Merge master into staging-next

10 files changed, 36 insertions, 22 deletions

diff --git a/pkgs/development/interpreters/janet/default.nix b/pkgs/development/interpreters/janet/default.nix
index 4601faafb06..098a7fe7d3a 100644
--- a/pkgs/development/interpreters/janet/default.nix
+++ b/pkgs/development/interpreters/janet/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "janet";
-  version = "1.21.1";
+  version = "1.21.2";
 
   src = fetchFromGitHub {
     owner = "janet-lang";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-wJwlGliXoj0XmC9qb6SCo8mUy4aqHvJtFiigUB7PFLE=";
+    sha256 = "sha256-6E726+DLs1hCUbr2/rqIdSn8u94LLFdKBBHkbB4rgm0=";
   };
 
   # This release fails the test suite on darwin, remove when debugged.
diff --git a/pkgs/development/libraries/igraph/default.nix b/pkgs/development/libraries/igraph/default.nix
index 441646c4395..8402aae9819 100644
--- a/pkgs/development/libraries/igraph/default.nix
+++ b/pkgs/development/libraries/igraph/default.nix
@@ -12,7 +12,9 @@
 , lapack
 , libxml2
 , libxslt
+, llvmPackages
 , pkg-config
+, plfit
 , python3
 , sourceHighlight
 , suitesparse
@@ -30,10 +32,6 @@ stdenv.mkDerivation rec {
     sha256 = "sha256-SL9PcT18vFvykCv4VRXxXtlcDAcybmwEImnnKXMciFQ=";
   };
 
-  # Normally, igraph wants us to call bootstrap.sh, which will call
-  # tools/getversion.sh. Instead, we're going to put the version directly
-  # where igraph wants, and then let autoreconfHook do the rest of the
-  # bootstrap. ~ C.
   postPatch = ''
     echo "${version}" > IGRAPH_VERSION
   '' + lib.optionalString stdenv.isAarch64 ''
@@ -65,7 +63,10 @@ stdenv.mkDerivation rec {
     gmp
     lapack
     libxml2
+    plfit
     suitesparse
+  ] ++ lib.optionals stdenv.cc.isClang [
+    llvmPackages.openmp
   ];
 
   cmakeFlags = [
@@ -75,8 +76,10 @@ stdenv.mkDerivation rec {
     "-DIGRAPH_USE_INTERNAL_GLPK=OFF"
     "-DIGRAPH_USE_INTERNAL_CXSPARSE=OFF"
     "-DIGRAPH_USE_INTERNAL_GMP=OFF"
+    "-DIGRAPH_USE_INTERNAL_PLFIT=OFF"
     "-DIGRAPH_GLPK_SUPPORT=ON"
     "-DIGRAPH_GRAPHML_SUPPORT=ON"
+    "-DIGRAPH_OPENMP_SUPPORT=ON"
     "-DIGRAPH_ENABLE_LTO=AUTO"
     "-DIGRAPH_ENABLE_TLS=ON"
     "-DBUILD_SHARED_LIBS=ON"
diff --git a/pkgs/development/libraries/nlopt/default.nix b/pkgs/development/libraries/nlopt/default.nix
index 279c8a0fd05..2fae17a2323 100644
--- a/pkgs/development/libraries/nlopt/default.nix
+++ b/pkgs/development/libraries/nlopt/default.nix
@@ -1,4 +1,4 @@
-{ lib, stdenv, fetchFromGitHub, cmake, octave ? null }:
+{ lib, stdenv, fetchFromGitHub, cmake, octave ? null, libiconv }:
 
 stdenv.mkDerivation rec {
   pname = "nlopt";
@@ -11,7 +11,7 @@ stdenv.mkDerivation rec {
     sha256 = "sha256-TgieCX7yUdTAEblzXY/gCN0r6F9TVDh4RdNDjQdXZ1o=";
   };
 
