Merge master into staging-next

33 files changed, 413 insertions, 369 deletions

diff --git a/pkgs/applications/audio/linuxsampler/default.nix b/pkgs/applications/audio/linuxsampler/default.nix
index 26fc2408d8a..f13f10d15e8 100644
--- a/pkgs/applications/audio/linuxsampler/default.nix
+++ b/pkgs/applications/audio/linuxsampler/default.nix
@@ -3,11 +3,11 @@
 
 stdenv.mkDerivation rec {
   pname = "linuxsampler";
-  version = "2.1.0";
+  version = "2.1.1";
 
   src = fetchurl {
     url = "https://download.linuxsampler.org/packages/${pname}-${version}.tar.bz2";
-    sha256 = "0fdxpw7jjfi058l95131d6d8538h05z7n94l60i6mhp9xbplj2jf";
+    sha256 = "1gijf50x5xbpya5dj3v2mzj7azx4qk9p012csgddp73f0qi0n190";
   };
 
   preConfigure = ''
diff --git a/pkgs/applications/audio/lollypop/default.nix b/pkgs/applications/audio/lollypop/default.nix
index 73d8d350f38..c967576a5aa 100644
--- a/pkgs/applications/audio/lollypop/default.nix
+++ b/pkgs/applications/audio/lollypop/default.nix
@@ -71,9 +71,8 @@ python3.pkgs.buildPythonApplication rec  {
     patchShebangs meson_post_install.py
   '';
 
-  preFixup = ''
-    buildPythonPath "$out $propagatedBuildInputs"
-    patchPythonScript "$out/libexec/lollypop-sp"
+  postFixup = ''
+    wrapPythonProgramsIn $out/libexec "$out $propagatedBuildInputs"
   '';
 
   # Produce only one wrapper using wrap-python passing
diff --git a/pkgs/applications/audio/ncmpc/default.nix b/pkgs/applications/audio/ncmpc/default.nix
index d89b61aa21f..4fa9626332b 100644
--- a/pkgs/applications/audio/ncmpc/default.nix
+++ b/pkgs/applications/audio/ncmpc/default.nix
@@ -3,13 +3,13 @@
 
 stdenv.mkDerivation rec {
   pname = "ncmpc";
-  version = "0.34";
+  version = "0.35";
 
   src = fetchFromGitHub {
     owner  = "MusicPlayerDaemon";
     repo   = "ncmpc";
     rev    = "v${version}";
-    sha256 = "0ffby37qdg251c1w0vl6rmd13akbydnf12468z4vrl0ybwfd7fc4";
+    sha256 = "0hhc5snxy5fbg47ynz4b7fkmzdy974zxqr0cqc6kh15yvbr25ikh";
   };
 
   buildInputs = [ glib ncurses mpd_clientlib boost ];
diff --git a/pkgs/applications/audio/pulseaudio-ctl/default.nix b/pkgs/applications/audio/pulseaudio-ctl/default.nix
index 1ad57efda7a..6b7d242e1f6 100644
--- a/pkgs/applications/audio/pulseaudio-ctl/default.nix
+++ b/pkgs/applications/audio/pulseaudio-ctl/default.nix
@@ -7,13 +7,13 @@ let
 
 in stdenv.mkDerivation rec {
   name = "${pname}-${version}";
-  version = "1.66";
+  version = "1.67";
 
   src = fetchFromGitHub {
     owner = "graysky2";
     repo = pname;
     rev = "v${version}";
-    sha256 = "19a24w7y19551ar41q848w7r1imqkl9cpff4dpb7yry7qp1yjg0y";
+    sha256 = "1mf5r7x6aiqmx9mz7gpckrqvvzxnr5gs2q1k4m42rjk6ldkpdb46";
   };
 
   postPatch = ''
diff --git a/pkgs/applications/audio/pulseeffects/default.nix b/pkgs/applications/audio/pulseeffects/default.nix
index 83fb17189e1..2a68f9a64f2 100644
--- a/pkgs/applications/audio/pulseeffects/default.nix
+++ b/pkgs/applications/audio/pulseeffects/default.nix
@@ -47,13 +47,13 @@ let
   ];
 in stdenv.mkDerivation rec {
   pname = "pulseeffects";
-  version = "4.6.6";
+  version = "4.6.8";
 
   src = fetchFromGitHub {
     owner = "wwmm";
     repo = "pulseeffects";
     rev = "v${version}";
-    sha256 = "15w1kc1b0i8wrkrbfzrvcscanxvcsz336bfyi1awb1lbclvd3sf4";
+    sha256 = "09crsg73mvqdknvh6lczwx16x73zb2vb3m53bsapqiaq4lmwy3qr";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/applications/audio/qmmp/default.nix b/pkgs/applications/audio/qmmp/default.nix
index ef52c65b105..aee373329ce 100644
--- a/pkgs/applications/audio/qmmp/default.nix
+++ b/pkgs/applications/audio/qmmp/default.nix
@@ -29,11 +29,11 @@
 # handle that.
 
 mkDerivation rec {
-  name = "qmmp-1.3.3";
+  name = "qmmp-1.3.4";
 
   src = fetchurl {
     url = "http://qmmp.ylsoftware.com/files/${name}.tar.bz2";
-    sha256 = "1777kqgvbkshqlawy00gbgwflxflwmjjidqdq29mhqszs76r6727";
+    sha256 = "0j9vgm6216w7arwl919p9rps0a9r6s4415spl3qkpifhwlk90zg0";
   };
 
   nativeBuildInputs = [ cmake pkgconfig ];
diff --git a/pkgs/applications/blockchains/ledger-live-desktop/default.nix b/pkgs/applications/blockchains/ledger-live-desktop/default.nix
index 0417d2913de..88b35dd78a6 100644
--- a/pkgs/applications/blockchains/ledger-live-desktop/default.nix
+++ b/pkgs/applications/blockchains/ledger-live-desktop/default.nix
@@ -1,50 +1,34 @@
-{ stdenv, fetchurl, makeDesktopItem, makeWrapper, appimage-run }:
+{ stdenv, fetchurl, makeDesktopItem, appimageTools }:
 
-stdenv.mkDerivation rec {
+let
   pname = "ledger-live-desktop";
-  version = "1.12.0";
+  version = "1.15.0";
+  name = "${pname}-${version}";
 
   src = fetchurl {
     url = "https://github.com/LedgerHQ/${pname}/releases/download/v${version}/${pname}-${version}-linux-x86_64.AppImage";
-    sha256 = "0sn0ri8kqvy36d6vjwsb0mh54nwic58416m6q5drl1schsn6wyvj";
+    sha256 = "0r7gm7q7gj39v36jd5xz20931za94nf2fpf3clbghkhlbrm0kbnq";
   };
 
