diff options
Diffstat (limited to 'pkgs')
193 files changed, 993 insertions, 574 deletions
diff --git a/pkgs/applications/networking/newsreaders/pan/default.nix b/pkgs/applications/networking/newsreaders/pan/default.nix index 4a1940ae654..9d51a76f536 100644 --- a/pkgs/applications/networking/newsreaders/pan/default.nix +++ b/pkgs/applications/networking/newsreaders/pan/default.nix @@ -2,7 +2,7 @@ , stdenv, fetchurl, pkgconfig, gtk3, gtkspell3 ? null , perl, gmime2, gettext, intltool, itstool, libxml2, dbus-glib, libnotify, gnutls , makeWrapper, gnupg -, gnomeSupport ? true, libgnome-keyring3 +, gnomeSupport ? true, gnome3, libsecret }: assert spellChecking -> gtkspell3 != null; @@ -17,10 +17,10 @@ stdenv.mkDerivation { sha256 = "1b4wamv33hprghcjk903bpvnd233yxyrm18qnh13alc8h1553nk8"; }; - nativeBuildInputs = [ pkgconfig makeWrapper ]; - buildInputs = [ gtk3 perl gmime2 gettext intltool itstool libxml2 dbus-glib libnotify gnutls ] + nativeBuildInputs = [ pkgconfig gettext intltool itstool libxml2 makeWrapper ]; + buildInputs = [ gtk3 gmime2 libnotify gnutls ] ++ stdenv.lib.optional spellChecking gtkspell3 - ++ stdenv.lib.optional gnomeSupport libgnome-keyring3; + ++ stdenv.lib.optionals gnomeSupport [ libsecret gnome3.gcr ]; configureFlags = [ "--with-dbus" diff --git a/pkgs/applications/science/molecular-dynamics/lammps/default.nix b/pkgs/applications/science/molecular-dynamics/lammps/default.nix index 9a89b88d7a5..03e37ad9d93 100644 --- a/pkgs/applications/science/molecular-dynamics/lammps/default.nix +++ b/pkgs/applications/science/molecular-dynamics/lammps/default.nix @@ -1,25 +1,37 @@ -{ stdenv, writeText, fetchurl, - libpng, fftw, - mpiSupport ? false, mpi ? null +{ lib +, bash +, stdenv +, writeText +, fetchFromGitHub +, libpng +, gzip +, fftw +, openblas +, mpiSupport ? false, mpi ? null }: assert mpiSupport -> mpi != null; stdenv.mkDerivation rec { # LAMMPS has weird versioning converted to ISO 8601 format - version = "2016-02-16"; + version = "patch_2Aug2018"; name = "lammps-${version}"; - src = fetchurl { - url = "mirror://sourceforge/lammps/lammps-16Feb16.tar.gz"; - sha256 = "1yzfbkxma3xa1288rnn66h4w0smbmjkwq1fx1y60pjiw0prmk105"; + lammps_packages = "asphere body class2 colloid compress coreshell dipole granular kspace manybody mc misc molecule opt peri qeq replica rigid shock snap srd user-reaxc"; + lammps_includes = "-DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_MEMALIGN=64"; + + src = fetchFromGitHub { + owner = "lammps"; + repo = "lammps"; + rev = "${version}"; + sha256 = "1ph9pr7s11wgmspmnhxa55bh1pq2cyl8iimfi62lbpbpl9pr1ilc"; }; passthru = { inherit mpi; }; - buildInputs = [ fftw libpng ] + buildInputs = [ fftw libpng openblas gzip bash ] ++ (stdenv.lib.optionals mpiSupport [ mpi ]); # Must do manual build due to LAMMPS requiring a seperate build for @@ -27,13 +39,19 @@ stdenv.mkDerivation rec { builder = writeText "builder.sh" '' source $stdenv/setup - tar xzf $src - cd lammps-*/src - make mode=exe ${if mpiSupport then "mpi" else "serial"} SHELL=$SHELL LMP_INC="-DLAMMPS_GZIP -DLAMMPS_PNG" FFT_PATH=-DFFT_FFTW3 FFT_LIB=-lfftw3 JPG_LIB=-lpng - make mode=shlib ${if mpiSupport then "mpi" else "serial"} SHELL=$SHELL LMP_INC="-DLAMMPS_GZIP -DLAMMPS_PNG" FFT_PATH=-DFFT_FFTW3 FFT_LIB=-lfftw3 JPG_LIB=-lpng + mkdir lammps + cp -r $src/lib $src/src lammps + chmod -R 755 lammps/src/ + cd lammps/src + for pack in ${lammps_packages}; do make "yes-$pack" SHELL=$SHELL; done + make mode=exe ${if mpiSupport then "mpi" else "serial"} SHELL=$SHELL LMP_INC="${lammps_includes}" FFT_PATH=-DFFT_FFTW3 FFT_LIB=-lfftw3 JPG_LIB=-lpng + make mode=shlib ${if mpiSupport then "mpi" else "serial"} SHELL=$SHELL LMP_INC="${lammps_includes}" FFT_PATH=-DFFT_FFTW3 FFT_LIB=-lfftw3 JPG_LIB=-lpng mkdir -p $out/bin - cp -v lmp_* $out/bin/lammps + cp -v lmp_* $out/bin/ + + mkdir -p $out/include + cp -v *.h $out/include/ mkdir -p $out/lib cp -v liblammps* $out/lib/ @@ -51,5 +69,6 @@ stdenv.mkDerivation rec { homepage = http://lammps.sandia.gov; license = stdenv.lib.licenses.gpl2; platforms = stdenv.lib.platforms.linux; + maintainers = with lib.maintainers; [ costrouc ]; }; } diff --git a/pkgs/build-support/setup-hooks/make-wrapper.sh b/pkgs/build-support/setup-hooks/make-wrapper.sh index f75b285bacf..5d5ddcaa8d7 100644 --- a/pkgs/build-support/setup-hooks/make-wrapper.sh +++ b/pkgs/build-support/setup-hooks/make-wrapper.sh @@ -11,15 +11,18 @@ assertExecutable() { # makeWrapper EXECUTABLE ARGS # ARGS: -# --argv0 NAME : set name of executed process to NAME -# (otherwise it’s called …-wrapped) -# --set VAR VAL : add VAR with value VAL to the executable’s environment -# --unset VAR : remove VAR from the environment -# --run COMMAND : run command before the executable -# The command can push extra flags to a magic list variable -# extraFlagsArray, which are then added to the invocation -# of the executable -# --add-flags FLAGS : add FLAGS to invocation of executable +# --argv0 NAME : set name of executed process to NAME +# (otherwise it’s called …-wrapped) +# --set VAR VAL : add VAR with value VAL to the executable’s +# environment +# --set-default VAR VAL : like --set, but only adds VAR if not already set in +# the environment +# --unset VAR : remove VAR from the environment +# --run COMMAND : run command before the executable +# The command can push extra flags to a magic list +# variable extraFlagsArray, which are then added to +# the invocation of the executable +# --add-flags FLAGS : add FLAGS to invocation of executable # --prefix ENV SEP VAL : suffix/prefix ENV with VAL, separated by SEP # --suffix diff --git a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix index e909a356866..d6402a3b5b6 100644 --- a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libxslt, which, libX11, gnome3, gtk3, glib +{ stdenv, fetchurl, substituteAll, pkgconfig, libxslt, which, libX11, gnome3, gtk3, glib , intltool, libxml2, xkeyboard_config, isocodes, itstool, wayland , libseccomp, bubblewrap, gobjectIntrospection, gtk-doc, docbook_xsl }: @@ -30,18 +30,16 @@ stdenv.mkDerivation rec { propagatedBuildInputs = [ gnome3.gsettings-desktop-schemas ]; patches = [ - ./bubblewrap-paths.patch + (substituteAll { + src = ./bubblewrap-paths.patch; + BUBBLEWRAP_BIN = "${bubblewrap}/bin/bwrap"; + }) ]; configureFlags = [ "--enable-gtk-doc" ]; - postPatch = '' - substituteInPlace libgnome-desktop/gnome-desktop-thumbnail-script.c --subst-var-by \ - BUBBLEWRAP_BIN "${bubblewrap}/bin/bwrap" - ''; - passthru = { updateScript = gnome3.updateScript { packageName = "gnome-desktop"; diff --git a/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix b/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix index acb32bc174c..cce192c9f29 100644 --- a/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-keyring/default.nix @@ -1,6 +1,6 @@ -{ stdenv, fetchurl, pkgconfig, dbus, libgcrypt, libtasn1, pam, python2, glib, libxslt -, intltool, pango, gcr, gdk_pixbuf, atk, p11-kit, openssh, wrapGAppsHook -, docbook_xsl, docbook_xml_dtd_42, gnome3 }: +{ stdenv, fetchurl, pkgconfig, dbus, libgcrypt, pam, python2, glib, libxslt +, gettext, gcr, libcap_ng, libselinux, p11-kit, openssh, wrapGAppsHook +, docbook_xsl, docbook_xml_dtd_43, gnome3 }: stdenv.mkDerivation rec { name = "gnome-keyring-${version}"; @@ -11,21 +11,15 @@ stdenv.mkDerivation rec { sha256 = "0sk4las4ji8wv9nx8mldzqccmpmkvvr9pdwv9imj26r10xyin5w1"; }; - passthru = { - updateScript = gnome3.updateScript { packageName = "gnome-keyring"; attrPath = "gnome3.gnome-keyring"; }; - }; - outputs = [ "out" "dev" ]; - buildInputs = with gnome3; [ - dbus libgcrypt pam gtk3 libgnome-keyring openssh - pango gcr gdk_pixbuf atk p11-kit + buildInputs = [ + glib libgcrypt pam openssh libcap_ng libselinux + gcr p11-kit ]; - propagatedBuildInputs = [ glib libtasn1 libxslt ]; - nativeBuildInputs = [ - pkgconfig intltool docbook_xsl docbook_xml_dtd_42 wrapGAppsHook + pkgconfig gettext libxslt docbook_xsl docbook_xml_dtd_43 wrapGAppsHook ]; configureFlags = [ @@ -48,6 +42,13 @@ stdenv.mkDerivation rec { make check ''; + passthru = { + updateScript = gnome3.updateScript { + packageName = "gnome-keyring"; + attrPath = "gnome3.gnome-keyring"; + }; + }; + meta = with stdenv.lib; { description = "Collection of components in GNOME that store secrets, passwords, keys, certificates and make them available to applications"; homepage = https://wiki.gnome.org/Projects/GnomeKeyring; diff --git a/pkgs/desktops/xfce4-13/xfce4-settings/default.nix b/pkgs/desktops/xfce4-13/xfce4-settings/default.nix index d08c1f96fdd..6eb917fd76f 100644 --- a/pkgs/desktops/xfce4-13/xfce4-settings/default.nix +++ b/pkgs/desktops/xfce4-13/xfce4-settings/default.nix @@ -1,4 +1,4 @@ -{ mkXfceDerivation, automakeAddFlags, dbus-glib, exo, garcon, gtk3 +{ mkXfceDerivation, automakeAddFlags, exo, garcon, gtk3 , libnotify ? null, libxfce4ui, libxfce4util, libxklavier ? null , upower ? null, xfconf, xf86inputlibinput ? null }: @@ -19,7 +19,6 @@ mkXfceDerivation rec { nativeBuildInputs = [ automakeAddFlags ]; buildInputs = [ - dbus-glib exo garcon gtk3 diff --git a/pkgs/development/libraries/mesa/default.nix b/pkgs/development/libraries/mesa/default.nix index e1a9477dcd6..50fb2daad70 100644 --- a/pkgs/development/libraries/mesa/default.nix +++ b/pkgs/development/libraries/mesa/default.nix @@ -63,7 +63,7 @@ let in let - version = "18.1.5"; + version = "18.1.7"; branch = head (splitString "." version); in @@ -77,7 +77,7 @@ let self = stdenv.mkDerivation { "ftp://ftp.freedesktop.org/pub/mesa/older-versions/${branch}.x/${version}/mesa-${version}.tar.xz" "https://mesa.freedesktop.org/archive/mesa-${version}.tar.xz" ]; - sha256 = "69dbe6f1a6660386f5beb85d4fcf003ee23023ed7b9a603de84e9a37e8d98dea"; + sha256 = "655e3b32ce3bdddd5e6e8768596e5d4bdef82d0dd37067c324cc4b2daa207306"; }; prePatch = "patchShebangs ."; @@ -100,6 +100,7 @@ let self = stdenv.mkDerivation { "--with-dri-driverdir=$(drivers)/lib/dri" "--with-dri-searchpath=${libglvnd.driverLink}/lib/dri" "--with-platforms=x11,wayland,drm" + "--enable-texture-float" ] ++ (optional (galliumDrivers != []) ("--with-gallium-drivers=" + diff --git a/pkgs/development/libraries/pagmo2/default.nix b/pkgs/development/libraries/pagmo2/default.nix new file mode 100644 index 00000000000..367cef46dc4 --- /dev/null +++ b/pkgs/development/libraries/pagmo2/default.nix @@ -0,0 +1,46 @@ +{ lib +, fetchFromGitHub +, stdenv +, cmake +, eigen +, nlopt +, ipopt +, boost +, writeText +}: + +stdenv.mkDerivation rec { + name = "pagmo2-${version}"; + version = "2.8"; + + src = fetchFromGitHub { + owner = "esa"; + repo = "pagmo2"; + rev = "v${version}"; + sha256 = "1xwxamcn3fkwr62jn6bkanrwy0cvsksf75hfwx4fvl56awnbz41z"; + }; + + buildInputs = [ cmake eigen nlopt ipopt boost ]; + + preBuild = '' + cp -r $src/* . + ''; + + cmakeFlags = [ "-DPAGMO_BUILD_TESTS=no" + "-DPAGMO_WITH_EIGEN3=yes" "-DPAGMO_WITH_NLOPT=yes" + "-DNLOPT_LIBRARY=${nlopt}/lib/libnlopt_cxx.so" "-DPAGMO_WITH_IPOPT=yes" + "-DCMAKE_CXX_FLAGS='-fuse-ld=gold'" ]; + + checkPhase = '' + ctest + ''; + + # All but one test pass skip for now (tests also take about 30 min to compile) + doCheck = false; + + meta = { + homepage = https://esa.github.io/pagmo2/; + description = "Scientific library for massively parallel optimization"; + license = stdenv.lib.licenses.gpl3Plus; + }; +} diff --git a/pkgs/development/libraries/umockdev/default.nix b/pkgs/development/libraries/umockdev/default.nix index 1ff71fa1811..b89450b810b 100644 --- a/pkgs/development/libraries/umockdev/default.nix +++ b/pkgs/development/libraries/umockdev/default.nix @@ -1,10 +1,12 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, libtool +{ stdenv, fetchFromGitHub, autoreconfHook, umockdev, gobjectIntrospection , pkgconfig, glib, systemd, libgudev, vala }: stdenv.mkDerivation rec { name = "umockdev-${version}"; version = "0.11.3"; + outputs = [ "bin" "out" "dev" "doc" ]; + src = fetchFromGitHub { owner = "martinpitt"; repo = "umockdev"; @@ -19,7 +21,7 @@ stdenv.mkDerivation rec { buildInputs = [ glib systemd libgudev ]; - nativeBuildInputs = [ autoreconfHook libtool pkgconfig vala ]; + nativeBuildInputs = [ autoreconfHook pkgconfig vala gobjectIntrospection ]; enableParallelBuilding = true; diff --git a/pkgs/development/perl-modules/DB_File/default.nix b/pkgs/development/perl-modules/DB_File/default.nix index b34ea387366..b3ca12421e4 100644 --- a/pkgs/development/perl-modules/DB_File/default.nix +++ b/pkgs/development/perl-modules/DB_File/default.nix @@ -1,11 +1,11 @@ {fetchurl, buildPerlPackage, db}: buildPerlPackage rec { - name = "DB_File-1.841"; + name = "DB_File-1.842"; src = fetchurl { url = "mirror://cpan/authors/id/P/PM/PMQS/${name}.tar.gz"; - sha256 = "11fks42kgscpia0mxx4lc9krm7q4gv6w7m5h3m2jr3dl7viv36hn"; + sha256 = "0w2d99vs9qarng2f9fpg3gchfdzy6an13507jhclcl8wv183h5hg"; }; preConfigure = '' diff --git a/pkgs/development/python-modules/APScheduler/default.nix b/pkgs/development/python-modules/APScheduler/default.nix index 5e108cd7dcf..f3c8c57f576 100644 --- a/pkgs/development/python-modules/APScheduler/default.nix +++ b/pkgs/development/python-modules/APScheduler/default.nix @@ -20,11 +20,11 @@ buildPythonPackage rec { pname = "APScheduler"; - version = "3.5.1"; + version = "3.5.3"; src = fetchPypi { inherit pname version; - sha256 = "952c8f46a11f32b9d5bfbe3e347dac2cdf0680d8b4799590dc9c3a9865b73b65"; + sha256 = "6599bc78901ee7e9be85cbd073d9cc155c42d2bc867c5cde4d4d1cc339ebfbeb"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/Flask-PyMongo/default.nix b/pkgs/development/python-modules/Flask-PyMongo/default.nix index 6a14607ad27..862fd84c492 100644 --- a/pkgs/development/python-modules/Flask-PyMongo/default.nix +++ b/pkgs/development/python-modules/Flask-PyMongo/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "Flask-PyMongo"; - version = "2.0.1"; + version = "2.1.0"; src = fetchPypi { inherit pname version; - sha256 = "6a02add52ac245064720c2bb8b02074b9a5a0d9498279510ea2a537512fd3fa5"; + sha256 = "0b99dd99985660ebbc4b34bb44550f88a527cbc573faa01febccce3c4ab28347"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/XlsxWriter/default.nix b/pkgs/development/python-modules/XlsxWriter/default.nix index be5ad2a5c1c..a72fabb35cd 100644 --- a/pkgs/development/python-modules/XlsxWriter/default.nix +++ b/pkgs/development/python-modules/XlsxWriter/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "XlsxWriter"; - version = "1.0.5"; + version = "1.0.7"; src = fetchPypi { inherit pname version; - sha256 = "bd4661c04a68621cb2ebc07c38b8b2e98e30bf213a16e1cf3675b61e26ca9bf2"; + sha256 = "1224b971c174f33b954f9a1906679d0049399bd6a5a8c78bbae2d6c2c4facebd"; }; meta = { diff --git a/pkgs/development/python-modules/absl-py/default.nix b/pkgs/development/python-modules/absl-py/default.nix index 1cb5275a6c3..17a0240f7e8 100644 --- a/pkgs/development/python-modules/absl-py/default.nix +++ b/pkgs/development/python-modules/absl-py/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "absl-py"; - version = "0.2.2"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "e0eb8358b549552b1cc5972350bc3e41dd0a926c15b3ff95ce60f3c78c80824c"; + sha256 = "932e6acb1a57bdcfb784a1ce6ad46a2f50b89d355a5619ed6df60db1414173d2"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/aiofiles/default.nix b/pkgs/development/python-modules/aiofiles/default.nix index 572c18171d1..55d68f93f2c 100644 --- a/pkgs/development/python-modules/aiofiles/default.nix +++ b/pkgs/development/python-modules/aiofiles/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "aiofiles"; - version = "0.3.2"; + version = "0.4.0"; src = fetchPypi { inherit pname version; - sha256 = "852a493a877b73e11823bfd4e8e5ef2610d70d12c9eaed961bcd9124d8de8c10"; + sha256 = "021ea0ba314a86027c166ecc4b4c07f2d40fc0f4b3a950d1868a0f2571c2bbee"; }; disabled = pythonOlder "3.3"; diff --git a/pkgs/development/python-modules/aiohue/default.nix b/pkgs/development/python-modules/aiohue/default.nix index 1492a15aadf..d5572bb6d1d 100644 --- a/pkgs/development/python-modules/aiohue/default.nix +++ b/pkgs/development/python-modules/aiohue/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "aiohue"; - version = "1.6.0"; + version = "1.7.0"; src = fetchPypi { inherit pname version; - sha256 = "87f0f86865e88ea715ab358b1e5f2838b79ee7cdc0bdf762e9ed60aaf4c8bd4a"; + sha256 = "26989babdc3f38575164b60b9536309271d58db005a03045b6e9cca4fc5201d8"; }; propagatedBuildInputs = [ aiohttp ]; diff --git a/pkgs/development/python-modules/allpairspy/default.nix b/pkgs/development/python-modules/allpairspy/default.nix index e21b43c60e0..d1f97d8e7c7 100644 --- a/pkgs/development/python-modules/allpairspy/default.nix +++ b/pkgs/development/python-modules/allpairspy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "allpairspy"; - version = "2.4.0"; + version = "2.4.1"; src = fetchPypi { inherit pname version; - sha256 = "9fb7962ee523bd96c5098cd3c97ac1b8eb73021d3df9314657ee9de00f52e034"; + sha256 = "e8b35751f91692bf0318091b3f44cdf9bbbe3f37a2ff4786eaffc09dc7114fb3"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/argon2_cffi/default.nix b/pkgs/development/python-modules/argon2_cffi/default.nix index ce371076256..120928656b4 100644 --- a/pkgs/development/python-modules/argon2_cffi/default.nix +++ b/pkgs/development/python-modules/argon2_cffi/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "argon2_cffi"; - version = "18.1.0"; + version = "18.3.0"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "7e4b75611b73f53012117ad21cdde7a17b32d1e99ff6799f22d827eb83a2a59b"; + sha256 = "003f588de43a817af6ecc1c06103fa0801de63849db3cb0f37576bb2da29043d"; }; propagatedBuildInputs = [ cffi six ]; diff --git a/pkgs/development/python-modules/ase/default.nix b/pkgs/development/python-modules/ase/default.nix new file mode 100644 index 00000000000..1f7b9419278 --- /dev/null +++ b/pkgs/development/python-modules/ase/default.nix @@ -0,0 +1,36 @@ +{ lib +, fetchurl +, buildPythonPackage +, numpy +, scipy +, matplotlib +, flask +, pillow +, psycopg2 +}: + +buildPythonPackage rec { + version = "3.16.2"; + pname = "ase"; + + src = fetchurl { + url = "https://gitlab.com/${pname}/${pname}/-/archive/${version}/${pname}-${version}.tar.gz"; + sha256 = "171j3f4a261cfnqjq98px5fldxql65i3jgf60wc945xvh0mbc8ds"; + }; + + propagatedBuildInputs = [ numpy scipy matplotlib flask pillow psycopg2 ]; + + checkPhase = '' + $out/bin/ase test + ''; + + # tests just hang most likely due to something with subprocesses and cli + doCheck = false; + + meta = { + description = "Atomic Simulation Environment"; + homepage = https://wiki.fysik.dtu.dk/ase/; + license = lib.licenses.lgpl21Plus; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/astroid/default.nix b/pkgs/development/python-modules/astroid/default.nix index ea087ce4f5f..ccf6f405526 100644 --- a/pkgs/development/python-modules/astroid/default.nix +++ b/pkgs/development/python-modules/astroid/default.nix @@ -5,13 +5,13 @@ buildPythonPackage rec { pname = "astroid"; - version = "2.0.1"; + version = "2.0.4"; disabled = pythonOlder "3.4"; src = fetchPypi { inherit pname version; - sha256 = "218e36cf8d98a42f16214e8670819ce307fa707d1dcf7f9af84c7aede1febc7f"; + sha256 = "c7013d119ec95eb626f7a2011f0b63d0c9a095df9ad06d8507b37084eada1a8d"; }; # From astroid/__pkginfo__.py diff --git a/pkgs/development/python-modules/astropy/default.nix b/pkgs/development/python-modules/astropy/default.nix index 4901b798955..acbd7c2ec65 100644 --- a/pkgs/development/python-modules/astropy/default.nix +++ b/pkgs/development/python-modules/astropy/default.nix @@ -7,7 +7,7 @@ buildPythonPackage rec { pname = "astropy"; - version = "3.0.3"; + version = "3.0.4"; disabled = !isPy3k; # according to setup.py @@ -15,7 +15,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "6af07abe5e263820a3dec93832a6ad74005013071490e125afbc6514411721da"; + sha256 = "f5d37d20632ba74bd0b12a85179c12f64a9ea037ffc916d8a2de3be4f4656c76"; }; propagatedBuildInputs = [ pytest numpy ]; # yes it really has pytest in install_requires diff --git a/pkgs/development/python-modules/async_generator/default.nix b/pkgs/development/python-modules/async_generator/default.nix index 4f46376b62d..6bf77ecd75e 100644 --- a/pkgs/development/python-modules/async_generator/default.nix +++ b/pkgs/development/python-modules/async_generator/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "async_generator"; - version = "1.9"; + version = "1.10"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "b7d5465c6174fe86dba498ececb175f93a6097ffb7cc91946405e1f05b848371"; + sha256 = "6ebb3d106c12920aaae42ccb6f787ef5eefdcdd166ea3d628fa8476abe712144"; }; checkInputs = [ pytest pytest-asyncio ]; diff --git a/pkgs/development/python-modules/autobahn/default.nix b/pkgs/development/python-modules/autobahn/default.nix index 30479ce8266..87a337a154d 100644 --- a/pkgs/development/python-modules/autobahn/default.nix +++ b/pkgs/development/python-modules/autobahn/default.nix @@ -1,22 +1,22 @@ { stdenv, buildPythonPackage, fetchPypi, isPy3k, isPy33, unittest2, mock, pytest, trollius, asyncio, - pytest-asyncio, futures, + pytest-asyncio, futures, cffi, six, twisted, txaio, zope_interface }: buildPythonPackage rec { pname = "autobahn"; - version = "18.6.1"; + version = "18.8.1"; src = fetchPypi { inherit pname version; - sha256 = "2f41bfc512ec482044fa8cfa74182118dedd87e03b3494472d9ff1b5a1e27d24"; + sha256 = "b69858e0be4bff8437b0bd82a0db1cbef7405e16bd9354ba587c043d6d5e1ad9"; }; # Upstream claim python2 support, but tests require pytest-asyncio which # is pythn3 only. Therefore, tests are skipped for python2. doCheck = isPy3k; - buildInputs = stdenv.lib.optionals isPy3k [ unittest2 mock pytest pytest-asyncio ]; - propagatedBuildInputs = [ six twisted zope_interface txaio ] ++ + checkInputs = stdenv.lib.optionals isPy3k [ unittest2 mock pytest pytest-asyncio ]; + propagatedBuildInputs = [ cffi six twisted zope_interface txaio ] ++ (stdenv.lib.optional isPy33 asyncio) ++ (stdenv.lib.optionals (!isPy3k) [ trollius futures ]); @@ -29,6 +29,5 @@ buildPythonPackage rec { homepage = "https://crossbar.io/autobahn"; license = licenses.mit; maintainers = with maintainers; [ nand0p ]; - platforms = platforms.all; }; } diff --git a/pkgs/development/python-modules/backports_lzma/default.nix b/pkgs/development/python-modules/backports_lzma/default.nix index c650076d4c0..409546e559a 100644 --- a/pkgs/development/python-modules/backports_lzma/default.nix +++ b/pkgs/development/python-modules/backports_lzma/default.nix @@ -25,6 +25,9 @@ if !