Merge pull request #173671 from Mindavi/treewide/broken-zhf

treewide: start marking packages broken

31 files changed, 40 insertions, 5 deletions

diff --git a/pkgs/applications/science/astronomy/gildas/default.nix b/pkgs/applications/science/astronomy/gildas/default.nix
index beb3bd92ea5..1c0b1eeefe6 100644
--- a/pkgs/applications/science/astronomy/gildas/default.nix
+++ b/pkgs/applications/science/astronomy/gildas/default.nix
@@ -50,6 +50,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = {
+    broken = stdenv.isDarwin;
     description = "Radioastronomy data analysis software";
     longDescription = ''
       GILDAS is a collection of state-of-the-art software
diff --git a/pkgs/applications/science/astronomy/gravit/default.nix b/pkgs/applications/science/astronomy/gravit/default.nix
index fb5cce02bdb..d6844307d42 100644
--- a/pkgs/applications/science/astronomy/gravit/default.nix
+++ b/pkgs/applications/science/astronomy/gravit/default.nix
@@ -25,6 +25,7 @@ stdenv.mkDerivation rec {
   enableParallelBuilding = true;
 
   meta = {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     homepage = "https://github.com/gak/gravit";
     description = "Beautiful OpenGL-based gravity simulator";
     license = lib.licenses.gpl2Plus;
diff --git a/pkgs/applications/science/astronomy/stellarium/default.nix b/pkgs/applications/science/astronomy/stellarium/default.nix
index df73df2ec28..c2377d6bed2 100644
--- a/pkgs/applications/science/astronomy/stellarium/default.nix
+++ b/pkgs/applications/science/astronomy/stellarium/default.nix
@@ -29,6 +29,7 @@ mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Free open-source planetarium";
     homepage = "http://stellarium.org/";
     license = licenses.gpl2;
diff --git a/pkgs/applications/science/biology/cmtk/default.nix b/pkgs/applications/science/biology/cmtk/default.nix
index 36db47ad168..42ce5f934e8 100644
--- a/pkgs/applications/science/biology/cmtk/default.nix
+++ b/pkgs/applications/science/biology/cmtk/default.nix
@@ -18,6 +18,7 @@ stdenv.mkDerivation rec {
   ];
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Computational Morphometry Toolkit ";
     longDescription = ''A software toolkit for computational morphometry of
       biomedical images, CMTK comprises a set of command line tools and a
diff --git a/pkgs/applications/science/biology/migrate/default.nix b/pkgs/applications/science/biology/migrate/default.nix
index 36790b22b22..31e4eb2fcb4 100644
--- a/pkgs/applications/science/biology/migrate/default.nix
+++ b/pkgs/applications/science/biology/migrate/default.nix
@@ -1,4 +1,4 @@
-{ lib, gccStdenv, fetchurl, zlib, mpi }:
+{ stdenv, lib, gccStdenv, fetchurl, zlib, mpi }:
 
 gccStdenv.mkDerivation rec {
   version = "3.7.2";
@@ -15,6 +15,7 @@ gccStdenv.mkDerivation rec {
   preInstall = "mkdir -p $out/man/man1";
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Estimates population size, migration, population splitting parameters using genetic/genomic data";
     homepage = "https://peterbeerli.com/migrate-html5/index.html";
     license = licenses.mit;
diff --git a/pkgs/applications/science/biology/mrtrix/default.nix b/pkgs/applications/science/biology/mrtrix/default.nix
index 10bfb633f4a..99b6269737d 100644
--- a/pkgs/applications/science/biology/mrtrix/default.nix
+++ b/pkgs/applications/science/biology/mrtrix/default.nix
@@ -86,6 +86,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     homepage = "https://github.com/MRtrix3/mrtrix3";
     description = "Suite of tools for diffusion imaging";
     maintainers = with maintainers; [ bcdarwin ];
diff --git a/pkgs/applications/science/biology/muscle/default.nix b/pkgs/applications/science/biology/muscle/default.nix
index f4f6d0c46e0..54ff58cce71 100644
--- a/pkgs/applications/science/biology/muscle/default.nix
+++ b/pkgs/applications/science/biology/muscle/default.nix
@@ -24,6 +24,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "A multiple sequence alignment method with reduced time and space complexity";
     license     = licenses.publicDomain;
     homepage    = "https://www.drive5.com/muscle/";
diff --git a/pkgs/applications/science/biology/neuron/default.nix b/pkgs/applications/science/biology/neuron/default.nix
index 4dc850f5062..b9c4b16b359 100644
--- a/pkgs/applications/science/biology/neuron/default.nix
+++ b/pkgs/applications/science/biology/neuron/default.nix
@@ -71,6 +71,7 @@ stdenv.mkDerivation rec {
   propagatedBuildInputs = [ readline ncurses which libtool ];
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Simulation environment for empirically-based simulations of neurons and networks of neurons";
 
