Merge Python patch updates into staging

93 files changed, 190 insertions, 199 deletions

diff --git a/pkgs/development/python-modules/Cython/default.nix b/pkgs/development/python-modules/Cython/default.nix
index de5eaea842b..53e9ec270ac 100644
--- a/pkgs/development/python-modules/Cython/default.nix
+++ b/pkgs/development/python-modules/Cython/default.nix
@@ -25,11 +25,11 @@ let
 
 in buildPythonPackage rec {
   pname = "Cython";
-  version = "0.28.3";
+  version = "0.28.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1aae6d6e9858888144cea147eb5e677830f45faaff3d305d77378c3cba55f526";
+    sha256 = "b64575241f64f6ec005a4d4137339fb0ba5e156e826db2fdb5f458060d9979e0";
   };
 
   nativeBuildInputs = [
@@ -50,15 +50,6 @@ in buildPythonPackage rec {
 
   doCheck = !stdenv.isDarwin;
 
-  patches = [
-    # The following is in GitHub in 0.28.3 but not in the `sdist`.
-    # https://github.com/cython/cython/issues/2319
-    (fetchpatch {
-      url = https://github.com/cython/cython/commit/c485b1b77264c3c75d090a3c526de24966830d42.patch;
-      sha256 = "1p6jj9rb097kqvhs5j5127sj5zy18l7x9v0p478cjyzh41khh9r0";
-    })
-  ];
-
   meta = {
     description = "An optimising static compiler for both the Python programming language and the extended Cython programming language";
     homepage = http://cython.org;
diff --git a/pkgs/development/python-modules/Theano/default.nix b/pkgs/development/python-modules/Theano/default.nix
index 793488f0b13..a9799807a27 100644
--- a/pkgs/development/python-modules/Theano/default.nix
+++ b/pkgs/development/python-modules/Theano/default.nix
@@ -45,13 +45,13 @@ let
 
 in buildPythonPackage rec {
   pname = "Theano";
-  version = "1.0.2";
+  version = "1.0.3";
 
   disabled = isPyPy || pythonOlder "2.6" || (isPy3k && pythonOlder "3.3");
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6768e003d328a17011e6fca9126fbb8a6ffd3bb13cb21c450f3e724cca29abde";
+    sha256 = "637f3b34d40ef5e0d54dd4c40618475aaa085c26d2491e925c98e2ad4bc2115a";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/alabaster/default.nix b/pkgs/development/python-modules/alabaster/default.nix
index a2a35f852a3..e5aaa9a6c76 100644
--- a/pkgs/development/python-modules/alabaster/default.nix
+++ b/pkgs/development/python-modules/alabaster/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "alabaster";
-  version = "0.7.11";
+  version = "0.7.12";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b63b1f4dc77c074d386752ec4a8a7517600f6c0db8cd42980cae17ab7b3275d7";
+    sha256 = "a661d72d58e6ea8a57f7a86e37d86716863ee5e92788398526d58b26a4e4dc02";
   };
 
   propagatedBuildInputs = [ pygments ];
diff --git a/pkgs/development/python-modules/autobahn/default.nix b/pkgs/development/python-modules/autobahn/default.nix
index f618b05373a..01922f98c40 100644
--- a/pkgs/development/python-modules/autobahn/default.nix
+++ b/pkgs/development/python-modules/autobahn/default.nix
@@ -4,11 +4,11 @@
 }:
 buildPythonPackage rec {
   pname = "autobahn";
-  version = "18.8.1";
+  version = "18.8.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "b69858e0be4bff8437b0bd82a0db1cbef7405e16bd9354ba587c043d6d5e1ad9";
+    sha256 = "448df2e241011ea2948799918930042d81e63d26b01912c472f5a9a37f42f319";
   };
 
   propagatedBuildInputs = [ six txaio twisted zope_interface cffi ] ++
diff --git a/pkgs/development/python-modules/beancount/default.nix b/pkgs/development/python-modules/beancount/default.nix
index 195a1ccad76..1a005d9e42d 100644
--- a/pkgs/development/python-modules/beancount/default.nix
+++ b/pkgs/development/python-modules/beancount/default.nix
@@ -4,14 +4,14 @@
 , nose, requests }:
 
 buildPythonPackage rec {
-  version = "2.1.2";
+  version = "2.1.3";
   pname = "beancount";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d0d5f7088cb6b699cc4d030dad42d20b8228232cdb445bb1330d4ef5e3581f52";
+    sha256 = "4b7b0d3633c82ca88d3cb3d31ad2fd2e45a42401cfa94eaa1cb938ffece34f22";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/bootstrapped-pip/default.nix b/pkgs/development/python-modules/bootstrapped-pip/default.nix
index 613be1f7d6b..d482b7a8c88 100644
--- a/pkgs/development/python-modules/bootstrapped-pip/default.nix
+++ b/pkgs/development/python-modules/bootstrapped-pip/default.nix
@@ -3,26 +3,26 @@
 let
   wheel_source = fetchPypi {
     pname = "wheel";
-    version = "0.31.1";
+    version = "0.32.1";
     format = "wheel";
-    sha256 = "80044e51ec5bbf6c894ba0bc48d26a8c20a9ba629f4ca19ea26ecfcf87685f5f";
+    sha256 = "15hizylh761jcaz8zfdc3wg30jf33izaakyv1p82ppx2y5rgg8cz";
   };
   setuptools_source = fetchPypi {
     pname = "setuptools";
-    version = "40.2.0";
+    version = "40.4.3";
     format = "wheel";
-    sha256 = "ea3796a48a207b46ea36a9d26de4d0cc87c953a683a7b314ea65d666930ea8e6";
+    sha256 = "1zzryv1fqx4nk7hzv4afxpl8k7f60lc0qkhxlc8sqjs4igakfhff";
   };
 
 in stdenv.mkDerivation rec {
   pname = "pip";
-  version = "18.0";
+  version = "18.1";
   name = "${python.libPrefix}-bootstrapped-${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
     format = "wheel";
-    sha256 = "070e4bf493c7c2c9f6a08dd797dd3c066d64074c38e9e8a0fb4e6541f266d96c";
+    sha256 = "7909d0a0932e88ea53a7014dfd14522ffef91a464daaaf5c573343852ef98550";
   };
 
   unpackPhase = ''
diff --git a/pkgs/development/python-modules/buildout-nix/default.nix b/pkgs/development/python-modules/buildout-nix/default.nix
index 5a1bc4485b7..c76a930c965 100644
--- a/pkgs/development/python-modules/buildout-nix/default.nix
+++ b/pkgs/development/python-modules/buildout-nix/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "zc.buildout";
-  version = "2.12.1";
+  version = "2.12.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1e180b62fd129a68cb3a9ec8eb0ef457e18921269a93e87ef2cc34519415332d";
+    sha256 = "ff5d7e8a1361da8dfe1025d35ef6ce55e929dd8518d2a811a1cf2c948950a043";
   };
 
   patches = [ ./nix.patch ];
diff --git a/pkgs/development/python-modules/buildout/default.nix b/pkgs/development/python-modules/buildout/default.nix
index c75b9fdb6cc..ede09373f90 100644
--- a/pkgs/development/python-modules/buildout/default.nix
+++ b/pkgs/development/python-modules/buildout/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "zc.buildout";
-  version = "2.12.1";
+  version = "2.12.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1e180b62fd129a68cb3a9ec8eb0ef457e18921269a93e87ef2cc34519415332d";
+    sha256 = "ff5d7e8a1361da8dfe1025d35ef6ce55e929dd8518d2a811a1cf2c948950a043";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/bumps/default.nix b/pkgs/development/python-modules/bumps/default.nix
index 469b449483a..d8fc3d99235 100644
--- a/pkgs/development/python-modules/bumps/default.nix
+++ b/pkgs/development/python-modules/bumps/default.nix
@@ -2,7 +2,7 @@
 
 buildPythonPackage rec {
   pname = "bumps";
-  version = "0.7.10";
+  version = "0.7.11";
 
   propagatedBuildInputs = [six];
 
