diff options
Diffstat (limited to 'pkgs')
1074 files changed, 31499 insertions, 12581 deletions
diff --git a/pkgs/applications/audio/MMA/default.nix b/pkgs/applications/audio/MMA/default.nix index 92f46abddd5..42f8af99e6f 100644 --- a/pkgs/applications/audio/MMA/default.nix +++ b/pkgs/applications/audio/MMA/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, makeWrapper, python3, alsaUtils, timidity }: stdenv.mkDerivation rec { - version = "16.06"; + version = "19.08"; pname = "mma"; src = fetchurl { url = "https://www.mellowood.ca/mma/mma-bin-${version}.tar.gz"; - sha256 = "1g4gvc0nr0qjc0fyqrnx037zpaasgymgmrm5s7cdxqnld9wqw8ww"; + sha256 = "02g2q9f1hbrj1v4mbf7zx2571vqpfla5803hcjpkdkvn8g0dwci0"; }; buildInputs = [ makeWrapper python3 alsaUtils timidity ]; diff --git a/pkgs/applications/audio/ams-lv2/default.nix b/pkgs/applications/audio/ams-lv2/default.nix index 0750c38550b..34f5667bfca 100644 --- a/pkgs/applications/audio/ams-lv2/default.nix +++ b/pkgs/applications/audio/ams-lv2/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "An LV2 port of the internal modules found in Alsa Modular Synth"; - homepage = http://objectivewave.wordpress.com/ams-lv2; + homepage = "https://github.com/blablack/ams-lv2"; license = licenses.gpl3; maintainers = [ maintainers.goibhniu ]; platforms = platforms.linux; diff --git a/pkgs/applications/audio/bshapr/default.nix b/pkgs/applications/audio/bshapr/default.nix index 1d49ca1fa4f..732a8cf1ce2 100644 --- a/pkgs/applications/audio/bshapr/default.nix +++ b/pkgs/applications/audio/bshapr/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "BShapr"; - version = "0.4"; + version = "0.6"; src = fetchFromGitHub { owner = "sjaehn"; repo = pname; rev = "v${version}"; - sha256 = "02b4wdfhr9y7z2k6ls086gv3vz4sjf7b1k8ryh573bzd8nr4896v"; + sha256 = "0mi8f0svq1h9cmmxyskcazr5x2q4dls3j9jc6ahi5rlk7i0bpa74"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/audio/cadence/default.nix b/pkgs/applications/audio/cadence/default.nix index 4a757ed434a..cd1d837e1dd 100644 --- a/pkgs/applications/audio/cadence/default.nix +++ b/pkgs/applications/audio/cadence/default.nix @@ -9,12 +9,12 @@ }: mkDerivation rec { - version = "0.9.0"; + version = "0.9.1"; pname = "cadence"; src = fetchzip { url = "https://github.com/falkTX/Cadence/archive/v${version}.tar.gz"; - sha256 = "08vcggypkdfr70v49innahs5s11hi222dhhnm5wcqzdgksphqzwx"; + sha256 = "07z8grnnpkd0nf3y3r6qjlk1jlzrbhdrp9mnhrhhmws54p1bhl20"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/audio/espeak-ng/default.nix b/pkgs/applications/audio/espeak-ng/default.nix index 043d5b9d2d3..32cec811d00 100644 --- a/pkgs/applications/audio/espeak-ng/default.nix +++ b/pkgs/applications/audio/espeak-ng/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "espeak-ng"; - version = "1.49.2"; + version = "1.50"; src = fetchFromGitHub { owner = "espeak-ng"; repo = "espeak-ng"; rev = version; - sha256 = "17bbl3zi8214iaaj8kjnancjvmvizwybg3sg17qjq4mf5c6xfg2c"; + sha256 = "0jkqhf2h94vbqq7mg7mmm23bq372fa7mdk941my18c3vkldcir1b"; }; nativeBuildInputs = [ autoconf automake which libtool pkgconfig ronn ]; diff --git a/pkgs/applications/audio/giada/default.nix b/pkgs/applications/audio/giada/default.nix index 3c32365b97f..8907011c16f 100644 --- a/pkgs/applications/audio/giada/default.nix +++ b/pkgs/applications/audio/giada/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "giada"; - version = "0.15.4"; + version = "0.16.0"; src = fetchFromGitHub { owner = "monocasual"; repo = pname; rev = "v${version}"; - sha256 = "0a5lqzxs417alpjr42q5197v6dwgrc74434znszk4lfhivr88p8v"; + sha256 = "1lbxqa4kwzjdd79whrjgh8li453z4ckkjx4s4qzmrv7aqa2xmfsf"; }; configureFlags = [ "--target=linux" ]; diff --git a/pkgs/applications/audio/gpodder/default.nix b/pkgs/applications/audio/gpodder/default.nix index 246cba590f4..b972aae7de8 100644 --- a/pkgs/applications/audio/gpodder/default.nix +++ b/pkgs/applications/audio/gpodder/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, python3, python3Packages, intltool , glibcLocales, gnome3, gtk3, wrapGAppsHook -, ipodSupport ? false, libgpod, gobject-introspection +, gobject-introspection }: python3Packages.buildPythonApplication rec { @@ -50,7 +50,7 @@ python3Packages.buildPythonApplication rec { podcastparser html5lib gtk3 - ] ++ stdenv.lib.optional ipodSupport libgpod; + ]; makeFlags = [ "PREFIX=$(out)" diff --git a/pkgs/applications/audio/lollypop/default.nix b/pkgs/applications/audio/lollypop/default.nix index b555598591d..2d2062696d7 100644 --- a/pkgs/applications/audio/lollypop/default.nix +++ b/pkgs/applications/audio/lollypop/default.nix @@ -79,9 +79,9 @@ python3.pkgs.buildPythonApplication rec { # argument dontWrapGApps = true; - makeWrapperArgs = [ - "\${gappsWrapperArgs[@]}" - ]; + preFixup = '' + makeWrapperArgs+=("''${gappsWrapperArgs[@]}") + ''; meta = with lib; { changelog = "https://gitlab.gnome.org/World/lollypop/tags/${version}"; diff --git a/pkgs/applications/audio/mopidy/iris.nix b/pkgs/applications/audio/mopidy/iris.nix index 37e233b5e9e..88cdde2ceb2 100644 --- a/pkgs/applications/audio/mopidy/iris.nix +++ b/pkgs/applications/audio/mopidy/iris.nix @@ -2,11 +2,11 @@ pythonPackages.buildPythonApplication rec { pname = "Mopidy-Iris"; - version = "3.42.2"; + version = "3.43.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "1v1dy857kxxn1si0x7p3qz63l1af5pln1jji1f7fis6id8iy7wfm"; + sha256 = "1qg9xyjf27dp0810h4kdliyfb8r3kvi37lq8r93d01xwfphdzs05"; }; propagatedBuildInputs = [ diff --git a/pkgs/applications/audio/muse/default.nix b/pkgs/applications/audio/muse/default.nix index 02b1d8ea511..372c8faf773 100644 --- a/pkgs/applications/audio/muse/default.nix +++ b/pkgs/applications/audio/muse/default.nix @@ -21,7 +21,7 @@ stdenv.mkDerivation { version = "3.1pre1"; meta = with stdenv.lib; { - homepage = http://www.muse-sequencer.org; + homepage = "https://www.muse-sequencer.org/"; description = "MIDI/Audio sequencer with recording and editing capabilities"; longDescription = '' MusE is a MIDI/Audio sequencer with recording and editing capabilities diff --git a/pkgs/applications/audio/netease-cloud-music/default.nix b/pkgs/applications/audio/netease-cloud-music/default.nix new file mode 100644 index 00000000000..76dcba304a3 --- /dev/null +++ b/pkgs/applications/audio/netease-cloud-music/default.nix @@ -0,0 +1,82 @@ +{ stdenv, lib, fontconfig, zlib, libGL, glib, pango +, gdk-pixbuf, freetype, atk, cairo, libsForQt5, xorg +, sqlite, taglib, nss, nspr, cups, dbus, alsaLib +, libpulseaudio, deepin, qt5, harfbuzz, p11-kit +, libgpgerror, libudev0-shim, makeWrapper, dpkg, fetchurl }: +let + rpath = lib.makeLibraryPath [ + fontconfig.lib + zlib + stdenv.cc.cc.lib + libGL + glib + pango + gdk-pixbuf + freetype + atk + cairo + libsForQt5.vlc + sqlite + taglib + nss + nspr + cups.lib + dbus.lib + alsaLib + libpulseaudio + xorg.libX11 + xorg.libXext + xorg.libXtst + xorg.libXdamage + xorg.libXScrnSaver + xorg.libxcb + xorg.libXi + deepin.qcef + qt5.qtwebchannel + qt5.qtbase + qt5.qtx11extras + qt5.qtdeclarative + harfbuzz + p11-kit + libgpgerror + ]; + + runtimeLibs = lib.makeLibraryPath [ libudev0-shim ]; + +in stdenv.mkDerivation rec { + pname = "netease-cloud-music"; + version = "1.2.0"; + src = fetchurl { + url = "http://d1.music.126.net/dmusic/netease-cloud-music_1.2.0_amd64_deepin_stable_20190424.deb"; + sha256 = "0hg8jqim77vd0fmk8gfbz2fmlj99byxcm9jn70xf7vk1sy7wp6h1"; + curlOpts = "-A 'Mozilla/5.0'"; + }; + unpackCmd = "${dpkg}/bin/dpkg -x $src ."; + sourceRoot = "."; + + nativeBuildInputs = [ qt5.wrapQtAppsHook makeWrapper ]; + + installPhase = '' + mkdir -p $out + cp -r usr/* $out + ''; + + preFixup = '' + local exefile="$out/bin/netease-cloud-music" + patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" "$exefile" + patchelf --set-rpath "$out/libs:$(patchelf --print-rpath "$exefile"):${rpath}" "$exefile" + + wrapProgram $out/bin/netease-cloud-music \ + --prefix LD_LIBRARY_PATH : "${runtimeLibs}" \ + --set QT_AUTO_SCREEN_SCALE_FACTOR 1 \ + --set QCEF_INSTALL_PATH "${deepin.qcef}/lib/qcef" + ''; + + meta = { + description = "Client for Netease Cloud Music service"; + homepage = https://music.163.com; + platforms = [ "i686-linux" "x86_64-linux" ]; + maintainers = [ stdenv.lib.maintainers.mlatus ]; + license = stdenv.lib.licenses.unfreeRedistributable; + }; +} diff --git a/pkgs/applications/audio/pulseeffects/default.nix b/pkgs/applications/audio/pulseeffects/default.nix index 302dd5c8e69..2d941f74c73 100644 --- a/pkgs/applications/audio/pulseeffects/default.nix +++ b/pkgs/applications/audio/pulseeffects/default.nix @@ -46,13 +46,13 @@ let ]; in stdenv.mkDerivation rec { pname = "pulseeffects"; - version = "4.6.8"; + version = "4.6.9"; src = fetchFromGitHub { owner = "wwmm"; repo = "pulseeffects"; rev = "v${version}"; - sha256 = "09crsg73mvqdknvh6lczwx16x73zb2vb3m53bsapqiaq4lmwy3qr"; + sha256 = "0ag19hvf50ip7z1s8jziy4pm8c72w7qq9zzgb4967l6v17rar4yh"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/audio/renoise/default.nix b/pkgs/applications/audio/renoise/default.nix index 62625aa421d..7b2d92ad59d 100644 --- a/pkgs/applications/audio/renoise/default.nix +++ b/pkgs/applications/audio/renoise/default.nix @@ -4,8 +4,7 @@ with stdenv.lib; # To use the full release version: -# 1) Sign into https://backstage.renoise.com and download the appropriate (x86 or x86_64) version -# for your machine to some stable location. +# 1) Sign into https://backstage.renoise.com and download the release version to some stable location. # 2) Override the releasePath attribute to point to the location of the newly downloaded bundle. # Note: Renoise creates an individual build for each license which screws somewhat with the # use of functions like requireFile as the hash will be different for every user. @@ -15,25 +14,20 @@ in stdenv.mkDerivation rec { pname = "renoise"; - version = "3.1.0"; + version = "3.2.0"; src = if stdenv.hostPlatform.system == "x86_64-linux" then if releasePath == null then - fetchurl { - url = "https://files.renoise.com/demo/Renoise_${urlVersion version}_Demo_x86_64.tar.bz2"; - sha256 = "0pan68fr22xbj7a930y29527vpry3f07q3i9ya4fp6g7aawffsga"; - } + fetchurl { + urls = [ + "https://files.renoise.com/demo/Renoise_${urlVersion version}_Demo_Linux.tar.gz" + "https://web.archive.org/web/https://files.renoise.com/demo/Renoise_${urlVersion version}_Demo_Linux.tar.gz" + ]; + sha256 = "0cfczzpk1ddz61nk4d72fydbm5nbgxqp95v81by2n87s1wffjjhi"; + } else - releasePath - else if stdenv.hostPlatform.system == "i686-linux" then - if releasePath == null then - fetchurl { - url = "http://files.renoise.com/demo/Renoise_${urlVersion version}_Demo_x86.tar.bz2"; - sha256 = "1lccjj4k8hpqqxxham5v01v2rdwmx3c5kgy1p9lqvzqma88k4769"; - } - else - releasePath + releasePath else throw "Platform is not supported by Renoise"; buildInputs = [ alsaLib libjack2 libX11 libXcursor libXext libXrandr ]; @@ -69,6 +63,6 @@ stdenv.mkDerivation rec { homepage = https://www.renoise.com/; license = licenses.unfree; maintainers = []; - platforms = [ "i686-linux" "x86_64-linux" ]; + platforms = [ "x86_64-linux" ]; }; } diff --git a/pkgs/applications/audio/sonata/default.nix b/pkgs/applications/audio/sonata/default.nix index ce2a4e9d2c8..b9293fe2729 100644 --- a/pkgs/applications/audio/sonata/default.nix +++ b/pkgs/applications/audio/sonata/default.nix @@ -2,7 +2,7 @@ , python3Packages, gnome3, gtk3, gsettings-desktop-schemas, gobject-introspection }: let - inherit (python3Packages) buildPythonApplication isPy3k dbus-python pygobject3 mpd2; + inherit (python3Packages) buildPythonApplication isPy3k dbus-python pygobject3 mpd2 setuptools; in buildPythonApplication rec { pname = "sonata"; version = "1.7b1"; @@ -29,7 +29,7 @@ in buildPythonApplication rec { ''; propagatedBuildInputs = [ - gobject-introspection gtk3 pygobject3 + gobject-introspection gtk3 pygobject3 setuptools ]; # The optional tagpy dependency (for editing metadata) is not yet diff --git a/pkgs/applications/audio/whipper/default.nix b/pkgs/applications/audio/whipper/default.nix index 79801f2e99f..ff278d4d7f2 100644 --- a/pkgs/applications/audio/whipper/default.nix +++ b/pkgs/applications/audio/whipper/default.nix @@ -1,24 +1,31 @@ -{ stdenv, fetchFromGitHub, python2, cdparanoia, cdrdao, flac -, sox, accuraterip-checksum, utillinux, substituteAll }: +{ stdenv, fetchFromGitHub, python3, cdparanoia, cdrdao, flac +, sox, accuraterip-checksum, libsndfile, utillinux, substituteAll }: -python2.pkgs.buildPythonApplication rec { - name = "whipper-${version}"; - version = "0.7.3"; +python3.pkgs.buildPythonApplication rec { + pname = "whipper"; + version = "0.9.1.dev7+g${stdenv.lib.substring 0 7 src.rev}"; src = fetchFromGitHub { owner = "whipper-team"; repo = "whipper"; - rev = "v${version}"; - sha256 = "0ypbgc458i7yvbyvg6wg6agz5yzlwm1v6zw7fmyq9h59xsv27mpr"; + rev = "9e95f0604fa30ab06445fe46e3bc93bba6092a05"; + sha256 = "1c2qldw9vxpvdfh5wl6mfcd7zzz3v8r86ffqll311lcp2zin33dg"; }; - pythonPath = with python2.pkgs; [ - pygobject3 musicbrainzngs urllib3 chardet - pycdio setuptools mutagen CDDB + pythonPath = with python3.pkgs; [ + musicbrainzngs + mutagen + pycdio + pygobject3 requests + ruamel_yaml + setuptools + setuptools_scm ]; - checkInputs = with python2.pkgs; [ + buildInputs = [ libsndfile ]; + + checkInputs = with python3.pkgs; [ twisted ]; @@ -33,6 +40,10 @@ python2.pkgs.buildPythonApplication rec { "--prefix" "PATH" ":" (stdenv.lib.makeBinPath [ accuraterip-checksum cdrdao utillinux flac sox ]) ]; + preBuild = '' + export SETUPTOOLS_SCM_PRETEND_VERSION="${version}" + ''; + # some tests require internet access # https://github.com/JoeLametta/whipper/issues/291 doCheck = false; @@ -44,7 +55,7 @@ python2.pkgs.buildPythonApplication rec { meta = with stdenv.lib; { homepage = https://github.com/whipper-team/whipper; description = "A CD ripper aiming for accuracy over speed"; - maintainers = with maintainers; [ rycee ]; + maintainers = with maintainers; [ rycee emily ]; license = licenses.gpl3Plus; platforms = platforms.linux; }; diff --git a/pkgs/applications/blockchains/bitcoin-unlimited.nix b/pkgs/applications/blockchains/bitcoin-unlimited.nix index a75b20b3910..c0d51e66db3 100644 --- a/pkgs/applications/blockchains/bitcoin-unlimited.nix +++ b/pkgs/applications/blockchains/bitcoin-unlimited.nix @@ -7,13 +7,13 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "bitcoin" + (toString (optional (!withGui) "d")) + "-unlimited-" + version; - version = "1.6.0.1"; + version = "1.7.0.0"; src = fetchFromGitHub { owner = "bitcoinunlimited"; repo = "bitcoinunlimited"; rev = "bucash${version}"; - sha256 = "0f0mnal4jf8xdj7w5m4rdlcqkrkbpxi88c006m5k45lmjmj141zr"; + sha256 = "0lil6rivrj4cnr8a7n8zn9rp9f4h2nk88jjxc29m6dwqn5gk6f1i"; }; nativeBuildInputs = [ pkgconfig autoreconfHook python3 ] diff --git a/pkgs/applications/blockchains/bitcoin.nix b/pkgs/applications/blockchains/bitcoin.nix index f3804db48b9..2fa8ea6467c 100644 --- a/pkgs/applications/blockchains/bitcoin.nix +++ b/pkgs/applications/blockchains/bitcoin.nix @@ -3,9 +3,24 @@ , withGui }: with stdenv.lib; -stdenv.mkDerivation rec{ - pname = if withGui then "bitcoin" else "bitcoind"; + +let version = "0.19.0.1"; + majorMinorVersion = versions.majorMinor version; + + desktop = fetchurl { + url = "https://raw.githubusercontent.com/bitcoin-core/packaging/${majorMinorVersion}/debian/bitcoin-qt.desktop"; + sha256 = "0cpna0nxcd1dw3nnzli36nf9zj28d2g9jf5y0zl9j18lvanvniha"; + }; + + pixmap = fetchurl { + url = "https://raw.githubusercontent.com/bitcoin/bitcoin/v${version}/share/pixmaps/bitcoin128.png"; + sha256 = "08p7j7dg50jlj783kkgdw037klmx0spqjikaprmbkzgcb620r25d"; + }; + +in stdenv.mkDerivation rec { + pname = if withGui then "bitcoin" else "bitcoind"; + inherit version; src = fetchurl { urls = [ "https://bitcoincore.org/bin/bitcoin-core-${version}/bitcoin-${version}.tar.gz" @@ -22,6 +37,11 @@ stdenv.mkDerivation rec{ ++ optionals stdenv.isLinux [ utillinux ] ++ optionals withGui [ qtbase qttools qrencode ]; + postInstall = optional withGui '' + install -Dm644 ${desktop} $out/share/applications/bitcoin-qt.desktop + install -Dm644 ${pixmap} $out/share/pixmaps/bitcoin128.png + ''; + configureFlags = [ "--with-boost-libdir=${boost.out}/lib" "--disable-bench" ] ++ optionals (!doCheck) [ diff --git a/pkgs/applications/blockchains/go-ethereum.nix b/pkgs/applications/blockchains/go-ethereum.nix index cfdb8dbdc60..34cfe868c0b 100644 --- a/pkgs/applications/blockchains/go-ethereum.nix +++ b/pkgs/applications/blockchains/go-ethereum.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "go-ethereum"; - version = "1.9.8"; + version = "1.9.9"; src = fetchFromGitHub { owner = "ethereum"; repo = pname; rev = "v${version}"; - sha256 = "0v4hchy6h3282347ps11iv7klcr60bmghha78rnp0iqpx2k8pqb4"; + sha256 = "00fhqn0b9grqz8iigzbijg7b1va58vccjb15fpy6yfr301z3ib1q"; }; - modSha256 = "1l10p6a4qq77pfx7jmipkcg2qg6w3hg83q5a37yid3apily2scfa"; + modSha256 = "1rn1x3qc23wfcx9c61sw1sc6iqwvv2b9pv006lk1az4zbwh09dbm"; subPackages = [ "cmd/abigen" diff --git a/pkgs/applications/blockchains/monero/default.nix b/pkgs/applications/blockchains/monero/default.nix index b526fb61a62..7eb4238679e 100644 --- a/pkgs/applications/blockchains/monero/default.nix +++ b/pkgs/applications/blockchains/monero/default.nix @@ -10,13 +10,13 @@ assert stdenv.isDarwin -> IOKit != null; stdenv.mkDerivation rec { pname = "monero"; - version = "0.15.0.0"; + version = "0.15.0.1"; src = fetchFromGitHub { owner = "monero-project"; repo = "monero"; rev = "v${version}"; - sha256 = "19y4kcj4agws7swfa3draysb1y18c3xb13r8cg0faxx1dlm0zbnr"; + sha256 = "0sypa235lf2bbib4b71xpaw39h9304slgsvnsz8wmy9fq1zx009m"; fetchSubmodules = true; }; diff --git a/pkgs/applications/blockchains/parity/beta.nix b/pkgs/applications/blockchains/parity/beta.nix index c9da6f0e7a8..ffa509d2320 100644 --- a/pkgs/applications/blockchains/parity/beta.nix +++ b/pkgs/applications/blockchains/parity/beta.nix @@ -1,6 +1,6 @@ let - version = "2.6.5"; - sha256 = "1ykrsphqil68051wwp9b0259gsmfrj9xmx0pfhh2yvmmjzv7k4fv"; + version = "2.6.6"; + sha256 = "1gx5qg9c588d5m564bnbly86663yrzb2hmlgv9zplwba7p0lpphl"; cargoSha256 = "1xqmnirx2r91q5gy1skxl0f79xvaqzimq3l0cj4xvfms7mpdfbg1"; in import ./parity.nix { inherit version sha256 cargoSha256; } diff --git a/pkgs/applications/blockchains/parity/default.nix b/pkgs/applications/blockchains/parity/default.nix index ba3491e084d..1b5870b429b 100644 --- a/pkgs/applications/blockchains/parity/default.nix +++ b/pkgs/applications/blockchains/parity/default.nix @@ -1,6 +1,6 @@ let - version = "2.5.10"; - sha256 = "0s8llcb1xdzs2zb6rnbsa9hck7dj4m8mamzkkvr0xjmgvigskf64"; + version = "2.5.11"; + sha256 = "1x2p559g2f30520v3kn46n737l5s1kwrn962dv73s6mb6n1lhs55"; cargoSha256 = "16nf6y0hyffwdhxn1w4ms4zycs5lkzir8sj6c2lgsabig057hb6z"; in import ./parity.nix { inherit version sha256 cargoSha256; } diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix index 5c796e71fdf..fcd15355a10 100644 --- a/pkgs/applications/editors/android-studio/default.nix +++ b/pkgs/applications/editors/android-studio/default.nix @@ -8,19 +8,19 @@ let inherit (gnome2) GConf gnome_vfs; }; stableVersion = { - version = "3.5.2.0"; # "Android Studio 3.5.2" - build = "191.5977832"; - sha256Hash = "0kcd6kd5rn4b76damkfddin18d1r0dck05piv8mq1ns7x1n4hf7q"; + version = "3.5.3.0"; # "Android Studio 3.5.3" + build = "191.6010548"; + sha256Hash = "1nsm4d3vdx90szqd78a8mjq65xc9m5ipd35cqrlx3c3ny900sqxg"; }; betaVersion = { - version = "3.6.0.16"; # "Android Studio 3.6 Beta 4" - build = "192.5994180"; - sha256Hash = "0wyyr6r0jzb1l4rn1mfgp0nnzvgk3x62imq629z6vrdbymy8psf1"; + version = "3.6.0.18"; # "Android Studio 3.6 RC 1" + build = "192.6071332"; + sha256Hash = "0xpcihr5xxr9l1kv6aflywshs8fww3s7di0g98mz475whhxwzf3q"; }; latestVersion = { # canary & dev - version = "4.0.0.4"; # "Android Studio 4.0 Canary 4" - build = "192.6008643"; - sha256Hash = "1z1srginlg1xnp911nlilhf515mbpmngwhln29q6lxsir8g2cw2z"; + version = "4.0.0.6"; # "Android Studio 4.0 Canary 6" + build = "193.6052267"; + sha256Hash = "1naxyfnrj7milqha7xbwbcvyi81a7fqb7jsm03hhq5xs2sw55m1c"; }; in { # Attributes are named by their corresponding release channels diff --git a/pkgs/applications/editors/edbrowse/default.nix b/pkgs/applications/editors/edbrowse/default.nix index 0de514233f8..1161fc8256c 100644 --- a/pkgs/applications/editors/edbrowse/default.nix +++ b/pkgs/applications/editors/edbrowse/default.nix @@ -1,19 +1,11 @@ -{ stdenv, fetchFromGitHub, fetchpatch, duktape, curl, pcre, readline, openssl, perl, html-tidy }: +{ stdenv, fetchFromGitHub, duktape, curl, pcre, readline, openssl, perl, html-tidy }: stdenv.mkDerivation rec { pname = "edbrowse"; - version = "3.7.4"; + version = "3.7.6"; buildInputs = [ curl pcre readline openssl duktape perl html-tidy ]; - patches = [ - # Fix build against recent libcurl - (fetchpatch { - url = https://github.com/CMB/edbrowse/commit/5d2b9e21fdf019f461ebe62738d615428d5db963.diff; - sha256 = "167q8n0syj3iv6lxrbpv4kvb63j4byj4qxrxayy08bah3pss3gky"; - }) - ]; - postPatch = '' for i in ./tools/*.pl do @@ -21,13 +13,16 @@ stdenv.mkDerivation rec { done ''; - makeFlags = "-C src prefix=$(out)"; + makeFlags = [ + "-C src" + "prefix=${placeholder "out"}" + ]; src = fetchFromGitHub { owner = "CMB"; repo = "edbrowse"; rev = "v${version}"; - sha256 = "0i9ivyfy1dd16c89f392kwx6wxgkkpyq2hl32jhzra0fb0zyl0k6"; + sha256 = "0yk4djb9q8ll94fs57y706bsqlar4pfx6ysasvkzj146926lrh8a"; }; meta = with stdenv.lib; { description = "Command Line Editor Browser"; @@ -39,8 +34,8 @@ stdenv.mkDerivation rec { edbrowse can also tap into databases through odbc. It was primarily written by Karl Dahlke. ''; license = licenses.gpl1Plus; - homepage = http://edbrowse.org/; - maintainers = [ maintainers.schmitthenner maintainers.vrthra ]; + homepage = "https://edbrowse.org/"; + maintainers = with maintainers; [ schmitthenner vrthra equirosa ]; platforms = platforms.linux; }; } diff --git a/pkgs/applications/editors/emacs-modes/org-generated.nix b/pkgs/applications/editors/emacs-modes/org-generated.nix index f1833225013..8d70794a754 100644 --- a/pkgs/applications/editors/emacs-modes/org-generated.nix +++ b/pkgs/applications/editors/emacs-modes/org-generated.nix @@ -4,10 +4,10 @@ elpaBuild { pname = "org"; ename = "org"; - version = "20190904"; + version = "20191203"; src = fetchurl { - url = "http://orgmode.org/elpa/org-20190904.tar"; - sha256 = "0ah5zgbxp4j3mfgriw9liamy73npp9zbkq0zrg6cfhf8l3xwbnxn"; + url = "http://orgmode.org/elpa/org-20191203.tar"; + sha256 = "1fcgiswjnqmfzx3xkmlqyyhc4a8ms07vdsv7nkizgxqdh9hwfm2q"; }; packageRequires = []; meta = { @@ -19,10 +19,10 @@ elpaBuild { pname = "org-plus-contrib"; ename = "org-plus-contrib"; - version = "20190904"; + version = "20191203"; src = fetchurl { - url = "http://orgmode.org/elpa/org-plus-contrib-20190904.tar"; - sha256 = "08s3fk3jim0y2v00l6ah8y08ba8wbcf29z6fxqzyaxj58a5sq81a"; + url = "http://orgmode.org/elpa/org-plus-contrib-20191203.tar"; + sha256 = "1kvw95492acb7gqn8gxbp1vg4fyw80w43yvflxnfxdf6jnnw2wah"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/emacs/25.nix b/pkgs/applications/editors/emacs/25.nix index 76009370473..42edb7c707e 100644 --- a/pkgs/applications/editors/emacs/25.nix +++ b/pkgs/applications/editors/emacs/25.nix @@ -1,13 +1,13 @@ -{ stdenv, lib, fetchurl, ncurses, xlibsWrapper, libXaw, libXpm, Xaw3d +{ stdenv, lib, fetchurl, ncurses, xlibsWrapper, libXaw, libXpm, Xaw3d, fetchpatch , pkgconfig, gettext, libXft, dbus, libpng, libjpeg, libungif , libtiff, librsvg, gconf, libxml2, imagemagick, gnutls, libselinux , alsaLib, cairo, acl, gpm, AppKit, GSS, ImageIO , withX ? !stdenv.isDarwin , withGTK2 ? false, gtk2 ? null , withGTK3 ? true, gtk3 ? null, gsettings-desktop-schemas ? null -, withXwidgets ? false, webkitgtk24x-gtk3 ? null, wrapGAppsHook ? null, glib-networking ? null +, withXwidgets ? false, webkitgtk, wrapGAppsHook ? null, glib-networking ? null , withCsrc ? true -, srcRepo ? false, autoconf ? null, automake ? null, texinfo ? null +, autoconf ? null, automake ? null, texinfo ? null }: assert (libXft != null) -> libpng != null; # probably a bug @@ -16,7 +16,7 @@ assert withGTK2 -> withX || stdenv.isDarwin; assert withGTK3 -> withX || stdenv.isDarwin; assert withGTK2 -> !withGTK3 && gtk2 != null; assert withGTK3 -> !withGTK2 && gtk3 != null; -assert withXwidgets -> withGTK3 && webkitgtk24x-gtk3 != null; +assert withXwidgets -> withGTK3 && webkitgtk != null; let toolkit = @@ -46,10 +46,21 @@ stdenv.mkDerivation rec { url = "https://gist.githubusercontent.com/aaronjensen/f45894ddf431ecbff78b1bcf533d3e6b/raw/6a5cd7f57341aba673234348d8b0d2e776f86719/Emacs-25-OS-X-use-vfork.patch"; sha256 = "1nlsxiaynswqhy99jf4mw9x0sndhwcrwy8713kq1l3xqv9dbrzgj"; }) + ] ++ [ + # Backport patches so we can use webkitgtk with xwidgets. + (fetchpatch { + name = "0001-Omit-unnecessary-includes-from-xwidget-c.patch"; + url = "https://github.com/emacs-mirror/emacs/commit/a36ed9b5e95afea5716256bac24d883263aefbaf.patch"; + sha256 = "1j34c0vkj87il87xy1px23yk6bw73adpr7wqa79ncj89i4lc8qkb"; + }) + (fetchpatch { + name = "0002-xwidget-Use-WebKit2-API.patch"; + url = "https://github.com/emacs-mirror/emacs/commit/d781662873f228b110a128f7a2b6583a4d5e0a3a.patch"; + sha256 = "1lld56zi4cw2hmjxhhdcc0f07k8lbj32h10wcq4ml3asdwa31ryr"; + }) ]; - nativeBuildInputs = [ pkgconfig ] - ++ lib.optionals srcRepo [ autoconf automake texinfo ] + nativeBuildInputs = [ pkgconfig autoconf automake texinfo ] ++ lib.optional (withX && (withGTK3 || withXwidgets)) wrapGAppsHook; buildInputs = @@ -61,7 +72,7 @@ stdenv.mkDerivation rec { ++ lib.optional (withX && withGTK2) gtk2 ++ lib.optionals (withX && withGTK3) [ gtk3 gsettings-desktop-schemas ] ++ lib.optional (stdenv.isDarwin && withX) cairo - ++ lib.optionals (withX && withXwidgets) [ webkitgtk24x-gtk3 glib-networking ] + ++ lib.optionals (withX && withXwidgets) [ webkitgtk glib-networking ] ++ lib.optionals stdenv.isDarwin [ AppKit GSS ImageIO ]; hardeningDisable = [ "format" ]; @@ -75,7 +86,7 @@ stdenv.mkDerivation rec { "--with-gif=no" "--with-tiff=no" ]) ++ lib.optional withXwidgets "--with-xwidgets"; - preConfigure = lib.optionalString srcRepo '' + preConfigure = '' ./autogen.sh '' + '' substituteInPlace lisp/international/mule-cmds.el \ diff --git a/pkgs/applications/editors/emacs/macport.nix b/pkgs/applications/editors/emacs/macport.nix index 649997171e9..e9307c7e80b 100644 --- a/pkgs/applications/editors/emacs/macport.nix +++ b/pkgs/applications/editors/emacs/macport.nix @@ -4,10 +4,12 @@ }: stdenv.mkDerivation rec { - emacsVersion = "26.3"; - emacsName = "emacs-${emacsVersion}"; + pname = "emacs"; + version = "26.3"; + + emacsName = "emacs-${version}"; macportVersion = "7.7"; - name = "emacs-mac-${emacsVersion}-${macportVersion}"; + name = "emacs-mac-${version}-${macportVersion}"; src = fetchurl { url = "mirror://gnu/emacs/${emacsName}.tar.xz"; diff --git a/pkgs/applications/editors/geany/default.nix b/pkgs/applications/editors/geany/default.nix index 1e1a817f092..d3cc3624419 100644 --- a/pkgs/applications/editors/geany/default.nix +++ b/pkgs/applications/editors/geany/default.nix @@ -1,36 +1,51 @@ -{ stdenv, fetchurl, gtk2, which, pkgconfig, intltool, file, libintl, hicolor-icon-theme }: - -with stdenv.lib; - -let - version = "1.36"; -in +{ stdenv +, fetchurl +, gtk3 +, which +, pkgconfig +, intltool +, file +, libintl +, hicolor-icon-theme +, wrapGAppsHook +}: stdenv.mkDerivation rec { pname = "geany"; - inherit version; + version = "1.36"; + + outputs = [ "out" "dev" "doc" "man" ]; src = fetchurl { url = "https://download.geany.org/${pname}-${version}.tar.bz2"; sha256 = "0gnm17cr4rf3pmkf0axz4a0fxwnvp55ji0q0lzy88yqbshyxv14i"; }; - nativeBuildInputs = [ pkgconfig intltool libintl ]; - buildInputs = [ gtk2 which file hicolor-icon-theme ]; + nativeBuildInputs = [ + pkgconfig + intltool + libintl + which + file + hicolor-icon-theme + wrapGAppsHook + ]; + + buildInputs = [ + gtk3 + ]; doCheck = true; enableParallelBuilding = true; - patchPhase = "patchShebangs ."; - - meta = { + meta = with stdenv.lib; { description = "Small and lightweight IDE"; longDescription = '' Geany is a small and lightweight Integrated Development Environment. It was developed to provide a small and fast IDE, which has only a few dependencies from other packages. Another goal was to be as independent as possible from a special Desktop Environment like KDE or GNOME. - Geany only requires the GTK2 runtime libraries. + Geany only requires the GTK runtime libraries. Some basic features of Geany: - Syntax highlighting - Code folding @@ -45,7 +60,7 @@ stdenv.mkDerivation rec { - Simple project management - Plugin interface ''; - homepage = https://www.geany.org/; + homepage = "https://www.geany.org/"; license = licenses.gpl2; maintainers = with maintainers; [ frlan ]; platforms = platforms.all; diff --git a/pkgs/applications/editors/geany/with-vte.nix b/pkgs/applications/editors/geany/with-vte.nix index f7351454fb8..ece5c95f05a 100644 --- a/pkgs/applications/editors/geany/with-vte.nix +++ b/pkgs/applications/editors/geany/with-vte.nix @@ -1,8 +1,24 @@ -{ runCommand, makeWrapper, geany, gnome2 }: -let name = builtins.replaceStrings ["geany-"] ["geany-with-vte-"] geany.name; -in -runCommand name { nativeBuildInputs = [ makeWrapper ]; inherit (geany.meta); } " - mkdir -p $out - ln -s ${geany}/share $out - makeWrapper ${geany}/bin/geany $out/bin/geany --prefix LD_LIBRARY_PATH : ${gnome2.vte}/lib -" +{ symlinkJoin +, makeWrapper +, geany +, lndir +, vte +}: + +symlinkJoin { + name = "geany-with-vte-${geany.version}"; + + # TODO: add geany-plugins + paths = with geany; [ out doc man ]; + + nativeBuildInputs = [ makeWrapper ]; + + postBuild = '' + # need to replace the directory since it is a symlink + rm -r $out/bin; mkdir $out/bin + makeWrapper ${geany}/bin/geany $out/bin/geany \ + --prefix LD_LIBRARY_PATH : ${vte}/lib + ''; + + inherit (geany.meta); +} diff --git a/pkgs/applications/editors/gnome-builder/default.nix b/pkgs/applications/editors/gnome-builder/default.nix index 6ac2c6d4964..bda0552e752 100644 --- a/pkgs/applications/editors/gnome-builder/default.nix +++ b/pkgs/applications/editors/gnome-builder/default.nix @@ -5,6 +5,7 @@ , docbook_xsl , docbook_xml_dtd_43 , fetchurl +, fetchpatch , flatpak , gnome3 , libgit2-glib @@ -45,6 +46,18 @@ stdenv.mkDerivation rec { sha256 = "19018pq94cxf6fywd7fsmy98x56by5zfmh140pl530gaaw84cvhb"; }; + patches = [ + # Fix build with Meson 0.52 + (fetchpatch { + url = "https://gitlab.gnome.org/GNOME/gnome-builder/commit/c8b862b491cfbbb4f79b24d7cd90e4fb1f37cb9f.patch"; + sha256 = "0n8kg7nnjqmbnyag1ps6dvrlqrxc94djjncqx10d6y7ijwdxf4w8"; + }) + (fetchpatch { + url = "https://gitlab.gnome.org/GNOME/gnome-builder/commit/da26dfbf78468f5ed724e022b300a07862a95833.patch"; + sha256 = "0psa65bzjpjj7vc5rknv2w2dz3p50jjv10s6j2fd6lpw8j2800k4"; + }) + ]; + nativeBuildInputs = [ appstream-glib desktop-file-utils diff --git a/pkgs/applications/editors/kakoune/default.nix b/pkgs/applications/editors/kakoune/default.nix index 065657d16e2..a6580581f85 100644 --- a/pkgs/applications/editors/kakoune/default.nix +++ b/pkgs/applications/editors/kakoune/default.nix @@ -4,12 +4,12 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "kakoune-unwrapped"; - version = "2019.07.01"; + version = "2019.12.10"; src = fetchFromGitHub { repo = "kakoune"; owner = "mawww"; rev = "v${version}"; - sha256 = "0jdkldq5rygzc0wcxr1j4fmp2phciy8602ghhf6xq21a9bq2v639"; + sha256 = "0cb3ndlczxvxnzb91s4idxx0cy30mnrc4znsbjpnch68fvpm0x2f"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ ncurses asciidoc docbook_xsl libxslt ]; diff --git a/pkgs/applications/editors/nano/default.nix b/pkgs/applications/editors/nano/default.nix index 6f29946d77a..7b2992201fc 100644 --- a/pkgs/applications/editors/nano/default.nix +++ b/pkgs/applications/editors/nano/default.nix @@ -38,6 +38,15 @@ in stdenv.mkDerivation rec { (stdenv.lib.enableFeature enableTiny "tiny") ]; + patches = [ + (fetchurl { + # fix compilation on macOS, where 'st_mtim' is unknown + # upstream patch not in 4.6 + url = "https://git.savannah.gnu.org/cgit/nano.git/patch/?id=f516cddce749c3bf938271ef3182b9169ac8cbcc"; + sha256 = "0gqymvr5vxxypr7y3sm252rsi4gjqp597l01x0lkxyvxsn45a4sx"; + }) + ]; + postInstall = '' cp ${nixSyntaxHighlight}/nix.nanorc $out/share/nano/ ''; diff --git a/pkgs/applications/editors/vim/common.nix b/pkgs/applications/editors/vim/common.nix index 0a099ea630d..ceecfa73ce4 100644 --- a/pkgs/applications/editors/vim/common.nix +++ b/pkgs/applications/editors/vim/common.nix @@ -1,12 +1,12 @@ { lib, fetchFromGitHub }: rec { - version = "8.1.2237"; + version = "8.1.2407"; src = fetchFromGitHub { owner = "vim"; repo = "vim"; rev = "v${version}"; - sha256 = "1qwh3cw5zmjmnk07g0nc8nz8k5nlq9ilvvygnfdjy1fqg69q8p0h"; + sha256 = "1h23lncm8py0ip8p61y8hivmnd8fzf8xpwpkd73d3a3fpiyd2yx8"; }; enableParallelBuilding = true; diff --git a/pkgs/applications/editors/vscode/vscode.nix b/pkgs/applications/editors/vscode/vscode.nix index f914c90dd79..9abee88d8b0 100644 --- a/pkgs/applications/editors/vscode/vscode.nix +++ b/pkgs/applications/editors/vscode/vscode.nix @@ -11,13 +11,13 @@ let archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz"; sha256 = { - x86_64-linux = "1zxj1vav7swjmvvgcn1y61figjhqrczf8d16rk6yayja1pfjgvs5"; - x86_64-darwin = "0f6ck40rkngzcm5xih1rbwpz905r533n2z08maycgf4iajgwrn43"; + x86_64-linux = "1ziw2b851kg17jaf713nwhsv5ikbvivq3h01xximhcglv9vzk93l"; + x86_64-darwin = "0nndasa130551jf06mfrym593c02c3ypgg9f9rdg1fw5qbyjb8hm"; }.${system}; in callPackage ./generic.nix rec { - version = "1.40.1"; + version = "1.41.0"; pname = "vscode"; executableName = "code" + lib.optionalString isInsiders "-insiders"; diff --git a/pkgs/applications/editors/vscode/vscodium.nix b/pkgs/applications/editors/vscode/vscodium.nix index b8010cab181..310d839088d 100644 --- a/pkgs/applications/editors/vscode/vscodium.nix +++ b/pkgs/applications/editors/vscode/vscodium.nix @@ -11,8 +11,8 @@ let archive_fmt = if system == "x86_64-darwin" then "zip" else "tar.gz"; sha256 = { - x86_64-linux = "0yi1ghliivhb50153dvv9q5gbbgh2dd1m3xrl1i097b3phrzb0j4"; - x86_64-darwin = "1slf4h8yhhzlr6cm839y3zx7k831zl24xasi88z6xvib32rh9qxs"; + x86_64-linux = "1njxa19mzzydz1jacghwmha3dl4a13m9xzzwsb0rbks5zc9a0v7m"; + x86_64-darwin = "0cpd87q0q3i172l4s43s79by42wa9k5pyik3v2z5mq8zpms8qcq4"; }.${system}; sourceRoot = { @@ -23,7 +23,7 @@ in callPackage ./generic.nix rec { inherit sourceRoot; - version = "1.40.0"; + version = "1.41.0"; pname = "vscodium"; executableName = "codium"; diff --git a/pkgs/applications/gis/grass/default.nix b/pkgs/applications/gis/grass/default.nix index 562a5e616a3..4000c834602 100644 --- a/pkgs/applications/gis/grass/default.nix +++ b/pkgs/applications/gis/grass/default.nix @@ -24,6 +24,11 @@ stdenv.mkDerivation rec { # directory patches = [ ./no_symbolic_links.patch ]; + # Correct mysql_config query + patchPhase = '' + substituteInPlace configure --replace "--libmysqld-libs" "--libs" + ''; + configureFlags = [ "--with-proj-share=${proj}/share/proj" "--with-proj-includes=${proj.dev}/include" diff --git a/pkgs/applications/graphics/cinepaint/default.nix b/pkgs/applications/graphics/cinepaint/default.nix deleted file mode 100644 index 2b70ea3b450..00000000000 --- a/pkgs/applications/graphics/cinepaint/default.nix +++ /dev/null @@ -1,38 +0,0 @@ -{ stdenv, fetchurl, cmake, pkgconfig, gtk2, freetype, fontconfig, lcms, - flex, libtiff, libjpeg, libpng, libexif, zlib, perlPackages, libX11, - pythonPackages, gettext, intltool, babl, gegl, - glib, makedepend, xorgproto, libXmu, openexr, - libGLU, libGL, libXext, libXpm, libXau, libXxf86vm, pixman, libpthreadstubs, fltk } : - -let - inherit (pythonPackages) python pygtk; -in stdenv.mkDerivation rec { - name = "cinepaint-1.1"; - - src = fetchurl { - url = "mirror://sourceforge/cinepaint/${name}.tgz"; - sha256 = "0b5g4bkq62yiz1cnb2vfij0a8fw5w5z202v5dm4dh89k7cj0yq4w"; - }; - - buildInputs = [ libpng gtk2 freetype fontconfig lcms flex libtiff libjpeg - libexif zlib libX11 python pygtk gettext intltool babl - gegl glib makedepend xorgproto libXmu openexr libGLU libGL - libXext libXpm libXau libXxf86vm pixman libpthreadstubs fltk - ] ++ (with perlPackages; [ perl XMLParser ]); - - hardeningDisable = [ "format" ]; - - patches = [ ./install.patch ]; - - nativeBuildInputs = [ cmake pkgconfig ]; - - NIX_LDFLAGS = "-lm -llcms -ljpeg -lpng -lX11"; - - meta = { - homepage = http://www.cinepaint.org/; - license = stdenv.lib.licenses.free; - description = "Image editor which supports images over 8bpp and ICC profiles"; - maintainers = with stdenv.lib.maintainers; [viric]; - platforms = stdenv.lib.platforms.linux; - }; -} diff --git a/pkgs/applications/graphics/cinepaint/install.patch b/pkgs/applications/graphics/cinepaint/install.patch deleted file mode 100644 index f15ff1c4414..00000000000 --- a/pkgs/applications/graphics/cinepaint/install.patch +++ /dev/null @@ -1,24 +0,0 @@ -diff --git a/CMakeLists.txt b/CMakeLists.txt -index dfb182f..5adaaa5 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -138,7 +138,7 @@ STRING(REPLACE "/" "\\/" ESCAPEDPREFIX ${PREFIX}) - # Note that for MacOS this needs to be revised - # for the @OSX_ICC...@ variables - ADD_CUSTOM_COMMAND( -- OUTPUT ${CMAKE_CURRENT_SOURCE_DIR}/gimprc -+ OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/gimprc - COMMAND sed -e s/\@platform\@//g - -e s/\@prefix\@/${ESCAPEDPREFIX}/g - -e s/\@exec_prefix\@/\${prefix}/g -@@ -155,8 +155,8 @@ ADD_CUSTOM_COMMAND( - - ADD_CUSTOM_TARGET(RCFile ALL echo - "" -- DEPENDS ${CMAKE_CURRENT_SOURCE_DIR}/user_install -- ${CMAKE_CURRENT_SOURCE_DIR}/gimprc -+ DEPENDS ${CMAKE_CURRENT_BINARY_DIR}/user_install -+ ${CMAKE_CURRENT_BINARY_DIR}/gimprc - ) - - diff --git a/pkgs/applications/graphics/digikam/default.nix b/pkgs/applications/graphics/digikam/default.nix index 1d9b06de29f..e6e24e0e56f 100644 --- a/pkgs/applications/graphics/digikam/default.nix +++ b/pkgs/applications/graphics/digikam/default.nix @@ -9,7 +9,7 @@ , qtwebengine , akonadi-contacts -, kcalcore +, kcalendarcore , kconfigwidgets , kcoreaddons , kdoctools @@ -89,7 +89,7 @@ mkDerivation rec { qtwebengine akonadi-contacts - kcalcore + kcalendarcore kconfigwidgets kcoreaddons kfilemetadata diff --git a/pkgs/applications/graphics/drawio/default.nix b/pkgs/applications/graphics/drawio/default.nix index 548b004d794..c71e95b21af 100644 --- a/pkgs/applications/graphics/drawio/default.nix +++ b/pkgs/applications/graphics/drawio/default.nix @@ -11,11 +11,11 @@ stdenv.mkDerivation rec { pname = "drawio"; - version = "12.3.2"; + version = "12.4.2"; src = fetchurl { url = "https://github.com/jgraph/drawio-desktop/releases/download/v${version}/draw.io-x86_64-${version}.rpm"; - sha256 = "1hh4616dbq0fqldlph7vyl8vkibwc3xpcv9r1m2v949kn84yi2j3"; + sha256 = "1mngn90cn9hixa0xkhk7mb02gjp480wnipjy2jzkq8kwpai1gm1m"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/graphics/drawpile/default.nix b/pkgs/applications/graphics/drawpile/default.nix index c284f15a874..e64e384a9a7 100644 --- a/pkgs/applications/graphics/drawpile/default.nix +++ b/pkgs/applications/graphics/drawpile/default.nix @@ -60,11 +60,11 @@ let in mkDerivation rec { pname = "drawpile"; - version = "2.1.14"; + version = "2.1.15"; src = fetchurl { url = "https://drawpile.net/files/src/drawpile-${version}.tar.gz"; - sha256 = "0vpsq8swvli6xiykjqjmdcz33jd44nvhq1n350dm9qap9s9wdr47"; + sha256 = "0w6bdg1rnnjzjg8xzqv3a9qhw41q41sjvp6f8m0sqxjfax05lqin"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/graphics/feh/default.nix b/pkgs/applications/graphics/feh/default.nix index 50814f23962..de7d76ec45f 100644 --- a/pkgs/applications/graphics/feh/default.nix +++ b/pkgs/applications/graphics/feh/default.nix @@ -6,11 +6,11 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "feh"; - version = "3.2.1"; + version = "3.3"; src = fetchurl { url = "https://feh.finalrewind.org/${pname}-${version}.tar.bz2"; - sha256 = "070axq8jpibcabmjfv4fmjmpk3k349vzvh4qhsi4n62bkcwl35wg"; + sha256 = "04c8cgwzkax481sz7lbzy23mk79bqmjy3qpvr7vxa4c14mc9k5gk"; }; outputs = [ "out" "man" "doc" ]; diff --git a/pkgs/applications/graphics/gscan2pdf/default.nix b/pkgs/applications/graphics/gscan2pdf/default.nix index 9db6281b341..f8d50a7c798 100644 --- a/pkgs/applications/graphics/gscan2pdf/default.nix +++ b/pkgs/applications/graphics/gscan2pdf/default.nix @@ -10,11 +10,11 @@ with stdenv.lib; perlPackages.buildPerlPackage rec { pname = "gscan2pdf"; - version = "2.5.6"; + version = "2.6.2"; src = fetchurl { url = "mirror://sourceforge/gscan2pdf/${version}/${pname}-${version}.tar.xz"; - sha256 = "0wp81nsi5jfypabwmjqiamxr739jq5ij79n5fzn5pbw1hg5gcmfz"; + sha256 = "0z35lglf4anfczizynjp8sd1jpix5mkmm1nh39n1v94l7ahjxsww"; }; nativeBuildInputs = [ wrapGAppsHook ]; diff --git a/pkgs/applications/graphics/mandelbulber/default.nix b/pkgs/applications/graphics/mandelbulber/default.nix new file mode 100644 index 00000000000..0a3368ec2ab --- /dev/null +++ b/pkgs/applications/graphics/mandelbulber/default.nix @@ -0,0 +1,64 @@ +{ lib +, mkDerivation +, fetchFromGitHub +, libpng +, gsl +, libsndfile +, lzo +, qmake +, qttools +, qtbase +, qtmultimedia +, withOpenCL ? true +, opencl-clhpp ? null +, ocl-icd ? null +}: + +assert withOpenCL -> opencl-clhpp != null; +assert withOpenCL -> ocl-icd != null; + +mkDerivation rec { + pname = "mandelbulber"; + version = "2.20"; + + src = fetchFromGitHub { + owner = "buddhi1980"; + repo = "mandelbulber2"; + rev = version; + sha256 = "043dks9fimhradyhdzqdc6lb9z0x9lkj3szj10751g424lppp207"; + }; + + nativeBuildInputs = [ + qmake + qttools + ]; + buildInputs = [ + qtbase + qtmultimedia + libpng + gsl + libsndfile + lzo + ] ++ lib.optionals withOpenCL [ + opencl-clhpp + ocl-icd + ]; + + sourceRoot = "${src.name}/mandelbulber2"; + + qmakeFlags = [ + "SHARED_PATH=${placeholder ''out''}" + (if withOpenCL + then "qmake/mandelbulber-opencl.pro" + else "qmake/mandelbulber.pro") + ]; + + meta = with lib; { + description = "A 3D fractal rendering engine"; + longDescription = "Mandelbulber creatively generates three-dimensional fractals. Explore trigonometric, hyper-complex, Mandelbox, IFS, and many other 3D fractals."; + homepage = "https://mandelbulber.com"; + license = licenses.gpl3; + platforms = platforms.linux; + maintainers = with maintainers; [ kovirobi ]; + }; +} diff --git a/pkgs/applications/graphics/mcomix/default.nix b/pkgs/applications/graphics/mcomix/default.nix deleted file mode 100644 index c16c0d88b46..00000000000 --- a/pkgs/applications/graphics/mcomix/default.nix +++ /dev/null @@ -1,34 +0,0 @@ -{ stdenv, fetchurl, python27Packages }: - -python27Packages.buildPythonApplication rec { - name = "mcomix-${version}"; - version = "1.2.1"; - - src = fetchurl { - url = "mirror://sourceforge/mcomix/${name}.tar.bz2"; - sha256 = "0fzsf9pklhfs1rzwzj64c0v30b74nk94p93h371rpg45qnfiahvy"; - }; - - propagatedBuildInputs = with python27Packages; [ pygtk pillow setuptools ]; - - doCheck = false; - - meta = { - description = "Image viewer designed to handle comic books"; - longDescription = '' - MComix is an user-friendly, customizable image viewer. It is specifically - designed to handle comic books, but also serves as a generic viewer. - It reads images in ZIP, RAR, 7Zip or tar archives as well as plain image - files. It is written in Python and uses GTK through the PyGTK bindings, - and runs on both Linux and Windows. - - MComix is a fork of the Comix project, and aims to add bug fixes and - stability improvements after Comix development came to a halt in late 2009. - ''; - homepage = http://mcomix.sourceforge.net/; - license = stdenv.lib.licenses.gpl2; - maintainers = with stdenv.lib.maintainers; [ AndersonTorres ]; - }; -} -# TODO: -# - error in check phase diff --git a/pkgs/applications/graphics/mirage/default.nix b/pkgs/applications/graphics/mirage/default.nix deleted file mode 100644 index fbe8f10c72f..00000000000 --- a/pkgs/applications/graphics/mirage/default.nix +++ /dev/null @@ -1,31 +0,0 @@ -{ stdenv, fetchurl, pythonPackages, libX11, gettext }: - -pythonPackages.buildPythonApplication rec { - pname = "mirage"; - version = "0.9.5.2"; - - src = fetchurl { - url = "mirror://sourceforge/mirageiv/${pname}-${version}.tar.bz2"; - sha256 = "d214a1b6d99d1d1e83da5848a2cef181f6781e0990e93f7ebff5880b0c43f43c"; - }; - - doCheck = false; - - nativeBuildInputs = [ gettext ]; - - buildInputs = [ stdenv libX11 gettext ]; - - patchPhase = '' - sed -i "s@/usr/local/share/locale@$out/share/locale@" mirage.py - ''; - - propagatedBuildInputs = with pythonPackages; [ pygtk pillow ]; - - meta = { - description = "Simple image viewer written in PyGTK"; - - homepage = http://mirageiv.sourceforge.net/; - - license = stdenv.lib.licenses.gpl2; - }; -} diff --git a/pkgs/applications/graphics/pick-colour-picker/default.nix b/pkgs/applications/graphics/pick-colour-picker/default.nix new file mode 100644 index 00000000000..e34d5a87a47 --- /dev/null +++ b/pkgs/applications/graphics/pick-colour-picker/default.nix @@ -0,0 +1,66 @@ +{ stdenv +, fetchFromGitHub +, buildPythonPackage +, pygobject3 +, pycairo +, glib +, gtk3 +, gobject-introspection +, wrapGAppsHook +, python +}: + +buildPythonPackage rec { + pname = "pick-colour-picker"; + version = "unstable-2019-10-11"; # "1.5.0-3ec940" + + src = fetchFromGitHub { + owner = "stuartlangridge"; + repo = "ColourPicker"; + rev = "3ec9406d787ce373f6db0d520ed38a921edb9473"; + sha256 = "04l8ch9297nhkgcmyhsbg0il424c8vy0isns1c7aypn0zp0dc4zd"; + }; + + nativeBuildInputs = [ + gobject-introspection + wrapGAppsHook + ]; + + pythonPath = [ + pygobject3 + pycairo + ]; + + buildInputs = [ + glib + gtk3 + ]; + + # https://github.com/NixOS/nixpkgs/issues/56943 + # this must be false, otherwise the gobject-introspection hook doesn't run + strictDeps = false; + + preDistPhases = [ "fixupIconPath" ]; + + fixupIconPath = '' + pickLoc="$out/${python.sitePackages}/pick" + shareLoc=$(echo "$out/${python.sitePackages}/nix/store/"*) + mv "$shareLoc/share" "$out/share" + + sed "s|os.environ.get('SNAP'), \"usr\"|'$out'|g" -i "$pickLoc/__main__.py" + ''; + + meta = with stdenv.lib; { + homepage = "https://kryogenix.org/code/pick/"; + license = licenses.mit; + platforms = platforms.linux; + description = "A colour picker that remembers where you picked colours from"; + maintainers = [ maintainers.mkg20001 ]; + + longDescription = '' + Pick lets you pick colours from anywhere on your screen. Choose the colour you want and Pick remembers it, names it, and shows you a screenshot so you can remember where you got it from. + + Zoom all the way in to pixels to pick just the right one. Show your colours in your choice of format: rgba() or hex, CSS or Gdk or Qt, whichever you prefer. Copy to the clipboard ready for pasting into code or graphics apps. + ''; + }; +} diff --git a/pkgs/applications/graphics/rapid-photo-downloader/default.nix b/pkgs/applications/graphics/rapid-photo-downloader/default.nix index 4279af4cb78..2e12e18a5a5 100644 --- a/pkgs/applications/graphics/rapid-photo-downloader/default.nix +++ b/pkgs/applications/graphics/rapid-photo-downloader/default.nix @@ -67,14 +67,16 @@ mkDerivationWith python3Packages.buildPythonApplication rec { tenacity ]; - makeWrapperArgs = [ - "--set GI_TYPELIB_PATH \"$GI_TYPELIB_PATH\"" - "--set PYTHONPATH \"$PYTHONPATH\"" - "--prefix PATH : ${stdenv.lib.makeBinPath [ exiftool vmtouch ]}" - "--prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ libmediainfo ]}" - "--prefix GST_PLUGIN_SYSTEM_PATH_1_0 : \"$GST_PLUGIN_SYSTEM_PATH_1_0\"" - "\${qtWrapperArgs[@]}" - ]; + preFixup = '' + makeWrapperArgs+=( + --set GI_TYPELIB_PATH "$GI_TYPELIB_PATH" + --set PYTHONPATH "$PYTHONPATH" + --prefix PATH : "${stdenv.lib.makeBinPath [ exiftool vmtouch ]}" + --prefix LD_LIBRARY_PATH : "${stdenv.lib.makeLibraryPath [ libmediainfo ]}" + --prefix GST_PLUGIN_SYSTEM_PATH_1_0 : "$GST_PLUGIN_SYSTEM_PATH_1_0" + "''${qtWrapperArgs[@]}" + ) + ''; meta = with stdenv.lib; { description = "Photo and video importer for cameras, phones, and memory cards"; diff --git a/pkgs/applications/kde/akonadi-calendar.nix b/pkgs/applications/kde/akonadi-calendar.nix index ce6b6f75f93..121e93d3f5c 100644 --- a/pkgs/applications/kde/akonadi-calendar.nix +++ b/pkgs/applications/kde/akonadi-calendar.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - akonadi, akonadi-contacts, kcalcore, kcalutils, kcontacts, + akonadi, akonadi-contacts, kcalendarcore, kcalutils, kcontacts, kidentitymanagement, kio, kmailtransport, }: @@ -13,7 +13,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ - akonadi akonadi-contacts kcalcore kcalutils kcontacts kidentitymanagement + akonadi akonadi-contacts kcalendarcore kcalutils kcontacts kidentitymanagement kio kmailtransport ]; outputs = [ "out" "dev" ]; diff --git a/pkgs/applications/kde/akonadi-search.nix b/pkgs/applications/kde/akonadi-search.nix index 617c086ad9c..23ee6b1b9cc 100644 --- a/pkgs/applications/kde/akonadi-search.nix +++ b/pkgs/applications/kde/akonadi-search.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - akonadi, akonadi-mime, kcalcore, kcmutils, kcontacts, kcoreaddons, kmime, + akonadi, akonadi-mime, kcalendarcore, kcmutils, kcontacts, kcoreaddons, kmime, krunner, qtbase, xapian }: @@ -14,7 +14,7 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ kcmutils krunner xapian ]; propagatedBuildInputs = [ - akonadi akonadi-mime kcalcore kcontacts kcoreaddons kmime qtbase + akonadi akonadi-mime kcalendarcore kcontacts kcoreaddons kmime qtbase ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/akonadiconsole.nix b/pkgs/applications/kde/akonadiconsole.nix index 1470406d5a4..a02400847bb 100644 --- a/pkgs/applications/kde/akonadiconsole.nix +++ b/pkgs/applications/kde/akonadiconsole.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - akonadi, akonadi-contacts, calendarsupport, kcalcore, kcompletion, + akonadi, akonadi-contacts, calendarsupport, kcalendarcore, kcompletion, kconfigwidgets, kcontacts, kdbusaddons, kitemmodels, kpimtextedit, libkdepim, ktextwidgets, kxmlgui, messagelib, qtbase, akonadi-search, xapian }: @@ -14,7 +14,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ - akonadi akonadi-contacts calendarsupport kcalcore kcompletion kconfigwidgets + akonadi akonadi-contacts calendarsupport kcalendarcore kcompletion kconfigwidgets kcontacts kdbusaddons kitemmodels kpimtextedit ktextwidgets kxmlgui messagelib qtbase libkdepim akonadi-search xapian ]; diff --git a/pkgs/applications/kde/ark/default.nix b/pkgs/applications/kde/ark/default.nix index 6015cb69d77..76cc423f546 100644 --- a/pkgs/applications/kde/ark/default.nix +++ b/pkgs/applications/kde/ark/default.nix @@ -22,6 +22,7 @@ in mkDerivation { name = "ark"; meta = { + description = "Graphical file compression/decompression utility"; license = with lib.licenses; [ gpl2 lgpl3 ] ++ lib.optional unfreeEnableUnrar unfree; maintainers = [ lib.maintainers.ttuegel ]; diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix index 70a716a760c..40e69f8c9bc 100644 --- a/pkgs/applications/kde/default.nix +++ b/pkgs/applications/kde/default.nix @@ -138,6 +138,7 @@ let konquest = callPackage ./konquest.nix {}; konqueror = callPackage ./konqueror.nix {}; korganizer = callPackage ./korganizer.nix {}; + kpat = callPackage ./kpat.nix {}; kpimtextedit = callPackage ./kpimtextedit.nix {}; ksmtp = callPackage ./ksmtp {}; kqtquickcharts = callPackage ./kqtquickcharts.nix {}; diff --git a/pkgs/applications/kde/fetch.sh b/pkgs/applications/kde/fetch.sh index 083debb1c99..a335b0ef8e8 100644 --- a/pkgs/applications/kde/fetch.sh +++ b/pkgs/applications/kde/fetch.sh @@ -1 +1 @@ -WGET_ARGS=( https://download.kde.org/stable/applications/19.08.2/ ) +WGET_ARGS=( https://download.kde.org/stable/applications/19.08.3/ ) diff --git a/pkgs/applications/kde/kalarm.nix b/pkgs/applications/kde/kalarm.nix index 9978e7ff667..a1dec1179cc 100644 --- a/pkgs/applications/kde/kalarm.nix +++ b/pkgs/applications/kde/kalarm.nix @@ -6,7 +6,7 @@ kguiaddons, ki18n, kiconthemes, kjobwidgets, kcmutils, kdelibs4support, kio, knotifications, kservice, kwidgetsaddons, kwindowsystem, kxmlgui, phonon, - kimap, akonadi, akonadi-contacts, akonadi-mime, kalarmcal, kcalcore, kcalutils, + kimap, akonadi, akonadi-contacts, akonadi-mime, kalarmcal, kcalendarcore, kcalutils, kholidays, kidentitymanagement, libkdepim, mailcommon, kmailtransport, kmime, pimcommon, kpimtextedit, kdepim-apps-libs, messagelib, @@ -27,7 +27,7 @@ mkDerivation { kguiaddons ki18n kiconthemes kjobwidgets kcmutils kdelibs4support kio knotifications kservice kwidgetsaddons kwindowsystem kxmlgui phonon - kimap akonadi akonadi-contacts akonadi-mime kalarmcal kcalcore kcalutils + kimap akonadi akonadi-contacts akonadi-mime kalarmcal kcalendarcore kcalutils kholidays kidentitymanagement libkdepim mailcommon kmailtransport kmime pimcommon kpimtextedit kdepim-apps-libs messagelib diff --git a/pkgs/applications/kde/kalarmcal.nix b/pkgs/applications/kde/kalarmcal.nix index 46832477cc6..356c1e4812d 100644 --- a/pkgs/applications/kde/kalarmcal.nix +++ b/pkgs/applications/kde/kalarmcal.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - akonadi, kcalcore, kdelibs4support, kholidays, kidentitymanagement, + akonadi, kcalendarcore, kdelibs4support, kholidays, kidentitymanagement, kpimtextedit, kcalutils }: @@ -13,7 +13,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ - akonadi kcalcore kdelibs4support kholidays kidentitymanagement kpimtextedit kcalutils + akonadi kcalendarcore kdelibs4support kholidays kidentitymanagement kpimtextedit kcalutils ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/kcalutils.nix b/pkgs/applications/kde/kcalutils.nix index 1628af7e220..2e389ec4ac7 100644 --- a/pkgs/applications/kde/kcalutils.nix +++ b/pkgs/applications/kde/kcalutils.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - grantlee, kcalcore, kconfig, kontactinterface, kcoreaddons, kdelibs4support, + grantlee, kcalendarcore, kconfig, kontactinterface, kcoreaddons, kdelibs4support, kidentitymanagement, kpimtextedit, }: @@ -13,7 +13,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ - grantlee kcalcore kconfig kontactinterface kcoreaddons kdelibs4support + grantlee kcalendarcore kconfig kontactinterface kcoreaddons kdelibs4support kidentitymanagement kpimtextedit ]; outputs = [ "out" "dev" ]; diff --git a/pkgs/applications/kde/kdepim-addons.nix b/pkgs/applications/kde/kdepim-addons.nix index 0fe33ea017d..e47aae89e60 100644 --- a/pkgs/applications/kde/kdepim-addons.nix +++ b/pkgs/applications/kde/kdepim-addons.nix @@ -2,7 +2,7 @@ mkDerivation, lib, kdepimTeam, extra-cmake-modules, shared-mime-info, akonadi-import-wizard, akonadi-notes, calendarsupport, eventviews, - incidenceeditor, kcalcore, kcalutils, kconfig, kdbusaddons, kdeclarative, + incidenceeditor, kcalendarcore, kcalutils, kconfig, kdbusaddons, kdeclarative, kdepim-apps-libs, kholidays, ki18n, kmime, ktexteditor, ktnef, libgravatar, libksieve, mailcommon, mailimporter, messagelib, poppler, prison, kpkpass, kitinerary, kontactinterface @@ -17,7 +17,7 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules shared-mime-info ]; buildInputs = [ akonadi-import-wizard akonadi-notes calendarsupport eventviews - incidenceeditor kcalcore kcalutils kconfig kdbusaddons kdeclarative + incidenceeditor kcalendarcore kcalutils kconfig kdbusaddons kdeclarative kdepim-apps-libs kholidays ki18n kmime ktexteditor ktnef libgravatar libksieve mailcommon mailimporter messagelib poppler prison kpkpass kitinerary kontactinterface diff --git a/pkgs/applications/kde/kitinerary.nix b/pkgs/applications/kde/kitinerary.nix index 8112460549b..ce66de251dc 100644 --- a/pkgs/applications/kde/kitinerary.nix +++ b/pkgs/applications/kde/kitinerary.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, extra-cmake-modules , qtbase, qtdeclarative, ki18n, kmime, kpkpass -, poppler, kcontacts, kcalcore +, poppler, kcontacts, kcalendarcore }: mkDerivation { @@ -13,7 +13,7 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules ]; buildInputs = [ qtbase qtdeclarative ki18n kmime kpkpass poppler - kcontacts kcalcore + kcontacts kcalendarcore ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/kmailtransport.nix b/pkgs/applications/kde/kmailtransport.nix index 703f62aa72c..d5832db570c 100644 --- a/pkgs/applications/kde/kmailtransport.nix +++ b/pkgs/applications/kde/kmailtransport.nix @@ -3,7 +3,7 @@ extra-cmake-modules, kdoctools, akonadi, akonadi-mime, cyrus_sasl, kcmutils, ki18n, kio, kmime, kwallet, ksmtp, libkgapi, - kcalcore, kcontacts + kcalendarcore, kcontacts }: mkDerivation { @@ -13,7 +13,7 @@ mkDerivation { maintainers = kdepimTeam; }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; - buildInputs = [ akonadi kcmutils ki18n kio ksmtp libkgapi kcalcore kcontacts ]; + buildInputs = [ akonadi kcmutils ki18n kio ksmtp libkgapi kcalendarcore kcontacts ]; propagatedBuildInputs = [ akonadi-mime cyrus_sasl kmime kwallet ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/knotes.nix b/pkgs/applications/kde/knotes.nix index ced046c2f4e..2dc2f48c149 100644 --- a/pkgs/applications/kde/knotes.nix +++ b/pkgs/applications/kde/knotes.nix @@ -9,7 +9,7 @@ grantlee, grantleetheme, qtx11extras, akonadi, akonadi-notes, akonadi-search, kcalutils, kontactinterface, libkdepim, kmime, pimcommon, kpimtextedit, - kcalcore + kcalendarcore }: mkDerivation { @@ -24,6 +24,6 @@ mkDerivation { akonadi akonadi-notes kcalutils kontactinterface libkdepim kmime pimcommon kpimtextedit akonadi-search - kcalcore + kcalendarcore ]; } diff --git a/pkgs/applications/kde/kpat.nix b/pkgs/applications/kde/kpat.nix new file mode 100644 index 00000000000..9ee57353237 --- /dev/null +++ b/pkgs/applications/kde/kpat.nix @@ -0,0 +1,25 @@ +{ lib +, mkDerivation +, extra-cmake-modules +, knewstuff +, shared-mime-info +, libkdegames +, freecell-solver +}: + +mkDerivation { + name = "kpat"; + nativeBuildInputs = [ + extra-cmake-modules + shared-mime-info + ]; + buildInputs = [ + knewstuff + libkdegames + freecell-solver + ]; + meta = { + license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; + maintainers = with lib.maintainers; [ rnhmjoj ]; + }; +} diff --git a/pkgs/applications/kde/ktnef.nix b/pkgs/applications/kde/ktnef.nix index b5a3834869d..61f8672e47d 100644 --- a/pkgs/applications/kde/ktnef.nix +++ b/pkgs/applications/kde/ktnef.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - kcalcore, kcalutils, kcontacts, kdelibs4support + kcalendarcore, kcalutils, kcontacts, kdelibs4support }: mkDerivation { @@ -12,7 +12,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ - kcalcore kcalutils kcontacts kdelibs4support + kcalendarcore kcalutils kcontacts kdelibs4support ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/libkgapi.nix b/pkgs/applications/kde/libkgapi.nix index 998e65f2834..9d2d41c41d7 100644 --- a/pkgs/applications/kde/libkgapi.nix +++ b/pkgs/applications/kde/libkgapi.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - qtwebengine, kio, kcalcore, kcontacts, + qtwebengine, kio, kcalendarcore, kcontacts, cyrus_sasl }: @@ -12,5 +12,5 @@ mkDerivation { maintainers = kdepimTeam; }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; - buildInputs = [ qtwebengine kio kcalcore kcontacts cyrus_sasl ]; + buildInputs = [ qtwebengine kio kcalendarcore kcontacts cyrus_sasl ]; } diff --git a/pkgs/applications/kde/pim-data-exporter.nix b/pkgs/applications/kde/pim-data-exporter.nix index 9f2117b41fb..82cdf19df94 100644 --- a/pkgs/applications/kde/pim-data-exporter.nix +++ b/pkgs/applications/kde/pim-data-exporter.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, - akonadi, akonadi-notes, kcalcore, kcmutils, kcrash, kdbusaddons, + akonadi, akonadi-notes, kcalendarcore, kcmutils, kcrash, kdbusaddons, kidentitymanagement, kldap, kmailtransport, knewstuff, knotifications, knotifyconfig, kparts, kross, ktexteditor, kwallet, libkdepim, libkleo, pimcommon, qttools, karchive, mailcommon, messagelib @@ -15,7 +15,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ - akonadi akonadi-notes kcalcore kcmutils kcrash kdbusaddons + akonadi akonadi-notes kcalendarcore kcmutils kcrash kdbusaddons kidentitymanagement kldap kmailtransport knewstuff knotifications knotifyconfig kparts kross ktexteditor kwallet libkdepim libkleo pimcommon qttools karchive mailcommon messagelib diff --git a/pkgs/applications/kde/srcs.nix b/pkgs/applications/kde/srcs.nix index 400dfcd7cec..8d199a291c4 100644 --- a/pkgs/applications/kde/srcs.nix +++ b/pkgs/applications/kde/srcs.nix @@ -3,1739 +3,1739 @@ { akonadi = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-19.08.2.tar.xz"; - sha256 = "f67f0fac07d480739b2d6715862ee47a93fd38f057ac7ef888ed8ddfdc99934f"; - name = "akonadi-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-19.08.3.tar.xz"; + sha256 = "cfdfa4767b1bd420c7979cf5125cc56d3926181f8484dc39ecd84a9e0808ee6c"; + name = "akonadi-19.08.3.tar.xz"; }; }; akonadi-calendar = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-calendar-19.08.2.tar.xz"; - sha256 = "5beba24af485c8dae96944e4b5bd570460eb2868ba069580c2e5d784be38a3c8"; - name = "akonadi-calendar-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-calendar-19.08.3.tar.xz"; + sha256 = "1ec66241551b0bd3e2cabd2df1547e3622b3c74e0ddaec535b5666141180a094"; + name = "akonadi-calendar-19.08.3.tar.xz"; }; }; akonadi-calendar-tools = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-calendar-tools-19.08.2.tar.xz"; - sha256 = "a352c2bf8659ad7939f31009b8e35e8b1e629162f681a70999e5e88f9aaf6cbb"; - name = "akonadi-calendar-tools-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-calendar-tools-19.08.3.tar.xz"; + sha256 = "539bef47c9586f1edb87cedf63cce140dab4f19b6a94fbe08b0cd4c083cf6ffc"; + name = "akonadi-calendar-tools-19.08.3.tar.xz"; }; }; akonadiconsole = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadiconsole-19.08.2.tar.xz"; - sha256 = "273b8f3d56ea65bd71a51103867b0e718d883478432bb971a262df1ea4c6df6c"; - name = "akonadiconsole-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadiconsole-19.08.3.tar.xz"; + sha256 = "37253a4b56afc34e52a05b58f63d1cdce221a11432c713f159b5c033a6018947"; + name = "akonadiconsole-19.08.3.tar.xz"; }; }; akonadi-contacts = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-contacts-19.08.2.tar.xz"; - sha256 = "eafeb550faea91a56109821864eedfbd619dc7850887746d31c1724ea7561920"; - name = "akonadi-contacts-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-contacts-19.08.3.tar.xz"; + sha256 = "a95ff2621e198e2685b7cd591e39437e68b5670cd710ce06088bd16618d281df"; + name = "akonadi-contacts-19.08.3.tar.xz"; }; }; akonadi-import-wizard = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-import-wizard-19.08.2.tar.xz"; - sha256 = "038713e7d30686eb1b8e49c595ec853ffa52d335e435a5b0bdf2f2a2448cae45"; - name = "akonadi-import-wizard-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-import-wizard-19.08.3.tar.xz"; + sha256 = "1a11207826ecc59af73ca2dae1b6299a6cd9c71c093e634043295747ba8f6553"; + name = "akonadi-import-wizard-19.08.3.tar.xz"; }; }; akonadi-mime = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-mime-19.08.2.tar.xz"; - sha256 = "16f8034d7990828c50a85474fe16641dfa46e22d00f49d8045d3483c61815264"; - name = "akonadi-mime-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-mime-19.08.3.tar.xz"; + sha256 = "e779a2b73b628702aec52b1d4345533f54f06624915b193766af3ef6a16d030f"; + name = "akonadi-mime-19.08.3.tar.xz"; }; }; akonadi-notes = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-notes-19.08.2.tar.xz"; - sha256 = "64684c50d06664d8ccda098f8bfa536e861e4938c8f27688ef97653f7788fdde"; - name = "akonadi-notes-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-notes-19.08.3.tar.xz"; + sha256 = "7c701d8a032161f9a58a55dd7e71a9a261fed8044ddc59d6d5f04bb742801b65"; + name = "akonadi-notes-19.08.3.tar.xz"; }; }; akonadi-search = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akonadi-search-19.08.2.tar.xz"; - sha256 = "75c9713b84a03c60a68ff36652decbf57f4f56a0fb39579f53e7ed80a5ee8525"; - name = "akonadi-search-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akonadi-search-19.08.3.tar.xz"; + sha256 = "3a04a82b7f13aad0a5c283931b347a951b8b4bf299bfc6f8cdbc5ba299d01f9b"; + name = "akonadi-search-19.08.3.tar.xz"; }; }; akregator = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/akregator-19.08.2.tar.xz"; - sha256 = "cefc0785f40508a80fbf4534eef4d1164e349cfd50455483cef044945d1888c4"; - name = "akregator-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/akregator-19.08.3.tar.xz"; + sha256 = "c3aab6ebba25eab8c76b113a900af33a90222257f957650d0bbc0c47d5cf4bc9"; + name = "akregator-19.08.3.tar.xz"; }; }; analitza = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/analitza-19.08.2.tar.xz"; - sha256 = "cbd51fd14d5ba74a7a3590ddca18ed688cbf724cd40f21c87b905f12fadf9399"; - name = "analitza-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/analitza-19.08.3.tar.xz"; + sha256 = "9247172f3ffbc0fd3308b4b40f5d76eaa2a5012dc49525c3087caf5cdfc1513e"; + name = "analitza-19.08.3.tar.xz"; }; }; ark = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/ark-19.08.2.tar.xz"; - sha256 = "63fcec0a32d806cfc82fb1c136b5e037bfe75459b148ac08c00be7e45ac70c50"; - name = "ark-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/ark-19.08.3.tar.xz"; + sha256 = "bc1fcd84632c628a10e8536d56b65a7acbd4235ed0e034fec864b78bdc36f8f1"; + name = "ark-19.08.3.tar.xz"; }; }; artikulate = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/artikulate-19.08.2.tar.xz"; - sha256 = "b2b0778f18f04096b84caf72c28dd4bdfdbbc8f0a22ef118b8d18dba19a3f85b"; - name = "artikulate-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/artikulate-19.08.3.tar.xz"; + sha256 = "99831d51bf8cb4032ba9af7c4ae0712f7b3668b7c51bce8f942808c1e5e42f85"; + name = "artikulate-19.08.3.tar.xz"; }; }; audiocd-kio = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/audiocd-kio-19.08.2.tar.xz"; - sha256 = "383c0e9055b0093661b589395288bb8d173372572490a4ba4960d214b2746b3a"; - name = "audiocd-kio-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/audiocd-kio-19.08.3.tar.xz"; + sha256 = "98d836def762b839b9636acc540158d5b4789a84d1bdb535ae139b10e9e144a4"; + name = "audiocd-kio-19.08.3.tar.xz"; }; }; baloo-widgets = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/baloo-widgets-19.08.2.tar.xz"; - sha256 = "529f3b587098eb9b7d1aaa8b311f98c58d16ed88384fa0900f9fb9f8e242c070"; - name = "baloo-widgets-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/baloo-widgets-19.08.3.tar.xz"; + sha256 = "edb9284b1a7d73b0c824390aa875593650880eb77c2680a2942c9fd65f436a2d"; + name = "baloo-widgets-19.08.3.tar.xz"; }; }; blinken = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/blinken-19.08.2.tar.xz"; - sha256 = "7f9d909bb845c365dbf49388b79687e7491c271dd7d2f9481a20397153a670f6"; - name = "blinken-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/blinken-19.08.3.tar.xz"; + sha256 = "620fe5ffb656f829a7ca72a2df40c19ff0562e3700f51bd66b7d8a6a486ed3c9"; + name = "blinken-19.08.3.tar.xz"; }; }; bomber = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/bomber-19.08.2.tar.xz"; - sha256 = "26285fe9e510cd334bb933281c615c2971084bfa787618ba0190175c36ada741"; - name = "bomber-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/bomber-19.08.3.tar.xz"; + sha256 = "3a0ef6ca5a05253b1554218a1dc699c5547a073da5cecdf75445e0f72b687fd3"; + name = "bomber-19.08.3.tar.xz"; }; }; bovo = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/bovo-19.08.2.tar.xz"; - sha256 = "63f7a3860de2344be69366f636e841cd3db19743a8a29c42e14402256ed3122b"; - name = "bovo-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/bovo-19.08.3.tar.xz"; + sha256 = "2f950820ebdb52f1c81476b36b5ea07808fe8da154e7757a85ca8ac2c1b37735"; + name = "bovo-19.08.3.tar.xz"; 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+ version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/mbox-importer-19.08.2.tar.xz"; - sha256 = "644175d6fcb66b878309de899f4a3e060e29d4f31ce337d44ee6e1af5901044f"; - name = "mbox-importer-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/mbox-importer-19.08.3.tar.xz"; + sha256 = "77fadf4d2dc14830704135237fb7c5f0285204acb9822277944cc03f70b8dc3c"; + name = "mbox-importer-19.08.3.tar.xz"; }; }; messagelib = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/messagelib-19.08.2.tar.xz"; - sha256 = "d761e94d2fa71c2de6a52e0c1756f52f0006ada35711189b343eccdafe0a0390"; - name = "messagelib-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/messagelib-19.08.3.tar.xz"; + sha256 = "db2e48e48d87922f9533ebd3eb021549e6bf8dea5828d83bfdfecb36b1426728"; + name = "messagelib-19.08.3.tar.xz"; }; }; minuet = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/minuet-19.08.2.tar.xz"; - sha256 = "1713ac758388443bbd1e2f5158cba594c35c3afdc5122a993fc66d70b07eb904"; - name = "minuet-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/minuet-19.08.3.tar.xz"; + sha256 = "8af3e0b5fd17d7043499391273232a1649ea3dec5e69faab5a4dc4452080605c"; + name = "minuet-19.08.3.tar.xz"; }; }; okular = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/okular-19.08.2.tar.xz"; - sha256 = "ff3d2eac444a110a611add71c30b0556085f5aaccdd821a80bd070a646c9f6b3"; - name = "okular-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/okular-19.08.3.tar.xz"; + sha256 = "cea30fe0c2c2b8394e76efe5c945eab1cc9619097291bd9236794b42b09523e5"; + name = "okular-19.08.3.tar.xz"; }; }; palapeli = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/palapeli-19.08.2.tar.xz"; - sha256 = "bae810595c7ba7bdac0fa5c27e6c2a3a9bb1bbdae3521cfc036ec0cdcd9ef1a7"; - name = "palapeli-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/palapeli-19.08.3.tar.xz"; + sha256 = "fc8e4ddd92def4998a0e8b11bc0a45671e5b07e065313aec135e74c056f321bd"; + name = "palapeli-19.08.3.tar.xz"; }; }; parley = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/parley-19.08.2.tar.xz"; - sha256 = "1201945d55657d6b89e309220edb1a60a61debf0bbf59b508d1c0a21a8dc407e"; - name = "parley-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/parley-19.08.3.tar.xz"; + sha256 = "a3d11ddf5a6c8244e5a22c10f6e256ad8bd857802d994550549c7f73f8ed8da8"; + name = "parley-19.08.3.tar.xz"; }; }; picmi = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/picmi-19.08.2.tar.xz"; - sha256 = "ecfa211043327991a0927be852c185223adebe5f15cdc39e79e31022802f904b"; - name = "picmi-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/picmi-19.08.3.tar.xz"; + sha256 = "6ed444d40a388e5c1f5f7bda24d35fa119fa5b5ee488def02321f14476bd357d"; + name = "picmi-19.08.3.tar.xz"; }; }; pimcommon = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/pimcommon-19.08.2.tar.xz"; - sha256 = "ccdf2624a055a9db31b0b8109c791776d111ae91438f41ed50dcb9faca287e4c"; - name = "pimcommon-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/pimcommon-19.08.3.tar.xz"; + sha256 = "76a67c28db71e1187fa192f0e1a07279c690dea313a2a376b2d21b82ab0784ca"; + name = "pimcommon-19.08.3.tar.xz"; }; }; pim-data-exporter = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/pim-data-exporter-19.08.2.tar.xz"; - sha256 = "e4703d7a10935814738394a38c5ad54f9923c58e43c397e2e78a4b1b1176f4c2"; - name = "pim-data-exporter-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/pim-data-exporter-19.08.3.tar.xz"; + sha256 = "f89b6588822dd5501e1b93ed3abd9b822725944246ab834777ed0f91f5ab6b91"; + name = "pim-data-exporter-19.08.3.tar.xz"; }; }; pim-sieve-editor = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/pim-sieve-editor-19.08.2.tar.xz"; - sha256 = "ae9f7de78ab9adffe2575bf1367b1ae4928afee1fd299bb91ca2d26b3bb86c03"; - name = "pim-sieve-editor-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/pim-sieve-editor-19.08.3.tar.xz"; + sha256 = "5e8aa5d71ea923baf4376986db77b6dee16d6e281caf22855e97cfeebfb4c1fe"; + name = "pim-sieve-editor-19.08.3.tar.xz"; }; }; poxml = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/poxml-19.08.2.tar.xz"; - sha256 = "c5e36bd10d3a8d0474f903eebd45e026ca306beb74829c43a1e7be4ed34ca9e8"; - name = "poxml-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/poxml-19.08.3.tar.xz"; + sha256 = "be5feaf46d424a4a4edc5936924f9a8a6d1d5467ecedd0e415aa88e2c3170502"; + name = "poxml-19.08.3.tar.xz"; }; }; print-manager = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/print-manager-19.08.2.tar.xz"; - sha256 = "c0702208b6f485e2e44337aaf203b9e391adda22d6526bf0dd34b31230e0fb05"; - name = "print-manager-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/print-manager-19.08.3.tar.xz"; + sha256 = "c6420dfa711fc68a6d681d27521eac3c9f1060e57f048594b43f2941a78320ee"; + name = "print-manager-19.08.3.tar.xz"; }; }; rocs = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/rocs-19.08.2.tar.xz"; - sha256 = "4e61226334f79a260f0ccc7789a099a91c7643d9fdfcdd052b002f2fe6f64885"; - name = "rocs-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/rocs-19.08.3.tar.xz"; + sha256 = "533ab2f17160c402550479d7d3be9132b49e1d745c021c7735f0687d12236c8e"; + name = "rocs-19.08.3.tar.xz"; }; }; signon-kwallet-extension = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/signon-kwallet-extension-19.08.2.tar.xz"; - sha256 = "2521cd2c4f25717f5caf9915474f75614be7dec7053f1e94c1429fac7045cc29"; - name = "signon-kwallet-extension-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/signon-kwallet-extension-19.08.3.tar.xz"; + sha256 = "273ff874bf08dd97a12b3b07215bc0ce9fd3c3c59b6bb1f61000411454211a65"; + name = "signon-kwallet-extension-19.08.3.tar.xz"; }; }; spectacle = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/spectacle-19.08.2.tar.xz"; - sha256 = "4cf2f0903cec2787a03a8bbdbd219acc29ac412f352a4ff94ef50ae9a6eb459e"; - name = "spectacle-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/spectacle-19.08.3.tar.xz"; + sha256 = "3717b7ebd314cac47c263c304c54c14b0115b15cfa4b87201f5ea27a2f4e9b8a"; + name = "spectacle-19.08.3.tar.xz"; }; }; step = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/step-19.08.2.tar.xz"; - sha256 = "dede94c073b2903fa4fa6806623cb980ebe93d15cc76376aadac4ca8cd61a96c"; - name = "step-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/step-19.08.3.tar.xz"; + sha256 = "1197b38d9ef14305cf341eba4cd2df08695a9b3f53e2bebff8abb7cbd7a9e2aa"; + name = "step-19.08.3.tar.xz"; }; }; svgpart = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/svgpart-19.08.2.tar.xz"; - sha256 = "6c6510b604bba3aebbeca136ec9534c416bc0ba55125227bdd0af2a86052855c"; - name = "svgpart-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/svgpart-19.08.3.tar.xz"; + sha256 = "1ad667fc6988b64fd379cfb79d00a7c04c97de530e4b61a9ae8a525971ea2a94"; + name = "svgpart-19.08.3.tar.xz"; }; }; sweeper = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/sweeper-19.08.2.tar.xz"; - sha256 = "da65cbfc952d8b63ddfbcba373d9a828ef5acefc68196ddd4c2c602c672cbb5f"; - name = "sweeper-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/sweeper-19.08.3.tar.xz"; + sha256 = "0451b9319c4390cfae497922cc135d7d8c4ef74ac81f2c05d2f94458bb3fc8be"; + name = "sweeper-19.08.3.tar.xz"; }; }; umbrello = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/umbrello-19.08.2.tar.xz"; - sha256 = "69a721d27ecedbe694d232e04469002dcf2319dd320982aacc2a02e32430c382"; - name = "umbrello-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/umbrello-19.08.3.tar.xz"; + sha256 = "c4c56354d2765c0d03ffda02cc098cc3e9d72b0c7c22bb0c1cc03dcf5ac31a6a"; + name = "umbrello-19.08.3.tar.xz"; }; }; yakuake = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/yakuake-19.08.2.tar.xz"; - sha256 = "3ebf477069c85a8705302b6b51902a74af7bb92349fab41000f71484a4de5aee"; - name = "yakuake-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/yakuake-19.08.3.tar.xz"; + sha256 = "1ad2cc026eea9449690aa037ac94b09cd18696d71025204e648501fa7f2cfbaf"; + name = "yakuake-19.08.3.tar.xz"; }; }; zeroconf-ioslave = { - version = "19.08.2"; + version = "19.08.3"; src = fetchurl { - url = "${mirror}/stable/applications/19.08.2/src/zeroconf-ioslave-19.08.2.tar.xz"; - sha256 = "19e31534d1a4503d1dd4bd8ef60cfb48a91ee167dd4b0db99e53b318a355dae0"; - name = "zeroconf-ioslave-19.08.2.tar.xz"; + url = "${mirror}/stable/applications/19.08.3/src/zeroconf-ioslave-19.08.3.tar.xz"; + sha256 = "b7b00edcc987c298e1dc885e3ceb6acbcbfe40141423d90406a3ccecef2471ed"; + name = "zeroconf-ioslave-19.08.3.tar.xz"; }; }; } diff --git a/pkgs/applications/misc/barrier/default.nix b/pkgs/applications/misc/barrier/default.nix index d8325e19e26..10e46176c6e 100644 --- a/pkgs/applications/misc/barrier/default.nix +++ b/pkgs/applications/misc/barrier/default.nix @@ -1,4 +1,5 @@ { stdenv, fetchFromGitHub, cmake, curl, xorg, avahi, qtbase, mkDerivation, + openssl, wrapGAppsHook, avahiWithLibdnssdCompat ? avahi.override { withLibdnssdCompat = true; } }: @@ -13,12 +14,17 @@ mkDerivation rec { sha256 = "1gbg3p7c0vcsdzsjj1ssx6k8xpj3rpyvais12266f0xvnbvihczd"; }; - buildInputs = [ cmake curl xorg.libX11 xorg.libXext xorg.libXtst avahiWithLibdnssdCompat qtbase ]; + buildInputs = [ curl xorg.libX11 xorg.libXext xorg.libXtst avahiWithLibdnssdCompat qtbase ]; + nativeBuildInputs = [ cmake wrapGAppsHook ]; postFixup = '' substituteInPlace "$out/share/applications/barrier.desktop" --replace "Exec=barrier" "Exec=$out/bin/barrier" ''; + qtWrapperArgs = [ + ''--prefix PATH : ${stdenv.lib.makeBinPath [ openssl ]}'' + ]; + meta = { description = "Open-source KVM software"; longDescription = '' diff --git a/pkgs/applications/misc/batti/default.nix b/pkgs/applications/misc/batti/default.nix deleted file mode 100644 index 8b994c55de3..00000000000 --- a/pkgs/applications/misc/batti/default.nix +++ /dev/null @@ -1,51 +0,0 @@ -{ stdenv, fetchurl -, pkgconfig, gettext, pythonPackages -, gtk2, gdk-pixbuf, upower -, makeWrapper }: - -let - inherit (pythonPackages) dbus-python pygtk python; -in stdenv.mkDerivation rec { - - pname = "batti"; - version = "0.3.8"; - - src = fetchurl { - url = "https://batti-gtk.googlecode.com/files/${pname}-${version}.tar.gz"; - sha256 = "072d92gpsiiin631589nj77i2w1425p6db0qxyml7myscfy9jgx6"; - }; - - buildInputs = with stdenv.lib; - [ pkgconfig gettext python gtk2 pygtk dbus-python gdk-pixbuf upower makeWrapper ]; - - dontConfigure = true; - - buildPhase = '' - python setup.py build - ''; - - installPhase = '' - python setup.py install --prefix $out - wrapProgram "$out/bin/batti" \ - --set PYTHONPATH "$PYTHONPATH:$(toPythonPath $out)" \ - --set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE" \ - --prefix XDG_DATA_DIRS : "$out/share:$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH" - ''; - - - meta = with stdenv.lib; { - description = "An {UPower,GTK}-based battery monitor for the system tray"; - longDescription = '' - Batti is a simple battery monitor for the system tray. Batti - uses UPower, and if that is missing DeviceKit.Power, for it's - power information. - ''; - homepage = http://batti-gtk.googlecode.com/; - license = licenses.lgpl2Plus; - maintainers = [ maintainers.AndersonTorres ]; - platforms = platforms.linux; - broken = true; # see https://github.com/NixOS/nixpkgs/pull/4031#issuecomment-56283520 - }; -} - -# TODO: fix the "icon not found" problems... diff --git a/pkgs/applications/misc/birdtray/default.nix b/pkgs/applications/misc/birdtray/default.nix index c6321dd83c0..39ecaa995d1 100644 --- a/pkgs/applications/misc/birdtray/default.nix +++ b/pkgs/applications/misc/birdtray/default.nix @@ -12,13 +12,13 @@ mkDerivation rec { pname = "birdtray"; - version = "1.6"; + version = "1.7.0"; src = fetchFromGitHub { owner = "gyunaev"; repo = pname; rev = "RELEASE_${version}"; - sha256 = "0n6qr224ir59ncid4xbdilk5642z0kcaylzbil1bdcv3h32ysjym"; + sha256 = "0wj2lq5bz1p0cf6yj43v3ifxschcrh5amwx30wqw2m4bb8syzjw1"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/applications/misc/bleachbit/default.nix b/pkgs/applications/misc/bleachbit/default.nix index 01eb69baadd..225a5c5fc37 100644 --- a/pkgs/applications/misc/bleachbit/default.nix +++ b/pkgs/applications/misc/bleachbit/default.nix @@ -1,4 +1,14 @@ -{ stdenv, pythonPackages, fetchurl, gettext }: +{ stdenv +, pythonPackages +, fetchurl +, gettext +, gobject-introspection +, wrapGAppsHook +, glib +, gtk3 +, libnotify +}: + pythonPackages.buildPythonApplication rec { pname = "bleachbit"; version = "3.0"; @@ -10,7 +20,24 @@ pythonPackages.buildPythonApplication rec { sha256 = "18ns9hms671b4l0189m1m2agprkydnpvyky9q2f5hxf35i9cn67d"; }; - nativeBuildInputs = [ gettext ]; + nativeBuildInputs = [ + gettext + gobject-introspection + wrapGAppsHook + ]; + + buildInputs = [ + glib + gtk3 + libnotify + ]; + + propagatedBuildInputs = with pythonPackages; [ + chardet + pygobject3 + requests + scandir + ]; # Patch the many hardcoded uses of /usr/share/ and /usr/bin postPatch = '' @@ -20,15 +47,17 @@ pythonPackages.buildPythonApplication rec { dontBuild = true; - installFlags = [ "prefix=${placeholder "out"}" ]; + installFlags = [ + "prefix=${placeholder "out"}" + ]; - propagatedBuildInputs = with pythonPackages; [ pygtk ]; + strictDeps = false; - meta = { + meta = with stdenv.lib; { homepage = http://bleachbit.sourceforge.net; description = "A program to clean your computer"; longDescription = "BleachBit helps you easily clean your computer to free space and maintain privacy."; - license = stdenv.lib.licenses.gpl3; - maintainers = with stdenv.lib.maintainers; [ leonardoce ]; + license = licenses.gpl3; + maintainers = with maintainers; [ leonardoce ]; }; } diff --git a/pkgs/applications/misc/cura/default.nix b/pkgs/applications/misc/cura/default.nix index 702a9c585a3..7187b8c0099 100644 --- a/pkgs/applications/misc/cura/default.nix +++ b/pkgs/applications/misc/cura/default.nix @@ -2,13 +2,13 @@ mkDerivation rec { pname = "cura"; - version = "4.3.0"; + version = "4.4.0"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "Cura"; - rev = version; - sha256 = "1wf60qr0wqsci5skp55qr8h56s3x5s2icxbn58ia9s4a5hhvnsmf"; + rev = "v${version}"; + sha256 = "131n36qhdfky584wr3zv73ckjjprwaqb5fih8yln2syf8b7ziwlz"; }; materials = fetchFromGitHub { diff --git a/pkgs/applications/misc/cura/plugins.nix b/pkgs/applications/misc/cura/plugins.nix index 20c58ddfb1d..35d6c97fa0b 100644 --- a/pkgs/applications/misc/cura/plugins.nix +++ b/pkgs/applications/misc/cura/plugins.nix @@ -6,13 +6,13 @@ let octoprint = stdenv.mkDerivation rec { pname = "Cura-OctoPrintPlugin"; - version = "3.5.8"; + version = "3.5.11"; src = fetchFromGitHub { owner = "fieldOfView"; repo = pname; - rev = "a82a42a87bbeb390b80b991afb1a6741c46a3432"; - sha256 = "0q5yd7pw626qls2ks2y39hb9czd6lgh71jalzl2drwdi6a8mwsfz"; + rev = "3cef0a955ae7ccfa5c07d20d9d147c530cc9d6ec"; + sha256 = "0q9bkwgpsbfwkp1bfaxq3wm9pbwx5d7ji0jr7cwc4y5nizji81is"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/applications/misc/curaengine/default.nix b/pkgs/applications/misc/curaengine/default.nix index 06c5d158565..6594deb84a5 100644 --- a/pkgs/applications/misc/curaengine/default.nix +++ b/pkgs/applications/misc/curaengine/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "curaengine"; - version = "4.3.0"; + version = "4.4.0"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "CuraEngine"; rev = version; - sha256 = "074qcaj1v2ri9wppx9lr066nlidkrsp9m1rrrk2hs2b61x0340ff"; + sha256 = "1m89bp4g0dldh7vv1clj110m29ajiaghdq7b49mb3y8ifgrf8rdi"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/applications/misc/djvulibre/CVE-2019-15142.patch b/pkgs/applications/misc/djvulibre/CVE-2019-15142.patch new file mode 100644 index 00000000000..89ff3759451 --- /dev/null +++ b/pkgs/applications/misc/djvulibre/CVE-2019-15142.patch @@ -0,0 +1,72 @@ +commit 970fb11a296b5bbdc5e8425851253d2c5913c45e +Author: Leon Bottou <leon@bottou.org> +Date: Tue Mar 26 20:36:31 2019 -0400 + + Fix bug#296 + +diff --git a/libdjvu/DjVmDir.cpp b/libdjvu/DjVmDir.cpp +index a6a39e0..0a0fac6 100644 +--- a/libdjvu/DjVmDir.cpp ++++ b/libdjvu/DjVmDir.cpp +@@ -299,42 +299,44 @@ DjVmDir::decode(const GP<ByteStream> &gstr) + memcpy((char*) strings+strings_size, buffer, length); + } + DEBUG_MSG("size of decompressed names block=" << strings.size() << "\n"); +- if (strings[strings.size()-1] != 0) +- { +- int strings_size=strings.size(); +- strings.resize(strings_size+1); +- strings[strings_size] = 0; +- } ++ int strings_size=strings.size(); ++ strings.resize(strings_size+3); ++ memset((char*) strings+strings_size, 0, 4); + +- // Copy names into the files ++ // Copy names into the files + const char * ptr=strings; + for(pos=files_list;pos;++pos) + { + GP<File> file=files_list[pos]; +- ++ if (ptr >= (const char*)strings + strings_size) ++ G_THROW( "DjVu document is corrupted (DjVmDir)" ); + file->id=ptr; + ptr+=file->id.length()+1; + if (file->flags & File::HAS_NAME) + { +- file->name=ptr; +- ptr+=file->name.length()+1; +- } else ++ file->name=ptr; ++ ptr+=file->name.length()+1; ++ } ++ else + { + file->name=file->id; + } + if (file->flags & File::HAS_TITLE) + { +- file->title=ptr; +- ptr+=file->title.length()+1; +- } else +- file->title=file->id; +- /* msr debug: multipage file, file->title is null. ++ file->title=ptr; ++ ptr+=file->title.length()+1; ++ } ++ else ++ { ++ file->title=file->id; ++ } ++ /* msr debug: multipage file, file->title is null. + DEBUG_MSG(file->name << ", " << file->id << ", " << file->title << ", " << + file->offset << ", " << file->size << ", " << + file->is_page() << "\n"); */ + } + +- // Check that there is only one file with SHARED_ANNO flag on ++ // Check that there is only one file with SHARED_ANNO flag on + int shared_anno_cnt=0; + for(pos=files_list;pos;++pos) + { diff --git a/pkgs/applications/misc/djvulibre/CVE-2019-15143.patch b/pkgs/applications/misc/djvulibre/CVE-2019-15143.patch new file mode 100644 index 00000000000..ef1905338fb --- /dev/null +++ b/pkgs/applications/misc/djvulibre/CVE-2019-15143.patch @@ -0,0 +1,39 @@ +commit b1f4e1b2187d9e5010cd01ceccf20b4a11ce723f +Author: Leon Bottou <leon@bottou.org> +Date: Tue Mar 26 20:45:46 2019 -0400 + + fix for bug #297 + +diff --git a/libdjvu/DjVmDir.cpp b/libdjvu/DjVmDir.cpp +index 0a0fac6..5a49015 100644 +--- a/libdjvu/DjVmDir.cpp ++++ b/libdjvu/DjVmDir.cpp +@@ -309,7 +309,7 @@ DjVmDir::decode(const GP<ByteStream> &gstr) + { + GP<File> file=files_list[pos]; + if (ptr >= (const char*)strings + strings_size) +- G_THROW( "DjVu document is corrupted (DjVmDir)" ); ++ G_THROW( ByteStream::EndOfFile ); + file->id=ptr; + ptr+=file->id.length()+1; + if (file->flags & File::HAS_NAME) +diff --git a/libdjvu/GBitmap.cpp b/libdjvu/GBitmap.cpp +index 0e487f0..c2fdbe4 100644 +--- a/libdjvu/GBitmap.cpp ++++ b/libdjvu/GBitmap.cpp +@@ -890,11 +890,13 @@ GBitmap::read_rle_raw(ByteStream &bs) + int c = 0; + while (n >= 0) + { +- bs.read(&h, 1); ++ if (bs.read(&h, 1) <= 0) ++ G_THROW( ByteStream::EndOfFile ); + int x = h; + if (x >= (int)RUNOVERFLOWVALUE) + { +- bs.read(&h, 1); ++ if (bs.read(&h, 1) <= 0) ++ G_THROW( ByteStream::EndOfFile ); + x = h + ((x - (int)RUNOVERFLOWVALUE) << 8); + } + if (c+x > ncolumns) diff --git a/pkgs/applications/misc/djvulibre/CVE-2019-15144.patch b/pkgs/applications/misc/djvulibre/CVE-2019-15144.patch new file mode 100644 index 00000000000..6094be88338 --- /dev/null +++ b/pkgs/applications/misc/djvulibre/CVE-2019-15144.patch @@ -0,0 +1,111 @@ +commit e15d51510048927f172f1bf1f27ede65907d940d +Author: Leon Bottou <leon@bottou.org> +Date: Mon Apr 8 22:25:55 2019 -0400 + + bug 299 fixed + +diff --git a/libdjvu/GContainer.h b/libdjvu/GContainer.h +index 96b067c..0140211 100644 +--- a/libdjvu/GContainer.h ++++ b/libdjvu/GContainer.h +@@ -550,52 +550,61 @@ public: + template <class TYPE> void + GArrayTemplate<TYPE>::sort(int lo, int hi) + { +- if (hi <= lo) +- return; +- if (hi > hibound || lo<lobound) +- G_THROW( ERR_MSG("GContainer.illegal_subscript") ); + TYPE *data = (TYPE*)(*this); +- // Test for insertion sort +- if (hi <= lo + 50) ++ while(true) + { +- for (int i=lo+1; i<=hi; i++) ++ if (hi <= lo) ++ return; ++ if (hi > hibound || lo<lobound) ++ G_THROW( ERR_MSG("GContainer.illegal_subscript") ); ++ // Test for insertion sort ++ if (hi <= lo + 50) + { +- int j = i; +- TYPE tmp = data[i]; +- while ((--j>=lo) && !(data[j]<=tmp)) +- data[j+1] = data[j]; +- data[j+1] = tmp; ++ for (int i=lo+1; i<=hi; i++) ++ { ++ int j = i; ++ TYPE tmp = data[i]; ++ while ((--j>=lo) && !