summary refs log tree commit diff
path: root/pkgs/applications/science
diff options
context:
space:
mode:
authorFranz Pletz <fpletz@fnordicwalking.de>2019-11-02 15:53:57 +0100
committerFranz Pletz <fpletz@fnordicwalking.de>2019-11-02 15:53:57 +0100
commite39773fe5b7c09ad7aa63824037993f2a5a24694 (patch)
treec12d56ac5619ab5971585afca201e4b9e10ff1db /pkgs/applications/science
parent8f729c0070ec3f78edadeaebcbd110257fe4577e (diff)
downloadnixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar.gz
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar.bz2
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar.lz
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar.xz
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.tar.zst
nixpkgs-e39773fe5b7c09ad7aa63824037993f2a5a24694.zip
megahit: 1.1.4 -> 1.2.9
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/megahit/default.nix13
1 files changed, 5 insertions, 8 deletions
diff --git a/pkgs/applications/science/biology/megahit/default.nix b/pkgs/applications/science/biology/megahit/default.nix
index 56bb35b64df..86414980177 100644
--- a/pkgs/applications/science/biology/megahit/default.nix
+++ b/pkgs/applications/science/biology/megahit/default.nix
@@ -1,23 +1,20 @@
-{ stdenv, fetchFromGitHub, zlib }:
+{ stdenv, fetchFromGitHub, cmake, zlib }:
 
 stdenv.mkDerivation rec {
   pname    = "megahit";
-  version = "1.1.4";
+  version = "1.2.9";
 
   src = fetchFromGitHub {
     owner = "voutcn";
     repo = "megahit";
     rev = "v${version}";
-    sha256 = "011k0776w76l03zmy70kfd3y9zjmdnspfbs9fcxmnl3bdwd36kcw";
+    sha256 = "1r5d9nkdmgjsbrpj43q9hy3s8jwsabaz3ji561v18hy47v58923c";
   };
 
+  nativeBuildInputs = [ cmake ];
   buildInputs = [ zlib ];
 
-  installPhase = ''
-    for bin in megahit_sdbg_build megahit megahit_asm_core megahit_toolkit; do
-        install -vD $bin $out/bin/$bin
-    done
-  '';
+  enableParallelBuilding = true;
 
   meta = with stdenv.lib; {
     description = "An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph";