Merge remote-tracking branch 'upstream/master' into staging

4 files changed, 43 insertions, 170 deletions

diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 63a74435a77..c313bda5fca 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -1298,7 +1298,9 @@ with pkgs;
 
   mathics = pythonPackages.mathics;
 
-  masscan = callPackage ../tools/security/masscan { };
+  masscan = callPackage ../tools/security/masscan {
+    stdenv = gccStdenv;
+  };
 
   massren = callPackage ../tools/misc/massren { };
 
@@ -2769,6 +2771,11 @@ with pkgs;
 
   h2 = callPackage ../servers/h2 { };
 
+  h5utils = callPackage ../tools/misc/h5utils {
+    libmatheval = null;
+    hdf4 = null;
+  };
+
   haproxy = callPackage ../tools/networking/haproxy { };
 
   haveged = callPackage ../tools/security/haveged { };
@@ -4924,6 +4931,8 @@ with pkgs;
 
   ssss = callPackage ../tools/security/ssss { };
 
+  stabber = callPackage ../misc/stabber { };
+
   stress = callPackage ../tools/system/stress { };
 
   stress-ng = callPackage ../tools/system/stress-ng { };
@@ -8204,6 +8213,8 @@ with pkgs;
 
   texi2mdoc = callPackage ../tools/misc/texi2mdoc { };
 
+  todolist = callPackage ../applications/misc/todolist { };
+
   travis = callPackage ../development/tools/misc/travis { };
 
   tweak = callPackage ../applications/editors/tweak { };
@@ -9919,7 +9930,9 @@ with pkgs;
 
   libplist = callPackage ../development/libraries/libplist { };
 
-  libqglviewer = callPackage ../development/libraries/libqglviewer { };
+  libqglviewer = callPackage ../development/libraries/libqglviewer {
+    inherit (darwin.apple_sdk.frameworks) AGL;
+  };
 
   libre = callPackage ../development/libraries/libre {};
   librem = callPackage ../development/libraries/librem {};
@@ -12578,9 +12591,9 @@ with pkgs;
 
   qboot = callPackage ../applications/virtualization/qboot { stdenv = stdenv_32bit; };
 
-  OVMF = callPackage ../applications/virtualization/OVMF { seabios=false; openssl=null; };
-  OVMF-CSM = callPackage ../applications/virtualization/OVMF { openssl=null; };
-  #WIP: OVMF-secureBoot = callPackage ../applications/virtualization/OVMF { seabios=false; secureBoot=true; };
+  OVMF = callPackage ../applications/virtualization/OVMF { seabios = null; openssl = null; };
+  OVMF-CSM = callPackage ../applications/virtualization/OVMF { openssl = null; };
+  #WIP: OVMF-secureBoot = callPackage ../applications/virtualization/OVMF { seabios = null; secureBoot = true; };
 
   seabios = callPackage ../applications/virtualization/seabios { };
 
@@ -16603,7 +16616,9 @@ with pkgs;
 
   mod-distortion = callPackage ../applications/audio/mod-distortion { };
 
-  monero = callPackage ../applications/altcoins/monero { };
+  monero = callPackage ../applications/altcoins/monero {
+    inherit (darwin.apple_sdk.frameworks) IOKit;
+  };
 
   monero-gui = libsForQt5.callPackage ../applications/altcoins/monero-gui { };
 
@@ -17016,9 +17031,7 @@ with pkgs;
 
   ncpamixer = callPackage ../applications/audio/ncpamixer { };
 
-  pan = callPackage ../applications/networking/newsreaders/pan {
-    spellChecking = false;
-  };
+  pan = callPackage ../applications/networking/newsreaders/pan { };
 
   panotools = callPackage ../applications/graphics/panotools { };
 
@@ -19469,7 +19482,10 @@ with pkgs;
   };
 
   xfce = xfce4-12;
+  xfceUnstable = xfce4-13;
+
   xfce4-12 = recurseIntoAttrs (callPackage ../desktops/xfce { });
+  xfce4-13 = recurseIntoAttrs (callPackage ../desktops/xfce4-13 { });
 
   xrandr-invert-colors = callPackage ../applications/misc/xrandr-invert-colors { };
 
@@ -20286,7 +20302,10 @@ with pkgs;
 
   foomatic-filters = callPackage ../misc/drivers/foomatic-filters {};
 
