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authorLuis Pedro Coelho <luis@luispedro.org>2016-06-07 23:44:42 +0200
committerobadz <obadz-git@obadz.com>2016-06-08 17:25:20 +0100
commitbd617cb18585dc09f37e85b93b4342658e4ab74c (patch)
tree3bf08a2339973cc72ac57bd06455e92316d63bb9 /pkgs/applications/science/biology
parentab70ae2edfbd4252ebbe792814c158d97e28cc65 (diff)
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init bwa at 0.7.15
Closes #16064
Diffstat (limited to 'pkgs/applications/science/biology')
-rw-r--r--pkgs/applications/science/biology/bwa/default.nix27
1 files changed, 27 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/bwa/default.nix b/pkgs/applications/science/biology/bwa/default.nix
new file mode 100644
index 00000000000..d7b8aca2ff5
--- /dev/null
+++ b/pkgs/applications/science/biology/bwa/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  name    = "bwa-${version}";
+  version = "0.7.15";
+
+  src = fetchFromGitHub {
+    owner  = "lh3";
+    repo   = "bwa";
+    rev    = "v${version}";
+    sha256 = "1aasdr3lik42gafi9lds7xw0wgv8ijjll1g32d7jm04pp235c7nl";
+  };
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp bwa $out/bin
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A software package for mapping low-divergent sequences against a large reference genome, such as the human genome";
+    license     = licenses.gpl3;
+    homepage    = http://bio-bwa.sourceforge.net/;
+    maintainers = with maintainers; [ luispedro ];
+  };
+}