--- origsrc/Doxyfile.in	2008-04-26 16:57:32.000000000 -0500
+++ src/Doxyfile.in	2012-03-29 18:15:56.649709100 -0500
@@ -460,14 +460,14 @@ WARN_LOGFILE           =
 # with spaces.
 
 INPUT                  = \
-                        ./popt.c \
-                        ./popt.h \
-                        ./poptconfig.c \
-                        ./popthelp.c \
-                        ./poptint.c \
-                        ./poptint.h \
-                        ./poptparse.c \
-			./system.h
+                        @srcdir@/popt.c \
+                        @srcdir@/popt.h \
+                        @srcdir@/poptconfig.c \
+                        @srcdir@/popthelp.c \
+                        @srcdir@/poptint.c \
+                        @srcdir@/poptint.h \
+                        @srcdir@/poptparse.c \
+			@srcdir@/system.h
 
 # If the value of the INPUT tag contains directories, you can use the 
 # FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp 
@@ -658,7 +658,7 @@ HTML_HEADER            =
 # each generated HTML page. If it is left blank doxygen will generate a 
 # standard footer.
 
-HTML_FOOTER            = footer_no_timestamp.html
+HTML_FOOTER            = @srcdir@/footer_no_timestamp.html
 
 # The HTML_STYLESHEET tag can be used to specify a user-defined cascading 
 # style sheet that is used by each HTML page. It can be used to