(data[j]<=tmp)) ++ data[j+1] = data[j]; ++ data[j+1] = tmp; ++ } ++ return; + } +- return; +- } +- // -- determine suitable quick-sort pivot +- TYPE tmp = data[lo]; +- TYPE pivot = data[(lo+hi)/2]; +- if (pivot <= tmp) +- { tmp = pivot; pivot=data[lo]; } +- if (data[hi] <= tmp) +- { pivot = tmp; } +- else if (data[hi] <= pivot) +- { pivot = data[hi]; } +- // -- partition set +- int h = hi; +- int l = lo; +- while (l < h) +- { +- while (! (pivot <= data[l])) l++; +- while (! (data[h] <= pivot)) h--; +- if (l < h) ++ // -- determine median-of-three pivot ++ TYPE tmp = data[lo]; ++ TYPE pivot = data[(lo+hi)/2]; ++ if (pivot <= tmp) ++ { tmp = pivot; pivot=data[lo]; } ++ if (data[hi] <= tmp) ++ { pivot = tmp; } ++ else if (data[hi] <= pivot) ++ { pivot = data[hi]; } ++ // -- partition set ++ int h = hi; ++ int l = lo; ++ while (l < h) + { +- tmp = data[l]; +- data[l] = data[h]; +- data[h] = tmp; +- l = l+1; +- h = h-1; ++ while (! (pivot <= data[l])) l++; ++ while (! (data[h] <= pivot)) h--; ++ if (l < h) ++ { ++ tmp = data[l]; ++ data[l] = data[h]; ++ data[h] = tmp; ++ l = l+1; ++ h = h-1; ++ } ++ } ++ // -- recurse, small partition first ++ // tail-recursion elimination ++ if (h - lo <= hi - l) { ++ sort(lo,h); ++ lo = l; // sort(l,hi) ++ } else { ++ sort(l,hi); ++ hi = h; // sort(lo,h) + } + } +- // -- recursively restart +- sort(lo, h); +- sort(l, hi); + } + + template<class TYPE> inline TYPE& diff --git a/pkgs/applications/misc/djvulibre/CVE-2019-15145.patch b/pkgs/applications/misc/djvulibre/CVE-2019-15145.patch new file mode 100644 index 00000000000..01108f9ee73 --- /dev/null +++ b/pkgs/applications/misc/djvulibre/CVE-2019-15145.patch @@ -0,0 +1,28 @@ +commit 9658b01431cd7ff6344d7787f855179e73fe81a7 +Author: Leon Bottou <leon@bottou.org> +Date: Mon Apr 8 22:55:38 2019 -0400 + + fix bug #298 + +diff --git a/libdjvu/GBitmap.h b/libdjvu/GBitmap.h +index e8e0c9b..ca89a19 100644 +--- a/libdjvu/GBitmap.h ++++ b/libdjvu/GBitmap.h +@@ -566,7 +566,7 @@ GBitmap::operator[](int row) + { + if (!bytes) + uncompress(); +- if (row<0 || row>=nrows) { ++ if (row<0 || row>=nrows || !bytes) { + #ifndef NDEBUG + if (zerosize < bytes_per_row + border) + G_THROW( ERR_MSG("GBitmap.zero_small") ); +@@ -581,7 +581,7 @@ GBitmap::operator[](int row) const + { + if (!bytes) + ((GBitmap*)this)->uncompress(); +- if (row<0 || row>=nrows) { ++ if (row<0 || row>=nrows || !bytes) { + #ifndef NDEBUG + if (zerosize < bytes_per_row + border) + G_THROW( ERR_MSG("GBitmap.zero_small") ); diff --git a/pkgs/applications/misc/djvulibre/CVE-2019-18804.patch b/pkgs/applications/misc/djvulibre/CVE-2019-18804.patch new file mode 100644 index 00000000000..132fed79488 --- /dev/null +++ b/pkgs/applications/misc/djvulibre/CVE-2019-18804.patch @@ -0,0 +1,32 @@ +commit c8bec6549c10ffaa2f2fbad8bbc629efdf0dd125 +Author: Leon Bottou <leon@bottou.org> +Date: Thu Oct 17 22:20:31 2019 -0400 + + Fixed bug 309 + +diff --git a/libdjvu/IW44EncodeCodec.cpp b/libdjvu/IW44EncodeCodec.cpp +index 00752a0..f81eaeb 100644 +--- a/libdjvu/IW44EncodeCodec.cpp ++++ b/libdjvu/IW44EncodeCodec.cpp +@@ -405,7 +405,7 @@ filter_fv(short *p, int w, int h, int rowsize, int scale) + int y = 0; + int s = scale*rowsize; + int s3 = s+s+s; +- h = ((h-1)/scale)+1; ++ h = (h>0) ? ((h-1)/scale)+1 : 0; + y += 1; + p += s; + while (y-3 < h) +diff --git a/tools/ddjvu.cpp b/tools/ddjvu.cpp +index 6d0df3b..7109952 100644 +--- a/tools/ddjvu.cpp ++++ b/tools/ddjvu.cpp +@@ -279,7 +279,7 @@ render(ddjvu_page_t *page, int pageno) + prect.h = (ih * 100) / dpi; + } + /* Process aspect ratio */ +- if (flag_aspect <= 0) ++ if (flag_aspect <= 0 && iw>0 && ih>0) + { + double dw = (double)iw / prect.w; + double dh = (double)ih / prect.h; diff --git a/pkgs/applications/misc/djvulibre/default.nix b/pkgs/applications/misc/djvulibre/default.nix index 182ab51dbc2..afb7b6cf139 100644 --- a/pkgs/applications/misc/djvulibre/default.nix +++ b/pkgs/applications/misc/djvulibre/default.nix @@ -24,6 +24,17 @@ stdenv.mkDerivation rec { libiconv ]; + patches = [ + ./CVE-2019-18804.patch + # This one is needed to make the following + # two CVE patches apply cleanly + ./fix_hongfuzz_crash.patch + ./CVE-2019-15142.patch + ./CVE-2019-15143.patch + ./CVE-2019-15144.patch + ./CVE-2019-15145.patch + ]; + meta = with stdenv.lib; { description = "The big set of CLI tools to make/modify/optimize/show/export DJVU files"; homepage = "http://djvu.sourceforge.net"; diff --git a/pkgs/applications/misc/djvulibre/fix_hongfuzz_crash.patch b/pkgs/applications/misc/djvulibre/fix_hongfuzz_crash.patch new file mode 100644 index 00000000000..609b41cd9db --- /dev/null +++ b/pkgs/applications/misc/djvulibre/fix_hongfuzz_crash.patch @@ -0,0 +1,51 @@ +commit 89d71b01d606e57ecec2c2930c145bb20ba5bbe3 +Author: Leon Bottou <leon@bottou.org> +Date: Fri Jul 13 08:46:22 2018 -0400 + + fix hongfuzz crash. + +diff --git a/libdjvu/DjVmDir.cpp b/libdjvu/DjVmDir.cpp +index d322323..a6a39e0 100644 +--- a/libdjvu/DjVmDir.cpp ++++ b/libdjvu/DjVmDir.cpp +@@ -299,7 +299,13 @@ DjVmDir::decode(const GP<ByteStream> &gstr) + memcpy((char*) strings+strings_size, buffer, length); + } + DEBUG_MSG("size of decompressed names block=" << strings.size() << "\n"); +- ++ if (strings[strings.size()-1] != 0) ++ { ++ int strings_size=strings.size(); ++ strings.resize(strings_size+1); ++ strings[strings_size] = 0; ++ } ++ + // Copy names into the files + const char * ptr=strings; + for(pos=files_list;pos;++pos) +diff --git a/libdjvu/miniexp.cpp b/libdjvu/miniexp.cpp +index 6a5cd90..828addc 100644 +--- a/libdjvu/miniexp.cpp ++++ b/libdjvu/miniexp.cpp +@@ -1065,7 +1065,7 @@ print_c_string(const char *s, char *d, int flags, size_t len) + c = (unsigned char)(*s++); + if (char_quoted(c, flags)) + { +- char buffer[10]; ++ char buffer[16]; /* 10+1 */ + static const char *tr1 = "\"\\tnrbf"; + static const char *tr2 = "\"\\\t\n\r\b\f"; + buffer[0] = buffer[1] = 0; +diff --git a/tools/csepdjvu.cpp b/tools/csepdjvu.cpp +index 7ed13ad..fab9472 100644 +--- a/tools/csepdjvu.cpp ++++ b/tools/csepdjvu.cpp +@@ -1834,7 +1834,7 @@ main(int argc, const char **argv) + ByteStream::create(GURL::Filename::UTF8(arg),"rb"); + BufferByteStream ibs(*fbs); + do { +- char pagename[16]; ++ char pagename[20]; + sprintf(pagename, "p%04d.djvu", ++pageno); + if (opts.verbose > 1) + DjVuPrintErrorUTF8("%s","--------------------\n"); diff --git a/pkgs/applications/misc/dupeguru/default.nix b/pkgs/applications/misc/dupeguru/default.nix new file mode 100644 index 00000000000..0e7155f374d --- /dev/null +++ b/pkgs/applications/misc/dupeguru/default.nix @@ -0,0 +1,62 @@ +{stdenv, python3Packages, gettext, qt5, fetchFromGitHub}: + +python3Packages.buildPythonApplication rec { + pname = "dupeguru"; + version = "4.0.4"; + + format = "other"; + + src = fetchFromGitHub { + owner = "arsenetar"; + repo = "dupeguru"; + rev = "${version}"; + sha256 = "0ma4f1c6vmpz8gi4sdy43x1ik7wh42wayvk1iq520d3i714kfcpy"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ + gettext + python3Packages.pyqt5 + qt5.wrapQtAppsHook + ]; + + pythonPath = with python3Packages; [ + pyqt5 + send2trash + sphinx + polib + hsaudiotag3k + ]; + + makeFlags = [ + "PREFIX=${placeholder ''out''}" + "NO_VENV=1" + ]; + + # TODO: package pytest-monkeyplus for running tests + # https://github.com/NixOS/nixpkgs/pull/75054/files#r357690123 + doCheck = false; + + # Avoid double wrapping Python programs. + dontWrapQtApps = true; + + preFixup = '' + # TODO: A bug in python wrapper + # see https://github.com/NixOS/nixpkgs/pull/75054#discussion_r357656916 + makeWrapperArgs="''${qtWrapperArgs[@]}" + ''; + + postFixup = '' + # Executable in $out/bin is a symlink to $out/share/dupeguru/run.py + # so wrapPythonPrograms hook does not handle it automatically. + wrapPythonProgramsIn "$out/share/dupeguru" "$out $pythonPath" + ''; + + meta = with stdenv.lib; { + description = "GUI tool to find duplicate files in a system"; + homepage = "https://github.com/arsenetar/dupeguru"; + license = licenses.bsd3; + platforms = platforms.linux; + maintainers = [ maintainers.novoxudonoser ]; + }; +} diff --git a/pkgs/applications/misc/electrum/default.nix b/pkgs/applications/misc/electrum/default.nix index 0ebeb1beffa..df95b26b9c5 100644 --- a/pkgs/applications/misc/electrum/default.nix +++ b/pkgs/applications/misc/electrum/default.nix @@ -74,6 +74,7 @@ python3Packages.buildPythonApplication { tlslite-ng # plugins + ckcc-protocol keepkey trezor btchip diff --git a/pkgs/applications/misc/elogind/default.nix b/pkgs/applications/misc/elogind/default.nix index c5978dac2d5..3d71d9855d0 100644 --- a/pkgs/applications/misc/elogind/default.nix +++ b/pkgs/applications/misc/elogind/default.nix @@ -29,13 +29,13 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "elogind"; - version = "241.3"; + version = "241.4"; src = fetchFromGitHub { owner = "elogind"; repo = pname; rev = "v${version}"; - sha256 = "0jpb55prqq5cm3w2gy9766cbaqknjvbrbniyshb8bz1q31vf4jlq"; + sha256 = "13nd0chackqclgvw43910k4pkw2q773dh6wq9s5f3d97ibnik48k"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/misc/fsv/default.nix b/pkgs/applications/misc/fsv/default.nix index 00e11858fb4..bbc78efe5cd 100644 --- a/pkgs/applications/misc/fsv/default.nix +++ b/pkgs/applications/misc/fsv/default.nix @@ -26,6 +26,11 @@ in stdenv.mkDerivation rec { sha256 = "0n09jd7yqj18mx6zqbg7kab4idg5llr15g6avafj74fpg1h7iimj"; }; + postPatch = '' + # fix build with gettext 0.20 + sed -i 's/AM_GNU_GETTEXT/AM_GNU_GETTEXT([external])/' configure.in + ''; + nativeBuildInputs = [ autoreconfHook libtool pkgconfig ]; buildInputs = [ file gtk2 libGLU gtkglarea ]; diff --git a/pkgs/applications/misc/gnome15/default.nix b/pkgs/applications/misc/gnome15/default.nix deleted file mode 100644 index 41d535b3510..00000000000 --- a/pkgs/applications/misc/gnome15/default.nix +++ /dev/null @@ -1,39 +0,0 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, python2, gnome_python, gnome_python_desktop }: - -stdenv.mkDerivation { - name = "gnome15-2016-06-10"; - - src = fetchFromGitHub { - owner = "achilleas-k"; - repo = "gnome15"; - rev = "1077c890d9ba8ef7a5e448e70a792de5c7443c84"; - sha256 = "0z5k2rgvv5zyi3lbbk6svncypidj44qzfchivb4vlr7clmh16m95"; - }; - - nativeBuildInputs = [ autoreconfHook pkgconfig python2.pkgs.wrapPython ]; - buildInputs = [ python2 ]; - propagatedBuildInputs = with python2.pkgs; [ - pygtk keyring virtkey pillow dbus-python pyinotify lxml pyxdg pyusb gnome_python gnome_python_desktop - python-uinput xlib pyudev pyinputevent - ]; - - postPatch = '' - touch README - export UDEV_RULES_PATH="$out/lib/udev/rules.d" - ''; - - postFixup = '' - wrapPythonPrograms - ''; - - meta = with stdenv.lib; { - description = "A set of tools for configuring the Logitech G15 keyboard"; - # Doesn't work with new `keyring` library which is Python 3-only now. - # https://github.com/Gnome15/gnome15/issues/29 - broken = true; - license = licenses.gpl3; - homepage = https://gnome15.org/; - platforms = platforms.linux; - maintainers = with maintainers; [ abbradar ]; - }; -} diff --git a/pkgs/applications/misc/googler/default.nix b/pkgs/applications/misc/googler/default.nix index 12eb8839b8a..60feecd665d 100644 --- a/pkgs/applications/misc/googler/default.nix +++ b/pkgs/applications/misc/googler/default.nix @@ -1,14 +1,14 @@ -{stdenv, fetchFromGitHub, python}: +{ stdenv, fetchFromGitHub, python }: stdenv.mkDerivation rec { - version = "3.9"; pname = "googler"; + version = "4.0"; src = fetchFromGitHub { owner = "jarun"; - repo = "googler"; + repo = pname; rev = "v${version}"; - sha256 = "0zqq157i0rfrja8yqnqr9rfrp5apzc7cxb7d7ppv6abkc5bckyqc"; + sha256 = "13jj15ph0vmbyxjslzl6z4h5b7wyllvhwgsrb6zf7qlkcmkd4vwy"; }; propagatedBuildInputs = [ python ]; @@ -16,10 +16,10 @@ stdenv.mkDerivation rec { makeFlags = "PREFIX=$(out)"; meta = with stdenv.lib; { - homepage = https://github.com/jarun/googler; + homepage = "https://github.com/jarun/googler"; description = "Google Search, Google Site Search, Google News from the terminal"; license = licenses.gpl3; - maintainers = with maintainers; [ koral ]; + maintainers = with maintainers; [ koral filalex77 ]; platforms = platforms.unix; }; } diff --git a/pkgs/applications/misc/gpxlab/default.nix b/pkgs/applications/misc/gpxlab/default.nix new file mode 100644 index 00000000000..b4778f9f4f8 --- /dev/null +++ b/pkgs/applications/misc/gpxlab/default.nix @@ -0,0 +1,34 @@ +{ mkDerivation, lib, fetchFromGitHub, qmake, qttools, qttranslations }: + +mkDerivation rec { + pname = "gpxlab"; + version = "0.7.0"; + + src = fetchFromGitHub { + owner = "BourgeoisLab"; + repo = "GPXLab"; + rev = "v${version}"; + sha256 = "080vnwcciqblfrbfyz9gjhl2lqw1hkdpbgr5qfrlyglkd4ynjd84"; + }; + + nativeBuildInputs = [ qmake ]; + buildInputs = [ qttools qttranslations ]; + + preConfigure = '' + lrelease GPXLab/locale/*.ts + ''; + + enableParallelBuilding = true; + + meta = with lib; { + homepage = "https://github.com/BourgeoisLab/GPXLab"; + description = "Program to show and manipulate GPS tracks"; + longDescription = '' + GPXLab is an application to display and manage GPS tracks + previously recorded with a GPS tracker. + ''; + license = licenses.gpl3; + maintainers = with maintainers; [ sikmir ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/grip/default.nix b/pkgs/applications/misc/grip/default.nix index 68d373d7a9a..36ca31707c8 100644 --- a/pkgs/applications/misc/grip/default.nix +++ b/pkgs/applications/misc/grip/default.nix @@ -2,11 +2,11 @@ , curl, cdparanoia, libid3tag, ncurses, libtool }: stdenv.mkDerivation rec { - name = "grip-4.0.0"; + name = "grip-4.0.1"; src = fetchurl { url = "mirror://sourceforge/grip/${name}.tar.gz"; - sha256 = "1k4mnzz2ky3wps147sdpxx7pz87zpfws2hdyl3x68iji54697qi0"; + sha256 = "0blh5j3d4g16bhsqmhv71qhbsyyzcqywzpqsjjiiw465mjlwxka6"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/misc/hamster-time-tracker/default.nix b/pkgs/applications/misc/hamster-time-tracker/default.nix deleted file mode 100644 index 9360e220ab6..00000000000 --- a/pkgs/applications/misc/hamster-time-tracker/default.nix +++ /dev/null @@ -1,42 +0,0 @@ -{ stdenv, fetchzip, pythonPackages, docbook2x, libxslt, gnome-doc-utils -, intltool, dbus-glib, gnome_python -, hicolor-icon-theme -, wafHook -}: - -# TODO: Add optional dependency 'wnck', for "workspace tracking" support. Fixes -# this message: -# -# WARNING:root:Could not import wnck - workspace tracking will be disabled - -pythonPackages.buildPythonApplication rec { - name = "hamster-time-tracker-1.04"; - - src = fetchzip { - name = "${name}-src"; - url = "https://github.com/projecthamster/hamster/archive/${name}.tar.gz"; - sha256 = "1a85rcg561792kdyv744cgzw7mmpmgv6d6li1sijfdpqa1ninf8g"; - }; - - nativeBuildInputs = [ wafHook intltool ]; - buildInputs = [ - docbook2x libxslt gnome-doc-utils dbus-glib hicolor-icon-theme - ]; - - propagatedBuildInputs = with pythonPackages; [ pygobject2 pygtk pyxdg gnome_python dbus-python ]; - - postFixup = '' - wrapPythonProgramsIn $out/lib/hamster-time-tracker "$out $pythonPath" - ''; - - # error: invalid command 'test' - doCheck = false; - - meta = with stdenv.lib; { - description = "Time tracking application"; - homepage = https://projecthamster.wordpress.com/; - license = licenses.gpl3; - platforms = platforms.all; - maintainers = [ maintainers.bjornfor ]; - }; -} diff --git a/pkgs/applications/misc/hivemind/default.nix b/pkgs/applications/misc/hivemind/default.nix index 84f5bad24d2..e452ec0511e 100644 --- a/pkgs/applications/misc/hivemind/default.nix +++ b/pkgs/applications/misc/hivemind/default.nix @@ -2,14 +2,14 @@ buildGoPackage rec { pname = "hivemind"; - version = "1.0.4"; + version = "1.0.6"; goPackagePath = "github.com/DarthSim/hivemind"; src = fetchFromGitHub { owner = "DarthSim"; repo = "hivemind"; rev = "v${version}"; - sha256 = "1z2izvyf0j3gi0cas5v22kkmkls03sg67182k8v3p6kwhzn0jw67"; + sha256 = "0afcnd03wsdphbbpha65rv5pnv0x6ldnnm6rnv1m6xkkywgnzx95"; }; meta = with stdenv.lib; { diff --git a/pkgs/applications/misc/hugo/default.nix b/pkgs/applications/misc/hugo/default.nix index 4667427b8a0..d6f8983c5ee 100644 --- a/pkgs/applications/misc/hugo/default.nix +++ b/pkgs/applications/misc/hugo/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "hugo"; - version = "0.60.1"; + version = "0.61.0"; goPackagePath = "github.com/gohugoio/hugo"; @@ -10,10 +10,10 @@ buildGoModule rec { owner = "gohugoio"; repo = pname; rev = "v${version}"; - sha256 = "0l8n87y5zrs09s693rqvqwz0233wlr4jwib7r36ilss1qgm7x6n5"; + sha256 = "1ad70g4gb44dk48pbgk48jzs44b6l7ksxb739ahp7vs1nyvvgffr"; }; - modSha256 = "1an4plbx06fzz2iqzgs08r6vsjpkl5lbqck5jqmv6fv7b7psf7iw"; + modSha256 = "1jb1iqlp1005aj8smcgznmwnqaysi5g5wcsj8nvvm70hhc9j8wns"; buildFlags = "-tags extended"; diff --git a/pkgs/applications/misc/kitty/default.nix b/pkgs/applications/misc/kitty/default.nix index cd04fdb2574..0a65f2532d6 100644 --- a/pkgs/applications/misc/kitty/default.nix +++ b/pkgs/applications/misc/kitty/default.nix @@ -1,4 +1,4 @@ -{ stdenv, substituteAll, fetchFromGitHub, python3Packages, glfw, libunistring, +{ stdenv, substituteAll, fetchFromGitHub, python3Packages, libunistring, harfbuzz, fontconfig, pkgconfig, ncurses, imagemagick, xsel, libstartup_notification, libGL, libX11, libXrandr, libXinerama, libXcursor, libxkbcommon, libXi, libXext, wayland-protocols, wayland, @@ -45,7 +45,7 @@ buildPythonApplication rec { python3 zlib ] ++ stdenv.lib.optionals stdenv.isLinux [ - fontconfig glfw libunistring libcanberra libX11 + fontconfig libunistring libcanberra libX11 libXrandr libXinerama libXcursor libxkbcommon libXi libXext wayland-protocols wayland dbus ]; @@ -64,9 +64,13 @@ buildPythonApplication rec { outputs = [ "out" "terminfo" ]; patches = [ + ./fix-paths.patch + ] ++ stdenv.lib.optionals stdenv.isLinux [ (substituteAll { - src = ./fix-paths.patch; + src = ./library-paths.patch; libstartup_notification = "${libstartup_notification}/lib/libstartup-notification-1.so"; + libcanberra = "${libcanberra}/lib/libcanberra.so"; + libEGL = "${stdenv.lib.getLib libGL}/lib/libEGL.so.1"; }) ] ++ stdenv.lib.optionals stdenv.isDarwin [ ./no-lto.patch @@ -74,10 +78,6 @@ buildPythonApplication rec { ./png2icns.patch ]; - preConfigure = stdenv.lib.optional (!stdenv.isDarwin) '' - substituteInPlace glfw/egl_context.c --replace "libEGL.so.1" "${stdenv.lib.getLib libGL}/lib/libEGL.so.1" - ''; - buildPhase = if stdenv.isDarwin then '' ${python.interpreter} setup.py kitty.app --update-check-interval=0 '' else '' diff --git a/pkgs/applications/misc/kitty/fix-paths.patch b/pkgs/applications/misc/kitty/fix-paths.patch index 70460581307..380f6d74914 100644 --- a/pkgs/applications/misc/kitty/fix-paths.patch +++ b/pkgs/applications/misc/kitty/fix-paths.patch @@ -1,14 +1,3 @@ ---- a/kitty/desktop.c -+++ b/kitty/desktop.c -@@ -30,7 +30,7 @@ - static PyObject* - init_x11_startup_notification(PyObject UNUSED *self, PyObject *args) { - static bool done = false; -- static const char* libname = "libstartup-notification-1.so"; -+ static const char* libname = "@libstartup_notification@"; - // some installs are missing the .so symlink, so try the full name - static const char* libname2 = "libstartup-notification-1.so.0"; - --- a/docs/Makefile +++ b/docs/Makefile @@ -3,7 +3,7 @@ diff --git a/pkgs/applications/misc/kitty/library-paths.patch b/pkgs/applications/misc/kitty/library-paths.patch new file mode 100644 index 00000000000..5f8daacc3c2 --- /dev/null +++ b/pkgs/applications/misc/kitty/library-paths.patch @@ -0,0 +1,32 @@ +--- a/glfw/egl_context.c ++++ b/glfw/egl_context.c +@@ -314,7 +314,7 @@ bool _glfwInitEGL(void) + #elif defined(__CYGWIN__) + "libEGL-1.so", + #else +- "libEGL.so.1", ++ "@libEGL@", + #endif + NULL + }; + +--- a/kitty/desktop.c ++++ b/kitty/desktop.c +@@ -30,7 +30,7 @@ + static PyObject* + init_x11_startup_notification(PyObject UNUSED *self, PyObject *args) { + static bool done = false; +- static const char* libname = "libstartup-notification-1.so"; ++ static const char* libname = "@libstartup_notification@"; + // some installs are missing the .so symlink, so try the full name + static const char* libname2 = "libstartup-notification-1.so.0"; + static const char* libname3 = "libstartup-notification-1.so.0.0.0"; +@@ -105,7 +105,7 @@ load_libcanberra_functions(void) { + + static void + load_libcanberra(void) { +- static const char* libname = "libcanberra.so"; ++ static const char* libname = "@libcanberra@"; + // some installs are missing the .so symlink, so try the full name + static const char* libname2 = "libcanberra.so.0"; + static const char* libname3 = "libcanberra.so.0.2.5"; diff --git a/pkgs/applications/misc/latte-dock/default.nix b/pkgs/applications/misc/latte-dock/default.nix index 0bd91994418..f3daedfb96b 100644 --- a/pkgs/applications/misc/latte-dock/default.nix +++ b/pkgs/applications/misc/latte-dock/default.nix @@ -3,11 +3,11 @@ mkDerivation rec { pname = "latte-dock"; - version = "0.8.9"; + version = "0.9.5"; src = fetchurl { url = "https://download.kde.org/stable/${pname}/${pname}-${version}.tar.xz"; - sha256 = "1kkpxa39crjpqgamrcpgp1mrcdg0aq9850yb6cf7lw7d3x2fdrxj"; + sha256 = "1g8a2lmg9agcs2kwbwh6sj9hkrbzad7bkxk39nx5536svnifbg1c"; name = "${pname}-${version}.tar.xz"; }; diff --git a/pkgs/applications/misc/multibootusb/default.nix b/pkgs/applications/misc/multibootusb/default.nix index 14201483294..ab8802a1b69 100644 --- a/pkgs/applications/misc/multibootusb/default.nix +++ b/pkgs/applications/misc/multibootusb/default.nix @@ -52,17 +52,6 @@ python36Packages.buildPythonApplication rec { python36Packages.six ]; - makeWrapperArgs = [ - # Firstly, add all necessary QT variables - "\${qtWrapperArgs[@]}" - - # Then, add the installed scripts/ directory to the python path - "--prefix" "PYTHONPATH" ":" "$out/lib/${python36Packages.python.libPrefix}/site-packages" - - # Finally, move to directory that contains data - "--run" "\"cd $out/share/${pname}\"" - ]; - postInstall = '' # This script doesn't work and it doesn't add much anyway rm $out/bin/multibootusb-pkexec @@ -72,6 +61,19 @@ python36Packages.buildPythonApplication rec { cp -r data "$out/share/${pname}/data" ''; + preFixup = '' + makeWrapperArgs+=( + # Firstly, add all necessary QT variables + "''${qtWrapperArgs[@]}" + + # Then, add the installed scripts/ directory to the python path + --prefix "PYTHONPATH" ":" "$out/lib/${python36Packages.python.libPrefix}/site-packages" + + # Finally, move to directory that contains data + --run "cd $out/share/${pname}" + ) + ''; + meta = with stdenv.lib; { description = "Multiboot USB creator for Linux live disks"; homepage = http://multibootusb.org/; diff --git a/pkgs/applications/misc/plover/default.nix b/pkgs/applications/misc/plover/default.nix index 77e93eaba7e..8ecc4f974b4 100644 --- a/pkgs/applications/misc/plover/default.nix +++ b/pkgs/applications/misc/plover/default.nix @@ -47,8 +47,9 @@ propagatedBuildInputs = [ Babel pyqt5 xlib pyserial appdirs wcwidth setuptools ]; dontWrapQtApps = true; - makeWrapperArgs = [ - "\${qtWrapperArgs[@]}" - ]; + + preFixup = '' + makeWrapperArgs+=("''${qtWrapperArgs[@]}") + ''; }; } diff --git a/pkgs/applications/misc/pmenu/default.nix b/pkgs/applications/misc/pmenu/default.nix deleted file mode 100644 index bd3796a572b..00000000000 --- a/pkgs/applications/misc/pmenu/default.nix +++ /dev/null @@ -1,36 +0,0 @@ -{ stdenv, fetchFromGitLab, python2Packages, gnome-menus }: - -stdenv.mkDerivation { - pname = "pmenu"; - version = "2018-01-01"; - - src = fetchFromGitLab { - owner = "o9000"; - repo = "pmenu"; - rev = "f98a5bdf20deb0b7f0543e5ce6a8f5574f695e07"; - sha256 = "131nqafbmbfpgsgss27pz4cyb9fb29m5h1ai1fyvcn286rr9dnp2"; - }; - - nativeBuildInputs = [ python2Packages.wrapPython ]; - - buildInputs = [ python2Packages.pygtk gnome-menus ]; - - pythonPath = [ python2Packages.pygtk ]; - - installPhase = '' - mkdir -p $out/bin $out/share/applications - ./install.sh $out - ''; - - postFixup = '' - wrapPythonPrograms - ''; - - meta = { - homepage = https://gitlab.com/o9000/pmenu; - description = "Start menu for Linux/BSD"; - license = stdenv.lib.licenses.gpl2; - platforms = stdenv.lib.platforms.unix; - maintainers = [ stdenv.lib.maintainers.romildo ]; - }; -} diff --git a/pkgs/applications/misc/prusa-slicer/default.nix b/pkgs/applications/misc/prusa-slicer/default.nix index 154b974e644..caf4f270a15 100644 --- a/pkgs/applications/misc/prusa-slicer/default.nix +++ b/pkgs/applications/misc/prusa-slicer/default.nix @@ -9,7 +9,7 @@ let in stdenv.mkDerivation rec { pname = "prusa-slicer"; - version = "2.1.0"; + version = "2.1.1"; enableParallelBuilding = true; @@ -59,7 +59,7 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "prusa3d"; repo = "PrusaSlicer"; - sha256 = "172nz01iiqfjzkpcbl78j6almq6av70l71jgrzrcdw6ham1wqnpr"; + sha256 = "0i393nbc2salb4j5l2hvy03ng7hmf90d2xj653pw9bsikhj0r3jd"; rev = "version_${version}"; }; diff --git a/pkgs/applications/misc/raiseorlaunch/default.nix b/pkgs/applications/misc/raiseorlaunch/default.nix new file mode 100644 index 00000000000..6bbbc671bf8 --- /dev/null +++ b/pkgs/applications/misc/raiseorlaunch/default.nix @@ -0,0 +1,23 @@ +{ lib, python3Packages }: + +python3Packages.buildPythonApplication rec { + pname = "raiseorlaunch"; + version = "2.3.3"; + + src = python3Packages.fetchPypi { + inherit pname version; + sha256 = "3d694015d020a888b42564d56559213b94981ca2b32b952a49b2de4d029d2e59"; + }; + + nativeBuildInputs = [ python3Packages.setuptools_scm ]; + checkInputs = [ python3Packages.pytest ]; + pythonPath = with python3Packages; [ i3ipc ]; + + meta = with lib; { + maintainers = with maintainers; [ winpat ]; + description = "A run-or-raise-application-launcher for i3 window manager"; + homepage = "https://github.com/open-dynaMIX/raiseorlaunch"; + license = licenses.mit; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/redis-desktop-manager/default.nix b/pkgs/applications/misc/redis-desktop-manager/default.nix index 25f9c6ed4c7..71d79b88f44 100644 --- a/pkgs/applications/misc/redis-desktop-manager/default.nix +++ b/pkgs/applications/misc/redis-desktop-manager/default.nix @@ -1,11 +1,11 @@ -{ stdenv, lib, fetchgit, pkgconfig, libssh2 +{ stdenv, lib, fetchFromGitHub, fetchFromGitiles, pkgconfig, libssh2 , qtbase, qtdeclarative, qtgraphicaleffects, qtimageformats, qtquickcontrols , qtsvg, qttools, qtquick1, qtcharts , qmake }: let - breakpad_lss = fetchgit { + breakpad_lss = fetchFromGitiles { url = "https://chromium.googlesource.com/linux-syscall-support"; rev = "08056836f2b4a5747daff75435d10d649bed22f6"; sha256 = "1ryshs2nyxwa0kn3rlbnd5b3fhna9vqm560yviddcfgdm2jyg0hz"; @@ -17,10 +17,11 @@ stdenv.mkDerivation rec { pname = "redis-desktop-manager"; version = "0.9.1"; - src = fetchgit { - url = "https://github.com/uglide/RedisDesktopManager.git"; + src = fetchFromGitHub { + owner = "uglide"; + repo = "RedisDesktopManager"; fetchSubmodules = true; - rev = "refs/tags/${version}"; + rev = version; sha256 = "0yd4i944d4blw8jky0nxl7sfkkj975q4d328rdcbhizwvf6dx81f"; }; diff --git a/pkgs/applications/misc/taizen/default.nix b/pkgs/applications/misc/taizen/default.nix new file mode 100644 index 00000000000..ee516ac97aa --- /dev/null +++ b/pkgs/applications/misc/taizen/default.nix @@ -0,0 +1,25 @@ +{ rustPlatform, lib, fetchFromGitHub, ncurses, openssl, pkgconfig }: + +rustPlatform.buildRustPackage rec { + pname = "taizen"; + version = "0.1.0"; + + src = fetchFromGitHub { + owner = "NerdyPepper"; + repo = pname; + rev = "5c1876429e2da7424e9d31b1e16f5a3147cc58d0"; + sha256 = "09izgx7icvizskdy9kplk0am61p7550fsd0v42zcihq2vap2j92z"; + }; + + buildInputs = [ ncurses openssl ]; + nativeBuildInputs = [ pkgconfig ]; + + cargoSha256 = "0h8ybhb17pqhhfjcmq1l70kp8g1yyq38228lcf86byk3r2ar2rkg"; + + meta = with lib; { + homepage = https://crates.io/crates/taizen; + license = licenses.mit; + description = "curses based mediawiki browser"; + maintainers = with maintainers; [ ma27 ]; + }; +} diff --git a/pkgs/applications/misc/vym/default.nix b/pkgs/applications/misc/vym/default.nix index 6dfe8e713c6..a5024cb7f36 100644 --- a/pkgs/applications/misc/vym/default.nix +++ b/pkgs/applications/misc/vym/default.nix @@ -1,18 +1,45 @@ -{ stdenv, fetchurl, pkgconfig, qmake, qtsvg }: +{ stdenv, mkDerivation, fetchurl, pkgconfig, qmake, qtscript, qtsvg }: -stdenv.mkDerivation rec { +mkDerivation rec { pname = "vym"; - version = "2.6.11"; + version = "2.7.0"; src = fetchurl { - url = "mirror://sourceforge/project/vym/2.6.0/${pname}-${version}.tar.bz2"; - sha256 = "1yznlb47jahd662a2blgh1ccwpl5dp5rjz9chsxjzhj3vbkzx3nl"; + url = "mirror://sourceforge/project/vym/${version}/${pname}-${version}.tar.bz2"; + sha256 = "1rnrfqlff7wv6yni8bvff8n90pmn82k82zd4sn1jsx9r1n3qsfkh"; }; + # Hardcoded paths scattered about all have form share/vym + # which is encouraging, although we'll need to patch them (below). + qmakeFlags = [ + "DATADIR=${placeholder "out"}/share" + "DOCDIR=${placeholder "out"}/share/doc/vym" + ]; + + postPatch = '' + for x in \ + exportoofiledialog.cpp \ + main.cpp \ + mainwindow.cpp \ + tex/*.{tex,lyx}; \ + do + substituteInPlace $x \ + --replace /usr/share/vym $out/share/vym \ + --replace /usr/local/share/vym $out/share/vym \ + --replace /usr/share/doc $out/share/doc/vym + done + ''; + hardeningDisable = [ "format" ]; nativeBuildInputs = [ pkgconfig qmake ]; - buildInputs = [ qtsvg ]; + buildInputs = [ qtscript qtsvg ]; + + postInstall = '' + install -Dm755 -t $out/share/man/man1 doc/*.1.gz + ''; + + dontGzipMan = true; meta = with stdenv.lib; { description = "A mind-mapping software"; diff --git a/pkgs/applications/misc/wtf/default.nix b/pkgs/applications/misc/wtf/default.nix index f20c4aff169..3dee9844c0c 100644 --- a/pkgs/applications/misc/wtf/default.nix +++ b/pkgs/applications/misc/wtf/default.nix @@ -7,16 +7,16 @@ buildGoModule rec { pname = "wtf"; - version = "0.24.0"; + version = "0.25.0"; src = fetchFromGitHub { owner = "wtfutil"; repo = pname; rev = "v${version}"; - sha256 = "0jz7hjcm0hfxcih2zplp47wx6lyvhhzj9ka4ljqrx0i4l7cm9ahs"; + sha256 = "1g76hzlyi8s8dayd36cs4bhnwgrrr731ybflw3xk5pgkgcbs14sd"; }; - modSha256 = "04d8hvd90f7v853p23xcx38qz3ryv7kz7zjk9b131cjnd4mcv0sm"; + modSha256 = "186m7s20r59dyh5lpby4sd4vw3rvnkfzslylwin0c3r6150yrx8h"; buildFlagsArray = [ "-ldflags=-s -w -X main.version=${version}" ]; diff --git a/pkgs/applications/misc/xmr-stak/default.nix b/pkgs/applications/misc/xmr-stak/default.nix index 4d7b54536e4..b6f05ea3094 100644 --- a/pkgs/applications/misc/xmr-stak/default.nix +++ b/pkgs/applications/misc/xmr-stak/default.nix @@ -12,13 +12,13 @@ in stdenv'.mkDerivation rec { name = "xmr-stak-${version}"; - version = "2.10.7"; + version = "2.10.8"; src = fetchFromGitHub { owner = "fireice-uk"; repo = "xmr-stak"; rev = version; - sha256 = "1p8hx8gwnv7a49pffq1xmzmrfi3gs6dyra9dn2xi7cl75yn9kfhm"; + sha256 = "0ilx5mhh91ks7dwvykfyynh53l6vkkignjpwkkss8ss6b2k8gdbj"; }; NIX_CFLAGS_COMPILE = "-O3"; diff --git a/pkgs/applications/networking/browsers/chromium/browser.nix b/pkgs/applications/networking/browsers/chromium/browser.nix index ad7fa78527c..bbfce71a115 100644 --- a/pkgs/applications/networking/browsers/chromium/browser.nix +++ b/pkgs/applications/networking/browsers/chromium/browser.nix @@ -61,7 +61,7 @@ mkChromiumDerivation (base: rec { meta = { description = "An open source web browser from Google"; homepage = http://www.chromium.org/; - maintainers = with maintainers; [ bendlas ivan ]; + maintainers = with maintainers; [ bendlas ivan thefloweringash ]; license = if enableWideVine then licenses.unfree else licenses.bsd3; platforms = platforms.linux; hydraPlatforms = if channel == "stable" then ["aarch64-linux" "x86_64-linux"] else []; diff --git a/pkgs/applications/networking/browsers/chromium/common.nix b/pkgs/applications/networking/browsers/chromium/common.nix index d49e2d73122..7ce1c35e9eb 100644 --- a/pkgs/applications/networking/browsers/chromium/common.nix +++ b/pkgs/applications/networking/browsers/chromium/common.nix @@ -23,7 +23,6 @@ , libva ? null # useVaapi # package customization -, enableNaCl ? false , useVaapi ? false , gnomeSupport ? false, gnome ? null , gnomeKeyringSupport ? false, libgnome-keyring3 ? null @@ -136,10 +135,8 @@ let ./patches/nix_plugin_paths_68.patch ./patches/remove-webp-include-69.patch ./patches/no-build-timestamps.patch - ] ++ optionals (channel == "stable") [ - ./patches/widevine.patch - ] ++ optionals (channel == "beta" || channel == "dev") [ ./patches/widevine-79.patch + ./patches/dont-use-ANGLE-by-default.patch # Unfortunately, chromium regularly breaks on major updates and # then needs various patches backported in order to be compiled with GCC. # Good sources for such patches and other hints: @@ -230,7 +227,12 @@ let use_sysroot = false; use_gnome_keyring = gnomeKeyringSupport; use_gio = gnomeSupport; - enable_nacl = enableNaCl; + # ninja: error: '../../native_client/toolchain/linux_x86/pnacl_newlib/bin/x86_64-nacl-objcopy', + # needed by 'nacl_irt_x86_64.nexe', missing and no known rule to make it + enable_nacl = false; + # Enabling the Widevine component here doesn't affect whether we can + # redistribute the chromium package; the Widevine component is either + # added later in the wrapped -wv build or downloaded from Google. enable_widevine = true; use_cups = cupsSupport; diff --git a/pkgs/applications/networking/browsers/chromium/default.nix b/pkgs/applications/networking/browsers/chromium/default.nix index 369367bae42..c3522e17379 100644 --- a/pkgs/applications/networking/browsers/chromium/default.nix +++ b/pkgs/applications/networking/browsers/chromium/default.nix @@ -1,4 +1,4 @@ -{ newScope, config, stdenv, llvmPackages_8 +{ newScope, config, stdenv, llvmPackages_9 , makeWrapper, ed , glib, gtk3, gnome3, gsettings-desktop-schemas , libva ? null @@ -7,7 +7,6 @@ # package customization , channel ? "stable" -, enableNaCl ? false , gnomeSupport ? false, gnome ? null , gnomeKeyringSupport ? false , proprietaryCodecs ? true @@ -20,8 +19,8 @@ }: let - stdenv = llvmPackages_8.stdenv; - llvmPackages = llvmPackages_8; + stdenv = llvmPackages_9.stdenv; + llvmPackages = llvmPackages_9; callPackage = newScope chromium; @@ -31,9 +30,7 @@ let upstream-info = (callPackage ./update.nix {}).getChannel channel; mkChromiumDerivation = callPackage ./common.nix { - inherit enableNaCl gnomeSupport gnome - gnomeKeyringSupport proprietaryCodecs cupsSupport pulseSupport - useVaapi; + inherit gnome gnomeSupport gnomeKeyringSupport proprietaryCodecs cupsSupport pulseSupport useVaapi; }; browser = callPackage ./browser.nix { inherit channel enableWideVine; }; @@ -44,8 +41,8 @@ let }; mkrpath = p: "${lib.makeSearchPathOutput "lib" "lib64" p}:${lib.makeLibraryPath p}"; - widevine = let upstream-info = chromium.upstream-info; in stdenv.mkDerivation { - name = "chromium-binary-plugin-widevine"; + widevineCdm = let upstream-info = chromium.upstream-info; in stdenv.mkDerivation { + name = "chrome-widevine-cdm"; # The .deb file for Google Chrome src = upstream-info.binary; @@ -55,21 +52,25 @@ let phases = [ "unpackPhase" "patchPhase" "installPhase" "checkPhase" ]; unpackCmd = let - soPath = + widevineCdmPath = if upstream-info.channel == "stable" then - "./opt/google/chrome/WidevineCdm/_platform_specific/linux_x64/libwidevinecdm.so" + "./opt/google/chrome/WidevineCdm" else if upstream-info.channel == "beta" then - "./opt/google/chrome-beta/WidevineCdm/_platform_specific/linux_x64/libwidevinecdm.so" + "./opt/google/chrome-beta/WidevineCdm" else if upstream-info.channel == "dev" then - "./opt/google/chrome-unstable/WidevineCdm/_platform_specific/linux_x64/libwidevinecdm.so" + "./opt/google/chrome-unstable/WidevineCdm" else throw "Unknown chromium channel."; in '' - mkdir -p plugins - # Extract just libwidevinecdm.so from upstream's .deb file - ar p "$src" data.tar.xz | tar xJ -C plugins ${soPath} - mv plugins/${soPath} plugins/ - rm -rf plugins/opt + # Extract just WidevineCdm from upstream's .deb file + ar p "$src" data.tar.xz | tar xJ "${widevineCdmPath}" + + # Move things around so that we don't have to reference a particular + # chrome-* directory later. + mv "${widevineCdmPath}" ./ + + # unpackCmd wants a single output directory; let it take WidevineCdm/ + rm -rf opt ''; doCheck = true; @@ -80,12 +81,12 @@ let PATCH_RPATH = mkrpath [ gcc.cc glib nspr nss ]; patchPhase = '' - patchelf --set-rpath "$PATCH_RPATH" libwidevinecdm.so + patchelf --set-rpath "$PATCH_RPATH" _platform_specific/linux_x64/libwidevinecdm.so ''; installPhase = '' - install -vD libwidevinecdm.so \ - "$out/lib/libwidevinecdm.so" + mkdir -p $out/WidevineCdm + cp -a * $out/WidevineCdm/ ''; meta = { @@ -102,15 +103,14 @@ let # We want users to be able to enableWideVine without rebuilding all of # chromium, so we have a separate derivation here that copies chromium - # and adds the unfree libwidevinecdm.so. + # and adds the unfree WidevineCdm. chromiumWV = let browser = chromium.browser; in if enableWideVine then runCommand (browser.name + "-wv") { version = browser.version; } '' mkdir -p $out cp -a ${browser}/* $out/ chmod u+w $out/libexec/chromium - mkdir -p $out/libexec/chromium/WidevineCdm/_platform_specific/linux_x64 - cp ${widevine}/lib/libwidevinecdm.so $out/libexec/chromium/WidevineCdm/_platform_specific/linux_x64/ + cp -a ${widevineCdm}/WidevineCdm $out/libexec/chromium/ '' else browser; in stdenv.mkDerivation { diff --git a/pkgs/applications/networking/browsers/chromium/patches/dont-use-ANGLE-by-default.patch b/pkgs/applications/networking/browsers/chromium/patches/dont-use-ANGLE-by-default.patch new file mode 100644 index 00000000000..9f14a304eb3 --- /dev/null +++ b/pkgs/applications/networking/browsers/chromium/patches/dont-use-ANGLE-by-default.patch @@ -0,0 +1,26 @@ +A field trial currently enables the passthrough command decoder, which causes +gl_factory.cc to try kGLImplementationEGLANGLE first, which causes Chromium to fail +to load libGLESv2.so on NixOS. It somehow does not try kGLImplementationDesktopGL, +and so there is no GL support at all. + +Revert to using the validating command decoder, which prevents gl_factory.cc +from touching allowed_impls, allowing it to successfully use kGLImplementationDesktopGL. + +diff --git a/ui/gl/gl_utils.cc b/ui/gl/gl_utils.cc +index 697cbed5fe2d..8419bdb21a2f 100644 +--- a/ui/gl/gl_utils.cc ++++ b/ui/gl/gl_utils.cc +@@ -71,9 +71,10 @@ bool UsePassthroughCommandDecoder(const base::CommandLine* command_line) { + } else if (switch_value == kCmdDecoderValidatingName) { + return false; + } else { +- // Unrecognized or missing switch, use the default. +- return base::FeatureList::IsEnabled( +- features::kDefaultPassthroughCommandDecoder); ++ // Ignore the field trial that enables it; disable it until ++ // gl_factory.cc kGLImplementationEGLANGLE issues are sorted ++ // out on NixOS. ++ return false; + } + } + } diff --git a/pkgs/applications/networking/browsers/chromium/patches/widevine-79.patch b/pkgs/applications/networking/browsers/chromium/patches/widevine-79.patch index 1a3ab33e36f..32f0ae2fb5e 100644 --- a/pkgs/applications/networking/browsers/chromium/patches/widevine-79.patch +++ b/pkgs/applications/networking/browsers/chromium/patches/widevine-79.patch @@ -1,11 +1,13 @@ -diff --git a/third_party/widevine/cdm/widevine_cdm_version.h b/third_party/widevine/cdm/widevine_cdm_version.h -index dd6efed02646..4d8b2b7d85f7 100644 ---- a/third_party/widevine/cdm/widevine_cdm_version.h -+++ b/third_party/widevine/cdm/widevine_cdm_version.h -@@ -11,5 +11,6 @@ - // If the Widevine CDM is available define the following: - // - WIDEVINE_CDM_VERSION_STRING (with the version of the CDM that's available - // as a string, e.g., "1.0.123.456"). -+#define WIDEVINE_CDM_VERSION_STRING "undefined" +diff --git a/third_party/widevine/cdm/BUILD.gn b/third_party/widevine/cdm/BUILD.gn +index ed0e2f5208b..5b431a030d5 100644 +--- a/third_party/widevine/cdm/BUILD.gn ++++ b/third_party/widevine/cdm/BUILD.gn +@@ -14,7 +14,7 @@ buildflag_header("buildflags") { - #endif // WIDEVINE_CDM_VERSION_H_ + flags = [ + "ENABLE_WIDEVINE=$enable_widevine", +- "BUNDLE_WIDEVINE_CDM=$bundle_widevine_cdm", ++ "BUNDLE_WIDEVINE_CDM=true", + "ENABLE_WIDEVINE_CDM_COMPONENT=$enable_widevine_cdm_component", + ] + } diff --git a/pkgs/applications/networking/browsers/chromium/patches/widevine.patch b/pkgs/applications/networking/browsers/chromium/patches/widevine.patch deleted file mode 100644 index 2de6024141d..00000000000 --- a/pkgs/applications/networking/browsers/chromium/patches/widevine.patch +++ /dev/null @@ -1,24 +0,0 @@ -Description: enable widevine and set its version string to "undefined" -Author: Michael Gilbert <mgilbert@debian.org> -Author: Olivier Tilloy <olivier.tilloy@canonical.com> - ---- a/third_party/widevine/cdm/widevine_cdm_version.h -+++ b/third_party/widevine/cdm/widevine_cdm_version.h -@@ -11,5 +11,6 @@ - // If the Widevine CDM is available define the following: - // - WIDEVINE_CDM_VERSION_STRING (with the version of the CDM that's available - // as a string, e.g., "1.0.123.456"). -+#define WIDEVINE_CDM_VERSION_STRING "undefined" - - #endif // WIDEVINE_CDM_VERSION_H_ ---- a/chrome/common/chrome_content_client.cc -+++ b/chrome/common/chrome_content_client.cc -@@ -99,7 +99,7 @@ - // Registers Widevine CDM if Widevine is enabled, the Widevine CDM is - // bundled and not a component. When the Widevine CDM is a component, it is - // registered in widevine_cdm_component_installer.cc. --#if BUILDFLAG(BUNDLE_WIDEVINE_CDM) && !BUILDFLAG(ENABLE_WIDEVINE_CDM_COMPONENT) -+#if !BUILDFLAG(ENABLE_WIDEVINE_CDM_COMPONENT) - #define REGISTER_BUNDLED_WIDEVINE_CDM - #include "third_party/widevine/cdm/widevine_cdm_common.h" // nogncheck - // TODO(crbug.com/663554): Needed for WIDEVINE_CDM_VERSION_STRING. Support diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix index bc1b5e9b23c..f107ebffb11 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix @@ -1,18 +1,18 @@ # This file is autogenerated from update.sh in the same directory. { beta = { - sha256 = "0sm6x4z6i6p292l98k0h0v69f29hgfd9l46jg8xbh2jzg9f5fp78"; - sha256bin64 = "1yvy0d2h09cf1w42c93kpw66a2v9yn079zs6qjiqzs07yzxvxjdm"; - version = "79.0.3945.36"; + sha256 = "1wxw4l4hhk91x7drcamaxvh03ckxwv5567ccmpk743vb74nkd9z1"; + sha256bin64 = "1fzgdfph2jj3rac868y3r0mlgqj740bivrgh1nq51v3ni507366n"; + version = "79.0.3945.79"; }; dev = { - sha256 = "0zf434ijk6zw37fricnkb1968nhmb7zlfivf59nx9yh7irbwb4hm"; - sha256bin64 = "1fphf8pwbbirs9fiislg3vav8c4a393lz487sa7f90mzsx84ffiz"; - version = "80.0.3964.0"; + sha256 = "18ijz7ailnmmz6b9n1jkdj0v8wiqdr845xzi0f7n5xcp4wf7xafk"; + sha256bin64 = "19irp7x44h49cs1wvwv34jl0inwxk0g6vb44p4ab1jmfmdznv9lx"; + version = "80.0.3983.2"; }; stable = { - sha256 = "03jvfz68nvmmrplygf96sh0l347p4h03c8vpw8yrglh6ycwkiigr"; - sha256bin64 = "1knsrdh4vj1zl3v1frzrvzg0pwb64zhq2il7pwskrfcbmsj3gkh6"; - version = "78.0.3904.108"; + sha256 = "1wxw4l4hhk91x7drcamaxvh03ckxwv5567ccmpk743vb74nkd9z1"; + sha256bin64 = "0dygich61ldy20bqcc84c396vkarmjp1syhyslzkg9kwn9xzr7gb"; + version = "79.0.3945.79"; }; } diff --git a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix index 426bba57fb2..cdd6415fc41 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix @@ -1,965 +1,965 @@ { - version = "72.0b1"; + version = "72.0b4"; sources = [ - { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b1/linux-x86_64/ach/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b4/linux-x86_64/ach/firefox-72.0b4.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha512 = "55cc69b488b159bb93bf73c2033642f686aeee84ea1a1a1b194af9108db47f948c602c59392e12a30a8e12604671f8535dcb95e1eb3e5fe91805a36965860f82"; + sha512 = "10778f9e5d8514bcfa645b677fc5fd67af9adfbb425eaccc28698a02e628e96e47a14c7d90d5e30ab7a4a8a2787ff6d9c28dea4a53760843421d56f7cf8374df"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b1/linux-x86_64/af/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b4/linux-x86_64/af/firefox-72.0b4.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha512 = "3f4ca618254b23b62500dc6c4a6f516def11e9916bcd5319e94608ad439b3760eb0c29d1375c7376e6d2c9fd049f06466b5ff13763a96abe146936ddc660f2dc"; + sha512 = "c902ab0e753d6580c523140c723725862794234cfee94a4a2839e450435cbbfe60a761726e5034e5899dd2157e24a6ca0a9f64325447a94ab3a8247ad26e2af1"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b1/linux-x86_64/an/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b4/linux-x86_64/an/firefox-72.0b4.tar.bz2"; locale = "an"; arch = "linux-x86_64"; - sha512 = "ccfb24fda35b1feab11ad9956abcb6ec4aeddecf09e909429b1d4cc58a2586094770ddef83f8a7b69910525fd37e4cd22d9a75701746a409dd1c8a6e50bdaa36"; + sha512 = "cea9124311c558030c669bde0c11712436b8ad3dd3e2bcaed28c8e5148e694e286882b0f1fdaa85570e84fba06d95732f5409d968bb183bedf5e5624926d70c1"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b1/linux-x86_64/ar/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b4/linux-x86_64/ar/firefox-72.0b4.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha512 = "7b30ed5ba12434dcaad0ad01c99368f5b1230d20527d3b781a8dabfafef9a5e1e341dbdb3cc96480ef232216ca608ed26f37f4add848a3e80134cb1abf1829a1"; + sha512 = "ccf0bb4ed01cb80914a1e208304ff2f5a23cec2dc7a7a5dfac52c1931e2b8b2641adc6afb1b549ff3d72440a480dd9effefe016f211952fd7d25df75e2821f72"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b1/linux-x86_64/ast/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/72.0b4/linux-x86_64/ast/firefox-72.0b4.tar.bz2"; 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} - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/te/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/te/firefox-72.0b4.tar.bz2"; locale = "te"; arch = "linux-i686"; - sha512 = "c55d3d2ec945c3afed6fce72b8a044931d2dbbf3e09c9a6f4143249d6d767417d85ad42520899dc6ed25422213449bdd5cfb0c8225118ace38d9f6d981a11bde"; + sha512 = "3d73e89551abb41f8aa94012edd7fe132b7e3b61bcd00622ee84647eeda32f612ec3ac57c439500e94cd46c5bd3615843ff55e0b9dc9fa13b92d0260fd483c8c"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/th/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/th/firefox-72.0b4.tar.bz2"; locale = "th"; arch = "linux-i686"; - sha512 = "8be6cb5a52f2a5ac9c6583a998fd8d0a0e5ba435252d99072a65bca64642e9104e814e6cf2836060d59d31aaeda2ef501175955b6558e5a89c1295567df1ff34"; + sha512 = "0359d465e62c5efac6f8b23d12549450562bf4eaec6cf185c5d6d29c9ec2a48c41b5b0cac090b135faccdc8ecadf0198a7b4b9df1d9f7bf5ff1662ba5c0d8148"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/tl/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/tl/firefox-72.0b4.tar.bz2"; locale = "tl"; arch = "linux-i686"; - sha512 = "ab8be21c0718a7f99f88ddc218f634d2e3cc1879ada1108e1b2d86ebf092644bf4ae66b4515ea096eaf9bcc45e1801682e3d0447dae8958dbb62c6639c1b45f6"; + sha512 = "1d80077c7ac5a4173b273a44d1a164b39a46dae384a977bc79d2f5d9669395843e20945fb5b799e7fee678568a8ffa3b821d4603515aeac6eca7e725a7ab716c"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/tr/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/tr/firefox-72.0b4.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha512 = "1551617e0bba99cdd208b4d3ca96685eab52f0ececd2a90b6863f36fa06dd2198f727074be7c3ae3564ec33bb63d0ae38dd9adcb91d9992c0ec64d522e69d988"; + sha512 = "fb5f1e93b017d3f3f9a1008923686a6acea170618ebd3cc52e1e0ec5ba369c6cf5406126689d3bbc05bee63c52b086617925ebe33ade0363d138eb200b52d5f1"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/trs/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/trs/firefox-72.0b4.tar.bz2"; locale = "trs"; arch = "linux-i686"; - sha512 = "0f6d88d37e7d81675f333c11ae0b62285367e331f6683dc43eb231f648131e6af3e25d9cdb73fe0871fd6a36ca2d01145529e6d5c1edcc7068926e8e2451d5d9"; + sha512 = "a5935de8cde85d6ec031e312bbe55c39d43db206b981b7513dbd78d9e344692226ee439c548b4e26cd73db49e0b5d57d77c4928995aea326fe1e94c3fb17af99"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/uk/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/uk/firefox-72.0b4.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha512 = "0ad678d6f91b64620b12040e69aa075053a007d8f0c9911cbc59a8c539b3f9acf81b33a1f3dda4dfba0d72c679299f2008063bfd91bddd91c0c66816875d2416"; + sha512 = "8fb43aa7e90323fd51bd2e281b5fe80c213502fe092844606cc7a3e49edf05a5d4382fd84bfe0223406da453361f869663616f33c9e16f5667cd06aca6c82874"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/ur/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/ur/firefox-72.0b4.tar.bz2"; locale = "ur"; arch = "linux-i686"; - sha512 = "225c8ce9f33343cb5deae28e53797dde1df64b036fa4407d38bddbd2a5a95ab5e1df53d094522e53757520c6b29f494a4e56fab4e17ac5dc61bfadaf3760d2c7"; + sha512 = "f25d7482bc707e7b780f30ead9156a76ed89710e47a971ad66f456794158a7d003515c5c7a70146448cccfcec4f7d920781d334096a1b27dbcf68b91dda80374"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/uz/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/uz/firefox-72.0b4.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha512 = "7198f44ddf4360f67102572524600ee8cf66ebe5602797af90bb733c8889eac34d34d3eecdb2ba4b510806048d2cabb1ef8580ffd666581f7524fce20d085320"; + sha512 = "e6b64ba6bd3d137272a0a4b5674080c35f6fb84c6c2988ce0827165112278d1c1213a15175e3c98ab032087abc721c7c95fbdf905d2e4585150a9cbdfec3e604"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/vi/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/vi/firefox-72.0b4.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha512 = "6524f38b09275553abdc3bf1e4a790fbde346f3254a555ca626a36ba7e41683aeccc40d17bc10e04ced21a758e2ca47c643dd41ccef12712e20e74db37dadee5"; + sha512 = "60df754b0f8d5a7c1fbb30552f7528de11413aaa712386815fe1f575514e5ea36421f7cd4f264d60949ffc29409ab509b9425258f9eb1c6a014f1e5d2ab30bea"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/xh/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/xh/firefox-72.0b4.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha512 = "d1ee2643509b7c24ee95bd2956e668abaee55667d2d597924283e95dab6372fb074cf5787d7ac4e6264be78f583e9fe3312342486cc4243265953a1d218232ad"; + sha512 = "24ce3035237d6e62ad6e01746c969ddc75e95013b5033d343145fbe1aec0735e588e2a964dbb074f554611a04de112b029d50139ac1a8d7c34834ac78251ebe7"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/zh-CN/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/zh-CN/firefox-72.0b4.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha512 = "b4d94914235c44f721c2d1271d8e5735300b22d85305efd83f3036062c70564a7bc4288dc5d730deb24920a317c4778896fc4a343929697c0f5c75f0f780414e"; + sha512 = "4bc556547c3d1b37c0073a255832527a8c4bd2c86c103051913c14fbeb25c9175a4b7809778a936cbcd6cad02540af914f42ebe28884474ce623f2e6f42b53db"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b1/linux-i686/zh-TW/firefox-72.0b1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/72.0b4/linux-i686/zh-TW/firefox-72.0b4.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha512 = "9cb7da1cdf5b7fb35bdcab991294e72ac035366c45869d34b50befb985d5f188c85a1f675c613a497ff92a0925890cf9d198d4afa62d63f3090e6eaeb3bcce2c"; + sha512 = "d4dd040838eb37652e4e049a0ba2bd0f09f8ec239769b79009e290693abd12d2aedb621829033698b193324c17754950c0481caf3f68830e9f1e138a62d58f94"; } ]; } diff --git a/pkgs/applications/networking/browsers/firefox/common.nix b/pkgs/applications/networking/browsers/firefox/common.nix index f17f4401236..c6dcd20d62f 100644 --- a/pkgs/applications/networking/browsers/firefox/common.nix +++ b/pkgs/applications/networking/browsers/firefox/common.nix @@ -110,7 +110,8 @@ let url = "https://raw.githubusercontent.com/archlinuxarm/PKGBUILDs/09c7fa0dc1d87922e3b464c0fa084df1227fca79/extra/firefox/build-arm-libopus.patch"; sha256 = "1zg56v3lc346fkzcjjx21vjip2s9hb2xw4pvza1dsfdnhsnzppfp"; }) - ] ++ patches; + ] ++ lib.optional (lib.versionAtLeast ffversion "71") ./fix-ff71-lto.patch + ++ patches; in diff --git a/pkgs/applications/networking/browsers/firefox/fix-ff71-lto.patch b/pkgs/applications/networking/browsers/firefox/fix-ff71-lto.patch new file mode 100644 index 00000000000..f48cad9e67a --- /dev/null +++ b/pkgs/applications/networking/browsers/firefox/fix-ff71-lto.patch @@ -0,0 +1,100 @@ +Original Patch: https://bugzilla.mozilla.org/show_bug.cgi?id=1601707#c6 + +Also fixes the issues with dom localstorage. + +--- a/dom/indexedDB/ActorsParent.cpp ++++ b/dom/indexedDB/ActorsParent.cpp +@@ -24311,11 +24311,11 @@ nsresult ObjectStoreAddOrPutRequestOp::DoDatabaseWork( + // if we allow overwrite or not. By not allowing overwrite we raise + // detectable errors rather than corrupting data. + DatabaseConnection::CachedStatement stmt; +- const auto& optReplaceDirective = (!mOverwrite || keyUnset) +- ? NS_LITERAL_CSTRING("") +- : NS_LITERAL_CSTRING("OR REPLACE "); + rv = aConnection->GetCachedStatement( +- NS_LITERAL_CSTRING("INSERT ") + optReplaceDirective + ++ NS_LITERAL_CSTRING("INSERT ") + ++ ((!mOverwrite || keyUnset) ++ ? NS_LITERAL_CSTRING("") ++ : NS_LITERAL_CSTRING("OR REPLACE ")) + + NS_LITERAL_CSTRING("INTO object_data " + "(object_store_id, key, file_ids, data) " + "VALUES (:") + +@@ -26076,9 +26076,6 @@ nsresult Cursor::OpenOp::DoIndexDatabaseWork(DatabaseConnection* aConnection) { + + const bool usingKeyRange = mOptionalKeyRange.isSome(); + +- const auto& indexTable = mCursor->mUniqueIndex +- ? NS_LITERAL_CSTRING("unique_index_data") +- : NS_LITERAL_CSTRING("index_data"); + + NS_NAMED_LITERAL_CSTRING(sortColumn, "sort_column"); + +@@ -26099,7 +26096,9 @@ nsresult Cursor::OpenOp::DoIndexDatabaseWork(DatabaseConnection* aConnection) { + "object_data.file_ids, " + "object_data.data " + "FROM ") + +- indexTable + ++ (mCursor->mUniqueIndex ++ ? NS_LITERAL_CSTRING("unique_index_data") ++ : NS_LITERAL_CSTRING("index_data")) + + NS_LITERAL_CSTRING( + " AS index_table " + "JOIN object_data " +@@ -26198,9 +26197,6 @@ nsresult Cursor::OpenOp::DoIndexKeyDatabaseWork( + + const bool usingKeyRange = mOptionalKeyRange.isSome(); + +- const auto& table = mCursor->mUniqueIndex +- ? NS_LITERAL_CSTRING("unique_index_data") +- : NS_LITERAL_CSTRING("index_data"); + + NS_NAMED_LITERAL_CSTRING(sortColumn, "sort_column"); + +@@ -26218,7 +26214,10 @@ nsresult Cursor::OpenOp::DoIndexKeyDatabaseWork( + NS_LITERAL_CSTRING( + "object_data_key " + " FROM ") + +- table + NS_LITERAL_CSTRING(" WHERE index_id = :") + ++ (mCursor->mUniqueIndex ++ ? NS_LITERAL_CSTRING("unique_index_data") ++ : NS_LITERAL_CSTRING("index_data")) + ++ NS_LITERAL_CSTRING(" WHERE index_id = :") + + kStmtParamNameId; + + const auto keyRangeClause = +diff --git a/dom/localstorage/ActorsParent.cpp b/dom/localstorage/ActorsParent.cpp +index 9c46c20670..642cef1701 100644 +--- a/dom/localstorage/ActorsParent.cpp ++++ b/dom/localstorage/ActorsParent.cpp +@@ -6959,13 +6959,10 @@ nsresult PrepareDatastoreOp::Start() { + MOZ_ASSERT(!QuotaClient::IsShuttingDownOnBackgroundThread()); + MOZ_ASSERT(MayProceed()); + +- const LSRequestCommonParams& commonParams = +- mForPreload +- ? mParams.get_LSRequestPreloadDatastoreParams().commonParams() +- : mParams.get_LSRequestPrepareDatastoreParams().commonParams(); +- + const PrincipalInfo& storagePrincipalInfo = +- commonParams.storagePrincipalInfo(); ++ mForPreload ++ ? mParams.get_LSRequestPreloadDatastoreParams().commonParams().storagePrincipalInfo() ++ : mParams.get_LSRequestPrepareDatastoreParams().commonParams().storagePrincipalInfo(); + + if (storagePrincipalInfo.type() == PrincipalInfo::TSystemPrincipalInfo) { + QuotaManager::GetInfoForChrome(&mSuffix, &mGroup, &mOrigin); +@@ -6996,10 +6993,9 @@ nsresult PrepareDatastoreOp::CheckExistingOperations() { + return NS_ERROR_FAILURE; + } + +- const LSRequestCommonParams& commonParams = +- mForPreload +- ? mParams.get_LSRequestPreloadDatastoreParams().commonParams() +- : mParams.get_LSRequestPrepareDatastoreParams().commonParams(); ++ const LSRequestCommonParams& preloadCommonParams = mParams.get_LSRequestPreloadDatastoreParams().commonParams(); ++ const LSRequestCommonParams& prepareCommonParams = mParams.get_LSRequestPrepareDatastoreParams().commonParams(); ++ const LSRequestCommonParams& commonParams = mForPreload ? preloadCommonParams : prepareCommonParams; + + const PrincipalInfo& storagePrincipalInfo = + commonParams.storagePrincipalInfo(); diff --git a/pkgs/applications/networking/browsers/qutebrowser/default.nix b/pkgs/applications/networking/browsers/qutebrowser/default.nix index 8f2f5a2cf7e..b616e82a209 100644 --- a/pkgs/applications/networking/browsers/qutebrowser/default.nix +++ b/pkgs/applications/networking/browsers/qutebrowser/default.nix @@ -21,12 +21,12 @@ let in mkDerivationWith python3Packages.buildPythonApplication rec { pname = "qutebrowser"; - version = "1.8.2"; + version = "1.8.3"; # the release tarballs are different from the git checkout! src = fetchurl { url = "https://github.com/qutebrowser/qutebrowser/releases/download/v${version}/${pname}-${version}.tar.gz"; - sha256 = "0walddppjb61k3dyq22cngkaw6alzn75k5npvnawla2l153irw5s"; + sha256 = "055zmzk3q0m3hx1742nfy2mdawfllrkvijnbzp1hiv01dj1bxaf8"; }; # Needs tox diff --git a/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix b/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix index 0494de83708..ff87e6b703d 100644 --- a/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix +++ b/pkgs/applications/networking/browsers/tor-browser-bundle-bin/default.nix @@ -93,19 +93,19 @@ let fteLibPath = makeLibraryPath [ stdenv.cc.cc gmp ]; # Upstream source - version = "9.0.1"; + version = "9.0.2"; lang = "en-US"; srcs = { x86_64-linux = fetchurl { url = "https://dist.torproject.org/torbrowser/${version}/tor-browser-linux64-${version}_${lang}.tar.xz"; - sha256 = "09iasj13wn3d1dygpxn4www4rx8wnxxlm9h6df9lzf4wll15px55"; + sha256 = "1xdnqphsj7wzwyv927jwd3fi36srx0minydwl5jg5yyd3m3if9hb"; }; i686-linux = fetchurl { url = "https://dist.torproject.org/torbrowser/${version}/tor-browser-linux32-${version}_${lang}.tar.xz"; - sha256 = "1vz3pvqi114c9lkyhqy754ngi90708c187xwiyr9786ff89sjw5i"; + sha256 = "1qk9fg5dvyyvbngsqla00by8a974mpvq9pnm2djif54lr2nfivwf"; }; }; in @@ -397,7 +397,7 @@ stdenv.mkDerivation rec { longDescription = tor-browser-bundle.meta.longDescription; homepage = "https://www.torproject.org/"; platforms = attrNames srcs; - maintainers = with maintainers; [ offline matejc doublec thoughtpolice joachifm hax404 ]; + maintainers = with maintainers; [ offline matejc doublec thoughtpolice joachifm hax404 cap ]; hydraPlatforms = []; # MPL2.0+, GPL+, &c. While it's not entirely clear whether # the compound is "libre" in a strict sense (some components place certain diff --git a/pkgs/applications/networking/browsers/uzbl/default.nix b/pkgs/applications/networking/browsers/uzbl/default.nix deleted file mode 100644 index f86c4a84e58..00000000000 --- a/pkgs/applications/networking/browsers/uzbl/default.nix +++ /dev/null @@ -1,45 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, python3, makeWrapper -, webkitgtk, glib-networking, gsettings-desktop-schemas, python2Packages -}: -# This package needs python3 during buildtime, -# but Python 2 + packages during runtime. - -stdenv.mkDerivation rec { - pname = "uzbl"; - version = "0.9.0"; - - meta = with stdenv.lib; { - description = "Tiny externally controllable webkit browser"; - homepage = "http://uzbl.org/"; - license = licenses.gpl3; - platforms = platforms.linux; - maintainers = with maintainers; [ raskin dgonyeo ]; - }; - - src = fetchurl { - name = "uzbl-v${version}.tar.gz"; - url = "https://github.com/uzbl/uzbl/archive/v${version}.tar.gz"; - sha256 = "0iskhv653fdm5raiidimh9fzlsw28zjqx7b5n3fl1wgbj6yz074k"; - }; - - preConfigure = '' - makeFlags="$makeFlags PREFIX=$out" - makeFlags="$makeFlags PYINSTALL_EXTRA=--prefix=$out" - mkdir -p $out/${python3.sitePackages}/ - export PYTHONPATH=$PYTHONPATH:$out/${python3.sitePackages} - ''; - - preFixup = '' - for f in $out/bin/*; do - wrapProgram $f \ - --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ - --prefix PYTHONPATH : "$PYTHONPATH" \ - --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH:$out/share" - done - ''; - - nativeBuildInputs = [ pkgconfig python3 makeWrapper ]; - - buildInputs = [ gsettings-desktop-schemas webkitgtk ]; - propagatedBuildInputs = with python2Packages; [ pygtk six ]; -} diff --git a/pkgs/applications/networking/browsers/vimprobable2/default.nix b/pkgs/applications/networking/browsers/vimprobable2/default.nix deleted file mode 100644 index 8a2e164b363..00000000000 --- a/pkgs/applications/networking/browsers/vimprobable2/default.nix +++ /dev/null @@ -1,43 +0,0 @@ -{ stdenv, fetchurl, makeWrapper, glib-networking, gtk2, libsoup, libX11, perl, - pkgconfig, webkitgtk, gsettings-desktop-schemas }: - -stdenv.mkDerivation rec { - version = "1.4.2"; - pname = "vimprobable2"; - src = fetchurl { - url = "mirror://sourceforge/vimprobable/vimprobable2_${version}.tar.bz2"; - sha256 = "13jdximksh9r3cgd2f8vms0pbsn3x0gxvyqdqiw16xp5fmdx5kzr"; - }; - - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ makeWrapper gtk2 libsoup libX11 perl webkitgtk gsettings-desktop-schemas ]; - - hardeningDisable = [ "format" ]; - - installFlags = "PREFIX=/ DESTDIR=$(out)"; - - preFixup = '' - wrapProgram "$out/bin/vimprobable2" \ - --prefix GIO_EXTRA_MODULES : "${glib-networking.out}/lib/gio/modules" \ - --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" - ''; - - meta = { - description = '' - Vimprobable is a web browser that behaves like the Vimperator plugin - available for Mozilla Firefox - ''; - longDescription = '' - Vimprobable is a web browser that behaves like the Vimperator plugin - available for Mozilla Firefox. It is based on the WebKit engine (using - GTK bindings). The goal of Vimprobable is to build a completely - keyboard-driven, efficient and pleasurable browsing-experience. Its - featureset might be considered "minimalistic", but not as minimalistic as - being completely featureless. - ''; - homepage = https://sourceforge.net/apps/trac/vimprobable; - license = stdenv.lib.licenses.mit; - maintainers = [ stdenv.lib.maintainers.aforemny ]; - platforms = with stdenv.lib.platforms; linux; - }; -} diff --git a/pkgs/applications/networking/browsers/webmacs/default.nix b/pkgs/applications/networking/browsers/webmacs/default.nix index 0f36177278b..b86ba3c39f0 100644 --- a/pkgs/applications/networking/browsers/webmacs/default.nix +++ b/pkgs/applications/networking/browsers/webmacs/default.nix @@ -27,18 +27,6 @@ mkDerivationWith python3Packages.buildPythonApplication rec { pygments ]; - dontWrapQtApps = true; - - makeWrapperArgs = [ "\${qtWrapperArgs[@]}" ]; - - # See https://github.com/parkouss/webmacs/blob/1a04fb7bd3f33d39cb4d71621b48c2458712ed39/setup.py#L32 - # Don't know why they're using CC for g++. - preConfigure = '' - export CC=$CXX - ''; - - doCheck = false; # test dependencies not packaged up yet - checkInputs = [ python3Packages.pytest #python3Packages.pytest-xvfb @@ -53,6 +41,20 @@ mkDerivationWith python3Packages.buildPythonApplication rec { # python3Packages.flake8 ]; + # See https://github.com/parkouss/webmacs/blob/1a04fb7bd3f33d39cb4d71621b48c2458712ed39/setup.py#L32 + # Don't know why they're using CC for g++. + preConfigure = '' + export CC=$CXX + ''; + + doCheck = false; # test dependencies not packaged up yet + + dontWrapQtApps = true; + + preFixup = '' + makeWrapperArgs+=("''${qtWrapperArgs[@]}") + ''; + meta = with lib; { description = "Keyboard-based web browser with Emacs/conkeror heritage"; longDescription = '' diff --git a/pkgs/applications/networking/cluster/argo/default.nix b/pkgs/applications/networking/cluster/argo/default.nix index 2c0d039721f..9295e90794d 100644 --- a/pkgs/applications/networking/cluster/argo/default.nix +++ b/pkgs/applications/networking/cluster/argo/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "argo"; - version = "2.4.1"; + version = "2.4.3"; src = fetchFromGitHub { owner = "argoproj"; repo = "argo"; rev = "v${version}"; - sha256 = "1f9l9d4r0qfhpr2fn17faczcwmwmdz8f56f27cmmnhxz4r7qcm48"; + sha256 = "15726n5rrbzszq5dpmrxbw9cn7ahihn28jqk274270140gz5aak1"; }; goDeps = ./deps.nix; diff --git a/pkgs/applications/networking/cluster/fluxctl/default.nix b/pkgs/applications/networking/cluster/fluxctl/default.nix index abd1abdc89a..904eabfcda8 100644 --- a/pkgs/applications/networking/cluster/fluxctl/default.nix +++ b/pkgs/applications/networking/cluster/fluxctl/default.nix @@ -2,23 +2,23 @@ buildGoModule rec { pname = "fluxctl"; - version = "1.15.0"; + version = "1.16.0"; src = fetchFromGitHub { owner = "weaveworks"; repo = "flux"; rev = version; - sha256 = "1aqcamhiivy733l2avc18b0k72sg0d8iqbsqvnj1344kqx6jgxf6"; + sha256 = "1yk78w9cwssk5y69iapfzqf7mnrkam3w64x4zsx3zjpdmvp9dq7l"; }; - modSha256 = "1dz1cb2513drb2lr5gbl7w05ksrq5rvkqdcjnlkdc00mypjb2ms5"; + modSha256 = "17rh8yilxqv0dwljwm5ay43diwcy5pa1g2jff9wyhsh8q7sy9wln"; subPackages = [ "cmd/fluxctl" ]; meta = with stdenv.lib; { description = "CLI client for Flux, the GitOps Kubernetes operator"; - homepage = https://github.com/fluxcd/flux; + homepage = "https://github.com/fluxcd/flux"; license = licenses.asl20; - maintainers = with maintainers; [ Gonzih ]; + maintainers = with maintainers; [ Gonzih filalex77 ]; }; } diff --git a/pkgs/applications/networking/cluster/helm/default.nix b/pkgs/applications/networking/cluster/helm/default.nix index 87500ababa2..45b6e9dcf33 100644 --- a/pkgs/applications/networking/cluster/helm/default.nix +++ b/pkgs/applications/networking/cluster/helm/default.nix @@ -1,14 +1,14 @@ -{ stdenv, buildGoModule, fetchFromGitHub }: +{ stdenv, buildGoModule, fetchFromGitHub, installShellFiles }: buildGoModule rec { pname = "helm"; - version = "3.0.0"; + version = "3.0.1"; src = fetchFromGitHub { owner = "helm"; repo = "helm"; rev = "v${version}"; - sha256 = "0gx5gmj1470q3gj8v043dmm31skf83p1ckzdcfzx8wdjlglsljrj"; + sha256 = "0l5rmmrb6b57w1szwp6g7ad3xv0pgvc394mzjr4bi3bzcjsn7wny"; }; modSha256 = "0xjzzwmq3i77anb7w2qfnz7vc0gxq02lylj0xs6dzwl543winshm"; @@ -16,6 +16,13 @@ buildGoModule rec { subPackages = [ "cmd/helm" ]; buildFlagsArray = [ "-ldflags=-w -s -X helm.sh/helm/v3/internal/version.gitCommit=v${version}" ]; + nativeBuildInputs = [ installShellFiles ]; + postInstall = '' + $out/bin/helm completion bash > helm.bash + $out/bin/helm completion zsh > helm.zsh + installShellCompletion helm.{bash,zsh} + ''; + meta = with stdenv.lib; { homepage = https://github.com/kubernetes/helm; description = "A package manager for kubernetes"; diff --git a/pkgs/applications/networking/cluster/k9s/default.nix b/pkgs/applications/networking/cluster/k9s/default.nix index 73d82207daf..6fbad55f807 100644 --- a/pkgs/applications/networking/cluster/k9s/default.nix +++ b/pkgs/applications/networking/cluster/k9s/default.nix @@ -2,16 +2,25 @@ buildGoModule rec { pname = "k9s"; - version = "0.8.4"; + version = "0.9.3"; + # rev is the release commit, mainly for version command output + rev = "1a9a83b34cdd0c9b4e793ed6b4b5c16ea1a949a0"; src = fetchFromGitHub { owner = "derailed"; repo = "k9s"; rev = version; - sha256 = "0wsj6wc2qi5708cg47l2qblq1cg8fcwxdygpkayib9hapx6lc6f8"; + sha256 = "0k27mfccz563r18zlbaxll305vrmrx19ym6znsikvqxlmhy86g36"; }; - modSha256 = "1ia9wx6yd9mdr981lcw58xv39iqzz25r03bmn1c6byxmq2xpcjq8"; + buildFlagsArray = '' + -ldflags= + -s -w + -X github.com/derailed/k9s/cmd.version=${version} + -X github.com/derailed/k9s/cmd.commit=${rev} + ''; + + modSha256 = "09rwbl8zd06ax5hidm5l1schwqvsr5ndlqh09w1rq9fqjijy649y"; meta = with stdenv.lib; { description = "Kubernetes CLI To Manage Your Clusters In Style."; diff --git a/pkgs/applications/networking/cluster/kubeseal/default.nix b/pkgs/applications/networking/cluster/kubeseal/default.nix index e232670c31f..3a2463447a2 100644 --- a/pkgs/applications/networking/cluster/kubeseal/default.nix +++ b/pkgs/applications/networking/cluster/kubeseal/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "kubeseal"; - version = "0.9.5"; + version = "0.9.6"; src = fetchFromGitHub { owner = "bitnami-labs"; repo = "sealed-secrets"; rev = "v${version}"; - sha256 = "0k59n40rmxjdn0xi8gr08zlxk0irfc7crra9x8qdljvivqshma3z"; + sha256 = "09ds5qn13l6l8kl2i01hgy6pqr30z1rm447ax32lf79zp8hca3r3"; }; modSha256 = "04dmjyz3vi2l0dfpyy42lkp2fv1vlfkvblrxh1dvb37phrkd5lbd"; diff --git a/pkgs/applications/networking/cluster/nomad/default.nix b/pkgs/applications/networking/cluster/nomad/default.nix index e6058643789..6afbbf215a3 100644 --- a/pkgs/applications/networking/cluster/nomad/default.nix +++ b/pkgs/applications/networking/cluster/nomad/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "nomad"; - version = "0.10.0"; + version = "0.10.2"; rev = "v${version}"; goPackagePath = "github.com/hashicorp/nomad"; @@ -12,7 +12,7 @@ buildGoPackage rec { owner = "hashicorp"; repo = pname; inherit rev; - sha256 = "1hvnrbna4hsyp5byx5si2gn4h3m6shwmd8nk0vpbrs3ck3dl1p6l"; + sha256 = "1kv67rkqnxiz2dkmc1v1df6qx9j5j4h7cis00v2i15sl824g22jw"; }; # ui: diff --git a/pkgs/applications/networking/cluster/terraform/default.nix b/pkgs/applications/networking/cluster/terraform/default.nix index 1bffafac882..e7551c17ff9 100644 --- a/pkgs/applications/networking/cluster/terraform/default.nix +++ b/pkgs/applications/networking/cluster/terraform/default.nix @@ -112,8 +112,8 @@ in rec { terraform_0_11-full = terraform_0_11.full; terraform_0_12 = pluggable (generic { - version = "0.12.17"; - sha256 = "1pmvjbmzws5qjzz34dw0fcb6p36vafqs0h8i87g7lmhckb9bqihv"; + version = "0.12.18"; + sha256 = "1p2rvs9dw2rzzggf3q2lifwbd82b7xb3jpb4yz5nmggn5g22qlc1"; patches = [ ./provider-path.patch ]; passthru = { inherit plugins; }; }); diff --git a/pkgs/applications/networking/dsvpn/default.nix b/pkgs/applications/networking/dsvpn/default.nix index 4958d290529..04d3887bf4e 100644 --- a/pkgs/applications/networking/dsvpn/default.nix +++ b/pkgs/applications/networking/dsvpn/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "dsvpn"; - version = "0.1.3"; + version = "0.1.4"; src = fetchFromGitHub { owner = "jedisct1"; repo = pname; rev = version; - sha256 = "1jl9b23s2glims09mb1sq01kaf10bfjsd3qsgk68mp5kvy9f3gj2"; + sha256 = "1gbj3slwmq990qxsbsaxasi98alnnzv3adp6f8w8sxd4gi6qxhdh"; }; installPhase = '' diff --git a/pkgs/applications/networking/errbot/default.nix b/pkgs/applications/networking/errbot/default.nix index 5b1ab692abd..402017e129d 100644 --- a/pkgs/applications/networking/errbot/default.nix +++ b/pkgs/applications/networking/errbot/default.nix @@ -1,37 +1,49 @@ -{ stdenv, fetchurl, pythonPackages, glibcLocales }: +{ lib, fetchFromGitHub, python, glibcLocales }: + +let + # errbot requires markdown<3, and is not compatible with it either. + py = python.override { + packageOverrides = self: super: { + markdown = super.markdown.overridePythonAttrs (oldAttrs: rec { + version = "2.6.11"; + src = super.fetchPypi { + pname = "Markdown"; + inherit version; + sha256 = "108g80ryzykh8bj0i7jfp71510wrcixdi771lf2asyghgyf8cmm8"; + }; + }); + }; + }; -pythonPackages.buildPythonApplication rec { +in +py.pkgs.buildPythonApplication rec { pname = "errbot"; - version = "5.2.0"; + version = "6.1.1"; - src = fetchurl { - url = "mirror://pypi/e/errbot/${pname}-${version}.tar.gz"; - sha256 = "0q5fg113s3gnym38d4y5mlnxw6vrm388zw5mlapf7b2zgx34r053"; + src = fetchFromGitHub { + owner = "errbotio"; + repo = "errbot"; + rev = version; + sha256 = "1s4dl1za5imwsv6j3y7m47dy91hmqd5n221kkqm9ni4mpzgpffz0"; }; - disabled = !pythonPackages.isPy3k; - LC_ALL = "en_US.utf8"; - postPatch = '' - substituteInPlace setup.py \ - --replace dnspython3 dnspython \ - --replace 'cryptography<2.1.0' cryptography \ - --replace 'pyOpenSSL<17.3.0' pyOpenSSL - ''; - - # tests folder is not included in release - doCheck = false; - buildInputs = [ glibcLocales ]; - propagatedBuildInputs = with pythonPackages; [ - webtest bottle threadpool rocket-errbot requests jinja2 - pyopenssl colorlog Yapsy markdown ansi pygments dnspython pep8 + propagatedBuildInputs = with py.pkgs; [ + webtest requests jinja2 flask dulwich + pyopenssl colorlog markdown ansi pygments daemonize pygments-markdown-lexer telegram irc slackclient - sleekxmpp hypchat pytest + sleekxmpp pyasn1 pyasn1-modules hypchat ]; - meta = with stdenv.lib; { + checkInputs = with py.pkgs; [ mock pytest ]; + # avoid tests that do network calls + checkPhase = '' + pytest tests -k 'not backup and not broken_plugin and not plugin_cycle' + ''; + + meta = with lib; { description = "Chatbot designed to be simple to extend with plugins written in Python"; homepage = http://errbot.io/; maintainers = with maintainers; [ fpletz globin ]; diff --git a/pkgs/applications/networking/flent/default.nix b/pkgs/applications/networking/flent/default.nix index bbd9a7601ac..19f813e5c75 100644 --- a/pkgs/applications/networking/flent/default.nix +++ b/pkgs/applications/networking/flent/default.nix @@ -3,10 +3,10 @@ buildPythonApplication rec { pname = "flent"; - version = "1.3.0"; + version = "1.3.2"; src = fetchPypi { inherit pname version; - sha256 = "099779i0ghjd9ikq77z6m6scnlmk946lw9issrgz8zm7babiw4d7"; + sha256 = "1k265xxxjld6q38m9lsgy7p0j70qp9a49vh9zg0njbi4i21lxq23"; }; buildInputs = [ sphinx ]; diff --git a/pkgs/applications/networking/ftp/filezilla/default.nix b/pkgs/applications/networking/ftp/filezilla/default.nix index f12fdefc781..f1b809009ad 100644 --- a/pkgs/applications/networking/ftp/filezilla/default.nix +++ b/pkgs/applications/networking/ftp/filezilla/default.nix @@ -18,11 +18,11 @@ stdenv.mkDerivation rec { pname = "filezilla"; - version = "3.45.1"; + version = "3.46.0"; src = fetchurl { url = "https://download.filezilla-project.org/client/FileZilla_${version}_src.tar.bz2"; - sha256 = "1hhyknmbvkyq50m7lp41n7g0818frpig8xmxliy501bz4jkhi748"; + sha256 = "0v7656p7b6w88a96wj8058b13yxbwi186l092i9whrisngnv2pnf"; }; configureFlags = [ diff --git a/pkgs/applications/networking/gmailieer/default.nix b/pkgs/applications/networking/gmailieer/default.nix index e37dc9e7cac..a20728e2199 100644 --- a/pkgs/applications/networking/gmailieer/default.nix +++ b/pkgs/applications/networking/gmailieer/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { name = "gmailieer-${version}"; - version = "0.11"; + version = "1.0"; src = fetchFromGitHub { owner = "gauteh"; repo = "gmailieer"; rev = "v${version}"; - sha256 = "0gjmb8s3d7nj9jp5zkz5q6a59777ay6b1sg4ghl8iw9m8l4h42xa"; + sha256 = "1zzylv8xbcrh34bz0s29dawzcyx39lai8y8wk0bl4x75v1jfynvf"; }; propagatedBuildInputs = with python3Packages; [ diff --git a/pkgs/applications/networking/gopher/gopher/default.nix b/pkgs/applications/networking/gopher/gopher/default.nix index 4fcdf55777a..f90e35ca7e2 100644 --- a/pkgs/applications/networking/gopher/gopher/default.nix +++ b/pkgs/applications/networking/gopher/gopher/default.nix @@ -1,23 +1,25 @@ -{stdenv, fetchurl, ncurses}: +{ stdenv, fetchFromGitHub, ncurses }: stdenv.mkDerivation rec { pname = "gopher"; - version = "3.0.11"; + version = "3.0.17"; - src = fetchurl { - url = "http://gopher.quux.org:70/devel/gopher/Downloads/gopher_${version}.tar.gz"; - sha256 = "15r7x518wlpfqpd6z0hbdwm8rw8ll8hbpskdqgxxhrmy00aa7w9c"; + src = fetchFromGitHub { + owner = "jgoerzen"; + repo = pname; + rev = "release/${version}"; + sha256 = "1j6xh5l8v231d4mwl9gj1c34dc0jmazz6zg1qqfxmqr9y609jq3h"; }; buildInputs = [ ncurses ]; preConfigure = "export LIBS=-lncurses"; - meta = { + meta = with stdenv.lib; { homepage = http://gopher.quux.org:70/devel/gopher; description = "A ncurses gopher client"; - platforms = stdenv.lib.platforms.unix; - license = stdenv.lib.licenses.gpl2; - maintainers = with stdenv.lib.maintainers; [ sternenseemann ]; + platforms = platforms.linux; # clang doesn't like local regex.h + license = licenses.gpl2; + maintainers = with maintainers; [ sternenseemann ]; }; } diff --git a/pkgs/applications/networking/hydroxide/default.nix b/pkgs/applications/networking/hydroxide/default.nix new file mode 100644 index 00000000000..75c1cdaece9 --- /dev/null +++ b/pkgs/applications/networking/hydroxide/default.nix @@ -0,0 +1,33 @@ +{ lib, buildGoModule, fetchFromGitHub, fetchpatch }: + +buildGoModule rec { + pname = "hydroxide"; + version = "0.2.11"; + + src = fetchFromGitHub { + owner = "emersion"; + repo = pname; + rev = "v${version}"; + sha256 = "0rn35iyli80kgj3yn93lrx0ybgc8fhvmkvx1d18ill7r4cmavand"; + }; + + modSha256 = "0b19rcif8yiyvhrsjd3q5nsvr580lklamlphx4dk47n456ckcqfp"; + + # FIXME: remove with next release + patches = [ + (fetchpatch { + url = "https://github.com/emersion/hydroxide/commit/80e0fa6f3e0154338fb0af8a82ca32ae6281dd15.patch"; + sha256 = "1xi0clzgz14a7sxnwr0li7sz9p05sfh3zh5iqg2qz5f415k9jknj"; + }) + ]; + + subPackages = [ "cmd/hydroxide" ]; + + meta = with lib; { + description = "A third-party, open-source ProtonMail bridge"; + homepage = "https://github.com/emersion/hydroxide"; + license = licenses.mit; + maintainers = with maintainers; [ filalex77 ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/applications/networking/ids/zeek/default.nix b/pkgs/applications/networking/ids/zeek/default.nix index b087a6c3ae3..947abc39c21 100644 --- a/pkgs/applications/networking/ids/zeek/default.nix +++ b/pkgs/applications/networking/ids/zeek/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { pname = "zeek"; - version = "3.0.0"; + version = "3.0.1"; src = fetchurl { url = "https://www.zeek.org/downloads/zeek-${version}.tar.gz"; - sha256 = "16pz5fh0z1hmvhn8pxqmdm5a9d8mqrp4gxpxkaywnaqk2h598lmm"; + sha256 = "1lhik212wrbi092qizc08f3i0b9pj318sxwm0abc5jc3v3pz7x3r"; }; nativeBuildInputs = [ cmake flex bison file ]; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index f905f90aebd..a3497df1716 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -3,11 +3,11 @@ , gsm, speex, portaudio, spandsp, libuuid, ccache, libvpx }: stdenv.mkDerivation rec { - version = "0.6.4"; + version = "0.6.5"; pname = "baresip"; src=fetchurl { url = "http://www.creytiv.com/pub/baresip-${version}.tar.gz"; - sha256 = "10bmb7wiqzjdp51kjahmsp7gkvnqp91mfz0nmwgsw1n4pv8hnwb1"; + sha256 = "13di0ycdcr2q2a20mjvyaqfmvk5xldwqaxklqsz7470jnbc5n0rb"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [zlib openssl libre librem cairo mpg123 diff --git a/pkgs/applications/networking/instant-messengers/blink/default.nix b/pkgs/applications/networking/instant-messengers/blink/default.nix index 62d0d738b50..b6e13fe403d 100644 --- a/pkgs/applications/networking/instant-messengers/blink/default.nix +++ b/pkgs/applications/networking/instant-messengers/blink/default.nix @@ -44,11 +44,6 @@ mkDerivationWith pythonPackages.buildPythonApplication rec { dontWrapQtApps = true; - makeWrapperArgs = [ - "\${qtWrapperArgs[@]}" - "--prefix LD_LIBRARY_PATH: ${gnutls.out}/lib" - ]; - postInstall = '' mkdir -p "$out/share/applications" mkdir -p "$out/share/pixmaps" @@ -56,6 +51,13 @@ mkDerivationWith pythonPackages.buildPythonApplication rec { cp "$out"/share/blink/icons/blink.* "$out/share/pixmaps" ''; + preFixup = '' + makeWrapperArgs+=( + --prefix "LD_LIBRARY_PATH" ":" "${gnutls.out}/lib" + "''${qtWrapperArgs[@]}" + ) + ''; + meta = with stdenv.lib; { homepage = http://icanblink.com/; description = "A state of the art, easy to use SIP client for Voice, Video and IM"; diff --git a/pkgs/applications/networking/instant-messengers/fractal/default.nix b/pkgs/applications/networking/instant-messengers/fractal/default.nix index 478d27fcfb3..052a626531b 100644 --- a/pkgs/applications/networking/instant-messengers/fractal/default.nix +++ b/pkgs/applications/networking/instant-messengers/fractal/default.nix @@ -9,7 +9,7 @@ , python3 , rustPlatform , pkgconfig -, gtksourceview +, gtksourceview4 , glib , libhandy , gtk3 @@ -25,17 +25,17 @@ rustPlatform.buildRustPackage rec { pname = "fractal"; - version = "4.2.0"; + version = "4.2.2"; src = fetchFromGitLab { domain = "gitlab.gnome.org"; owner = "GNOME"; repo = "fractal"; rev = version; - sha256 = "0clwsmd6h759bzlazfq5ig56dbx7npx3h43yspk87j1rm2dp1177"; + sha256 = "0r98km3c8naj3mdr1wppzj823ir7jnsia7r3cbg3vsq8q52i480r"; }; - cargoSha256 = "1hwjajkphl5439dymglgj3h92hxgbf7xpipzrga7ga8m10nx1dhl"; + cargoSha256 = "1n9n4d057cz44sh1iy2hb2adplhnrhvr8drnp0v2h8yw73a5shvv"; nativeBuildInputs = [ cargo @@ -58,21 +58,14 @@ rustPlatform.buildRustPackage rec { gst_all_1.gst-plugins-bad gst_all_1.gst-plugins-base gst_all_1.gstreamer + gst_all_1.gst-validate gtk3 - gtksourceview + gtksourceview4 libhandy openssl sqlite ]; - cargoPatches = [ - # https://gitlab.gnome.org/GNOME/fractal/merge_requests/446 - (fetchpatch { - url = "https://gitlab.gnome.org/GNOME/fractal/commit/2778acdc6c50bc6f034513029b66b0b092bc4c38.patch"; - sha256 = "08v17xmbwrjw688ps4hsnd60d5fm26xj72an3zf6yszha2b97j6y"; - }) - ]; - postPatch = '' chmod +x scripts/test.sh patchShebangs scripts/meson_post_install.py scripts/test.sh diff --git a/pkgs/applications/networking/instant-messengers/franz/default.nix b/pkgs/applications/networking/instant-messengers/franz/default.nix index 46a27737d23..605550beb50 100644 --- a/pkgs/applications/networking/instant-messengers/franz/default.nix +++ b/pkgs/applications/networking/instant-messengers/franz/default.nix @@ -3,13 +3,13 @@ , gnome2, dbus, nss, nspr, alsaLib, cups, expat, udev, libnotify, xdg_utils }: let - version = "5.3.3"; + version = "5.4.1"; in stdenv.mkDerivation { pname = "franz"; inherit version; src = fetchurl { url = "https://github.com/meetfranz/franz/releases/download/v${version}/franz_${version}_amd64.deb"; - sha256 = "03ii1gpc2wijy917565pqig1ihd4zhal12i2f5k916i7fp8912m1"; + sha256 = "1g1z5zjm9l081hpqslfc4h7pqh4k76ccmlz71r21204wy630mw6h"; }; # don't remove runtime deps @@ -35,7 +35,7 @@ in stdenv.mkDerivation { # provide desktop item and icon cp -r usr/share $out substituteInPlace $out/share/applications/franz.desktop \ - --replace Exec=\"/opt/Franz/franz\" Exec=franz + --replace /opt/Franz/franz franz ''; dontWrapGApps = true; @@ -50,7 +50,7 @@ in stdenv.mkDerivation { description = "A free messaging app that combines chat & messaging services into one application"; homepage = https://meetfranz.com; license = licenses.free; - maintainers = [ maintainers.gnidorah ]; + maintainers = [ maintainers.davidtwco ]; platforms = ["x86_64-linux"]; hydraPlatforms = []; }; diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json index 3338f6159d9..c49934b96f7 100644 --- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json +++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json @@ -2,7 +2,7 @@ "name": "riot-web", "productName": "Riot", "main": "src/electron-main.js", - "version": "1.5.5", + "version": "1.5.6", "description": "A feature-rich client for Matrix.org", "author": "New Vector Ltd.", "dependencies": { diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix index c3fe4b9dd33..9b6f591bd42 100644 --- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix +++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix @@ -6,12 +6,12 @@ let executableName = "riot-desktop"; - version = "1.5.5"; + version = "1.5.6"; riot-web-src = fetchFromGitHub { owner = "vector-im"; repo = "riot-web"; rev = "v${version}"; - sha256 = "18xhqniwxp1sv49qcd9ah8nyy2n2yliy3wg613raxjl16qvvzxmc"; + sha256 = "148rg6wc84xy53bj16v5riw78s999ridid59x6v9jas827l0bdpk"; }; in mkYarnPackage rec { diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix index 93c3d837b05..ada903701e2 100644 --- a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix +++ b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "riot-web"; - version = "1.5.5"; + version = "1.5.6"; src = fetchurl { url = "https://github.com/vector-im/riot-web/releases/download/v${version}/riot-v${version}.tar.gz"; - sha256 = "0isln25sl5jvvlqvh822w73a4i82x75g1ywf3p9n5m1a5sr9f537"; + sha256 = "063ynbil038y201skyldj2ysr0hwgwq981w1iw104xd17x31zmn0"; }; installPhase = let @@ -17,9 +17,13 @@ stdenv.mkDerivation rec { then writeText "riot-config.json" conf else "$out/config.sample.json"; in '' + runHook preInstall + mkdir -p $out/ cp -R . $out/ ln -s ${configFile} $out/config.json + + runHook postInstall ''; meta = { diff --git a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix index aee540b7886..191e5d05d80 100644 --- a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix @@ -59,7 +59,7 @@ let in stdenv.mkDerivation rec { pname = "signal-desktop"; - version = "1.28.0"; # Please backport all updates to the stable channel. + version = "1.29.2"; # Please backport all updates to the stable channel. # All releases have a limited lifetime and "expire" 90 days after the release. # When releases "expire" the application becomes unusable until an update is # applied. The expiration date for the current release can be extracted with: @@ -69,7 +69,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "https://updates.signal.org/desktop/apt/pool/main/s/signal-desktop/signal-desktop_${version}_amd64.deb"; - sha256 = "14cd635fax99l5jk70jy0mjnvw01b0gbv666szc4ajamm36l2bkr"; + sha256 = "1w35x0p3znylgr0vx72x3kdm3cyg0xymqy12q8bygvijd0h6182d"; }; phases = [ "unpackPhase" "installPhase" ]; diff --git a/pkgs/applications/networking/instant-messengers/slack/default.nix b/pkgs/applications/networking/instant-messengers/slack/default.nix index a16023f307d..e501d3bcdbf 100644 --- a/pkgs/applications/networking/instant-messengers/slack/default.nix +++ b/pkgs/applications/networking/instant-messengers/slack/default.nix @@ -1,12 +1,12 @@ { theme ? null, stdenv, fetchurl, dpkg, makeWrapper , alsaLib, atk, cairo, cups, curl, dbus, expat, fontconfig, freetype, glib , gnome2, gtk3, gdk-pixbuf, libappindicator-gtk3, libnotify, libxcb, nspr, nss, pango , systemd, xorg, -at-spi2-atk, at-spi2-core, libuuid, nodePackages, libpulseaudio +at-spi2-atk, at-spi2-core, libuuid, nodePackages, libpulseaudio, xdg_utils }: let - version = "4.1.2"; + version = "4.2.0"; rpath = stdenv.lib.makeLibraryPath [ alsaLib @@ -53,7 +53,7 @@ let if stdenv.hostPlatform.system == "x86_64-linux" then fetchurl { url = "https://downloads.slack-edge.com/linux_releases/slack-desktop-${version}-amd64.deb"; - sha256 = "0a1b2k81hm1lfrdb47gmd07jqb7hva9sxsiph7b3iwzpzw8pjrkh"; + sha256 = "01b2klhky04fijdqcpfafgdqx2c5nh2fpnzvzgvz10hv7h16cinv"; } else throw "Slack is not supported on ${stdenv.hostPlatform.system}"; @@ -93,7 +93,8 @@ in stdenv.mkDerivation { # Replace the broken bin/slack symlink with a startup wrapper rm $out/bin/slack makeWrapper $out/lib/slack/slack $out/bin/slack \ - --prefix XDG_DATA_DIRS : $GSETTINGS_SCHEMAS_PATH + --prefix XDG_DATA_DIRS : $GSETTINGS_SCHEMAS_PATH \ + --prefix PATH : ${xdg_utils}/bin # Fix the desktop link substituteInPlace $out/share/applications/slack.desktop \ diff --git a/pkgs/applications/networking/instant-messengers/teams/default.nix b/pkgs/applications/networking/instant-messengers/teams/default.nix new file mode 100644 index 00000000000..0921dcfccdd --- /dev/null +++ b/pkgs/applications/networking/instant-messengers/teams/default.nix @@ -0,0 +1,63 @@ +{ lib +, stdenv +, fetchurl +, autoPatchelfHook +, wrapGAppsHook +, dpkg +, atomEnv +, libuuid +, pulseaudio +, at-spi2-atk +, coreutils +, gawk +, xdg_utils +, systemd }: + +stdenv.mkDerivation rec { + pname = "teams"; + version = "1.2.00.32451"; + + src = fetchurl { + url = "https://packages.microsoft.com/repos/ms-teams/pool/main/t/teams/teams_${version}_amd64.deb"; + sha256 = "1p053kg5qksr78v2h7cxia5mb9kzgfwm6n99x579vfx48kka1n18"; + }; + + nativeBuildInputs = [ dpkg autoPatchelfHook wrapGAppsHook ]; + + unpackCmd = "dpkg -x $curSrc ."; + + buildInputs = atomEnv.packages ++ [ + libuuid + at-spi2-atk + ]; + + runtimeDependencies = [ + systemd.lib + pulseaudio + ]; + + preFixup = '' + gappsWrapperArgs+=(--prefix PATH : "${coreutils}/bin:${gawk}/bin:${xdg_utils}/bin") + ''; + + installPhase = '' + mkdir -p $out/{opt,bin} + + mv share/teams $out/opt/ + mv share $out/share + + substituteInPlace $out/share/applications/teams.desktop \ + --replace /usr/bin/ $out/bin/ + + ln -s $out/opt/teams/teams $out/bin/ + ''; + + meta = with stdenv.lib; { + description = "Microsoft Teams"; + homepage = "https://teams.microsoft.com"; + downloadPage = "https://teams.microsoft.com/downloads"; + license = licenses.unfree; + maintainers = [ maintainers.liff ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/pkgs/applications/networking/instant-messengers/teamspeak/server.nix b/pkgs/applications/networking/instant-messengers/teamspeak/server.nix index 15cec96afc7..9c57ac829af 100644 --- a/pkgs/applications/networking/instant-messengers/teamspeak/server.nix +++ b/pkgs/applications/networking/instant-messengers/teamspeak/server.nix @@ -4,13 +4,13 @@ let arch = if stdenv.is64bit then "amd64" else "x86"; in stdenv.mkDerivation rec { pname = "teamspeak-server"; - version = "3.9.1"; + version = "3.10.2"; src = fetchurl { url = "https://files.teamspeak-services.com/releases/server/${version}/teamspeak3-server_linux_${arch}-${version}.tar.bz2"; sha256 = if stdenv.is64bit - then "0vzi0prnqhjxrwlghwgii0rsmml6aa3qk3yv227g9wz5m3b9f10a" - else "1nn0fh4s5rmnn27djbsk21jaah1kxyvap9qaf5p4r7cydwr1bzm6"; + then "03c717qjlbym02nwy82l6jhrkbidsdm1jv5k8p3c10p6a46jy9nl" + else "1ay0lmbv2rw9klz289yg0hhsac83kfzzlbwwhjpi28xndl2lq4bf"; }; buildInputs = [ stdenv.cc.cc ]; @@ -28,12 +28,12 @@ in stdenv.mkDerivation rec { ln -s $out/lib/teamspeak/tsdns/tsdnsserver $out/bin/tsdnsserver ''; - meta = { + meta = with stdenv.lib; { description = "TeamSpeak voice communication server"; homepage = https://teamspeak.com/; - license = stdenv.lib.licenses.unfreeRedistributable; - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.arobyn ]; + license = licenses.unfreeRedistributable; + platforms = platforms.linux; + maintainers = with maintainers; [ arobyn gerschtli ]; }; } diff --git a/pkgs/applications/networking/instant-messengers/twinkle/default.nix b/pkgs/applications/networking/instant-messengers/twinkle/default.nix new file mode 100644 index 00000000000..0378f50a9c0 --- /dev/null +++ b/pkgs/applications/networking/instant-messengers/twinkle/default.nix @@ -0,0 +1,78 @@ +{ stdenv +, fetchFromGitHub +, cmake +, libxml2 +, libsndfile +, file +, readline +, bison +, flex +, ucommon +, ccrtp +, qtbase +, qttools +, qtquickcontrols2 +, alsaLib +, speex +, ilbc +, fetchurl +, mkDerivation +, bcg729 +}: + +mkDerivation rec { + pname = "twinkle"; + version = "1.10.2"; + + src = fetchFromGitHub { + repo = pname; + owner = "LubosD"; + rev = "v${version}"; + sha256 = "0s0gi03xwvzp02ah4q6j33r9jx9nbayr6dxlg2ck9pwbay1nq1hx"; + }; + + buildInputs = [ + libxml2 + file # libmagic + libsndfile + readline + ucommon + ccrtp + qtbase + qttools + qtquickcontrols2 + alsaLib + speex + ilbc + ]; + + patches = [ + (fetchurl { # https://github.com/LubosD/twinkle/pull/152 patch for bcg729 1.0.2+ + url = "https://github.com/LubosD/twinkle/compare/05082ae12051821b1d969e6672d9e4e5afe1bc07...7a6c533cda387652b5b4cb2a867be1a18585890c.patch"; + sha256 = "39fc6cef3e88cfca8db44612b2d082fb618027b0f99509138d3c0d2777a494c2"; + }) + ]; + + nativeBuildInputs = [ + cmake + bison + flex + bcg729 + ]; + + cmakeFlags = [ + "-DWITH_G729=On" + "-DWITH_SPEEX=On" + "-DWITH_ILBC=On" + /* "-DWITH_DIAMONDCARD=On" seems ancient and broken */ + ]; + + meta = with stdenv.lib; { + changelog = "https://github.com/LubosD/twinkle/blob/${version}/NEWS"; + description = "A SIP-based VoIP client"; + homepage = "http://twinkle.dolezel.info/"; + license = licenses.gpl2Plus; + maintainers = [ maintainers.mkg20001 ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix b/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix index 0079d9f324f..fde40c62e4d 100644 --- a/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix @@ -69,11 +69,14 @@ let desktopItem = makeDesktopItem { categories = "Network;InstantMessaging;Chat;VideoConference"; comment = "Secure messenger for everyone"; - desktopName = "Wire Desktop"; + desktopName = "Wire"; exec = "wire-desktop %U"; genericName = "Secure messenger"; icon = "wire-desktop"; name = "wire-desktop"; + extraEntries = '' + StartupWMClass="Wire" + ''; }; dontBuild = true; diff --git a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix index 431c9326aac..79151434297 100644 --- a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix +++ b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix @@ -14,11 +14,11 @@ assert pulseaudioSupport -> libpulseaudio != null; let inherit (stdenv.lib) concatStringsSep makeBinPath optional; - version = "3.5.330166.1202"; + version = "3.5.336627.1216"; srcs = { x86_64-linux = fetchurl { url = "https://zoom.us/client/${version}/zoom_x86_64.tar.xz"; - sha256 = "1fjirl4hmxvy4kp3b0n97mn8sz355ik10297qx6hcr0fhn2v0nig"; + sha256 = "04r45z2rjjn9gr7bxhfwg49xkyhmpcn5y6pdbkdnrfwzaqzisavz"; }; }; diff --git a/pkgs/applications/networking/irc/hexchat/default.nix b/pkgs/applications/networking/irc/hexchat/default.nix index f537627f976..7dd3792a3cb 100644 --- a/pkgs/applications/networking/irc/hexchat/default.nix +++ b/pkgs/applications/networking/irc/hexchat/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, fetchpatch, pkgconfig, gtk2, lua, perl, python3 , pciutils, dbus-glib, libcanberra-gtk2, libproxy -, libsexy, enchant2, libnotify, openssl, isocodes +, enchant2, libnotify, openssl, isocodes , desktop-file-utils , meson, ninja }: @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ gtk2 lua perl python3 pciutils dbus-glib libcanberra-gtk2 libproxy - libsexy libnotify openssl desktop-file-utils + libnotify openssl desktop-file-utils isocodes ]; diff --git a/pkgs/applications/networking/irc/weechat/default.nix b/pkgs/applications/networking/irc/weechat/default.nix index ec806c86ebd..1e03bb77ced 100644 --- a/pkgs/applications/networking/irc/weechat/default.nix +++ b/pkgs/applications/networking/irc/weechat/default.nix @@ -27,12 +27,12 @@ let in assert lib.all (p: p.enabled -> ! (builtins.elem null p.buildInputs)) plugins; stdenv.mkDerivation rec { - version = "2.6"; + version = "2.7"; pname = "weechat"; src = fetchurl { url = "https://weechat.org/files/src/weechat-${version}.tar.bz2"; - sha256 = "1narazk28m7lmn1vqi7bhyvnr8apjrmaa4w1hbadn64hwr8ya1hb"; + sha256 = "00hzchzw1w2181kczcrrnj8ngml3bwk7qciha3higxq3qynf0h8c"; }; outputs = [ "out" "man" ] ++ map (p: p.name) enabledPlugins; @@ -41,6 +41,8 @@ let cmakeFlags = with stdenv.lib; [ "-DENABLE_MAN=ON" "-DENABLE_DOC=ON" + "-DENABLE_JAVASCRIPT=OFF" # Requires v8 <= 3.24.3, https://github.com/weechat/weechat/issues/360 + "-DENABLE_PHP=OFF" ] ++ optionals stdenv.isDarwin ["-DICONV_LIBRARY=${libiconv}/lib/libiconv.dylib" "-DCMAKE_FIND_FRAMEWORK=LAST"] ++ map (p: "-D${p.cmakeFlag}=" + (if p.enabled then "ON" else "OFF")) plugins diff --git a/pkgs/applications/networking/mailreaders/claws-mail/default.nix b/pkgs/applications/networking/mailreaders/claws-mail/default.nix index 9fcf72ce4bc..e89a36eade0 100644 --- a/pkgs/applications/networking/mailreaders/claws-mail/default.nix +++ b/pkgs/applications/networking/mailreaders/claws-mail/default.nix @@ -1,7 +1,7 @@ { config, fetchurl, stdenv, wrapGAppsHook, autoreconfHook , curl, dbus, dbus-glib, enchant, gtk2, gnutls, gnupg, gpgme , libarchive, libcanberra-gtk2, libetpan, libnotify, libsoup, libxml2, networkmanager -, openldap, perl, pkgconfig, poppler, python, shared-mime-info, webkitgtk24x-gtk2 +, openldap, perl, pkgconfig, poppler, python, shared-mime-info , glib-networking, gsettings-desktop-schemas, libSM, libytnef, libical # Build options # TODO: A flag to build the manual. @@ -13,7 +13,6 @@ , enableNetworkManager ? config.networking.networkmanager.enable or false , enablePgp ? true , enablePluginArchive ? false -, enablePluginFancy ? false , enablePluginNotificationDialogs ? true , enablePluginNotificationSounds ? true , enablePluginPdf ? false @@ -64,12 +63,10 @@ stdenv.mkDerivation rec { ++ optional enablePluginArchive libarchive ++ optional enablePluginNotificationSounds libcanberra-gtk2 ++ optional enablePluginNotificationDialogs libnotify - ++ optional enablePluginFancy libsoup ++ optional enablePluginRssyl libxml2 ++ optional enableNetworkManager networkmanager ++ optional enableLdap openldap ++ optional enablePluginPdf poppler - ++ optional enablePluginFancy webkitgtk24x-gtk2 ++ optional enablePluginVcalendar libical; configureFlags = @@ -81,7 +78,6 @@ stdenv.mkDerivation rec { "--disable-pgpmime-plugin" ] ++ optional (!enablePluginArchive) "--disable-archive-plugin" - ++ optional (!enablePluginFancy) "--disable-fancy-plugin" ++ optional (!enablePluginPdf) "--disable-pdf_viewer-plugin" ++ optional (!enablePluginPython) "--disable-python-plugin" ++ optional (!enablePluginRavatar) "--disable-libravatar-plugin" diff --git a/pkgs/applications/networking/mailreaders/mutt/default.nix b/pkgs/applications/networking/mailreaders/mutt/default.nix index bc4bb49981e..f0b8fdcf8e2 100644 --- a/pkgs/applications/networking/mailreaders/mutt/default.nix +++ b/pkgs/applications/networking/mailreaders/mutt/default.nix @@ -27,11 +27,11 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "mutt"; - version = "1.13.0"; + version = "1.13.2"; src = fetchurl { url = "http://ftp.mutt.org/pub/mutt/${pname}-${version}.tar.gz"; - sha256 = "1dzmypmcyqsxcb0qwz1b2v3nhvd83jcqlnn3acvgaiag10hxq3d0"; + sha256 = "0x4yfvk8415p80h9an242n6q3b43mw6mnnczh95zd3j0zwdr6wrg"; }; patches = optional smimeSupport (fetchpatch { diff --git a/pkgs/applications/networking/mailreaders/neomutt/default.nix b/pkgs/applications/networking/mailreaders/neomutt/default.nix index 79110ac37b2..274d9d4718e 100644 --- a/pkgs/applications/networking/mailreaders/neomutt/default.nix +++ b/pkgs/applications/networking/mailreaders/neomutt/default.nix @@ -4,14 +4,14 @@ }: stdenv.mkDerivation rec { - version = "20191129"; + version = "20191207"; pname = "neomutt"; src = fetchFromGitHub { owner = "neomutt"; repo = "neomutt"; rev = version; - sha256 = "1zwnap307qzjkfcap0rxgwwmis77lhr7js4avig0qdqnmqbdlgbh"; + sha256 = "147yjpqnsbfy01fhsflxlixk0985r91a6bjmqq3cwmf7gka3sihm"; }; buildInputs = [ diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix index 3cc7203401b..a996841055b 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix @@ -1,615 +1,615 @@ { - version = "68.2.2"; 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+ sha512 = "6b85864179a075fc6382e7c61a4af86445fa23da04e9e0b55486e063305fe4c3abc99b8e91ba6a9b3496c1f88ca2c6a480cb3bdcfc3ef028104353d8227adb26"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.2.2/linux-i686/uz/thunderbird-68.2.2.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.3.0/linux-i686/uz/thunderbird-68.3.0.tar.bz2"; locale = "uz"; arch = "linux-i686"; - sha512 = "e59c19b61a03b9170fec7c12680f136bdda129c72a0901d653279e0c5c0a0d748f1434379b3901ffc7fccd0d4688cd8414171b0f94171cddbc7f249817689b8a"; + sha512 = "56af9488b21270ca46cfac5ebbe1434ecfcfa300baf1e5fe2ee26395440e506597d56b0a46fe76bc72a91b393070204740107a58857db2bac6551b2e3767adeb"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.2.2/linux-i686/vi/thunderbird-68.2.2.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.3.0/linux-i686/vi/thunderbird-68.3.0.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha512 = "9e65b74645b229c92df8844f356034504f185a4ee9a0a504fb8a4c9c253101eb855a9b5ba28e995221da85c6e58aac9f0e7368639202011307d1b2a623b85931"; + sha512 = "6bd5a70c222aa26a0c63b5ba3673d3d04b4879730aa1ae8bbddb98038a31caff2cff9e31ede98f22a7e7625c977fb8930e5fdc4db2c64cc80180254dce182021"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.2.2/linux-i686/zh-CN/thunderbird-68.2.2.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.3.0/linux-i686/zh-CN/thunderbird-68.3.0.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha512 = "2cf2d1a12c53e1bfe9f9cfd13449dbb62260fbf7a1548b3b2d76403a2597c286f727341c4bb4ed65b5086391a99a0fdf97a74c967a4ea9f99a0a393b9a87f7be"; + sha512 = "816022b722adbcfa5ac72ea69dde238a0f2c531877340bda6a0c6e39fa5433f6fea615e74d1c4420bbe6adfa739f90db1d2d3c409e537a1a6cef5dc1b4915cb3"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.2.2/linux-i686/zh-TW/thunderbird-68.2.2.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.3.0/linux-i686/zh-TW/thunderbird-68.3.0.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha512 = "389a4e08d3a8cef73017e26b5abb4cd21f8237486470fa382ad90f6d1276bb4ee9e35dc66422728de4e8eb35145d898a705e025d04eb406099a275c2afb05623"; + sha512 = "7b14d28c689a15a9c38dc6da2cf78ed46f48dafd1b0fcd009491feafbc3ddb93b08a710534035cea4b10df0090bd77d71aed7df0c626bd9c9063e06c02c2bf8a"; } ]; } diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix index 78ed553ccd8..b756c0de680 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix @@ -1,213 +1,339 @@ -{ lib, stdenv, fetchurl, pkgconfig, gtk2, pango, perl, python2, python3, nodejs -, libIDL, libjpeg, zlib, dbus, dbus-glib, bzip2, xorg -, freetype, fontconfig, file, nspr, nss, libnotify -, yasm, libGLU, libGL, sqlite, zip, unzip -, libevent, libstartup_notification -, icu, libpng, jemalloc -, autoconf213, which, m4, fetchpatch -, writeScript, xidel, common-updater-scripts, coreutils, gnused, gnugrep, curl +{ autoconf213 +, bzip2 +, cargo +, common-updater-scripts +, coreutils +, curl +, dbus +, dbus-glib +, fetchurl +, file +, fontconfig +, freetype +, glib +, gnugrep +, gnused +, icu +, jemalloc +, lib +, libGL +, libGLU +, libIDL +, libevent +, libjpeg +, libnotify +, libpng +, libstartup_notification +, libvpx +, libwebp +, llvmPackages +, m4 +, makeDesktopItem +, nasm +, nodejs +, nspr +, nss +, pango +, perl +, pkgconfig +, python2 +, python3 , runtimeShell -, cargo, rustc, rust-cbindgen, llvmPackages, nasm -, enableGTK3 ? false, gtk3, gnome3, wrapGAppsHook, makeWrapper -, enableCalendar ? true +, rust-cbindgen +, rustc +, sqlite +, stdenv +, unzip +, which +, writeScript +, xidel +, xorg +, yasm +, zip +, zlib + , debugBuild ? false + +, alsaSupport ? stdenv.isLinux, alsaLib +, pulseaudioSupport ? stdenv.isLinux, libpulseaudio +, gtk3Support ? true, gtk2, gtk3, wrapGAppsHook +, waylandSupport ? true +, libxkbcommon, calendarSupport ? true + , # If you want the resulting program to call itself "Thunderbird" instead - # of "Earlybird" or whatever, enable this option. However, those - # binaries may not be distributed without permission from the - # Mozilla Foundation, see - # http://www.mozilla.org/foundation/trademarks/. - enableOfficialBranding ? false -, makeDesktopItem +# of "Earlybird" or whatever, enable this option. However, those +# binaries may not be distributed without permission from the +# Mozilla Foundation, see +# http://www.mozilla.org/foundation/trademarks/. +enableOfficialBranding ? false }: -let - wrapperTool = if enableGTK3 then wrapGAppsHook else makeWrapper; - gcc = if stdenv.cc.isGNU then stdenv.cc.cc else stdenv.cc.cc.gcc; -in stdenv.mkDerivation rec { +assert waylandSupport -> gtk3Support == true; + +stdenv.mkDerivation rec { pname = "thunderbird"; - version = "68.2.2"; + version = "68.3.0"; src = fetchurl { - url = "mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz"; - sha512 = "3mvanjfc35f14lsfa4zjlhsvwij1n9dz9xmisd5s376r5wp9y33sva5ly914b2hmdl85ypdwv90zyi6whj7jb2f2xmqk480havxgjcn"; + url = + "mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz"; + sha512 = + "3aqr3dj5laws516k6jf8f35a1964p0s75sp682yy87xnzgd8m1iha55z79dcavis2ma9hiyacjnznjz04qhqd4q8swjgfg7lj8lyiwl"; }; - # from firefox, but without sound libraries - buildInputs = - [ gtk2 zip libIDL libjpeg zlib bzip2 - dbus dbus-glib pango freetype fontconfig xorg.libXi - xorg.libX11 xorg.libXrender xorg.libXft xorg.libXt file - nspr nss libnotify xorg.pixman yasm libGLU libGL - xorg.libXScrnSaver xorg.xorgproto - xorg.libXext sqlite unzip - libevent libstartup_notification /* cairo */ - icu libpng jemalloc nasm - ] - ++ lib.optionals enableGTK3 [ gtk3 gnome3.adwaita-icon-theme ]; - - # from firefox + m4 + wrapperTool - # llvm is for llvm-objdump - nativeBuildInputs = [ m4 autoconf213 which gnused pkgconfig perl python2 python3 nodejs wrapperTool cargo rustc rust-cbindgen llvmPackages.llvm ]; + nativeBuildInputs = [ + autoconf213 + cargo + gnused + llvmPackages.llvm + m4 + nasm + nodejs + perl + pkgconfig + python2 + python3 + rust-cbindgen + rustc + which + yasm + ] ++ lib.optional gtk3Support wrapGAppsHook; + + buildInputs = [ + bzip2 + dbus + dbus-glib + file + fontconfig + freetype + glib + gtk2 + icu + jemalloc + libGL + libGLU + libIDL + libevent + libjpeg + libnotify + libpng + libstartup_notification + libvpx + libwebp + nspr + nss + pango + perl + sqlite + unzip + xorg.libX11 + xorg.libXScrnSaver + xorg.libXcursor + xorg.libXext + xorg.libXft + xorg.libXi + xorg.libXrender + xorg.libXt + xorg.pixman + xorg.xorgproto + zip + zlib + ] ++ lib.optional alsaSupport alsaLib + ++ lib.optional gtk3Support gtk3 + ++ lib.optional pulseaudioSupport libpulseaudio + ++ lib.optional waylandSupport libxkbcommon; + + NIX_CFLAGS_COMPILE =[ + "-I${glib.dev}/include/gio-unix-2.0" + "-I${nss.dev}/include/nss" + ]; patches = [ - # Remove buildconfig.html to prevent a dependency on clang etc. ./no-buildconfig.patch - ] - ++ lib.optional (lib.versionOlder version "69") - (fetchpatch { # https://bugzilla.mozilla.org/show_bug.cgi?id=1500436#c29 - name = "write_error-parallel_make.diff"; - url = "https://hg.mozilla.org/mozilla-central/raw-diff/562655fe/python/mozbuild/mozbuild/action/node.py"; - sha256 = "11d7rgzinb4mwl7yzhidjkajynmxgmffr4l9isgskfapyax9p88y"; - }); - - configureFlags = - [ # from firefox, but without sound libraries (alsa, libvpx, pulseaudio) - "--enable-application=comm/mail" - "--disable-alsa" - "--disable-pulseaudio" - - "--with-system-jpeg" - "--with-system-zlib" - "--with-system-bz2" - "--with-system-nspr" - "--with-system-nss" - "--with-system-libevent" - "--with-system-png" # needs APNG support - "--with-system-icu" - #"--enable-rust-simd" # not supported since rustc 1.32.0 -> 1.33.0; TODO: probably OK since 68.0.0 - "--enable-system-ffi" - "--enable-system-pixman" - "--enable-system-sqlite" - #"--enable-system-cairo" - "--enable-startup-notification" - "--disable-crashreporter" - "--disable-tests" - "--disable-necko-wifi" # maybe we want to enable this at some point - "--disable-updater" - "--enable-jemalloc" - "--disable-gconf" - "--enable-default-toolkit=cairo-gtk${if enableGTK3 then "3" else "2"}" - "--enable-js-shell" - ] - ++ lib.optional enableCalendar "--enable-calendar" - ++ (if debugBuild then [ "--enable-debug" "--enable-profiling"] - else [ "--disable-debug" "--enable-release" - "--disable-debug-symbols" - "--enable-optimize" "--enable-strip" ]) - ++ lib.optional enableOfficialBranding "--enable-official-branding" - ++ lib.optionals (lib.versionAtLeast version "56" && !stdenv.hostPlatform.isi686) [ - # on i686-linux: --with-libclang-path is not available in this configuration - "--with-libclang-path=${llvmPackages.libclang}/lib" - "--with-clang-path=${llvmPackages.clang}/bin/clang" - ]; + ]; - enableParallelBuilding = true; + postPatch = '' + rm -rf obj-x86_64-pc-linux-gnu + ''; - preConfigure = - '' - cxxLib=$( echo -n ${gcc}/include/c++/* ) - archLib=$cxxLib/$( ${gcc}/bin/gcc -dumpmachine ) - - test -f layout/style/ServoBindings.toml && sed -i -e '/"-DRUST_BINDGEN"/ a , "-cxx-isystem", "'$cxxLib'", "-isystem", "'$archLib'"' layout/style/ServoBindings.toml - - configureScript="$(realpath ./configure)" - mkdir ../objdir - cd ../objdir - - # AS=as in the environment causes build failure https://bugzilla.mozilla.org/show_bug.cgi?id=1497286 - unset AS - ''; - - dontWrapGApps = true; # we do it ourselves - postInstall = - '' - # TODO: Move to a dev output? - rm -rf $out/include $out/lib/thunderbird-devel-* $out/share/idl - - # $binary is a symlink to $target. - # We wrap $target by replacing the $binary symlink. - local target="$out/lib/thunderbird/thunderbird" - local binary="$out/bin/thunderbird" - - # Wrap correctly, this is needed to - # 1) find Mozilla runtime, because argv0 must be the real thing, - # or a symlink thereto. It cannot be the wrapper itself - # 2) detect itself as the default mailreader across builds - gappsWrapperArgs+=( - --argv0 "$target" - --set MOZ_APP_LAUNCHER thunderbird - # See commit 87e261843c4236c541ee0113988286f77d2fa1ee - --set MOZ_LEGACY_PROFILES 1 - --set MOZ_ALLOW_DOWNGRADE 1 - # https://github.com/NixOS/nixpkgs/pull/61980 - --set SNAP_NAME "thunderbird" - ) + preConfigure = '' + # remove distributed configuration files + rm -f configure + rm -f js/src/configure + rm -f .mozconfig* + + configureScript="$(realpath ./mach) configure" + # AS=as in the environment causes build failure https://bugzilla.mozilla.org/show_bug.cgi?id=1497286 + unset AS + + export MOZCONFIG=$(pwd)/mozconfig + + # Set C flags for Rust's bindgen program. Unlike ordinary C + # compilation, bindgen does not invoke $CC directly. Instead it + # uses LLVM's libclang. To make sure all necessary flags are + # included we need to look in a few places. + # TODO: generalize this process for other use-cases. + + BINDGEN_CFLAGS="$(< ${stdenv.cc}/nix-support/libc-cflags) \ + $(< ${stdenv.cc}/nix-support/cc-cflags) \ + ${stdenv.cc.default_cxx_stdlib_compile} \ + ${ + lib.optionalString stdenv.cc.isClang + "-idirafter ${stdenv.cc.cc}/lib/clang/${ + lib.getVersion stdenv.cc.cc + }/include" + } \ ${ - # We wrap manually because wrapGAppsHook does not detect the symlink - # To mimic wrapGAppsHook, we run it with dontWrapGApps, so - # gappsWrapperArgs gets defined correctly - lib.optionalString enableGTK3 "wrapGAppsHook" - } - - # "$binary" is a symlink, replace it by the wrapper - rm "$binary" - makeWrapper "$target" "$binary" "''${gappsWrapperArgs[@]}" - - ${ let desktopItem = makeDesktopItem { - name = "thunderbird"; - exec = "thunderbird %U"; - desktopName = "Thunderbird"; - icon = "$out/lib/thunderbird/chrome/icons/default/default256.png"; - genericName = "Mail Reader"; - categories = "Application;Network"; - mimeType = stdenv.lib.concatStringsSep ";" [ - # Email - "x-scheme-handler/mailto" - "message/rfc822" - # Newsgroup - "x-scheme-handler/news" - "x-scheme-handler/snews" - "x-scheme-handler/nntp" - # Feed - "x-scheme-handler/feed" - "application/rss+xml" - "application/x-extension-rss" - ]; - }; in desktopItem.buildCommand - } - ''; - - postFixup = - # Fix notifications. LibXUL uses dlopen for this, unfortunately; see #18712. - '' - patchelf --set-rpath "${lib.getLib libnotify - }/lib:$(patchelf --print-rpath "$out"/lib/thunderbird*/libxul.so)" \ - "$out"/lib/thunderbird*/libxul.so - ''; + lib.optionalString stdenv.cc.isGNU + "-isystem ${stdenv.cc.cc}/include/c++/${ + lib.getVersion stdenv.cc.cc + } -isystem ${stdenv.cc.cc}/include/c++/${ + lib.getVersion stdenv.cc.cc + }/$(cc -dumpmachine)" + } \ + $NIX_CFLAGS_COMPILE" - doInstallCheck = true; - installCheckPhase = - '' - # Some basic testing - "$out/bin/thunderbird" --version - ''; + echo "ac_add_options BINDGEN_CFLAGS='$BINDGEN_CFLAGS'" >> $MOZCONFIG + ''; - disallowedRequisites = [ stdenv.cc ]; + configureFlags = let + toolkitSlug = if gtk3Support then + "3${lib.optionalString waylandSupport "-wayland"}" + else + "2"; + toolkitValue = "cairo-gtk${toolkitSlug}"; + in [ + "--enable-application=comm/mail" - meta = with stdenv.lib; { - description = "A full-featured e-mail client"; - homepage = http://www.mozilla.org/thunderbird/; - license = - # Official branding implies thunderbird name and logo cannot be reuse, - # see http://www.mozilla.org/foundation/licensing.html - if enableOfficialBranding then licenses.proprietary else licenses.mpl11; - maintainers = [ maintainers.pierron maintainers.eelco ]; - platforms = platforms.linux; - }; + "--with-system-bz2" + "--with-system-icu" + "--with-system-jpeg" + "--with-system-libevent" + "--with-system-nspr" + "--with-system-nss" + "--with-system-png" # needs APNG support + "--with-system-icu" + "--with-system-zlib" + "--with-system-webp" + "--with-system-libvpx" + + "--enable-rust-simd" + "--enable-crashreporter" + "--enable-default-toolkit=${toolkitValue}" + "--enable-js-shell" + "--enable-necko-wifi" + "--enable-startup-notification" + "--enable-system-ffi" + "--enable-system-pixman" + "--enable-system-sqlite" + + "--disable-gconf" + "--disable-tests" + "--disable-updater" + "--enable-jemalloc" + ] ++ (if debugBuild then [ + "--enable-debug" + "--enable-profiling" + ] else [ + "--disable-debug" + "--enable-release" + "--disable-debug-symbols" + "--enable-optimize" + "--enable-strip" + ]) ++ lib.optionals (!stdenv.hostPlatform.isi686) [ + # on i686-linux: --with-libclang-path is not available in this configuration + "--with-libclang-path=${llvmPackages.libclang}/lib" + "--with-clang-path=${llvmPackages.clang}/bin/clang" + ] ++ lib.optional alsaSupport "--enable-alsa" + ++ lib.optional calendarSupport "--enable-calendar" + ++ lib.optional enableOfficialBranding "--enable-official-branding" + ++ lib.optional pulseaudioSupport "--enable-pulseaudio"; + + enableParallelBuilding = true; + + postConfigure = '' + cd obj-* + ''; + + makeFlags = lib.optionals enableOfficialBranding [ + "MOZILLA_OFFICIAL=1" + "BUILD_OFFICIAL=1" + ]; + + doCheck = false; + + postInstall = let + desktopItem = makeDesktopItem { + categories = lib.concatStringsSep ";" [ "Application" "Network" ]; + desktopName = "Thunderbird"; + genericName = "Mail Reader"; + name = "thunderbird"; + exec = "thunderbird %U"; + icon = "$out/lib/thunderbird/chrome/icons/default/default256.png"; + mimeType = lib.concatStringsSep ";" [ + # Email + "x-scheme-handler/mailto" + "message/rfc822" + # Feeds + "x-scheme-handler/feed" + "application/rss+xml" + "application/x-extension-rss" + # Newsgroups + "x-scheme-handler/news" + "x-scheme-handler/snews" + "x-scheme-handler/nntp" + ]; + }; + in '' + # TODO: Move to a dev output? + rm -rf $out/include $out/lib/thunderbird-devel-* $out/share/idl + + ${desktopItem.buildCommand} + ''; + + preFixup = '' + # Needed to find Mozilla runtime + gappsWrapperArgs+=( + --argv0 "$out/bin/thunderbird" + --set MOZ_APP_LAUNCHER thunderbird + # https://github.com/NixOS/nixpkgs/pull/61980 + --set SNAP_NAME "thunderbird" + --set MOZ_LEGACY_PROFILES 1 + --set MOZ_ALLOW_DOWNGRADE 1 + ) + ''; + + # FIXME: This can probably be removed as soon as we package a + # Thunderbird >=71.0 since XUL shouldn't be anymore (in use)? + postFixup = '' + local xul="$out/lib/thunderbird/libxul.so" + patchelf --set-rpath "${libnotify}/lib:$(patchelf --print-rpath $xul)" $xul + ''; + + doInstallCheck = true; + installCheckPhase = '' + "$out/bin/thunderbird" --version + ''; + + disallowedRequisites = [ + stdenv.cc + ]; passthru.updateScript = import ./../../browsers/firefox/update.nix { attrPath = "thunderbird"; baseUrl = "http://archive.mozilla.org/pub/thunderbird/releases/"; - inherit writeScript lib common-updater-scripts xidel coreutils gnused gnugrep curl runtimeShell; + inherit writeScript lib common-updater-scripts xidel coreutils gnused + gnugrep curl runtimeShell; + }; + + meta = with stdenv.lib; { + description = "A full-featured e-mail client"; + homepage = "https://www.thunderbird.net"; + maintainers = with maintainers; [ + eelco + lovesegfault + pierron + ]; + platforms = platforms.linux; }; } diff --git a/pkgs/applications/networking/mumble/default.nix b/pkgs/applications/networking/mumble/default.nix index fe4c9f32b21..dfb49e14133 100644 --- a/pkgs/applications/networking/mumble/default.nix +++ b/pkgs/applications/networking/mumble/default.nix @@ -16,7 +16,8 @@ assert iceSupport -> zeroc-ice != null; with stdenv.lib; let generic = overrides: source: qt5.mkDerivation (source // overrides // { - name = "${overrides.type}-${source.version}"; + pname = overrides.type; + version = source.version; patches = (source.patches or []) ++ optional jackSupport ./mumble-jack-support.patch; @@ -63,9 +64,9 @@ let meta = { description = "Low-latency, high quality voice chat software"; - homepage = https://mumble.info; + homepage = "https://mumble.info"; license = licenses.bsd3; - maintainers = with maintainers; [ ]; + maintainers = with maintainers; [ petabyteboy ]; platforms = platforms.linux; }; }); diff --git a/pkgs/applications/networking/nextcloud-client/default.nix b/pkgs/applications/networking/nextcloud-client/default.nix index 974d1e5a077..71fce57504c 100644 --- a/pkgs/applications/networking/nextcloud-client/default.nix +++ b/pkgs/applications/networking/nextcloud-client/default.nix @@ -12,7 +12,6 @@ , qtkeychain , qttools , qtwebengine -, qtwebkit , sqlite }: @@ -45,7 +44,6 @@ mkDerivation rec { qtkeychain qttools qtwebengine - qtwebkit sqlite ]; @@ -55,6 +53,7 @@ mkDerivation rec { cmakeFlags = [ "-DCMAKE_INSTALL_LIBDIR=lib" # expected to be prefix-relative by build code setting RPATH + "-DNO_SHIBBOLETH=1" # allows to compile without qtwebkit ]; meta = with lib; { diff --git a/pkgs/applications/networking/owncloud-client/default.nix b/pkgs/applications/networking/owncloud-client/default.nix index c674956066a..998944838e8 100644 --- a/pkgs/applications/networking/owncloud-client/default.nix +++ b/pkgs/applications/networking/owncloud-client/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, mkDerivation, cmake, pkgconfig, qtbase, qtwebkit, qtkeychain, sqlite }: +{ stdenv, fetchurl, mkDerivation, cmake, pkgconfig, qtbase, qtkeychain, sqlite }: mkDerivation rec { pname = "owncloud-client"; @@ -10,10 +10,11 @@ mkDerivation rec { }; nativeBuildInputs = [ pkgconfig cmake ]; - buildInputs = [ qtbase qtwebkit qtkeychain sqlite ]; + buildInputs = [ qtbase qtkeychain sqlite ]; cmakeFlags = [ "-UCMAKE_INSTALL_LIBDIR" + "-DNO_SHIBBOLETH=1" ]; enableParallelBuilding = true; diff --git a/pkgs/applications/networking/p2p/firestr/default.nix b/pkgs/applications/networking/p2p/firestr/default.nix deleted file mode 100644 index 56eb9c35427..00000000000 --- a/pkgs/applications/networking/p2p/firestr/default.nix +++ /dev/null @@ -1,36 +0,0 @@ -{ stdenv, fetchFromGitHub, cmake, boost, botan, snappy, libopus, libuuid -, libXScrnSaver, openssl, qtbase, qtmultimedia }: - -stdenv.mkDerivation { - name = "firestr-0.8"; - - src = fetchFromGitHub { - owner = "mempko"; - repo = "firestr"; - rev = "f888890f71d49953d05bccdd27a1c4f6690e165c"; - sha256 = "0s2kdi8rw3i3f8gbiy0ykyi6xj5n8p80m0d1i86mhh8jpagvbfzb"; - }; - - buildInputs = [ cmake boost botan snappy libopus libuuid qtbase qtmultimedia - libXScrnSaver openssl ]; - - patches = ./return.patch; - - postPatch = '' - substituteInPlace CMakeLists.txt \ - --replace "set(Boost_USE_STATIC_LIBS on)" "" \ - --replace "/usr/include/botan" "${botan}/include/botan" \ - --replace "libopus.a" "libopus.so" \ - --replace "libsnappy.a" "libsnappy.so" \ - --replace "libbotan-1.10.a" "libbotan-1.10.so.0" - ''; - - meta = with stdenv.lib; { - description = "Grass computing platform"; - homepage = http://firestr.com/; - license = licenses.gpl3; - maintainers = [ maintainers.ehmry ]; - platforms = platforms.linux; - broken = true; - }; -} diff --git a/pkgs/applications/networking/p2p/firestr/return.patch b/pkgs/applications/networking/p2p/firestr/return.patch deleted file mode 100644 index c3e469ae92b..00000000000 --- a/pkgs/applications/networking/p2p/firestr/return.