(pythonOlder "3.3") then null else buildPythonPackage rec { PYTHONPATH=$out/${python.sitePackages}:$PYTHONPATH ${python.interpreter} -m unittest discover -s test ''; + # Relative import does not seem to function. + doCheck = false; + meta = { description = "Backport of Python 3.3's 'lzma' module for XZ/LZMA compressed files"; homepage = https://github.com/peterjc/backports.lzma; diff --git a/pkgs/development/python-modules/beautifulsoup4/default.nix b/pkgs/development/python-modules/beautifulsoup4/default.nix index 6ae838265b1..7cf4f36a2f0 100644 --- a/pkgs/development/python-modules/beautifulsoup4/default.nix +++ b/pkgs/development/python-modules/beautifulsoup4/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "beautifulsoup4"; - version = "4.6.0"; + version = "4.6.3"; src = fetchPypi { inherit pname version; - sha256 = "12cf0ygpz9srpfh9gx2f9ba0swa1rzypv3sm4r0hmjyw6b4nm2w0"; + sha256 = "90f8e61121d6ae58362ce3bed8cd997efb00c914eae0ff3d363c32f9a9822d10"; }; buildInputs = [ nose ]; diff --git a/pkgs/development/python-modules/bitmath/default.nix b/pkgs/development/python-modules/bitmath/default.nix index bb2e6046886..092ad6c1003 100644 --- a/pkgs/development/python-modules/bitmath/default.nix +++ b/pkgs/development/python-modules/bitmath/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "bitmath"; - version = "1.3.1.2"; + version = "1.3.3.1"; src = fetchPypi { inherit pname version; - sha256 = "1k8d1wmxqjc8cqzaixpxf45k6dl1kqhblr0g4wyjl0qa18q8wasd"; + sha256 = "293325f01e65defe966853111df11d39215eb705a967cb115851da8c4cfa3eb8"; }; checkInputs = [ (if isPy3k then progressbar33 else progressbar231) mock ]; diff --git a/pkgs/development/python-modules/bleach/default.nix b/pkgs/development/python-modules/bleach/default.nix index 786564b92e0..3c5f1d44190 100644 --- a/pkgs/development/python-modules/bleach/default.nix +++ b/pkgs/development/python-modules/bleach/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "bleach"; - version = "2.1.3"; + version = "2.1.4"; src = fetchPypi { inherit pname version; - sha256 = "eb7386f632349d10d9ce9d4a838b134d4731571851149f9cc2c05a9a837a9a44"; + sha256 = "0ee95f6167129859c5dce9b1ca291ebdb5d8cd7e382ca0e237dfd0dad63f63d8"; }; checkInputs = [ pytest pytestrunner ]; diff --git a/pkgs/development/python-modules/bootstrapped-pip/default.nix b/pkgs/development/python-modules/bootstrapped-pip/default.nix index b320db51e3c..613be1f7d6b 100644 --- a/pkgs/development/python-modules/bootstrapped-pip/default.nix +++ b/pkgs/development/python-modules/bootstrapped-pip/default.nix @@ -9,9 +9,9 @@ let }; setuptools_source = fetchPypi { pname = "setuptools"; - version = "40.0.0"; + version = "40.2.0"; format = "wheel"; - sha256 = "d68abee4eed409fbe8c302ac4d8429a1ffef912cd047a903b5701c024048dd49"; + sha256 = "ea3796a48a207b46ea36a9d26de4d0cc87c953a683a7b314ea65d666930ea8e6"; }; in stdenv.mkDerivation rec { diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix index f1475aed693..32e527e8b67 100644 --- a/pkgs/development/python-modules/botocore/default.nix +++ b/pkgs/development/python-modules/botocore/default.nix @@ -7,15 +7,16 @@ , simplejson , mock , nose +, urllib3 }: buildPythonPackage rec { pname = "botocore"; - version = "1.10.65"; + version = "1.11.1"; src = fetchPypi { inherit pname version; - sha256 = "35f626029a6b17bfd503ce3379b121606e3f965edcab2612bc75ce8603fdf08c"; + sha256 = "5b2d2393c02a082d605dac13c1322c3c553a4d4cf23de7b48268ae7f4a105eb3"; }; propagatedBuildInputs = [ @@ -24,6 +25,7 @@ buildPythonPackage rec { docutils ordereddict simplejson + urllib3 ]; checkInputs = [ mock nose ]; diff --git a/pkgs/development/python-modules/breathe/default.nix b/pkgs/development/python-modules/breathe/default.nix index a76b7b2611b..645f75eb323 100644 --- a/pkgs/development/python-modules/breathe/default.nix +++ b/pkgs/development/python-modules/breathe/default.nix @@ -1,12 +1,12 @@ { lib, fetchPypi, buildPythonPackage, docutils, six, sphinx, isPy3k }: buildPythonPackage rec { - version = "4.9.1"; + version = "4.10.0"; pname = "breathe"; src = fetchPypi { inherit pname version; - sha256 = "76e1f3706efeda2610d9a8e7b421d2877ff0654a3fe6d3190a8686536111a684"; + sha256 = "e94370b8b607a32d9611ed8246e635f02c21dc6847f04e888a00f66a12694eff"; }; propagatedBuildInputs = [ docutils six sphinx ]; diff --git a/pkgs/development/python-modules/btrees/default.nix b/pkgs/development/python-modules/btrees/default.nix index c031c872da3..c96d305a7f6 100644 --- a/pkgs/development/python-modules/btrees/default.nix +++ b/pkgs/development/python-modules/btrees/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "BTrees"; - version = "4.5.0"; + version = "4.5.1"; buildInputs = [ transaction ]; propagatedBuildInputs = [ persistent zope_interface ]; @@ -17,7 +17,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "46b02cb69b26a5238db771ea1955b503df73ecf254bb8063af4c61999fc75b5c"; + sha256 = "dcc096c3cf92efd6b9365951f89118fd30bc209c9af83bf050a28151a9992786"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/bugwarrior/default.nix b/pkgs/development/python-modules/bugwarrior/default.nix index ada8397f975..844aebbbb96 100644 --- a/pkgs/development/python-modules/bugwarrior/default.nix +++ b/pkgs/development/python-modules/bugwarrior/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "bugwarrior"; - version = "1.5.1"; + version = "1.6.0"; src = fetchPypi { inherit pname version; - sha256 = "0kxknjbw5kchd88i577vlzibg8j60r7zzdhbnragj9wg5s3w60xb"; + sha256 = "cfa4fac19b4f4638928347b8fe192315f72813c3e8ed668867e5891338c7e4ec"; }; buildInputs = [ mock unittest2 nose /* jira megaplan */ ]; diff --git a/pkgs/development/python-modules/buildout/default.nix b/pkgs/development/python-modules/buildout/default.nix index 9efc53ebe6d..c75b9fdb6cc 100644 --- a/pkgs/development/python-modules/buildout/default.nix +++ b/pkgs/development/python-modules/buildout/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "zc.buildout"; - version = "2.2.5"; + version = "2.12.1"; src = fetchPypi { inherit pname version; - sha256 = "fb08f24f9e51e647e29d714f6e9ad51a4ea28673dddeed831315617bb5a805d0"; + sha256 = "1e180b62fd129a68cb3a9ec8eb0ef457e18921269a93e87ef2cc34519415332d"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/cairocffi/default.nix b/pkgs/development/python-modules/cairocffi/default.nix index 13d00d0529c..39799daca21 100644 --- a/pkgs/development/python-modules/cairocffi/default.nix +++ b/pkgs/development/python-modules/cairocffi/default.nix @@ -17,11 +17,11 @@ buildPythonPackage rec { pname = "cairocffi"; - version = "0.8.1"; + version = "0.9.0"; src = fetchPypi { inherit pname version; - sha256 = "0y373vafv7q35msg7gqdn7niifr3j4j4n070hflxshahs59irss7"; + sha256 = "15386c3a9e08823d6826c4491eaccc7b7254b1dc587a3b9ce60c350c3f990337"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/celery/default.nix b/pkgs/development/python-modules/celery/default.nix index 71911da08f4..8eef07ac3bb 100644 --- a/pkgs/development/python-modules/celery/default.nix +++ b/pkgs/development/python-modules/celery/default.nix @@ -2,7 +2,18 @@ pytest, case, kombu, billiard, pytz, anyjson, amqp, eventlet }: -buildPythonPackage rec { +let + + # Needed for celery + pytest_32 = pytest.overridePythonAttrs( oldAttrs: rec { + version = "3.2.5"; + src = oldAttrs.src.override { + inherit version; + sha256 = "6d5bd4f7113b444c55a3bbb5c738a3dd80d43563d063fc42dcb0aaefbdd78b81"; + }; + }); + +in buildPythonPackage rec { pname = "celery"; version = "4.2.0"; diff --git a/pkgs/development/python-modules/cement/default.nix b/pkgs/development/python-modules/cement/default.nix index 9b744957540..8947ff436fa 100644 --- a/pkgs/development/python-modules/cement/default.nix +++ b/pkgs/development/python-modules/cement/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "cement"; - version = "2.10.12"; + version = "3.0.0"; src = fetchPypi { inherit pname version; - sha256 = "58efb4eacd9ec977ce797a364a13851de6e42392bbde5287d44294f06c5a2f70"; + sha256 = "e50e1033d61d18b36787a60d52cad0d3fe20780e7e2f78f0204bde32000645f9"; }; # Disable test tests since they depend on a memcached server running on diff --git a/pkgs/development/python-modules/certifi/default.nix b/pkgs/development/python-modules/certifi/default.nix index 3bc686121cf..40b3338fdec 100644 --- a/pkgs/development/python-modules/certifi/default.nix +++ b/pkgs/development/python-modules/certifi/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "certifi"; - version = "2018.4.16"; + version = "2018.8.24"; src = fetchPypi { inherit pname version; - sha256 = "13e698f54293db9f89122b0581843a782ad0934a4fe0172d2a980ba77fc61bb7"; + sha256 = "376690d6f16d32f9d1fe8932551d80b23e9d393a8578c5633a2ed39a64861638"; }; meta = { diff --git a/pkgs/development/python-modules/cftime/default.nix b/pkgs/development/python-modules/cftime/default.nix index 425a53987ca..9190f274a24 100644 --- a/pkgs/development/python-modules/cftime/default.nix +++ b/pkgs/development/python-modules/cftime/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "cftime"; - version = "1.0.0"; + version = "1.0.1"; src = fetchPypi { inherit pname version; - sha256 = "f62fe79ed2ad38f4211477e59f6f045c91278351f4ce7578e33ddf52fb121ea8"; + sha256 = "20556931f546838d09be5d589482dfae6164e0d403f0aab2163c006b680d3b92"; }; checkInputs = [ pytest coveralls pytestcov ]; diff --git a/pkgs/development/python-modules/chainer/default.nix b/pkgs/development/python-modules/chainer/default.nix index d332d99cf80..d0467888a88 100644 --- a/pkgs/development/python-modules/chainer/default.nix +++ b/pkgs/development/python-modules/chainer/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "chainer"; - version = "4.3.0"; + version = "4.4.0"; src = fetchPypi { inherit pname version; - sha256 = "a83044256edb1946c47cb9ae687d195c2aa0deaef46ab85a8ffc4a01f7001683"; + sha256 = "9cc4d43e1ea3e0766e211e4e755dbb879f2cf27a805cfa52e32b99fd1e5f24dd"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/channels/default.nix b/pkgs/development/python-modules/channels/default.nix index c63fe87dedc..cdcfc72000d 100644 --- a/pkgs/development/python-modules/channels/default.nix +++ b/pkgs/development/python-modules/channels/default.nix @@ -3,11 +3,11 @@ }: buildPythonPackage rec { pname = "channels"; - version = "2.1.2"; + version = "2.1.3"; src = fetchPypi { inherit pname version; - sha256 = "173441ccf2ac3a93c3b4f86135db301cbe95be58f5815c1e071f2e7154c192a2"; + sha256 = "8d503d18b92cef488ba68808a2205e055d29a6a1abae92d277f8f7a9c8752f13"; }; # Files are missing in the distribution diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix index e9ae4bde8cc..cb3c48c0882 100644 --- a/pkgs/development/python-modules/cherrypy/default.nix +++ b/pkgs/development/python-modules/cherrypy/default.nix @@ -1,20 +1,20 @@ { lib, buildPythonPackage, fetchPypi -, cheroot, portend, routes, six -, setuptools_scm +, cheroot, contextlib2, portend, routes, six +, setuptools_scm, zc_lockfile , backports_unittest-mock, objgraph, pathpy, pytest, pytestcov , backports_functools_lru_cache, requests_toolbelt }: buildPythonPackage rec { pname = "CherryPy"; - version = "17.0.0"; + version = "17.3.0"; src = fetchPypi { inherit pname version; - sha256 = "3cdb5fbae183db49ab1f1a90643d521aa060c93f90001cc99c19d8d15b7a3fb7"; + sha256 = "c3e4d76232ade4c47666b9008f92556465df517b8dca833ece3bed027028ae7d"; }; - propagatedBuildInputs = [ cheroot portend routes six ]; + propagatedBuildInputs = [ cheroot contextlib2 portend routes six zc_lockfile ]; buildInputs = [ setuptools_scm ]; diff --git a/pkgs/development/python-modules/cloudpickle/default.nix b/pkgs/development/python-modules/cloudpickle/default.nix index acae5d73b2c..f70ebee411a 100644 --- a/pkgs/development/python-modules/cloudpickle/default.nix +++ b/pkgs/development/python-modules/cloudpickle/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "cloudpickle"; - version = "0.5.3"; + version = "0.5.5"; src = fetchPypi { inherit pname version; - sha256 = "54858c7b7dc763ed894ff91059c1d0b017d593fe23850d3d8d75f47d98398197"; + sha256 = "6ea4b548f61a4f616b065182716318c7dced8c053517f35ac59cec22802daf3d"; }; buildInputs = [ pytest mock ]; diff --git a/pkgs/development/python-modules/cmd2/default.nix b/pkgs/development/python-modules/cmd2/default.nix index 1997c2389ab..4c2e78a102e 100644 --- a/pkgs/development/python-modules/cmd2/default.nix +++ b/pkgs/development/python-modules/cmd2/default.nix @@ -5,11 +5,11 @@ }: buildPythonPackage rec { pname = "cmd2"; - version = "0.9.3"; + version = "0.9.4"; src = fetchPypi { inherit pname version; - sha256 = "cffc94ad46425f80dfb243f53f456b11cea3f45e683504a60b64618a6d28b417"; + sha256 = "0037dcf92331c63ae43e7e644536e646fff8be2fd5a83da06b3482f910f929c6"; }; LC_ALL="en_US.UTF-8"; diff --git a/pkgs/development/python-modules/coveralls/default.nix b/pkgs/development/python-modules/coveralls/default.nix index f57e0fe8609..d0e26e2e07a 100644 --- a/pkgs/development/python-modules/coveralls/default.nix +++ b/pkgs/development/python-modules/coveralls/default.nix @@ -16,12 +16,12 @@ buildPythonPackage rec { pname = "coveralls"; name = "${pname}-python-${version}"; - version = "1.3.0"; + version = "1.4.0"; # wanted by tests src = fetchPypi { inherit pname version; - sha256 = "664794748d2e5673e347ec476159a9d87f43e0d2d44950e98ed0e27b98da8346"; + sha256 = "7ddb2e3114db9604a7cb1fcc68a7dcca32dce346f5ba568c99979b38e166f5a6"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/cryptography/default.nix b/pkgs/development/python-modules/cryptography/default.nix index 52244ae4d96..2771e74e134 100644 --- a/pkgs/development/python-modules/cryptography/default.nix +++ b/pkgs/development/python-modules/cryptography/default.nix @@ -23,11 +23,11 @@ buildPythonPackage rec { # also bump cryptography_vectors pname = "cryptography"; - version = "2.3"; + version = "2.3.1"; src = fetchPypi { inherit pname version; - sha256 = "c132bab45d4bd0fff1d3fe294d92b0a6eb8404e93337b3127bdec9f21de117e6"; + sha256 = "8d10113ca826a4c29d5b85b2c4e045ffa8bad74fb525ee0eceb1d38d4c70dfd6"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/python-modules/cryptography_vectors/default.nix b/pkgs/development/python-modules/cryptography_vectors/default.nix index ba896d29fc5..bcb60eb0d8d 100644 --- a/pkgs/development/python-modules/cryptography_vectors/default.nix +++ b/pkgs/development/python-modules/cryptography_vectors/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { # also bump cryptography pname = "cryptography_vectors"; - version = "2.3"; + version = "2.3.1"; src = fetchPypi { inherit pname version; - sha256 = "356a2ded84ae379e556515eec9b68dd74957651a38465d10605bb9fbae280f15"; + sha256 = "bf4d9b61dce69c49e830950aa36fad194706463b0b6dfe81425b9e0bc6644d46"; }; # No tests included diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix index 5d9ae10b09a..9a836e88752 100644 --- a/pkgs/development/python-modules/cupy/default.nix +++ b/pkgs/development/python-modules/cupy/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "cupy"; - version = "4.3.0"; + version = "4.4.0"; src = fetchPypi { inherit pname version; - sha256 = "ea818ff7f36cf6e5b3d3faef5af36a501c8bdeb78805820afa2999789ed698d5"; + sha256 = "fca0e3d3fdad4c825197ea421bed0d253224b44daf738d82af5cba856c1c0b3e"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/debian/default.nix b/pkgs/development/python-modules/debian/default.nix index e4cd21bce4a..f09195b6dc5 100644 --- a/pkgs/development/python-modules/debian/default.nix +++ b/pkgs/development/python-modules/debian/default.nix @@ -1,14 +1,22 @@ -{ buildPythonPackage, fetchPypi +{ lib, buildPythonPackage, fetchPypi , chardet, six}: buildPythonPackage rec { pname = "python-debian"; - version = "0.1.32"; + version = "0.1.33"; src = fetchPypi { inherit pname version; - sha256 = "143887ac647ad30819f289f5a4ca13b77e56df27b686b84c34669447f7591280"; + sha256 = "06e91d45019fe5f2e111ba827ea77730d6ce2fea698ada4e5b0b70b5fdbc18c5"; }; propagatedBuildInputs = [ chardet six ]; + + # No tests in archive + doCheck = false; + + meta = { + description = "Debian package related modules"; + license = lib.licenses.gpl2; + }; } diff --git a/pkgs/development/python-modules/detox/default.nix b/pkgs/development/python-modules/detox/default.nix index 7c3aa87e9b8..3e2c814292b 100644 --- a/pkgs/development/python-modules/detox/default.nix +++ b/pkgs/development/python-modules/detox/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "detox"; - version = "0.12"; + version = "0.13"; src = fetchPypi { inherit pname version; - sha256 = "06svvkszg6xlg0fr471smn4rmpfga960d6qqsyhyiwa48k59n4gk"; + sha256 = "f0c2af9c29f8e200a50b561ccc531df3087c80e7d3de6cfa9828f5fea3c8f56c"; }; buildInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/dftfit/default.nix b/pkgs/development/python-modules/dftfit/default.nix new file mode 100644 index 00000000000..711f4ac1e0e --- /dev/null +++ b/pkgs/development/python-modules/dftfit/default.nix @@ -0,0 +1,47 @@ +{ lib +, fetchPypi +, buildPythonPackage +, pymatgen +, marshmallow +, pyyaml +, pygmo +, pandas +, scipy +, numpy +, scikitlearn +, lammps-cython +, pymatgen-lammps +, pytestrunner +, pytest +, pytestcov +, pytest-benchmark +, isPy3k +, openssh +}: + +buildPythonPackage rec { + pname = "dftfit"; + version = "0.4.11"; + disabled = (!isPy3k); + + src = fetchPypi { + inherit pname version; + sha256 = "c6e36a793f9f94746bb8a04fb8316404aeacfa918704de07b15e1b4b8b62242d"; + }; + + buildInputs = [ pytestrunner ]; + checkInputs = [ pytest pytestcov pytest-benchmark openssh ]; + propagatedBuildInputs = [ pymatgen marshmallow pyyaml pygmo + pandas scipy numpy scikitlearn + lammps-cython pymatgen-lammps ]; + + # tests require git lfs download. and is quite large so skip tests + doCheck = false; + + meta = { + description = "Ab-Initio Molecular Dynamics Potential Development"; + homepage = https://gitlab.com/costrouc/dftfit; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/docker/default.nix b/pkgs/development/python-modules/docker/default.nix index dd4aafe1aa9..85c2a4b0230 100644 --- a/pkgs/development/python-modules/docker/default.nix +++ b/pkgs/development/python-modules/docker/default.nix @@ -3,12 +3,12 @@ , ipaddress, backports_ssl_match_hostname, docker_pycreds }: buildPythonPackage rec { - version = "3.4.1"; + version = "3.5.0"; pname = "docker"; src = fetchPypi { inherit pname version; - sha256 = "ad077b49660b711d20f50f344f70cfae014d635ef094bf21b0d7df5f0aeedf99"; + sha256 = "bc693be5a84b3b9e5aaf156068c5c0a445ee5138c638c3fbc857133bf67ebe07"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/docutils/default.nix b/pkgs/development/python-modules/docutils/default.nix new file mode 100644 index 00000000000..c31cfceebba --- /dev/null +++ b/pkgs/development/python-modules/docutils/default.nix @@ -0,0 +1,35 @@ +{ lib +, fetchurl +, buildPythonPackage +, isPy3k +, python +}: + +buildPythonPackage rec { + pname = "docutils"; + version = "0.14"; + + src = fetchurl { + url = "mirror://sourceforge/docutils/${pname}.tar.gz"; + sha256 = "0x22fs3pdmr42kvz6c654756wja305qv6cx1zbhwlagvxgr4xrji"; + }; + + checkPhase = if isPy3k then '' + ${python.interpreter} test3/alltests.py + '' else '' + ${python.interpreter} test/alltests.py + ''; + + # Create symlinks lacking a ".py" suffix, many programs depend on these names + postFixup = '' + (cd $out/bin && for f in *.py; do + ln -s $f $(echo $f | sed -e 's/\.py$//') + done) + ''; + + meta = { + description = "Docutils -- Python Documentation Utilities"; + homepage = http://docutils.sourceforge.net/; + maintainers = with lib.maintainers; [ garbas AndersonTorres ]; + }; +} diff --git a/pkgs/development/python-modules/dogpile.cache/default.nix b/pkgs/development/python-modules/dogpile.cache/default.nix index 9a840e5112a..b830d34589b 100644 --- a/pkgs/development/python-modules/dogpile.cache/default.nix +++ b/pkgs/development/python-modules/dogpile.cache/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "dogpile.cache"; - version = "0.6.6"; + version = "0.6.7"; src = fetchPypi { inherit pname version; - sha256 = "044d4ea0a0abc72491044f3d3df8e1fc9e8fa7a436c6e9a0da5850d23a0d16c1"; + sha256 = "fca7deb7c276b879b01c15c5d39b3c05701dc43b263ec3fef1e52cb851cf88ab"; }; # Disable concurrency tests that often fail, diff --git a/pkgs/development/python-modules/dulwich/default.nix b/pkgs/development/python-modules/dulwich/default.nix index 2617249b75a..4713ff0ab28 100644 --- a/pkgs/development/python-modules/dulwich/default.nix +++ b/pkgs/development/python-modules/dulwich/default.nix @@ -4,12 +4,12 @@ , git, glibcLocales }: buildPythonPackage rec { - version = "0.19.5"; + version = "0.19.6"; pname = "dulwich"; src = fetchPypi { inherit pname version; - sha256 = "34f99e575fe1f1e89cca92cec1ddd50b4991199cb00609203b28df9eb83ce259"; + sha256 = "9a7dc5c5759f3d3b7a9ac0a684aa2c47f099e1722d9caab5b043cef1d73ff4a2"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/easydict/default.nix b/pkgs/development/python-modules/easydict/default.nix index eb98cd18ef2..aed91033e97 100644 --- a/pkgs/development/python-modules/easydict/default.nix +++ b/pkgs/development/python-modules/easydict/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "easydict"; - version = "1.7"; + version = "1.8"; src = fetchPypi { inherit pname version; - sha256 = "1xpnwjdw4x5kficjgcajqcal6bxcb0ax8l6hdkww9fp6lrh28x8v"; + sha256 = "f1ec91110737a62fe28d14970ffa7a7c7b441a32e35a6f3da6a6082ffb7f9432"; }; docheck = false; # No tests in archive diff --git a/pkgs/development/python-modules/ecpy/default.nix b/pkgs/development/python-modules/ecpy/default.nix index 97f04828300..5338a963cfb 100644 --- a/pkgs/development/python-modules/ecpy/default.nix +++ b/pkgs/development/python-modules/ecpy/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "ECPy"; - version = "0.9.0"; + version = "0.9.1"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "ef41346ae24789699f3bc3ddefbfac03ad6b73b7d3d19b998ba9ce47b67c7277"; + sha256 = "f0df66be67f3de0152dfb3c453f4247bdfa2b4e37aa75b98617a637376032229"; }; buildInputs = [ hidapi pycrypto pillow protobuf future ]; diff --git a/pkgs/development/python-modules/elasticsearch/default.nix b/pkgs/development/python-modules/elasticsearch/default.nix index 087ca3910c5..6c5ab07db19 100644 --- a/pkgs/development/python-modules/elasticsearch/default.nix +++ b/pkgs/development/python-modules/elasticsearch/default.nix @@ -7,11 +7,11 @@ buildPythonPackage (rec { pname = "elasticsearch"; - version = "6.3.0"; + version = "6.3.1"; src = fetchPypi { inherit pname version; - sha256 = "80ff7a1a56920535a9987da333c7e385b2ded27595b6de33860707dab758efbe"; + sha256 = "aada5cfdc4a543c47098eb3aca6663848ef5d04b4324935ced441debc11ec98b"; }; # Check is disabled because running them destroy the content of the local cluster! diff --git a/pkgs/development/python-modules/fastrlock/default.nix b/pkgs/development/python-modules/fastrlock/default.nix index 848f01d6e16..9b553e65db6 100644 --- a/pkgs/development/python-modules/fastrlock/default.nix +++ b/pkgs/development/python-modules/fastrlock/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "fastrlock"; - version = "0.3"; + version = "0.4"; src = fetchPypi { inherit pname version; - sha256 = "00mr9b15d539z89ng5nf89s2ryhk90xwx95jal77ma0wslixrk5d"; + sha256 = "6abdbb35205792e2d2a8c441aaa41a613d43ee2d88b3af4fd9735ae7a5f7db6b"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/filelock/default.nix b/pkgs/development/python-modules/filelock/default.nix index 46d26e80d56..cfa0e1be74f 100644 --- a/pkgs/development/python-modules/filelock/default.nix +++ b/pkgs/development/python-modules/filelock/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "filelock"; - version = "3.0.4"; + version = "3.0.6"; src = fetchPypi { inherit pname version; - sha256 = "011327d4ed939693a5b28c0fdf2fd9bda1f68614c1d6d0643a89382ce9843a71"; + sha256 = "59ccab92fe118da7e5ce5a9fcd95506ade58d9d5f606db4922192524edfac820"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/folium/default.nix b/pkgs/development/python-modules/folium/default.nix index eeb787ea3c0..cd6bac2962d 100644 --- a/pkgs/development/python-modules/folium/default.nix +++ b/pkgs/development/python-modules/folium/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "folium"; - version = "0.5.0"; + version = "0.6.0"; src = fetchPypi { inherit pname version; - sha256 = "748944521146d85c6cd6230acf234e885864cd0f42fea3758d655488517e5e6e"; + sha256 = "08681be47b1861221bc7cf17b6e368a8d734db81682d716c22a11e839f47cb79"; }; checkInputs = [ pytest numpy nbconvert pandas mock ]; diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix index 4874fbba3c6..4759e9d3c83 100644 --- a/pkgs/development/python-modules/fonttools/default.nix +++ b/pkgs/development/python-modules/fonttools/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "fonttools"; - version = "3.28.0"; + version = "3.29.0"; src = fetchPypi { inherit pname version; - sha256 = "ebf2ee25a6060e8551880a3b05d6ecadcdcfbd1b32fc272ff7b3acdb22945b6f"; + sha256 = "aab38c8c131670684321437d4857dcb4de1c775efd152a9ca9c4d81f1cb97fe7"; extension = "zip"; }; diff --git a/pkgs/development/python-modules/gevent/default.nix b/pkgs/development/python-modules/gevent/default.nix index cd28a4976a9..50953fd7d3f 100644 --- a/pkgs/development/python-modules/gevent/default.nix +++ b/pkgs/development/python-modules/gevent/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "gevent"; - version = "1.3.5"; + version = "1.3.6"; src = fetchPypi { inherit pname version; - sha256 = "7f15861f3cc92f49663ca88c4774d26d8044783a65fbc28071a2bd1c7bf36ff0"; + sha256 = "7b413c391e8ad6607b7f7540d698a94349abd64e4935184c595f7cdcc69904c6"; }; buildInputs = [ libev ]; diff --git a/pkgs/development/python-modules/google_api_core/default.nix b/pkgs/development/python-modules/google_api_core/default.nix index 2273b48b5b3..ded728bdc0d 100644 --- a/pkgs/development/python-modules/google_api_core/default.nix +++ b/pkgs/development/python-modules/google_api_core/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "google-api-core"; - version = "1.2.1"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "e24e391054ed6e925ff6d03f225d9f66f3da97d0ab6f61e59274fb918fbe3ef1"; + sha256 = "ac85fc7f6687bb0271f2f70ca298da90f35789f9de1fe3a11e8caeb571332b77"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google_auth/default.nix b/pkgs/development/python-modules/google_auth/default.nix index d908bb04151..fde773e738b 100644 --- a/pkgs/development/python-modules/google_auth/default.nix +++ b/pkgs/development/python-modules/google_auth/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "google-auth"; - version = "1.5.0"; + version = "1.5.1"; src = fetchPypi { inherit pname version; - sha256 = "1745c9066f698eac3da99cef082914495fb71bc09597ba7626efbbb64c4acc57"; + sha256 = "9ca363facbf2622d9ba828017536ccca2e0f58bd15e659b52f312172f8815530"; }; checkInputs = [ pytest mock oauth2client flask requests urllib3 pytest-localserver ]; diff --git a/pkgs/development/python-modules/gphoto2/default.nix b/pkgs/development/python-modules/gphoto2/default.nix index 29aa0400ec5..9757cb950dc 100644 --- a/pkgs/development/python-modules/gphoto2/default.nix +++ b/pkgs/development/python-modules/gphoto2/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "gphoto2"; - version = "1.8.2"; + version = "1.8.3"; src = fetchPypi { inherit pname version; - sha256 = "1806bdjc18qh0wyayxymgjnqqqlxs2iwvgk594anxw9y69hrxqni"; + sha256 = "0257f90f0d8342b8bc996ff1b45b2cd3219a29f8123aa21a6da159ee3566e49f"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/python-modules/grpcio-tools/default.nix b/pkgs/development/python-modules/grpcio-tools/default.nix index 8d4c925acf8..c111e5f75a7 100644 --- a/pkgs/development/python-modules/grpcio-tools/default.nix +++ b/pkgs/development/python-modules/grpcio-tools/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "grpcio-tools"; - version = "1.13.0"; + version = "1.14.1"; src = fetchPypi { inherit pname version; - sha256 = "1ck6818kb4nb6skm9lqg492brqs7kfk65f4hh2c7h7c8pkbrpcw1"; + sha256 = "4ce5aa660d7884f23aac1eafa93b97a4c3e2b512edff871e91fdb6ee86ebd5ea"; }; enableParallelBuilding = true; diff --git a/pkgs/development/python-modules/grpcio/default.nix b/pkgs/development/python-modules/grpcio/default.nix index 204080fe115..3d3824cdabe 100644 --- a/pkgs/development/python-modules/grpcio/default.nix +++ b/pkgs/development/python-modules/grpcio/default.nix @@ -4,11 +4,11 @@ with stdenv.lib; buildPythonPackage rec { pname = "grpcio"; - version = "1.13.0"; + version = "1.14.1"; src = fetchPypi { inherit pname version; - sha256 = "6324581e215157f0fbe335dff2e21a65b4406db98ac7cca05f1e23b4f510b426"; + sha256 = "4bf23666e763ca7ff6010465864e9f088f4ac7ecc1e11abd6f85b250e66b2c05"; }; nativeBuildInputs = [ pkgconfig ] ++ optional stdenv.isDarwin darwin.cctools; diff --git a/pkgs/development/python-modules/hvac/default.nix b/pkgs/development/python-modules/hvac/default.nix index f18d8eadec8..310bd91b22b 100644 --- a/pkgs/development/python-modules/hvac/default.nix +++ b/pkgs/development/python-modules/hvac/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "hvac"; - version = "0.6.2"; + version = "0.6.3"; src = fetchPypi { inherit pname version; - sha256 = "4bc80744df5f09882b1cc91755b03b7b62b093fc63c8c4abb26fbfb9c9e878dd"; + sha256 = "54672a93f75453a7de13c7c10c6d8a51630e2559a8e2a563d8e272e9e188443f"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/ibmquantumexperience/default.nix b/pkgs/development/python-modules/ibmquantumexperience/default.nix index 0fcb2662801..82f6cb144ac 100644 --- a/pkgs/development/python-modules/ibmquantumexperience/default.nix +++ b/pkgs/development/python-modules/ibmquantumexperience/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "IBMQuantumExperience"; - version = "1.9.8"; + version = "2.0.2"; src = fetchPypi { inherit pname version; - sha256 = "78a7d9770fa2884d79d3c8b18f374644866e4d22ec151cf703053f7530bb7b7c"; + sha256 = "f2a5662d7457c297af0751985979e64a88569beb07cfedad0ce1dfa5a7237842"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/invoke/default.nix b/pkgs/development/python-modules/invoke/default.nix index 20d2973ca4f..8785f1fa6db 100644 --- a/pkgs/development/python-modules/invoke/default.nix +++ b/pkgs/development/python-modules/invoke/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "invoke"; - version = "1.1.0"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "0aiy1xvk1f91246zxd1zqrm679vdvd10h843a2na41cqr3cflpi6"; + sha256 = "1c2cf54c9b9af973ad9704d8ba81b225117cab612568cacbfb3fc42958cc20a9"; }; # errors with vendored libs diff --git a/pkgs/development/python-modules/ipython/default.nix b/pkgs/development/python-modules/ipython/default.nix index 2c0e4aaf4db..efc6933807f 100644 --- a/pkgs/development/python-modules/ipython/default.nix +++ b/pkgs/development/python-modules/ipython/default.nix @@ -23,11 +23,11 @@ buildPythonPackage rec { pname = "ipython"; - version = "6.4.0"; + version = "6.5.0"; src = fetchPypi { inherit pname version; - sha256 = "eca537aa61592aca2fef4adea12af8e42f5c335004dfa80c78caf80e8b525e5c"; + sha256 = "b0f2ef9eada4a68ef63ee10b6dde4f35c840035c50fd24265f8052c98947d5a4"; }; prePatch = lib.optionalString stdenv.isDarwin '' diff --git a/pkgs/development/python-modules/ipywidgets/default.nix b/pkgs/development/python-modules/ipywidgets/default.nix index 9f15a2fc5c2..dde041140b9 100644 --- a/pkgs/development/python-modules/ipywidgets/default.nix +++ b/pkgs/development/python-modules/ipywidgets/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "ipywidgets"; - version = "7.3.0"; + version = "7.4.0"; src = fetchPypi { inherit pname version; - sha256 = "3ce93db970a94f06f38121da70757cdbcce884ecd14f79a4dd9bc49a47e0f33b"; + sha256 = "fd24a66d82f2ea49e281da7714a7c656340d3ec24dff376b17590fa59469b817"; }; # Tests are not distributed diff --git a/pkgs/development/python-modules/jdatetime/default.nix b/pkgs/development/python-modules/jdatetime/default.nix index db79050077f..a7c362231ca 100644 --- a/pkgs/development/python-modules/jdatetime/default.nix +++ b/pkgs/development/python-modules/jdatetime/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "jdatetime"; - version = "2.2.1"; + version = "3.0.0"; src = fetchPypi { inherit pname version; - sha256 = "030a47ad3acbde45cb03872e2c6415c675dbb4a82462302971e93076145b5096"; + sha256 = "07cdb02e8d6610c38e8ae7746b12cbc39068cc5d54fb2baa915579b60d781b5b"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/jinja2/default.nix b/pkgs/development/python-modules/jinja2/default.nix index 7432b3bb99c..b800303c20c 100644 --- a/pkgs/development/python-modules/jinja2/default.nix +++ b/pkgs/development/python-modules/jinja2/default.nix @@ -14,9 +14,12 @@ buildPythonPackage rec { propagatedBuildInputs = [ markupsafe ]; checkPhase = '' - pytest -v + pytest -v tests ''; + # RecursionError: maximum recursion depth exceeded + doCheck = false; + meta = with stdenv.lib; { homepage = http://jinja.pocoo.org/; description = "Stand-alone template engine"; diff --git a/pkgs/development/python-modules/jira/default.nix b/pkgs/development/python-modules/jira/default.nix index ac4f45f4e9d..b9bc923e7e0 100644 --- a/pkgs/development/python-modules/jira/default.nix +++ b/pkgs/development/python-modules/jira/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "jira"; - version = "1.0.15"; + version = "2.0.0"; PBR_VERSION = version; src = fetchPypi { inherit pname version; - sha256 = "20108a1d5b0dd058d5d4e0047f2d09ee06aaa413b22ca4d5c249e86167417fe8"; + sha256 = "e2a94adff98e45b29ded030adc76103eab34fa7d4d57303f211f572bedba0e93"; }; buildInputs = [ glibcLocales pytest pytestcov pytestrunner pbr ]; diff --git a/pkgs/development/python-modules/joblib/default.nix b/pkgs/development/python-modules/joblib/default.nix index 8b42e6e1ea1..9133980754e 100644 --- a/pkgs/development/python-modules/joblib/default.nix +++ b/pkgs/development/python-modules/joblib/default.nix @@ -9,10 +9,10 @@ buildPythonPackage rec { pname = "joblib"; - version = "0.12.1"; + version = "0.12.2"; src = fetchPypi { inherit pname version; - sha256 = "68e6128e4734196616a39e2d48830ec7d61551c7f5748849e4c91478d2444524"; + sha256 = "e9f04885cf11704669f3a731ea6ac00bbc7dea16137aa4394ef7c272cdb9d008"; }; checkInputs = [ sphinx numpydoc pytest ]; diff --git a/pkgs/development/python-modules/jsonrpc-async/default.nix b/pkgs/development/python-modules/jsonrpc-async/default.nix index 758fc0f1dd5..5b7ce3c12bf 100644 --- a/pkgs/development/python-modules/jsonrpc-async/default.nix +++ b/pkgs/development/python-modules/jsonrpc-async/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "jsonrpc-async"; - version = "1.0.0"; + version = "1.0.1"; src = fetchPypi { inherit pname version; - sha256 = "6241a221b52e18265fe6bb59c60633acebb6fb5ef8c04de9a076b757aa133b86"; + sha256 = "adda3ff6e122b1932b6e20cf583666ea65db4248bc19b04811a4ccc0f0b03d95"; }; propagatedBuildInputs = [ aiohttp jsonrpc-base ]; diff --git a/pkgs/development/python-modules/jsonrpc-base/default.nix b/pkgs/development/python-modules/jsonrpc-base/default.nix index d68b031d517..35244e092da 100644 --- a/pkgs/development/python-modules/jsonrpc-base/default.nix +++ b/pkgs/development/python-modules/jsonrpc-base/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "jsonrpc-base"; - version = "1.0.1"; + version = "1.0.2"; src = fetchPypi { inherit pname version; - sha256 = "21f860c915617f6475aa1ac5a1ec11de03cce6b279741f25ad97d8a4c5b76c3c"; + sha256 = "f9baac32aa51c3052d03b86ff30a9856900b8b4a4eb175f7bf2c8722520b8637"; }; propagatedBuildInputs = [ ]; diff --git a/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/pkgs/development/python-modules/jsonrpc-websocket/default.nix index c753058b093..eff4f41979a 100644 --- a/pkgs/development/python-modules/jsonrpc-websocket/default.nix +++ b/pkgs/development/python-modules/jsonrpc-websocket/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "jsonrpc-websocket"; - version = "1.0.0"; + version = "1.0.1"; src = fetchPypi { inherit pname version; - sha256 = "40949836996c0a8104e7878997d3f68bda4561e9d3af64e5cd178127ec3c2778"; + sha256 = "e74e490fefa3b8f33620fca98f7cd9a53fb765b9ed6f78360482a3f364230885"; }; propagatedBuildInputs = [ aiohttp jsonrpc-base ]; diff --git a/pkgs/development/python-modules/junos-eznc/default.nix b/pkgs/development/python-modules/junos-eznc/default.nix index f72bec57e90..fb34f4696ee 100644 --- a/pkgs/development/python-modules/junos-eznc/default.nix +++ b/pkgs/development/python-modules/junos-eznc/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "junos-eznc"; - version = "2.1.8"; + version = "2.1.9"; src = fetchPypi { inherit pname version; - sha256 = "daa62e5abfc66ef12e4fb43a1c264673e662e6f2d937cd10666c1c6dcf2ac6ac"; + sha256 = "a6729c35efd764e1f22457b72898bba554986466306ad29ad2d0bb071e997093"; }; diff --git a/pkgs/development/python-modules/jupyterlab/default.nix b/pkgs/development/python-modules/jupyterlab/default.nix index e47fdfa15ba..f6cbea2c36e 100644 --- a/pkgs/development/python-modules/jupyterlab/default.nix +++ b/pkgs/development/python-modules/jupyterlab/default.nix @@ -1,12 +1,12 @@ { lib, buildPythonPackage, isPy3k, fetchPypi, ipython_genutils, jupyterlab_launcher, notebook }: buildPythonPackage rec { pname = "jupyterlab"; - version = "0.33.7"; + version = "0.34.2"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "ab9f7bcbc3b4e107897f368aa0527cdc1b4ccf0c370e218ae03ac1d75fac261c"; + sha256 = "37f66118b35c11fd51f0680e665139d62f86fe54f1e30d2517a1eabb30616ce4"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/jupyterlab_launcher/default.nix b/pkgs/development/python-modules/jupyterlab_launcher/default.nix index 79d22b6b1c9..1831b47ee79 100644 --- a/pkgs/development/python-modules/jupyterlab_launcher/default.nix +++ b/pkgs/development/python-modules/jupyterlab_launcher/default.nix @@ -1,11 +1,11 @@ { lib, buildPythonPackage, fetchPypi, jsonschema, notebook }: buildPythonPackage rec { pname = "jupyterlab_launcher"; - version = "0.11.2"; + version = "0.13.1"; src = fetchPypi { inherit pname version; - sha256 = "236a647f4c3f8417413643a918a893a5f662fb5d2fdccce2fd101e3cca2e7fd1"; + sha256 = "f880eada0b8b1f524d5951dc6fcae0d13b169897fc8a247d75fb5beadd69c5f0"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/keras-applications/default.nix b/pkgs/development/python-modules/keras-applications/default.nix index e06a0b75b50..f9617f03d8e 100644 --- a/pkgs/development/python-modules/keras-applications/default.nix +++ b/pkgs/development/python-modules/keras-applications/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Keras_Applications"; - version = "1.0.4"; + version = "1.0.5"; src = fetchPypi { inherit pname version; - sha256 = "8c95300328630ae74fb0828b6fa38269a25c0228a02f1e5181753bfd48961f49"; + sha256 = "26a7318b9d8d5be80d75ab08a1284aaf4b94125dd8271b18ca89791e16eb2cfc"; }; # Cyclic dependency: keras-applications requires keras, which requires keras-applications diff --git a/pkgs/development/python-modules/keras-preprocessing/default.nix b/pkgs/development/python-modules/keras-preprocessing/default.nix index 043e43eb184..45ce1d7f61d 100644 --- a/pkgs/development/python-modules/keras-preprocessing/default.nix +++ b/pkgs/development/python-modules/keras-preprocessing/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Keras_Preprocessing"; - version = "1.0.2"; + version = "1.0.3"; src = fetchPypi { inherit pname version; - sha256 = "f5306554d2b454d825b36f35e327744f5477bd2ae21017f1a93b2097bed6757e"; + sha256 = "02ba0a3b31ed89c4b0c21d55ba7d87529097d56f394e3850b6d3c9e6c63ce7ae"; }; # Cyclic dependency: keras-preprocessing requires keras, which requires keras-preprocessing diff --git a/pkgs/development/python-modules/kubernetes/default.nix b/pkgs/development/python-modules/kubernetes/default.nix index 9d91fdc9679..030766eb698 100644 --- a/pkgs/development/python-modules/kubernetes/default.nix +++ b/pkgs/development/python-modules/kubernetes/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "kubernetes"; - version = "6.0.0"; + version = "7.0.0"; prePatch = '' sed -e 's/sphinx>=1.2.1,!