diff options
Diffstat (limited to 'pkgs/applications/science/biology/bowtie2/default.nix')
-rw-r--r-- | pkgs/applications/science/biology/bowtie2/default.nix | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/bowtie2/default.nix b/pkgs/applications/science/biology/bowtie2/default.nix new file mode 100644 index 00000000000..05a85cafedf --- /dev/null +++ b/pkgs/applications/science/biology/bowtie2/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchFromGitHub, zlib, tbb }: + +stdenv.mkDerivation rec { + pname = "bowtie2"; + version = "2.3.3.1"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "BenLangmead"; + repo = pname; + rev = "v${version}"; + sha256 = "1pcyks76bnnkq6h0gqjw4fkdddjjnw7k5ibim7ajkbvfw58a99y0"; + }; + + buildInputs = [ zlib tbb ]; + + installFlags = [ "prefix=$(out)" ]; + + meta = with stdenv.lib; { + description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences"; + license = licenses.gpl3; + homepage = http://bowtie-bio.sf.net/bowtie2; + maintainers = with maintainers; [ rybern ]; + platforms = platforms.all; + }; +} |