@@ -12,7 +12,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07917abf7e598f2a42456ca4f704c6da2a5489eaea0b9a7c61ed8a26506737c8";
+    sha256 = "16d24a7f965592d9b02f96e68e6aa70d6fb59abe4db37bb14c4b60c509a3c2ef";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/carbon/default.nix b/pkgs/development/python-modules/carbon/default.nix
index df14f44f0b0..0398782900d 100644
--- a/pkgs/development/python-modules/carbon/default.nix
+++ b/pkgs/development/python-modules/carbon/default.nix
@@ -4,13 +4,13 @@
 
 buildPythonPackage rec {
   pname = "carbon";
-  version = "1.1.3";
+  version = "1.1.4";
 
   disabled = isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1s7327p30w4l9ak4gc7m5ga521233179n2lr3j0ggfbmfhd6blky";
+    sha256 = "1b70e34ac0f0bd32a03ee14eaf1ed2c857e208984fc9761f59a95c21c5264513";
   };
 
   propagatedBuildInputs = [ twisted whisper txamqp cachetools urllib3 ];
diff --git a/pkgs/development/python-modules/click-plugins/default.nix b/pkgs/development/python-modules/click-plugins/default.nix
index 74d64d8390c..a5124ac8613 100644
--- a/pkgs/development/python-modules/click-plugins/default.nix
+++ b/pkgs/development/python-modules/click-plugins/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "click-plugins";
-  version = "1.0.3";
+  version = "1.0.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1ifphgaw5mmcdnqd0qfnmrbm62q3k6p573aff4cxgpyjxmz5xk3s";
+    sha256 = "dfed74b5063546a137de99baaaf742b4de4337ad2b3e1df5ec7c8a256adc0847";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/cloudpickle/default.nix b/pkgs/development/python-modules/cloudpickle/default.nix
index f70ebee411a..b00d210a464 100644
--- a/pkgs/development/python-modules/cloudpickle/default.nix
+++ b/pkgs/development/python-modules/cloudpickle/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "cloudpickle";
-  version = "0.5.5";
+  version = "0.5.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6ea4b548f61a4f616b065182716318c7dced8c053517f35ac59cec22802daf3d";
+    sha256 = "0390ecb3731ac035d74c34651460f4a683e9ef7443861712b8d56c20c2f92113";
   };
 
   buildInputs = [ pytest mock ];
diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix
index 9a836e88752..f9f400408a7 100644
--- a/pkgs/development/python-modules/cupy/default.nix
+++ b/pkgs/development/python-modules/cupy/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "cupy";
-  version = "4.4.0";
+  version = "4.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fca0e3d3fdad4c825197ea421bed0d253224b44daf738d82af5cba856c1c0b3e";
+    sha256 = "d46a3eea628a17b9c3f446e4b13513a1f0cc0b9930214417b41c90dcf0bb427f";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/cvxopt/default.nix b/pkgs/development/python-modules/cvxopt/default.nix
index e17bd38da02..f0de39edd0d 100644
--- a/pkgs/development/python-modules/cvxopt/default.nix
+++ b/pkgs/development/python-modules/cvxopt/default.nix
@@ -15,13 +15,13 @@
 
 buildPythonPackage rec {
   pname = "cvxopt";
-  version = "1.2.0";
+  version = "1.2.1";
 
   disabled = isPyPy; # hangs at [translation:info]
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3296c9d49b7dcb894b20db5d7d1c1a443912b4d82358e03f836575e8398e0d60";
+    sha256 = "12e3cfda982576b0b9b597d297aaf3172efa765a20fbed6f3c066aa0c48ee817";
   };
 
   # similar to Gsl, glpk, fftw there is also a dsdp interface
diff --git a/pkgs/development/python-modules/dask-image/default.nix b/pkgs/development/python-modules/dask-image/default.nix
index 15a13b2ff71..ed576bcc02b 100644
--- a/pkgs/development/python-modules/dask-image/default.nix
+++ b/pkgs/development/python-modules/dask-image/default.nix
@@ -10,12 +10,12 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.1.1";
+  version = "0.1.2";
   pname = "dask-image";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e6294ac577a8fc0abec2b97a2c42d404f599feac61d6899bdf1bf2b7cfb0e015";
+    sha256 = "401e2c345a582eb2859a4a2a4a6fcfbc85beece59705f3ead9b6708a0cd183e7";
   };
 
   checkInputs = [ pytest scikitimage ];
diff --git a/pkgs/development/python-modules/deprecation/default.nix b/pkgs/development/python-modules/deprecation/default.nix
index 10e0d79dddf..600fe888751 100644
--- a/pkgs/development/python-modules/deprecation/default.nix
+++ b/pkgs/development/python-modules/deprecation/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "deprecation";
-  version = "2.0.5";
+  version = "2.0.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "cbe7d15006bc339709be5e02b14884ecc479639c1a3714a908de3a8ca13b5ca9";
+    sha256 = "68071e5ae7cd7e9da6c7dffd750922be4825c7c3a6780d29314076009cc39c35";
   };
 
   propagatedBuildInputs = [ packaging ];
diff --git a/pkgs/development/python-modules/distributed/default.nix b/pkgs/development/python-modules/distributed/default.nix
index 694bc2ce4f9..65d0b1ab77f 100644
--- a/pkgs/development/python-modules/distributed/default.nix
+++ b/pkgs/development/python-modules/distributed/default.nix
@@ -26,12 +26,12 @@
 
 buildPythonPackage rec {
   pname = "distributed";
-  version = "1.23.1";
+  version = "1.23.3";
 
   # get full repository need conftest.py to run tests
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9d4693442efe40e05e4304fe6d8174989c6eb4bad1afe70480c98263ef8e1cdb";
+    sha256 = "2d48a4de280fd7243ca76f9b12db5fe2486fc89dcdb510c77fa51f51733a04cc";
   };
 
   checkInputs = [ pytest pytest-repeat pytest-faulthandler pytest-timeout mock joblib ];
diff --git a/pkgs/development/python-modules/dominate/default.nix b/pkgs/development/python-modules/dominate/default.nix
index 86b3271990d..4e918968f44 100644
--- a/pkgs/development/python-modules/dominate/default.nix
+++ b/pkgs/development/python-modules/dominate/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "dominate";
-  version = "2.3.1";
+  version = "2.3.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0s9s9j9xmhkzw7apqx170fyvc0f800fd4a5jfn8xvj9k6vryd32b";
+    sha256 = "8dfcca2bde3937a2d03db6e55efcb0c0dea0d4ab0923dc983d794b19e9247328";
   };
 
   doCheck = !isPy3k;
diff --git a/pkgs/development/python-modules/emoji/default.nix b/pkgs/development/python-modules/emoji/default.nix
index 2c3b7cc0552..082958fcce1 100644
--- a/pkgs/development/python-modules/emoji/default.nix
+++ b/pkgs/development/python-modules/emoji/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "emoji";
-  version = "0.5.0";
+  version = "0.5.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "001b92b9c8a157e1ca49187745fa450513bc8b31c87328dfd83d674b9d7dfa63";
+    sha256 = "a9e9c08be9907c0042212c86dfbea0f61f78e9897d4df41a1d6307017763ad3e";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/eve/default.nix b/pkgs/development/python-modules/eve/default.nix
index b145f1b2e2b..4d85add4e3e 100644
--- a/pkgs/development/python-modules/eve/default.nix
+++ b/pkgs/development/python-modules/eve/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "Eve";
-  version = "0.8";
+  version = "0.8.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "9f926c715f88c7a92dc2b950ccc09cccd91f72fe0e93cde806b85d25b947df2f";
+    sha256 = "88105080e8a2567a1a8d50a5cded0d7d95e95f704b310c8107ef2ff7696f5316";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/filelock/default.nix b/pkgs/development/python-modules/filelock/default.nix
index cfa0e1be74f..80e3429b644 100644
--- a/pkgs/development/python-modules/filelock/default.nix
+++ b/pkgs/development/python-modules/filelock/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "filelock";
-  version = "3.0.6";
+  version = "3.0.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "59ccab92fe118da7e5ce5a9fcd95506ade58d9d5f606db4922192524edfac820";
+    sha256 = "97694f181bdf58f213cca0a7cb556dc7bf90e2f8eb9aa3151260adac56701afb";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/flask-autoindex/default.nix b/pkgs/development/python-modules/flask-autoindex/default.nix
index 0c353a34c38..afd3db60ffc 100644
--- a/pkgs/development/python-modules/flask-autoindex/default.nix
+++ b/pkgs/development/python-modules/flask-autoindex/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "Flask-AutoIndex";
-  version = "0.6.1";
+  version = "0.6.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0v87sa073hmj64f47sazbiw08kyxsxay100bd5084jwq7c1y92d7";
+    sha256 = "af2cdb34eefe6edbf43ce19200880829e8c2df3598000e75dc63c9b7e3478706";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix
index 4759e9d3c83..ed0b508a8ac 100644
--- a/pkgs/development/python-modules/fonttools/default.nix
+++ b/pkgs/development/python-modules/fonttools/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "fonttools";
-  version = "3.29.0";
+  version = "3.29.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "aab38c8c131670684321437d4857dcb4de1c775efd152a9ca9c4d81f1cb97fe7";
+    sha256 = "a687ca070daddb7ee25e3472b631acd0e53dbf11ecdf8e76248ee556472ede9d";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/genanki/default.nix b/pkgs/development/python-modules/genanki/default.nix
index bcc462e7237..45906c3c434 100644
--- a/pkgs/development/python-modules/genanki/default.nix
+++ b/pkgs/development/python-modules/genanki/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "genanki";
-  version = "0.6.0";
+  version = "0.6.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0xj8yd3acl8h457sh42balvcd0z4mg5idd4q63f7qlfzc5wgbb74";
+    sha256 = "2408f7d9955c8963fd9b1ecbb873f5d18dee786e060dcb083aef5dd86c736773";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/gpapi/default.nix b/pkgs/development/python-modules/gpapi/default.nix
index da3bbcf28db..13ba4f934e8 100644
--- a/pkgs/development/python-modules/gpapi/default.nix
+++ b/pkgs/development/python-modules/gpapi/default.nix
@@ -1,12 +1,12 @@
 { stdenv, buildPythonPackage, fetchPypi, requests, protobuf, pycryptodome }:
 