-  nativeBuildInputs = [ makeWrapper ];
-  buildInputs = [ appimage-run ];
-
-  desktopIcon = fetchurl {
-    url = "https://raw.githubusercontent.com/LedgerHQ/${pname}/v${version}/build/icon.png";
-    sha256 = "1mmfaf0yk7xf1kgbs3ka8wsbz1qgh60xj6z91ica1i7lw2qbdd5h";
-  };
-
-  desktopItem = makeDesktopItem {
-    name = pname;
-    exec = "${placeholder "out"}/bin/${pname}";
-    icon = pname;
-    desktopName = "Ledger Live";
-    categories = "Utility;";
+  appimageContents = appimageTools.extractType2 {
+    inherit name src;
   };
-
-  unpackPhase = ":";
-
-  installPhase = ''
-    runHook preInstall
-
-    ${desktopItem.buildCommand}
-    install -D $src $out/share/${src.name}
-    install -Dm -x ${desktopIcon} \
-      $out/share/icons/hicolor/1024x1024/apps/${pname}.png
-    makeWrapper ${appimage-run}/bin/appimage-run $out/bin/${pname} \
-      --add-flags $out/share/${src.name}
-
-    runHook postInstall
+in appimageTools.wrapType2 rec {
+  inherit name src;
+
+  extraInstallCommands = ''
+    mv $out/bin/${name} $out/bin/${pname}
+    install -m 444 -D ${appimageContents}/ledger-live-desktop.desktop $out/share/applications/ledger-live-desktop.desktop
+    install -m 444 -D ${appimageContents}/ledger-live-desktop.png $out/share/icons/hicolor/1024x1024/apps/ledger-live-desktop.png
+    substituteInPlace $out/share/applications/ledger-live-desktop.desktop \
+      --replace 'Exec=AppRun' 'Exec=${pname}'
   '';
 
   meta = with stdenv.lib; {
     description = "Wallet app for Ledger Nano S and Ledger Blue";
     homepage = "https://www.ledger.com/live";
     license = licenses.mit;
-    maintainers = with maintainers; [ thedavidmeister ];
+    maintainers = with maintainers; [ thedavidmeister nyanloutre ];
     platforms = [ "x86_64-linux" ];
   };
 }
diff --git a/pkgs/applications/blockchains/parity/beta.nix b/pkgs/applications/blockchains/parity/beta.nix
index a6d4660dff1..a26a1b7cc77 100644
--- a/pkgs/applications/blockchains/parity/beta.nix
+++ b/pkgs/applications/blockchains/parity/beta.nix
@@ -1,6 +1,6 @@
 let
-  version     = "2.6.2";
-  sha256      = "1j4249m5k3bi7di0wq6fm64zv3nlpgmg4hr5hnn94fyc09nz9n1r";
-  cargoSha256 = "1wr0i54zc3l6n0x6cvlq9zfy3bw9w5fcvdz4vmyym9r1nkvk31s7";
+  version     = "2.6.4";
+  sha256      = "11l93w97961zig4gqf345j9l20g0mjp7fayl1mdwdp14hhd5zk5g";
+  cargoSha256 = "1q6cbms7j1h726bvq38npxkjkmz14b5ir9c4z7pb0jcy7gkplyxx";
 in
   import ./parity.nix { inherit version sha256 cargoSha256; }
diff --git a/pkgs/applications/blockchains/parity/default.nix b/pkgs/applications/blockchains/parity/default.nix
index 88d24a87e13..299bb0639b6 100644
--- a/pkgs/applications/blockchains/parity/default.nix
+++ b/pkgs/applications/blockchains/parity/default.nix
@@ -1,6 +1,6 @@
 let
-  version     = "2.5.7";
-  sha256      = "0aprs71cbf98dsvjz0kydngkvdg5x7dijji8j6xadgvsarl1ljnj";
-  cargoSha256 = "11mr5q5aynli9xm4wnxcypl3ij7f4b0p7l557yi9n0cvdraw8ki4";
+  version     = "2.5.9";
+  sha256      = "06gmfw5l8n5i35dimsmj6dn0fxhbp53zjrdvbkff63r5kfqnwnx2";
+  cargoSha256 = "1kdy0bnmyqx4rhpq0a8gliy6mws68n035kfkxrfa6cxr2cn53dyb";
 in
   import ./parity.nix { inherit version sha256 cargoSha256; }
diff --git a/pkgs/applications/editors/jetbrains/default.nix b/pkgs/applications/editors/jetbrains/default.nix
index ebdfb09936a..16d5609934d 100644
--- a/pkgs/applications/editors/jetbrains/default.nix
+++ b/pkgs/applications/editors/jetbrains/default.nix
@@ -240,7 +240,7 @@ let
       patchPhase = (attrs.patchPhase or "") + optionalString (stdenv.isLinux) ''
         # Webstorm tries to use bundled jre if available.
         # Lets prevent this for the moment
-        rm -r jre64
+        rm -r jbr
       '';
     });
 in
@@ -250,12 +250,12 @@ in
 
   clion = buildClion rec {
     name = "clion-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description  = "C/C++ IDE. New. Intelligent. Cross-platform";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/cpp/CLion-${version}.tar.gz";
-      sha256 = "13y2c3vzlklwz9cd7anpfdc3dqwh714xivm1g59s6p4x9sy172lp"; /* updated by script */
+      sha256 = "0kiqbcx64rlz1pajbn326zwy0d1vxdxpvk5xpqkcj7nva611pdq1"; /* updated by script */
     };
     wmClass = "jetbrains-clion";
     update-channel = "CLion RELEASE"; # channel's id as in http://www.jetbrains.com/updates/updates.xml
@@ -263,12 +263,12 @@ in
 
   datagrip = buildDataGrip rec {
     name = "datagrip-${version}";
-    version = "2019.2.2"; /* updated by script */
+    version = "2019.2.5"; /* updated by script */
     description = "Your Swiss Army Knife for Databases and SQL";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/datagrip/${name}.tar.gz";
-      sha256 = "1babydzmgaas1rxjv11yhgbp0l5scsdwy17l9927qwlbgccf24mb"; /* updated by script */
+      sha256 = "18frmlchalpvc55j25ig2slf2h33gwmbmm8dvc29jb3kgsl0ny7p"; /* updated by script */
     };
     wmClass = "jetbrains-datagrip";
     update-channel = "DataGrip RELEASE";
@@ -276,12 +276,12 @@ in
 
