{ stdenv , buildPythonPackage , fetchPypi , pythonOlder , nose , matplotlib , nibabel , numpy , scipy , sympy , python }: buildPythonPackage rec { version = "0.4.2"; pname = "nipy"; disabled = pythonOlder "2.6"; src = fetchPypi { inherit pname version; sha256 = "1pn731nsczrx198i2gadffqmfbhviglrclv6xxwhnbv6w5hfs2yk"; }; buildInputs = stdenv.lib.optional doCheck [ nose ]; propagatedBuildInputs = [ matplotlib nibabel numpy scipy sympy ]; checkPhase = '' # wants to be run in a different directory mkdir nosetests cd nosetests ${python.interpreter} -c "import nipy; nipy.test()" rm -rf . ''; # failing test: # nipy.algorithms.statistics.models.tests.test_olsR.test_results(11.593139639404727, 11.593140144880794, 6) # disagrees by 1 at 6th decimal place # erroring tests: # nipy.modalities.fmri.fmristat.tests.test_FIAC.test_altprotocol # nipy.modalities.fmri.fmristat.tests.test_FIAC.test_agreement # nipy.tests.test_scripts.test_nipy_4d_realign # because `nipy_4d_realign` script isn't found at test time; works from nix-shell, so could be patched # nipy.tests.test_scripts.test_nipy_3_4d # ditto re.: `nipy_3_4d` script doCheck = false; meta = with stdenv.lib; { homepage = https://nipy.org/nipy/; description = "Software for structural and functional neuroimaging analysis"; license = licenses.bsd3; }; }