Adding Julia 0.3.0: some progress, but doesn't work yet

2 files changed, 191 insertions, 0 deletions

diff --git a/pkgs/development/compilers/julia/0.3.0.nix b/pkgs/development/compilers/julia/0.3.0.nix
new file mode 100644
index 00000000000..4eb64aea534
--- /dev/null
+++ b/pkgs/development/compilers/julia/0.3.0.nix
@@ -0,0 +1,143 @@
+{ stdenv, fetchgit, gfortran, perl, m4, llvm, gmp, pcre, zlib
+ , readline, fftwSinglePrec, fftw, libunwind, suitesparse, glpk, fetchurl
+ , ncurses, libunistring, lighttpd, patchelf, openblas, liblapack
+ , tcl, tk, xproto, libX11, git, mpfr, which
+ } :
+let
+  realGcc = stdenv.gcc.gcc;
+in
+stdenv.mkDerivation rec {
+  pname = "julia";
+  version = "0.3.0";
+  name = "${pname}-${version}";
+
+  dsfmt_ver = "2.2";
+  grisu_ver = "1.1.1";
+  openblas_ver = "v0.2.10";
+  lapack_ver = "3.5.0";
+  arpack_ver = "3.1.5";
+  lighttpd_ver = "1.4.29";
+  patchelf_ver = "0.6";
+  pcre_ver = "8.31";
+  utf8proc_ver = "1.1.6";
+
+  dsfmt_src = fetchurl {
+    url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmt_ver}.tar.gz";
+    name = "dsfmt-${dsfmt_ver}.tar.gz";
+    sha256 = "bc3947a9b2253a869fcbab8ff395416cb12958be9dba10793db2cd7e37b26899";
+  };
+  grisu_src = fetchurl {
+    url = "http://double-conversion.googlecode.com/files/double-conversion-${grisu_ver}.tar.gz";
+    sha256 = "e1cabb73fd69e74f145aea91100cde483aef8b79dc730fcda0a34466730d4d1d";
+  };
+  openblas_src = fetchurl {
+    url = "https://github.com/xianyi/OpenBLAS/tarball/${openblas_ver}";
+    name = "openblas-${openblas_ver}.tar.gz";
+    sha256 = "19ffec70f9678f5c159feadc036ca47720681b782910fbaa95aa3867e7e86d8e";
+  };
+  arpack_src = fetchurl rec {
+    url = "http://forge.scilab.org/index.php/p/arpack-ng/downloads/get/arpack-ng_${arpack_ver}.tar.gz";
+    sha256 = "05fmg4m0yri47rzgsl2mnr1qbzrs7qyd557p3v9wwxxw0rwcwsd2";
+  };
+  lapack_src = fetchurl {
+    url = "http://www.netlib.org/lapack/lapack-${lapack_ver}.tgz";
+    name = "lapack-${lapack_ver}.tgz";
+    sha256 = "93b910f94f6091a2e71b59809c4db4a14655db527cfc5821ade2e8c8ab75380f";
+  };
+  lighttpd_src = fetchurl {
+    url = "http://download.lighttpd.net/lighttpd/releases-1.4.x/lighttpd-${lighttpd_ver}.tar.gz";
+    sha256 = "ff9f4de3901d03bb285634c5b149191223d17f1c269a16c863bac44238119c85";
+  };
+  patchelf_src = fetchurl {
+    url = "http://hydra.nixos.org/build/1524660/download/2/patchelf-${patchelf_ver}.tar.bz2";
+    sha256 = "00bw29vdsscsili65wcb5ay0gvg1w0ljd00sb5xc6br8bylpyzpw";
+  };
+  pcre_src = fetchurl {
+    url = "ftp://ftp.csx.cam.ac.uk/pub/software/programming/pcre/pcre-${pcre_ver}.tar.bz2";
+    sha256 = "0g4c0z4h30v8g8qg02zcbv7n67j5kz0ri9cfhgkpwg276ljs0y2p";
+  };
+  utf8proc_src = fetchurl {
+    url = "http://www.public-software-group.org/pub/projects/utf8proc/v${utf8proc_ver}/utf8proc-v${utf8proc_ver}.tar.gz";
+    sha256 = "1rwr84pw92ajjlbcxq0da7yxgg3ijngmrj7vhh2qzsr2h2kqzp7y";
+  };
+
+  src = fetchgit {
+    url = "git://github.com/JuliaLang/julia.git";
+    rev = "refs/tags/v0.3.0";
+    sha256 = "1h7icqjiccw26f81r1zwsv31kk6yhavn038h7jp63iv5sdzh5r8i";
+  };
+
+  buildInputs = [ gfortran perl m4 gmp pcre llvm readline zlib
+    fftw fftwSinglePrec libunwind suitesparse glpk ncurses libunistring patchelf
+    openblas liblapack tcl tk xproto libX11 git mpfr which
+    ];
+
+  configurePhase = ''
+    for i in GMP LLVM PCRE LAPACK OPENBLAS BLAS READLINE FFTW LIBUNWIND SUITESPARSE GLPK LIGHTTPD ZLIB MPFR;
+    do
+      makeFlags="$makeFlags USE_SYSTEM_$i=1 "
+    done
+
+    copy_kill_hash(){
