summary refs log tree commit diff
path: root/pkgs/applications/science/biology
Commit message (Expand)AuthorAge
* python.pkgs wide: fix problematic urlsJonathan Ringer2020-01-10
* bayescan: init at 2.1 (#68191)Bruno Bzeznik2020-01-09
* blast: init at 2.10.0 (#61430)Luis Pedro Coelho2020-01-07
* last: 1042 -> 1045R. RyanTM2020-01-06
* Merge master into staging-nextFrederik Rietdijk2020-01-03
|\
| * Merge pull request #76208 from r-ryantm/auto-update/bcftoolsRyan Mulligan2020-01-02
| |\
| | * bcftools: 1.9 -> 1.10.2R. RyanTM2019-12-22
* | | Merge gcc-9 into staging (#68029)Frederik Rietdijk2019-12-30
|\ \ \
| * | | strelka: fix build w/ gcc9Franz Pletz2019-12-30
| * | | Merge remote-tracking branch 'origin/master' into gcc-9Franz Pletz2019-12-26
| |\ \ \ | | | |/ | | |/|
| * | | Merge remote-tracking branch 'origin/master' into gcc-9Franz Pletz2019-11-05
| |\ \ \
| * \ \ \ Merge remote-tracking branch 'origin/master' into gcc-9Franz Pletz2019-11-03
| |\ \ \ \
| * | | | | niftyreg: fix build with gcc9Franz Pletz2019-11-03
| * | | | | megahit: 1.1.4 -> 1.2.9Franz Pletz2019-11-02
* | | | | | treewide: replace make/build/configure/patchFlags with nix listsMerijn Broeren2019-12-30
| |_|_|_|/ |/| | | |
* | | | | Merge pull request #75900 from jbedo/tebreakFrederik Rietdijk2019-12-29
|\ \ \ \ \ | |_|_|_|/ |/| | | |
| * | | | tebreak: init at 1.0Justin Bedo2019-12-29
| * | | | minia: init at 3.2.1Justin Bedo2019-12-20
| * | | | last: init at 1042Justin Bedo2019-12-20
* | | | | bedtools: 2.29.1 -> 2.29.2Justin Bedo2019-12-18
|/ / / /
* | | | Merge pull request #75807 from jbedo/strelkaMario Rodas2019-12-16
|\ \ \ \
| * | | | strelka: fix broken buildJustin Bedo2019-12-17
* | | | | bedtools: fix clang buildsJustin Bedo2019-12-11
* | | | | bedtools: 2.29.0 -> 2.29.1Justin Bedo2019-12-10
|/ / / /
* | | | kssd: init at 1.0Renato Alves2019-12-08
* | | | svaba: init at 1.1.0scalavision2019-12-08
* | | | Merge pull request #75095 from tbenst/bftoolsMario Rodas2019-12-07
|\ \ \ \
| * | | | bftools: 5.9.2 -> 6.3.0Tyler Benster2019-12-06
* | | | | paml: 4.9i -> 4.9jR. RyanTM2019-12-01
* | | | | kallisto: 0.46.0 -> 0.46.1 (#74430)R. RyanTM2019-11-30
* | | | | picard-tools: 2.21.1 -> 2.21.3 (#74528)R. RyanTM2019-11-30
* | | | | hmmer: 3.2.1 -> 3.3R. RyanTM2019-11-27
|/ / / /
* | | | freebayes: 2017-08-23 -> 1.3.1 (2019-06-03)Kai Wohlfahrt2019-11-20
* | | | nifticlib and niftseg: change platform from linux to unix since these build o...Ben Darwin2019-11-14
| |_|/ |/| |
* | | deeptools: init at 3.3.1scalavision2019-11-04
| |/ |/|
* | star: 2.7.2b -> 2.7.3aR. RyanTM2019-11-03
|/
* EZminc: 2017-08-29 -> 2019-07-25; mark unbrokenBen Darwin2019-10-26
* truvari: init at 1.3.2 (#70877)scalavision2019-10-24
* picard-tools: 2.20.8 -> 2.21.1 (#71748)R. RyanTM2019-10-23
* dcm2niix: 1.0.20190410 -> 1.0.20190902R. RyanTM2019-10-22
* Merge pull request #69961 from r-ryantm/auto-update/starRenaud2019-10-13
|\
| * star: 2.7.1a -> 2.7.2bR. RyanTM2019-09-28
* | delly: init at 0.8.1 (#70871)scalavision2019-10-10
* | treewide: mark some broken packages as brokenLinus Heckemann2019-10-08
* | SPAdes: init at 3.13.1 (#63082)Bruno Bzeznik2019-10-03
* | Merge pull request #69735 from r-ryantm/auto-update/picard-toolsRyan Mulligan2019-09-29
|\ \
| * | picard-tools: 2.20.5 -> 2.20.8R. RyanTM2019-09-27
| |/
* | Merge pull request #63117 from bzizou/macseAaron Andersen2019-09-27
|\ \ | |/ |/|
| * macse: init at 2.03Bruno Bzeznik2019-09-24
* | maintainer: mimadrid: update github username and personal dataMiguel Madrid MencĂ­a2019-09-14