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{ lib, stdenv, gtest, fetchFromGitHub, cmake, boost, eigen, python, vtk, zlib, tbb }:
stdenv.mkDerivation rec {
version = "2.0.0";
pname = "mirtk";
src = fetchFromGitHub {
owner = "BioMedIA";
repo = "MIRTK";
rev = "v${version}";
sha256 = "0i2v97m66ir5myvi5b123r7zcagwy551b73s984gk7lksl5yiqxk";
fetchSubmodules = true;
};
cmakeFlags = [
"-DWITH_VTK=ON"
"-DBUILD_ALL_MODULES=ON"
"-DWITH_TBB=ON"
];
doCheck = true;
checkPhase = ''
ctest -E '(Polynomial|ConvolutionFunction|Downsampling|EdgeTable|InterpolateExtrapolateImage)'
'';
# testPolynomial - segfaults for some reason
# testConvolutionFunction, testDownsampling - main not called correctly
# testEdgeTable, testInterpolateExtrapolateImageFunction - setup fails
postInstall = ''
install -Dm644 -t "$out/share/bash-completion/completions/mirtk" share/completion/bash/mirtk
'';
nativeBuildInputs = [ cmake gtest ];
buildInputs = [ boost eigen python vtk zlib tbb ];
meta = with lib; {
homepage = "https://github.com/BioMedIA/MIRTK";
description = "Medical image registration library and tools";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.linux;
license = licenses.asl20;
};
}
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