-  gajim = callPackage ../applications/networking/instant-messengers/gajim { };
+  gajim = python3.pkgs.callPackage ../applications/networking/instant-messengers/gajim {
+    inherit (gst_all_1) gstreamer gst-plugins-base gst-libav gst-plugins-ugly;
+    inherit (gnome3) gspell;
+  };
 
   gammu = callPackage ../applications/misc/gammu { };
 
diff --git a/pkgs/top-level/default.nix b/pkgs/top-level/default.nix
index 9cf9eb4db65..da7fc1bed34 100644
--- a/pkgs/top-level/default.nix
+++ b/pkgs/top-level/default.nix
@@ -22,9 +22,9 @@
   # `*Platform`s.
   localSystem
 
-  # The system packages will ultimately be run on. Null if the two should be the
+, # The system packages will ultimately be run on. Null if the two should be the
   # same.
-, crossSystem ? null
+  crossSystem ? null
 
 , # Allow a configuration attribute set to be passed in as an argument.
   config ? {}
diff --git a/pkgs/top-level/lua-packages.nix b/pkgs/top-level/lua-packages.nix
index 75f2ab9e582..0cc4482f402 100644
--- a/pkgs/top-level/lua-packages.nix
+++ b/pkgs/top-level/lua-packages.nix
@@ -696,13 +696,13 @@ let
 
   lgi = stdenv.mkDerivation rec {
     name = "lgi-${version}";
-    version = "0.9.1";
+    version = "0.9.2";
 
     src = fetchFromGitHub {
       owner = "pavouk";
       repo = "lgi";
       rev = version;
-      sha256 = "09pbapjhyc3sn0jgx747shqr9286wqfzw02h43p4pk8fv2b766b9";
+      sha256 = "03rbydnj411xpjvwsyvhwy4plm96481d7jax544mvk7apd8sd5jj";
     };
 
     nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 64c92056c5f..b0beece2982 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -3657,32 +3657,7 @@ in {
 
   decorator = callPackage ../development/python-modules/decorator { };
 
-  deform = buildPythonPackage rec {
-    name = "deform-2.0a2";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/d/deform/${name}.tar.gz";
-      sha256 = "3fa4d287c8da77a83556e4a5686de006ddd69da359272120b915dc8f5a70cabd";
-    };
-
-    buildInputs = with self; [] ++ optional isPy26 unittest2;
-
-    propagatedBuildInputs =
-      [ self.beautifulsoup4
-        self.peppercorn
-        self.colander
-        self.translationstring
-        self.chameleon
-        self.zope_deprecation
-        self.coverage
-        self.nose
-      ];
-
-    meta = {
-      maintainers = with maintainers; [ garbas domenkozar ];
-      platforms = platforms.all;
-    };
-  };
+  deform = callPackage ../development/python-modules/deform { };
 
   demjson = callPackage ../development/python-modules/demjson { };
 
@@ -5027,6 +5002,8 @@ in {
 
   JPype1 = callPackage ../development/python-modules/JPype1 {};
 
+  josepy = callPackage ../development/python-modules/josepy {};
+
   jsbeautifier = callPackage ../development/python-modules/jsbeautifier {};
 
   jug = callPackage ../development/python-modules/jug {};
@@ -6330,23 +6307,7 @@ in {
 
   schema = callPackage ../development/python-modules/schema {};
 
-  stem = buildPythonPackage rec {
-    name = "stem-${version}";
-    version = "1.6.0";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/s/stem/${name}.tar.gz";
-      sha256 = "1va9p3ij7lxg6ixfsvaql06dn11l3fgpxmss1dhlvafm7sqizznp";
-    };
-
-    meta = {
-      description = "Controller library that allows applications to interact with Tor (https://www.torproject.org/";
-      homepage = https://stem.torproject.org/;
-      license = licenses.gpl3;
-      maintainers = with maintainers; [ phreedom ];
-    };
-
-  };
+  stem = callPackage ../development/python-modules/stem { };
 
   svg-path = callPackage ../development/python-modules/svg-path { };
 
@@ -6874,52 +6835,7 @@ in {
     };
   };
 