-  nativeBuildInputs = [ cmake ];
+  nativeBuildInputs = [ cmake ] ++ lib.optionals stdenv.isDarwin [ libiconv ];
   buildInputs = [ octave ];
 
   configureFlags = [
diff --git a/pkgs/development/python-modules/adafruit-platformdetect/default.nix b/pkgs/development/python-modules/adafruit-platformdetect/default.nix
index 2671c25e59f..921c844e27d 100644
--- a/pkgs/development/python-modules/adafruit-platformdetect/default.nix
+++ b/pkgs/development/python-modules/adafruit-platformdetect/default.nix
@@ -6,13 +6,13 @@
 
 buildPythonPackage rec {
   pname = "adafruit-platformdetect";
-  version = "3.22.0";
+  version = "3.22.1";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "Adafruit-PlatformDetect";
     inherit version;
-    sha256 = "sha256-XnB6aSTKRV72WjcXx9jPZ+FGmCNh6dvwiau7WDlyE5M=";
+    sha256 = "sha256-fOBs0aPekIvpwbrYxzh1wz7EKGko0Je1f/N5H0DIguw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/graphviz/default.nix b/pkgs/development/python-modules/graphviz/default.nix
index 881dec6b932..46a541fe504 100644
--- a/pkgs/development/python-modules/graphviz/default.nix
+++ b/pkgs/development/python-modules/graphviz/default.nix
@@ -1,4 +1,5 @@
 { lib
+, stdenv
 , buildPythonPackage
 , pythonOlder
 , fetchFromGitHub
@@ -58,6 +59,9 @@ buildPythonPackage rec {
     runHook postCheck
   '';
 
+  # Too many failures due to attempting to connect to com.apple.fonts daemon
+  doCheck = !stdenv.isDarwin;
+
   meta = with lib; {
     description = "Simple Python interface for Graphviz";
     homepage = "https://github.com/xflr6/graphviz";
diff --git a/pkgs/development/python-modules/nodeenv/default.nix b/pkgs/development/python-modules/nodeenv/default.nix
index d88661ae757..1ff2d47b32d 100644
--- a/pkgs/development/python-modules/nodeenv/default.nix
+++ b/pkgs/development/python-modules/nodeenv/default.nix
@@ -1,4 +1,4 @@
-{ lib, buildPythonPackage, fetchPypi, setuptools }:
+{ lib, buildPythonPackage, fetchPypi, setuptools, python, which }:
 
 buildPythonPackage rec {
   pname = "nodeenv";
@@ -16,6 +16,13 @@ buildPythonPackage rec {
   # Tests not included in PyPI tarball
   doCheck = false;
 
+  preFixup = ''
+    substituteInPlace $out/${python.sitePackages}/nodeenv.py \
+      --replace '["which", candidate]' '["${lib.getBin which}/bin/which", candidate]'
+  '';
+
+  pythonImportsCheck = [ "nodeenv" ];
+
   meta = with lib; {
     description = "Node.js virtual environment builder";
     homepage = "https://github.com/ekalinin/nodeenv";
diff --git a/pkgs/development/python-modules/pypandoc/default.nix b/pkgs/development/python-modules/pypandoc/default.nix
index 32bada43c15..8e46be2697c 100644
--- a/pkgs/development/python-modules/pypandoc/default.nix
+++ b/pkgs/development/python-modules/pypandoc/default.nix
@@ -4,11 +4,11 @@
 
 buildPythonPackage rec {
   pname = "pypandoc";
-  version = "1.7.4";
+  version = "1.7.5";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-KN4j9kbZ6ARAPGth180yptdso1arx563IXvb/2dI+G4=";
+    sha256 = "sha256-gCwmquF7ZBNsbQBpSdjOGDp9TZ+9Ty0FHmb0+59FylA=";
   };
 
