{ stdenv, fetchurl, zlib, htslib, perl, ncurses ? null }: stdenv.mkDerivation rec { pname = "samtools"; version = "1.10"; src = fetchurl { url = "https://github.com/samtools/samtools/releases/download/${version}/${pname}-${version}.tar.bz2"; sha256 = "119ms0dpydw8dkh3zc4yyw9zhdzgv12px4l2kayigv31bpqcb7kv"; }; nativeBuildInputs = [ perl ]; buildInputs = [ zlib ncurses htslib ]; configureFlags = [ "--with-htslib=${htslib}" ] ++ stdenv.lib.optional (ncurses == null) "--without-curses"; preCheck = '' patchShebangs test/ ''; enableParallelBuilding = true; doCheck = true; meta = with stdenv.lib; { description = "Tools for manipulating SAM/BAM/CRAM format"; license = licenses.mit; homepage = http://www.htslib.org/; platforms = platforms.unix; maintainers = [ maintainers.mimame ]; }; }