diff options
Diffstat (limited to 'pkgs/applications/science/biology/dssp/default.nix')
| -rw-r--r-- | pkgs/applications/science/biology/dssp/default.nix | 21 |
1 files changed, 16 insertions, 5 deletions
diff --git a/pkgs/applications/science/biology/dssp/default.nix b/pkgs/applications/science/biology/dssp/default.nix index 1281643fe79..febfde548fd 100644 --- a/pkgs/applications/science/biology/dssp/default.nix +++ b/pkgs/applications/science/biology/dssp/default.nix @@ -1,31 +1,41 @@ { lib , stdenv , cmake +, eigen , fetchFromGitHub +, fetchpatch , libcifpp , libmcfp , zlib }: let libcifpp' = libcifpp.overrideAttrs (oldAttrs: { - # dssp 4.3.1 requires specific version "5.1.0" of libcifpp - version = "5.1.0"; + # dssp 4.4.3 requires specific version "5.2.0" of libcifpp + version = "5.2.0"; src = fetchFromGitHub { inherit (oldAttrs.src) owner repo rev; - hash = "sha256-PUsi4T6huSqwaa6RnBP1Vj+0a1ePrvrHD0641Lkkc5s="; + hash = "sha256-Sj10j6HxUoUvQ66cd2B8CO7CVBRd7w9CTovxkwPDOvs="; }; + patches = [ + (fetchpatch { + # https://github.com/PDB-REDO/libcifpp/issues/51 + name = "fix-build-on-darwin.patch"; + url = "https://github.com/PDB-REDO/libcifpp/commit/641f06a7e7c0dc54af242b373820f2398f59e7ac.patch"; + hash = "sha256-eWNfp9nA/+2J6xjZR6Tj+5OM3L5MxdfRi0nBzyaqvS0="; + }) + ]; }); in stdenv.mkDerivation (finalAttrs: { pname = "dssp"; - version = "4.4.2"; + version = "4.4.4.1"; src = fetchFromGitHub { owner = "PDB-REDO"; repo = "dssp"; rev = "refs/tags/v${finalAttrs.version}"; - hash = "sha256-Gic/rE/G24P5g4Uhf2lcvVa6i/4KGQzCpK4KlpjXcS0="; + hash = "sha256-sy6GBCnTGRD1YP00dKIolkr1RMboLGcd0f4kU8gCOnA="; }; nativeBuildInputs = [ @@ -33,6 +43,7 @@ stdenv.mkDerivation (finalAttrs: { ]; buildInputs = [ + eigen libcifpp' libmcfp zlib |