   patches = [
diff --git a/pkgs/development/tools/misc/grcov/default.nix b/pkgs/development/tools/misc/grcov/default.nix
index 04ed4a1046b..2ca092fa659 100644
--- a/pkgs/development/tools/misc/grcov/default.nix
+++ b/pkgs/development/tools/misc/grcov/default.nix
@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "grcov";
-  version = "0.8.8";
+  version = "0.8.9";
 
   src = fetchFromGitHub {
     owner = "mozilla";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-OITtZdI9d5zQVI02s5gJF9lWCjZZgE7YZRfFROU040o=";
+    sha256 = "sha256-VSjKZoK/o05kYX5mRCnaS6r/+4dZep9Bp9Im1Zw7piM=";
   };
 
-  cargoSha256 = "sha256-AZVkS/huEsA1wdVB/xUGCCjY5AWJxaU1DD/OlEURw/c=";
+  cargoSha256 = "sha256-7I0BizeDbikpog0YG/X8vwoO4PGE1qYzRTWTr0RUQws=";
 
   # tests do not find grcov path correctly
   checkFlags = let
diff --git a/pkgs/development/tools/rust/cargo-flash/default.nix b/pkgs/development/tools/rust/cargo-flash/default.nix
index 0f90f480043..49e9bbaceb5 100644
--- a/pkgs/development/tools/rust/cargo-flash/default.nix
+++ b/pkgs/development/tools/rust/cargo-flash/default.nix
@@ -10,16 +10,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "cargo-flash";
-  version = "0.12.0";
+  version = "0.12.1";
 
   src = fetchFromGitHub {
     owner = "probe-rs";
     repo = pname;
     rev = "v${version}";
-    sha256 = "0s49q8x0iscy9rgn9zgymyg39cqm251a99m341znjn55lap3pdl8";
+    sha256 = "sha256-bd0TY8bdpLHLCdDQgJeJvqjAcSF67+LGSNx8yafYbys=";
   };
 
-  cargoSha256 = "0rb4s5bwjs7hri636r2viva96a6z9qjv9if6i220j9yglrvi7c8i";
+  cargoSha256 = "sha256-bx2N8zP7BmqU6oM/7Nf2i9S1uNWItReQMD59vtG1RKE=";
 
   nativeBuildInputs = [ pkg-config rustfmt ];
   buildInputs = [ libusb1 ] ++ lib.optionals stdenv.isDarwin [ AppKit ];
diff --git a/pkgs/development/tools/sentry-cli/default.nix b/pkgs/development/tools/sentry-cli/default.nix
index 2fb0f1ebbeb..0ba8e3b3d31 100644
--- a/pkgs/development/tools/sentry-cli/default.nix
+++ b/pkgs/development/tools/sentry-cli/default.nix
@@ -9,13 +9,13 @@
 }:
 rustPlatform.buildRustPackage rec {
   pname = "sentry-cli";
-  version = "1.74.2";
+  version = "1.74.3";
 
   src = fetchFromGitHub {
     owner = "getsentry";
     repo = "sentry-cli";
     rev = version;
-    sha256 = "sha256-1A/c5HiXtT6xUTxVInv9DbbCsqpu8iCJ7I0A9wFeaQ0=";
+    sha256 = "sha256-savbS/1j6PJqmkk6c+XMOUEkrLZNU2p0YbN8rHfz2po=";
   };
   doCheck = false;
 
@@ -25,7 +25,7 @@ rustPlatform.buildRustPackage rec {
   buildInputs = [ openssl ] ++ lib.optionals stdenv.isDarwin [ Security SystemConfiguration ];
   nativeBuildInputs = [ pkg-config ];
 
-  cargoSha256 = "sha256-z++t+Zt40az11z/xhobvvbbSNUBpnMzqlRzoOuYgY2U=";
+  cargoSha256 = "sha256-7B8cmrDYufhlIMv2r6TSD+C8NLE2Juewgy4XYYr+QKs=";
 
   meta = with lib; {
     homepage = "https://docs.sentry.io/cli/";