 buildPythonPackage rec {
-  version = "0.4.2";
+  version = "0.4.3";
   pname = "gpapi";
 
   src = fetchPypi {
     inherit version pname;
-    sha256 = "1fv2y3xbwn512fjxrdwgq6cz0xjd7mh54nq1f18wyz8w40vcznns";
+    sha256 = "9fd1351eb29c4da92d3a0ed2cd4e3c1634ea16afddbca133f6acc54766d61b02";
   };
 
   propagatedBuildInputs = [ requests protobuf pycryptodome ];
diff --git a/pkgs/development/python-modules/gpy/default.nix b/pkgs/development/python-modules/gpy/default.nix
index 72415879b41..0b9717b3fee 100644
--- a/pkgs/development/python-modules/gpy/default.nix
+++ b/pkgs/development/python-modules/gpy/default.nix
@@ -3,12 +3,12 @@
 
 buildPythonPackage rec {
   pname = "GPy";
-  version = "1.9.2";
+  version = "1.9.5";
   name  = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "372e43d41df5c90e0958d3073070994b351a7409c2e5fbd349cffe13bc24c10a";
+    sha256 = "97519bea69e7d7a703d9575c31d68a7c6f974ae125ee9d4a3e1fb510eadfb97e";
   };
 
   # running tests produces "ImportError: cannot import name 'linalg_cython'"
diff --git a/pkgs/development/python-modules/graphite-web/default.nix b/pkgs/development/python-modules/graphite-web/default.nix
index 791eb1b8cf0..51a7fd9b5d2 100644
--- a/pkgs/development/python-modules/graphite-web/default.nix
+++ b/pkgs/development/python-modules/graphite-web/default.nix
@@ -6,13 +6,13 @@ if django.version != "1.8.18"
 then throw "graphite-web should be build with django_1_8 and django_tagging_0_4_3"
 else buildPythonPackage rec {
   pname = "graphite-web";
-  version = "1.1.3";
+  version = "1.1.4";
 
   disabled = isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0nvyq1859abdch2l90avsjk9vb03s7wgxgrjsqvjhf2b9c1ncsfh";
+    sha256 = "4430929f954998d77aa0a61246c62d64a00a2f9464320f9a462294dd3448e522";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/greenlet/default.nix b/pkgs/development/python-modules/greenlet/default.nix
index 58b240297cf..3754f08c28b 100644
--- a/pkgs/development/python-modules/greenlet/default.nix
+++ b/pkgs/development/python-modules/greenlet/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "greenlet";
-  version = "0.4.14";
+  version = "0.4.15";
   disabled = isPyPy;  # builtin for pypy
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f1cc268a15ade58d9a0c04569fe6613e19b8b0345b64453064e2c3c6d79051af";
+    sha256 = "9416443e219356e3c31f1f918a91badf2e37acf297e2fa13d24d1cc2380f8fbc";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/grpcio-tools/default.nix b/pkgs/development/python-modules/grpcio-tools/default.nix
index c111e5f75a7..7c58c866f52 100644
--- a/pkgs/development/python-modules/grpcio-tools/default.nix
+++ b/pkgs/development/python-modules/grpcio-tools/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "grpcio-tools";
-  version = "1.14.1";
+  version = "1.14.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4ce5aa660d7884f23aac1eafa93b97a4c3e2b512edff871e91fdb6ee86ebd5ea";
+    sha256 = "b3fd64a5b8c1d981f6d68a331449109633710a346051c44e0f0cca1812e2b4b0";
   };
 
   enableParallelBuilding = true;
diff --git a/pkgs/development/python-modules/hdbscan/default.nix b/pkgs/development/python-modules/hdbscan/default.nix
index 3c86563adac..27d83d9c6c2 100644
--- a/pkgs/development/python-modules/hdbscan/default.nix
+++ b/pkgs/development/python-modules/hdbscan/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "hdbscan";
-  version = "0.8.15";
+  version = "0.8.18";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "446f98e1ea622a39c1f396d839fa2b1c35db98234e373336de61c3bd6ffaec78";
+    sha256 = "4d6782f08872f4c54983873a41759daae680d6247b0db363f3510cb001108f02";
   };
 
   checkInputs = [ nose ];
diff --git a/pkgs/development/python-modules/hupper/default.nix b/pkgs/development/python-modules/hupper/default.nix
index 5131e64a3c2..5f6a4a35ce1 100644
--- a/pkgs/development/python-modules/hupper/default.nix
+++ b/pkgs/development/python-modules/hupper/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "hupper";
-  version = "1.3";
+  version = "1.3.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "20387760e4d32bd4813c2cabc8e51d92b2c22c546102a0af182c33c152cd7ede";
+    sha256 = "899a1da85b71b62d903b5732703cad7454425b4ba9a6453930ad9168ec08ae0e";
   };
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/hvac/default.nix b/pkgs/development/python-modules/hvac/default.nix
index 310bd91b22b..7bc0d9d2107 100644
--- a/pkgs/development/python-modules/hvac/default.nix
+++ b/pkgs/development/python-modules/hvac/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "hvac";
-  version = "0.6.3";
+  version = "0.6.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "54672a93f75453a7de13c7c10c6d8a51630e2559a8e2a563d8e272e9e188443f";
+    sha256 = "d7f23883c44458078359142608d0bc6373c4bcec107bdb609c827ee1dda61431";
   };
 
   propagatedBuildInputs = [ requests ];
diff --git a/pkgs/development/python-modules/identify/default.nix b/pkgs/development/python-modules/identify/default.nix
index b4b5d9c8727..1d6b1ed0b19 100644
--- a/pkgs/development/python-modules/identify/default.nix
+++ b/pkgs/development/python-modules/identify/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "identify";
-  version = "1.1.4";
+  version = "1.1.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0hvwfpf6fmgn93abrvj88pi7sbcib32s4c5r99lw67kbziq5x129";
+    sha256 = "5e956558a9a1e3b3891d7c6609fc9709657a11878af288ace484d1a46a93922b";
   };
 
   # Tests not included in PyPI tarball
diff --git a/pkgs/development/python-modules/inflect/default.nix b/pkgs/development/python-modules/inflect/default.nix
index 94b0fc801fa..8c58a4f9de7 100644
--- a/pkgs/development/python-modules/inflect/default.nix
+++ b/pkgs/development/python-modules/inflect/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "inflect";
-  version = "1.0.0";
+  version = "1.0.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0ll34l5b2wsbcw9i2hvkhmq6szxrp7fzc2hjmpz1cvny81bhg3kx";
+    sha256 = "ec42f5d5d2baa54ba6e3fa23698554c09362dd478cc66b3c28c5d0b76d7d0581";
   };
 
   buildInputs = [ setuptools_scm ];
diff --git a/pkgs/development/python-modules/ipywidgets/default.nix b/pkgs/development/python-modules/ipywidgets/default.nix
index dde041140b9..b91b5d7a775 100644
--- a/pkgs/development/python-modules/ipywidgets/default.nix
+++ b/pkgs/development/python-modules/ipywidgets/default.nix
@@ -14,11 +14,11 @@
 
 buildPythonPackage rec {
   pname = "ipywidgets";
-  version = "7.4.0";
+  version = "7.4.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "fd24a66d82f2ea49e281da7714a7c656340d3ec24dff376b17590fa59469b817";
+    sha256 = "a3e224f430163f767047ab9a042fc55adbcab0c24bbe6cf9f306c4f89fdf0ba3";
   };
 