   goland = buildGoland rec {
     name = "goland-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.2"; /* updated by script */
     description = "Up and Coming Go IDE";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/go/${name}.tar.gz";
-      sha256 = "16wmsf6c8x95d050grqgv6aaxlkc6pqhbqzlz6fzsngjnbkn64yj"; /* updated by script */
+      sha256 = "1wq1prgfn6wc7lc6qjhiykm62c56yrb5rv0hyylcsgdw0q3ns6z2"; /* updated by script */
     };
     wmClass = "jetbrains-goland";
     update-channel = "GoLand RELEASE";
@@ -289,12 +289,12 @@ in
 
   idea-community = buildIdea rec {
     name = "idea-community-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, community edition";
     license = stdenv.lib.licenses.asl20;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIC-${version}.tar.gz";
-      sha256 = "1pbqnyqly09m7lw6356dydbvppq4i94rsk7c3y40mrc285qzj413"; /* updated by script */
+      sha256 = "0gy42x49yhdnp4ks6445xbc24dxw2vxnl12hdyx03mszdv0r58ni"; /* updated by script */
     };
     wmClass = "jetbrains-idea-ce";
     update-channel = "IntelliJ IDEA RELEASE";
@@ -302,12 +302,12 @@ in
 
   idea-ultimate = buildIdea rec {
     name = "idea-ultimate-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "Integrated Development Environment (IDE) by Jetbrains, requires paid license";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/idea/ideaIU-${version}-no-jbr.tar.gz";
-      sha256 = "0mslmhakjjgwj76hbfw9dcidic6zprjfjryggic7dqywl7vjwc95"; /* updated by script */
+      sha256 = "0allnibq8van3n1c5y85gscbpls0wshwffa6b2l2andw1jkhc259"; /* updated by script */
     };
     wmClass = "jetbrains-idea";
     update-channel = "IntelliJ IDEA RELEASE";
@@ -315,12 +315,12 @@ in
 
   phpstorm = buildPhpStorm rec {
     name = "phpstorm-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "Professional IDE for Web and PHP developers";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/webide/PhpStorm-${version}.tar.gz";
-      sha256 = "1m198p6586dych6mrgwqxs486qndypsmnikl0rxx45ddrwfjl42g"; /* updated by script */
+      sha256 = "0pra0hmyczxcxnvsc7rqiwhwj23ckx97c9m1wcyn7ik612xwik1i"; /* updated by script */
     };
     wmClass = "jetbrains-phpstorm";
     update-channel = "PhpStorm RELEASE";
@@ -328,12 +328,12 @@ in
 
   pycharm-community = buildPycharm rec {
     name = "pycharm-community-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "PyCharm Community Edition";
     license = stdenv.lib.licenses.asl20;
     src = fetchurl {
       url = "https://download.jetbrains.com/python/${name}.tar.gz";
-      sha256 = "0a3fi2wjj0166199pyhvvpaih9nx0xr6q7zf7jfj8i7khpkdk8i5"; /* updated by script */
+      sha256 = "02fynwi54libibgigwggh6xaf5p4046n0kjsqsck1kjbnrlghp10"; /* updated by script */
     };
     wmClass = "jetbrains-pycharm-ce";
     update-channel = "PyCharm RELEASE";
@@ -341,12 +341,12 @@ in
 
   pycharm-professional = buildPycharm rec {
     name = "pycharm-professional-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "PyCharm Professional Edition";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/python/${name}.tar.gz";
-      sha256 = "03i7qi0kcnx0irih468xaz7hzicaa5yh399r676drs22ak23qwrq"; /* updated by script */
+      sha256 = "19i3ll8p69n7jw7psv2nkhjq899gljwmc5ixpqhyl203rykavb7n"; /* updated by script */
     };
     wmClass = "jetbrains-pycharm";
     update-channel = "PyCharm RELEASE";
@@ -354,12 +354,12 @@ in
 
   rider = buildRider rec {
     name = "rider-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.2"; /* updated by script */
     description = "A cross-platform .NET IDE based on the IntelliJ platform and ReSharper";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/rider/JetBrains.Rider-${version}.tar.gz";
-      sha256 = "1p0mlch7qvkvgxjscx6rl65v6h8g6fwk8rcb8s27qkcjm0d78ic8"; /* updated by script */
+      sha256 = "1wv5vhiv3w1dwyklx1pr5javp4psqyiv4naq37cvxxp9zh7hk8rc"; /* updated by script */
     };
     wmClass = "jetbrains-rider";
     update-channel = "Rider RELEASE";
@@ -367,12 +367,12 @@ in
 
   ruby-mine = buildRubyMine rec {
     name = "ruby-mine-${version}";
-    version = "2019.2.1"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "The Most Intelligent Ruby and Rails IDE";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/ruby/RubyMine-${version}.tar.gz";
-      sha256 = "0l0kwc1mih55px8j6bvp1g3pxrv0scd9vpydwvkaqmq5x0r1n3jf"; /* updated by script */
+      sha256 = "0g8yxsq9xn8l8wnmcm0y5y0ll5081s83mmwrb62k4bldlsr25iba"; /* updated by script */
     };
     wmClass = "jetbrains-rubymine";
     update-channel = "RubyMine RELEASE";
@@ -380,12 +380,12 @@ in
 
   webstorm = buildWebStorm rec {
     name = "webstorm-${version}";
-    version = "2019.1.3"; /* updated by script */
+    version = "2019.2.3"; /* updated by script */
     description = "Professional IDE for Web and JavaScript development";
     license = stdenv.lib.licenses.unfree;
     src = fetchurl {
       url = "https://download.jetbrains.com/webstorm/WebStorm-${version}.tar.gz";
-      sha256 = "1bhx2p40r15zvfr6q10bj5y8jaa3i9x9adchczp0irkd3w2jgvy3"; /* updated by script */
+      sha256 = "0l3c3b1d53b3w90d4g99pjw8vmjj716jjaxsv4hy53shh1ncd55g"; /* updated by script */
     };
     wmClass = "jetbrains-webstorm";
     update-channel = "WebStorm RELEASE";
diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix
index 9b146aa5036..70a716a760c 100644
--- a/pkgs/applications/kde/default.nix
+++ b/pkgs/applications/kde/default.nix
@@ -172,6 +172,7 @@ let
       pim-data-exporter = callPackage ./pim-data-exporter.nix {};
       pim-sieve-editor = callPackage ./pim-sieve-editor.nix {};
       print-manager = callPackage ./print-manager.nix {};
+      rocs = callPackage ./rocs.nix {};
       spectacle = callPackage ./spectacle.nix {};
       yakuake = callPackage ./yakuake.nix {};
       # Okteta was removed from kde applications and will now be released independently
diff --git a/pkgs/applications/kde/pim-data-exporter.nix b/pkgs/applications/kde/pim-data-exporter.nix
index d17ffb3c044..9f2117b41fb 100644
--- a/pkgs/applications/kde/pim-data-exporter.nix
+++ b/pkgs/applications/kde/pim-data-exporter.nix
@@ -1,10 +1,10 @@
 {
   mkDerivation, lib, kdepimTeam,
   extra-cmake-modules, kdoctools,
-  akonadi, kcmutils, kcrash, kdbusaddons, kidentitymanagement, kldap,
-  kmailtransport, knewstuff, knotifications, knotifyconfig, kparts, kross, ktexteditor,
-  kwallet, libkdepim, libkleo, pimcommon, qttools,
-  karchive, mailcommon, messagelib
+  akonadi, akonadi-notes, kcalcore, kcmutils, kcrash, kdbusaddons,
+  kidentitymanagement, kldap, kmailtransport, knewstuff, knotifications,
+  knotifyconfig, kparts, kross, ktexteditor, kwallet, libkdepim, libkleo,
+  pimcommon, qttools, karchive, mailcommon, messagelib
 }:
 