     longDescription = "NEURON is a simulation environment for developing and exercising models of
diff --git a/pkgs/applications/science/biology/plink-ng/default.nix b/pkgs/applications/science/biology/plink-ng/default.nix
index 26c3e7ba66b..b21ef2d71d6 100644
--- a/pkgs/applications/science/biology/plink-ng/default.nix
+++ b/pkgs/applications/science/biology/plink-ng/default.nix
@@ -31,6 +31,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "A comprehensive update to the PLINK association analysis toolset";
     homepage = "https://www.cog-genomics.org/plink2";
     license = lib.licenses.gpl3;
diff --git a/pkgs/applications/science/biology/subread/default.nix b/pkgs/applications/science/biology/subread/default.nix
index 431bd3788e7..987433a3a6d 100644
--- a/pkgs/applications/science/biology/subread/default.nix
+++ b/pkgs/applications/science/biology/subread/default.nix
@@ -30,6 +30,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "High-performance read alignment, quantification and mutation discovery";
     license = licenses.gpl3;
     maintainers = with maintainers; [ jbedo ];
diff --git a/pkgs/applications/science/biology/svaba/default.nix b/pkgs/applications/science/biology/svaba/default.nix
index 1aed501919f..fa78212ec0b 100644
--- a/pkgs/applications/science/biology/svaba/default.nix
+++ b/pkgs/applications/science/biology/svaba/default.nix
@@ -21,6 +21,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "Structural variant and INDEL caller for DNA sequencing data, using genome-wide local assembly";
     license = licenses.gpl3;
     homepage = "https://github.com/walaj/svaba";
diff --git a/pkgs/applications/science/biology/whisper/default.nix b/pkgs/applications/science/biology/whisper/default.nix
index 8552eede170..4d74ea98109 100644
--- a/pkgs/applications/science/biology/whisper/default.nix
+++ b/pkgs/applications/science/biology/whisper/default.nix
@@ -25,6 +25,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Short read sequence mapper";
     license = licenses.gpl3;
     homepage = "https://github.com/refresh-bio/whisper";
diff --git a/pkgs/applications/science/chemistry/pymol/default.nix b/pkgs/applications/science/chemistry/pymol/default.nix
index 5f7c0c1f6be..c281f63b3bf 100644
--- a/pkgs/applications/science/chemistry/pymol/default.nix
+++ b/pkgs/applications/science/chemistry/pymol/default.nix
@@ -1,4 +1,5 @@
-{ lib
+{ stdenv
+, lib
 , fetchFromGitHub
 , makeDesktopItem
 , python3
@@ -67,6 +68,7 @@ python3Packages.buildPythonApplication rec {
   '';
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     inherit description;
     homepage = "https://www.pymol.org/";
     license = licenses.mit;
diff --git a/pkgs/applications/science/electronics/gaw/default.nix b/pkgs/applications/science/electronics/gaw/default.nix
index 7f0b5625e85..acb5c7c96af 100644
--- a/pkgs/applications/science/electronics/gaw/default.nix
+++ b/pkgs/applications/science/electronics/gaw/default.nix
@@ -19,6 +19,7 @@ stdenv.mkDerivation rec {
   buildInputs = [ gtk3 ];
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Gtk Analog Wave viewer";
     longDescription = ''
       Gaw is a software tool for displaying analog waveforms from
diff --git a/pkgs/applications/science/electronics/xschem/default.nix b/pkgs/applications/science/electronics/xschem/default.nix
index 25fa0aca467..646f374ba48 100644
--- a/pkgs/applications/science/electronics/xschem/default.nix
+++ b/pkgs/applications/science/electronics/xschem/default.nix
@@ -29,6 +29,7 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "format" ];
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "Schematic capture and netlisting EDA tool";
     longDescription = ''
       Xschem is a schematic capture program, it allows creation of
diff --git a/pkgs/applications/science/electronics/xyce/default.nix b/pkgs/applications/science/electronics/xyce/default.nix
index 8d9b02d909e..40c6408b666 100644
--- a/pkgs/applications/science/electronics/xyce/default.nix
+++ b/pkgs/applications/science/electronics/xyce/default.nix
@@ -168,6 +168,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin;
     description = "High-performance analog circuit simulator";
     longDescription = ''
       Xyce is a SPICE-compatible, high-performance analog circuit simulator,
diff --git a/pkgs/applications/science/logic/aspino/default.nix b/pkgs/applications/science/logic/aspino/default.nix
index 02f6dba4ded..a9e39b3daf3 100644