   # Tests are not distributed
diff --git a/pkgs/development/python-modules/jdatetime/default.nix b/pkgs/development/python-modules/jdatetime/default.nix
index a7c362231ca..03aa9d0d0f8 100644
--- a/pkgs/development/python-modules/jdatetime/default.nix
+++ b/pkgs/development/python-modules/jdatetime/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "jdatetime";
-  version = "3.0.0";
+  version = "3.0.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "07cdb02e8d6610c38e8ae7746b12cbc39068cc5d54fb2baa915579b60d781b5b";
+    sha256 = "21824ab1e29e9ccbca85e77562a090067882976880603c41af8d9c4cffc1d4fc";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/jupyterlab/default.nix b/pkgs/development/python-modules/jupyterlab/default.nix
index 23aaff8a728..f0bd058271a 100644
--- a/pkgs/development/python-modules/jupyterlab/default.nix
+++ b/pkgs/development/python-modules/jupyterlab/default.nix
@@ -1,12 +1,12 @@
 { lib, buildPythonPackage, isPy3k, fetchPypi, ipython_genutils, jupyterlab_launcher, notebook }:
 buildPythonPackage rec {
   pname = "jupyterlab";
-  version = "0.34.6";
+  version = "0.34.12";
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d6e5a3855a0d55e6aa4ab704379da5da3db2e652442e79acfa2e9d14ef50ccb3";
+    sha256 = "7d8378d19a0ae173e91a493db996c37828b410b7ee556da21a153486168ecf87";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/keras-applications/default.nix b/pkgs/development/python-modules/keras-applications/default.nix
index f9617f03d8e..a069c205144 100644
--- a/pkgs/development/python-modules/keras-applications/default.nix
+++ b/pkgs/development/python-modules/keras-applications/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "Keras_Applications";
-  version = "1.0.5";
+  version = "1.0.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "26a7318b9d8d5be80d75ab08a1284aaf4b94125dd8271b18ca89791e16eb2cfc";
+    sha256 = "a03af60ddc9c5afdae4d5c9a8dd4ca857550e0b793733a5072e0725829b87017";
   };
 
   # Cyclic dependency: keras-applications requires keras, which requires keras-applications
diff --git a/pkgs/development/python-modules/keras-preprocessing/default.nix b/pkgs/development/python-modules/keras-preprocessing/default.nix
index 45ce1d7f61d..a57b6f7dfa3 100644
--- a/pkgs/development/python-modules/keras-preprocessing/default.nix
+++ b/pkgs/development/python-modules/keras-preprocessing/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "Keras_Preprocessing";
-  version = "1.0.3";
+  version = "1.0.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "02ba0a3b31ed89c4b0c21d55ba7d87529097d56f394e3850b6d3c9e6c63ce7ae";
+    sha256 = "ef2e482c4336fcf7180244d06f4374939099daa3183816e82aee7755af35b754";
   };
 
   # Cyclic dependency: keras-preprocessing requires keras, which requires keras-preprocessing
diff --git a/pkgs/development/python-modules/keras/default.nix b/pkgs/development/python-modules/keras/default.nix
index 43f3bd935d2..83ef2328279 100644
--- a/pkgs/development/python-modules/keras/default.nix
+++ b/pkgs/development/python-modules/keras/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "Keras";
-  version = "2.2.2";
+  version = "2.2.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "468d98da104ec5c3dbb10c2ef6bb345ab154f6ca2d722d4c250ef4d6105de17a";
+    sha256 = "90b610a3dbbf6d257b20a079eba3fdf2eed2158f64066a7c6f7227023fd60bc9";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/ledgerblue/default.nix b/pkgs/development/python-modules/ledgerblue/default.nix
index d324afcc647..52d7cba3f95 100644
--- a/pkgs/development/python-modules/ledgerblue/default.nix
+++ b/pkgs/development/python-modules/ledgerblue/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "ledgerblue";
-  version = "0.1.19";
+  version = "0.1.20";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3969b3c375c0f3fb60ff1645621ebf2f39fb697a53851620705f27ed7b283097";
+    sha256 = "fb7ac6389ad13d3c9baa149b527e2cb5798e749e2b6729e5fe8437092ece6164";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/llfuse/default.nix b/pkgs/development/python-modules/llfuse/default.nix
index 7eac54d84d8..78daa85ea80 100644
--- a/pkgs/development/python-modules/llfuse/default.nix
+++ b/pkgs/development/python-modules/llfuse/default.nix
@@ -4,12 +4,12 @@
 
 buildPythonPackage rec {
   pname = "llfuse";
-  version = "1.3.4";
+  version = "1.3.5";
   name = pname + "-" + version;
 
   src = fetchurl {
     url = "mirror://pypi/l/llfuse/${name}.tar.bz2";
-    sha256 = "50396c5f3c49c3145e696e5b62df4fcca8b66634788020fba7b6932a858c78c2";
+    sha256 = "6e412a3d9be69162d49b8a4d6fb3c343d1c1fba847f4535d229e0ece2548ead8";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/development/python-modules/lxml/default.nix b/pkgs/development/python-modules/lxml/default.nix
index 3778098922a..5672fce602e 100644
--- a/pkgs/development/python-modules/lxml/default.nix
+++ b/pkgs/development/python-modules/lxml/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "lxml";
-  version = "4.2.4";
+  version = "4.2.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "e2afbe403090f5893e254958d02875e0732975e73c4c0cdd33c1f009a61963ca";
+    sha256 = "36720698c29e7a9626a0dc802ef8885f8f0239bfd1689628ecd459a061f2807f";
   };
 
   buildInputs = [ libxml2 libxslt ];
diff --git a/pkgs/development/python-modules/markdown2/default.nix b/pkgs/development/python-modules/markdown2/default.nix
index f49b2630b6c..a07e0b14fdc 100644
--- a/pkgs/development/python-modules/markdown2/default.nix
+++ b/pkgs/development/python-modules/markdown2/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "markdown2";
-  version = "2.3.5";
+  version = "2.3.6";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "8bb9a24eb2aa02f1427aabe46483f0f0215ab18c8a345315ae8e2ee3c3a09c03";
+    sha256 = "08a124043aa0ad36ba2136239547d5011a2b770278abb11a5609611e0040ea05";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/marshmallow/default.nix b/pkgs/development/python-modules/marshmallow/default.nix
index 20543faeb16..cd4e86d4687 100644
--- a/pkgs/development/python-modules/marshmallow/default.nix
+++ b/pkgs/development/python-modules/marshmallow/default.nix
@@ -4,7 +4,7 @@
 
 buildPythonPackage rec {
   pname = "marshmallow";
-  version = "2.15.4";
+  version = "2.15.6";
 
   meta = {
     homepage = "https://github.com/marshmallow-code/marshmallow";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0f3776aa5b5405f6000c9304841abe6d4d708bb08207fc89a5ecd86622ec9e54";
+    sha256 = "485ac6ed0dff5e1af6ea1e3a54425a448968f581b065424c89a5375e4d4866fd";
   };
 
   propagatedBuildInputs = [ dateutil simplejson ];
diff --git a/pkgs/development/python-modules/micawber/default.nix b/pkgs/development/python-modules/micawber/default.nix
index 5e3afe05ea7..3425440390d 100644
--- a/pkgs/development/python-modules/micawber/default.nix
+++ b/pkgs/development/python-modules/micawber/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "micawber";
-  version = "0.3.5";
+  version = "0.3.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0pnq6j8f144virhri0drgf0058x6qcxfd5yrb0ynbwr8djh326yn";
+    sha256 = "2e128db870cf3a351f5c680b6d1ae7e097a7ff6c70c8ba78c7d3be8e3d3c20bd";
   };
 