 mkDerivation {
@@ -15,8 +15,9 @@ mkDerivation {
   };
   nativeBuildInputs = [ extra-cmake-modules kdoctools ];
   buildInputs = [
-    akonadi kcmutils kcrash kdbusaddons kidentitymanagement kldap kmailtransport
-    knewstuff knotifications knotifyconfig kparts kross ktexteditor kwallet libkdepim
-    libkleo pimcommon qttools karchive mailcommon messagelib
+    akonadi akonadi-notes kcalcore kcmutils kcrash kdbusaddons
+    kidentitymanagement kldap kmailtransport knewstuff knotifications
+    knotifyconfig kparts kross ktexteditor kwallet libkdepim libkleo pimcommon
+    qttools karchive mailcommon messagelib
   ];
 }
diff --git a/pkgs/applications/kde/rocs.nix b/pkgs/applications/kde/rocs.nix
new file mode 100644
index 00000000000..feae7ca81de
--- /dev/null
+++ b/pkgs/applications/kde/rocs.nix
@@ -0,0 +1,25 @@
+{
+  mkDerivation, lib,
+  extra-cmake-modules, boost,
+  qtbase, qtscript, qtquickcontrols, qtwebkit, qtxmlpatterns, grantlee,
+  kdoctools, karchive, kxmlgui, kcrash, kdeclarative, ktexteditor, kguiaddons
+}:
+
+mkDerivation {
+  name = "rocs";
+
+  meta = with lib; {
+    homepage = "https://edu.kde.org/rocs/";
+    description = "A graph theory IDE.";
+    license = with licenses; [ gpl2 lgpl21 fdl12 ];
+    platforms = lib.platforms.linux;
+    maintainers = with maintainers; [ knairda ];
+  };
+
+  nativeBuildInputs = [ extra-cmake-modules kdoctools ];
+  buildInputs = [
+    boost
+    qtbase qtscript qtquickcontrols qtwebkit qtxmlpatterns grantlee
+    kxmlgui kcrash kdeclarative karchive ktexteditor kguiaddons
+  ];
+}
diff --git a/pkgs/applications/misc/1password/default.nix b/pkgs/applications/misc/1password/default.nix
index edcd08f2499..5895990e80e 100644
--- a/pkgs/applications/misc/1password/default.nix
+++ b/pkgs/applications/misc/1password/default.nix
@@ -2,24 +2,24 @@
 
 stdenv.mkDerivation rec {
   pname = "1password";
-  version = "0.6.1";
+  version = "0.6.2";
   src =
     if stdenv.hostPlatform.system == "i686-linux" then
       fetchzip {
         url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_linux_386_v${version}.zip";
-        sha256 = "1yr78yawscp9fgvdw0dimc68k3bblk3g67g3jrqpa7hnl6pr24yl";
+        sha256 = "08ha4qr064jyivsp8z3q2cwmmm6klqyicc1i9vpf7zd9xmmx72rd";
         stripRoot = false;
       }
     else if stdenv.hostPlatform.system == "x86_64-linux" then
       fetchzip {
         url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_linux_amd64_v${version}.zip";
-        sha256 = "03m0vxhghzf4zq7k2f1afkc5ixf0qwiiypqjfjgpqpfng7g9ang7";
+        sha256 = "1fjhn1k9h6rlrgin5czvpig8h70dh14i5k20g77jvxq24bf0sn9m";
         stripRoot = false;
       }
     else if stdenv.hostPlatform.system == "x86_64-darwin" then
       fetchzip {
         url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_darwin_amd64_v${version}.zip";
-        sha256 = "1hypmls1fq4rjx9icgr0pkx3s3fhhma2q5rds314sv7f9ijl458f";
+        sha256 = "1x7pj41a4wra3ws09cyc063ai5isf12qbkm2hxiiiq5glnacpvpl";
         stripRoot = false;
       }
     else throw "Architecture not supported";
@@ -37,7 +37,7 @@ stdenv.mkDerivation rec {
     description  = "1Password command-line tool";
     homepage     = https://support.1password.com/command-line/;
     downloadPage = https://app-updates.agilebits.com/product_history/CLI;
-    maintainers  = with maintainers; [ joelburget ];
+    maintainers  = with maintainers; [ joelburget marsam ];
     license      = licenses.unfree;
     platforms    = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ];
   };
diff --git a/pkgs/applications/misc/kitty/default.nix b/pkgs/applications/misc/kitty/default.nix
index 1991cf1fa4a..db8ef004383 100644
--- a/pkgs/applications/misc/kitty/default.nix
+++ b/pkgs/applications/misc/kitty/default.nix
@@ -21,14 +21,14 @@
 with python3Packages;
 buildPythonApplication rec {
   pname = "kitty";
-  version = "0.14.5";
+  version = "0.14.6";
   format = "other";
 
   src = fetchFromGitHub {
     owner = "kovidgoyal";
     repo = "kitty";
     rev = "v${version}";
-    sha256 = "0qx3wj4n3zgjcpd1vjjwdlz8d1vp8bkxihsg2khlla1izandgxxa";
+    sha256 = "1rb5ys9xsdhd2qa3kz5gqzz111c6b14za98va6hlglk69wqlmb51";
   };
 
