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{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper, perlPackages, libminc }:
stdenv.mkDerivation rec {
pname = "mni_autoreg";
version = "unstable-2022-05-20";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "be7bd25bf7776974e0f2c1d90b6e7f8ccc0c8874";
sha256 = "sGMZbCrdV6yAOgGiqvBFOUr6pGlTCqwy8yNrPxMoKco=";
};
nativeBuildInputs = [ cmake makeWrapper ];
buildInputs = [ libminc ];
propagatedBuildInputs = with perlPackages; [ perl GetoptTabular MNI-Perllib ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" ];
# testing broken: './minc_wrapper: Permission denied' from Testing/ellipse0.mnc
postFixup = ''
for prog in autocrop mritoself mritotal xfmtool; do
echo $out/bin/$prog
wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB;
done
'';
meta = with lib; {
homepage = "https://github.com/BIC-MNI/mni_autoreg";
description = "Tools for automated registration using the MINC image format";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
};
}
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