{ lib , stdenv , fetchurl , ocaml , ncurses }: stdenv.mkDerivation { pname = "megam"; version = "0.92"; src = fetchurl { url = "http://hal3.name/megam/megam_src.tgz"; sha256 = "dc0e9f59ff8513449fe3bd40b260141f89c88a4edf6ddc8b8a394c758e49724e"; }; patches = [ ./ocaml-includes.patch ./ocaml-3.12.patch ]; postPatch = '' # Deprecated in ocaml 3.10 https://github.com/ocaml/ocaml/commit/f6190f3d0c49c5220d443ee8d03ca5072d68aa87 # Deprecated in ocaml 3.08 https://github.com/ocaml/ocaml/commit/0c7aecb88dc696f66f49f3bed54a037361a26b8d substituteInPlace fastdot_c.c --replace copy_double caml_copy_double --replace Bigarray_val Caml_ba_array_val --replace caml_bigarray caml_ba_array # They were already deprecated in 3.12 https://v2.ocaml.org/releases/3.12/htmlman/libref/Array.html substituteInPlace abffs.ml main.ml --replace create_matrix make_matrix substituteInPlace intHashtbl.ml --replace Array.create Array.make ''; strictDeps = true; nativeBuildInputs = [ ocaml ]; buildInputs = [ ncurses ]; makeFlags = [ "CAML_INCLUDES=${ocaml}/lib/ocaml/caml" ("WITHBIGARRAY=" + lib.optionalString (lib.versionOlder ocaml.version "4.08.0") "bigarray.cma") "all" "opt" ]; # see https://bugzilla.redhat.com/show_bug.cgi?id=435559 dontStrip = true; installPhase = '' runHook preInstall install -Dm755 megam $out/bin/megam install -Dm755 megam.opt $out/bin/megam.opt runHook postInstall ''; meta = with lib; { description = "MEGA Model Optimization Package"; longDescription = '' The software here is an implementation of maximum likelihood and maximum a posterior optimization of the parameters of these models. The algorithms used are much more efficient than the iterative scaling techniques used in almost every other maxent package out there. ''; homepage = "http://www.umiacs.umd.edu/~hal/megam"; license = "non-commercial"; maintainers = with maintainers; [ leixb ]; platforms = platforms.unix; }; }