+      cp "$1" "$2/$(basename "$1" | sed -e 's/^[a-z0-9]*-//')"
+    }
+
+    for i in "${grisu_src}" "${dsfmt_src}" "${arpack_src}" "${patchelf_src}" "${pcre_src}" "${utf8proc_src}"; do
+      copy_kill_hash "$i" deps
+    done
+
+    ${if realGcc ==null then "" else 
+    ''export NIX_LDFLAGS="$NIX_LDFLAGS -L${realGcc}/lib -L${realGcc}/lib64 -lpcre -llapack -lm -lfftw3f -lfftw3 -lglpk -lunistring -lz -lgmp -lmpfr"''}
+    export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -fPIC "
+
+    export LDFLAGS="-L${suitesparse}/lib -L$out/lib/julia -Wl,-rpath,$out/lib/julia"
+
+    export GLPK_PREFIX="${glpk}/include"
+
+    mkdir -p "$out/lib"
+    sed -e "s@/usr/local/lib@$out/lib@g" -i deps/Makefile
+    sed -e "s@/usr/lib@$out/lib@g" -i deps/Makefile
+
+    export makeFlags="$makeFlags PREFIX=$out SHELL=${stdenv.shell} prefix=$out"
+
+    export dontPatchELF=1
+
+    export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:$PWD/usr/lib:$PWD/usr/lib/julia"
+
+    patchShebangs . contrib
+  '';
+
+  preBuild = ''
+    mkdir -p usr/lib
+    
+    echo "$out"
+    mkdir -p "$out/lib"
+    (
+    cd "$(mktemp -d)"
+    for i in "${suitesparse}"/lib/lib*.a; do
+      ar -x $i
+    done
+    gcc *.o --shared -o "$out/lib/libsuitesparse.so"
+    )
+    cp "$out/lib/libsuitesparse.so" usr/lib
+    for i in umfpack cholmod amd camd colamd spqr; do
+      ln -s libsuitesparse.so "$out"/lib/lib$i.so;
+      ln -s libsuitesparse.so "usr"/lib/lib$i.so;
+    done
+  '';
+
+  enableParallelBuilding = false;
+
+  postInstall = ''
+    rm -f "$out"/lib/julia/sys.{so,dylib,dll}
+  '';
+
+  meta = {
+    description = "High-level performance-oriented dynamical language for technical computing";
+    homepage = "http://julialang.org/";
+    license = stdenv.lib.licenses.mit;
+    maintainers = [ stdenv.lib.maintainers.raskin ];
+    platforms = with stdenv.lib.platforms; linux;
+    broken = true;
+  };
+}
diff --git a/pkgs/development/libraries/science/math/liblapack/3.5.0.nix b/pkgs/development/libraries/science/math/liblapack/3.5.0.nix
new file mode 100644
index 00000000000..b2167449a2f
--- /dev/null
+++ b/pkgs/development/libraries/science/math/liblapack/3.5.0.nix
@@ -0,0 +1,48 @@
+{ stdenv, fetchurl, gfortran, atlas, cmake, python, shared ? false }:
+let
+  atlasMaybeShared = atlas.override { inherit shared; };
+  usedLibExtension = if shared then ".so" else ".a";
+in
+stdenv.mkDerivation rec {
+  version = "3.5.0";
+  name = "liblapack-${version}";
+  src = fetchurl {
+    url = "http://www.netlib.org/lapack/lapack-${version}.tgz";
+    sha256 = "0lk3f97i9imqascnlf6wr5mjpyxqcdj73pgj97dj2mgvyg9z1n4s";
+  };
+
+  propagatedBuildInputs = [ atlasMaybeShared ];
+  buildInputs = [ gfortran cmake ];
+  nativeBuildInputs = [ python ];
+
+  cmakeFlags = [
+    "-DUSE_OPTIMIZED_BLAS=ON"
+    "-DBLAS_ATLAS_f77blas_LIBRARY=${atlasMaybeShared}/lib/libf77blas${usedLibExtension}"
+    "-DBLAS_ATLAS_atlas_LIBRARY=${atlasMaybeShared}/lib/libatlas${usedLibExtension}"
+    "-DCMAKE_Fortran_FLAGS=-fPIC"
+  ]
+  ++ (stdenv.lib.optional shared "-DBUILD_SHARED_LIBS=ON")
+  ;
+
+  doCheck = ! shared;
+
+  checkPhase = "
+    sed -i 's,^#!.*,#!${python}/bin/python,' lapack_testing.py
+    ctest
+  ";
+
+  enableParallelBuilding = true;
+
+  passthru = {
+    blas = atlas;
+  };
+
+  meta = {
+    description = "Linear Algebra PACKage";
+    homepage = "http://www.netlib.org/lapack/";
+    license = "revised-BSD";
+
+    platforms = stdenv.lib.platforms.all;
+    maintainers = [ stdenv.lib.maintainers.simons ];
+  };
+}