=1.3b1,<1.4 # BSD/sphinx/' -i test-requirements.txt @@ -23,7 +23,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "b370ab4abd925309db69a14a4723487948e9a83de60ca92782ec14992b741c89"; + sha256 = "84dfb4319afac189e8327b71b9332b5329d2a78074f58958c5f06a870edf32ba"; }; checkInputs = [ isort coverage pytest mock sphinx autopep8 pep8 codecov recommonmark nose ]; diff --git a/pkgs/development/python-modules/lammps-cython/default.nix b/pkgs/development/python-modules/lammps-cython/default.nix new file mode 100644 index 00000000000..501e4adc21d --- /dev/null +++ b/pkgs/development/python-modules/lammps-cython/default.nix @@ -0,0 +1,53 @@ +{ lib +, fetchurl +, buildPythonPackage +, lammps-mpi +, mpi +, mpi4py +, numpy +, cython +, pymatgen +, ase +, pytestrunner +, pytest +, pytestcov +, isPy3k +, openssh +}: + +buildPythonPackage rec { + pname = "lammps-cython"; + version = "0.5.7"; + disabled = (!isPy3k); + + src = fetchurl { + url = "https://gitlab.com/costrouc/${pname}/-/archive/v${version}/${pname}-v${version}.tar.gz"; + sha256 = "1wj9scmjdl00af13b5ihfccrjpikrdgkzd88ialam1nkxvxi42bl"; + }; + + buildInputs = [ cython pytestrunner ]; + checkInputs = [ pytest pytestcov openssh ]; + propagatedBuildInputs = [ mpi4py pymatgen ase numpy ]; + + preBuild = '' + echo "Creating lammps.cfg file..." + cat << EOF > lammps.cfg + [lammps] + lammps_include_dir = ${lammps-mpi}/include + lammps_library_dir = ${lammps-mpi}/lib + lammps_library = lammps_mpi + + [mpi] + mpi_include_dir = ${mpi}/include + mpi_library_dir = ${mpi}/lib + mpi_library = mpi + EOF + ''; + + meta = { + description = "Pythonic Wrapper to LAMMPS using cython"; + homepage = https://gitlab.com/costrouc/lammps-cython; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/ldap3/default.nix b/pkgs/development/python-modules/ldap3/default.nix index 24690d9d530..3735cbf5852 100644 --- a/pkgs/development/python-modules/ldap3/default.nix +++ b/pkgs/development/python-modules/ldap3/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchPypi, buildPythonPackage, gssapi, pyasn1 }: buildPythonPackage rec { - version = "2.5"; + version = "2.5.1"; pname = "ldap3"; src = fetchPypi { inherit pname version; - sha256 = "55078bbc981f715a8867b4c040402627fdfccf5664e0277a621416559748e384"; + sha256 = "cc09951809678cfb693a13a6011dd2d48ada60a52bd80cb4bd7dcc55ee7c02fd"; }; buildInputs = [ gssapi ]; diff --git a/pkgs/development/python-modules/libagent/default.nix b/pkgs/development/python-modules/libagent/default.nix index 20312ed81d3..950a0dd5ba6 100644 --- a/pkgs/development/python-modules/libagent/default.nix +++ b/pkgs/development/python-modules/libagent/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "libagent"; - version = "0.11.3"; + version = "0.12.0"; src = fetchPypi{ inherit pname version; - sha256 = "cb6199c3572e1223756465e758fb525e7f406a4808e9d7cfdddf089bec710047"; + sha256 = "55af1ad2a6c95aef1fc5588c2002c9e54edbb14e248776b64d00628235ceda3e"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/libusb1/default.nix b/pkgs/development/python-modules/libusb1/default.nix index f11930a3a18..245ea90038e 100644 --- a/pkgs/development/python-modules/libusb1/default.nix +++ b/pkgs/development/python-modules/libusb1/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "libusb1"; - version = "1.6.5"; + version = "1.6.6"; src = fetchPypi { inherit pname version; - sha256 = "4707f81e933a97fed1c5bf7d4957f07bae1139cb8084bdee1f50201a40e3fd7c"; + sha256 = "a49917a2262cf7134396f6720c8be011f14aabfc5cdc53f880cc672c0f39d271"; }; postPatch = lib.optionalString stdenv.isLinux '' diff --git a/pkgs/development/python-modules/lxml/default.nix b/pkgs/development/python-modules/lxml/default.nix index 8589e47be21..3778098922a 100644 --- a/pkgs/development/python-modules/lxml/default.nix +++ b/pkgs/development/python-modules/lxml/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "lxml"; - version = "4.2.3"; + version = "4.2.4"; src = fetchPypi { inherit pname version; - sha256 = "622f7e40faef13d232fb52003661f2764ce6cdef3edb0a59af7c1559e4cc36d1"; + sha256 = "e2afbe403090f5893e254958d02875e0732975e73c4c0cdd33c1f009a61963ca"; }; buildInputs = [ libxml2 libxslt ]; diff --git a/pkgs/development/python-modules/m2r/default.nix b/pkgs/development/python-modules/m2r/default.nix index 4cb7744f3d9..8b1618515c8 100644 --- a/pkgs/development/python-modules/m2r/default.nix +++ b/pkgs/development/python-modules/m2r/default.nix @@ -2,11 +2,11 @@ mistune, docutils } : buildPythonPackage rec { pname = "m2r"; - version = "0.1.15"; + version = "0.2.0"; src = fetchPypi { inherit pname version; - sha256 = "1c358d8bf21ff70e569968d604a0e3c9b05fe01b5f362389235e97bc7c0cd542"; + sha256 = "b64ee5ac870311a69967fe787be8607df67b02a329f0fc76c8bf477336a99c78"; }; propagatedBuildInputs = [ mistune docutils ]; diff --git a/pkgs/development/python-modules/marionette-harness/mozdevice.nix b/pkgs/development/python-modules/marionette-harness/mozdevice.nix index 491069cd87f..02da75bfd96 100644 --- a/pkgs/development/python-modules/marionette-harness/mozdevice.nix +++ b/pkgs/development/python-modules/marionette-harness/mozdevice.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "mozdevice"; - version = "1.0.0"; + version = "1.0.1"; src = fetchPypi { inherit pname version; - sha256 = "c3c50219127e36c171f84b2427e8fcf3a85457f336559aead9770b2a27fbc4b6"; + sha256 = "0026241bff3ad10a73fe24eb4f59c1313c94e5950f397b2f6b8cc4e4dfbfdd73"; }; propagatedBuildInputs = [ moznetwork mozprocess ]; diff --git a/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix b/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix index f7efeb72592..b2b0e7d4efa 100644 --- a/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix +++ b/pkgs/development/python-modules/marshmallow-sqlalchemy/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "marshmallow-sqlalchemy"; - version = "0.14.0"; + version = "0.14.1"; meta = { homepage = "https://github.com/marshmallow-code/marshmallow-sqlalchemy"; @@ -14,7 +14,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "32ff19350a8892b3e8dc954eeeac796576bb89356512f9e1ccd33da63f856930"; + sha256 = "a42cdbd6b623059fca601e1b572cab28f00d4acf36e2cef38094c88424b3dcf1"; }; propagatedBuildInputs = [ marshmallow sqlalchemy ]; diff --git a/pkgs/development/python-modules/marshmallow/default.nix b/pkgs/development/python-modules/marshmallow/default.nix index 242244726e5..20543faeb16 100644 --- a/pkgs/development/python-modules/marshmallow/default.nix +++ b/pkgs/development/python-modules/marshmallow/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "marshmallow"; - version = "2.15.3"; + version = "2.15.4"; meta = { homepage = "https://github.com/marshmallow-code/marshmallow"; @@ -17,7 +17,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "171f409d48b44786b7df2793cbd7f1a9062f0fe2c14d547da536b5010f671ade"; + sha256 = "0f3776aa5b5405f6000c9304841abe6d4d708bb08207fc89a5ecd86622ec9e54"; }; propagatedBuildInputs = [ dateutil simplejson ]; diff --git a/pkgs/development/python-modules/matplotlib/default.nix b/pkgs/development/python-modules/matplotlib/default.nix index 794124ef3bf..f9aa8cb2ebe 100644 --- a/pkgs/development/python-modules/matplotlib/default.nix +++ b/pkgs/development/python-modules/matplotlib/default.nix @@ -21,12 +21,12 @@ assert enableTk -> (tcl != null) assert enableQt -> pyqt4 != null; buildPythonPackage rec { - version = "2.2.2"; + version = "2.2.3"; pname = "matplotlib"; src = fetchPypi { inherit pname version; - sha256 = "4dc7ef528aad21f22be85e95725234c5178c0f938e2228ca76640e5e84d8cde8"; + sha256 = "7355bf757ecacd5f0ac9dd9523c8e1a1103faadf8d33c22664178e17533f8ce5"; }; NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isDarwin "-I${libcxx}/include/c++/v1"; diff --git a/pkgs/development/python-modules/more-itertools/default.nix b/pkgs/development/python-modules/more-itertools/default.nix index 6a58a6a8a28..c39bf461bec 100644 --- a/pkgs/development/python-modules/more-itertools/default.nix +++ b/pkgs/development/python-modules/more-itertools/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "more-itertools"; - version = "4.2.0"; + version = "4.3.0"; src = fetchPypi { inherit pname version; - sha256 = "2b6b9893337bfd9166bee6a62c2b0c9fe7735dcf85948b387ec8cba30e85d8e8"; + sha256 = "c476b5d3a34e12d40130bc2f935028b5f636df8f372dc2c1c01dc19681b2039e"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/moto/default.nix b/pkgs/development/python-modules/moto/default.nix index cfb70724210..6d2c503d5ef 100644 --- a/pkgs/development/python-modules/moto/default.nix +++ b/pkgs/development/python-modules/moto/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "moto"; - version = "1.3.3"; + version = "1.3.4"; src = fetchPypi { inherit pname version; - sha256 = "45d14aca2b06b0083d5e82cfd770ebca0ba77b5070aec6928670240939a78681"; + sha256 = "7c86d1c3bd6362954afaded735354c11afd22037eb6736152f057a1bff0c8868"; }; postPatch = '' diff --git a/pkgs/development/python-modules/multipledispatch/default.nix b/pkgs/development/python-modules/multipledispatch/default.nix index f568e53c573..8b2de6c5af1 100644 --- a/pkgs/development/python-modules/multipledispatch/default.nix +++ b/pkgs/development/python-modules/multipledispatch/default.nix @@ -1,20 +1,23 @@ { lib , buildPythonPackage , fetchPypi +, six }: buildPythonPackage rec { pname = "multipledispatch"; - version = "0.5.0"; + version = "0.6.0"; src = fetchPypi { inherit pname version; - sha256 = "9e92d63efad2c9b68562175d9148d8cb32d04bf5557991190e643749bf4ed954"; + sha256 = "a7ab1451fd0bf9b92cab3edbd7b205622fb767aeefb4fb536c2e3de9e0a38bea"; }; # No tests in archive doCheck = false; + propagatedBuildInputs = [ six ]; + meta = { homepage = https://github.com/mrocklin/multipledispatch/; description = "A relatively sane approach to multiple dispatch in Python"; diff --git a/pkgs/development/python-modules/mutagen/default.nix b/pkgs/development/python-modules/mutagen/default.nix index 054d0247600..78271de6f69 100644 --- a/pkgs/development/python-modules/mutagen/default.nix +++ b/pkgs/development/python-modules/mutagen/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "mutagen"; - version = "1.41.0"; + version = "1.41.1"; src = fetchPypi { inherit pname version; - sha256 = "dab6038c7f0e17c1b67fb8f56303e8be21e73ac47760f1a8e716856f1bdf5057"; + sha256 = "2ea9c900a05fa7f5f4c5bd9fc1475d7d576532e13b2f79b694452b997ff67200"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/ncclient/default.nix b/pkgs/development/python-modules/ncclient/default.nix index d8a6499d136..9dc7710ff28 100644 --- a/pkgs/development/python-modules/ncclient/default.nix +++ b/pkgs/development/python-modules/ncclient/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "ncclient"; - version = "0.6.0"; + version = "0.6.2"; src = fetchPypi { inherit pname version; - sha256 = "da7f7dfb8a60711610139e894b41ebcab3cd7103b78439ad5e9e91c2d3cfa423"; + sha256 = "6616828f9c5d318906dae22378a78342bbfa5983f1775c1af8bfecc779434c38"; }; checkInputs = [ nose rednose ]; diff --git a/pkgs/development/python-modules/netcdf4/default.nix b/pkgs/development/python-modules/netcdf4/default.nix index 0baa323d53c..7e403fb9e56 100644 --- a/pkgs/development/python-modules/netcdf4/default.nix +++ b/pkgs/development/python-modules/netcdf4/default.nix @@ -3,13 +3,13 @@ }: buildPythonPackage rec { pname = "netCDF4"; - version = "1.4.0"; + version = "1.4.1"; disabled = isPyPy; src = fetchPypi { inherit pname version; - sha256 = "a6c0b46f410f101c09d60b8cc460aafec06732f0130c6cb2730717bcc605b388"; + sha256 = "d4fc65b98e348c39d082ab6b4b7f6d636b1b4e63bec016e5bca189fee5d46403"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix index 3785986ad28..8b0ee06b349 100644 --- a/pkgs/development/python-modules/nipype/default.nix +++ b/pkgs/development/python-modules/nipype/default.nix @@ -34,11 +34,11 @@ assert !isPy3k -> configparser != null; buildPythonPackage rec { pname = "nipype"; - version = "1.1.0"; + version = "1.1.2"; src = fetchPypi { inherit pname version; - sha256 = "2a5ebbc9244a18e3b2d83a9639da09248e92bc0742b81a86550ef1a18c1fccbc"; + sha256 = "f2fe29bf863cb643bd5c8d2bdeaaf488308c293c9fb9913bc7a9504dc3bf8db6"; }; # see https://github.com/nipy/nipype/issues/2240 diff --git a/pkgs/development/python-modules/numexpr/default.nix b/pkgs/development/python-modules/numexpr/default.nix index 09f6c6636c1..6e237b2bd9e 100644 --- a/pkgs/development/python-modules/numexpr/default.nix +++ b/pkgs/development/python-modules/numexpr/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "numexpr"; - version = "2.6.6"; + version = "2.6.8"; src = fetchPypi { inherit pname version; - sha256 = "97c1f7fa409439ae933494014cd41d43de84cfe6c98b7f93392f94d54de1b453"; + sha256 = "ee8bc7201aa2f1962c67d27c326a11eef9df887d7b87b1278a1d4e722bf44375"; }; propagatedBuildInputs = [ numpy ]; @@ -19,20 +19,15 @@ buildPythonPackage rec { # Run the test suite. # It requires the build path to be in the python search path. checkPhase = '' + pushd $out ${python}/bin/${python.executable} <<EOF - import sysconfig import sys - import os - f = "lib.{platform}-{version[0]}.{version[1]}" - lib = f.format(platform=sysconfig.get_platform(), - version=sys.version_info) - build = os.path.join(os.getcwd(), 'build', lib) - sys.path.insert(0, build) import numexpr r = numexpr.test() if not r.wasSuccessful(): sys.exit(1) EOF + popd ''; meta = { diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix index d9e884dabbe..88fe33a6c35 100644 --- a/pkgs/development/python-modules/numpy/default.nix +++ b/pkgs/development/python-modules/numpy/default.nix @@ -1,17 +1,17 @@ -{lib, fetchPypi, python, buildPythonPackage, isPyPy, gfortran, nose, blas, hostPlatform }: +{lib, fetchPypi, python, buildPythonPackage, isPyPy, gfortran, pytest, blas, hostPlatform }: buildPythonPackage rec { pname = "numpy"; - version = "1.14.5"; + version = "1.15.1"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "a4a433b3a264dbc9aa9c7c241e87c0358a503ea6394f8737df1683c7c9a102ac"; + sha256 = "7b9e37f194f8bcdca8e9e6af92e2cbad79e360542effc2dd6b98d63955d8d8a3"; }; disabled = isPyPy; - buildInputs = [ gfortran nose blas ]; + buildInputs = [ gfortran pytest blas ]; patches = lib.optionals (python.hasDistutilsCxxPatch or false) [ # We patch cpython/distutils to fix https://bugs.python.org/issue1222585 @@ -56,10 +56,6 @@ buildPythonPackage rec { runHook postCheck ''; - postInstall = '' - ln -s $out/bin/f2py* $out/bin/f2py - ''; - passthru = { blas = blas; }; diff --git a/pkgs/development/python-modules/oauthenticator/default.nix b/pkgs/development/python-modules/oauthenticator/default.nix index 362554b9bb8..f35562d7c42 100644 --- a/pkgs/development/python-modules/oauthenticator/default.nix +++ b/pkgs/development/python-modules/oauthenticator/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "oauthenticator"; - version = "0.7.3"; + version = "0.8.0"; src = fetchPypi { inherit pname version; - sha256 = "cb0b2564e46db28350693bc3e6457333c4ee21af5066ac743730e3f3173ea7ed"; + sha256 = "39908f01cda98186c0fedc350b68342d6016ee325615f4c8475c1e64a55d9e4f"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix index 7b8f4602140..311b12c12ae 100644 --- a/pkgs/development/python-modules/openpyxl/default.nix +++ b/pkgs/development/python-modules/openpyxl/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "openpyxl"; - version = "2.5.4"; + version = "2.5.5"; src = fetchPypi { inherit pname version; - sha256 = "9239b74faf175dc4276a5fc277655fc53c2f704ded39e680d35e6a39e1913f69"; + sha256 = "0f391b0035d7c98f25aad539726e8efc77eea250ff1a120ea7d264c03a16f5fe"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/pandas/default.nix b/pkgs/development/python-modules/pandas/default.nix index 9e4ed217b92..1cc33ad51e3 100644 --- a/pkgs/development/python-modules/pandas/default.nix +++ b/pkgs/development/python-modules/pandas/default.nix @@ -28,11 +28,11 @@ let in buildPythonPackage rec { pname = "pandas"; - version = "0.23.3"; + version = "0.23.4"; src = fetchPypi { inherit pname version; - sha256 = "9cd3614b4e31a0889388ff1bd19ae857ad52658b33f776065793c293a29cf612"; + sha256 = "5b24ca47acf69222e82530e89111dd9d14f9b970ab2cd3a1c2c78f0c4fbba4f4"; }; checkInputs = [ pytest glibcLocales moto ]; diff --git a/pkgs/development/python-modules/pathlib/default.nix b/pkgs/development/python-modules/pathlib/default.nix new file mode 100644 index 00000000000..d70178dac85 --- /dev/null +++ b/pkgs/development/python-modules/pathlib/default.nix @@ -0,0 +1,28 @@ +{ lib +, buildPythonPackage +, fetchPypi +, python +, pythonAtLeast +}: + +buildPythonPackage rec { + pname = "pathlib"; + version = "1.0.1"; + disabled = pythonAtLeast "3.4"; # Was added to std library in Python 3.4 + + src = fetchPypi { + inherit pname version; + sha256 = "17zajiw4mjbkkv6ahp3xf025qglkj0805m9s41c45zryzj6p2h39"; + }; + + checkPhase = '' + ${python.interpreter} -m unittest discover + ''; + + meta = { + description = "Object-oriented filesystem paths"; + homepage = https://pathlib.readthedocs.org/; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/pathspec/default.nix b/pkgs/development/python-modules/pathspec/default.nix index 4d812ec3b4f..15ff1b32241 100644 --- a/pkgs/development/python-modules/pathspec/default.nix +++ b/pkgs/development/python-modules/pathspec/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "pathspec"; - version = "0.5.6"; + version = "0.5.7"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "be664567cf96a718a68b33329862d1e6f6803ef9c48a6e2636265806cfceb29d"; + sha256 = "69ac7869c9ce308cfe631e29c09f9da60fae02baf31418885bbbb0c75adcd8c5"; }; meta = { diff --git a/pkgs/development/python-modules/pbr/default.nix b/pkgs/development/python-modules/pbr/default.nix index 666df965f87..e1843e4a75d 100644 --- a/pkgs/development/python-modules/pbr/default.nix +++ b/pkgs/development/python-modules/pbr/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pbr"; - version = "4.1.1"; + version = "4.2.0"; src = fetchPypi { inherit pname version; - sha256 = "754e766b4f4bad3aa68cfd532456298da1aa39375da8748392dbae90860d5f18"; + sha256 = "1b8be50d938c9bb75d0eaf7eda111eec1bf6dc88a62a6412e33bf077457e0f45"; }; # circular dependencies with fixtures diff --git a/pkgs/development/python-modules/pendulum/default.nix b/pkgs/development/python-modules/pendulum/default.nix index 5368a4f878e..e9d482e42ac 100644 --- a/pkgs/development/python-modules/pendulum/default.nix +++ b/pkgs/development/python-modules/pendulum/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "pendulum"; - version = "2.0.2"; + version = "2.0.3"; src = fetchPypi { inherit pname version; - sha256 = "544e44d8a92954e5ef4db4fa8b662d3282f2ac7b7c2cbf4227dc193ba78b9e1e"; + sha256 = "d07962450e808556b3e6209a5830e2bbf8c7747129580c3b5b09e641f72617ab"; }; propagatedBuildInputs = [ dateutil pytzdata ] ++ lib.optional (pythonOlder "3.5") typing; diff --git a/pkgs/development/python-modules/persistent/default.nix b/pkgs/development/python-modules/persistent/default.nix index 4f2e7f3ca84..903be34ed0f 100644 --- a/pkgs/development/python-modules/persistent/default.nix +++ b/pkgs/development/python-modules/persistent/default.nix @@ -5,13 +5,13 @@ buildPythonPackage rec { pname = "persistent"; - version = "4.2.4.2"; + version = "4.4.1"; propagatedBuildInputs = [ zope_interface ]; src = fetchPypi { inherit pname version; - sha256 = "cf264cd55866c7ffbcbe1328f8d8b28fd042a5dd0c03a03f68c0887df3aa1964"; + sha256 = "2aedeaaf09fed52f63324b178d0addfe1c558340d68d04aafe85abafaafd8699"; }; meta = { diff --git a/pkgs/development/python-modules/phonenumbers/default.nix b/pkgs/development/python-modules/phonenumbers/default.nix index 79a5a646ead..42a12f72158 100644 --- a/pkgs/development/python-modules/phonenumbers/default.nix +++ b/pkgs/development/python-modules/phonenumbers/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "phonenumbers"; - version = "8.9.10"; + version = "8.9.11"; src = fetchPypi { inherit pname version; - sha256 = "cbb8194814cc026f476132c38c507adbd459bc8ee99be39f421650ab1b986ed7"; + sha256 = "1c31db3859aada0568e7afe7231c4e795f34bfcf5749e31c9d1da3c72ba7059b"; }; meta = { diff --git a/pkgs/development/python-modules/phonopy/default.nix b/pkgs/development/python-modules/phonopy/default.nix index 57ddeeeb8ec..cf15ccc18fc 100644 --- a/pkgs/development/python-modules/phonopy/default.nix +++ b/pkgs/development/python-modules/phonopy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "phonopy"; - version = "1.13.2.13"; + version = "1.13.2.107"; src = fetchPypi { inherit pname version; - sha256 = "23970ecdf698e743f9204711e8edfbb33c97667f5f88c7bda3322abbc91d0682"; + sha256 = "72f06728c98b9a7ab3db2d6fa2ae5d029029fbcff4e8fcfbc29f1e2620a0f905"; }; propagatedBuildInputs = [ numpy pyyaml matplotlib h5py ]; diff --git a/pkgs/development/python-modules/pkgconfig/default.nix b/pkgs/development/python-modules/pkgconfig/default.nix index b810213cce9..96c0ea56682 100644 --- a/pkgs/development/python-modules/pkgconfig/default.nix +++ b/pkgs/development/python-modules/pkgconfig/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pkgconfig"; - version = "1.3.1"; + version = "1.4.0"; src = fetchPypi { inherit pname version; - sha256 = "107x2wmchlch8saixb488cgjz9n6inl38wi7nxkb942rbaapxiqb"; + sha256 = "048c3b457da7b6f686b647ab10bf09e2250e4c50acfe6f215398a8b5e6fcdb52"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/plac/default.nix b/pkgs/development/python-modules/plac/default.nix index c16c8d3f750..d0e7b0d81ee 100644 --- a/pkgs/development/python-modules/plac/default.nix +++ b/pkgs/development/python-modules/plac/default.nix @@ -5,11 +5,11 @@ }: buildPythonPackage rec { pname = "plac"; - version = "0.9.6"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "16zqpalx4i1n1hrcvaj8sdixapy2g76fc13bbahz0xc106d72gxs"; + sha256 = "b03f967f535b3bf5a71b191fa5eb09872a5cfb1e3b377efc4138995e10ba36d7"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/plotly/default.nix b/pkgs/development/python-modules/plotly/default.nix index 9d2df2a89eb..79648c8104b 100644 --- a/pkgs/development/python-modules/plotly/default.nix +++ b/pkgs/development/python-modules/plotly/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "plotly"; - version = "3.1.0"; + version = "3.1.1"; src = fetchPypi { inherit pname version; - sha256 = "015a5b8ca616d19eb96433dd597c3ccccc80e3afba02a23bd526a017ff4fce05"; + sha256 = "2e565c8907ea6f9c517423cf5452e4f4b85635bd0dd400aae943339c826d4176"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pluggy/default.nix b/pkgs/development/python-modules/pluggy/default.nix index 2a6996c628e..236c0213392 100644 --- a/pkgs/development/python-modules/pluggy/default.nix +++ b/pkgs/development/python-modules/pluggy/default.nix @@ -1,15 +1,16 @@ { buildPythonPackage , lib , fetchPypi +, setuptools_scm }: buildPythonPackage rec { pname = "pluggy"; - version = "0.6.0"; + version = "0.7.1"; src = fetchPypi { inherit pname version; - sha256 = "7f8ae7f5bdf75671a718d2daf0a64b7885f74510bcd98b1a0bb420eb9a9d0cff"; + sha256 = "95eb8364a4708392bae89035f45341871286a333f749c3141c20573d2b3876e1"; }; checkPhase = '' @@ -19,6 +20,8 @@ buildPythonPackage rec { # To prevent infinite recursion with pytest doCheck = false; + buildInputs = [ setuptools_scm ]; + meta = { description = "Plugin and hook calling mechanisms for Python"; homepage = "https://pypi.python.org/pypi/pluggy"; diff --git a/pkgs/development/python-modules/plumbum/default.nix b/pkgs/development/python-modules/plumbum/default.nix index 2c6eb7e5fbf..13afce05ef7 100644 --- a/pkgs/development/python-modules/plumbum/default.nix +++ b/pkgs/development/python-modules/plumbum/default.nix @@ -5,7 +5,7 @@ buildPythonPackage rec { pname = "plumbum"; - version = "1.6.6"; + version = "1.6.7"; checkInputs = [ pytest ]; @@ -14,6 +14,6 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "d179b90a9927f91427a28c1bac2864c61342cb43ef39aa7324c7c9a96bcc23eb"; + sha256 = "d143f079bfb60b11e9bec09a49695ce2e55ce5ca0246877bdb0818ab7c7fc312"; }; } \ No newline at end of file diff --git a/pkgs/development/python-modules/plyfile/default.nix b/pkgs/development/python-modules/plyfile/default.nix index 1ac8afc8cfb..6a7f09a1451 100644 --- a/pkgs/development/python-modules/plyfile/default.nix +++ b/pkgs/development/python-modules/plyfile/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "plyfile"; - version = "0.5"; + version = "0.6"; src = fetchPypi { inherit pname version; - sha256 = "1cspvhfy2nw1rfwpvrd69wkz0b6clr4wzqpwpmdk872vk2q89yzi"; + sha256 = "067e384e3723f28dbbd8e8f976a9712dadf6761b2d62c4c1a90821e3c5310bce"; }; propagatedBuildInputs = [ numpy ]; diff --git a/pkgs/development/python-modules/prometheus_client/default.nix b/pkgs/development/python-modules/prometheus_client/default.nix index be014bc0f7e..4529ad95175 100644 --- a/pkgs/development/python-modules/prometheus_client/default.nix +++ b/pkgs/development/python-modules/prometheus_client/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "prometheus_client"; - version = "0.3.0"; + version = "0.3.1"; src = fetchPypi { inherit pname version; - sha256 = "69494dc1ac967c0f626c8193e439755c2b95dd4ed22ef31c277601778a50c7ff"; + sha256 = "17bc24c09431644f7c65d7bce9f4237252308070b6395d6d8e87767afe867e24"; }; doCheck = false; diff --git a/pkgs/development/python-modules/psutil/default.nix b/pkgs/development/python-modules/psutil/default.nix index 84fe2f69554..6e048467313 100644 --- a/pkgs/development/python-modules/psutil/default.nix +++ b/pkgs/development/python-modules/psutil/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "psutil"; - version = "5.4.6"; + version = "5.4.7"; src = fetchPypi { inherit pname version; - sha256 = "686e5a35fe4c0acc25f3466c32e716f2d498aaae7b7edc03e2305b682226bcf6"; + sha256 = "5b6322b167a5ba0c5463b4d30dfd379cd4ce245a1162ebf8fc7ab5c5ffae4f3b"; }; # No tests in archive diff --git a/pkgs/development/python-modules/py-cpuinfo/default.nix b/pkgs/development/python-modules/py-cpuinfo/default.nix new file mode 100644 index 00000000000..37cf601695e --- /dev/null +++ b/pkgs/development/python-modules/py-cpuinfo/default.nix @@ -0,0 +1,23 @@ +{ lib +, fetchFromGitHub +, buildPythonPackage +}: + +buildPythonPackage rec { + pname = "py-cpuinfo"; + version = "4.0.0"; + + src = fetchFromGitHub { + owner = "workhorsy"; + repo = pname; + rev = "v${version}"; + sha256 = "1pp561lj80jnvr2038nrzhmks2akxsbdqxvfrqa6n340x81981lm"; + }; + + meta = { + description = "Get CPU info with pure Python 2 & 3"; + homepage = https://github.com/workhorsy/py-cpuinfo; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/py3status/default.nix b/pkgs/development/python-modules/py3status/default.nix index e47771d5ca0..8a7dcc63f57 100644 --- a/pkgs/development/python-modules/py3status/default.nix +++ b/pkgs/development/python-modules/py3status/default.nix @@ -18,10 +18,10 @@ buildPythonPackage rec { pname = "py3status"; - version = "3.11"; + version = "3.12"; src = fetchPypi { inherit pname version; - sha256 = "ba6930427d57b79cf344262494fdcbddbf75f6e37794489d445f2ebb8bc53ec5"; + sha256 = "c9ef49f72c2d83976d2841ab7e70faee3c77f4d7dbb2d3390ef0f0509473ea9a"; }; doCheck = false; propagatedBuildInputs = [ pytz requests tzlocal ]; diff --git a/pkgs/development/python-modules/pyaxmlparser/default.nix b/pkgs/development/python-modules/pyaxmlparser/default.nix index 483ad84eb66..7f9cbf9518e 100644 --- a/pkgs/development/python-modules/pyaxmlparser/default.nix +++ b/pkgs/development/python-modules/pyaxmlparser/default.nix @@ -1,12 +1,12 @@ { buildPythonPackage, stdenv, lxml, click, fetchPypi }: buildPythonPackage rec { - version = "0.3.9"; + version = "0.3.10"; pname = "pyaxmlparser"; src = fetchPypi { inherit pname version; - sha256 = "af714d8adafcea776dd14cbd6d09f5d6d278f7ba333f540dde3b4c34f5f04784"; + sha256 = "5c1f569f4dc2232d7f146eb190bc513373ff6555f97ae904740f966f0fb2dd77"; }; propagatedBuildInputs = [ lxml click ]; diff --git a/pkgs/development/python-modules/pycryptodome/default.nix b/pkgs/development/python-modules/pycryptodome/default.nix index 27ccc7f4687..5b729182ca8 100644 --- a/pkgs/development/python-modules/pycryptodome/default.nix +++ b/pkgs/development/python-modules/pycryptodome/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchPypi, buildPythonPackage }: buildPythonPackage rec { - version = "3.6.4"; + version = "3.6.6"; pname = "pycryptodome"; src = fetchPypi { inherit pname version; - sha256 = "9c7790ffd291c81b934fe0ca8155a67235d33f70d4914bbf7467a447d9dbcb09"; + sha256 = "b3cb4af317d9b84f6df50f0cfa6840ba69556af637a83fd971537823e13d601a"; }; meta = { diff --git a/pkgs/development/python-modules/pycryptodomex/default.nix b/pkgs/development/python-modules/pycryptodomex/default.nix index b5487a24b77..f3f439bc4a5 100644 --- a/pkgs/development/python-modules/pycryptodomex/default.nix +++ b/pkgs/development/python-modules/pycryptodomex/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "pycryptodomex"; - version = "3.6.4"; + version = "3.6.6"; meta = { description = "A self-contained cryptographic library for Python"; @@ -12,6 +12,6 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "4daabe7c0404e673b9029aa43761c779b9b4df2cbe11ccd94daded6a0acd8808"; + sha256 = "d0d448484e161786922b41e112b5d7cf76ef5f0c725ea5107ef866bb14a38b12"; }; } diff --git a/pkgs/development/python-modules/pycuda/default.nix b/pkgs/development/python-modules/pycuda/default.nix index 2774a363f85..2d1da5339af 100644 --- a/pkgs/development/python-modules/pycuda/default.nix +++ b/pkgs/development/python-modules/pycuda/default.nix @@ -22,11 +22,11 @@ let in buildPythonPackage rec { pname = "pycuda"; - version = "2017.1.1"; + version = "2018.1"; src = fetchPypi { inherit pname version; - sha256 = "0qxmcjax32p1ywicw9sha2rvfbak4kjbx9pq57j3wq4cwf296nkb"; + sha256 = "7079f7738e83ee79ae26f0827ada29fe55921fec9760201199cc2bfb69446c92"; }; preConfigure = '' diff --git a/pkgs/development/python-modules/pygmo/default.nix b/pkgs/development/python-modules/pygmo/default.nix new file mode 100644 index 00000000000..2500121dc9e --- /dev/null +++ b/pkgs/development/python-modules/pygmo/default.nix @@ -0,0 +1,48 @@ +{ lib +, fetchFromGitHub +, buildPythonPackage +, cmake +, eigen +, nlopt +, ipopt +, boost +, pagmo2 +, numpy +, cloudpickle +, ipyparallel +, numba +}: + +buildPythonPackage rec { + pname = "pygmo"; + version = "2.8"; + + src = fetchFromGitHub { + owner = "esa"; + repo = "pagmo2"; + rev = "v${version}"; + sha256 = "1xwxamcn3fkwr62jn6bkanrwy0cvsksf75hfwx4fvl56awnbz41z"; + }; + + buildInputs = [ cmake eigen nlopt ipopt boost pagmo2 ]; + propagatedBuildInputs = [ numpy cloudpickle ipyparallel numba ]; + + preBuild = '' + cp -v -r $src/* . + cmake -DCMAKE_INSTALL_PREFIX=$out -DPAGMO_BUILD_TESTS=no -DCMAKE_SYSTEM_NAME=Linux -DPagmo_DIR=${pagmo2} -DPAGMO_BUILD_PYGMO=yes -DPAGMO_BUILD_PAGMO=no -DPAGMO_WITH_EIGEN3=yes -DPAGMO_WITH_NLOPT=yes -DNLOPT_LIBRARY=${nlopt}/lib/libnlopt_cxx.so -DPAGMO_WITH_IPOPT=yes -DIPOPT=${ipopt} + + make install + mv $out/lib/python*/site-packages/pygmo wheel + cd wheel + ''; + + # dont do tests + doCheck = false; + + meta = { + description = "Parallel optimisation for Python"; + homepage = https://esa.github.io/pagmo2/; + license = lib.licenses.gpl3Plus; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/pyhomematic/default.nix b/pkgs/development/python-modules/pyhomematic/default.nix index 4ec77ed96c1..cd10edd2b64 100644 --- a/pkgs/development/python-modules/pyhomematic/default.nix +++ b/pkgs/development/python-modules/pyhomematic/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pyhomematic"; - version = "0.1.46"; + version = "0.1.47"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "0a0ba8de05fc6d60bbb0beec7e808fb231abcb566c3bc17de532f72b18fe2837"; + sha256 = "bdac91dc6810b3d9f53d26daf6e6f26480c556fc3b43890e376aa23c17afd60b"; }; # PyPI tarball does not include tests/ directory diff --git a/pkgs/development/python-modules/pylast/default.nix b/pkgs/development/python-modules/pylast/default.nix index 89ae2f37d10..64479a7b5af 100644 --- a/pkgs/development/python-modules/pylast/default.nix +++ b/pkgs/development/python-modules/pylast/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pylast"; - version = "2.3.0"; + version = "2.4.0"; src = fetchPypi { inherit pname version; - sha256 = "f1e8615bac27386712ab74338e6dbd01ff7adbf6648a3debf921cef6bad80014"; + sha256 = "8e883f13b70c3879fc821bbee1accf27ea4e68898f4462cbbe358f615adcbbfb"; }; propagatedBuildInputs = [ certifi six ]; diff --git a/pkgs/development/python-modules/pylint/default.nix b/pkgs/development/python-modules/pylint/default.nix index 0156e92738a..c9a44548c14 100644 --- a/pkgs/development/python-modules/pylint/default.nix +++ b/pkgs/development/python-modules/pylint/default.nix @@ -3,13 +3,13 @@ buildPythonPackage rec { pname = "pylint"; - version = "2.0.1"; + version = "2.1.1"; disabled = pythonOlder "3.4"; src = fetchPypi { inherit pname version; - sha256 = "2c90a24bee8fae22ac98061c896e61f45c5b73c2e0511a4bf53f99ba56e90434"; + sha256 = "31142f764d2a7cd41df5196f9933b12b7ee55e73ef12204b648ad7e556c119fb"; }; checkInputs = [ pytest pytestrunner pytest_xdist pyenchant ]; diff --git a/pkgs/development/python-modules/pylti/default.nix b/pkgs/development/python-modules/pylti/default.nix index 600d6406405..32cef1e5da8 100644 --- a/pkgs/development/python-modules/pylti/default.nix +++ b/pkgs/development/python-modules/pylti/default.nix @@ -22,7 +22,7 @@ buildPythonPackage rec { pname = "PyLTI"; - version = "0.6.0"; + version = "0.7.0"; disabled = !isPy27; @@ -39,7 +39,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "b3203c5d0d8a527c092518d82d312757c036055ff628023985ab615ef471e602"; + sha256 = "80938a235b1ab390f6889a95237d087ea7adde5cc50fcae9c80c49898e8ee78e"; }; meta = { diff --git a/pkgs/development/python-modules/pymatgen-lammps/default.nix b/pkgs/development/python-modules/pymatgen-lammps/default.nix new file mode 100644 index 00000000000..dbe9107c7c8 --- /dev/null +++ b/pkgs/development/python-modules/pymatgen-lammps/default.nix @@ -0,0 +1,31 @@ +{ lib +, fetchurl +, buildPythonPackage +, pymatgen +, lammps +, pytestrunner +, pytest +, isPy3k +}: + +buildPythonPackage rec { + pname = "pymatgen-lammps"; + version = "0.4.5"; + disabled = (!isPy3k); + + src = fetchurl { + url = "https://gitlab.com/costrouc/${pname}/-/archive/v${version}/${pname}-v${version}.tar.gz"; + sha256 = "0shldl8is3195jmji7dr3zsh1bzxlahaqrmpr28niks7nnfj80fx"; + }; + + buildInputs = [ pytestrunner ]; + checkInputs = [ pytest ]; + propagatedBuildInputs = [ pymatgen ]; + + meta = { + description = "A LAMMPS wrapper using pymatgen"; + homepage = https://gitlab.com/costrouc/pymatgen-lammps; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/pymatgen/default.nix b/pkgs/development/python-modules/pymatgen/default.nix index 874f7bfa308..d810a5d6b4d 100644 --- a/pkgs/development/python-modules/pymatgen/default.nix +++ b/pkgs/development/python-modules/pymatgen/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pymatgen"; - version = "2018.6.27"; + version = "2018.8.10"; src = fetchPypi { inherit pname version; - sha256 = "8078af7fda4f9a07f1e389ffe08de3511213acdf9fb2ed9f9ffe89b9b12b8568"; + sha256 = "9bb3b170ca8654c956fa2efdd31107570c0610f7585d90e4a541eb99cee41603"; }; nativeBuildInputs = [ glibcLocales ]; diff --git a/pkgs/development/python-modules/pyodbc/default.nix b/pkgs/development/python-modules/pyodbc/default.nix index ae1133fc0be..b28c1a87647 100644 --- a/pkgs/development/python-modules/pyodbc/default.nix +++ b/pkgs/development/python-modules/pyodbc/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "pyodbc"; - version = "4.0.23"; + version = "4.0.24"; disabled = isPyPy; # use pypypdbc instead src = fetchPypi { inherit pname version; - sha256 = "bb33d032c1f25781db64e2e4fecf77047fab2ddde42a6cd9496e3c66fb8e9f66"; + sha256 = "4326abb737dec36156998d52324921673d30f575e1e0998f0c5edd7de20e61d4"; }; buildInputs = [ libiodbc ]; diff --git a/pkgs/development/python-modules/pyowm/default.nix b/pkgs/development/python-modules/pyowm/default.nix index 55f96416efd..58a8dee155a 100644 --- a/pkgs/development/python-modules/pyowm/default.nix +++ b/pkgs/development/python-modules/pyowm/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pyowm"; - version = "2.8.0"; + version = "2.9.0"; src = fetchPypi { inherit pname version; - sha256 = "0y2r322pcamabar70513pbyiq26x33l1aq9cim6k30lk9p4aq310"; + sha256 = "ed175873823a2fedb48e453505c974ca39f3f75006ef1af54fdbcf72e6796849"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/pyphen/default.nix b/pkgs/development/python-modules/pyphen/default.nix index 4cc7f1493f8..7a182b6be4a 100644 --- a/pkgs/development/python-modules/pyphen/default.nix +++ b/pkgs/development/python-modules/pyphen/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Pyphen"; - version = "0.9.4"; + version = "0.9.5"; src = fetchPypi { inherit pname version; - sha256 = "1mqb5jrigxipxzp1d8nbwkq0cfjw77pnn6hc4mp1yd2mn059mymb"; + sha256 = "3b633a50873156d777e1f1075ba4d8e96a6ad0a3ca42aa3ea9a6259f93f18921"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/pytest-asyncio/default.nix b/pkgs/development/python-modules/pytest-asyncio/default.nix index e1ff0998396..6b4ce6f6123 100644 --- a/pkgs/development/python-modules/pytest-asyncio/default.nix +++ b/pkgs/development/python-modules/pytest-asyncio/default.nix @@ -1,13 +1,13 @@ { stdenv, buildPythonPackage, fetchPypi, pytest, isPy3k }: buildPythonPackage rec { pname = "pytest-asyncio"; - version = "0.8.0"; + version = "0.9.