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* Merge pull request #34119 from arcadio/masteradisbladis2018-01-25
|\ | | | | igv: 2.3.98 -> 2.4.6
| * igv: 2.3.98 -> 2.4.6Arcadio Rubio García2018-01-21
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* | Merge pull request #34199 from arcadio/kallistoSamuel Leathers2018-01-24
|\ \ | | | | | | kallisto: init at 0.43.1
| * | kallisto: init at 0.43.1Arcadio Rubio García2018-01-24
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* | R: fix dylib install_name on darwinDaiderd Jordan2018-01-24
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* | Merge pull request #34169 from Infinisil/add/almondsFrederik Rietdijk2018-01-23
|\ \ | | | | | | almonds: init at 2015-12-27
| * | almonds: init at 2015-12-27Silvan Mosberger2018-01-23
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* | | Merge pull request #34125 from arcadio/bwaadisbladis2018-01-23
|\ \ \ | | | | | | | | bwa: 0.7.16a -> 0.7.17
| * | | bwa: 0.7.16a -> 0.7.17Arcadio Rubio García2018-01-22
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* | | Merge pull request #34139 from arcadio/bedtoolsadisbladis2018-01-23
|\ \ \ | |_|/ |/| | bedtools: 2.26.0 -> 2.27.1
| * | bedtools: 2.26.0 -> 2.27.1Arcadio Rubio García2018-01-22
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* | Merge pull request #34140 from arcadio/picardadisbladis2018-01-22
|\ \ | | | | | | picard-tools: 2.7.1 -> 2.17.4
| * | picard-tools: 2.7.1 -> 2.17.4Arcadio Rubio García2018-01-22
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* / bowtie2: 2.3.3.1 -> 2.3.4Arcadio Rubio García2018-01-22
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* Merge pull request #33924 from markuskowa/molden-prSarah Brofeldt2018-01-21
|\ | | | | molden: init at 5.7
| * molden: init at 5.7Markus Kowalewski2018-01-15
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* | weka: 3.8.1 -> 3.8.2Miguel Madrid Mencía2018-01-18
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* | maintainers: remove mornfall from packagesYegor Timoshenko2018-01-17
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* dcm2niix: cmake is native, styleAshley Gillman2018-01-15
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* dcm2niix: init at 1.0.20170130Ashley Gillman2018-01-15
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* bitscope: refactored to pass nixpkgs-lintDavid Asabina2018-01-14
| | | | | | | | | | | | The linter (nixpkgs-lint) was not able to find the bitscope packages because `recurseIntoAttrs` was not applied to the suite's set. The name supplied to `buildFHSUserEnv` produces a binary that corresponds to the binary names in the deb packages (e.g.: bitscope-dso, bitscope-chart, bitscope-logic, etc), however; this name does not constitute a valid nixpkgs name. Valid nixpkgs names satisfy the `/(.*)(-[0-9].*)$/` pattern, therefore a valid name is merged into the derivation produced by `buildFHSUserEnv`.
* Merge pull request #33851 from vbgl/why3-0.88.3adisbladis2018-01-15
|\ | | | | why3: 0.88.1 -> 0.88.3
| * why3: 0.88.1 -> 0.88.3Vincent Laporte2018-01-14
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* | Merge pull request #33839 from mimadrid/update/gephi-0.9.2adisbladis2018-01-15
|\ \ | | | | | | gephi: 0.9.1 -> 0.9.2
| * | gephi: 0.9.1 -> 0.9.2Miguel Madrid Mencía2018-01-13
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* / cytoscape: 3.5.1 -> 3.6.0Miguel Madrid Mencía2018-01-13
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* qgroundcontrol: 2.9.4 -> 3.2.7, unbreak buildadisbladis2018-01-13
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* librepcb-unstable: init at 2017-12-29 (#33630)Luz2018-01-11
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* symbiyosys: 2017.12.06 -> 2018.01.10Austin Seipp2018-01-10
| | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
* giac: fix buildSymphorien Gibol2018-01-10
| | | | | | giac was broken somewhere between 310ad4 and b33b4a, see https://hydra.nixos.org/build/67137469 libgfortran.so.3 was not found
* treewide: homepage+src updates (found by repology, #33263)Samuel Dionne-Riel2018-01-05
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* z3: 4.5.0-2017-11-06 -> 4.6.0Austin Seipp2018-01-03
| | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
* Merge branch 'master' into stagingVladimír Čunát2017-12-31
|\ | | | | | | | | A few thousand rebuilds from master, again. Hydra: ?compare=1422362
| * cntk: mark as brokenOrivej Desh2017-12-31
| | | | | | | | | | It never succeeded to build. @abbradar did not respond at https://github.com/NixOS/nixpkgs/commit/94dc37d6223ff6e47745afa92d2fb0efcb3df44f
| * tamarin-prover: enable testsAustin Seipp2017-12-30
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
| * nixpkgs: add sapic as a dependency to tamarin-proverAustin Seipp2017-12-30
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
| * nixpkgs: init sapic 0.9Austin Seipp2017-12-30
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
| * nixpkgs: add 'graphviz' to tamarin-prover dependenciesAustin Seipp2017-12-30
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
| * nixpkgs: add tamarin-prover 1.3.0 (dev) toolAustin Seipp2017-12-30
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
| * bitscope: init at 2017-12-28David Asabina2017-12-30
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* | Merge pull request #26805 from obsidiansystems/cross-elegantJohn Ericson2017-12-30
|\ \ | | | | | | Make cross compilation elegant
| * | treewide: Don't use envHook anymoreJohn Ericson2017-12-30
| | | | | | | | | | | | | | | This commits needs a MAJOR audit as I oftentimes just guessed which of `$hostOffset`, `$targetOffset`, or a fixed offset should be used.
* | | Merge remote-tracking branch 'upstream/master' into HEADFrederik Rietdijk2017-12-30
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| * | wxmaxima: build with cmakeOrivej Desh2017-12-29
| | | | | | | | | | | | | | | | | | | | | | | | Fixes reported version number: see https://github.com/NixOS/nixpkgs/pull/31657#issuecomment-354414642 "make check" did not run any tests with autotools, and is not defined with cmake. ("make test" is not defined too.)
* | | Merge branch 'master' into stagingVladimír Čunát2017-12-29
|\| | | | | | | | | | | Hydra: ?compare=1421760
| * | fdr: 4.2.0 -> 4.2.3Nick Hu2017-12-29
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| * | coq: lablgtk is only needed for coqideVincent Laporte2017-12-23
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* | | mariadb: lib -> connector-cRobin Gloster2017-12-29
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* | Specify the coq version in a more consistent locationJohn Wiegley2017-12-21
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* | snpeff: 4.3p -> 4.3tJustin Bedo2017-12-21
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