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author | Sébastien Maret <sebastien.maret@icloud.com> | 2019-03-05 14:43:33 +0100 |
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committer | Frederik Rietdijk <freddyrietdijk@fridh.nl> | 2020-02-09 10:21:30 +0100 |
commit | 4ea8f051ac2bf8edfdc5e712191fb6e34212a95b (patch) | |
tree | e799433dd789ec2431f0248fe5c849a5e28ef0c1 | |
parent | ca44e9514cf8689915c20627ce4a085a0bc3fb4a (diff) | |
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galario: init at 1.2.1
Co-Authored-By: Daniel Schaefer <git@danielschaefer.me>
-rw-r--r-- | pkgs/development/libraries/galario/default.nix | 78 | ||||
-rw-r--r-- | pkgs/top-level/all-packages.nix | 2 | ||||
-rw-r--r-- | pkgs/top-level/python-packages.nix | 5 |
3 files changed, 85 insertions, 0 deletions
diff --git a/pkgs/development/libraries/galario/default.nix b/pkgs/development/libraries/galario/default.nix new file mode 100644 index 00000000000..08450e56983 --- /dev/null +++ b/pkgs/development/libraries/galario/default.nix @@ -0,0 +1,78 @@ +{ stdenv +, fetchzip +, fetchFromGitHub +, cmake +, fftw +, fftwFloat +, enablePython ? false +, pythonPackages +, llvmPackages +}: +let + # CMake recipes are needed to build galario + # Build process would usually download them + great-cmake-cookoff = fetchzip { + url = "https://github.com/UCL/GreatCMakeCookOff/archive/v2.1.9.tar.gz"; + sha256 = "1yd53b5gx38g6f44jmjk4lc4igs3p25z6616hfb7aq79ly01q0w2"; + }; +in +stdenv.mkDerivation rec { + pname = "galario"; + version = "1.2.1"; + + src = fetchFromGitHub { + owner = "mtazzari"; + repo = pname; + rev = "v${version}"; + sha256 = "1akz7md7ly16a89zr880c265habakqdg9sj8iil90klqa0i21w6g"; + }; + + nativeBuildInputs = [ cmake ]; + + buildInputs = [ fftw fftwFloat ] + ++ stdenv.lib.optional enablePython pythonPackages.python + ++ stdenv.lib.optional stdenv.isDarwin llvmPackages.openmp + ; + + propagatedBuildInputs = stdenv.lib.optional enablePython [ + pythonPackages.numpy + pythonPackages.cython + pythonPackages.pytest + ]; + + checkInputs = stdenv.lib.optional enablePython pythonPackages.scipy; + + preConfigure = '' + mkdir -p build/external/src + cp -r ${great-cmake-cookoff} build/external/src/GreatCMakeCookOff + chmod -R 777 build/external/src/GreatCMakeCookOff + ''; + + preCheck = '' + ${if stdenv.isDarwin then "export DYLD_LIBRARY_PATH=$(pwd)/src/" else "export LD_LIBRARY_PATH=$(pwd)/src/"} + ${if enablePython then "sed -i -e 's|^#!.*|#!${stdenv.shell}|' python/py.test.sh" else ""} + ''; + + doCheck = true; + + postInstall = stdenv.lib.optionalString (stdenv.isDarwin && enablePython) '' + install_name_tool -change libgalario.dylib $out/lib/libgalario.dylib $out/lib/python*/site-packages/galario/double/libcommon.so + install_name_tool -change libgalario_single.dylib $out/lib/libgalario_single.dylib $out/lib/python*/site-packages/galario/single/libcommon.so + ''; + + meta = with stdenv.lib; { + description = "GPU Accelerated Library for Analysing Radio Interferometer Observations"; + longDescription = '' + Galario is a library that exploits the computing power of modern + graphic cards (GPUs) to accelerate the comparison of model + predictions to radio interferometer observations. Namely, it + speeds up the computation of the synthetic visibilities given a + model image (or an axisymmetric brightness profile) and their + comparison to the observations. + ''; + homepage = "https://mtazzari.github.io/galario/"; + license = licenses.lgpl3; + maintainers = [ maintainers.smaret ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 62ddc0820da..98b11fb4775 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -24519,6 +24519,8 @@ in fityk = callPackage ../applications/science/misc/fityk { }; + galario = callPackage ../development/libraries/galario { }; + gildas = callPackage ../applications/science/astronomy/gildas { }; gplates = callPackage ../applications/science/misc/gplates { diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 6dc9f39238f..975df9f16b9 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -3601,6 +3601,11 @@ in { futures = callPackage ../development/python-modules/futures { }; + galario = toPythonModule (pkgs.galario.override { + enablePython = true; + pythonPackages = self; + }); + gcovr = callPackage ../development/python-modules/gcovr { }; gdal = toPythonModule (pkgs.gdal.override { |