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/message/master_post.cpp b/src/message/master_post.cpp -index c3a5ea9..7c821b9 100644 ---- a/src/message/master_post.cpp -+++ b/src/message/master_post.cpp -@@ -56,7 +56,7 @@ namespace fire - - metadata::encryption_type to_message_encryption_type(sc::encryption_type s) - { -- metadata::encryption_type r; -+ metadata::encryption_type r = metadata::encryption_type::asymmetric; - switch(s) - { - case sc::encryption_type::plaintext: r = metadata::encryption_type::plaintext; break; diff --git a/pkgs/applications/networking/p2p/gnunet/default.nix b/pkgs/applications/networking/p2p/gnunet/default.nix index eaa6b07c8fa..a461b1fbd74 100644 --- a/pkgs/applications/networking/p2p/gnunet/default.nix +++ b/pkgs/applications/networking/p2p/gnunet/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "gnunet"; - version = "0.11.6"; + version = "0.11.8"; src = fetchurl { url = "mirror://gnu/gnunet/${pname}-${version}.tar.gz"; - sha256 = "1gspr1lh885sb9r2anh7bi4zan3zjqx33lpyhq9hm2g0n5ip187q"; + sha256 = "1zkmcq75sfr3iyg8rgxp9dbl7fwsvc1a71rc0vgisghcbrx1n7yj"; }; enableParallelBuilding = true; diff --git a/pkgs/applications/networking/p2p/qbittorrent/default.nix b/pkgs/applications/networking/p2p/qbittorrent/default.nix index aebdeda6108..173b4f02cdf 100644 --- a/pkgs/applications/networking/p2p/qbittorrent/default.nix +++ b/pkgs/applications/networking/p2p/qbittorrent/default.nix @@ -10,13 +10,13 @@ with lib; mkDerivation rec { pname = "qbittorrent"; - version = "4.1.9.1"; + version = "4.2.0"; src = fetchFromGitHub { owner = "qbittorrent"; repo = "qbittorrent"; rev = "release-${version}"; - sha256 = "19zgqlby7i1kr20wa4zd99qzd062a879xxxbmlf40rnqiqy4bhyi"; + sha256 = "17vm6aa2k8k1q14z9r2r06c794bcr4m0l0fdsn08wid6mj1zjsbx"; }; # NOTE: 2018-05-31: CMake is working but it is not officially supported diff --git a/pkgs/applications/networking/remote/anydesk/default.nix b/pkgs/applications/networking/remote/anydesk/default.nix index 03a2ef9551b..82b6614fcb6 100644 --- a/pkgs/applications/networking/remote/anydesk/default.nix +++ b/pkgs/applications/networking/remote/anydesk/default.nix @@ -5,8 +5,8 @@ let sha256 = { - x86_64-linux = "0dcg9znjxpnysypznnnq4xbaciiqz8l4p1hrbis3pazwi7bakizs"; - i386-linux = "04bvsvqjkayac17y9jcpdcfm3hzm2kq1brd9vwnx34gg07x9mn7g"; + x86_64-linux = "1ysd8fwzm0360qs6ijr6l0y2agqb3njz20h7am1x4kxmhy8ravq9"; + i386-linux = "0vjxbg5hwkqkh600rr75xviwy848r1xw9mxwf6bb6l8b0isvlsgg"; }.${stdenv.hostPlatform.system} or (throw "system ${stdenv.hostPlatform.system} not supported"); arch = { @@ -28,10 +28,13 @@ let in stdenv.mkDerivation rec { pname = "anydesk"; - version = "5.5.0"; + version = "5.5.1"; src = fetchurl { - url = "https://download.anydesk.com/linux/${pname}-${version}-${arch}.tar.gz"; + urls = [ + "https://download.anydesk.com/linux/${pname}-${version}-${arch}.tar.gz" + "https://download.anydesk.com/linux/generic-linux/${pname}-${version}-${arch}.tar.gz" + ]; inherit sha256; }; diff --git a/pkgs/applications/networking/remote/citrix-workspace/default.nix b/pkgs/applications/networking/remote/citrix-workspace/default.nix index dc6f85f2130..a4deda99f5b 100644 --- a/pkgs/applications/networking/remote/citrix-workspace/default.nix +++ b/pkgs/applications/networking/remote/citrix-workspace/default.nix @@ -24,7 +24,7 @@ , gtk_engines , alsaLib , zlib -, version ? "19.10.0" +, version ? "19.12.0" }: let @@ -71,7 +71,18 @@ let x86hash = "000zjik8wf8b6fadnsai0p77b4n2l95544zx503iyrb9pv53bj3y"; x64suffix = "15"; x86suffix = "15"; - homepage = https://www.citrix.com/downloads/workspace-app/linux/workspace-app-for-linux-latest1.html; + homepage = https://www.citrix.com/downloads/workspace-app/legacy-workspace-app-for-linux/workspace-app-for-linux-1910.html; + }; + + "19.12.0" = { + major = "19"; + minor = "12"; + patch = "0"; + x64hash = "1si5mkxbgb8m99bkvgc3l80idjfdp0kby6pv47s07nn43dbr1j7a"; + x86hash = "07rfp90ksnvr8zv7ix7f0z6a59n48s7bd4kqbzilfwxgs4ddqmcy"; + x64suffix = "19"; + x86suffix = "19"; + homepage = https://www.citrix.com/de-de/downloads/workspace-app/linux/workspace-app-for-linux-latest.html; }; }; diff --git a/pkgs/applications/networking/remote/remmina/default.nix b/pkgs/applications/networking/remote/remmina/default.nix index adb70c3916f..5324ae86e52 100644 --- a/pkgs/applications/networking/remote/remmina/default.nix +++ b/pkgs/applications/networking/remote/remmina/default.nix @@ -4,7 +4,7 @@ , pcre, libdbusmenu-gtk3, libappindicator-gtk3 , libvncserver, libpthreadstubs, libXdmcp, libxkbcommon , libsecret, libsoup, spice-protocol, spice-gtk, epoxy, at-spi2-core -, openssl, gsettings-desktop-schemas, json-glib +, openssl, gsettings-desktop-schemas, json-glib, libsodium, webkitgtk, harfbuzz # The themes here are soft dependencies; only icons are missing without them. , gnome3 }: @@ -13,13 +13,13 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "remmina"; - version = "1.3.4"; + version = "1.3.7"; src = fetchFromGitLab { owner = "Remmina"; repo = "Remmina"; rev = "v${version}"; - sha256 = "18p6v2lalpiba0r318grlc2bvqh2qlpjw811i0934g33faviyfj1"; + sha256 = "076vz6nzs8v4d44dklsfgmwyhp48c2iywixg032znz193anjcgqn"; }; nativeBuildInputs = [ cmake ninja pkgconfig wrapGAppsHook ]; @@ -30,7 +30,8 @@ stdenv.mkDerivation rec { pcre libdbusmenu-gtk3 libappindicator-gtk3 libvncserver libpthreadstubs libXdmcp libxkbcommon libsecret libsoup spice-protocol spice-gtk epoxy at-spi2-core - openssl gnome3.adwaita-icon-theme json-glib + openssl gnome3.adwaita-icon-theme json-glib libsodium webkitgtk + harfbuzz ]; cmakeFlags = [ diff --git a/pkgs/applications/networking/sync/onedrive/default.nix b/pkgs/applications/networking/sync/onedrive/default.nix index 0767ce2f294..dc38debd305 100644 --- a/pkgs/applications/networking/sync/onedrive/default.nix +++ b/pkgs/applications/networking/sync/onedrive/default.nix @@ -8,13 +8,13 @@ stdenv.mkDerivation rec { pname = "onedrive"; - version = "2.3.11"; + version = "2.3.12"; src = fetchFromGitHub { owner = "abraunegg"; repo = "onedrive"; rev = "v${version}"; - sha256 = "08k5b3izqzk9mjjny5y47i3q5sl0w37xdqrhaacjxwm0jib9w0mh"; + sha256 = "0605nb3blvnncjx09frg2liarrd6pw8ph5jhnh764qcx0hyxcgs6"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/networking/syncthing/add-stcli-target.patch b/pkgs/applications/networking/syncthing/add-stcli-target.patch index 58ac15253ae..07b5e334b2c 100644 --- a/pkgs/applications/networking/syncthing/add-stcli-target.patch +++ b/pkgs/applications/networking/syncthing/add-stcli-target.patch @@ -1,17 +1,17 @@ -diff --git i/build.go w/build.go -index 7d400d6f..1b5e1d25 100644 ---- i/build.go -+++ w/build.go -@@ -175,6 +175,12 @@ var targets = map[string]target{ +diff --git a/build.go b/build.go +index c8a5c1cf..d75a8491 100644 +--- a/build.go ++++ b/build.go +@@ -202,6 +202,12 @@ var targets = map[string]target{ {src: "AUTHORS", dst: "deb/usr/share/doc/syncthing-relaypoolsrv/AUTHORS.txt", perm: 0644}, }, }, + "stcli": { + name: "stcli", + description: "Syncthing CLI", -+ buildPkg: "github.com/syncthing/syncthing/cmd/stcli", -+ binaryName: "stcli", // .exe will be added automatically for Windows builds ++ buildPkgs: []string{"github.com/syncthing/syncthing/cmd/stcli"}, ++ binaryName: "stcli", + }, } - func init() { + // These are repos we need to clone to run "go generate" diff --git a/pkgs/applications/networking/syncthing/default.nix b/pkgs/applications/networking/syncthing/default.nix index 555550d4d9e..c7663ef4117 100644 --- a/pkgs/applications/networking/syncthing/default.nix +++ b/pkgs/applications/networking/syncthing/default.nix @@ -3,19 +3,19 @@ let common = { stname, target, postInstall ? "" }: buildGoModule rec { - version = "1.3.0"; + version = "1.3.2"; name = "${stname}-${version}"; src = fetchFromGitHub { owner = "syncthing"; repo = "syncthing"; rev = "v${version}"; - sha256 = "14k1acap9y1z8sj28gcn72lkfxdzpcqj9d27hk8vzm47zjaxgp8l"; + sha256 = "029mym3vdfg616gpmhv6p22iy65h8vff2sq6z70l37bjf3zx1cms"; }; goPackagePath = "github.com/syncthing/syncthing"; - modSha256 = "17np8ym84ql7hwzsqfx2l6yiy9hag7h96q8ysvarlfg9l95g1m64"; + modSha256 = "06anhfi9mswmwhhjyz8mla6h8v83cc7slfr752fvgfaxra1fwgx8"; patches = [ ./add-stcli-target.patch diff --git a/pkgs/applications/office/aesop/default.nix b/pkgs/applications/office/aesop/default.nix index b637f6bbf06..5bb66245328 100644 --- a/pkgs/applications/office/aesop/default.nix +++ b/pkgs/applications/office/aesop/default.nix @@ -1,5 +1,5 @@ { stdenv, vala, fetchFromGitHub, pantheon, pkgconfig, meson, ninja, python3, gtk3 -, desktop-file-utils, json-glib, libsoup, libgee, poppler, wrapGAppsHook }: +, desktop-file-utils, json-glib, libsoup, libgee, poppler, wrapGAppsHook, fetchpatch }: stdenv.mkDerivation rec { pname = "aesop"; @@ -12,6 +12,15 @@ stdenv.mkDerivation rec { sha256 = "1hnwhxaz0zx4fswrxjzyv5s77v5fimn87yid9sd1qgfv2g1ck0jc"; }; + patches = [ + # Fix build + # https://github.com/lainsce/aesop/pull/33 + (fetchpatch { + url = "https://github.com/lainsce/aesop/commit/850ec86bbfef5168e537a5af7e0d73d96db56330.patch"; + sha256 = "14b251wp11rypqw4fafwjbsqy92mxzr8mmaxlv7n4whvwxrzqirh"; + }) + ]; + nativeBuildInputs = [ desktop-file-utils meson diff --git a/pkgs/applications/office/fava/default.nix b/pkgs/applications/office/fava/default.nix index 6b26870ee44..6693d35dbd1 100644 --- a/pkgs/applications/office/fava/default.nix +++ b/pkgs/applications/office/fava/default.nix @@ -5,11 +5,11 @@ let in buildPythonApplication rec { pname = "fava"; - version = "1.11"; + version = "1.12"; src = fetchPypi { inherit pname version; - sha256 = "0gyrxqmfr8igfjnp9lcsl4km17yakj556xns3jp4m9l2407b5zhc"; + sha256 = "0309y25l7aijk7il9hpjia23yc5dfac0h78xdmzb0w0ynxbjsmi6"; }; checkInputs = [ python3.pkgs.pytest ]; @@ -25,6 +25,7 @@ buildPythonApplication rec { markdown2 ply simplejson + werkzeug jaraco_functools ]; diff --git a/pkgs/applications/office/flexibee/default.nix b/pkgs/applications/office/flexibee/default.nix index 831d8cbcf2a..f80620a2bf7 100644 --- a/pkgs/applications/office/flexibee/default.nix +++ b/pkgs/applications/office/flexibee/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, makeWrapper, jre }: let - version = "2019.3.0.7"; + version = "2019.3.1.1"; majorVersion = builtins.substring 0 6 version; in @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://download.flexibee.eu/download/${majorVersion}/${version}/${pname}-${version}.tar.gz"; - sha256 = "01n2pkh17s2iab7n9xgq9vqcf1fnzmb382zmmd1lwyw3x57f5rq2"; + sha256 = "0zlxbdwcb0xb0bx4nvj6dn0vpw21czgf196bjlkk1547j6146p1p"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/applications/office/minetime/default.nix b/pkgs/applications/office/minetime/default.nix index 85e8bc131ce..42802409e59 100644 --- a/pkgs/applications/office/minetime/default.nix +++ b/pkgs/applications/office/minetime/default.nix @@ -1,15 +1,32 @@ -{ appimageTools, fetchurl, lib, gsettings-desktop-schemas, gtk3 }: +{ appimageTools, fetchurl, lib, runCommandNoCC, stdenv, gsettings-desktop-schemas, gtk3, zlib }: let - pname = "minetime"; - version = "1.5.1"; -in -appimageTools.wrapType2 rec { name = "${pname}-${version}"; - src = fetchurl { - url = "https://github.com/marcoancona/MineTime/releases/download/v${version}/${name}-x86_64.AppImage"; - sha256 = "0099cq4p7j01bzs7q79y9xi7g6ji17v9g7cykfjggwsgqfmvd0hz"; + pname = "minetime"; + version = "1.7.3"; + appimage = fetchurl { + url = "https://github.com/marcoancona/MineTime/releases/download/v${version}/${name}.AppImage"; + sha256 = "0zz6p3mwxg9gm1sqzs582pq2nkb10lv0c3r542b9llqyzk9qv5aa"; + }; + extracted = appimageTools.extractType2 { + inherit name; + src = appimage; }; + patched = runCommandNoCC "minetime-patchelf" {} '' + cp -av ${extracted} $out + + x=$out/resources/app.asar.unpacked/services/scheduling/dist/MinetimeSchedulingService + chmod +w $x + + patchelf \ + --set-interpreter ${stdenv.cc.bintools.dynamicLinker} \ + --replace-needed libz.so.1 ${zlib}/lib/libz.so.1 \ + $x + ''; +in +appimageTools.wrapAppImage rec { + inherit name; + src = patched; profile = '' export LC_ALL=C.UTF-8 @@ -17,7 +34,9 @@ appimageTools.wrapType2 rec { ''; multiPkgs = null; # no 32bit needed - extraPkgs = appimageTools.defaultFhsEnvArgs.multiPkgs; + extraPkgs = ps: + appimageTools.defaultFhsEnvArgs.multiPkgs ps + ++ (with ps; [ at-spi2-core at-spi2-atk libsecret libnotify ]); extraInstallCommands = "mv $out/bin/{${name},${pname}}"; meta = with lib; { diff --git a/pkgs/applications/office/mmex/default.nix b/pkgs/applications/office/mmex/default.nix index 99824cd19ec..ed33d121a05 100644 --- a/pkgs/applications/office/mmex/default.nix +++ b/pkgs/applications/office/mmex/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchgit, sqlite, wxGTK30, gettext }: +{ stdenv, fetchgit, sqlite, wxGTK30, gettext, wrapGAppsHook }: let @@ -14,7 +14,16 @@ in sha256 = "0r4n93z3scv0i0zqflsxwv7j4yl8jy3gr0m4l30y1q8qv0zj9n74"; }; - buildInputs = [ sqlite wxGTK30 gettext ]; + nativeBuildInputs = [ + wrapGAppsHook + ]; + + buildInputs = [ + gettext + sqlite + wxGTK30 + wxGTK30.gtk + ]; meta = { description = "Easy-to-use personal finance software"; diff --git a/pkgs/applications/office/pympress/default.nix b/pkgs/applications/office/pympress/default.nix index 5cb20e4d613..2ce6e8a0220 100644 --- a/pkgs/applications/office/pympress/default.nix +++ b/pkgs/applications/office/pympress/default.nix @@ -42,7 +42,7 @@ python3Packages.buildPythonApplication rec { meta = with lib; { description = "Simple yet powerful PDF reader designed for dual-screen presentations"; license = licenses.gpl2Plus; - homepage = "https://pympress.xyz/"; + homepage = "https://cimbali.github.io/pympress/"; maintainers = [ maintainers.tbenst ]; }; } diff --git a/pkgs/applications/office/skrooge/default.nix b/pkgs/applications/office/skrooge/default.nix index fd68896ca67..f1148f66524 100644 --- a/pkgs/applications/office/skrooge/default.nix +++ b/pkgs/applications/office/skrooge/default.nix @@ -7,21 +7,13 @@ mkDerivation rec { pname = "skrooge"; - version = "2.20.0"; + version = "2.21.0"; src = fetchurl { url = "http://download.kde.org/stable/skrooge/${pname}-${version}.tar.xz"; - sha256 = "0rakfngp7j2x7h1isg6lbc5kva6k1kg99dz0zl43dc28s15can1w"; + sha256 = "1aqn0367q7mdg728r5085aqzc4mgfz1bgqqlhgdjjp7r192yq7r2"; }; - patches = [ - (fetchpatch { - name = "skrooge-2.20.0-missing-header.patch"; - url = "https://gitweb.gentoo.org/repo/gentoo.git/plain/app-office/skrooge/files/skrooge-2.20.0-missing-header.patch?id=cb8c91474b0ae2f9e889f89afe2d9114dbd1784f"; - sha256 = "154zsidx45h6qrcqjh6czjxrcwrcmbyv3yh2k1s40v8pzvjwzrld"; - }) - ]; - nativeBuildInputs = [ cmake extra-cmake-modules kdoctools shared-mime-info ]; diff --git a/pkgs/applications/office/tryton/default.nix b/pkgs/applications/office/tryton/default.nix index 4422aaa2b44..971f2f645f8 100644 --- a/pkgs/applications/office/tryton/default.nix +++ b/pkgs/applications/office/tryton/default.nix @@ -1,5 +1,5 @@ { stdenv -, python2Packages +, python3Packages , pkgconfig , librsvg , gobject-introspection @@ -7,40 +7,59 @@ , gtk3 , gtkspell3 , gnome3 +, glib , goocanvas2 +, gdk-pixbuf +, pango +, fontconfig +, freetype +, wrapGAppsHook }: with stdenv.lib; -python2Packages.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { pname = "tryton"; - version = "4.8.5"; - src = python2Packages.fetchPypi { + version = "5.4.0"; + + disabled = !python3Packages.isPy3k; + + src = python3Packages.fetchPypi { inherit pname version; - sha256 = "43759d22b061a7a392a534d19a045fafd442ce98a0e390ee830127367dcaf4b4"; + sha256 = "0wbq8y8z0n6c5b3h5ynlawn3z79a3hkb1fkmblz4pwnj0jfnbswd"; }; - nativeBuildInputs = [ pkgconfig gobject-introspection ]; - propagatedBuildInputs = with python2Packages; [ - chardet + + nativeBuildInputs = [ + pkgconfig + gobject-introspection + wrapGAppsHook + ]; + + propagatedBuildInputs = with python3Packages; [ dateutil - pygtk - librsvg pygobject3 goocalendar - cdecimal + pycairo ]; + buildInputs = [ atk - gtk3 + gdk-pixbuf + glib gnome3.adwaita-icon-theme - gtkspell3 goocanvas2 + fontconfig + freetype + gtk3 + gtkspell3 + librsvg + pango ]; - makeWrapperArgs = [ - ''--set GDK_PIXBUF_MODULE_FILE "$GDK_PIXBUF_MODULE_FILE"'' - ''--set GI_TYPELIB_PATH "$GI_TYPELIB_PATH"'' - ''--suffix XDG_DATA_DIRS : "$XDG_ICON_DIRS:$GSETTINGS_SCHEMAS_PATH"'' - ]; + + strictDeps = false; + + doCheck = false; + meta = { description = "The client of the Tryton application platform"; longDescription = '' diff --git a/pkgs/applications/office/zim/default.nix b/pkgs/applications/office/zim/default.nix index 5afc03a3bd6..baf7741ed22 100644 --- a/pkgs/applications/office/zim/default.nix +++ b/pkgs/applications/office/zim/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python3Packages, gtk3, gobject-introspection, wrapGAppsHook }: +{ stdenv, fetchurl, python3Packages, gtk3, gobject-introspection, wrapGAppsHook, gnome3 }: # # TODO: Declare configuration options for the following optional dependencies: @@ -16,7 +16,7 @@ python3Packages.buildPythonApplication rec { sha256 = "1n3gmg7g86s8iwcx0i7rvvfdfs1fzmc9awr9qzjd2rckw4bkxad1"; }; - buildInputs = [ gtk3 gobject-introspection wrapGAppsHook ]; + buildInputs = [ gtk3 gobject-introspection wrapGAppsHook gnome3.adwaita-icon-theme ]; propagatedBuildInputs = with python3Packages; [ pyxdg pygobject3 ]; diff --git a/pkgs/applications/office/zotero/default.nix b/pkgs/applications/office/zotero/default.nix index a84d9c1b169..42c5488bd5e 100644 --- a/pkgs/applications/office/zotero/default.nix +++ b/pkgs/applications/office/zotero/default.nix @@ -35,11 +35,11 @@ stdenv.mkDerivation rec { pname = "zotero"; - version = "5.0.77"; + version = "5.0.80"; src = fetchurl { url = "https://download.zotero.org/client/release/${version}/Zotero-${version}_linux-x86_64.tar.bz2"; - sha256 = "1dgxzprpb8f5wpmvlvkxix0xxckfgjsi3wfcy9mb221a17cv0029"; + sha256 = "0a5xjliml6rwxvi450l42iw6m9mk3aahnp90sr22jyijz9qii2al"; }; buildInputs= [ wrapGAppsHook gsettings-desktop-schemas gtk3 gnome3.adwaita-icon-theme dconf ]; diff --git a/pkgs/applications/radio/chirp/default.nix b/pkgs/applications/radio/chirp/default.nix index c088cefd861..0c31a2006c7 100644 --- a/pkgs/applications/radio/chirp/default.nix +++ b/pkgs/applications/radio/chirp/default.nix @@ -1,31 +1,20 @@ -{ stdenv, fetchurl, libxml2Python, libxslt, makeWrapper -, pyserial, pygtk }: - -stdenv.mkDerivation rec { +{ stdenv +, fetchurl +, python2 +}: +python2.pkgs.buildPythonApplication rec { pname = "chirp-daily"; - version = "20190925"; + version = "20191123"; src = fetchurl { url = "https://trac.chirp.danplanet.com/chirp_daily/daily-${version}/${pname}-${version}.tar.gz"; - sha256 = "0immgss7nj7395r3csiypksnbn1r2f3j45c5v8qpybz65lpbplps"; + sha256 = "11wzk0c9fa3gp185gyd47g3sh7gfallw7qapr6qp913q2zfmif8v"; }; - nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ - pyserial pygtk libxml2Python libxslt + propagatedBuildInputs = with python2.pkgs; [ + pygtk pyserial libxml2 ]; - installPhase = '' - mkdir -p $out/bin $out/share/chirp - cp -r . $out/share/chirp/ - ln -s $out/share/chirp/chirpw $out/bin/chirpw - - for file in "$out"/bin/*; do - wrapProgram "$file" \ - --prefix PYTHONPATH : $PYTHONPATH:$(toPythonPath "$out") - done - ''; - meta = with stdenv.lib; { description = "A free, open-source tool for programming your amateur radio"; homepage = https://chirp.danplanet.com/; diff --git a/pkgs/applications/radio/welle-io/default.nix b/pkgs/applications/radio/welle-io/default.nix index 229200f2352..66a033fef25 100644 --- a/pkgs/applications/radio/welle-io/default.nix +++ b/pkgs/applications/radio/welle-io/default.nix @@ -3,7 +3,7 @@ , faad2, rtl-sdr, soapysdr-with-plugins, libusb, fftwSinglePrec, lame, mpg123 }: let - version = "2.0"; + version = "2.1"; in mkDerivation { @@ -14,7 +14,7 @@ in mkDerivation { owner = "AlbrechtL"; repo = "welle.io"; rev = "v${version}"; - sha256 = "0cp8dyswgwidabaj9bvkkc6hl3160096j6myckd5bw00zxnbfiqn"; + sha256 = "1j63gdbd66d6rfjsxwdm2agrcww1rs4438kg7313h6zixpcc1icj"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/applications/radio/wsjtx/default.nix b/pkgs/applications/radio/wsjtx/default.nix index 36d3f14818f..8e135dee568 100644 --- a/pkgs/applications/radio/wsjtx/default.nix +++ b/pkgs/applications/radio/wsjtx/default.nix @@ -4,12 +4,12 @@ stdenv.mkDerivation rec { pname = "wsjtx"; - version = "2.1.0"; + version = "2.1.2"; # This is a "superbuild" tarball containing both wsjtx and a hamlib fork src = fetchurl { url = "http://physics.princeton.edu/pulsar/k1jt/wsjtx-${version}.tgz"; - sha256 = "04flhyfw0djnnbrzh3f5lx06bnn92khchz3bmswk8if8n8j58v4y"; + sha256 = "0aj3wg5xjjqwjvw6lra171ag5wq86w0hf1ra4k8mnaf0mc1qgbyl"; }; # Hamlib builds with autotools, wsjtx builds with cmake diff --git a/pkgs/applications/science/astronomy/xplanet/default.nix b/pkgs/applications/science/astronomy/xplanet/default.nix index 5f02dc27a22..f306f9265ab 100644 --- a/pkgs/applications/science/astronomy/xplanet/default.nix +++ b/pkgs/applications/science/astronomy/xplanet/default.nix @@ -1,29 +1,38 @@ -{stdenv, fetchurl, pkgconfig, freetype, pango, libpng, libtiff, giflib -, libjpeg, netpbm}: +{stdenv, fetchurl, fetchpatch, pkgconfig, freetype, pango, libpng, libtiff +, giflib, libjpeg, netpbm}: stdenv.mkDerivation rec { - name = "xplanet-1.3.0"; + pname = "xplanet"; + version = "1.3.1"; src = fetchurl { - url = "mirror://sourceforge/xplanet/${name}.tar.gz"; - sha256 = "0hml2v228wi2r61m1pgka7h96rl92b6apk0iigm62miyp4mp9ys4"; + url = "mirror://sourceforge/xplanet/${pname}-${version}.tar.gz"; + sha256 = "1rzc1alph03j67lrr66499zl0wqndiipmj99nqgvh9xzm1qdb023"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ freetype pango libpng libtiff giflib libjpeg netpbm ]; patches = [ - ./giflib.patch - ./gcc6.patch + (fetchpatch { + name = "giflib6.patch"; + url = "https://git.archlinux.org/svntogit/community.git/plain/trunk/giflib6.patch?h=packages/xplanet&id=ce6f25eb369dc011161613894f01fd0a6ae85a09"; + sha256 = "173l0xkqq0v2bpaff7hhwc7y2aw5cclqw8988k1nalhyfbrjb8bl"; + }) + (fetchpatch { + name = "xplanet-c++11.patch"; + url = "https://git.archlinux.org/svntogit/community.git/plain/trunk/xplanet-c++11.patch?h=packages/xplanet&id=ce6f25eb369dc011161613894f01fd0a6ae85a09"; + sha256 = "0vldai78ixw49bxch774pps6pq4sp0p33qvkvxywcz7p8kzpg8q2"; + }) ]; NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.cc.isClang "-Wno-error=c++11-narrowing"; - meta = { + meta = with stdenv.lib; { description = "Renders an image of the earth or other planets into the X root window"; homepage = http://xplanet.sourceforge.net; - license = "GPL"; - maintainers = [ stdenv.lib.maintainers.sander ]; - platforms = stdenv.lib.platforms.all; + license = licenses.gpl2; + maintainers = with maintainers; [ lassulus sander ]; + platforms = platforms.all; }; } diff --git a/pkgs/applications/science/astronomy/xplanet/gcc6.patch b/pkgs/applications/science/astronomy/xplanet/gcc6.patch deleted file mode 100644 index b30385a50f8..00000000000 --- a/pkgs/applications/science/astronomy/xplanet/gcc6.patch +++ /dev/null @@ -1,128 +0,0 @@ -diff --git c/src/libannotate/addArcs.cpp i/src/libannotate/addArcs.cpp -index 2ee06c0..0ff5478 100644 ---- c/src/libannotate/addArcs.cpp -+++ i/src/libannotate/addArcs.cpp -@@ -258,7 +258,7 @@ addArcs(PlanetProperties *planetProperties, Planet *planet, - { - ifstream inFile(arcFile.c_str()); - char *line = new char[MAX_LINE_LENGTH]; -- while (inFile.getline (line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline (line, MAX_LINE_LENGTH, '\n')) - readArcFile(line, planet, view, projection, - planetProperties, annotationMap); - -@@ -292,7 +292,7 @@ addArcs(View *view, multimap<double, Annotation *> &annotationMap) - { - ifstream inFile(arcFile.c_str()); - char *line = new char[256]; -- while (inFile.getline (line, 256, '\n') != NULL) -+ while (inFile.getline (line, 256, '\n')) - readArcFile(line, NULL, view, NULL, NULL, annotationMap); - - inFile.close(); -diff --git c/src/libannotate/addMarkers.cpp i/src/libannotate/addMarkers.cpp -index 6a8a835..b35d820 100644 ---- c/src/libannotate/addMarkers.cpp -+++ i/src/libannotate/addMarkers.cpp -@@ -423,7 +423,7 @@ addMarkers(PlanetProperties *planetProperties, Planet *planet, - { - ifstream inFile(markerFile.c_str()); - char *line = new char[MAX_LINE_LENGTH]; -- while (inFile.getline (line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline (line, MAX_LINE_LENGTH, '\n')) - { - unsigned char color[3]; - memcpy(color, planetProperties->MarkerColor(), 3); -@@ -469,7 +469,7 @@ addMarkers(View *view, const int width, const int height, - { - ifstream inFile(markerFile.c_str()); - char *line = new char[MAX_LINE_LENGTH]; -- while (inFile.getline (line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline (line, MAX_LINE_LENGTH, '\n')) - { - unsigned char color[3]; - memcpy(color, options->Color(), 3); -diff --git c/src/libannotate/addSatellites.cpp i/src/libannotate/addSatellites.cpp -index 2634339..c9ff0b0 100644 ---- c/src/libannotate/addSatellites.cpp -+++ i/src/libannotate/addSatellites.cpp -@@ -488,10 +488,10 @@ loadSatelliteVector(PlanetProperties *planetProperties) - { - ifstream inFile(tleFile.c_str()); - char lines[3][80]; -- while (inFile.getline(lines[0], 80) != NULL) -+ while (inFile.getline(lines[0], 80)) - { -- if ((inFile.getline(lines[1], 80) == NULL) -- || (inFile.getline(lines[2], 80) == NULL)) -+ if ((inFile.getline(lines[1], 80)) -+ || (inFile.getline(lines[2], 80))) - { - ostringstream errStr; - errStr << "Malformed TLE file (" << tleFile << ")?\n"; -@@ -542,7 +542,7 @@ addSatellites(PlanetProperties *planetProperties, Planet *planet, - { - ifstream inFile(satFile.c_str()); - char *line = new char[MAX_LINE_LENGTH]; -- while (inFile.getline (line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline (line, MAX_LINE_LENGTH, '\n')) - readSatelliteFile(line, planet, view, projection, - planetProperties, annotationMap); - -diff --git c/src/libmultiple/RayleighScattering.cpp i/src/libmultiple/RayleighScattering.cpp -index d885173..7c25c1c 100644 ---- c/src/libmultiple/RayleighScattering.cpp -+++ i/src/libmultiple/RayleighScattering.cpp -@@ -369,7 +369,7 @@ RayleighScattering::readConfigFile(string configFile) - - diskTemplate_.clear(); - limbTemplate_.clear(); -- while (inFile.getline(line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline(line, MAX_LINE_LENGTH, '\n')) - { - int i = 0; - while (isDelimiter(line[i])) -@@ -439,7 +439,7 @@ RayleighScattering::readBlock(ifstream &inFile, - values.clear(); - - char line[MAX_LINE_LENGTH]; -- while (inFile.getline(line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline(line, MAX_LINE_LENGTH, '\n')) - { - int i = 0; - while (isDelimiter(line[i])) -@@ -470,7 +470,7 @@ RayleighScattering::readValue(ifstream &inFile, - double &value) - { - char line[MAX_LINE_LENGTH]; -- while (inFile.getline(line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline(line, MAX_LINE_LENGTH, '\n')) - { - int i = 0; - while (isDelimiter(line[i])) -diff --git c/src/libmultiple/drawStars.cpp i/src/libmultiple/drawStars.cpp -index ff07c49..22e41a0 100644 ---- c/src/libmultiple/drawStars.cpp -+++ i/src/libmultiple/drawStars.cpp -@@ -41,7 +41,7 @@ drawStars(DisplayBase *display, View *view) - ifstream inFile(starMap.c_str()); - - char line[MAX_LINE_LENGTH]; -- while (inFile.getline(line, MAX_LINE_LENGTH, '\n') != NULL) -+ while (inFile.getline(line, MAX_LINE_LENGTH, '\n')) - { - if (line[0] == '#') continue; - -diff --git c/src/readConfig.cpp i/src/readConfig.cpp -index cc1964f..2946690 100644 ---- c/src/readConfig.cpp -+++ i/src/readConfig.cpp -@@ -550,7 +550,7 @@ readConfigFile(string configFile, PlanetProperties *planetProperties[]) - - ifstream inFile(configFile.c_str()); - char *line = new char[256]; -- while (inFile.getline(line, 256, '\n') != NULL) -+ while (inFile.getline(line, 256, '\n')) - readConfig(line, planetProperties); - - // This condition will only be true if [default] is the only diff --git a/pkgs/applications/science/astronomy/xplanet/giflib.patch b/pkgs/applications/science/astronomy/xplanet/giflib.patch deleted file mode 100644 index 653b9c8dc7d..00000000000 --- a/pkgs/applications/science/astronomy/xplanet/giflib.patch +++ /dev/null @@ -1,141 +0,0 @@ -diff -wbBur xplanet-1.3.0/src/libimage/gif.c xplanet-1.3.0.my/src/libimage/gif.c ---- xplanet-1.3.0/src/libimage/gif.c 2006-03-26 01:50:51.000000000 +0300 -+++ xplanet-1.3.0.my/src/libimage/gif.c 2014-05-29 18:59:14.830652716 +0400 -@@ -20,7 +20,7 @@ - - #include <stdio.h> - #include <stdlib.h> -- -+#define FALSE 0 - #include <gif_lib.h> - - /* -@@ -42,11 +42,11 @@ - int color_index; - unsigned char *ptr = NULL; - -- infile = DGifOpenFileName(filename); -+ infile = DGifOpenFileName(filename, NULL); - - if (infile == NULL) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - -@@ -54,7 +54,7 @@ - { - if (DGifGetRecordType(infile, &record_type) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - -@@ -63,7 +63,7 @@ - case IMAGE_DESC_RECORD_TYPE: - if (DGifGetImageDesc(infile) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - -@@ -107,14 +107,14 @@ - GifByteType *ext; - if (DGifGetExtension(infile, &ext_code, &ext) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - while (ext != NULL) - { - if (DGifGetExtensionNext(infile, &ext) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - } -@@ -154,7 +154,7 @@ - - free(buffer); - -- DGifCloseFile(infile); -+ DGifCloseFile(infile, NULL); - return(1); - } - -@@ -178,7 +178,7 @@ - return(0); - } - -- colormap = MakeMapObject(colormap_size, NULL); -+ colormap = GifMakeMapObject(colormap_size, NULL); - - for (i = 0; i < width * height; i++) - { -@@ -187,10 +187,10 @@ - blue[i] = (GifByteType) rgb[3*i+2]; - } - -- if (QuantizeBuffer(width, height, &colormap_size, red, green, blue, -+ if (GifQuantizeBuffer(width, height, &colormap_size, red, green, blue, - buffer, colormap->Colors) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - -@@ -198,24 +198,24 @@ - free(green); - free(blue); - -- outfile = EGifOpenFileName((char *) filename, FALSE); -+ outfile = EGifOpenFileName((char *) filename, FALSE, NULL); - if (outfile == NULL) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - - if (EGifPutScreenDesc(outfile, width, height, colormap_size, 0, colormap) - == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - - if (EGifPutImageDesc(outfile, 0, 0, width, height, FALSE, NULL) - == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - -@@ -224,7 +224,7 @@ - { - if (EGifPutLine(outfile, ptr, width) == GIF_ERROR) - { -- PrintGifError(); -+ printf("%s\n", GifErrorString(GIF_ERROR)); - return(0); - } - ptr += width; -@@ -232,8 +232,8 @@ - - EGifSpew(outfile); - -- if (EGifCloseFile(outfile) == GIF_ERROR) -- PrintGifError(); -+ if (EGifCloseFile(outfile, NULL) == GIF_ERROR) -+ printf("%s\n", GifErrorString(GIF_ERROR)); - - free(buffer); - diff --git a/pkgs/applications/science/biology/bedtools/default.nix b/pkgs/applications/science/biology/bedtools/default.nix index 4e4c093ad7f..9af2ec88c39 100644 --- a/pkgs/applications/science/biology/bedtools/default.nix +++ b/pkgs/applications/science/biology/bedtools/default.nix @@ -2,19 +2,20 @@ stdenv.mkDerivation rec { pname = "bedtools"; - version = "2.29.0"; + version = "2.29.2"; src = fetchFromGitHub { owner = "arq5x"; repo = "bedtools2"; rev = "v${version}"; - sha256 = "0d6i985qqxp92ddq4n6558m70qi5rqhl724wrfys0hm0p6a9h56x"; + sha256 = "015qq3pwrwgnyxyi959niijjlswl231b3wxlsm3l8msv6fdhmkz8"; }; buildInputs = [ zlib python bzip2 lzma ]; - cc = if stdenv.cc.isClang then "clang++" else "g++"; - buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cc} -j $NIX_BUILD_CORES"; - installPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cc} install"; + cxx = if stdenv.cc.isClang then "clang++" else "g++"; + cc = if stdenv.cc.isClang then "clang" else "gcc"; + buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} -j $NIX_BUILD_CORES"; + installPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} install"; meta = with stdenv.lib; { description = "A powerful toolset for genome arithmetic."; diff --git a/pkgs/applications/science/biology/bftools/default.nix b/pkgs/applications/science/biology/bftools/default.nix index 15829104934..29e8bca5262 100644 --- a/pkgs/applications/science/biology/bftools/default.nix +++ b/pkgs/applications/science/biology/bftools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "bftools"; - version = "5.9.2"; + version = "6.3.0"; src = fetchzip { url = "http://downloads.openmicroscopy.org/bio-formats/${version}/artifacts/bftools.zip"; - sha256 = "08lmbg3kfxh17q6548il0i2h3f9a6ch8r0r067p14dajhzfpjyqj"; + sha256 = "02nvvmpfglpah1ihd08aw65g1794w588c988cdar1hfl4s80qwhb"; }; installPhase = '' diff --git a/pkgs/applications/science/biology/kssd/default.nix b/pkgs/applications/science/biology/kssd/default.nix new file mode 100644 index 00000000000..ef8a0ce136f --- /dev/null +++ b/pkgs/applications/science/biology/kssd/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchurl, zlib, automake, autoconf, libtool }: + +stdenv.mkDerivation rec { + pname = "kssd"; + version = "1.0"; + + src = fetchurl { + url = "https://github.com/yhg926/public_${pname}/archive/v${version}.tar.gz"; + sha256 = "a5dcaf520049a962bef625cb59a567ea2b4252d4dc9be28dd06123d340e03919"; + }; + + buildInputs = [ zlib automake autoconf libtool ]; + + installPhase = '' + install -vD kssd $out/bin/kssd + ''; + + meta = with stdenv.lib; { + description = "K-mer substring space decomposition"; + license = licenses.asl20; + homepage = "https://github.com/yhg926/public_kssd"; + maintainers = with maintainers; [ unode ]; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/pkgs/applications/science/biology/strelka/default.nix b/pkgs/applications/science/biology/strelka/default.nix index c791e8ef89b..cb83b19269b 100644 --- a/pkgs/applications/science/biology/strelka/default.nix +++ b/pkgs/applications/science/biology/strelka/default.nix @@ -14,6 +14,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ zlib python2 ]; + NIX_CFLAGS_COMPILE = [ "-Wno-error=maybe-uninitialized" ]; + preConfigure = '' sed -i 's|/usr/bin/env python|${python2}/bin/python|' src/python/lib/makeRunScript.py patchShebangs . @@ -33,7 +35,6 @@ stdenv.mkDerivation rec { homepage = https://github.com/Illumina/strelka; maintainers = with maintainers; [ jbedo ]; platforms = [ "x86_64-linux" ]; - broken = true; }; } diff --git a/pkgs/applications/science/biology/svaba/default.nix b/pkgs/applications/science/biology/svaba/default.nix new file mode 100644 index 00000000000..ae8dc95d6fe --- /dev/null +++ b/pkgs/applications/science/biology/svaba/default.nix @@ -0,0 +1,42 @@ +{ stdenv, zlib, bzip2, lzma, fetchFromGitHub } : + +stdenv.mkDerivation rec { + version = "1.1.0"; + pname = "svaba"; + + src = fetchFromGitHub { + owner = "walaj"; + repo = pname; + rev = version; + sha256 = "1vv5mc9z5d22kgdy7mm27ya5aahnqgkcrskdr2405058ikk9g8kp"; + fetchSubmodules = true; + }; + + buildInputs = [ zlib bzip2 lzma ]; + + installPhase = '' + runHook preInstall + install -Dm555 src/svaba/svaba $out/bin/svaba + runHook postInstall + ''; + + meta = with stdenv.lib; { + description = "Structural variant and INDEL caller for DNA sequencing data, using genome-wide local assembly"; + license = licenses.gpl3; + homepage = "https://github.com/walaj/svaba"; + maintainers = with maintainers; [ scalavision ]; + platforms = platforms.linux; + longDescription = '' + SvABA is a method for detecting structural variants in sequencing data + using genome-wide local assembly. Under the hood, SvABA uses a custom + implementation of SGA (String Graph Assembler) by Jared Simpson, + and BWA-MEM by Heng Li. Contigs are assembled for every 25kb window + (with some small overlap) for every region in the genome. + The default is to use only clipped, discordant, unmapped and indel reads, + although this can be customized to any set of reads at the command line using VariantBam rules. + These contigs are then immediately aligned to the reference with BWA-MEM and parsed to identify variants. + Sequencing reads are then realigned to the contigs with BWA-MEM, and variants are scored by their read support. + ''; + + }; +} diff --git a/pkgs/applications/science/chemistry/jmol/default.nix b/pkgs/applications/science/chemistry/jmol/default.nix index e32900ed720..3ec127e7e06 100644 --- a/pkgs/applications/science/chemistry/jmol/default.nix +++ b/pkgs/applications/science/chemistry/jmol/default.nix @@ -17,14 +17,14 @@ let }; in stdenv.mkDerivation rec { - version = "14.29.55"; + version = "14.30.0"; pname = "jmol"; src = let baseVersion = "${lib.versions.major version}.${lib.versions.minor version}"; in fetchurl { url = "mirror://sourceforge/jmol/Jmol/Version%20${baseVersion}/Jmol%20${version}/Jmol-${version}-binary.tar.gz"; - sha256 = "1w841yyck5j97p72q3iq0by0sixiyh3rzscbfcx21gv2dj45vq46"; + sha256 = "0g0pykdp9xgvc485c89lwajy5wgrz66w1n6pqan1v1i4zfbz9vna"; }; patchPhase = '' diff --git a/pkgs/applications/science/chemistry/marvin/default.nix b/pkgs/applications/science/chemistry/marvin/default.nix index 391ed54dfcb..8b7da71c80f 100644 --- a/pkgs/applications/science/chemistry/marvin/default.nix +++ b/pkgs/applications/science/chemistry/marvin/default.nix @@ -4,12 +4,12 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "marvin"; - version = "19.1.0"; + version = "19.23.0"; src = fetchurl { name = "marvin-${version}.deb"; url = "http://dl.chemaxon.com/marvin/${version}/marvin_linux_${versions.majorMinor version}.deb"; - sha256 = "1ccsimfvms5q4prjyk6sg5hsc3hkcjjfq3gl7jjm8dgd2173zzyc"; + sha256 = "1m28jki2qan6gdzs544y1v72ybp4vyj66ri5sy44jqi94xg1mb5f"; }; nativeBuildInputs = [ dpkg makeWrapper ]; diff --git a/pkgs/applications/science/electronics/eagle/eagle.nix b/pkgs/applications/science/electronics/eagle/eagle.nix index 7cc71e4978a..db4c1e42fea 100644 --- a/pkgs/applications/science/electronics/eagle/eagle.nix +++ b/pkgs/applications/science/electronics/eagle/eagle.nix @@ -13,11 +13,11 @@ let in mkDerivation rec { pname = "eagle"; - version = "9.5.0"; + version = "9.5.1"; src = fetchurl { url = "https://eagle-updates.circuits.io/downloads/${builtins.replaceStrings ["."] ["_"] version}/Autodesk_EAGLE_${version}_English_Linux_64bit.tar.gz"; - sha256 = "0wakaja98mkdgcxp18d7499i0254ns1xhnx4bag2lqi7j8qn8rqy"; + sha256 = "07lvjn0mxqkv5kx41bzakifpb5bjhljx0ssvk33ipzb0nvl6nx63"; }; desktopItem = makeDesktopItem { diff --git a/pkgs/applications/science/electronics/gtkwave/default.nix b/pkgs/applications/science/electronics/gtkwave/default.nix index 9b52e8c5051..75d69d3e499 100644 --- a/pkgs/applications/science/electronics/gtkwave/default.nix +++ b/pkgs/applications/science/electronics/gtkwave/default.nix @@ -1,18 +1,23 @@ -{stdenv, fetchurl, gtk2, gperf, pkgconfig, bzip2, tcl, tk, judy, xz}: +{ stdenv, fetchurl, glib, gtk3, gperf, pkgconfig, bzip2, tcl, tk, wrapGAppsHook, judy, xz }: stdenv.mkDerivation rec { pname = "gtkwave"; version = "3.3.103"; src = fetchurl { - url = "mirror://sourceforge/gtkwave/${pname}-${version}.tar.gz"; - sha256 = "1xzaxqbabj4sb4n10yki5acglx3736pwl3kwlq4k7i96rzvsn9f3"; + url = "mirror://sourceforge/gtkwave/${pname}-gtk3-${version}.tar.gz"; + sha256 = "0djqfnxy772a9p44wnm5ansbih7jg76xv1hvcpkv3gblhkzg49ay"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk2 gperf bzip2 tcl tk judy xz ]; + nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; + buildInputs = [ glib gtk3 gperf bzip2 tcl tk judy xz ]; - configureFlags = [ "--with-tcl=${tcl}/lib" "--with-tk=${tk}/lib" "--enable-judy" ]; + configureFlags = [ + "--with-tcl=${tcl}/lib" + "--with-tk=${tk}/lib" + "--enable-judy" + "--enable-gtk3" + ]; meta = { description = "VCD/Waveform viewer for Unix and Win32"; diff --git a/pkgs/applications/science/logic/aiger/default.nix b/pkgs/applications/science/logic/aiger/default.nix index 10d94e2bb8c..0f65c9b7eae 100644 --- a/pkgs/applications/science/logic/aiger/default.nix +++ b/pkgs/applications/science/logic/aiger/default.nix @@ -50,6 +50,6 @@ stdenv.mkDerivation rec { homepage = http://fmv.jku.at/aiger/; license = stdenv.lib.licenses.mit; maintainers = with stdenv.lib.maintainers; [ thoughtpolice ]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/applications/science/logic/boolector/default.nix b/pkgs/applications/science/logic/boolector/default.nix index f1f74bcb581..4cf0b0f1ea1 100644 --- a/pkgs/applications/science/logic/boolector/default.nix +++ b/pkgs/applications/science/logic/boolector/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub +{ stdenv, fetchFromGitHub, fetchpatch , cmake, lingeling, btor2tools }: @@ -13,6 +13,14 @@ stdenv.mkDerivation rec { sha256 = "15i3ni5klss423m57wcy1gx0m5wfrjmglapwg85pm7fb3jj1y7sz"; }; + patches = [ + (fetchpatch { + name = "CVE-2019-7560.patch"; + url = "https://github.com/Boolector/boolector/commit/8d979d02e0482c7137c9f3a34e6d430dbfd1f5c5.patch"; + sha256 = "1a1g02mk8b0azzjcigdn5zpshn0dn05fciwi8sd5q38yxvnvpbbi"; + }) + ]; + nativeBuildInputs = [ cmake ]; buildInputs = [ lingeling btor2tools ]; diff --git a/pkgs/applications/science/logic/btor2tools/default.nix b/pkgs/applications/science/logic/btor2tools/default.nix index 2d00e9f3046..2aedfb1d07e 100644 --- a/pkgs/applications/science/logic/btor2tools/default.nix +++ b/pkgs/applications/science/logic/btor2tools/default.nix @@ -24,8 +24,8 @@ stdenv.mkDerivation { outputs = [ "out" "dev" "lib" ]; meta = with stdenv.lib; { - description = "Fast SAT solver"; - homepage = http://fmv.jku.at/lingeling/; + description = "A generic parser and tool package for the BTOR2 format"; + homepage = "https://github.com/Boolector/btor2tools"; license = licenses.mit; platforms = platforms.linux; maintainers = with maintainers; [ thoughtpolice ]; diff --git a/pkgs/applications/science/logic/coq/default.nix b/pkgs/applications/science/logic/coq/default.nix index e5958f46cbf..2378cb9408e 100644 --- a/pkgs/applications/science/logic/coq/default.nix +++ b/pkgs/applications/science/logic/coq/default.nix @@ -32,6 +32,7 @@ let "8.10.0" = "138jw94wp4mg5dgjc2asn8ng09ayz1mxdznq342n0m469j803gzg"; "8.10.1" = "072v2zkjzf7gj48137wpr3c9j0hg9pdhlr5l8jrgrwynld8fp7i4"; "8.10.2" = "0znxmpy71bfw0p6x47i82jf5k7v41zbz9bdpn901ysn3ir8l3wrz"; + "8.11+beta1" = "06dlxj6v7gd51dh6ir121z7lgqdagkq717xxxrc8bdqhz7d2z7qj"; }.${version}; coq-version = stdenv.lib.versions.majorMinor version; versionAtLeast = stdenv.lib.versionAtLeast coq-version; diff --git a/pkgs/applications/science/logic/lingeling/default.nix b/pkgs/applications/science/logic/lingeling/default.nix index 287dbd36eab..94be89d4736 100644 --- a/pkgs/applications/science/logic/lingeling/default.nix +++ b/pkgs/applications/science/logic/lingeling/default.nix @@ -43,7 +43,7 @@ stdenv.mkDerivation { description = "Fast SAT solver"; homepage = http://fmv.jku.at/lingeling/; license = licenses.mit; - platforms = platforms.linux; + platforms = platforms.unix; maintainers = with maintainers; [ thoughtpolice ]; }; } diff --git a/pkgs/applications/science/logic/z3/default.nix b/pkgs/applications/science/logic/z3/default.nix index 14f75fb68b5..170a56b95b9 100644 --- a/pkgs/applications/science/logic/z3/default.nix +++ b/pkgs/applications/science/logic/z3/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "z3"; - version = "4.8.5"; + version = "4.8.7"; src = fetchFromGitHub { owner = "Z3Prover"; repo = pname; - rev = "Z3-${version}"; - sha256 = "11sy98clv7ln0a5vqxzvh6wwqbswsjbik2084hav5kfws4xvklfa"; + rev = "z3-${version}"; + sha256 = "0hprcdwhhyjigmhhk6514m71bnmvqci9r8gglrqilgx424r6ff7q"; }; buildInputs = [ python fixDarwinDylibNames ]; diff --git a/pkgs/applications/science/math/R/default.nix b/pkgs/applications/science/math/R/default.nix index a66cd3e8d7e..517fc9d7b32 100644 --- a/pkgs/applications/science/math/R/default.nix +++ b/pkgs/applications/science/math/R/default.nix @@ -11,11 +11,11 @@ }: stdenv.mkDerivation rec { - name = "R-3.6.1"; + name = "R-3.6.2"; src = fetchurl { url = "https://cran.r-project.org/src/base/R-3/${name}.tar.gz"; - sha256 = "128kifbq0w25y8aq77w289ddax5i5w2djcfsqgffrb3i7syrxajv"; + sha256 = "0m69pfi0nxyriyb2yz74xfzaxwfkinnf9kpvf1rz727vvmfa8rdx"; }; dontUseImakeConfigure = true; diff --git a/pkgs/applications/science/math/geogebra/default.nix b/pkgs/applications/science/math/geogebra/default.nix index 0ab4c169944..75c49591675 100644 --- a/pkgs/applications/science/math/geogebra/default.nix +++ b/pkgs/applications/science/math/geogebra/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "geogebra"; - version = "5-0-560-0"; + version = "5-0-569-0"; preferLocalBuild = true; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { "https://download.geogebra.org/installers/5.0/GeoGebra-Linux-Portable-${version}.tar.bz2" "http://web.archive.org/https://download.geogebra.org/installers/5.0/GeoGebra-Linux-Portable-${version}.tar.bz2" ]; - sha256 = "16w6z3axzb9g51w4cbyf5zj6gpm9qab65xbw1184v5wym5llf4iw"; + sha256 = "16bav6hf80l21gnhdjll82hpjqi7kr3w74jcq7mnf24acmcn70qm"; }; srcIcon = fetchurl { diff --git a/pkgs/applications/science/math/giac/default.nix b/pkgs/applications/science/math/giac/default.nix index 862761fe6fb..b3777528ecd 100644 --- a/pkgs/applications/science/math/giac/default.nix +++ b/pkgs/applications/science/math/giac/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fetchpatch, texlive, bison, flex, liblapack +{ stdenv, lib, fetchurl, fetchpatch, texlive, bison, flex, liblapack , gmp, mpfr, pari, ntl, gsl, blas, mpfi, ecm, glpk, nauty , readline, gettext, libpng, libao, gfortran, perl , enableGUI ? false, libGL ? null, libGLU ? null, xorg ? null, fltk ? null @@ -7,8 +7,7 @@ assert enableGUI -> libGLU != null && libGL != null && xorg != null && fltk != null; stdenv.mkDerivation rec { - name = "${attr}-${version}"; - attr = if enableGUI then "giac-with-xcas" else "giac"; + pname = "giac${lib.optionalString enableGUI "-with-xcas"}"; version = "1.5.0-21"; # TODO try to remove preCheck phase on upgrade src = fetchurl { @@ -104,7 +103,7 @@ stdenv.mkDerivation rec { description = "A free computer algebra system (CAS)"; homepage = "https://www-fourier.ujf-grenoble.fr/~parisse/giac.html"; license = licenses.gpl3Plus; - platforms = platforms.unix; + platforms = platforms.linux ++ (optionals (!enableGUI) platforms.darwin); maintainers = [ maintainers.symphorien ]; }; } diff --git a/pkgs/applications/science/math/qalculate-gtk/default.nix b/pkgs/applications/science/math/qalculate-gtk/default.nix index fccd83aa86f..0a300a15d01 100644 --- a/pkgs/applications/science/math/qalculate-gtk/default.nix +++ b/pkgs/applications/science/math/qalculate-gtk/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "qalculate-gtk"; - version = "3.5.0"; + version = "3.6.0"; src = fetchFromGitHub { owner = "qalculate"; repo = "qalculate-gtk"; rev = "v${version}"; - sha256 = "0vknp52zyp2c4pxr12pryflyin1hl2dwhkrn5y0r4qh4ndf3ms1m"; + sha256 = "1b20sjkv853lqii0dpqg10rgcka3cs57zriihyd463n7dq3hsim5"; }; patchPhase = '' diff --git a/pkgs/applications/science/math/sage/pybrial.nix b/pkgs/applications/science/math/sage/pybrial.nix index 092a340bb5b..718414126ae 100644 --- a/pkgs/applications/science/math/sage/pybrial.nix +++ b/pkgs/applications/science/math/sage/pybrial.nix @@ -1,6 +1,7 @@ { stdenv , fetchFromGitHub , buildPythonPackage +, brial }: # This has a cyclic dependency with sage. I don't include sage in the # buildInputs and let python figure it out at runtime. Because of this, @@ -9,15 +10,10 @@ # it). buildPythonPackage rec { pname = "pyBRiAl"; - version = "1.2.3"; + version = brial.version; # included with BRiAl source - src = fetchFromGitHub { - owner = "BRiAl"; - repo = "BRiAl"; - rev = version; - sha256 = "0qy4cwy7qrk4zg151cmws5cglaa866z461cnj9wdnalabs7v7qbg"; - }; + src = brial.src; sourceRoot = "source/sage-brial"; diff --git a/pkgs/applications/science/misc/netlogo/default.nix b/pkgs/applications/science/misc/netlogo/default.nix index b412c4ef81a..9b0279bd4d0 100644 --- a/pkgs/applications/science/misc/netlogo/default.nix +++ b/pkgs/applications/science/misc/netlogo/default.nix @@ -15,11 +15,11 @@ in stdenv.mkDerivation rec { pname = "netlogo"; - version = "6.0.4"; + version = "6.1.1"; src = fetchurl { url = "https://ccl.northwestern.edu/netlogo/${version}/NetLogo-${version}-64.tgz"; - sha256 = "0dcd9df4dfb218826a74f9df42163fa588908a1dfe58864106936f8dfb76acec"; + sha256 = "1j08df68pgggxqkmpzd369w4h97q0pivmmljdb48hjghx7hacblp"; }; src1 = fetchurl { diff --git a/pkgs/applications/science/misc/root/default.nix b/pkgs/applications/science/misc/root/default.nix index ada2f0b44ad..7a03369febe 100644 --- a/pkgs/applications/science/misc/root/default.nix +++ b/pkgs/applications/science/misc/root/default.nix @@ -1,27 +1,32 @@ -{ stdenv, fetchurl, cmake, pcre, pkgconfig, python2 -, libX11, libXpm, libXft, libXext, libGLU, libGL, zlib, libxml2, lz4, lzma, gsl, xxHash +{ stdenv, fetchurl, cmake, gl2ps, gsl, libX11, libXpm, libXft, libXext +, libGLU, libGL, libxml2, lz4, lzma, pcre, pkgconfig, python, xxHash, zlib , Cocoa, OpenGL, noSplash ? false }: stdenv.mkDerivation rec { pname = "root"; - version = "6.12.06"; + version = "6.18.04"; src = fetchurl { url = "https://root.cern.ch/download/root_v${version}.source.tar.gz"; - sha256 = "1557b9sdragsx9i15qh6lq7fn056bgi87d31kxdl4vl0awigvp5f"; + sha256 = "196ghma6g5a7sqz52wyjkgvmh4hj4vqwppm0zwdypy33hgy8anii"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ cmake pcre python2 zlib libxml2 lz4 lzma gsl xxHash ] + nativeBuildInputs = [ cmake pkgconfig ]; + buildInputs = [ gl2ps pcre python zlib libxml2 lz4 lzma gsl xxHash ] ++ stdenv.lib.optionals (!stdenv.isDarwin) [ libX11 libXpm libXft libXext libGLU libGL ] ++ stdenv.lib.optionals (stdenv.isDarwin) [ Cocoa OpenGL ] ; + propagatedBuildInputs = [ python.pkgs.numpy ]; patches = [ ./sw_vers.patch ]; preConfigure = '' + rm -rf builtins/* + substituteInPlace cmake/modules/SearchInstalledSoftware.cmake \ + --replace 'set(lcgpackages ' '#set(lcgpackages ' + patchShebangs build/unix/ '' + stdenv.lib.optionalString noSplash '' substituteInPlace rootx/src/rootx.cxx --replace "gNoLogo = false" "gNoLogo = true" @@ -35,8 +40,10 @@ stdenv.mkDerivation rec { "-Dbonjour=OFF" "-Dcastor=OFF" "-Dchirp=OFF" + "-Dclad=OFF" "-Ddavix=OFF" "-Ddcache=OFF" + "-Dfail-on-missing=ON" "-Dfftw3=OFF" "-Dfitsio=OFF" "-Dfortran=OFF" @@ -57,6 +64,7 @@ stdenv.mkDerivation rec { "-Drfio=OFF" "-Dsqlite=OFF" "-Dssl=OFF" + "-Dvdt=OFF" "-Dxml=ON" "-Dxrootd=OFF" ] diff --git a/pkgs/applications/science/misc/root/sw_vers.patch b/pkgs/applications/science/misc/root/sw_vers.patch index df0ef79d0a0..34af132c11f 100644 --- a/pkgs/applications/science/misc/root/sw_vers.patch +++ b/pkgs/applications/science/misc/root/sw_vers.patch @@ -1,54 +1,46 @@ -diff --git a/build/unix/compiledata.sh b/build/unix/compiledata.sh +diff a/build/unix/compiledata.sh b/build/unix/compiledata.sh --- a/build/unix/compiledata.sh +++ b/build/unix/compiledata.sh -@@ -49,7 +49,7 @@ fi +@@ -47,7 +47,7 @@ fi if [ "$ARCH" = "macosx" ] || [ "$ARCH" = "macosx64" ] || \ [ "$ARCH" = "macosxicc" ]; then - macosx_minor=`sw_vers | sed -n 's/ProductVersion://p' | cut -d . -f 2` -+ macosx_minor=7 ++ macosx_minor=12 SOEXT="so" if [ $macosx_minor -ge 5 ]; then if [ "x`echo $SOFLAGS | grep -- '-install_name'`" != "x" ]; then -diff --git a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake +diff a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake --- a/cmake/modules/SetUpMacOS.cmake +++ b/cmake/modules/SetUpMacOS.cmake -@@ -12,25 +12,11 @@ set(CMAKE_PREFIX_PATH ${CMAKE_PREFIX_PATH} /usr/X11R6) - #--------------------------------------------------------------------------------------------------------- +@@ -2,17 +2,8 @@ set(ROOT_ARCHITECTURE macosx) + set(ROOT_PLATFORM macosx) if (CMAKE_SYSTEM_NAME MATCHES Darwin) - EXECUTE_PROCESS(COMMAND sw_vers "-productVersion" - COMMAND cut -d . -f 1-2 - OUTPUT_VARIABLE MACOSX_VERSION OUTPUT_STRIP_TRAILING_WHITESPACE) +- - MESSAGE(STATUS "Found a Mac OS X System ${MACOSX_VERSION}") -- EXECUTE_PROCESS(COMMAND sw_vers "-productVersion" -- COMMAND cut -d . -f 2 -- OUTPUT_VARIABLE MACOSX_MINOR OUTPUT_STRIP_TRAILING_WHITESPACE) - - if(MACOSX_VERSION VERSION_GREATER 10.7 AND ${CMAKE_CXX_COMPILER_ID} MATCHES Clang) set(libcxx ON CACHE BOOL "Build using libc++" FORCE) - endif() -- if(${MACOSX_MINOR} GREATER 4) +- if(MACOSX_VERSION VERSION_GREATER 10.4) #TODO: check haveconfig and rpath -> set rpath true #TODO: check Thread, define link command #TODO: more stuff check configure script -- execute_process(COMMAND /usr/sbin/sysctl machdep.cpu.extfeatures OUTPUT_VARIABLE SYSCTL_OUTPUT) -- if(${SYSCTL_OUTPUT} MATCHES 64) -- MESSAGE(STATUS "Found a 64bit system") - set(ROOT_ARCHITECTURE macosx64) - SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS}") - SET(CMAKE_SHARED_LIBRARY_CREATE_C_FLAGS "${CMAKE_SHARED_LIBRARY_CREATE_C_FLAGS} -m64") -@@ -38,27 +24,6 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) +@@ -25,23 +16,7 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m64") SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -m64") SET(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -m64") -- else(${SYSCTL_OUTPUT} MATCHES 64) +- else() - MESSAGE(STATUS "Found a 32bit system") - SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m32") - SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -m32") - SET(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -m32") -- endif(${SYSCTL_OUTPUT} MATCHES 64) +- endif() - endif() - - if(MACOSX_VERSION VERSION_GREATER 10.6) @@ -59,32 +51,51 @@ diff --git a/cmake/modules/SetUpMacOS.cmake b/cmake/modules/SetUpMacOS.cmake - endif() - if(MACOSX_VERSION VERSION_GREATER 10.8) - set(MACOSX_GLU_DEPRECATED ON) -- set(MACOSX_KRB5_DEPRECATED ON) -- endif() -- if(MACOSX_VERSION VERSION_GREATER 10.9) -- set(MACOSX_LDAP_DEPRECATED ON) - endif() ++ endif() if (CMAKE_COMPILER_IS_GNUCXX) message(STATUS "Found GNU compiler collection") -@@ -135,7 +100,7 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) +@@ -104,7 +79,6 @@ if (CMAKE_SYSTEM_NAME MATCHES Darwin) endif() #---Set Linker flags---------------------------------------------------------------------- -- set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -mmacosx-version-min=${MACOSX_VERSION} -Wl,-rpath,@loader_path/../lib") -+ set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -Wl,-rpath,@loader_path/../lib") - - +- set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -mmacosx-version-min=${MACOSX_VERSION}") else (CMAKE_SYSTEM_NAME MATCHES Darwin) -diff --git a/config/root-config.in b/config/root-config.in + MESSAGE(FATAL_ERROR "There is no setup for this this Apple system up to now. Don't know waht to do. Stop cmake at this point.") + endif (CMAKE_SYSTEM_NAME MATCHES Darwin) +diff a/config/root-config.in b/config/root-config.in --- a/config/root-config.in +++ b/config/root-config.in -@@ -304,7 +304,7 @@ macosxicc) +@@ -306,12 +306,6 @@ macosxicc) + auxlibs="-lm -ldl" ;; macosx64) - # MacOS X with gcc (GNU cc v4.x) in 64 bit mode +- # MacOS X with gcc (GNU cc v4.x) in 64 bit mode - macosx_minor=`sw_vers | sed -n 's/ProductVersion://p' | cut -d . -f 2` -+ macosx_minor=7 - # cannot find the one linked to libGraf if relocated after built - if [ $macosx_minor -le 4 ]; then - rootlibs="$rootlibs -lfreetype" +- # cannot find the one linked to libGraf if relocated after built +- if [ $macosx_minor -le 4 ]; then +- rootlibs="$rootlibs -lfreetype" +- fi + auxcflags="${cxxversionflag} -m64" + auxldflags="-m64" + auxlibs="-lm -ldl" +@@ -375,18 +369,11 @@ freebsd* | openbsd* | linux*) + macosx*) + for f in $features ; do + if test "x$f" = "xthread" ; then +- if [ $macosx_minor -ge 5 ]; then + auxcflags="-pthread $auxcflags" + auxlibs="-lpthread $auxlibs" +- else +- auxcflags="-D_REENTRANT $auxcflags" +- auxlibs="-lpthread $auxlibs" +- fi + fi + if test "x$f" = "xrpath" ; then +- if [ $macosx_minor -ge 5 ]; then + auxlibs="-Wl,-rpath,$libdir $auxlibs" +- fi + fi + if test "x$f" = "xlibcxx" ; then + auxcflags="-stdlib=libc++ $auxcflags" diff --git a/pkgs/applications/science/misc/snakemake/default.nix b/pkgs/applications/science/misc/snakemake/default.nix index ed4e82f766c..13eae15ce7f 100644 --- a/pkgs/applications/science/misc/snakemake/default.nix +++ b/pkgs/applications/science/misc/snakemake/default.nix @@ -2,7 +2,7 @@ python3Packages.buildPythonApplication rec { pname = "snakemake"; - version = "5.7.4"; + version = "5.8.1"; propagatedBuildInputs = with python3Packages; [ appdirs @@ -20,7 +20,7 @@ python3Packages.buildPythonApplication rec { src = python3Packages.fetchPypi { inherit pname version; - sha256 = "11f2f00c505d928b91332056667d49c96ed1694bf78e798ce27613948d44a2a2"; + sha256 = "1r1qi14klmxmmw7vcivp45jrjka5rcwlcfggj5npnfb378fx3hb0"; }; doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json diff --git a/pkgs/applications/science/robotics/mavproxy/default.nix b/pkgs/applications/science/robotics/mavproxy/default.nix new file mode 100644 index 00000000000..890e824cf2e --- /dev/null +++ b/pkgs/applications/science/robotics/mavproxy/default.nix @@ -0,0 +1,31 @@ +{ lib, buildPythonApplication, fetchPypi, matplotlib, numpy, pymavlink, pyserial +, setuptools, wxPython_4_0 }: + +buildPythonApplication rec { + pname = "MAVProxy"; + version = "1.8.17"; + + src = fetchPypi { + inherit pname version; + sha256 = "193hjilsmbljbgj7v6icy3b4hzm14l0z6v05v7ycx6larij5xj2r"; + }; + + propagatedBuildInputs = [ + matplotlib + numpy + pymavlink + pyserial + setuptools + wxPython_4_0 + ]; + + # No tests + doCheck = false; + + meta = with lib; { + description = "MAVLink proxy and command line ground station"; + homepage = "https://github.com/ArduPilot/MAVProxy"; + license = licenses.gpl3; + maintainers = with maintainers; [ lopsided98 ]; + }; +} diff --git a/pkgs/applications/version-management/diffuse/default.nix b/pkgs/applications/version-management/diffuse/default.nix deleted file mode 100644 index fc591dd710e..00000000000 --- a/pkgs/applications/version-management/diffuse/default.nix +++ /dev/null @@ -1,33 +0,0 @@ -{ stdenv, fetchurl, python27Packages, makeWrapper }: - -let - inherit (python27Packages) pygtk python; -in stdenv.mkDerivation rec { - version = "0.4.8"; - pname = "diffuse"; - - src = fetchurl { - url = "mirror://sourceforge/project/diffuse/diffuse/${version}/${pname}-${version}.tar.bz2"; - sha256 = "0ayz8bywmk1z3zicb0a7hbxliqpc7xym60s0mawzqllkpadvgly1"; - }; - - buildInputs = [ python pygtk makeWrapper ]; - - buildPhase = '' - python ./install.py --prefix="$out" --sysconfdir="$out/etc" --pythonbin="${python}/bin/python" - wrapProgram "$out/bin/diffuse" --prefix PYTHONPATH : $PYTHONPATH:${pygtk}/lib/${python.libPrefix}/site-packages/gtk-2.0 - ''; - - # no-op, everything is done in buildPhase - installPhase = "true"; - - # NOTE: diffuse installs a .desktop file itself - - meta = with stdenv.lib; { - description = "Graphical diff and merge tool"; - homepage = http://diffuse.sourceforge.net/; - license = licenses.gpl2Plus; - platforms = platforms.linux; - maintainers = [ maintainers.bjornfor ]; - }; -} diff --git a/pkgs/applications/version-management/git-and-tools/git-gone/default.nix b/pkgs/applications/version-management/git-and-tools/git-gone/default.nix index d445e0181f4..4e13d0fb497 100644 --- a/pkgs/applications/version-management/git-and-tools/git-gone/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git-gone/default.nix @@ -2,21 +2,21 @@ rustPlatform.buildRustPackage rec { pname = "git-gone"; - version = "0.1.2"; + version = "0.2.0"; src = fetchFromGitHub { owner = "lunaryorn"; repo = pname; rev = "v${version}"; - sha256 = "0vgkx227wpg9l2zza6446wzshjhnrhba3qhabibn4gg8wwcqmmxf"; + sha256 = "11b0adh46fr0j61pz286pycqz15m1b9pfvlz7z08cd0gw526l3f0"; }; - cargoSha256 = "11h2whlgjhg3j98a9w9k29njj89wx93w0dcyf981985flin709sx"; + cargoSha256 = "1s3v5p6qgz74sh34gvajf453fsgl13sds4v8hz8c6ivipz4hpby2"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ openssl ] - ++ stdenv.lib.optionals stdenv.isDarwin [ curl libiconv Security ]; + ++ stdenv.lib.optionals stdenv.isDarwin [ libiconv Security ]; meta = with stdenv.lib; { description = "Cleanup stale Git branches of pull requests"; diff --git a/pkgs/applications/version-management/git-and-tools/git/default.nix b/pkgs/applications/version-management/git-and-tools/git/default.nix index 7fdb659890a..312879a49e8 100644 --- a/pkgs/applications/version-management/git-and-tools/git/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git/default.nix @@ -21,7 +21,7 @@ assert sendEmailSupport -> perlSupport; assert svnSupport -> perlSupport; let - version = "2.24.0"; + version = "2.24.1"; svn = subversionClient.override { perlBindings = perlSupport; }; gitwebPerlLibs = with perlPackages; [ CGI HTMLParser CGIFast FCGI FCGIProcManager HTMLTagCloud ]; @@ -33,7 +33,7 @@ stdenv.mkDerivation { src = fetchurl { url = "https://www.kernel.org/pub/software/scm/git/git-${version}.tar.xz"; - sha256 = "06rpakbwzck85ncfsgv4xmq3iwab9d4f5y6dqhl8nvb2fccxcwcz"; + sha256 = "0ql5z31vgl7b785gwrf00m129mg7zi9pa65n12ij3mpxx3f28gvj"; }; outputs = [ "out" ]; @@ -230,6 +230,7 @@ stdenv.mkDerivation { -e "s|exec wish|exec '${tk}/bin/wish'|g" \ "$out/$prog" done + ln -s $out/share/git/contrib/completion/git-completion.bash $out/share/bash-completion/completions/gitk '' else '' # Don't wrap Tcl/Tk, replace them by notification scripts for prog in bin/gitk libexec/git-core/git-gui; do @@ -293,10 +294,6 @@ stdenv.mkDerivation { disable_test t1700-split-index "null sha1" # Tested to fail: 2.18.0 - disable_test t7005-editor "editor with a space" - disable_test t7005-editor "core.editor with a space" - - # Tested to fail: 2.18.0 disable_test t9902-completion "sourcing the completion script clears cached --options" ${stdenv.lib.optionalString (!perlSupport) '' @@ -305,9 +302,6 @@ stdenv.mkDerivation { # not check for the Perl prerequisite. disable_test t5150-request-pull ''} - - # As of 2.19.0, t5562 refers to #!/usr/bin/perl - patchShebangs t/t5562/invoke-with-content-length.pl '' + stdenv.lib.optionalString stdenv.isDarwin '' # XXX: Some tests added in 2.24.0 fail. # Please try to re-enable on the next release. diff --git a/pkgs/applications/version-management/git-and-tools/git/update.sh b/pkgs/applications/version-management/git-and-tools/git/update.sh index 1f1a29782ec..a9fa18be155 100755 --- a/pkgs/applications/version-management/git-and-tools/git/update.sh +++ b/pkgs/applications/version-management/git-and-tools/git/update.sh @@ -1,5 +1,5 @@ #!/usr/bin/env nix-shell -#!nix-shell -i bash -p curl common-updater-scripts jq +#!nix-shell -i bash -p curl common-updater-scripts jq git set -eu -o pipefail diff --git a/pkgs/applications/version-management/git-and-tools/lab/default.nix b/pkgs/applications/version-management/git-and-tools/lab/default.nix index a1ef489b007..3e47631caf6 100644 --- a/pkgs/applications/version-management/git-and-tools/lab/default.nix +++ b/pkgs/applications/version-management/git-and-tools/lab/default.nix @@ -2,18 +2,20 @@ buildGoModule rec { pname = "lab"; - version = "0.16.0"; + version = "0.17.2"; src = fetchFromGitHub { owner = "zaquestion"; repo = "lab"; rev = "v${version}"; - sha256 = "0f1gi4mlcxjvz2sgh0hzzsqxg5gfvq2ay7xjd0y1kz3pp8kxja7i"; + sha256 = "0zkwvmzgj7h8lc8jkg2a81392b28c8hkwqzj6dds6q4asbmymx5c"; }; subPackages = [ "." ]; - modSha256 = "0bw47dd1b46ywsian2b957a4ipm77ncidipzri9ra39paqlv7abb"; + modSha256 = "03fqa7s6729g0a6ffiyc61dkldpi7vg8pvvpqak4c0mqi1dycivd"; + + buildFlagsArray = [ "-ldflags=-s -w -X main.version=${version}" ]; postInstall = '' mkdir -p "$out/share/bash-completion/completions" "$out/share/zsh/site-functions" diff --git a/pkgs/applications/version-management/git-and-tools/tig/default.nix b/pkgs/applications/version-management/git-and-tools/tig/default.nix index 59354598d00..424694d7262 100644 --- a/pkgs/applications/version-management/git-and-tools/tig/default.nix +++ b/pkgs/applications/version-management/git-and-tools/tig/default.nix @@ -1,16 +1,16 @@ -{ stdenv, fetchFromGitHub, ncurses, asciidoc, xmlto, docbook_xsl, docbook_xml_dtd_45 +{ stdenv, fetchFromGitHub, ncurses, asciidoc, xmlto, docbook_xsl, docbook_xml_dtd_45, fetchpatch , readline, makeWrapper, git, libiconv, autoreconfHook, findXMLCatalogs, pkgconfig }: stdenv.mkDerivation rec { pname = "tig"; - version = "2.4.1"; + version = "2.5.0"; src = fetchFromGitHub { owner = "jonas"; repo = pname; rev = "${pname}-${version}"; - sha256 = "0i26yfn2vjgsg1kdvhhv55jwzds7ih7cnad1xqvilqm83zh47ksd"; + sha256 = "1lrzgnq8ywq28qd4xyd0y5qfv3j25ra81lcbdqqfywasl8lwz3lf"; }; nativeBuildInputs = [ makeWrapper autoreconfHook asciidoc xmlto docbook_xsl docbook_xml_dtd_45 findXMLCatalogs pkgconfig ]; @@ -25,6 +25,14 @@ stdenv.mkDerivation rec { rm -f contrib/config.make-* ''; + patches = [ + # Fix memory leak. Remove with the next release + (fetchpatch { + url = "https://github.com/jonas/tig/commit/6202c6032f17438a2facb23f02e330b9d0566d9d.patch"; + sha256 = "15zn8hw9y7bqa1np4mj0qnm2z86nif7qwh7wc4vgy2rwxdil85bd"; + }) + ]; + enableParallelBuilding = true; installPhase = '' diff --git a/pkgs/applications/version-management/gitea/default.nix b/pkgs/applications/version-management/gitea/default.nix index 8a22f8c3dc1..99e660d9276 100644 --- a/pkgs/applications/version-management/gitea/default.nix +++ b/pkgs/applications/version-management/gitea/default.nix @@ -8,13 +8,13 @@ with stdenv.lib; buildGoPackage rec { pname = "gitea"; - version = "1.10.0"; + version = "1.10.1"; src = fetchFromGitHub { owner = "go-gitea"; repo = "gitea"; rev = "v${version}"; - sha256 = "19r0gbp4q2sk3br17625m8jinlglijjknqs5y20w3kzxrifrjrmk"; + sha256 = "1b1vmixc94kzfnd266r3hx25lcm3h4ywqg7d9kif83ixm612cj3g"; # Required to generate the same checksum on MacOS due to unicode encoding differences # More information: https://github.com/NixOS/nixpkgs/pull/48128 extraPostFetch = '' diff --git a/pkgs/applications/version-management/gitlab/data.json b/pkgs/applications/version-management/gitlab/data.json index ceea2f44a8b..ed8debb404d 100644 --- a/pkgs/applications/version-management/gitlab/data.json +++ b/pkgs/applications/version-management/gitlab/data.json @@ -1,9 +1,9 @@ { - "version": "12.5.3", - "repo_hash": "1q76yhg4ygs9w5hb8hbv1908d5pfqzr8idmjp06pa4dw5qqqkv97", + "version": "12.5.4", + "repo_hash": "08jngv83pvxjyw3iaqzv484v4mwgwnzg9am3iqfidl9ihbm7i4h2", "owner": "gitlab-org", "repo": "gitlab", - "rev": "v12.5.3-ee", + "rev": "v12.5.4-ee", "passthru": { "GITALY_SERVER_VERSION": "1.72.1", "GITLAB_PAGES_VERSION": "1.12.0", diff --git a/pkgs/applications/version-management/gitolite/default.nix b/pkgs/applications/version-management/gitolite/default.nix index 7c157191ab9..9f298e0129e 100644 --- a/pkgs/applications/version-management/gitolite/default.nix +++ b/pkgs/applications/version-management/gitolite/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, git, nettools, perl }: +{ stdenv, fetchFromGitHub, git, lib, makeWrapper, nettools, perl }: stdenv.mkDerivation rec { pname = "gitolite"; @@ -11,7 +11,9 @@ stdenv.mkDerivation rec { sha256 = "1rkj7gknwjlc5ij9w39zf5mr647bm45la57yjczydmvrb8c56yrh"; }; - buildInputs = [ git nettools perl ]; + buildInputs = [ nettools perl ]; + nativeBuildInputs = [ makeWrapper ]; + propagatedBuildInputs = [ git ]; dontBuild = true; @@ -25,6 +27,11 @@ stdenv.mkDerivation rec { --replace hostname "${nettools}/bin/hostname" ''; + postFixup = '' + wrapProgram $out/bin/gitolite-shell \ + --prefix PATH : "${git}/bin" + ''; + installPhase = '' mkdir -p $out/bin perl ./install -to $out/bin diff --git a/pkgs/applications/video/aegisub/default.nix b/pkgs/applications/video/aegisub/default.nix index 2d82f3d3e2b..83f7ebc29d1 100644 --- a/pkgs/applications/video/aegisub/default.nix +++ b/pkgs/applications/video/aegisub/default.nix @@ -1,16 +1,42 @@ -{ config, stdenv, fetchurl -, libX11, wxGTK -, libiconv, fontconfig, freetype -, libGLU, libGL -, libass, fftw, ffms -, ffmpeg, pkgconfig, zlib # Undocumented (?) dependencies -, icu, boost, intltool # New dependencies -, spellcheckSupport ? true, hunspell ? null -, automationSupport ? true, lua ? null -, openalSupport ? false, openal ? null -, alsaSupport ? stdenv.isLinux, alsaLib ? null -, pulseaudioSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio ? null -, portaudioSupport ? false, portaudio ? null }: +{ config +, stdenv +, fetchurl +, fetchpatch +, libX11 +, wxGTK +, libiconv +, fontconfig +, freetype +, libGLU +, libGL +, libass +, fftw +, ffms +, ffmpeg +, pkg-config +, zlib +, icu +, boost +, intltool + +, spellcheckSupport ? true +, hunspell ? null + +, automationSupport ? true +, lua ? null + +, openalSupport ? false +, openal ? null + +, alsaSupport ? stdenv.isLinux +, alsaLib ? null + +, pulseaudioSupport ? config.pulseaudio or stdenv.isLinux +, libpulseaudio ? null + +, portaudioSupport ? false +, portaudio ? null +}: assert spellcheckSupport -> (hunspell != null); assert automationSupport -> (lua != null); @@ -20,7 +46,8 @@ assert pulseaudioSupport -> (libpulseaudio != null); assert portaudioSupport -> (portaudio != null); with stdenv.lib; -stdenv.mkDerivation rec { +stdenv.mkDerivation + rec { pname = "aegisub"; version = "3.2.2"; @@ -29,12 +56,40 @@ stdenv.mkDerivation rec { sha256 = "11b83qazc8h0iidyj1rprnnjdivj1lpphvpa08y53n42bfa36pn5"; }; - # Fixup build with icu-59 - postPatch = "sed '1i#include <unicode/unistr.h>' -i src/utils.cpp"; + patches = [ + # Compatibility with ICU 59 + (fetchpatch { + url = "https://github.com/Aegisub/Aegisub/commit/dd67db47cb2203e7a14058e52549721f6ff16a49.patch"; + sha256 = "07qqlckiyy64lz8zk1as0vflk9kqnjb340420lp9f0xj93ncssj7"; + }) + + # Compatbility with Boost 1.69 + (fetchpatch { + url = "https://github.com/Aegisub/Aegisub/commit/c3c446a8d6abc5127c9432387f50c5ad50012561.patch"; + sha256 = "1n8wmjka480j43b1pr30i665z8hdy6n3wdiz1ls81wyv7ai5yygf"; + }) + ]; + + nativeBuildInputs = [ + pkg-config + intltool + ]; - buildInputs = with stdenv.lib; - [ pkgconfig intltool libX11 wxGTK fontconfig freetype libGLU libGL - libass fftw ffms ffmpeg zlib icu boost boost.out libiconv + buildInputs = with stdenv.lib; [ + libX11 + wxGTK + fontconfig + freetype + libGLU + libGL + libass + fftw + ffms + ffmpeg + zlib + icu + boost + libiconv ] ++ optional spellcheckSupport hunspell ++ optional automationSupport lua @@ -67,11 +122,11 @@ stdenv.mkDerivation rec { audio, and features many powerful tools for styling them, including a built-in real-time video preview. ''; - homepage = http://www.aegisub.org/; + homepage = "http://www.aegisub.org/"; + # The Aegisub sources are itself BSD/ISC, + # but they are linked against GPL'd softwares + # - so the resulting program will be GPL license = licenses.bsd3; - # The Aegisub sources are itself BSD/ISC, - # but they are linked against GPL'd softwares - # - so the resulting program will be GPL maintainers = [ maintainers.AndersonTorres ]; platforms = [ "i686-linux" "x86_64-linux" ]; }; diff --git a/pkgs/applications/video/key-mon/default.nix b/pkgs/applications/video/key-mon/default.nix deleted file mode 100644 index 7dc350da647..00000000000 --- a/pkgs/applications/video/key-mon/default.nix +++ /dev/null @@ -1,28 +0,0 @@ -{ stdenv, fetchurl, gnome2, librsvg, pythonPackages }: - -pythonPackages.buildPythonApplication rec { - pname = "key-mon"; - version = "1.17"; - namePrefix = ""; - - src = fetchurl { - url = "https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/key-mon/${pname}-${version}.tar.gz"; - sha256 = "1liz0dxcqmchbnl1xhlxkqm3gh76wz9jxdxn9pa7dy77fnrjkl5q"; - }; - - propagatedBuildInputs = - [ gnome2.python_rsvg librsvg pythonPackages.pygtk pythonPackages.xlib ]; - - doCheck = false; - - preFixup = '' - export makeWrapperArgs="--set GDK_PIXBUF_MODULE_FILE $GDK_PIXBUF_MODULE_FILE" - ''; - - meta = with stdenv.lib; { - homepage = https://code.google.com/archive/p/key-mon; - description = "Utility to show live keyboard and mouse status for teaching and screencasts"; - license = licenses.asl20; - maintainers = [ maintainers.goibhniu ]; - }; -} diff --git a/pkgs/applications/video/kodi/default.nix b/pkgs/applications/video/kodi/default.nix index 0302dd24646..d47797a3046 100644 --- a/pkgs/applications/video/kodi/default.nix +++ b/pkgs/applications/video/kodi/default.nix @@ -43,15 +43,15 @@ assert vdpauSupport -> libvdpau != null; assert useWayland -> wayland != null && wayland-protocols != null && waylandpp != null && libxkbcommon != null; let - kodiReleaseDate = "20190901"; - kodiVersion = "18.4"; + kodiReleaseDate = "20191116"; + kodiVersion = "18.5"; rel = "Leia"; kodi_src = fetchFromGitHub { owner = "xbmc"; repo = "xbmc"; rev = "${kodiVersion}-${rel}"; - sha256 = "1m0295czxabdcqyqf5m94av9d88pzhnzjvyfs1q07xqq82h313p7"; + sha256 = "0pcrraj1ddzrd296br10yjnaxgb3iym74xzixcakaqhhp00f5hf6"; }; cmakeProto = fetchurl { diff --git a/pkgs/applications/video/makemkv/default.nix b/pkgs/applications/video/makemkv/default.nix index 77aa2779b5d..ca202c5ce60 100644 --- a/pkgs/applications/video/makemkv/default.nix +++ b/pkgs/applications/video/makemkv/default.nix @@ -3,21 +3,21 @@ }: let - version = "1.14.5"; + version = "1.14.7"; # Using two URLs as the first one will break as soon as a new version is released src_bin = fetchurl { urls = [ "http://www.makemkv.com/download/makemkv-bin-${version}.tar.gz" "http://www.makemkv.com/download/old/makemkv-bin-${version}.tar.gz" ]; - sha256 = "1rnkx0h149n3pawmk8d234x5w1xw4kady9pgrcc5aw6krbx38nis"; + sha256 = "19j62vyk8havv38lh35108f7jmrqiqzikl3aqlsncxxa69m6fv5n"; }; src_oss = fetchurl { urls = [ "http://www.makemkv.com/download/makemkv-oss-${version}.tar.gz" "http://www.makemkv.com/download/old/makemkv-oss-${version}.tar.gz" ]; - sha256 = "1jg10mslcl0sfwdd9p7hy9zfvk0xc7qhdakiv1kbilsl42bgaxyi"; + sha256 = "1w6b4cvhfg1dv2claam0l6slhjqzy0n2lvwk1ggkh4c561qbfp59"; }; in mkDerivation { pname = "makemkv"; diff --git a/pkgs/applications/video/obs-studio/default.nix b/pkgs/applications/video/obs-studio/default.nix index e5022242ef8..fdcfd7e0bec 100644 --- a/pkgs/applications/video/obs-studio/default.nix +++ b/pkgs/applications/video/obs-studio/default.nix @@ -37,13 +37,13 @@ let optional = stdenv.lib.optional; in mkDerivation rec { pname = "obs-studio"; - version = "24.0.3"; + version = "24.0.4"; src = fetchFromGitHub { owner = "jp9000"; repo = "obs-studio"; rev = version; - sha256 = "0g8nzs696f3myz4hvygav85b0jgjmn6dicy50axmapdv8miff9xa"; + sha256 = "0m15ch2ix9qrdf1a9mj7wcpl72z3h13zx60c9q72sb1435id2g1q"; }; nativeBuildInputs = [ cmake diff --git a/pkgs/applications/video/recordmydesktop/default.nix b/pkgs/applications/video/recordmydesktop/default.nix deleted file mode 100644 index e4d6e14d098..00000000000 --- a/pkgs/applications/video/recordmydesktop/default.nix +++ /dev/null @@ -1,29 +0,0 @@ -{ stdenv, fetchsvn, autoreconfHook, zlib, popt, alsaLib, libvorbis, libtheora -, libICE, libSM, libX11, libXext, libXfixes, libXdamage }: - -stdenv.mkDerivation rec { - pname = "recordmydesktop"; - version = "0.3.8.1-svn${rev}"; - rev = "602"; - - src = fetchsvn { - url = https://recordmydesktop.svn.sourceforge.net/svnroot/recordmydesktop/trunk/recordmydesktop; - inherit rev; - sha256 = "1avirkc4ymrd575m616pi6wpgq1i0r5sb3qahps1g18sjpxks0lf"; - }; - - nativeBuildInputs = [ autoreconfHook ]; - - buildInputs = [ - zlib popt alsaLib libICE libSM libX11 libXext - libXfixes libXdamage libvorbis libtheora - ]; - - meta = with stdenv.lib; { - description = "Desktop session recorder"; - homepage = http://recordmydesktop.sourceforge.net/; - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = [ ]; - }; -} diff --git a/pkgs/applications/video/recordmydesktop/gtk.nix b/pkgs/applications/video/recordmydesktop/gtk.nix deleted file mode 100644 index cf02825501f..00000000000 --- a/pkgs/applications/video/recordmydesktop/gtk.nix +++ /dev/null @@ -1,37 +0,0 @@ -{ stdenv, lib, fetchsvn, recordmydesktop, autoreconfHook, pkgconfig -, pythonPackages, jack2, xwininfo }: - -let - binPath = lib.makeBinPath [ recordmydesktop jack2 xwininfo ]; - -in stdenv.mkDerivation { - pname = "gtk-recordmydesktop"; - version = "0.3.8-svn${recordmydesktop.rev}"; - - src = fetchsvn { - url = https://recordmydesktop.svn.sourceforge.net/svnroot/recordmydesktop/trunk/gtk-recordmydesktop; - inherit (recordmydesktop) rev; - sha256 = "010aykgjfxhyiixq9a9fg3p1a1ixz59m1vkn16hpy0lybgf4dsby"; - }; - - nativeBuildInputs = [ autoreconfHook pkgconfig ]; - - buildInputs = with pythonPackages; [ - python pygtk wrapPython - ]; - - pythonPath = with pythonPackages; [ pygtk ]; - - postInstall = '' - makeWrapperArgs="--prefix PATH : ${binPath}" - wrapPythonPrograms - ''; - - meta = with stdenv.lib; { - description = "GTK frontend for recordmydesktop"; - homepage = http://recordmydesktop.sourceforge.net/; - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = [ ]; - }; -} diff --git a/pkgs/applications/video/recordmydesktop/qt.nix b/pkgs/applications/video/recordmydesktop/qt.nix deleted file mode 100644 index 573a18f62ce..00000000000 --- a/pkgs/applications/video/recordmydesktop/qt.nix +++ /dev/null @@ -1,37 +0,0 @@ -{ stdenv, lib, fetchsvn, recordmydesktop, autoreconfHook, pkgconfig -, glib, pythonPackages, qt4, jack2, xwininfo }: - -let - binPath = lib.makeBinPath [ recordmydesktop jack2 xwininfo ]; - -in stdenv.mkDerivation { - pname = "qt-recordmydesktop"; - version = "0.3.8-svn${recordmydesktop.rev}"; - - src = fetchsvn { - url = https://recordmydesktop.svn.sourceforge.net/svnroot/recordmydesktop/trunk/qt-recordmydesktop; - inherit (recordmydesktop) rev; - sha256 = "0vz7amrmz317sbx2cv2186d0r57as4l26xa9rpim5gbvzk20caqc"; - }; - - nativeBuildInputs = [ autoreconfHook pkgconfig ]; - - buildInputs = [ glib qt4 ] ++ (with pythonPackages; [ - python wrapPython pyqt4 - ]); - - pythonPath = with pythonPackages; [ pyqt4 ]; - - postInstall = '' - makeWrapperArgs="--prefix PATH : ${binPath}" - wrapPythonPrograms - ''; - - meta = with stdenv.lib; { - description = "GTK frontend for recordmydesktop"; - homepage = http://recordmydesktop.sourceforge.net/; - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = [ ]; - }; -} diff --git a/pkgs/applications/virtualization/conmon/default.nix b/pkgs/applications/virtualization/conmon/default.nix index a3576557f34..77f3d271b59 100644 --- a/pkgs/applications/virtualization/conmon/default.nix +++ b/pkgs/applications/virtualization/conmon/default.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { project = "conmon"; name = "${project}-${version}"; - version = "2.0.3"; + version = "2.0.8"; src = fetchFromGitHub { owner = "containers"; repo = project; rev = "v${version}"; - sha256 = "0xsirdsgq84bsjb1xgzv3pnjhm9l13vwj79zd8rjdd7p28wsxb0y"; + sha256 = "17pv80ba79wh4nwxy3wl0vl1m8054s346hgcp87iy3mpnrvq2cv2"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/virtualization/crosvm/default-seccomp-policy-dir.patch b/pkgs/applications/virtualization/crosvm/default-seccomp-policy-dir.patch new file mode 100644 index 00000000000..46b091b3a35 --- /dev/null +++ b/pkgs/applications/virtualization/crosvm/default-seccomp-policy-dir.patch @@ -0,0 +1,15 @@ +diff --git a/src/main.rs b/src/main.rs +index 81f20a7..481ebd7 100644 +--- a/src/main.rs ++++ b/src/main.rs +@@ -158,7 +158,9 @@ impl Default for Config { + wayland_dmabuf: false, + shared_dirs: Vec::new(), + sandbox: !cfg!(feature = "default-no-sandbox"), +- seccomp_policy_dir: PathBuf::from(SECCOMP_POLICY_DIR), ++ seccomp_policy_dir: PathBuf::from( ++ option_env!("DEFAULT_SECCOMP_POLICY_DIR").unwrap_or(SECCOMP_POLICY_DIR), ++ ), + seccomp_log_failures: false, + cras_audio: false, + cras_capture: false, diff --git a/pkgs/applications/virtualization/crosvm/default.nix b/pkgs/applications/virtualization/crosvm/default.nix new file mode 100644 index 00000000000..106b39b0336 --- /dev/null +++ b/pkgs/applications/virtualization/crosvm/default.nix @@ -0,0 +1,83 @@ +{ stdenv, rustPlatform, fetchgit, runCommand, symlinkJoin +, pkgconfig, minijail, dtc, libusb1, libcap +}: + +let + + upstreamInfo = with builtins; fromJSON (readFile ./upstream-info.json); + + arch = with stdenv.hostPlatform; + if isAarch64 then "arm" + else if isx86_64 then "x86_64" + else throw "no seccomp policy files available for host platform"; + + # used to turn symlinks into real files because write permissions are necessary for the vendoring process + delink = src: runCommand "${src.name}-delinked" { + preferLocalBuild = true; + allowSubstitutes = false; + } '' + cp -prL --reflink=auto ${src} $out + ''; + + # used to place subtrees into the location they have in the Chromium monorepo + move = src: target: runCommand "moved-${src.name}" { + preferLocalBuild = true; + allowSubstitutes = false; + } '' + mkdir -p $(dirname $out/${target}) + ln -s ${src} $out/${target} + ''; + + # used to check out subtrees from the Chromium monorepo + chromiumSource = name: subtrees: delink (symlinkJoin { + inherit name; + paths = stdenv.lib.mapAttrsToList ( + location: { url, rev, sha256, fetchSubmodules, ... }: + move (fetchgit { + inherit url rev sha256 fetchSubmodules; + }) location) subtrees; + }); + +in + + rustPlatform.buildRustPackage rec { + pname = "crosvm"; + inherit (upstreamInfo) version; + + src = chromiumSource "${pname}-sources" upstreamInfo.components; + + sourceRoot = "${src.name}/chromiumos/platform/crosvm"; + + patches = [ + ./default-seccomp-policy-dir.patch + ]; + + cargoSha256 = "16cfp79c13ng5jjcrvz00h3cg7cc9ywhjiq02vsm757knn9jgr1v"; + + nativeBuildInputs = [ pkgconfig ]; + + buildInputs = [ dtc libcap libusb1 minijail ]; + + postPatch = '' + sed -i "s|/usr/share/policy/crosvm/|$out/share/policy/|g" \ + seccomp/*/*.policy + ''; + + preBuild = '' + export DEFAULT_SECCOMP_POLICY_DIR=$out/share/policy + ''; + + postInstall = '' + mkdir -p $out/share/policy/ + cp seccomp/${arch}/* $out/share/policy/ + ''; + + passthru.updateScript = ./update.py; + + meta = with stdenv.lib; { + description = "A secure virtual machine monitor for KVM"; + homepage = "https://chromium.googlesource.com/chromiumos/platform/crosvm/"; + license = licenses.bsd3; + platforms = [ "aarch64-linux" "x86_64-linux" ]; + }; + } diff --git a/pkgs/applications/virtualization/crosvm/update.py b/pkgs/applications/virtualization/crosvm/update.py new file mode 100755 index 00000000000..d00bffce3b8 --- /dev/null +++ b/pkgs/applications/virtualization/crosvm/update.py @@ -0,0 +1,85 @@ +#! /usr/bin/env nix-shell +#! nix-shell -p python3 -p nix-prefetch-git -i python + +import base64 +import csv +import json +import re +import subprocess +import xml.etree.ElementTree as ElementTree +from codecs import iterdecode +from operator import itemgetter +from os.path import dirname, splitext +from urllib.request import urlopen + +# ChromiumOS components required to build crosvm. +components = ['chromiumos/platform/crosvm', 'chromiumos/third_party/adhd'] + +git_root = 'https://chromium.googlesource.com/' +manifest_versions = f'{git_root}chromiumos/manifest-versions' +buildspecs_url = f'{manifest_versions}/+/refs/heads/master/paladin/buildspecs/' + +# CrOS version numbers look like this: +# [<chrome-major-version>.]<tip-build>.<branch-build>.<branch-branch-build> +# +# As far as I can tell, branches are where internal Google +# modifications are added to turn Chromium OS into Chrome OS, and +# branch branches are used for fixes for specific devices. So for +# Chromium OS they will always be 0. This is a best guess, and is not +# documented. +with urlopen('https://cros-omahaproxy.appspot.com/all') as resp: + versions = csv.DictReader(iterdecode(resp, 'utf-8')) + stables = filter(lambda v: v['track'] == 'stable-channel', versions) + stable = sorted(stables, key=itemgetter('chrome_version'), reverse=True)[0] + +chrome_major_version = re.match(r'\d+', stable['chrome_version'])[0] +chromeos_tip_build = re.match(r'\d+', stable['chromeos_version'])[0] + +# Find the most recent buildspec for the stable Chrome version and +# Chromium OS build number. Its branch build and branch branch build +# numbers will (almost?) certainly be 0. It will then end with an rc +# number -- presumably these are release candidates, one of which +# becomes the final release. Presumably the one with the highest rc +# number. +with urlopen(f'{buildspecs_url}{chrome_major_version}/?format=TEXT') as resp: + listing = base64.decodebytes(resp.read()).decode('utf-8') + buildspecs = [(line.split('\t', 1)[1]) for line in listing.splitlines()] + buildspecs = [s for s in buildspecs if s.startswith(chromeos_tip_build)] + buildspecs.sort(reverse=True) + buildspec = splitext(buildspecs[0])[0] + +revisions = {} + +# Read the buildspec, and extract the git revisions for each component. +with urlopen(f'{buildspecs_url}{chrome_major_version}/{buildspec}.xml?format=TEXT') as resp: + xml = base64.decodebytes(resp.read()).decode('utf-8') + root = ElementTree.fromstring(xml) + for project in root.findall('project'): + revisions[project.get('name')] = project.get('revision') + +# Initialize the data that will be output from this script. Leave the +# rc number in buildspec so nobody else is subject to the same level +# of confusion I have been. +data = {'version': f'{chrome_major_version}.{buildspec}', 'components': {}} + +# Fill in the 'components' dictionary with the output from +# nix-prefetch-git, which can be passed straight to fetchGit when +# imported by Nix. +for component in components: + argv = ['nix-prefetch-git', + '--url', git_root + component, + '--rev', revisions[component]] + + output = subprocess.check_output(argv) + data['components'][component] = json.loads(output.decode('utf-8')) + +# Find the path to crosvm's default.nix, so the srcs data can be +# written into the same directory. +argv = ['nix-instantiate', '--eval', '--json', '-A', 'crosvm.meta.position'] +position = json.loads(subprocess.check_output(argv).decode('utf-8')) +filename = re.match(r'[^:]*', position)[0] + +# Finally, write the output. +with open(dirname(filename) + '/upstream-info.json', 'w') as out: + json.dump(data, out, indent=2) + out.write('\n') diff --git a/pkgs/applications/virtualization/crosvm/upstream-info.json b/pkgs/applications/virtualization/crosvm/upstream-info.json new file mode 100644 index 00000000000..01921f9460a --- /dev/null +++ b/pkgs/applications/virtualization/crosvm/upstream-info.json @@ -0,0 +1,19 @@ +{ + "version": "77.12371.0.0-rc1", + "components": { + "chromiumos/platform/crosvm": { + "url": "https://chromium.googlesource.com/chromiumos/platform/crosvm", + "rev": "f5285c647acacb4f25ef8cf9334254b976e71686", + "date": "2019-07-25T22:15:48+00:00", + "sha256": "1ccjd540xmpad082w9ri13q78wkg95xxmq38b8ybcrj4f7lsxm6w", + "fetchSubmodules": false + }, + "chromiumos/third_party/adhd": { + "url": "https://chromium.googlesource.com/chromiumos/third_party/adhd", + "rev": "a1c0d93d991daffb042b979ac807bbe9c1f9a3ee", + "date": "2019-07-25T20:38:50-07:00", + "sha256": "11bijqd876adarq96syywn6znfbiflqssgb2j4w032iw2vfnnsyy", + "fetchSubmodules": false + } + } +} diff --git a/pkgs/applications/virtualization/crun/default.nix b/pkgs/applications/virtualization/crun/default.nix index 7dddc3b533b..9376adf8d6a 100644 --- a/pkgs/applications/virtualization/crun/default.nix +++ b/pkgs/applications/virtualization/crun/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "crun"; - version = "0.8"; + version = "0.10.6"; src = fetchFromGitHub { owner = "containers"; repo = pname; rev = version; - sha256 = "1anvlgw373031w0pp0b28l10yrnyhbj192n60bbbjahw487dk2fi"; + sha256 = "0v1hrlpnln0c976fb0k2ig4jv11qbyzf95z0wy92fd8r8in16rc1"; fetchSubmodules = true; }; diff --git a/pkgs/applications/virtualization/podman-compose/default.nix b/pkgs/applications/virtualization/podman-compose/default.nix new file mode 100644 index 00000000000..31755f87f63 --- /dev/null +++ b/pkgs/applications/virtualization/podman-compose/default.nix @@ -0,0 +1,21 @@ +{ lib, buildPythonApplication, fetchPypi, podman, pyyaml }: + +buildPythonApplication rec { + version = "0.1.5"; + pname = "podman-compose"; + + src = fetchPypi { + inherit pname version; + sha256 = "1sgbc889zq127qhxa9frhswa1mid19fs5qnyzfihx648y5i968pv"; + }; + + propagatedBuildInputs = [ pyyaml podman ]; + + meta = with lib; { + description = "An implementation of docker-compose with podman backend"; + homepage = "https://github.com/containers/podman-compose"; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ sikmir ]; + }; +} diff --git a/pkgs/applications/virtualization/virtualbox/default.nix b/pkgs/applications/virtualization/virtualbox/default.nix index 13e70c2561d..6ecdf1d29bc 100644 --- a/pkgs/applications/virtualization/virtualbox/default.nix +++ b/pkgs/applications/virtualization/virtualbox/default.nix @@ -2,7 +2,7 @@ , libX11, xorgproto, libXext, libXcursor, libXmu, libIDL, SDL, libcap, libGL , libpng, glib, lvm2, libXrandr, libXinerama, libopus, qtbase, qtx11extras , qttools, qtsvg, qtwayland, pkgconfig, which, docbook_xsl, docbook_xml_dtd_43 -, alsaLib, curl, libvpx, nettools, dbus, substituteAll +, alsaLib, curl, libvpx, nettools, dbus, substituteAll, fetchpatch , makeself, perl , javaBindings ? true, jdk ? null # Almost doesn't affect closure size , pythonBindings ? false, python3 ? null @@ -21,8 +21,8 @@ let buildType = "release"; # Remember to change the extpackRev and version in extpack.nix and # guest-additions/default.nix as well. - main = "1hxbvr78b0fddcn7npz72ki89lpmbgqj4b5qvxm1wik7v0d8v1y8"; - version = "6.0.12"; + main = "036x2mvkk22lbg72cz6pik9z538j1ag6mmwjjmfikgrq1i7v24jy"; + version = "6.0.14"; in stdenv.mkDerivation { pname = "virtualbox"; inherit version; @@ -92,9 +92,26 @@ in stdenv.mkDerivation { }) ++ [ ./qtx11extras.patch - # Kernel 5.3 fix, should be fixed with VirtualBox 6.0.14 - # https://www.virtualbox.org/ticket/18911 - ./kernel-5.3-fix.patch + # Kernel 5.4 fix, should be fixed with next upstream release + # https://www.virtualbox.org/ticket/18945 + (fetchpatch { + name = "kernel-5.4-fix-1.patch"; + url = "https://www.virtualbox.org/changeset/81586/vbox?format=diff"; + sha256 = "0zbkc9v65pkdmjik53x29g39qyf7narkhpwpx5n1n1bfqnhf0k1r"; + stripLen = 1; + }) + (fetchpatch { + name = "kernel-5.4-fix-2.patch"; + url = "https://www.virtualbox.org/changeset/81587/vbox?format=diff"; + sha256 = "1j98cqxj8qlqwaqr4mvwwbkmchw8jmygjwgzz82gix7fj76j2y9c"; + stripLen = 1; + }) + (fetchpatch { + name = "kernel-5.4-fix-3.patch"; + url = "https://www.virtualbox.org/changeset/81649/vbox?format=diff"; + sha256 = "1d6p5k5dgzmjglqfkbcbvpn1x3wxila30q4gcbb7pxwfgclaw2hk"; + stripLen = 1; + }) ]; postPatch = '' diff --git a/pkgs/applications/virtualization/virtualbox/extpack.nix b/pkgs/applications/virtualization/virtualbox/extpack.nix index 9357a641de2..c935a40c540 100644 --- a/pkgs/applications/virtualization/virtualbox/extpack.nix +++ b/pkgs/applications/virtualization/virtualbox/extpack.nix @@ -2,7 +2,7 @@ with lib; -let version = "6.0.12"; +let version = "6.0.14"; in fetchurl rec { name = "Oracle_VM_VirtualBox_Extension_Pack-${version}.vbox-extpack"; @@ -11,7 +11,7 @@ fetchurl rec { # Manually sha256sum the extensionPack file, must be hex! # Thus do not use `nix-prefetch-url` but instead plain old `sha256sum`. # Checksums can also be found at https://www.virtualbox.org/download/hashes/${version}/SHA256SUMS - let value = "27a0956940654b0accf4d79692078bd496d9f062e4ed3da69e5421cba8d1e444"; + let value = "c8a5cc980c9c94cdac3d94e23cf159c2433aae76b416dbfb5b1a918758f21e63"; in assert (builtins.stringLength value) == 64; value; meta = { diff --git a/pkgs/applications/virtualization/virtualbox/guest-additions/default.nix b/pkgs/applications/virtualization/virtualbox/guest-additions/default.nix index af247af0051..690b72f3eeb 100644 --- a/pkgs/applications/virtualization/virtualbox/guest-additions/default.nix +++ b/pkgs/applications/virtualization/virtualbox/guest-additions/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, lib, patchelf, cdrkit, kernel, which, makeWrapper -, zlib, xorg, dbus, virtualbox, dos2unix }: +, zlib, xorg, dbus, virtualbox, dos2unix, fetchpatch, findutils, patchutils }: let version = virtualbox.version; @@ -21,12 +21,12 @@ let { name = "libXfixes.so"; pkg = xorg.libXfixes; } ]; -in stdenv.mkDerivation { +in stdenv.mkDerivation rec { name = "VirtualBox-GuestAdditions-${version}-${kernel.version}"; src = fetchurl { url = "http://download.virtualbox.org/virtualbox/${version}/VBoxGuestAdditions_${version}.iso"; - sha256 = "0hflsbx70dli34mpx94vd33p55ycfs3ahzwcdzqxdiwiiskjpykq"; + sha256 = "1c9ysx0fhxxginmp607b4fk74dvlr32n6w52gawm06prf4xg90nb"; }; KERN_DIR = "${kernel.dev}/lib/modules/${kernel.modDirVersion}/build"; @@ -43,13 +43,67 @@ in stdenv.mkDerivation { prePatch = '' substituteInPlace src/vboxguest-${version}/vboxvideo/vbox_ttm.c \ --replace "<ttm/" "<drm/ttm/" - ${dos2unix}/bin/dos2unix src/vboxguest-${version}/vboxguest/r0drv/linux/mp-r0drv-linux.c + + echo ${lib.escapeShellArgs patches} | \ + ${findutils}/bin/xargs -n1 ${patchutils}/bin/lsdiff --strip=1 --addprefix=src/vboxguest-${version}/ | \ + ${findutils}/bin/xargs ${dos2unix}/bin/dos2unix ''; patchFlags = [ "-p1" "-d" "src/vboxguest-${version}" ]; - # Kernel 5.3 fix, should be fixed with VirtualBox 6.0.14 - # https://www.virtualbox.org/ticket/18911 - patches = [ ./kernel-5.3-fix.patch ]; + # Kernel 5.4 fix, should be fixed with next upstream release + # https://www.virtualbox.org/ticket/18945 + patches = lib.concatLists (lib.mapAttrsToList (changeset: args: + map (arg: + fetchpatch ({ + name = "kernel-5.4-fix-${changeset}.patch"; + url = "https://www.virtualbox.org/changeset/${changeset}/vbox?format=diff"; + } // arg)) args) { + "81586" = [{ + sha256 = "126z67x6vy65w6jlqbh4z4f1cffxnycwb69vns0154bawbsbxsiw"; + stripLen = 5; + extraPrefix = "vboxguest/"; + }]; + "81587" = [ + { + sha256 = "0simzswnl0wvnc2i9gixz99rfc7lxk1nrnskksrlrrl9hqnh0lva"; + stripLen = 5; + extraPrefix = "vboxsf/"; + includes = [ "*/the-linux-kernel.h" ]; + } + { + sha256 = "0a8r9h3x3lcjq2fykgqhdaykp00rnnkbxz8xnxg847zgvca15y02"; + stripLen = 5; + extraPrefix = "vboxguest/"; + includes = [ "*/the-linux-kernel.h" ]; + } + ]; + "81649" = [ + { + sha256 = "1p1skxlvqigydxr4sk7w51lpk7nxg0d9lppq39sdnfmgi1z0h0sc"; + stripLen = 2; + extraPrefix = "vboxguest/"; + includes = [ "*/cdefs.h" ]; + } + { + sha256 = "1j060ggdnndyjdhkfvs15306gl7g932sim9xjmx2mnx8gjdmg37f"; + stripLen = 2; + extraPrefix = "vboxsf/"; + includes = [ "*/cdefs.h" ]; + } + { + sha256 = "060h3a5k2yklbvlg0hyg4x87xrg37cvv3rjb67xizlwvlyy6ykkg"; + stripLen = 5; + extraPrefix = "vboxguest/"; + includes = [ "*/thread2-r0drv-linux.c" ]; + } + { + sha256 = "0cxlkf7cy751gl8dgzr7vkims1kmx5pgzsrxyk8w18zyp5nk9glw"; + stripLen = 7; + extraPrefix = "vboxvideo/"; + includes = [ "*/vbox_*.c" ]; + } + ]; + }); unpackPhase = '' ${if stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux" then '' diff --git a/pkgs/applications/virtualization/virtualbox/guest-additions/kernel-5.3-fix.patch b/pkgs/applications/virtualization/virtualbox/guest-additions/kernel-5.3-fix.patch deleted file mode 100644 index 0bdd9ec1056..00000000000 --- a/pkgs/applications/virtualization/virtualbox/guest-additions/kernel-5.3-fix.patch +++ /dev/null @@ -1,50 +0,0 @@ ---- a/vboxguest/r0drv/linux/mp-r0drv-linux.c -+++ a/vboxguest/r0drv/linux/mp-r0drv-linux.c -@@ -283,12 +283,15 @@ - if (RTCpuSetCount(&OnlineSet) > 1) - { - /* Fire the function on all other CPUs without waiting for completion. */ --# if LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -+# if LINUX_VERSION_CODE >= KERNEL_VERSION(5, 3, 0) -+ smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* wait */); -+# elif LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) - int rc = smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* wait */); -+ Assert(!rc); NOREF(rc); - # else - int rc = smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* retry */, 0 /* wait */); --# endif - Assert(!rc); NOREF(rc); -+# endif - } - #endif - -@@ -326,7 +329,6 @@ - { - #ifdef CONFIG_SMP - IPRT_LINUX_SAVE_EFL_AC(); -- int rc; - RTMPARGS Args; - - RTTHREADPREEMPTSTATE PreemptState = RTTHREADPREEMPTSTATE_INITIALIZER; -@@ -337,14 +339,17 @@ - Args.cHits = 0; - - RTThreadPreemptDisable(&PreemptState); --# if LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -- rc = smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+# if LINUX_VERSION_CODE >= KERNEL_VERSION(5, 3, 0) -+ smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+# elif LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -+ int rc = smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+ Assert(rc == 0); NOREF(rc); - # else /* older kernels */ -- rc = smp_call_function(rtmpLinuxWrapper, &Args, 0 /* retry */, 1 /* wait */); -+ int rc = smp_call_function(rtmpLinuxWrapper, &Args, 0 /* retry */, 1 /* wait */); -+ Assert(rc == 0); NOREF(rc); - # endif /* older kernels */ - RTThreadPreemptRestore(&PreemptState); - -- Assert(rc == 0); NOREF(rc); - IPRT_LINUX_RESTORE_EFL_AC(); - #else - RT_NOREF(pfnWorker, pvUser1, pvUser2); diff --git a/pkgs/applications/virtualization/virtualbox/kernel-5.3-fix.patch b/pkgs/applications/virtualization/virtualbox/kernel-5.3-fix.patch deleted file mode 100644 index ba9c7c941db..00000000000 --- a/pkgs/applications/virtualization/virtualbox/kernel-5.3-fix.patch +++ /dev/null @@ -1,72 +0,0 @@ ---- a/src/VBox/HostDrivers/VBoxNetFlt/linux/VBoxNetFlt-linux.c -+++ b/src/VBox/HostDrivers/VBoxNetFlt/linux/VBoxNetFlt-linux.c -@@ -2123,7 +2123,9 @@ - #endif - if (in_dev != NULL) - { -- for_ifa(in_dev) { -+ struct in_ifaddr *ifa; -+ -+ for (ifa = in_dev->ifa_list; ifa; ifa = ifa->ifa_next) { - if (VBOX_IPV4_IS_LOOPBACK(ifa->ifa_address)) - return NOTIFY_OK; - -@@ -2137,7 +2139,7 @@ - - pThis->pSwitchPort->pfnNotifyHostAddress(pThis->pSwitchPort, - /* :fAdded */ true, kIntNetAddrType_IPv4, &ifa->ifa_address); -- } endfor_ifa(in_dev); -+ } - } - - /* ---- a/src/VBox/Runtime/r0drv/linux/mp-r0drv-linux.c -+++ a/src/VBox/Runtime/r0drv/linux/mp-r0drv-linux.c -@@ -283,12 +283,15 @@ - if (RTCpuSetCount(&OnlineSet) > 1) - { - /* Fire the function on all other CPUs without waiting for completion. */ --# if LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -+# if LINUX_VERSION_CODE >= KERNEL_VERSION(5, 3, 0) -+ smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* wait */); -+# elif LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) - int rc = smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* wait */); -+ Assert(!rc); NOREF(rc); - # else - int rc = smp_call_function(rtmpLinuxAllWrapper, &Args, 0 /* retry */, 0 /* wait */); --# endif - Assert(!rc); NOREF(rc); -+# endif - } - #endif - -@@ -326,7 +329,6 @@ - { - #ifdef CONFIG_SMP - IPRT_LINUX_SAVE_EFL_AC(); -- int rc; - RTMPARGS Args; - - RTTHREADPREEMPTSTATE PreemptState = RTTHREADPREEMPTSTATE_INITIALIZER; -@@ -337,14 +339,17 @@ - Args.cHits = 0; - - RTThreadPreemptDisable(&PreemptState); --# if LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -- rc = smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+# if LINUX_VERSION_CODE >= KERNEL_VERSION(5, 3, 0) -+ smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+# elif LINUX_VERSION_CODE >= KERNEL_VERSION(2, 6, 27) -+ int rc = smp_call_function(rtmpLinuxWrapper, &Args, 1 /* wait */); -+ Assert(rc == 0); NOREF(rc); - # else /* older kernels */ -- rc = smp_call_function(rtmpLinuxWrapper, &Args, 0 /* retry */, 1 /* wait */); -+ int rc = smp_call_function(rtmpLinuxWrapper, &Args, 0 /* retry */, 1 /* wait */); -+ Assert(rc == 0); NOREF(rc); - # endif /* older kernels */ - RTThreadPreemptRestore(&PreemptState); - -- Assert(rc == 0); NOREF(rc); - IPRT_LINUX_RESTORE_EFL_AC(); - #else - RT_NOREF(pfnWorker, pvUser1, pvUser2); diff --git a/pkgs/applications/window-managers/i3/status-rust.nix b/pkgs/applications/window-managers/i3/status-rust.nix index c8731408951..80750ab61be 100644 --- a/pkgs/applications/window-managers/i3/status-rust.nix +++ b/pkgs/applications/window-managers/i3/status-rust.