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{ lib
, stdenv
, cmake
, eigen
, fetchFromGitHub
, fetchpatch
, libcifpp
, libmcfp
, zlib
}:
let
libcifpp' = libcifpp.overrideAttrs (oldAttrs: {
# dssp 4.4.3 requires specific version "5.2.0" of libcifpp
version = "5.2.0";
src = fetchFromGitHub {
inherit (oldAttrs.src) owner repo rev;
hash = "sha256-Sj10j6HxUoUvQ66cd2B8CO7CVBRd7w9CTovxkwPDOvs=";
};
patches = [
(fetchpatch {
# https://github.com/PDB-REDO/libcifpp/issues/51
name = "fix-build-on-darwin.patch";
url = "https://github.com/PDB-REDO/libcifpp/commit/641f06a7e7c0dc54af242b373820f2398f59e7ac.patch";
hash = "sha256-eWNfp9nA/+2J6xjZR6Tj+5OM3L5MxdfRi0nBzyaqvS0=";
})
];
});
in
stdenv.mkDerivation (finalAttrs: {
pname = "dssp";
version = "4.4.4.1";
src = fetchFromGitHub {
owner = "PDB-REDO";
repo = "dssp";
rev = "refs/tags/v${finalAttrs.version}";
hash = "sha256-sy6GBCnTGRD1YP00dKIolkr1RMboLGcd0f4kU8gCOnA=";
};
nativeBuildInputs = [
cmake
];
buildInputs = [
eigen
libcifpp'
libmcfp
zlib
];
meta = with lib; {
description = "Calculate the most likely secondary structure assignment given the 3D structure of a protein";
homepage = "https://github.com/PDB-REDO/dssp";
changelog = "https://github.com/PDB-REDO/libcifpp/releases/tag/${finalAttrs.src.rev}";
license = licenses.bsd2;
maintainers = with maintainers; [ natsukium ];
platforms = platforms.unix;
};
})
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