diff options
Diffstat (limited to 'pkgs/development/python-modules/sunpy/default.nix')
-rw-r--r-- | pkgs/development/python-modules/sunpy/default.nix | 99 |
1 files changed, 64 insertions, 35 deletions
diff --git a/pkgs/development/python-modules/sunpy/default.nix b/pkgs/development/python-modules/sunpy/default.nix index 8f1653d91ab..78c5665d102 100644 --- a/pkgs/development/python-modules/sunpy/default.nix +++ b/pkgs/development/python-modules/sunpy/default.nix @@ -1,44 +1,44 @@ { lib , stdenv -, buildPythonPackage -, fetchPypi -, pythonOlder , asdf , astropy -, setuptools-scm -, astropy-helpers , astropy-extension-helpers +, astropy-helpers , beautifulsoup4 +, buildPythonPackage , drms +, fetchPypi , glymur , h5netcdf , hypothesis +, lxml , matplotlib , numpy , pandas , parfive -, pytestCheckHook , pytest-astropy +, pytestCheckHook , pytest-mock , python-dateutil +, pythonOlder , scikitimage , scipy +, setuptools-scm , sqlalchemy -, towncrier , tqdm , zeep }: buildPythonPackage rec { pname = "sunpy"; - version = "3.1.6"; + version = "4.0.0"; format = "setuptools"; - disabled = pythonOlder "3.6"; + disabled = pythonOlder "3.8"; src = fetchPypi { inherit pname version; - sha256 = "sha256-mI5W4EDzTk3GryTQbnmvP+ks3VJDzw4drew9wD9+tIE="; + hash = "sha256-01eGYls8eE2e3vzDYXz5D1xQs7pxpmHt89aBKCvVdLg="; }; nativeBuildInputs = [ @@ -47,32 +47,59 @@ buildPythonPackage rec { ]; propagatedBuildInputs = [ - asdf astropy astropy-helpers - beautifulsoup4 - drms - glymur - h5netcdf - matplotlib numpy - pandas parfive - python-dateutil - scikitimage - scipy - sqlalchemy - towncrier - tqdm - zeep ]; + passthru.optional-dependencies = { + asdf = [ + asdf + # asdf-astropy + ]; + database = [ + sqlalchemy + ]; + image = [ + scikitimage + scipy + ]; + net = [ + beautifulsoup4 + drms + python-dateutil + tqdm + zeep + ]; + jpeg2000 = [ + glymur + lxml + ]; + timeseries = [ + # cdflib + h5netcdf + # h5py + matplotlib + pandas + ]; + }; + checkInputs = [ hypothesis pytest-astropy pytest-mock pytestCheckHook - ]; + ] ++ passthru.optional-dependencies.asdf + ++ passthru.optional-dependencies.database + ++ passthru.optional-dependencies.image + ++ passthru.optional-dependencies.net + ++ passthru.optional-dependencies.timeseries; + + postPatch = '' + substituteInPlace setup.cfg \ + --replace " --dist no" "" + ''; # darwin has write permission issues doCheck = stdenv.isLinux; @@ -86,18 +113,16 @@ buildPythonPackage rec { "test_sunpy_warnings_logging" "test_main_nonexisting_module" "test_main_stdlib_module" + "test_find_dependencies" ]; disabledTestPaths = [ - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/helioprojective-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/heliocentric-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/heliographic_carrington-*.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/geocentricearthequatorial-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/geocentricsolarecliptic-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/heliocentricearthecliptic-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/coordinates/frames/heliocentricinertial-1.0.0.yaml" - "sunpy/io/special/asdf/schemas/sunpy.org/sunpy/map/generic_map-1.0.0.yaml" - # requires mpl-animators package + # Tests are very slow + "sunpy/net/tests/test_fido.py" + # asdf.extensions plugin issue + "sunpy/io/special/asdf/resources/schemas/" + "sunpy/io/special/asdf/resources/manifests/sunpy-1.0.0.yaml" + # Requires mpl-animators package "sunpy/map/tests/test_compositemap.py" "sunpy/map/tests/test_mapbase.py" "sunpy/map/tests/test_mapsequence.py" @@ -109,8 +134,12 @@ buildPythonPackage rec { "sunpy/visualization/animator/tests/test_mapsequenceanimator.py" "sunpy/visualization/animator/tests/test_wcs.py" "sunpy/visualization/colormaps/tests/test_cm.py" - # requires cdflib package + # Requires cdflib package "sunpy/timeseries/tests/test_timeseries_factory.py" + # Requires jplephem + "sunpy/image/tests/test_transform.py" + "sunpy/io/special/asdf/tests/test_coordinate_frames.py" + "sunpy/io/special/asdf/tests/test_genericmap.py" # distutils is deprecated "sunpy/io/setup_package.py" ]; |