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "i3status-rust"; - version = "0.11.0"; + version = "0.12.0"; src = fetchFromGitHub { owner = "greshake"; repo = pname; rev = "v${version}"; - sha256 = "15083nagd0kzpkay5jxcq5i16yvybd4sh03g9x4q9xq4cy0qwj11"; + sha256 = "1banaiqj4gdsg886kb7l1fxhmf33vxnwwha46397s7gwfxkvxz4n"; }; cargoSha256 = "1cbx2jll0bj547dvwzjprzidndbqn1c4c6hmbfgjgdkxmmrpb0r1"; diff --git a/pkgs/build-support/cc-wrapper/default.nix b/pkgs/build-support/cc-wrapper/default.nix index 757985e0716..151313847e4 100644 --- a/pkgs/build-support/cc-wrapper/default.nix +++ b/pkgs/build-support/cc-wrapper/default.nix @@ -237,7 +237,7 @@ stdenv.mkDerivation { fi '' - + optionalString (libc != null) '' + + optionalString (libc != null) ('' ## ## General libc support ## @@ -253,11 +253,17 @@ stdenv.mkDerivation { # compile, because it uses "#include_next <limits.h>" to find the # limits.h file in ../includes-fixed. To remedy the problem, # another -idirafter is necessary to add that directory again. - echo "-B${libc_lib}${libc.libdir or "/lib/"} -idirafter ${libc_dev}${libc.incdir or "/include"} ${optionalString isGNU "-idirafter ${cc}/lib/gcc/*/*/include-fixed"}" > $out/nix-support/libc-cflags + echo "-B${libc_lib}${libc.libdir or "/lib/"}" >> $out/nix-support/libc-cflags + echo "-idirafter ${libc_dev}${libc.incdir or "/include"}" >> $out/nix-support/libc-cflags + '' + optionalString isGNU '' + for dir in "${cc}"/lib/gcc/*/*/include-fixed; do + echo '-idirafter' ''${dir} >> $out/nix-support/libc-cflags + done + '' + '' echo "${libc_lib}" > $out/nix-support/orig-libc echo "${libc_dev}" > $out/nix-support/orig-libc-dev - '' + '') + optionalString (!nativeTools) '' ## diff --git a/pkgs/build-support/docker/default.nix b/pkgs/build-support/docker/default.nix index 37b25232b96..e10ff269950 100644 --- a/pkgs/build-support/docker/default.nix +++ b/pkgs/build-support/docker/default.nix @@ -287,10 +287,16 @@ rec { # unless there are more paths than $maxLayers. In that case, create # $maxLayers-1 for the most popular layers, and smush the remainaing # store paths in to one final layer. + # + # NOTE: the `closures` parameter is a list of closures to include. + # The TOP LEVEL store paths themselves will never be present in the + # resulting image. At this time (2019-12-16) none of these layers + # are appropriate to include, as they are all created as + # implementation details of dockerTools. mkManyPureLayers = { name, # Files to add to the layer. - closure, + closures, configJson, # Docker has a 125-layer maximum, we pick 100 to ensure there is # plenty of room for extension. @@ -303,10 +309,12 @@ rec { isExecutable = true; src = ./store-path-to-layer.sh; }; + + overallClosure = writeText "closure" (lib.concatStringsSep " " closures); in runCommand "${name}-granular-docker-layers" { inherit maxLayers; - paths = referencesByPopularity closure; + paths = referencesByPopularity overallClosure; nativeBuildInputs = [ jshon rsync tarsum ]; enableParallelBuilding = true; } @@ -317,15 +325,20 @@ rec { | jshon -d config \ | jshon -s "1970-01-01T00:00:01Z" -i created > generic.json + # WARNING! # The following code is fiddly w.r.t. ensuring every layer is # created, and that no paths are missed. If you change the # following head and tail call lines, double-check that your # code behaves properly when the number of layers equals: # maxLayers-1, maxLayers, and maxLayers+1 - head -n $((maxLayers - 1)) $paths | cat -n | xargs -P$NIX_BUILD_CORES -n2 ${storePathToLayer} - if [ $(cat $paths | wc -l) -ge $maxLayers ]; then - tail -n+$maxLayers $paths | xargs ${storePathToLayer} $maxLayers + paths() { + cat $paths ${lib.concatMapStringsSep " " (path: "| grep -v ${path}") (closures ++ [ overallClosure ])} + } + + paths | head -n $((maxLayers - 1)) | cat -n | xargs -P$NIX_BUILD_CORES -n2 ${storePathToLayer} + if [ $(paths | wc -l) -ge $maxLayers ]; then + paths | tail -n+$maxLayers | xargs ${storePathToLayer} $maxLayers fi echo "Finished building layer '$name'" @@ -528,15 +541,18 @@ rec { created ? "1970-01-01T00:00:01Z", # Optional bash script to run on the files prior to fixturizing the layer. extraCommands ? "", uid ? 0, gid ? 0, - # Docker's lowest maximum layer limit is 42-layers for an old - # version of the AUFS graph driver. We pick 24 to ensure there is - # plenty of room for extension. I believe the actual maximum is - # 128. - maxLayers ? 24 + # We pick 100 to ensure there is plenty of room for extension. I + # believe the actual maximum is 128. + maxLayers ? 100 }: let baseName = baseNameOf name; - contentsEnv = symlinkJoin { name = "bulk-layers"; paths = (if builtins.isList contents then contents else [ contents ]); }; + contentsEnv = symlinkJoin { + name = "bulk-layers"; + paths = if builtins.isList contents + then contents + else [ contents ]; + }; configJson = let pure = writeText "${baseName}-config.json" (builtins.toJSON { @@ -553,7 +569,7 @@ rec { bulkLayers = mkManyPureLayers { name = baseName; - closure = writeText "closure" "${contentsEnv} ${configJson}"; + closures = [ contentsEnv configJson ]; # One layer will be taken up by the customisationLayer, so # take up one less. maxLayers = maxLayers - 1; @@ -845,6 +861,9 @@ rec { echo " be better to only have one layer that contains a nix store." export NIX_REMOTE=local?root=$PWD + # A user is required by nix + # https://github.com/NixOS/nix/blob/9348f9291e5d9e4ba3c4347ea1b235640f54fd79/src/libutil/util.cc#L478 + export USER=nobody ${nix}/bin/nix-store --load-db < ${closureInfo {rootPaths = contentsList;}}/registration mkdir -p nix/var/nix/gcroots/docker/ diff --git a/pkgs/build-support/docker/examples.nix b/pkgs/build-support/docker/examples.nix index 29eea33a7e1..d7d1a693310 100644 --- a/pkgs/build-support/docker/examples.nix +++ b/pkgs/build-support/docker/examples.nix @@ -117,7 +117,12 @@ rec { pkgs.nix ]; config = { - Env = [ "NIX_PAGER=cat" ]; + Env = [ + "NIX_PAGER=cat" + # A user is required by nix + # https://github.com/NixOS/nix/blob/9348f9291e5d9e4ba3c4347ea1b235640f54fd79/src/libutil/util.cc#L478 + "USER=nobody" + ]; }; }; @@ -231,7 +236,6 @@ rec { name = "another-layered-image"; tag = "latest"; config.Cmd = [ "${pkgs.hello}/bin/hello" ]; - contents = [ pkgs.hello ]; }; } diff --git a/pkgs/build-support/fetchgitiles/default.nix b/pkgs/build-support/fetchgitiles/default.nix new file mode 100644 index 00000000000..827680992d6 --- /dev/null +++ b/pkgs/build-support/fetchgitiles/default.nix @@ -0,0 +1,10 @@ +{ fetchzip, lib }: + +{ url, rev, name ? "source", ... } @ args: + +fetchzip ({ + inherit name; + url = "${url}/+archive/${rev}.tar.gz"; + stripRoot = false; + meta.homepage = url; +} // removeAttrs args [ "url" "rev" ]) // { inherit rev; } diff --git a/pkgs/build-support/fetchgitlab/default.nix b/pkgs/build-support/fetchgitlab/default.nix index be110cf8393..6c4d52a0533 100644 --- a/pkgs/build-support/fetchgitlab/default.nix +++ b/pkgs/build-support/fetchgitlab/default.nix @@ -3,8 +3,19 @@ # gitlab example { owner, repo, rev, domain ? "gitlab.com", name ? "source", group ? null , ... # For hash agility -}@args: fetchzip ({ +} @ args: + +with lib; + +let + slug = concatStringsSep "/" + ((optional (group != null) group) ++ [ owner repo ]); + + escapedSlug = replaceStrings ["." "/"] ["%2E" "%2F"] slug; +in + +fetchzip ({ inherit name; - url = "https://${domain}/api/v4/projects/${lib.optionalString (group != null) "${lib.replaceStrings ["."] ["%2E"] group}%2F"}${lib.replaceStrings ["."] ["%2E"] owner}%2F${lib.replaceStrings ["."] ["%2E"] repo}/repository/archive.tar.gz?sha=${rev}"; - meta.homepage = "https://${domain}/${lib.optionalString (group != null) "${group}/"}${owner}/${repo}/"; + url = "https://${domain}/api/v4/projects/${escapedSlug}/repository/archive.tar.gz?sha=${rev}"; + meta.homepage = "https://${domain}/${slug}/"; } // removeAttrs args [ "domain" "owner" "group" "repo" "rev" ]) // { inherit rev; } diff --git a/pkgs/build-support/kernel/modules-closure.sh b/pkgs/build-support/kernel/modules-closure.sh index 5658094872c..220f3b00a77 100644 --- a/pkgs/build-support/kernel/modules-closure.sh +++ b/pkgs/build-support/kernel/modules-closure.sh @@ -56,4 +56,12 @@ for module in $closure; do done done +# copy module ordering hints for depmod +cp $kernel/lib/modules/"$version"/modules.order $out/lib/modules/"$version"/. +cp $kernel/lib/modules/"$version"/modules.builtin $out/lib/modules/"$version"/. + depmod -b $out -a $version + +# remove original hints from final derivation +rm $out/lib/modules/"$version"/modules.order +rm $out/lib/modules/"$version"/modules.builtin diff --git a/pkgs/build-support/libredirect/libredirect.c b/pkgs/build-support/libredirect/libredirect.c index 8e8da00b02a..d31b7551e94 100644 --- a/pkgs/build-support/libredirect/libredirect.c +++ b/pkgs/build-support/libredirect/libredirect.c @@ -59,6 +59,11 @@ static const char * rewrite(const char * path, char * buf) return path; } +static int open_needs_mode(int flags) +{ + return (flags & O_CREAT) || (flags & O_TMPFILE) == O_TMPFILE; +} + /* The following set of Glibc library functions is very incomplete - it contains only what we needed for programs in Nixpkgs. Just add more functions as needed. */ @@ -67,7 +72,7 @@ int open(const char * path, int flags, ...) { int (*open_real) (const char *, int, mode_t) = dlsym(RTLD_NEXT, "open"); mode_t mode = 0; - if (flags & O_CREAT) { + if (open_needs_mode(flags)) { va_list ap; va_start(ap, flags); mode = va_arg(ap, mode_t); @@ -81,7 +86,7 @@ int open64(const char * path, int flags, ...) { int (*open64_real) (const char *, int, mode_t) = dlsym(RTLD_NEXT, "open64"); mode_t mode = 0; - if (flags & O_CREAT) { + if (open_needs_mode(flags)) { va_list ap; va_start(ap, flags); mode = va_arg(ap, mode_t); @@ -95,7 +100,7 @@ int openat(int dirfd, const char * path, int flags, ...) { int (*openat_real) (int, const char *, int, mode_t) = dlsym(RTLD_NEXT, "openat"); mode_t mode = 0; - if (flags & O_CREAT) { + if (open_needs_mode(flags)) { va_list ap; va_start(ap, flags); mode = va_arg(ap, mode_t); @@ -140,9 +145,9 @@ int stat(const char * path, struct stat * st) return __stat_real(rewrite(path, buf), st); } -int * access(const char * path, int mode) +int access(const char * path, int mode) { - int * (*access_real) (const char *, int mode) = dlsym(RTLD_NEXT, "access"); + int (*access_real) (const char *, int mode) = dlsym(RTLD_NEXT, "access"); char buf[PATH_MAX]; return access_real(rewrite(path, buf), mode); } diff --git a/pkgs/build-support/make-desktopitem/default.nix b/pkgs/build-support/make-desktopitem/default.nix index f8c31ed5c1d..67b82fd66db 100644 --- a/pkgs/build-support/make-desktopitem/default.nix +++ b/pkgs/build-support/make-desktopitem/default.nix @@ -1,4 +1,4 @@ -{stdenv, lib}: +{ lib, runCommandLocal }: { name , type ? "Application" , exec @@ -13,24 +13,20 @@ , extraEntries ? null }: -stdenv.mkDerivation { - name = "${name}.desktop"; +let + optionalEntriesList = [{k="Icon"; v=icon;} + {k="Comment"; v=comment;} + {k="GenericName"; v=genericName;} + {k="MimeType"; v=mimeType;} + {k="StartupNotify"; v=startupNotify;}]; - buildCommand = let + valueNotNull = {k, v}: v != null; + entriesToKeep = builtins.filter valueNotNull optionalEntriesList; - optionalEntriesList = [{k="Icon"; v=icon;} - {k="Comment"; v=comment;} - {k="GenericName"; v=genericName;} - {k="MimeType"; v=mimeType;} - {k="StartupNotify"; v=startupNotify;}]; - - valueNotNull = {k, v}: v != null; - entriesToKeep = builtins.filter valueNotNull optionalEntriesList; - - mkEntry = {k, v}: k + "=" + v; - optionalEntriesString = lib.concatMapStringsSep "\n" mkEntry entriesToKeep; - - in + mkEntry = {k, v}: k + "=" + v; + optionalEntriesString = lib.concatMapStringsSep "\n" mkEntry entriesToKeep; +in +runCommandLocal "${name}.desktop" {} '' mkdir -p $out/share/applications cat > $out/share/applications/${name}.desktop <<EOF @@ -44,5 +40,4 @@ stdenv.mkDerivation { ${if extraEntries == null then ''EOF'' else '' ${extraEntries} EOF''} - ''; -} + '' diff --git a/pkgs/build-support/setup-hooks/wrap-gapps-hook.sh b/pkgs/build-support/setup-hooks/wrap-gapps-hook.sh index a05d4f689db..ff0cda7eaf0 100644 --- a/pkgs/build-support/setup-hooks/wrap-gapps-hook.sh +++ b/pkgs/build-support/setup-hooks/wrap-gapps-hook.sh @@ -42,7 +42,9 @@ wrapGAppsHook() { fi for v in ${wrapPrefixVariables:-} GST_PLUGIN_SYSTEM_PATH_1_0 GI_TYPELIB_PATH GRL_PLUGIN_PATH; do - gappsWrapperArgs+=(--prefix "$v" : "${!v}") + if [ -n "${!v}" ]; then + gappsWrapperArgs+=(--prefix "$v" : "${!v}") + fi done if [[ -z "${dontWrapGApps:-}" ]]; then diff --git a/pkgs/build-support/skaware/build-skaware-package.nix b/pkgs/build-support/skaware/build-skaware-package.nix index 9b159a994c8..9e4456a3a15 100644 --- a/pkgs/build-support/skaware/build-skaware-package.nix +++ b/pkgs/build-support/skaware/build-skaware-package.nix @@ -18,12 +18,15 @@ in { , configureFlags # mostly for moving and deleting files from the build directory # : lines -, postInstall +, postInstall ? "" + # : lines +, postFixup ? "" # : list Maintainer , maintainers ? [] - - -}: + # : attrs +, meta ? {} +, ... +} @ args: let @@ -50,16 +53,12 @@ let "README.*" ]; -in stdenv.mkDerivation { - name = "${pname}-${version}"; - +in stdenv.mkDerivation ({ src = fetchurl { url = "https://skarnet.org/software/${pname}/${pname}-${version}.tar.gz"; inherit sha256; }; - inherit outputs; - dontDisableStatic = true; enableParallelBuilding = true; @@ -84,13 +83,11 @@ in stdenv.mkDerivation { noiseFiles = commonNoiseFiles; docFiles = commonMetaFiles; }} $doc/share/doc/${pname} - - ${postInstall} - ''; + '' + postInstall; postFixup = '' ${cleanPackaging.checkForRemainingFiles} - ''; + '' + postFixup; meta = { homepage = "https://skarnet.org/software/${pname}/"; @@ -98,6 +95,9 @@ in stdenv.mkDerivation { license = stdenv.lib.licenses.isc; maintainers = with lib.maintainers; [ pmahoney Profpatsch ] ++ maintainers; - }; + } // meta; -} +} // builtins.removeAttrs args [ + "sha256" "configureFlags" "postInstall" "postFixup" + "meta" "description" "platforms" "maintainers" +]) diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix index 335cab7c45e..a7050f52e52 100644 --- a/pkgs/build-support/vm/default.nix +++ b/pkgs/build-support/vm/default.nix @@ -430,7 +430,7 @@ rec { set +o pipefail for i in $rpms; do echo "$i..." - ${rpm}/bin/rpm2cpio "$i" | chroot /mnt ${cpio}/bin/cpio -i --make-directories --unconditional --extract-over-symlinks + ${rpm}/bin/rpm2cpio "$i" | chroot /mnt ${cpio}/bin/cpio -i --make-directories --unconditional done eval "$preInstall" diff --git a/pkgs/build-support/writers/default.nix b/pkgs/build-support/writers/default.nix index 2cd4f1af022..b90c6490e4a 100644 --- a/pkgs/build-support/writers/default.nix +++ b/pkgs/build-support/writers/default.nix @@ -148,6 +148,7 @@ rec { cp $contentPath tmp.hs ${ghc.withPackages (_: libraries )}/bin/ghc tmp.hs mv tmp $out + ${pkgs.binutils-unwrapped}/bin/strip --strip-unneeded "$out" ''; } name; diff --git a/pkgs/data/fonts/cascadia-code/default.nix b/pkgs/data/fonts/cascadia-code/default.nix index 105b5da3105..c89d4c6dfd4 100644 --- a/pkgs/data/fonts/cascadia-code/default.nix +++ b/pkgs/data/fonts/cascadia-code/default.nix @@ -2,7 +2,7 @@ let pname = "cascadia-code"; - version = "1911.20"; + version = "1911.21"; in fetchurl { name = "${pname}-${version}"; @@ -15,7 +15,7 @@ fetchurl { install -Dm444 $downloadedFile $out/share/fonts/truetype/Cascadia.ttf ''; - sha256 = "1dfd3g7cf2h0z2gxvk4pxy46xswd3wyqz3p8ypxcv2dkz4ri6l0j"; + sha256 = "0b41xkpqx4ybpw5ar8njy0yznbk0hwf1ypigxf8f16chsfim7dkr"; meta = with lib; { description = "Monospaced font that includes programming ligatures and is designed to enhance the modern look and feel of the Windows Terminal"; diff --git a/pkgs/data/fonts/gubbi/default.nix b/pkgs/data/fonts/gubbi/default.nix new file mode 100644 index 00000000000..2d1c520e610 --- /dev/null +++ b/pkgs/data/fonts/gubbi/default.nix @@ -0,0 +1,29 @@ +{ stdenv, fetchFromGitHub, fontforge }: + +stdenv.mkDerivation rec { + pname = "gubbi-font"; + version = "1.3"; + + src = fetchFromGitHub { + owner = "aravindavk"; + repo = "gubbi"; + rev = "v${version}"; + sha256 = "10w9i3pmjvs1b3xclrgn4q5a95ss4ipldbxbqrys2dmfivx7i994"; + }; + + nativeBuildInputs = [ fontforge ]; + + dontConfigure = true; + + preBuild = "patchShebangs generate.pe"; + + installPhase = "install -Dm444 -t $out/share/fonts/truetype/ Gubbi.ttf"; + + meta = with stdenv.lib; { + inherit (src.meta) homepage; + description = "A Kannada font"; + license = licenses.gpl3Plus; + platforms = platforms.all; + maintainers = with maintainers; [ ehmry ]; + }; +} diff --git a/pkgs/data/fonts/ibm-plex/default.nix b/pkgs/data/fonts/ibm-plex/default.nix index cd868d88d65..ffd6a49be5c 100644 --- a/pkgs/data/fonts/ibm-plex/default.nix +++ b/pkgs/data/fonts/ibm-plex/default.nix @@ -1,7 +1,7 @@ { lib, fetchzip }: let - version = "4.0.1"; + version = "4.0.2"; in fetchzip { name = "ibm-plex-${version}"; url = "https://github.com/IBM/plex/releases/download/v${version}/OpenType.zip"; @@ -9,7 +9,7 @@ in fetchzip { mkdir -p $out/share/fonts unzip -j $downloadedFile "OpenType/*/*.otf" -d $out/share/fonts/opentype ''; - sha256 = "11d5bsv7d5rbp9f1gf1l4za3xj6jlqwnvsl5ipwx4angh1kb7nk8"; + sha256 = "1v00y1l9sjcv9w8d3115w1vv1b7bgwbrv4d3zv68galk8wz8px1x"; meta = with lib; { description = "IBM Plex Typeface"; diff --git a/pkgs/data/fonts/spleen/default.nix b/pkgs/data/fonts/spleen/default.nix index c5dfc1e156f..3e843e30f5e 100644 --- a/pkgs/data/fonts/spleen/default.nix +++ b/pkgs/data/fonts/spleen/default.nix @@ -2,7 +2,7 @@ let pname = "spleen"; - version = "1.5.0"; + version = "1.6.0"; in fetchurl { name = "${pname}-${version}"; url = "https://github.com/fcambus/spleen/releases/download/${version}/spleen-${version}.tar.gz"; @@ -18,7 +18,7 @@ in fetchurl { # create fonts.dir so NixOS xorg module adds to fp ${mkfontdir}/bin/mkfontdir $d ''; - sha256 = "13ndyw1m6c778k7jr7qwbfg28gqmpcgksprn2mjgsv75wvy51z19"; + sha256 = "0h9gj7syn87hl5rhwckih92r228zac6b1dvh3034caml8ad3fyla"; meta = with lib; { description = "Monospaced bitmap fonts"; diff --git a/pkgs/data/fonts/uw-ttyp0/default.nix b/pkgs/data/fonts/uw-ttyp0/default.nix new file mode 100644 index 00000000000..eae820fb0d1 --- /dev/null +++ b/pkgs/data/fonts/uw-ttyp0/default.nix @@ -0,0 +1,78 @@ +{ stdenv, fetchurl, perl +, bdftopcf, bdf2psf, mkfontdir +, fonttosfnt +, targetsDat ? null +, variantsDat ? null +}: + +stdenv.mkDerivation rec { + pname = "uw-ttyp0"; + version = "1.3"; + + src = fetchurl { + url = "https://people.mpi-inf.mpg.de/~uwe/misc/${pname}/${pname}-${version}.tar.gz"; + sha256 = "1vp053bwv8sr40p3pn4sjaiq570zp7knh99z9ynk30v7ml4cz2i8"; + }; + + # remove for version >1.3 + patches = [ ./determinism.patch ]; + + nativeBuildInputs = [ perl bdftopcf bdf2psf fonttosfnt mkfontdir ]; + + outputHashAlgo = "sha256"; + outputHashMode = "recursive"; + outputHash = "0hzhaakbbcnz5ksi5p8mavw9578rsqlqadkrirrkhfnyqqlrii4j"; + + # configure sizes, encodings and variants + preConfigure = + (if targetsDat == null + then '' + cat << EOF > TARGETS.dat + SIZES = 11 12 13 14 15 16 17 18 22 \ + 11b 12b 13b 14b 15b 16b 17b 18b 22b 15i 16i 17i 18i + ENCODINGS = uni + EOF + '' + else ''cp "${targetsDat}" TARGETS.dat'') + + (if variantsDat == null + then '' + cat << EOF > VARIANTS.dat + COPYTO AccStress PApostropheAscii + COPYTO PAmComma AccGraveAscii + COPYTO Digit0Slashed Digit0 + EOF + '' + else ''cp "${variantsDat}" VARIANTS.dat''); + + postBuild = '' + # convert bdf to psf and otb fonts + build=$(pwd) + mkdir {psf,otb} + cd ${bdf2psf}/share/bdf2psf + for i in $build/genbdf/*.bdf; do + name="$(basename $i .bdf)" + bdf2psf \ + --fb "$i" standard.equivalents \ + ascii.set+useful.set+linux.set 512 \ + "$build/psf/$name.psf" + fonttosfnt -v -o "$build/otb/$name.otb" "$i" + done + cd $build + ''; + + postInstall = '' + # install psf fonts + fontDir="$out/share/consolefonts" + mkdir -p "$fontDir" + mv -t "$fontDir" psf/*.psf + mv -t "$out/share/fonts/X11/misc" otb/*.otb + ''; + + meta = with stdenv.lib; { + description = "Monospace bitmap screen fonts for X11"; + homepage = https://people.mpi-inf.mpg.de/~uwe/misc/uw-ttyp0/; + license = with licenses; [ free mit ]; + maintainers = with maintainers; [ rnhmjoj ]; + }; + +} diff --git a/pkgs/data/fonts/uw-ttyp0/determinism.patch b/pkgs/data/fonts/uw-ttyp0/determinism.patch new file mode 100644 index 00000000000..8546ad35933 --- /dev/null +++ b/pkgs/data/fonts/uw-ttyp0/determinism.patch @@ -0,0 +1,13 @@ +diff --git a/Makefile.in b/Makefile.in +index b9736cd..5740412 100644 +--- a/Makefile.in ++++ b/Makefile.in +@@ -76,7 +76,7 @@ bdf : $(bdf) + + genpcf/%.pcf.gz : genbdf/%.bdf + $(BDFTOPCF) $< > $(@:.pcf.gz=.pcf) +- gzip -9 -f $(@:.pcf.gz=.pcf) ++ gzip -n -9 -f $(@:.pcf.gz=.pcf) + + genbdf/t0-11-uni.bdf : bdf/t0-11.bdf bdf/t0-12.bdf VARIANTS.dat mgl/unicode.mgl + $(MKSHALLOW) bdf/t0-12.bdf | cat - bdf/t0-11.bdf | $(BDFMANGLE) - VARIANTS.dat mgl/unicode.mgl > $@ diff --git a/pkgs/data/icons/papirus-icon-theme/default.nix b/pkgs/data/icons/papirus-icon-theme/default.nix index 88611faa308..c4092e3d858 100644 --- a/pkgs/data/icons/papirus-icon-theme/default.nix +++ b/pkgs/data/icons/papirus-icon-theme/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "papirus-icon-theme"; - version = "20191101"; + version = "20191201"; src = fetchFromGitHub { owner = "PapirusDevelopmentTeam"; repo = pname; rev = version; - sha256 = "17as9i5b9wqzvj08hwxqk9dlv6hrvkylns85s8gzhv6b5x2q5ma3"; + sha256 = "02bkd9gx9z14x5gjhpwchhhngiigzvb51a4z67aqfdnmqirv102n"; }; nativeBuildInputs = [ gtk3 ]; diff --git a/pkgs/data/misc/cldr-emoji-annotation/default.nix b/pkgs/data/misc/cldr-emoji-annotation/default.nix new file mode 100644 index 00000000000..4279cf8aec4 --- /dev/null +++ b/pkgs/data/misc/cldr-emoji-annotation/default.nix @@ -0,0 +1,27 @@ +{ stdenv +, fetchFromGitHub +, autoreconfHook +}: + +stdenv.mkDerivation rec { + pname = "cldr-emoji-annotation"; + version = "36.12.120191002_0"; + + src = fetchFromGitHub { + owner = "fujiwarat"; + repo = "cldr-emoji-annotation"; + rev = version; + sha256 = "0nxigzs3mxjgi7c8mmdaxsy5sfl7ihsc2nysaj0db198b33w9clw"; + }; + + nativeBuildInputs = [ + autoreconfHook + ]; + + meta = with stdenv.lib; { + description = "Emoji annotation files in CLDR"; + homepage = "https://www.unicode.org/"; + license = licenses.free; # https://www.unicode.org/license.html + platforms = platforms.all; + }; +} diff --git a/pkgs/data/misc/unicode-character-database/default.nix b/pkgs/data/misc/unicode-character-database/default.nix new file mode 100644 index 00000000000..5f50049856f --- /dev/null +++ b/pkgs/data/misc/unicode-character-database/default.nix @@ -0,0 +1,38 @@ +{ stdenv +, fetchurl +, unzip +}: + +stdenv.mkDerivation rec { + pname = "unicode-character-database"; + version = "12.1.0"; + + src = fetchurl { + url = "https://www.unicode.org/Public/zipped/${version}/UCD.zip"; + sha256 = "19m06iw0jl7lhlggcmghi12p6jld0qrmfpksgc243yn6sjh53fi5"; + }; + + nativeBuildInputs = [ + unzip + ]; + + setSourceRoot = '' + sourceRoot=$PWD + ''; + + installPhase = '' + runHook preInstall + + mkdir -p $out/share/unicode + cp -r * $out/share/unicode + + runHook postInstall + ''; + + meta = with stdenv.lib; { + description = "Unicode Character Database"; + homepage = "https://www.unicode.org/"; + license = licenses.free; # https://www.unicode.org/license.html + platforms = platforms.all; + }; +} diff --git a/pkgs/data/misc/unicode-emoji/default.nix b/pkgs/data/misc/unicode-emoji/default.nix new file mode 100644 index 00000000000..05472b26d88 --- /dev/null +++ b/pkgs/data/misc/unicode-emoji/default.nix @@ -0,0 +1,59 @@ +{ stdenv +, fetchurl +, symlinkJoin +, lib +}: + +let + version = "12.1"; + + fetchData = { file, sha256 }: fetchurl { + url = "https://www.unicode.org/Public/emoji/${version}/${file}"; + inherit sha256; + downloadToTemp = true; + recursiveHash = true; + postFetch = '' + installDir="$out/share/unicode/emoji" + mkdir -p "$installDir" + mv "$downloadedFile" "$installDir/${file}" + ''; + }; + + srcs = { + emoji-data = fetchData { + file = "emoji-data.txt"; + sha256 = "17gfm5a28lsymx36prbjy2g0b27gf3rcgggy0yxdshbxwf6zpf9k"; + }; + emoji-sequences = fetchData { + file = "emoji-sequences.txt"; + sha256 = "1fckw5hfyvz5jfp2jczzx8qcs79vf0zyq0z2942230j99arq70vc"; + }; + emoji-test = fetchData { + file = "emoji-test.txt"; + sha256 = "0w29lva7gp9g9lf7bz1i24qdalvf440bcq8npsbwr3cpp7na95kh"; + }; + emoji-variation-sequences = fetchData { + file = "emoji-variation-sequences.txt"; + sha256 = "0akpib3cinr8xcs045hda5wnpfj6qfdjlkzmq5vgdc50gyhrd2z3"; + }; + emoji-zwj-sequences = fetchData { + file = "emoji-zwj-sequences.txt"; + sha256 = "0s2mvy1nr2v1x0rr1fxlsv8ly1vyf9978rb4hwry5vnr678ls522"; + }; + }; +in + +symlinkJoin rec { + name = "unicode-emoji-${version}"; + + paths = lib.attrValues srcs; + + passthru = srcs; + + meta = with stdenv.lib; { + description = "Unicode Emoji Data Files"; + homepage = "https://home.unicode.org/emoji/"; + license = licenses.free; # https://www.unicode.org/license.html + platforms = platforms.all; + }; +} diff --git a/pkgs/data/misc/unihan-database/default.nix b/pkgs/data/misc/unihan-database/default.nix new file mode 100644 index 00000000000..77da77242a9 --- /dev/null +++ b/pkgs/data/misc/unihan-database/default.nix @@ -0,0 +1,38 @@ +{ stdenv +, fetchurl +, unzip +}: + +stdenv.mkDerivation rec { + pname = "unihan-database"; + version = "12.1.0"; + + src = fetchurl { + url = "https://www.unicode.org/Public/zipped/${version}/Unihan.zip"; + sha256 = "1kfdhgg2gm52x3s07bijb5cxjy0jxwhd097k5lqhvzpznprm6ibf"; + }; + + nativeBuildInputs = [ + unzip + ]; + + setSourceRoot = '' + sourceRoot=$PWD + ''; + + installPhase = '' + runHook preInstall + + mkdir -p $out/share/unicode + cp -r * $out/share/unicode + + runHook postInstall + ''; + + meta = with stdenv.lib; { + description = "Unicode Han Database"; + homepage = "https://www.unicode.org/"; + license = licenses.free; # https://www.unicode.org/license.html + platforms = platforms.all; + }; +} diff --git a/pkgs/data/themes/mojave/default.nix b/pkgs/data/themes/mojave/default.nix index 714e026d32c..6c38e3aaba4 100644 --- a/pkgs/data/themes/mojave/default.nix +++ b/pkgs/data/themes/mojave/default.nix @@ -1,15 +1,23 @@ -{ stdenv, fetchFromGitHub, gtk_engines, gtk-engine-murrine }: +{ stdenv, fetchFromGitHub, fetchurl, gtk_engines, gtk-engine-murrine }: stdenv.mkDerivation rec { pname = "mojave-gtk-theme"; - version = "2019-09-09"; + version = "2019-12-12"; - src = fetchFromGitHub { - owner = "vinceliuice"; - repo = pname; - rev = version; - sha256 = "1qffh6jsvy61f29ymw1v9hpjnsvhqin19mp05cys1lnwc7y810zr"; - }; + srcs = [ + (fetchFromGitHub { + owner = "vinceliuice"; + repo = pname; + rev = version; + sha256 = "0d5m9gh97db01ygqlp2sv9v1m183d9fgid9n9wms9r5rrrw6bs8m"; + }) + (fetchurl { + url = "https://github.com/vinceliuice/Mojave-gtk-theme/raw/11741a99d96953daf9c27e44c94ae50a7247c0ed/macOS_Mojave_Wallpapers.tar.xz"; + sha256 = "18zzkwm1kqzsdaj8swf0xby1n65gxnyslpw4lnxcx1rphip0rwf7"; + }) + ]; + + sourceRoot = "source"; buildInputs = [ gtk_engines ]; @@ -17,8 +25,8 @@ stdenv.mkDerivation rec { installPhase = '' patchShebangs . - mkdir -p $out/share/themes name= ./install.sh -d $out/share/themes + install -D -t $out/share/wallpapers ../"macOS Mojave Wallpapers"/* ''; meta = with stdenv.lib; { diff --git a/pkgs/data/themes/sierra/default.nix b/pkgs/data/themes/sierra/default.nix index e5b5ad8d611..0c9cef9e097 100644 --- a/pkgs/data/themes/sierra/default.nix +++ b/pkgs/data/themes/sierra/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "sierra-gtk-theme"; - version = "2019-05-07"; + version = "2019-12-16"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; rev = version; - sha256 = "0rm9lcwp89ljxqrya9bi882qcs339pc1l945cr1xq2rganqyk9cq"; + sha256 = "14hlz8kbrjypyd6wyrwmnj2wm9w3kc8y00ms35ard7x8lmhs56hr"; }; nativeBuildInputs = [ libxml2 ]; diff --git a/pkgs/data/themes/sweet/default.nix b/pkgs/data/themes/sweet/default.nix new file mode 100644 index 00000000000..9d3603cbf52 --- /dev/null +++ b/pkgs/data/themes/sweet/default.nix @@ -0,0 +1,47 @@ +{ stdenv, fetchurl, unzip }: + +stdenv.mkDerivation rec { + pname = "sweet"; + version = "1.10.5"; + + srcs = [ + (fetchurl { + url = "https://github.com/EliverLara/Sweet/releases/download/v${version}/Sweet-Ambar-Blue.zip"; + sha256 = "11040hx8ci4vbnyaj63zj924v0ln7rjm9a28mcqdax60h3dp12lj"; + }) + (fetchurl { + url = "https://github.com/EliverLara/Sweet/releases/download/v${version}/Sweet-Ambar.zip"; + sha256 = "0lvnjmirpwdav8q0bfbhybwkr2h6dilc7lhhj18xd2k57xadjmxr"; + }) + (fetchurl { + url = "https://github.com/EliverLara/Sweet/releases/download/v${version}/Sweet-Dark.zip"; + sha256 = "0a7mh1pgvi8w1ahsmvgnmpdawm30lcjqk4zqvg0lqadsd04dn4h1"; + }) + (fetchurl { + url = "https://github.com/EliverLara/Sweet/releases/download/v${version}/Sweet-mars.zip"; + sha256 = "0n2dkl35qrik10wvhvkayyra987p03g56pxhz5kc73cbsl5zd96l"; + }) + (fetchurl { + url = "https://github.com/EliverLara/Sweet/releases/download/v${version}/Sweet.zip"; + sha256 = "0wwmc3wj2pjg4kimfkvcsimk3s4s7l7k000vxqi8yjlfs70f273c"; + }) + ]; + + nativeBuildInputs = [ unzip ]; + + sourceRoot = "."; + + installPhase = '' + mkdir -p $out/share/themes/ + cp -a Sweet* $out/share/themes/ + rm $out/share/themes/*/{LICENSE,README*} + ''; + + meta = with stdenv.lib; { + description = "Light and dark colorful Gtk3.20+ theme"; + homepage = "https://github.com/EliverLara/Sweet"; + license = licenses.gpl3; + maintainers = with maintainers; [ fuzen ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/desktops/cinnamon/default.nix b/pkgs/desktops/cinnamon/default.nix new file mode 100644 index 00000000000..44589078241 --- /dev/null +++ b/pkgs/desktops/cinnamon/default.nix @@ -0,0 +1,5 @@ +{ pkgs, lib }: + +lib.makeScope pkgs.newScope (self: with self; { + xapps = callPackage ./xapps {}; +}) diff --git a/pkgs/desktops/cinnamon/xapps/default.nix b/pkgs/desktops/cinnamon/xapps/default.nix new file mode 100644 index 00000000000..f63ab3cedd8 --- /dev/null +++ b/pkgs/desktops/cinnamon/xapps/default.nix @@ -0,0 +1,104 @@ +{ fetchFromGitHub +, fetchpatch +, glib +, gobject-introspection +, gtk3 +, libgnomekbd +, gdk-pixbuf +, cairo +, xorg +, meson +, ninja +, pkgconfig +, python3 +, stdenv +, vala +, wrapGAppsHook +, inxi +, mate +}: + +stdenv.mkDerivation rec { + pname = "xapps"; + version = "1.6.8"; + + outputs = [ "out" "dev" ]; + + src = fetchFromGitHub { + owner = "linuxmint"; + repo = pname; + rev = version; + sha256 = "09f77vsydv8r6r43py8hrpq7pb4a1pfivy19zgijjy2241i7059v"; + }; + + # TODO: https://github.com/NixOS/nixpkgs/issues/36468 + NIX_CFLAGS_COMPILE = [ + "-I${glib.dev}/include/gio-unix-2.0" + ]; + + patches = [ + (fetchpatch { # details see https://github.com/linuxmint/xapps/pull/65 + url = "https://github.com/linuxmint/xapps/compare/d361d9cf357fade59b4bb68df2dcb2c0c39f90e1...2dfe82ec68981ea046345b2be349bd56293579f7.diff"; + sha256 = "0sffclamvjas8ad57kxrg0vrgrd95xsk0xdl53dc3yivpxkfxrnk"; + }) + ]; + + nativeBuildInputs = [ + gobject-introspection + meson + ninja + pkgconfig + python3 + vala + wrapGAppsHook + ]; + + buildInputs = [ + (python3.withPackages(ps: with ps; [ + pygobject3 + setproctitle # mate applet + ])) + libgnomekbd + gdk-pixbuf + xorg.libxkbfile + python3.pkgs.pygobject3 # for .pc file + mate.mate-panel # for gobject-introspection + ]; + + # Requires in xapp.pc + propagatedBuildInputs = [ + gtk3 + cairo + glib + ]; + + mesonFlags = [ + "-Dpy-overrides-dir=${placeholder "out"}/${python3.sitePackages}/gi/overrides" + ]; + + postPatch = '' + chmod +x schemas/meson_install_schemas.py # patchShebangs requires executable file + + # The fetchpatch hook removes the renames, so postPatch has to rename those files, remove once PR merged + mv files/usr/bin/pastebin scripts/pastebin + mv files/usr/bin/upload-system-info scripts/upload-system-info + mv files/usr/bin/xfce4-set-wallpaper scripts/xfce4-set-wallpaper + mv files/usr/share/icons/hicolor icons + + patchShebangs \ + libxapp/g-codegen.py \ + schemas/meson_install_schemas.py + + # Patch pastebin & inxi location + sed "s|/usr/bin/pastebin|$out/bin/pastebin|" -i scripts/upload-system-info + sed "s|'inxi'|'${inxi}/bin/inxi'|" -i scripts/upload-system-info + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/linuxmint/xapps"; + description = "Cross-desktop libraries and common resources"; + license = licenses.lgpl3; + platforms = platforms.linux; + maintainers = [ maintainers.mkg20001 ]; + }; +} diff --git a/pkgs/desktops/enlightenment/efl.nix b/pkgs/desktops/enlightenment/efl.nix index 976c6b1f32b..355cc58f348 100644 --- a/pkgs/desktops/enlightenment/efl.nix +++ b/pkgs/desktops/enlightenment/efl.nix @@ -10,11 +10,11 @@ stdenv.mkDerivation rec { pname = "efl"; - version = "1.23.2"; + version = "1.23.3"; src = fetchurl { url = "http://download.enlightenment.org/rel/libs/${pname}/${pname}-${version}.tar.xz"; - sha256 = "14yljnnmb89s8j6ip08ip5d01zkgzbzr1h4fr4bwk9lh8r59x3ds"; + sha256 = "00b9lp3h65254kdb1ys15fv7p3ln7qsvf15jkw4kli5ymagadkjk"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/apps/evolution/default.nix b/pkgs/desktops/gnome-3/apps/evolution/default.nix index 701f894939e..a8c5d93b88d 100644 --- a/pkgs/desktops/gnome-3/apps/evolution/default.nix +++ b/pkgs/desktops/gnome-3/apps/evolution/default.nix @@ -43,11 +43,11 @@ stdenv.mkDerivation rec { pname = "evolution"; - version = "3.34.1"; + version = "3.34.2"; src = fetchurl { url = "mirror://gnome/sources/evolution/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0hmxz3b9paqlpfjpqn379a8c01z3gb8lz0jgxxpgn6iygzfr4sk5"; + sha256 = "164vy8h432pjglafn8y2ms4gsvk3kbgc63h5qp0mk5dv4smsp29c"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix index 6770f3df850..f7f83b56932 100644 --- a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "gnome-desktop"; - version = "3.34.1"; + version = "3.34.2"; outputs = [ "out" "dev" "devdoc" ]; src = fetchurl { url = "mirror://gnome/sources/gnome-desktop/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0nnwc837k244gjsmx8wff5sfvm8xnhm8xr39qxk73lnscrbfpny1"; + sha256 = "1v983xirwp1y6ggz97bh742ak6gff0hxb359dgn37nikjxhvm0a0"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-session/default.nix b/pkgs/desktops/gnome-3/core/gnome-session/default.nix index 8aaf68ea1e3..d63435ce2e9 100644 --- a/pkgs/desktops/gnome-3/core/gnome-session/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-session/default.nix @@ -55,6 +55,7 @@ stdenv.mkDerivation rec { packageName = "gnome-session"; attrPath = "gnome3.gnome-session"; }; + providedSessions = [ "gnome" "gnome-xorg" ]; }; meta = with stdenv.lib; { diff --git a/pkgs/desktops/gnome-3/core/gnome-shell/default.nix b/pkgs/desktops/gnome-3/core/gnome-shell/default.nix index e8d5b7dbffd..e2d14ffcd26 100644 --- a/pkgs/desktops/gnome-3/core/gnome-shell/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-shell/default.nix @@ -15,11 +15,11 @@ let in stdenv.mkDerivation rec { pname = "gnome-shell"; - version = "3.34.1"; + version = "3.34.2"; src = fetchurl { url = "mirror://gnome/sources/gnome-shell/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "07kd7wdk12nba33jfr44xqdlryiy86wgvsyjs8cw55y8p5cnbn6c"; + sha256 = "0k9vq2gh1nhdd6fpp7jnwx37qxaakawiqw1xnlfjvq5g5zdn8ckh"; }; LANG = "en_US.UTF-8"; diff --git a/pkgs/desktops/gnome-3/core/gucharmap/default.nix b/pkgs/desktops/gnome-3/core/gucharmap/default.nix index 6c291c1874f..ce5e073ac06 100644 --- a/pkgs/desktops/gnome-3/core/gucharmap/default.nix +++ b/pkgs/desktops/gnome-3/core/gucharmap/default.nix @@ -1,11 +1,48 @@ -{ stdenv, intltool, fetchFromGitLab, pkgconfig, gtk3, adwaita-icon-theme -, glib, desktop-file-utils, gtk-doc, autoconf, automake, libtool -, wrapGAppsHook, gnome3, itstool, libxml2, yelp-tools -, docbook_xsl, docbook_xml_dtd_412, gsettings-desktop-schemas -, callPackage, unzip, gobject-introspection }: +{ stdenv +, intltool +, fetchFromGitLab +, fetchpatch +, pkgconfig +, gtk3 +, adwaita-icon-theme +, glib +, desktop-file-utils +, gtk-doc +, autoconf +, automake +, libtool +, wrapGAppsHook +, gnome3 +, itstool +, libxml2 +, yelp-tools +, docbook_xsl +, docbook_xml_dtd_412 +, gsettings-desktop-schemas +, callPackage +, unzip +, unicode-character-database +, unihan-database +, runCommand +, symlinkJoin +, gobject-introspection +}: let - unicode-data = callPackage ./unicode-data.nix {}; + # TODO: make upstream patch allowing to use the uncompressed file, + # preferably from XDG_DATA_DIRS. + # https://gitlab.gnome.org/GNOME/gucharmap/issues/13 + unihanZip = runCommand "unihan" {} '' + mkdir -p $out/share/unicode + ln -s ${unihan-database.src} $out/share/unicode/Unihan.zip + ''; + ucd = symlinkJoin { + name = "ucd+unihan"; + paths = [ + unihanZip + unicode-character-database + ]; + }; in stdenv.mkDerivation rec { pname = "gucharmap"; version = "12.0.1"; @@ -20,16 +57,41 @@ in stdenv.mkDerivation rec { sha256 = "0si3ymyfzc5v7ly0dmcs3qgw2wp8cyasycq5hmcr8frl09lr6gkw"; }; + patches = [ + # fix build with Unicode 12.1 + (fetchpatch { + url = "https://salsa.debian.org/gnome-team/gucharmap/raw/de079ad494a15f662416257fca2f2b8db757f4ea/debian/patches/update-to-unicode-12.1.patch"; + sha256 = "093gqsxfpp3s0b88p1dgkskr4ng3hv8irmxc60l3fdrkl8am00xh"; + }) + ]; + nativeBuildInputs = [ - pkgconfig wrapGAppsHook unzip intltool itstool - autoconf automake libtool gtk-doc docbook_xsl docbook_xml_dtd_412 - yelp-tools libxml2 desktop-file-utils gobject-introspection + pkgconfig + wrapGAppsHook + unzip + intltool + itstool + autoconf + automake + libtool + gtk-doc + docbook_xsl + docbook_xml_dtd_412 + yelp-tools + libxml2 + desktop-file-utils + gobject-introspection ]; - buildInputs = [ gtk3 glib gsettings-desktop-schemas adwaita-icon-theme ]; + buildInputs = [ + gtk3 + glib + gsettings-desktop-schemas + adwaita-icon-theme + ]; configureFlags = [ - "--with-unicode-data=${unicode-data}" + "--with-unicode-data=${ucd}/share/unicode" "--enable-gtk-doc" ]; @@ -51,7 +113,7 @@ in stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "GNOME Character Map, based on the Unicode Character Database"; - homepage = https://wiki.gnome.org/Apps/Gucharmap; + homepage = "https://wiki.gnome.org/Apps/Gucharmap"; license = licenses.gpl3; maintainers = gnome3.maintainers; platforms = platforms.linux; diff --git a/pkgs/desktops/gnome-3/core/gucharmap/unicode-data.nix b/pkgs/desktops/gnome-3/core/gucharmap/unicode-data.nix deleted file mode 100644 index 56104aff484..00000000000 --- a/pkgs/desktops/gnome-3/core/gucharmap/unicode-data.nix +++ /dev/null @@ -1,45 +0,0 @@ -{ fetchurl, stdenv, gnome3 }: -stdenv.mkDerivation rec { - pname = "unicode-data"; - version = "12.0.0"; - srcs = [ - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/Blocks.txt"; - sha256 = "041sk54v6rjzb23b9x7yjdwzdp2wc7gvfz7ybavgg4gbh51wm8x1"; - }) - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/DerivedAge.txt"; - sha256 = "04j92xp07v273z3pxkbfmi1svmw9kmnjl9nvz9fv0g5ybk9zk7r6"; - }) - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/NamesList.txt"; - sha256 = "0vsq8gx7hws8mvxy3nlglpwxw7ky57q0fs09d7w9xgb2ylk7fz61"; - }) - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/Scripts.txt"; - sha256 = "18c63hx4y5yg408a8d0wx72d2hfnlz4l560y1fsf9lpzifxpqcmx"; - }) - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/UnicodeData.txt"; - sha256 = "07d1kq190kgl92ispfx6zmdkvwvhjga0ishxsngzlw8j3kdkz4ap"; - }) - (fetchurl { - url = "http://www.unicode.org/Public/${version}/ucd/Unihan.zip"; - sha256 = "1kfdhgg2gm52x3s07bijb5cxjy0jxwhd097k5lqhvzpznprm6ibf"; - }) - ]; - phases = "installPhase"; - installPhase = with stdenv.lib; '' - mkdir $out - for f in $srcs;do - cp $f $out/$(stripHash $f) - done - ''; - meta = with stdenv.lib; { - homepage = http://www.unicode.org/ucd/; - description = "Unicode Character Database"; - maintainers = gnome3.maintainers; - license = licenses.mit; - platforms = platforms.all; - }; -} diff --git a/pkgs/desktops/gnome-3/core/mutter/default.nix b/pkgs/desktops/gnome-3/core/mutter/default.nix index 6d36b8710b6..61024788f15 100644 --- a/pkgs/desktops/gnome-3/core/mutter/default.nix +++ b/pkgs/desktops/gnome-3/core/mutter/default.nix @@ -1,8 +1,35 @@ -{ fetchurl, fetchpatch, substituteAll, stdenv, pkgconfig, gnome3, gettext, gobject-introspection, upower, cairo -, pango, cogl, json-glib, libstartup_notification, zenity, libcanberra-gtk3 -, ninja, xkeyboard_config, libxkbfile, libxkbcommon, libXtst, libinput -, gsettings-desktop-schemas, glib, gtk3, gnome-desktop -, geocode-glib, pipewire, libgudev, libwacom, xwayland, meson +{ fetchurl +, fetchpatch +, substituteAll +, stdenv +, pkgconfig +, gnome3 +, gettext +, gobject-introspection +, upower +, cairo +, pango +, cogl +, json-glib +, libstartup_notification +, zenity +, libcanberra-gtk3 +, ninja +, xkeyboard_config +, libxkbfile +, libxkbcommon +, libXtst +, libinput +, gsettings-desktop-schemas +, glib +, gtk3 +, gnome-desktop +, geocode-glib +, pipewire +, libgudev +, libwacom +, xwayland +, meson , gnome-settings-daemon , xorgserver , python3 @@ -15,65 +42,86 @@ stdenv.mkDerivation rec { pname = "mutter"; - version = "3.34.1"; + version = "3.34.2"; outputs = [ "out" "dev" "man" ]; src = fetchurl { url = "mirror://gnome/sources/mutter/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "13kmmgg2zizr0522clwc2zn3bkwbir503b1wjiiixf5xi37jc65s"; + sha256 = "0b8bz5kvs7rlwvqsg87cf6jhrrj95vgd1l235mjx8rip35ipfvrd"; }; mesonFlags = [ - "-Dxwayland-path=${xwayland}/bin/Xwayland" + "-Degl_device=true" "-Dinstalled_tests=false" # TODO: enable these "-Dwayland_eglstream=true" - "-Degl_device=true" + "-Dxwayland-path=${xwayland}/bin/Xwayland" ]; propagatedBuildInputs = [ # required for pkgconfig to detect mutter-clutter - libXtst json-glib + libXtst libcap_ng ]; nativeBuildInputs = [ - meson - pkgconfig + desktop-file-utils gettext + meson ninja + pkgconfig python3 - # for cvt command - xorgserver wrapGAppsHook - desktop-file-utils + xorgserver # for cvt command ]; buildInputs = [ - glib gobject-introspection gtk3 gsettings-desktop-schemas upower - gnome-desktop cairo pango cogl zenity libstartup_notification - geocode-glib libinput libgudev libwacom - libcanberra-gtk3 zenity xkeyboard_config libxkbfile - libxkbcommon pipewire xwayland egl-wayland - gnome-settings-daemon sysprof + cairo + cogl + egl-wayland + geocode-glib + glib + gnome-desktop + gnome-settings-daemon + gobject-introspection + gsettings-desktop-schemas + gtk3 + libcanberra-gtk3 + libgudev + libinput + libstartup_notification + libwacom + libxkbcommon + libxkbfile + pango + pipewire + sysprof + upower + xkeyboard_config + xwayland + zenity + zenity ]; patches = [ + # Fix build with libglvnd provided headers + (fetchpatch { + url = "https://gitlab.gnome.org/GNOME/mutter/commit/a444a4c5f58ea516ad3cd9d6ddc0056c3ca9bc90.patch"; + sha256 = "0imy2j8af9477jliwdq4jc40yw1cifsjjf196gnmwxr9rkj0hbrd"; + }) + # Drop inheritable cap_sys_nice, to prevent the ambient set from leaking # from mutter/gnome-shell, see https://github.com/NixOS/nixpkgs/issues/71381 ./drop-inheritable.patch - # TODO: submit upstream - ./0001-build-use-get_pkgconfig_variable-for-sysprof-dbusdir.patch + + # TODO: submit upstream + ./0001-build-use-get_pkgconfig_variable-for-sysprof-dbusdir.patch + (substituteAll { src = ./fix-paths.patch; inherit zenity; }) - # Fix build with libglvnd provided headers - (fetchpatch { - url = "https://gitlab.gnome.org/GNOME/mutter/commit/a444a4c5f58ea516ad3cd9d6ddc0056c3ca9bc90.patch"; - sha256 = "0imy2j8af9477jliwdq4jc40yw1cifsjjf196gnmwxr9rkj0hbrd"; - }) ]; postPatch = '' @@ -84,18 +132,18 @@ stdenv.mkDerivation rec { ${glib.dev}/bin/glib-compile-schemas "$out/share/glib-2.0/schemas" ''; - enableParallelBuilding = true; - passthru = { updateScript = gnome3.updateScript { - packageName = "mutter"; - attrPath = "gnome3.mutter"; + packageName = pname; + attrPath = "gnome3.${pname}"; }; }; meta = with stdenv.lib; { - platforms = platforms.linux; - maintainers = gnome3.maintainers; + description = "A window manager for GNOME"; + homepage = "https://gitlab.gnome.org/GNOME/mutter"; license = licenses.gpl2; + maintainers = gnome3.maintainers; + platforms = platforms.linux; }; } diff --git a/pkgs/desktops/gnome-3/extensions/workspace-grid.nix b/pkgs/desktops/gnome-3/extensions/workspace-grid.nix deleted file mode 100644 index 811e9911f62..00000000000 --- a/pkgs/desktops/gnome-3/extensions/workspace-grid.nix +++ /dev/null @@ -1,30 +0,0 @@ -{ stdenv, fetchFromGitHub, glib }: - -stdenv.mkDerivation rec { - pname = "gnome-shell-workspace-grid"; - version = "0f3a430e7d04bb5465a17c1225aab0f574426d6b"; - - src = fetchFromGitHub { - owner = "zakkak"; - repo = "workspace-grid-gnome-shell-extension"; - rev = version; - sha256 = "0503b7lmydrbblfvf9b56pv5hpmykzgyc6v8y99rckg58h2jhs69"; - }; - - buildInputs = [ - glib - ]; - - installPhase = '' - cp -r ${uuid} $out - ''; - - uuid = "workspace-grid@mathematical.coffee.gmail.com"; - - meta = with stdenv.lib; { - description = "Arranges workspaces in a configurable grid"; - license = licenses.gpl3Plus; - maintainers = with maintainers; [ aneeshusa ]; - homepage = https://github.com/zakkak/workspace-grid-gnome-shell-extension; - }; -} diff --git a/pkgs/desktops/gnome-3/extensions/workspace-matrix/default.nix b/pkgs/desktops/gnome-3/extensions/workspace-matrix/default.nix new file mode 100644 index 00000000000..ca4b72111c6 --- /dev/null +++ b/pkgs/desktops/gnome-3/extensions/workspace-matrix/default.nix @@ -0,0 +1,34 @@ +{ stdenv, fetchFromGitHub, findutils, glib }: + +stdenv.mkDerivation rec { + pname = "gnome-shell-extension-workspace-matrix"; + version = "3.0.0"; + + src = fetchFromGitHub { + owner = "mzur"; + repo = "gnome-shell-wsmatrix"; + rev = "v${version}"; + sha256 = "1fgyzmd16kklcca7600bwg8w8pbb4klmapqsvmahlwa99vmkhfkn"; + }; + + uuid = "wsmatrix@martin.zurowietz.de"; + + nativeBuildInputs = [ + findutils + glib + ]; + + buildFlags = "schemas"; + + installPhase = '' + mkdir -p $out/share/gnome-shell/extensions + cp -r ${uuid} $out/share/gnome-shell/extensions + ''; + + meta = with stdenv.lib; { + description = "Arrange workspaces in a two dimensional grid with workspace thumbnails"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ chkno ]; + homepage = https://github.com/mzur/gnome-shell-wsmatrix; + }; +} diff --git a/pkgs/desktops/gnome-3/misc/gnome-flashback/default.nix b/pkgs/desktops/gnome-3/misc/gnome-flashback/default.nix index 808d36dab95..c1791ee5bbd 100644 --- a/pkgs/desktops/gnome-3/misc/gnome-flashback/default.nix +++ b/pkgs/desktops/gnome-3/misc/gnome-flashback/default.nix @@ -141,6 +141,8 @@ let Type=Application DesktopNames=GNOME-Flashback;GNOME; ''; + } // { + providedSessions = [ "gnome-flashback-${wmName}" ]; }; mkSystemdTargetForWm = { wmName }: diff --git a/pkgs/desktops/mate/atril/default.nix b/pkgs/desktops/mate/atril/default.nix index f19114a5442..ecb9ea2e377 100644 --- a/pkgs/desktops/mate/atril/default.nix +++ b/pkgs/desktops/mate/atril/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "atril"; - version = "1.22.2"; + version = "1.22.3"; src = fetchurl { url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "11l78zkxszvsjr74cmk1wff5ycqrzd89y6k36rydv2rb5af2nsfw"; + sha256 = "06hmyw7fwdrdyl3n79b8qxlrwbzf240n82arzmlg62q9zxzdc0is"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/mate/caja-dropbox/default.nix b/pkgs/desktops/mate/caja-dropbox/default.nix index 597391eb135..820b1e905ec 100644 --- a/pkgs/desktops/mate/caja-dropbox/default.nix +++ b/pkgs/desktops/mate/caja-dropbox/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "18cnd3yw2ingvl38mhmfbl5k0kfg8pzcf2649j00i6v90cwiril5"; }; diff --git a/pkgs/desktops/mate/caja-extensions/default.nix b/pkgs/desktops/mate/caja-extensions/default.nix index 74b184d2cb0..10595bbbaec 100644 --- a/pkgs/desktops/mate/caja-extensions/default.nix +++ b/pkgs/desktops/mate/caja-extensions/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0xzhphzvaxbwyyp242pnhl5zjrkiznj90i0xjmy7pvi155pmp16h"; }; diff --git a/pkgs/desktops/mate/caja/default.nix b/pkgs/desktops/mate/caja/default.nix index 265b0b92222..2b3aa73708a 100644 --- a/pkgs/desktops/mate/caja/default.nix +++ b/pkgs/desktops/mate/caja/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1c5yr4b8pzd7nz7g7ln9jwp4fx6qgq8vgbv4spfryy53il3gv75h"; }; diff --git a/pkgs/desktops/mate/engrampa/default.nix b/pkgs/desktops/mate/engrampa/default.nix index 0278fd7fec8..4eefc7aa2e1 100644 --- a/pkgs/desktops/mate/engrampa/default.nix +++ b/pkgs/desktops/mate/engrampa/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0ph7ngk32nnzc3psqjs5zy52zbjilk30spr2r4sixqxvmz7d28gd"; }; diff --git a/pkgs/desktops/mate/eom/default.nix b/pkgs/desktops/mate/eom/default.nix index 2d32d8301c9..457a9e56c5d 100644 --- a/pkgs/desktops/mate/eom/default.nix +++ b/pkgs/desktops/mate/eom/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0za1lw4awg1i0ls0r9iw0ail2hqa34y1dx65b50bw9kx9kbfyl9l"; }; diff --git a/pkgs/desktops/mate/libmatekbd/default.nix b/pkgs/desktops/mate/libmatekbd/default.nix index d6709c375e6..6364b89204a 100644 --- a/pkgs/desktops/mate/libmatekbd/default.nix +++ b/pkgs/desktops/mate/libmatekbd/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.0"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1dsr7618c92mhwabwhgxqsfp7gnf9zrz2z790jc5g085dxhg13y8"; }; diff --git a/pkgs/desktops/mate/libmatemixer/default.nix b/pkgs/desktops/mate/libmatemixer/default.nix index 17fee5d61cb..9c2dc412d4d 100644 --- a/pkgs/desktops/mate/libmatemixer/default.nix +++ b/pkgs/desktops/mate/libmatemixer/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { version = "1.22.0"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1v0gpr55gj4mj8hzxbhgzrmhaxvs2inxhsmirvjw39sc7iplvrh9"; }; diff --git a/pkgs/desktops/mate/libmateweather/default.nix b/pkgs/desktops/mate/libmateweather/default.nix index c22c849a165..0c14cdb96b5 100644 --- a/pkgs/desktops/mate/libmateweather/default.nix +++ b/pkgs/desktops/mate/libmateweather/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1y3z82ymc7q6z8ly9f6nys0hbs373fjnvr6j7zwlgf6zc88f71h3"; }; diff --git a/pkgs/desktops/mate/marco/default.nix b/pkgs/desktops/mate/marco/default.nix index 88dd9e79bc8..fd551c0cc78 100644 --- a/pkgs/desktops/mate/marco/default.nix +++ b/pkgs/desktops/mate/marco/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "marco"; - version = "1.22.3"; + version = "1.22.4"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0faiqj9i1mqqy1v4jdcwy8nsbkkvs0cwd2dqypgscmcqpbq7jf8a"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "0z8q4nwm43imbnbxz348ylgzfl25sknb19kml57d6z6flxws19k3"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/mate/mate-applets/default.nix b/pkgs/desktops/mate/mate-applets/default.nix index a99405d517a..3b5a4ccf2a2 100644 --- a/pkgs/desktops/mate/mate-applets/default.nix +++ b/pkgs/desktops/mate/mate-applets/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1c32rkkry6kka2arrx5psjj037j79icp5jr1s0qh596dvsgxciqc"; }; diff --git a/pkgs/desktops/mate/mate-backgrounds/default.nix b/pkgs/desktops/mate/mate-backgrounds/default.nix index 2667c25959e..4b41caba710 100644 --- a/pkgs/desktops/mate/mate-backgrounds/default.nix +++ b/pkgs/desktops/mate/mate-backgrounds/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.0"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1j9ch04qi2q4mdcvb92w667ra9hpfdf2bfpi1dpw0nbph7r6qvj9"; }; diff --git a/pkgs/desktops/mate/mate-calc/default.nix b/pkgs/desktops/mate/mate-calc/default.nix index 81cfd3201a6..d89e1e35d92 100644 --- a/pkgs/desktops/mate/mate-calc/default.nix +++ b/pkgs/desktops/mate/mate-calc/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1as4gshydcf84vynq8ijd9n8pslz5jpw6aj18ri4bdc91a6q3rpg"; }; diff --git a/pkgs/desktops/mate/mate-common/default.nix b/pkgs/desktops/mate/mate-common/default.nix index 5eacbd08146..b0a7096c5e7 100644 --- a/pkgs/desktops/mate/mate-common/default.nix +++ b/pkgs/desktops/mate/mate-common/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1xx7qrw8kc6355r1a1nybncf8s2rxjb2nqzw0gv2r5j5sqx8fzgf"; }; diff --git a/pkgs/desktops/mate/mate-control-center/default.nix b/pkgs/desktops/mate/mate-control-center/default.nix index 836588e7e2b..d5c39a67d20 100644 --- a/pkgs/desktops/mate/mate-control-center/default.nix +++ b/pkgs/desktops/mate/mate-control-center/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1ybdjibi6wgqn3587a66ckxp2qkvl4mcvv2smhflyxksl5djrjgh"; }; diff --git a/pkgs/desktops/mate/mate-desktop/default.nix b/pkgs/desktops/mate/mate-desktop/default.nix index 35cacee5a4d..2dca83bcd46 100644 --- a/pkgs/desktops/mate/mate-desktop/default.nix +++ b/pkgs/desktops/mate/mate-desktop/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "18w5r9p3bqpvxqqy2am7z686xf65cz5vhj247kki8s2yvvap6rlh"; }; diff --git a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix index 1e1b2b837c3..a4fa6fedae3 100644 --- a/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix +++ b/pkgs/desktops/mate/mate-icon-theme-faenza/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.20.0"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "000vr9cnbl2qlysf2gyg1lsjirqdzmwrnh6d3hyrsfc0r2vh4wna"; }; diff --git a/pkgs/desktops/mate/mate-icon-theme/default.nix b/pkgs/desktops/mate/mate-icon-theme/default.nix index 74777a7ef5e..d374092c48a 100644 --- a/pkgs/desktops/mate/mate-icon-theme/default.nix +++ b/pkgs/desktops/mate/mate-icon-theme/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0r2bk4flb6kjj97badj2lnml4lfwpl2ym5hkf7r6f7cj8g6pzc4r"; }; diff --git a/pkgs/desktops/mate/mate-indicator-applet/default.nix b/pkgs/desktops/mate/mate-indicator-applet/default.nix index 9b471805ad3..b2e07d0a3e7 100644 --- a/pkgs/desktops/mate/mate-indicator-applet/default.nix +++ b/pkgs/desktops/mate/mate-indicator-applet/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "05j5s6r4kx1rbz0j7a7xv38d0kbdi1r8iv8b6nx3lkbkdzq1x0w2"; }; diff --git a/pkgs/desktops/mate/mate-media/default.nix b/pkgs/desktops/mate/mate-media/default.nix index ca1d7867807..156a305a63f 100644 --- a/pkgs/desktops/mate/mate-media/default.nix +++ b/pkgs/desktops/mate/mate-media/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0m8q2rqbxzvh82yj63syd8sbfjrc8y4a8caa42zs66j9x60d1agw"; }; diff --git a/pkgs/desktops/mate/mate-menus/default.nix b/pkgs/desktops/mate/mate-menus/default.nix index 3788c2d4894..299c9b0e60f 100644 --- a/pkgs/desktops/mate/mate-menus/default.nix +++ b/pkgs/desktops/mate/mate-menus/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0kh6y76f1rhp3nr22rp93bx77wcgqnygag2ir076cqkppayjc3c0"; }; diff --git a/pkgs/desktops/mate/mate-netbook/default.nix b/pkgs/desktops/mate/mate-netbook/default.nix index 077ba2268c9..337e2bfdb3b 100644 --- a/pkgs/desktops/mate/mate-netbook/default.nix +++ b/pkgs/desktops/mate/mate-netbook/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0m38v2276s2d3zs7smxyf70nyl7bcwp5665zgva28lvs8ip3gijx"; }; diff --git a/pkgs/desktops/mate/mate-notification-daemon/default.nix b/pkgs/desktops/mate/mate-notification-daemon/default.nix index a44b73c81a3..a83bbcb3ffb 100644 --- a/pkgs/desktops/mate/mate-notification-daemon/default.nix +++ b/pkgs/desktops/mate/mate-notification-daemon/default.nix @@ -6,7 +6,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0f8m3m94iqj2x61dzwwvwq2qlsl2ma8pqr6rfns5pzd0nj0waz0m"; }; diff --git a/pkgs/desktops/mate/mate-panel/default.nix b/pkgs/desktops/mate/mate-panel/default.nix index 09744ecfdaa..06e9b386adb 100644 --- a/pkgs/desktops/mate/mate-panel/default.nix +++ b/pkgs/desktops/mate/mate-panel/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1sm0fniywcxg8rbakhhc37bamwq1x3jqqyaqcvqwxvm6jg1hc97y"; }; diff --git a/pkgs/desktops/mate/mate-polkit/default.nix b/pkgs/desktops/mate/mate-polkit/default.nix index 253472e3987..e11bcb10257 100644 --- a/pkgs/desktops/mate/mate-polkit/default.nix +++ b/pkgs/desktops/mate/mate-polkit/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.0"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "02r8n71xflhvw2hsf6g4svdahzyg3r4n6xamasyzqfhyn0mqmjy0"; }; diff --git a/pkgs/desktops/mate/mate-power-manager/default.nix b/pkgs/desktops/mate/mate-power-manager/default.nix index df7223e2288..3f84e60f9b6 100644 --- a/pkgs/desktops/mate/mate-power-manager/default.nix +++ b/pkgs/desktops/mate/mate-power-manager/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "12pnj7y01k1fhfhswxmf6q9yyb0772am5anm338hzfhjp0lcxlbn"; }; diff --git a/pkgs/desktops/mate/mate-screensaver/default.nix b/pkgs/desktops/mate/mate-screensaver/default.nix index 4a2c0a5e2b8..0e99d03c081 100644 --- a/pkgs/desktops/mate/mate-screensaver/default.nix +++ b/pkgs/desktops/mate/mate-screensaver/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1y8828g4bys8y4r5y478z6i7dgdqm2wkymi5fq75vxx4lzq919cb"; }; diff --git a/pkgs/desktops/mate/mate-sensors-applet/default.nix b/pkgs/desktops/mate/mate-sensors-applet/default.nix index bd9ed9f6cbe..0c20880d7ec 100644 --- a/pkgs/desktops/mate/mate-sensors-applet/default.nix +++ b/pkgs/desktops/mate/mate-sensors-applet/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0rv19jxxviqqwk2wlhxlm98jsxa26scvs7ilp2i6plhn3ap2alq3"; }; diff --git a/pkgs/desktops/mate/mate-session-manager/default.nix b/pkgs/desktops/mate/mate-session-manager/default.nix index fb9ea7699ac..61dec6b3484 100644 --- a/pkgs/desktops/mate/mate-session-manager/default.nix +++ b/pkgs/desktops/mate/mate-session-manager/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "mate-session-manager"; - version = "1.22.2"; + version = "1.22.3"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "1v0a9jbsmf9axfqm2cnsqp5ihwffw7rl0z77dyw0m4j2pmyb0558"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "1ys26af75xl1psck8v32gygxipd8ms1xgpvdhwmnj7bqhabhh249"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/mate/mate-settings-daemon/default.nix b/pkgs/desktops/mate/mate-settings-daemon/default.nix index b7385839242..f126918afca 100644 --- a/pkgs/desktops/mate/mate-settings-daemon/default.nix +++ b/pkgs/desktops/mate/mate-settings-daemon/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0idw02z0iig0pfxvlhc4dq4sr7kl1w50xscvg0jzzswnxid2l4ip"; }; diff --git a/pkgs/desktops/mate/mate-system-monitor/default.nix b/pkgs/desktops/mate/mate-system-monitor/default.nix index 12818d206a8..982d2d77b3e 100644 --- a/pkgs/desktops/mate/mate-system-monitor/default.nix +++ b/pkgs/desktops/mate/mate-system-monitor/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1d4l5rv01343jf8bk2j5hxvrbp3d705nd4v2pdrjn4h5dw8nxsl1"; }; diff --git a/pkgs/desktops/mate/mate-terminal/default.nix b/pkgs/desktops/mate/mate-terminal/default.nix index 704db60ff15..905e5643898 100644 --- a/pkgs/desktops/mate/mate-terminal/default.nix +++ b/pkgs/desktops/mate/mate-terminal/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "08210ry5lrivsgzqpdaxrchhpj0n5s1q0x4pxmwdpnksjpcj11mn"; }; diff --git a/pkgs/desktops/mate/mate-themes/default.nix b/pkgs/desktops/mate/mate-themes/default.nix index 9ed5515ea3e..c994513273b 100644 --- a/pkgs/desktops/mate/mate-themes/default.nix +++ b/pkgs/desktops/mate/mate-themes/default.nix @@ -6,7 +6,7 @@ stdenv.mkDerivation rec { version = "3.22.20"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/themes/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/themes/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0c3dhf8p9nc2maky4g9xr04iil9wwbdkmhpzynlc6lfg4ksqq2bx"; }; diff --git a/pkgs/desktops/mate/mate-user-guide/default.nix b/pkgs/desktops/mate/mate-user-guide/default.nix index 72330317bc4..386b53837b1 100644 --- a/pkgs/desktops/mate/mate-user-guide/default.nix +++ b/pkgs/desktops/mate/mate-user-guide/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.3"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "0zv8arsxnbab0qk3ck9i1wp3d4gfclcv6vq6nh5i8zjz6rpp9cjs"; }; diff --git a/pkgs/desktops/mate/mate-user-share/default.nix b/pkgs/desktops/mate/mate-user-share/default.nix index 999bee2e5d1..7f5e4e10f14 100644 --- a/pkgs/desktops/mate/mate-user-share/default.nix +++ b/pkgs/desktops/mate/mate-user-share/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1krsar1pwa8720qz2dckcg0f6z9mvfk49djdxaz1afvi7blmqd6k"; }; diff --git a/pkgs/desktops/mate/mate-utils/default.nix b/pkgs/desktops/mate/mate-utils/default.nix index adb8fef27f5..0afeb00610b 100644 --- a/pkgs/desktops/mate/mate-utils/default.nix +++ b/pkgs/desktops/mate/mate-utils/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1i6fnm3y1hj8r57x4jpc4ixqs77zln8f7477d0haypflxm3s4kjr"; }; diff --git a/pkgs/desktops/mate/mozo/default.nix b/pkgs/desktops/mate/mozo/default.nix index 9d61f45e18e..365a471dd7a 100644 --- a/pkgs/desktops/mate/mozo/default.nix +++ b/pkgs/desktops/mate/mozo/default.nix @@ -8,7 +8,7 @@ python3.pkgs.buildPythonApplication rec { doCheck = false; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1lzcwsz940v218frwzhpywp1an9x3cgfvqr7r8dplpdapvd0khrs"; }; diff --git a/pkgs/desktops/mate/pluma/default.nix b/pkgs/desktops/mate/pluma/default.nix index e0b61fd35cb..cb1e3de376e 100644 --- a/pkgs/desktops/mate/pluma/default.nix +++ b/pkgs/desktops/mate/pluma/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.2"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "1gsj8grdhzb1jvl5zwd8zjc9cj9ys2ndny04gy4bbh80sjaj6xva"; }; diff --git a/pkgs/desktops/mate/python-caja/default.nix b/pkgs/desktops/mate/python-caja/default.nix index d861ddbf4d7..c566c8a6953 100644 --- a/pkgs/desktops/mate/python-caja/default.nix +++ b/pkgs/desktops/mate/python-caja/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { version = "1.22.1"; src = fetchurl { - url = "http://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + url = "https://pub.mate-desktop.org/releases/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; sha256 = "07hkvs4a6anrvh28zjsrj8anbcz32p19hslhq66yhcvh0hh4kvqk"; }; diff --git a/pkgs/desktops/pantheon/desktop/elementary-session-settings/default.nix b/pkgs/desktops/pantheon/desktop/elementary-session-settings/default.nix index ab7333212a0..07c9e724fc6 100644 --- a/pkgs/desktops/pantheon/desktop/elementary-session-settings/default.nix +++ b/pkgs/desktops/pantheon/desktop/elementary-session-settings/default.nix @@ -131,6 +131,7 @@ stdenv.mkDerivation rec { inherit repoName; attrPath = pname; }; + providedSessions = [ "pantheon" ]; }; meta = with stdenv.lib; { diff --git a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/datetime/default.nix b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/datetime/default.nix index a356b9c15d9..b4e9eeef0fd 100644 --- a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/datetime/default.nix +++ b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/datetime/default.nix @@ -16,23 +16,8 @@ , libxml2 , libsoup , elementary-calendar -, fetchurl }: -let - - # Terrible workaround https://github.com/elementary/wingpanel-indicator-datetime/issues/122 - # Evolution Data Server functionality will be broken (events from calendar in indicator) - # but at least we don't fail to build. - old-evolution-data-server = evolution-data-server.overrideAttrs(old: { - src = fetchurl { - url = "mirror://gnome/sources/evolution-data-server/${stdenv.lib.versions.majorMinor "3.32.4"}/${old.pname}-3.32.4.tar.xz"; - sha256 = "0zsc9xwy6ixk3x0dx69ax5isrdw8qxjdxg2i5fr95s40nss7rxl3"; - }; - }); - -in - stdenv.mkDerivation rec { pname = "wingpanel-indicator-datetime"; version = "2.2.1"; @@ -60,7 +45,7 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - old-evolution-data-server + evolution-data-server granite gtk3 libgee @@ -69,6 +54,14 @@ stdenv.mkDerivation rec { wingpanel ]; + patches = [ + # Add support for libecal-2.0 + (fetchpatch { + url = "https://github.com/elementary/wingpanel-indicator-datetime/commit/3ccd05d611e6dd5274a03f061ba1b5e13d6fe0cf.patch"; + sha256 = "011q9b4pjmk4fpq5zscl5r8m4n3jiyx464023h4j7zf8r1070jz6"; + }) + ]; + postPatch = '' chmod +x meson/post_install.py patchShebangs meson/post_install.py diff --git a/pkgs/desktops/pantheon/granite/default.nix b/pkgs/desktops/pantheon/granite/default.nix index ab673832857..1b73ac88df5 100644 --- a/pkgs/desktops/pantheon/granite/default.nix +++ b/pkgs/desktops/pantheon/granite/default.nix @@ -16,13 +16,13 @@ stdenv.mkDerivation rec { pname = "granite"; - version = "5.2.5"; + version = "5.3.0"; src = fetchFromGitHub { owner = "elementary"; repo = pname; rev = version; - sha256 = "0z40vhcp2w8s8rnc56pzvjc4s77bln8k84rwwypivjmk3lhpw1vi"; + sha256 = "1gvrk8gh959bmq8w0kaym7sx13v763lk8x5hck00msgmyrsarfwa"; }; passthru = { diff --git a/pkgs/desktops/pantheon/services/contractor/default.nix b/pkgs/desktops/pantheon/services/contractor/default.nix index b10e97f77d7..5061793fa10 100644 --- a/pkgs/desktops/pantheon/services/contractor/default.nix +++ b/pkgs/desktops/pantheon/services/contractor/default.nix @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A desktop-wide extension service used by elementary OS"; - homepage = https://github.com/elementarycontractor; + homepage = "https://github.com/elementary/contractor"; license = licenses.gpl3Plus; platforms = platforms.linux; maintainers = pantheon.maintainers; diff --git a/pkgs/desktops/plasma-5/kwin/scripts/krohnkite.nix b/pkgs/desktops/plasma-5/kwin/scripts/krohnkite.nix new file mode 100644 index 00000000000..7a7c88b6bcf --- /dev/null +++ b/pkgs/desktops/plasma-5/kwin/scripts/krohnkite.nix @@ -0,0 +1,39 @@ +{ lib, mkDerivation, fetchFromGitHub +, kcoreaddons, kwindowsystem, plasma-framework, systemsettings }: + +mkDerivation rec { + pname = "krohnkite"; + version = "0.5"; + + src = fetchFromGitHub { + owner = "esjeon"; + repo = "krohnkite"; + rev = "v${version}"; + sha256 = "0i0xr5aj565dzr72zjg7wmyca2gwg9izhnri63pab5y5gp5zjqn2"; + }; + + buildInputs = [ + kcoreaddons kwindowsystem plasma-framework systemsettings + ]; + + dontBuild = true; + + # 1. --global still installs to $HOME/.local/share so we use --packageroot + # 2. plasmapkg2 doesn't copy metadata.desktop into place, so we do that manually + installPhase = '' + runHook preInstall + + plasmapkg2 --type kwinscript --install ${src}/res/ --packageroot $out/share/kwin/scripts + install -Dm644 ${src}/res/metadata.desktop $out/share/kservices5/krohnkite.desktop + + runHook postInstalll + ''; + + meta = with lib; { + description = "A dynamic tiling extension for KWin"; + license = licenses.mit; + maintainers = with maintainers; [ seqizz ]; + inherit (src.meta) homepage; + inherit (kwindowsystem.meta) platforms; + }; +} diff --git a/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch b/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch index 5c27eee5010..5159328ed3f 100644 --- a/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch +++ b/pkgs/desktops/plasma-5/plasma-workspace/plasma-workspace.patch @@ -1,9 +1,8 @@ diff --git a/sddm-theme/theme.conf.cmake b/sddm-theme/theme.conf.cmake -index 69d3070..52e9102 100644 +index ea9a943..f98ddd2 100644 --- a/sddm-theme/theme.conf.cmake +++ b/sddm-theme/theme.conf.cmake -@@ -1,5 +1,5 @@ - [General] +@@ -2,4 +2,4 @@ type=image color=#1d99f3 fontSize=10 @@ -37,7 +36,7 @@ index 493218e..d507aa5 100644 + return system( NIXPKGS_KDOSTARTUPCONFIG5 ); } diff --git a/startkde/startkde.cmake b/startkde/startkde.cmake -index b68f0c6..a0ec214 100644 +index b68f0c6..97a13a1 100644 --- a/startkde/startkde.cmake +++ b/startkde/startkde.cmake @@ -1,22 +1,31 @@ @@ -443,7 +442,7 @@ index b68f0c6..a0ec214 100644 if test $? -eq 255; then # Startup error echo 'startkde: Could not start ksmserver. Check your installation.' 1>&2 -@@ -286,36 +387,36 @@ fi +@@ -286,19 +387,19 @@ fi #Anything after here is logout #It is not called after shutdown/restart @@ -465,13 +464,12 @@ index b68f0c6..a0ec214 100644 # ask remaining drkonqis to die in a graceful way - qdbus | grep 'org.kde.drkonqi-' | while read address ; do - qdbus "$address" "/MainApplication" "quit" -- done -- break + @NIXPKGS_QDBUS@ | @NIXPKGS_GREP@ 'org.kde.drkonqi-' | while read address ; do + @NIXPKGS_QDBUS@ "$address" "/MainApplication" "quit" + done + break fi - done - fi +@@ -307,15 +408,17 @@ fi echo 'startkde: Shutting down...' 1>&2 # just in case @@ -1008,5 +1006,3 @@ index dcb473a..0988740 100644 echo 'startplasmacompositor: Shutting down...' 1>&2 --- -2.19.2 diff --git a/pkgs/desktops/surf-display/default.nix b/pkgs/desktops/surf-display/default.nix index 47b7e117206..dd064486647 100644 --- a/pkgs/desktops/surf-display/default.nix +++ b/pkgs/desktops/surf-display/default.nix @@ -43,6 +43,10 @@ stdenv.mkDerivation rec { makeFlags = [ "PREFIX=${placeholder "out"}" ]; + passthru = { + providedSessions = [ "surf-display" ]; + }; + meta = with stdenv.lib; { description = "Kiosk browser session manager based on the surf browser"; homepage = "https://code.it-zukunft-schule.de/cgit/surf-display/"; diff --git a/pkgs/development/androidndk-pkgs/androidndk-pkgs.nix b/pkgs/development/androidndk-pkgs/androidndk-pkgs.nix index 6bcfcfc3023..f8be40eecab 100644 --- a/pkgs/development/androidndk-pkgs/androidndk-pkgs.nix +++ b/pkgs/development/androidndk-pkgs/androidndk-pkgs.nix @@ -56,7 +56,7 @@ rec { binaries = runCommand "ndk-gcc-binutils" { isClang = true; # clang based cc, but bintools ld nativeBuildInputs = [ makeWrapper ]; - propgatedBuildInputs = [ androidndk ]; + propagatedBuildInputs = [ androidndk ]; } '' mkdir -p $out/bin diff --git a/pkgs/development/chez-modules/chez-matchable/default.nix b/pkgs/development/chez-modules/chez-matchable/default.nix new file mode 100644 index 00000000000..2b3de233f9b --- /dev/null +++ b/pkgs/development/chez-modules/chez-matchable/default.nix @@ -0,0 +1,33 @@ +{ stdenv, fetchFromGitHub, chez }: + +stdenv.mkDerivation rec { + pname = "chez-matchable"; + version = "20160306"; + + src = fetchFromGitHub { + owner = "fedeinthemix"; + repo = "chez-matchable"; + rev = "v${version}"; + sha256 = "02qn7x348p23z1x5lwhkyj7i8z6mgwpzpnwr8dyina0yzsdkr71s"; + }; + + buildInputs = [ chez ]; + + buildPhase = '' + make PREFIX=$out CHEZ=${chez}/bin/scheme + ''; + + installPhase = '' + make install PREFIX=$out CHEZ=${chez}/bin/scheme + ''; + + doCheck = false; + + meta = { + description = "This is a Library for ChezScheme providing the protable hygenic pattern matcher by Alex Shinn"; + homepage = https://github.com/fedeinthemix/chez-matchable/; + maintainers = [ stdenv.lib.maintainers.jitwit ]; + license = stdenv.lib.licenses.publicDomain; + }; + +} diff --git a/pkgs/development/compilers/bs-platform/bs-platform-62.nix b/pkgs/development/compilers/bs-platform/bs-platform-62.nix new file mode 100644 index 00000000000..d2913caaee6 --- /dev/null +++ b/pkgs/development/compilers/bs-platform/bs-platform-62.nix @@ -0,0 +1,55 @@ +{ stdenv, fetchFromGitHub, ninja, nodejs, python3 }: +let + version = "6.2.1"; + ocaml-version = "4.06.1"; + src = fetchFromGitHub { + owner = "BuckleScript"; + repo = "bucklescript"; + rev = "${version}"; + sha256 = "0zx9nq7cik0c60n3rndqfqy3vdbj5lcrx6zcqcz2d60jjxi1z32y"; + fetchSubmodules = true; + }; + ocaml = import ./ocaml.nix { + bs-version = version; + version = ocaml-version; + inherit stdenv; + src = "${src}/ocaml"; + }; +in +stdenv.mkDerivation { + inherit src version; + pname = "bs-platform"; + BS_RELEASE_BUILD = "true"; + buildInputs = [ nodejs python3 ]; + + patchPhase = '' + sed -i 's:./configure.py --bootstrap:python3 ./configure.py --bootstrap:' ./scripts/install.js + + mkdir -p ./native/${ocaml-version}/bin + ln -sf ${ocaml}/bin/* ./native/${ocaml-version}/bin + + rm -f vendor/ninja/snapshot/ninja.linux + cp ${ninja}/bin/ninja vendor/ninja/snapshot/ninja.linux + ''; + + configurePhase = '' + node scripts/ninja.js config + ''; + + buildPhase = '' + node scripts/ninja.js build + ''; + + installPhase = '' + node scripts/install.js + + mkdir -p $out/bin + + cp -rf jscomp lib vendor odoc_gen native $out + cp bsconfig.json package.json $out + + ln -s $out/lib/bsb $out/bin/bsb + ln -s $out/lib/bsc $out/bin/bsc + ln -s $out/lib/bsrefmt $out/bin/bsrefmt + ''; +} diff --git a/pkgs/development/compilers/bs-platform/default.nix b/pkgs/development/compilers/bs-platform/default.nix new file mode 100644 index 00000000000..5eb11671ca9 --- /dev/null +++ b/pkgs/development/compilers/bs-platform/default.nix @@ -0,0 +1,15 @@ +{ stdenv, fetchFromGitHub, ninja, nodejs, python3, ... }: +let + meta = with stdenv.lib; { + description = "A JavaScript backend for OCaml focused on smooth integration and clean generated code."; + homepage = https://bucklescript.github.io; + license = licenses.lgpl3; + maintainers = with maintainers; [ turbomack gamb ]; + platforms = platforms.all; + }; +in +{ + bs-platform-621 = import ./bs-platform-62.nix { + inherit stdenv fetchFromGitHub ninja nodejs python3; + } // { inherit meta; }; +} diff --git a/pkgs/development/compilers/bs-platform/ocaml.nix b/pkgs/development/compilers/bs-platform/ocaml.nix new file mode 100644 index 00000000000..1f2fdd571f3 --- /dev/null +++ b/pkgs/development/compilers/bs-platform/ocaml.nix @@ -0,0 +1,16 @@ +{ stdenv, src, version, bs-version }: +stdenv.mkDerivation rec { + inherit src version; + name = "ocaml-${version}+bs-${bs-version}"; + configurePhase = '' + ./configure -prefix $out + ''; + buildPhase = '' + make -j9 world.opt + ''; + + meta = with stdenv.lib; { + branch = "4.06"; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/compilers/chicken/4/eggDerivation.nix b/pkgs/development/compilers/chicken/4/eggDerivation.nix index 16f9c413d4c..cd340c22174 100644 --- a/pkgs/development/compilers/chicken/4/eggDerivation.nix +++ b/pkgs/development/compilers/chicken/4/eggDerivation.nix @@ -8,7 +8,7 @@ let libPath = "${chicken}/var/lib/chicken/${toString chicken.binaryVersion}/"; overrides = import ./overrides.nix; - baseName = lib.getName name; + baseName = stdenv.lib.getName name; override = if builtins.hasAttr baseName overrides then builtins.getAttr baseName overrides diff --git a/pkgs/development/compilers/chicken/4/eggs.nix b/pkgs/development/compilers/chicken/4/eggs.nix index 1f786f127c9..6e6f104f8a0 100644 --- a/pkgs/development/compilers/chicken/4/eggs.nix +++ b/pkgs/development/compilers/chicken/4/eggs.nix @@ -1,4 +1,4 @@ -{ pkgs }: +{ pkgs, stdenv }: rec { inherit (pkgs) eggDerivation fetchegg; @@ -16,35 +16,6 @@ rec { ]; }; - blob-utils = eggDerivation { - name = "blob-utils-1.0.3"; - - src = fetchegg { - name = "blob-utils"; - version = "1.0.3"; - sha256 = "17vdn02fnxnjx5ixgqimln93lqvzyq4y9w02fw7xnbdcjzqm0xml"; - }; - - buildInputs = [ - setup-helper - string-utils - ]; - }; - - check-errors = eggDerivation { - name = "check-errors-1.13.0"; - - src = fetchegg { - name = "check-errors"; - version = "1.13.0"; - sha256 = "12a0sn82n98jybh72zb39fdddmr5k4785xglxb16750fhy8rmjwi"; - }; - - buildInputs = [ - setup-helper - ]; - }; - defstruct = eggDerivation { name = "defstruct-1.6"; @@ -60,31 +31,29 @@ rec { }; http-client = eggDerivation { - name = "http-client-0.7.1"; + name = "http-client-0.18"; src = fetchegg { name = "http-client"; - version = "0.7.1"; - sha256 = "1s03zgmb7kb99ld0f2ylqgicrab9qgza53fkgsqvg7bh5njmzhxr"; + version = "0.18"; + sha256 = "1b9x66kfcglld4xhm06vba00gw37vr07c859kj7lmwnk9nwhcplg"; }; buildInputs = [ intarweb uri-common - message-digest - md5 - string-utils + simple-md5 sendfile ]; }; intarweb = eggDerivation { - name = "intarweb-1.3"; + name = "intarweb-1.7"; src = fetchegg { name = "intarweb"; - version = "1.3"; - sha256 = "0izlby78c25py29bdcbc0vapb6h7xgchqrzi6i51d0rb3mnwy88h"; + version = "1.7"; + sha256 = "1arjgn5g4jfdzj3nlrhxk235qwf6k6jxr14yhnncnfbgdb820xp8"; }; buildInputs = [ @@ -94,92 +63,13 @@ rec { ]; }; - lookup-table = eggDerivation { - name = "lookup-table-1.13.5"; - - src = fetchegg { - name = "lookup-table"; - version = "1.13.5"; - sha256 = "1nzly6rhynawlvzlyilk8z8cxz57cf9n5iv20glkhh28pz2izmrb"; - }; - - buildInputs = [ - setup-helper - check-errors - miscmacros - record-variants - synch - ]; - }; - matchable = eggDerivation { - name = "matchable-3.3"; + name = "matchable-3.7"; src = fetchegg { name = "matchable"; - version = "3.3"; - sha256 = "07y3lpzgm4djiwi9y2adc796f9kwkmdr28fkfkw65syahdax8990"; - }; - - buildInputs = [ - - ]; - }; - - md5 = eggDerivation { - name = "md5-3.1.0"; - - src = fetchegg { - name = "md5"; - version = "3.1.0"; - sha256 = "0bka43nx8x9b0b079qpvml2fl20km19ny0qjmhwzlh6rwmzazj2a"; - }; - - buildInputs = [ - message-digest - ]; - }; - - message-digest = eggDerivation { - name = "message-digest-3.1.0"; - - src = fetchegg { - name = "message-digest"; - version = "3.1.0"; - sha256 = "1w6bax19dwgih78vcimiws0rja7qsd8hmbm6qqg2hf9cw3vab21s"; - }; - - buildInputs = [ - setup-helper - miscmacros - check-errors - variable-item - blob-utils - string-utils - ]; - }; - - miscmacros = eggDerivation { - name = "miscmacros-2.96"; - - src = fetchegg { - name = "miscmacros"; - version = "2.96"; - sha256 = "1ajdgjrni10i2hmhcp4rawnxajjxry3kmq1krdmah4sf0kjrgajc"; - }; - - buildInputs = [ - - ]; - }; - - record-variants = eggDerivation { - name = "record-variants-0.5.1"; - - src = fetchegg { - name = "record-variants"; - version = "0.5.1"; - sha256 = "15wgysxkm8m4hx9nhhw9akchzipdnqc7yj3qd3zn0z7sxg4sld1h"; + version = "3.7"; + sha256 = "1vc9rpb44fhn0n91hzglin986dw9zj87fikvfrd7j308z22a41yh"; }; buildInputs = [ @@ -188,12 +78,12 @@ rec { }; sendfile = eggDerivation { - name = "sendfile-1.7.29"; + name = "sendfile-1.8.3"; src = fetchegg { name = "sendfile"; - version = "1.7.29"; - sha256 = "1dc02cbkx5kixhbqjy26g6gs680vy7krc9qis1p1v4aa0b2lgj7k"; + version = "1.8.3"; + sha256 = "036x4xdndx7qly94afnag5b9idd1yymdm8d832w2cy054y7lxqsi"; }; buildInputs = [ @@ -201,13 +91,13 @@ rec { ]; }; - setup-helper = eggDerivation { - name = "setup-helper-1.5.4"; + simple-md5 = eggDerivation { + name = "simple-md5-0.0.1"; src = fetchegg { - name = "setup-helper"; - version = "1.5.4"; - sha256 = "1k644y0md2isdcvazqfm4nyc8rh3dby6b0j3r4na4w8ryspqp6gj"; + name = "simple-md5"; + version = "0.0.1"; + sha256 = "1h0b51p9wl1dl3pzs39hdq3hk2qnjgn8n750bgmh0651g4lzmq3i"; }; buildInputs = [ @@ -215,38 +105,6 @@ rec { ]; }; - string-utils = eggDerivation { - name = "string-utils-1.2.4"; - - src = fetchegg { - name = "string-utils"; - version = "1.2.4"; - sha256 = "07alvghg0dahilrm4jg44bndl0x69sv1zbna9l20cbdvi35i0jp1"; - }; - - buildInputs = [ - setup-helper - miscmacros - lookup-table - check-errors - ]; - }; - - synch = eggDerivation { - name = "synch-2.1.2"; - - src = fetchegg { - name = "synch"; - version = "2.1.2"; - sha256 = "1m9mnbq0m5jsxmd1a3rqpwpxj0l1b7vn1fknvxycc047pmlcyl00"; - }; - - buildInputs = [ - setup-helper - check-errors - ]; - }; - uri-common = eggDerivation { name = "uri-common-1.4"; @@ -264,32 +122,16 @@ rec { }; uri-generic = eggDerivation { - name = "uri-generic-2.41"; + name = "uri-generic-2.46"; src = fetchegg { name = "uri-generic"; - version = "2.41"; - sha256 = "1r5jbzjllbnmhm5n0m3fcx0g6dc2c2jzp1dcndkfmxz0cl99zxac"; + version = "2.46"; + sha256 = "10ivf4xlmr6jcm00l2phq1y73hjv6g3qgr38ycc8rw56wv6sbm4g"; }; buildInputs = [ matchable - defstruct - ]; - }; - - variable-item = eggDerivation { - name = "variable-item-1.3.1"; - - src = fetchegg { - name = "variable-item"; - version = "1.3.1"; - sha256 = "19b3mhb8kr892sz9yyzq79l0vv28dgilw9cf415kj6aq16yp4d5n"; - }; - - buildInputs = [ - setup-helper - check-errors ]; }; } diff --git a/pkgs/development/compilers/chicken/4/setup-hook.sh b/pkgs/development/compilers/chicken/4/setup-hook.sh index b0d9b53b537..661dc08c090 100644 --- a/pkgs/development/compilers/chicken/4/setup-hook.sh +++ b/pkgs/development/compilers/chicken/4/setup-hook.sh @@ -1,7 +1,6 @@ addChickenRepositoryPath() { addToSearchPathWithCustomDelimiter : CHICKEN_REPOSITORY_EXTRA "$1/lib/chicken/8/" - # addToSearchPathWithCustomDelimiter \; CHICKEN_INCLUDE_PATH "$1/share/" - export CHICKEN_INCLUDE_PATH="$1/share;$CHICKEN_INCLUDE_PATH" + export CHICKEN_INCLUDE_PATH="$1/share${CHICKEN_INCLUDE_PATH:+;$CHICKEN_INCLUDE_PATH}" } addEnvHooks "$targetOffset" addChickenRepositoryPath diff --git a/pkgs/development/compilers/chicken/5/eggDerivation.nix b/pkgs/development/compilers/chicken/5/eggDerivation.nix index 3dc1c4afce9..8d4a62776d0 100644 --- a/pkgs/development/compilers/chicken/5/eggDerivation.nix +++ b/pkgs/development/compilers/chicken/5/eggDerivation.nix @@ -7,7 +7,7 @@ let overrides = import ./overrides.nix; - baseName = (builtins.parseDrvName name).name; + baseName = stdenv.lib.getName name; override = if builtins.hasAttr baseName overrides then builtins.getAttr baseName overrides diff --git a/pkgs/development/compilers/chicken/5/eggs.nix b/pkgs/development/compilers/chicken/5/eggs.nix index a8e3ee5976e..a35b1f05891 100644 --- a/pkgs/development/compilers/chicken/5/eggs.nix +++ b/pkgs/development/compilers/chicken/5/eggs.nix @@ -47,12 +47,12 @@ rec { }; srfi-13 = eggDerivation { - name = "srfi-13-0.2.1"; + name = "srfi-13-0.3"; src = fetchegg { name = "srfi-13"; - version = "0.2.1"; - sha256 = "0204i7fhc4dy0l89lbi2lv9cjndrvwyrk68z3wy7x445jb4ky1gq"; + version = "0.3"; + sha256 = "0yaw9i6zhpxl1794pirh168clprjgmsb0xlr96drirjzsslgm3zp"; }; buildInputs = [ diff --git a/pkgs/development/compilers/ecl/16.1.2.nix b/pkgs/development/compilers/ecl/16.1.2.nix index bede9fa4aa6..a7b2aa6be74 100644 --- a/pkgs/development/compilers/ecl/16.1.2.nix +++ b/pkgs/development/compilers/ecl/16.1.2.nix @@ -61,6 +61,7 @@ stdenv.mkDerivation { url = "https://git.sagemath.org/sage.git/plain/build/pkgs/ecl/patches/16.1.2-getcwd.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; sha256 = "1fbi8gn7rv8nqff5mpaijsrch3k3z7qc5cn4h1vl8qrr8xwqlqhb"; }) + ./ecl-1.16.2-libffi-3.3-abi.patch ]; hardeningDisable = [ "format" ]; diff --git a/pkgs/development/compilers/ecl/default.nix b/pkgs/development/compilers/ecl/default.nix index 33ed690772e..375b38f1dc6 100644 --- a/pkgs/development/compilers/ecl/default.nix +++ b/pkgs/development/compilers/ecl/default.nix @@ -35,6 +35,10 @@ stdenv.mkDerivation { inherit (s) url sha256; }; + patches = [ + ./libffi-3.3-abi.patch + ]; + configureFlags = [ (if threadSupport then "--enable-threads" else "--disable-threads") "--with-gmp-prefix=${gmp.dev}" diff --git a/pkgs/development/compilers/ecl/ecl-1.16.2-libffi-3.3-abi.patch b/pkgs/development/compilers/ecl/ecl-1.16.2-libffi-3.3-abi.patch new file mode 100644 index 00000000000..28dd7d0805b --- /dev/null +++ b/pkgs/development/compilers/ecl/ecl-1.16.2-libffi-3.3-abi.patch @@ -0,0 +1,15 @@ +diff --git a/src/c/ffi.d b/src/c/ffi.d +index 8861303e..8a959c23 100644 +--- a/src/c/ffi.d ++++ b/src/c/ffi.d +@@ -145,8 +145,8 @@ static struct { + #elif defined(X86_WIN64) + {@':win64', FFI_WIN64}, + #elif defined(X86_ANY) || defined(X86) || defined(X86_64) +- {@':cdecl', FFI_SYSV}, +- {@':sysv', FFI_SYSV}, ++ {@':cdecl', FFI_UNIX64}, ++ {@':sysv', FFI_UNIX64}, + {@':unix64', FFI_UNIX64}, + #endif + }; diff --git a/pkgs/development/compilers/ecl/libffi-3.3-abi.patch b/pkgs/development/compilers/ecl/libffi-3.3-abi.patch new file mode 100644 index 00000000000..0a2b5f4dd56 --- /dev/null +++ b/pkgs/development/compilers/ecl/libffi-3.3-abi.patch @@ -0,0 +1,15 @@ +diff --git a/src/c/ffi.d b/src/c/ffi.d +index 8174977a..caa69f39 100644 +--- a/src/c/ffi.d ++++ b/src/c/ffi.d +@@ -133,8 +133,8 @@ static struct { + #elif defined(X86_WIN64) + {@':win64', FFI_WIN64}, + #elif defined(X86_ANY) || defined(X86) || defined(X86_64) +- {@':cdecl', FFI_SYSV}, +- {@':sysv', FFI_SYSV}, ++ {@':cdecl', FFI_UNIX64}, ++ {@':sysv', FFI_UNIX64}, + {@':unix64', FFI_UNIX64}, + #endif + }; diff --git a/pkgs/development/compilers/gcc/7/default.nix b/pkgs/development/compilers/gcc/7/default.nix index 3362cfe7a08..237cb455f9f 100644 --- a/pkgs/development/compilers/gcc/7/default.nix +++ b/pkgs/development/compilers/gcc/7/default.nix @@ -43,7 +43,7 @@ with stdenv.lib; with builtins; let majorVersion = "7"; - version = "${majorVersion}.4.0"; + version = "${majorVersion}.5.0"; inherit (stdenv) buildPlatform hostPlatform targetPlatform; @@ -85,7 +85,7 @@ stdenv.mkDerivation ({ src = fetchurl { url = "mirror://gcc/releases/gcc-${version}/gcc-${version}.tar.xz"; - sha256 = "0lgy170b0pp60j9cczqkmaqyjjb584vfamj4c30swd7k0j6y5pgd"; + sha256 = "0qg6kqc5l72hpnj4vr6l0p69qav0rh4anlkk3y55540zy3klc6dq"; }; inherit patches; diff --git a/pkgs/development/compilers/gleam/default.nix b/pkgs/development/compilers/gleam/default.nix new file mode 100644 index 00000000000..2080a643959 --- /dev/null +++ b/pkgs/development/compilers/gleam/default.nix @@ -0,0 +1,24 @@ +{ stdenv, rustPlatform, fetchFromGitHub, Security }: + +rustPlatform.buildRustPackage rec { + pname = "gleam"; + version = "0.5.0"; + + src = fetchFromGitHub { + owner = "lpil"; + repo = pname; + rev = "v${version}"; + sha256 = "17h573fm5b1f71ivyipl76p0vw7injm7j3cbg6plkfizcb1j5m7f"; + }; + + buildInputs = stdenv.lib.optionals stdenv.isDarwin [ Security ]; + + cargoSha256 = "04v1gj5nmmcizyrsg6b87qsfzw2zqi57vf1zlnq8680yc54qdah9"; + + meta = with stdenv.lib; { + description = "A statically typed language for the Erlang VM"; + homepage = "https://gleam.run/"; + license = licenses.asl20; + maintainers = with maintainers; [ filalex77 ]; + }; +} diff --git a/pkgs/development/compilers/go/1.13.nix b/pkgs/development/compilers/go/1.13.nix index 9e8a6601724..6b7c99c0743 100644 --- a/pkgs/development/compilers/go/1.13.nix +++ b/pkgs/development/compilers/go/1.13.nix @@ -30,11 +30,11 @@ in stdenv.mkDerivation rec { pname = "go"; - version = "1.13.4"; + version = "1.13.5"; src = fetchurl { url = "https://dl.google.com/go/go${version}.src.tar.gz"; - sha256 = "093n5v0bipaan0qqc02wash18r625y74r4zhmjwlc9zf8asfmnwm"; + sha256 = "1zr6lravlmyld57nnymkcr092pys4pr8qy0ans1rj3dkl3i5dlr7"; }; # perl is used for testing go vet @@ -57,8 +57,8 @@ stdenv.mkDerivation rec { --replace '#!/usr/bin/env bash' '#!${runtimeShell}' # Patch the mimetype database location which is missing on NixOS. - substituteInPlace src/mime/type_unix.go \ - --replace '/etc/mime.types' '${mailcap}/etc/mime.types' + # but also allow static binaries built with NixOS to run outside nix + sed -i 's,\"/etc/mime.types,"${mailcap}/etc/mime.types\"\,\n\t&,' src/mime/type_unix.go # Disabling the 'os/http/net' tests (they want files not available in # chroot builds) @@ -97,7 +97,10 @@ stdenv.mkDerivation rec { rm src/net/cgo_unix_test.go '' + optionalString stdenv.isLinux '' - sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go + # prepend the nix path to the zoneinfo files but also leave the original value for static binaries + # that run outside a nix server + sed -i 's,\"/usr/share/zoneinfo/,"${tzdata}/share/zoneinfo/\"\,\n\t&,' src/time/zoneinfo_unix.go + '' + optionalString stdenv.isAarch32 '' echo '#!