-  django_pipeline = buildPythonPackage rec {
-    name = "django-pipeline-${version}";
-    version = "1.5.1";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/d/django-pipeline/${name}.tar.gz";
-      sha256 = "1y49fa8jj7x9qjj5wzhns3zxwj0s73sggvkrv660cqw5qb7d8hha";
-    };
-
-    propagatedBuildInputs = with self; [ django futures ];
-
-    meta = with stdenv.lib; {
-      description = "Pipeline is an asset packaging library for Django";
-      homepage = https://github.com/cyberdelia/django-pipeline;
-      license = stdenv.lib.licenses.mit;
-    };
-  };
-
-  django_pipeline_1_3 = self.django_pipeline.overrideDerivation (super: rec {
-    name = "django-pipeline-1.3.27";
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/d/django-pipeline/${name}.tar.gz";
-      sha256 = "0iva3cmnh5jw54c7w83nx9nqv523hjvkbjchzd2pb6vzilxf557k";
-    };
-  });
-
-
-  djblets = if (versionOlder self.django.version "1.6.11") ||
-               (versionAtLeast self.django.version "1.9")
-            then throw "djblets only suported for Django<1.8.999,>=1.6.11"
-            else buildPythonPackage rec {
-    name = "Djblets-0.9";
-
-    src = pkgs.fetchurl {
-      url = "http://downloads.reviewboard.org/releases/Djblets/0.9/${name}.tar.gz";
-      sha256 = "1rr5vjwiiw3kih4k9nawislf701l838dbk5xgizadvwp6lpbpdpl";
-    };
-
-    propagatedBuildInputs = with self; [
-      django feedparser django_pipeline_1_3 pillowfight pytz ];
-
-    meta = {
-      description = "A collection of useful extensions for Django";
-      homepage = https://github.com/djblets/djblets;
-    };
-  };
+  django_pipeline = callPackage ../development/python-modules/django-pipeline { };
 
   dj-database-url = callPackage ../development/python-modules/dj-database-url { };
 
@@ -8895,24 +8811,8 @@ in {
 
   keyutils = callPackage ../development/python-modules/keyutils { };
 
-  klein = buildPythonPackage rec {
-    name = "klein-15.3.1";
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/k/klein/${name}.tar.gz";
-      sha256 = "1hl2psnn1chm698rimyn9dgcpl1mxgc8dj11b3ipp8z37yfjs3z9";
-    };
-
-    disabled = isPy3k;
-
-    propagatedBuildInputs = with self; [ werkzeug twisted ];
-
-    meta = {
-      description = "Klein Web Micro-Framework";
-      homepage    = "https://github.com/twisted/klein";
-      license     = licenses.mit;
-    };
-  };
-
+  klein = callPackage ../development/python-modules/klein { };
+ 
   koji = callPackage ../development/python-modules/koji { };
 
   kombu = buildPythonPackage rec {
@@ -11245,34 +11145,7 @@ in {
     };
   };
 
-  WSME = buildPythonPackage rec {
-    name = "WSME-${version}";
-    version = "0.8.0";
-
-    src = pkgs.fetchurl {
-      url = "mirror://pypi/W/WSME/${name}.tar.gz";
-      sha256 = "1nw827iz5g9jlfnfbdi8kva565v0kdjzba2lccziimj09r71w900";
-    };
-
-    checkPhase = ''
-      # remove turbogears tests as we don't have it packaged
-      rm tests/test_tg*
-      # remove flask since we don't have flask-restful
-      rm tests/test_flask*
-      # https://bugs.launchpad.net/wsme/+bug/1510823
-      ${if isPy3k then "rm tests/test_cornice.py" else ""}
-
-      nosetests tests/
-    '';
-
-    propagatedBuildInputs = with self; [
-      pbr six simplegeneric netaddr pytz webob
-    ];
-    buildInputs = with self; [
-      cornice nose webtest pecan transaction cherrypy sphinx
-    ];
-  };
-
+  WSME = callPackage ../development/python-modules/WSME { };
 
   zake = buildPythonPackage rec {
     name = "zake-${version}";
@@ -14402,27 +14275,6 @@ in {
 
   django-multiselectfield = callPackage ../development/python-modules/django-multiselectfield { };
 
-  reviewboard = buildPythonPackage rec {
-    name = "ReviewBoard-2.5.1.1";
-
-    src = pkgs.fetchurl {
-      url = "http://downloads.reviewboard.org/releases/ReviewBoard/2.5/${name}.tar.gz";
-      sha256 = "14m8yy2aqxnnzi822b797wc9nmkfkp2fqmq24asdnm66bxhyzjwn";
-    };
-
-    patchPhase = ''
-      sed -i 's/mimeparse/python-mimeparse/' setup.py
-      sed -i 's/markdown>=2.4.0,<2.4.999/markdown/' setup.py
-    '';
-
-    propagatedBuildInputs = with self;
-      [ django recaptcha_client pytz memcached dateutil_1_5 paramiko flup
-        pygments djblets django_evolution pycrypto pysvn pillow
-        psycopg2 django-haystack python_mimeparse markdown django-multiselectfield
-      ];
-  };
-
-
   rdflib = callPackage ../development/python-modules/rdflib { };
 
   isodate = buildPythonPackage rec {
@@ -15019,6 +14871,8 @@ in {
     };
   };
 
+  slimit = callPackage ../development/python-modules/slimit { };
+
   slob = buildPythonPackage rec {
     name = "slob-unstable-2016-11-03";