   buildInputs = [
@@ -89,7 +89,7 @@ buildPythonApplication rec {
     mkdir -p $out
     ${if stdenv.isDarwin then ''
     mkdir "$out/bin"
-    ln -s ../Applications/kitty.app/Contents/MacOS/kitty-deref-symlink "$out/bin/kitty"
+    ln -s ../Applications/kitty.app/Contents/MacOS/kitty "$out/bin/kitty"
     mkdir "$out/Applications"
     cp -r kitty.app "$out/Applications/kitty.app"
     '' else ''
@@ -123,6 +123,6 @@ buildPythonApplication rec {
     description = "A modern, hackable, featureful, OpenGL based terminal emulator";
     license = licenses.gpl3;
     platforms = platforms.darwin ++ platforms.linux;
-    maintainers = with maintainers; [ tex rvolosatovs ];
+    maintainers = with maintainers; [ tex rvolosatovs ma27 ];
   };
 }
diff --git a/pkgs/applications/misc/osmium-tool/default.nix b/pkgs/applications/misc/osmium-tool/default.nix
index 616949af883..19657da607f 100644
--- a/pkgs/applications/misc/osmium-tool/default.nix
+++ b/pkgs/applications/misc/osmium-tool/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "osmium-tool";
-  version = "1.10.0";
+  version = "1.11.0";
 
   src = fetchFromGitHub {
     owner = "osmcode";
     repo = "osmium-tool";
     rev = "v${version}";
-    sha256 = "1balhz78nva0agmbp8n9vg8fhmdssnd9fjxj20bpw7b45mxhjc20";
+    sha256 = "164r1w539dzy67ir2rqh21kwdvkjv87isd18gp51qyxbsprz6kq5";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/applications/misc/pwsafe/default.nix b/pkgs/applications/misc/pwsafe/default.nix
index 1ed54b05ec8..b1f4e5f9e42 100644
--- a/pkgs/applications/misc/pwsafe/default.nix
+++ b/pkgs/applications/misc/pwsafe/default.nix
@@ -6,13 +6,13 @@
 
 stdenv.mkDerivation rec {
   pname = "pwsafe";
-  version = "1.08.1";
+  version = "1.08.2";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
     rev = "${version}BETA";
-    sha256 = "0x89pn056h8b4yvxbd6l3qwrghslxc7vlxnblmcmsx7xx4i041ng";
+    sha256 = "14qwk3cv5psj7ll71ikyv452x55c7iwjw9765yrpij6741r4yjln";
   };
 
   nativeBuildInputs = [ 
diff --git a/pkgs/applications/misc/sequeler/default.nix b/pkgs/applications/misc/sequeler/default.nix
index e3edb539928..78c9fed17fe 100644
--- a/pkgs/applications/misc/sequeler/default.nix
+++ b/pkgs/applications/misc/sequeler/default.nix
@@ -11,13 +11,13 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "sequeler";
-  version = "0.7.2";
+  version = "0.7.3";
 
   src = fetchFromGitHub {
     owner = "Alecaddd";
     repo = pname;
     rev = "v${version}";
-    sha256 = "0mxlhyfqmd4zg0psdmr62rhmvssw8jslm7a1nvh93675ns3vfrs5";
+    sha256 = "16vc3v9qls9fxg9h8fsi67z68s4acl5hj14gbcrnqm7mf3kmk3aw";
   };
 
   nativeBuildInputs = [ meson ninja pkgconfig pantheon.vala gettext wrapGAppsHook python3 desktop-file-utils ];
diff --git a/pkgs/applications/misc/syncthingtray/default.nix b/pkgs/applications/misc/syncthingtray/default.nix
index 0dc8f3bf38e..70aa684da04 100644
--- a/pkgs/applications/misc/syncthingtray/default.nix
+++ b/pkgs/applications/misc/syncthingtray/default.nix
@@ -20,14 +20,14 @@
 }:
 
 mkDerivation rec {
-  version = "0.9.1";
+  version = "0.10.0";
   pname = "syncthingtray";
 
   src = fetchFromGitHub {
     owner = "Martchus";
     repo = "syncthingtray";
     rev = "v${version}";
-    sha256 = "0ijwpwlwwbfh9fdfbwz6dgi6hpmaav2jm56mzxm6as50iwnb59fx";
+    sha256 = "18h6z6baaiyr0wr7kyz6ysg45zb12550m63j3vqiap4hfrrwhly5";
   };
 
   buildInputs = [ qtbase cpp-utilities qtutilities ]
diff --git a/pkgs/applications/networking/browsers/eolie/default.nix b/pkgs/applications/networking/browsers/eolie/default.nix
index e067f3f15eb..b9b183a03ff 100644
--- a/pkgs/applications/networking/browsers/eolie/default.nix
+++ b/pkgs/applications/networking/browsers/eolie/default.nix
@@ -5,7 +5,7 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "eolie";
-  version = "0.9.60";
+  version = "0.9.63";
 
   format = "other";
   doCheck = false;
@@ -14,7 +14,7 @@ python3.pkgs.buildPythonApplication rec {
     url = "https://gitlab.gnome.org/World/eolie";
     rev = "refs/tags/${version}";
     fetchSubmodules = true;
-    sha256 = "1mhl7p8pwp8lqx5z15r0lx1y4mb2c1gjwy3w6041cyc4hyb91693";
+    sha256 = "0z8gcfg7i842rr5p8r3vqa31kf7nnj1yv3afax3jzf4zbnhb8wm0";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix b/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
index 3f6b23d70a0..111f4e728e7 100644
--- a/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
+++ b/pkgs/applications/networking/instant-messengers/pybitmessage/default.nix
@@ -12,14 +12,15 @@ python2Packages.buildPythonApplication rec {
     sha256 = "1lmhbpwsqh1v93krlqqhafw2pc3y0qp8zby186yllbph6s8kdp35";
   };
 
-  propagatedBuildInputs = with python2Packages; [ msgpack-python pyqt4 numpy pyopencl ] ++ [ openssl ];
+  propagatedBuildInputs = with python2Packages; [ msgpack pyqt4 numpy pyopencl setuptools ] ++ [ openssl ];
 
   preConfigure = ''
     # Remove interaction and misleading output
     substituteInPlace setup.py \
       --replace "nothing = raw_input()" pass \
       --replace 'print "It looks like building the package failed.\n" \' pass \
-      --replace '    "You may be missing a C++ compiler and the OpenSSL headers."' pass
+      --replace '    "You may be missing a C++ compiler and the OpenSSL headers."' pass \
+      --replace 'msgpack-python' 'msgpack'
 
     substituteInPlace src/pyelliptic/openssl.py \
       --replace "libdir.append(find_library('ssl'))" "libdir.append('${openssl.out}/lib/libssl.so')"
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
index b9017c12d60..cfc38fb4ae7 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
@@ -2,7 +2,7 @@
   "name": "riot-web",
   "productName": "Riot",
   "main": "src/electron-main.js",
-  "version": "1.3.5",
+  "version": "1.4.0",
   "description": "A feature-rich client for Matrix.org",
   "author": "New Vector Ltd.",
   "dependencies": {
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
index 1fde990e4a8..885e90a98c4 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
@@ -6,12 +6,12 @@
 
