{ stdenv, fetchurl, blas, bzip2, gfortran, liblapack, libX11, libXmu, libXt
, libjpeg, libpng, libtiff, ncurses, pango, pcre, perl, readline, tcl
, texLive, tk, xz, zlib, less, texinfo, graphviz, icu, pkgconfig, bison
, imake, which, jdk, atlas
}:
stdenv.mkDerivation rec {
name = "R-3.0.1";
src = fetchurl {
url = "http://ftp5.gwdg.de/pub/misc/cran/src/base/R-3/${name}.tar.gz";
sha256 = "0d3iv382bsyz6ad5fk382x7sy3qzgpqvd0fw26r0648lyf54i45g";
};
buildInputs = [ blas bzip2 gfortran liblapack libX11 libXmu libXt
libXt libjpeg libpng libtiff ncurses pango pcre perl readline tcl
texLive tk xz zlib less texinfo graphviz icu pkgconfig bison imake
which jdk atlas
];
patches = [ ./no-usr-local-search-paths.patch ];
preConfigure = ''
configureFlagsArray=(
--disable-lto
--with-blas="-L${atlas}/lib -lf77blas -latlas"
--with-lapack="-L${liblapack}/lib -llapack"
--with-readline
--with-tcltk --with-tcl-config="${tcl}/lib/tclConfig.sh" --with-tk-config="${tk}/lib/tkConfig.sh"
--with-cairo
--with-libpng
--with-jpeglib
--with-libtiff
--with-system-zlib
--with-system-bzlib
--with-system-pcre
--with-system-xz
--with-ICU
R_SHELL="${stdenv.shell}"
JAVA_HOME="${jdk}"
LDFLAGS="-L${gfortran.gcc}/lib"
)
echo "TCLLIBPATH=${tk}/lib" >>etc/Renviron.in
'';
installTargets = [ "install" "install-info" "install-pdf" ];
doCheck = true;
enableParallelBuilding = true;
meta = {
homepage = "http://www.r-project.org/";
description = "a free software environment for statistical computing and graphics";
license = stdenv.lib.licenses.gpl2Plus;
longDescription = ''
GNU R is a language and environment for statistical computing and
graphics that provides a wide variety of statistical (linear and
nonlinear modelling, classical statistical tests, time-series
analysis, classification, clustering, ...) and graphical
techniques, and is highly extensible. One of R's strengths is the
ease with which well-designed publication-quality plots can be
produced, including mathematical symbols and formulae where
needed. R is an integrated suite of software facilities for data
manipulation, calculation and graphical display. It includes an
effective data handling and storage facility, a suite of operators
for calculations on arrays, in particular matrices, a large,
coherent, integrated collection of intermediate tools for data
analysis, graphical facilities for data analysis and display
either on-screen or on hardcopy, and a well-developed, simple and
effective programming language which includes conditionals, loops,
user-defined recursive functions and input and output facilities.
'';
platforms = stdenv.lib.platforms.linux;
maintainers = [ stdenv.lib.maintainers.simons ];
};
}