${runtimeShell}' > misc/cgo/testplugin/test.bash '' + optionalString stdenv.isDarwin '' diff --git a/pkgs/development/compilers/go/1.4.nix b/pkgs/development/compilers/go/1.4.nix index 1052f1f1ae1..0dd852a1ef1 100644 --- a/pkgs/development/compilers/go/1.4.nix +++ b/pkgs/development/compilers/go/1.4.nix @@ -61,7 +61,9 @@ stdenv.mkDerivation rec { sed -i 's,/etc/protocols,${iana-etc}/etc/protocols,' src/net/lookup_unix.go '' + lib.optionalString stdenv.isLinux '' - sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go + # prepend the nix path to the zoneinfo files but also leave the original value for static binaries + # that run outside a nix server + sed -i 's,\"/usr/share/zoneinfo/,"${tzdata}/share/zoneinfo/\"\,\n\t&,' src/time/zoneinfo_unix.go # Find the loader dynamically LOADER="$(find ${lib.getLib libc}/lib -name ld-linux\* | head -n 1)" diff --git a/pkgs/development/compilers/osl/default.nix b/pkgs/development/compilers/osl/default.nix index 26ef76382a3..86a13a776ce 100644 --- a/pkgs/development/compilers/osl/default.nix +++ b/pkgs/development/compilers/osl/default.nix @@ -8,13 +8,13 @@ in clangStdenv.mkDerivation rec { # In theory this could use GCC + Clang rather than just Clang, # but https://github.com/NixOS/nixpkgs/issues/29877 stops this name = "openshadinglanguage-${version}"; - version = "1.10.7"; + version = "1.10.8"; src = fetchFromGitHub { owner = "imageworks"; repo = "OpenShadingLanguage"; - rev = "Release-1.10.7"; - sha256 = "15grach34grp8x65sq8xzs2s6nfzjhn4blpfnaicw46jdi4c2w59"; + rev = "Release-1.10.8"; + sha256 = "1vfdbs1yprr22nx64ff89jcqabfw0md8drifpbzqn2v6ipc8gz6a"; }; cmakeFlags = [ "-DUSE_BOOST_WAVE=ON" "-DENABLERTTI=ON" ]; diff --git a/pkgs/development/compilers/rasm/default.nix b/pkgs/development/compilers/rasm/default.nix new file mode 100644 index 00000000000..ced0855597c --- /dev/null +++ b/pkgs/development/compilers/rasm/default.nix @@ -0,0 +1,33 @@ +{ stdenv, fetchurl, unzip }: + +stdenv.mkDerivation rec { + pname = "rasm"; + version = "0.117"; + + src = fetchurl { + url = "www.roudoudou.com/export/cpc/rasm/${pname}_v0117_src.zip"; + sha256 = "1hwily4cfays59qm7qd1ax48i7cpbxhs5l9mfpyn7m2lxsfqrl3z"; + }; + + sourceRoot = "."; + + nativeBuildInputs = [ unzip ]; + + buildPhase = '' + # according to official documentation + cc rasm_v*.c -O2 -lm -lrt -march=native -o rasm + ''; + + installPhase = '' + install -Dt $out/bin rasm + ''; + + meta = with stdenv.lib; { + homepage = "http://www.roudoudou.com/rasm/"; + description = "Z80 assembler"; + # use -n option to display all licenses + license = licenses.mit; # expat version + maintainers = [ maintainers.genesis ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/compilers/souffle/default.nix b/pkgs/development/compilers/souffle/default.nix index 33821bfc257..35ee7de7a2d 100644 --- a/pkgs/development/compilers/souffle/default.nix +++ b/pkgs/development/compilers/souffle/default.nix @@ -10,13 +10,13 @@ let in stdenv.mkDerivation rec { pname = "souffle"; - version = "1.7.0"; + version = "1.7.1"; src = fetchFromGitHub { owner = "souffle-lang"; repo = "souffle"; rev = version; - sha256 = "0q6cwfy3pwmaw3j1hhfk1ivcf03ijyvchyf92wdgrpj6q626kcpj"; + sha256 = "0px8kh5875q2iyza4ylpa6vxpy6qxg0qvn2idk1j6dcdf5pdryph"; }; nativeBuildInputs = [ autoreconfHook bison flex mcpp doxygen graphviz makeWrapper perl ]; diff --git a/pkgs/development/coq-modules/mathcomp/default.nix b/pkgs/development/coq-modules/mathcomp/default.nix index 6798236591c..3c0a9632c95 100644 --- a/pkgs/development/coq-modules/mathcomp/default.nix +++ b/pkgs/development/coq-modules/mathcomp/default.nix @@ -108,7 +108,7 @@ let ''; meta = with stdenv.lib; { - homepage = http://ssr.msr-inria.inria.fr/; + homepage = "https://math-comp.github.io/"; license = licenses.cecill-b; maintainers = [ maintainers.vbgl maintainers.jwiegley ]; platforms = coq.meta.platforms; diff --git a/pkgs/development/go-modules/generic/default.nix b/pkgs/development/go-modules/generic/default.nix index 9adebe51247..b3c583da51e 100644 --- a/pkgs/development/go-modules/generic/default.nix +++ b/pkgs/development/go-modules/generic/default.nix @@ -10,6 +10,9 @@ # A function to override the go-modules derivation , overrideModAttrs ? (_oldAttrs : {}) +# path to go.mod and go.sum directory +, modRoot ? "./" + # modSha256 is the sha256 of the vendored dependencies , modSha256 @@ -58,7 +61,7 @@ let export GOCACHE=$TMPDIR/go-cache export GOPATH="$TMPDIR/go" mkdir -p "''${GOPATH}/pkg/mod/cache/download" - + cd "${modRoot}" runHook postConfigure ''; @@ -98,8 +101,11 @@ let export GOCACHE=$TMPDIR/go-cache export GOPATH="$TMPDIR/go" + export GOSUMDB=off export GOPROXY=file://${go-modules} + cd "$modRoot" + runHook postConfigure ''; diff --git a/pkgs/development/go-packages/generic/default.nix b/pkgs/development/go-packages/generic/default.nix index b3386aaf24b..03d777d5c88 100644 --- a/pkgs/development/go-packages/generic/default.nix +++ b/pkgs/development/go-packages/generic/default.nix @@ -84,6 +84,8 @@ let GOHOSTARCH = go.GOHOSTARCH or null; GOHOSTOS = go.GOHOSTOS or null; + GO111MODULE = "off"; + GOARM = toString (stdenv.lib.intersectLists [(stdenv.hostPlatform.parsed.cpu.version or "")] ["5" "6" "7"]); configurePhase = args.configurePhase or '' diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix index 80fdb8a95e6..90030c0c8d1 100644 --- a/pkgs/development/haskell-modules/configuration-common.nix +++ b/pkgs/development/haskell-modules/configuration-common.nix @@ -394,6 +394,11 @@ self: super: { Random123 = dontCheck super.Random123; systemd = dontCheck super.systemd; + # use the correct version of network + systemd_2_2_0 = dontCheck (super.systemd_2_2_0.override { + network = self.network_3_1_1_1; + }); + # https://github.com/eli-frey/cmdtheline/issues/28 cmdtheline = dontCheck super.cmdtheline; @@ -1052,8 +1057,7 @@ self: super: { generateOptparseApplicativeCompletion "dhall" ( dontCheck super.dhall ); - dhall_1_27_0 = dontCheck super.dhall_1_27_0; - + dhall_1_28_0 = dontCheck super.dhall_1_28_0; # Missing test files in source distribution, fixed once 1.4.0 is bumped # https://github.com/dhall-lang/dhall-haskell/pull/997 @@ -1210,8 +1214,8 @@ self: super: { temporary-resourcet = doJailbreak super.temporary-resourcet; # Requires dhall >= 1.23.0 - ats-pkg = super.ats-pkg.override { dhall = self.dhall_1_27_0; }; - dhall-to-cabal = super.dhall-to-cabal.override { dhall = self.dhall_1_27_0; }; + ats-pkg = super.ats-pkg.override { dhall = self.dhall_1_28_0; }; + dhall-to-cabal = super.dhall-to-cabal.override { dhall = self.dhall_1_28_0; }; # Test suite doesn't work with current QuickCheck # https://github.com/pruvisto/heap/issues/11 @@ -1221,7 +1225,7 @@ self: super: { constraints-deriving = dontCheck super.constraints-deriving; # need newer version of ghc-libparser - hlint = super.hlint.override { ghc-lib-parser = self.ghc-lib-parser_8_8_1; }; + hlint = super.hlint.override { ghc-lib-parser = self.ghc-lib-parser_8_8_1_20191204; }; # https://github.com/sol/hpack/issues/366 hpack = self.hpack_0_33_0; @@ -1315,4 +1319,12 @@ self: super: { # https://github.com/kazu-yamamoto/dns/issues/150 dns = dontCheck super.dns; + # needs newer version of the systemd package + spacecookie = super.spacecookie.override { systemd = self.systemd_2_2_0; }; + + # ghcide needs the latest versions of haskell-lsp. + ghcide = super.ghcide.override { haskell-lsp = self.haskell-lsp_0_18_0_0; lsp-test = self.lsp-test_0_8_2_0; }; + haskell-lsp_0_18_0_0 = super.haskell-lsp_0_18_0_0.override { haskell-lsp-types = self.haskell-lsp-types_0_18_0_0; }; + lsp-test_0_8_2_0 = (dontCheck super.lsp-test_0_8_2_0).override { haskell-lsp = self.haskell-lsp_0_18_0_0; }; + } // import ./configuration-tensorflow.nix {inherit pkgs haskellLib;} self super diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix index e06b14944b0..b785c531479 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-8.8.x.nix @@ -67,32 +67,50 @@ self: super: { # TODO: remove when upstream accepts https://github.com/snapframework/io-streams-haproxy/pull/17 io-streams-haproxy = doJailbreak super.io-streams-haproxy; # base >=4.5 && <4.13 snap-server = doJailbreak super.snap-server; + xmobar = doJailbreak super.xmobar; # use latest version to fix the build - doctemplates = self.doctemplates_0_7_2; + brick = self.brick_0_50_1; + dbus = self.dbus_1_2_11; + doctemplates = self.doctemplates_0_8; + exact-pi = doJailbreak super.exact-pi; generics-sop = self.generics-sop_0_5_0_0; hackage-db = self.hackage-db_2_1_0; haddock-library = self.haddock-library_1_8_0; + haskell-src-meta = self.haskell-src-meta_0_8_5; + haskell-src-meta_0_8_5 = dontCheck super.haskell-src-meta_0_8_5; + HaTeX = self.HaTeX_3_22_0_0; HsYAML = self.HsYAML_0_2_1_0; + json-autotype = doJailbreak super.json-autotype; lens = self.lens_4_18_1; memory = self.memory_0_15_0; microlens = self.microlens_0_4_11_2; + microlens-ghc = self.microlens-ghc_0_4_11_1; + microlens-mtl = self.microlens-mtl_0_2_0_1; + microlens-platform = self.microlens-platform_0_4_0; + microlens-th = self.microlens-th_0_4_3_2; + network = self.network_3_1_1_1; optparse-applicative = self.optparse-applicative_0_15_1_0; - pandoc = self.pandoc_2_8_0_1; + pandoc = self.pandoc_2_9; pandoc-types = self.pandoc-types_1_20; prettyprinter = self.prettyprinter_1_5_1; primitive = dontCheck super.primitive_0_7_0_0; # evaluating the test suite gives an infinite recursion regex-base = self.regex-base_0_94_0_0; + regex-compat = self.regex-compat_0_95_2_0; regex-pcre-builtin = self.regex-pcre-builtin_0_95_1_1_8_43; regex-posix = self.regex-posix_0_96_0_0; - regex-tdfa = self.regex-tdfa_1_3_0; + regex-tdfa = self.regex-tdfa_1_3_1_0; shelly = self.shelly_1_9_0; + singletons = self.singletons_2_6; skylighting = self.skylighting_0_8_3; skylighting-core = self.skylighting-core_0_8_3; sop-core = self.sop-core_0_5_0_0; texmath = self.texmath_0_12; + th-desugar = self.th-desugar_1_10; tls = self.tls_1_5_2; trifecta = self.trifecta_2_1; + vty = self.vty_5_26; + xml-conduit = overrideCabal super.xml-conduit (drv: { version = "1.9.0.0"; sha256 = "1p57v127882rxvvmwjmvnqdmk3x2wg1z4d8y03849h0xaz1vid0w"; }); xmonad-contrib = self.xmonad-contrib_0_16; # These packages don't work and need patching and/or an update. @@ -105,12 +123,7 @@ self: super: { sha256 = "01b2gnsq0x4fd9na8zpk6pajym55mbz64hgzawlwxdw0y6681kr5"; }); foundation = dontCheck super.foundation; - haskell-src-meta = appendPatch (dontCheck (doJailbreak super.haskell-src-meta)) (pkgs.fetchpatch { - url = "https://gitlab.haskell.org/ghc/head.hackage/raw/master/patches/haskell-src-meta-0.8.3.patch"; - sha256 = "1asl932mibr5y057xx8v1a7n3qy87lcnclsfh8pbxq1m3iwjkxy8"; - }); vault = dontHaddock super.vault; - monad-par = dontCheck super.monad-par; # test suite does not compile in monad-par-0.3.4.8 # https://github.com/snapframework/snap-core/issues/288 snap-core = overrideCabal super.snap-core (drv: { prePatch = "substituteInPlace src/Snap/Internal/Core.hs --replace 'fail = Fail.fail' ''"; }); diff --git a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml index b8b38c77043..0645db14eb0 100644 --- a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml +++ b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml @@ -43,7 +43,7 @@ core-packages: - ghcjs-base-0 default-package-overrides: - # LTS Haskell 14.16 + # LTS Haskell 14.17 - abstract-deque ==0.3 - abstract-deque-tests ==0.3 - abstract-par ==0.3.3 @@ -176,7 +176,7 @@ default-package-overrides: - bencoding ==0.4.5.2 - between ==0.11.0.0 - bibtex ==0.1.0.6 - - bifunctors ==5.5.5 + - bifunctors ==5.5.6 - bimap ==0.4.0 - bimap-server ==0.1.0.1 - binary-bits ==0.5 @@ -222,7 +222,7 @@ default-package-overrides: - boltzmann-samplers ==0.1.1.0 - Boolean ==0.2.4 - boolean-like ==0.1.1.0 - - boolean-normal-forms ==0.0.1 + - boolean-normal-forms ==0.0.1.1 - boolsimplifier ==0.1.8 - boots ==0.0.100 - bordacount ==0.1.0.0 @@ -267,7 +267,7 @@ default-package-overrides: - cabal-doctest ==1.0.8 - cabal-file-th ==0.2.6 - cabal-rpm ==1.0.1 - - cache ==0.1.1.2 + - cache ==0.1.2.0 - cacophony ==0.10.1 - calendar-recycling ==0.0.0.1 - call-stack ==0.1.0 @@ -326,7 +326,7 @@ default-package-overrides: - classy-prelude ==1.5.0 - classy-prelude-conduit ==1.5.0 - classy-prelude-yesod ==1.5.0 - - clay ==0.13.2 + - clay ==0.13.3 - clientsession ==0.9.1.2 - Clipboard ==2.3.2.0 - clock ==0.8 @@ -355,7 +355,7 @@ default-package-overrides: - comfort-array ==0.4 - comfort-graph ==0.0.3.1 - commutative ==0.0.2 - - comonad ==5.0.5 + - comonad ==5.0.6 - compact ==0.1.0.1 - compactmap ==0.1.4.2.1 - compensated ==0.7.3 @@ -512,7 +512,7 @@ default-package-overrides: - dependent-sum-template ==0.0.0.6 - deque ==0.4.3 - deriveJsonNoPrefix ==0.1.0.1 - - deriving-compat ==0.5.7 + - deriving-compat ==0.5.8 - derulo ==1.0.7 - detour-via-sci ==1.0.0 - dhall ==1.24.0 @@ -684,7 +684,7 @@ default-package-overrides: - fixed-vector-hetero ==0.5.0.0 - flac ==0.2.0 - flac-picture ==0.1.2 - - flags-applicative ==0.1.0.1 + - flags-applicative ==0.1.0.2 - flat-mcmc ==1.5.0 - flay ==0.4 - flexible-defaults ==0.0.3 @@ -707,11 +707,11 @@ default-package-overrides: - force-layout ==0.4.0.6 - foreign-store ==0.2 - forkable-monad ==0.2.0.3 - - forma ==1.1.2 + - forma ==1.1.3 - format-numbers ==0.1.0.0 - formatting ==6.3.7 - foundation ==0.0.25 - - free ==5.1.2 + - free ==5.1.3 - freenect ==1.2.1 - freer-simple ==1.2.1.1 - freetype2 ==0.1.2 @@ -770,7 +770,7 @@ default-package-overrides: - ghc-compact ==0.1.0.0 - ghc-core ==0.5.6 - ghc-exactprint ==0.6.1 - - ghcid ==0.7.6 + - ghcid ==0.7.7 - ghci-hexcalc ==0.1.1.0 - ghcjs-codemirror ==0.0.0.2 - ghc-lib ==8.8.0.20190424 @@ -854,7 +854,7 @@ default-package-overrides: - HandsomeSoup ==0.4.2 - hapistrano ==0.3.10.0 - happy ==1.19.12 - - hasbolt ==0.1.3.5 + - hasbolt ==0.1.3.6 - hashable ==1.2.7.0 - hashable-time ==0.2.0.2 - hashids ==1.0.2.4 @@ -875,7 +875,7 @@ default-package-overrides: - haskell-src-meta ==0.8.3 - haskey-btree ==0.3.0.1 - haskintex ==0.8.0.0 - - haskoin-core ==0.9.6 + - haskoin-core ==0.9.7 - hasql ==1.4.0.1 - hasql-optparse-applicative ==0.3.0.5 - hasql-pool ==0.5.1 @@ -895,7 +895,7 @@ default-package-overrides: - hedgehog ==1.0.1 - hedgehog-corpus ==0.1.0 - hedgehog-fn ==1.0 - - hedis ==0.12.9 + - hedis ==0.12.10 - hedn ==0.2.0.1 - here ==1.2.13 - heredoc ==0.2.0.0 @@ -929,7 +929,7 @@ default-package-overrides: - hmpfr ==0.4.4 - hoauth2 ==1.8.9 - Hoed ==0.5.1 - - hOpenPGP ==2.8.4 + - hOpenPGP ==2.8.5 - hopenpgp-tools ==0.21.3 - hopfli ==0.2.2.1 - hosc ==0.17 @@ -1028,7 +1028,7 @@ default-package-overrides: - hvect ==0.4.0.0 - hvega ==0.3.0.1 - hw-balancedparens ==0.2.0.4 - - hw-bits ==0.7.0.8 + - hw-bits ==0.7.1.0 - hw-conduit ==0.2.0.6 - hw-conduit-merges ==0.2.0.0 - hw-diagnostics ==0.0.0.7 @@ -1049,7 +1049,7 @@ default-package-overrides: - hw-parser ==0.1.0.2 - hw-prim ==0.6.2.39 - hw-rankselect ==0.13.0.0 - - hw-rankselect-base ==0.3.2.3 + - hw-rankselect-base ==0.3.3.0 - hw-simd ==0.1.1.5 - hw-streams ==0.0.0.12 - hw-string-parse ==0.0.0.4 @@ -1087,7 +1087,7 @@ default-package-overrides: - indexed ==0.1.3 - indexed-list-literals ==0.2.1.2 - infer-license ==0.2.0 - - inflections ==0.4.0.4 + - inflections ==0.4.0.5 - influxdb ==1.7.1.1 - ini ==0.4.1 - inj ==1.0 @@ -1124,7 +1124,7 @@ default-package-overrides: - io-streams-haproxy ==1.0.1.0 - ip ==1.5.1 - ip6addr ==1.0.0 - - iproute ==1.7.7 + - iproute ==1.7.8 - IPv6Addr ==1.1.2 - ipynb ==0.1 - ipython-kernel ==0.10.1.0 @@ -1228,14 +1228,14 @@ default-package-overrides: - LibZip ==1.0.1 - lifted-async ==0.10.0.4 - lifted-base ==0.2.3.12 - - lift-generics ==0.1.2 + - lift-generics ==0.1.3 - line ==4.0.1 - linear ==1.20.9 - linear-circuit ==0.1.0.2 - linux-file-extents ==0.2.0.0 - linux-namespaces ==0.1.3.0 - List ==0.6.2 - - ListLike ==4.6.2 + - ListLike ==4.6.3 - listsafe ==0.1.0.1 - list-t ==1.0.4 - ListTree ==0.2.3 @@ -1278,7 +1278,7 @@ default-package-overrides: - markdown ==0.1.17.4 - markdown-unlit ==0.5.0 - markov-chain ==0.0.3.4 - - massiv ==0.4.3.0 + - massiv ==0.4.4.0 - massiv-io ==0.1.9.0 - massiv-test ==0.1.1 - mathexpr ==0.3.0.0 @@ -1297,7 +1297,7 @@ default-package-overrides: - megaparsec-tests ==7.0.5 - mega-sdist ==0.4.0.1 - memory ==0.14.18 - - MemoTrie ==0.6.9 + - MemoTrie ==0.6.10 - menshen ==0.0.3 - mercury-api ==0.1.0.2 - merkle-tree ==0.1.1 @@ -1348,10 +1348,10 @@ default-package-overrides: - monad-extras ==0.6.0 - monadic-arrays ==0.2.2 - monad-journal ==0.8.1 - - monad-logger ==0.3.30 + - monad-logger ==0.3.31 - monad-logger-json ==0.1.0.0 - monad-logger-prefix ==0.1.11 - - monad-logger-syslog ==0.1.5.0 + - monad-logger-syslog ==0.1.6.0 - monad-loops ==0.4.3 - monad-memo ==0.5.1 - monad-metrics ==0.2.1.4 @@ -1412,7 +1412,7 @@ default-package-overrides: - natural-sort ==0.1.2 - natural-transformation ==0.4 - ndjson-conduit ==0.1.0.5 - - neat-interpolation ==0.3.2.4 + - neat-interpolation ==0.3.2.5 - netlib-carray ==0.1 - netlib-comfort-array ==0.0.0.1 - netlib-ffi ==0.1.1 @@ -1426,7 +1426,7 @@ default-package-overrides: - network-anonymous-i2p ==0.10.0 - network-attoparsec ==0.12.2 - network-bsd ==2.8.0.0 - - network-byte-order ==0.1.1.1 + - network-byte-order ==0.1.2.0 - network-conduit-tls ==1.3.2 - network-house ==0.1.0.2 - network-info ==0.2.0.10 @@ -1486,7 +1486,7 @@ default-package-overrides: - open-browser ==0.2.1.0 - openexr-write ==0.1.0.2 - OpenGL ==3.0.3.0 - - OpenGLRaw ==3.3.3.0 + - OpenGLRaw ==3.3.4.0 - openpgp-asciiarmor ==0.1.2 - opensource ==0.1.1.0 - openssl-streams ==1.2.2.0 @@ -1574,7 +1574,7 @@ default-package-overrides: - phantom-state ==0.2.1.2 - pid1 ==0.1.2.0 - pinboard ==0.10.1.4 - - pipes ==4.3.12 + - pipes ==4.3.13 - pipes-aeson ==0.4.1.8 - pipes-attoparsec ==0.5.1.5 - pipes-binary ==0.4.2 @@ -1613,7 +1613,7 @@ default-package-overrides: - port-utils ==0.2.1.0 - posix-paths ==0.2.1.6 - possibly ==1.0.0.0 - - postgresql-binary ==0.12.1.3 + - postgresql-binary ==0.12.2 - postgresql-libpq ==0.9.4.2 - postgresql-orm ==0.5.1 - postgresql-schema ==0.1.14 @@ -1661,8 +1661,8 @@ default-package-overrides: - prospect ==0.1.0.0 - protobuf ==0.2.1.2 - protobuf-simple ==0.1.1.0 - - protocol-buffers ==2.4.12 - - protocol-buffers-descriptor ==2.4.12 + - protocol-buffers ==2.4.13 + - protocol-buffers-descriptor ==2.4.13 - protocol-radius ==0.0.1.1 - protocol-radius-test ==0.1.0.1 - proto-lens ==0.5.1.0 @@ -1708,7 +1708,7 @@ default-package-overrides: - rando ==0.0.0.4 - random ==1.1 - random-bytestring ==0.1.3.2 - - random-fu ==0.2.7.0 + - random-fu ==0.2.7.3 - random-shuffle ==0.0.4 - random-source ==0.3.0.6 - random-tree ==0.6.0.5 @@ -1717,7 +1717,7 @@ default-package-overrides: - range-set-list ==0.1.3.1 - rank1dynamic ==0.4.0 - rank2classes ==1.3.1.2 - - Rasterific ==0.7.4.4 + - Rasterific ==0.7.5 - rasterific-svg ==0.3.3.2 - ratel ==1.0.9 - ratel-wai ==1.1.1 @@ -1735,7 +1735,7 @@ default-package-overrides: - reanimate ==0.1.8.0 - reanimate-svg ==0.9.3.1 - rebase ==1.3.1.1 - - record-dot-preprocessor ==0.2.1 + - record-dot-preprocessor ==0.2.2 - record-hasfield ==1.0 - records-sop ==0.1.0.3 - recursion-schemes ==5.1.3 @@ -1804,7 +1804,7 @@ default-package-overrides: - runmemo ==1.0.0.1 - rvar ==0.2.0.3 - s3-signer ==0.5.0.0 - - safe ==0.3.17 + - safe ==0.3.18 - safecopy ==0.9.4.3 - safe-exceptions ==0.1.7.0 - safe-exceptions-checked ==0.1.0 @@ -1847,7 +1847,7 @@ default-package-overrides: - selective ==0.3 - semialign ==1 - semigroupoid-extras ==5 - - semigroupoids ==5.3.3 + - semigroupoids ==5.3.4 - semigroups ==0.18.5 - semirings ==0.4.2 - semiring-simple ==1.0.0.1 @@ -2131,7 +2131,7 @@ default-package-overrides: - these ==1.0.1 - th-expand-syns ==0.4.5.0 - th-extras ==0.0.0.4 - - th-lift ==0.8.0.1 + - th-lift ==0.8.1 - th-lift-instances ==0.1.14 - th-nowq ==0.1.0.3 - th-orphans ==0.13.9 @@ -2278,7 +2278,7 @@ default-package-overrides: - users-test ==0.5.0.1 - utf8-light ==0.4.2 - utf8-string ==1.0.1.1 - - util ==0.1.14.0 + - util ==0.1.14.1 - utility-ht ==0.0.14 - uuid ==1.3.13 - uuid-types ==1.0.3 @@ -2298,7 +2298,7 @@ default-package-overrides: - vault ==0.3.1.3 - vec ==0.1.1.1 - vector ==0.12.0.3 - - vector-algorithms ==0.8.0.1 + - vector-algorithms ==0.8.0.3 - vector-binary-instances ==0.2.5.1 - vector-buffer ==0.4.1 - vector-builder ==0.3.8 @@ -2357,7 +2357,7 @@ default-package-overrides: - webrtc-vad ==0.1.0.3 - websockets ==0.12.6.1 - websockets-snap ==0.10.3.1 - - weigh ==0.0.14 + - weigh ==0.0.16 - wide-word ==0.1.0.9 - wikicfp-scraper ==0.1.0.11 - wild-bind ==0.1.2.4 @@ -2397,7 +2397,7 @@ default-package-overrides: - Xauth ==0.1 - xdg-basedir ==0.2.2 - xdg-userdirs ==0.1.0.2 - - xeno ==0.3.5.1 + - xeno ==0.3.5.2 - xenstore ==0.1.1 - xls ==0.1.2 - xlsx ==0.7.2 @@ -2434,7 +2434,7 @@ default-package-overrides: - yesod-auth-hashdb ==1.7.1.1 - yesod-auth-oauth2 ==0.6.1.2 - yesod-bin ==1.6.0.4 - - yesod-core ==1.6.16.1 + - yesod-core ==1.6.17 - yesod-csp ==0.2.5.0 - yesod-eventsource ==1.6.0 - yesod-fb ==0.5.0 @@ -2448,7 +2448,7 @@ default-package-overrides: - yesod-recaptcha2 ==0.3.0 - yesod-sitemap ==1.6.0 - yesod-static ==1.6.0.1 - - yesod-test ==1.6.8 + - yesod-test ==1.6.9 - yesod-text-markdown ==0.1.10 - yesod-websockets ==0.3.0.2 - yes-precure5-command ==5.5.3 @@ -3657,7 +3657,6 @@ broken-packages: - classy-miso - classy-parallel - ClassyPrelude - - clay - clckwrks - clckwrks-cli - clckwrks-dot-com @@ -4192,6 +4191,7 @@ broken-packages: - dhall-lsp-server - dhall-nix - dhall-to-cabal + - dhall-yaml - dhcp-lease-parser - dhrun - dia-base @@ -4796,6 +4796,7 @@ broken-packages: - foscam-sort - Foster - fpco-api + - fplll - fpnla-examples - FPretty - fptest @@ -5013,7 +5014,6 @@ broken-packages: - ghci-lib - ghci-ng - ghci-pretty - - ghcide - ghcjs-base-stub - ghcjs-dom-jsffi - ghcjs-fetch @@ -7075,6 +7075,7 @@ broken-packages: - mangopay - manifold-random - manifolds + - Map - map-exts - map-reduce-folds - map-syntax @@ -7099,6 +7100,7 @@ broken-packages: - marxup - masakazu-bot - MASMGen + - mason - massiv - massiv-io - massiv-test @@ -8017,6 +8019,7 @@ broken-packages: - polh-lexicon - polimorf - Pollutocracy + - poly - poly-control - polydata - polydata-core @@ -8399,6 +8402,7 @@ broken-packages: - reflex-dom-svg - reflex-gloss - reflex-gloss-scene + - reflex-libtelnet - reflex-orphans - reflex-sdl2 - reflex-transformers @@ -8657,7 +8661,6 @@ broken-packages: - savage - sax - SBench - - sbv - sbvPlugin - sc2-lowlevel - sc2-proto @@ -9107,7 +9110,6 @@ broken-packages: - SourceGraph - sousit - soyuz - - spacecookie - SpaceInvaders - spacepart - SpacePrivateers @@ -9196,6 +9198,7 @@ broken-packages: - stack-run - stack-run-auto - stack-type + - stack-wrapper - stack2cabal - stack2nix - stackage @@ -9966,6 +9969,7 @@ broken-packages: - vector-space-opengl - vector-static - vectortiles + - venzone - Verba - verbalexpressions - verdict diff --git a/pkgs/development/haskell-modules/configuration-nix.nix b/pkgs/development/haskell-modules/configuration-nix.nix index b31ed9af71b..472e4c66fc7 100644 --- a/pkgs/development/haskell-modules/configuration-nix.nix +++ b/pkgs/development/haskell-modules/configuration-nix.nix @@ -645,7 +645,7 @@ self: super: builtins.intersectAttrs super { # LTS-14. spagoWithOverrides = doJailbreak (super.spago.override { # spago requires the latest version of dhall. - directory = self.dhall_1_27_0; + directory = self.dhall_1_28_0; }); docsSearchAppJsFile = pkgs.fetchurl { diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix index c343821f2d9..0ec409dc8ed 100644 --- a/pkgs/development/haskell-modules/hackage-packages.nix +++ b/pkgs/development/haskell-modules/hackage-packages.nix @@ -756,18 +756,21 @@ self: { }) {}; "AesonBson" = callPackage - ({ mkDerivation, aeson, attoparsec, base, bson, hspec, HUnit, text - , unordered-containers, vector + ({ mkDerivation, aeson, attoparsec, base, bson, hspec, HUnit + , QuickCheck, scientific, text, unordered-containers, vector }: mkDerivation { pname = "AesonBson"; - version = "0.2.2"; - sha256 = "1p7636bjczcwwi2c0cdzvpj95vx2fr27qnmh8pcs8hqgmisagq8s"; + version = "0.4.0"; + sha256 = "08ffz1fr8x5z3ipvk99wc5n363ghxrq1z0cv1yh57wx18ialk1cx"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - aeson attoparsec base bson unordered-containers vector + aeson attoparsec base bson scientific text unordered-containers + vector + ]; + testHaskellDepends = [ + aeson base bson hspec HUnit QuickCheck scientific text ]; - testHaskellDepends = [ aeson base bson hspec HUnit text ]; description = "Mapping between Aeson's JSON and Bson objects"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; @@ -1438,7 +1441,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) db; inherit (pkgs) dbxml; + }) {inherit (pkgs) db; inherit (pkgs) dbxml; inherit (pkgs) xercesc; inherit (pkgs) xqilla;}; "BerlekampAlgorithm" = callPackage @@ -2631,10 +2634,10 @@ self: { license = "GPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {opencv_calib3d = null; opencv_contrib = null; - opencv_core = null; opencv_features2d = null; opencv_flann = null; - opencv_gpu = null; opencv_highgui = null; opencv_imgproc = null; - opencv_legacy = null; opencv_ml = null; opencv_objdetect = null; + }) {opencv_calib3d = null; opencv_contrib = null; + opencv_core = null; opencv_features2d = null; opencv_flann = null; + opencv_gpu = null; opencv_highgui = null; opencv_imgproc = null; + opencv_legacy = null; opencv_ml = null; opencv_objdetect = null; opencv_video = null;}; "Cabal_2_2_0_1" = callPackage @@ -5211,12 +5214,13 @@ self: { }) {}; "Enum" = callPackage - ({ mkDerivation, base }: + ({ mkDerivation, base, smallcheck, tasty, tasty-hunit }: mkDerivation { pname = "Enum"; - version = "0.1.0.0"; - sha256 = "1zl5w5w3rqbh4awp4b4rbamkqcvnrzn944rjc84sq3rqad3wlww2"; + version = "0.2.0.0"; + sha256 = "0bk44zim92b5qb95byvcyy8cmbgzbxf06mp0nr765p9v48rjkr91"; libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base smallcheck tasty tasty-hunit ]; description = "Non-crashing `Enum` operations"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -6466,7 +6470,7 @@ self: { librarySystemDepends = [ libGL libX11 libXext libXfixes ]; description = "A Haskell binding for GLFW"; license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; + }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXext; inherit (pkgs.xorg) libXfixes;}; "GLFW-OGL" = callPackage @@ -7829,7 +7833,7 @@ self: { license = "LGPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {mysqlclient = null; inherit (pkgs) openssl; + }) {mysqlclient = null; inherit (pkgs) openssl; inherit (pkgs) zlib;}; "HDBC-odbc" = callPackage @@ -8133,7 +8137,7 @@ self: { description = "A Toolset for the Haskell Game Programmer - CEGUI Bindings"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {CEGUIBase = null; CEGUIOgreRenderer = null; + }) {CEGUIBase = null; CEGUIOgreRenderer = null; hg3dcegui050 = null;}; "HGamer3D-Common" = callPackage @@ -8285,8 +8289,8 @@ self: { description = "Ogre Binding for HGamer3D"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {OgreMain = null; OgrePaging = null; OgreProperty = null; - OgreRTShaderSystem = null; OgreTerrain = null; + }) {OgreMain = null; OgrePaging = null; OgreProperty = null; + OgreRTShaderSystem = null; OgreTerrain = null; hg3dogre050 = null;}; "HGamer3D-SDL2-Binding" = callPackage @@ -8304,7 +8308,7 @@ self: { description = "SDL2 Binding for HGamer3D"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {inherit (pkgs) SDL2; hg3dsdl2050 = null; + }) {inherit (pkgs) SDL2; hg3dsdl2050 = null; inherit (pkgs.xorg) libX11;}; "HGamer3D-SFML-Binding" = callPackage @@ -8322,7 +8326,7 @@ self: { description = "SFML Binding for HGamer3D"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {hg3dsfml050 = null; sfml-audio = null; sfml-network = null; + }) {hg3dsfml050 = null; sfml-audio = null; sfml-network = null; sfml-system = null; sfml-window = null;}; "HGamer3D-WinEvent" = callPackage @@ -9231,7 +9235,7 @@ self: { license = stdenv.lib.licenses.lgpl21; }) {}; - "HTF_0_14_0_1" = callPackage + "HTF_0_14_0_3" = callPackage ({ mkDerivation, aeson, aeson-pretty, array, base , base64-bytestring, bytestring, Cabal, containers, cpphs, Diff , directory, filepath, haskell-src, HUnit, lifted-base @@ -9241,8 +9245,8 @@ self: { }: mkDerivation { pname = "HTF"; - version = "0.14.0.1"; - sha256 = "025gcc77j547713bxm8y2i7xmq95nc4imyym6agmfrd7bh8h1jdb"; + version = "0.14.0.3"; + sha256 = "138gh5a2nx25czhp9qpaav2lq7ff142q4n6sbkrglfsyn48rifqp"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal process ]; @@ -12482,27 +12486,6 @@ self: { }: mkDerivation { pname = "ListLike"; - version = "4.6.2"; - sha256 = "0m65x8yaq7q50gznln8mga2wrc8cvjx6gw9rim8s7xqcrx6y5zjh"; - libraryHaskellDepends = [ - array base bytestring containers deepseq dlist fmlist text - utf8-string vector - ]; - testHaskellDepends = [ - array base bytestring containers dlist fmlist HUnit QuickCheck - random text utf8-string vector - ]; - description = "Generalized support for list-like structures"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "ListLike_4_6_3" = callPackage - ({ mkDerivation, array, base, bytestring, containers, deepseq - , dlist, fmlist, HUnit, QuickCheck, random, text, utf8-string - , vector - }: - mkDerivation { - pname = "ListLike"; version = "4.6.3"; sha256 = "10vn7gslx4zzjq547cwpzdfb4c5w3nsfis6qr03dr9c4fdzj61lx"; libraryHaskellDepends = [ @@ -12515,7 +12498,6 @@ self: { ]; description = "Generalized support for list-like structures"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "ListT" = callPackage @@ -12947,14 +12929,16 @@ self: { }: mkDerivation { pname = "Map"; - version = "0.1.3.1"; - sha256 = "1a5pygjxk839lxx6pavq72fl35sk53zq10q1ivsm309xrvq93pki"; + version = "0.1.3.2"; + sha256 = "03bc7mswiw5n76g34pll6dgz7f46l9gafl1bfanv74p21xjr829g"; libraryHaskellDepends = [ base containers either-both filtrable util ]; testHaskellDepends = [ base smallcheck tasty tasty-smallcheck ]; description = "Class of key-value maps"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; }) {}; "Mapping" = callPackage @@ -13088,8 +13072,8 @@ self: { ({ mkDerivation, base, newtype-generics }: mkDerivation { pname = "MemoTrie"; - version = "0.6.9"; - sha256 = "157p0pi6rrq74a35mq6zkkycv4ah7xhkbrcmnkb9xf7pznw4aq0x"; + version = "0.6.10"; + sha256 = "0lxsarhyhhkp58wpbp7b08scmjxq7s46jfl9vhp2yfq973hz0kaq"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base newtype-generics ]; @@ -14100,8 +14084,8 @@ self: { }: mkDerivation { pname = "Network-NineP"; - version = "0.4.5"; - sha256 = "1s11idqg8bvimhal86569wlw746cyyq67dxvvabnbn3q23mjkflh"; + version = "0.4.6"; + sha256 = "0aq8888z0fcsd18shsqjsgrpxm417cfh250vyd2660ajc0ymj3q3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -14555,8 +14539,8 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {comctl32 = null; comdlg32 = null; gdi32 = null; - kernel32 = null; ole32 = null; shell32 = null; user32 = null; + }) {comctl32 = null; comdlg32 = null; gdi32 = null; + kernel32 = null; ole32 = null; shell32 = null; user32 = null; winmm = null; winspool = null;}; "ObjectName" = callPackage @@ -14839,8 +14823,8 @@ self: { }: mkDerivation { pname = "OpenGLRaw"; - version = "3.3.3.0"; - sha256 = "0zgllb4bcash2i2cispa3j565aw3dpxs41ghmhpvyvi4a6xmyldx"; + version = "3.3.4.0"; + sha256 = "0gmsmysqzpm13qnyq4vvqxm4dzw25nayfd9wi5x645pympm6jqbm"; libraryHaskellDepends = [ base bytestring containers fixed half text transformers ]; @@ -15126,6 +15110,8 @@ self: { pname = "PSQueue"; version = "1.1.0.1"; sha256 = "1cik7sw10sacsijmfhghzy54gm1qcyxw14shlp86lx8z89kcnkza"; + revision = "1"; + editedCabalFile = "0pswr49mg0ww0w579w4qsv5hjgcnsswdi283lxk6cvxw3wafif07"; libraryHaskellDepends = [ base ]; description = "Priority Search Queue"; license = stdenv.lib.licenses.bsd3; @@ -16726,8 +16712,8 @@ self: { }: mkDerivation { pname = "Rasterific"; - version = "0.7.4.4"; - sha256 = "1s8d0yyh2xz8kb9476nr11jzxvgq0y9sgspgzhh9shf44fbz4gs0"; + version = "0.7.5"; + sha256 = "158s0w95x0yxhffcccvhil827jmv7mmbh65nbg8qypvw9j4ldb9j"; libraryHaskellDepends = [ base bytestring containers dlist FontyFruity free JuicyPixels mtl primitive transformers vector vector-algorithms @@ -17169,9 +17155,9 @@ self: { license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {csfml-audio = null; csfml-graphics = null; - csfml-network = null; csfml-system = null; csfml-window = null; - sfml-audio = null; sfml-graphics = null; sfml-network = null; + }) {csfml-audio = null; csfml-graphics = null; + csfml-network = null; csfml-system = null; csfml-window = null; + sfml-audio = null; sfml-graphics = null; sfml-network = null; sfml-system = null; sfml-window = null;}; "SFML-control" = callPackage @@ -20735,8 +20721,8 @@ self: { ]; description = "A binding to the X11 graphics library"; license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXScrnSaver; - inherit (pkgs.xorg) libXext; inherit (pkgs.xorg) libXinerama; + }) {inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXScrnSaver; + inherit (pkgs.xorg) libXext; inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXrender;}; "X11-extras" = callPackage @@ -23167,22 +23153,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "advent-of-code-api_0_2_4_2" = callPackage + "advent-of-code-api_0_2_7_0" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, deepseq , directory, filepath, finite-typelits, http-api-data, http-client , http-client-tls, http-media, HUnit, megaparsec, mtl, profunctors , servant, servant-client, servant-client-core, stm, tagsoup, text - , time + , time, time-compat }: mkDerivation { pname = "advent-of-code-api"; - version = "0.2.4.2"; - sha256 = "01mw95ygb20bg6fs9bda1fr7z05h2sinmycpvi0ccid5qci57fa3"; + version = "0.2.7.0"; + sha256 = "0a1h2kwmfnhs1sj7wmnc4hgfwq45d8xl2ah0s6432k13v8lfpxwr"; libraryHaskellDepends = [ aeson base bytestring containers deepseq directory filepath finite-typelits http-api-data http-client http-client-tls http-media megaparsec mtl profunctors servant servant-client - servant-client-core stm tagsoup text time + servant-client-core stm tagsoup text time time-compat ]; testHaskellDepends = [ base directory filepath HUnit text ]; description = "Advent of Code REST API bindings and servant API"; @@ -23509,8 +23495,8 @@ self: { }: mkDerivation { pname = "aeson-filthy"; - version = "0.1.3"; - sha256 = "121ygm5k9qjizwjj7w5dklxs5sv0zysrnpvwb37ar4bjkcxhs0ap"; + version = "0.1.4"; + sha256 = "1mjlgq1h09plpllmh7manbcjnl57pmjap0kz9ahzrpv02zrfkszi"; libraryHaskellDepends = [ aeson base bytestring text time unordered-containers ]; @@ -24089,8 +24075,8 @@ self: { }: mkDerivation { pname = "aeson-yaml"; - version = "1.0.4.0"; - sha256 = "0r42pc7k1bxdwkhcmli9rngymdfk9a84jzkh36scf3gm4fnxlvbs"; + version = "1.0.5.0"; + sha256 = "0cx54xqv2w4lcnnmcwapbizxjzxaf0x2xbr7lbhcy380nx99pi73"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -28180,18 +28166,18 @@ self: { "amqp-utils" = callPackage ({ mkDerivation, amqp, base, bytestring, connection, containers - , data-default-class, hinotify, magic, process, text, time, tls - , unix, x509-system + , data-default-class, hinotify, magic, network, process, text, time + , tls, unix, x509-system }: mkDerivation { pname = "amqp-utils"; - version = "0.4.0.0"; - sha256 = "0x56yif31bkf01993xh7qvd775c9k8sc6db0ghg8yd10l9fnr92c"; + version = "0.4.1.0"; + sha256 = "1p0pvl88xp9m0b9k7nqxln3702kp4lk05f60mag3swa09rvzcg47"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ amqp base bytestring connection containers data-default-class - hinotify magic process text time tls unix x509-system + hinotify magic network process text time tls unix x509-system ]; description = "Generic Haskell AMQP tools"; license = stdenv.lib.licenses.gpl3; @@ -28779,8 +28765,10 @@ self: { }: mkDerivation { pname = "ansi-terminal-game"; - version = "0.7.2.0"; - sha256 = "041xw7kq620ydnbdawmsdb65021p2534f9725qddv1i0pcwdn274"; + version = "1.0.0.0"; + sha256 = "0h33ih7sxzyp1a6r6ivk73lrfx6haxxzmgh56n75sa7p8vhr8f1i"; + revision = "1"; + editedCabalFile = "1x601p97ragf9k56qy1ndmn7g3brs8fvvmf1wcrxz1ynhndqqpjw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -30589,6 +30577,8 @@ self: { pname = "arbor-monad-logger"; version = "0.1.1.3"; sha256 = "1x44kavmgm7nffvnakyrmcxq03vshg15vkk8wcpvkq43dndk9jb2"; + revision = "1"; + editedCabalFile = "0srypscv4gd1q2h6namm507211xd3cnqv144h2pb1mayy20m9a8m"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -32947,19 +32937,19 @@ self: { "ats-format" = callPackage ({ mkDerivation, ansi-wl-pprint, base, Cabal, cli-setup, directory - , file-embed, filepath, language-ats, optparse-applicative, process - , text, toml-parser + , filepath, language-ats, optparse-applicative, process, text + , toml-parser }: mkDerivation { pname = "ats-format"; - version = "0.2.0.35"; - sha256 = "02lqpvfqmz99k5ywim9badn22y18qqss2q21ibj79l1lljw4sqss"; + version = "0.2.0.36"; + sha256 = "1a7mfpqc09lfk1pp237f2wrizgm2c1indgjdi810599ns19hicd2"; isLibrary = false; isExecutable = true; setupHaskellDepends = [ base Cabal cli-setup filepath ]; executableHaskellDepends = [ - ansi-wl-pprint base directory file-embed language-ats - optparse-applicative process text toml-parser + ansi-wl-pprint base directory language-ats optparse-applicative + process text toml-parser ]; description = "A source-code formatter for ATS"; license = stdenv.lib.licenses.bsd3; @@ -34059,7 +34049,7 @@ self: { license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {aviation-cessna172-weight-balance = null; + }) {aviation-cessna172-weight-balance = null; aviation-units = null; aviation-weight-balance = null;}; "avl-static" = callPackage @@ -37732,28 +37722,6 @@ self: { }: mkDerivation { pname = "bifunctors"; - version = "5.5.5"; - sha256 = "0rn47q8dzv0g1fyams99p4py6q0asxdc50q9k0nj497brk738xcb"; - libraryHaskellDepends = [ - base base-orphans comonad containers tagged template-haskell - th-abstraction transformers - ]; - testHaskellDepends = [ - base hspec QuickCheck template-haskell transformers - transformers-compat - ]; - testToolDepends = [ hspec-discover ]; - description = "Bifunctors"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "bifunctors_5_5_6" = callPackage - ({ mkDerivation, base, base-orphans, comonad, containers, hspec - , hspec-discover, QuickCheck, tagged, template-haskell - , th-abstraction, transformers, transformers-compat - }: - mkDerivation { - pname = "bifunctors"; version = "5.5.6"; sha256 = "1jnsnc0rj3vkx8rjwsf2aacla9xzdfy1am9mmjk8crxp2gkazcnc"; libraryHaskellDepends = [ @@ -37767,7 +37735,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "Bifunctors"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "bighugethesaurus" = callPackage @@ -37865,7 +37832,7 @@ self: { license = "LGPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {leksah-dummy = null; leksah-main = null; + }) {leksah-dummy = null; leksah-main = null; leksah-plugin-pane = null;}; "billeksah-pane" = callPackage @@ -37963,6 +37930,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "bin" = callPackage + ({ mkDerivation, base, dec, deepseq, fin, hashable, QuickCheck }: + mkDerivation { + pname = "bin"; + version = "0.1"; + sha256 = "008i0yxvg9v05gby6ysq3f7ygh125p9xa5vwrcrbq5xw79igyzq5"; + libraryHaskellDepends = [ + base dec deepseq fin hashable QuickCheck + ]; + description = "Bin: binary natural numbers"; + license = stdenv.lib.licenses.gpl2Plus; + }) {}; + "binary_0_7_6_1" = callPackage ({ mkDerivation, array, attoparsec, base, bytestring, Cabal, cereal , containers, criterion, deepseq, directory, filepath, HUnit, mtl @@ -38649,10 +38629,10 @@ self: { ]; description = "Low-level bindings to GLFW OpenGL library"; license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; - inherit (pkgs.xorg) libXcursor; inherit (pkgs.xorg) libXext; - inherit (pkgs.xorg) libXfixes; inherit (pkgs.xorg) libXi; - inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; + }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; + inherit (pkgs.xorg) libXcursor; inherit (pkgs.xorg) libXext; + inherit (pkgs.xorg) libXfixes; inherit (pkgs.xorg) libXi; + inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXxf86vm;}; "bindings-GLFW_3_3_0_0" = callPackage @@ -38675,10 +38655,10 @@ self: { description = "Low-level bindings to GLFW OpenGL library"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; - inherit (pkgs.xorg) libXcursor; inherit (pkgs.xorg) libXext; - inherit (pkgs.xorg) libXfixes; inherit (pkgs.xorg) libXi; - inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; + }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; + inherit (pkgs.xorg) libXcursor; inherit (pkgs.xorg) libXext; + inherit (pkgs.xorg) libXfixes; inherit (pkgs.xorg) libXi; + inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXxf86vm;}; "bindings-K8055" = callPackage @@ -39209,8 +39189,8 @@ self: { ({ mkDerivation, base, bindings-DSL, portaudio, vector }: mkDerivation { pname = "bindings-portaudio"; - version = "0.2"; - sha256 = "0jxpp8iwb6v0g0y81vnqxqycfh4gzykq4ijn4ir8hzajy7bglb1n"; + version = "0.2.1"; + sha256 = "1i2r01jhf8k7820zzwqbss0z3kxd15pvdz7ss8s9gczv88nwxvxk"; libraryHaskellDepends = [ base bindings-DSL vector ]; libraryPkgconfigDepends = [ portaudio ]; description = "Low-level bindings to portaudio library"; @@ -40318,6 +40298,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "bits-extra_0_0_1_5" = callPackage + ({ mkDerivation, base, criterion, doctest, doctest-discover + , ghc-prim, hedgehog, hspec, hspec-discover, hw-hedgehog + , hw-hspec-hedgehog, vector + }: + mkDerivation { + pname = "bits-extra"; + version = "0.0.1.5"; + sha256 = "1f29jn8gxmi9nrwnrykq4z88cg8zsknbw7licmf44hlid0s5glf5"; + libraryHaskellDepends = [ base ghc-prim vector ]; + testHaskellDepends = [ + base doctest doctest-discover ghc-prim hedgehog hspec hw-hedgehog + hw-hspec-hedgehog + ]; + testToolDepends = [ doctest-discover hspec-discover ]; + benchmarkHaskellDepends = [ base criterion ghc-prim vector ]; + description = "Useful bitwise operations"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "bits-extras" = callPackage ({ mkDerivation, base, gcc_s }: mkDerivation { @@ -41771,25 +41772,26 @@ self: { "boltzmann-brain" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, directory - , edit-distance, graphviz, haskell-src-exts, hmatrix, megaparsec - , MonadRandom, mtl, multiset, pretty-terminal, process, random - , text, time, transformers + , edit-distance, filepath, graphviz, haskell-src-exts, hmatrix + , megaparsec, MonadRandom, mtl, multiset, pretty-terminal, process + , random, template-haskell, text, time, transformers }: mkDerivation { pname = "boltzmann-brain"; - version = "1.4"; - sha256 = "17xny78fkqm344cddkklv4sj8c7dnps8bn1n21xa392l2zyf7mqz"; + version = "1.6"; + sha256 = "1k6zsj4wijvxbbf3n95b61bii3p5m257capdw382613v7wp1yh6a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson base containers edit-distance graphviz haskell-src-exts - hmatrix megaparsec MonadRandom mtl multiset pretty-terminal process - random text time transformers + aeson base bytestring containers edit-distance graphviz + haskell-src-exts hmatrix megaparsec MonadRandom mtl multiset + pretty-terminal process random template-haskell text time + transformers ]; executableHaskellDepends = [ - aeson base bytestring containers directory megaparsec text + aeson base bytestring containers directory filepath megaparsec text ]; - description = "Boltzmann sampler compiler for combinatorial systems"; + description = "Analytic sampler compiler for combinatorial systems"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -42028,10 +42030,8 @@ self: { }: mkDerivation { pname = "boolean-normal-forms"; - version = "0.0.1"; - sha256 = "12i0jarbv7gq2p8zw0jgh2gq3wqk6s0vsc9rd0g7c36srcmr944b"; - revision = "1"; - editedCabalFile = "1p31kqxp77xdhkszppmnzqgxp883vasrh5910qfif50lch39myfm"; + version = "0.0.1.1"; + sha256 = "0zsll476c7g5syfz54kwcb4d2chh9q6gh0f42847n3ja1d64gaar"; libraryHaskellDepends = [ base cond containers deepseq ]; testHaskellDepends = [ base cond containers QuickCheck tasty tasty-quickcheck @@ -42344,6 +42344,25 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "boring_0_1_3" = callPackage + ({ mkDerivation, adjunctions, base, base-compat, bin, constraints + , dec, fin, generics-sop, ral, singleton-bool, streams, tagged + , transformers, transformers-compat, vec + }: + mkDerivation { + pname = "boring"; + version = "0.1.3"; + sha256 = "1fljlkzc5016xbq9jykh0wr1mbyfcikh818pp54djws5vm66hh6d"; + libraryHaskellDepends = [ + adjunctions base base-compat bin constraints dec fin generics-sop + ral singleton-bool streams tagged transformers transformers-compat + vec + ]; + description = "Boring and Absurd types"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "boring-game" = callPackage ({ mkDerivation, base, gloss }: mkDerivation { @@ -43078,6 +43097,46 @@ self: { license = stdenv.lib.licenses.agpl3; }) {}; + "brittany_0_12_1_1" = callPackage + ({ mkDerivation, aeson, base, butcher, bytestring, cmdargs + , containers, czipwith, data-tree-print, deepseq, directory, extra + , filepath, ghc, ghc-boot-th, ghc-exactprint, ghc-paths, hspec + , monad-memo, mtl, multistate, neat-interpolation, parsec, pretty + , random, safe, semigroups, strict, syb, text, transformers + , uniplate, unsafe, yaml + }: + mkDerivation { + pname = "brittany"; + version = "0.12.1.1"; + sha256 = "0nw7ymdb7xam634w42l1xjgyvpla8grcg02aj19fscw2fn9gfh7z"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base butcher bytestring cmdargs containers czipwith + data-tree-print deepseq directory extra filepath ghc ghc-boot-th + ghc-exactprint ghc-paths monad-memo mtl multistate + neat-interpolation pretty random safe semigroups strict syb text + transformers uniplate unsafe yaml + ]; + executableHaskellDepends = [ + aeson base butcher bytestring cmdargs containers czipwith + data-tree-print deepseq directory extra filepath ghc ghc-boot-th + ghc-exactprint ghc-paths monad-memo mtl multistate + neat-interpolation pretty safe semigroups strict syb text + transformers uniplate unsafe yaml + ]; + testHaskellDepends = [ + aeson base butcher bytestring cmdargs containers czipwith + data-tree-print deepseq directory extra filepath ghc ghc-boot-th + ghc-exactprint ghc-paths hspec monad-memo mtl multistate + neat-interpolation parsec pretty safe semigroups strict syb text + transformers uniplate unsafe yaml + ]; + description = "Haskell source code formatter"; + license = stdenv.lib.licenses.agpl3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "broadcast-chan" = callPackage ({ mkDerivation, async, base, criterion, deepseq, stm, transformers , unliftio-core @@ -43665,8 +43724,8 @@ self: { }: mkDerivation { pname = "buffet"; - version = "0.2.0"; - sha256 = "1zmsgsxdl7mr6h9m7g9n7qb2w86s6xr379psr947fba4vkydzi0n"; + version = "0.3.0"; + sha256 = "1dsnbx148yrqikqx9qfxivz52szlqaah7q6dg80m87g997x428m7"; isLibrary = false; isExecutable = true; libraryHaskellDepends = [ @@ -45395,8 +45454,8 @@ self: { }: mkDerivation { pname = "cabal-cache"; - version = "1.0.1.2"; - sha256 = "10njmjlg20rcn223581q013cdmmr2q5x1w62wz7gjq32n6l9fv4r"; + version = "1.0.1.3"; + sha256 = "03x5p2yz6vdrhl8dnmgc7phbsmrg7x51syg41i2hjcw9bm2js8wg"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -45621,8 +45680,8 @@ self: { }: mkDerivation { pname = "cabal-fmt"; - version = "0.1.1"; - sha256 = "07hx1s7l5zmh7vs2zmmm56msz2m7wnzn919mvnpypvrsswmmnnd9"; + version = "0.1.2"; + sha256 = "0h4qxbwykddbdbiw5j140v8cin5h4aqi260wd9fddpxdpkpmdrda"; isLibrary = false; isExecutable = true; libraryHaskellDepends = [ @@ -45852,8 +45911,8 @@ self: { }: mkDerivation { pname = "cabal-install-parsers"; - version = "0.1"; - sha256 = "0jklbv5c6nsbdj52a42ywr6nl7xqr2hgzc8l8g6aalb8nr117b45"; + version = "0.2"; + sha256 = "14bfiw8ddfm323a8870wazdb6rlyq52ykrhhm24vd2lxg61sn4aa"; libraryHaskellDepends = [ aeson base base16-bytestring binary binary-instances bytestring Cabal containers cryptohash-sha256 directory filepath lukko @@ -46056,6 +46115,28 @@ self: { broken = true; }) {}; + "cabal-rpm_1_0_2" = callPackage + ({ mkDerivation, base, bytestring, Cabal, directory, filepath + , http-client, http-client-tls, http-conduit, optparse-applicative + , process, simple-cabal, simple-cmd, simple-cmd-args, time, unix + }: + mkDerivation { + pname = "cabal-rpm"; + version = "1.0.2"; + sha256 = "03315wka46mqz090cijz1rk69i861nm6yc0jm6xjlgrbhi4ngmri"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ + base bytestring Cabal directory filepath http-client + http-client-tls http-conduit optparse-applicative process + simple-cabal simple-cmd simple-cmd-args time unix + ]; + description = "RPM packaging tool for Haskell Cabal-based packages"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "cabal-scripts" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -46567,8 +46648,8 @@ self: { }: mkDerivation { pname = "cache"; - version = "0.1.1.2"; - sha256 = "0b0jggcbnrs0pppn60kaggxkwmg0ri7b1i4j5613abgw8bj258s8"; + version = "0.1.2.0"; + sha256 = "12mxziwz8qn26v5xkp0bh13jqf9hd8pi9flm68nz82p15vhcs01s"; libraryHaskellDepends = [ base clock hashable stm transformers unordered-containers ]; @@ -46577,6 +46658,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "cache_0_1_3_0" = callPackage + ({ mkDerivation, base, clock, hashable, hspec, stm, transformers + , unordered-containers + }: + mkDerivation { + pname = "cache"; + version = "0.1.3.0"; + sha256 = "0d75257kvjpnv95ja50x5cs77pj8ccfr0nh9q5gzvcps83qdksa2"; + libraryHaskellDepends = [ + base clock hashable stm transformers unordered-containers + ]; + testHaskellDepends = [ base clock hspec stm transformers ]; + description = "An in-memory key/value store with expiration support"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "cached" = callPackage ({ mkDerivation, base, containers, directory, doctest, filepath , protolude, QuickCheck, quickcheck-assertions, shake, text @@ -48466,6 +48564,8 @@ self: { pname = "castagnoli"; version = "0.1.0.0"; sha256 = "10mznwl00lmx5zmha7w0p7yx406k0qvv74x6lcms4ynq4z5hi8fj"; + revision = "1"; + editedCabalFile = "1yp0c8klbf81m2v7qwj22l2yh0w6q6xgnk44zwxdkgpbsjghdp14"; libraryHaskellDepends = [ base byteslice primitive primitive-slice primitive-unlifted ]; @@ -51981,21 +52081,6 @@ self: { ({ mkDerivation, base, hspec, hspec-discover, mtl, text }: mkDerivation { pname = "clay"; - version = "0.13.2"; - sha256 = "1jxwq159hcc55ijga18zdlqr3ga1flilymq96hqpizb4khpq7y6j"; - libraryHaskellDepends = [ base mtl text ]; - testHaskellDepends = [ base hspec hspec-discover mtl text ]; - testToolDepends = [ hspec-discover ]; - description = "CSS preprocessor as embedded Haskell"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; - }) {}; - - "clay_0_13_3" = callPackage - ({ mkDerivation, base, hspec, hspec-discover, mtl, text }: - mkDerivation { - pname = "clay"; version = "0.13.3"; sha256 = "192lsbyj6azjs2ygpx4i47fyr8zfmvwcas8mia07ndqglk2c9csx"; libraryHaskellDepends = [ base mtl text ]; @@ -52003,8 +52088,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "CSS preprocessor as embedded Haskell"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; }) {}; "clckwrks" = callPackage @@ -52021,8 +52104,8 @@ self: { }: mkDerivation { pname = "clckwrks"; - version = "0.25.2"; - sha256 = "087k0n6ri0pg5wmjnw3gkjaz5d627519vby9kmiagck7id7f89q9"; + version = "0.25.4"; + sha256 = "0mlrkyhs095b8bwsk4mjq4wys6ydn4m9nds37lxqnw6qzl6rk5hl"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ @@ -52050,8 +52133,8 @@ self: { }: mkDerivation { pname = "clckwrks-cli"; - version = "0.3.0"; - sha256 = "0ardhl27n3al945s88dmygnw42ki5sn23s59rkhbs4pdyp9yawhs"; + version = "0.3.0.1"; + sha256 = "0f44ndvnkivwc72lxfr779kyn20g7f4wy3prqazdhk47xvl1fps6"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -52178,8 +52261,8 @@ self: { }: mkDerivation { pname = "clckwrks-plugin-media"; - version = "0.6.16.6"; - sha256 = "05gmr0y5ygsybmdp1k2xcfhbn7wix9mrwvwsv4x0has9l8xc92q1"; + version = "0.6.16.8"; + sha256 = "0l6rb5gjag9mxcn067yp3h0bd37jg18p3sg79gkf2pzkxyzhgwqk"; enableSeparateDataOutput = true; libraryHaskellDepends = [ acid-state attoparsec base blaze-html cereal clckwrks containers @@ -52205,8 +52288,8 @@ self: { }: mkDerivation { pname = "clckwrks-plugin-page"; - version = "0.4.3.18"; - sha256 = "0fgz0rxzkbavzqci4kcav1pljkhdy1mgmf3mldbxp8f88pr5lm42"; + version = "0.4.3.19"; + sha256 = "06lvr3sq5slcfc1r3vmip9flh5dn50mz6ar7x11zk4dm365g4vhk"; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ acid-state aeson attoparsec base clckwrks containers directory @@ -52229,14 +52312,13 @@ self: { }: mkDerivation { pname = "clckwrks-theme-bootstrap"; - version = "0.4.2.1"; - sha256 = "1mkqi3qx6k86d2xr4cyxg0ym5c71ip4ijgg6mg20gf3jkjjzvha4"; + version = "0.4.2.2"; + sha256 = "0sa3k34m1kf6r7i42rfg5v3g1m9drisfnn2bvlfcbyk8sna7mf80"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base clckwrks happstack-authenticate hsp hsx-jmacro hsx2hs jmacro mtl text web-plugins ]; - libraryToolDepends = [ hsx2hs ]; description = "simple bootstrap based template for clckwrks"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -53695,8 +53777,8 @@ self: { }: mkDerivation { pname = "cobot-io"; - version = "0.1.2.1"; - sha256 = "17rl3xbap3fgn2bg0iykysxaff1rakr8fq759hl7pmx3qnr8xz12"; + version = "0.1.2.3"; + sha256 = "0z4im9z5yi18kdw99d50zbcala619hba3iwka7ny5krladnz75ha"; libraryHaskellDepends = [ array attoparsec base binary bytestring containers data-msgpack deepseq http-conduit hyraxAbif lens linear mtl split text vector @@ -53715,12 +53797,12 @@ self: { "cobot-tools" = callPackage ({ mkDerivation, array, base, bytestring, cobot, containers , data-default, data-msgpack, deepseq, hspec, lens, mtl - , neat-interpolation, QuickCheck, regex-tdfa, RNA, text + , neat-interpolation, QuickCheck, random, regex-tdfa, RNA, text }: mkDerivation { pname = "cobot-tools"; - version = "0.1.1.0"; - sha256 = "0i717g632jvnah8cibgia6r12mmyiqwfgryiam71pvbaz2508rhr"; + version = "0.1.2.1"; + sha256 = "0qd3w9y3fps7kkpkvdh3wd54mm9z6ikr16f9f8jvn2gza0xc4l0m"; libraryHaskellDepends = [ array base bytestring cobot containers data-default data-msgpack deepseq lens mtl regex-tdfa text @@ -53728,8 +53810,8 @@ self: { librarySystemDepends = [ RNA ]; testHaskellDepends = [ array base bytestring cobot containers data-default data-msgpack - deepseq hspec lens mtl neat-interpolation QuickCheck regex-tdfa - text + deepseq hspec lens mtl neat-interpolation QuickCheck random + regex-tdfa text ]; description = "Biological data file formats and IO"; license = stdenv.lib.licenses.bsd3; @@ -55126,24 +55208,6 @@ self: { }: mkDerivation { pname = "comonad"; - version = "5.0.5"; - sha256 = "1l7snp2mszgnjgd0nc9kzfyd13vla0rlazqi03rwx2akcxk14n3c"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; - libraryHaskellDepends = [ - base containers distributive tagged transformers - transformers-compat - ]; - testHaskellDepends = [ base doctest ]; - description = "Comonads"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "comonad_5_0_6" = callPackage - ({ mkDerivation, base, Cabal, cabal-doctest, containers - , distributive, doctest, tagged, transformers, transformers-compat - }: - mkDerivation { - pname = "comonad"; version = "5.0.6"; sha256 = "1blgp2nm9cvnsdi2bmkmly5m0gz91npjvf1i5j4pnx6imhbb1kvp"; setupHaskellDepends = [ base Cabal cabal-doctest ]; @@ -55154,7 +55218,6 @@ self: { testHaskellDepends = [ base doctest ]; description = "Comonads"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "comonad-extras" = callPackage @@ -57910,8 +57973,8 @@ self: { }: mkDerivation { pname = "connections"; - version = "0.0.2"; - sha256 = "06z83z172c0p0k8wycjfr26dd9nq2dgg6pjp1v8m3iy4dpmar7fq"; + version = "0.0.2.1"; + sha256 = "0pjvxy0167gl6yki2cvjlynzw7biifng82ybnxjmp1b4w7il2qdm"; libraryHaskellDepends = [ base containers property semigroupoids ]; testHaskellDepends = [ base hedgehog property ]; description = "Partial orders & Galois connections"; @@ -60780,19 +60843,17 @@ self: { }) {}; "crf-chain1" = callPackage - ({ mkDerivation, array, base, binary, containers, data-lens + ({ mkDerivation, array, base, binary, containers, data-lens-light , logfloat, monad-codec, parallel, random, sgd, vector - , vector-binary, vector-th-unbox + , vector-binary-instances, vector-th-unbox }: mkDerivation { pname = "crf-chain1"; - version = "0.2.2"; - sha256 = "0v0mmpvn9qma3xz92s13ywk9p5czxzshh2rf06hb2zqqq5m6iwhq"; - revision = "1"; - editedCabalFile = "16h297h22wfkq8sgvfxm4gv7wi7pz7pl481b6lgk04rw23bgd2x2"; + version = "0.2.3"; + sha256 = "0k805zqjqixicf4s0gs04jc1gijckcnrb3w43sykhhsbz194p0s2"; libraryHaskellDepends = [ - array base binary containers data-lens logfloat monad-codec - parallel random sgd vector vector-binary vector-th-unbox + array base binary containers data-lens-light logfloat monad-codec + parallel random sgd vector vector-binary-instances vector-th-unbox ]; description = "First-order, linear-chain conditional random fields"; license = stdenv.lib.licenses.bsd3; @@ -61346,6 +61407,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "crypto-keys-ssh" = callPackage + ({ mkDerivation, base, base64-bytestring, binary, bytestring }: + mkDerivation { + pname = "crypto-keys-ssh"; + version = "0.1.0.0"; + sha256 = "17r15w7rw6klcw5nlq6acka7rq3kba3vikwggb2fssr8x7wfrm5r"; + libraryHaskellDepends = [ + base base64-bytestring binary bytestring + ]; + description = "Like crypto-pubkey-openssh but not dependent on any specific crypto library"; + license = stdenv.lib.licenses.mit; + }) {}; + "crypto-multihash" = callPackage ({ mkDerivation, base, base58-bytestring, bytestring, containers , cryptonite, hspec, memory, QuickCheck, string-conversions @@ -63174,7 +63248,7 @@ self: { description = "A raw binding for the directX 11"; license = stdenv.lib.licenses.mit; platforms = stdenv.lib.platforms.none; - }) {D3DCompiler = null; d3d11 = null; d3dx11 = null; + }) {D3DCompiler = null; d3d11 = null; d3dx11 = null; d3dxof = null; dxgi = null; dxguid = null;}; "d3js" = callPackage @@ -63483,7 +63557,7 @@ self: { license = "GPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) curl; inherit (pkgs) ncurses; + }) {inherit (pkgs) curl; inherit (pkgs) ncurses; inherit (pkgs) zlib;}; "darcs-fastconvert" = callPackage @@ -64955,8 +65029,8 @@ self: { ({ mkDerivation, attoparsec, base, binary, containers, text }: mkDerivation { pname = "data-named"; - version = "0.6.1"; - sha256 = "14xhjp13hq2d9raybw50v85pax54xb1niczd6f32gvn8cdd28pji"; + version = "0.6.2"; + sha256 = "03f4xc4ayql17s48ajza2ny79j885mcmp0x3mrwcfdc42dlnd7nb"; libraryHaskellDepends = [ attoparsec base binary containers text ]; description = "Data types for named entities"; license = stdenv.lib.licenses.bsd3; @@ -68210,29 +68284,6 @@ self: { }: mkDerivation { pname = "deriving-compat"; - version = "0.5.7"; - sha256 = "0bp4f0is84cv139s35669dv23mcp6lhp2wall72yvkk12lp2l2mg"; - libraryHaskellDepends = [ - base containers ghc-boot-th ghc-prim template-haskell - th-abstraction transformers transformers-compat - ]; - testHaskellDepends = [ - base base-compat base-orphans hspec QuickCheck tagged - template-haskell transformers transformers-compat - ]; - testToolDepends = [ hspec-discover ]; - description = "Backports of GHC deriving extensions"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "deriving-compat_0_5_8" = callPackage - ({ mkDerivation, base, base-compat, base-orphans, containers - , ghc-boot-th, ghc-prim, hspec, hspec-discover, QuickCheck, tagged - , template-haskell, th-abstraction, transformers - , transformers-compat - }: - mkDerivation { - pname = "deriving-compat"; version = "0.5.8"; sha256 = "1dznwypw0w935z30zi9pf9k4mr5yfl6jfp43nv9vx3f6zy5gip9r"; libraryHaskellDepends = [ @@ -68246,7 +68297,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "Backports of GHC deriving extensions"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "derp" = callPackage @@ -68691,37 +68741,37 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall_1_27_0" = callPackage - ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, base - , bytestring, case-insensitive, cborg, cborg-json, containers + "dhall_1_28_0" = callPackage + ({ mkDerivation, aeson, aeson-pretty, ansi-terminal, atomic-write + , base, bytestring, case-insensitive, cborg, cborg-json, containers , contravariant, cryptonite, data-fix, deepseq, Diff, directory , doctest, dotgen, either, exceptions, filepath, foldl, gauge , generic-random, hashable, haskeline, http-client, http-client-tls , http-types, lens-family-core, megaparsec, memory, mockery, mtl - , network-uri, optparse-applicative, parsers, prettyprinter - , prettyprinter-ansi-terminal, profunctors, QuickCheck - , quickcheck-instances, repline, scientific, semigroups, serialise - , special-values, spoon, tasty, tasty-expected-failure, tasty-hunit - , tasty-quickcheck, template-haskell, text, th-lift-instances - , transformers, transformers-compat, turtle, unordered-containers - , uri-encode, vector + , network-uri, optparse-applicative, parsers, pretty-simple + , prettyprinter, prettyprinter-ansi-terminal, profunctors + , QuickCheck, quickcheck-instances, repline, scientific, semigroups + , serialise, special-values, spoon, tasty, tasty-expected-failure + , tasty-hunit, tasty-quickcheck, template-haskell, text + , th-lift-instances, transformers, transformers-compat, turtle + , unordered-containers, uri-encode, vector }: mkDerivation { pname = "dhall"; - version = "1.27.0"; - sha256 = "04hpf0g8anhynrc3gd96cg1z4qadrk2xg9094qjm68d2kv6zx2g1"; + version = "1.28.0"; + sha256 = "0kiw8a9im768j304s80pv90vp1hh38v7fxfh2bb4hmglh3a8kc21"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson aeson-pretty ansi-terminal base bytestring case-insensitive - cborg cborg-json containers contravariant cryptonite data-fix - deepseq Diff directory dotgen either exceptions filepath hashable - haskeline http-client http-client-tls http-types lens-family-core - megaparsec memory mtl network-uri optparse-applicative parsers - prettyprinter prettyprinter-ansi-terminal profunctors repline - scientific serialise template-haskell text th-lift-instances - transformers transformers-compat unordered-containers uri-encode - vector + aeson aeson-pretty ansi-terminal atomic-write base bytestring + case-insensitive cborg cborg-json containers contravariant + cryptonite data-fix deepseq Diff directory dotgen either exceptions + filepath hashable haskeline http-client http-client-tls http-types + lens-family-core megaparsec memory mtl network-uri + optparse-applicative parsers pretty-simple prettyprinter + prettyprinter-ansi-terminal profunctors repline scientific + serialise template-haskell text th-lift-instances transformers + transformers-compat unordered-containers uri-encode vector ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ @@ -68761,14 +68811,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall-bash_1_0_24" = callPackage + "dhall-bash_1_0_25" = callPackage ({ mkDerivation, base, bytestring, containers, dhall , neat-interpolation, optparse-generic, shell-escape, text }: mkDerivation { pname = "dhall-bash"; - version = "1.0.24"; - sha256 = "0llc8232qrlrhzdww5a1blqdsxpf3ra9hcdjwgahcfxsk1gh4z9g"; + version = "1.0.25"; + sha256 = "0bxfx2hj06q1w1372zc7cfibsqw2hckz5116zz447mz5zmcfkjv3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -68805,26 +68855,29 @@ self: { "dhall-fly" = callPackage ({ mkDerivation, aeson, aeson-casing, aeson-yaml, base, bytestring , dhall, dhall-json, hspec, hspec-discover, optparse-applicative - , scientific, text, transformers, unordered-containers, vector + , ordered-containers, scientific, text, transformers + , unordered-containers, vector }: mkDerivation { pname = "dhall-fly"; - version = "0.2.0"; - sha256 = "0h684icyp6r5cmr5cddgwbi2ci5ihkra0lyhgnisgrsvn8qmzz5d"; + version = "0.2.2"; + sha256 = "1pp5lzg8nv1j0y9mrjb4zd9immd7i14ri0x2rgp7zjs86ygcmlf7"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson aeson-casing base dhall optparse-applicative scientific text - transformers unordered-containers vector + aeson aeson-casing base dhall optparse-applicative + ordered-containers scientific text transformers + unordered-containers vector ]; executableHaskellDepends = [ aeson aeson-casing aeson-yaml base bytestring dhall dhall-json - optparse-applicative scientific text transformers - unordered-containers vector + optparse-applicative ordered-containers scientific text + transformers unordered-containers vector ]; testHaskellDepends = [ - aeson aeson-casing base dhall hspec optparse-applicative scientific - text transformers unordered-containers vector + aeson aeson-casing base dhall hspec optparse-applicative + ordered-containers scientific text transformers + unordered-containers vector ]; testToolDepends = [ hspec-discover ]; description = "Translate concourse config from Dhall to YAML"; @@ -68863,7 +68916,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "dhall-json_1_5_0" = callPackage + "dhall-json_1_6_0" = callPackage ({ mkDerivation, aeson, aeson-pretty, aeson-yaml, ansi-terminal , base, bytestring, containers, dhall, exceptions, filepath , optparse-applicative, prettyprinter, prettyprinter-ansi-terminal @@ -68872,8 +68925,8 @@ self: { }: mkDerivation { pname = "dhall-json"; - version = "1.5.0"; - sha256 = "1xr2p1k4bx6djbq5z8bd77vv0w77vfb0xgbsz3b9g03g6w4zifsd"; + version = "1.6.0"; + sha256 = "1fb3w7p2blnxqc6q3q620vpr0fpqs2my7hh33ykh7jpzs7p031h5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -68917,15 +68970,13 @@ self: { , data-default, dhall, dhall-json, directory, doctest, filepath , haskell-lsp, haskell-lsp-types, hslogger, lens, lens-family-core , lsp-test, megaparsec, mtl, network-uri, optparse-applicative - , prettyprinter, rope-utf16-splay, tasty, tasty-hspec, text - , transformers, unordered-containers, uri-encode + , prettyprinter, QuickCheck, rope-utf16-splay, tasty, tasty-hspec + , text, transformers, unordered-containers, uri-encode }: mkDerivation { pname = "dhall-lsp-server"; - version = "1.0.2"; - sha256 = "1q5kncgy4cdys27j43jfwsnjcg8nr1w4i0ip910c6w56x1p7vnnv"; - revision = "1"; - editedCabalFile = "18j3fiskp6i4kccbhp3zc0dfvxnq29gyq3yq9vylq9gx0kh98jyd"; + version = "1.0.3"; + sha256 = "1ym7v3blgj4ccchg6cpyxpllp6xz6fh8kfyy3i0b1kd5lzm90s0n"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -68936,8 +68987,8 @@ self: { ]; executableHaskellDepends = [ base optparse-applicative ]; testHaskellDepends = [ - base directory doctest filepath haskell-lsp-types lsp-test tasty - tasty-hspec text + base directory doctest filepath haskell-lsp-types lsp-test + QuickCheck tasty tasty-hspec text ]; description = "Language Server Protocol (LSP) server for Dhall"; license = stdenv.lib.licenses.mit; @@ -68951,8 +69002,8 @@ self: { }: mkDerivation { pname = "dhall-nix"; - version = "1.1.9"; - sha256 = "153r0h4qdfnw7bw4hfbh1imx5hrxh419qny3zj3d0bmsidf8gakr"; + version = "1.1.10"; + sha256 = "04fb8l9qh70fqa50ck0hz8134s1bmcyscbf5xg5ylnxpdrs3n7as"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -69014,6 +69065,36 @@ self: { broken = true; }) {}; + "dhall-yaml" = callPackage + ({ mkDerivation, aeson, ansi-terminal, base, bytestring, dhall + , dhall-json, exceptions, HsYAML, HsYAML-aeson + , optparse-applicative, prettyprinter, prettyprinter-ansi-terminal + , tasty, tasty-expected-failure, tasty-hunit, text, vector + }: + mkDerivation { + pname = "dhall-yaml"; + version = "1.0.0"; + sha256 = "05jhcvikm3rbcf9jzw747x70c3dsslcij977yhqks0c59nr9pqn6"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + aeson base bytestring dhall dhall-json HsYAML HsYAML-aeson + optparse-applicative text vector + ]; + executableHaskellDepends = [ + aeson ansi-terminal base bytestring dhall dhall-json exceptions + optparse-applicative prettyprinter prettyprinter-ansi-terminal text + ]; + testHaskellDepends = [ + base bytestring dhall dhall-json tasty tasty-expected-failure + tasty-hunit text + ]; + description = "Convert between Dhall and YAML"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "dhcp-lease-parser" = callPackage ({ mkDerivation, attoparsec, base, bytestring, chronos, ip, tasty , tasty-hunit, text @@ -69542,8 +69623,8 @@ self: { }: mkDerivation { pname = "diagrams-pgf"; - version = "1.4.1"; - sha256 = "00nw2zraanwb20wl9iaynw0kffwshgmy94yn50pgj3vlykj399lr"; + version = "1.4.1.1"; + sha256 = "10glg5pqy8zw6l77wnskcawl8da0c10sqfg9dx2jydksd3xpns2f"; libraryHaskellDepends = [ base bytestring bytestring-builder colour containers diagrams-core diagrams-lib directory filepath hashable JuicyPixels mtl @@ -69572,6 +69653,25 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "diagrams-postscript_1_5" = callPackage + ({ mkDerivation, base, bytestring, containers, data-default-class + , diagrams-core, diagrams-lib, hashable, lens, monoid-extras, mtl + , semigroups, split, statestack + }: + mkDerivation { + pname = "diagrams-postscript"; + version = "1.5"; + sha256 = "00j58mc84srjvrf21v6zjxxlbw6b8ahhn1jmbq697w8kw3cvygpa"; + libraryHaskellDepends = [ + base bytestring containers data-default-class diagrams-core + diagrams-lib hashable lens monoid-extras mtl semigroups split + statestack + ]; + description = "Postscript backend for diagrams drawing EDSL"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "diagrams-qrcode" = callPackage ({ mkDerivation, array, base, colour, diagrams-core, diagrams-lib }: @@ -69609,6 +69709,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "diagrams-rasterific_1_4_2" = callPackage + ({ mkDerivation, base, bytestring, containers, data-default-class + , diagrams-core, diagrams-lib, file-embed, filepath, FontyFruity + , hashable, JuicyPixels, lens, mtl, optparse-applicative + , Rasterific + }: + mkDerivation { + pname = "diagrams-rasterific"; + version = "1.4.2"; + sha256 = "161rsy3g59n3sfrbfyvd4i4hszl0zm59w21b7pk6w88n0bk8gf2l"; + libraryHaskellDepends = [ + base bytestring containers data-default-class diagrams-core + diagrams-lib file-embed filepath FontyFruity hashable JuicyPixels + lens mtl optparse-applicative Rasterific + ]; + testHaskellDepends = [ base diagrams-core diagrams-lib ]; + description = "Rasterific backend for diagrams"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "diagrams-reflex" = callPackage ({ mkDerivation, base, colour, containers, diagrams-core , diagrams-lib, lens, monoid-extras, mtl, reflex, reflex-dom @@ -69681,6 +69802,26 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "diagrams-svg_1_4_3" = callPackage + ({ mkDerivation, base, base64-bytestring, bytestring, colour + , containers, diagrams-core, diagrams-lib, filepath, hashable + , JuicyPixels, lens, monoid-extras, mtl, optparse-applicative + , semigroups, split, svg-builder, text + }: + mkDerivation { + pname = "diagrams-svg"; + version = "1.4.3"; + sha256 = "1ysv6cz0fngrndl4wjmw4hrdj2rik5fxa1dkxzwnlgf1xwpvxgk8"; + libraryHaskellDepends = [ + base base64-bytestring bytestring colour containers diagrams-core + diagrams-lib filepath hashable JuicyPixels lens monoid-extras mtl + optparse-applicative semigroups split svg-builder text + ]; + description = "SVG backend for diagrams drawing EDSL"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "diagrams-tikz" = callPackage ({ mkDerivation, base, diagrams-core, diagrams-lib, dlist, mtl }: mkDerivation { @@ -70561,8 +70702,8 @@ self: { }: mkDerivation { pname = "dino"; - version = "0.1.1"; - sha256 = "05n0zsl9wvwilnmh28s89cda8a72qfbnhwkbbnw9yihpbamx59z9"; + version = "0.1.2"; + sha256 = "0sk7p89fmjynykk7djfn8cmmjrqyv5pml9ny2dycr1n86cnxr88x"; libraryHaskellDepends = [ ansi-wl-pprint base containers errors exceptions hashable monad-loops mtl text transformers tree-view unordered-containers @@ -72787,7 +72928,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "doctemplates_0_7_2" = callPackage + "doctemplates_0_8" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, criterion , doclayout, filepath, Glob, HsYAML, mtl, parsec, safe, scientific , tasty, tasty-golden, tasty-hunit, temporary, text @@ -72795,8 +72936,8 @@ self: { }: mkDerivation { pname = "doctemplates"; - version = "0.7.2"; - sha256 = "1sadadxq3vyzq4l3p05wvmkw68nwjprn98hn4l5zxif0r722jyxj"; + version = "0.8"; + sha256 = "0zhnhdpbh0cyh6nr655yfik135gssa1qhfhzsvaph2n1qwq1l6nn"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson base containers doclayout filepath HsYAML mtl parsec safe @@ -73492,6 +73633,22 @@ self: { broken = true; }) {}; + "downloader" = callPackage + ({ mkDerivation, base, directory, filepath, network-uri, process + , safe + }: + mkDerivation { + pname = "downloader"; + version = "0.1.0.1"; + sha256 = "1mjsdnghlbi1c0pzhrng1dcvs1syisxrv7ygg5267f9hmcwk5zgn"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base directory filepath network-uri process safe + ]; + description = "A small, low-dependency library that provides turn-key file download over HTTP and HTTPS"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "dozenal" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -75792,6 +75949,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "edit-distance-linear" = callPackage + ({ mkDerivation, array, base, bytestring, criterion, edit-distance + , hspec, QuickCheck, text, text-metrics + }: + mkDerivation { + pname = "edit-distance-linear"; + version = "0.2.0.2"; + sha256 = "0l95jjhjn39slyaixis2z6w0mly1vk1c2ia3nykhkvwp2adyn5nf"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ array base bytestring ]; + testHaskellDepends = [ + array base bytestring edit-distance hspec QuickCheck + ]; + benchmarkHaskellDepends = [ + array base bytestring criterion text text-metrics + ]; + description = "Efficient implementation of the Levenshtein edit distance in linear memory"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "edit-distance-vector" = callPackage ({ mkDerivation, base, QuickCheck, quickcheck-instances, vector }: mkDerivation { @@ -77610,6 +77788,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "emojis" = callPackage + ({ mkDerivation, base, containers, HUnit, text }: + mkDerivation { + pname = "emojis"; + version = "0.1"; + sha256 = "1c6zkj9gmk1y90gbdrn50hyp7mw1mggzhnr2khqd728ryipw60ss"; + libraryHaskellDepends = [ base containers text ]; + testHaskellDepends = [ base HUnit text ]; + description = "Conversion between emoji characters and their names"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "empty" = callPackage ({ mkDerivation }: mkDerivation { @@ -79145,7 +79335,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "esqueleto_3_2_3" = callPackage + "esqueleto_3_3_0" = callPackage ({ mkDerivation, aeson, attoparsec, base, blaze-html, bytestring , conduit, containers, exceptions, hspec, monad-logger, mtl, mysql , mysql-simple, persistent, persistent-mysql, persistent-postgresql @@ -79155,8 +79345,8 @@ self: { }: mkDerivation { pname = "esqueleto"; - version = "3.2.3"; - sha256 = "1m8ib08bnrmigpf0lzkn1wm8p479aflm92irzq5v3gg07dqgypcy"; + version = "3.3.0"; + sha256 = "0qscm9b4zqb0w78xpf1yhmjlbapvghmvsqxqwx2x0grb4yvv7cwq"; libraryHaskellDepends = [ aeson attoparsec base blaze-html bytestring conduit containers monad-logger persistent resourcet tagged text time transformers @@ -79742,15 +79932,15 @@ self: { "evdev" = callPackage ({ mkDerivation, base, bytestring, c2hs, composition, containers , either, evdev, extra, hinotify, posix-paths, process, rawfilepath - , streamly, time, unix + , safe, streamly, time, unix }: mkDerivation { pname = "evdev"; - version = "0.1.0.1"; - sha256 = "17y1rg6p8inzf3zdakfxwp4f3yrak83lqfdjiwg786x4f0ab3jaq"; + version = "0.2.0.1"; + sha256 = "0b005anc3bxs8ys5zmzzs81n4wmjabvv7fbcj5w62ddsjfq38p62"; libraryHaskellDepends = [ base bytestring composition containers either extra hinotify - posix-paths process rawfilepath streamly time unix + posix-paths process rawfilepath safe streamly time unix ]; librarySystemDepends = [ evdev ]; libraryToolDepends = [ c2hs ]; @@ -82512,10 +82702,8 @@ self: { }: mkDerivation { pname = "fastsum"; - version = "0.1.1.0"; - sha256 = "0fa3wjdsjl8wwlw194g1b7j8rvwix2b1hgwm1s10fq91a10mca6n"; - revision = "1"; - editedCabalFile = "0cjzy6q0srff2ygwrffgf4a6clpva4fd7jx5z3pv7ym64w5f4l97"; + version = "0.1.1.1"; + sha256 = "0j9jd068xgk7nn2ilgdkv1pxngflqqgxz1pnhdssgiih04v8zw5l"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -83790,7 +83978,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) ffmpeg; libavcodec = null; libavdevice = null; + }) {inherit (pkgs) ffmpeg; libavcodec = null; libavdevice = null; libavformat = null; libswscale = null;}; "ffmpeg-tutorials" = callPackage @@ -84283,6 +84471,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "filepath-bytestring" = callPackage + ({ mkDerivation, base, bytestring, filepath, QuickCheck, unix }: + mkDerivation { + pname = "filepath-bytestring"; + version = "1.4.2.1.0"; + sha256 = "1q2d02p87yfvqbqhgry6lzqkjhscqfacpcxgnc6xz9b1rvg1mwvj"; + libraryHaskellDepends = [ base bytestring unix ]; + testHaskellDepends = [ base bytestring filepath QuickCheck ]; + description = "Library for manipulating RawFilePaths in a cross platform way"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "filepath-crypto" = callPackage ({ mkDerivation, base, binary, bytestring, case-insensitive , cryptoids, cryptoids-class, cryptoids-types, exceptions, filepath @@ -84523,6 +84723,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "fin_0_1_1" = callPackage + ({ mkDerivation, base, dec, deepseq, hashable, inspection-testing + , QuickCheck, tagged + }: + mkDerivation { + pname = "fin"; + version = "0.1.1"; + sha256 = "0zwc8x2ilbk1bhsk85brf6g300cx4w2j3602gjh6rv900961gqri"; + libraryHaskellDepends = [ base dec deepseq hashable QuickCheck ]; + testHaskellDepends = [ base inspection-testing tagged ]; + description = "Nat and Fin: peano naturals and finite numbers"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "final" = callPackage ({ mkDerivation, base, stm, transformers }: mkDerivation { @@ -85543,8 +85758,8 @@ self: { }: mkDerivation { pname = "flags-applicative"; - version = "0.1.0.1"; - sha256 = "1pamcfv5g6d42ksq10af0l2a6k8y997zx3y4pvf5gcy5hlxr2gwv"; + version = "0.1.0.2"; + sha256 = "192yghdmylynn57l22ahb6dhrbl590dxmv2cdn755r22v7dbhsgf"; libraryHaskellDepends = [ base casing containers mtl network text ]; @@ -86211,7 +86426,7 @@ self: { ]; description = "FLTK bindings"; license = stdenv.lib.licenses.mit; - }) {inherit (pkgs) fltk14; inherit (pkgs) libGL; + }) {inherit (pkgs) fltk14; inherit (pkgs) libGL; inherit (pkgs) libGLU; inherit (pkgs) pkg-config;}; "fltkhs-demos" = callPackage @@ -87203,24 +87418,6 @@ self: { }: mkDerivation { pname = "forma"; - version = "1.1.2"; - sha256 = "1ppgqwqm157ygj992r0cbarfii127g7nm63wbnrqvr9k1wmnlxx0"; - libraryHaskellDepends = [ - aeson base containers mtl text unordered-containers - ]; - testHaskellDepends = [ aeson base containers hspec mtl text ]; - description = "Parse and validate forms in JSON format"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; - }) {}; - - "forma_1_1_3" = callPackage - ({ mkDerivation, aeson, base, containers, hspec, mtl, text - , unordered-containers - }: - mkDerivation { - pname = "forma"; version = "1.1.3"; sha256 = "0pd2qzibffbkw2c4mk687yg109pl0nfjq0kpwi2cl0l8d0qlyv0c"; libraryHaskellDepends = [ @@ -87716,6 +87913,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "fplll" = callPackage + ({ mkDerivation, base, fplll, hgmp, lattices, semibounded-lattices + }: + mkDerivation { + pname = "fplll"; + version = "0.1.0.0"; + sha256 = "1q9njmsgxx4cpziw2llnbpg5ic6sag7qdhial00rak3iq29rzlhh"; + libraryHaskellDepends = [ + base hgmp lattices semibounded-lattices + ]; + libraryPkgconfigDepends = [ fplll ]; + testHaskellDepends = [ base ]; + description = "Haskell bindings to <https://fplll.github.io/fplll/ fplll>"; + license = stdenv.lib.licenses.lgpl21Plus; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {inherit (pkgs) fplll;}; + "fpnla" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -87970,23 +88185,6 @@ self: { }: mkDerivation { pname = "free"; - version = "5.1.2"; - sha256 = "0vlf3f2ckl3cr7z2zl8c9c8qkdlfgvmh04gxkp2fg0z9dz80nlyb"; - libraryHaskellDepends = [ - base comonad containers distributive exceptions mtl profunctors - semigroupoids template-haskell transformers transformers-base - ]; - description = "Monads for free"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "free_5_1_3" = callPackage - ({ mkDerivation, base, comonad, containers, distributive - , exceptions, mtl, profunctors, semigroupoids, template-haskell - , transformers, transformers-base - }: - mkDerivation { - pname = "free"; version = "5.1.3"; sha256 = "0b9f9jrfgkq13333px6p1faxpcypqvzi0m9dnbj2rm8s79pdcw1c"; libraryHaskellDepends = [ @@ -87995,7 +88193,6 @@ self: { ]; description = "Monads for free"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "free-algebras" = callPackage @@ -88004,8 +88201,8 @@ self: { }: mkDerivation { pname = "free-algebras"; - version = "0.0.8.0"; - sha256 = "0hwvjvly1ab7bnb4knqxz0gpxkw8pn1x5xbqf3g0k98cqr0zpsj7"; + version = "0.0.8.1"; + sha256 = "07p1nmg88b6nvqi33q80vb2aj6svx9r33ax85ry6d7adkg83s4jz"; libraryHaskellDepends = [ base containers data-fix dlist free groups kan-extensions mtl transformers @@ -88014,7 +88211,7 @@ self: { base containers data-fix dlist free groups hedgehog kan-extensions mtl transformers ]; - description = "Free algebras in Haskell"; + description = "Free algebras"; license = stdenv.lib.licenses.mpl20; }) {}; @@ -88030,13 +88227,19 @@ self: { }) {}; "free-category" = callPackage - ({ mkDerivation, base, free-algebras }: + ({ mkDerivation, base, criterion, free-algebras, QuickCheck, tasty + , tasty-quickcheck + }: mkDerivation { pname = "free-category"; - version = "0.0.2.0"; - sha256 = "16gs7n3gl5whda376j87qm9jfdx6zhmnyp43fjfaj6s5y2s0z53z"; + version = "0.0.4.1"; + sha256 = "1d7r9mcq4163g665bgzwxhvrk2iiypgss8s3j2lmqccb461s7a4j"; libraryHaskellDepends = [ base free-algebras ]; - description = "Free category"; + testHaskellDepends = [ + base free-algebras QuickCheck tasty tasty-quickcheck + ]; + benchmarkHaskellDepends = [ base criterion ]; + description = "efficient data types for free categories and arrows"; license = stdenv.lib.licenses.mpl20; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -88367,7 +88570,7 @@ self: { description = "Interface to the Kinect device"; license = stdenv.lib.licenses.bsd3; platforms = [ "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) freenect; freenect_sync = null; + }) {inherit (pkgs) freenect; freenect_sync = null; libfreenect = null;}; "freer" = callPackage @@ -90919,9 +91122,9 @@ self: { ]; description = "A Haskell binding to a subset of the GD graphics library"; license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs) expat; inherit (pkgs) fontconfig; - inherit (pkgs) freetype; inherit (pkgs) gd; - inherit (pkgs) libjpeg; inherit (pkgs) libpng; + }) {inherit (pkgs) expat; inherit (pkgs) fontconfig; + inherit (pkgs) freetype; inherit (pkgs) gd; + inherit (pkgs) libjpeg; inherit (pkgs) libpng; inherit (pkgs) zlib;}; "gdax" = callPackage @@ -92247,12 +92450,12 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "genvalidity_0_9_0_1" = callPackage + "genvalidity_0_9_1_0" = callPackage ({ mkDerivation, base, hspec, hspec-core, QuickCheck, validity }: mkDerivation { pname = "genvalidity"; - version = "0.9.0.1"; - sha256 = "1f0jhahgh0kyyk74g2vmjb3vcv4qvg2xhib1n92r8yyggxih3msl"; + version = "0.9.1.0"; + sha256 = "0pkc0ys8g6g0d22s83xwk1vkx476qhassdqn4d7m6z0zcsq0shkg"; libraryHaskellDepends = [ base QuickCheck validity ]; testHaskellDepends = [ base hspec hspec-core QuickCheck ]; description = "Testing utilities for the validity library"; @@ -92320,15 +92523,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "genvalidity-containers_0_8_0_0" = callPackage + "genvalidity-containers_0_8_0_1" = callPackage ({ mkDerivation, base, containers, genvalidity, genvalidity-hspec , genvalidity-property, hspec, QuickCheck, validity , validity-containers }: mkDerivation { pname = "genvalidity-containers"; - version = "0.8.0.0"; - sha256 = "1397i50dzd7jhq2ymzs2msgbgkih9dfn74bhl2va2rrgjhnypnw6"; + version = "0.8.0.1"; + sha256 = "1iamvqrrvqa07hkpfcsmmrg3zppm2gk5gn97qpgmwn0h1pq9fmjp"; libraryHaskellDepends = [ base containers genvalidity QuickCheck validity validity-containers ]; @@ -92616,6 +92819,31 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "genvalidity-text_0_7_0_1" = callPackage + ({ mkDerivation, array, base, criterion, genvalidity + , genvalidity-criterion, genvalidity-hspec, hspec, QuickCheck + , random, text, validity, validity-text + }: + mkDerivation { + pname = "genvalidity-text"; + version = "0.7.0.1"; + sha256 = "13lpvjid379acapk8if3355zrgaaw2dg8fw52vzby9hqj4ki4gxs"; + libraryHaskellDepends = [ + array base genvalidity QuickCheck random text validity + validity-text + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec QuickCheck text + ]; + benchmarkHaskellDepends = [ + base criterion genvalidity genvalidity-criterion QuickCheck text + ]; + description = "GenValidity support for Text"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {genvalidity-criterion = null;}; + "genvalidity-time" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, time, validity-time @@ -93312,8 +93540,8 @@ self: { }: mkDerivation { pname = "ghc-events"; - version = "0.11.0"; - sha256 = "0ssm19fp6phpj7b0xgylz29fcbzq8chgfz62kax3wc1acd40vmp0"; + version = "0.12.0"; + sha256 = "08lrpi6dn32m9ih2w6s7s7fq95k5k015jxkj73z1kss092l3pwi6"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -93577,27 +93805,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "ghc-lib_8_8_1" = callPackage + "ghc-lib_8_8_1_20191204" = callPackage ({ mkDerivation, alex, array, base, binary, bytestring, containers , deepseq, directory, filepath, ghc-lib-parser, ghc-prim, happy - , haskeline, hpc, pretty, process, time, transformers, unix + , hpc, pretty, process, time, transformers, unix }: mkDerivation { pname = "ghc-lib"; - version = "8.8.1"; - sha256 = "0lilr12pamss6x2vkqb700zy7yd15vd4y8f0h4q8fdp068bxn177"; - isLibrary = true; - isExecutable = true; + version = "8.8.1.20191204"; + sha256 = "1xj2l9w4jmwxavs5s6p50wciracqlvkx9mg015m8gv1s8sxn6sqh"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array base binary bytestring containers deepseq directory filepath ghc-lib-parser ghc-prim hpc pretty process time transformers unix ]; libraryToolDepends = [ alex happy ]; - executableHaskellDepends = [ - array base bytestring containers deepseq directory filepath - ghc-prim haskeline process time transformers unix - ]; description = "The GHC API, decoupled from GHC versions"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -93622,15 +93844,15 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "ghc-lib-parser_8_8_1" = callPackage + "ghc-lib-parser_8_8_1_20191204" = callPackage ({ mkDerivation, alex, array, base, binary, bytestring, containers , deepseq, directory, filepath, ghc-prim, happy, hpc, pretty , process, time, transformers, unix }: mkDerivation { pname = "ghc-lib-parser"; - version = "8.8.1"; - sha256 = "12aicsvc45ld2hv2qq0wdky4qa2mg8s6hhamilavcbp0da2s6wnh"; + version = "8.8.1.20191204"; + sha256 = "0acfq70mhhb76v0fhgqnijb4yp4njzxwc3c6d53r594cix3grvdp"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array base binary bytestring containers deepseq directory filepath @@ -94063,6 +94285,8 @@ self: { pname = "ghc-syntax-highlighter"; version = "0.0.5.0"; sha256 = "09h911wqja56b9j9dwjqv7dlim9rm50vra1bkp8zhnlw9fa2s127"; + revision = "1"; + editedCabalFile = "15ykgzk8f1kslvwl645saz7q1d6iv3fk5xyri65v2gaiaih0r640"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base ghc-lib-parser text ]; testHaskellDepends = [ base hspec text ]; @@ -94465,8 +94689,8 @@ self: { }: mkDerivation { pname = "ghcid"; - version = "0.7.6"; - sha256 = "0ic4v2l2mlcbgshd2p3834mdzagprc2bqjhnm9z38yvwj4bjgp5r"; + version = "0.7.7"; + sha256 = "1qrj6is1f6jnx9m2g7cp2009dik7inzf5yqlvqv4pwzzxp0nhl3a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -94484,15 +94708,15 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "ghcid_0_7_7" = callPackage + "ghcid_0_8" = callPackage ({ mkDerivation, ansi-terminal, base, cmdargs, containers , directory, extra, filepath, fsnotify, process, tasty, tasty-hunit , terminal-size, time, unix }: mkDerivation { pname = "ghcid"; - version = "0.7.7"; - sha256 = "1qrj6is1f6jnx9m2g7cp2009dik7inzf5yqlvqv4pwzzxp0nhl3a"; + version = "0.8"; + sha256 = "1vyjsxxp0jqqfkxp9r8by9qg794g0nj3k5zg7vlvh5v8xzigv8qg"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -94514,18 +94738,18 @@ self: { "ghcide" = callPackage ({ mkDerivation, aeson, async, base, binary, bytestring, containers , data-default, deepseq, directory, extra, filepath, ghc, ghc-boot - , ghc-boot-th, ghc-paths, hashable, haskell-lsp, haskell-lsp-types - , hie-bios, hslogger, lens, lsp-test, mtl, network-uri - , optparse-applicative, parser-combinators, prettyprinter - , prettyprinter-ansi-terminal, rope-utf16-splay, safe-exceptions - , shake, sorted-list, stm, syb, tasty, tasty-expected-failure - , tasty-hunit, text, time, transformers, unix, unordered-containers - , utf8-string + , ghc-boot-th, ghc-paths, ghc-typelits-knownnat, hashable + , haskell-lsp, haskell-lsp-types, hie-bios, hslogger, lens + , lsp-test, mtl, network-uri, optparse-applicative + , parser-combinators, prettyprinter, prettyprinter-ansi-terminal + , rope-utf16-splay, safe-exceptions, shake, sorted-list, stm, syb + , tasty, tasty-expected-failure, tasty-hunit, text, time + , transformers, unix, unordered-containers, utf8-string }: mkDerivation { pname = "ghcide"; - version = "0.0.4"; - sha256 = "19iasnsqz9a07gw1f3cxraij1hykwxsidx1c26ws8l13nhnh6mpr"; + version = "0.0.5"; + sha256 = "014l2gg7ln2q9c7qpga45iicxi5mcyjzllvyiwb4vd8rmbkvr1bm"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -94541,14 +94765,12 @@ self: { haskell-lsp hie-bios hslogger optparse-applicative shake text ]; testHaskellDepends = [ - base containers directory extra filepath ghc haskell-lsp-types lens - lsp-test parser-combinators tasty tasty-expected-failure - tasty-hunit text + base bytestring containers directory extra filepath ghc + ghc-typelits-knownnat haskell-lsp-types lens lsp-test + parser-combinators tasty tasty-expected-failure tasty-hunit text ]; description = "The core of an IDE"; license = stdenv.lib.licenses.asl20; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; }) {}; "ghcjs-ajax" = callPackage @@ -96222,9 +96444,9 @@ self: { description = "manage files with git, without checking their contents into git"; license = stdenv.lib.licenses.agpl3; maintainers = with stdenv.lib.maintainers; [ peti ]; - }) {inherit (pkgs) bup; inherit (pkgs) curl; inherit (pkgs) git; - inherit (pkgs) gnupg; inherit (pkgs) lsof; inherit (pkgs) openssh; - inherit (pkgs) perl; inherit (pkgs) rsync; inherit (pkgs) wget; + }) {inherit (pkgs) bup; inherit (pkgs) curl; inherit (pkgs) git; + inherit (pkgs) gnupg; inherit (pkgs) lsof; inherit (pkgs) openssh; + inherit (pkgs) perl; inherit (pkgs) rsync; inherit (pkgs) wget; inherit (pkgs) which;}; "git-brunch" = callPackage @@ -97053,24 +97275,17 @@ self: { }) {}; "gitlab-haskell" = callPackage - ({ mkDerivation, aeson, base, bytestring, connection, directory - , filepath, http-conduit, http-types, moss, optparse-applicative - , temporary, text, time, transformers, unliftio, unliftio-core + ({ mkDerivation, aeson, base, bytestring, connection, http-conduit + , http-types, text, time, transformers, unliftio, unliftio-core }: mkDerivation { pname = "gitlab-haskell"; - version = "0.1.3"; - sha256 = "12yfq12c6jlkr08x2jhykxdydikf3x4dmkyyn15fxhajqi7f1ka2"; - isLibrary = true; - isExecutable = true; + version = "0.1.4"; + sha256 = "09va5xbb2qya149gzrm3d3q9g6s4axxx6qkv4z764dryqq7fm7ly"; libraryHaskellDepends = [ aeson base bytestring connection http-conduit http-types text time transformers unliftio unliftio-core ]; - executableHaskellDepends = [ - base bytestring directory filepath http-types moss - optparse-applicative temporary text unliftio-core - ]; description = "A Haskell library for the GitLab web API"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -98310,7 +98525,7 @@ self: { libraryToolDepends = [ c2hs ]; description = "Bindings for libgnome-keyring"; license = stdenv.lib.licenses.gpl3; - }) {inherit (pkgs.gnome3) gnome-keyring; + }) {inherit (pkgs.gnome3) gnome-keyring; inherit (pkgs) libgnome-keyring;}; "gnomevfs" = callPackage @@ -102662,7 +102877,7 @@ self: { executablePkgconfigDepends = [ libXau xcb xdmcp xlibsWrapper ]; description = "Simple clipboard manager to be integrated with rofi"; license = stdenv.lib.licenses.bsd3; - }) {inherit (pkgs.xorg) libXau; xcb = null; xdmcp = null; + }) {inherit (pkgs.xorg) libXau; xcb = null; xdmcp = null; inherit (pkgs) xlibsWrapper;}; "greg-client" = callPackage @@ -104031,9 +104246,9 @@ self: { license = stdenv.lib.licenses.lgpl21; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) gtk2; inherit (pkgs.gnome2) gtkglext; - inherit (pkgs) libGLU; inherit (pkgs.xorg) libICE; - inherit (pkgs.xorg) libSM; inherit (pkgs.xorg) libXmu; + }) {inherit (pkgs) gtk2; inherit (pkgs.gnome2) gtkglext; + inherit (pkgs) libGLU; inherit (pkgs.xorg) libICE; + inherit (pkgs.xorg) libSM; inherit (pkgs.xorg) libXmu; inherit (pkgs.xorg) libXt;}; "gtkimageview" = callPackage @@ -104421,7 +104636,7 @@ self: { license = "LGPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {cudd = null; epd = null; inherit (pkgs) mtr; + }) {cudd = null; epd = null; inherit (pkgs) mtr; inherit (pkgs) st; util = null;}; "hCM" = callPackage @@ -104582,8 +104797,8 @@ self: { }: mkDerivation { pname = "hOpenPGP"; - version = "2.8.4"; - sha256 = "0vvr86y29ncgs3j2hd5qhsxix09jf01ah8qqq6n12zsh484cr127"; + version = "2.8.5"; + sha256 = "1d5cmgj3rg8snc2b5jn9h7hb83j2hhf0c9shiiyrpr8rrl4hx2mj"; libraryHaskellDepends = [ aeson asn1-encoding attoparsec base base16-bytestring bifunctors binary binary-conduit bytestring bzlib conduit conduit-extra @@ -104618,7 +104833,7 @@ self: { broken = true; }) {}; - "hOpenPGP_2_8_5" = callPackage + "hOpenPGP_2_9" = callPackage ({ mkDerivation, aeson, asn1-encoding, attoparsec, base , base16-bytestring, bifunctors, binary, binary-conduit, bytestring , bzlib, conduit, conduit-extra, containers, criterion @@ -104632,8 +104847,8 @@ self: { }: mkDerivation { pname = "hOpenPGP"; - version = "2.8.5"; - sha256 = "1d5cmgj3rg8snc2b5jn9h7hb83j2hhf0c9shiiyrpr8rrl4hx2mj"; + version = "2.9"; + sha256 = "0xdb1ggd7pw0faan8cs3hs29sqb3bgjfhxqs5x43hh1k64k3vdjk"; libraryHaskellDepends = [ aeson asn1-encoding attoparsec base base16-bytestring bifunctors binary binary-conduit bytestring bzlib conduit conduit-extra @@ -105556,22 +105771,23 @@ self: { "hackage-repo-tool" = callPackage ({ mkDerivation, base, bytestring, Cabal, directory, filepath - , hackage-security, network, network-uri, old-time + , hackage-security, microlens, network, network-uri, old-time , optparse-applicative, tar, time, unix, zlib }: mkDerivation { pname = "hackage-repo-tool"; - version = "0.1.1.1"; - sha256 = "05r4i7zhwbsv9ci4yid57fnb5lkx254pch9arq5a11dvwsvdzvzw"; - revision = "2"; - editedCabalFile = "04ghg9chkqj3s4g24jszcpb4m8fi9qbgs04bbb1kny3c6ihin93x"; + version = "0.1.1.2"; + sha256 = "1zgsmibi24w2wsd828hnls1yv9lrl9xwsi2aay3d603j8mg8vd0r"; + revision = "1"; + editedCabalFile = "1x8cqmfyc168jrmvg2c8as1gj4qys10hyr71nmcyskvqrk5bsxf8"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - base bytestring Cabal directory filepath hackage-security network - network-uri old-time optparse-applicative tar time unix zlib + base bytestring Cabal directory filepath hackage-security microlens + network network-uri old-time optparse-applicative tar time unix + zlib ]; - description = "Utility to manage secure file-based package repositories"; + description = "Manage secure file-based package repositories"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -105616,6 +105832,8 @@ self: { pname = "hackage-security"; version = "0.6.0.0"; sha256 = "1y9vs30y474ri8b9jqkbwfkcfh7p7jaafzwxina9z0xl32d0bn1c"; + revision = "1"; + editedCabalFile = "0iw1vy9xapwrwsg38pb6lr26yprwhz1j2w2kzkqfapxmwx37v639"; libraryHaskellDepends = [ base base16-bytestring base64-bytestring bytestring Cabal containers cryptohash-sha256 directory ed25519 filepath ghc-prim @@ -106046,6 +106264,8 @@ self: { pname = "haddock-library"; version = "1.8.0"; sha256 = "15xpv29yh3kb9qq9gmws2l8m64i7phvf47y08vxc2j55101sg4vh"; + revision = "1"; + editedCabalFile = "09v6lq3ncf3ax7b6n36vhsflm488x0qc8sgc3w17m09x1jl48d99"; libraryHaskellDepends = [ base bytestring containers parsec text transformers ]; @@ -108865,26 +109085,6 @@ self: { }: mkDerivation { pname = "hasbolt"; - version = "0.1.3.5"; - sha256 = "0qd5rh0jdwhkjcz5kg1bqwd5hpz5w9ph9k0vxaam1lnjjniw7zbj"; - libraryHaskellDepends = [ - base binary bytestring connection containers data-binary-ieee754 - data-default mtl network text - ]; - testHaskellDepends = [ - base bytestring containers hex hspec QuickCheck text - ]; - description = "Haskell driver for Neo4j 3+ (BOLT protocol)"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "hasbolt_0_1_3_6" = callPackage - ({ mkDerivation, base, binary, bytestring, connection, containers - , data-binary-ieee754, data-default, hex, hspec, mtl, network - , QuickCheck, text - }: - mkDerivation { - pname = "hasbolt"; version = "0.1.3.6"; sha256 = "0sgxvgvxqykslbjslrb5mzmaaar4nbc59p94qhk7rzbjsas01vp2"; libraryHaskellDepends = [ @@ -108896,7 +109096,6 @@ self: { ]; description = "Haskell driver for Neo4j 3+ (BOLT protocol)"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hasbolt-extras" = callPackage @@ -108907,8 +109106,8 @@ self: { }: mkDerivation { pname = "hasbolt-extras"; - version = "0.0.0.24"; - sha256 = "16hybk7f8rx81a50zbj6i4isx4fi2yr7aw9n36h8qab4dxil4szy"; + version = "0.0.0.25"; + sha256 = "0cd0c6vcyfzrg3bzs1mv2c7alr7ncz5gkj6r70n2fb41mxnz9i2l"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -112168,6 +112367,17 @@ self: { broken = true; }) {}; + "haskellish" = callPackage + ({ mkDerivation, base, haskell-src-exts }: + mkDerivation { + pname = "haskellish"; + version = "0.1.1"; + sha256 = "1smgr42m4dz6yd8w34dmc3w2l06jllli831bq66l3mdbrfb3964h"; + libraryHaskellDepends = [ base haskell-src-exts ]; + description = "For parsing Haskell-ish languages"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "haskellscrabble" = callPackage ({ mkDerivation, array, arrows, base, containers, directory, errors , filepath, HUnit, listsafe, mtl, parsec, QuickCheck, random, safe @@ -112278,20 +112488,20 @@ self: { "haskey" = callPackage ({ mkDerivation, async, base, binary, bytestring, containers - , directory, exceptions, filepath, focus, haskey-btree, HUnit - , list-t, lz4, mtl, QuickCheck, random, semigroups, stm + , directory, exceptions, filepath, focus, hashable, haskey-btree + , HUnit, list-t, lz4, mtl, QuickCheck, random, semigroups, stm , stm-containers, temporary, test-framework, test-framework-hunit , test-framework-quickcheck2, text, transformers, unix, vector , xxhash-ffi }: mkDerivation { pname = "haskey"; - version = "0.3.0.2"; - sha256 = "1s24k6mwb1231j3ryd4iizday4l966vs9rcghr53k3jx2nl0h74h"; + version = "0.3.1.0"; + sha256 = "06q5gwjpgrgjq07iz7368yfghsfc2im1gbwqqixb1lqbiz7q6dbs"; libraryHaskellDepends = [ base binary bytestring containers directory exceptions filepath - focus haskey-btree list-t lz4 mtl semigroups stm stm-containers - transformers unix xxhash-ffi + focus hashable haskey-btree list-t lz4 mtl semigroups stm + stm-containers transformers unix xxhash-ffi ]; testHaskellDepends = [ async base binary bytestring containers directory exceptions @@ -112493,13 +112703,14 @@ self: { }: mkDerivation { pname = "haskoin-core"; - version = "0.9.6"; - sha256 = "1sj54ajnqdkf3fnsz5i41p0mglixabyh5csnpzlvhh0wmaca0g52"; + version = "0.9.7"; + sha256 = "04bh21sdkqzp7rlvs49wqq9lj8cyf2mm8cdjyg3zr4kqsfbw2z73"; libraryHaskellDepends = [ aeson array base base16-bytestring bytestring cereal conduit - containers cryptonite entropy hashable memory mtl murmur3 network - QuickCheck scientific secp256k1-haskell split string-conversions - text time transformers unordered-containers vector + containers cryptonite entropy hashable hspec HUnit memory mtl + murmur3 network QuickCheck safe scientific secp256k1-haskell split + string-conversions text time transformers unordered-containers + vector ]; testHaskellDepends = [ aeson base bytestring cereal containers hspec HUnit mtl QuickCheck @@ -112546,8 +112757,8 @@ self: { }: mkDerivation { pname = "haskoin-node"; - version = "0.9.13"; - sha256 = "15z6qnaj5lk6kd151nl6ddjza0ngpgx8j29ayd5pcwr59r40hl95"; + version = "0.9.14"; + sha256 = "17nd6spm2bskgnxp2v7jfb66ds2qgxzhzlvd4yhgbf63kqfhlkjl"; libraryHaskellDepends = [ base bytestring cereal conduit conduit-extra containers data-default hashable haskoin-core monad-logger mtl network nqe @@ -112625,8 +112836,8 @@ self: { }: mkDerivation { pname = "haskoin-store"; - version = "0.18.7"; - sha256 = "1cdj43n3y7j9gcw1196y9g5n188yf2dhjrj277impvlrf5y5qqs7"; + version = "0.18.9"; + sha256 = "0gfvlah265mdc52nxkb2mlq1qblli0fm7lrxhwbggjjssj0jbp05"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -113777,14 +113988,27 @@ self: { }) {}; "hasql-th" = callPackage - ({ mkDerivation, base-prelude, bytestring, template-haskell, text + ({ mkDerivation, base, bytestring, case-insensitive, containers + , contravariant, fast-builder, foldl, hashable, hasql + , headed-megaparsec, hedgehog, megaparsec, parser-combinators + , selective, template-haskell, text, text-builder, tuple-th + , unordered-containers, uuid, vector }: mkDerivation { pname = "hasql-th"; - version = "0.2.1"; - sha256 = "0lfnmlpxxzm06cr3p6b2x0wzf11913w6ps6hlv290mdd0l3wk1mg"; + version = "0.3.0.1"; + sha256 = "03wfzwf3rr83j158757llq23zi17pkpmpracwisbz4acvk0vb3s0"; libraryHaskellDepends = [ - base-prelude bytestring template-haskell text + base bytestring case-insensitive containers contravariant + fast-builder foldl hashable hasql headed-megaparsec megaparsec + parser-combinators selective template-haskell text text-builder + tuple-th unordered-containers uuid vector + ]; + testHaskellDepends = [ + base bytestring case-insensitive containers contravariant + fast-builder foldl hashable hasql headed-megaparsec hedgehog + megaparsec parser-combinators selective template-haskell text + text-builder tuple-th unordered-containers uuid vector ]; description = "Template Haskell utilities for Hasql"; license = stdenv.lib.licenses.mit; @@ -115989,8 +116213,8 @@ self: { }: mkDerivation { pname = "hedis"; - version = "0.12.9"; - sha256 = "1j0qismms4ylphm86sn6bkg10c8am234nbp6yw4lngi0axf0iz83"; + version = "0.12.10"; + sha256 = "0n9rm73h9lgrqavzjlakb95jvpg0lfjhj6grb5rgwpi4rhvqiygb"; libraryHaskellDepends = [ async base bytestring bytestring-lexing deepseq errors HTTP mtl network network-uri resource-pool scanner stm text time tls @@ -116325,7 +116549,7 @@ self: { license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {newrelic-collector-client = null; newrelic-common = null; + }) {newrelic-collector-client = null; newrelic-common = null; newrelic-transaction = null;}; "helics-wai" = callPackage @@ -117728,7 +117952,7 @@ self: { description = "File/folder watching for OS X"; license = stdenv.lib.licenses.bsd3; platforms = [ "x86_64-darwin" ]; - }) {inherit (pkgs.darwin.apple_sdk.frameworks) Cocoa; + }) {inherit (pkgs.darwin.apple_sdk.frameworks) Cocoa; inherit (pkgs.darwin.apple_sdk.frameworks) CoreServices;}; "hfusion" = callPackage @@ -119252,8 +119476,8 @@ self: { }: mkDerivation { pname = "hinterface"; - version = "0.11.0"; - sha256 = "1p878194kl4dma6xmp73j4m87yjs7lprjqm3pb81li222fcylz88"; + version = "1.0.0"; + sha256 = "18vhpmhpfam1nbh5fgbcfjnmsnsbkzq9qmr64alldlvwf6brs0kp"; libraryHaskellDepends = [ array async base binary bytestring containers cryptonite deepseq exceptions lifted-async lifted-base memory monad-control @@ -120078,55 +120302,44 @@ self: { "hledger" = callPackage ({ mkDerivation, ansi-terminal, base, base-compat-batteries - , bytestring, cmdargs, containers, criterion, data-default, Decimal - , Diff, directory, easytest, extra, filepath, hashable, haskeline - , hledger-lib, html, lucid, math-functions, megaparsec, mtl - , mtl-compat, old-time, parsec, pretty-show, process, regex-tdfa - , safe, shakespeare, split, tabular, temporary, terminfo - , test-framework, test-framework-hunit, text, time, timeit + , bytestring, cmdargs, containers, data-default, Decimal, Diff + , directory, extra, filepath, hashable, haskeline, hledger-lib + , lucid, math-functions, megaparsec, mtl, old-time, parsec + , pretty-show, process, regex-tdfa, safe, shakespeare, split + , tabular, tasty, temporary, terminfo, text, time, timeit , transformers, unordered-containers, utf8-string, utility-ht , wizards }: mkDerivation { pname = "hledger"; - version = "1.15.2"; - sha256 = "16mpj58519p4ksd0iwwkd63xxcr21k99h015l4kgi6zd934v2qix"; + version = "1.16.1"; + sha256 = "1dw04sjgji6iprs0hqxr0nynkg5qsqh20l0d48vqjkgaral4sxma"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ ansi-terminal base base-compat-batteries bytestring cmdargs - containers data-default Decimal Diff directory easytest extra - filepath hashable haskeline hledger-lib lucid math-functions - megaparsec mtl mtl-compat old-time parsec pretty-show process - regex-tdfa safe shakespeare split tabular temporary terminfo text - time timeit transformers unordered-containers utf8-string - utility-ht wizards + containers data-default Decimal Diff directory extra filepath + hashable haskeline hledger-lib lucid math-functions megaparsec mtl + old-time parsec pretty-show process regex-tdfa safe shakespeare + split tabular tasty temporary terminfo text time timeit + transformers unordered-containers utf8-string utility-ht wizards ]; executableHaskellDepends = [ ansi-terminal base base-compat-batteries bytestring cmdargs - containers data-default Decimal directory easytest extra filepath - haskeline hledger-lib math-functions megaparsec mtl mtl-compat - old-time parsec pretty-show process regex-tdfa safe shakespeare - split tabular temporary terminfo text time timeit transformers + containers data-default Decimal directory extra filepath haskeline + hledger-lib math-functions megaparsec mtl old-time parsec + pretty-show process regex-tdfa safe shakespeare split tabular tasty + temporary terminfo text time timeit transformers unordered-containers utf8-string utility-ht wizards ]; testHaskellDepends = [ ansi-terminal base base-compat-batteries bytestring cmdargs - containers data-default Decimal directory easytest extra filepath - haskeline hledger-lib math-functions megaparsec mtl mtl-compat - old-time parsec pretty-show process regex-tdfa safe shakespeare - split tabular temporary terminfo test-framework - test-framework-hunit text time timeit transformers + containers data-default Decimal directory extra filepath haskeline + hledger-lib math-functions megaparsec mtl old-time parsec + pretty-show process regex-tdfa safe shakespeare split tabular tasty + temporary terminfo text time timeit transformers unordered-containers utf8-string utility-ht wizards ]; - benchmarkHaskellDepends = [ - ansi-terminal base base-compat-batteries bytestring cmdargs - containers criterion data-default Decimal directory easytest extra - filepath haskeline hledger-lib html math-functions megaparsec mtl - mtl-compat old-time parsec pretty-show process regex-tdfa safe - shakespeare split tabular temporary terminfo text time timeit - transformers unordered-containers utf8-string utility-ht wizards - ]; description = "Command-line interface for the hledger accounting tool"; license = stdenv.lib.licenses.gpl3; maintainers = with stdenv.lib.maintainers; [ peti ]; @@ -120227,8 +120440,8 @@ self: { pname = "hledger-iadd"; version = "1.3.9"; sha256 = "07g48w4099m4vm7z5hrg9zzd2v2yhy7kcv40902njz6v8cklgdgq"; - revision = "1"; - editedCabalFile = "18qjkl79gwmdgk6vl8cg3m94wm0qw30kxn4lvlnj9n6gnv2p0b3k"; + revision = "3"; + editedCabalFile = "1c06v50lhhzsa4872j9khqvga7pvfrvns8sp3srn9vfwxbiw5x7z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -120294,33 +120507,33 @@ self: { ({ mkDerivation, ansi-terminal, array, base, base-compat-batteries , blaze-markup, bytestring, call-stack, cassava, cassava-megaparsec , cmdargs, containers, data-default, Decimal, deepseq, directory - , doctest, easytest, extra, fgl, file-embed, filepath, Glob - , hashtables, megaparsec, mtl, mtl-compat, old-time, parsec - , parser-combinators, pretty-show, regex-tdfa, safe, split, tabular + , extra, fgl, file-embed, filepath, Glob, hashtables, megaparsec + , mtl, old-time, parsec, parser-combinators, pretty-show + , regex-tdfa, safe, split, tabular, tasty, tasty-hunit , template-haskell, text, time, timeit, transformers, uglymemo , utf8-string }: mkDerivation { pname = "hledger-lib"; - version = "1.15.2"; - sha256 = "0q6ppizyadilxma3l8bwlswa6syyzkdri0yq0bqfmdzxvh9s3bcm"; + version = "1.16.1"; + sha256 = "14rwigcmal1dy286qnw93nnn4rl42hgcnz882wmjmhpyjrs4l5ig"; libraryHaskellDepends = [ ansi-terminal array base base-compat-batteries blaze-markup bytestring call-stack cassava cassava-megaparsec cmdargs containers - data-default Decimal deepseq directory easytest extra fgl - file-embed filepath Glob hashtables megaparsec mtl mtl-compat - old-time parsec parser-combinators pretty-show regex-tdfa safe - split tabular template-haskell text time timeit transformers - uglymemo utf8-string + data-default Decimal deepseq directory extra fgl file-embed + filepath Glob hashtables megaparsec mtl old-time parsec + parser-combinators pretty-show regex-tdfa safe split tabular tasty + tasty-hunit template-haskell text time timeit transformers uglymemo + utf8-string ]; testHaskellDepends = [ ansi-terminal array base base-compat-batteries blaze-markup bytestring call-stack cassava cassava-megaparsec cmdargs containers - data-default Decimal deepseq directory doctest easytest extra fgl - file-embed filepath Glob hashtables megaparsec mtl mtl-compat - old-time parsec parser-combinators pretty-show regex-tdfa safe - split tabular template-haskell text time timeit transformers - uglymemo utf8-string + data-default Decimal deepseq directory extra fgl file-embed + filepath Glob hashtables megaparsec mtl old-time parsec + parser-combinators pretty-show regex-tdfa safe split tabular tasty + tasty-hunit template-haskell text time timeit transformers uglymemo + utf8-string ]; description = "Core data types, parsers and functionality for the hledger accounting tools"; license = stdenv.lib.licenses.gpl3; @@ -120356,8 +120569,8 @@ self: { }: mkDerivation { pname = "hledger-ui"; - version = "1.15"; - sha256 = "047ssmix7pxq61hknd40z983aw8110zxzh6z2ick8xkhdsnw3s1q"; + version = "1.16.1"; + sha256 = "0cn1pwr87lvi65m619v845vj17v27hp3h6fcgy1cpb4gjsdvq861"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -120367,7 +120580,7 @@ self: { process safe split text text-zipper time transformers unix vector vty ]; - description = "Curses-style user interface for the hledger accounting tool"; + description = "Terminal user interface for the hledger accounting tool"; license = stdenv.lib.licenses.gpl3; maintainers = with stdenv.lib.maintainers; [ peti ]; }) {}; @@ -120395,24 +120608,25 @@ self: { ({ mkDerivation, aeson, base, blaze-html, blaze-markup, bytestring , case-insensitive, clientsession, cmdargs, conduit, conduit-extra , containers, data-default, Decimal, directory, filepath, hjsmin - , hledger, hledger-lib, http-client, http-conduit, http-types, json + , hledger, hledger-lib, http-client, http-conduit, http-types , megaparsec, mtl, semigroups, shakespeare, template-haskell, text - , time, transformers, wai, wai-extra, wai-handler-launch, warp - , yaml, yesod, yesod-core, yesod-form, yesod-static + , time, transformers, utf8-string, wai, wai-cors, wai-extra + , wai-handler-launch, warp, yaml, yesod, yesod-core, yesod-form + , yesod-static }: mkDerivation { pname = "hledger-web"; - version = "1.15"; - sha256 = "1m54m8v1fzlazrh9hhv4ff7jrg95d03i8wx360l1y731gry54zw3"; + version = "1.16.1"; + sha256 = "1mn3mk4v6akbzl2hc8k89q4njffxpj832h5pywy9rj2mc7fbw5s5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson base blaze-html blaze-markup bytestring case-insensitive clientsession cmdargs conduit conduit-extra containers data-default Decimal directory filepath hjsmin hledger hledger-lib http-client - http-conduit http-types json megaparsec mtl semigroups shakespeare - template-haskell text time transformers wai wai-extra - wai-handler-launch warp yaml yesod yesod-core yesod-form + http-conduit http-types megaparsec mtl semigroups shakespeare + template-haskell text time transformers utf8-string wai wai-cors + wai-extra wai-handler-launch warp yaml yesod yesod-core yesod-form yesod-static ]; executableHaskellDepends = [ base ]; @@ -120503,8 +120717,8 @@ self: { }: mkDerivation { pname = "hlint"; - version = "2.2.4"; - sha256 = "00703miyzfwsypsds69hk74dk4hfmrkg6zizib3wc0p7mk2x1z5d"; + version = "2.2.5"; + sha256 = "1ygyk1rg07j5x1qa6af3a76ps1cqicz4cv9i986kcfpzhzlf7iqd"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -120621,8 +120835,8 @@ self: { }: mkDerivation { pname = "hlrdb-core"; - version = "0.1.4.0"; - sha256 = "1sn23347mm9r4j45ba2jz4vw7swh6jgn5fds9xnwgr8rch9b0ljc"; + version = "0.1.5.0"; + sha256 = "0aznzrwv021nppb5cxbpnr7hiajny4s40diz6kcmddsbml56xmk9"; libraryHaskellDepends = [ base bytestring hashable hedis lens mtl profunctors random time unordered-containers @@ -122515,8 +122729,8 @@ self: { }: mkDerivation { pname = "hoogle"; - version = "5.0.17.12"; - sha256 = "114m87b5zyjdqk86hxh71vwdl9v1hm6hls49zd1f8rdsiay8kczb"; + version = "5.0.17.13"; + sha256 = "1lbn4ji8l20pvyn5r2cdys0cnxhhac1559q54c6kb4vz4fr0a82p"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -122704,7 +122918,7 @@ self: { broken = true; }) {}; - "hopenpgp-tools_0_22" = callPackage + "hopenpgp-tools_0_23" = callPackage ({ mkDerivation, aeson, alex, array, attoparsec, base , base16-bytestring, binary, binary-conduit, bytestring, conduit , conduit-extra, containers, crypto-pubkey, cryptohash, cryptonite @@ -122717,8 +122931,8 @@ self: { }: mkDerivation { pname = "hopenpgp-tools"; - version = "0.22"; - sha256 = "1rcjwbnns5fj8x9sgyjlpjda2srmcixvdlmia4nid5nq01clc0c4"; + version = "0.23"; + sha256 = "1sgqx8b1sq89hpjzbdmkjsmrfagh5v0jfxyqphzkh1bq2zydj0jl"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -123244,7 +123458,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) freeglut; inherit (pkgs) libGL; + }) {inherit (pkgs) freeglut; inherit (pkgs) libGL; inherit (pkgs) libGLU;}; "hp2any-manager" = callPackage @@ -123883,8 +124097,8 @@ self: { }: mkDerivation { pname = "hprotoc"; - version = "2.4.12"; - sha256 = "0xj000ikh3y8dg5sbrl7ycb471qgra4khmk4kq079biasjvhf58a"; + version = "2.4.13"; + sha256 = "0z88kiirwpnzw6hxg99kg42j2hkf002vcsmbcm7nqdfqajrggiy0"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -124426,7 +124640,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {brotlidec = null; brotlienc = null; libbrotlidec = null; + }) {brotlidec = null; brotlienc = null; libbrotlidec = null; libbrotlienc = null;}; "hs-captcha" = callPackage @@ -126618,7 +126832,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) blas; inherit (pkgs) gsl; + }) {inherit (pkgs) blas; inherit (pkgs) gsl; inherit (pkgs) liblapack;}; "hsilop" = callPackage @@ -127001,10 +127215,10 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {GraphicsMagick = null; inherit (pkgs) bzip2; freetype2 = null; - inherit (pkgs) jasper; inherit (pkgs) lcms; - inherit (pkgs) libjpeg; inherit (pkgs) libpng; - inherit (pkgs) libxml2; tiff = null; wmflite = null; + }) {GraphicsMagick = null; inherit (pkgs) bzip2; freetype2 = null; + inherit (pkgs) jasper; inherit (pkgs) lcms; + inherit (pkgs) libjpeg; inherit (pkgs) libpng; + inherit (pkgs) libxml2; tiff = null; wmflite = null; inherit (pkgs) zlib;}; "hsmisc" = callPackage @@ -128857,7 +129071,7 @@ self: { license = "GPL"; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) ncurses; inherit (pkgs) readline; + }) {inherit (pkgs) ncurses; inherit (pkgs) readline; swipl = null;}; "hsx" = callPackage @@ -130212,8 +130426,8 @@ self: { }: mkDerivation { pname = "http-io-streams"; - version = "0.1.1.0"; - sha256 = "1f6galfrdvk5r83vxmmrvmq4p5hyv302ghnyra0w4wxmjq9lilc5"; + version = "0.1.2.0"; + sha256 = "1xn3lbpxsbl79qgaq9qmhlr78g44h0qpx0jyyb3z8q28z5p39wcy"; libraryHaskellDepends = [ attoparsec base base64-bytestring blaze-builder brotli-streams bytestring case-insensitive containers directory HsOpenSSL @@ -131735,42 +131949,21 @@ self: { }) {}; "hw-bits" = callPackage - ({ mkDerivation, base, bytestring, criterion, hedgehog, hspec - , hspec-discover, hw-hspec-hedgehog, hw-int, hw-prim - , hw-string-parse, vector + ({ mkDerivation, base, bitvec, bytestring, criterion, deepseq + , hedgehog, hspec, hspec-discover, hw-hspec-hedgehog, hw-int + , hw-prim, hw-string-parse, vector }: mkDerivation { pname = "hw-bits"; - version = "0.7.0.8"; - sha256 = "1yrck20adphrqai9nq8qxyi3l5y7gx9gjvr4vgdzg39mnl6057s4"; - libraryHaskellDepends = [ - base bytestring hw-int hw-prim hw-string-parse vector - ]; - testHaskellDepends = [ - base bytestring hedgehog hspec hw-hspec-hedgehog hw-prim vector - ]; - testToolDepends = [ hspec-discover ]; - benchmarkHaskellDepends = [ base criterion vector ]; - description = "Bit manipulation"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; - }) {}; - - "hw-bits_0_7_0_9" = callPackage - ({ mkDerivation, base, bytestring, criterion, deepseq, hedgehog - , hspec, hspec-discover, hw-hspec-hedgehog, hw-int, hw-prim - , hw-string-parse, vector - }: - mkDerivation { - pname = "hw-bits"; - version = "0.7.0.9"; - sha256 = "0k10r3xyk030h4j9mv7wksglwqm5i3jhfzm7fy6qw0ddqp59nynq"; + version = "0.7.1.0"; + sha256 = "0r4jinz2h5zkjap6f6qrjgfq6xhaz3j34fjwawv8qvgc4qgq7bil"; libraryHaskellDepends = [ - base bytestring deepseq hw-int hw-prim hw-string-parse vector + base bitvec bytestring deepseq hw-int hw-prim hw-string-parse + vector ]; testHaskellDepends = [ - base bytestring hedgehog hspec hw-hspec-hedgehog hw-prim vector + base bitvec bytestring hedgehog hspec hw-hspec-hedgehog hw-prim + vector ]; testToolDepends = [ hspec-discover ]; benchmarkHaskellDepends = [ base criterion vector ]; @@ -132181,6 +132374,36 @@ self: { broken = true; }) {}; + "hw-ip_2_4_0_1" = callPackage + ({ mkDerivation, appar, base, binary, bytestring, containers + , generic-lens, hedgehog, hspec, hspec-discover, hw-bits + , hw-hspec-hedgehog, iproute, lens, optparse-applicative, text + }: + mkDerivation { + pname = "hw-ip"; + version = "2.4.0.1"; + sha256 = "0ypz0m5vnwirxap17ws44a0q6vfbg48dk6n8gb9aii2hfcdapds0"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + appar base containers generic-lens hedgehog hw-bits iproute text + ]; + executableHaskellDepends = [ + appar base binary bytestring generic-lens lens optparse-applicative + text + ]; + testHaskellDepends = [ + appar base generic-lens hedgehog hspec hw-bits hw-hspec-hedgehog + text + ]; + testToolDepends = [ hspec-discover ]; + doHaddock = false; + description = "Library for manipulating IP addresses and CIDR blocks"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "hw-json" = callPackage ({ mkDerivation, ansi-wl-pprint, array, attoparsec, base , bits-extra, bytestring, criterion, directory, dlist, generic-lens @@ -132682,19 +132905,20 @@ self: { }) {}; "hw-rankselect-base" = callPackage - ({ mkDerivation, base, bits-extra, criterion, hedgehog, hspec - , hspec-discover, hw-bits, hw-hedgehog, hw-hspec-hedgehog, hw-int - , hw-prim, hw-string-parse, QuickCheck, vector + ({ mkDerivation, base, bits-extra, bitvec, criterion, hedgehog + , hspec, hspec-discover, hw-bits, hw-hedgehog, hw-hspec-hedgehog + , hw-int, hw-prim, hw-string-parse, QuickCheck, vector }: mkDerivation { pname = "hw-rankselect-base"; - version = "0.3.2.3"; - sha256 = "1gkgbrpklzzfxs5b2w98l5zr48pvdc1l4zll77s2ya7lw0hc69m5"; + version = "0.3.3.0"; + sha256 = "17h4kmi9zcgm4sdpbmqh6rzygz7w0v95lfc6rmhc9a8bmmg30i5b"; libraryHaskellDepends = [ - base bits-extra hw-bits hw-int hw-prim hw-string-parse vector + base bits-extra bitvec hw-bits hw-int hw-prim hw-string-parse + vector ]; testHaskellDepends = [ - base bits-extra hedgehog hspec hw-bits hw-hedgehog + base bits-extra bitvec hedgehog hspec hw-bits hw-hedgehog hw-hspec-hedgehog hw-prim QuickCheck vector ]; testToolDepends = [ hspec-discover ]; @@ -136634,25 +136858,6 @@ self: { }: mkDerivation { pname = "inflections"; - version = "0.4.0.4"; - sha256 = "0lspb0xpfj4q6wrzgss7pfjmr6xb5clj7y686vsairbkpcj3cfcl"; - libraryHaskellDepends = [ - base exceptions megaparsec text unordered-containers - ]; - testHaskellDepends = [ - base containers hspec hspec-megaparsec megaparsec QuickCheck text - ]; - description = "Inflections library for Haskell"; - license = stdenv.lib.licenses.mit; - }) {}; - - "inflections_0_4_0_5" = callPackage - ({ mkDerivation, base, containers, exceptions, hspec - , hspec-megaparsec, megaparsec, QuickCheck, text - , unordered-containers - }: - mkDerivation { - pname = "inflections"; version = "0.4.0.5"; sha256 = "0fdq3iwa2vgb5k19ck6jxzh7f1xsf1kpwx4p3agpdpsrylrcanvb"; libraryHaskellDepends = [ @@ -136663,7 +136868,6 @@ self: { ]; description = "Inflections library for Haskell"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "inflist" = callPackage @@ -136963,14 +137167,14 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "inline-c-cpp_0_4_0_0" = callPackage + "inline-c-cpp_0_4_0_1" = callPackage ({ mkDerivation, base, containers, hspec, inline-c, safe-exceptions , template-haskell }: mkDerivation { pname = "inline-c-cpp"; - version = "0.4.0.0"; - sha256 = "10d0yxs3jfkws440wzxrzwcyxjszv8c3f45hbfmj5ln0b0hpfrq0"; + version = "0.4.0.1"; + sha256 = "1bsmm6sqxjzlk6mdq5a8vwsc1cy0ag0lvajdpsbqq7vradj54yqq"; libraryHaskellDepends = [ base containers inline-c safe-exceptions template-haskell ]; @@ -138071,15 +138275,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "intro_0_6_0_0" = callPackage + "intro_0_6_0_1" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, dlist , extra, hashable, lens, mtl, QuickCheck, safe, text, transformers , unordered-containers, writer-cps-mtl }: mkDerivation { pname = "intro"; - version = "0.6.0.0"; - sha256 = "11a9xnamk8n6fns86az1rhq2grx5173ywyby944jn2zvjkba7fkc"; + version = "0.6.0.1"; + sha256 = "1kka6dnlyqppjx9ykk3zixfyslr8cf4ja6sa2hgq6h69mmsicp67"; libraryHaskellDepends = [ base bytestring containers deepseq dlist extra hashable mtl safe text transformers unordered-containers writer-cps-mtl @@ -138825,25 +139029,6 @@ self: { }: mkDerivation { pname = "iproute"; - version = "1.7.7"; - sha256 = "0gab5930nvzrpvisx3x43ydnp2rd4fbmy9cq1zpgqy1adx5gx8z6"; - libraryHaskellDepends = [ - appar base byteorder containers network - ]; - testHaskellDepends = [ - appar base byteorder containers doctest hspec network QuickCheck - safe - ]; - description = "IP Routing Table"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "iproute_1_7_8" = callPackage - ({ mkDerivation, appar, base, byteorder, containers, doctest, hspec - , network, QuickCheck, safe - }: - mkDerivation { - pname = "iproute"; version = "1.7.8"; sha256 = "0k2qzdw36qp9qs2j0bxsn95ymk3wpjvw6s5c1535aw677gw19bad"; libraryHaskellDepends = [ @@ -138855,7 +139040,6 @@ self: { ]; description = "IP Routing Table"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "iptables-helpers" = callPackage @@ -140209,8 +140393,8 @@ self: { }: mkDerivation { pname = "ixset"; - version = "1.1.1"; - sha256 = "1wjv6jfkv5z5j3af6dg7zlbir780mshq01x2wzlyav5dwr40di3m"; + version = "1.1.1.1"; + sha256 = "1d3h53sq8i8azzr71yi4h5zma2bb2f623gpfw25x2kd4slhpkrgf"; libraryHaskellDepends = [ base containers safecopy syb syb-with-class template-haskell ]; @@ -140970,10 +141154,8 @@ self: { }: mkDerivation { pname = "jmacro"; - version = "0.6.16"; - sha256 = "1kyrvxg5fwwrwv72aby694ar071yl2xmnfkjyrwi5wbc7hsb8rda"; - revision = "1"; - editedCabalFile = "0g7fn738ljrhh6ydmvkigj9znhh2szdvp79kqxw62m4ryqan23qq"; + version = "0.6.17"; + sha256 = "14vmnaqr3lhcj7y5rj4jgm2w89kkznfksy53pinmc1xq1bd8b7px"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -145695,12 +145877,12 @@ self: { }: mkDerivation { pname = "lambda-options"; - version = "1.0.2.0"; - sha256 = "04h7i79iiq91606x3k7zr2gs3f7apswwv9xxv5lf4qr1h3i4lfix"; + version = "1.1.0.0"; + sha256 = "0ihbwml2l4jyd3h2kj5qz7fxzzkq47xk4fkybhp1rnfzxjlqfib3"; libraryHaskellDepends = [ base containers funspection mtl read-bounded ]; - description = "Declarative command-line parser using type-driven pattern matching"; + description = "Declarative command-line parser with type-driven pattern matching"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -146632,8 +146814,8 @@ self: { ({ mkDerivation, base, pretty }: mkDerivation { pname = "language-c99"; - version = "0.1.1"; - sha256 = "1a6n9n3jzplwgm6136rvhm6zmkvnhxz0nw1bfplikg8kkfgbp5al"; + version = "0.1.2"; + sha256 = "0k4a1chca328sa3w7aghhi446kqfrbp6h5jaj2rddd8f8qjz5pag"; libraryHaskellDepends = [ base pretty ]; description = "An implementation of the C99 AST that strictly follows the standard"; license = stdenv.lib.licenses.mit; @@ -149657,8 +149839,8 @@ self: { pname = "lenz-template"; version = "0.2.0.0"; sha256 = "0g073wfh8522hvmy80dp8an5jr6qjnkfj3119ms3sir7dkfzljqn"; - revision = "4"; - editedCabalFile = "0fzi4niagdk0wmjbgbbvs5gd9jhs2nwdpgyg9rr7l8i6x433jxpk"; + revision = "5"; + editedCabalFile = "0l75fkl778r9kgigyiijnkw2wn2kd4xkpjj7s3bkswg75dvnrbk0"; libraryHaskellDepends = [ base base-unicode-symbols containers lenz template-haskell ]; @@ -149966,23 +150148,26 @@ self: { }) {}; "libarchive" = callPackage - ({ mkDerivation, base, bytestring, c2hs, chs-cabal - , composition-prelude, criterion, deepseq, directory, dlist - , filepath, hspec, libarchive, mtl, tar, tar-conduit, temporary - , unix-compat + ({ mkDerivation, base, bytestring, c2hs, Cabal, chs-cabal + , composition-prelude, criterion, deepseq, dir-traverse, directory + , dlist, filepath, hspec, libarchive, mtl, tar, tar-conduit + , temporary, unix-compat }: mkDerivation { pname = "libarchive"; - version = "2.0.0.2"; - sha256 = "126cq8sg2siirxkg1718n86xhlqxa1a96339dm1mw9r68ckj2jd0"; - setupHaskellDepends = [ base chs-cabal ]; + version = "2.1.2.0"; + sha256 = "00j1xrfwcmfb2dhz04dy4p2aryp751mmp6hpdcbm2xdhzdxrgkjf"; + setupHaskellDepends = [ base Cabal chs-cabal ]; libraryHaskellDepends = [ base bytestring composition-prelude deepseq dlist filepath mtl unix-compat ]; libraryPkgconfigDepends = [ libarchive ]; libraryToolDepends = [ c2hs ]; - testHaskellDepends = [ base bytestring directory filepath hspec ]; + testHaskellDepends = [ + base bytestring composition-prelude dir-traverse directory filepath + hspec mtl temporary + ]; benchmarkHaskellDepends = [ base bytestring criterion tar tar-conduit temporary ]; @@ -150954,26 +151139,6 @@ self: { "lift-generics" = callPackage ({ mkDerivation, base, base-compat, generic-deriving, ghc-prim - , hspec, template-haskell - }: - mkDerivation { - pname = "lift-generics"; - version = "0.1.2"; - sha256 = "0kk05dp6n93jgxq4x1lrckjrca6lrwa7qklr3vpzc6iyrlbvv7qf"; - revision = "3"; - editedCabalFile = "0ackkmjfqxyxhy9w03zlqvmi68la9yv4jf0sc8qdhyr5y30ac68s"; - libraryHaskellDepends = [ - base generic-deriving ghc-prim template-haskell - ]; - testHaskellDepends = [ - base base-compat generic-deriving hspec template-haskell - ]; - description = "GHC.Generics-based Language.Haskell.TH.Syntax.lift implementation"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "lift-generics_0_1_3" = callPackage - ({ mkDerivation, base, base-compat, generic-deriving, ghc-prim , hspec, hspec-discover, template-haskell }: mkDerivation { @@ -150989,7 +151154,6 @@ self: { testToolDepends = [ hspec-discover ]; description = "GHC.Generics-based Language.Haskell.TH.Syntax.lift implementation"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "lift-read-show" = callPackage @@ -152063,8 +152227,8 @@ self: { pname = "linux-evdev"; version = "0.3.2"; sha256 = "04ajbcvn8i2xa678f3sgbbrn00rxm1k86wrj9n6w2r8h2yda9s9r"; - revision = "1"; - editedCabalFile = "0s7yb9wwh5rp4v2phm5lih29f033rgffldhkm9i2mxsag2qbfg0k"; + revision = "2"; + editedCabalFile = "1gnjyc8q7xq60pm362hwibwh97jw8pv66xvqv88cm9nbh0ccf6q2"; libraryHaskellDepends = [ base bytestring time unix ]; description = "Bindings to Linux evdev input device interface"; license = stdenv.lib.licenses.bsd3; @@ -152356,7 +152520,7 @@ self: { description = "Predicate Abstraction-based Horn-Clause/Implication Constraint Solver"; license = stdenv.lib.licenses.bsd3; maintainers = with stdenv.lib.maintainers; [ peti ]; - }) {inherit (pkgs) git; inherit (pkgs) nettools; + }) {inherit (pkgs) git; inherit (pkgs) nettools; inherit (pkgs) ocaml; inherit (pkgs) z3;}; "liquidhaskell" = callPackage @@ -153129,8 +153293,8 @@ self: { }: mkDerivation { pname = "llvm-extra"; - version = "0.8.2"; - sha256 = "0fv2q05w86xqak5b8w26iy9szzc6khghc622dgqkjywd9b72xs1s"; + version = "0.8.3"; + sha256 = "08d1ywx1m82qdyrcg607mbi7szg7mg4vszbnz4i3rgj9snlqj8hr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -153453,8 +153617,8 @@ self: { }: mkDerivation { pname = "llvm-tf"; - version = "3.1.2"; - sha256 = "0k5aj63hl78h8lkxizragvgh57yzzc5ns7h8kz93wicsdxaca8cn"; + version = "3.9"; + sha256 = "02x2pq4p9dgal6fri9w1r6dj37m0l8jh0gq6ry2xq0rmq2mz70w4"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -155915,8 +156079,8 @@ self: { }: mkDerivation { pname = "lzlib"; - version = "0.3.0.0"; - sha256 = "1gav8x226703k7jsjbw4g6y74xh2id5adlnqb7hpwv314d45v76a"; + version = "0.3.0.1"; + sha256 = "0rq7kafqnv16313ymcq6vcslgf4ls4zjw7n5i73vp7iwsh80pl5d"; libraryHaskellDepends = [ base bytestring ]; libraryToolDepends = [ c2hs ]; testHaskellDepends = [ base bytestring directory hspec ]; @@ -158134,32 +158298,24 @@ self: { broken = true; }) {}; - "massiv" = callPackage - ({ mkDerivation, base, bytestring, Cabal, cabal-doctest - , data-default-class, deepseq, doctest, exceptions - , mersenne-random-pure64, primitive, QuickCheck, random, scheduler - , splitmix, template-haskell, unliftio-core, vector + "mason" = callPackage + ({ mkDerivation, base, bytestring, ghc-prim, integer-gmp, network + , text }: mkDerivation { - pname = "massiv"; - version = "0.4.3.0"; - sha256 = "0sydba4dr9y0ap8d0sqr52x1pi2qq56ciznznjgdzz6f5gip667c"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; + pname = "mason"; + version = "0.1"; + sha256 = "1h9ch2q84n9hbcr6nvb7vllxb05m81vjwlk1vkarp31qjbfcmh29"; libraryHaskellDepends = [ - base bytestring data-default-class deepseq exceptions primitive - scheduler unliftio-core vector - ]; - testHaskellDepends = [ - base doctest mersenne-random-pure64 QuickCheck random splitmix - template-haskell + base bytestring ghc-prim integer-gmp network text ]; - description = "Massiv (Массив) is an Array Library"; + description = "Fast and extensible bytestring builder"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; }) {}; - "massiv_0_4_4_0" = callPackage + "massiv" = callPackage ({ mkDerivation, base, bytestring, Cabal, cabal-doctest , data-default-class, deepseq, doctest, exceptions , mersenne-random-pure64, primitive, QuickCheck, random, scheduler @@ -162745,23 +162901,23 @@ self: { }) {}; "mmsyn6ukr" = callPackage - ({ mkDerivation, base, bytestring, mmsyn2, mmsyn3, mmsyn5, process - , vector + ({ mkDerivation, base, bytestring, directory, mmsyn2, mmsyn3 + , mmsyn5, process, vector }: mkDerivation { pname = "mmsyn6ukr"; - version = "0.3.2.0"; - sha256 = "1qv34s1aypm43xf51bf7mlp7jbkfcgsz8gil7xcly50is1a19z3n"; + version = "0.5.1.0"; + sha256 = "1jmbfs0yi7r9lmaxq3dfyrw1rrwhknb7v4xfhrz3w7s8jg3vqs2x"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base bytestring mmsyn2 mmsyn3 mmsyn5 process vector + base bytestring directory mmsyn2 mmsyn3 mmsyn5 process vector ]; executableHaskellDepends = [ - base bytestring mmsyn2 mmsyn3 mmsyn5 process vector + base bytestring directory mmsyn2 mmsyn3 mmsyn5 process vector ]; - description = "Can be used as a musical instrument synthesizer or for Ukrainian language listening"; + description = "A musical instrument synthesizer or a tool for Ukrainian language listening"; license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -163425,12 +163581,14 @@ self: { }) {}; "monad-codec" = callPackage - ({ mkDerivation, base, binary, containers, data-lens, mtl }: + ({ mkDerivation, base, binary, containers, data-lens-light, mtl }: mkDerivation { pname = "monad-codec"; - version = "0.2.0"; - sha256 = "0jim6hk891jby2gch6f1k4262jm8fl9jgl808dj204ylz8w1475l"; - libraryHaskellDepends = [ base binary containers data-lens mtl ]; + version = "0.2.1"; + sha256 = "0n9mjzx6p75nm4f7ndlha9jmyvwdxaknhnds9cm8p4sj9mpsmgid"; + libraryHaskellDepends = [ + base binary containers data-lens-light mtl + ]; description = "Monadic conversion between complex data structures and unique integers"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -163739,29 +163897,6 @@ self: { }: mkDerivation { pname = "monad-logger"; - version = "0.3.30"; - sha256 = "102l0v75hbvkmrypiyg4ybb6rbc7nij5nxs1aihmqfdpg04rkkp7"; - revision = "1"; - editedCabalFile = "0gm3gqbxkj8447js4a672snz0ir78syk890nqdmjb18hsjqy5p6a"; - libraryHaskellDepends = [ - base bytestring conduit conduit-extra exceptions fast-logger - lifted-base monad-control monad-loops mtl resourcet stm stm-chans - template-haskell text transformers transformers-base - transformers-compat unliftio-core - ]; - description = "A class of monads which can log messages"; - license = stdenv.lib.licenses.mit; - }) {}; - - "monad-logger_0_3_31" = callPackage - ({ mkDerivation, base, bytestring, conduit, conduit-extra - , exceptions, fast-logger, lifted-base, monad-control, monad-loops - , mtl, resourcet, stm, stm-chans, template-haskell, text - , transformers, transformers-base, transformers-compat - , unliftio-core - }: - mkDerivation { - pname = "monad-logger"; version = "0.3.31"; sha256 = "0awr06bh5d51kci2w2xsj34qvh98sb6dm48a4k05k8awv8hrrpmd"; libraryHaskellDepends = [ @@ -163772,7 +163907,6 @@ self: { ]; description = "A class of monads which can log messages"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monad-logger-json" = callPackage @@ -163814,21 +163948,6 @@ self: { }: mkDerivation { pname = "monad-logger-syslog"; - version = "0.1.5.0"; - sha256 = "0y96f5qan5na32s8xilky7z30mc7yci1s5i3585aqvqsyyvshchf"; - libraryHaskellDepends = [ - base bytestring fast-logger hsyslog monad-logger text transformers - ]; - description = "syslog output for monad-logger"; - license = stdenv.lib.licenses.mit; - }) {}; - - "monad-logger-syslog_0_1_6_0" = callPackage - ({ mkDerivation, base, bytestring, fast-logger, hsyslog - , monad-logger, text, transformers - }: - mkDerivation { - pname = "monad-logger-syslog"; version = "0.1.6.0"; sha256 = "1n4r0fl043r18683ym3k03sdm3b9wlxfzjgmnxi804kwna639rj3"; libraryHaskellDepends = [ @@ -163836,7 +163955,6 @@ self: { ]; description = "syslog output for monad-logger"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monad-loops" = callPackage @@ -164616,7 +164734,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {gecodeint = null; gecodekernel = null; gecodesearch = null; + }) {gecodeint = null; gecodekernel = null; gecodesearch = null; gecodeset = null; gecodesupport = null;}; "monadio-unwrappable" = callPackage @@ -165329,8 +165447,8 @@ self: { pname = "months"; version = "0.1"; sha256 = "000fqmd5j3pxmfa5bpyk5fd0hbn9iq3g5v1slk4hrjdjm8k19wa0"; - revision = "1"; - editedCabalFile = "0d94g382scfwidsqmy417pz19748gs5zx2xykcg4vjwz1j3c47am"; + revision = "2"; + editedCabalFile = "030d693d4acc3zlha2rjzalrqn8i5pyqkw0zdp3i1hjr0694hwaf"; libraryHaskellDepends = [ aeson attoparsec base base-compat cassava deepseq hashable http-api-data intervals lens lucid QuickCheck swagger2 text @@ -167863,6 +167981,26 @@ self: { broken = true; }) {}; + "musicw" = callPackage + ({ mkDerivation, array, base, bytestring, containers, data-default + , file-embed, ghcjs-base, ghcjs-dom, ghcjs-prim, json, monad-loops + , mtl, safe, text, time, transformers + }: + mkDerivation { + pname = "musicw"; + version = "0.3.0"; + sha256 = "143yxcj9c1wabg2nmm3ljpdi1r2ah9mf1c8hc2m74gwq08dl78zj"; + libraryHaskellDepends = [ + array base bytestring containers data-default file-embed ghcjs-base + ghcjs-dom ghcjs-prim json monad-loops mtl safe text time + transformers + ]; + description = "Sound synthesis library, to be used with GHCJS and Web Audio API"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {ghcjs-prim = null;}; + "musicxml" = callPackage ({ mkDerivation, base, containers, directory, HaXml, old-time , pretty @@ -169176,7 +169314,7 @@ self: { license = stdenv.lib.licenses.isc; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {GLEW = null; inherit (pkgs) glew; inherit (pkgs) libGL; + }) {GLEW = null; inherit (pkgs) glew; inherit (pkgs) libGL; inherit (pkgs) libGLU;}; "nanovg-simple" = callPackage @@ -169621,8 +169759,8 @@ self: { }: mkDerivation { pname = "neat-interpolation"; - version = "0.3.2.4"; - sha256 = "0lhpjckwhzlvx4cdhrwprwb85vc7hc44ybvk5nswgn7z73cp0wyy"; + version = "0.3.2.5"; + sha256 = "09nb0bypjpfxcm71012c2xxfrq5drvd1nhdmnmhk8wc0r8254g8c"; libraryHaskellDepends = [ base base-prelude megaparsec template-haskell text ]; @@ -169806,8 +169944,8 @@ self: { }: mkDerivation { pname = "nerf"; - version = "0.5.3"; - sha256 = "18rkjgk2r6784mjbdd2lydv9yac252xvj18m78bbaplnac1504ak"; + version = "0.5.4.1"; + sha256 = "1dwfm00r64vi6by92ggi184747v2mq94fbyl18r46icvgq0h1dl2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -169815,8 +169953,12 @@ self: { dawg IntervalMap monad-ox mtl network polimorf polysoup sgd tagsoup text text-binary tokenize vector ]; - executableHaskellDepends = [ directory filepath temporary ]; - description = "Nerf, the named entity recognition tool based on linear-chain CRFs"; + executableHaskellDepends = [ + base binary bytestring cmdargs containers crf-chain1 data-named + dawg directory filepath IntervalMap monad-ox mtl network polimorf + polysoup sgd tagsoup temporary text text-binary tokenize vector + ]; + description = "Nerf, a named entity recognition tool based on linear-chain CRFs"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -170870,25 +171012,12 @@ self: { ({ mkDerivation, base, bytestring, doctest }: mkDerivation { pname = "network-byte-order"; - version = "0.1.1.1"; - sha256 = "19cs6157amcc925vwr92q1azwwzkbam5g0k70i6qi80fhpikh37c"; - libraryHaskellDepends = [ base bytestring ]; - testHaskellDepends = [ base bytestring doctest ]; - description = "Network byte order utilities"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "network-byte-order_0_1_2_0" = callPackage - ({ mkDerivation, base, bytestring, doctest }: - mkDerivation { - pname = "network-byte-order"; version = "0.1.2.0"; sha256 = "1y2azf5zbydzvi4b0hxmy7am4kgpkq8ajnsbrpfrqz87b5y87ccy"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ base bytestring doctest ]; description = "Network byte order utilities"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "network-bytestring" = callPackage @@ -172259,8 +172388,8 @@ self: { }: mkDerivation { pname = "ngx-export-tools-extra"; - version = "0.1.0.0"; - sha256 = "0j3bfrmic9zrivsnaf4kzf5bf0inianmnn7v0c21s5ip775k5jy8"; + version = "0.1.0.1"; + sha256 = "0f55j4742rimq7jawgk0ca5kcxg9nz0lfpip5p3sw03w3g52xqxh"; libraryHaskellDepends = [ aeson base bytestring containers enclosed-exceptions http-client ngx-export-tools snap-core snap-server template-haskell text time @@ -172490,8 +172619,8 @@ self: { }: mkDerivation { pname = "niv"; - version = "0.2.3"; - sha256 = "182miqhcndb3fqxdcjnhpphma89pxdnbv8k3scrhzjd893ncxv8i"; + version = "0.2.8"; + sha256 = "0nggarlbfc8x5y7rp8n5fdzy3xipykxq4fk6irz1jsz4m6fbi9a4"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -172811,7 +172940,7 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {g = null; inherit (pkgs) glib; libnm-glib = null; + }) {g = null; inherit (pkgs) glib; libnm-glib = null; nm-glib = null;}; "nme" = callPackage @@ -173269,15 +173398,15 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "nonempty-containers_0_3_2_0" = callPackage + "nonempty-containers_0_3_3_0" = callPackage ({ mkDerivation, base, comonad, containers, deepseq, hedgehog , hedgehog-fn, nonempty-vector, semigroupoids, tasty , tasty-hedgehog, text, these, vector }: mkDerivation { pname = "nonempty-containers"; - version = "0.3.2.0"; - sha256 = "0h0djvjhlrm4s79q881gbag4kkabacvj0d5x0dc0xvhg1i0hs9da"; + version = "0.3.3.0"; + sha256 = "11mrv2vzdqxjx3xn93zlwfxh7z2d5ca5cbsr25y4zv34brn114g2"; libraryHaskellDepends = [ base comonad containers deepseq nonempty-vector semigroupoids these vector @@ -175108,8 +175237,8 @@ self: { license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; - inherit (pkgs.xorg) libXinerama; ovr = null; + }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; + inherit (pkgs.xorg) libXinerama; ovr = null; inherit (pkgs) systemd;}; "odbc" = callPackage @@ -175763,6 +175892,18 @@ self: { license = stdenv.lib.licenses.gpl2; }) {}; + "op" = callPackage + ({ mkDerivation, base, containers, doctest }: + mkDerivation { + pname = "op"; + version = "0.3.0.0"; + sha256 = "0as0nswa28mbw7qp1p1pjvvr4iv6zd81rka9g51fy2w52260lmpv"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base containers doctest ]; + description = "Common operators encouraging large-scale easy reading"; + license = stdenv.lib.licenses.asl20; + }) {}; + "opaleye" = callPackage ({ mkDerivation, aeson, base, base16-bytestring, bytestring , case-insensitive, containers, contravariant, dotenv, hspec @@ -178453,6 +178594,25 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "pagure-cli" = callPackage + ({ mkDerivation, base, bytestring, http-client, http-client-tls + , microlens, microlens-aeson, optparse-applicative, simple-cmd-args + , text + }: + mkDerivation { + pname = "pagure-cli"; + version = "0.1"; + sha256 = "092frs6240wf4nyqdkhny3jkd4v7gjmnd5gwxv9vlprimszns1vi"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ + base bytestring http-client http-client-tls microlens + microlens-aeson optparse-applicative simple-cmd-args text + ]; + description = "Pagure client"; + license = stdenv.lib.licenses.gpl2; + }) {}; + "pagure-hook-receiver" = callPackage ({ mkDerivation, base, containers, scotty, shelly, text , transformers, unix @@ -178663,25 +178823,25 @@ self: { maintainers = with stdenv.lib.maintainers; [ peti ]; }) {}; - "pandoc_2_8_0_1" = callPackage + "pandoc_2_9" = callPackage ({ mkDerivation, aeson, aeson-pretty, attoparsec, base , base64-bytestring, binary, blaze-html, blaze-markup, bytestring , case-insensitive, cmark-gfm, containers, criterion, data-default - , deepseq, Diff, directory, doclayout, doctemplates, exceptions - , executable-path, filepath, Glob, haddock-library, hslua - , hslua-module-system, hslua-module-text, HsYAML, HTTP, http-client - , http-client-tls, http-types, ipynb, JuicyPixels, mtl, network - , network-uri, pandoc-types, parsec, process, QuickCheck, random - , safe, scientific, SHA, skylighting, skylighting-core, split, syb - , tagsoup, tasty, tasty-golden, tasty-hunit, tasty-lua + , deepseq, Diff, directory, doclayout, doctemplates, emojis + , exceptions, executable-path, filepath, Glob, haddock-library + , hslua, hslua-module-system, hslua-module-text, HsYAML, HTTP + , http-client, http-client-tls, http-types, ipynb, JuicyPixels, mtl + , network, network-uri, pandoc-types, parsec, process, QuickCheck + , random, safe, scientific, SHA, skylighting, skylighting-core + , split, syb, tagsoup, tasty, tasty-golden, tasty-hunit, tasty-lua , tasty-quickcheck, temporary, texmath, text, text-conversions , time, unicode-transforms, unix, unordered-containers, vector , weigh, xml, zip-archive, zlib }: mkDerivation { pname = "pandoc"; - version = "2.8.0.1"; - sha256 = "0g8sg52319id1srfb7z9j85lsk84x2rbillrcl4qsjg81lgq7pzs"; + version = "2.9"; + sha256 = "1j4n7r4rh22ba4m4h3psy2jm3cxfd6pxlbpw0z613z01g30mr90c"; configureFlags = [ "-fhttps" "-f-trypandoc" ]; isLibrary = true; isExecutable = true; @@ -178690,13 +178850,13 @@ self: { aeson aeson-pretty attoparsec base base64-bytestring binary blaze-html blaze-markup bytestring case-insensitive cmark-gfm containers data-default deepseq directory doclayout doctemplates - exceptions filepath Glob haddock-library hslua hslua-module-system - hslua-module-text HsYAML HTTP http-client http-client-tls - http-types ipynb JuicyPixels mtl network network-uri pandoc-types - parsec process random safe scientific SHA skylighting - skylighting-core split syb tagsoup temporary texmath text - text-conversions time unicode-transforms unix unordered-containers - vector xml zip-archive zlib + emojis exceptions filepath Glob haddock-library hslua + hslua-module-system hslua-module-text HsYAML HTTP http-client + http-client-tls http-types ipynb JuicyPixels mtl network + network-uri pandoc-types parsec process random safe scientific SHA + skylighting skylighting-core split syb tagsoup temporary texmath + text text-conversions time unicode-transforms unix + unordered-containers vector xml zip-archive zlib ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ @@ -178754,7 +178914,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "pandoc-citeproc_0_16_4" = callPackage + "pandoc-citeproc_0_16_4_1" = callPackage ({ mkDerivation, aeson, aeson-pretty, attoparsec, base, bytestring , Cabal, containers, data-default, directory, filepath, hs-bibutils , HsYAML, HsYAML-aeson, libyaml, mtl, network, old-locale, pandoc @@ -178764,8 +178924,8 @@ self: { }: mkDerivation { pname = "pandoc-citeproc"; - version = "0.16.4"; - sha256 = "0mnkhyj56pw8cnycf4ny082rz67gii1x6clzhmxi60zafg07v04c"; + version = "0.16.4.1"; + sha256 = "1jbd6g82sn3546kimm0p6n7spfqr3b4dssjkr5v679jwb5w6hwmx"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -178818,8 +178978,8 @@ self: { }: mkDerivation { pname = "pandoc-crossref"; - version = "0.3.5.0"; - sha256 = "1x01qf7v88f42p6h4mjm8rllxm8jl7bj8rq3512qjksns6qajvk4"; + version = "0.3.6.0"; + sha256 = "0k1wvkjhlwgr8njsrjiivzyb1pbi17y6nxky4pb5wkkg57fd5847"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -179108,7 +179268,7 @@ self: { broken = true; }) {}; - "pandoc-pyplot_2_3_0_0" = callPackage + "pandoc-pyplot_2_3_0_1" = callPackage ({ mkDerivation, base, containers, data-default-class, deepseq , directory, filepath, hashable, hspec, hspec-expectations, mtl , open-browser, optparse-applicative, pandoc, pandoc-types @@ -179117,8 +179277,8 @@ self: { }: mkDerivation { pname = "pandoc-pyplot"; - version = "2.3.0.0"; - sha256 = "04brh01arvmp3v8b006933n55m6z1pvz9v3x58732n693s7bhq8n"; + version = "2.3.0.1"; + sha256 = "0jpf1fvn3qqaw7094sa79k12v7a7nbqcr6cambl6jr0mk307zm0a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -179135,7 +179295,7 @@ self: { mtl pandoc-types tasty tasty-hspec tasty-hunit temporary text ]; description = "A Pandoc filter to include figures generated from Python code blocks"; - license = stdenv.lib.licenses.mit; + license = stdenv.lib.licenses.gpl2; hydraPlatforms = stdenv.lib.platforms.none; broken = true; }) {}; @@ -183212,6 +183372,8 @@ self: { pname = "persistent-iproute"; version = "0.2.3"; sha256 = "1amzxmwispqi29ln50mfj43i1srl53n5iz7lsq8rxhd1x8fa35gm"; + revision = "1"; + editedCabalFile = "1jly9db968q5j5ly75f77hwxrhky3s6xx8ydgsjn5cdr9rc4iz8k"; libraryHaskellDepends = [ aeson aeson-iproute base bytestring http-api-data iproute path-pieces persistent text @@ -183220,6 +183382,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "persistent-iproute_0_2_4" = callPackage + ({ mkDerivation, aeson, aeson-iproute, base, bytestring + , http-api-data, iproute, path-pieces, persistent, text + }: + mkDerivation { + pname = "persistent-iproute"; + version = "0.2.4"; + sha256 = "1lsprnlgcnj8v38cnbgf2vpj9ivgsvgi3yy3nh1gmvyj7maznkq5"; + libraryHaskellDepends = [ + aeson aeson-iproute base bytestring http-api-data iproute + path-pieces persistent text + ]; + description = "Persistent instances for types in iproute"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "persistent-map" = callPackage ({ mkDerivation, base, binary, containers, directory, EdisonAPI , EdisonCore, filepath, LRU, mtl, stm-io-hooks @@ -185202,8 +185381,8 @@ self: { }: mkDerivation { pname = "pipes"; - version = "4.3.12"; - sha256 = "0ni5szs9jl4map05lcyl97dgb69g2xk1a1rdiw8p4024vfyskp8c"; + version = "4.3.13"; + sha256 = "1ch3xr5f5if0psd3lsyrpkwrgh36synnzqcpimghprys68l4zfkn"; libraryHaskellDepends = [ base exceptions mmorph mtl semigroups transformers void ]; @@ -187689,15 +187868,13 @@ self: { }) {}; "polimorf" = callPackage - ({ mkDerivation, base, binary, containers, text, text-binary }: + ({ mkDerivation, base, binary, containers, text }: mkDerivation { pname = "polimorf"; - version = "0.7.3"; - sha256 = "0vv7j1l0wnjwpd3hpxswq0k33izl0ck2njspcga885bkrd45lzdr"; - libraryHaskellDepends = [ - base binary containers text text-binary - ]; - description = "Working with the PoliMorf dictionary"; + version = "0.7.4"; + sha256 = "0pdz9fwqdwhqm1l81jnji3nm8y51dmfg5i84ggp8gmqfsiczvbj3"; + libraryHaskellDepends = [ base binary containers text ]; + description = "Handling the PoliMorf dictionary"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -187723,6 +187900,8 @@ self: { pname = "poly"; version = "0.3.1.0"; sha256 = "1c8xnkqxwzbpx01clz9spz9zwa18qhsbvscrc381r0f46cjax2ph"; + revision = "1"; + editedCabalFile = "10lcg7x6vzrzgj5libfwnmxj2y3f1j5gpz9l8mgzivapknvhhpfx"; libraryHaskellDepends = [ base primitive semirings vector vector-algorithms ]; @@ -187733,6 +187912,8 @@ self: { benchmarkHaskellDepends = [ base gauge semirings vector ]; description = "Polynomials"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; }) {}; "poly_0_3_3_0" = callPackage @@ -187744,6 +187925,8 @@ self: { pname = "poly"; version = "0.3.3.0"; sha256 = "1hj77nzyfipsycy77h8ccsx4iyy47ljjv0j8ckihxhaq36g0fpan"; + revision = "1"; + editedCabalFile = "0iv4363iq22hkwrkgsijgv8ykvj26q895rsbzrrzkydblf4psra9"; libraryHaskellDepends = [ base deepseq primitive semirings vector vector-algorithms ]; @@ -187755,6 +187938,7 @@ self: { description = "Polynomials"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; + broken = true; }) {}; "poly-arity" = callPackage @@ -188448,7 +188632,7 @@ self: { license = stdenv.lib.licenses.gpl2; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) gdk-pixbuf; inherit (pkgs) gtk2; + }) {inherit (pkgs) gdk-pixbuf; inherit (pkgs) gtk2; inherit (pkgs) pango; inherit (pkgs) poppler;}; "populate-setup-exe-cache" = callPackage @@ -189086,35 +189270,6 @@ self: { }: mkDerivation { pname = "postgresql-binary"; - version = "0.12.1.3"; - sha256 = "0y2irx1fw0xqs77qpaa3lk06r2q7j7wzbzriyc274h6lmn85sjdw"; - libraryHaskellDepends = [ - aeson base base-prelude binary-parser bytestring - bytestring-strict-builder containers loch-th network-ip - placeholders scientific text time transformers unordered-containers - uuid vector - ]; - testHaskellDepends = [ - aeson conversion conversion-bytestring conversion-text json-ast - loch-th network-ip placeholders postgresql-libpq QuickCheck - quickcheck-instances rerebase tasty tasty-hunit tasty-quickcheck - ]; - benchmarkHaskellDepends = [ criterion rerebase ]; - description = "Encoders and decoders for the PostgreSQL's binary format"; - license = stdenv.lib.licenses.mit; - }) {}; - - "postgresql-binary_0_12_2" = callPackage - ({ mkDerivation, aeson, base, base-prelude, binary-parser - , bytestring, bytestring-strict-builder, containers, conversion - , conversion-bytestring, conversion-text, criterion, json-ast - , loch-th, network-ip, placeholders, postgresql-libpq, QuickCheck - , quickcheck-instances, rerebase, scientific, tasty, tasty-hunit - , tasty-quickcheck, text, time, transformers, unordered-containers - , uuid, vector - }: - mkDerivation { - pname = "postgresql-binary"; version = "0.12.2"; sha256 = "1zkhwl8g141p1zgnbxjhh0r6wgvzlpwdbvyl80z31fdxd5v29bv8"; libraryHaskellDepends = [ @@ -189131,7 +189286,6 @@ self: { benchmarkHaskellDepends = [ criterion rerebase ]; description = "Encoders and decoders for the PostgreSQL's binary format"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "postgresql-common" = callPackage @@ -190946,6 +191100,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "pretty-hex_1_1" = callPackage + ({ mkDerivation, base, bytestring }: + mkDerivation { + pname = "pretty-hex"; + version = "1.1"; + sha256 = "0c8pa0rdb2q8rf4acy4gww0hj5lrzclzdh52yi2aiaaij4lqzir7"; + libraryHaskellDepends = [ base bytestring ]; + description = "A library for hex dumps of ByteStrings"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "pretty-loc" = callPackage ({ mkDerivation, base, text }: mkDerivation { @@ -191045,15 +191211,15 @@ self: { maintainers = with stdenv.lib.maintainers; [ cdepillabout ]; }) {}; - "pretty-simple_3_1_0_0" = callPackage + "pretty-simple_3_1_1_0" = callPackage ({ mkDerivation, ansi-terminal, base, Cabal, cabal-doctest , containers, criterion, doctest, Glob, mtl, QuickCheck , template-haskell, text, transformers }: mkDerivation { pname = "pretty-simple"; - version = "3.1.0.0"; - sha256 = "0p3p5i2rjwv19hzgqyarv7x6g6hvam159y50irvs0dd5wwphd2pa"; + version = "3.1.1.0"; + sha256 = "073x8jwnar4p7615dk0x92d76in2xwsgpip3w3hgq948c4ydmv58"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cabal-doctest ]; @@ -191500,10 +191666,8 @@ self: { }: mkDerivation { pname = "primitive-containers"; - version = "0.4.0"; - sha256 = "0ljb6np2yxnclqvz2sbpvjs027z701nsdhvmgy607am95sskxlrz"; - revision = "1"; - editedCabalFile = "18pxbfqjy2kfxgq1033bp3ci6xjj1ilnik2v5dzdcqlxr923zvkc"; + version = "0.4.1"; + sha256 = "1gi4fbxdhlzdyi9nnfmfyxl012hs5bam2kgvv8240mq5kxgimf06"; libraryHaskellDepends = [ base contiguous deepseq hashable primitive primitive-sort primitive-unlifted @@ -192458,8 +192622,8 @@ self: { ({ mkDerivation, base, comonad, profunctors }: mkDerivation { pname = "profunctor-arrows"; - version = "0.0.0.1"; - sha256 = "1zcka3xdg3zpy3bxafgipsxyj04jbywl2yf4x6qa13287lxwn6wm"; + version = "0.0.0.2"; + sha256 = "01ia949b45izrq6p8qvizz05kvy45qydwj5crdac9spad2asr1s3"; libraryHaskellDepends = [ base comonad profunctors ]; description = "Profunctor arrows"; license = stdenv.lib.licenses.bsd3; @@ -192505,21 +192669,22 @@ self: { }) {}; "profunctor-optics" = callPackage - ({ mkDerivation, adjunctions, base, bifunctors, comonad - , connections, contravariant, distributive, foldl, mtl - , profunctor-misc, profunctors, recursion-schemes, rings - , semigroupoids, unliftio-core + ({ mkDerivation, base, comonad, connections, containers + , distributive, doctest, ilist, mtl, newtype-generics + , profunctor-arrows, profunctors, rings, semigroupoids, tagged + , transformers, unliftio-core }: mkDerivation { pname = "profunctor-optics"; - version = "0.0.0.1"; - sha256 = "043cgxgdvz073mrc9bbpk8m35fy8qch33xya7v7s73sjijk6wcg6"; + version = "0.0.0.2"; + sha256 = "0xf7aikcbp1vgdd5bd4rf94w6iavwbxrxbr67prddqanv3jmjqn9"; libraryHaskellDepends = [ - adjunctions base bifunctors comonad connections contravariant - distributive foldl mtl profunctor-misc profunctors - recursion-schemes rings semigroupoids unliftio-core + base comonad connections containers distributive ilist mtl + newtype-generics profunctor-arrows profunctors rings semigroupoids + tagged transformers unliftio-core ]; - description = "Profunctor optics"; + testHaskellDepends = [ base containers doctest mtl ]; + description = "An optics library compatible with the typeclasses in 'profunctors'"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; broken = true; @@ -193742,8 +193907,8 @@ self: { }: mkDerivation { pname = "protocol-buffers"; - version = "2.4.12"; - sha256 = "0z1vkqdhj41bqnjhks4d82jby6l9j91k8ycna76bhv9p2w0gvp4g"; + version = "2.4.13"; + sha256 = "0xwfb2bkh4nd34s24q786ph4zyrnnl3bcry2kqx3sw20yk3zfdsc"; libraryHaskellDepends = [ aeson array base base16-bytestring binary bytestring containers directory filepath mtl parsec syb text utf8-string vector @@ -193756,8 +193921,8 @@ self: { ({ mkDerivation, base, bytestring, containers, protocol-buffers }: mkDerivation { pname = "protocol-buffers-descriptor"; - version = "2.4.12"; - sha256 = "0h4c1pgl51h7xrsm76mz6wd1l41ps93y3nvdl0p7mks9w7wlpccn"; + version = "2.4.13"; + sha256 = "1c3aiysjlk7r02l5902iq020iasiswk9c1mvf4f9h1yijba4x4fp"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring containers protocol-buffers @@ -195680,7 +195845,7 @@ self: { description = "Qt bindings"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {qtc_core = null; qtc_gui = null; qtc_network = null; + }) {qtc_core = null; qtc_gui = null; qtc_network = null; qtc_opengl = null; qtc_script = null; qtc_tools = null;}; "qtah-cpp-qt5" = callPackage @@ -197398,13 +197563,13 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "rainbow_0_34_2_0" = callPackage + "rainbow_0_34_2_2" = callPackage ({ mkDerivation, base, bytestring, lens, QuickCheck, terminfo, text }: mkDerivation { pname = "rainbow"; - version = "0.34.2.0"; - sha256 = "1lamwlkq3g184h7ab2f03x8bhmmpmcn0f1piqp8zqn0594v76a0q"; + version = "0.34.2.2"; + sha256 = "1rx5kci69m7fdi94x35a2wg88fprlix61mvzsqq3waqb7ahc2mlf"; libraryHaskellDepends = [ base bytestring lens terminfo text ]; testHaskellDepends = [ base bytestring lens QuickCheck terminfo text @@ -197450,14 +197615,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "rainbox_0_24_2_0" = callPackage + "rainbox_0_24_4_0" = callPackage ({ mkDerivation, base, bytestring, containers, lens, QuickCheck , rainbow, tasty, tasty-quickcheck, text }: mkDerivation { pname = "rainbox"; - version = "0.24.2.0"; - sha256 = "1b1nkw7j24fcmgzkcn92j6c8v6abrhg9580hnwna1b4sjjx6ayak"; + version = "0.24.4.0"; + sha256 = "13532qzpvlq976049bdfyqzhb4g843ij3b7w654xqb2ng9q4inwz"; libraryHaskellDepends = [ base bytestring containers lens rainbow text ]; @@ -197557,6 +197722,45 @@ self: { broken = true; }) {}; + "ral" = callPackage + ({ mkDerivation, adjunctions, base, bin, criterion, deepseq + , distributive, fin, hashable, QuickCheck, semigroupoids, vector + }: + mkDerivation { + pname = "ral"; + version = "0.1"; + sha256 = "0h8jqaapagrp9faixq817lib8l4nq4ycjj6ppl1ra8llnfsz5304"; + libraryHaskellDepends = [ + adjunctions base bin deepseq distributive fin hashable QuickCheck + semigroupoids + ]; + benchmarkHaskellDepends = [ base criterion vector ]; + description = "Random access lists"; + license = stdenv.lib.licenses.gpl2Plus; + }) {}; + + "ral-lens" = callPackage + ({ mkDerivation, base, bin, fin, lens, ral }: + mkDerivation { + pname = "ral-lens"; + version = "0.1"; + sha256 = "0hm8mzj51hdql8rp3v0yvmcvmgha4ys8zsgbbx93mlp2b4rfhzpv"; + libraryHaskellDepends = [ base bin fin lens ral ]; + description = "Length-indexed random access lists: lens utilities"; + license = stdenv.lib.licenses.gpl2Plus; + }) {}; + + "ral-optics" = callPackage + ({ mkDerivation, base, bin, fin, optics-core, ral }: + mkDerivation { + pname = "ral-optics"; + version = "0.1"; + sha256 = "0sky2zbh6wn4xlfc6sbrx7lvvy01qv69j80k0n4w9fyrq9ammb3r"; + libraryHaskellDepends = [ base bin fin optics-core ral ]; + description = "Length-indexed random access lists: optics utilities"; + license = stdenv.lib.licenses.gpl2Plus; + }) {}; + "ralist" = callPackage ({ mkDerivation, base, criterion, deepseq, hspec }: mkDerivation { @@ -197799,16 +198003,16 @@ self: { }) {}; "random-fu" = callPackage - ({ mkDerivation, base, erf, log-domain, math-functions, monad-loops - , mtl, random-shuffle, random-source, rvar, syb, template-haskell + ({ mkDerivation, base, erf, math-functions, monad-loops, mtl + , random-shuffle, random-source, rvar, syb, template-haskell , transformers, vector }: mkDerivation { pname = "random-fu"; - version = "0.2.7.0"; - sha256 = "1i5hg74gv6885vnhmyknydhsyrps2h5zjiq4dv992jg3xnrs9cxn"; + version = "0.2.7.3"; + sha256 = "071b3gi88kmrfiy6kyz1x67mqljwqb4l45vzg1rc2zig3iwy66ih"; libraryHaskellDepends = [ - base erf log-domain math-functions monad-loops mtl random-shuffle + base erf math-functions monad-loops mtl random-shuffle random-source rvar syb template-haskell transformers vector ]; description = "Random number generation"; @@ -199892,8 +200096,8 @@ self: { }: mkDerivation { pname = "record-dot-preprocessor"; - version = "0.2.1"; - sha256 = "1l6s793l4xxmm7x6zxinvfi19wdnhvklv7lp15gk0mw43ddmpbv5"; + version = "0.2.2"; + sha256 = "1rxa8dzh0ga9xrlwrwzf5lm9miql9lkmcyiy0nrc3s5lkxdsppww"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base extra ghc uniplate ]; @@ -201029,6 +201233,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "reflex-libtelnet" = callPackage + ({ mkDerivation, base, bytestring, data-default, dependent-map + , dependent-sum, dependent-sum-template, lens, libtelnet, reflex + }: + mkDerivation { + pname = "reflex-libtelnet"; + version = "0.1.0.0"; + sha256 = "0abqbbbzgsq2sz1yx9cjl7cjfjaygcv4vc8hp6g4gk7744xdshz3"; + libraryHaskellDepends = [ + base bytestring data-default dependent-map dependent-sum + dependent-sum-template lens libtelnet reflex + ]; + description = "Reflex bindings for libtelnet"; + license = stdenv.lib.licenses.gpl3Plus; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "reflex-orphans" = callPackage ({ mkDerivation, base, deepseq, dependent-map, mtl, ref-tf, reflex , tasty, tasty-hunit, these @@ -201169,8 +201391,8 @@ self: { ({ mkDerivation, base, hsp, hsx2hs, reform, text }: mkDerivation { pname = "reform-hsp"; - version = "0.2.7.1"; - sha256 = "084d03inyplx3n2zykaz2g7gskzs9hcjq8klhlnzpb1b6ahx5va8"; + version = "0.2.7.2"; + sha256 = "1vjbj41yl158h59wcx190jb4s627bhrhcbp21ykn93n4j454kfns"; libraryHaskellDepends = [ base hsp hsx2hs reform text ]; description = "Add support for using HSP with Reform"; license = stdenv.lib.licenses.bsd3; @@ -202543,8 +202765,8 @@ self: { }: mkDerivation { pname = "releaser"; - version = "0.2.0.0"; - sha256 = "1hh4z87rc11pgapbrz0sjcy21pvgnm201b85prn09kiwcqrawz8r"; + version = "0.2.1.0"; + sha256 = "1nmbqilik3zdcyi7b5hq7xrk1f62g6lw0i8014zxqz56lcwkaj4z"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -205065,21 +205287,21 @@ self: { }) {}; "rib" = callPackage - ({ mkDerivation, aeson, async, base, binary, bytestring, clay - , cmdargs, containers, data-default, directory, fsnotify - , http-types, lens, lens-aeson, lucid, mtl, pandoc - , pandoc-include-code, pandoc-types, safe, shake, skylighting, text - , time, wai, wai-app-static, wai-extra, warp + ({ mkDerivation, aeson, async, base-noprelude, binary, clay + , cmdargs, containers, directory, exceptions, foldl, fsnotify + , lucid, megaparsec, mmark, mmark-ext, modern-uri, mtl, named + , pandoc, pandoc-include-code, pandoc-types, path, path-io, relude + , shake, text, wai, wai-app-static, warp }: mkDerivation { pname = "rib"; - version = "0.4.1.0"; - sha256 = "06rxf3fnj9csng69p815ff3wlrbh48wszjcdm7v2xg6vbild3xkg"; + version = "0.5.0.0"; + sha256 = "1h9faqwicvgkw5lfj14mcmk0sn8fjzv1vl9887s4y4q4jpi2wfvb"; libraryHaskellDepends = [ - aeson async base binary bytestring clay cmdargs containers - data-default directory fsnotify http-types lens lens-aeson lucid - mtl pandoc pandoc-include-code pandoc-types safe shake skylighting - text time wai wai-app-static wai-extra warp + aeson async base-noprelude binary clay cmdargs containers directory + exceptions foldl fsnotify lucid megaparsec mmark mmark-ext + modern-uri mtl named pandoc pandoc-include-code pandoc-types path + path-io relude shake text wai wai-app-static warp ]; description = "Static site generator using Shake"; license = stdenv.lib.licenses.bsd3; @@ -205345,15 +205567,15 @@ self: { }) {}; "rings" = callPackage - ({ mkDerivation, base, connections, containers, contravariant - , hedgehog, property, semigroupoids + ({ mkDerivation, base, connections, containers, hedgehog, property + , semigroupoids }: mkDerivation { pname = "rings"; - version = "0.0.2"; - sha256 = "1jw9wzwixzm970rgv5fbji74dajz8ii4pqngjpihp2g0x8wq1scx"; + version = "0.0.2.1"; + sha256 = "00aks4frrnp5wk97zgbg9f1bsj3wm7hppfwa8mwr77lfgvbsd1hn"; libraryHaskellDepends = [ - base connections containers contravariant property semigroupoids + base connections containers property semigroupoids ]; testHaskellDepends = [ base connections hedgehog property ]; description = "Rings, semirings, and dioids"; @@ -207522,8 +207744,10 @@ self: { ({ mkDerivation, base, deepseq, QuickCheck }: mkDerivation { pname = "safe"; - version = "0.3.17"; - sha256 = "0p3yaf5slvyz1cyy51jq64c5rlp8yzwim8iy2dlnk42if4gc9ibr"; + version = "0.3.18"; + sha256 = "1v8gxjlq5wz5adyrd8i3dax5hcxrqq0i54m85zpfwfzqibi5nxyp"; + revision = "1"; + editedCabalFile = "0zr1di94nbvs6848g1ng6azl7nwm7454kjig2c7gcf9sp4q7z8ba"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base deepseq QuickCheck ]; description = "Library of safe (exception free) functions"; @@ -208200,6 +208424,8 @@ self: { pname = "salak"; version = "0.3.5.3"; sha256 = "0k6z2vjxg6za6rfhx1xgjdck7ainnsbhrvzav2ngwpvy8li5g02b"; + revision = "1"; + editedCabalFile = "138c763crbfipcb9ss1lk3wx3482nm2v4zbm3k88h6jszxhmxvav"; libraryHaskellDepends = [ base bytestring containers data-default directory dlist exceptions filepath hashable heaps megaparsec mtl scientific text time @@ -208930,8 +209156,6 @@ self: { testSystemDepends = [ z3 ]; description = "SMT Based Verification: Symbolic Haskell theorem prover using SMT solving"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; }) {inherit (pkgs) z3;}; "sbv_8_5" = callPackage @@ -208964,7 +209188,6 @@ self: { description = "SMT Based Verification: Symbolic Haskell theorem prover using SMT solving"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - broken = true; }) {inherit (pkgs) z3;}; "sbvPlugin" = callPackage @@ -210517,8 +210740,8 @@ self: { ({ mkDerivation, base, pretty-simple, sdl2, text }: mkDerivation { pname = "sdl-try-drivers"; - version = "0.0.0.1"; - sha256 = "1zwcf6l2v3k8hi33ssij9a8x2wvlsp4lsa0x7qb9zaq4nbb8nsqj"; + version = "0.0.0.2"; + sha256 = "0456j3c6a76ph01cz0cdhgfqyyamrwh0y7v5f336kvh5cmsdyw57"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ base pretty-simple sdl2 text ]; @@ -211578,27 +211801,6 @@ self: { }: mkDerivation { pname = "semigroupoids"; - version = "5.3.3"; - sha256 = "016hc4imr9l4szs3p7f1aahvxr5wv4clvr3qzrm3nibssg5vrs61"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; - libraryHaskellDepends = [ - base base-orphans bifunctors comonad containers contravariant - distributive hashable tagged template-haskell transformers - transformers-compat unordered-containers - ]; - testHaskellDepends = [ base doctest ]; - description = "Semigroupoids: Category sans id"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "semigroupoids_5_3_4" = callPackage - ({ mkDerivation, base, base-orphans, bifunctors, Cabal - , cabal-doctest, comonad, containers, contravariant, distributive - , doctest, hashable, tagged, template-haskell, transformers - , transformers-compat, unordered-containers - }: - mkDerivation { - pname = "semigroupoids"; version = "5.3.4"; sha256 = "0r49qpbi803jk3v4i09jr1a98l6hcgnjhrv1a9fhmay3ff4y9lh0"; setupHaskellDepends = [ base Cabal cabal-doctest ]; @@ -211610,7 +211812,6 @@ self: { testHaskellDepends = [ base doctest ]; description = "Semigroupoids: Category sans id"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "semigroupoids-syntax" = callPackage @@ -212603,8 +212804,8 @@ self: { pname = "servant-auth"; version = "0.3.2.0"; sha256 = "12s1m7vqp0ka8nani4cnrb6fad2y5mxji95bba2b6b07ih8xbd3v"; - revision = "1"; - editedCabalFile = "10ss4v45lclf5n0k6rch22zzs59v7p5ppd04dbc97pqxiygpbnd9"; + revision = "2"; + editedCabalFile = "06jpxqz5444k19p1n4i4yf2pvql37w9ngssp1grxl42dxk2bcg94"; libraryHaskellDepends = [ base ]; description = "Authentication combinators for servant"; license = stdenv.lib.licenses.bsd3; @@ -212621,8 +212822,8 @@ self: { pname = "servant-auth-client"; version = "0.4.0.0"; sha256 = "1kh4kq3cc9fn49vmh304zyzn7idb4k1j0803yp7a6qc733panf9g"; - revision = "1"; - editedCabalFile = "0cynalya2y5bfnhkc49vwf0ldxg4km6nklk77nlxjcrvwas21g7z"; + revision = "2"; + editedCabalFile = "0c67m1ckksnmwkya78nn9hy65xb7c4023fy7d3pp6zyq8izrp1v8"; libraryHaskellDepends = [ base bytestring containers servant servant-auth servant-client-core ]; @@ -212677,8 +212878,8 @@ self: { pname = "servant-auth-docs"; version = "0.2.10.0"; sha256 = "0j1ynnrb6plrhpb2vzs2p7a9jb41llp0j1jwgap7hjhkwhyc7wxd"; - revision = "3"; - editedCabalFile = "0in6rhgwn5idc2rsl4zbh6kkhxq471iczjd3i6ap60xg46ciymga"; + revision = "4"; + editedCabalFile = "1dvwkaihrm7dc2zdrqqvc0j7zmij487klrmsggsdiid7y68nyrqh"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base lens servant servant-auth servant-docs text @@ -212767,8 +212968,8 @@ self: { pname = "servant-auth-swagger"; version = "0.2.10.0"; sha256 = "04ndbbhdmpgb8yshki6q2j46a5q8fzvlb4nn8x8gv0mqkriq79sh"; - revision = "2"; - editedCabalFile = "1vr0qss87gi6r9z876v9vnmfhr4m58n5x44fgzpmjkn7wlh1i6m7"; + revision = "3"; + editedCabalFile = "087faa5bg2hlxyhg7jzy2jj4fzs3dkp0znsbabrharcvdlkpqj1r"; libraryHaskellDepends = [ base lens servant servant-auth servant-swagger swagger2 text ]; @@ -217862,6 +218063,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "simple-cmd_0_2_1" = callPackage + ({ mkDerivation, base, directory, filepath, process, unix }: + mkDerivation { + pname = "simple-cmd"; + version = "0.2.1"; + sha256 = "1b35hsxr63n3nbpjdf7ailsmp4yk6k8nscx8xxv453v0r3v89hss"; + libraryHaskellDepends = [ base directory filepath process unix ]; + description = "Simple String-based process commands"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "simple-cmd-args" = callPackage ({ mkDerivation, base, optparse-applicative }: mkDerivation { @@ -220367,28 +220580,27 @@ self: { }) {}; "smcdel" = callPackage - ({ mkDerivation, alex, ansi-terminal, array, base, containers - , criterion, cudd, directory, file-embed, filepath, graphviz, happy - , HasCacBDD, hspec, js-jquery, lens, process, QuickCheck, scotty - , tagged, template-haskell, temporary, text, time + ({ mkDerivation, ansi-terminal, array, base, containers, criterion + , cudd, directory, file-embed, filepath, graphviz, HasCacBDD, hspec + , js-jquery, process, QuickCheck, scotty, tagged, template-haskell + , temporary, text, time }: mkDerivation { pname = "smcdel"; - version = "1.0.0"; - sha256 = "1yi2qw76i9cch1flnqd7gsradkm2gr31i8595rwf11xgvj3r3s3f"; + version = "1.1.0"; + sha256 = "0dz1hbhf3y57cn4hh5s2fscnpw7zjnrl2hl644xl81vbpl1zbzyn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - array base containers cudd graphviz HasCacBDD lens process - QuickCheck tagged temporary text time + array base containers cudd graphviz HasCacBDD process QuickCheck + tagged temporary text time ]; executableHaskellDepends = [ ansi-terminal base directory file-embed filepath HasCacBDD js-jquery process scotty template-haskell text ]; - executableToolDepends = [ alex happy ]; testHaskellDepends = [ base containers hspec QuickCheck ]; - benchmarkHaskellDepends = [ base containers criterion time ]; + benchmarkHaskellDepends = [ base criterion time ]; description = "Symbolic Model Checking for Dynamic Epistemic Logic"; license = stdenv.lib.licenses.gpl2; hydraPlatforms = stdenv.lib.platforms.none; @@ -223244,8 +223456,8 @@ self: { }: mkDerivation { pname = "spacecookie"; - version = "0.2.1.0"; - sha256 = "0a8zsywkmbw7rj4iin72l2zcbyzjb0yhpmz6bv226cn0x44iy1nc"; + version = "0.2.1.1"; + sha256 = "0l3knzsqab58yyk6kafpxxh465ncgqr2gi388k89gxwrlcqkl8wr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -223258,8 +223470,6 @@ self: { ]; description = "Gopher Library and Server Daemon"; license = stdenv.lib.licenses.gpl3; - hydraPlatforms = stdenv.lib.platforms.none; - broken = true; }) {}; "spacefill" = callPackage @@ -225640,6 +225850,24 @@ self: { broken = true; }) {}; + "stack-wrapper" = callPackage + ({ mkDerivation, base, filepath, process }: + mkDerivation { + pname = "stack-wrapper"; + version = "0.1.0"; + sha256 = "002id9nd6lsg3hyy93ylj9x1jjdwrg2xhahsnp6m1igxq2yns0xr"; + revision = "1"; + editedCabalFile = "0biz4w2xrfj0bsb6xj0sjlrs567zvd207f1bkh7c265ip47gfhni"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base filepath process ]; + executableHaskellDepends = [ base filepath process ]; + description = "Call ghc within stack by calling ghc"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "stack-yaml" = callPackage ({ mkDerivation, base, bytestring, directory, doctest, filepath , Glob, text, yaml @@ -225657,18 +225885,25 @@ self: { }) {}; "stack2cabal" = callPackage - ({ mkDerivation, base, bytestring, Cabal, directory, extra - , filepath, hpack, stackage-to-hackage, text + ({ mkDerivation, base, bytestring, Cabal, containers, directory + , extra, filepath, hpack, HsYAML, http-client, http-client-tls + , text }: mkDerivation { pname = "stack2cabal"; - version = "1.0.3"; - sha256 = "1bmghzb866p3225ai3w4xxy3s2qic3vr4srcx7xb113qjvmadran"; - isLibrary = false; + version = "1.0.5"; + sha256 = "15swq7rv997fh1qka7ga5hc90gc889xzkx61910jz3an6sy5zx0p"; + revision = "1"; + editedCabalFile = "15qc686alcfbxjpr7iyi2bxv801cmbkqvncpb6jd0879ll9lznrh"; + isLibrary = true; isExecutable = true; + libraryHaskellDepends = [ + base bytestring Cabal containers directory extra filepath hpack + HsYAML http-client http-client-tls text + ]; executableHaskellDepends = [ - base bytestring Cabal directory extra filepath hpack - stackage-to-hackage text + base bytestring Cabal containers directory extra filepath hpack + HsYAML http-client http-client-tls text ]; description = "Convert stack projects to cabal.project + cabal.project.freeze"; license = stdenv.lib.licenses.gpl3Plus; @@ -225972,6 +226207,8 @@ self: { pname = "stackage-to-hackage"; version = "1.1.1"; sha256 = "10zd3wqla54mfnwv65gklvmglhcpzhanqfka0l0ilnbkqlgx4acm"; + revision = "3"; + editedCabalFile = "07iflizm4w02w8samh5bcydd3jiqxhcwx2w5zylga8g1107cpaa3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -228740,6 +228977,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "streamly-fsnotify" = callPackage + ({ mkDerivation, base, fsnotify, paths, semirings, streamly, text + , time + }: + mkDerivation { + pname = "streamly-fsnotify"; + version = "1.0.0.1"; + sha256 = "0w81r0szdf4q8v6n389qlzwslhfwvjf0m9nihxsm1y0jgxbzy5cb"; + libraryHaskellDepends = [ + base fsnotify paths semirings streamly text time + ]; + description = "Folder watching as a Streamly stream"; + license = stdenv.lib.licenses.gpl3Plus; + }) {}; + "streamproc" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -230963,8 +231215,8 @@ self: { pname = "svg-builder"; version = "0.1.1"; sha256 = "1k420f497lzkymmxin88ql6ib8dziic43avykv31yq65rgrf7l2g"; - revision = "1"; - editedCabalFile = "1bhp9gvid2iis411k1vvyj5krzc4ahxcqcd9cwx9h37jxg180xw1"; + revision = "2"; + editedCabalFile = "100nmkgcm1ncv4mkr1xcsa7bb3z6zx0lfayk8innd4hm62xsvhj3"; libraryHaskellDepends = [ base blaze-builder bytestring hashable text unordered-containers ]; @@ -231427,8 +231679,8 @@ self: { }: mkDerivation { pname = "syb-with-class"; - version = "0.6.1.11"; - sha256 = "0fgmcxhrhcjcv5nmb5irp6mqcwknpk15azzd0qhajwx8mqpw6b8l"; + version = "0.6.1.12"; + sha256 = "1cxy0mph0kqdi3hzy5x3c754a3sjdn14x64ga4bkhvzi6iwbfcq0"; libraryHaskellDepends = [ array base bytestring containers template-haskell ]; @@ -231849,7 +232101,7 @@ self: { license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) gmp; inherit (pkgs) gmpxx; + }) {inherit (pkgs) gmp; inherit (pkgs) gmpxx; inherit (pkgs) symengine;}; "symengine-hs" = callPackage @@ -231869,7 +232121,7 @@ self: { license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; broken = true; - }) {inherit (pkgs) gmp; inherit (pkgs) gmpxx; + }) {inherit (pkgs) gmp; inherit (pkgs) gmpxx; inherit (pkgs) symengine;}; "symmetric-properties" = callPackage @@ -232358,8 +232610,8 @@ self: { }: mkDerivation { pname = "synthesizer-llvm"; - version = "0.8.2"; - sha256 = "0vf0p1ajs7k327cc1dwm6ja2qyby865g1bqc6mzrjn826dv2vric"; + version = "0.8.2.1"; + sha256 = "0bgla347pfdaai41rp9jny2k1hv0k1s8jdmqhd54v5c60cxl6p9l"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -233887,6 +234139,8 @@ self: { pname = "tar"; version = "0.5.1.1"; sha256 = "1ppim7cgmn7ng8zbdrwkxhhizc30h15h1c9cdlzamc5jcagl915k"; + revision = "1"; + editedCabalFile = "1ni8zym7k6f1hg6wfvnnf3xcs2ar3z8xaabkgjg8q329arjcm8wp"; libraryHaskellDepends = [ array base bytestring containers deepseq directory filepath time ]; @@ -234116,17 +234370,15 @@ self: { "taskwarrior" = callPackage ({ mkDerivation, aeson, base, bytestring, hspec, hspec-discover - , process, QuickCheck, quickcheck-instances, string-interpolate - , text, time, unordered-containers, uuid + , process, QuickCheck, quickcheck-instances, random + , string-interpolate, text, time, unordered-containers, uuid }: mkDerivation { pname = "taskwarrior"; - version = "0.1.0.0"; - sha256 = "0af58ns601bqih7nvg614wclxvd2f9j3rqakz9djjybdk1771j2v"; - revision = "3"; - editedCabalFile = "1b2v1rl2impngxn8bw9j36nr0id4s5dy6pnj0nw5p69mfb046zd5"; + version = "0.1.1.0"; + sha256 = "1vr25n4q4rb5z760dpd247h3z6r8ydqgg5z5hihmps1vhazvxa8c"; libraryHaskellDepends = [ - aeson base bytestring process string-interpolate text time + aeson base bytestring process random string-interpolate text time unordered-containers uuid ]; testHaskellDepends = [ @@ -234584,18 +234836,18 @@ self: { }) {}; "tasty-rerun" = callPackage - ({ mkDerivation, base, containers, mtl, optparse-applicative - , reducers, split, stm, tagged, tasty, transformers + ({ mkDerivation, base, containers, mtl, optparse-applicative, split + , stm, tagged, tasty, transformers }: mkDerivation { pname = "tasty-rerun"; - version = "1.1.14"; - sha256 = "0s0zj8ds4g1w2cjzm2lh25ivg962jigqdrbj08v3dbz64lx4mlzr"; + version = "1.1.15"; + sha256 = "008pwf3mqn18vxzxym6zbfm7kf4g415g3722r41vdbh972xkz3w2"; libraryHaskellDepends = [ - base containers mtl optparse-applicative reducers split stm tagged - tasty transformers + base containers mtl optparse-applicative split stm tagged tasty + transformers ]; - description = "Run tests by filtering the test tree depending on the result of previous test runs"; + description = "Rerun only tests which failed in a previous test run"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -235002,8 +235254,8 @@ self: { pname = "tdigest-Chart"; version = "0.2"; sha256 = "1ciq7d187as9sk1dpccm2s02b6jdhij1l477wff0a7labgw21l0l"; - revision = "1"; - editedCabalFile = "1095k2sgyjd5m38j1qxa1df9izzdpjl80lrsmwhjm1jw4lmk8cys"; + revision = "2"; + editedCabalFile = "07fg2pnj06vz2cwyxqyx40ghd0d7p9byazds7lhim4z397gngk0f"; libraryHaskellDepends = [ base base-compat Chart colour lens semigroupoids tdigest ]; @@ -236149,12 +236401,12 @@ self: { , hedgehog, inline-c, lens, mono-traversable, pcre2, pretty-simple , QuickCheck, singletons, tasty, tasty-hedgehog, tasty-hspec , template-haskell, text, transformers, vte_291, xml-conduit - , xml-html-qq + , xml-html-qq, yaml }: mkDerivation { pname = "termonad"; - version = "2.1.0.0"; - sha256 = "0acw3qkph2j5vxl1zw4g21z6xn3w8r6q0v6wpnavd3drzyvw6hyn"; + version = "3.0.0.0"; + sha256 = "11c58k6iyqry5dfdbxsvmca19w10igb4yd1nk2ap6h7zsav2rjgn"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -236165,6 +236417,7 @@ self: { focuslist gi-gdk gi-gio gi-glib gi-gtk gi-pango gi-vte haskell-gi-base inline-c lens mono-traversable pretty-simple QuickCheck singletons text transformers xml-conduit xml-html-qq + yaml ]; libraryPkgconfigDepends = [ gtk3 pcre2 vte_291 ]; executableHaskellDepends = [ base ]; @@ -236175,7 +236428,7 @@ self: { description = "Terminal emulator configurable in Haskell"; license = stdenv.lib.licenses.bsd3; maintainers = with stdenv.lib.maintainers; [ cdepillabout ]; - }) {inherit (pkgs) gtk3; inherit (pkgs) pcre2; + }) {inherit (pkgs) gtk3; inherit (pkgs) pcre2; vte_291 = pkgs.vte;}; "termplot" = callPackage @@ -236253,6 +236506,29 @@ self: { broken = true; }) {}; + "tesla" = callPackage + ({ mkDerivation, aeson, base, bytestring, casing, containers + , generic-deriving, HUnit, lens, lens-aeson, mtl, tasty + , tasty-hunit, tasty-quickcheck, template-haskell, text, time + , vector, wreq + }: + mkDerivation { + pname = "tesla"; + version = "0.1.0.0"; + sha256 = "1asifxkc73n8g30qmr1nr83vpvgx8smi505322n9sknlb1hadgms"; + libraryHaskellDepends = [ + aeson base bytestring casing containers generic-deriving lens + lens-aeson mtl template-haskell text time vector wreq + ]; + testHaskellDepends = [ + aeson base bytestring casing containers generic-deriving HUnit lens + lens-aeson mtl tasty tasty-hunit tasty-quickcheck template-haskell + text time vector wreq + ]; + description = "Tesla API client"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "test-fixture" = callPackage ({ mkDerivation, base, data-default-class, exceptions , haskell-src-exts, haskell-src-meta, hspec, hspec-discover, mtl @@ -236961,8 +237237,8 @@ self: { pname = "texrunner"; version = "0.0.1.2"; sha256 = "1fxyxwgvn0rxhkl1fs2msr88jqwx5wwfnjsjlcankrwcn7gyk7jy"; - revision = "1"; - editedCabalFile = "137bbyxrrg9yn1060aqkamdk1mb7x12nwndradwp57057ix79fp4"; + revision = "2"; + editedCabalFile = "0zv8xp8z2gx9zjqn1f81hri4hn0bws7cq39g5i2g2axrkm9nwj5q"; libraryHaskellDepends = [ attoparsec base bytestring directory filepath io-streams mtl process semigroups temporary @@ -238403,8 +238679,8 @@ self: { }: mkDerivation { pname = "th-lift"; - version = "0.8.0.1"; - sha256 = "1a6qlbdg15cfr5rvl9g3blgwx4v1p0xic0pzv13zx165xbc36ld0"; + version = "0.8.1"; + sha256 = "1msyisgn30l2sd7jagab38r8q9mbi4phmqk4g3fddn4l6wcz989z"; libraryHaskellDepends = [ base ghc-prim template-haskell th-abstraction ]; @@ -239460,10 +239736,8 @@ self: { }: mkDerivation { pname = "tibetan-utils"; - version = "0.1.1.10"; - sha256 = "11bzcan2vfhdz6lwfvfgiyycqf30p4kdkzn47pm4ydr6bbpz8aia"; - revision = "1"; - editedCabalFile = "0gm271p3m3y0x9lfi5yviznqfr65f0if553z6h977dqk3f3psyfd"; + version = "0.1.2.0"; + sha256 = "1bw10jahy0s9ai6ryfdx58jzjib146x7kzqkg65z71brvm0cliza"; libraryHaskellDepends = [ base composition-prelude megaparsec text ]; @@ -241174,7 +241448,7 @@ self: { broken = true; }) {}; - "tmp-postgres_1_23_0_3" = callPackage + "tmp-postgres_1_31_0_1" = callPackage ({ mkDerivation, ansi-wl-pprint, async, base, base64-bytestring , bytestring, containers, criterion, cryptohash-sha1, deepseq , directory, generic-monoid, hspec, mtl, network, port-utils @@ -241183,8 +241457,8 @@ self: { }: mkDerivation { pname = "tmp-postgres"; - version = "1.23.0.3"; - sha256 = "1fjp6021lxz1a2drd1f9g3n7sxdrq17wgc2cbjiihcqrjld5qqs0"; + version = "1.31.0.1"; + sha256 = "0nlg0hi0rcfk77jm927i1w63mh4x9y1p4j3fqbd13c2a6pg084vw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -241203,7 +241477,7 @@ self: { unix ]; benchmarkHaskellDepends = [ - base criterion deepseq postgres-options postgresql-simple + base criterion deepseq postgres-options postgresql-simple temporary ]; description = "Start and stop a temporary postgres"; license = stdenv.lib.licenses.bsd3; @@ -242333,19 +242607,19 @@ self: { }) {}; "tptp" = callPackage - ({ mkDerivation, attoparsec, base, Cabal, directory, doctest, extra + ({ mkDerivation, attoparsec, base, Cabal, directory, extra , generic-random, prettyprinter, QuickCheck, scientific, text }: mkDerivation { pname = "tptp"; - version = "0.1.0.3"; - sha256 = "1h00g4263akyfgirvdw5ylbiskl3hhrx58jar59blj57k0i969wi"; + version = "0.1.1.0"; + sha256 = "0cwjl8531zzl9mmgp7hq9jr9i9m32yf2j016v2p6h3r93kysbhrf"; libraryHaskellDepends = [ attoparsec base prettyprinter scientific text ]; testHaskellDepends = [ - attoparsec base Cabal directory doctest extra generic-random - prettyprinter QuickCheck scientific text + attoparsec base Cabal directory extra generic-random prettyprinter + QuickCheck scientific text ]; description = "A parser and a pretty printer for the TPTP language"; license = stdenv.lib.licenses.gpl3; @@ -243383,8 +243657,8 @@ self: { }: mkDerivation { pname = "tree-sitter"; - version = "0.6.0.0"; - sha256 = "1kdx7axkx34h6jlmpzvmqbabyiqj3yp78bl1qn6aj5c2mql4hi12"; + version = "0.7.1.0"; + sha256 = "1xbgii27xn858373nly4q73y1ghrpv069pxjd5bc30rff611rqvz"; libraryHaskellDepends = [ aeson base bytestring containers directory filepath fused-effects semantic-source split template-haskell text unordered-containers @@ -243400,8 +243674,8 @@ self: { ({ mkDerivation, base, template-haskell, tree-sitter }: mkDerivation { pname = "tree-sitter-go"; - version = "0.2.0.1"; - sha256 = "1l1phqnsfsi47pqcjn84i8pqxfyslnrhw8an9g6fxx21gc6sdn45"; + version = "0.3.0.0"; + sha256 = "07r8dlx8r3g1sdc23w544clb658wiw5rjl33m967li5sq7g1w1aj"; libraryHaskellDepends = [ base template-haskell tree-sitter ]; doHaddock = false; description = "Tree-sitter grammar/parser for Go"; @@ -243433,8 +243707,8 @@ self: { }: mkDerivation { pname = "tree-sitter-java"; - version = "0.5.0.0"; - sha256 = "0rmmsp1alyvc94f61qfha5wm0z2605n9wz3yxaac58bqghsqjx8f"; + version = "0.6.0.0"; + sha256 = "1jz740pj2ihmkf06ixii93msfn40lh5mky3qc5bvwk5xqf4ai716"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base semantic-source template-haskell tree-sitter @@ -243454,8 +243728,8 @@ self: { ({ mkDerivation, base, template-haskell, text, tree-sitter }: mkDerivation { pname = "tree-sitter-json"; - version = "0.4.0.0"; - sha256 = "1syd5md8gwxhcfqwvfy4f3rilpn8fr83ib54wa3mmf7165jscwpz"; + version = "0.5.0.0"; + sha256 = "1mq1v81d00l80pg6mji9w1g464hxvgv28djnxany5vy2g38ns7q9"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base template-haskell text tree-sitter ]; doHaddock = false; @@ -243471,6 +243745,8 @@ self: { pname = "tree-sitter-php"; version = "0.2.0.1"; sha256 = "0dxszds10fr3zp1vjcj18b44mv6hmbzskmai14x03zgimxgwwaqm"; + revision = "1"; + editedCabalFile = "0k5qq7m0m3imgyhwyakrfjzxf5pjw6p7p3iwm01bj96ya8iy71ia"; libraryHaskellDepends = [ base template-haskell tree-sitter ]; doHaddock = false; description = "Tree-sitter grammar/parser for PHP"; @@ -243487,8 +243763,8 @@ self: { }: mkDerivation { pname = "tree-sitter-python"; - version = "0.7.0.0"; - sha256 = "0s86c4jbfp8dbkkqxdq9k28xphx5vrkf2ss1xzjq88bkzz6q7hqy"; + version = "0.8.0.0"; + sha256 = "08a698qqjck0nml11nrgyzvgrjbkanyvfv0x0bqng0w3mjk62yf0"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson base directory filepath semantic-source template-haskell @@ -243509,8 +243785,8 @@ self: { ({ mkDerivation, base, template-haskell, tree-sitter }: mkDerivation { pname = "tree-sitter-ruby"; - version = "0.2.0.1"; - sha256 = "1rk49pm93avr9fap8xim7zl26wms50q2f5x2yp9nq5w3mbm3j3sc"; + version = "0.3.1.0"; + sha256 = "0kndnmnhfff4d936irvsc545x3npxqspf21qwwqwn4c5n3ispv2p"; libraryHaskellDepends = [ base template-haskell tree-sitter ]; doHaddock = false; description = "Tree-sitter grammar/parser for Ruby"; @@ -243523,8 +243799,8 @@ self: { ({ mkDerivation, base, template-haskell, tree-sitter }: mkDerivation { pname = "tree-sitter-tsx"; - version = "0.2.1.1"; - sha256 = "1r4kr4c0vslw3j2hanzf8wifabfynz5brayd6kz1hpczg8icandm"; + version = "0.3.0.0"; + sha256 = "029dapll3jw4m0fxmbxn3nj4jgi8j777ajyc8zx8m2f12zly3y5i"; libraryHaskellDepends = [ base template-haskell tree-sitter ]; doHaddock = false; description = "Tree-sitter grammar/parser for TSX"; @@ -243537,8 +243813,8 @@ self: { ({ mkDerivation, base, template-haskell, tree-sitter }: mkDerivation { pname = "tree-sitter-typescript"; - version = "0.2.1.1"; - sha256 = "0i8vnc0afqnf8lnl8rmsax6b9pfx3s14s8q35f0h3ghpv9b38bs6"; + version = "0.3.0.0"; + sha256 = "0gkhbsmrjkf6q4bwlhws2zmnkhjval7qrbvqlcnmmvx384aiis72"; libraryHaskellDepends = [ base template-haskell tree-sitter ]; doHaddock = false; description = "Tree-sitter grammar/parser for TypeScript"; @@ -243551,8 +243827,8 @@ self: { ({ mkDerivation, base, containers, doctest, mtl }: mkDerivation { pname = "tree-traversals"; - version = "0.1.0.0"; - sha256 = "0wdy1p94096qdc00w8pmbz6qcawc0ivlhy0sg0b3jir0s2ksdccb"; + version = "0.1.1.0"; + sha256 = "0wsa4qxlxk6308smv957by8fmnsnsxnxxga8c66bvnhlr95rg9rk"; libraryHaskellDepends = [ base containers ]; testHaskellDepends = [ base containers doctest mtl ]; description = "Functions and newtype wrappers for traversing Trees"; @@ -244289,6 +244565,22 @@ self: { broken = true; }) {}; + "ttc" = callPackage + ({ mkDerivation, base, bytestring, tasty, tasty-hunit + , template-haskell, text + }: + mkDerivation { + pname = "ttc"; + version = "0.1.0.1"; + sha256 = "12c781fsa1i2iw03ysdh5fpg0912w9kmzgixzq16kb4mdb0crq30"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base bytestring template-haskell text ]; + testHaskellDepends = [ base bytestring tasty tasty-hunit text ]; + description = "Textual Type Classes"; + license = stdenv.lib.licenses.mit; + }) {}; + "ttl-hashtables" = callPackage ({ mkDerivation, base, clock, containers, data-default, failable , hashable, hashtables, hspec, mtl, transformers @@ -246254,6 +246546,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "typed-digits" = callPackage + ({ mkDerivation, base, doctest, Glob, hspec, hspec-discover, nats + , QuickCheck, singletons + }: + mkDerivation { + pname = "typed-digits"; + version = "0.1.0.0"; + sha256 = "1x2kyvz0bdcy9iqh0222386r4kbj2in7dpll9jn461v4v0s9bgvc"; + libraryHaskellDepends = [ base nats singletons ]; + testHaskellDepends = [ + base doctest Glob hspec hspec-discover QuickCheck + ]; + testToolDepends = [ hspec-discover ]; + description = "Digits, indexed by their base at the type level"; + license = stdenv.lib.licenses.mit; + }) {}; + "typed-duration" = callPackage ({ mkDerivation, base, lifted-base, monad-control , transformers-base @@ -246912,6 +247221,24 @@ self: { license = "(BSD-3-Clause OR Apache-2.0)"; }) {}; + "ucd" = callPackage + ({ mkDerivation, base, Cabal, containers, directory, gauge + , regex-applicative, util + }: + mkDerivation { + pname = "ucd"; + version = "0.0.1.3"; + sha256 = "1za494jgm3zml4ik203863kwni6pz5dsw6ssn06bjbyk7l7pbg33"; + setupHaskellDepends = [ + base Cabal containers directory regex-applicative util + ]; + libraryHaskellDepends = [ base util ]; + testHaskellDepends = [ base util ]; + benchmarkHaskellDepends = [ base gauge util ]; + description = "Unicode Character Database — Predicates on characters specified by Unicode"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "uconv" = callPackage ({ mkDerivation, base, icu }: mkDerivation { @@ -250118,8 +250445,8 @@ self: { ({ mkDerivation, base, transformers }: mkDerivation { pname = "util"; - version = "0.1.14.0"; - sha256 = "0z3zwn3990nx26xrvdaz9dmlr01477jjfiqcjk5h5qy9h0npc4jd"; + version = "0.1.14.1"; + sha256 = "17y07674dkhgq8yxrdfqj3ycaw5232rc1dnfh7r0v4ca2fyhx5a8"; libraryHaskellDepends = [ base transformers ]; description = "Utilities"; license = stdenv.lib.licenses.bsd3; @@ -250483,8 +250810,8 @@ self: { }: mkDerivation { pname = "uuid-orphans"; - version = "1.4.3"; - sha256 = "0bfjyc6dg0k7vrd0i1w7ijdld3ns46jdy3dhybh9r2k08kr7fkgy"; + version = "1.4.4"; + sha256 = "1qmlnzqdm9wrczlknw53y91yvdzfjbxs10szxvg9xaa4bj7gs5rw"; libraryHaskellDepends = [ base safecopy text th-lift uuid-types web-routes ]; @@ -251549,17 +251876,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "vec_0_2" = callPackage + "vec_0_3" = callPackage ({ mkDerivation, adjunctions, base, base-compat, criterion, deepseq - , distributive, fin, hashable, inspection-testing, lens + , distributive, fin, hashable, inspection-testing, QuickCheck , semigroupoids, tagged, transformers, vector }: mkDerivation { pname = "vec"; - version = "0.2"; - sha256 = "0jh3na9nvljvshzij3hca8g2gpbsrp253fqnqzpq4p8bkv8zkfj1"; + version = "0.3"; + sha256 = "0r2jk3jqwn0r4wnpgc8k8i664g3rrs6dkyfsysysn4w10j22j5sr"; libraryHaskellDepends = [ - adjunctions base base-compat deepseq distributive fin hashable lens + adjunctions base deepseq distributive fin hashable QuickCheck semigroupoids transformers ]; testHaskellDepends = [ @@ -251571,6 +251898,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "vec-lens" = callPackage + ({ mkDerivation, base, fin, lens, vec }: + mkDerivation { + pname = "vec-lens"; + version = "0.3"; + sha256 = "0i08p7rfmivf03mir7hcbkr7rarji95icsyvi6diclav1jd6fa7q"; + libraryHaskellDepends = [ base fin lens vec ]; + description = "Vec: length-indexed (sized) list: lens support"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "vec-optics" = callPackage + ({ mkDerivation, base, fin, optics-core, vec }: + mkDerivation { + pname = "vec-optics"; + version = "0.3"; + sha256 = "13g0j9hn27jfjlrm7c6bdsb2lhwrg016cal7hdic8azdxgdp8n0a"; + libraryHaskellDepends = [ base fin optics-core vec ]; + description = "Vec: length-indexed (sized) list: optics support"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "vect" = callPackage ({ mkDerivation, base, random }: mkDerivation { @@ -251662,27 +252011,8 @@ self: { }: mkDerivation { pname = "vector-algorithms"; - version = "0.8.0.1"; - sha256 = "1zip8r7hh5g12xrjvhbg38z6hfxy7l6h6pl88qcqc0ygdmwdxg0m"; - revision = "2"; - editedCabalFile = "0ms473xd1d81dbg47kjr9gxqs11ipg2j1kk99q37rhvrbr5xv5l4"; - libraryHaskellDepends = [ base bytestring primitive vector ]; - testHaskellDepends = [ - base bytestring containers QuickCheck vector - ]; - benchmarkHaskellDepends = [ base mwc-random vector ]; - description = "Efficient algorithms for vector arrays"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "vector-algorithms_0_8_0_2" = callPackage - ({ mkDerivation, base, bytestring, containers, mwc-random - , primitive, QuickCheck, vector - }: - mkDerivation { - pname = "vector-algorithms"; - version = "0.8.0.2"; - sha256 = "05jc15ckdmh4hbwmqax8jyahqslj7c03la1vgz5a5gw0hwspyq34"; + version = "0.8.0.3"; + sha256 = "11vks2h9f5gk0irsx5j9xwlicbzkv3k80sx76j5k3zb38q0izi0s"; libraryHaskellDepends = [ base bytestring primitive vector ]; testHaskellDepends = [ base bytestring containers QuickCheck vector @@ -251690,7 +252020,6 @@ self: { benchmarkHaskellDepends = [ base mwc-random vector ]; description = "Efficient algorithms for vector arrays"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "vector-binary" = callPackage @@ -252206,6 +252535,34 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "venzone" = callPackage + ({ mkDerivation, ansi-terminal-game, base, containers, directory + , file-embed, filepath, fsnotify, hspec, line-drawing, megaparsec + , microlens, microlens-platform, mtl, QuickCheck, utf8-light + }: + mkDerivation { + pname = "venzone"; + version = "1.0.0.4"; + sha256 = "1jqhv6xi0yn970h0wlzhlhrfwjr44drpwvys9kvfi4di7cg4pc74"; + isLibrary = false; + isExecutable = true; + enableSeparateDataOutput = true; + executableHaskellDepends = [ + ansi-terminal-game base containers directory file-embed filepath + fsnotify line-drawing megaparsec microlens microlens-platform mtl + utf8-light + ]; + testHaskellDepends = [ + ansi-terminal-game base containers directory file-embed filepath + hspec line-drawing megaparsec microlens microlens-platform mtl + QuickCheck utf8-light + ]; + description = "ASCII platform-adventure game"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + broken = true; + }) {}; + "verbalexpressions" = callPackage ({ mkDerivation, base, regex-pcre }: mkDerivation { @@ -257168,13 +257525,14 @@ self: { }) {}; "weigh" = callPackage - ({ mkDerivation, base, deepseq, mtl, process, split, temporary }: + ({ mkDerivation, base, deepseq, ghc, mtl, process, split, temporary + }: mkDerivation { pname = "weigh"; - version = "0.0.14"; - sha256 = "0l85marb5rl9nr1c0id42dnr5i9fk1jciy5h6lywhb34w3hbj61g"; + version = "0.0.16"; + sha256 = "13pbjr7fzqy3s9c1nd2jhfwzbpccmpfwdn7y46z9k2bfkch1jam9"; libraryHaskellDepends = [ - base deepseq mtl process split temporary + base deepseq ghc mtl process split temporary ]; testHaskellDepends = [ base deepseq ]; description = "Measure allocations of a Haskell functions/values"; @@ -259448,7 +259806,7 @@ self: { description = "wxHaskell C++ wrapper"; license = "unknown"; hydraPlatforms = stdenv.lib.platforms.none; - }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; + }) {inherit (pkgs) libGL; inherit (pkgs.xorg) libX11; inherit (pkgs) wxGTK;}; "wxcore" = callPackage @@ -259934,12 +260292,10 @@ self: { }: mkDerivation { pname = "xeno"; - version = "0.3.5.1"; - sha256 = "1bdvj5ql0q9i8vb3429d8kl3hyk45r37s23rm76mhwhazhqxcm60"; - revision = "1"; - editedCabalFile = "0d9w9x6lwhvshy4dbvd80ckb9p0g4vcmzy6kvwai9rqmszf89cnh"; + version = "0.3.5.2"; + sha256 = "0xfhdi5d0y3rlsmzczdg8b896l9q31nify1vsq0vfqqhfn75pw8l"; libraryHaskellDepends = [ - array base bytestring deepseq hspec mtl mutable-containers vector + array base bytestring deepseq mtl mutable-containers vector ]; testHaskellDepends = [ base bytestring hexml hspec ]; benchmarkHaskellDepends = [ @@ -261241,8 +261597,8 @@ self: { }: mkDerivation { pname = "xmobar"; - version = "0.31"; - sha256 = "1sbxva4zaj060bigmxivpn4zlz0q1qbq2np8gljdqkjvysjzpbka"; + version = "0.32"; + sha256 = "0x2ki3v0pmhl4bva3qi1xx21axayc4sx1nkzhmk2ap4l0cj52jrd"; configureFlags = [ "-fwith_alsa" "-fwith_conduit" "-fwith_datezone" "-fwith_dbus" "-fwith_inotify" "-fwith_iwlib" "-fwith_mpd" "-fwith_mpris" @@ -261272,7 +261628,7 @@ self: { description = "A Minimalistic Text Based Status Bar"; license = stdenv.lib.licenses.bsd3; platforms = [ "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs.xorg) libXpm; inherit (pkgs.xorg) libXrandr; + }) {inherit (pkgs.xorg) libXpm; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXrender; inherit (pkgs) wirelesstools;}; "xmonad" = callPackage @@ -263816,20 +264172,20 @@ self: { , conduit, conduit-extra, containers, cookie, deepseq, fast-logger , gauge, hspec, hspec-expectations, http-types, HUnit, memory , monad-logger, mtl, network, parsec, path-pieces, primitive - , random, resourcet, rio, shakespeare, streaming-commons + , random, resourcet, shakespeare, streaming-commons , template-haskell, text, time, transformers, unix-compat, unliftio , unordered-containers, vector, wai, wai-extra, wai-logger, warp , word8 }: mkDerivation { pname = "yesod-core"; - version = "1.6.16.1"; - sha256 = "0a0yv7wkwvb0n6iia532y9nzrirgnm09pjc8hpm0lx4ff609pgd2"; + version = "1.6.17"; + sha256 = "1i31xx9ili9r9il0mqpb04pgnq67rfsfr61pw9xmc163akgdfi4l"; libraryHaskellDepends = [ aeson auto-update base blaze-html blaze-markup bytestring case-insensitive cereal clientsession conduit conduit-extra containers cookie deepseq fast-logger http-types memory - monad-logger mtl parsec path-pieces primitive random resourcet rio + monad-logger mtl parsec path-pieces primitive random resourcet shakespeare template-haskell text time transformers unix-compat unliftio unordered-containers vector wai wai-extra wai-logger warp word8 @@ -264281,8 +264637,8 @@ self: { pname = "yesod-ip"; version = "0.5.1"; sha256 = "1gla2w9xi88y9d149n2r18xj5y1bmaykf258nl7x4hrkl0zgdq62"; - revision = "1"; - editedCabalFile = "0w0bw1zj984yl77vz3sx3avdjsck1chm262w64g4w6iaq6b9rbw1"; + revision = "2"; + editedCabalFile = "0yvi3mmknky12dqgjpfwa9nd6sn0n02xal6qcmr37dvnwnl4w87x"; libraryHaskellDepends = [ base http-api-data ip path-pieces persistent text yesod-core yesod-form @@ -265126,25 +265482,27 @@ self: { }) {}; "yesod-test" = callPackage - ({ mkDerivation, attoparsec, base, blaze-builder, blaze-html + ({ mkDerivation, aeson, attoparsec, base, blaze-builder, blaze-html , bytestring, case-insensitive, conduit, containers, cookie, hspec , hspec-core, html-conduit, http-types, HUnit, memory, network - , pretty-show, semigroups, text, time, transformers, unliftio, wai - , wai-extra, xml-conduit, xml-types, yesod-core, yesod-form + , pretty-show, semigroups, text, time, transformers, unliftio + , unliftio-core, wai, wai-extra, xml-conduit, xml-types, yesod-core + , yesod-form }: mkDerivation { pname = "yesod-test"; - version = "1.6.8"; - sha256 = "1c8xana3lf79db17mc74q88ygdskhyhvrv325fpwdw00fcwc0fn6"; + version = "1.6.9"; + sha256 = "0v25lqq7hgd5lggnyfd9kamkzd4126rd7vlhc131n253n4by4yak"; libraryHaskellDepends = [ - attoparsec base blaze-builder blaze-html bytestring + aeson attoparsec base blaze-builder blaze-html bytestring case-insensitive conduit containers cookie hspec-core html-conduit http-types HUnit memory network pretty-show semigroups text time transformers wai wai-extra xml-conduit xml-types yesod-core ]; testHaskellDepends = [ base bytestring containers cookie hspec html-conduit http-types - HUnit text unliftio wai wai-extra xml-conduit yesod-core yesod-form + HUnit text unliftio unliftio-core wai wai-extra xml-conduit + yesod-core yesod-form ]; description = "integration testing for WAI/Yesod Applications"; license = stdenv.lib.licenses.mit; diff --git a/pkgs/development/idris-modules/tparsec.nix b/pkgs/development/idris-modules/tparsec.nix index 650d843be84..599ca72c615 100644 --- a/pkgs/development/idris-modules/tparsec.nix +++ b/pkgs/development/idris-modules/tparsec.nix @@ -1,18 +1,21 @@ { build-idris-package , fetchFromGitHub +, contrib , lib }: build-idris-package { name = "tparsec"; - version = "2019-06-18"; + version = "2019-09-19"; ipkgName = "TParsec"; + + idrisDeps = [ contrib ]; src = fetchFromGitHub { owner = "gallais"; repo = "idris-tparsec"; - rev = "3809afd8735b0054e5db788f18a7fa8ed71d8278"; - sha256 = "0wmgg1zg9p8gqlfvcsnww17jsifx9987cxqdq6kbdgasn26w2rqx"; + rev = "cbaea6ec7e5b62536666329940f3ffb5b8b59036"; + sha256 = "0bzdv90a83irn7ca268acl19mjg9vxjmc4saa4naj4hdmg7srb2v"; }; meta = { diff --git a/pkgs/development/interpreters/clojure/default.nix b/pkgs/development/interpreters/clojure/default.nix index 7b730fc3926..8187bf4af8e 100644 --- a/pkgs/development/interpreters/clojure/default.nix +++ b/pkgs/development/interpreters/clojure/default.nix @@ -2,30 +2,30 @@ stdenv.mkDerivation rec { pname = "clojure"; - version = "1.10.1.489"; + version = "1.10.1.492"; src = fetchurl { url = "https://download.clojure.org/install/clojure-tools-${version}.tar.gz"; - sha256 = "12ks7adh5cx99l5vydppkqknk5nvv9vsj2k0afcwwxd897m794kz"; + sha256 = "09mhy5xw9kdr10a1xpbn5v97qyyhngw5s1n1alrs45a4m3l11iky"; }; buildInputs = [ makeWrapper ]; - outputs = [ "out" "prefix" ]; - installPhase = let binPath = stdenv.lib.makeBinPath [ rlwrap jdk11 ]; - in '' - mkdir -p $prefix/libexec - cp clojure-tools-${version}.jar $prefix/libexec - cp example-deps.edn $prefix - - substituteInPlace clojure --replace PREFIX $prefix - - install -Dt $out/bin clj clojure - wrapProgram $out/bin/clj --prefix PATH : $out/bin:${binPath} - wrapProgram $out/bin/clojure --prefix PATH : $out/bin:${binPath} - ''; + in + '' + mkdir -p $out/libexec + cp clojure-tools-${version}.jar $out/libexec + cp example-deps.edn $out + cp deps.edn $out + + substituteInPlace clojure --replace PREFIX $out + + install -Dt $out/bin clj clojure + wrapProgram $out/bin/clj --prefix PATH : $out/bin:${binPath} + wrapProgram $out/bin/clojure --prefix PATH : $out/bin:${binPath} + ''; meta = with stdenv.lib; { description = "A Lisp dialect for the JVM"; diff --git a/pkgs/development/interpreters/duktape/default.nix b/pkgs/development/interpreters/duktape/default.nix index f968e04bbe9..369c3840b87 100644 --- a/pkgs/development/interpreters/duktape/default.nix +++ b/pkgs/development/interpreters/duktape/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "duktape"; - version = "2.4.0"; + version = "2.5.0"; src = fetchurl { url = "http://duktape.org/duktape-${version}.tar.xz"; - sha256 = "1z3i0ymnkk6q48bmbgh59g1ryrwjdv46vrf6nbnmqfv3s43r7a46"; + sha256 = "05ln6b2a0s8ynz28armwqs2r5zjyi3cxi0dx6ahnxlqw19b13m43"; }; buildPhase = '' diff --git a/pkgs/development/interpreters/gauche/default.nix b/pkgs/development/interpreters/gauche/default.nix index 71542046af9..9b38d1e4ad5 100644 --- a/pkgs/development/interpreters/gauche/default.nix +++ b/pkgs/development/interpreters/gauche/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "gauche"; - version = "0.9.8"; + version = "0.9.9"; src = fetchurl { url = "mirror://sourceforge/gauche/Gauche-${version}.tgz"; - sha256 = "0jxp1ladpy8kvfvk561c64spf1c3d6giqla6zscqkd6qa480vcry"; + sha256 = "1yzpszhw52vkpr65r5d4khf3489mnnvnw58dd2wsvvx7499k5aac"; }; nativeBuildInputs = [ pkgconfig texinfo ]; diff --git a/pkgs/development/interpreters/gtk-server/default.nix b/pkgs/development/interpreters/gtk-server/default.nix index 6f5a5ec0f19..4a8330f2749 100644 --- a/pkgs/development/interpreters/gtk-server/default.nix +++ b/pkgs/development/interpreters/gtk-server/default.nix @@ -1,28 +1,34 @@ -{ stdenv, fetchurl, libffcall, gtk2, pkgconfig }: +{ stdenv, fetchurl +, glib +, gtk3 +, libffcall +, pkgconfig +, wrapGAppsHook +}: stdenv.mkDerivation rec { - v = "2.3.1"; - name = "gtk-server-${v}"; + pname = "gtk-server"; + version = "2.4.5"; src = fetchurl { - url = "mirror://sourceforge/gtk-server/${name}-sr.tar.gz"; - sha256 = "0z8ng5rhxc7fpsj3d50h25wkgcnxjfy030jm8r9w9m729w2c9hxb"; + url = "https://www.gtk-server.org/stable/gtk-server-${version}.tar.gz"; + sha256 = "0vlx5ibvc7hyc8yipjgvrx1azvmh42i9fv1khg3dvn09nrdkrc7f"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libffcall gtk2 ]; + preConfigure = '' + cd src + ''; - configureOptions = [ "--with-gtk2" ]; + nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; + buildInputs = [ libffcall glib gtk3 ]; - NIX_LDFLAGS = [ - "-ldl" - ]; + configureOptions = [ "--with-gtk3" ]; - meta = { + meta = with stdenv.lib; { description = "gtk-server for interpreted GUI programming"; - homepage = http://www.gtk-server.org/; - license = stdenv.lib.licenses.gpl2Plus; - maintainers = [stdenv.lib.maintainers.tohl]; - platforms = stdenv.lib.platforms.linux; + homepage = "http://www.gtk-server.org/"; + license = licenses.gpl2Plus; + maintainers = [ maintainers.tohl ]; + platforms = platforms.linux; }; } diff --git a/pkgs/development/interpreters/octave/default.nix b/pkgs/development/interpreters/octave/default.nix index 66f71738537..eb9827969e1 100644 --- a/pkgs/development/interpreters/octave/default.nix +++ b/pkgs/development/interpreters/octave/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, gfortran, readline, ncurses, perl, flex, texinfo, qhull , libsndfile, portaudio, libX11, graphicsmagick, pcre, pkgconfig, libGL, libGLU, fltk -, fftw, fftwSinglePrec, zlib, curl, qrupdate, openblas, arpack, libwebp +, fftw, fftwSinglePrec, zlib, curl, qrupdate, openblas, arpack, libwebp, gl2ps , qt ? null, qscintilla ? null, ghostscript ? null, llvm ? null, hdf5 ? null,glpk ? null , suitesparse ? null, gnuplot ? null, jdk ? null, python ? null, overridePlatforms ? null }: @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { buildInputs = [ gfortran readline ncurses perl flex texinfo qhull graphicsmagick pcre pkgconfig fltk zlib curl openblas libsndfile fftw - fftwSinglePrec portaudio qrupdate arpack libwebp ] + fftwSinglePrec portaudio qrupdate arpack libwebp gl2ps ] ++ (stdenv.lib.optional (qt != null) qt) ++ (stdenv.lib.optional (qscintilla != null) qscintilla) ++ (stdenv.lib.optional (ghostscript != null) ghostscript) diff --git a/pkgs/development/interpreters/php/default.nix b/pkgs/development/interpreters/php/default.nix index a58025c42ac..aa6dbcfccf0 100644 --- a/pkgs/development/interpreters/php/default.nix +++ b/pkgs/development/interpreters/php/default.nix @@ -182,6 +182,7 @@ let ++ optional mcryptSupport "--with-mcrypt=${libmcrypt'}" ++ optional bz2Support "--with-bz2=${bzip2.dev}" ++ optional (zipSupport && (versionOlder version "7.4")) "--enable-zip" + ++ optional (zipSupport && (versionAtLeast version "7.4")) "--with-zip" ++ optional ftpSupport "--enable-ftp" ++ optional fpmSupport "--enable-fpm" ++ optional ztsSupport "--enable-maintainer-zts" @@ -262,16 +263,16 @@ let in { php72 = generic { - version = "7.2.24"; - sha256 = "00znhjcn6k4mbxz6jqlqf6bzr4cqdf8pnbmxkg6bns1hnr6r6yd0"; + version = "7.2.25"; + sha256 = "17kb7b3wpdmdhnlv23qc0vax0lp2gr1v7dxwdgs8g78gxnqkdcvw"; # https://bugs.php.net/bug.php?id=76826 extraPatches = optional stdenv.isDarwin ./php72-darwin-isfinite.patch; }; php73 = generic { - version = "7.3.11"; - sha256 = "1rxm256vhnvyabfwmyv51sqrkjlid1g8lczcy4skc2f72d5zzlcj"; + version = "7.3.12"; + sha256 = "0fccmnrwwyy5zvhj8wbyqqlyqr7pr5v4pfiqriw0ahciz4lv05yk"; # https://bugs.php.net/bug.php?id=76826 extraPatches = optional stdenv.isDarwin ./php73-darwin-isfinite.patch; diff --git a/pkgs/development/interpreters/python/manylinux/default.nix b/pkgs/development/interpreters/python/manylinux/default.nix index 428e04f4f92..a44ead23752 100644 --- a/pkgs/development/interpreters/python/manylinux/default.nix +++ b/pkgs/development/interpreters/python/manylinux/default.nix @@ -33,8 +33,10 @@ let fi ''; + getLibOutputs = lib.mapAttrs (k: v: lib.getLib v); + # https://www.python.org/dev/peps/pep-0599/ - manylinux2014Libs = with pkgs; { + manylinux2014Libs = getLibOutputs(with pkgs; { "libgcc_s.so.1" = glibc; "libstdc++.so.6" = stdenv.cc.cc; "libm.so.6" = glibc; @@ -54,17 +56,18 @@ let "libgobject-2.0.so.0" = glib; "libgthread-2.0.so.0" = glib; "libglib-2.0.so.0" = glib; - }; + }); # https://www.python.org/dev/peps/pep-0571/ manylinux2010Libs = manylinux2014Libs; # https://www.python.org/dev/peps/pep-0513/ - manylinux1Libs = manylinux2010Libs // (with pkgs; { + manylinux1Libs = getLibOutputs(manylinux2010Libs // (with pkgs; { "libpanelw.so.5" = ncurses5; "libncursesw.so.5" = ncurses5; "libcrypt.so.1" = glibc; - }); + })); + in { # List of libraries that are needed for manylinux compatibility. # When using a wheel that is manylinux1 compatible, just extend diff --git a/pkgs/development/interpreters/ruby/default.nix b/pkgs/development/interpreters/ruby/default.nix index 723a4978234..d70c7e70f33 100644 --- a/pkgs/development/interpreters/ruby/default.nix +++ b/pkgs/development/interpreters/ruby/default.nix @@ -111,7 +111,7 @@ let cp ${config}/config.sub tool/ ''; - configureFlags = ["--enable-shared" "--enable-pthread"] + configureFlags = ["--enable-shared" "--enable-pthread" "--with-soname=ruby_${tag}"] ++ op useRailsExpress "--with-baseruby=${baseruby}/bin/ruby" ++ op (!docSupport) "--disable-install-doc" ++ ops stdenv.isDarwin [ diff --git a/pkgs/development/libraries/CGAL/4.nix b/pkgs/development/libraries/CGAL/4.nix new file mode 100644 index 00000000000..60c244009ce --- /dev/null +++ b/pkgs/development/libraries/CGAL/4.