 let
   executableName = "riot-desktop";
-  version = "1.3.5";
+  version = "1.4.0";
   riot-web-src = fetchFromGitHub {
     owner = "vector-im";
     repo = "riot-web";
     rev = "v${version}";
-    sha256 = "05xwp6062lvjsy539swa6dxj3k3dw1667nkx8ffwdl1dg17wphy8";
+    sha256 = "1p8bl7v2214shywn53fpcb27vvvdjrs3kcys3f045v2l5fg5xhsa";
   };
 
 in yarn2nix-moretea.mkYarnPackage rec {
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
index b938f4f47cf..d0ee71b9969 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
@@ -5,11 +5,11 @@
 
 stdenv.mkDerivation rec {
   pname = "riot-web";
-  version = "1.3.5";
+  version = "1.4.0";
 
   src = fetchurl {
     url = "https://github.com/vector-im/riot-web/releases/download/v${version}/riot-v${version}.tar.gz";
-    sha256 = "0vpfv5rvrhrws52j4lxnj1qyagf9894znpxkdnkp72g19qsjn66g";
+    sha256 = "1si11hxkfn6sqaq1hddm5vkfrd0pghzwqld1wv4vxlb5jyn32qqk";
   };
 
   installPhase = let
diff --git a/pkgs/applications/networking/instant-messengers/teamspeak/client.nix b/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
index eaf9a8f47e5..a75d0c8633a 100644
--- a/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
+++ b/pkgs/applications/networking/instant-messengers/teamspeak/client.nix
@@ -33,13 +33,13 @@ in
 stdenv.mkDerivation rec {
   pname = "teamspeak-client";
 
-  version = "3.3.0";
+  version = "3.3.2";
 
   src = fetchurl {
     url = "https://files.teamspeak-services.com/releases/client/${version}/TeamSpeak3-Client-linux_${arch}-${version}.run";
     sha256 = if stdenv.is64bit
-                then "13286dbjp4qiyfv8my1hfpwzns4szdsnqa11j8ygsh5ikgjk338a"
-                else "04lwclq7nvw73v5fmn9795j5wi54syglc77ldl41caiqqhdqf1i5";
+                then "1n916ds67dxj5bfgc5zm9nz2xh2914k85pzzspzvfyr7njcw7hpi"
+                else "0csl5xklcb4v8bzwvby5m2n38zjrnaw8dcvha7qvfbjllxr75yn2";
   };
 
