diff options
| -rw-r--r-- | pkgs/applications/science/biology/sambamba/default.nix | 24 |
1 files changed, 12 insertions, 12 deletions
diff --git a/pkgs/applications/science/biology/sambamba/default.nix b/pkgs/applications/science/biology/sambamba/default.nix index 03ee40013c7..36e950a1812 100644 --- a/pkgs/applications/science/biology/sambamba/default.nix +++ b/pkgs/applications/science/biology/sambamba/default.nix @@ -1,27 +1,27 @@ -{ lib, stdenv, fetchFromGitHub, fetchpatch, python3, which, ldc, zlib }: +{ lib +, stdenv +, fetchFromGitHub +, python3 +, which +, ldc +, zlib +, lz4 +}: stdenv.mkDerivation rec { pname = "sambamba"; - version = "0.8.1"; + version = "0.8.2"; src = fetchFromGitHub { owner = "biod"; repo = "sambamba"; rev = "v${version}"; - sha256 = "0f4qngnys2zjb0ri54k6kxqnssg938mnnscs4z9713hjn41rk7yd"; + sha256 = "sha256-FEa9QjQoGNUOAtMNMZcqpTKMKVtXoBuOomTy0mpos/0="; fetchSubmodules = true; }; - patches = [ - # make ldc 1.27.1 compatible - (fetchpatch { - url = "https://github.com/biod/sambamba/pull/480/commits/b5c80feb62683d24ec0529f685a1d7a36962a1d4.patch"; - sha256 = "0yr9baxqbhyb4scwcwczk77z8gazhkl60jllhz9dnrb7p5qsvs7r"; - }) - ]; - nativeBuildInputs = [ which python3 ldc ]; - buildInputs = [ zlib ]; + buildInputs = [ zlib lz4 ]; # Upstream's install target is broken; copy manually installPhase = '' |