   propagatedBuildInputs = [ beautifulsoup4 ];
diff --git a/pkgs/development/python-modules/moto/default.nix b/pkgs/development/python-modules/moto/default.nix
index f9d1fee8973..4a32c5e3e37 100644
--- a/pkgs/development/python-modules/moto/default.nix
+++ b/pkgs/development/python-modules/moto/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "moto";
-  version = "1.3.5";
+  version = "1.3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52426f2567e51ba73fdc7c7d617236b7e7918dca2421caabe13e5290942b53d8";
+    sha256 = "58fe0a0d55cbd9a001c02c146c15790cfcebf010c6648cb9990e6c3204709cbb";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/msgpack-numpy/default.nix b/pkgs/development/python-modules/msgpack-numpy/default.nix
index e04e9d1e802..06063fd8b99 100644
--- a/pkgs/development/python-modules/msgpack-numpy/default.nix
+++ b/pkgs/development/python-modules/msgpack-numpy/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "msgpack-numpy";
-  version = "0.4.3.1";
+  version = "0.4.4.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "31fd5dd009bbee7f8b107db8c859e3a0a2793acc196f25ffbbae1e71b4c63ca5";
+    sha256 = "ac15d3a7b9e29d3e10a2683dc00ea495891b9b4cbb502ab0b0d2e516bd0b2eab";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/ncclient/default.nix b/pkgs/development/python-modules/ncclient/default.nix
index 9933e849d0b..24016ef8b10 100644
--- a/pkgs/development/python-modules/ncclient/default.nix
+++ b/pkgs/development/python-modules/ncclient/default.nix
@@ -12,11 +12,11 @@
 
 buildPythonPackage rec {
   pname = "ncclient";
-  version = "0.6.2";
+  version = "0.6.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6616828f9c5d318906dae22378a78342bbfa5983f1775c1af8bfecc779434c38";
+    sha256 = "3ab58ee0d71069cb5b0e2f29a4e605d1d8417bd10af45b73ee3e817fe389fadc";
   };
 
   checkInputs = [ nose rednose ];
diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix
index a092123da82..3d8258aeb7b 100644
--- a/pkgs/development/python-modules/nipype/default.nix
+++ b/pkgs/development/python-modules/nipype/default.nix
@@ -36,11 +36,11 @@ assert !isPy3k -> configparser != null;
 
 buildPythonPackage rec {
   pname = "nipype";
-  version = "1.1.2";
+  version = "1.1.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f2fe29bf863cb643bd5c8d2bdeaaf488308c293c9fb9913bc7a9504dc3bf8db6";
+    sha256 = "c14856f3d4823aa5d63d0c19e8f04d70c74e156361ce607d86694046bab06806";
   };
 
   # see https://github.com/nipy/nipype/issues/2240
diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix
index c66650c0abf..87428f4563d 100644
--- a/pkgs/development/python-modules/numpy/default.nix
+++ b/pkgs/development/python-modules/numpy/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "numpy";
-  version = "1.15.1";
+  version = "1.15.2";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "7b9e37f194f8bcdca8e9e6af92e2cbad79e360542effc2dd6b98d63955d8d8a3";
+    sha256 = "27a0d018f608a3fe34ac5e2b876f4c23c47e38295c47dd0775cc294cd2614bc1";
   };
 
   disabled = isPyPy;
diff --git a/pkgs/development/python-modules/oauth2client/default.nix b/pkgs/development/python-modules/oauth2client/default.nix
index 81742a99da8..8500b53b244 100644
--- a/pkgs/development/python-modules/oauth2client/default.nix
+++ b/pkgs/development/python-modules/oauth2client/default.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage rec {
   pname = "oauth2client";
-  version = "4.1.2";
+  version = "4.1.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bd3062c06f8b10c6ef7a890b22c2740e5f87d61b6e1f4b1c90d069cdfc9dadb5";
+    sha256 = "d486741e451287f69568a4d26d70d9acd73a2bbfa275746c535b4209891cccc6";
   };
 
   propagatedBuildInputs = [ six httplib2 pyasn1-modules rsa ];
diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix
index 6445201c40b..034fa8e6791 100644
--- a/pkgs/development/python-modules/openpyxl/default.nix
+++ b/pkgs/development/python-modules/openpyxl/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "openpyxl";
-  version = "2.5.6";
+  version = "2.5.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "04091e034911a0afc531c3a15e5ae0b1b6a43654dbf63c187f47d20cdfefac1c";
+    sha256 = "22904d7bdfaaab33d65d50a0915a65eeb2f29c85d9ec53081563850678a29927";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/ordered-set/default.nix b/pkgs/development/python-modules/ordered-set/default.nix
index 4044ad3f2fd..233a4d44c43 100644
--- a/pkgs/development/python-modules/ordered-set/default.nix
+++ b/pkgs/development/python-modules/ordered-set/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "ordered-set";
-  version = "3.0.1";
+  version = "3.0.2";
 
   buildInputs = [ pytest pytestrunner ];
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0yyfkkfzpwlx4jlfqzb7p1xpzmn2jyzq2qlakqx62pxizfzxfvrx";
+    sha256 = "7d292b866fa44f339ac6e624e3d338accfb415ce0a8431595d51990fbdf61d3b";
   };
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/paramz/default.nix b/pkgs/development/python-modules/paramz/default.nix
index 718393b5e1e..f537b8d8e31 100644
--- a/pkgs/development/python-modules/paramz/default.nix
+++ b/pkgs/development/python-modules/paramz/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "paramz";
-  version = "0.9.2";
+  version = "0.9.4";
   name  = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7b38c2487602c423ac402214c3b3fa6bbe22b294e2f9e5f9f3842182e1541599";
+    sha256 = "179ca77a965e6e724217257793e3c8c022285ea2190a85e0826ac98dea316219";
   };
 
   propagatedBuildInputs = [ numpy scipy six decorator ];
diff --git a/pkgs/development/python-modules/pathspec/default.nix b/pkgs/development/python-modules/pathspec/default.nix
index 15ff1b32241..39a2789a360 100644
--- a/pkgs/development/python-modules/pathspec/default.nix
+++ b/pkgs/development/python-modules/pathspec/default.nix
@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname   = "pathspec";
-  version = "0.5.7";
+  version = "0.5.9";
   name    = "${pname}-${version}";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "69ac7869c9ce308cfe631e29c09f9da60fae02baf31418885bbbb0c75adcd8c5";
+    sha256 = "54a5eab895d89f342b52ba2bffe70930ef9f8d96e398cccf530d21fa0516a873";
   };
 
   meta = {
diff --git a/pkgs/development/python-modules/phonenumbers/default.nix b/pkgs/development/python-modules/phonenumbers/default.nix
index a6ca8fae7cb..01c387928f5 100644
--- a/pkgs/development/python-modules/phonenumbers/default.nix
+++ b/pkgs/development/python-modules/phonenumbers/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "phonenumbers";
-  version = "8.9.12";
+  version = "8.9.15";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "39cd0c67a17a9ca4c2851ab8fad5272948d811ccd2a8e52ddcc8d275a802af70";
+    sha256 = "8e9664ce0a838c81f4fb3e4d271c76859d26bde57242d64fe1632ab636f5319f";
   };
 
   meta = {
diff --git a/pkgs/development/python-modules/pip/default.nix b/pkgs/development/python-modules/pip/default.nix
index f5732d2cb95..7fc5adee7fb 100644
--- a/pkgs/development/python-modules/pip/default.nix
+++ b/pkgs/development/python-modules/pip/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "pip";
-  version = "18.0";
+  version = "18.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a0e11645ee37c90b40c46d607070c4fd583e2cd46231b1c06e389c5e814eed76";
+    sha256 = "c0a292bd977ef590379a3f05d7b7f65135487b67470f6281289a94e015650ea1";
   };
 
