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authorBruno Bzeznik <Bruno.Bzeznik@imag.fr>2019-03-29 08:58:20 +0100
committerBruno Bzeznik <Bruno.Bzeznik@imag.fr>2019-04-05 09:01:36 +0200
commit0b03f44c2f1ee0d692e00e5ffc064ad38af4a447 (patch)
tree9c08311a42418ca3b6c2f38070a496ed7750391d /pkgs/applications
parentd73f16d6767e99675682f822dac3017bf9af1e83 (diff)
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migrate: init at 3.7.2
Diffstat (limited to 'pkgs/applications')
-rw-r--r--pkgs/applications/science/biology/migrate/default.nix24
1 files changed, 24 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/migrate/default.nix b/pkgs/applications/science/biology/migrate/default.nix
new file mode 100644
index 00000000000..d80e6e7b30d
--- /dev/null
+++ b/pkgs/applications/science/biology/migrate/default.nix
@@ -0,0 +1,24 @@
+{ gccStdenv, fetchurl, zlib, openmpi }:
+
+gccStdenv.mkDerivation rec {
+  version = "3.7.2";
+  pname = "migrate";
+
+  src = fetchurl {
+    url = "https://peterbeerli.com/migrate-html5/download_version3/${pname}-${version}.src.tar.gz";
+    sha256 = "1p2364ffjc56i82snzvjpy6pkf6wvqwvlvlqxliscx2c303fxs8v";
+  };
+
+  buildInputs = [ zlib openmpi ];
+  setSourceRoot = ''sourceRoot=$(echo */src)'';
+  buildFlags = [ "thread" "mpis" ];
+  preInstall = "mkdir -p $out/man/man1";
+
+  meta = with gccStdenv.lib; {
+    description = "Estimates population size, migration, population splitting parameters using genetic/genomic data";
+    homepage = https://peterbeerli.com/migrate-html5/index.html;
+    license = licenses.mit;
+    maintainers = [ maintainers.bzizou ];
+    platforms = platforms.unix;
+  };
+}