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| author | annalee <150648636+a-n-n-a-l-e-e@users.noreply.github.com> | 2023-11-17 07:29:27 +0000 |
|---|---|---|
| committer | annalee <150648636+a-n-n-a-l-e-e@users.noreply.github.com> | 2023-11-17 07:29:27 +0000 |
| commit | e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71 (patch) | |
| tree | 4edb0b17bfd7a48651f9f665b331e619c676bb1a | |
| parent | b7137a71c154787a4b39a5bfa9f16e52a3d6b137 (diff) | |
| download | nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar.gz nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar.bz2 nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar.lz nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar.xz nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.tar.zst nixpkgs-e7e7df50fbbd28adcd5f2a04bc0d90b4380ffa71.zip | |
python311Packages.msprime: apply upstream patch; fix build
| -rw-r--r-- | pkgs/development/python-modules/msprime/default.nix | 11 |
1 files changed, 11 insertions, 0 deletions
diff --git a/pkgs/development/python-modules/msprime/default.nix b/pkgs/development/python-modules/msprime/default.nix index 008ce7f2711..2ec32c255df 100644 --- a/pkgs/development/python-modules/msprime/default.nix +++ b/pkgs/development/python-modules/msprime/default.nix @@ -1,6 +1,7 @@ { lib , buildPythonPackage , fetchPypi +, fetchpatch , oldest-supported-numpy , setuptools-scm , wheel @@ -26,6 +27,16 @@ buildPythonPackage rec { hash = "sha256-YAJa2f0w2CenKubnYLbP8HodDhabLB2hAkyw/CPkp6o="; }; + patches = [ + # upstream patch fixes 2 failing unittests. remove on update + (fetchpatch { + name = "python311.patch"; + url = "https://github.com/tskit-dev/msprime/commit/639125ec942cb898cf4a80638f229e11ce393fbc.patch"; + hash = "sha256-peli4tdu8Bv21xIa5H8SRdfjQnTMO72IPFqybmSBSO8="; + includes = [ "tests/test_ancestry.py" ]; + }) + ]; + nativeBuildInputs = [ gsl oldest-supported-numpy |