   # pip detects that we already have bootstrapped_pip "installed", so we need
diff --git a/pkgs/development/python-modules/pyaxmlparser/default.nix b/pkgs/development/python-modules/pyaxmlparser/default.nix
index 7f9cbf9518e..9f4f6627e2c 100644
--- a/pkgs/development/python-modules/pyaxmlparser/default.nix
+++ b/pkgs/development/python-modules/pyaxmlparser/default.nix
@@ -1,12 +1,12 @@
 { buildPythonPackage, stdenv, lxml, click, fetchPypi }:
 
 buildPythonPackage rec {
-  version = "0.3.10";
+  version = "0.3.11";
   pname = "pyaxmlparser";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "5c1f569f4dc2232d7f146eb190bc513373ff6555f97ae904740f966f0fb2dd77";
+    sha256 = "dbe5ca9ddcf2f5041f6e5e3acc81d2940c696db89de4f840535a256e78f5e489";
   };
 
   propagatedBuildInputs = [ lxml click ];
diff --git a/pkgs/development/python-modules/pycuda/default.nix b/pkgs/development/python-modules/pycuda/default.nix
index 2d1da5339af..5f58101a8b5 100644
--- a/pkgs/development/python-modules/pycuda/default.nix
+++ b/pkgs/development/python-modules/pycuda/default.nix
@@ -22,11 +22,11 @@ let
 in
 buildPythonPackage rec {
   pname = "pycuda";
-  version = "2018.1";
+  version = "2018.1.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7079f7738e83ee79ae26f0827ada29fe55921fec9760201199cc2bfb69446c92";
+    sha256 = "49d575fca3fd3c95467c3b0fb51967ad17d0c4cc18e078a6748309af4de36a8d";
   };
 
   preConfigure = ''
diff --git a/pkgs/development/python-modules/pyhomematic/default.nix b/pkgs/development/python-modules/pyhomematic/default.nix
index cd10edd2b64..95dc4798357 100644
--- a/pkgs/development/python-modules/pyhomematic/default.nix
+++ b/pkgs/development/python-modules/pyhomematic/default.nix
@@ -2,13 +2,13 @@
 
 buildPythonPackage rec {
   pname = "pyhomematic";
-  version = "0.1.47";
+  version = "0.1.50";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bdac91dc6810b3d9f53d26daf6e6f26480c556fc3b43890e376aa23c17afd60b";
+    sha256 = "d1b13b2786784b197e279e82fb0fbdb11cb55df91b48c12160d85de435fd4046";
   };
 
   # PyPI tarball does not include tests/ directory
diff --git a/pkgs/development/python-modules/pymatgen/default.nix b/pkgs/development/python-modules/pymatgen/default.nix
index 523e7f80806..1365cc4aeb6 100644
--- a/pkgs/development/python-modules/pymatgen/default.nix
+++ b/pkgs/development/python-modules/pymatgen/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pymatgen";
-  version = "2018.9.1";
+  version = "2018.9.30";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dee5dbd8008081de9f27759c20c550d09a07136eeebfe941e3d05fd88ccace18";
+    sha256 = "08c8da84beec153c0ad7acc47e67245e2d6598169e9803b82bd53131a67293be";
   };
 
   nativeBuildInputs = [ glibcLocales ];
diff --git a/pkgs/development/python-modules/pyparsing/default.nix b/pkgs/development/python-modules/pyparsing/default.nix
index 51500281abb..5861288926f 100644
--- a/pkgs/development/python-modules/pyparsing/default.nix
+++ b/pkgs/development/python-modules/pyparsing/default.nix
@@ -1,11 +1,11 @@
 { stdenv, buildPythonPackage, fetchPypi }:
 buildPythonPackage rec {
     pname = "pyparsing";
-    version = "2.2.0";
+    version = "2.2.2";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "016b9gh606aa44sq92jslm89bg874ia0yyiyb643fa6dgbsbqch8";
+      sha256 = "bc6c7146b91af3f567cf6daeaec360bc07d45ffec4cf5353f4d7a208ce7ca30a";
     };
 
     # Not everything necessary to run the tests is included in the distribution
diff --git a/pkgs/development/python-modules/pyperclip/default.nix b/pkgs/development/python-modules/pyperclip/default.nix
index 0b073799254..76260331521 100644
--- a/pkgs/development/python-modules/pyperclip/default.nix
+++ b/pkgs/development/python-modules/pyperclip/default.nix
@@ -1,12 +1,12 @@
 { lib, buildPythonPackage, fetchPypi }:
 
 buildPythonPackage rec {
-  version = "1.6.4";
+  version = "1.6.5";
   pname = "pyperclip";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "f70e83d27c445795b6bf98c2bc826bbf2d0d63d4c7f83091c8064439042ba0dc";
+    sha256 = "406bc020d4b8e60d8673876271b815befc4c02fd8d919e4aacc667d69fab99ea";
   };
 
   doCheck = false;
diff --git a/pkgs/development/python-modules/pyroute2/default.nix b/pkgs/development/python-modules/pyroute2/default.nix
index e9c48cbb8b4..16805ac58c0 100644
--- a/pkgs/development/python-modules/pyroute2/default.nix
+++ b/pkgs/development/python-modules/pyroute2/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pyroute2";
-  version = "0.5.2";
+  version = "0.5.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "42bf74495d95a0196a74dd171357f660175aba2bfc23f9b5f63e3830ccbef9ac";
+    sha256 = "79f7b4286be773c46914df0201dabaf92717a9c06e341e0c420603b2dd31c6bf";
   };
 
   # requires root priviledges
diff --git a/pkgs/development/python-modules/pyspark/default.nix b/pkgs/development/python-modules/pyspark/default.nix
index b333ca27143..29dd344a34c 100644
--- a/pkgs/development/python-modules/pyspark/default.nix
+++ b/pkgs/development/python-modules/pyspark/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pyspark";
-  version = "2.3.1";
+  version = "2.3.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "52d77a7ef43088b0235742cfcafc83435d0d98c5fdded1d8c600f1887e9e0213";
+    sha256 = "7fb3b4fe47edb0fb78cecec37e0f2a728590f17ef6a49eae55141a7a374c07c8";
   };
 
   # pypandoc is broken with pandoc2, so we just lose docs.
diff --git a/pkgs/development/python-modules/pysrim/default.nix b/pkgs/development/python-modules/pysrim/default.nix
index 90dfc1f5604..dc6c09f7b70 100644
--- a/pkgs/development/python-modules/pysrim/default.nix
+++ b/pkgs/development/python-modules/pysrim/default.nix
@@ -8,11 +8,11 @@
 
 buildPythonPackage rec {
   pname = "pysrim";
-  version = "0.5.8";
+  version = "0.5.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6c297b4ea6f037946c72e94ddd9a7624cf2fd97c488acbee9409001c970754f1";
+    sha256 = "071c5be48e58fa019f7848588f88ce0a09bfe6493c9ff5987829d162c0f4a497";
   };
 
   buildInputs = [ pytestrunner ];
diff --git a/pkgs/development/python-modules/pytest-isort/default.nix b/pkgs/development/python-modules/pytest-isort/default.nix
index 758a2f194b2..23cd7667992 100644
--- a/pkgs/development/python-modules/pytest-isort/default.nix
+++ b/pkgs/development/python-modules/pytest-isort/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-isort";
-  version = "0.2.0";
+  version = "0.2.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d4d195ecfe33d81e258d251b2679b32216bad84131fb41984da22d9d0328a6fe";
+    sha256 = "c70d0f900f4647bb714f0843dd82d7f7b759904006de31254efdb72ce88e0c0e";
   };
 
   propagatedBuildInputs = [ pytestcache pytest isort ];
diff --git a/pkgs/development/python-modules/pytest-xdist/default.nix b/pkgs/development/python-modules/pytest-xdist/default.nix
index 46d505b3801..71d4df4a0c5 100644
--- a/pkgs/development/python-modules/pytest-xdist/default.nix
+++ b/pkgs/development/python-modules/pytest-xdist/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "pytest-xdist";
-  version = "1.23.0";
+  version = "1.23.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "28e25e79698b2662b648319d3971c0f9ae0e6500f88258ccb9b153c31110ba9b";
+    sha256 = "1ef0d05c905cfa0c5442c90e9e350e65c6ada120e33a00a066ca51c89f5f869a";
   };
 
   nativeBuildInputs = [ setuptools_scm ];
diff --git a/pkgs/development/python-modules/python-slugify/default.nix b/pkgs/development/python-modules/python-slugify/default.nix
index 9c8cc68af3d..b3e3de0285a 100644
--- a/pkgs/development/python-modules/python-slugify/default.nix
+++ b/pkgs/development/python-modules/python-slugify/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
     pname = "python-slugify";
-    version = "1.2.5";
+    version = "1.2.6";
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "5dbb360b882b2dabe0471a1a92f604504d83c2a73c71f2098d004ab62e695534";
+      sha256 = "7723daf30996db26573176bddcdf5fcb98f66dc70df05c9cb29f2c79b8193245";
     };
     doCheck = !isPy3k;
     # (only) on python3 unittest loader (loadTestsFromModule) fails
diff --git a/pkgs/development/python-modules/python_openzwave/default.nix b/pkgs/development/python-modules/python_openzwave/default.nix
index e04915a503d..a7973501bf7 100644
--- a/pkgs/development/python-modules/python_openzwave/default.nix
+++ b/pkgs/development/python-modules/python_openzwave/default.nix
@@ -5,13 +5,13 @@
 
