diff options
Diffstat (limited to 'pkgs/development/libraries/science/biology/elastix')
-rw-r--r-- | pkgs/development/libraries/science/biology/elastix/default.nix | 22 |
1 files changed, 8 insertions, 14 deletions
diff --git a/pkgs/development/libraries/science/biology/elastix/default.nix b/pkgs/development/libraries/science/biology/elastix/default.nix index 4d98b12928f..55ee5ab4fb6 100644 --- a/pkgs/development/libraries/science/biology/elastix/default.nix +++ b/pkgs/development/libraries/science/biology/elastix/default.nix @@ -1,32 +1,26 @@ -{ stdenv, fetchFromGitHub, fetchpatch, cmake, itk, python3 }: +{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake, itk, python3, Cocoa }: stdenv.mkDerivation rec { pname = "elastix"; - version = "5.0.0"; + version = "5.0.1"; src = fetchFromGitHub { owner = "SuperElastix"; repo = pname; rev = version; - sha256 = "1zrl7rz4lwsx88b2shnl985f3a97lmp4ksbd437h9y0hfjq8l0lj"; + sha256 = "1mx8kkak2d3ibfrxrh8jkmh2zkdlgl9h578wiw3617zcwaa97bxw"; }; patches = [ (fetchpatch { - name = "itk-5.1-compat.patch"; - url = "https://github.com/SuperElastix/elastix/commit/402e9a26f22f805b8f2db00c00e59f75fa1783ad.patch"; - sha256 = "1il6gc1lgy78i0w6gkkppr61nh6g0yjspbfk19hcz20778m5jhz9"; - }) - (fetchpatch { - name = "fix-osx-build.patch"; - url = "https://github.com/SuperElastix/elastix/commit/52e1dc3928046f9fbb85d4b2ecd0d5175fa9695d.patch"; - sha256 = "1hf7kgx1jv497pf0x5wj79sy1wncxcvhrkix9w086lcr8zwxvn9q"; + name = "install-executables.patch"; # https://github.com/SuperElastix/elastix/issues/305 + url = "https://github.com/SuperElastix/elastix/commit/8e26cdc0d66f6030c7be085fdc424d84d4fc7546.patch"; + sha256 = "12y9wbpi9jlarnw6fk4iby97jxvx5g4daq9zqblbcmn51r134bj5"; }) ]; - nativeBuildInputs = [ cmake python3 ]; - buildInputs = [ itk ]; + buildInputs = [ itk ] ++ lib.optionals stdenv.isDarwin [ Cocoa ]; doCheck = !stdenv.isDarwin; # usual dynamic linker issues @@ -34,7 +28,7 @@ stdenv.mkDerivation rec { export LD_LIBRARY_PATH=$(pwd)/bin "; - meta = with stdenv.lib; { + meta = with lib; { homepage = "http://elastix.isi.uu.nl/"; description = "Image registration toolkit based on ITK"; maintainers = with maintainers; [ bcdarwin ]; |