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{ sage-src
, env-locations
, python
, buildPythonPackage
, m4
, perl
, pkg-config
, sage-setup
, gd
, iml
, libpng
, readline
, arb
, blas
, boost
, brial
, cliquer
, eclib
, ecm
, fflas-ffpack
, flint
, gap
, giac
, givaro
, glpk
, gsl
, lapack
, lcalc
, libbraiding
, libhomfly
, libmpc
, linbox
, lisp-compiler
, lrcalc
, m4ri
, m4rie
, mpfi
, mpfr
, ntl
, pari
, planarity
, ppl
, rankwidth
, ratpoints
, singular
, sqlite
, symmetrica
, cvxopt
, cypari2
, cysignals
, cython
, fpylll
, gmpy2
, importlib-metadata
, importlib-resources
, ipykernel
, ipython
, ipywidgets
, jinja2
, jupyter-client
, jupyter-core
, lrcalc-python
, matplotlib
, memory-allocator
, mpmath
, networkx
, numpy
, pexpect
, pillow
, pip
, pkgconfig
, pplpy
, primecountpy
, ptyprocess
, requests
, rpy2
, scipy
, sphinx
, sympy
, typing-extensions
}:
assert (!blas.isILP64) && (!lapack.isILP64);
# This is the core sage python package. Everything else is just wrappers gluing
# stuff together. It is not very useful on its own though, since it will not
# find many of its dependencies without `sage-env`, will not be tested without
# `sage-tests` and will not have html docs without `sagedoc`.
buildPythonPackage rec {
version = src.version;
pname = "sagelib";
src = sage-src;
nativeBuildInputs = [
iml
lisp-compiler
m4
perl
pip # needed to query installed packages
pkg-config
sage-setup
];
buildInputs = [
gd
iml
libpng
readline
];
propagatedBuildInputs = [
# native dependencies (TODO: determine which ones need to be propagated)
arb
blas
boost
brial
cliquer
eclib
ecm
fflas-ffpack
flint
gap
giac
givaro
glpk
gsl
lapack
lcalc
libbraiding
libhomfly
libmpc
linbox
lisp-compiler
lrcalc
m4ri
m4rie
mpfi
mpfr
ntl
pari
planarity
ppl
rankwidth
ratpoints
singular
sqlite
symmetrica
# from src/sage/setup.cfg and requirements.txt
cvxopt
cypari2
cysignals
cython
fpylll
gmpy2
importlib-metadata
importlib-resources
ipykernel
ipython
ipywidgets
jinja2
jupyter-client
jupyter-core
lrcalc-python
matplotlib
memory-allocator
mpmath
networkx
numpy
pexpect
pillow
pip
pkgconfig
pplpy
primecountpy
ptyprocess
requests
rpy2
scipy
sphinx
sympy
typing-extensions
];
preBuild = ''
export SAGE_ROOT="$PWD"
export SAGE_LOCAL="$SAGE_ROOT"
export SAGE_SHARE="$SAGE_LOCAL/share"
# set locations of dependencies (needed for nbextensions like threejs)
. ${env-locations}/sage-env-locations
export JUPYTER_PATH="$SAGE_LOCAL/jupyter"
export PATH="$SAGE_ROOT/build/bin:$SAGE_ROOT/src/bin:$PATH"
export SAGE_NUM_THREADS="$NIX_BUILD_CORES"
mkdir -p "$SAGE_SHARE/sage/ext/notebook-ipython"
mkdir -p "var/lib/sage/installed"
cd build/pkgs/sagelib
# some files, like Pipfile, pyproject.toml, requirements.txt and setup.cfg
# are generated by the bootstrap script using m4. these can fetch data from
# build/pkgs, either directly or via sage-get-system-packages.
sed -i '/sage_conf/d' src/setup.cfg.m4
sed -i '/sage_conf/d' src/requirements.txt.m4
# version lower bounds are useful, but upper bounds are a hassle because
# Sage tests already catch any relevant API breakage.
# according to the discussion at https://trac.sagemath.org/ticket/33520,
# upper bounds will be less noisy starting from Sage 9.6.
sed -i 's/==0.5.1/>=0.5.1/' ../ptyprocess/install-requires.txt
sed -i 's/, <[^, ]*//' ../*/install-requires.txt
for infile in src/*.m4; do
if [ -f "$infile" ]; then
outfile="src/$(basename $infile .m4)"
m4 "$infile" > "$outfile"
fi
done
cd src
'';
postInstall = ''
rm -r "$out/${python.sitePackages}/sage/cython_debug"
'';
doCheck = false; # we will run tests in sage-tests.nix
}
|