   # grab the plugin sdk for the desktop icon
diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
index 2de09fc73f4..6dfb6780f0d 100644
--- a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
+++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
@@ -1,615 +1,615 @@
 {
-  version = "68.1.0";
+  version = "68.1.1";
   sources = [
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/ar/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/ar/thunderbird-68.1.1.tar.bz2";
       locale = "ar";
       arch = "linux-x86_64";
-      sha512 = "b9bb22bdbe013358c03e804e3c51ad387dca503b9e0074db70494eb3f331d72bd8679db929972e75b39f2464d384753bcab9947d1a843a69167d7b3706952c35";
+      sha512 = "33accd6fe1f83fc47a34df038f4257571f42281a89f9aab2f54514443856b71aaa2ee81abe98331ecdbbf026a09eea31fb2c5eb72044347c54f51a6ac1e0bfd4";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/ast/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/ast/thunderbird-68.1.1.tar.bz2";
       locale = "ast";
       arch = "linux-x86_64";
-      sha512 = "e00382241343bbd8a86e31dfcf5bbb060b46e5db6211cfa54c7192361353e2c4fe3d0ad3f4e0319ec1a0dc1f4590b7bc0271e5658bc468986d8e27a64d9924da";
+      sha512 = "1e32c40cd198b51a5836c2ad9a6331c0b3028e57d62e5e057990a48ab80b9fd5bd1290a268da29dc5a45c61e712bf0345f85d0ca43c18b2236c0f4bac7b9328f";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/be/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/be/thunderbird-68.1.1.tar.bz2";
       locale = "be";
       arch = "linux-x86_64";
-      sha512 = "f043c8aa5dac0d5e2f9da628d6659f654cc39726677424e4b5e5005e97bf202575f569ebdee346d37cc8d4d59da188e6cfe1bd6bf7df1acafe26b489242b4a9f";
+      sha512 = "0f86506a7cf72c75712f6b507fda6e39da9520865dea5eb4fbfdb78531dc88116d4e8227dd91e8f1fb4dff9ed3e4eb7e118b5a4dde3860ec00c3bca625478a21";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/bg/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/bg/thunderbird-68.1.1.tar.bz2";
       locale = "bg";
       arch = "linux-x86_64";
-      sha512 = "61fcf864145fb4fd4a05bff47bd23a7be8444f9d067eec246399c3a7ce48db8744ba4a9cb42e28a215a5bb1b336a57c51d1a32e6564f42c8b9fd4dba5f629d9f";
+      sha512 = "f25c07ee41767fc1ec9381291662ce5bf269971f3542b4c2427da7240c13cfe44f006b8995e6474309bb6330e21626ca7e3e7463452ddd5d7e0128b799f6f566";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/br/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/br/thunderbird-68.1.1.tar.bz2";
       locale = "br";
       arch = "linux-x86_64";
-      sha512 = "1cdc9b2a8ee82bb087a51ac013644ff3da5f1e161fca23fb24feae8076cef6c5aff5316f83a8ecfa4f08c3a8642501a333d3ef95b46b8f899ce78b79d027af4c";
+      sha512 = "c57c207922aa0f1534fd6925305effdea2f09ee83ddfe7eed62d30b91494ddbf6ade0c0cba2e7332c876e10e15593ad985deaec769525fd3a19b21d048383690";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/ca/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/ca/thunderbird-68.1.1.tar.bz2";
       locale = "ca";
       arch = "linux-x86_64";
-      sha512 = "1b73ca87f3067ec2a84990c7c58060b11286dd653f4b8b4c18a44f5540ea195d25f995539de39b6e1de6cbbe54c890bf30f6d88157e000e30c69f4d32a4ae8f0";
+      sha512 = "4fb66d8e9285cb40cf42f626d38eecabe489fa5311a25ce2e687483b6624819674b0b4a41f486a0ea98edbe27cea2f7f156368516f70afd4f78629aef93cb94f";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/cak/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/cak/thunderbird-68.1.1.tar.bz2";
       locale = "cak";
       arch = "linux-x86_64";
-      sha512 = "1b2ec85786a842c7554f52b1ff72c4e5611a76bca94c4b8e9a79604d6b85d7f2deba906bbeca355dfd0c5a6c241d9bd397f4e0dfebd802cdb0c35162a02fd879";
+      sha512 = "2c591767d09c3af59dcda7c44937f012cc14695a7744bca49d2b5788cd44953a85b8cc0005efa4db3daeb6c5f553ead9d15239af37b1c7686e5331cf9bb09ee5";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/cs/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/cs/thunderbird-68.1.1.tar.bz2";
       locale = "cs";
       arch = "linux-x86_64";
-      sha512 = "69df6542c5037815d3a80be764eaa809dd351f75417e4362a258df5e17e36aef6d8f8653429f4218f196ff096252e0304c2cca1cccbf8693d119bc05f1072067";
+      sha512 = "62d58fd817b235d8afea65212f527b99cf67d882a3fef592c2499881d659837ed90f5192111edef9b7d00e37ea5b1becc9fed00eb4af063ffa4ece160996a73b";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/cy/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/cy/thunderbird-68.1.1.tar.bz2";
       locale = "cy";
       arch = "linux-x86_64";
-      sha512 = "5dc63d2746475f0045f7749e45bbc3f755b187521b0ca877ffab9386bb1bbe9b4fd66f9cc6bdac516ba591e71d71f02a75b5c965a610a3efbee3b59815d8deda";
+      sha512 = "7df64966340aed43c1411abeef18ade4891c2d64361d3952967529ea487dbccf6ec4d824f85a740ed4d54bda188acf9992ba9623a72c139268f09efaaa27eb89";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/da/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/da/thunderbird-68.1.1.tar.bz2";
       locale = "da";
       arch = "linux-x86_64";
-      sha512 = "89427a2b66dbd71cdfbb299a14ce7ed61ab4836e473854ea8b2ec522de64870f8886f6ae86428c9b1c86733aaa4ac7c732a708fccdd70d3e112d2f651c0dc762";
+      sha512 = "7bc7c0b44e981f74119cb19f4d27e260a2df53b9188364c367752ca4fa461b1c003ea58d4eb14fd9d9b64ab1cec5cbef6e68080da180ca6e904bc6bed0dea924";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-x86_64/de/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-x86_64/de/thunderbird-68.1.1.tar.bz2";
       locale = "de";
       arch = "linux-x86_64";
-      sha512 = "34130ec994f6ee6a407313ccc61d43b0375046f59f75d4fb619776d5c880993802c16a3b8ec28dc7053b4ae89f91f1c2046da7d884d150aa7c3b65edd1650b21";
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       arch = "linux-i686";
-      sha512 = "80335f326bde31f4b1e269cd756b4b41ff3a632023f09447abf6d1964381f8f9657a4f47ed6af63a3eb0cd4e84e5bced595eec07cc0a9e30ad8d3cf3d08026df";
+      sha512 = "d6717aee4e1367ba031d03a90fc46ef397f9bbe6ef1d2a5537df77dca1d042e83c6fb44baef9ab01dc47de0f481742186220542831bfb6670c7a756a77eddfad";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-i686/uz/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-i686/uz/thunderbird-68.1.1.tar.bz2";
       locale = "uz";
       arch = "linux-i686";
-      sha512 = "2434a8a063b0d1019220579bc83160217d5c269b24ad83a9ed0969425a1fc9d9ed8b190c291d87c34379928aa6c2329d3b5ad287b44177dd61f680081cd7caf9";
+      sha512 = "58ba68d642eeb1700c6d0994260bb16028fd15b49697c6e99e61e73d90275e0e4d2e6957c2af60122ca7be8804c1ddeb15dc38090287335a674104da3cd1cb47";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-i686/vi/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-i686/vi/thunderbird-68.1.1.tar.bz2";
       locale = "vi";
       arch = "linux-i686";
-      sha512 = "0e33f1a2f8cd67bdb523180af0b8afa5fbbb3628b0b9407f2a4ae609c7155b33fd85a1f23d9b74097fefb045fd0b437f58971cc4c4d5f391398d6ea7429b921e";
+      sha512 = "9968cf02fe2b58f21e228b9292b48fcf9df5beb805335e7c77332231690b2bfcea29a4abfe9e834a85c2e4f79fe55df4590a2ec17676712c1b30736f48704bf8";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-i686/zh-CN/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-i686/zh-CN/thunderbird-68.1.1.tar.bz2";
       locale = "zh-CN";
       arch = "linux-i686";
-      sha512 = "27d1d9b3c30ab1dd863362139f91b79ffb7e36e87ff1f7f07162ea3e86a58962136e43cca3212e4263908f63dfe3a3c53bb3db3085e5b4bf07e0ff88408822d8";
+      sha512 = "41369b102e82285050147d0e883fc20c6b7d311a1a8cef2efd31480a6eeee8c3ea5e0a9e9968c3d903d1fd92aeec331ade3cbcedd16cb254a74c6049ec0ab410";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.0/linux-i686/zh-TW/thunderbird-68.1.0.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.1.1/linux-i686/zh-TW/thunderbird-68.1.1.tar.bz2";
       locale = "zh-TW";
       arch = "linux-i686";
-      sha512 = "2141f0ad5d11daf3a94f3a737801ec0234a7f2d869320d4859d771ab92a6e59bf13139b4048a7239640635051a9228e6cbf55746402ed35cb398d93a3d129439";
+      sha512 = "37e07f78c2ab67d040d6cd4a511fb3e6a641ca00dd659b51d5d320e79251bb2096dd6719da819c22306e10af9fc88389212129d20064ce110d06d49bf01545b5";
     }
     ];
 }
diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix
index 1617ccd7dd1..574c4895a64 100644
--- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix
+++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix
@@ -25,11 +25,11 @@ let
   gcc = if stdenv.cc.isGNU then stdenv.cc.cc else stdenv.cc.cc.gcc;
 in stdenv.mkDerivation rec {
   pname = "thunderbird";
-  version = "68.1.0";
+  version = "68.1.1";
 
   src = fetchurl {
     url = "mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz";
-    sha512 = "06036nawpm987q33567nhz55qybbcl55h5rdhjbhck5qmyj1qi383xqac5niwyk7c0gaq4ygwc5a24pysf85crjdway2zmqyjxp2apb";
+    sha512 = "2ng5wwd7fn9247ggzlxx96scc2nalaahzvxkzvb87mp9fbfcsi3v9dh370cm42px8hrknnsp2lrfk9hqx4287zyn9pl3k9vr6a9cswl";
   };
 
