summary refs log tree commit diff
path: root/pkgs/applications/science/misc/snakemake/default.nix
diff options
context:
space:
mode:
authorDmitry Kalinkin <dmitry.kalinkin@gmail.com>2021-06-22 17:18:35 -0400
committerDmitry Kalinkin <dmitry.kalinkin@gmail.com>2021-06-24 11:36:26 -0400
commite3678ae8a6c08e1c2b39cfccfa521ffb0e23087d (patch)
treef1f704d1592d39a12296e05491ac57ac7ff6b237 /pkgs/applications/science/misc/snakemake/default.nix
parent97d56c16c69af24fe4e39aedf0aa4d63546b7116 (diff)
downloadnixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar.gz
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar.bz2
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar.lz
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar.xz
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.tar.zst
nixpkgs-e3678ae8a6c08e1c2b39cfccfa521ffb0e23087d.zip
snakemake: 6.0.5 -> 6.5.0
Diffstat (limited to 'pkgs/applications/science/misc/snakemake/default.nix')
-rw-r--r--pkgs/applications/science/misc/snakemake/default.nix7
1 files changed, 5 insertions, 2 deletions
diff --git a/pkgs/applications/science/misc/snakemake/default.nix b/pkgs/applications/science/misc/snakemake/default.nix
index 0818ca79622..8919f85e44d 100644
--- a/pkgs/applications/science/misc/snakemake/default.nix
+++ b/pkgs/applications/science/misc/snakemake/default.nix
@@ -2,11 +2,12 @@
 
 python3Packages.buildPythonApplication rec {
   pname = "snakemake";
-  version = "6.0.5";
+  version = "6.5.0";
 
   propagatedBuildInputs = with python3Packages; [
     appdirs
     ConfigArgParse
+    connection-pool
     datrie
     docutils
     filelock
@@ -19,13 +20,15 @@ python3Packages.buildPythonApplication rec {
     ratelimiter
     requests
     smart-open
+    stopit
+    tabulate
     toposort
     wrapt
   ];
 
   src = python3Packages.fetchPypi {
     inherit pname version;
-    sha256 = "9441169034cce46086a8b45486d75175db645b932e766d28fed312ec837792d3";
+    sha256 = "b166ec74537e02553fcaf0ddcffc32dfdb9dcaa1260af297a56eded6a179b2ee";
   };
 
   doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json