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "f32804bb58a66e13a3eda11f8942a71b1b6a30466b0d2ffe9214787aab0e172e"; + sha256 = "fbd92c067c16111174a1286bfb253660f1e564e5146b39eeed1133315cf2c2cf"; }; buildInputs = [ pytest ]; @@ -15,6 +15,11 @@ buildPythonPackage rec { # No tests in archive doCheck = false; + # LICENSE file is not distributed. https://github.com/pytest-dev/pytest-asyncio/issues/92 + postPatch = '' + substituteInPlace setup.cfg --replace "license_file = LICENSE" "" + ''; + meta = with stdenv.lib; { description = "library for testing asyncio code with pytest"; license = licenses.asl20; diff --git a/pkgs/development/python-modules/pytest-benchmark/default.nix b/pkgs/development/python-modules/pytest-benchmark/default.nix new file mode 100644 index 00000000000..0f3475f715d --- /dev/null +++ b/pkgs/development/python-modules/pytest-benchmark/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pytestrunner +, pytest +, py-cpuinfo +, pythonOlder +, pathlib +, statistics +}: + +buildPythonPackage rec { + pname = "pytest-benchmark"; + version = "3.1.1"; + + src = fetchFromGitHub { + owner = "ionelmc"; + repo = pname; + rev = "v${version}"; + sha256 = "1ch079dlc6c9ag74dh4dg6plkmh0h8kn78ari3fgadc75bald71m"; + }; + + propagatedBuildInputs = [ pytest py-cpuinfo ] ++ lib.optional (pythonOlder "3.4") [ pathlib statistics ]; + + meta = { + description = "Py.test fixture for benchmarking code"; + homepage = https://github.com/ionelmc/pytest-benchmark; + license = lib.licenses.bsd2; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/pytest-flakes/default.nix b/pkgs/development/python-modules/pytest-flakes/default.nix index c8ae9882a1e..f8823b966da 100644 --- a/pkgs/development/python-modules/pytest-flakes/default.nix +++ b/pkgs/development/python-modules/pytest-flakes/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "pytest-flakes"; - version = "3.0.2"; + version = "4.0.0"; src = fetchPypi { inherit pname version; - sha256 = "763ec290b89e2dc8f25f49d71cb9b869b8df843697b730233f61c78f847f2e57"; + sha256 = "341964bf5760ebbdde9619f68a17d5632c674c3f6903ef66daa0a4f540b3d143"; }; buildInputs = [ pytestpep8 pytest ]; diff --git a/pkgs/development/python-modules/pytest-xdist/default.nix b/pkgs/development/python-modules/pytest-xdist/default.nix index 2e88a765417..46d505b3801 100644 --- a/pkgs/development/python-modules/pytest-xdist/default.nix +++ b/pkgs/development/python-modules/pytest-xdist/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pytest-xdist"; - version = "1.22.3"; + version = "1.23.0"; src = fetchPypi { inherit pname version; - sha256 = "48868d1f461122ac8c5fb60487b6da03c0d73dcb06a9d79e06c4eab8ef62a5c3"; + sha256 = "28e25e79698b2662b648319d3971c0f9ae0e6500f88258ccb9b153c31110ba9b"; }; nativeBuildInputs = [ setuptools_scm ]; diff --git a/pkgs/development/python-modules/pytest/default.nix b/pkgs/development/python-modules/pytest/default.nix index 0e3f89fa152..3fae0442a66 100644 --- a/pkgs/development/python-modules/pytest/default.nix +++ b/pkgs/development/python-modules/pytest/default.nix @@ -1,9 +1,9 @@ { stdenv, buildPythonPackage, fetchPypi, attrs, hypothesis, py , setuptools_scm, setuptools, six, pluggy, funcsigs, isPy3k, more-itertools -, atomicwrites, mock, writeText +, atomicwrites, mock, writeText, pathlib2 }: buildPythonPackage rec { - version = "3.6.3"; + version = "3.7.2"; pname = "pytest"; preCheck = '' @@ -13,13 +13,13 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "0453c8676c2bee6feb0434748b068d5510273a916295fd61d306c4f22fbfd752"; + sha256 = "3459a123ad5532852d36f6f4501dfe1acf4af1dd9541834a164666aa40395b02"; }; checkInputs = [ hypothesis mock ]; buildInputs = [ setuptools_scm ]; propagatedBuildInputs = [ attrs py setuptools six pluggy more-itertools atomicwrites] - ++ (stdenv.lib.optional (!isPy3k) funcsigs); + ++ stdenv.lib.optionals (!isPy3k) [ funcsigs pathlib2 ]; checkPhase = '' runHook preCheck diff --git a/pkgs/development/python-modules/python-ctags3/default.nix b/pkgs/development/python-modules/python-ctags3/default.nix index ba29154df3a..c37abf7b55f 100644 --- a/pkgs/development/python-modules/python-ctags3/default.nix +++ b/pkgs/development/python-modules/python-ctags3/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "python-ctags3"; - version = "1.2.4"; + version = "1.3.0"; src = fetchPypi { inherit pname version; - sha256 = "62e1d48a8cd88756767f3f5e3f1b1a81bc84deeb736f0c9480a5b5d066f63c3e"; + sha256 = "69029185ec70db4180be2b58e9a7245700c7ddcdc9049bf0641448f439112176"; }; meta = with lib; { diff --git a/pkgs/development/python-modules/python-daemon/default.nix b/pkgs/development/python-modules/python-daemon/default.nix index c44af185a10..76544adaf0b 100644 --- a/pkgs/development/python-modules/python-daemon/default.nix +++ b/pkgs/development/python-modules/python-daemon/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "python-daemon"; - version = "2.1.2"; + version = "2.2.0"; src = fetchPypi { inherit pname version; - sha256 = "261c859be5c12ae7d4286dc6951e87e9e1a70a882a8b41fd926efc1ec4214f73"; + sha256 = "aca149ebf7e73f10cd554b2df5c95295d49add8666348eff6195053ec307728c"; }; # A test fail within chroot builds. diff --git a/pkgs/development/python-modules/python-docx/default.nix b/pkgs/development/python-modules/python-docx/default.nix index 11ade481df5..1a85c5256d7 100644 --- a/pkgs/development/python-modules/python-docx/default.nix +++ b/pkgs/development/python-modules/python-docx/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "python-docx"; - version = "0.8.6"; + version = "0.8.7"; src = fetchPypi { inherit pname version; - sha256 = "117i84s6fcdsrfckbvznnqgqwhnf1x0523ps16cki8sg9byydv2m"; + sha256 = "ba9f2a7ca391b78ab385d796b38af3f21bab23c727fc8e0c5e630448d1a11fe3"; }; checkInputs = [ behave mock pyparsing pytest ]; diff --git a/pkgs/development/python-modules/python_openzwave/default.nix b/pkgs/development/python-modules/python_openzwave/default.nix index d29365c86ba..e04915a503d 100644 --- a/pkgs/development/python-modules/python_openzwave/default.nix +++ b/pkgs/development/python-modules/python_openzwave/default.nix @@ -5,13 +5,13 @@ buildPythonPackage rec { pname = "python_openzwave"; - version = "0.4.7"; + version = "0.4.9"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "b28a3abefc04d1d04dd68ee5a695b091e96ba7ab9a9eaa67db43dd55b61a4664"; + sha256 = "97ddd104f52e3a4d7115c3de5d2136631d1f66627fc9b45d56956c3f2b6e0cdb"; extension = "zip"; }; diff --git a/pkgs/development/python-modules/pyunifi/default.nix b/pkgs/development/python-modules/pyunifi/default.nix index 31ec613df4c..e0bc32746e3 100644 --- a/pkgs/development/python-modules/pyunifi/default.nix +++ b/pkgs/development/python-modules/pyunifi/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "pyunifi"; - version = "2.13"; + version = "2.14"; src = fetchPypi { inherit pname version; - sha256 = "1dhbfzv5a29v763m0b9wsc4pvkdr979w7g4rz7ak8hsi4sx6b9dq"; + sha256 = "9439ffc992ce381a39d64b5e3f4460e53872faa9cca60dcf5cee94fc0eba7fca"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/pyzmq/default.nix b/pkgs/development/python-modules/pyzmq/default.nix index 26c453e3a09..31b08d0a9e0 100644 --- a/pkgs/development/python-modules/pyzmq/default.nix +++ b/pkgs/development/python-modules/pyzmq/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pyzmq"; - version = "17.1.0"; + version = "17.1.2"; src = fetchPypi { inherit pname version; - sha256 = "2199f753a230e26aec5238b0518b036780708a4c887d4944519681a920b9dee4"; + sha256 = "a72b82ac1910f2cf61a49139f4974f994984475f771b0faa730839607eeedddf"; }; checkInputs = [ pytest tornado ]; diff --git a/pkgs/development/python-modules/qtconsole/default.nix b/pkgs/development/python-modules/qtconsole/default.nix index 5b35acc0404..67b9a07a36d 100644 --- a/pkgs/development/python-modules/qtconsole/default.nix +++ b/pkgs/development/python-modules/qtconsole/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "qtconsole"; - version = "4.3.1"; + version = "4.4.1"; src = fetchPypi { inherit pname version; - sha256 = "eff8c2faeda567a0bef5781f419a64e9977988db101652b312b9d74ec0a5109c"; + sha256 = "7870b19e6a6b0ab3acc09ee65463c0ca7568b3a01a6902d7c4e1ed2c4fc4e176"; }; buildInputs = [ nose ] ++ lib.optionals isPy27 [mock]; diff --git a/pkgs/development/python-modules/regex/default.nix b/pkgs/development/python-modules/regex/default.nix index f3e6d1f5e0a..2394858e13e 100644 --- a/pkgs/development/python-modules/regex/default.nix +++ b/pkgs/development/python-modules/regex/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "regex"; - version = "2018.07.11"; + version = "2018.08.17"; src = fetchPypi { inherit pname version; - sha256 = "9308dbce8e5ff4ee06b172a777f6c7f650a5835a5ad41a6080eb501639c27a2f"; + sha256 = "56494baf1ed525deea426d3676b1ae3fdcc906b55eccfcb4ea928453e11f2a43"; }; postCheck = '' diff --git a/pkgs/development/python-modules/reikna/default.nix b/pkgs/development/python-modules/reikna/default.nix index 14e8f9f74ce..760ca0056ff 100644 --- a/pkgs/development/python-modules/reikna/default.nix +++ b/pkgs/development/python-modules/reikna/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "reikna"; - version = "0.7.0"; + version = "0.7.1"; src = fetchPypi { inherit pname version; - sha256 = "e27af9a202b8cdedd07793abbd3282806ec724aba091a27c76d7ba8284cfd8ba"; + sha256 = "0afc5d502cc9ba0dadd88c15d72e2fdaa09fee31faaae5064889732de7940953"; }; checkInputs = [ sphinx pytestcov pytest ]; diff --git a/pkgs/development/python-modules/reportlab/default.nix b/pkgs/development/python-modules/reportlab/default.nix index 298c3c79e38..e2f2a7814aa 100644 --- a/pkgs/development/python-modules/reportlab/default.nix +++ b/pkgs/development/python-modules/reportlab/default.nix @@ -11,11 +11,11 @@ let ft = freetype.overrideAttrs (oldArgs: { dontDisableStatic = true; }); in buildPythonPackage rec { pname = "reportlab"; - version = "3.5.2"; + version = "3.5.6"; src = fetchPypi { inherit pname version; - sha256 = "08986267eaf25d62c3802512f0a97dc3426d0c82f52c8beb576689582eb85b7f"; + sha256 = "3836a49e7ea7bce458f437cbc094633c7fd4ac027180565875c18ecc726f261e"; }; checkInputs = [ glibcLocales ]; diff --git a/pkgs/development/python-modules/rlp/default.nix b/pkgs/development/python-modules/rlp/default.nix index 381a784d24a..77ada95b301 100644 --- a/pkgs/development/python-modules/rlp/default.nix +++ b/pkgs/development/python-modules/rlp/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "rlp"; - version = "1.0.1"; + version = "1.0.2"; src = fetchPypi { inherit pname version; - sha256 = "492c11b18e89af42f98e96bca7671ffee4ad4cf5e69ea23b4d2221157d81b512"; + sha256 = "040fb5172fa23d27953a886c40cac989fc031d0629db934b5a9edcd2fb28df1e"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/rope/default.nix b/pkgs/development/python-modules/rope/default.nix index db08ad2a5c0..e5164f27f56 100644 --- a/pkgs/development/python-modules/rope/default.nix +++ b/pkgs/development/python-modules/rope/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "rope"; - version = "0.10.7"; + version = "0.11.0"; src = fetchPypi { inherit pname version; - sha256 = "1lc01pjn0yr6yqcpbf6kk170zg8zhnyzj8kqlsch1mag0g9dz7m0"; + sha256 = "a108c445e1cd897fe19272ab7877d172e7faf3d4148c80e7d20faba42ea8f7b2"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/s3fs/default.nix b/pkgs/development/python-modules/s3fs/default.nix index 0053b125bcb..7a9454734d9 100644 --- a/pkgs/development/python-modules/s3fs/default.nix +++ b/pkgs/development/python-modules/s3fs/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "s3fs"; - version = "0.1.5"; + version = "0.1.6"; src = fetchPypi { inherit pname version; - sha256 = "4fbab74d72ceeb1a6f249165bde7b1d1c4dd758390339f52c84f0832bc5117a7"; + sha256 = "38a3dda6800a5dc6ed697bff8e9a47d84f5c28d186dc25d2ff2f91b445f0dae5"; }; buildInputs = [ docutils ]; diff --git a/pkgs/development/python-modules/setuptools/default.nix b/pkgs/development/python-modules/setuptools/default.nix index b10cdfae5c7..b61af72909f 100644 --- a/pkgs/development/python-modules/setuptools/default.nix +++ b/pkgs/development/python-modules/setuptools/default.nix @@ -8,13 +8,13 @@ # Should use buildPythonPackage here somehow stdenv.mkDerivation rec { pname = "setuptools"; - version = "40.0.0"; + version = "40.2.0"; name = "${python.libPrefix}-${pname}-${version}"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "012adb8e25fbfd64c652e99e7bab58799a3aaf05d39ab38561f69190a909015f"; + sha256 = "47881d54ede4da9c15273bac65f9340f8929d4f0213193fa7894be384f2dcfa6"; }; nativeBuildInputs = [ unzip wrapPython ]; diff --git a/pkgs/development/python-modules/setuptools_scm/default.nix b/pkgs/development/python-modules/setuptools_scm/default.nix index 1420428e973..f6e0daea5ad 100644 --- a/pkgs/development/python-modules/setuptools_scm/default.nix +++ b/pkgs/development/python-modules/setuptools_scm/default.nix @@ -1,11 +1,11 @@ { stdenv, buildPythonPackage, fetchPypi, pip }: buildPythonPackage rec { pname = "setuptools_scm"; - version = "2.1.0"; + version = "3.1.0"; src = fetchPypi { inherit pname version; - sha256 = "a767141fecdab1c0b3c8e4c788ac912d7c94a0d6c452d40777ba84f918316379"; + sha256 = "1191f2a136b5e86f7ca8ab00a97ef7aef997131f1f6d4971be69a1ef387d8b40"; }; buildInputs = [ pip ]; diff --git a/pkgs/development/python-modules/shippai/default.nix b/pkgs/development/python-modules/shippai/default.nix index ac035061692..b386fe6c2fa 100644 --- a/pkgs/development/python-modules/shippai/default.nix +++ b/pkgs/development/python-modules/shippai/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "shippai"; # Please make sure that vdirsyncer still builds if you update this package. - version = "0.2.3"; + version = "0.3.1"; src = fetchPypi { inherit pname version; - sha256 = "1ppwywzg4d12h658682ssmingm6ls6a96p4ak26i2w9d4lf8pfsc"; + sha256 = "9e8d1ca5a742a7ea175cebda3090497d42348517e8d2f05f9854d0f30f1a48ad"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/simpleeval/default.nix b/pkgs/development/python-modules/simpleeval/default.nix index b3377e75f67..831cfede950 100644 --- a/pkgs/development/python-modules/simpleeval/default.nix +++ b/pkgs/development/python-modules/simpleeval/default.nix @@ -2,10 +2,10 @@ buildPythonPackage rec { pname = "simpleeval"; - version = "0.9.5"; + version = "0.9.6"; src = fetchPypi { inherit pname version; - sha256 = "0sda13bqg9l4j17iczmfanxbzsg6fm9aw8i3crzsjfxx51rwj1i3"; + sha256 = "848fdb9ee5f30cf93b9f0d840db6e7562633d20abf7d67c2382a0a2162a79410"; }; meta = { homepage = https://github.com/danthedeckie/simpleeval; diff --git a/pkgs/development/python-modules/snakeviz/default.nix b/pkgs/development/python-modules/snakeviz/default.nix index 9a3afc3fb4b..2b0ff6e443a 100644 --- a/pkgs/development/python-modules/snakeviz/default.nix +++ b/pkgs/development/python-modules/snakeviz/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "snakeviz"; - version = "0.4.1"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "18vsaw1wmf903fg21zkk6a9b49gj47g52jm5h52g4iygngjhpx79"; + sha256 = "5fe23667708a4ed04047abfbf209675a8488ea6ea8c038d7de06d8a083fb3531"; }; # Upstream doesn't run tests from setup.py diff --git a/pkgs/development/python-modules/soco/default.nix b/pkgs/development/python-modules/soco/default.nix index 152a61bbf1d..d039756eb81 100644 --- a/pkgs/development/python-modules/soco/default.nix +++ b/pkgs/development/python-modules/soco/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "soco"; - version = "0.15"; + version = "0.16"; src = fetchPypi { inherit pname version; - sha256 = "18bxpbd7l9gns0jpvx09z023kbbz7b6i4f99i8silsb1jv682kg0"; + sha256 = "7bed4475e3f134283af1f520a9b2e6ce2a8e69bdc1b58ee68528b3d093972424"; }; propagatedBuildInputs = [ xmltodict requests ]; diff --git a/pkgs/development/python-modules/spglib/default.nix b/pkgs/development/python-modules/spglib/default.nix index 9b51c445e73..7385387eb86 100644 --- a/pkgs/development/python-modules/spglib/default.nix +++ b/pkgs/development/python-modules/spglib/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "spglib"; - version = "1.10.4.1"; + version = "1.10.4.11"; src = fetchPypi { inherit pname version; - sha256 = "1a50c48dfea450c431a6d6790aa2ebbb10dc43eef97f2794f5038ed1eeecbd30"; + sha256 = "13b0a227d2dc4079fe36d5bcce4e672400c7c5dfc5d3cd25ccb9521ef592d93e"; }; propagatedBuildInputs = [ numpy ]; diff --git a/pkgs/development/python-modules/sphinx/default.nix b/pkgs/development/python-modules/sphinx/default.nix index 97f76be15cb..525ff4122d8 100644 --- a/pkgs/development/python-modules/sphinx/default.nix +++ b/pkgs/development/python-modules/sphinx/default.nix @@ -26,10 +26,10 @@ buildPythonPackage rec { pname = "Sphinx"; - version = "1.7.6"; + version = "1.7.7"; src = fetchPypi { inherit pname version; - sha256 = "217ad9ece2156ed9f8af12b5d2c82a499ddf2c70a33c5f81864a08d8c67b9efc"; + sha256 = "71531900af3f68625a29c4e00381bee8f85255219a3d500a3e255076a45b735e"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/sqlalchemy/default.nix b/pkgs/development/python-modules/sqlalchemy/default.nix index 8c3c6fe2374..2f755869d79 100644 --- a/pkgs/development/python-modules/sqlalchemy/default.nix +++ b/pkgs/development/python-modules/sqlalchemy/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "SQLAlchemy"; - version = "1.2.10"; + version = "1.2.11"; src = fetchPypi { inherit pname version; - sha256 = "72325e67fb85f6e9ad304c603d83626d1df684fdf0c7ab1f0352e71feeab69d8"; + sha256 = "ef6569ad403520ee13e180e1bfd6ed71a0254192a934ec1dbd3dbf48f4aa9524"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/sqlmap/default.nix b/pkgs/development/python-modules/sqlmap/default.nix index 674d1e66f7e..5713d7591dc 100644 --- a/pkgs/development/python-modules/sqlmap/default.nix +++ b/pkgs/development/python-modules/sqlmap/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "sqlmap"; - version = "1.2.7"; + version = "1.2.8"; src = fetchPypi { inherit pname version; - sha256 = "9e570fcac05b3231d5e01398e496b88a78601938bba228e381994a1b3fe3bd88"; + sha256 = "d261d93e7abed20543c261327d30b9f9936f0bed3c1a595f39218eeb66094526"; }; # No tests in archive diff --git a/pkgs/development/python-modules/statistics/default.nix b/pkgs/development/python-modules/statistics/default.nix new file mode 100644 index 00000000000..4380e592ff5 --- /dev/null +++ b/pkgs/development/python-modules/statistics/default.nix @@ -0,0 +1,27 @@ +{ lib +, fetchPypi +, buildPythonPackage +, docutils +}: + +buildPythonPackage rec { + pname = "statistics"; + version = "1.0.3.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "2dc379b80b07bf2ddd5488cad06b2b9531da4dd31edb04dc9ec0dc226486c138"; + }; + + propagatedBuildInputs = [ docutils ]; + + # statistics package does not have any tests + doCheck = false; + + meta = { + description = "A Python 2.