   # from firefox, but without sound libraries
diff --git a/pkgs/applications/radio/qradiolink/default.nix b/pkgs/applications/radio/qradiolink/default.nix
index a00ec6c47eb..4a185667944 100644
--- a/pkgs/applications/radio/qradiolink/default.nix
+++ b/pkgs/applications/radio/qradiolink/default.nix
@@ -5,7 +5,7 @@
 } :
 
 let
-  version = "0.5.0";
+  version = "0.5.2";
 
 in stdenv.mkDerivation {
   pname = "qradiolink";
@@ -15,7 +15,7 @@ in stdenv.mkDerivation {
     owner = "kantooon";
     repo = "qradiolink";
     rev = version;
-    sha256 = "0xhg5zhjznmls5m3rhpk1qx0dipxmca12s85w15d0i7qwva2f1gi";
+    sha256 = "0djhrr96b8sr2vi6hwbzgzlp9771622dp93f0rsphsyxlwbzsrgl";
   };
 
   preBuild = ''
diff --git a/pkgs/applications/science/biology/macse/default.nix b/pkgs/applications/science/biology/macse/default.nix
new file mode 100644
index 00000000000..59938addbe8
--- /dev/null
+++ b/pkgs/applications/science/biology/macse/default.nix
@@ -0,0 +1,32 @@
+{ stdenv, fetchurl, jre, makeWrapper }:
+
+stdenv.mkDerivation rec {
+  pname = "macse";
+  version = "2.03";
+
+  src = fetchurl {
+    url = "https://bioweb.supagro.inra.fr/${pname}/releases/${pname}_v${version}.jar";
+    sha256 = "0jnjyz4f255glg37rawzdv4m6nfs7wfwc5dny7afvx4dz2sv4ssh";
+  };
+
+  nativeBuildInputs = [ makeWrapper ];
+
+  dontBuild = true;
+  unpackPhase = ":";
+
+  installPhase = ''
+    runHook preInstall
+    mkdir -p $out/share/java
+    cp -s $src $out/share/java/macse.jar
+    makeWrapper ${jre}/bin/java $out/bin/macse --add-flags "-jar $out/share/java/macse.jar"
+    runHook postInstall
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Multiple alignment of coding sequences";
+    homepage = "https://bioweb.supagro.inra.fr/macse/";
+    license = licenses.gpl2;
+    maintainers = [ maintainers.bzizou ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/applications/science/electronics/verilog/default.nix b/pkgs/applications/science/electronics/verilog/default.nix
index f850a1bf94d..b707db14160 100644
--- a/pkgs/applications/science/electronics/verilog/default.nix
+++ b/pkgs/applications/science/electronics/verilog/default.nix
@@ -35,6 +35,6 @@ stdenv.mkDerivation rec {
     homepage = "http://iverilog.icarus.com/";
     license = licenses.lgpl21;
     maintainers = with maintainers; [ winden ];
-    platforms = platforms.linux;
+    platforms = platforms.all;
   };
 }
diff --git a/pkgs/applications/version-management/git-and-tools/hub/default.nix b/pkgs/applications/version-management/git-and-tools/hub/default.nix
index cd38be2b977..c3d0ddfe4e3 100644
--- a/pkgs/applications/version-management/git-and-tools/hub/default.nix
+++ b/pkgs/applications/version-management/git-and-tools/hub/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   pname = "hub";
-  version = "2.12.4";
+  version = "2.12.7";
 
   goPackagePath = "github.com/github/hub";
 
@@ -13,7 +13,7 @@ buildGoPackage rec {
     owner = "github";
     repo = pname;
     rev = "v${version}";
-    sha256 = "1d4cn4pgx520psrfac92h3m7azxnpj1plrrqmxryar85f3y363bq";
+    sha256 = "028hc2cgjgqmi9kvxhck4nvq02p095bp1d8qxc6q38aynwfmmhk5";
   };
 
   nativeBuildInputs = [ groff utillinux ];
diff --git a/pkgs/applications/video/minitube/default.nix b/pkgs/applications/video/minitube/default.nix
index a9876da234f..f1f757d588f 100644
--- a/pkgs/applications/video/minitube/default.nix
+++ b/pkgs/applications/video/minitube/default.nix
@@ -1,5 +1,5 @@
 { stdenv, fetchFromGitHub, wrapQtAppsHook, phonon, phonon-backend-vlc, qtbase, qmake
-, qtdeclarative, qttools
+, qtdeclarative, qttools, qtx11extras, mpv
 
 # "Free" key generated by nckx <github@tobias.gr>. I no longer have a Google
 # account. You'll need to generate (and please share :-) a new one if it breaks.
@@ -7,16 +7,17 @@
 
 stdenv.mkDerivation rec {
   pname = "minitube";
-  version = "2.9";
+  version = "3.2";
 
   src = fetchFromGitHub {
-    sha256 = "11zkmwqadlgrrghs3rxq0h0fllfnyd3g09d7gdd6vd9r1a1yz73f";
+    sha256 = "0175sgqmszakqd631bni4aqjpx68h6n49zjvg23fb1yyancnkn4c";
     rev = version;
     repo = "minitube";
     owner = "flaviotordini";
+    fetchSubmodules = true;
   };
 
-  buildInputs = [ phonon phonon-backend-vlc qtbase qtdeclarative qttools ];
+  buildInputs = [ phonon phonon-backend-vlc qtbase qtdeclarative qttools qtx11extras mpv ];
   nativeBuildInputs = [ wrapQtAppsHook qmake ];
 
   qmakeFlags = [ "DEFINES+=APP_GOOGLE_API_KEY=${withAPIKey}" ];
diff --git a/pkgs/applications/virtualization/x11docker/default.nix b/pkgs/applications/virtualization/x11docker/default.nix
index ea8a24e57a3..1d18e4d14e8 100644
--- a/pkgs/applications/virtualization/x11docker/default.nix
+++ b/pkgs/applications/virtualization/x11docker/default.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchFromGitHub, makeWrapper, nx-libs, xorg }:
 stdenv.mkDerivation rec {
   pname = "x11docker";
-  version = "6.0.0";
+  version = "6.2.0";
   src = fetchFromGitHub {
     owner = "mviereck";
     repo = "x11docker";
     rev = "v${version}";
-    sha256 = "1sfdxlh50hv8j3dj5bphihqdyf8s7ixm6ckrmvqgr2y3gak1y840";
+    sha256 = "19q5vrhspxpjkdhhlgya2sa2fgjg8gyd3kmnb83nlfs46p8jx4f4";
   };
   nativeBuildInputs = [ makeWrapper ];
   buildInputs = [ nx-libs xorg.xhost xorg.xinit ];