--- a/pkgs/applications/science/logic/aspino/default.nix
+++ b/pkgs/applications/science/logic/aspino/default.nix
@@ -47,5 +47,7 @@ stdenv.mkDerivation {
     homepage = "https://alviano.net/software/maxino/";
     # See pkgs/applications/science/logic/glucose/default.nix
     badPlatforms = [ "aarch64-linux" ];
+    # src/MaxSatSolver.cc:280:62: error: ordered comparison between pointer and zero ('unsigned int *' and 'int')
+    broken = (stdenv.isDarwin && stdenv.isx86_64); # broken since 2019-05-07 on hydra
   };
 }
diff --git a/pkgs/applications/science/logic/formula/default.nix b/pkgs/applications/science/logic/formula/default.nix
index 13c13713a72..09c29d720a7 100644
--- a/pkgs/applications/science/logic/formula/default.nix
+++ b/pkgs/applications/science/logic/formula/default.nix
@@ -23,6 +23,7 @@ buildDotnetModule rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin;
     description = "Formal Specifications for Verification and Synthesis";
     homepage = "https://github.com/VUISIS/formula-dotnet";
     license = licenses.mspl;
diff --git a/pkgs/applications/science/logic/hol/default.nix b/pkgs/applications/science/logic/hol/default.nix
index 8427249c4ce..de47df098da 100644
--- a/pkgs/applications/science/logic/hol/default.nix
+++ b/pkgs/applications/science/logic/hol/default.nix
@@ -66,6 +66,7 @@ stdenv.mkDerivation {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "Interactive theorem prover based on Higher-Order Logic";
     longDescription = ''
       HOL4 is the latest version of the HOL interactive proof
diff --git a/pkgs/applications/science/logic/mcrl2/default.nix b/pkgs/applications/science/logic/mcrl2/default.nix
index da9231efb81..a042bd6c751 100644
--- a/pkgs/applications/science/logic/mcrl2/default.nix
+++ b/pkgs/applications/science/logic/mcrl2/default.nix
@@ -16,6 +16,7 @@ stdenv.mkDerivation rec {
   dontWrapQtApps = true;
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "A toolset for model-checking concurrent systems and protocols";
     longDescription = ''
       A formal specification language with an associated toolset,
diff --git a/pkgs/applications/science/logic/open-wbo/default.nix b/pkgs/applications/science/logic/open-wbo/default.nix
index 193f603656d..3677eb39de6 100644
--- a/pkgs/applications/science/logic/open-wbo/default.nix
+++ b/pkgs/applications/science/logic/open-wbo/default.nix
@@ -19,6 +19,7 @@ stdenv.mkDerivation {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "State-of-the-art MaxSAT and Pseudo-Boolean solver";
     maintainers = with maintainers; [ gebner ];
     platforms = platforms.unix;
diff --git a/pkgs/applications/science/logic/opensmt/default.nix b/pkgs/applications/science/logic/opensmt/default.nix
index 9f104ab80a6..e86a24ffa4c 100644
--- a/pkgs/applications/science/logic/opensmt/default.nix
+++ b/pkgs/applications/science/logic/opensmt/default.nix
@@ -29,6 +29,7 @@ stdenv.mkDerivation rec {
   ];
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "A satisfiability modulo theory (SMT) solver";
     maintainers = [ maintainers.raskin ];
     platforms = platforms.linux;
diff --git a/pkgs/applications/science/logic/vampire/default.nix b/pkgs/applications/science/logic/vampire/default.nix
index 307c75b272b..92cad0c61e5 100644
--- a/pkgs/applications/science/logic/vampire/default.nix
+++ b/pkgs/applications/science/logic/vampire/default.nix
@@ -47,6 +47,7 @@ stdenv.mkDerivation rec {
   '';
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     homepage = "https://vprover.github.io/";
     description = "The Vampire Theorem Prover";
     platforms = platforms.unix;
diff --git a/pkgs/applications/science/logic/verit/default.nix b/pkgs/applications/science/logic/verit/default.nix
index 6c0d1061dca..8c9bb7f2005 100644
--- a/pkgs/applications/science/logic/verit/default.nix
+++ b/pkgs/applications/science/logic/verit/default.nix
@@ -22,6 +22,7 @@ stdenv.mkDerivation {
   '';
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "An open, trustable and efficient SMT-solver";
     homepage = "https://verit.loria.fr/";
     license = licenses.bsd3;
diff --git a/pkgs/applications/science/math/ginac/default.nix b/pkgs/applications/science/math/ginac/default.nix
index 1fff1156c1a..0ceefe9b5dd 100644
--- a/pkgs/applications/science/math/ginac/default.nix
+++ b/pkgs/applications/science/math/ginac/default.nix
@@ -25,6 +25,7 @@ stdenv.mkDerivation rec {
   configureFlags = [ "--disable-rpath" ];
 