 buildPythonPackage rec {
   pname = "python_openzwave";
-  version = "0.4.9";
+  version = "0.4.10";
 
   disabled = !isPy3k;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "97ddd104f52e3a4d7115c3de5d2136631d1f66627fc9b45d56956c3f2b6e0cdb";
+    sha256 = "4bde7afd6c97637b59ee37a1c432c285daf179e535eb9a0d5dd95a65600b0cc8";
     extension = "zip";
   };
 
diff --git a/pkgs/development/python-modules/reikna/default.nix b/pkgs/development/python-modules/reikna/default.nix
index 760ca0056ff..2e828a2a8e8 100644
--- a/pkgs/development/python-modules/reikna/default.nix
+++ b/pkgs/development/python-modules/reikna/default.nix
@@ -13,11 +13,11 @@
 
 buildPythonPackage rec {
   pname = "reikna";
-  version = "0.7.1";
+  version = "0.7.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0afc5d502cc9ba0dadd88c15d72e2fdaa09fee31faaae5064889732de7940953";
+    sha256 = "c52f5ae13e35284feda8f6b67c0d6223c02c0292b1495969cf7a42f547b3fc18";
   };
 
   checkInputs = [ sphinx pytestcov pytest ];
diff --git a/pkgs/development/python-modules/relatorio/default.nix b/pkgs/development/python-modules/relatorio/default.nix
index dbc28263b06..e9f4b8e2bd6 100644
--- a/pkgs/development/python-modules/relatorio/default.nix
+++ b/pkgs/development/python-modules/relatorio/default.nix
@@ -2,10 +2,10 @@
 
 buildPythonPackage rec {
   pname = "relatorio";
-  version = "0.8.0";
+  version = "0.8.1";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bddf85d029c5c85a0f976d73907e14e4c3093065fe8527170c91abf0218546d9";
+    sha256 = "149a1c4c2a35d9b9e634fe80cac405bc9b4c03a42f818302362183515e7e835d";
   };
   propagatedBuildInputs = [
     genshi
diff --git a/pkgs/development/python-modules/reportlab/default.nix b/pkgs/development/python-modules/reportlab/default.nix
index e2f2a7814aa..82d2889364f 100644
--- a/pkgs/development/python-modules/reportlab/default.nix
+++ b/pkgs/development/python-modules/reportlab/default.nix
@@ -11,11 +11,11 @@ let
   ft = freetype.overrideAttrs (oldArgs: { dontDisableStatic = true; });
 in buildPythonPackage rec {
   pname = "reportlab";
-  version = "3.5.6";
+  version = "3.5.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "3836a49e7ea7bce458f437cbc094633c7fd4ac027180565875c18ecc726f261e";
+    sha256 = "f92f81314807cd860f29fe07a1a4100b03910ae6bbfca20a07e02c3b460f4f20";
   };
 
   checkInputs = [ glibcLocales ];
diff --git a/pkgs/development/python-modules/rlp/default.nix b/pkgs/development/python-modules/rlp/default.nix
index 150234a3dd2..d9b55c85219 100644
--- a/pkgs/development/python-modules/rlp/default.nix
+++ b/pkgs/development/python-modules/rlp/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "rlp";
-  version = "1.0.2";
+  version = "1.0.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "040fb5172fa23d27953a886c40cac989fc031d0629db934b5a9edcd2fb28df1e";
+    sha256 = "b0ad3f3173dedf416565299f684717d4ae7620207d562d3ef94b818a40a48781";
   };
 
   checkInputs = [ pytest hypothesis ];
diff --git a/pkgs/development/python-modules/scikit-image/default.nix b/pkgs/development/python-modules/scikit-image/default.nix
index 1a07e001cae..5d8399d6267 100644
--- a/pkgs/development/python-modules/scikit-image/default.nix
+++ b/pkgs/development/python-modules/scikit-image/default.nix
@@ -16,11 +16,11 @@
 
 buildPythonPackage rec {
   pname = "scikit-image";
-  version = "0.14.0";
+  version = "0.14.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "325f75eb80fbc5371136e37f323445309ca9f65b6c6f718d0d0e2189e5de1224";
+    sha256 = "86a9b3b4f74f231e0a6bcfd3235dcf3f0118df25dac21201da5e064d681e2c50";
   };
 
   buildInputs = [ cython ];
diff --git a/pkgs/development/python-modules/seekpath/default.nix b/pkgs/development/python-modules/seekpath/default.nix
index dfca0a5fa2e..5aa34a44205 100644
--- a/pkgs/development/python-modules/seekpath/default.nix
+++ b/pkgs/development/python-modules/seekpath/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "seekpath";
-  version = "1.8.2";
+  version = "1.8.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "8fb22231ed6fc6aa12e2f2cc6c8ca67b82648e16c1c85ddac2e2237ac4553d83";
+    sha256 = "b61dadba82acc0838402981b7944155adc092b114ca81f53f61b1d498a512e3a";
   };  
 
   LC_ALL = "en_US.utf-8";
diff --git a/pkgs/development/python-modules/shippai/default.nix b/pkgs/development/python-modules/shippai/default.nix
index ac035061692..ffb221ffdc5 100644
--- a/pkgs/development/python-modules/shippai/default.nix
+++ b/pkgs/development/python-modules/shippai/default.nix
@@ -3,11 +3,11 @@
 buildPythonPackage rec {
   pname = "shippai";
   # Please make sure that vdirsyncer still builds if you update this package.
-  version = "0.2.3";
+  version = "0.2.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1ppwywzg4d12h658682ssmingm6ls6a96p4ak26i2w9d4lf8pfsc";
+    sha256 = "87cc9899212d917031853becd7cb14808181289c3c329b1418e9b4b6aae93c80";
   };
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/python-modules/sortedcontainers/default.nix b/pkgs/development/python-modules/sortedcontainers/default.nix
index 1252c676646..5362e0b0037 100644
--- a/pkgs/development/python-modules/sortedcontainers/default.nix
+++ b/pkgs/development/python-modules/sortedcontainers/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "sortedcontainers";
-  version = "2.0.4";
+  version = "2.0.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "607294c6e291a270948420f7ffa1fb3ed47384a4c08db6d1e9c92d08a6981982";
+    sha256 = "b74f2756fb5e23512572cc76f0fe0832fd86310f77dfee54335a35fb33f6b950";
   };
 
   # pypi tarball does not come with tests
diff --git a/pkgs/development/python-modules/sounddevice/default.nix b/pkgs/development/python-modules/sounddevice/default.nix
index 5b8c4a46b2b..bdb003467f5 100644
--- a/pkgs/development/python-modules/sounddevice/default.nix
+++ b/pkgs/development/python-modules/sounddevice/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "sounddevice";
-  version = "0.3.11";
+  version = "0.3.12";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0pfcbgbl77nggchxb2i5rb78m7hpgn65aqpz99yfx1fgfbmy9yg1";
+    sha256 = "f59ae4e2ec12cb1e5940f06f08804ecca855d959de25ca45a3938de45d0f81a2";
   };
 
   propagatedBuildInputs = [ cffi numpy portaudio ];
diff --git a/pkgs/development/python-modules/sphfile/default.nix b/pkgs/development/python-modules/sphfile/default.nix
index 8ee4ce76069..3309f1e9978 100644
--- a/pkgs/development/python-modules/sphfile/default.nix
+++ b/pkgs/development/python-modules/sphfile/default.nix
@@ -2,12 +2,12 @@
 
 buildPythonPackage rec {
   pname = "sphfile";
-  version = "1.0.0";
+  version = "1.0.1";
   name = pname + "-" + version;
 
   src = fetchurl {
     url = "mirror://pypi/s/sphfile/${name}.tar.gz";
-    sha256 = "1ly9746xrzbiax9cxr5sxlg0wvf6fdxcrgwsqqxckk3wnqfypfrd";
+    sha256 = "422b0704107b02ef3ca10e55ccdc80b0bb5ad8e2613b6442f8e2ea372c7cf5d8";
   };
 
   propagatedBuildInputs = [ numpy ];
diff --git a/pkgs/development/python-modules/sphinx/default.nix b/pkgs/development/python-modules/sphinx/default.nix
index 9e71766065c..e4e9bfaba1c 100644
--- a/pkgs/development/python-modules/sphinx/default.nix
+++ b/pkgs/development/python-modules/sphinx/default.nix
@@ -26,10 +26,10 @@
 
