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| author | adisbladis <adisbladis@gmail.com> | 2018-01-15 21:27:37 +0800 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2018-01-15 21:27:37 +0800 |
| commit | 9c6e5b37bc55d4b1e02a1d3065717d6ed013aaa3 (patch) | |
| tree | 61f0849ecef2026f3e4e61f97f1c361188c9b3fa /pkgs | |
| parent | ffb383eca0dd56e1bb80d90657fac1eca583c30f (diff) | |
| parent | 245a67df8bc4f6e1fa0ab40578c1b9668599a042 (diff) | |
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Merge pull request #33883 from ashgillman/add-dcm2niix
dcm2niix: init at 1.0.20170130
Diffstat (limited to 'pkgs')
| -rw-r--r-- | pkgs/applications/science/biology/dcm2niix/default.nix | 33 | ||||
| -rw-r--r-- | pkgs/top-level/all-packages.nix | 2 |
2 files changed, 35 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/dcm2niix/default.nix b/pkgs/applications/science/biology/dcm2niix/default.nix new file mode 100644 index 00000000000..781ceb3df59 --- /dev/null +++ b/pkgs/applications/science/biology/dcm2niix/default.nix @@ -0,0 +1,33 @@ +{ stdenv +, fetchFromGitHub +, cmake +, libyamlcpp +}: + +stdenv.mkDerivation rec { + version = "1.0.20170130"; + name = "dcm2niix-${version}"; + + src = fetchFromGitHub { + owner = "rordenlab"; + repo = "dcm2niix"; + rev = "v${version}"; + sha256 = "1f2nzd8flp1rfn725bi64z7aw3ccxyyygzarxijw6pvgl476i532"; + }; + + enableParallelBuilding = true; + nativeBuildInputs = [ cmake ]; + buildInputs = [ libyamlcpp ]; + + meta = with stdenv.lib; { + description = "dcm2niix DICOM to NIfTI converter"; + longDescription = '' + dcm2niix is a designed to convert neuroimaging data from the + DICOM format to the NIfTI format. + ''; + homepage = https://www.nitrc.org/projects/dcm2nii; + license = licenses.bsd3; + maintainers = [ maintainers.ashgillman ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 2ce3ee5892a..4e60a9787c2 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -18844,6 +18844,8 @@ with pkgs; bcftools = callPackage ../applications/science/biology/bcftools { }; + dcm2niix = callPackage ../applications/science/biology/dcm2niix { }; + diamond = callPackage ../applications/science/biology/diamond { }; ecopcr = callPackage ../applications/science/biology/ecopcr { }; |