   meta = with lib; {
+    broken = stdenv.isDarwin;
     description = "GiNaC is Not a CAS";
     homepage = "https://www.ginac.de/";
     maintainers = with maintainers; [ lovek323 ];
diff --git a/pkgs/applications/science/math/speedcrunch/default.nix b/pkgs/applications/science/math/speedcrunch/default.nix
index a4e15060fe3..239b5fd6d36 100644
--- a/pkgs/applications/science/math/speedcrunch/default.nix
+++ b/pkgs/applications/science/math/speedcrunch/default.nix
@@ -1,4 +1,4 @@
-{ mkDerivation, lib, fetchFromBitbucket, cmake, qtbase, qttools }:
+{ stdenv, mkDerivation, lib, fetchFromBitbucket, cmake, qtbase, qttools }:
 
 mkDerivation rec {
   pname = "speedcrunch";
@@ -32,6 +32,6 @@ mkDerivation rec {
     maintainers = with maintainers; [ gebner j0hax ];
     inherit (qtbase.meta) platforms;
     # works with qt 5.6 and qt 5.8
-    broken = builtins.compareVersions qtbase.version "5.7.0" == 0;
+    broken = builtins.compareVersions qtbase.version "5.7.0" == 0 || stdenv.isDarwin;
   };
 }
diff --git a/pkgs/applications/science/misc/boinc/default.nix b/pkgs/applications/science/misc/boinc/default.nix
index 05304ef6a9e..d0955a4d70c 100644
--- a/pkgs/applications/science/misc/boinc/default.nix
+++ b/pkgs/applications/science/misc/boinc/default.nix
@@ -46,6 +46,10 @@ stdenv.mkDerivation rec {
     homepage = "https://boinc.berkeley.edu/";
     license = licenses.lgpl2Plus;
     platforms = platforms.linux;  # arbitrary choice
+    # checking for gcc options needed to detect all undeclared functions... cannot detect
+    # configure: error: in `/build/boinc-7.18.1-src':
+    # configure: error: cannot make gcc report undeclared builtins
+    broken = stdenv.isAarch64;
     maintainers = with maintainers; [ Luflosi ];
   };
 }
diff --git a/pkgs/applications/science/misc/graphia/default.nix b/pkgs/applications/science/misc/graphia/default.nix
index 4f452c96b8e..30677d6067e 100644
--- a/pkgs/applications/science/misc/graphia/default.nix
+++ b/pkgs/applications/science/misc/graphia/default.nix
@@ -24,11 +24,12 @@ stdenv.mkDerivation rec {
   ];
 
   meta = with lib; {
+    # never built on Hydra https://hydra.nixos.org/job/nixpkgs/trunk/graphia.x86_64-darwin
+    broken = (stdenv.isLinux && stdenv.isAarch64) || stdenv.isDarwin;
     description = "A visualisation tool for the creation and analysis of graphs.";
     homepage = "https://graphia.app";
     license = licenses.gpl3Only;
     maintainers = [ maintainers.bgamari ];
     platforms = platforms.all;
-    broken = stdenv.isDarwin; # never built on Hydra https://hydra.nixos.org/job/nixpkgs/trunk/graphia.x86_64-darwin
   };
 }
diff --git a/pkgs/applications/science/misc/openmvg/default.nix b/pkgs/applications/science/misc/openmvg/default.nix
index 585c5ac4f39..81c377a91c7 100644
--- a/pkgs/applications/science/misc/openmvg/default.nix
+++ b/pkgs/applications/science/misc/openmvg/default.nix
@@ -40,6 +40,7 @@ stdenv.mkDerivation rec {
   hardeningDisable = [ "all" ];
 
   meta = {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "A library for computer-vision scientists and targeted for the Multiple View Geometry community";
     homepage = "https://openmvg.readthedocs.io/en/latest/";
     license = lib.licenses.mpl20;
diff --git a/pkgs/applications/science/misc/tulip/default.nix b/pkgs/applications/science/misc/tulip/default.nix
index 87a05f146e9..a2d3f3d9a2a 100644
--- a/pkgs/applications/science/misc/tulip/default.nix
+++ b/pkgs/applications/science/misc/tulip/default.nix
@@ -20,6 +20,7 @@ stdenv.mkDerivation rec {
   doCheck = false;
 
   meta = {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "A visualization framework for the analysis and visualization of relational data";
 
     longDescription =
diff --git a/pkgs/applications/science/physics/nnpdf/default.nix b/pkgs/applications/science/physics/nnpdf/default.nix
index 8674132d840..f7121627829 100644
--- a/pkgs/applications/science/physics/nnpdf/default.nix
+++ b/pkgs/applications/science/physics/nnpdf/default.nix
@@ -62,6 +62,7 @@ stdenv.mkDerivation rec {
   ];
 
   meta = with lib; {
+    broken = (stdenv.isLinux && stdenv.isAarch64);
     description = "An open-source machine learning framework for global analyses of parton distributions";
     homepage = "https://docs.nnpdf.science/";
     license = licenses.gpl3Only;