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{ lib
, buildPythonPackage
, fetchFromGitHub
, isPy27
, numpy
, scipy
, pytestCheckHook
, pytest-cov
, pytest-timeout
, h5py
, matplotlib
, nibabel
, pandas
, scikit-learn
}:
buildPythonPackage rec {
pname = "mne-python";
version = "0.23.0";
disabled = isPy27;
# PyPI dist insufficient to run tests
src = fetchFromGitHub {
owner = "mne-tools";
repo = pname;
rev = "v${version}";
sha256 = "02fcnfsrc6sccv6x2rnx86g0zw0ivk5s8gx230g6pxfg3lap6knv";
};
propagatedBuildInputs = [ numpy scipy ];
# all tests pass, but Pytest hangs afterwards - probably some thread hasn't terminated
doCheck = false;
checkInputs = [
pytestCheckHook
pytest-cov
pytest-timeout
h5py
matplotlib
nibabel
pandas
scikit-learn
];
preCheck = ''
export HOME=$TMP
export MNE_SKIP_TESTING_DATASET_TESTS=true
export MNE_SKIP_NETWORK_TESTS=1
'';
pythonImportsCheck = [ "mne" ];
meta = with lib; {
homepage = "https://mne.tools";
description = "Magnetoencephelography and electroencephalography in Python";
license = licenses.bsd3;
maintainers = with maintainers; [ bcdarwin ];
};
}
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