 buildPythonPackage rec {
   pname = "Sphinx";
-  version = "1.7.8";
+  version = "1.7.9";
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a07050845cc9a2f4026a6035cc8ed795a5ce7be6528bbc82032385c10807dfe7";
+    sha256 = "217a7705adcb573da5bbe1e0f5cab4fa0bd89fd9342c9159121746f593c2d5a4";
   };
   LC_ALL = "en_US.UTF-8";
 
diff --git a/pkgs/development/python-modules/sqlalchemy/default.nix b/pkgs/development/python-modules/sqlalchemy/default.nix
index 2f755869d79..e1c576f9427 100644
--- a/pkgs/development/python-modules/sqlalchemy/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "SQLAlchemy";
-  version = "1.2.11";
+  version = "1.2.12";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ef6569ad403520ee13e180e1bfd6ed71a0254192a934ec1dbd3dbf48f4aa9524";
+    sha256 = "c5951d9ef1d5404ed04bae5a16b60a0779087378928f997a294d1229c6ca4d3e";
   };
 
   checkInputs = [
diff --git a/pkgs/development/python-modules/sqlmap/default.nix b/pkgs/development/python-modules/sqlmap/default.nix
index 5713d7591dc..2aeaa068a43 100644
--- a/pkgs/development/python-modules/sqlmap/default.nix
+++ b/pkgs/development/python-modules/sqlmap/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "sqlmap";
-  version = "1.2.8";
+  version = "1.2.10";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d261d93e7abed20543c261327d30b9f9936f0bed3c1a595f39218eeb66094526";
+    sha256 = "e64efce7f3b50cab02c8da968e00c1b456f59aff193d3dae2446d7c117723d53";
   };
 
   # No tests in archive
diff --git a/pkgs/development/python-modules/toml/default.nix b/pkgs/development/python-modules/toml/default.nix
index a80657dc4b4..9e408f2cb16 100644
--- a/pkgs/development/python-modules/toml/default.nix
+++ b/pkgs/development/python-modules/toml/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "toml";
-  version = "0.9.4";
+  version = "0.9.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0bdbpbip67wdm6c7xwc6mmbmskyradj4cdxn1iibj4fcx1nbv1lf";
+    sha256 = "380178cde50a6a79f9d2cf6f42a62a5174febe5eea4126fe4038785f1d888d42";
   };
 
   # This package has a test script (built for Travis) that involves a)
diff --git a/pkgs/development/python-modules/whisper/default.nix b/pkgs/development/python-modules/whisper/default.nix
index 4d48b63da54..1fb9dd6da16 100644
--- a/pkgs/development/python-modules/whisper/default.nix
+++ b/pkgs/development/python-modules/whisper/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "whisper";
-  version = "1.1.3";
+  version = "1.1.4";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1ahzsxk52ws8k3kdq52qbsbsx2r9z350j8gg9adw4x5fjwksz4r8";
+    sha256 = "ee9128873b5f9c97d258d35d0a32ef8e62c9da473fbbd056982df1f36f0b37aa";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/widgetsnbextension/default.nix b/pkgs/development/python-modules/widgetsnbextension/default.nix
index db992c7b932..ab2bd9c4eb1 100644
--- a/pkgs/development/python-modules/widgetsnbextension/default.nix
+++ b/pkgs/development/python-modules/widgetsnbextension/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "widgetsnbextension";
-  version = "3.4.0";
+  version = "3.4.2";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c9d6e426a1d79d132b57b93b368feba2c66eb7b0fd34bdb901716b4b88e94497";
+    sha256 = "fa618be8435447a017fd1bf2c7ae922d0428056cfc7449f7a8641edf76b48265";
   };
 
   propagatedBuildInputs = [ notebook ];
diff --git a/pkgs/development/python-modules/xarray/default.nix b/pkgs/development/python-modules/xarray/default.nix
index c443c8fc880..7a54b1f33ed 100644
--- a/pkgs/development/python-modules/xarray/default.nix
+++ b/pkgs/development/python-modules/xarray/default.nix
@@ -9,11 +9,11 @@
 
 buildPythonPackage rec {
   pname = "xarray";
-  version = "0.10.8";
+  version = "0.10.9";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "6a1f2c5dc5f639f8343f70ed08d0afbb477a3867298ef38f0d9bf4aafa0fb750";
+    sha256 = "cb3028ba157e1953fd279bbe17c07bb5faa459ddf555bbe687c927e4cdfeecc3";
   };
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/xml2rfc/default.nix b/pkgs/development/python-modules/xml2rfc/default.nix
index 291b981bf47..1338de7e67c 100644
--- a/pkgs/development/python-modules/xml2rfc/default.nix
+++ b/pkgs/development/python-modules/xml2rfc/default.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "xml2rfc";
-  version = "2.10.0";
+  version = "2.10.3";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "dc62e1d2fea896855ee0681f02bcb7596e3b6b5aa559348b8520a4eb0c793282";
+    sha256 = "ace45039e9d71713b4bb09ea199644797a7d884fbdd940e4c02559b4bccb01a1";
   };
 
   propagatedBuildInputs = [ intervaltree pyflakes requests lxml ];
diff --git a/pkgs/development/python-modules/xstatic-bootstrap/default.nix b/pkgs/development/python-modules/xstatic-bootstrap/default.nix
index 757c2cc240e..a474bf84d0f 100644
--- a/pkgs/development/python-modules/xstatic-bootstrap/default.nix
+++ b/pkgs/development/python-modules/xstatic-bootstrap/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "XStatic-Bootstrap";
-  version = "3.3.5.1";
+  version = "3.3.7.1";
 
   src = fetchPypi {
     inherit version pname;
-    sha256 = "0jzjq3d4vp2shd2n20f9y53jnnk1cvphkj1v0awgrf18qsy2bmin";
+    sha256 = "0c949e78e8cd77983fd803a68a98df0124e0c3a872fddb9ac8e6e5b4a487f131";
   };
 
   # no tests implemented
diff --git a/pkgs/development/python-modules/xstatic-jquery-ui/default.nix b/pkgs/development/python-modules/xstatic-jquery-ui/default.nix
index 1b884a97eb2..3424c8fcf6f 100644
--- a/pkgs/development/python-modules/xstatic-jquery-ui/default.nix
+++ b/pkgs/development/python-modules/xstatic-jquery-ui/default.nix
@@ -6,11 +6,11 @@
 
 buildPythonPackage rec {
   pname = "XStatic-jquery-ui";
-  version = "1.12.0.1";
+  version = "1.12.1.1";
 
   src = fetchPypi {
     inherit version pname;
-    sha256 = "0w7mabv6qflpd47g33j3ggp5rv17mqk0xz3bsdswcj97wqpga2l2";
+    sha256 = "d6ba48bb474420a8bcb2be02eef6ae96281ec24eff6befa54f04ebc9e4cc8910";
   };
 
   # no tests implemented
diff --git a/pkgs/development/python-modules/xstatic/default.nix b/pkgs/development/python-modules/xstatic/default.nix
index 02931215b8d..bbfcce54d89 100644
--- a/pkgs/development/python-modules/xstatic/default.nix
+++ b/pkgs/development/python-modules/xstatic/default.nix
@@ -5,11 +5,11 @@
 
 buildPythonPackage rec {
   pname = "XStatic";
-  version = "1.0.1";
+  version = "1.0.2";
 
   src = fetchPypi {
     inherit version pname;
-    sha256 = "09npcsyf1ccygjs0qc8kdsv4qqy8gm1m6iv63g9y1fgbcry3vj8f";
+    sha256 = "80b78dfe37bce6dee4343d64c65375a80bcf399b46dd47c0c7d56161568a23a8";
   };
 
   # no tests implemented
diff --git a/pkgs/development/python-modules/zetup/default.nix b/pkgs/development/python-modules/zetup/default.nix
index 8fc15c5da6f..99d05a35963 100644
--- a/pkgs/development/python-modules/zetup/default.nix
+++ b/pkgs/development/python-modules/zetup/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "zetup";
-  version = "0.2.43";
+  version = "0.2.45";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "ee92ba93a03336962525536f237ae0decf99a9b5d484ba34a3cf06ef017dae8e";
+    sha256 = "f1cde33d0ef3bedaf697e432201fa86da698dadd3445c0efd2a114753853c675";
   };
 
   checkPhase = ''