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{ lib
, buildPythonPackage
, fetchFromGitHub
, pythonOlder
, pytestCheckHook
, atpublic
, cached-property
, clickhouse-driver
, click
, dask
, graphviz
, importlib-metadata
, multipledispatch
, numpy
, pandas
, parsy
, poetry-core
, pyarrow
, pytest
, pytest-mock
, pytest-xdist
, pytz
, regex
, requests
, sqlalchemy
, tables
, toolz
}:
let
# ignore tests for which dependencies are not available
backends = [
"csv"
"dask"
"hdf5"
"pandas"
"parquet"
"sqlite"
];
backendsString = lib.concatStringsSep " " backends;
ibisTestingData = fetchFromGitHub {
owner = "ibis-project";
repo = "testing-data";
rev = "743201a35c6b968cf55b054f9d28949ea15d1f0a";
sha256 = "sha256-xuSE6wHP3aF8lnEE2SuFbTRBu49ecRmc1F3HPcszptI=";
};
in
buildPythonPackage rec {
pname = "ibis-framework";
version = "2.1.1";
format = "pyproject";
disabled = pythonOlder "3.7";
src = fetchFromGitHub {
repo = "ibis";
owner = "ibis-project";
rev = version;
sha256 = "sha256-n3fR6wvcSfIo7760seB+5SxtoYSqQmqkzZ9VlNQF200=";
};
nativeBuildInputs = [ poetry-core ];
propagatedBuildInputs = [
atpublic
cached-property
clickhouse-driver
dask
graphviz
multipledispatch
numpy
pandas
parsy
pyarrow
pytz
regex
requests
sqlalchemy
tables
toolz
] ++ lib.optionals (pythonOlder "3.8" && lib.versionOlder version "3.0.0") [
importlib-metadata
];
checkInputs = [
pytestCheckHook
click
pytest
pytest-mock
pytest-xdist
];
postPatch = ''
substituteInPlace pyproject.toml \
--replace 'atpublic = ">=2.3,<3"' 'atpublic = ">=2.3"'
'';
preBuild = ''
# setup.py exists only for developer convenience and is automatically generated
rm setup.py
'';
disabledTests = [
# These tests are broken upstream: https://github.com/ibis-project/ibis/issues/3291
"test_summary_numeric"
"test_summary_non_numeric"
"test_batting_most_hits"
"test_join_with_window_function"
"test_where_long"
"test_quantile_groupby"
"test_summary_numeric"
"test_summary_numeric_group_by"
"test_summary_non_numeric"
"test_searched_case_column"
"test_simple_case_column"
"test_summary_non_numeric_group_by"
];
pytestFlagsArray = [
"ibis/tests"
"ibis/backends/tests"
"ibis/backends/{${lib.concatStringsSep "," backends}}/tests"
];
preCheck = ''
set -euo pipefail
export IBIS_TEST_DATA_DIRECTORY
IBIS_TEST_DATA_DIRECTORY="$(mktemp -d)"
# copy the test data to a writable directory
cp -r ${ibisTestingData}/* "$IBIS_TEST_DATA_DIRECTORY"
find "$IBIS_TEST_DATA_DIRECTORY" -type d -exec chmod u+rwx {} +
find "$IBIS_TEST_DATA_DIRECTORY" -type f -exec chmod u+rw {} +
# load data
for backend in ${backendsString}; do
python ci/datamgr.py "$backend" &
done
wait
'' + lib.optionalString (lib.versionOlder version "3.0.0") ''
export PYTEST_BACKENDS="${backendsString}"
'';
pythonImportsCheck = [
"ibis"
] ++ (map (backend: "ibis.backends.${backend}") backends);
meta = with lib; {
description = "Productivity-centric Python Big Data Framework";
homepage = "https://github.com/ibis-project/ibis";
license = licenses.asl20;
maintainers = with maintainers; [ costrouc cpcloud ];
};
}
|