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{ lib
, buildPythonPackage
, fetchFromGitHub
, numpy
, scipy
, pytestCheckHook
, pytest-timeout
, h5py
, matplotlib
, nibabel
, pandas
, scikit-learn
, decorator
, jinja2
, pooch
, tqdm
, setuptools
, pythonOlder
}:
buildPythonPackage rec {
pname = "mne-python";
version = "1.3.1";
format = "setuptools";
disabled = pythonOlder "3.7";
src = fetchFromGitHub {
owner = "mne-tools";
repo = pname;
rev = "refs/tags/v${version}";
hash = "sha256-jvrk6m1Cd5ig2LXq6sAIbHDhmtG1gH/7WNAc7oet+tg=";
};
propagatedBuildInputs = [
decorator
jinja2
matplotlib
numpy
pooch
scipy
setuptools
tqdm
];
nativeCheckInputs = [
h5py
nibabel
pandas
pytestCheckHook
scikit-learn
pytest-timeout
];
preCheck = ''
export HOME=$TMP
export MNE_SKIP_TESTING_DATASET_TESTS=true
export MNE_SKIP_NETWORK_TESTS=1
'';
# All tests pass, but Pytest hangs afterwards - probably some thread hasn't terminated
doCheck = false;
pythonImportsCheck = [
"mne"
];
meta = with lib; {
description = "Magnetoencephelography and electroencephalography in Python";
homepage = "https://mne.tools";
license = licenses.bsd3;
maintainers = with maintainers; [ bcdarwin ];
};
}
|