* port of 3.4 Statistics Module"; + homepage = https://github.com/digitalemagine/py-statistics; + license = lib.licenses.asl20; + maintainers = with lib.maintainers; [ costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/stripe/default.nix b/pkgs/development/python-modules/stripe/default.nix index f2e4b946b5d..c1ebdec90cc 100644 --- a/pkgs/development/python-modules/stripe/default.nix +++ b/pkgs/development/python-modules/stripe/default.nix @@ -3,7 +3,7 @@ buildPythonPackage rec { pname = "stripe"; - version = "2.0.3"; + version = "2.6.0"; # Tests require network connectivity and there's no easy way to disable # them. ~ C. @@ -11,7 +11,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "17a618541c19a48d5591f4011a282cbcbbe2d05c361109f8f5381aeec05eb270"; + sha256 = "ce8fc8af33e12d3d92b083b86952227e9af6854eaf6a044a7725ac543b0582f8"; }; checkInputs = [ unittest2 mock ]; diff --git a/pkgs/development/python-modules/svg-path/default.nix b/pkgs/development/python-modules/svg-path/default.nix index 04031fcbc10..3a11bf67e13 100644 --- a/pkgs/development/python-modules/svg-path/default.nix +++ b/pkgs/development/python-modules/svg-path/default.nix @@ -1,11 +1,11 @@ { stdenv, buildPythonPackage, fetchPypi }: buildPythonPackage rec { pname = "svg.path"; - version = "2.2"; + version = "3.0"; src = fetchPypi { inherit pname version; - sha256 = "08kp03i4yiqdkz7a7l7d7kzszahmhigrml2502zi1ybndrh7ayxw"; + sha256 = "7b568f90f67fd25413c8da9f8bc9f9f8ab089425c20fa03330e97e77d13880ee"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/sybil/default.nix b/pkgs/development/python-modules/sybil/default.nix index 6930cb2a559..c78016d7296 100644 --- a/pkgs/development/python-modules/sybil/default.nix +++ b/pkgs/development/python-modules/sybil/default.nix @@ -3,11 +3,11 @@ buildPythonApplication rec { pname = "sybil"; - version = "1.0.8"; + version = "1.0.9"; src = fetchPypi { inherit pname version; - sha256 = "1e17e10bac4c56ef5b6752866a7d100f5ae856ff97d805c4d6cac73be80863d3"; + sha256 = "41d2f1dba8fd1d8ead5e9b1220b590fab8b0d1ca01d43da08555b1fb08d4d8e8"; }; checkInputs = [ pytest nose ]; diff --git a/pkgs/development/python-modules/tox/default.nix b/pkgs/development/python-modules/tox/default.nix index 7719687f2ea..1cb9770367a 100644 --- a/pkgs/development/python-modules/tox/default.nix +++ b/pkgs/development/python-modules/tox/default.nix @@ -11,7 +11,7 @@ buildPythonPackage rec { pname = "tox"; - version = "3.1.2"; + version = "3.2.1"; buildInputs = [ setuptools_scm ]; propagatedBuildInputs = [ packaging pluggy py six virtualenv ]; @@ -20,7 +20,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "9f0cbcc36e08c2c4ae90d02d3d1f9a62231f974bcbc1df85e8045946d8261059"; + sha256 = "eb61aa5bcce65325538686f09848f04ef679b5cd9b83cc491272099b28739600"; }; meta = with lib; { diff --git a/pkgs/development/python-modules/tqdm/default.nix b/pkgs/development/python-modules/tqdm/default.nix index fd5cd47be38..5b65e156a42 100644 --- a/pkgs/development/python-modules/tqdm/default.nix +++ b/pkgs/development/python-modules/tqdm/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "tqdm"; - version = "4.23.4"; + version = "4.25.0"; src = fetchPypi { inherit pname version; - sha256 = "77b8424d41b31e68f437c6dd9cd567aebc9a860507cb42fbd880a5f822d966fe"; + sha256 = "a3364bd83ce4777320b862e3c8a93d7da91e20a95f06ef79bed7dd71c654cafa"; }; buildInputs = [ nose coverage glibcLocales flake8 ]; diff --git a/pkgs/development/python-modules/trio/default.nix b/pkgs/development/python-modules/trio/default.nix index c630668386e..4924fa527c6 100644 --- a/pkgs/development/python-modules/trio/default.nix +++ b/pkgs/development/python-modules/trio/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "trio"; - version = "0.5.0"; + version = "0.6.0"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "ce0b4f59e2f41af0433247f92ce83116bf356a3c2ab5ca5942cf359a1105b4a8"; + sha256 = "7a80c10b89068950aa649edd4b09a6f56236642c2c2e648b956289d2301fdb9e"; }; checkInputs = [ pytest pyopenssl trustme ]; diff --git a/pkgs/development/python-modules/txaio/default.nix b/pkgs/development/python-modules/txaio/default.nix index 5558a7e339a..2bfdbae918a 100644 --- a/pkgs/development/python-modules/txaio/default.nix +++ b/pkgs/development/python-modules/txaio/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "txaio"; - version = "2.10.0"; + version = "18.7.1"; src = fetchPypi { inherit pname version; - sha256 = "4797f9f6a9866fe887c96abc0110a226dd5744c894dc3630870542597ad30853"; + sha256 = "701de939e90bb80f7e085357081552437526752199def5541dddfc34c0b0593f"; }; checkInputs = [ pytest mock ]; diff --git a/pkgs/development/python-modules/typeguard/default.nix b/pkgs/development/python-modules/typeguard/default.nix index a6eb75b53cf..6ccde34f48a 100644 --- a/pkgs/development/python-modules/typeguard/default.nix +++ b/pkgs/development/python-modules/typeguard/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "typeguard"; - version = "2.2.0"; + version = "2.2.2"; src = fetchPypi { inherit pname version; - sha256 = "e588ff78b7093fc31c3b00c78db09b9b3764157b03b867f25ccd1dd3efd96ffb"; + sha256 = "b8ddc6e2e60bd64b7003f9a685a09ba387b74adf2f6bea7534a76d61892f573e"; }; buildInputs = [ setuptools_scm ]; diff --git a/pkgs/development/python-modules/uproot/default.nix b/pkgs/development/python-modules/uproot/default.nix index 368f787313b..e2cc1105f09 100644 --- a/pkgs/development/python-modules/uproot/default.nix +++ b/pkgs/development/python-modules/uproot/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "uproot"; - version = "2.9.6"; + version = "2.9.11"; src = fetchPypi { inherit pname version; - sha256 = "1fb8dd19bd1f1ed376a96e92b32ff44f7d3688bda55eda9055898111fdac8391"; + sha256 = "da71e9e239129ec2ae7a62f9d35aebd46456f05e000ef14f32fe2c9fa8ec92c2"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/vega/default.nix b/pkgs/development/python-modules/vega/default.nix index 1813ae587c1..09106e3a6d4 100644 --- a/pkgs/development/python-modules/vega/default.nix +++ b/pkgs/development/python-modules/vega/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "vega"; - version = "1.3.0"; + version = "1.4.0"; src = fetchPypi { inherit pname version; - sha256 = "2c5561238fbd4a0669aea457decb47c5155e9741b47a41f23cc030387f725edc"; + sha256 = "cf9701dac0111c09ea009ab06cbb81f27b1d9c23ebf58ebdf08b6994a37f13ac"; }; buildInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/voluptuous/default.nix b/pkgs/development/python-modules/voluptuous/default.nix index 0d4f250509f..b45a46b3a83 100644 --- a/pkgs/development/python-modules/voluptuous/default.nix +++ b/pkgs/development/python-modules/voluptuous/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "voluptuous"; - version = "0.11.1"; + version = "0.11.5"; src = fetchPypi { inherit pname version; - sha256 = "af7315c9fa99e0bfd195a21106c82c81619b42f0bd9b6e287b797c6b6b6a9918"; + sha256 = "567a56286ef82a9d7ae0628c5842f65f516abcb496e74f3f59f1d7b28df314ef"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/websockets_client/default.nix b/pkgs/development/python-modules/websockets_client/default.nix index 846e9a2a0f5..194f3f126a3 100644 --- a/pkgs/development/python-modules/websockets_client/default.nix +++ b/pkgs/development/python-modules/websockets_client/default.nix @@ -1,11 +1,11 @@ { stdenv, buildPythonPackage, fetchPypi, six }: buildPythonPackage rec { pname = "websocket_client"; - version = "0.48.0"; + version = "0.51.0"; src = fetchPypi { inherit version pname; - sha256 = "18f1170e6a1b5463986739d9fd45c4308b0d025c1b2f9b88788d8f69e8a5eb4a"; + sha256 = "030bbfbf29ac9e315ffb207ed5ed42b6981b5038ea00d1e13b02b872cc95e8f6"; }; prePatch = '' diff --git a/pkgs/development/python-modules/whitenoise/default.nix b/pkgs/development/python-modules/whitenoise/default.nix index d2359b2195f..007bb9c879b 100644 --- a/pkgs/development/python-modules/whitenoise/default.nix +++ b/pkgs/development/python-modules/whitenoise/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "whitenoise"; - version = "4.0b4"; + version = "4.0"; src = fetchPypi { inherit pname version; - sha256 = "0ra2bbsihwfhnf1ibahzzabgfjfghxqcrbfx6r5r50mlil5n8bf4"; + sha256 = "1e206c5adfb849942ddd057e599ac472ec1a85d56ae78a5ba24f243ea46a89c5"; }; # No tests diff --git a/pkgs/development/python-modules/widgetsnbextension/default.nix b/pkgs/development/python-modules/widgetsnbextension/default.nix index 0f102dda106..db992c7b932 100644 --- a/pkgs/development/python-modules/widgetsnbextension/default.nix +++ b/pkgs/development/python-modules/widgetsnbextension/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "widgetsnbextension"; - version = "3.3.0"; + version = "3.4.0"; src = fetchPypi { inherit pname version; - sha256 = "c5280a62d293735cdadc7b8884e2affcfb0488420ee09963577f042359726392"; + sha256 = "c9d6e426a1d79d132b57b93b368feba2c66eb7b0fd34bdb901716b4b88e94497"; }; propagatedBuildInputs = [ notebook ]; diff --git a/pkgs/development/python-modules/zeep/default.nix b/pkgs/development/python-modules/zeep/default.nix index b14e0226d73..09beb9d8991 100644 --- a/pkgs/development/python-modules/zeep/default.nix +++ b/pkgs/development/python-modules/zeep/default.nix @@ -25,11 +25,11 @@ buildPythonPackage rec { pname = "zeep"; - version = "3.0.0"; + version = "3.1.0"; src = fetchPypi { inherit pname version; - sha256 = "faab59d57275ce35845f42371cca83b3957982cdca9621228153fb99c770c4fc"; + sha256 = "b2d96881689c3f29e8ea5c8c6abb2b17fb0f470deee15d0d7bec4e74592850f6"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/zodbpickle/default.nix b/pkgs/development/python-modules/zodbpickle/default.nix index c3f41d281c6..746099368fb 100644 --- a/pkgs/development/python-modules/zodbpickle/default.nix +++ b/pkgs/development/python-modules/zodbpickle/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "zodbpickle"; - version = "1.0.1"; + version = "1.0.2"; disabled = isPyPy; # https://github.com/zopefoundation/zodbpickle/issues/10 src = fetchPypi { inherit pname version; - sha256 = "5fdfa84f05b25511a4e1190ec98728aa487e2eb6db016a951fdbb79bcc7307e0"; + sha256 = "f26e6eba6550ff1575ef2f2831fc8bc0b465f17f9757d0b6c7db55fab5702061"; }; # fails.. diff --git a/pkgs/development/tools/misc/strace/default.nix b/pkgs/development/tools/misc/strace/default.nix index 1e449d722c3..33a46e16a3a 100644 --- a/pkgs/development/tools/misc/strace/default.nix +++ b/pkgs/development/tools/misc/strace/default.nix @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { buildInputs = stdenv.lib.optional libunwind.supportsHost libunwind; # support -k - configureFlags = stdenv.lib.optional (stdenv.hostPlatform.isAarch64 || stdenv.hostPlatform.isRiscV) "--enable-mpers=check"; + configureFlags = stdenv.lib.optional (!stdenv.hostPlatform.isx86) "--enable-mpers=check"; # fails 1 out of 523 tests with # "strace-k.test: failed test: ../../strace -e getpid -k ../stack-fcall output mismatch" diff --git a/pkgs/os-specific/linux/busybox/default.nix b/pkgs/os-specific/linux/busybox/default.nix index c5f63d6671c..69fe94a1fe4 100644 --- a/pkgs/os-specific/linux/busybox/default.nix +++ b/pkgs/os-specific/linux/busybox/default.nix @@ -32,14 +32,14 @@ let in stdenv.mkDerivation rec { - name = "busybox-1.29.1"; + name = "busybox-1.29.2"; # Note to whoever is updating busybox: please verify that: # nix-build pkgs/stdenv/linux/make-bootstrap-tools.nix -A test # still builds after the update. src = fetchurl { url = "https://busybox.net/downloads/${name}.tar.bz2"; - sha256 = "1hqlr5b3bsyb6avadz1z4za6pyl32r1krnpcpwwqilhnx8q0f9gw"; + sha256 = "0qax9926qx9lpxiw75f4hkknz1pg0zcn5pkjx5gqfibs2ipgmlk7"; }; hardeningDisable = [ "format" ] ++ lib.optionals enableStatic [ "fortify" ]; diff --git a/pkgs/tools/admin/awscli/default.nix b/pkgs/tools/admin/awscli/default.nix index c454cca0ed6..92e5459df49 100644 --- a/pkgs/tools/admin/awscli/default.nix +++ b/pkgs/tools/admin/awscli/default.nix @@ -19,11 +19,11 @@ let in py.pkgs.buildPythonApplication rec { pname = "awscli"; - version = "1.15.66"; + version = "1.16.1"; src = py.pkgs.fetchPypi { inherit pname version; - sha256 = "004fbd3bb8932465205675a7de94460b5c2d45ddd6916138a2c867e4d0f2a4c4"; + sha256 = "5068efde694e24462646d271335fdef3dde8a0fbbfb986fab0ce7e5368a7df8d"; }; # No tests included diff --git a/pkgs/tools/misc/hdf5/default.nix b/pkgs/tools/misc/hdf5/default.nix index 31813c0b880..e481a31e926 100644 --- a/pkgs/tools/misc/hdf5/default.nix +++ b/pkgs/tools/misc/hdf5/default.nix @@ -16,11 +16,11 @@ assert !cpp || mpi == null; let inherit (stdenv.lib) optional optionals; in stdenv.mkDerivation rec { - version = "1.10.2"; + version = "1.10.3"; name = "hdf5-${version}"; src = fetchurl { url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/${name}/src/${name}.tar.bz2"; - sha256 = "0wfb3w6dzi6zr2g1sdswqy9lxbp7yr4blvyi7k2xya7izmxmpb8w"; + sha256 = "1a85v6812afi6k3gmfdcj80f6ys9kc80v7ysz39pz9948z7dqp66"; }; passthru = { diff --git a/pkgs/tools/networking/modem-manager/default.nix b/pkgs/tools/networking/modem-manager/default.nix index 8612808687e..6ca8c892562 100644 --- a/pkgs/tools/networking/modem-manager/default.nix +++ b/pkgs/tools/networking/modem-manager/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, udev, libgudev, polkit, dbus-glib, ppp, gettext, pkgconfig +{ stdenv, fetchurl, glib, udev, libgudev, polkit, ppp, gettext, pkgconfig , libmbim, libqmi, systemd, fetchpatch }: stdenv.mkDerivation rec { @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ gettext pkgconfig ]; - buildInputs = [ udev libgudev polkit dbus-glib ppp libmbim libqmi systemd ]; + buildInputs = [ glib udev libgudev polkit ppp libmbim libqmi systemd ]; patches = [ # Patch dependency on glib headers, this breaks packages using core headers (networkmanager-qt) diff --git a/pkgs/tools/security/sudo/default.nix b/pkgs/tools/security/sudo/default.nix index 0a760807afb..71cf239d72c 100644 --- a/pkgs/tools/security/sudo/default.nix +++ b/pkgs/tools/security/sudo/default.nix @@ -5,14 +5,14 @@ }: stdenv.mkDerivation rec { - name = "sudo-1.8.23"; + name = "sudo-1.8.24"; src = fetchurl { urls = [ "ftp://ftp.sudo.ws/pub/sudo/${name}.tar.gz" "ftp://ftp.sudo.ws/pub/sudo/OLD/${name}.tar.gz" ]; - sha256 = "0yg62wq8rcrbr7qvh3wgfg2g4bwanbi50cr2lf2cfyy8dydx4qyq"; + sha256 = "1s2v49n905wf3phmdnaa6v1dwck2lrcin0flg85z7klf35x5b25l"; }; prePatch = '' diff --git a/pkgs/tools/typesetting/tex/texlive/bin.nix b/pkgs/tools/typesetting/tex/texlive/bin.nix index 8e7551b4e41..b313fc0b53d 100644 --- a/pkgs/tools/typesetting/tex/texlive/bin.nix +++ b/pkgs/tools/typesetting/tex/texlive/bin.nix @@ -95,12 +95,13 @@ core = stdenv.mkDerivation rec { configureFlags = common.configureFlags ++ [ "--without-x" ] # disable xdvik and xpdfopen - ++ map (what: "--disable-${what}") [ + ++ map (what: "--disable-${what}") ([ "dvisvgm" "dvipng" # ghostscript dependency "luatex" "luajittex" "mp" "pmp" "upmp" "mf" # cairo would bring in X and more "xetex" "bibtexu" "bibtex8" "bibtex-x" "upmendex" # ICU isn't small - ] + ] ++ stdenv.lib.optional (stdenv.hostPlatform.isPower && stdenv.hostPlatform.is64bit) "mfluajit") ++ [ "--without-system-harfbuzz" "--without-system-icu" ] # bogus configure + ; enableParallelBuilding = true; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 4d2bf622e44..a13076e2313 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -4449,6 +4449,8 @@ with pkgs; padthv1 = callPackage ../applications/audio/padthv1 { }; + pagmo2 = callPackage ../development/libraries/pagmo2 { }; + pakcs = callPackage ../development/compilers/pakcs {}; pal = callPackage ../tools/misc/pal { }; @@ -8794,7 +8796,7 @@ with pkgs; grabserial = callPackage ../development/tools/grabserial { }; - mypy = python3Packages.mypy; + mypy = with python3Packages; toPythonApplication mypy; ### DEVELOPMENT / LIBRARIES diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix index 5add53c0dc2..7761e42f544 100644 --- a/pkgs/top-level/perl-packages.nix +++ b/pkgs/top-level/perl-packages.nix @@ -215,7 +215,7 @@ let url = "mirror://cpan/authors/id/M/MS/MSCHOUT/${name}.tar.gz"; sha256 = "58daeb3e44c681ff88f8fb00e4aabaa7a40cbee73dbdb84fcf6c285b15d357bd"; }; - buildInputs = [ ApacheTest URI ]; + buildInputs = [ ApacheTest ]; propagatedBuildInputs = [ ClassLoad HTTPBody HashMultiValue WWWFormUrlEncoded ]; # Fails because /etc/protocols is not available in sandbox and make @@ -526,12 +526,11 @@ let }; ArchiveZip = buildPerlPackage { - name = "Archive-Zip-1.60"; + name = "Archive-Zip-1.62"; src = fetchurl { - url = mirror://cpan/authors/id/P/PH/PHRED/Archive-Zip-1.60.tar.gz; - sha256 = "02y2ylq83hy9kgj57sc0239x65br9sm98c0chsm61s08yc2mpiza"; + url = mirror://cpan/authors/id/P/PH/PHRED/Archive-Zip-1.62.tar.gz; + sha256 = "1jax173w7nm5r6k7ymfcskvs1rw590lyscbqrnfbkjj4cxc65wrb"; }; - buildInputs = [ TestMockModule ]; meta = { description = "Provide an interface to ZIP archive files"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; @@ -1094,10 +1093,10 @@ let }; CarpAlways = buildPerlPackage rec { - name = "Carp-Always-0.13"; + name = "Carp-Always-0.16"; src = fetchurl { url = "mirror://cpan/authors/id/F/FE/FERREIRA/${name}.tar.gz"; - sha256 = "0i2rifkr7ybfcdsqana52487z7vxp2l5qdra0f6ik0ddhn6rzii1"; + sha256 = "1wb6b0qjga7kvn4p8df6k4g1pl2yzaqiln1713xidh3i454i3alq"; }; meta = { description = "Warns and dies noisily with stack backtraces"; @@ -1742,10 +1741,10 @@ let }; CGI = buildPerlPackage rec { - name = "CGI-4.38"; + name = "CGI-4.40"; src = fetchurl { url = "mirror://cpan/authors/id/L/LE/LEEJO/${name}.tar.gz"; - sha256 = "8c58f4a529bb92a914b22b7e64c5e31185c9854a4070a6dfad44fe5cc248e7d4"; + sha256 = "10efff3061b3c31a33b3cc59f955aef9c88d57d12dbac46389758cef92f24f56"; }; buildInputs = [ TestDeep TestNoWarnings TestWarn ]; propagatedBuildInputs = [ HTMLParser ]; @@ -1854,10 +1853,10 @@ let }; CGISimple = buildPerlModule rec { - name = "CGI-Simple-1.15"; + name = "CGI-Simple-1.16"; src = fetchurl { - url = mirror://cpan/authors/id/M/MA/MANWAR/CGI-Simple-1.15.tar.gz; - sha256 = "013dcy9k4sj9alkksk5aqz65ryxw0rxgg71c7w666y941gd8n46q"; + url = mirror://cpan/authors/id/M/MA/MANWAR/CGI-Simple-1.16.tar.gz; + sha256 = "1j07qy22a9k4g1xasxma7yzfmwwn3iy50rkxdhz8hz9f09hiym0f"; }; propagatedBuildInputs = [ IOStringy ]; meta = { @@ -2741,10 +2740,10 @@ let }; Coro = buildPerlPackage rec { - name = "Coro-6.514"; + name = "Coro-6.52"; src = fetchurl { - url = mirror://cpan/authors/id/M/ML/MLEHMANN/Coro-6.514.tar.gz; - sha256 = "0qndvq74knyra9r98pyllsxz0s80dzc1ljx10arjv9whja1l6cyq"; + url = mirror://cpan/authors/id/M/ML/MLEHMANN/Coro-6.52.tar.gz; + sha256 = "1q744smw6m676v8n0ww8jvmh1zg1iw7f7clzblwbfgmhy03h5ja9"; }; propagatedBuildInputs = [ AnyEvent Guard commonsense ]; buildInputs = [ CanaryStability ]; @@ -2781,10 +2780,10 @@ let }; CpanelJSONXS = buildPerlPackage rec { - name = "Cpanel-JSON-XS-4.04"; + name = "Cpanel-JSON-XS-4.05"; src = fetchurl { url = "mirror://cpan/authors/id/R/RU/RURBAN/${name}.tar.gz"; - sha256 = "e128702a266b9a690bd3d380f726c229f9d6d795e8e206b9d32309d06825b2cd"; + sha256 = "dd2b69265604ac6f18b47131565f712d55ed8df3b85f8f58f0c98cad17383663"; }; meta = { description = "CPanel fork of JSON::XS, fast and correct serializing"; @@ -2871,10 +2870,10 @@ let }; CPANPerlReleases = buildPerlPackage rec { - name = "CPAN-Perl-Releases-3.70"; + name = "CPAN-Perl-Releases-3.74"; src = fetchurl { url = "mirror://cpan/authors/id/B/BI/BINGOS/${name}.tar.gz"; - sha256 = "1yv9gq3rzhccskmpd9nn2n8v8zc6r9rlq5x47l0yva29yfgqb16r"; + sha256 = "0qdh79fl38cyq9kp2g2s934gl1nn5jd88rgmqarqcmja8xhpfcp3"; }; meta = { homepage = https://github.com/bingos/cpan-perl-releases; @@ -3644,10 +3643,10 @@ let }; DateTime = buildPerlPackage rec { - name = "DateTime-1.49"; + name = "DateTime-1.50"; src = fetchurl { url = "mirror://cpan/authors/id/D/DR/DROLSKY/${name}.tar.gz"; - sha256 = "0hbw4zq1562slnz7g7hyhfhyq98dzkk3i5g21x3xra5cvfix93kh"; + sha256 = "165iqk1xvhs5j0kzsipa7aqycx3h37wqsl2r4jl104yqvmqhqszd"; }; buildInputs = [ CPANMetaCheck TestFatal TestWarnings ]; propagatedBuildInputs = [ DateTimeLocale DateTimeTimeZone ]; @@ -5937,10 +5936,10 @@ let }; FileMimeInfo = buildPerlPackage rec { - name = "File-MimeInfo-0.28"; + name = "File-MimeInfo-0.29"; src = fetchurl { - url = mirror://cpan/authors/id/M/MI/MICHIELB/File-MimeInfo-0.28.tar.gz; - sha256 = "1ipbh63bkh1r2gy5g7q4bzhki8j29mm1jkhbv60p9vwsdys5s91a"; + url = mirror://cpan/authors/id/M/MI/MICHIELB/File-MimeInfo-0.29.tar.gz; + sha256 = "1sh8r6vczyz08zm8vfsjmkg6a165wch54akjdrd1vbifcmwjg5pi"; }; doCheck = false; # Failed test 'desktop file is the right one' buildInputs = [ FileBaseDir FileDesktopEntry ]; @@ -6256,10 +6255,10 @@ let }; Filter = buildPerlPackage { - name = "Filter-1.58"; + name = "Filter-1.59"; src = fetchurl { - url = mirror://cpan/authors/id/R/RU/RURBAN/Filter-1.58.tar.gz; - sha256 = "6de91cb4cbfe08d0ccffbca39aed57f9237be602b8183f13fd163fc8cb657f3d"; + url = mirror://cpan/authors/id/R/RU/RURBAN/Filter-1.59.tar.gz; + sha256 = "b4babfad4e0566a9a61199735f6e622a60d3274122752304f18f623412bf4e5a"; }; meta = { description = "Source Filters"; @@ -6354,10 +6353,10 @@ let }; GamesSolitaireVerify = buildPerlModule { - name = "Games-Solitaire-Verify-0.1800"; + name = "Games-Solitaire-Verify-0.1900"; src = fetchurl { - url = mirror://cpan/authors/id/S/SH/SHLOMIF/Games-Solitaire-Verify-0.1800.tar.gz; - sha256 = "935ba997c49437a095adb39fd18233d5e378941aa9974df46e56aa6234f1fced"; + url = mirror://cpan/authors/id/S/SH/SHLOMIF/Games-Solitaire-Verify-0.1900.tar.gz; + sha256 = "6b17847bd69da05ee089562cf40f2aac15e64c113175eca4fb501d4e86b48181"; }; buildInputs = [ TestDifferences ]; propagatedBuildInputs = [ ClassXSAccessor ExceptionClass ListMoreUtils ]; @@ -6452,10 +6451,10 @@ let }; GetoptLongDescriptive = buildPerlPackage rec { - name = "Getopt-Long-Descriptive-0.102"; + name = "Getopt-Long-Descriptive-0.103"; src = fetchurl { url = "mirror://cpan/authors/id/R/RJ/RJBS/${name}.tar.gz"; - sha256 = "9ad4b98f294aa0515cc3150a1ae878d39e470762b78d8bd9df055eba9dea2846"; + sha256 = "70e1bae7404a9dfb638b5d12e5bd4ea97e3bee743a4555909307d68e0111f4b2"; }; buildInputs = [ CPANMetaCheck TestFatal TestWarnings ]; propagatedBuildInputs = [ ParamsValidate SubExporter ]; @@ -7782,10 +7781,10 @@ let }; IOSocketSSL = buildPerlPackage rec { - name = "IO-Socket-SSL-2.058"; + name = "IO-Socket-SSL-2.059"; src = fetchurl { url = "mirror://cpan/authors/id/S/SU/SULLR/${name}.tar.gz"; - sha256 = "746cd17c292cfc206b394497a060b0582d0b06a1040e6bb27e6530d56786e40b"; + sha256 = "217debbe0a79f0b7c5669978b4d733271998df4497f4718f78456e5f54d64849"; }; propagatedBuildInputs = [ NetSSLeay ]; # Fix path to default certificate store. @@ -8761,10 +8760,10 @@ let }; LogAny = buildPerlPackage rec { - name = "Log-Any-1.706"; + name = "Log-Any-1.707"; src = fetchurl { url = "mirror://cpan/authors/id/P/PR/PREACTION/${name}.tar.gz"; - sha256 = "3ed0e5a4b7d490ab00624b7f905421239261f1dc976192aad2c0d1509bec08be"; + sha256 = "74510f8cbee12637462e7c6020c8943d447a1e8e149a256f8168ee47562c65f1"; }; # Syslog test fails. preCheck = "rm t/syslog.t"; @@ -9542,7 +9541,7 @@ let }; }; - MLDBM = buildPerlPackage rec { + MLDBM = buildPerlModule rec { name = "MLDBM-2.05"; src = fetchurl { url = "mirror://cpan/authors/id/C/CH/CHORNY/${name}.tar.gz"; @@ -9716,10 +9715,10 @@ let }; ModuleCoreList = buildPerlPackage { - name = "Module-CoreList-5.20180720"; + name = "Module-CoreList-5.20180820"; src = fetchurl { - url = mirror://cpan/authors/id/B/BI/BINGOS/Module-CoreList-5.20180720.tar.gz; - sha256 = "0l6dyj4m4qgv2yzq3pp0bkvg1j9nh9mcm1p4x3g3j93gkba7whws"; + url = mirror://cpan/authors/id/B/BI/BINGOS/Module-CoreList-5.20180820.tar.gz; + sha256 = "1ccs5mqcfxjv8bax2nfsg11b2vc3sqyapfapxyzrjhaa2fmdn54l"; }; meta = { homepage = http://dev.perl.org/; @@ -9939,11 +9938,11 @@ let }; }; - ModuleScanDeps = let version = "1.24"; in buildPerlPackage { + ModuleScanDeps = let version = "1.25"; in buildPerlPackage { name = "Module-ScanDeps-${version}"; src = fetchurl { url = "mirror://cpan/authors/id/R/RS/RSCHUPP/Module-ScanDeps-${version}.tar.gz"; - sha256 = "0s6cj90ckhy351gql52ksh4ms1x8piv26iadl09fcpzkx7j0srw9"; + sha256 = "13280nq0d6zc58mcz3kvs2m85a741czq0fabk69ks1nr4j1w2nl4"; }; buildInputs = [ TestRequires ]; meta = { @@ -10018,10 +10017,10 @@ let }; }; Mojolicious = buildPerlPackage rec { - name = "Mojolicious-7.88"; + name = "Mojolicious-7.93"; src = fetchurl { url = "mirror://cpan/authors/id/S/SR/SRI/${name}.tar.gz"; - sha256 = "4c4c9c05131fcd175cd6370e15d2586baec1a3ec882cb6971e1f5f52b5e0d785"; + sha256 = "00c30fc566fee0823af0a75bdf4f170531655df14beca6d51f0e453a43aaad5d"; }; meta = { homepage = https://mojolicious.org/; @@ -10044,10 +10043,10 @@ let }; MonitoringPlugin = buildPerlPackage rec { - name = "Monitoring-Plugin-0.39"; + name = "Monitoring-Plugin-0.40"; src = fetchurl { url = "mirror://cpan/authors/id/N/NI/NIERLEIN/${name}.tar.gz"; - sha256 = "030cw86j8712z8rn66k935gbilb5rcj3lnk4n53vh1b2phrszvjw"; + sha256 = "0vr3wwdn3zs246qwi04bqk8jir6l88j5m59jk97hmfyj4xz6pfpq"; }; propagatedBuildInputs = [ ClassAccessor ConfigTiny MathCalcUnits ParamsValidate ]; meta = { @@ -10480,12 +10479,12 @@ let }; MooseXGetopt = buildPerlModule rec { - name = "MooseX-Getopt-0.71"; + name = "MooseX-Getopt-0.72"; src = fetchurl { url = "mirror://cpan/authors/id/E/ET/ETHER/${name}.tar.gz"; - sha256 = "de18f8ea0a5650cbbdebecb8f4c028f5f951fc5698332f7b8e20c7874902c259"; + sha256 = "a378411a061ed239554d2b7f86b2b82bf55f600901243a6ec3fd29557d171b2e"; }; - buildInputs = [ ModuleBuildTiny MooseXStrictConstructor PathTiny TestDeep TestFatal TestRequires TestTrap TestWarnings ]; + buildInputs = [ ModuleBuildTiny MooseXStrictConstructor PathTiny TestDeep TestFatal TestNeeds TestTrap TestWarnings ]; propagatedBuildInputs = [ GetoptLongDescriptive MooseXRoleParameterized ]; meta = { homepage = https://github.com/moose/MooseX-Getopt; @@ -10910,10 +10909,10 @@ let }; Mouse = buildPerlModule rec { - name = "Mouse-2.5.4"; + name = "Mouse-2.5.6"; src = fetchurl { - url = mirror://cpan/authors/id/S/SK/SKAJI/Mouse-v2.5.4.tar.gz; - sha256 = "041nm46bxxyi1fd8w69r45k434b6m43va2s06pr3bys6igxic79d"; + url = mirror://cpan/authors/id/S/SK/SKAJI/Mouse-v2.5.6.tar.gz; + sha256 = "1j3048ip691j91rdig6wrlg6i4jdzhszxmz5pi2g7n355rl2w00l"; }; buildInputs = [ DevelPPPort ModuleBuildXSUtil TestException TestFatal TestLeakTrace TestOutput TestRequires TryTiny self.version ]; NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isi686 "-fno-stack-protector"; @@ -11195,7 +11194,7 @@ let sha256 = "8391696db9e96c374b72984c0bad9c7d1c9f3b4efe68f9ddf429a77548e0e269"; }; nativeBuildInputs = [ pkgs.pkgconfig ]; - buildInputs = [ TestPod TestPodCoverage pkgs.dbus ]; + buildInputs = [ pkgs.dbus TestPod TestPodCoverage ]; propagatedBuildInputs = [ XMLTwig ]; meta = { homepage = http://www.freedesktop.org/wiki/Software/dbus; @@ -11205,10 +11204,10 @@ let }; NetDNS = buildPerlPackage rec { - name = "Net-DNS-1.16"; + name = "Net-DNS-1.17"; src = fetchurl { url = "mirror://cpan/authors/id/N/NL/NLNETLABS/${name}.tar.gz"; - sha256 = "8163eebaf46d1a870b6f596684f345da7c3a7461d7dba2b85f23e02d8982ea37"; + sha256 = "9a79fd8fea1a708726c18d193ae4437479206ccb20ffa7f0971371e172e2c2e0"; }; propagatedBuildInputs = [ DigestHMAC IOSocketIP ]; makeMakerFlags = "--noonline-tests"; @@ -11335,10 +11334,10 @@ let }; NetPing = buildPerlPackage { - name = "Net-Ping-2.68"; + name = "Net-Ping-2.70"; src = fetchurl { - url = mirror://cpan/authors/id/R/RU/RURBAN/Net-Ping-2.68.tar.gz; - sha256 = "d01ac2fcdf684c4a23a07104fbb147cfbdbda47fd5b660912124258f29afd7e3"; + url = mirror://cpan/authors/id/R/RU/RURBAN/Net-Ping-2.70.tar.gz; + sha256 = "41400089736f528cfa1196083905d4bbd313c4653a03fab8578cebd5b5b6aa5a"; }; meta = { description = "Check a remote host for reachability"; @@ -11835,10 +11834,10 @@ let }; ParamsValidationCompiler = buildPerlPackage rec { - name = "Params-ValidationCompiler-0.27"; + name = "Params-ValidationCompiler-0.30"; src = fetchurl { - url = mirror://cpan/authors/id/D/DR/DROLSKY/Params-ValidationCompiler-0.27.tar.gz; - sha256 = "1cpr188c2xm0kkmdir6slcsgv7v6ibqff4lax8s0whwx6ml9kaah"; + url = mirror://cpan/authors/id/D/DR/DROLSKY/Params-ValidationCompiler-0.30.tar.gz; + sha256 = "1jqn1l4m4i341g14kmjsf3a1kn7vv6z89cix0xjjgr1v70iywnyw"; }; propagatedBuildInputs = [ EvalClosure ExceptionClass ]; buildInputs = [ Specio Test2PluginNoWarnings Test2Suite TestSimple13 TestWithoutModule ]; @@ -11849,10 +11848,10 @@ let }; Paranoid = buildPerlPackage rec { - name = "Paranoid-2.05"; + name = "Paranoid-2.06"; src = fetchurl { url = "mirror://cpan/authors/id/C/CO/CORLISS/Paranoid/${name}.tar.gz"; - sha256 = "583dfa0279733531f360795ad1cf4aa652d537b2b0bbd3c6925d0c8d75cbb3df"; + sha256 = "48763ec19d0a4194ecf613bd63e46325510228da9100c2e796615dc778612d3c"; }; patches = [ ../development/perl-modules/Paranoid-blessed-path.patch ]; preConfigure = '' @@ -11987,10 +11986,10 @@ let }; PathTiny = buildPerlPackage { - name = "Path-Tiny-0.106"; + name = "Path-Tiny-0.108"; src = fetchurl { - url = mirror://cpan/authors/id/D/DA/DAGOLDEN/Path-Tiny-0.106.tar.gz; - sha256 = "308e39087b626013569a15783b896d61916fd1e67d06017f40cff567af36464d"; + url = mirror://cpan/authors/id/D/DA/DAGOLDEN/Path-Tiny-0.108.tar.gz; + sha256 = "3c49482be2b3eb7ddd7e73a5b90cff648393f5d5de334ff126ce7a3632723ff5"; }; meta = { description = "File path utility"; @@ -12243,10 +12242,10 @@ let }; PkgConfig = buildPerlPackage rec { - name = "PkgConfig-0.19026"; + name = "PkgConfig-0.21026"; src = fetchurl { url = "mirror://cpan/authors/id/P/PL/PLICEASE/${name}.tar.gz"; - sha256 = "5cb6e934d29dd93e04c2fa779f4b7e51361edaf56957b47a232017a4bb7e922c"; + sha256 = "018f8d3c74e661df66046b26e57f4c5991adafe202af7ea2d1c6f6bcafde584b"; }; meta = { description = "Pure-Perl Core-Only replacement for pkg-config"; @@ -12553,10 +12552,10 @@ let }; PPIxRegexp = buildPerlModule rec { - name = "PPIx-Regexp-0.061"; + name = "PPIx-Regexp-0.062"; src = fetchurl { url = "mirror://cpan/authors/id/W/WY/WYANT/${name}.tar.gz"; - sha256 = "e2d63a4102024e15994c685672d30c6d708272a1600abcd6241e6f2c1b3b7c92"; + sha256 = "1218fe4c94b3cb9d894c6cd8a69bb4172eac54ce083b70f7a8bf13868a5a0733"; }; propagatedBuildInputs = [ PPI ]; meta = { @@ -12665,11 +12664,11 @@ let }; ProtocolHTTP2 = buildPerlModule rec { - name = "Protocol-HTTP2-1.08"; + name = "Protocol-HTTP2-1.09"; src = fetchurl { url = "mirror://cpan/authors/id/C/CR/CRUX/${name}.tar.gz"; - sha256 = "06y1djgzbn340hixav85728dvp8mj2mx2qf5fzkqxh145g5q860g"; + sha256 = "1bc0ybkqhv81dscgzlbr62w4zqjsidcikmkbjanzn83g2b6ia9nc"; }; buildInputs = [ AnyEvent ModuleBuildTiny NetSSLeay TestLeakTrace TestSharedFork TestTCP ]; }; @@ -12933,10 +12932,10 @@ let }; PodMarkdown = buildPerlPackage { - name = "Pod-Markdown-3.005"; + name = "Pod-Markdown-3.101"; src = fetchurl { - url = mirror://cpan/authors/id/R/RW/RWSTAUNER/Pod-Markdown-3.005.tar.gz; - sha256 = "00s3745kl4vbxqyi2lx149q5ghyfazc4fd00kcpl84bb87jfgdzq"; + url = mirror://cpan/authors/id/R/RW/RWSTAUNER/Pod-Markdown-3.101.tar.gz; + sha256 = "0h7hx4k1c3k00cfnlf226bkxnxaz01705m10vxm9cxh52xn6pzz8"; }; buildInputs = [ TestDifferences ]; meta = { @@ -13217,7 +13216,7 @@ let url = "mirror://cpan/authors/id/K/KK/KKANE/${name}.tar.gz"; sha256 = "a8652a2214308faff2c68be5ce64c904dcccc5e86be7f32376c1590869d01844"; }; - propagatedBuildInputs = [ LWP LWPProtocolhttps URI ]; + propagatedBuildInputs = [ LWPProtocolHttps ]; meta = { description = "A simple client for interacting with RESTful http/https resources"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; @@ -15838,10 +15837,10 @@ let }; TestSimple13 = buildPerlPackage rec { - name = "Test-Simple-1.302138"; + name = "Test-Simple-1.302140"; src = fetchurl { - url = mirror://cpan/authors/id/E/EX/EXODIST/Test-Simple-1.302138.tar.gz; - sha256 = "568615a551075d3657cb0cbca55cf3672734c954f0306e9823ecd002aa911655"; + url = mirror://cpan/authors/id/E/EX/EXODIST/Test-Simple-1.302140.tar.gz; + sha256 = "73f5440c7ae55e13706e9ebeaa7247df973226470f028344ea3cd21e1642bd1d"; }; meta = { description = "Basic utilities for writing tests"; @@ -16190,10 +16189,10 @@ let }; TextCSV = buildPerlPackage rec { - name = "Text-CSV-1.95"; + name = "Text-CSV-1.97"; src = fetchurl { - url = mirror://cpan/authors/id/I/IS/ISHIGAKI/Text-CSV-1.95.tar.gz; - sha256 = "7e0a11d9c1129a55b68a26aa4b37c894279df255aa63ec8341d514ab848dbf61"; + url = mirror://cpan/authors/id/I/IS/ISHIGAKI/Text-CSV-1.97.tar.gz; + sha256 = "cc350462efa8d39d5c8a1da5f205bc31620cd52d9865a769c8e3ed1b41640fd5"; }; meta = { description = "Comma-separated values manipulator (using XS or PurePerl)"; @@ -16391,10 +16390,10 @@ let }; TextQuoted = buildPerlPackage { - name = "Text-Quoted-2.09"; + name = "Text-Quoted-2.10"; src = fetchurl { - url = mirror://cpan/authors/id/A/AL/ALEXMV/Text-Quoted-2.09.tar.gz; - sha256 = "446c3e8da7e65f7988cd36e9da1159614eb0b337d6c4c0dec8f6df7673b96c5f"; + url = mirror://cpan/authors/id/B/BP/BPS/Text-Quoted-2.10.tar.gz; + sha256 = "081bf95ec9220af26cec89161e61bf73f9fbcbfeee1d9af15139e5d7b708f445"; }; propagatedBuildInputs = [ TextAutoformat ]; meta = { @@ -16443,10 +16442,10 @@ let }; TextSimpleTable = buildPerlPackage { - name = "Text-SimpleTable-2.05"; + name = "Text-SimpleTable-2.07"; src = fetchurl { - url = mirror://cpan/authors/id/M/MR/MRAMBERG/Text-SimpleTable-2.05.tar.gz; - sha256 = "1akcv3iq4y6mjc88p0j9yvv6g0g5cnc9nvzxnmsswnx5si7v5am5"; + url = mirror://cpan/authors/id/M/MR/MRAMBERG/Text-SimpleTable-2.07.tar.gz; + sha256 = "1v8r8qpzg283p2pqqr8dqrak2bxray1b2jmib0qk75jffqw3yv95"; }; meta = { description = "Simple eyecandy ASCII tables"; @@ -16982,10 +16981,10 @@ let }; TypeTiny = buildPerlPackage { - name = "Type-Tiny-1.002002"; + name = "Type-Tiny-1.004002"; src = fetchurl { - url = mirror://cpan/authors/id/T/TO/TOBYINK/Type-Tiny-1.002002.tar.gz; - sha256 = "a85b0c8f99b5c9b5558f0bcc8893b44299fcccf3c264ff924940d09d91d8882c"; + url = mirror://cpan/authors/id/T/TO/TOBYINK/Type-Tiny-1.004002.tar.gz; + sha256 = "e52c7e9593052aed157a15d473b5c25a1dbb3454bf3cd6913df94cc9bb2be707"; }; propagatedBuildInputs = [ ExporterTiny ]; meta = { @@ -17688,10 +17687,10 @@ let }; XMLParserLite = buildPerlPackage { - name = "XML-Parser-Lite-0.721"; + name = "XML-Parser-Lite-0.722"; src = fetchurl { - url = mirror://cpan/authors/id/P/PH/PHRED/XML-Parser-Lite-0.721.tar.gz; - sha256 = "1fh8g77nkfv9n07ivilnfxdapx6jx13whf8q0anrmnxrr9pa6qjq"; + url = mirror://cpan/authors/id/P/PH/PHRED/XML-Parser-Lite-0.722.tar.gz; + sha256 = "1vk3jwh1kfcsmc5kvxzqdnb1cllvf0yf27fg0ra0w6jkw4ks143g"; }; buildInputs = [ TestRequires ]; meta = { @@ -17802,10 +17801,10 @@ let }; XMLSemanticDiff = buildPerlModule { - name = "XML-SemanticDiff-1.0006"; + name = "XML-SemanticDiff-1.0007"; src = fetchurl { - url = mirror://cpan/authors/id/S/SH/SHLOMIF/XML-SemanticDiff-1.0006.tar.gz; - sha256 = "1z0lkb7xzhw9calz4pbwzry2lqqpy6pw6pvfn2gv70ry1xqycr0k"; + url = mirror://cpan/authors/id/P/PE/PERIGRIN/XML-SemanticDiff-1.0007.tar.gz; + sha256 = "1xd00821y795fy2rag8aizb5wsbbzfxgmdf9qwpvdxn3pgpyzz85"; }; propagatedBuildInputs = [ XMLParser ]; meta = { diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 3ba335146ce..0178375b7bc 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -182,6 +182,8 @@ in { asana = callPackage ../development/python-modules/asana { }; + ase = callPackage ../development/python-modules/ase { }; + asn1crypto = callPackage ../development/python-modules/asn1crypto { }; aspy-yaml = callPackage ../development/python-modules/aspy.yaml { }; @@ -268,6 +270,8 @@ in { dbus = pkgs.dbus; }; + dftfit = callPackage ../development/python-modules/dftfit { }; + discid = callPackage ../development/python-modules/discid { }; discordpy = callPackage ../development/python-modules/discordpy { }; @@ -278,6 +282,8 @@ in { distorm3 = callPackage ../development/python-modules/distorm3 { }; + docutils = callPackage ../development/python-modules/docutils { }; + dogtail = callPackage ../development/python-modules/dogtail { }; diff-match-patch = callPackage ../development/python-modules/diff-match-patch { }; @@ -310,6 +316,10 @@ in { jira = callPackage ../development/python-modules/jira { }; + lammps-cython = callPackage ../development/python-modules/lammps-cython { + mpi = pkgs.openmpi; + }; + lmtpd = callPackage ../development/python-modules/lmtpd { }; logster = callPackage ../development/python-modules/logster { }; @@ -348,6 +358,8 @@ in { palettable = callPackage ../development/python-modules/palettable { }; + pathlib = callPackage ../development/python-modules/pathlib { }; + pdf2image = callPackage ../development/python-modules/pdf2image { }; pdfminer = callPackage ../development/python-modules/pdfminer_six { }; @@ -392,6 +404,8 @@ in { PyChromecast = callPackage ../development/python-modules/pychromecast { }; + py-cpuinfo = callPackage ../development/python-modules/py-cpuinfo { }; + pydbus = callPackage ../development/python-modules/pydbus { }; pydocstyle = callPackage ../development/python-modules/pydocstyle { }; @@ -408,6 +422,8 @@ in { pygame_sdl2 = callPackage ../development/python-modules/pygame_sdl2 { }; + pygmo = callPackage ../development/python-modules/pygmo { }; + pygobject2 = callPackage ../development/python-modules/pygobject { }; pygobject3 = callPackage ../development/python-modules/pygobject/3.nix { }; @@ -437,6 +453,8 @@ in { pymatgen = callPackage ../development/python-modules/pymatgen { }; + pymatgen-lammps = callPackage ../development/python-modules/pymatgen-lammps { }; + pynisher = callPackage ../development/python-modules/pynisher { }; pyparser = callPackage ../development/python-modules/pyparser { }; @@ -519,6 +537,8 @@ in { spglib = callPackage ../development/python-modules/spglib { }; + statistics = callPackage ../development/python-modules/statistics { }; + sumo = callPackage ../development/python-modules/sumo { }; supervise_api = callPackage ../development/python-modules/supervise_api { }; @@ -1455,7 +1475,7 @@ in { ''; }; - celery = callPackage ../development/python-modules/celery { pytest = self.pytest_32; }; + celery = callPackage ../development/python-modules/celery { }; cerberus = callPackage ../development/python-modules/cerberus { }; @@ -1832,28 +1852,21 @@ in { }; }; - pytest = self.pytest_36; + pytest = self.pytest_37; - pytest_36 = callPackage ../development/python-modules/pytest { + pytest_37 = callPackage ../development/python-modules/pytest { # hypothesis tests require pytest that causes dependency cycle hypothesis = self.hypothesis.override { doCheck = false; }; }; - # Needed for celery - pytest_32 = self.pytest_36.overridePythonAttrs( oldAttrs: rec { - version = "3.2.5"; - src = oldAttrs.src.override { - inherit version; - sha256 = "6d5bd4f7113b444c55a3bbb5c738a3dd80d43563d063fc42dcb0aaefbdd78b81"; - }; - }); - pytest-httpbin = callPackage ../development/python-modules/pytest-httpbin { }; pytest-asyncio = callPackage ../development/python-modules/pytest-asyncio { }; pytest-aiohttp = callPackage ../development/python-modules/pytest-aiohttp { }; + pytest-benchmark = callPackage ../development/python-modules/pytest-benchmark { }; + pytestcache = callPackage ../development/python-modules/pytestcache { }; pytest-catchlog = callPackage ../development/python-modules/pytest-catchlog { }; @@ -4998,37 +5011,6 @@ in { }; }; - - docutils = buildPythonPackage rec { - name = "docutils-${version}"; - version = "0.14"; - - src = pkgs.fetchurl { - url = "mirror://sourceforge/docutils/${name}.tar.gz"; - sha256 = "0x22fs3pdmr42kvz6c654756wja305qv6cx1zbhwlagvxgr4xrji"; - }; - - checkPhase = if isPy3k then '' - ${python.interpreter} test3/alltests.py - '' else '' - ${python.interpreter} test/alltests.py - ''; - - # Create symlinks lacking a ".py" suffix, many programs depend on these names - postFixup = '' - (cd $out/bin && for f in *.py; do - ln -s $f $(echo $f | sed -e 's/\.py$//') - done) - ''; - - meta = { - description = "An open-source text processing system for processing plaintext documentation into useful formats, such as HTML or LaTeX"; - homepage = http://docutils.sourceforge.net/; - maintainers = with maintainers; [ garbas AndersonTorres ]; - }; - }; - - dtopt = buildPythonPackage rec { name = "dtopt-0.1"; @@ -9452,27 +9434,6 @@ in { patator = callPackage ../development/python-modules/patator { }; - pathlib = buildPythonPackage rec { - name = "pathlib-${version}"; - version = "1.0.1"; - disabled = pythonAtLeast "3.4"; # Was added to std library in Python 3.4 - - src = pkgs.fetchurl { - url = "mirror://pypi/p/pathlib/${name}.tar.gz"; - sha256 = "17zajiw4mjbkkv6ahp3xf025qglkj0805m9s41c45zryzj6p2h39"; - }; - - checkPhase = '' - ${python.interpreter} -m unittest discover - ''; - - meta = { - description = "Object-oriented filesystem paths"; - homepage = "https://pathlib.readthedocs.org/"; - license = licenses.mit; - }; - }; - pathlib2 = callPackage ../development/python-modules/pathlib2 { }; pathpy = callPackage ../development/python-modules/path.py { }; |