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchFromGitHub, cmake, boost, gmp, mpfr }: + +stdenv.mkDerivation rec { + version = "4.14.2"; + name = "cgal-" + version; + + src = fetchFromGitHub { + owner = "CGAL"; + repo = "releases"; + rev = "CGAL-${version}"; + sha256 = "1p1xyws2s9h2c8hlkz1af4ix48qma160av24by6lcm8al1g44pca"; + }; + + # note: optional component libCGAL_ImageIO would need zlib and opengl; + # there are also libCGAL_Qt{3,4} omitted ATM + buildInputs = [ boost gmp mpfr ]; + nativeBuildInputs = [ cmake ]; + + doCheck = false; + + meta = with stdenv.lib; { + description = "Computational Geometry Algorithms Library"; + homepage = http://cgal.org; + license = with licenses; [ gpl3Plus lgpl3Plus]; + platforms = platforms.all; + maintainers = [ maintainers.raskin ]; + }; +} diff --git a/pkgs/development/libraries/CGAL/default.nix b/pkgs/development/libraries/CGAL/default.nix index 95984c97001..d2d74769a1f 100644 --- a/pkgs/development/libraries/CGAL/default.nix +++ b/pkgs/development/libraries/CGAL/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, cmake, boost, gmp, mpfr }: stdenv.mkDerivation rec { - version = "4.14"; + version = "5.0"; name = "cgal-" + version; src = fetchFromGitHub { owner = "CGAL"; repo = "releases"; rev = "CGAL-${version}"; - sha256 = "0p0s1dl5a261zwy0hxa7ylkypk45rwc6n84lx507dwdhfz4ihv12"; + sha256 = "15r631kddphw3wsvrxrkdbq9y7m0q8kx0kwc9zq97x6ksg3v0gs3"; }; # note: optional component libCGAL_ImageIO would need zlib and opengl; diff --git a/pkgs/development/libraries/aqbanking/libchipcard.nix b/pkgs/development/libraries/aqbanking/libchipcard.nix index 23c300ab48a..32ec4dd06fd 100644 --- a/pkgs/development/libraries/aqbanking/libchipcard.nix +++ b/pkgs/development/libraries/aqbanking/libchipcard.nix @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Library for access to chipcards"; - homepage = http://www2.aquamaniac.de/sites/download/packages.php?package=02&showall=1; + homepage = "https://www.aquamaniac.de/rdm/projects/libchipcard"; license = licenses.lgpl21; maintainers = with maintainers; [ aszlig ]; platforms = platforms.linux; diff --git a/pkgs/development/libraries/cairo/default.nix b/pkgs/development/libraries/cairo/default.nix index d2e52638d07..80f8f9498d7 100644 --- a/pkgs/development/libraries/cairo/default.nix +++ b/pkgs/development/libraries/cairo/default.nix @@ -4,7 +4,7 @@ , gobjectSupport ? true, glib , xcbSupport ? x11Support, libxcb, xcbutil # no longer experimental since 1.12 , libGLSupported ? stdenv.lib.elem stdenv.hostPlatform.system stdenv.lib.platforms.mesaPlatforms -, glSupport ? config.cairo.gl or (libGLSupported && stdenv.isLinux && !stdenv.isAarch32 && !stdenv.isMips) +, glSupport ? config.cairo.gl or (libGLSupported && stdenv.isLinux) , libGL ? null # libGLU libGL is no longer a big dependency , pdfSupport ? true , darwin diff --git a/pkgs/development/libraries/coprthr/default.nix b/pkgs/development/libraries/coprthr/default.nix deleted file mode 100644 index 86f4485a900..00000000000 --- a/pkgs/development/libraries/coprthr/default.nix +++ /dev/null @@ -1,38 +0,0 @@ -{ stdenv, fetchurl, libelf, libconfig, libevent, which, unzip, perl, python -, bison, flex }: - -stdenv.mkDerivation rec { - pname = "coprthr"; - version = "1.6"; - - src = fetchurl { - url = "https://github.com/browndeer/coprthr/archive/stable-${version}.zip"; - sha256 = "0ilx4v1ydppjnq1i0z5j0x4lmi29z39sappar7c0wqady0b5dpz9"; - }; - - buildInputs = - [ libelf libconfig libevent which unzip perl python bison flex ]; - - patchPhase = '' - for x in src/libocl/gen_oclcall_hook.pl tools/cltrace/gen_interceptor.pl src/libocl/gen_oclcall.pl src/scripts/gen_ocl_call_vector.pl src/libstdcl/gen_clarg_setn.pl; do - substituteInPlace $x --replace "/usr/bin/perl" ${perl}/bin/perl - done - ''; - - configureFlags = - [ "--with-libelf=${libelf}" - "--with-libevent=${libevent.dev}" - "--with-libconfig=${libconfig}" - "--with-opencl-icd-path=$out/etc/OpenCL/vendors" - "--enable-user-install" - ]; - - meta = { - description = "The CO-PRocessing THReads SDK for OpenCL/STDCL"; - homepage = "http://www.browndeertechnology.com/coprthr.htm"; - license = stdenv.lib.licenses.lgpl3; - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.thoughtpolice ]; - broken = true; - }; -} diff --git a/pkgs/development/libraries/cppzmq/default.nix b/pkgs/development/libraries/cppzmq/default.nix index 2328bd53362..ccf38fa09fb 100644 --- a/pkgs/development/libraries/cppzmq/default.nix +++ b/pkgs/development/libraries/cppzmq/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "cppzmq"; - version = "4.4.1"; + version = "4.5.0"; src = fetchFromGitHub { owner = "zeromq"; repo = "cppzmq"; rev = "v${version}"; - sha256 = "15dgkv51csfkafplf0n0vqbjdr4pxqxq44dln0dcizhsn1p0a57q"; + sha256 = "1n34sj322ay8839q6cxivckkrhz9avy31615i5jdxfal06mgya43"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/dav1d/default.nix b/pkgs/development/libraries/dav1d/default.nix index 8abae8b8bb3..5542a37661a 100644 --- a/pkgs/development/libraries/dav1d/default.nix +++ b/pkgs/development/libraries/dav1d/default.nix @@ -9,14 +9,14 @@ assert useVulkan -> withExamples; stdenv.mkDerivation rec { pname = "dav1d"; - version = "0.5.1"; + version = "0.5.2"; src = fetchFromGitLab { domain = "code.videolan.org"; owner = "videolan"; repo = pname; rev = version; - sha256 = "08cgccp7xvwn24w9iab4fzi18x3m6xyvvnz36qf7clcz0aqbfb9w"; + sha256 = "0acxlgyz6c8ckw8vfgn60y2zg2n00l5xsq5jlxvwbh5w5pkc3ahf"; }; nativeBuildInputs = [ meson ninja nasm pkgconfig ]; diff --git a/pkgs/development/libraries/dconf/default.nix b/pkgs/development/libraries/dconf/default.nix index 7ce498da9f3..5b37088cd95 100644 --- a/pkgs/development/libraries/dconf/default.nix +++ b/pkgs/development/libraries/dconf/default.nix @@ -14,6 +14,11 @@ stdenv.mkDerivation rec { }; patches = [ + # Fix build with Meson 0.52 + (fetchpatch { + url = "https://gitlab.gnome.org/GNOME/dconf/commit/cc32667c5d7d9ff95e65cc21f59905d8f9218394.patch"; + sha256 = "02gfadn34bg818a7vb3crhsiahskiflcvx9l6iqwf1v269q93mr8"; + }) ]; postPatch = '' diff --git a/pkgs/development/libraries/dlib/default.nix b/pkgs/development/libraries/dlib/default.nix index aae8989c238..6d6bef21f39 100644 --- a/pkgs/development/libraries/dlib/default.nix +++ b/pkgs/development/libraries/dlib/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "dlib"; - version = "19.18"; + version = "19.19"; src = fetchFromGitHub { owner = "davisking"; repo = "dlib"; rev ="v${version}"; - sha256 = "1kbrcf35pn2ymyr8q48ls98n2zb7rrz5207kwpisfh6k22g802ic"; + sha256 = "0574p46zf85nx33cam4yqcg20g94kkmrvi5689r1xshprr0szghp"; }; postPatch = '' diff --git a/pkgs/development/libraries/faudio/default.nix b/pkgs/development/libraries/faudio/default.nix index 79980739e4f..1658d69d7a1 100644 --- a/pkgs/development/libraries/faudio/default.nix +++ b/pkgs/development/libraries/faudio/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "faudio"; - version = "19.11"; + version = "19.12"; src = fetchFromGitHub { owner = "FNA-XNA"; repo = "FAudio"; rev = version; - sha256 = "0ckpr6ffz8ssfh1y850dhip5s5jv0j6n90qz5yx1v9d6gpwf08rp"; + sha256 = "0y8dc7lnhh69wcwqma9spyxcahfhbfyg92h35sqkin6qfh5mngxr"; }; nativeBuildInputs = [cmake]; diff --git a/pkgs/development/libraries/ffmpeg-full/default.nix b/pkgs/development/libraries/ffmpeg-full/default.nix index 4af193014bb..afdc6c0f5e8 100644 --- a/pkgs/development/libraries/ffmpeg-full/default.nix +++ b/pkgs/development/libraries/ffmpeg-full/default.nix @@ -353,6 +353,7 @@ stdenv.mkDerivation rec { #(enableFeature (cdio-paranoia != null && gplLicensing) "libcdio") (enableFeature (if isLinux then libdc1394 != null && libraw1394 != null else false) "libdc1394") (enableFeature (libiconv != null) "iconv") + (enableFeature (libjack2 != null) "libjack") #(enableFeature (if isLinux then libiec61883 != null && libavc1394 != null && libraw1394 != null else false) "libiec61883") (enableFeature (if isLinux && !isAarch64 then libmfx != null else false) "libmfx") (enableFeature (libmodplug != null) "libmodplug") diff --git a/pkgs/development/libraries/folly/default.nix b/pkgs/development/libraries/folly/default.nix index 2dfb5e9e248..15f29ce77f5 100644 --- a/pkgs/development/libraries/folly/default.nix +++ b/pkgs/development/libraries/folly/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "folly"; - version = "2019.10.21.00"; + version = "2019.11.11.00"; src = fetchFromGitHub { owner = "facebook"; repo = "folly"; rev = "v${version}"; - sha256 = "1jy0yxqzcxxs6sq8161zbdzj4ngwjs0h2aca6n9qkaj1v5jd27c7"; + sha256 = "1sgv7sdalbs7zhz3zcc95gn2h8j2xjf7hkw2c618zc3pdn6aa58w"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/fplll/default.nix b/pkgs/development/libraries/fplll/default.nix index c2952cb47f1..694b6d567eb 100644 --- a/pkgs/development/libraries/fplll/default.nix +++ b/pkgs/development/libraries/fplll/default.nix @@ -1,22 +1,55 @@ -{stdenv, fetchFromGitHub, autoconf, automake, libtool, gettext, autoreconfHook -, gmp, mpfr +{ stdenv +, fetchFromGitHub +, fetchpatch +, gettext +, autoreconfHook +, gmp +, mpfr }: + stdenv.mkDerivation rec { pname = "fplll"; - version = "5.2.1"; + version = "5.3.0"; + src = fetchFromGitHub { - owner = pname; - repo = pname; + owner = "fplll"; + repo = "fplll"; rev = version; - sha256 = "015qmrd7nfaysbv1hbwiprz9g6hnww1y1z1xw8f43ysb7k1b5nbg"; + sha256 = "0wxa4xs7as7y47h7i6prmk5r0srabdvrlkvza3j50pixir5swgvh"; }; - nativeBuildInputs = [autoconf automake libtool gettext autoreconfHook]; - buildInputs = [gmp mpfr]; - meta = { - inherit version; + + patches = [ + # https://github.com/fplll/fpylll/issues/161 + (fetchpatch { + name = "fix-out-of-bounds-access.patch"; + url = "https://github.com/fplll/fplll/pull/398/commits/f68e257228bf073ef380f996326d02197ce7b0e4.patch"; + sha256 = "1rapkcf389lf579va6kbnvhzyv36n4l4d9n0vg2zxprvql8wvm7m"; + }) + ]; + + nativeBuildInputs = [ + gettext + autoreconfHook + ]; + + buildInputs = [ + gmp + mpfr + ]; + + meta = with stdenv.lib; { description = ''Lattice algorithms using floating-point arithmetic''; - license = stdenv.lib.licenses.lgpl21Plus; - maintainers = [stdenv.lib.maintainers.raskin]; - platforms = stdenv.lib.platforms.unix; + changelog = [ + # Some release notes are added to the github tags, though they are not + # always complete. + "https://github.com/fplll/fplll/releases/tag/${version}" + # Releases are announced on this mailing list. Unfortunately it is not + # possible to generate a direct link to the most recent announcement, but + # this search should find it. + "https://groups.google.com/forum/#!searchin/fplll-devel/FPLLL$20${version}" + ]; + license = licenses.lgpl21Plus; + maintainers = with maintainers; [raskin timokau]; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/freeglut/default.nix b/pkgs/development/libraries/freeglut/default.nix index 8412248b617..16c35347bc5 100644 --- a/pkgs/development/libraries/freeglut/default.nix +++ b/pkgs/development/libraries/freeglut/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchurl, libXi, libXrandr, libXxf86vm, libGL, libGLU, xlibsWrapper, cmake }: -let version = "3.0.0"; +let version = "3.2.1"; in stdenv.mkDerivation { pname = "freeglut"; inherit version; src = fetchurl { url = "mirror://sourceforge/freeglut/freeglut-${version}.tar.gz"; - sha256 = "18knkyczzwbmyg8hr4zh8a1i5ga01np2jzd1rwmsh7mh2n2vwhra"; + sha256 = "0s6sk49q8ijgbsrrryb7dzqx2fa744jhx1wck5cz5jia2010w06l"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/glibc/2.27-CVE-2019-19126.patch b/pkgs/development/libraries/glibc/2.27-CVE-2019-19126.patch new file mode 100644 index 00000000000..2c558f53b73 --- /dev/null +++ b/pkgs/development/libraries/glibc/2.27-CVE-2019-19126.patch @@ -0,0 +1,18 @@ +Adapted from https://sourceware.org/git/gitweb.cgi?p=glibc.git;a=patch;h=4d5cfeb510125345cb41431afc9022492994cffa, omitting changes to NEWS +diff --git a/sysdeps/unix/sysv/linux/x86_64/64/dl-librecon.h b/sysdeps/unix/sysv/linux/x86_64/64/dl-librecon.h +index 1943691..ac694c0 100644 +--- a/sysdeps/unix/sysv/linux/x86_64/64/dl-librecon.h ++++ b/sysdeps/unix/sysv/linux/x86_64/64/dl-librecon.h +@@ -31,7 +31,8 @@ + environment variable, LD_PREFER_MAP_32BIT_EXEC. */ + #define EXTRA_LD_ENVVARS \ + case 21: \ +- if (memcmp (envline, "PREFER_MAP_32BIT_EXEC", 21) == 0) \ ++ if (!__libc_enable_secure \ ++ && memcmp (envline, "PREFER_MAP_32BIT_EXEC", 21) == 0) \ + GLRO(dl_x86_cpu_features).feature[index_arch_Prefer_MAP_32BIT_EXEC] \ + |= bit_arch_Prefer_MAP_32BIT_EXEC; \ + break; +-- +2.9.3 + diff --git a/pkgs/development/libraries/glibc/common.nix b/pkgs/development/libraries/glibc/common.nix index edf4d135aba..32be2205bcc 100644 --- a/pkgs/development/libraries/glibc/common.nix +++ b/pkgs/development/libraries/glibc/common.nix @@ -98,7 +98,10 @@ stdenv.mkDerivation ({ # https://sourceware.org/git/gitweb.cgi?p=glibc.git;h=f51c8367685dc888a02f7304c729ed5277904aff ./CVE-2018-11237.patch ] - ++ lib.optional stdenv.isx86_64 ./fix-x64-abi.patch + ++ lib.optionals stdenv.isx86_64 [ + ./fix-x64-abi.patch + ./2.27-CVE-2019-19126.patch + ] ++ lib.optional stdenv.hostPlatform.isMusl ./fix-rpc-types-musl-conflicts.patch ++ lib.optional stdenv.buildPlatform.isDarwin ./darwin-cross-build.patch diff --git a/pkgs/development/libraries/glog/default.nix b/pkgs/development/libraries/glog/default.nix index 6aa300e2b62..792217043da 100644 --- a/pkgs/development/libraries/glog/default.nix +++ b/pkgs/development/libraries/glog/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, perl }: +{ stdenv, lib, fetchFromGitHub, fetchpatch, autoreconfHook, perl }: stdenv.mkDerivation rec { pname = "glog"; @@ -11,6 +11,15 @@ stdenv.mkDerivation rec { sha256 = "1xd3maiipfbxmhc9rrblc5x52nxvkwxp14npg31y5njqvkvzax9b"; }; + patches = lib.optionals stdenv.hostPlatform.isMusl [ + # TODO: Remove at next release that includes this commit. + (fetchpatch { + name = "glog-Fix-symbolize_unittest-for-musl-builds.patch"; + url = "https://github.com/google/glog/commit/834dd780bf1fe0704b8ed0350ca355a55f711a9f.patch"; + sha256 = "0k4lanxg85anyvjsj3mh93bcgds8gizpiamcy2zvs3yyfjl40awn"; + }) + ]; + nativeBuildInputs = [ autoreconfHook ]; checkInputs = [ perl ]; diff --git a/pkgs/development/libraries/glui/default.nix b/pkgs/development/libraries/glui/default.nix index 8ac42375bf9..d84a9227c3b 100644 --- a/pkgs/development/libraries/glui/default.nix +++ b/pkgs/development/libraries/glui/default.nix @@ -1,5 +1,5 @@ { stdenv -, fetchurl +, fetchFromGitHub , freeglut , libGL , libGLU @@ -11,17 +11,17 @@ stdenv.mkDerivation rec { pname = "glui"; - version = "2.36"; + version = "2.37"; - src = fetchurl { - url = "mirror://sourceforge/project/glui/Source/${version}/glui-${version}.tgz"; - sha256 = "11r7f0k5jlbl825ibhm5c6bck0fn1hbliya9x1f253ikry1mxvy1"; + src = fetchFromGitHub { + owner = "libglui"; + repo = "glui"; + rev = version; + sha256 = "0qg2y8w95s03zay1qsqs8pqxxlg6l9kwm7rrs1qmx0h22sxb360i"; }; buildInputs = [ freeglut libGLU libGL libXmu libXext libX11 libXi ]; - preConfigure = ''cd src''; - installPhase = '' mkdir -p "$out"/{bin,lib,share/glui/doc,include} cp -rT bin "$out/bin" diff --git a/pkgs/development/libraries/gnutls/default.nix b/pkgs/development/libraries/gnutls/default.nix index 1b97c369edf..deef141c5df 100644 --- a/pkgs/development/libraries/gnutls/default.nix +++ b/pkgs/development/libraries/gnutls/default.nix @@ -8,7 +8,7 @@ assert guileBindings -> guile != null; let - version = "3.6.10"; + version = "3.6.11.1"; # XXX: Gnulib's `test-select' fails on FreeBSD: # http://hydra.nixos.org/build/2962084/nixlog/1/raw . @@ -24,7 +24,7 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://gnupg/gnutls/v3.6/gnutls-${version}.tar.xz"; - sha256 = "14r2h73yfj66cm14k9mnb3kgzq5a7qjg5b31m53bf19vcxkwmwxi"; + sha256 = "1y1wadpsrj5ai603xv5bgssl9v0pb1si2hg14zqdnmcsvgri5fpv"; }; outputs = [ "bin" "dev" "out" "man" "devdoc" ]; diff --git a/pkgs/development/libraries/gstreamer/bad/default.nix b/pkgs/development/libraries/gstreamer/bad/default.nix index 22815c95647..9b2d3d0e247 100644 --- a/pkgs/development/libraries/gstreamer/bad/default.nix +++ b/pkgs/development/libraries/gstreamer/bad/default.nix @@ -86,13 +86,13 @@ let inherit (stdenv.lib) optional optionals; in stdenv.mkDerivation rec { pname = "gst-plugins-bad"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "1dddqacxgp77f3nl153x5a6139wdphc9phds2fpqb2cv6faiqj2n"; + sha256 = "0x0y0hm0ga3zqi5q4090hw5sjh59y1ry9ak16qsaascm72i7mjzi"; }; patches = [ diff --git a/pkgs/development/libraries/gstreamer/base/default.nix b/pkgs/development/libraries/gstreamer/base/default.nix index d38199cf787..178f6a1fe89 100644 --- a/pkgs/development/libraries/gstreamer/base/default.nix +++ b/pkgs/development/libraries/gstreamer/base/default.nix @@ -26,6 +26,7 @@ , libXv , enableWayland ? stdenv.isLinux , wayland +, wayland-protocols , enableAlsa ? stdenv.isLinux , alsaLib # Enabling Cocoa seems to currently not work, giving compile @@ -40,13 +41,13 @@ stdenv.mkDerivation rec { pname = "gst-plugins-base"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0aybbwnzm15074smdk2bamj3ssck3hjvmilvgh49f19xjf4w8g2w"; + sha256 = "0sl1hxlyq46r02k7z70v09vx1gi4rcypqmzra9jid93lzvi76gmi"; }; patches = [ @@ -82,10 +83,15 @@ stdenv.mkDerivation rec { ] ++ lib.optionals stdenv.isDarwin [ pango darwin.apple_sdk.frameworks.OpenGL - ] ++ lib.optional enableAlsa alsaLib - ++ lib.optionals enableX11 [ libXv pango ] - ++ lib.optional enableWayland wayland - ++ lib.optional enableCocoa darwin.apple_sdk.frameworks.Cocoa + ] ++ lib.optionals enableAlsa [ + alsaLib + ] ++ lib.optionals enableX11 [ + libXv + pango + ] ++ lib.optionals enableWayland [ + wayland + wayland-protocols + ] ++ lib.optional enableCocoa darwin.apple_sdk.frameworks.Cocoa ++ lib.optional enableCdparanoia cdparanoia; propagatedBuildInputs = [ @@ -95,9 +101,8 @@ stdenv.mkDerivation rec { mesonFlags = [ "-Dexamples=disabled" # requires many dependencies and probably not useful for our users "-Dgl-graphene=disabled" # not packaged in nixpkgs as of writing - "-Dgl_platform=[${lib.optionalString (enableX11 || enableWayland || enableCocoa) "auto"}]" # See https://github.com/GStreamer/gst-plugins-base/blob/d64a4b7a69c3462851ff4dcfa97cc6f94cd64aef/meson_options.txt#L15 for a list of choices - "-Dgl_winsys=[${lib.concatStringsSep "," (lib.optional enableX11 "x11" ++ lib.optional enableWayland "wayland" ++ lib.optional enableCocoa "cocoa")}]" + "-Dgl_winsys=${lib.concatStringsSep "," (lib.optional enableX11 "x11" ++ lib.optional enableWayland "wayland" ++ lib.optional enableCocoa "cocoa")}" # We must currently disable gtk_doc API docs generation, # because it is not compatible with some features being disabled. # See for example diff --git a/pkgs/development/libraries/gstreamer/core/default.nix b/pkgs/development/libraries/gstreamer/core/default.nix index bbef0178312..3dd7a547de9 100644 --- a/pkgs/development/libraries/gstreamer/core/default.nix +++ b/pkgs/development/libraries/gstreamer/core/default.nix @@ -25,14 +25,14 @@ stdenv.mkDerivation rec { pname = "gstreamer"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" "devdoc" ]; outputBin = "dev"; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0z9pyhf6zm1r0spw6zym80bvbyx6h8xg9h6535csbnn48ws1q882"; + sha256 = "0kp93622y29pck8asvil1fmzf55s2gx76wv475a6izc3cwj49w73"; }; patches = [ diff --git a/pkgs/development/libraries/gstreamer/ges/default.nix b/pkgs/development/libraries/gstreamer/ges/default.nix index d62af71d3ae..6e9a604f794 100644 --- a/pkgs/development/libraries/gstreamer/ges/default.nix +++ b/pkgs/development/libraries/gstreamer/ges/default.nix @@ -15,13 +15,13 @@ stdenv.mkDerivation rec { pname = "gstreamer-editing-services"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "10375z5mc3bwfs07mhmfx943sbp55z8m8ihp9xpcknkdks7qg168"; + sha256 = "05hcf3prna8ajjnqd53221gj9syarrrjbgvjcbhicv0c38csc1hf"; }; patches = [ diff --git a/pkgs/development/libraries/gstreamer/good/default.nix b/pkgs/development/libraries/gstreamer/good/default.nix index 9fa94a02f88..136dd1e1712 100644 --- a/pkgs/development/libraries/gstreamer/good/default.nix +++ b/pkgs/development/libraries/gstreamer/good/default.nix @@ -48,13 +48,13 @@ let in stdenv.mkDerivation rec { pname = "gst-plugins-good"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "07wgz9anf4ram2snp8n1wv6l0q3pd00iaw8bvw3wgklg05lvxflz"; + sha256 = "068k3cbv1yf3gbllfdzqsg263kzwh21y8dpwr0wvgh15vapkpfs0"; }; patches = [ ./fix_pkgconfig_includedir.patch ]; diff --git a/pkgs/development/libraries/gstreamer/libav/default.nix b/pkgs/development/libraries/gstreamer/libav/default.nix index 5319de255e7..e36eba37007 100644 --- a/pkgs/development/libraries/gstreamer/libav/default.nix +++ b/pkgs/development/libraries/gstreamer/libav/default.nix @@ -15,11 +15,11 @@ stdenv.mkDerivation rec { pname = "gst-libav"; - version = "1.16.1"; + version = "1.16.2"; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "1i31ra0l77cfahb6k5xpx45zwvpskzm848aijsbbx9x4x65799g8"; + sha256 = "1wpfilc98bad9nsv3y1qapxp35dvn2mvwvrmqwrsj58cf09gc967"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/rtsp-server/default.nix b/pkgs/development/libraries/gstreamer/rtsp-server/default.nix index e602a96291e..dfb18754c83 100644 --- a/pkgs/development/libraries/gstreamer/rtsp-server/default.nix +++ b/pkgs/development/libraries/gstreamer/rtsp-server/default.nix @@ -11,11 +11,11 @@ stdenv.mkDerivation rec { pname = "gst-rtsp-server"; - version = "1.16.1"; + version = "1.16.2"; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0i01f1nr0921z6z4nrh8icz76s2n7i228aqxg1ihvxl65ynsraxh"; + sha256 = "0vn23nxwvs96g7gcxw5zbnw23hkhky8a8r42wq68411vgf1s41yy"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/ugly/default.nix b/pkgs/development/libraries/gstreamer/ugly/default.nix index a117190a9e1..870b4468860 100644 --- a/pkgs/development/libraries/gstreamer/ugly/default.nix +++ b/pkgs/development/libraries/gstreamer/ugly/default.nix @@ -21,13 +21,13 @@ stdenv.mkDerivation rec { pname = "gst-plugins-ugly"; - version = "1.16.1"; + version = "1.16.2"; outputs = [ "out" "dev" ]; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "07cajqjs8pqchpf2sm87hljx4ibwvkiavqxmacxsr5airar17yab"; + sha256 = "1jpvc32x6q01zjkfgh6gmq6aaikiyfwwnhj7bmvn52syhrdl202m"; }; nativeBuildInputs = [ diff --git a/pkgs/development/libraries/gstreamer/vaapi/default.nix b/pkgs/development/libraries/gstreamer/vaapi/default.nix index 0b47ef2244c..cac56f64cc9 100644 --- a/pkgs/development/libraries/gstreamer/vaapi/default.nix +++ b/pkgs/development/libraries/gstreamer/vaapi/default.nix @@ -21,11 +21,11 @@ stdenv.mkDerivation rec { pname = "gstreamer-vaapi"; - version = "1.16.1"; + version = "1.16.2"; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "0fk0nymvbfc04fv63fj2r6q9vvi431svhkrwpr7kdjvq3rphymyb"; + sha256 = "00f6sx700qm1ximi1ag2c27m35dywwhhg6awhz85va34mfqff78r"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gstreamer/validate/default.nix b/pkgs/development/libraries/gstreamer/validate/default.nix index ad424641b81..9439ddd94e8 100644 --- a/pkgs/development/libraries/gstreamer/validate/default.nix +++ b/pkgs/development/libraries/gstreamer/validate/default.nix @@ -10,11 +10,11 @@ stdenv.mkDerivation rec { pname = "gst-validate"; - version = "1.16.1"; + version = "1.16.2"; src = fetchurl { url = "${meta.homepage}/src/${pname}/${pname}-${version}.tar.xz"; - sha256 = "1698arvmpb0cvyi8ll1brvs51vs7i3f3fw19iswh8xhj5adrn1vz"; + sha256 = "1jpfrzg3yc6kp66bgq3jy14xsj3x71mk2zh0k16yf0326awwqqa8"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/intel-media-sdk/default.nix b/pkgs/development/libraries/intel-media-sdk/default.nix index 731289d6f9c..49375830ccb 100644 --- a/pkgs/development/libraries/intel-media-sdk/default.nix +++ b/pkgs/development/libraries/intel-media-sdk/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "intel-media-sdk"; - version = "19.3.0"; + version = "19.3.1"; src = fetchurl { url = "https://github.com/Intel-Media-SDK/MediaSDK/archive/intel-mediasdk-${version}.tar.gz"; - sha256 = "0pgg16a4gsh8yjyz64r28bmkg9xxcy8m0dkvrdz03svkll9v7v3n"; + sha256 = "12w1f3krcrjyhax4y3hbs7galhf4rabxym2fxjyil8cszx5fh433"; }; # patchelf is needed for binaries in $out/share/samples @@ -23,6 +23,6 @@ stdenv.mkDerivation rec { description = "Intel Media SDK."; license = licenses.mit; maintainers = with maintainers; [ midchildan ]; - platforms = with platforms; linux; + platforms = [ "x86_64-linux" ]; }; } diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index 9e03965441e..d18dea1c381 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -97,6 +97,7 @@ let breeze-icons = callPackage ./breeze-icons.nix {}; kapidox = callPackage ./kapidox.nix {}; karchive = callPackage ./karchive.nix {}; + kcalendarcore = callPackage ./kcalendarcore.nix {}; kcodecs = callPackage ./kcodecs.nix {}; kconfig = callPackage ./kconfig.nix {}; kcoreaddons = callPackage ./kcoreaddons.nix {}; diff --git a/pkgs/development/libraries/kde-frameworks/fetch.sh b/pkgs/development/libraries/kde-frameworks/fetch.sh index f06a515a83b..c76ff9fb2c8 100644 --- a/pkgs/development/libraries/kde-frameworks/fetch.sh +++ b/pkgs/development/libraries/kde-frameworks/fetch.sh @@ -1 +1 @@ -WGET_ARGS=( https://download.kde.org/stable/frameworks/5.62/ ) +WGET_ARGS=( https://download.kde.org/stable/frameworks/5.64/ ) diff --git a/pkgs/development/libraries/kde-frameworks/kcalendarcore.nix b/pkgs/development/libraries/kde-frameworks/kcalendarcore.nix new file mode 100644 index 00000000000..e0b6c5313bb --- /dev/null +++ b/pkgs/development/libraries/kde-frameworks/kcalendarcore.nix @@ -0,0 +1,16 @@ +{ + mkDerivation, + lib, + extra-cmake-modules, + libical +}: + +mkDerivation { + name = "kcalendarcore"; + meta = { + maintainers = [ lib.maintainers.nyanloutre ]; + }; + nativeBuildInputs = [ extra-cmake-modules ]; + propagatedBuildInputs = [ libical ]; + outputs = [ "out" "dev" ]; +} diff --git a/pkgs/development/libraries/kde-frameworks/ki18n.nix b/pkgs/development/libraries/kde-frameworks/ki18n.nix index 3b9ca74bbd0..69ad2fbc737 100644 --- a/pkgs/development/libraries/kde-frameworks/ki18n.nix +++ b/pkgs/development/libraries/kde-frameworks/ki18n.nix @@ -1,6 +1,6 @@ { mkDerivation, lib, - extra-cmake-modules, gettext, python, + extra-cmake-modules, gettext, python3, qtbase, qtdeclarative, qtscript, }: @@ -11,6 +11,6 @@ mkDerivation { broken = builtins.compareVersions qtbase.version "5.7.0" < 0; }; nativeBuildInputs = [ extra-cmake-modules ]; - propagatedNativeBuildInputs = [ gettext python ]; + propagatedNativeBuildInputs = [ gettext python3 ]; buildInputs = [ qtdeclarative qtscript ]; } diff --git a/pkgs/development/libraries/kde-frameworks/kwindowsystem/platform-plugins-path.patch b/pkgs/development/libraries/kde-frameworks/kwindowsystem/platform-plugins-path.patch index 7c86454c5cf..27501732210 100644 --- a/pkgs/development/libraries/kde-frameworks/kwindowsystem/platform-plugins-path.patch +++ b/pkgs/development/libraries/kde-frameworks/kwindowsystem/platform-plugins-path.patch @@ -1,17 +1,19 @@ -diff --git a/src/pluginwrapper.cpp b/src/pluginwrapper.cpp -index 8e6298a..210989a 100644 ---- a/src/pluginwrapper.cpp -+++ b/src/pluginwrapper.cpp -@@ -37,14 +37,10 @@ Q_GLOBAL_STATIC(KWindowSystemPluginWrapper, s_pluginWrapper) +Index: kwindowsystem-5.64.0/src/pluginwrapper.cpp +=================================================================== +--- kwindowsystem-5.64.0.orig/src/pluginwrapper.cpp ++++ kwindowsystem-5.64.0/src/pluginwrapper.cpp +@@ -37,16 +37,10 @@ Q_GLOBAL_STATIC(KWindowSystemPluginWrapp static QStringList pluginCandidates() { QStringList ret; -- foreach (const QString &path, QCoreApplication::libraryPaths()) { +- const auto paths = QCoreApplication::libraryPaths(); +- for (const QString &path : paths) { - QDir pluginDir(path + QLatin1String("/kf5/org.kde.kwindowsystem.platforms")); - if (!pluginDir.exists()) { - continue; - } -- foreach (const QString &entry, pluginDir.entryList(QDir::Files | QDir::NoDotAndDotDot)) { +- const auto entries = pluginDir.entryList(QDir::Files | QDir::NoDotAndDotDot); +- for (const QString &entry : entries) { - ret << pluginDir.absoluteFilePath(entry); - } + QDir pluginDir(QLatin1String(NIXPKGS_QT_PLUGIN_PATH) + QLatin1Literal("/kf5/org.kde.kwindowsystem.platforms")); diff --git a/pkgs/development/libraries/kde-frameworks/srcs.nix b/pkgs/development/libraries/kde-frameworks/srcs.nix index 6a7c7bc0c9c..32edca38710 100644 --- a/pkgs/development/libraries/kde-frameworks/srcs.nix +++ b/pkgs/development/libraries/kde-frameworks/srcs.nix @@ -3,635 +3,651 @@ { attica = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/attica-5.62.0.tar.xz"; - sha256 = "86b5388c93dd3375dbdca23b20d539af5ed9516f6a573e32549baac3200d029f"; - name = "attica-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/attica-5.64.0.tar.xz"; + sha256 = "c9b060693656a458f92905091e12d800be020abbf47bb68b9f769a191aa368d9"; + name = "attica-5.64.0.tar.xz"; }; }; baloo = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/baloo-5.62.0.tar.xz"; - sha256 = "454e6808a5fe523785e5e67b7c0453fd1b6c42035aaf8084c39ad30bcbbc8d1a"; - name = "baloo-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/baloo-5.64.0.tar.xz"; + sha256 = "adaaef1aeec07ccc210210a2e67f4d12c0275226bb05d0220da0281f1a3984c2"; + name = "baloo-5.64.0.tar.xz"; }; }; bluez-qt = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/bluez-qt-5.62.0.tar.xz"; - sha256 = "545a6c76042a077f04b0a6c2b8dfbe3b5b1a582edaae4454d7a57c06ab033715"; - name = "bluez-qt-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/bluez-qt-5.64.0.tar.xz"; + sha256 = "7d6c7ba913cea6059327726325b8af4cf2baa7594b8be3143e0649eaa36f8384"; + name = "bluez-qt-5.64.0.tar.xz"; }; }; breeze-icons = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/breeze-icons-5.62.0.tar.xz"; - sha256 = "5858100f1a87dc865f44cde159aaee025ec46f894f544c75086ea0e8f9555951"; - name = "breeze-icons-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/breeze-icons-5.64.0.tar.xz"; + sha256 = "08c2f7efc5f1550668dd2e0cff1641b1b6ec8a91f01614ee14c6abc4d975672f"; + name = "breeze-icons-5.64.0.tar.xz"; }; }; extra-cmake-modules = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/extra-cmake-modules-5.62.0.tar.xz"; - sha256 = "e07acfecef1b4c7a481a253b58b75072a4f887376301108ed2c753b5002adcd4"; - name = "extra-cmake-modules-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/extra-cmake-modules-5.64.0.tar.xz"; 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}; }; kwidgetsaddons = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/kwidgetsaddons-5.62.0.tar.xz"; - sha256 = "3a8e75d544783a1f567016f2669c3cfdbf2809b0a3d25afd03d38af62a493671"; - name = "kwidgetsaddons-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/kwidgetsaddons-5.64.0.tar.xz"; + sha256 = "a2d4a47489621d095c4979ea25d5d8304cf4004b10a892a2b314d74cd30cb5da"; + name = "kwidgetsaddons-5.64.0.tar.xz"; }; }; kwindowsystem = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/kwindowsystem-5.62.0.tar.xz"; - sha256 = "116d75216ea001b2fc8688a72bcc6105b0b0966a2c5a084497f3aef80d158a67"; - name = "kwindowsystem-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/kwindowsystem-5.64.0.tar.xz"; + sha256 = "77c2e6b0032a79547f80bcd36682aa72c0e901e3b5acc83a58f69d644ce03dab"; + name = "kwindowsystem-5.64.0.tar.xz"; }; }; kxmlgui = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/kxmlgui-5.62.0.tar.xz"; - sha256 = "bc4321b4d44b0af1c2808814b89231a8c9e86de22ca1c0b080a769819ebc5d50"; - name = "kxmlgui-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/kxmlgui-5.64.0.tar.xz"; + sha256 = "faa95b92b3b03130022841a6797d5beb3efb6a0d757afaefe038889af76a1dd1"; + name = "kxmlgui-5.64.0.tar.xz"; }; }; kxmlrpcclient = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/kxmlrpcclient-5.62.0.tar.xz"; - sha256 = "c284c3e5962d2ed6d0737e5814b85fa4d7926131b7799272cb56c464a12c4530"; - name = "kxmlrpcclient-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/kxmlrpcclient-5.64.0.tar.xz"; + sha256 = "8c36472cb69a2d5eeb88c437907f7b0b46703ef34d04df7b45a8c90eb95fd6b0"; + name = "kxmlrpcclient-5.64.0.tar.xz"; }; }; modemmanager-qt = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/modemmanager-qt-5.62.0.tar.xz"; - sha256 = "b2a6517377b53aca895efd657d553dc5b057a673c07ccb10786031240b11adf5"; - name = "modemmanager-qt-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/modemmanager-qt-5.64.0.tar.xz"; + sha256 = "a9d8554b3720cf46aaaa70da87c79688afc5baa155ffd19ea00e4cae2a1caa21"; + name = "modemmanager-qt-5.64.0.tar.xz"; }; }; networkmanager-qt = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/networkmanager-qt-5.62.0.tar.xz"; - sha256 = "08f73ced96866b9dfded574a87c9e887dc907fc510d2764a4aa09315511cedf9"; - name = "networkmanager-qt-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/networkmanager-qt-5.64.0.tar.xz"; + sha256 = "369d0391e199d059dd2faa554324cbd45334f7864ccfc462699b06c89af04bbf"; + name = "networkmanager-qt-5.64.0.tar.xz"; }; }; oxygen-icons5 = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/oxygen-icons5-5.62.0.tar.xz"; - sha256 = "c066bc96fd45f3553e3c344c7cef34afda3180c95bf67af6cf20e964fd5c1a00"; - name = "oxygen-icons5-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/oxygen-icons5-5.64.0.tar.xz"; + sha256 = "41d415b4bd9cca0d9abc43b187059d833ce92b3fff3da66eb8ff4004215e91ef"; + name = "oxygen-icons5-5.64.0.tar.xz"; }; }; plasma-framework = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/plasma-framework-5.62.0.tar.xz"; - sha256 = "324bf14078459954c355bb6f146b927f6cbf915109365cdc58c1d81c8495bdb4"; - name = "plasma-framework-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/plasma-framework-5.64.0.tar.xz"; + sha256 = "3f1311a48826ab0a76f47d05b02f9a9486f821cc1ad757b895b570e371acfd09"; + name = "plasma-framework-5.64.0.tar.xz"; }; }; prison = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/prison-5.62.0.tar.xz"; - sha256 = "d7a024881119e2e91fe2ef98ec982f33e87d3f5584c3e4438638e23cf0106fb0"; - name = "prison-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/prison-5.64.0.tar.xz"; + sha256 = "31e136dd33940f32fdb87699b113c57aab566112bb9649f20a057c4eee20db2e"; + name = "prison-5.64.0.tar.xz"; }; }; purpose = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/purpose-5.62.0.tar.xz"; - sha256 = "ed0bdc72b1b95fe988fb2ceba5cc1bd36b5bf00d30c098e9de50fdc36d3b3492"; - name = "purpose-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/purpose-5.64.0.tar.xz"; + sha256 = "004794dfa2d0bcef316d582f37e5691e3980c99240ef570313a98a8d44235b0d"; + name = "purpose-5.64.0.tar.xz"; }; }; qqc2-desktop-style = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/qqc2-desktop-style-5.62.0.tar.xz"; - sha256 = "97234e956a7fc09bef0665e9a759d6f370419bd3cd2bbbd700849e4cbe549bfa"; - name = "qqc2-desktop-style-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/qqc2-desktop-style-5.64.0.tar.xz"; + sha256 = "b0e6ad1ccbd01b6974c3222c6098b6c1ae1fe594c26fe0e2817c35dd90b6013a"; + name = "qqc2-desktop-style-5.64.0.tar.xz"; }; }; solid = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/solid-5.62.0.tar.xz"; - sha256 = "24a01a7e89b2c1e39cb9ebc477f80f5ab966d35fce00f63682b159a15de64cc3"; - name = "solid-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/solid-5.64.0.tar.xz"; + sha256 = "fcbbfd124759854bde2da74e1768da818361f61f2839877b4efbcd38b825da6b"; + name = "solid-5.64.0.tar.xz"; }; }; sonnet = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/sonnet-5.62.0.tar.xz"; - sha256 = "a1a2d3500d7fc51d94fd6f9d951c83be86436284aeda8416963fc5213956a69a"; - name = "sonnet-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/sonnet-5.64.0.tar.xz"; + sha256 = "3af364858f76c0206136ae8f3c03da5442ea5e42d2560877f5e00f33850c84dc"; + name = "sonnet-5.64.0.tar.xz"; }; }; syndication = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/syndication-5.62.0.tar.xz"; - sha256 = "d315a5a5e691925df44ce30abbd5208b764a72eb42d38dc5b5ca134d71c05462"; - name = "syndication-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/syndication-5.64.0.tar.xz"; + sha256 = "bffcd673a70646c8cb683ed7b26f6ef251a2ffe439fc78123ccee4332b567b57"; + name = "syndication-5.64.0.tar.xz"; }; }; syntax-highlighting = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/syntax-highlighting-5.62.0.tar.xz"; - sha256 = "897fac9ec2e5112d629da464d47223129e547c314369e1518a12c5c94ff2a6fd"; - name = "syntax-highlighting-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/syntax-highlighting-5.64.0.tar.xz"; + sha256 = "9655fa79d99fb7d585ae1a11c03d204c83263fe19391e7610575fb0436052b5f"; + name = "syntax-highlighting-5.64.0.tar.xz"; }; }; threadweaver = { - version = "5.62.0"; + version = "5.64.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.62/threadweaver-5.62.0.tar.xz"; - sha256 = "aa1704c20c6d38fde4f9988e13cb97356e1c69c7a9d0401870b1515a2814294a"; - name = "threadweaver-5.62.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.64/threadweaver-5.64.0.tar.xz"; + sha256 = "4a3ec0b2b45a5997b24d60059d95006fca5fd86f5d619d8fb1fd30d7510f5a02"; + name = "threadweaver-5.64.0.tar.xz"; }; }; } diff --git a/pkgs/development/libraries/leatherman/default.nix b/pkgs/development/libraries/leatherman/default.nix index bdba8688f9d..0af7f29a41f 100644 --- a/pkgs/development/libraries/leatherman/default.nix +++ b/pkgs/development/libraries/leatherman/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "leatherman"; - version = "1.9.0"; + version = "1.9.1"; src = fetchFromGitHub { - sha256 = "029n16rsvj2abii6d1d4q01fygkicw8n3ja0iaribk4b4h5mc7vc"; + sha256 = "1aij0prpf7rvxx25qjf1krf0szb922hq9m6q58p90f5bjgymfzwh"; rev = version; repo = "leatherman"; owner = "puppetlabs"; diff --git a/pkgs/development/libraries/libebml/default.nix b/pkgs/development/libraries/libebml/default.nix index 2d15e419a76..591ad72e4ec 100644 --- a/pkgs/development/libraries/libebml/default.nix +++ b/pkgs/development/libraries/libebml/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libebml"; - version = "1.3.9"; + version = "1.3.10"; src = fetchFromGitHub { owner = "Matroska-Org"; repo = "libebml"; rev = "release-${version}"; - sha256 = "0q2xfabaymrf0xkhwc9akx6m04lgra2b53wcn9mnh5dqiiazizi7"; + sha256 = "1vn0g4hsygrm29qvnzhrblpwjcy2x6swf799ibxv3bzpi1j0gris"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/libffi/3.2.1-cygwin.patch b/pkgs/development/libraries/libffi/3.2.1-cygwin.patch deleted file mode 100644 index f3b38dbd1c1..00000000000 --- a/pkgs/development/libraries/libffi/3.2.1-cygwin.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- libffi-3.2.1/src/closures.c 2014-11-08 13:47:24.000000000 +0100 -+++ libffi-3.2.1/src/closures.c 2015-05-19 10:15:50.059325900 +0200 -@@ -212,6 +212,7 @@ - #include <sys/mman.h> - - /* Cygwin is Linux-like, but not quite that Linux-like. */ -+#define is_emutramp_enabled() 0 - #define is_selinux_enabled() 0 - - #endif /* !defined(X86_WIN32) && !defined(X86_WIN64) */ diff --git a/pkgs/development/libraries/libffi/default.nix b/pkgs/development/libraries/libffi/default.nix index 2918276ef21..cc080e7c638 100644 --- a/pkgs/development/libraries/libffi/default.nix +++ b/pkgs/development/libraries/libffi/default.nix @@ -7,45 +7,17 @@ }: stdenv.mkDerivation rec { - name = "libffi-3.2.1"; + name = "libffi-3.3"; src = fetchurl { url = "https://sourceware.org/pub/libffi/${name}.tar.gz"; - sha256 = "0dya49bnhianl0r65m65xndz6ls2jn1xngyn72gd28ls3n7bnvnh"; + sha256 = "0mi0cpf8aa40ljjmzxb7im6dbj45bb0kllcd09xgmp834y9agyvj"; }; - patches = stdenv.lib.optional stdenv.isCygwin ./3.2.1-cygwin.patch - ++ stdenv.lib.optional stdenv.isAarch64 (fetchpatch { - url = https://src.fedoraproject.org/rpms/libffi/raw/ccffc1700abfadb0969495a6e51b964117fc03f6/f/libffi-aarch64-rhbz1174037.patch; - sha256 = "1vpirrgny43hp0885rswgv3xski8hg7791vskpbg3wdjdpb20wbc"; - }) - ++ stdenv.lib.optional stdenv.hostPlatform.isMusl (fetchpatch { - name = "gnu-linux-define.patch"; - url = "https://git.alpinelinux.org/cgit/aports/plain/main/libffi/gnu-linux-define.patch?id=bb024fd8ec6f27a76d88396c9f7c5c4b5800d580"; - sha256 = "11pvy3xkhyvnjfyy293v51f1xjy3x0azrahv1nw9y9mw8bifa2j2"; - }) - ++ stdenv.lib.optional stdenv.hostPlatform.isRiscV (fetchpatch { - name = "riscv-support.patch"; - url = https://github.com/sorear/libffi-riscv/commit/e46492e8bb1695a19bc1053ed869e6c2bab02ff2.patch; - sha256 = "1vl1vbvdkigs617kckxvj8j4m2cwg62kxm1clav1w5rnw9afxg0y"; - }) - ++ stdenv.lib.optionals stdenv.isMips [ - (fetchpatch { - name = "0001-mips-Use-compiler-internal-define-for-linux.patch"; - url = "http://cgit.openembedded.org/openembedded-core/plain/meta/recipes-support/libffi/libffi/0001-mips-Use-compiler-internal-define-for-linux.patch?id=318e33a708378652edcf61ce7d9d7f3a07743000"; - sha256 = "1gc53lw90p6hc0cmhj3csrwincfz7va5ss995ksw5gm0yrr9mrvb"; - }) - (fetchpatch { - name = "0001-mips-fix-MIPS-softfloat-build-issue.patch"; - url = "http://cgit.openembedded.org/openembedded-core/plain/meta/recipes-support/libffi/libffi/0001-mips-fix-MIPS-softfloat-build-issue.patch?id=318e33a708378652edcf61ce7d9d7f3a07743000"; - sha256 = "0l8xgdciqalg4z9rcwyk87h8fdxpfv4hfqxwsy2agpnpszl5jjdq"; - }) - ]; + patches = []; outputs = [ "out" "dev" "man" "info" ]; - nativeBuildInputs = stdenv.lib.optional stdenv.hostPlatform.isRiscV autoreconfHook; - configureFlags = [ "--with-gcc-arch=generic" # no detection of -march= or -mtune= "--enable-pax_emutramp" @@ -62,15 +34,6 @@ stdenv.mkDerivation rec { dontStrip = stdenv.hostPlatform != stdenv.buildPlatform; # Don't run the native `strip' when cross-compiling. - # Install headers and libs in the right places. - postFixup = '' - mkdir -p "$dev/" - mv "$out/lib/${name}/include" "$dev/include" - rmdir "$out/lib/${name}" - substituteInPlace "$dev/lib/pkgconfig/libffi.pc" \ - --replace 'includedir=''${libdir}/libffi-3.2.1' "includedir=$dev" - ''; - meta = with stdenv.lib; { description = "A foreign function call interface library"; longDescription = '' @@ -88,9 +51,8 @@ stdenv.mkDerivation rec { conversions for values passed between the two languages. ''; homepage = http://sourceware.org/libffi/; - # See https://github.com/atgreen/libffi/blob/master/LICENSE . - license = licenses.free; - maintainers = [ ]; + license = licenses.mit; + maintainers = with maintainers; [ matthewbauer ]; platforms = platforms.all; }; } diff --git a/pkgs/development/libraries/libfido2/default.nix b/pkgs/development/libraries/libfido2/default.nix index 5fefdad08e7..a0f44a33220 100644 --- a/pkgs/development/libraries/libfido2/default.nix +++ b/pkgs/development/libraries/libfido2/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "libfido2"; - version = "1.2.0"; + version = "1.3.0"; src = fetchurl { - url = "https://developers.yubico.com/libfido2/Releases/libfido2-${version}.tar.gz"; - sha256 = "1pbllhzcrzkgxad00bai7lna8dpkwiv8khx8p20miy661abv956v"; + url = "https://developers.yubico.com/${pname}/Releases/${pname}-${version}.tar.gz"; + sha256 = "1izyl3as9rn7zcxpsvgngjwr55gli5gy822ac3ajzm65qiqkcbhb"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/libgnomekbd/default.nix b/pkgs/development/libraries/libgnomekbd/default.nix index 0951ab1fe0c..21523bf2e1a 100644 --- a/pkgs/development/libraries/libgnomekbd/default.nix +++ b/pkgs/development/libraries/libgnomekbd/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, file, intltool, glib, gtk3, libxklavier, makeWrapper, gnome3 }: +{ stdenv, fetchurl, pkgconfig, file, intltool, glib, gtk3, libxklavier, wrapGAppsHook, gnome3 }: stdenv.mkDerivation rec { pname = "libgnomekbd"; @@ -13,13 +13,19 @@ stdenv.mkDerivation rec { updateScript = gnome3.updateScript { packageName = pname; }; }; - nativeBuildInputs = [ pkgconfig file intltool makeWrapper ]; - buildInputs = [ glib gtk3 libxklavier ]; + nativeBuildInputs = [ + file + intltool + pkgconfig + wrapGAppsHook + ]; - preFixup = '' - wrapProgram $out/bin/gkbd-keyboard-display \ - --prefix XDG_DATA_DIRS : "$GSETTINGS_SCHEMAS_PATH" - ''; + # Requires in libgnomekbd.pc + propagatedBuildInputs = [ + gtk3 + libxklavier + glib + ]; meta = with stdenv.lib; { description = "Keyboard management library"; diff --git a/pkgs/development/libraries/libgnurl/default.nix b/pkgs/development/libraries/libgnurl/default.nix index dd7b91ffb9a..a1e8ef76394 100644 --- a/pkgs/development/libraries/libgnurl/default.nix +++ b/pkgs/development/libraries/libgnurl/default.nix @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A fork of libcurl used by GNUnet"; - homepage = https://gnunet.org/gnurl; + homepage = "https://gnunet.org/en/gnurl.html"; maintainers = with maintainers; [ falsifian vrthra ]; platforms = platforms.linux; license = licenses.curl; diff --git a/pkgs/development/libraries/libgpod/default.nix b/pkgs/development/libraries/libgpod/default.nix index c41f0a60d06..063588e9f1e 100644 --- a/pkgs/development/libraries/libgpod/default.nix +++ b/pkgs/development/libraries/libgpod/default.nix @@ -1,18 +1,20 @@ -{stdenv, lib, fetchurl, gettext, perlPackages, intltool, pkgconfig, glib, +{ stdenv, lib, fetchurl, gettext, perlPackages, intltool, pkgconfig, glib, libxml2, sqlite, zlib, sg3_utils, gdk-pixbuf, taglib, - libimobiledevice, python3Packages, mutagen, + libimobiledevice, mutagen, monoSupport ? false, mono, gtk-sharp-2_0 }: -let - inherit (python3Packages) python pygobject2; -in stdenv.mkDerivation rec { + +stdenv.mkDerivation rec { name = "libgpod-0.8.3"; + src = fetchurl { url = "mirror://sourceforge/gtkpod/${name}.tar.bz2"; sha256 = "0pcmgv1ra0ymv73mlj4qxzgyir026z9jpl5s5bkg35afs1cpk2k3"; }; + outputs = [ "out" "dev" ]; + preConfigure = "configureFlagsArray=( --with-udev-dir=$out/lib/udev )"; configureFlags = [ @@ -23,7 +25,7 @@ in stdenv.mkDerivation rec { dontStrip = true; propagatedBuildInputs = [ glib libxml2 sqlite zlib sg3_utils - gdk-pixbuf taglib libimobiledevice python pygobject2 mutagen ]; + gdk-pixbuf taglib libimobiledevice mutagen ]; nativeBuildInputs = [ gettext intltool pkgconfig ] ++ (with perlPackages; [ perl XMLParser ]) diff --git a/pkgs/development/libraries/libindicate/default.nix b/pkgs/development/libraries/libindicate/default.nix deleted file mode 100644 index 2d7cad84f21..00000000000 --- a/pkgs/development/libraries/libindicate/default.nix +++ /dev/null @@ -1,66 +0,0 @@ -# TODO: Resolve the issues with the Mono bindings. - -{ stdenv, fetchurl, lib, file -, pkgconfig, autoconf -, glib, dbus-glib, libdbusmenu -, gtkVersion ? "3", gtk2 ? null, gtk3 ? null -, python2Packages, gobject-introspection, vala, gnome-doc-utils -, monoSupport ? false, mono ? null, gtk-sharp-2_0 ? null - }: - -with lib; - -let - inherit (python2Packages) python pygobject2 pygtk; -in stdenv.mkDerivation rec { - name = let postfix = if gtkVersion == "2" && monoSupport then "sharp" else "gtk${gtkVersion}"; - in "libindicate-${postfix}-${version}"; - version = "${versionMajor}.${versionMinor}"; - versionMajor = "12.10"; - versionMinor = "1"; - - src = fetchurl { - url = "${meta.homepage}/${versionMajor}/${version}/+download/libindicate-${version}.tar.gz"; - sha256 = "10am0ymajx633b33anf6b79j37k61z30v9vaf5f9fwk1x5cw1q21"; - }; - - nativeBuildInputs = [ pkgconfig autoconf gobject-introspection vala gnome-doc-utils ]; - - buildInputs = [ - glib dbus-glib libdbusmenu - python pygobject2 pygtk - ] ++ (if gtkVersion == "2" - then [ gtk2 ] ++ optionals monoSupport [ mono gtk-sharp-2_0 ] - else [ gtk3 ]); - - postPatch = '' - substituteInPlace configure.ac \ - --replace '=codegendir pygtk-2.0' '=codegendir pygobject-2.0' \ - --replace 'pyglib-2.0-python$PYTHON_VERSION' 'pyglib-2.0-python' - autoconf - for f in {configure,ltmain.sh,m4/libtool.m4}; do - substituteInPlace $f \ - --replace /usr/bin/file ${file}/bin/file - done - ''; - - configureFlags = [ - "CFLAGS=-Wno-error" - "--sysconfdir=/etc" - "--localstatedir=/var" - "--with-gtk=${gtkVersion}" - ]; - - installFlags = [ - "sysconfdir=\${out}/etc" - "localstatedir=\${TMPDIR}" - ]; - - meta = { - description = "Library for raising indicators via DBus"; - homepage = https://launchpad.net/libindicate; - license = with licenses; [ lgpl21 lgpl3 ]; - platforms = platforms.linux; - maintainers = [ maintainers.msteen ]; - }; -} diff --git a/pkgs/development/libraries/liblouis/default.nix b/pkgs/development/libraries/liblouis/default.nix index 0f73be7ebce..932edd20e9a 100644 --- a/pkgs/development/libraries/liblouis/default.nix +++ b/pkgs/development/libraries/liblouis/default.nix @@ -12,13 +12,13 @@ stdenv.mkDerivation rec { pname = "liblouis"; - version = "3.11.0"; + version = "3.12.0"; src = fetchFromGitHub { owner = "liblouis"; repo = "liblouis"; rev = "v${version}"; - sha256 = "1y0pypgxchxczdnjkblibbvvy4gdk2pf8dzpqmbf824c7zpy8z5r"; + sha256 = "0sw7iwb9158z7jslxj9jwh2vqbg0q8wq6fbmk9iz7sfkjqhi80hv"; }; outputs = [ "out" "dev" "man" "info" "doc" ]; diff --git a/pkgs/development/libraries/libmad/default.nix b/pkgs/development/libraries/libmad/default.nix index 40d90f46288..9d935daddad 100644 --- a/pkgs/development/libraries/libmad/default.nix +++ b/pkgs/development/libraries/libmad/default.nix @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { ++ stdenv.lib.optionals stdenv.cc.isClang [ (fetchpatch { url = "https://github.com/KaOSx/main/raw/1270b8080f37fb6cca562829a521991800b0a497/libmad/optimize.diff"; - sha256 = "0ciyaj1acg08g8hpzqx6whayq206fvf4whksz2pjgxlv207lqgjh"; + sha256 = "1wp60ywzk6nmxc3kq3v6i8b7s4cibvf5cjir859zv10y5aa1d0pk"; }) ]; diff --git a/pkgs/development/libraries/libmaxminddb/default.nix b/pkgs/development/libraries/libmaxminddb/default.nix index 2fa162b7e8b..5cf12ea46ba 100644 --- a/pkgs/development/libraries/libmaxminddb/default.nix +++ b/pkgs/development/libraries/libmaxminddb/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "libmaxminddb"; - version = "1.3.2"; + version = "1.4.2"; src = fetchurl { url = meta.homepage + "/releases/download/${version}/${pname}-${version}.tar.gz"; - sha256 = "1w60yq26x3yr3abxk7fwqqaggw8dc98595jdliaa3kyqdfm83y76"; + sha256 = "0mnimbaxnnarlw7g1rh8lpxsyf7xnmzwcczcc3lxw8xyf6ljln6x"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libminc/default.nix b/pkgs/development/libraries/libminc/default.nix index aea7a5959fa..53b6af40b51 100644 --- a/pkgs/development/libraries/libminc/default.nix +++ b/pkgs/development/libraries/libminc/default.nix @@ -1,17 +1,16 @@ { stdenv, fetchFromGitHub, cmake, zlib, netcdf, nifticlib, hdf5 }: stdenv.mkDerivation rec { - pname = "libminc"; - name = "${pname}-2018-01-17"; + pname = "libminc"; + version = "2.4.03"; owner = "BIC-MNI"; - # current master is significantly ahead of most recent release, so use Git version: src = fetchFromGitHub { inherit owner; repo = pname; - rev = "a9cbe1353eae9791b7d5b03af16e0f86922ce40b"; - sha256 = "0mn4n3ihzcr1jw2g1vy6c8p4lkc88jwljk04argmj7k4djrgpxpa"; + rev = "release-${version}"; + sha256 = "0kpmqs9df836ywsqj749qbsfavf5bnldblxrmnmxqq9pywc8yfrm"; }; postPatch = '' @@ -27,7 +26,7 @@ stdenv.mkDerivation rec { "-DLIBMINC_USE_SYSTEM_NIFTI=ON" ]; - doCheck = true; + doCheck = !stdenv.isDarwin; checkPhase = '' export LD_LIBRARY_PATH="$(pwd)" # see #22060 ctest -E 'ezminc_rw_test|minc_conversion' --output-on-failure diff --git a/pkgs/development/libraries/libndctl/default.nix b/pkgs/development/libraries/libndctl/default.nix index bfff0c84522..613103db69f 100644 --- a/pkgs/development/libraries/libndctl/default.nix +++ b/pkgs/development/libraries/libndctl/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "libndctl"; - version = "66"; + version = "67"; src = fetchFromGitHub { owner = "pmem"; repo = "ndctl"; rev = "v${version}"; - sha256 = "1pq1ss6b1lnyfnvdfhpi0x70jjrnm567fcyvkgvhmp2ndzsn393f"; + sha256 = "076jgw1g2aafqgnq705in0wnabysqk46dq5yxdv1qzgjmyhka39n"; }; outputs = [ "out" "lib" "man" "dev" ]; diff --git a/pkgs/development/libraries/libnftnl/default.nix b/pkgs/development/libraries/libnftnl/default.nix index 815ed3a6bd4..a4f98eed417 100644 --- a/pkgs/development/libraries/libnftnl/default.nix +++ b/pkgs/development/libraries/libnftnl/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pkgconfig, libmnl }: stdenv.mkDerivation rec { - version = "1.1.4"; + version = "1.1.5"; pname = "libnftnl"; src = fetchurl { url = "https://netfilter.org/projects/${pname}/files/${pname}-${version}.tar.bz2"; - sha256 = "087dfc2n4saf2k68hyi4byvgz5grwpw5kfjvmkpn3wmd8y1riiy8"; + sha256 = "1wqlxf76bkqf3qhka9sw32qhb2ni20q1k6rn3iril2kw482lvpk6"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libnotify/default.nix b/pkgs/development/libraries/libnotify/default.nix index d4ac3ae8dc9..59039aadb89 100644 --- a/pkgs/development/libraries/libnotify/default.nix +++ b/pkgs/development/libraries/libnotify/default.nix @@ -1,5 +1,14 @@ -{ stdenv, fetchurl, meson, ninja, pkgconfig, fetchpatch -, glib, gdk-pixbuf, gobject-introspection, gnome3 }: +{ stdenv +, fetchurl +, meson +, ninja +, pkgconfig +, fetchpatch +, glib +, gdk-pixbuf +, gobject-introspection +, gnome3 +}: stdenv.mkDerivation rec { pname = "libnotify"; @@ -26,8 +35,17 @@ stdenv.mkDerivation rec { "-Dgtk_doc=false" ]; - nativeBuildInputs = [ meson ninja pkgconfig gobject-introspection ]; - buildInputs = [ glib gdk-pixbuf ]; + nativeBuildInputs = [ + gobject-introspection + meson + ninja + pkgconfig + ]; + + propagatedBuildInputs = [ + gdk-pixbuf + glib + ]; passthru = { updateScript = gnome3.updateScript { @@ -40,6 +58,7 @@ stdenv.mkDerivation rec { homepage = https://developer.gnome.org/notification-spec/; description = "A library that sends desktop notifications to a notification daemon"; platforms = platforms.unix; + maintainers = gnome3.maintainers; license = licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/libofx/default.nix b/pkgs/development/libraries/libofx/default.nix index 6723c08f082..76276f0ce0f 100644 --- a/pkgs/development/libraries/libofx/default.nix +++ b/pkgs/development/libraries/libofx/default.nix @@ -1,23 +1,27 @@ -{ stdenv, fetchurl, opensp, pkgconfig, libxml2, curl }: - +{ stdenv, fetchFromGitHub, opensp, pkgconfig, libxml2, curl +, autoconf, automake, libtool, gengetopt, libiconv }: + stdenv.mkDerivation rec { - name = "libofx-0.9.14"; + pname = "libofx"; + version = "0.9.15"; - src = fetchurl { - url = "mirror://sourceforge/libofx/${name}.tar.gz"; - sha256 = "02i9zxkp66yxjpjay5dscfh53bz5vxy03zcxncpw09svl6zmf9xq"; + src = fetchFromGitHub { + owner = "LibOFX"; + repo = pname; + rev = version; + sha256 = "1jx56ma351p8af8dvavygjwf6ipa7qbgq7bpdsymwj27apdnixfy"; }; + preConfigure = "./autogen.sh"; configureFlags = [ "--with-opensp-includes=${opensp}/include/OpenSP" ]; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ opensp libxml2 curl ]; + nativeBuildInputs = [ pkgconfig libtool autoconf automake gengetopt ]; + buildInputs = [ opensp libxml2 curl ] ++ stdenv.lib.optional stdenv.isDarwin libiconv; meta = { description = "Opensource implementation of the Open Financial eXchange specification"; homepage = http://libofx.sourceforge.net/; license = "LGPL"; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; maintainers = [ ]; }; } - diff --git a/pkgs/development/libraries/libosmium/default.nix b/pkgs/development/libraries/libosmium/default.nix index 8005fb9dbbe..e6abe620aaf 100644 --- a/pkgs/development/libraries/libosmium/default.nix +++ b/pkgs/development/libraries/libosmium/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libosmium"; - version = "2.15.3"; + version = "2.15.4"; src = fetchFromGitHub { owner = "osmcode"; repo = "libosmium"; rev = "v${version}"; - sha256 = "14xpzac93f8pqjkz1r0ckqv8h691z5p6pd06wn8ib1aryzc7ps97"; + sha256 = "0mlcvqrhp40bzj5r5j9nfc5vbis8hmzcq9xi8jylkciyydaynhz4"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/libqalculate/default.nix b/pkgs/development/libraries/libqalculate/default.nix index 4ba976a9fb8..d369eebd88f 100644 --- a/pkgs/development/libraries/libqalculate/default.nix +++ b/pkgs/development/libraries/libqalculate/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "libqalculate"; - version = "3.5.0"; + version = "3.6.0"; src = fetchFromGitHub { owner = "qalculate"; repo = "libqalculate"; rev = "v${version}"; - sha256 = "0jfi9h8wsj7h5z3dxdijq6ddxiygik9j86pjxl3hza4v2ilsbwy3"; + sha256 = "0qfdgxb46c18cp43z67n986xhj6x0sa95hryq42spf1p5ymbylqy"; }; outputs = [ "out" "dev" "doc" ]; diff --git a/pkgs/development/libraries/librsvg/default.nix b/pkgs/development/libraries/librsvg/default.nix index e9a67c5d059..11c7f3fed84 100644 --- a/pkgs/development/libraries/librsvg/default.nix +++ b/pkgs/development/libraries/librsvg/default.nix @@ -4,14 +4,14 @@ let pname = "librsvg"; - version = "2.46.3"; + version = "2.46.4"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "1s3a96i7f4pynjwxxvhysp4b6r7kyi8nasdxfyi62hc7gm34d3kn"; + sha256 = "0afc82nsxc6kw136xid4vcq9kmq4rmgzzk8bh2pvln2cnvirwnxl"; }; outputs = [ "out" "dev" "installedTests" ]; diff --git a/pkgs/development/libraries/libsexy/default.nix b/pkgs/development/libraries/libsexy/default.nix deleted file mode 100644 index cb22d9f97bc..00000000000 --- a/pkgs/development/libraries/libsexy/default.nix +++ /dev/null @@ -1,24 +0,0 @@ -{ stdenv, fetchurl, pkgconfig -, glib, gtk2, libxml2, pango -}: - -stdenv.mkDerivation { - name = "libsexy-0.1.11"; - - src = fetchurl { - url = http://releases.chipx86.com/libsexy/libsexy/libsexy-0.1.11.tar.gz; - sha256 = "8c4101a8cda5fccbba85ba1a15f46f2cf75deaa8b3c525ce5b135b9e1a8fe49e"; - }; - - nativeBuildInputs = [ pkgconfig ]; - - buildInputs = [ glib gtk2 libxml2 pango ]; - - meta = with stdenv.lib; { - description = "A collection of GTK widgets"; - homepage = https://blog.chipx86.com/tag/libsexy/; - license = licenses.lgpl21; - maintainers = with maintainers; [ ]; - platforms = platforms.unix; - }; -} diff --git a/pkgs/development/libraries/libsoup/default.nix b/pkgs/development/libraries/libsoup/default.nix index 7c4772c9cf1..2d2f2da6a39 100644 --- a/pkgs/development/libraries/libsoup/default.nix +++ b/pkgs/development/libraries/libsoup/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "libsoup"; - version = "2.68.2"; + version = "2.68.3"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0crr9qprmacr626fx83cx81ggk85zsgxr4mn577kpzj6m40k1bai"; + sha256 = "1yxs0ax4rq3g0lgkbv7mz497rqj16iyyizddyc13gzxh6n7b0jsk"; }; postPatch = '' diff --git a/pkgs/development/libraries/libspectrum/default.nix b/pkgs/development/libraries/libspectrum/default.nix new file mode 100644 index 00000000000..c09a45abf59 --- /dev/null +++ b/pkgs/development/libraries/libspectrum/default.nix @@ -0,0 +1,24 @@ +{ lib, stdenv, fetchurl, perl, pkgconfig, audiofile, bzip2, glib, libgcrypt, zlib }: + +stdenv.mkDerivation rec { + name = "libspectrum-1.4.4"; + + src = fetchurl { + url = "mirror://sourceforge/fuse-emulator/${name}.tar.gz"; + sha256 = "1cc0jx617sym6qj1f9fm115q44cq5azsxplqq2cgrg0pmlmjpyzx"; + }; + + nativeBuildInputs = [ perl pkgconfig ]; + + buildInputs = [ audiofile bzip2 glib libgcrypt zlib ]; + + enableParallelBuilding = true; + + meta = with lib; { + homepage = http://fuse-emulator.sourceforge.net/libspectrum.php; + description = "ZX Spectrum input and output support library"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ orivej ]; + }; +} diff --git a/pkgs/development/libraries/libuv/default.nix b/pkgs/development/libraries/libuv/default.nix index 3c4f90edecc..524896b8bfd 100644 --- a/pkgs/development/libraries/libuv/default.nix +++ b/pkgs/development/libraries/libuv/default.nix @@ -1,14 +1,14 @@ { stdenv, lib, fetchFromGitHub, autoconf, automake, libtool, pkgconfig, ApplicationServices, CoreServices }: stdenv.mkDerivation rec { - version = "1.33.1"; + version = "1.34.0"; pname = "libuv"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "13w60g9pc6998v8plslwpwn7f1hx3c1y4zhgmw025nyd504h5lak"; + sha256 = "0vcrrqf0zqgsfmgbyl45qhajyab98kxqq66l0w4lkj5say86aln8"; }; postPatch = let diff --git a/pkgs/development/libraries/mbedtls/1.3.nix b/pkgs/development/libraries/mbedtls/1.3.nix deleted file mode 100644 index 8b8d8cd0be8..00000000000 --- a/pkgs/development/libraries/mbedtls/1.3.nix +++ /dev/null @@ -1,34 +0,0 @@ -{ stdenv, fetchurl, perl }: - -stdenv.mkDerivation rec { - name = "mbedtls-1.3.22"; - - src = fetchurl { - url = "https://tls.mbed.org/download/${name}-gpl.tgz"; - sha256 = "0ms4s41z88mz7b6gsnp7jslms4v0115k7gw51i6kx6ng9am43l6y"; - }; - - nativeBuildInputs = [ perl ]; - - postPatch = '' - patchShebangs . - ''; - - makeFlags = [ - "SHARED=1" - ]; - - installFlags = [ - "DESTDIR=\${out}" - ]; - - doCheck = true; - - meta = with stdenv.lib; { - homepage = https://tls.mbed.org/; - description = "Portable cryptographic and SSL/TLS library, aka polarssl"; - license = licenses.gpl3; - platforms = platforms.all; - maintainers = with maintainers; [ fpletz ]; - }; -} diff --git a/pkgs/development/libraries/mesa/default.nix b/pkgs/development/libraries/mesa/default.nix index 2ebd5893e62..9582e1bf1bf 100644 --- a/pkgs/development/libraries/mesa/default.nix +++ b/pkgs/development/libraries/mesa/default.nix @@ -27,7 +27,7 @@ with stdenv.lib; let - version = "19.2.6"; + version = "19.2.7"; branch = versions.major version; in @@ -42,7 +42,7 @@ stdenv.mkDerivation { "ftp://ftp.freedesktop.org/pub/mesa/older-versions/${branch}.x/${version}/mesa-${version}.tar.xz" "https://mesa.freedesktop.org/archive/mesa-${version}.tar.xz" ]; - sha256 = "15vpj2v1j5j065f8syhcsyr6rkjm58250r0ri13v6bf8c3x28ywx"; + sha256 = "17jp8ghipgz62vqqz5llskxypkcmgf8gnlgnj0pyvnbgi6vryyg3"; }; prePatch = "patchShebangs ."; diff --git a/pkgs/development/libraries/mimalloc/default.nix b/pkgs/development/libraries/mimalloc/default.nix index 2d38d7e5394..b3f63ec7e9b 100644 --- a/pkgs/development/libraries/mimalloc/default.nix +++ b/pkgs/development/libraries/mimalloc/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, cmake, ninja -, secureBuild ? true +, secureBuild ? false }: let @@ -25,17 +25,21 @@ stdenv.mkDerivation rec { mkdir -p $dev mv $out/lib/*/include $dev/include - # move everything else into place - mv $out/lib/mimalloc-1.0/libmimalloc*${soext}.1.0 $out/lib/libmimalloc${soext} + # move .a and .o files into place mv $out/lib/mimalloc-1.0/libmimalloc*.a $out/lib/libmimalloc.a mv $out/lib/mimalloc-1.0/mimalloc*.o $out/lib/mimalloc.o + '' + (if secureBuild then '' + mv $out/lib/mimalloc-1.0/libmimalloc-secure${soext}.1.0 $out/lib/libmimalloc-secure${soext}.1.0 + ln -sfv $out/lib/libmimalloc-secure${soext}.1.0 $out/lib/libmimalloc-secure${soext} + ln -sfv $out/lib/libmimalloc-secure${soext}.1.0 $out/lib/libmimalloc${soext} + '' else '' + mv $out/lib/mimalloc-1.0/libmimalloc${soext}.1.0 $out/lib/libmimalloc${soext}.1.0 + ln -sfv $out/lib/libmimalloc${soext}.1.0 $out/lib/libmimalloc${soext} + '') + '' # remote duplicate dir. FIXME: try to fix the .cmake file distribution # so we can re-use it for dependencies... rm -rf $out/lib/mimalloc-1.0 - '' + stdenv.lib.optionalString secureBuild '' - # fix a broken symlink for the -secure alias - ln -sfv $out/lib/libmimalloc.so $out/lib/libmimalloc-secure.so ''; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/nco/default.nix b/pkgs/development/libraries/nco/default.nix index c842eac4311..14b608bb994 100644 --- a/pkgs/development/libraries/nco/default.nix +++ b/pkgs/development/libraries/nco/default.nix @@ -1,20 +1,21 @@ -{ stdenv, fetchurl, netcdf, netcdfcxx4, gsl, udunits, antlr, which, curl, flex }: +{ stdenv, fetchzip, netcdf, netcdfcxx4, gsl, udunits, antlr, which, curl, flex }: stdenv.mkDerivation rec { - version = "4.8.1"; + version = "4.9.0"; pname = "nco"; - buildInputs = [ netcdf netcdfcxx4 gsl udunits antlr which curl flex ]; + nativeBuildInputs = [ flex which ]; + buildInputs = [ netcdf netcdfcxx4 gsl udunits antlr curl ]; - src = fetchurl { + src = fetchzip { url = "https://github.com/nco/nco/archive/${version}.tar.gz"; - sha256 = "0s1ww78p4cb2d9qkr4zs439x4xk3ndq6lv8ps677jrn28vnkzbnx"; + sha256 = "0k371b1w369dchmxskd9191i1p47xcwxqwbxsgmdhs8n477wj74b"; }; meta = { description = "NetCDF Operator toolkit"; longDescription = "The NCO (netCDF Operator) toolkit manipulates and analyzes data stored in netCDF-accessible formats, including DAP, HDF4, and HDF5"; - homepage = http://nco.sourceforge.net/; + homepage = "http://nco.sourceforge.net/"; license = stdenv.lib.licenses.gpl3; maintainers = [ stdenv.lib.maintainers.bzizou ]; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/development/libraries/nghttp2/default.nix b/pkgs/development/libraries/nghttp2/default.nix index 04018f0e80b..57ed5891275 100644 --- a/pkgs/development/libraries/nghttp2/default.nix +++ b/pkgs/development/libraries/nghttp2/default.nix @@ -20,11 +20,11 @@ let inherit (stdenv.lib) optional; in stdenv.mkDerivation rec { pname = "nghttp2"; - version = "1.39.2"; + version = "1.40.0"; src = fetchurl { url = "https://github.com/${pname}/${pname}/releases/download/v${version}/${pname}-${version}.tar.bz2"; - sha256 = "1l51q8xqg7d7y9413z8l0scxgbbl1qkwgq4f09jqb31j492kx8lj"; + sha256 = "0kyrgd4s2pq51ps5z385kw1hn62m8qp7c4h6im0g4ibrf89qwxc2"; }; outputs = [ "bin" "out" "dev" "lib" ]; diff --git a/pkgs/development/libraries/nspr/default.nix b/pkgs/development/libraries/nspr/default.nix index 23587cbef6b..44195ce325b 100644 --- a/pkgs/development/libraries/nspr/default.nix +++ b/pkgs/development/libraries/nspr/default.nix @@ -2,7 +2,7 @@ , CoreServices ? null , buildPackages }: -let version = "4.23"; in +let version = "4.24"; in stdenv.mkDerivation { pname = "nspr"; @@ -10,7 +10,7 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://mozilla/nspr/releases/v${version}/src/nspr-${version}.tar.gz"; - sha256 = "193p6i2r6wvpb4i04a9pxbqkxcn8rbcmwl81m4yp5xgs6w8857ab"; + sha256 = "1l0ksiny032jijgk0g76wf0kiq673i01izj7jrs2h5d1yq6rm9ch"; }; patches = [ diff --git a/pkgs/development/libraries/openh264/default.nix b/pkgs/development/libraries/openh264/default.nix index cd91a132597..fe46d25421a 100644 --- a/pkgs/development/libraries/openh264/default.nix +++ b/pkgs/development/libraries/openh264/default.nix @@ -2,25 +2,23 @@ stdenv.mkDerivation rec { pname = "openh264"; - version = "1.8.0"; + version = "2.0.0"; src = fetchFromGitHub { owner = "cisco"; - repo = "openh264"; + repo = pname; rev = "v${version}"; - sha256 = "1pl7hpk25nh7lcx1lbbv984gvnim0d6hxf4qfmrjjfjf6w37sjw4"; + sha256 = "0sa4n4xshmiiv6h767jjq9qxapxxjwwwm3bpcignkxv5xn5sls5r"; }; - buildInputs = [ nasm ]; + nativeBuildInputs = [ nasm ]; - installPhase = '' - make PREFIX=$out install - ''; + makeFlags = [ "PREFIX=${placeholder "out"}" ]; meta = with stdenv.lib; { description = "A codec library which supports H.264 encoding and decoding"; - homepage = http://www.openh264.org; - license = stdenv.lib.licenses.bsd2; + homepage = "https://www.openh264.org"; + license = licenses.bsd2; platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/pango/default.nix b/pkgs/development/libraries/pango/default.nix index 9f1e7d5c2fc..ecb0f16c72c 100644 --- a/pkgs/development/libraries/pango/default.nix +++ b/pkgs/development/libraries/pango/default.nix @@ -9,13 +9,13 @@ with stdenv.lib; let pname = "pango"; - version = "1.43.0"; + version = "1.44.7"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "1lnxldmv1a12dq5h0dlq5jyzl4w75k76dp8cn360x2ijlm9w5h6j"; + sha256 = "07qvxa2sk90chp1l12han6vxvy098mc37sdqcznyywyv2g6bd9b6"; }; # FIXME: docs fail on darwin @@ -26,31 +26,18 @@ in stdenv.mkDerivation rec { pkgconfig gobject-introspection gtk-doc docbook_xsl docbook_xml_dtd_43 ]; buildInputs = [ - harfbuzz fribidi + fribidi ] ++ optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ ApplicationServices Carbon CoreGraphics CoreText ]); - propagatedBuildInputs = [ cairo glib libintl ] ++ + propagatedBuildInputs = [ cairo glib libintl harfbuzz ] ++ optional x11Support libXft; - patches = [ - (fetchpatch { - # Add gobject-2 to .pc file - url = "https://gitlab.gnome.org/GNOME/pango/commit/546f4c242d6f4fe312de3b7c918a848e5172e18d.patch"; - sha256 = "1cqhy4xbwx3ad7z5d1ks7smf038b9as8c6qy84rml44h0fgiq4m2"; - }) - (fetchpatch { - # Fixes CVE-2019-1010238 - url = "https://gitlab.gnome.org/GNOME/pango/commit/490f8979a260c16b1df055eab386345da18a2d54.diff"; - sha256 = "1s0qclbaknkx3dkc3n6mlmx3fnhlr2pkncqjkywprpvahmmypr7k"; - }) - ]; - mesonFlags = [ - "-Denable_docs=${if stdenv.isDarwin then "false" else "true"}" + "-Dgtk_doc=${if stdenv.isDarwin then "false" else "true"}" ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/pcaudiolib/default.nix b/pkgs/development/libraries/pcaudiolib/default.nix index 5a02229cb0e..1831d969249 100644 --- a/pkgs/development/libraries/pcaudiolib/default.nix +++ b/pkgs/development/libraries/pcaudiolib/default.nix @@ -3,15 +3,15 @@ , portaudio, alsaLib , pulseaudioSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio }: -stdenv.mkDerivation { +stdenv.mkDerivation rec { pname = "pcaudiolib"; - version = "2016-07-19"; + version = "1.1"; src = fetchFromGitHub { owner = "rhdunn"; repo = "pcaudiolib"; - rev = "4f836ea909bdaa8a6e0e89c587efc745b546b459"; - sha256 = "0z99nh4ibb9md2cd21762n1dmv6jk988785s1cxd8lsy4hp4pwfa"; + rev = "${version}"; + sha256 = "0c55hlqqh0m7bcb3nlgv1s4a22s5bgczr1cakjh3767rjb10khi0"; }; nativeBuildInputs = [ autoconf automake which libtool pkgconfig ]; diff --git a/pkgs/development/libraries/physics/herwig/default.nix b/pkgs/development/libraries/physics/herwig/default.nix index d252e62286b..d52f92d9639 100644 --- a/pkgs/development/libraries/physics/herwig/default.nix +++ b/pkgs/development/libraries/physics/herwig/default.nix @@ -2,18 +2,18 @@ stdenv.mkDerivation rec { pname = "herwig"; - version = "7.1.5"; + version = "7.2.0"; src = fetchurl { url = "https://www.hepforge.org/archive/herwig/Herwig-${version}.tar.bz2"; - sha256 = "0jnrv59zfa41gc37pqr3vaiz5jkh7w0k0alcax37b3mlbsnacr9r"; + sha256 = "0r5iyai2j99pk9p36g4rp98bxm55zd1ik9kgm2zf5zgpvxfm8csr"; }; nativeBuildInputs = [ autoconf automake libtool ]; buildInputs = [ boost fastjet gfortran gsl thepeg zlib ] - # There is a bug that requires for MMHT PDF's to be presend during the build - ++ (with lhapdf.pdf_sets; [ MMHT2014lo68cl MMHT2014nlo68cl ]); + # There is a bug that requires for default PDF's to be present during the build + ++ (with lhapdf.pdf_sets; [ CT14lo CT14nlo ]); postPatch = '' patchShebangs ./ @@ -25,12 +25,12 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - meta = { + meta = with stdenv.lib; { description = "A multi-purpose particle physics event generator"; - license = stdenv.lib.licenses.gpl2; - homepage = https://herwig.hepforge.org/; - platforms = stdenv.lib.platforms.unix; - maintainers = with stdenv.lib.maintainers; [ veprbl ]; - broken = stdenv.isAarch64; # doesn't compile: ignoring return value of 'FILE* freopen... + homepage = https://herwig.hepforge.org/; + license = licenses.gpl3; + maintainers = with maintainers; [ veprbl ]; + platforms = platforms.unix; + broken = stdenv.isAarch64; # doesn't compile: ignoring return value of 'FILE* freopen... }; } diff --git a/pkgs/development/libraries/physics/rivet/default.nix b/pkgs/development/libraries/physics/rivet/default.nix index 914eee5c286..95e44f2364c 100644 --- a/pkgs/development/libraries/physics/rivet/default.nix +++ b/pkgs/development/libraries/physics/rivet/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, fastjet, ghostscript, gsl, hepmc2, imagemagick, less, python2, texlive, yoda, which, makeWrapper }: +{ stdenv, fetchurl, fetchpatch, fastjet, ghostscript, gsl, hepmc2, imagemagick, less, python2, texlive, yoda, which, makeWrapper }: stdenv.mkDerivation rec { pname = "rivet"; @@ -11,6 +11,10 @@ stdenv.mkDerivation rec { patches = [ ./darwin.patch # configure relies on impure sw_vers to -Dunix + (fetchpatch { + url = "https://phab-files.hepforge.org/file/data/j3ja4jirrdyrovrmnbuh/PHID-FILE-6vnor4aoz3s2ejruisrg/file"; + sha256 = "0flxv08wcd0m5di75s2zvm015k2k70nqgpcgcbq7m604z26pd6ab"; + }) ]; latex = texlive.combine { inherit (texlive) diff --git a/pkgs/development/libraries/physics/thepeg/default.nix b/pkgs/development/libraries/physics/thepeg/default.nix index fa293eab350..15c94668581 100644 --- a/pkgs/development/libraries/physics/thepeg/default.nix +++ b/pkgs/development/libraries/physics/thepeg/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "thepeg"; - version = "2.1.5"; + version = "2.2.0"; src = fetchurl { url = "https://www.hepforge.org/archive/thepeg/ThePEG-${version}.tar.bz2"; - sha256 = "1rmmwhk9abn9mc9j3127axjwpvymv21ld4wcivwz01pldkxh06n6"; + sha256 = "1y7vwsc4zk629np4rpjh7a8qzvyqc2fixnwq98dgdndp2544gqfk"; }; buildInputs = [ boost fastjet gsl hepmc2 lhapdf rivet zlib ]; @@ -19,11 +19,11 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - meta = { + meta = with stdenv.lib; { description = "Toolkit for High Energy Physics Event Generation"; - license = stdenv.lib.licenses.gpl2; - homepage = https://herwig.hepforge.org/; - platforms = stdenv.lib.platforms.unix; - maintainers = with stdenv.lib.maintainers; [ veprbl ]; + homepage = https://herwig.hepforge.org/; + license = licenses.gpl3; + maintainers = with maintainers; [ veprbl ]; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/qpdf/default.nix b/pkgs/development/libraries/qpdf/default.nix index 5cdde468416..68362be596b 100644 --- a/pkgs/development/libraries/qpdf/default.nix +++ b/pkgs/development/libraries/qpdf/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, libjpeg, zlib, perl }: -let version = "9.0.2"; +let version = "9.1.0"; in stdenv.mkDerivation rec { pname = "qpdf"; @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/qpdf/qpdf/${version}/${pname}-${version}.tar.gz"; - sha256 = "0b6jhhsifgiwrznxxi3h7hqm7bi91wph65jjbvs4g2860vcm296h"; + sha256 = "0ygd80wxcmh613n04x2kmf8wlsl0drxyd5wwdcrm1rzj0xwvpfrs"; }; nativeBuildInputs = [ perl ]; diff --git a/pkgs/development/libraries/qt-5/hooks/wrap-qt-apps-hook.sh b/pkgs/development/libraries/qt-5/hooks/wrap-qt-apps-hook.sh index f591ef2fb42..7356c8ee356 100644 --- a/pkgs/development/libraries/qt-5/hooks/wrap-qt-apps-hook.sh +++ b/pkgs/development/libraries/qt-5/hooks/wrap-qt-apps-hook.sh @@ -73,7 +73,7 @@ wrapQtAppsHook() { [ -z "$wrapQtAppsHookHasRun" ] || return 0 wrapQtAppsHookHasRun=1 - local targetDirs=( "$prefix/bin" "$prefix/libexec" ) + local targetDirs=( "$prefix/bin" "$prefix/sbin" "$prefix/libexec" ) echo "wrapping Qt applications in ${targetDirs[@]}" for targetDir in "${targetDirs[@]}" diff --git a/pkgs/development/libraries/rabbitmq-c/default.nix b/pkgs/development/libraries/rabbitmq-c/default.nix index fe48d99b383..487de0976bd 100644 --- a/pkgs/development/libraries/rabbitmq-c/default.nix +++ b/pkgs/development/libraries/rabbitmq-c/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "rabbitmq-c"; - version = "0.9.0"; + version = "0.10.0"; src = fetchFromGitHub { owner = "alanxz"; repo = "rabbitmq-c"; rev = "v${version}"; - sha256 = "1mhzxyh9pmpxjjbyy8hd34gm39sxf73r1ldk8zjfsfbs26ggrppz"; + sha256 = "1iv7aww4pam8497s524xjxbbxypyqd01qgrb0b429y3q9x06m4sw"; }; buildInputs = [ cmake openssl popt xmlto ]; diff --git a/pkgs/development/libraries/randomx/default.nix b/pkgs/development/libraries/randomx/default.nix index 79ce9e41324..9e6cdfecb95 100644 --- a/pkgs/development/libraries/randomx/default.nix +++ b/pkgs/development/libraries/randomx/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "randomX"; - version = "1.1.6"; + version = "1.1.7"; nativeBuildInputs = [ cmake ]; @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { owner = "tevador"; repo = pname; rev = "v${version}"; - sha256 = "1qd0rbzgxdy87wwy0n6ca29bcq25j5ndnfgmx8iyf225m4rcwngf"; + sha256 = "1d42dw4zrd7mzfqs6gwk27jj6lsh6pwv85p1ckx9dxy8mw3m52ah"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/range-v3/default.nix b/pkgs/development/libraries/range-v3/default.nix index f02093001e4..56c5754831e 100644 --- a/pkgs/development/libraries/range-v3/default.nix +++ b/pkgs/development/libraries/range-v3/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "range-v3"; - version = "0.9.1"; + version = "0.10.0"; src = fetchFromGitHub { owner = "ericniebler"; repo = "range-v3"; rev = version; - sha256 = "0qga2fnfrlrzrvnnk1z1plpmvcr8b4c75g5xz0jv0sav0kmq5zwn"; + sha256 = "1h9h5j7pdi0afpip9ncq76h1xjhvb8bnm585q17afz2l4fydy8qj"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/rdkafka/default.nix b/pkgs/development/libraries/rdkafka/default.nix index f0513c28934..cb1b176ce35 100644 --- a/pkgs/development/libraries/rdkafka/default.nix +++ b/pkgs/development/libraries/rdkafka/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "rdkafka"; - version = "1.2.2"; + version = "1.3.0"; src = fetchFromGitHub { owner = "edenhill"; repo = "librdkafka"; rev = "v${version}"; - sha256 = "1daikjr2wcjxcys41hfw3vg2mqk6cy297pfcl05s90wnjvd7fkqk"; + sha256 = "1arwpvva2b1m3yd618s59v38gwsi0nnm07g6yc9dapcgxrkg5n0h"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/science/math/brial/default.nix b/pkgs/development/libraries/science/math/brial/default.nix index f08f6425655..56a78b00cd6 100644 --- a/pkgs/development/libraries/science/math/brial/default.nix +++ b/pkgs/development/libraries/science/math/brial/default.nix @@ -8,14 +8,14 @@ }: stdenv.mkDerivation rec { - version = "1.2.5"; + version = "1.2.6"; pname = "brial"; src = fetchFromGitHub { owner = "BRiAl"; repo = "BRiAl"; rev = version; - sha256 = "1nv56fp3brpzanxj7vwvxqdafqfsfhdgq5imr3m94psw5gdfqwja"; + sha256 = "1mc1zjr3mxcx6bg0js5k9jx65japg7644b0aj1al75m4nwh2ygab"; }; # FIXME package boost-test and enable checks diff --git a/pkgs/development/libraries/sentencepiece/default.nix b/pkgs/development/libraries/sentencepiece/default.nix new file mode 100644 index 00000000000..556f77ef8b5 --- /dev/null +++ b/pkgs/development/libraries/sentencepiece/default.nix @@ -0,0 +1,31 @@ +{ config +, fetchFromGitHub +, stdenv +, lib +, cmake +, gperftools +}: + +stdenv.mkDerivation rec { + pname = "sentencepiece"; + version = "0.1.84"; + + src = fetchFromGitHub { + owner = "google"; + repo = pname; + rev = "v${version}"; + sha256 = "144y25nj4rwxmgvzqbr7al9fjwh3539ssjswvzrx4gsgfk62lsm0"; + }; + + enableParallelBuilding = true; + + nativeBuildInputs = [ cmake gperftools ]; + + meta = with stdenv.lib; { + homepage = https://github.com/google/sentencepiece; + description = "Unsupervised text tokenizer for Neural Network-based text generation"; + license = licenses.asl20; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ pashashocky ]; + }; +} diff --git a/pkgs/development/libraries/sonic/default.nix b/pkgs/development/libraries/sonic/default.nix index 4a744c08ae3..3e93302f3d7 100644 --- a/pkgs/development/libraries/sonic/default.nix +++ b/pkgs/development/libraries/sonic/default.nix @@ -1,20 +1,22 @@ -{ stdenv, fetchFromGitHub }: +{ stdenv, fetchFromGitHub, fftw }: stdenv.mkDerivation { pname = "sonic"; - version = "2016-03-01"; + version = "2018-07-06"; src = fetchFromGitHub { owner = "waywardgeek"; repo = "sonic"; - rev = "71bdf26c55716a45af50c667c0335a9519e952dd"; - sha256 = "1kcl8fdf92kafmfhvyjal5gvkn99brkjyzbi9gw3rd5b30m3xz2b"; + rev = "71c51195de71627d7443d05378c680ba756545e8"; + sha256 = "1z9qdk3pk507hdg39v2z1hanlw2wv7mhn8br4cb8qry9z9qwi87i"; }; postPatch = '' sed -i "s,^PREFIX=.*,PREFIX=$out," Makefile ''; + buildInputs = [ fftw ]; + meta = with stdenv.lib; { description = "Simple library to speed up or slow down speech"; homepage = https://github.com/waywardgeek/sonic; diff --git a/pkgs/development/libraries/sundials/default.nix b/pkgs/development/libraries/sundials/default.nix index 4bc066df32e..d19ecf34ab9 100644 --- a/pkgs/development/libraries/sundials/default.nix +++ b/pkgs/development/libraries/sundials/default.nix @@ -2,24 +2,22 @@ , cmake , fetchurl , python -, liblapack +, openblas , gfortran , lapackSupport ? true }: -let liblapackShared = liblapack.override { - shared = true; -}; +let openblas32 = openblas.override { blas64 = false; }; in stdenv.mkDerivation rec { pname = "sundials"; - version = "4.1.0"; + version = "5.0.0"; - buildInputs = [ python ] ++ stdenv.lib.optionals (lapackSupport) [ gfortran ]; + buildInputs = [ python ] ++ stdenv.lib.optionals (lapackSupport) [ gfortran openblas32 ]; nativeBuildInputs = [ cmake ]; src = fetchurl { url = "https://computation.llnl.gov/projects/${pname}/download/${pname}-${version}.tar.gz"; - sha256 = "19ca4nmlf6i9ijqcibyvpprxzsdfnackgjs6dw51fq13gg1f2398"; + sha256 = "1lvx5pddjxgyr8kqlira36kxckz7nxwc8xilzfyx0hf607n42l9l"; }; patches = [ @@ -33,8 +31,6 @@ in stdenv.mkDerivation rec { url = "https://github.com/LLNL/sundials/pull/20/commits/2d951bbe1ff7842fcd0dafa28c61b0aa94015f66.patch"; sha256 = "0lcr6m4lk14yqrxah4rdscpczny5l7m1zpfsjh8bgspadfsgk512"; }) - # https://github.com/LLNL/sundials/pull/21 - ./tests-parallel.patch ]; cmakeFlags = [ @@ -42,7 +38,7 @@ in stdenv.mkDerivation rec { ] ++ stdenv.lib.optionals (lapackSupport) [ "-DSUNDIALS_INDEX_TYPE=int32_t" "-DLAPACK_ENABLE=ON" - "-DLAPACK_LIBRARIES=${liblapackShared}/lib/liblapack${stdenv.hostPlatform.extensions.sharedLibrary};${liblapackShared}/lib/libblas${stdenv.hostPlatform.extensions.sharedLibrary}" + "-DLAPACK_LIBRARIES=${openblas32}/lib/libopenblas${stdenv.hostPlatform.extensions.sharedLibrary}" ]; doCheck = true; diff --git a/pkgs/development/libraries/sundials/tests-parallel.patch b/pkgs/development/libraries/sundials/tests-parallel.patch deleted file mode 100644 index a785a1dade9..00000000000 --- a/pkgs/development/libraries/sundials/tests-parallel.patch +++ /dev/null @@ -1,45 +0,0 @@ -diff --git a/config/SundialsAddTest.cmake b/config/SundialsAddTest.cmake -index e965fed..a7fb1d2 100644 ---- a/config/SundialsAddTest.cmake -+++ b/config/SundialsAddTest.cmake -@@ -70,7 +70,7 @@ MACRO(SUNDIALS_ADD_TEST NAME EXECUTABLE) - "--verbose" - "--testname=${NAME}" - "--executablename=$<TARGET_FILE:${EXECUTABLE}>" -- "--outputdir=${CMAKE_BINARY_DIR}/Testing/output" -+ "--outputdir=${TEST_OUTPUT_DIR}" - ) - - # do not diff the output and answer files -diff --git a/config/SundialsTesting.cmake b/config/SundialsTesting.cmake -index 815576a..d91801a 100644 ---- a/config/SundialsTesting.cmake -+++ b/config/SundialsTesting.cmake -@@ -29,6 +29,13 @@ IF(SUNDIALS_DEVTESTS) - ENDIF() - ENDIF() - -+ # Directory for test output -+ SET(TEST_OUTPUT_DIR ${PROJECT_BINARY_DIR}/Testing/output) -+ -+ IF(NOT EXISTS ${TEST_OUTPUT_DIR}) -+ FILE(MAKE_DIRECTORY ${TEST_OUTPUT_DIR}) -+ ENDIF() -+ - # look for the testRunner script in the test directory - FIND_PROGRAM(TESTRUNNER testRunner PATHS test) - HIDE_VARIABLE(TESTRUNNER) -diff --git a/test/testRunner b/test/testRunner -index f450ec2..f1c8deb 100755 ---- a/test/testRunner -+++ b/test/testRunner -@@ -106,7 +106,8 @@ def main(): - - # create output directory if necessary - if not os.path.exists(outDir): -- os.makedirs(outDir) -+ error("Output directory does not exist, it must be created.", outDir) -+ sys.exit(1) - elif not os.path.isdir(outDir): - error("Output directory exists but is not a directory, it must be deleted.", outDir) - sys.exit(1) diff --git a/pkgs/development/libraries/tcllib/default.nix b/pkgs/development/libraries/tcllib/default.nix index 40e137204e2..b1add708902 100644 --- a/pkgs/development/libraries/tcllib/default.nix +++ b/pkgs/development/libraries/tcllib/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "tcllib"; - version = "1.19"; + version = "1.20"; src = fetchurl { url = "mirror://sourceforge/tcllib/tcllib-${version}.tar.gz"; - sha256 = "173abxaazdmf210v651708ab6h7xhskvd52krxk6ifam337qgzh1"; + sha256 = "0wax281h6ksz974a5qpfgf9y34lmlpd8i87lkm1w94ybbd3rgc73"; }; passthru = { diff --git a/pkgs/development/libraries/tdb/default.nix b/pkgs/development/libraries/tdb/default.nix index 4df80140aa5..9e90e3d3be4 100644 --- a/pkgs/development/libraries/tdb/default.nix +++ b/pkgs/development/libraries/tdb/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "tdb-1.3.16"; + name = "tdb-1.3.18"; src = fetchurl { url = "mirror://samba/tdb/${name}.tar.gz"; - sha256 = "1ibcz466xwk1x6xvzlgzd5va4lyrjzm3rnjak29kkwk7cmhw4gva"; + sha256 = "1drnsdh1w0px35r0y7l7g59yvyr67mvcsdrli4wab0mwi07b8mn1"; }; nativeBuildInputs = [ pkgconfig wafHook ]; diff --git a/pkgs/development/libraries/vaapi-intel/default.nix b/pkgs/development/libraries/vaapi-intel/default.nix index 722079ff347..1775d5fffc5 100644 --- a/pkgs/development/libraries/vaapi-intel/default.nix +++ b/pkgs/development/libraries/vaapi-intel/default.nix @@ -5,16 +5,13 @@ stdenv.mkDerivation rec { pname = "intel-vaapi-driver"; - # TODO: go back to stable releases with the next stable release after 2.3.0. - # see: https://github.com/NixOS/nixpkgs/issues/55975 (and the libva comment v) - rev = "329975c63123610fc750241654a3bd18add75beb"; # generally try to match libva version, but not required - version = "git-20190211"; + version = "2.4.0"; src = fetchFromGitHub { owner = "intel"; repo = "intel-vaapi-driver"; - rev = rev; - sha256 = "10333wh2d0hvz5lxl3gjvqs71s7v9ajb0269b3bj5kbflj03v3n5"; + rev = version; + sha256 = "019w0hvjc9l85yqhy01z2bvvljq208nkb43ai2v377l02krgcrbl"; }; patchPhase = '' diff --git a/pkgs/development/libraries/webkitgtk/2.4.nix b/pkgs/development/libraries/webkitgtk/2.4.nix deleted file mode 100644 index 060109072b4..00000000000 --- a/pkgs/development/libraries/webkitgtk/2.4.nix +++ /dev/null @@ -1,111 +0,0 @@ -{ stdenv, fetchurl, fetchpatch, perl, python, ruby, bison, gperf, flex -, pkgconfig, which, gettext, gobject-introspection -, gtk2, gtk3, wayland, libwebp, enchant, sqlite -, libxml2, libsoup, libsecret, libxslt, harfbuzz, xorg -, gst-plugins-base, libobjc -, withGtk2 ? false -, enableIntrospection ? !stdenv.isDarwin -, enableCredentialStorage ? !stdenv.isDarwin -, readline, libedit -}: - -assert stdenv.isDarwin -> !enableIntrospection; -assert stdenv.isDarwin -> !enableCredentialStorage; - -with stdenv.lib; -stdenv.mkDerivation rec { - pname = "webkitgtk"; - version = "2.4.11"; - - meta = with stdenv.lib; { - description = "Web content rendering engine, GTK port"; - homepage = http://webkitgtk.org/; - license = licenses.bsd2; - platforms = with platforms; linux ++ darwin; - maintainers = []; - knownVulnerabilities = [ - "WSA-2016-0004" - "WSA-2016-0005" - "WSA-2016-0006" - "WSA-2017-0001" - "WSA-2017-0002" - ]; - }; - - src = fetchurl { - url = "https://webkitgtk.org/releases/${pname}-${version}.tar.xz"; - sha256 = "1xsvnvyvlywwyf6m9ainpsg87jkxjmd37q6zgz9cxb7v3c2ym2jq"; - }; - - CC = "cc"; - - prePatch = '' - patchShebangs Tools/gtk - ''; - patches = [ - ./webcore-svg-libxml-cflags.patch - (fetchpatch { - url = https://raw.githubusercontent.com/gentoo/gentoo/7c5457e265bd40c156a8fe6b2ff94a4e34bcea8e/net-libs/webkit-gtk/files/webkit-gtk-2.4.9-gcc-6.patch; - sha256 = "0ll93dr5vxd40wvly1jaw41lvw86krac0jc6k6cacrps4i5ql5j0"; - }) - ] ++ optionals stdenv.isDarwin [ - ./configure.patch - ./quartz-webcore.patch - ./libc++.patch - ./plugin-none.patch - ] ++ optionals stdenv.hostPlatform.isMusl [ - ./fix-execinfo.patch - ]; - - configureFlags = with stdenv.lib; [ - "--disable-geolocation" - "--disable-jit" - # needed for parallel building - "--enable-dependency-tracking" - (optionalString enableIntrospection "--enable-introspection") - ] ++ optional withGtk2 [ - "--with-gtk=2.0" - ] ++ optionals (withGtk2 || stdenv.isDarwin) [ - "--disable-webkit2" - ] ++ optionals stdenv.isDarwin [ - "--disable-x11-target" - "--enable-quartz-target" - "--disable-web-audio" - "CFLAGS=-DJSC_OBJC_API_ENABLED=0" - "CXXFLAGS=-DJSC_OBJC_API_ENABLED=0" - ] ++ optionals (!enableCredentialStorage) [ - "--disable-credential-storage" - ]; - - NIX_CFLAGS_COMPILE = [ - "-DU_NOEXCEPT=" - "-Wno-expansion-to-defined" - ]; - - dontAddDisableDepTrack = true; - - nativeBuildInputs = [ - perl python ruby bison gperf flex - pkgconfig which gettext gobject-introspection - ]; - - buildInputs = [ - gtk2 libwebp enchant - libxml2 libxslt - gst-plugins-base sqlite xorg.libXt xorg.libXdamage - ] ++ optionals enableCredentialStorage [ - libsecret - ] ++ (if stdenv.isDarwin then [ - readline libedit libobjc - ] else [ - wayland - ]); - - propagatedBuildInputs = [ - libsoup harfbuzz/*icu in *.la*/ - (if withGtk2 then gtk2 else gtk3) - ]; - - enableParallelBuilding = true; - -} diff --git a/pkgs/development/libraries/webkitgtk/configure.patch b/pkgs/development/libraries/webkitgtk/configure.patch deleted file mode 100644 index 2f4c1e7ad31..00000000000 --- a/pkgs/development/libraries/webkitgtk/configure.patch +++ /dev/null @@ -1,20 +0,0 @@ ---- webkitgtk-2.4.11-orig/configure 2016-04-10 17:00:06.000000000 +0800 -+++ webkitgtk-2.4.11/configure 2016-07-21 23:04:10.000000000 +0800 -@@ -17738,7 +17738,7 @@ - cat >>confdefs.h <<_ACEOF - #define HAVE_WEBP_DECODE_H 1 - _ACEOF -- WEBP_LIBS='-lwebp' -+ WEBP_LIBS=`$PKG_CONFIG --libs libwebp` - else - as_fn_error $? "WebP library (libwebp) not found" "$LINENO" 5 - fi -@@ -18388,7 +18388,7 @@ - case "$host" in - *-*-darwin*) - UNICODE_CFLAGS="-I$srcdir/Source/JavaScriptCore/icu -I$srcdir/Source/WebCore/icu" -- UNICODE_LIBS="-licucore" -+ UNICODE_LIBS="/usr/lib/libicucore.dylib" - ;; - *-*-mingw*) - diff --git a/pkgs/development/libraries/webkitgtk/default.nix b/pkgs/development/libraries/webkitgtk/default.nix index e8fe798476c..d1e171566ee 100644 --- a/pkgs/development/libraries/webkitgtk/default.nix +++ b/pkgs/development/libraries/webkitgtk/default.nix @@ -1,12 +1,56 @@ -{ stdenv, fetchurl, perl, python2, ruby, bison, gperf, cmake, ninja -, pkgconfig, gettext, gobject-introspection, libnotify, gnutls, libgcrypt -, gtk3, wayland, libwebp, enchant2, xorg, libxkbcommon, epoxy, at-spi2-core -, libxml2, libsoup, libsecret, libxslt, harfbuzz, libpthreadstubs, pcre, nettle, libtasn1, p11-kit -, libidn, libedit, readline, libGL, libGLU, libintl, openjpeg -, enableGeoLocation ? true, geoclue2, sqlite -, enableGtk2Plugins ? false, gtk2 ? null -, gst-plugins-base, gst-plugins-bad, woff2 -, bubblewrap, libseccomp, xdg-dbus-proxy, substituteAll +{ stdenv +, fetchurl +, perl +, python3 +, ruby +, bison +, gperf +, cmake +, ninja +, pkgconfig +, gettext +, gobject-introspection +, libnotify +, gnutls +, libgcrypt +, gtk3 +, wayland +, libwebp +, enchant2 +, xorg +, libxkbcommon +, epoxy +, at-spi2-core +, libxml2 +, libsoup +, libsecret +, libxslt +, harfbuzz +, libpthreadstubs +, pcre +, nettle +, libtasn1 +, p11-kit +, libidn +, libedit +, readline +, libGL +, libGLU +, libintl +, openjpeg +, enableGeoLocation ? true +, geoclue2 +, sqlite +, enableGtk2Plugins ? false +, gtk2 ? null +, gst-plugins-base +, gst-plugins-bad +, woff2 +, bubblewrap +, libseccomp +, xdg-dbus-proxy +, substituteAll +, gnome3 }: assert enableGeoLocation -> geoclue2 != null; @@ -14,18 +58,12 @@ assert enableGtk2Plugins -> gtk2 != null; assert stdenv.isDarwin -> !enableGtk2Plugins; with stdenv.lib; + stdenv.mkDerivation rec { pname = "webkitgtk"; version = "2.26.2"; - meta = { - description = "Web content rendering engine, GTK port"; - homepage = https://webkitgtk.org/; - license = licenses.bsd2; - platforms = platforms.linux; - hydraPlatforms = []; - maintainers = with maintainers; [ ]; - }; + outputs = [ "out" "dev" ]; src = fetchurl { url = "https://webkitgtk.org/releases/${pname}-${version}.tar.xz"; @@ -40,54 +78,97 @@ stdenv.mkDerivation rec { ./libglvnd-headers.patch ]; - postPatch = '' - patchShebangs . - ''; - - cmakeFlags = [ - "-DPORT=GTK" - "-DUSE_LIBHYPHEN=OFF" - "-DENABLE_INTROSPECTION=ON" - "-DUSE_WPE_RENDERER=OFF" - ] - ++ optional (!enableGtk2Plugins) "-DENABLE_PLUGIN_PROCESS_GTK2=OFF" - ++ optional stdenv.isLinux "-DENABLE_GLES2=ON" - ++ optionals stdenv.isDarwin [ - "-DUSE_SYSTEM_MALLOC=ON" - "-DUSE_ACCELERATE=0" - "-DENABLE_MINIBROWSER=OFF" - "-DENABLE_VIDEO=ON" - "-DENABLE_QUARTZ_TARGET=ON" - "-DENABLE_X11_TARGET=OFF" - "-DENABLE_OPENGL=OFF" - "-DENABLE_WEB_AUDIO=OFF" - "-DENABLE_WEBGL=OFF" - "-DENABLE_GRAPHICS_CONTEXT_3D=OFF" - "-DENABLE_GTKDOC=OFF" - ]; - nativeBuildInputs = [ - cmake ninja perl python2 ruby bison gperf - pkgconfig gettext gobject-introspection + bison + cmake + gettext + gobject-introspection + gperf + ninja + perl + pkgconfig + python3 + ruby ]; buildInputs = [ - libintl libwebp enchant2 libnotify gnutls pcre nettle libidn libgcrypt woff2 - libxml2 libsecret libxslt harfbuzz libpthreadstubs libtasn1 p11-kit openjpeg - sqlite gst-plugins-base gst-plugins-bad libxkbcommon epoxy at-spi2-core - libGL libGLU + at-spi2-core + enchant2 + epoxy + gnutls + gst-plugins-bad + gst-plugins-base + harfbuzz + libGL + libGLU + libgcrypt + libidn + libintl + libnotify + libpthreadstubs + libsecret + libtasn1 + libwebp + libxkbcommon + libxml2 + libxslt + nettle + openjpeg + p11-kit + pcre + sqlite + woff2 + ] ++ (with xorg; [ + libXdamage + libXdmcp + libXt + libXtst + ]) ++ optionals stdenv.isDarwin [ + libedit + readline + ] ++ optionals stdenv.isLinux [ + bubblewrap + libseccomp + wayland + xdg-dbus-proxy ] ++ optional enableGeoLocation geoclue2 - ++ optional enableGtk2Plugins gtk2 - ++ (with xorg; [ libXdmcp libXt libXtst libXdamage ]) - ++ optionals stdenv.isDarwin [ libedit readline ] - ++ optionals stdenv.isLinux [ - wayland bubblewrap libseccomp xdg-dbus-proxy - ]; + ++ optional enableGtk2Plugins gtk2; propagatedBuildInputs = [ - libsoup gtk3 + gtk3 + libsoup ]; - outputs = [ "out" "dev" ]; + cmakeFlags = [ + "-DENABLE_INTROSPECTION=ON" + "-DPORT=GTK" + "-DUSE_LIBHYPHEN=OFF" + "-DUSE_WPE_RENDERER=OFF" + ] ++ optionals stdenv.isDarwin [ + "-DENABLE_GRAPHICS_CONTEXT_3D=OFF" + "-DENABLE_GTKDOC=OFF" + "-DENABLE_MINIBROWSER=OFF" + "-DENABLE_OPENGL=OFF" + "-DENABLE_QUARTZ_TARGET=ON" + "-DENABLE_VIDEO=ON" + "-DENABLE_WEBGL=OFF" + "-DENABLE_WEB_AUDIO=OFF" + "-DENABLE_X11_TARGET=OFF" + "-DUSE_ACCELERATE=0" + "-DUSE_SYSTEM_MALLOC=ON" + ] ++ optional (!enableGtk2Plugins) "-DENABLE_PLUGIN_PROCESS_GTK2=OFF" + ++ optional stdenv.isLinux "-DENABLE_GLES2=ON"; + + postPatch = '' + patchShebangs . + ''; + meta = { + description = "Web content rendering engine, GTK port"; + homepage = https://webkitgtk.org/; + license = licenses.bsd2; + platforms = platforms.linux; + hydraPlatforms = []; + maintainers = gnome3.maintainers; + }; } diff --git a/pkgs/development/libraries/webkitgtk/fix-execinfo.patch b/pkgs/development/libraries/webkitgtk/fix-execinfo.patch deleted file mode 100644 index eb825312f3b..00000000000 --- a/pkgs/development/libraries/webkitgtk/fix-execinfo.patch +++ /dev/null @@ -1,20 +0,0 @@ ---- webkitgtk-2.2.0.orig/Source/WTF/wtf/Assertions.cpp -+++ webkitgtk-2.2.0/Source/WTF/wtf/Assertions.cpp -@@ -64,7 +64,7 @@ - #include <windows.h> - #endif - --#if OS(DARWIN) || (OS(LINUX) && !defined(__UCLIBC__)) -+#if OS(DARWIN) || (OS(LINUX) && defined(__GLIBC__) && !defined(__UCLIBC__)) - #include <cxxabi.h> - #include <dlfcn.h> - #include <execinfo.h> -@@ -242,7 +242,7 @@ - - void WTFGetBacktrace(void** stack, int* size) - { --#if OS(DARWIN) || (OS(LINUX) && !defined(__UCLIBC__)) -+#if OS(DARWIN) || (OS(LINUX) && defined(__GLIBC__) && !defined(__UCLIBC__)) - *size = backtrace(stack, *size); - #elif OS(WINDOWS) && !OS(WINCE) - // The CaptureStackBackTrace function is available in XP, but it is not defined diff --git a/pkgs/development/libraries/webkitgtk/libc++.patch b/pkgs/development/libraries/webkitgtk/libc++.patch deleted file mode 100644 index 5a9df0ddae9..00000000000 --- a/pkgs/development/libraries/webkitgtk/libc++.patch +++ /dev/null @@ -1,20 +0,0 @@ ---- webkitgtk-2.4.9-orig/GNUmakefile.in 2016-02-02 13:23:23.000000000 -0500 -+++ webkitgtk-2.4.9/GNUmakefile.in 2016-02-02 22:10:23.000000000 -0500 -@@ -23321,7 +23321,7 @@ - $(WINMM_LIBS) \ - -lm \ - -lpthread \ -- -lstdc++ -+ -lc++ - - Programs_minidom_LDFLAGS = \ - -no-install -@@ -23344,7 +23344,7 @@ - $(WINMM_LIBS) \ - -lm \ - -lpthread \ -- -lstdc++ -+ -lc++ - - Programs_LLIntOffsetsExtractor_LDFLAGS = \ - -no-install diff --git a/pkgs/development/libraries/webkitgtk/plugin-none.patch b/pkgs/development/libraries/webkitgtk/plugin-none.patch deleted file mode 100644 index 5e2b36bf62d..00000000000 --- a/pkgs/development/libraries/webkitgtk/plugin-none.patch +++ /dev/null @@ -1,38 +0,0 @@ ---- webkitgtk-2.4.9-orig/GNUmakefile.in 2016-02-02 13:23:23.000000000 -0500 -+++ webkitgtk-2.4.9/GNUmakefile.in 2016-02-08 00:27:10.000000000 -0500 -@@ -4799,6 +4799,8 @@ - Source/WebCore/plugins/PluginViewBase.h \ - Source/WebCore/plugins/PluginView.cpp \ - Source/WebCore/plugins/PluginView.h \ -+ Source/WebCore/plugins/PluginViewNone.cpp \ -+ Source/WebCore/plugins/PluginPackageNone.cpp \ - Source/WebCore/plugins/npapi.h \ - Source/WebCore/plugins/npfunctions.h \ - Source/WebCore/plugins/npruntime.h \ -@@ -6375,6 +6377,8 @@ - Source/WebCore/plugins/libWebCore_la-PluginPackage.lo \ - Source/WebCore/plugins/libWebCore_la-PluginStream.lo \ - Source/WebCore/plugins/libWebCore_la-PluginView.lo \ -+ Source/WebCore/plugins/libWebCore_la-PluginViewNone.lo \ -+ Source/WebCore/plugins/libWebCore_la-PluginPackageNone.lo \ - Source/WebCore/rendering/libWebCore_la-AutoTableLayout.lo \ - Source/WebCore/rendering/libWebCore_la-BidiRun.lo \ - Source/WebCore/rendering/libWebCore_la-break_lines.lo \ -@@ -10796,6 +10800,8 @@ - Source/WebKit2/WebProcess/Plugins/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-PluginProcessConnectionManager.lo \ - Source/WebKit2/WebProcess/Plugins/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-PluginProxy.lo \ - Source/WebKit2/WebProcess/Plugins/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-PluginView.lo \ -+ Source/WebKit2/WebProcess/Plugins/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-PluginViewNone.lo \ -+ Source/WebKit2/WebProcess/Plugins/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-PluginPackageNone.lo \ - Source/WebKit2/WebProcess/ResourceCache/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-WebResourceCacheManager.lo \ - Source/WebKit2/WebProcess/Storage/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-StorageAreaImpl.lo \ - Source/WebKit2/WebProcess/Storage/libwebkit2gtk_@WEBKITGTK_API_MAJOR_VERSION@_@WEBKITGTK_API_MINOR_VERSION@_la-StorageAreaMap.lo \ -@@ -19503,6 +19509,8 @@ - Source/WebCore/plugins/PluginViewBase.h \ - Source/WebCore/plugins/PluginView.cpp \ - Source/WebCore/plugins/PluginView.h \ -+ Source/WebCore/plugins/PluginViewNone.cpp \ -+ Source/WebCore/plugins/PluginPackageNone.cpp \ - Source/WebCore/plugins/npapi.h \ - Source/WebCore/plugins/npfunctions.h \ - Source/WebCore/plugins/npruntime.h \ diff --git a/pkgs/development/libraries/webkitgtk/quartz-webcore.patch b/pkgs/development/libraries/webkitgtk/quartz-webcore.patch deleted file mode 100644 index a7bf859d6c6..00000000000 --- a/pkgs/development/libraries/webkitgtk/quartz-webcore.patch +++ /dev/null @@ -1,22 +0,0 @@ ---- webkitgtk-2.4.9-orig/Source/WebCore/plugins/PluginView.cpp 2016-02-02 13:23:23.000000000 -0500 -+++ webkitgtk-2.4.9/Source/WebCore/plugins/PluginView.cpp 2016-02-02 18:28:07.000000000 -0500 -@@ -839,7 +839,7 @@ - #if defined(XP_MACOSX) - , m_contextRef(0) - #endif --#if defined(XP_UNIX) && ENABLE(NETSCAPE_PLUGIN_API) -+#if defined(X11) && ENABLE(NETSCAPE_PLUGIN_API) - , m_hasPendingGeometryChange(true) - , m_drawable(0) - , m_visual(0) ---- webkitgtk-2.4.9-orig/Source/WebCore/plugins/PluginView.h 2016-02-02 13:23:23.000000000 -0500 -+++ webkitgtk-2.4.9/Source/WebCore/plugins/PluginView.h 2016-02-02 18:26:37.000000000 -0500 -@@ -378,7 +378,7 @@ - void setNPWindowIfNeeded(); - #endif - --#if defined(XP_UNIX) && ENABLE(NETSCAPE_PLUGIN_API) -+#if PLATFORM(X11) && ENABLE(NETSCAPE_PLUGIN_API) - bool m_hasPendingGeometryChange; - Pixmap m_drawable; - Visual* m_visual; diff --git a/pkgs/development/libraries/webkitgtk/webcore-svg-libxml-cflags.patch b/pkgs/development/libraries/webkitgtk/webcore-svg-libxml-cflags.patch deleted file mode 100644 index 03fc3f3f97d..00000000000 --- a/pkgs/development/libraries/webkitgtk/webcore-svg-libxml-cflags.patch +++ /dev/null @@ -1,8 +0,0 @@ ---- webkitgtk-2.2.3-orig/GNUmakefile.in 2013-12-04 17:56:28.000000000 +0800 -+++ webkitgtk-2.2.3/GNUmakefile.in 2013-12-05 17:32:37.976689248 +0800 -@@ -21911,6 +21911,7 @@ - @ENABLE_SVG_TRUE@ $(CAIRO_CFLAGS) \ - @ENABLE_SVG_TRUE@ $(FREETYPE_CFLAGS) \ - @ENABLE_SVG_TRUE@ $(LIBSOUP_CFLAGS) \ -+@ENABLE_SVG_TRUE@ $(LIBXML_CFLAGS) \ - @ENABLE_SVG_TRUE@ $(UNICODE_CFLAGS) diff --git a/pkgs/development/libraries/wt/default.nix b/pkgs/development/libraries/wt/default.nix index 74792f8f34c..7c819487a33 100644 --- a/pkgs/development/libraries/wt/default.nix +++ b/pkgs/development/libraries/wt/default.nix @@ -49,12 +49,12 @@ let }; in { wt3 = generic { - version = "3.4.2"; - sha256 = "03mwr4yv3705y74pdh19lmh8szad6gk2x2m23f4pr0wrmqg73307"; + version = "3.5.0"; + sha256 = "1xcwzldbval5zrf7f3n2gkpscagg51cw2jp6p3q1yh6bi59haida"; }; wt4 = generic { - version = "4.1.2"; - sha256 = "06bnadpgflg8inikzynnz4l4r6w1bphjwlva4pzf51w648vpkknl"; + version = "4.2.0"; + sha256 = "0zrrdjz0sa8hrmybjp4aap1lcqcqvsicd7dj49zj1m5k8gnfpm4v"; }; } diff --git a/pkgs/development/libraries/wxwidgets/3.0/default.nix b/pkgs/development/libraries/wxwidgets/3.0/default.nix index a12447562b8..3bbfb139279 100644 --- a/pkgs/development/libraries/wxwidgets/3.0/default.nix +++ b/pkgs/development/libraries/wxwidgets/3.0/default.nix @@ -6,15 +6,16 @@ , libGLU ? null, libGL ? null , compat24 ? false, compat26 ? true, unicode ? true , withGtk2 ? true -, withWebKit ? false, webkitgtk24x-gtk2 ? null, webkitgtk ? null +, withWebKit ? false, webkitgtk ? null , AGL ? null, Carbon ? null, Cocoa ? null, Kernel ? null, QTKit ? null }: +with stdenv.lib; assert withMesa -> libGLU != null && libGL != null; -assert withWebKit -> (if withGtk2 then webkitgtk24x-gtk2 else webkitgtk) != null; +assert withWebKit -> webkitgtk != null; -with stdenv.lib; +assert assertMsg (withGtk2 -> withWebKit == false) "wxGTK30: You cannot enable withWebKit when using withGtk2."; stdenv.mkDerivation rec { version = "3.0.4"; @@ -31,7 +32,7 @@ stdenv.mkDerivation rec { [ (if withGtk2 then gtk2 else gtk3) libXinerama libSM libXxf86vm xorgproto gstreamer gst-plugins-base GConf ] ++ optional withMesa libGLU - ++ optional withWebKit (if withGtk2 then webkitgtk24x-gtk2 else webkitgtk) + ++ optional withWebKit webkitgtk ++ optionals stdenv.isDarwin [ setfile Carbon Cocoa Kernel QTKit ]; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/wxwidgets/3.1/default.nix b/pkgs/development/libraries/wxwidgets/3.1/default.nix index 8fe75153de6..0984472e860 100644 --- a/pkgs/development/libraries/wxwidgets/3.1/default.nix +++ b/pkgs/development/libraries/wxwidgets/3.1/default.nix @@ -5,15 +5,16 @@ , withMesa ? libGLSupported, libGLU ? null, libGL ? null , compat28 ? false, compat30 ? true, unicode ? true , withGtk2 ? true -, withWebKit ? false, webkitgtk24x-gtk2 ? null, webkitgtk ? null +, withWebKit ? false, webkitgtk ? null , AGL ? null, Carbon ? null, Cocoa ? null, Kernel ? null, QTKit ? null }: +with stdenv.lib; assert withMesa -> libGLU != null && libGL != null; -assert withWebKit -> (if withGtk2 then webkitgtk24x-gtk2 else webkitgtk) != null; +assert withWebKit -> webkitgtk != null; -with stdenv.lib; +assert assertMsg (withGtk2 -> withWebKit == false) "wxGTK31: You cannot enable withWebKit when using withGtk2."; stdenv.mkDerivation rec { version = "3.1.2"; @@ -30,7 +31,7 @@ stdenv.mkDerivation rec { [ (if withGtk2 then gtk2 else gtk3) libXinerama libSM libXxf86vm xorgproto gstreamer gst-plugins-base GConf ] ++ optional withMesa libGLU - ++ optional withWebKit (if withGtk2 then webkitgtk24x-gtk2 else webkitgtk) + ++ optional withWebKit webkitgtk ++ optionals stdenv.isDarwin [ setfile Carbon Cocoa Kernel QTKit ]; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/zlib/default.nix b/pkgs/development/libraries/zlib/default.nix index b0f8ae503ea..71da686ce48 100644 --- a/pkgs/development/libraries/zlib/default.nix +++ b/pkgs/development/libraries/zlib/default.nix @@ -5,7 +5,7 @@ , shared ? true , static ? true # If true, a separate .static ouput is created and the .a is moved there. -# In this case `pkg-config` will auto detection will currently not work if the +# In this case `pkg-config` auto detection does not currently work if the # .static output is given as `buildInputs` to another package (#66461), because # the `.pc` file lists only the main output's lib dir. # If false, and if `{ static = true; }`, the .a stays in the main output. diff --git a/pkgs/development/mobile/cocoapods/Gemfile-beta.lock b/pkgs/development/mobile/cocoapods/Gemfile-beta.lock index 5b7288ad4f7..c077132a9f3 100644 --- a/pkgs/development/mobile/cocoapods/Gemfile-beta.lock +++ b/pkgs/development/mobile/cocoapods/Gemfile-beta.lock @@ -1,7 +1,7 @@ GEM remote: https://rubygems.org/ specs: - CFPropertyList (3.0.1) + CFPropertyList (3.0.2) activesupport (4.2.11.1) i18n (~> 0.7) minitest (~> 5.1) @@ -12,10 +12,10 @@ GEM json (>= 1.5.1) atomos (0.1.3) claide (1.0.3) - cocoapods (1.8.4) + cocoapods (1.9.0.beta.1) activesupport (>= 4.0.2, < 5) claide (>= 1.0.2, < 2.0) - cocoapods-core (= 1.8.4) + cocoapods-core (= 1.9.0.beta.1) cocoapods-deintegrate (>= 1.0.3, < 2.0) cocoapods-downloader (>= 1.2.2, < 2.0) cocoapods-plugins (>= 1.0.0, < 2.0) @@ -30,15 +30,17 @@ GEM molinillo (~> 0.6.6) nap (~> 1.0) ruby-macho (~> 1.4) - xcodeproj (>= 1.11.1, < 2.0) - cocoapods-core (1.8.4) + xcodeproj (>= 1.14.0, < 2.0) + cocoapods-core (1.9.0.beta.1) activesupport (>= 4.0.2, < 6) algoliasearch (~> 1.0) concurrent-ruby (~> 1.1) fuzzy_match (~> 2.0.4) nap (~> 1.0) + netrc (~> 0.11) + typhoeus (~> 1.0) cocoapods-deintegrate (1.0.4) - cocoapods-downloader (1.2.2) + cocoapods-downloader (1.3.0) cocoapods-plugins (1.0.0) nap cocoapods-search (1.0.0) @@ -50,23 +52,28 @@ GEM colored2 (3.1.2) concurrent-ruby (1.1.5) escape (0.0.4) + ethon (0.12.0) + ffi (>= 1.3.0) + ffi (1.11.3) fourflusher (2.3.1) fuzzy_match (2.0.4) gh_inspector (1.1.3) httpclient (2.8.3) i18n (0.9.5) concurrent-ruby (~> 1.0) - json (2.2.0) - minitest (5.12.2) + json (2.3.0) + minitest (5.13.0) molinillo (0.6.6) nanaimo (0.2.6) nap (1.1.0) netrc (0.11.0) ruby-macho (1.4.0) thread_safe (0.3.6) + typhoeus (1.3.1) + ethon (>= 0.9.0) tzinfo (1.2.5) thread_safe (~> 0.1) - xcodeproj (1.13.0) + xcodeproj (1.14.0) CFPropertyList (>= 2.3.3, < 4.0) atomos (~> 0.1.3) claide (>= 1.0.2, < 2.0) @@ -80,4 +87,4 @@ DEPENDENCIES cocoapods (>= 1.7.0.beta.1)! BUNDLED WITH - 1.17.2 + 1.17.3 diff --git a/pkgs/development/mobile/cocoapods/gemset-beta.nix b/pkgs/development/mobile/cocoapods/gemset-beta.nix index b94bc461944..120680f658d 100644 --- a/pkgs/development/mobile/cocoapods/gemset-beta.nix +++ b/pkgs/development/mobile/cocoapods/gemset-beta.nix @@ -36,10 +36,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0fr8sdzs2q1969zqh790w223hjidlwx4hfm4c91gj0va5j5pv3n8"; + sha256 = "1825ll26p28swjiw8n3x2pnh5ygsmg83spf82fnzcjn2p87vc5lf"; type = "gem"; }; - version = "3.0.1"; + version = "3.0.2"; }; claide = { groups = ["default"]; @@ -57,21 +57,21 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "007ssx75588ji2d8l8s6c95dng1c7b6yacng8nngpy7maijzjgzc"; + sha256 = "14447zrbg90gvjhfpwmjsfh4n7i9f0p1zd0jj3m2cx4y8102djiy"; type = "gem"; }; - version = "1.8.4"; + version = "1.9.0.beta.1"; }; cocoapods-core = { - dependencies = ["activesupport" "algoliasearch" "concurrent-ruby" "fuzzy_match" "nap"]; + dependencies = ["activesupport" "algoliasearch" "concurrent-ruby" "fuzzy_match" "nap" "netrc" "typhoeus"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zcisqb404828n5d3lbk9y2yyx8v2yr6rk1l8y9a4i1hp743fiad"; + sha256 = "0nhrqwrvblpgf4k3cy0nyxfphyzw46zql1pdv1x7y42h4cn5z8qp"; type = "gem"; }; - version = "1.8.4"; + version = "1.9.0.beta.1"; }; cocoapods-deintegrate = { groups = ["default"]; @@ -88,10 +88,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "09fd4zaqkz8vz3djplacngcs4n0j6j956wgq43s1y6bwl0zyjmd3"; + sha256 = "08vn0pgcyn6w6fq5xjd7szv2h9s5rzl17kyidnd7fl5qdmzc9c54"; type = "gem"; }; - version = "1.2.2"; + version = "1.3.0"; }; cocoapods-plugins = { dependencies = ["nap"]; @@ -175,6 +175,27 @@ }; version = "0.0.4"; }; + ethon = { + dependencies = ["ffi"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0gggrgkcq839mamx7a8jbnp2h7x2ykfn34ixwskwb0lzx2ak17g9"; + type = "gem"; + }; + version = "0.12.0"; + }; + ffi = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "10ay35dm0lkcqprsiya6q2kwvyid884102ryipr4vrk790yfp8kd"; + type = "gem"; + }; + version = "1.11.3"; + }; fourflusher = { groups = ["default"]; platforms = []; @@ -231,20 +252,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0sx97bm9by389rbzv8r1f43h06xcz8vwi3h5jv074gvparql7lcx"; + sha256 = "0nrmw2r4nfxlfgprfgki3hjifgrcrs3l5zvm3ca3gb4743yr25mn"; type = "gem"; }; - version = "2.2.0"; + version = "2.3.0"; }; minitest = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zjm24aiz42i9n37mcw8lydd7n0y7wfk27by06jx77ypcld3qvkw"; + sha256 = "0w16p7cvslh3hxd3cia8jg4pd85z7rz7xqb16vh42gj4rijn8rmi"; type = "gem"; }; - version = "5.12.2"; + version = "5.13.0"; }; molinillo = { groups = ["default"]; @@ -306,6 +327,17 @@ }; version = "0.3.6"; }; + typhoeus = { + dependencies = ["ethon"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0cni8b1idcp0dk8kybmxydadhfpaj3lbs99w5kjibv8bsmip2zi5"; + type = "gem"; + }; + version = "1.3.1"; + }; tzinfo = { dependencies = ["thread_safe"]; groups = ["default"]; @@ -323,9 +355,9 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1c69yrhqd92q6nnpyhvnqyw9l7axnc91gnbd2gai8f5njdisd8wx"; + sha256 = "1h9iba53mrb663qdqzpfbdwkwzqv7hndd0df71yr2kj2hzwjmkvb"; type = "gem"; }; - version = "1.13.0"; + version = "1.14.0"; }; } \ No newline at end of file diff --git a/pkgs/development/ocaml-modules/biocaml/default.nix b/pkgs/development/ocaml-modules/biocaml/default.nix new file mode 100644 index 00000000000..4f97594fb7c --- /dev/null +++ b/pkgs/development/ocaml-modules/biocaml/default.nix @@ -0,0 +1,30 @@ +{ stdenv, buildDunePackage, fetchFromGitHub +, ounit, async, base64, camlzip, cfstream +, core, ppx_jane, ppx_sexp_conv, rresult, uri, xmlm }: + +buildDunePackage rec { + pname = "biocaml"; + version = "0.10.0"; + + owner = "biocaml"; + + minimumOCamlVersion = "4.07"; + + src = fetchFromGitHub { + inherit owner; + repo = pname; + rev = "v${version}"; + sha256 = "0dghqx6jbzihmga8jjwwavs0wqksgcns4z1nmwj0ds9ik3mcra30"; + }; + + buildInputs = [ ppx_jane ppx_sexp_conv ]; + checkInputs = [ ounit ]; + propagatedBuildInputs = [ async base64 camlzip cfstream core rresult uri xmlm ]; + + meta = with stdenv.lib; { + description = "Bioinformatics library for Ocaml"; + homepage = "http://${owner}.github.io/${pname}"; + maintainers = [ maintainers.bcdarwin ]; + license = licenses.gpl2; + }; +} diff --git a/pkgs/development/ocaml-modules/cfstream/default.nix b/pkgs/development/ocaml-modules/cfstream/default.nix new file mode 100644 index 00000000000..db6d2b1d440 --- /dev/null +++ b/pkgs/development/ocaml-modules/cfstream/default.nix @@ -0,0 +1,30 @@ +{ stdenv, buildDunePackage, fetchFromGitHub, m4, core_kernel, ounit }: + +buildDunePackage rec { + pname = "cfstream"; + version = "1.3.0"; + + minimumOCamlVersion = "4.04.1"; + + src = fetchFromGitHub { + owner = "biocaml"; + repo = pname; + rev = version; + sha256 = "1bpzpci0cx6r3sdk183mm603wgzvvj46nlx0lpx44108anxcxbak"; + }; + + patches = [ ./git_commit.patch ]; + + buildInputs = [ m4 ]; + checkInputs = [ ounit ]; + propagatedBuildInputs = [ core_kernel ]; + + doCheck = true; + + meta = with stdenv.lib; { + inherit (src.meta) homepage; + description = "Simple Core-inspired wrapper for standard library Stream module"; + maintainers = [ maintainers.bcdarwin ]; + license = licenses.lgpl21; + }; +} diff --git a/pkgs/development/ocaml-modules/cfstream/git_commit.patch b/pkgs/development/ocaml-modules/cfstream/git_commit.patch new file mode 100644 index 00000000000..5f8d8f5ce31 --- /dev/null +++ b/pkgs/development/ocaml-modules/cfstream/git_commit.patch @@ -0,0 +1,13 @@ +diff --git a/lib/jbuild b/lib/jbuild +index fcc5a39..d72d50c 100644 +--- a/lib/jbuild ++++ b/lib/jbuild +@@ -10,7 +10,7 @@ + (rule ( + (targets (GIT_COMMIT)) + (deps (../bin/git_commit.sh)) +- (action (with-stdout-to ${@} (run ${<}))) ++ (action (with-stdout-to ${@} (run echo "None"))) + )) + + (rule ( diff --git a/pkgs/development/ocaml-modules/containers/default.nix b/pkgs/development/ocaml-modules/containers/default.nix index 1b465c2984e..b12b6e8c265 100644 --- a/pkgs/development/ocaml-modules/containers/default.nix +++ b/pkgs/development/ocaml-modules/containers/default.nix @@ -4,23 +4,23 @@ }: buildDunePackage rec { - version = "2.6.1"; + version = "2.7"; pname = "containers"; src = fetchFromGitHub { owner = "c-cube"; repo = "ocaml-containers"; - rev = version; - sha256 = "02iq01pq6047hab5s8zpprwr21cygvzfcfj2lpsyj823f28crhmv"; + rev = "v${version}"; + sha256 = "1nsxfgn1g1vpqihb9gd6gsab0bcm70nf9z84cp441c8wsc57hi6a"; }; buildInputs = [ iter ]; - checkInputs = lib.optionals doCheck [ gen mdx ounit qcheck uutf ]; + checkInputs = lib.optionals doCheck [ gen mdx.bin ounit qcheck uutf ]; propagatedBuildInputs = [ result uchar ]; - doCheck = !lib.versionAtLeast ocaml.version "4.08"; + doCheck = true; meta = { homepage = https://github.com/c-cube/ocaml-containers; diff --git a/pkgs/development/ocaml-modules/cryptokit/default.nix b/pkgs/development/ocaml-modules/cryptokit/default.nix index 8d69e09b3ee..50857e159dd 100644 --- a/pkgs/development/ocaml-modules/cryptokit/default.nix +++ b/pkgs/development/ocaml-modules/cryptokit/default.nix @@ -5,9 +5,9 @@ assert stdenv.lib.versionAtLeast ocaml.version "3.12"; let param = if stdenv.lib.versionAtLeast ocaml.version "4.02" then { - version = "1.13"; - url = https://github.com/xavierleroy/cryptokit/archive/release113.tar.gz; - sha256 = "1f4jjnp2a911nqw0hbijyv9vygkk6kw5zx75qs49hfm3by6ij8rq"; + version = "1.14"; + url = https://github.com/xavierleroy/cryptokit/archive/release114.tar.gz; + sha256 = "0wkh72idkb7dahiwyl94hhbq27cc7x9fnmxkpnbqli6wi8wd7d05"; inherit zarith; } else { version = "1.10"; @@ -25,8 +25,8 @@ stdenv.mkDerivation { inherit (param) url sha256; }; - buildInputs = [ zlib ocaml findlib ocamlbuild ncurses ]; - propagatedBuildInputs = [ param.zarith ]; + buildInputs = [ ocaml findlib ocamlbuild ncurses ]; + propagatedBuildInputs = [ param.zarith zlib ]; buildFlags = "setup.data build"; diff --git a/pkgs/development/ocaml-modules/dispatch/default.nix b/pkgs/development/ocaml-modules/dispatch/default.nix new file mode 100644 index 00000000000..5de61169c36 --- /dev/null +++ b/pkgs/development/ocaml-modules/dispatch/default.nix @@ -0,0 +1,27 @@ +{ lib, buildDunePackage, fetchFromGitHub, alcotest, result }: + +buildDunePackage rec { + pname = "dispatch"; + version = "0.4.1"; + + src = fetchFromGitHub { + owner = "inhabitedtype"; + repo = "ocaml-dispatch"; + rev = "${version}"; + sha256 = "05kb9zcihk50r2haqz8vrlr7kmaka6vrs4j1z500lmnl877as6qr"; + }; + + propagatedBuildInputs = [ result ]; + + checkInputs = lib.optional doCheck alcotest; + + doCheck = true; + + meta = { + inherit (src.meta) homepage; + license = lib.licenses.bsd3; + description = "Path-based dispatching for client- and server-side applications"; + maintainers = [ lib.maintainers.vbgl ]; + }; + +} diff --git a/pkgs/development/ocaml-modules/git/default.nix b/pkgs/development/ocaml-modules/git/default.nix index 929382abe76..741e004979c 100644 --- a/pkgs/development/ocaml-modules/git/default.nix +++ b/pkgs/development/ocaml-modules/git/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchFromGitHub, buildDunePackage +{ lib, fetchurl, buildDunePackage , alcotest, git, mtime, nocrypto , angstrom, astring, cstruct, decompress, digestif, encore, duff, fmt , fpath, hex, ke, logs, lru, ocaml_lwt, ocamlgraph, ocplib-endian, uri, rresult @@ -6,13 +6,11 @@ buildDunePackage rec { pname = "git"; - version = "2.1.0"; + version = "2.1.2"; - src = fetchFromGitHub { - owner = "mirage"; - repo = "ocaml-git"; - rev = version; - sha256 = "0v55zkwgml6i5hp0kzynbi58z6j15k3qgzg06b3h8pdbv5fwd1jp"; + src = fetchurl { + url = "https://github.com/mirage/ocaml-git/releases/download/${version}/git-${version}.tbz"; + sha256 = "0yyclsh255k7pvc2fcsdi8k2fcrr0by2nz6g3sqnwlimjyp7mz5j"; }; propagatedBuildInputs = [ angstrom astring cstruct decompress digestif encore duff fmt fpath hex ke logs lru ocaml_lwt ocamlgraph ocplib-endian uri rresult ]; @@ -23,6 +21,6 @@ buildDunePackage rec { description = "Git format and protocol in pure OCaml"; license = lib.licenses.isc; maintainers = [ lib.maintainers.vbgl ]; - inherit (src.meta) homepage; + homepage = "https://github.com/mirage/ocaml-git"; }; } diff --git a/pkgs/development/ocaml-modules/gnuplot/default.nix b/pkgs/development/ocaml-modules/gnuplot/default.nix new file mode 100644 index 00000000000..e473273b8da --- /dev/null +++ b/pkgs/development/ocaml-modules/gnuplot/default.nix @@ -0,0 +1,22 @@ +{ stdenv, buildDunePackage, fetchFromBitbucket, gnuplot, core }: + +buildDunePackage rec { + pname = "gnuplot"; + version = "0.5.3"; + + src = fetchFromBitbucket { + owner = "ogu"; + repo = "${pname}-ocaml"; + rev = "release-${version}"; + sha256 = "00sn9g46pj8pfh7faiyxg3pfhq7w9knafyabjr464bh6qz5kiin3"; + }; + + propagatedBuildInputs = [ core gnuplot ]; + + meta = with stdenv.lib; { + inherit (src.meta) homepage; + description = "Ocaml bindings to Gnuplot"; + maintainers = [ maintainers.bcdarwin ]; + license = licenses.lgpl21; + }; +} diff --git a/pkgs/development/ocaml-modules/graphql/cohttp.nix b/pkgs/development/ocaml-modules/graphql/cohttp.nix new file mode 100644 index 00000000000..c6e85da77f3 --- /dev/null +++ b/pkgs/development/ocaml-modules/graphql/cohttp.nix @@ -0,0 +1,24 @@ +{ lib, buildDunePackage, ocaml-crunch +, astring, cohttp, digestif, graphql, ocplib-endian +, alcotest, cohttp-lwt-unix, graphql-lwt +}: + +buildDunePackage rec { + pname = "graphql-cohttp"; + + inherit (graphql) version src; + + nativeBuildInputs = [ ocaml-crunch ]; + propagatedBuildInputs = [ astring cohttp digestif graphql ocplib-endian ]; + + checkInputs = lib.optionals doCheck [ alcotest cohttp-lwt-unix graphql-lwt ]; + + doCheck = true; + + meta = graphql.meta // { + description = "Run GraphQL servers with “cohttp”"; + }; + +} + + diff --git a/pkgs/development/ocaml-modules/graphql/default.nix b/pkgs/development/ocaml-modules/graphql/default.nix new file mode 100644 index 00000000000..22b7bf35f8e --- /dev/null +++ b/pkgs/development/ocaml-modules/graphql/default.nix @@ -0,0 +1,18 @@ +{ lib, buildDunePackage, alcotest, graphql_parser, rresult, yojson }: + +buildDunePackage rec { + pname = "graphql"; + + inherit (graphql_parser) version src; + + propagatedBuildInputs = [ graphql_parser rresult yojson ]; + + checkInputs = lib.optional doCheck alcotest; + + doCheck = true; + + meta = graphql_parser.meta // { + description = "Build GraphQL schemas and execute queries against them"; + }; + +} diff --git a/pkgs/development/ocaml-modules/graphql/lwt.nix b/pkgs/development/ocaml-modules/graphql/lwt.nix new file mode 100644 index 00000000000..37d75f9e22e --- /dev/null +++ b/pkgs/development/ocaml-modules/graphql/lwt.nix @@ -0,0 +1,19 @@ +{ lib, buildDunePackage, alcotest, graphql, ocaml_lwt }: + +buildDunePackage rec { + pname = "graphql-lwt"; + + inherit (graphql) version src; + + propagatedBuildInputs = [ graphql ocaml_lwt ]; + + checkInputs = lib.optional doCheck alcotest; + + doCheck = true; + + meta = graphql.meta // { + description = "Build GraphQL schemas with Lwt support"; + }; + +} + diff --git a/pkgs/development/ocaml-modules/graphql/parser.nix b/pkgs/development/ocaml-modules/graphql/parser.nix new file mode 100644 index 00000000000..4172ccd8d04 --- /dev/null +++ b/pkgs/development/ocaml-modules/graphql/parser.nix @@ -0,0 +1,28 @@ +{ lib, buildDunePackage, fetchurl, alcotest, fmt, menhir, re }: + +buildDunePackage rec { + pname = "graphql_parser"; + version = "0.13.0"; + + minimumOCamlVersion = "4.03"; + + src = fetchurl { + url = "https://github.com/andreas/ocaml-graphql-server/releases/download/${version}/graphql-${version}.tbz"; + sha256 = "0gb5y99ph0nz5y3pc1gxq1py4wji2hyf2ydbp0hv23v00n50hpsm"; + }; + + nativeBuildInputs = [ menhir ]; + propagatedBuildInputs = [ fmt re ]; + + checkInputs = lib.optional doCheck alcotest; + + doCheck = true; + + meta = { + homepage = "https://github.com/andreas/ocaml-graphql-server"; + description = "Library for parsing GraphQL queries"; + license = lib.licenses.mit; + maintainers = [ lib.maintainers.vbgl ]; + }; + +} diff --git a/pkgs/development/ocaml-modules/iter/default.nix b/pkgs/development/ocaml-modules/iter/default.nix index eb2ca1409ab..964a7c6f5a3 100644 --- a/pkgs/development/ocaml-modules/iter/default.nix +++ b/pkgs/development/ocaml-modules/iter/default.nix @@ -11,7 +11,7 @@ buildDunePackage rec { sha256 = "0j2sg50byn0ppmf6l36ksip7zx1d3gv7sc4hbbxs2rmx39jr7vxh"; }; - buildInputs = lib.optionals doCheck [ mdx qtest ]; + buildInputs = lib.optionals doCheck [ mdx.bin qtest ]; propagatedBuildInputs = [ result ]; doCheck = lib.versionAtLeast ocaml.version "4.04"; diff --git a/pkgs/development/ocaml-modules/logs/default.nix b/pkgs/development/ocaml-modules/logs/default.nix index a89f66477fa..50d68520fab 100644 --- a/pkgs/development/ocaml-modules/logs/default.nix +++ b/pkgs/development/ocaml-modules/logs/default.nix @@ -10,12 +10,12 @@ then throw "logs is not available for OCaml ${ocaml.version}" else stdenv.mkDerivation rec { - name = "ocaml-${pname}-${version}"; - version = "0.6.3"; + name = "ocaml${ocaml.version}-${pname}-${version}"; + version = "0.7.0"; src = fetchurl { url = "${webpage}/releases/${pname}-${version}.tbz"; - sha256 = "1lkhr7i44xw4kpfbhgj3rbqy3dv5bfm4kyrbl8a9rfafddcxlwss"; + sha256 = "1jnmd675wmsmdwyb5mx5b0ac66g4c6gpv5s4mrx2j6pb0wla1x46"; }; nativeBuildInputs = [ ocaml findlib ocamlbuild ]; diff --git a/pkgs/development/ocaml-modules/lua-ml/default.nix b/pkgs/development/ocaml-modules/lua-ml/default.nix new file mode 100644 index 00000000000..a0db995827a --- /dev/null +++ b/pkgs/development/ocaml-modules/lua-ml/default.nix @@ -0,0 +1,32 @@ +{ stdenv, fetchFromGitHub, ocaml, findlib, ocamlbuild, dune }: + +if !stdenv.lib.versionAtLeast ocaml.version "4.07" +then throw "lua-ml is not available for OCaml ${ocaml.version}" +else + +stdenv.mkDerivation rec { + pname = "lua-ml"; + name = "ocaml${ocaml.version}-${pname}-${version}"; + version = "0.9"; + + src = fetchFromGitHub { + owner = "lindig"; + repo = pname; + rev = "${version}"; + sha256 = "09lj6qykg15fdf65in7xdry0jcifcr8vqbvz85v12gwfckmmxjir"; + }; + + buildInputs = [ ocaml findlib ocamlbuild ]; + + buildFlags = [ "lib" ]; + + inherit (dune) installPhase; + + meta = { + description = "An embeddable Lua 2.5 interpreter implemented in OCaml"; + inherit (src.meta) homepage; + inherit (ocaml.meta) platforms; + license = stdenv.lib.licenses.bsd2; + maintainers = [ stdenv.lib.maintainers.vbgl ]; + }; +} diff --git a/pkgs/development/ocaml-modules/mdx/default.nix b/pkgs/development/ocaml-modules/mdx/default.nix index 0b43cf461e0..43c6c8e41fa 100644 --- a/pkgs/development/ocaml-modules/mdx/default.nix +++ b/pkgs/development/ocaml-modules/mdx/default.nix @@ -1,24 +1,30 @@ -{ lib, fetchFromGitHub, buildDunePackage, ocaml, astring, cmdliner, cppo, fmt, logs, ocaml-migrate-parsetree, ocaml_lwt, pandoc, re }: +{ lib, fetchurl, buildDunePackage, opaline, ocaml +, astring, cmdliner, cppo, fmt, logs, ocaml-migrate-parsetree, ocaml-version, ocaml_lwt, pandoc, re }: buildDunePackage rec { pname = "mdx"; - version = "1.4.0"; + version = "1.5.0"; - src = fetchFromGitHub { - owner = "realworldocaml"; - repo = pname; - rev = version; - sha256 = "0ljd00d261s2wf7cab086asqi39icf9zs4nylni6dldaqb027d4w"; + src = fetchurl { + url = "https://github.com/realworldocaml/mdx/releases/download/1.5.0/mdx-1.5.0.tbz"; + sha256 = "0g45plf4z7d178gp0bx7842fwbd3m19679yfph3s95da6mrfm3xn"; }; nativeBuildInputs = [ cppo ]; - buildInputs = [ astring cmdliner fmt logs ocaml-migrate-parsetree re ]; + buildInputs = [ cmdliner ]; + propagatedBuildInputs = [ astring fmt logs ocaml-migrate-parsetree ocaml-version re ]; checkInputs = lib.optionals doCheck [ ocaml_lwt pandoc ]; - doCheck = !lib.versionAtLeast ocaml.version "4.08"; + doCheck = true; dontStrip = lib.versions.majorMinor ocaml.version == "4.04"; + outputs = [ "bin" "lib" "out" ]; + + installPhase = '' + ${opaline}/bin/opaline -prefix $bin -libdir $lib/lib/ocaml/${ocaml.version}/site-lib + ''; + meta = { homepage = https://github.com/realworldocaml/mdx; description = "Executable OCaml code blocks inside markdown files"; diff --git a/pkgs/development/ocaml-modules/nocrypto/default.nix b/pkgs/development/ocaml-modules/nocrypto/default.nix index bed872ed08d..833da3bb67c 100644 --- a/pkgs/development/ocaml-modules/nocrypto/default.nix +++ b/pkgs/development/ocaml-modules/nocrypto/default.nix @@ -52,8 +52,8 @@ stdenv.mkDerivation rec { ]; nativeBuildInputs = [ ocaml findlib ocamlbuild cc-wrapper ]; - buildInputs = [ ocamlbuild findlib topkg cpuid ocb-stubblr ppx_deriving ]; - propagatedBuildInputs = [ cstruct ppx_sexp_conv sexplib zarith ] ++ optional withLwt cstruct-lwt; + buildInputs = [ ocamlbuild findlib topkg cpuid ocb-stubblr ]; + propagatedBuildInputs = [ cstruct ppx_deriving ppx_sexp_conv sexplib zarith ] ++ optional withLwt cstruct-lwt; buildPhase = "${topkg.buildPhase} --with-lwt ${boolToString withLwt}"; inherit (topkg) installPhase; diff --git a/pkgs/development/ocaml-modules/ocaml-version/default.nix b/pkgs/development/ocaml-modules/ocaml-version/default.nix new file mode 100644 index 00000000000..45761e98049 --- /dev/null +++ b/pkgs/development/ocaml-modules/ocaml-version/default.nix @@ -0,0 +1,22 @@ +{ lib, fetchurl, buildDunePackage, result }: + +buildDunePackage rec { + + pname = "ocaml-version"; + version = "2.3.0"; + + src = fetchurl { + url = "https://github.com/ocurrent/ocaml-version/releases/download/v${version}/ocaml-version-v${version}.tbz"; + sha256 = "0c711lifl35xila9k0rvhijy9zm3shd37q3jgw7xf01hn1swg0hn"; + }; + + propagatedBuildInputs = [ result ]; + + meta = { + description = "Manipulate, parse and generate OCaml compiler version strings"; + homepage = "https://github.com/ocurrent/ocaml-version"; + license = lib.licenses.isc; + maintainers = [ lib.maintainers.vbgl ]; + }; + +} diff --git a/pkgs/development/ocaml-modules/owl-base/default.nix b/pkgs/development/ocaml-modules/owl-base/default.nix index b2546f3e93c..efdd2a28412 100644 --- a/pkgs/development/ocaml-modules/owl-base/default.nix +++ b/pkgs/development/ocaml-modules/owl-base/default.nix @@ -1,4 +1,4 @@ -{ stdenv, buildDunePackage, fetchFromGitHub, integers, stdlib-shims }: +{ stdenv, buildDunePackage, fetchFromGitHub, stdlib-shims }: buildDunePackage rec { pname = "owl-base"; diff --git a/pkgs/development/ocaml-modules/owl/default.nix b/pkgs/development/ocaml-modules/owl/default.nix index 95d4f6da704..eedfdba34ed 100644 --- a/pkgs/development/ocaml-modules/owl/default.nix +++ b/pkgs/development/ocaml-modules/owl/default.nix @@ -7,9 +7,8 @@ buildDunePackage rec { inherit (owl-base) version src meta; - buildInputs = [ eigen ]; checkInputs = [ alcotest ]; - propagatedBuildInputs = [ stdio stdlib-shims openblasCompat owl-base ]; + propagatedBuildInputs = [ eigen stdio stdlib-shims openblasCompat owl-base ]; # tests not enabled for now due to owlbarn/owl/issues/460 } diff --git a/pkgs/development/ocaml-modules/phylogenetics/default.nix b/pkgs/development/ocaml-modules/phylogenetics/default.nix new file mode 100644 index 00000000000..e665a323578 --- /dev/null +++ b/pkgs/development/ocaml-modules/phylogenetics/default.nix @@ -0,0 +1,28 @@ +{ stdenv, buildDunePackage, fetchFromGitHub, ppx_deriving +, alcotest, biocaml, gnuplot, lacaml, menhir, owl }: + +buildDunePackage rec { + pname = "phylogenetics"; + version = "unstable-2019-11-15"; + + src = fetchFromGitHub { + owner = "biocaml"; + repo = pname; + rev = "91c03834db065cf4a86f33affbb9cfd216defc9f"; + sha256 = "0i9m0633a6a724as35ix8z3p1gj267cl0hmqrpw4qfq39zxmgnxb"; + }; + + minimumOCamlVersion = "4.08"; # e.g., uses Float.min + + checkInputs = [ alcotest ]; + propagatedBuildInputs = [ biocaml gnuplot lacaml menhir owl ppx_deriving ]; + + doCheck = false; # many tests require bppsuite + + meta = with stdenv.lib; { + inherit (std.meta) homepage; + description = "Bioinformatics library for Ocaml"; + maintainers = [ maintainers.bcdarwin ]; + license = licenses.cecill-b; + }; +} diff --git a/pkgs/development/ocaml-modules/ppx_deriving_rpc/default.nix b/pkgs/development/ocaml-modules/ppx_deriving_rpc/default.nix index 7746200d4ff..92d73e540f4 100644 --- a/pkgs/development/ocaml-modules/ppx_deriving_rpc/default.nix +++ b/pkgs/development/ocaml-modules/ppx_deriving_rpc/default.nix @@ -1,11 +1,11 @@ -{ lib, buildDunePackage, rpclib, ppxfind, ppx_deriving, cppo }: +{ lib, buildDunePackage, rpclib, ppxlib, ppx_deriving }: buildDunePackage rec { pname = "ppx_deriving_rpc"; inherit (rpclib) version src; - buildInputs = [ ppxfind cppo ]; + buildInputs = [ ppxlib ]; propagatedBuildInputs = [ rpclib ppx_deriving ]; diff --git a/pkgs/development/ocaml-modules/printbox/default.nix b/pkgs/development/ocaml-modules/printbox/default.nix index 50866e1d969..555ccef3495 100644 --- a/pkgs/development/ocaml-modules/printbox/default.nix +++ b/pkgs/development/ocaml-modules/printbox/default.nix @@ -13,7 +13,7 @@ buildDunePackage rec { sha256 = "16nwwpp13hzlcm9xqfxc558afm3i5s802dkj69l9s2vp04lgms5n"; }; - checkInputs = lib.optional doCheck mdx; + checkInputs = lib.optional doCheck mdx.bin; doCheck = !lib.versionAtLeast ocaml.version "4.08"; diff --git a/pkgs/development/ocaml-modules/rpclib/default.nix b/pkgs/development/ocaml-modules/rpclib/default.nix index 2b4ab181859..a4134f592b3 100644 --- a/pkgs/development/ocaml-modules/rpclib/default.nix +++ b/pkgs/development/ocaml-modules/rpclib/default.nix @@ -1,8 +1,8 @@ -{ stdenv, fetchFromGitHub, buildDunePackage, alcotest, cmdliner, rresult, result, xmlm, yojson }: +{ lib, fetchFromGitHub, buildDunePackage, alcotest, cmdliner, rresult, result, xmlm, yojson }: buildDunePackage rec { pname = "rpclib"; - version = "5.9.0"; + version = "6.0.0"; minimumOCamlVersion = "4.04"; @@ -10,7 +10,7 @@ buildDunePackage rec { owner = "mirage"; repo = "ocaml-rpc"; rev = "v${version}"; - sha256 = "1swnnmmnkn53mxqpckdnd1j8bz0wksqznjbv0zamspxyqybmancq"; + sha256 = "0bmr20sj7kybjjlwd42irj0f5zlnxcw7mxa1mdgxkki9bmhsqr51"; }; buildInputs = [ alcotest cmdliner yojson ]; @@ -18,7 +18,7 @@ buildDunePackage rec { doCheck = true; - meta = with stdenv.lib; { + meta = with lib; { homepage = "https://github.com/mirage/ocaml-rpc"; description = "Light library to deal with RPCs in OCaml"; license = licenses.isc; diff --git a/pkgs/development/ocaml-modules/webmachine/default.nix b/pkgs/development/ocaml-modules/webmachine/default.nix new file mode 100644 index 00000000000..79e36b66d11 --- /dev/null +++ b/pkgs/development/ocaml-modules/webmachine/default.nix @@ -0,0 +1,32 @@ +{ lib, buildDunePackage, fetchFromGitHub +, cohttp, dispatch, ptime +, ounit +}: + +buildDunePackage rec { + pname = "webmachine"; + version = "0.6.1"; + + minimumOCamlVersion = "4.04"; + + src = fetchFromGitHub { + owner = "inhabitedtype"; + repo = "ocaml-webmachine"; + rev = "${version}"; + sha256 = "0kpbxsvjzylbxmxag77k1c8m8mwn4f4xscqk2i7fc591llgq9fp3"; + }; + + propagatedBuildInputs = [ cohttp dispatch ptime ]; + + checkInputs = lib.optional doCheck ounit; + + doCheck = true; + + meta = { + inherit (src.meta) homepage; + license = lib.licenses.bsd3; + description = "A REST toolkit for OCaml"; + maintainers = [ lib.maintainers.vbgl ]; + }; + +} diff --git a/pkgs/development/perl-modules/MNI/default.nix b/pkgs/development/perl-modules/MNI/default.nix index def32abf881..7057883e637 100644 --- a/pkgs/development/perl-modules/MNI/default.nix +++ b/pkgs/development/perl-modules/MNI/default.nix @@ -16,6 +16,7 @@ buildPerlPackage { doCheck = false; # TODO: almost all tests fail ... is this a real problem? meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/mni-perllib"; license = with licenses; [ artistic1 gpl1Plus ]; maintainers = with maintainers; [ bcdarwin ]; }; diff --git a/pkgs/development/perl-modules/Mozilla-LDAP/default.nix b/pkgs/development/perl-modules/Mozilla-LDAP/default.nix index 41025e26f97..6c3d01a3462 100644 --- a/pkgs/development/perl-modules/Mozilla-LDAP/default.nix +++ b/pkgs/development/perl-modules/Mozilla-LDAP/default.nix @@ -12,6 +12,7 @@ buildPerlPackage rec { }; meta = { description = "Mozilla's ldap client library"; + homepage = "https://metacpan.org/release/perldap"; license = with lib.licenses; [ mpl20 lgpl21Plus gpl2Plus ]; }; } diff --git a/pkgs/development/perl-modules/strip-nondeterminism/default.nix b/pkgs/development/perl-modules/strip-nondeterminism/default.nix index 3e638bfb193..7ac0b82ed10 100644 --- a/pkgs/development/perl-modules/strip-nondeterminism/default.nix +++ b/pkgs/development/perl-modules/strip-nondeterminism/default.nix @@ -27,6 +27,7 @@ buildPerlPackage rec { meta = with lib; { description = "A Perl module for stripping bits of non-deterministic information"; + homepage = "https://reproducible-builds.org/"; license = licenses.gpl3; maintainers = with maintainers; [ pSub ]; }; diff --git a/pkgs/development/python-modules/Rtree/default.nix b/pkgs/development/python-modules/Rtree/default.nix index 7953829465b..1ac721874da 100644 --- a/pkgs/development/python-modules/Rtree/default.nix +++ b/pkgs/development/python-modules/Rtree/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "Rtree"; - version = "0.8.3"; + version = "0.9.2"; src = fetchPypi { inherit pname version; - sha256 = "0jc62jbcqqpjcwcly7l9zk25bg72mrxmjykpvfiscgln00qczfbc"; + sha256 = "6a34b25f588e1563e45af251a8469b43a125d972eb2fa66e9ce96ed29f06c454"; }; propagatedBuildInputs = [ libspatialindex ]; diff --git a/pkgs/development/python-modules/Wand/default.nix b/pkgs/development/python-modules/Wand/default.nix index 6ff6a7b9f07..a7fe193c62f 100644 --- a/pkgs/development/python-modules/Wand/default.nix +++ b/pkgs/development/python-modules/Wand/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "Wand"; - version = "0.5.7"; + version = "0.5.8"; src = fetchPypi { inherit pname version; - sha256 = "0wvqzppflph3fkgkyv3k11ga28fv1g1bz8sbf227d7pql8c6ia8k"; + sha256 = "0sjdlfhw1wdjqpmr72mckf2njy9xigx51shl510jhvl418cja2bd"; }; postPatch = '' diff --git a/pkgs/development/python-modules/aioeventlet/default.nix b/pkgs/development/python-modules/aioeventlet/default.nix index 5df19e92e8d..0582a59eae8 100644 --- a/pkgs/development/python-modules/aioeventlet/default.nix +++ b/pkgs/development/python-modules/aioeventlet/default.nix @@ -28,7 +28,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "aioeventlet implements the asyncio API (PEP 3156) on top of eventlet. It makes"; - homepage = https://aioeventlet.readthedocs.org/; + homepage = "https://pypi.org/project/aioeventlet/"; license = licenses.asl20; }; diff --git a/pkgs/development/python-modules/aiokafka/default.nix b/pkgs/development/python-modules/aiokafka/default.nix new file mode 100644 index 00000000000..b31f83dc136 --- /dev/null +++ b/pkgs/development/python-modules/aiokafka/default.nix @@ -0,0 +1,49 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, isPy27 +, kafka-python +, cython +, zlib +}: + +buildPythonPackage rec { + pname = "aiokafka"; + version = "0.5.2"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "aio-libs"; + repo = "aiokafka"; + rev = "v${version}"; + sha256 = "062kqsq75fi5pbpqf2a8nxm43pxpr6bwplg6bp4nv2a68r850pki"; + }; + + nativeBuildInputs = [ + cython + ]; + + buildInputs = [ + zlib + ]; + + propagatedBuildInputs = [ + kafka-python + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace "kafka-python==1.4.6" "kafka-python" + ''; + + # checks require running kafka server + doCheck = false; + + meta = with lib; { + description = "Kafka integration with asyncio"; + homepage = https://aiokafka.readthedocs.org; + license = licenses.asl20; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/aioredis/default.nix b/pkgs/development/python-modules/aioredis/default.nix index af089472d93..7769f543754 100644 --- a/pkgs/development/python-modules/aioredis/default.nix +++ b/pkgs/development/python-modules/aioredis/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "aioredis"; - version = "1.3.0"; + version = "1.3.1"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "86da2748fb0652625a8346f413167f078ec72bdc76e217db7e605a059cd56e86"; + sha256 = "0fi7jd5hlx8cnv1m97kv9hc4ih4l8v15wzkqwsp73is4n0qazy0m"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/aiorun/default.nix b/pkgs/development/python-modules/aiorun/default.nix new file mode 100644 index 00000000000..7e38bb76873 --- /dev/null +++ b/pkgs/development/python-modules/aiorun/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, isPy27 +, pytest +, pytestcov +, uvloop +}: + +buildPythonPackage rec { + pname = "aiorun"; + version = "2019.11.1"; + format = "flit"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = "cjrh"; + repo = pname; + rev = "v${version}"; + sha256 = "04p3sci6af6qqfkcqamsqhmqqrigcwvl4bmx8yv5ppvkyq39pxi7"; + }; + + checkInputs = [ + pytest + pytestcov + uvloop + ]; + + # allow for writable directory for darwin + preBuild = '' + export HOME=$TMPDIR + ''; + + checkPhase = '' + pytest + ''; + + meta = with lib; { + description = "Boilerplate for asyncio applications"; + homepage = https://github.com/cjrh/aiorun; + license = licenses.asl20; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/ansible/default.nix b/pkgs/development/python-modules/ansible/default.nix index 74775cf756f..96be51e82f0 100644 --- a/pkgs/development/python-modules/ansible/default.nix +++ b/pkgs/development/python-modules/ansible/default.nix @@ -18,13 +18,13 @@ buildPythonPackage rec { pname = "ansible"; - version = "2.8.4"; + version = "2.8.7"; src = fetchFromGitHub { owner = "ansible"; repo = "ansible"; rev = "v${version}"; - sha256 = "1fp7zz8awfv70nn8i6x0ggx4472377hm7787x16qv2kz4nb069ki"; + sha256 = "08vqjk85j0g1x0iad03d7ysws433dikii8j2lr3a1mlx6d186vv8"; }; prePatch = '' diff --git a/pkgs/development/python-modules/apprise/default.nix b/pkgs/development/python-modules/apprise/default.nix index 086273679b1..6ac9acfac32 100644 --- a/pkgs/development/python-modules/apprise/default.nix +++ b/pkgs/development/python-modules/apprise/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "apprise"; - version = "0.8.1"; + version = "0.8.2"; src = fetchPypi { inherit pname version; - sha256 = "7a26fa03c4b83f03f17e8f8fc0b94d5502a12dc2e39b48e93a0ab0fd93151a95"; + sha256 = "0m0pddqrpfm526f0fyzzjpcp7hi3d6pj0bgk2vl004lkas4li1hw"; }; nativeBuildInputs = [ Babel ]; diff --git a/pkgs/development/python-modules/aresponses/default.nix b/pkgs/development/python-modules/aresponses/default.nix index 9e64d2f65ff..472911340ad 100644 --- a/pkgs/development/python-modules/aresponses/default.nix +++ b/pkgs/development/python-modules/aresponses/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "aresponses"; - version = "1.1.1"; + version = "1.1.2"; src = fetchPypi { inherit pname version; - sha256 = "d1d6ef52b9a97142d106688cf9b112602ef3dc66f6368de8f91f47241d8cfc9c"; + sha256 = "20a63536d86af6f31f9b0720c561bdc595b6bfe071940e347ab58b11caff9e1b"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/argcomplete/default.nix b/pkgs/development/python-modules/argcomplete/default.nix index 1c0efb4da3b..6f978778f7d 100644 --- a/pkgs/development/python-modules/argcomplete/default.nix +++ b/pkgs/development/python-modules/argcomplete/default.nix @@ -3,11 +3,11 @@ }: buildPythonPackage rec { pname = "argcomplete"; - version = "1.10.2"; + version = "1.10.3"; src = fetchPypi { inherit pname version; - sha256 = "ec88b5ccefe2d47d8f14916a006431d0afb756751ee5c46f28654a7d8a69be53"; + sha256 = "a37f522cf3b6a34abddfedb61c4546f60023b3799b22d1cd971eacdc0861530a"; }; doCheck = false; # bash-completion test fails with "compgen: command not found". diff --git a/pkgs/development/python-modules/arrayqueues/default.nix b/pkgs/development/python-modules/arrayqueues/default.nix new file mode 100644 index 00000000000..82c8fc93267 --- /dev/null +++ b/pkgs/development/python-modules/arrayqueues/default.nix @@ -0,0 +1,25 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k +, numpy +}: + +buildPythonPackage rec { + pname = "arrayqueues"; + version = "1.2.0b0"; + disabled = !isPy3k; + + src = fetchPypi { + inherit pname version; + sha256 = "1gvrxb2rw0dk469wq5azylar7hhanfp07gl5mc6ajdbgz9gsd6ln"; + }; + + propagatedBuildInputs = [ + numpy + ]; + + meta = { + homepage = "https://github.com/portugueslab/arrayqueues"; + description = "Multiprocessing queues for numpy arrays using shared memory"; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/arviz/default.nix b/pkgs/development/python-modules/arviz/default.nix new file mode 100644 index 00000000000..ba941503548 --- /dev/null +++ b/pkgs/development/python-modules/arviz/default.nix @@ -0,0 +1,80 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, emcee +, matplotlib +, netcdf4 +, numba +, numpy +, pandas +, pytest +, scipy +, setuptools +, tensorflow-probability +, xarray +#, h5py (used by disabled tests) +#, pymc3 (broken) +#, pyro-ppl (broken) +#, pystan (not packaged) +#, numpyro (not packaged) +}: + +buildPythonPackage rec { + pname = "arviz"; + version = "0.5.1"; + + src = fetchFromGitHub { + owner = "arviz-devs"; + repo = "arviz"; + rev = version; + sha256 = "0p600cakix24wz2ridnzy6sp3l1p2kr5s60qc7s82wpv7fw0i9ry"; + }; + + propagatedBuildInputs = [ + # needed to install + matplotlib + netcdf4 + pandas + xarray + # needed to import + setuptools + # not needed to import, but used by many functions + # and is listed as a dependency in the documentation + numpy + scipy + ]; + + checkInputs = [ + emcee + numba + pytest + tensorflow-probability + #h5py (used by disabled tests) + #pymc3 (broken) + #pyro-ppl (broken) + #pystan (not packaged) + #numpyro (not packaged) + ]; + + # check requires pymc3 and pyro-ppl, which are currently broken, and pystan + # and numpyro, which are not yet packaged, some checks also need to make + # directories and do not have permission to do so. So we can only check part + # of the package + # Additionally, there are some failures with the plots test, which revolve + # around attempting to output .mp4 files through an interface that only wants + # to output .html files. + # The following test have been disabled as a result: data_cmdstanpy, + # data_numpyro, data_pyro, data_pystan, and plots. + checkPhase = '' + cd arviz/tests/ + HOME=$TMPDIR pytest test_{data_cmdstan,data_emcee,data,data_tfp,\ + diagnostics,plot_utils,rcparams,stats,stats_utils,utils}.py + ''; + + meta = with lib; { + description = "ArviZ is a Python package for exploratory analysis of Bayesian models"; + homepage = "https://arviz-devs.github.io/arviz/"; + license = licenses.asl20; + maintainers = [ maintainers.omnipotententity ]; + }; +} diff --git a/pkgs/development/python-modules/astor/default.nix b/pkgs/development/python-modules/astor/default.nix index 21eeead88ca..e8ea8c37cd9 100644 --- a/pkgs/development/python-modules/astor/default.nix +++ b/pkgs/development/python-modules/astor/default.nix @@ -1,22 +1,14 @@ -{ stdenv, buildPythonPackage, fetchPypi, isPy27, pytest, fetchpatch }: +{ lib, buildPythonPackage, fetchPypi, isPy27, pytest, fetchpatch }: buildPythonPackage rec { pname = "astor"; - version = "0.8.0"; + version = "0.8.1"; src = fetchPypi { inherit pname version; - sha256 = "0qkq5bf13fqcwablg0nk7rx83izxdizysd42n26j5wbingcfx9ip"; + sha256 = "0ppscdzzvxpznclkmhhj53iz314x3pfv4yc7c6gwxqgljgdgyvka"; }; - # fix packaging for setuptools>=41.4 - patches = [ - ( fetchpatch { - url = "https://github.com/berkerpeksag/astor/pull/163/commits/bd697678674aafcf3f7b1c06af67df181ed584e2.patch"; - sha256 = "1m4szdyzalngd5klanmpjx5smgpc7rl5klky0lc0yhwbx210mla6"; - }) - ]; - # disable tests broken with python3.6: https://github.com/berkerpeksag/astor/issues/89 checkInputs = [ pytest ]; checkPhase = '' @@ -28,7 +20,7 @@ buildPythonPackage rec { and not test_codegen_from_root' ''; - meta = with stdenv.lib; { + meta = with lib; { description = "Library for reading, writing and rewriting python AST"; homepage = https://github.com/berkerpeksag/astor; license = licenses.bsd3; diff --git a/pkgs/development/python-modules/astropy-healpix/default.nix b/pkgs/development/python-modules/astropy-healpix/default.nix index 2027f694c77..4300165470c 100644 --- a/pkgs/development/python-modules/astropy-healpix/default.nix +++ b/pkgs/development/python-modules/astropy-healpix/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "astropy-healpix"; - version = "0.4"; + version = "0.5"; doCheck = false; # tests require pytest-astropy src = fetchPypi { inherit pname version; - sha256 = "8c9709ac923759c92eca6d2e623e734d0f417eed40ba835b77d99dec09e51aa2"; + sha256 = "1bfdq33mj6mwk5fkc6n23f9bc9z8j7kmvql3zchz4h58jskmvqas"; }; propagatedBuildInputs = [ numpy astropy astropy-helpers ]; diff --git a/pkgs/development/python-modules/awkward/default.nix b/pkgs/development/python-modules/awkward/default.nix index 5757b7fb15c..2c5d562657b 100644 --- a/pkgs/development/python-modules/awkward/default.nix +++ b/pkgs/development/python-modules/awkward/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "awkward"; - version = "0.12.16"; + version = "0.12.17"; src = fetchPypi { inherit pname version; - sha256 = "df5380b96dc9c1b129e68057578e4a2d42d9b73a0ae97ff263a9072baf8f7a5e"; + sha256 = "f794c926e726b3545035ffcb8e6defe6a4ea975c6266c0154024e4591739a253"; }; nativeBuildInputs = [ pytestrunner ]; diff --git a/pkgs/development/python-modules/awkward1/default.nix b/pkgs/development/python-modules/awkward1/default.nix new file mode 100644 index 00000000000..6b515b56713 --- /dev/null +++ b/pkgs/development/python-modules/awkward1/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchPypi +, cmake +, numba +, numpy +, pytest +, rapidjson +}: + +buildPythonPackage rec { + pname = "awkward1"; + version = "0.1.28"; + + src = fetchPypi { + inherit pname version; + sha256 = "2269aca04c827549435e24f9976d27e904d02b74a30caa9a2a463225a8ba1609"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ rapidjson ]; + propagatedBuildInputs = [ numpy ]; + + dontUseCmakeConfigure = true; + + checkInputs = [ pytest numba ]; + checkPhase = '' + py.test + ''; + + meta = with lib; { + description = "Development of awkward 1.0, to replace scikit-hep/awkward-array in 2020"; + homepage = "https://github.com/scikit-hep/awkward-1.0"; + license = licenses.bsd3; + maintainers = with maintainers; [ veprbl ]; + }; +} diff --git a/pkgs/development/python-modules/aws-adfs/default.nix b/pkgs/development/python-modules/aws-adfs/default.nix index 428ac495941..0c16480e9c4 100644 --- a/pkgs/development/python-modules/aws-adfs/default.nix +++ b/pkgs/development/python-modules/aws-adfs/default.nix @@ -1,13 +1,15 @@ { lib, buildPythonPackage, fetchPypi -, pytest, pytestrunner, pytestcov, mock, glibcLocales, lxml, boto3, requests, click, configparser }: +, pytest, pytestrunner, pytestcov, mock, glibcLocales, lxml, boto3 +, requests, click, configparser, fido2, isPy27 }: buildPythonPackage rec { pname = "aws-adfs"; - version = "1.19.1"; + version = "1.20.0"; + disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "20b2ad44d19aa494fa11cb2d1290359b3a7a0c6c8908179b4af0c9367d83e370"; + sha256 = "1j18ffq5z8bcajavnlpbfhxrcadld5iv5gsfxg543yvdsp6hn2dg"; }; # Relax version constraint @@ -22,7 +24,7 @@ buildPythonPackage rec { LC_ALL = "en_US.UTF-8"; checkInputs = [ glibcLocales pytest pytestrunner pytestcov mock ]; - propagatedBuildInputs = [ lxml boto3 requests click configparser ]; + propagatedBuildInputs = [ lxml boto3 requests click configparser fido2 ]; meta = with lib; { description = "Command line tool to ease aws cli authentication against ADFS"; diff --git a/pkgs/development/python-modules/aws-xray-sdk/default.nix b/pkgs/development/python-modules/aws-xray-sdk/default.nix index 8c421532288..c0ca6908586 100644 --- a/pkgs/development/python-modules/aws-xray-sdk/default.nix +++ b/pkgs/development/python-modules/aws-xray-sdk/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "aws-xray-sdk"; - version = "2.4.2"; + version = "2.4.3"; src = fetchPypi { inherit pname version; - sha256 = "ce4adb60fe67ebe91f2fc57d5067b4e44df6e233652987be4fb2e549688cf9fe"; + sha256 = "263a38f3920d9dc625e3acb92e6f6d300f4250b70f538bd009ce6e485676ab74"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/azure-mgmt-netapp/default.nix b/pkgs/development/python-modules/azure-mgmt-netapp/default.nix index 79a3a19778d..8e18986bfcb 100644 --- a/pkgs/development/python-modules/azure-mgmt-netapp/default.nix +++ b/pkgs/development/python-modules/azure-mgmt-netapp/default.nix @@ -5,13 +5,13 @@ }: buildPythonPackage rec { - version = "0.6.0"; + version = "0.7.0"; pname = "azure-mgmt-netapp"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "10ymvyj386z9bjdm2g1b5a4vfnn87ig2zm6xn2xddvbpy0jxnyfv"; + sha256 = "0cf4pknb5y2yz4jqwg7xm626zkfx8i8hqcr3dkvq21lrx7fz96r3"; extension = "zip"; }; diff --git a/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix b/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix index 3bf18f9b4d4..1f3056b9098 100644 --- a/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix +++ b/pkgs/development/python-modules/azure-mgmt-recoveryservicesbackup/default.nix @@ -9,12 +9,12 @@ buildPythonPackage rec { pname = "azure-mgmt-recoveryservicesbackup"; - version = "0.4.0"; + version = "0.5.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "0zssvzdip23yzaxlac9rlzg9mlyjl97fwr0gj8y27z8j58pwj72i"; + sha256 = "0jhq8fi3dn2cncyv2rrgr4kldd254f30zgwf6p85rdgvg2p9k4hl"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/bcdoc/default.nix b/pkgs/development/python-modules/bcdoc/default.nix index b4db16476d1..b8cbf8537dc 100644 --- a/pkgs/development/python-modules/bcdoc/default.nix +++ b/pkgs/development/python-modules/bcdoc/default.nix @@ -15,7 +15,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = https://github.com/botocore/bcdoc; + homepage = "https://github.com/boto/bcdoc"; license = licenses.asl20; description = "ReST document generation tools for botocore"; }; diff --git a/pkgs/development/python-modules/binwalk/default.nix b/pkgs/development/python-modules/binwalk/default.nix index 88ef71cabdf..ec613527e92 100644 --- a/pkgs/development/python-modules/binwalk/default.nix +++ b/pkgs/development/python-modules/binwalk/default.nix @@ -30,7 +30,7 @@ buildPythonPackage { ++ stdenv.lib.optional visualizationSupport pyqtgraph; meta = with stdenv.lib; { - homepage = "http://binwalk.org"; + homepage = "https://github.com/ReFirmLabs/binwalk"; description = "A tool for searching a given binary image for embedded files"; maintainers = [ maintainers.koral ]; }; diff --git a/pkgs/development/python-modules/boltztrap2/default.nix b/pkgs/development/python-modules/boltztrap2/default.nix index 50f2023418e..df10288905d 100644 --- a/pkgs/development/python-modules/boltztrap2/default.nix +++ b/pkgs/development/python-modules/boltztrap2/default.nix @@ -37,7 +37,7 @@ buildPythonPackage rec { ''; meta = with stdenv.lib; { - homepage = https://www.boltztrap.org/; + homepage = "http://www.boltztrap.org/"; description = "Band-structure interpolator and transport coefficient calculator"; license = licenses.gpl3; maintainers = [ maintainers.costrouc ]; diff --git a/pkgs/development/python-modules/bottle/default.nix b/pkgs/development/python-modules/bottle/default.nix index f36a84b85ca..c0de6eecae9 100644 --- a/pkgs/development/python-modules/bottle/default.nix +++ b/pkgs/development/python-modules/bottle/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "bottle"; - version = "0.12.17"; + version = "0.12.18"; src = fetchPypi { inherit pname version; - sha256 = "e9eaa412a60cc3d42ceb42f58d15864d9ed1b92e9d630b8130c871c5bb16107c"; + sha256 = "0819b74b145a7def225c0e83b16a4d5711fde751cd92bae467a69efce720f69e"; }; propagatedBuildInputs = [ setuptools ]; diff --git a/pkgs/development/python-modules/bottleneck/default.nix b/pkgs/development/python-modules/bottleneck/default.nix index 21492dc152c..f45eea2c5df 100644 --- a/pkgs/development/python-modules/bottleneck/default.nix +++ b/pkgs/development/python-modules/bottleneck/default.nix @@ -1,26 +1,34 @@ -{ buildPythonPackage -, fetchPypi +{ lib, buildPythonPackage, fetchPypi , nose -, pytest , numpy +, pytest , python }: buildPythonPackage rec { pname = "Bottleneck"; - version = "1.2.1"; + version = "1.3.1"; src = fetchPypi { inherit pname version; - sha256 = "6efcde5f830aed64feafca0359b51db0e184c72af8ba6675b4a99f263922eb36"; + sha256 = "0a2a94zahl3kqld2n9dm58fvazz9s52sa16nd8yn5jv20hvqc5a5"; }; - checkInputs = [ pytest nose ]; propagatedBuildInputs = [ numpy ]; - checkPhase = '' - py.test -p no:warnings $out/${python.sitePackages} - ''; + postPatch = '' substituteInPlace setup.py --replace "__builtins__.__NUMPY_SETUP__ = False" "" ''; + + checkInputs = [ pytest nose ]; + checkPhase = '' + py.test -p no:warnings $out/${python.sitePackages} + ''; + + meta = with lib; { + description = "Fast NumPy array functions written in C"; + homepage = "https://github.com/pydata/bottleneck"; + license = licenses.bsd2; + maintainers = with maintainers; [ ]; + }; } diff --git a/pkgs/development/python-modules/bugz/default.nix b/pkgs/development/python-modules/bugz/default.nix index 57ec3728574..abfde52ef5f 100644 --- a/pkgs/development/python-modules/bugz/default.nix +++ b/pkgs/development/python-modules/bugz/default.nix @@ -17,7 +17,7 @@ buildPythonPackage { doCheck = false; meta = with stdenv.lib; { - homepage = http://www.liquidx.net/pybugz/; + homepage = "https://github.com/williamh/pybugz"; description = "Command line interface for Bugzilla"; license = licenses.gpl2; maintainers = [ maintainers.costrouc ]; diff --git a/pkgs/development/python-modules/caldav/default.nix b/pkgs/development/python-modules/caldav/default.nix index 653296a927e..1cb3c2070ec 100644 --- a/pkgs/development/python-modules/caldav/default.nix +++ b/pkgs/development/python-modules/caldav/default.nix @@ -3,13 +3,13 @@ buildPythonPackage rec { pname = "caldav"; - version = "0.6.1"; + version = "0.6.2"; propagatedBuildInputs = [ tzlocal requests vobject lxml nose ]; src = fetchPypi { inherit pname version; - sha256 = "eddb7f4e6a3eb5f02eaa2227817a53ac4372d4c4d51876536f4c6f00282f569e"; + sha256 = "80c33b143539da3a471148ac89512f67d9df3a5286fae5a023e2ad3923246c0d"; }; meta = with lib; { diff --git a/pkgs/development/python-modules/casbin/default.nix b/pkgs/development/python-modules/casbin/default.nix new file mode 100644 index 00000000000..114625c397c --- /dev/null +++ b/pkgs/development/python-modules/casbin/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, simpleeval +, isPy27 +, coveralls +}: + +buildPythonPackage rec { + pname = "casbin"; + version = "0.8.3"; + + disabled = isPy27; + + src = fetchFromGitHub { + owner = pname; + repo = "pycasbin"; + rev = "v${version}"; + sha256 = "1s89m62933m4wprsknwhabgg7irykrcimv80hh2zkyyslz5vbq71"; + }; + + propagatedBuildInputs = [ + simpleeval + ]; + + checkInputs = [ + coveralls + ]; + + checkPhase = '' + coverage run -m unittest discover -s tests -t tests + ''; + + meta = with lib; { + description = "An authorization library that supports access control models like ACL, RBAC, ABAC in Python"; + homepage = https://github.com/casbin/pycasbin; + license = licenses.asl20; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/cassandra-driver/default.nix b/pkgs/development/python-modules/cassandra-driver/default.nix index 26e3e3df324..6fe80e16e12 100644 --- a/pkgs/development/python-modules/cassandra-driver/default.nix +++ b/pkgs/development/python-modules/cassandra-driver/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "cassandra-driver"; - version = "3.19.0"; + version = "3.20.2"; src = fetchPypi { inherit pname version; - sha256 = "1vy9yzsd9c29irq99m8lpkgnc634waai2phvr6b89pmmdirp2wm9"; + sha256 = "03nycyn5nd1pnrg6fffq3wcjqnw13lgja137zq5zszx68mc15wnl"; }; nativeBuildInputs = [ cython ]; diff --git a/pkgs/development/python-modules/catalogue/default.nix b/pkgs/development/python-modules/catalogue/default.nix index f9ad5933843..ad6958e644b 100644 --- a/pkgs/development/python-modules/catalogue/default.nix +++ b/pkgs/development/python-modules/catalogue/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "catalogue"; - version = "0.0.7"; + version = "0.0.8"; src = fetchPypi { inherit pname version; - sha256 = "0m7xp85fg57wi1l1vdsq2k0b8dv5bnfccds33lb04z9vrds4l3jv"; + sha256 = "c407a51c22f51b0f938104b6396c489145bae234386e68eb1d56326c3b3e128e"; }; propagatedBuildInputs = [ importlib-metadata ]; diff --git a/pkgs/development/python-modules/cheroot/default.nix b/pkgs/development/python-modules/cheroot/default.nix index 2f86abd728f..971d8848b37 100644 --- a/pkgs/development/python-modules/cheroot/default.nix +++ b/pkgs/development/python-modules/cheroot/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchPypi, buildPythonPackage, pythonAtLeast +{ stdenv, fetchPypi, buildPythonPackage, pythonAtLeast, isPy3k , more-itertools, six, setuptools_scm, setuptools-scm-git-archive , pytest, pytestcov, portend, pytest-testmon, pytest-mock , backports_unittest-mock, pyopenssl, requests, trustme, requests-unixsocket @@ -10,6 +10,8 @@ buildPythonPackage rec { pname = "cheroot"; version = "8.2.1"; + disabled = !isPy3k; + src = fetchPypi { inherit pname version; sha256 = "5b525b3e4a755adf78070ab54c1821fb860d4255a9317dba2b88eb2df2441cff"; diff --git a/pkgs/development/python-modules/ckcc-protocol/default.nix b/pkgs/development/python-modules/ckcc-protocol/default.nix new file mode 100644 index 00000000000..599f91f2d07 --- /dev/null +++ b/pkgs/development/python-modules/ckcc-protocol/default.nix @@ -0,0 +1,35 @@ +{ stdenv +, buildPythonPackage +, click +, ecdsa +, hidapi +, lib +, fetchPypi +, pytest +, pyaes +, pythonOlder +}: + +buildPythonPackage rec { + pname = "ckcc-protocol"; + version = "0.8.0"; + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "1mbs9l8qycy50j5lq6az7l5d8i40nb0vmlyhcyax298qp6c1r1gh"; + }; + + checkInputs = [ + pytest + ]; + + propagatedBuildInputs = [ click ecdsa hidapi pyaes ]; + + meta = with stdenv.lib; { + description = "Communicate with your Coldcard using Python"; + homepage = https://github.com/Coldcard/ckcc-protocol; + license = licenses.gpl3; + maintainers = [ maintainers.hkjn ]; + }; +} diff --git a/pkgs/development/python-modules/cmd2/default.nix b/pkgs/development/python-modules/cmd2/default.nix index 9e3a9ac1b82..2dba7e43391 100644 --- a/pkgs/development/python-modules/cmd2/default.nix +++ b/pkgs/development/python-modules/cmd2/default.nix @@ -6,11 +6,11 @@ }: buildPythonPackage rec { pname = "cmd2"; - version = "0.9.20"; + version = "0.9.22"; src = fetchPypi { inherit pname version; - sha256 = "0id8247m05xi26xbzg7jj1gcmy91p77wpbbj74v5543z2aplk8qv"; + sha256 = "ba244b07c0b465ff54a6838dc61919599141dc92de1bf00bb0a70875189155e6"; }; LC_ALL="en_US.UTF-8"; diff --git a/pkgs/development/python-modules/coilmq/default.nix b/pkgs/development/python-modules/coilmq/default.nix index 90eb1edc2cd..8b103b55171 100644 --- a/pkgs/development/python-modules/coilmq/default.nix +++ b/pkgs/development/python-modules/coilmq/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Simple, lightweight, and easily extensible STOMP message broker"; - homepage = http://code.google.com/p/coilmq/; + homepage = "https://github.com/hozn/coilmq/"; license = licenses.asl20; }; } diff --git a/pkgs/development/python-modules/colorama/default.nix b/pkgs/development/python-modules/colorama/default.nix index e85c95b85bd..d6f84ca8748 100644 --- a/pkgs/development/python-modules/colorama/default.nix +++ b/pkgs/development/python-modules/colorama/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "colorama"; - version = "0.4.1"; + version = "0.4.3"; src = fetchPypi { inherit pname version; - sha256 = "05eed71e2e327246ad6b38c540c4a3117230b19679b875190486ddd2d721422d"; + sha256 = "e96da0d330793e2cb9485e9ddfd918d456036c7149416295932478192f4436a1"; }; # No tests in archive diff --git a/pkgs/development/python-modules/colored/default.nix b/pkgs/development/python-modules/colored/default.nix index 5b03f8ce9cc..2ccdb03bc22 100644 --- a/pkgs/development/python-modules/colored/default.nix +++ b/pkgs/development/python-modules/colored/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "colored"; - version = "1.4.0"; + version = "1.4.1"; src = fetchPypi { inherit pname version; - sha256 = "0wlsg7z406q31r5fpwkqfpyfpigazbmq9qm856wfbn861k2773zf"; + sha256 = "0qf9470fsasimsmsri13jw1d2zpn3g24fv6vss64jq3ifwfkcs14"; }; # No proper test suite diff --git a/pkgs/development/python-modules/colorspacious/default.nix b/pkgs/development/python-modules/colorspacious/default.nix new file mode 100644 index 00000000000..3ce0bddf1de --- /dev/null +++ b/pkgs/development/python-modules/colorspacious/default.nix @@ -0,0 +1,24 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k +, numpy +}: + +buildPythonPackage rec { + pname = "colorspacious"; + version = "1.1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "065n24zbm9ymy2gvf03vx5cggk1258vcjdaw8jn9v26arpl7542y"; + }; + + propagatedBuildInputs = [ + numpy + ]; + + meta = { + homepage = "https://github.com/njsmith/colorspacious"; + description = "A powerful, accurate, and easy-to-use Python library for doing colorspace conversions "; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/configargparse/default.nix b/pkgs/development/python-modules/configargparse/default.nix index e6959a3304b..82a3aac6e1d 100644 --- a/pkgs/development/python-modules/configargparse/default.nix +++ b/pkgs/development/python-modules/configargparse/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "ConfigArgParse"; - version = "0.15.1"; + version = "0.15.2"; src = fetchPypi { inherit pname version; - sha256 = "baaf0fd2c1c108d007f402dab5481ac5f12d77d034825bf5a27f8224757bd0ac"; + sha256 = "558738aff623d6667aa5b85df6093ad3828867de8a82b66a6d458fb42567beb3"; }; # no tests in tarball diff --git a/pkgs/development/python-modules/consonance/default.nix b/pkgs/development/python-modules/consonance/default.nix new file mode 100644 index 00000000000..3940686f18c --- /dev/null +++ b/pkgs/development/python-modules/consonance/default.nix @@ -0,0 +1,29 @@ +{ buildPythonPackage, lib, fetchFromGitHub, pytest, dissononce, python-axolotl-curve25519 +, transitions, protobuf, nose +}: + +buildPythonPackage rec { + pname = "consonance"; + version = "0.1.3"; + + src = fetchFromGitHub { + owner = "tgalal"; + repo = "consonance"; + rev = version; + sha256 = "1ifs0fq6i41rdna1kszv5sf87qbqx1mn98ffyx4xhw4i9r2grrjv"; + }; + + checkInputs = [ nose ]; + checkPhase = '' + # skipping online test as it requires network with uplink + nosetests tests/test_handshakes_offline.py + ''; + + propagatedBuildInputs = [ dissononce python-axolotl-curve25519 transitions protobuf ]; + + meta = with lib; { + homepage = "https://pypi.org/project/consonance/"; + license = licenses.gpl3; + description = "WhatsApp's handshake implementation using Noise Protocol"; + }; +} diff --git a/pkgs/development/python-modules/crccheck/default.nix b/pkgs/development/python-modules/crccheck/default.nix new file mode 100644 index 00000000000..92a4cc8a841 --- /dev/null +++ b/pkgs/development/python-modules/crccheck/default.nix @@ -0,0 +1,23 @@ +{ stdenv, buildPythonPackage, fetchPypi +, nose }: + +buildPythonPackage rec { + pname = "crccheck"; + version = "0.6"; + + buildInputs = [ nose ]; + + src = fetchPypi { + inherit pname version; + sha256 = "0ckymm6s5kw08i1j35fy2cfha1hyq94pq1kc66brb552qgjs91jn"; + extension = "zip"; + }; + + meta = with stdenv.lib; { + description = "Python library for CRCs and checksums"; + homepage = "https://bitbucket.org/martin_scharrer/crccheck"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/python-modules/cssutils/default.nix b/pkgs/development/python-modules/cssutils/default.nix index 6dd680fe11f..1db154ac1b8 100644 --- a/pkgs/development/python-modules/cssutils/default.nix +++ b/pkgs/development/python-modules/cssutils/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "A Python package to parse and build CSS"; - homepage = http://code.google.com/p/cssutils/; + homepage = "http://cthedot.de/cssutils/"; license = licenses.lgpl3Plus; }; } diff --git a/pkgs/development/python-modules/dask-ml/default.nix b/pkgs/development/python-modules/dask-ml/default.nix index e7e40f7777b..06c5f1753d4 100644 --- a/pkgs/development/python-modules/dask-ml/default.nix +++ b/pkgs/development/python-modules/dask-ml/default.nix @@ -1,6 +1,7 @@ { stdenv , buildPythonPackage , fetchPypi +, pythonOlder , dask , numpy, toolz # dask[array] , numba @@ -19,21 +20,41 @@ }: buildPythonPackage rec { - version = "1.0.0"; + version = "1.1.1"; pname = "dask-ml"; + disabled = pythonOlder "3.6"; # >= 3.6 src = fetchPypi { inherit pname version; - sha256 = "dde926478653bd03a3fbc501d3873a1534836608217b94d04320d1e1c07e59dc"; + sha256 = "1yad9b9hd02rbdf6m1gfj74cjgcbyp7lxdj22d5h5rhv7xa3127x"; }; - checkInputs = [ pytest xgboost tensorflow joblib distributed ]; - propagatedBuildInputs = [ dask numpy toolz numba pandas scikitlearn scipy dask-glm six multipledispatch packaging ]; + propagatedBuildInputs = [ + dask + dask-glm + distributed + multipledispatch + numba + numpy + packaging + pandas + scikitlearn + scipy + six + toolz + ]; - # dask-ml has some heavy test requirements - # and requires some very new packages + # has non-standard build from source, and pypi doesn't include tests doCheck = false; + # in lieu of proper tests + pythonImportsCheck = [ + "dask_ml" + "dask_ml.naive_bayes" + "dask_ml.wrappers" + "dask_ml.utils" + ]; + meta = with stdenv.lib; { homepage = https://github.com/dask/dask-ml; description = "Scalable Machine Learn with Dask"; diff --git a/pkgs/development/python-modules/dask/default.nix b/pkgs/development/python-modules/dask/default.nix index d55595d456f..a857925d7b7 100644 --- a/pkgs/development/python-modules/dask/default.nix +++ b/pkgs/development/python-modules/dask/default.nix @@ -15,13 +15,13 @@ buildPythonPackage rec { pname = "dask"; - version = "2.6.0"; + version = "2.9.0"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "81c7891f0d2e7ac03d1f7fabf1f639360a1db52c03a7155ba9b08e9ee6280f2b"; + sha256 = "1w1hqr8vyx6ygwflj2737dcy0mmgvrc0s602gnny8pzlcbs9m76b"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/ddt/default.nix b/pkgs/development/python-modules/ddt/default.nix index 46a229a99ae..dac72fb72b7 100644 --- a/pkgs/development/python-modules/ddt/default.nix +++ b/pkgs/development/python-modules/ddt/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "ddt"; - version = "1.2.1"; + version = "1.2.2"; src = fetchPypi { inherit pname version; - sha256 = "d13e6af8f36238e89d00f4ebccf2bda4f6d1878be560a6600689e42077e164e3"; + sha256 = "9f79cf234064cf9b43492b72da35c473de3f03163d37bd13cec5bd8d200dda6b"; }; checkInputs = [ nose six pyyaml mock ]; diff --git a/pkgs/development/python-modules/demjson/default.nix b/pkgs/development/python-modules/demjson/default.nix index 265a4cb5712..58f2012aea7 100644 --- a/pkgs/development/python-modules/demjson/default.nix +++ b/pkgs/development/python-modules/demjson/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Encoder/decoder and lint/validator for JSON (JavaScript Object Notation)"; - homepage = http://deron.meranda.us/python/demjson/; + homepage = "https://github.com/dmeranda/demjson"; license = licenses.lgpl3Plus; maintainers = with maintainers; [ bjornfor ]; platforms = platforms.all; diff --git a/pkgs/development/python-modules/diff-match-patch/default.nix b/pkgs/development/python-modules/diff-match-patch/default.nix index 5887575f195..ba33eeda386 100644 --- a/pkgs/development/python-modules/diff-match-patch/default.nix +++ b/pkgs/development/python-modules/diff-match-patch/default.nix @@ -5,7 +5,7 @@ buildPythonPackage rec { version = "20181111"; meta = { - homepage = https://code.google.com/p/google-diff-match-patch/; + homepage = "https://github.com/diff-match-patch-python/diff-match-patch"; description = "Diff, Match and Patch libraries for Plain Text"; license = lib.licenses.asl20; }; diff --git a/pkgs/development/python-modules/dill/default.nix b/pkgs/development/python-modules/dill/default.nix index c1085255c2d..88ffbd32e9d 100644 --- a/pkgs/development/python-modules/dill/default.nix +++ b/pkgs/development/python-modules/dill/default.nix @@ -25,7 +25,7 @@ buildPythonPackage rec { meta = { description = "Serialize all of python (almost)"; - homepage = http://www.cacr.caltech.edu/~mmckerns/dill.htm; + homepage = "https://github.com/uqfoundation/dill/"; license = lib.licenses.bsd3; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/diskcache/default.nix b/pkgs/development/python-modules/diskcache/default.nix index f51e3329aee..6aec01ed738 100644 --- a/pkgs/development/python-modules/diskcache/default.nix +++ b/pkgs/development/python-modules/diskcache/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { meta = with lib; { description = "Disk and file backed persistent cache"; - homepage = https://www.grantjenks.com/docs/diskcache/; + homepage = "http://www.grantjenks.com/docs/diskcache/"; license = licenses.asl20; maintainers = [ maintainers.costrouc ]; }; diff --git a/pkgs/development/python-modules/dissononce/default.nix b/pkgs/development/python-modules/dissononce/default.nix new file mode 100644 index 00000000000..80655e6aa08 --- /dev/null +++ b/pkgs/development/python-modules/dissononce/default.nix @@ -0,0 +1,26 @@ +{ buildPythonPackage, fetchFromGitHub, lib, pytest, cryptography, transitions }: + +buildPythonPackage rec { + pname = "dissononce"; + version = "0.34.3"; + + src = fetchFromGitHub { + owner = "tgalal"; + repo = "dissononce"; + rev = version; + sha256 = "0hn64qfr0d5npmza6rjyxwwp12k2z2y1ma40zpl104ghac6g3mbs"; + }; + + checkInputs = [ pytest ]; + checkPhase = '' + HOME=$(mktemp -d) py.test tests/ + ''; + + propagatedBuildInputs = [ cryptography transitions ]; + + meta = with lib; { + homepage = "https://pypi.org/project/dissononce/"; + license = licenses.mit; + description = "A python implementation for Noise Protocol Framework"; + }; +} diff --git a/pkgs/development/python-modules/django-mailman3/default.nix b/pkgs/development/python-modules/django-mailman3/default.nix index 5702bb226b4..01ae357677b 100644 --- a/pkgs/development/python-modules/django-mailman3/default.nix +++ b/pkgs/development/python-modules/django-mailman3/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "django-mailman3"; - version = "1.3.0"; + version = "1.3.1"; src = fetchPypi { inherit pname version; - sha256 = "0wppv1q3jkkg2d66qsygc4dfpvhfcj5i2as2xpqnzf3l3w7dgja1"; + sha256 = "b05cf04b2c36916d15b78e24610002206529f1441e2632253a26b2db6bfd3b27"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/django/2_1.nix b/pkgs/development/python-modules/django/2_1.nix index d1ebc686bbd..19e8b0c1a75 100644 --- a/pkgs/development/python-modules/django/2_1.nix +++ b/pkgs/development/python-modules/django/2_1.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "Django"; - version = "2.1.14"; + version = "2.1.15"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "d9159141fc354c4c28cc2b2586d55ba6d5e1531f5470218bb56a75be03d67398"; + sha256 = "a794f7a2f4b7c928eecfbc4ebad03712ff27fb545abe269bf01aa8500781eb1c"; }; patches = stdenv.lib.optionals withGdal [ diff --git a/pkgs/development/python-modules/django_contrib_comments/default.nix b/pkgs/development/python-modules/django_contrib_comments/default.nix index 96c63738eb7..9603929406c 100644 --- a/pkgs/development/python-modules/django_contrib_comments/default.nix +++ b/pkgs/development/python-modules/django_contrib_comments/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "django-contrib-comments"; - version = "1.9.1"; + version = "1.9.2"; src = fetchPypi { inherit pname version; - sha256 = "61b051d7bc3ff593e86b41a1ed5e969423cf55cc92768598af3315e2528e0890"; + sha256 = "d1232bade3094de07dcc205fc833204384e71ba9d30caadcb5bb2882ce8e8d31"; }; propagatedBuildInputs = [ django ]; diff --git a/pkgs/development/python-modules/django_evolution/default.nix b/pkgs/development/python-modules/django_evolution/default.nix index ea02467764d..7d53d458043 100644 --- a/pkgs/development/python-modules/django_evolution/default.nix +++ b/pkgs/development/python-modules/django_evolution/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "A database schema evolution tool for the Django web framework"; - homepage = http://code.google.com/p/django-evolution/; + homepage = "https://github.com/beanbaginc/django-evolution"; license = licenses.bsd0; broken = true; }; diff --git a/pkgs/development/python-modules/django_reversion/default.nix b/pkgs/development/python-modules/django_reversion/default.nix index 69c2f531728..5a4faf5f24e 100644 --- a/pkgs/development/python-modules/django_reversion/default.nix +++ b/pkgs/development/python-modules/django_reversion/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "django-reversion"; - version = "3.0.4"; + version = "3.0.5"; src = fetchPypi { inherit pname version; - sha256 = "ed46722389fb2441860d471c7538967dee545bcee891d3d907b04f4baa98f5fa"; + sha256 = "1add55bb05311f4acd26683dd71af60729d4f33dfe42c608da8e15e679a32009"; }; # tests assume the availability of a mysql/postgresql database diff --git a/pkgs/development/python-modules/docker/default.nix b/pkgs/development/python-modules/docker/default.nix index 2e0dd468325..3d4a73bc969 100644 --- a/pkgs/development/python-modules/docker/default.nix +++ b/pkgs/development/python-modules/docker/default.nix @@ -1,8 +1,9 @@ -{ stdenv, buildPythonPackage, fetchPypi, isPy27 +{ lib, stdenv, buildPythonPackage, fetchPypi, isPy27 , backports_ssl_match_hostname , mock , paramiko , pytest +, pytestCheckHook , requests , six , websocket_client @@ -17,25 +18,25 @@ buildPythonPackage rec { sha256 = "1hdgics03fz2fbhalzys7a7kjj54jnl5a37h6lzdgym41gkwa1kf"; }; + nativeBuildInputs = [ + pytestCheckHook + ] ++ lib.optional isPy27 mock; + propagatedBuildInputs = [ paramiko requests six websocket_client - ] ++ stdenv.lib.optional isPy27 backports_ssl_match_hostname; - - checkInputs = [ - mock - pytest - ]; + ] ++ lib.optional isPy27 backports_ssl_match_hostname; - # Other tests touch network + pytestFlagsArray = [ "tests/unit" ]; # Deselect socket tests on Darwin because it hits the path length limit for a Unix domain socket - checkPhase = '' - ${pytest}/bin/pytest tests/unit/ ${stdenv.lib.optionalString stdenv.isDarwin "--deselect=tests/unit/api_test.py::TCPSocketStreamTest"} - ''; + disabledTests = lib.optionals stdenv.isDarwin [ "stream_response" "socket_file" ]; + + # skip setuptoolsCheckPhase + doCheck = false; - meta = with stdenv.lib; { + meta = with lib; { description = "An API client for docker written in Python"; homepage = "https://github.com/docker/docker-py"; license = licenses.asl20; diff --git a/pkgs/development/python-modules/dpkt/default.nix b/pkgs/development/python-modules/dpkt/default.nix index c8c7f255afa..567cd85fa94 100644 --- a/pkgs/development/python-modules/dpkt/default.nix +++ b/pkgs/development/python-modules/dpkt/default.nix @@ -11,7 +11,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Fast, simple packet creation / parsing, with definitions for the basic TCP/IP protocols"; - homepage = https://code.google.com/p/dpkt/; + homepage = "https://github.com/kbandla/dpkt"; license = licenses.bsd3; maintainers = with maintainers; [ bjornfor ]; platforms = platforms.all; diff --git a/pkgs/development/python-modules/dulwich/default.nix b/pkgs/development/python-modules/dulwich/default.nix index ae6507c4442..785f37144be 100644 --- a/pkgs/development/python-modules/dulwich/default.nix +++ b/pkgs/development/python-modules/dulwich/default.nix @@ -4,12 +4,12 @@ , git, glibcLocales }: buildPythonPackage rec { - version = "0.19.13"; + version = "0.19.14"; pname = "dulwich"; src = fetchPypi { inherit pname version; - sha256 = "aa628449c5f594a9a282f4d9e5993fef65481ef5e3b9b6c52ff31200f8f5dc95"; + sha256 = "d1320232c859ab086fff79eee8fa6ddbcbcbe01ff0c64c9bed48eca470b00b46"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/emcee/default.nix b/pkgs/development/python-modules/emcee/default.nix index dd3d8d39425..ed513579457 100644 --- a/pkgs/development/python-modules/emcee/default.nix +++ b/pkgs/development/python-modules/emcee/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Kick ass affine-invariant ensemble MCMC sampling"; - homepage = http://dan.iel.fm/emcee; + homepage = "https://emcee.readthedocs.io/"; license = licenses.mit; }; } diff --git a/pkgs/development/python-modules/etelemetry/default.nix b/pkgs/development/python-modules/etelemetry/default.nix new file mode 100644 index 00000000000..2323a4dcd57 --- /dev/null +++ b/pkgs/development/python-modules/etelemetry/default.nix @@ -0,0 +1,29 @@ +{ lib, buildPythonPackage, fetchPypi, requests, pytest }: + +buildPythonPackage rec { + version = "0.1.2"; + pname = "etelemetry"; + + src = fetchPypi { + inherit pname version; + sha256 = "0m3dqvs3xbckmjiwppy366qmgzx0z917j1d7dadfl3bprgipy51j"; + }; + + propagatedBuildInputs = [ requests ]; + + # all 2 of the tests both try to pull down from a url + doCheck = false; + + pythonImportsCheck = [ + "etelemetry" + "etelemetry.client" + "etelemetry.config" + ]; + + meta = with lib; { + description = "Lightweight python client to communicate with the etelemetry server"; + homepage = "https://github.com/mgxd/etelemetry-client"; + license = licenses.asl20; + maintainers = with maintainers; [ ]; + }; +} diff --git a/pkgs/development/python-modules/extras/default.nix b/pkgs/development/python-modules/extras/default.nix index adcc43f2650..ff8432ab2d2 100644 --- a/pkgs/development/python-modules/extras/default.nix +++ b/pkgs/development/python-modules/extras/default.nix @@ -16,8 +16,8 @@ buildPythonPackage rec { doCheck = false; meta = { - description = "A module provides basic functions for parsing mime-type names and matching them against a list of media-ranges"; - homepage = https://code.google.com/p/mimeparse/; + description = "Useful extra bits for Python - things that should be in the standard library"; + homepage = "https://github.com/testing-cabal/extras"; license = lib.licenses.mit; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/faker/default.nix b/pkgs/development/python-modules/faker/default.nix index f9155187ca3..8daa637724d 100644 --- a/pkgs/development/python-modules/faker/default.nix +++ b/pkgs/development/python-modules/faker/default.nix @@ -17,11 +17,11 @@ assert pythonOlder "3.3" -> ipaddress != null; buildPythonPackage rec { pname = "Faker"; - version = "2.0.4"; + version = "2.0.5"; src = fetchPypi { inherit pname version; - sha256 = "6327c665c0d8721280b3036d9c9e851c60092bc1f30c8394cc433f8723e2bda5"; + sha256 = "29093e61f12745150774fd05ab499e87252a4fa51ed51e45c40179e854f87925"; }; nativeBuildInputs = [ pytestrunner ]; diff --git a/pkgs/development/python-modules/fastparquet/default.nix b/pkgs/development/python-modules/fastparquet/default.nix index 260d1b7f4b3..046fc530969 100644 --- a/pkgs/development/python-modules/fastparquet/default.nix +++ b/pkgs/development/python-modules/fastparquet/default.nix @@ -1,20 +1,15 @@ -{ lib, buildPythonPackage, fetchPypi, fetchpatch, numba, numpy, pandas, -pytestrunner, thrift, pytest, python-snappy, lz4 }: +{ lib, buildPythonPackage, fetchFromGitHub, numba, numpy, pandas, pytestrunner, +thrift, pytest, python-snappy, lz4 }: buildPythonPackage rec { pname = "fastparquet"; - version = "0.2.1"; + version = "0.3.2"; - src = fetchPypi { - inherit pname version; - sha256 = "183wdmhnhnlsd7908n3d2g4qnb49fcipqfshghwpbdwdzjpa0day"; - }; - - # Fixes for recent pandas version - # See https://github.com/dask/fastparquet/pull/396 - patches = fetchpatch { - url = https://github.com/dask/fastparquet/commit/31fb3115598d1ab62a5c8bf7923a27c16f861529.patch; - sha256 = "0r1ig4rydmy4j85dgb52qbsx6knxdwn4dn9h032fg3p6xqq0zlpm"; + src = fetchFromGitHub { + owner = "dask"; + repo = pname; + rev = version; + sha256 = "142kmyddaq6mvmca23abwns1csn8f3lk9c8mbxwxrg4wa1dh0lb4"; }; postPatch = '' @@ -27,9 +22,6 @@ buildPythonPackage rec { propagatedBuildInputs = [ numba numpy pandas thrift ]; checkInputs = [ pytest python-snappy lz4 ]; - # test_data/ missing in PyPI tarball - doCheck = false; - meta = with lib; { description = "A python implementation of the parquet format"; homepage = https://github.com/dask/fastparquet; diff --git a/pkgs/development/python-modules/feedparser/default.nix b/pkgs/development/python-modules/feedparser/default.nix index ac91fe51d89..c36fd2b1943 100644 --- a/pkgs/development/python-modules/feedparser/default.nix +++ b/pkgs/development/python-modules/feedparser/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = http://code.google.com/p/feedparser/; + homepage = "https://github.com/kurtmckee/feedparser"; description = "Universal feed parser"; license = licenses.bsd2; maintainers = with maintainers; [ domenkozar ]; diff --git a/pkgs/development/python-modules/fiona/default.nix b/pkgs/development/python-modules/fiona/default.nix index 2cd7ad4cf41..abc0853b4c7 100644 --- a/pkgs/development/python-modules/fiona/default.nix +++ b/pkgs/development/python-modules/fiona/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "Fiona"; - version = "1.8.11"; + version = "1.8.13"; src = fetchPypi { inherit pname version; - sha256 = "1e7ca9e051f5bffa1c43c70d573da9ca223fc076b84fa73380614fc02b9eb7f6"; + sha256 = "5ec34898c8b983a723fb4e949dd3e0ed7e691c303e51f6bfd61e52ac9ac813ae"; }; CXXFLAGS = lib.optionalString stdenv.cc.isClang "-std=c++11"; @@ -47,7 +47,7 @@ buildPythonPackage rec { meta = with lib; { description = "OGR's neat, nimble, no-nonsense API for Python"; - homepage = http://toblerity.org/fiona/; + homepage = "https://fiona.readthedocs.io/"; license = licenses.bsd3; maintainers = with maintainers; [ knedlsepp ]; }; diff --git a/pkgs/development/python-modules/flammkuchen/default.nix b/pkgs/development/python-modules/flammkuchen/default.nix new file mode 100644 index 00000000000..3a3d82cd8bb --- /dev/null +++ b/pkgs/development/python-modules/flammkuchen/default.nix @@ -0,0 +1,36 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy27 +, numpy +, scipy +, tables +, pandas +, nose +, configparser +}: + +buildPythonPackage rec { + pname = "flammkuchen"; + version = "0.9.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "e9aab9b229ace70d879b85618a9ce0e88dd6ce35d4dbcdfd60c6b61c33a1b4fb"; + }; + + checkInputs = [ + nose + ]; + + propagatedBuildInputs = [ + numpy + scipy + tables + pandas + ] ++ lib.optionals isPy27 [ configparser ]; + + meta = { + homepage = "https://github.com/portugueslab/flammkuchen"; + description = "Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab"; + license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/flask-elastic/default.nix b/pkgs/development/python-modules/flask-elastic/default.nix index 466bfb44121..9f8e27ea20f 100644 --- a/pkgs/development/python-modules/flask-elastic/default.nix +++ b/pkgs/development/python-modules/flask-elastic/default.nix @@ -17,6 +17,6 @@ buildPythonPackage rec { description = "Integrates official client for Elasticsearch into Flask"; license = licenses.bsd3; maintainers = [ maintainers.mic92 ]; - homepage = https://github.com/cepture/foppch/flask-elastic; + homepage = "https://github.com/marceltschoppch/flask-elastic"; }; } diff --git a/pkgs/development/python-modules/flup/default.nix b/pkgs/development/python-modules/flup/default.nix index 8256f5a1063..a6ef4d421df 100644 --- a/pkgs/development/python-modules/flup/default.nix +++ b/pkgs/development/python-modules/flup/default.nix @@ -15,7 +15,7 @@ buildPythonPackage rec { }; meta = with stdenv.lib; { - homepage = "http://trac.saddi.com/flup"; + homepage = "https://www.saddi.com/software/flup/"; description = "FastCGI Python module set"; license = licenses.bsd0; }; diff --git a/pkgs/development/python-modules/folium/default.nix b/pkgs/development/python-modules/folium/default.nix index c89bfbfd524..967e7cf09c1 100644 --- a/pkgs/development/python-modules/folium/default.nix +++ b/pkgs/development/python-modules/folium/default.nix @@ -14,11 +14,11 @@ buildPythonPackage rec { pname = "folium"; - version = "0.10.0"; + version = "0.10.1"; src = fetchPypi { inherit pname version; - sha256 = "18fzxijsgrb95r0a8anc9ba5ijyw3nlnv3rpavfbkqa5v878x84f"; + sha256 = "0gcc267wxwxr57ry86pqpbiyfvl0g48hfvgy0f2mz9s58g87kgzd"; }; disabled = pythonOlder "3.5"; diff --git a/pkgs/development/python-modules/foxdot/default.nix b/pkgs/development/python-modules/foxdot/default.nix index 0ba46c1832b..ae4e32291c3 100644 --- a/pkgs/development/python-modules/foxdot/default.nix +++ b/pkgs/development/python-modules/foxdot/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "FoxDot"; - version = "0.8.3"; + version = "0.8.4"; src = fetchPypi { inherit pname version; - sha256 = "07ll1rh1bkq1dpb7gxd86jsjhxni73kp9iljiy0d2b86ji8h108p"; + sha256 = "8b6d810f5389692c45d236dec89cecc4ff32ad053e4c878c91363acfa4508639"; }; propagatedBuildInputs = [ tkinter supercollider ]; diff --git a/pkgs/development/python-modules/fpylll/default.nix b/pkgs/development/python-modules/fpylll/default.nix index a27e9494911..7bc4ed82fea 100644 --- a/pkgs/development/python-modules/fpylll/default.nix +++ b/pkgs/development/python-modules/fpylll/default.nix @@ -14,13 +14,13 @@ buildPythonPackage rec { pname = "fpylll"; - version = "0.4.1dev"; + version = "0.5.0dev"; src = fetchFromGitHub { owner = "fplll"; repo = "fpylll"; rev = version; - sha256 = "01x2sqdv0sbjj4g4waj0hj4rcn4bq7h17442xaqwbznym9azmn9w"; + sha256 = "091zqgsqd5cqma1hvimkq5xpr9f1jw80v9m2fr6k9hvssqjzgnab"; }; buildInputs = [ @@ -45,11 +45,16 @@ buildPythonPackage rec { ]; checkPhase = '' - py.test + # Since upstream introduced --doctest-modules in + # https://github.com/fplll/fpylll/commit/9732fdb40cf1bd43ad1f60762ec0a8401743fc79, + # it is necessary to ignore import mismatches. Not sure why, but the files + # should be identical anyway. + PY_IGNORE_IMPORTMISMATCH=1 pytest ''; meta = { description = "A Python interface for fplll"; + changelog = "https://github.com/fplll/fpylll/releases/tag/${version}"; homepage = https://github.com/fplll/fpylll; maintainers = with lib.maintainers; [ timokau ]; license = lib.licenses.gpl2Plus; diff --git a/pkgs/development/python-modules/funcparserlib/default.nix b/pkgs/development/python-modules/funcparserlib/default.nix index 6c3f5f6d018..3a9503419ec 100644 --- a/pkgs/development/python-modules/funcparserlib/default.nix +++ b/pkgs/development/python-modules/funcparserlib/default.nix @@ -23,7 +23,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Recursive descent parsing library based on functional combinators"; - homepage = https://code.google.com/p/funcparserlib/; + homepage = "https://github.com/vlasovskikh/funcparserlib"; license = licenses.mit; platforms = platforms.unix; }; diff --git a/pkgs/development/python-modules/funcy/default.nix b/pkgs/development/python-modules/funcy/default.nix index 0220fd1aeb9..87a3b830bf8 100644 --- a/pkgs/development/python-modules/funcy/default.nix +++ b/pkgs/development/python-modules/funcy/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "funcy"; - version = "1.13"; + version = "1.14"; src = fetchPypi { inherit pname version; - sha256 = "1hxii7g4fn301vr8wg53jc1jkvbjlbaz1fbpgpn4362xcwzk73wi"; + sha256 = "1i55c5kjvkb3y2jqfnlx3iirrd512mxjdhjpm1l2xya6nk1q9vkm"; }; # No tests diff --git a/pkgs/development/python-modules/gateone/default.nix b/pkgs/development/python-modules/gateone/default.nix index f9ad118673a..7a6aa659ace 100644 --- a/pkgs/development/python-modules/gateone/default.nix +++ b/pkgs/development/python-modules/gateone/default.nix @@ -25,7 +25,7 @@ buildPythonPackage { ''; meta = with stdenv.lib; { - homepage = https://liftoffsoftware.com/; + homepage = "http://liftoffsoftware.com/"; description = "GateOne is a web-based terminal emulator and SSH client"; maintainers = with maintainers; [ tomberek ]; license = licenses.gpl3; diff --git a/pkgs/development/python-modules/gcovr/default.nix b/pkgs/development/python-modules/gcovr/default.nix index e6f45a2b4c6..278bd381ca6 100644 --- a/pkgs/development/python-modules/gcovr/default.nix +++ b/pkgs/development/python-modules/gcovr/default.nix @@ -2,19 +2,21 @@ , buildPythonPackage , fetchPypi , jinja2 +, lxml }: buildPythonPackage rec { pname = "gcovr"; - version = "4.1"; + version = "4.2"; src = fetchPypi { inherit pname version; - sha256 = "ca94c337f2d9a70db177ec4330534fad7b2b772beda625c1ec071fbcf1361e22"; + sha256 = "0gyady7x3v3l9fm1zan0idaggqqcm31y7g5vxk7h05p5h7f39bjs"; }; propagatedBuildInputs = [ jinja2 + lxml ]; # There are no unit tests in the pypi tarball. Most of the unit tests on the @@ -22,6 +24,12 @@ buildPythonPackage rec { # See also: https://github.com/gcovr/gcovr/issues/206 doCheck = false; + pythonImportsCheck = [ + "gcovr" + "gcovr.workers" + "gcovr.configuration" + ]; + meta = with stdenv.lib; { description = "A Python script for summarizing gcov data"; license = licenses.bsd0; diff --git a/pkgs/development/python-modules/gdata/default.nix b/pkgs/development/python-modules/gdata/default.nix index dbf2911ce19..182fdc402a6 100644 --- a/pkgs/development/python-modules/gdata/default.nix +++ b/pkgs/development/python-modules/gdata/default.nix @@ -8,7 +8,7 @@ buildPythonPackage rec { version = "2.0.18"; src = fetchurl { - url = "https://gdata-python-client.googlecode.com/files/${pname}-${version}.tar.gz"; + url = "https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/gdata-python-client/${pname}-${version}.tar.gz"; sha256 = "1dpxl5hwyyqd71avpm5vkvw8fhlvf9liizmhrq9jphhrx0nx5rsn"; }; @@ -16,7 +16,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = https://code.google.com/p/gdata-python-client/; + homepage = "https://github.com/google/gdata-python-client"; description = "Python client library for Google data APIs"; license = licenses.asl20; }; diff --git a/pkgs/development/python-modules/geopandas/default.nix b/pkgs/development/python-modules/geopandas/default.nix index 7436626fc74..6ea44bc09a2 100644 --- a/pkgs/development/python-modules/geopandas/default.nix +++ b/pkgs/development/python-modules/geopandas/default.nix @@ -29,7 +29,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Python geospatial data analysis framework"; - homepage = https://geopandas.org; + homepage = "http://geopandas.org"; license = licenses.bsd3; maintainers = with maintainers; [ knedlsepp ]; }; diff --git a/pkgs/development/python-modules/goocalendar/default.nix b/pkgs/development/python-modules/goocalendar/default.nix index 644b68386fe..9fc0acc30af 100644 --- a/pkgs/development/python-modules/goocalendar/default.nix +++ b/pkgs/development/python-modules/goocalendar/default.nix @@ -16,17 +16,22 @@ buildPythonPackage rec { pname = "GooCalendar"; version = "0.6"; - disabled = isPy3k; + disabled = !isPy3k; src = fetchPypi { inherit pname version; sha256 = "4c22c93e19b933d10d8ea1c67a67f485267af82175ef59419427dd39d1e3af18"; }; - nativeBuildInputs = [ pkgconfig gobject-introspection ]; + + nativeBuildInputs = [ + pkgconfig + gobject-introspection + ]; + propagatedBuildInputs = [ - pygtk pygobject3 ]; + buildInputs = [ gtk3 goocanvas2 @@ -37,8 +42,8 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "A calendar widget for GTK using PyGoocanvas."; - homepage = https://goocalendar.tryton.org/; - license = licenses.gpl2; + homepage = https://goocalendar.tryton.org/; + license = licenses.gpl2; maintainers = [ maintainers.udono ]; }; } diff --git a/pkgs/development/python-modules/google_apputils/default.nix b/pkgs/development/python-modules/google_apputils/default.nix index 51b03bf5594..c7b386623ef 100644 --- a/pkgs/development/python-modules/google_apputils/default.nix +++ b/pkgs/development/python-modules/google_apputils/default.nix @@ -32,7 +32,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Google Application Utilities for Python"; - homepage = http://code.google.com/p/google-apputils-python; + homepage = "https://github.com/google/google-apputils"; license = licenses.asl20; }; diff --git a/pkgs/development/python-modules/google_cloud_speech/default.nix b/pkgs/development/python-modules/google_cloud_speech/default.nix index cf2dbe37fff..b14c48cbf08 100644 --- a/pkgs/development/python-modules/google_cloud_speech/default.nix +++ b/pkgs/development/python-modules/google_cloud_speech/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Cloud Speech API enables integration of Google speech recognition into applications."; - homepage = "https://googlecloudplatform.github.io/google-cloud-python/latest/speech/"; + homepage = "https://github.com/googleapis/google-cloud-python/tree/master/speech"; license = licenses.asl20; maintainers = with maintainers; [ vanschelven ]; }; diff --git a/pkgs/development/python-modules/gym/default.nix b/pkgs/development/python-modules/gym/default.nix index d90ded1fb5f..52171470c27 100644 --- a/pkgs/development/python-modules/gym/default.nix +++ b/pkgs/development/python-modules/gym/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "gym"; - version = "0.15.4"; + version = "0.15.3"; src = fetchPypi { inherit pname version; - sha256 = "3b930cbe1c76bbd30455b5e82ba723dea94159a5f988e927f443324bf7cc7ddd"; + sha256 = "18381e13bbd1e2f206a1b88a2af4fb87affd7d06ee7955a6e5e6a79478a9adfc"; }; postPatch = '' diff --git a/pkgs/development/python-modules/gyp/default.nix b/pkgs/development/python-modules/gyp/default.nix index 3cd89a7d0e1..db828eb222d 100644 --- a/pkgs/development/python-modules/gyp/default.nix +++ b/pkgs/development/python-modules/gyp/default.nix @@ -1,6 +1,6 @@ { stdenv , buildPythonPackage -, fetchgit +, fetchFromGitiles , isPy3k }: @@ -9,8 +9,8 @@ buildPythonPackage { version = "2015-06-11"; disabled = isPy3k; - src = fetchgit { - url = "https://chromium.googlesource.com/external/gyp.git"; + src = fetchFromGitiles { + url = "https://chromium.googlesource.com/external/gyp"; rev = "fdc7b812f99e48c00e9a487bd56751bbeae07043"; sha256 = "1imgxsl4mr1662vsj2mlnpvvrbz71yk00w8p85vi5bkgmc6awgiz"; }; diff --git a/pkgs/development/python-modules/hbmqtt/default.nix b/pkgs/development/python-modules/hbmqtt/default.nix index cd3264b78bb..90c6444da4c 100644 --- a/pkgs/development/python-modules/hbmqtt/default.nix +++ b/pkgs/development/python-modules/hbmqtt/default.nix @@ -14,6 +14,11 @@ buildPythonPackage rec { propagatedBuildInputs = [ transitions websockets passlib docopt pyyaml ]; + postPatch = '' + # test tries to bind same port multiple times and fails + rm tests/test_client.py + ''; + checkInputs = [ nose ]; checkPhase = '' diff --git a/pkgs/development/python-modules/hdbscan/default.nix b/pkgs/development/python-modules/hdbscan/default.nix index e716a185a80..7351b274210 100644 --- a/pkgs/development/python-modules/hdbscan/default.nix +++ b/pkgs/development/python-modules/hdbscan/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "hdbscan"; - version = "0.8.23"; + version = "0.8.24"; src = fetchPypi { inherit pname version; - sha256 = "ff60c66591452ceb6bdb7592c560a1ebc7e128a02dd3880e048861f7fea7f78d"; + sha256 = "fe31a7ea0ce2c9babd190a195e491834ff9f64c74daa4ca94fa65a88f701269a"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/holoviews/default.nix b/pkgs/development/python-modules/holoviews/default.nix index 1bc8f10241d..b12ef64c602 100644 --- a/pkgs/development/python-modules/holoviews/default.nix +++ b/pkgs/development/python-modules/holoviews/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "holoviews"; - version = "1.12.6"; + version = "1.12.7"; src = fetchPypi { inherit pname version; - sha256 = "4f6ad184fb6136e5ee37a74b5276825fc3d5fce5033ff3c8db8831ec11ea2e75"; + sha256 = "c63f76d1ce2261eb0cd147a24be25daff399e7df2c3d6ade3e813d2e9cb7d42f"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/homeassistant-pyozw/default.nix b/pkgs/development/python-modules/homeassistant-pyozw/default.nix index 5851d62842b..559aa905c2c 100644 --- a/pkgs/development/python-modules/homeassistant-pyozw/default.nix +++ b/pkgs/development/python-modules/homeassistant-pyozw/default.nix @@ -2,12 +2,12 @@ python_openzwave.overridePythonAttrs (oldAttrs: rec { pname = "homeassistant_pyozw"; - version = "0.1.4"; + version = "0.1.7"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "a4ec26b95dba630df8c95c617c510e4a33db93a6a39e8a97056eec7dc9a49d1e"; + sha256 = "2d500638270ee4f0e7e9e114d9b4402c94c232f314116cdcf88d7c1dc9a44427"; }; meta.homepage = https://github.com/home-assistant/python-openzwave; diff --git a/pkgs/development/python-modules/httplib2/default.nix b/pkgs/development/python-modules/httplib2/default.nix index 0bbaece2c80..77350b09941 100644 --- a/pkgs/development/python-modules/httplib2/default.nix +++ b/pkgs/development/python-modules/httplib2/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { doCheck = false; meta = with lib; { - homepage = http://code.google.com/p/httplib2; + homepage = "https://github.com/httplib2/httplib2"; description = "A comprehensive HTTP client library"; license = licenses.mit; maintainers = with maintainers; [ ]; diff --git a/pkgs/development/python-modules/hvac/default.nix b/pkgs/development/python-modules/hvac/default.nix index ee7321ba626..3b5484dcbcb 100644 --- a/pkgs/development/python-modules/hvac/default.nix +++ b/pkgs/development/python-modules/hvac/default.nix @@ -1,15 +1,15 @@ -{ lib, buildPythonPackage, fetchPypi, requests }: +{ lib, buildPythonPackage, fetchPypi, requests, six }: buildPythonPackage rec { pname = "hvac"; - version = "0.9.5"; + version = "0.9.6"; src = fetchPypi { inherit pname version; - sha256 = "8b98be5868132a591ae5a3ca4b415231d4eac22d3fd77dbd69c3b1081d9ea26d"; + sha256 = "1v37jabp859691863mw8j06hqxsy16ndf804z2k5y5b0d167j9by"; }; - propagatedBuildInputs = [ requests ]; + propagatedBuildInputs = [ requests six ]; # Requires running a Vault server doCheck = false; diff --git a/pkgs/development/python-modules/icalendar/default.nix b/pkgs/development/python-modules/icalendar/default.nix index 48da3da6bc4..1d445f83b08 100644 --- a/pkgs/development/python-modules/icalendar/default.nix +++ b/pkgs/development/python-modules/icalendar/default.nix @@ -7,12 +7,12 @@ }: buildPythonPackage rec { - version = "4.0.3"; + version = "4.0.4"; pname = "icalendar"; src = fetchPypi { inherit pname version; - sha256 = "0mk3dk1dxkcm46jy48v27j2w2349iv4sbimqj1yb5js43mx49hh7"; + sha256 = "16gjvqv0n05jrb9g228pdjgzd3amz2pdhvcgsn1jypszjg5m2w9l"; }; buildInputs = [ setuptools ]; diff --git a/pkgs/development/python-modules/ics/default.nix b/pkgs/development/python-modules/ics/default.nix index 20fb38b187c..b642bdf311e 100644 --- a/pkgs/development/python-modules/ics/default.nix +++ b/pkgs/development/python-modules/ics/default.nix @@ -6,6 +6,7 @@ buildPythonPackage rec { pname = "ics"; version = "0.6"; + disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "C4ptainCrunch"; @@ -15,9 +16,16 @@ buildPythonPackage rec { }; propagatedBuildInputs = [ tatsu arrow ]; - checkInputs = [ pytest-sugar pytestpep8 pytest-flakes pytestcov ]; - disabled = pythonOlder "3.6"; + postPatch = '' + substituteInPlace requirements.txt \ + --replace "arrow>=0.11,<0.15" "arrow" + ''; + + checkInputs = [ pytest-sugar pytestpep8 pytest-flakes pytestcov ]; + checkPhase = '' + pytest + ''; meta = with stdenv.lib; { description = "Pythonic and easy iCalendar library (RFC 5545)"; diff --git a/pkgs/development/python-modules/identify/default.nix b/pkgs/development/python-modules/identify/default.nix index 3b53038321c..e5822349bac 100644 --- a/pkgs/development/python-modules/identify/default.nix +++ b/pkgs/development/python-modules/identify/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "identify"; - version = "1.4.7"; + version = "1.4.8"; src = fetchPypi { inherit pname version; - sha256 = "0vi9qxgnjgxdk4wj3c5ha3hjmc97j3pw1zh2cg39jprapn4rb4fq"; + sha256 = "7782115794ec28b011702815d9f5e532244560cd2bf0789c4f09381d43befd90"; }; # Tests not included in PyPI tarball diff --git a/pkgs/development/python-modules/iniparse/default.nix b/pkgs/development/python-modules/iniparse/default.nix index e0c2fd765c9..1fdae967a42 100644 --- a/pkgs/development/python-modules/iniparse/default.nix +++ b/pkgs/development/python-modules/iniparse/default.nix @@ -22,7 +22,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Accessing and Modifying INI files"; - homepage = http://code.google.com/p/iniparse/; + homepage = "https://github.com/candlepin/python-iniparse"; license = licenses.mit; maintainers = with maintainers; [ danbst ]; }; diff --git a/pkgs/development/python-modules/internetarchive/default.nix b/pkgs/development/python-modules/internetarchive/default.nix index dda0680f537..739a82aecc5 100644 --- a/pkgs/development/python-modules/internetarchive/default.nix +++ b/pkgs/development/python-modules/internetarchive/default.nix @@ -1,6 +1,6 @@ { buildPythonPackage, fetchFromGitHub, pytest, six, clint, pyyaml, docopt , requests, jsonpatch, args, schema, responses, backports_csv, isPy3k -, lib, glibcLocales }: +, lib, glibcLocales, setuptools }: buildPythonPackage rec { pname = "internetarchive"; @@ -23,6 +23,7 @@ buildPythonPackage rec { jsonpatch args schema + setuptools ] ++ lib.optional (!isPy3k) backports_csv; checkInputs = [ pytest responses glibcLocales ]; diff --git a/pkgs/development/python-modules/ipaddr/default.nix b/pkgs/development/python-modules/ipaddr/default.nix index 6aecf5959ff..e76aa6ee2a5 100644 --- a/pkgs/development/python-modules/ipaddr/default.nix +++ b/pkgs/development/python-modules/ipaddr/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Google's IP address manipulation library"; - homepage = http://code.google.com/p/ipaddr-py/; + homepage = "https://github.com/google/ipaddr-py"; license = licenses.asl20; }; diff --git a/pkgs/development/python-modules/ipdb/default.nix b/pkgs/development/python-modules/ipdb/default.nix index 18a2d570497..49b0991f1fd 100644 --- a/pkgs/development/python-modules/ipdb/default.nix +++ b/pkgs/development/python-modules/ipdb/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "ipdb"; - version = "0.12.2"; + version = "0.12.3"; disabled = isPyPy; # setupterm: could not find terminfo database src = fetchPypi { inherit pname version; - sha256 = "0mzfv2sa8qabqzh2vqgwhavb15gsmcgqn6i3jgq6b5q9i9wxsgs7"; + sha256 = "1zbj7xjhkr44grfyv1hb7ff5n1218f9jjabgzica29vh7c74m6jx"; }; propagatedBuildInputs = [ ipython ]; diff --git a/pkgs/development/python-modules/ipython/default.nix b/pkgs/development/python-modules/ipython/default.nix index d0ea0b6ac92..f67c5ea941a 100644 --- a/pkgs/development/python-modules/ipython/default.nix +++ b/pkgs/development/python-modules/ipython/default.nix @@ -22,12 +22,12 @@ buildPythonPackage rec { pname = "ipython"; - version = "7.8.0"; + version = "7.10.1"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "dd76831f065f17bddd7eaa5c781f5ea32de5ef217592cf019e34043b56895aa1"; + sha256 = "03h3m64k8jq0cc48i34g8xq0r68cx3w7wz721mfhr7k06qdv11pi"; }; prePatch = lib.optionalString stdenv.isDarwin '' @@ -57,10 +57,14 @@ buildPythonPackage rec { nosetests ''; - meta = { + pythonImportsCheck = [ + "IPython" + ]; + + meta = with lib; { description = "IPython: Productive Interactive Computing"; homepage = http://ipython.org/; - license = lib.licenses.bsd3; - maintainers = with lib.maintainers; [ bjornfor fridh ]; + license = licenses.bsd3; + maintainers = with maintainers; [ bjornfor fridh ]; }; } diff --git a/pkgs/development/python-modules/jaraco_text/default.nix b/pkgs/development/python-modules/jaraco_text/default.nix index 1d6ce78b685..9b3821edd7a 100644 --- a/pkgs/development/python-modules/jaraco_text/default.nix +++ b/pkgs/development/python-modules/jaraco_text/default.nix @@ -1,15 +1,31 @@ -{ buildPythonPackage, fetchPypi, setuptools_scm +{ lib, buildPythonPackage, fetchPypi, pythonOlder +, importlib-resources , jaraco_functools +, setuptools_scm }: buildPythonPackage rec { pname = "jaraco.text"; - version = "3.1"; + version = "3.2.0"; + src = fetchPypi { inherit pname version; - sha256 = "0c7effed0f269e8bdae3374a7545763e84c1e7f9777cf2dd2d49eef92eb0d7b7"; + sha256 = "1v0hz3h74m31jlbc5bxwkvrx1h2n7887bajrg1n1c3yc4q8qn1z5"; }; + + nativeBuildInputs =[ setuptools_scm ]; + propagatedBuildInputs = [ + jaraco_functools + ] ++ lib.optional (pythonOlder "3.7") [ importlib-resources ]; + + # no tests in pypi package doCheck = false; - buildInputs =[ setuptools_scm ]; - propagatedBuildInputs = [ jaraco_functools ]; + + meta = with lib; { + description = "Module for text manipulation"; + homepage = "https://github.com/jaraco/jaraco.text"; + license = licenses.mit; + maintainers = with maintainers; [ ]; + }; + } diff --git a/pkgs/development/python-modules/jenkins-job-builder/default.nix b/pkgs/development/python-modules/jenkins-job-builder/default.nix index 4cdef182ca7..bc109c560d8 100644 --- a/pkgs/development/python-modules/jenkins-job-builder/default.nix +++ b/pkgs/development/python-modules/jenkins-job-builder/default.nix @@ -28,7 +28,7 @@ buildPythonPackage rec { meta = with lib; { description = "Jenkins Job Builder is a system for configuring Jenkins jobs using simple YAML files stored in Git"; - homepage = "https://docs.openstack.org/infra/system-config/jjb.html"; + homepage = "https://docs.openstack.org/infra/jenkins-job-builder/"; license = licenses.asl20; maintainers = with maintainers; [ ]; }; diff --git a/pkgs/development/python-modules/joblib/default.nix b/pkgs/development/python-modules/joblib/default.nix index 8881dcf5599..d0c875cfa3b 100644 --- a/pkgs/development/python-modules/joblib/default.nix +++ b/pkgs/development/python-modules/joblib/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "joblib"; - version = "0.14.0"; + version = "0.14.1"; src = fetchPypi { inherit pname version; - sha256 = "1zwkl6hgi8wbygcc6ql6yk1if665hwk43sa9shglb2afrfm5gk3g"; + sha256 = "0630eea4f5664c463f23fbf5dcfc54a2bc6168902719fa8e19daf033022786c8"; }; checkInputs = [ sphinx numpydoc pytest ]; @@ -30,7 +30,7 @@ buildPythonPackage rec { meta = { description = "Lightweight pipelining: using Python functions as pipeline jobs"; - homepage = https://pythonhosted.org/joblib/; + homepage = "https://joblib.readthedocs.io/"; license = lib.licenses.bsd3; maintainers = with lib.maintainers; [ costrouc ]; }; diff --git a/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/pkgs/development/python-modules/jsonrpc-websocket/default.nix index 8361e37239e..c0c2fe2a8ee 100644 --- a/pkgs/development/python-modules/jsonrpc-websocket/default.nix +++ b/pkgs/development/python-modules/jsonrpc-websocket/default.nix @@ -1,5 +1,5 @@ { stdenv, buildPythonPackage, fetchPypi -, aiohttp, jsonrpc-base }: +, aiohttp, jsonrpc-base, pep8 }: buildPythonPackage rec { pname = "jsonrpc-websocket"; @@ -10,6 +10,8 @@ buildPythonPackage rec { sha256 = "f1aaca95db795d6a9f7bba52ff83c7fd4139050d0df93ee3a5a448adcfa0c0ac"; }; + nativeBuildInputs = [ pep8 ]; + propagatedBuildInputs = [ aiohttp jsonrpc-base ]; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/junos-eznc/default.nix b/pkgs/development/python-modules/junos-eznc/default.nix index 7255ee53860..77b56e01b0c 100644 --- a/pkgs/development/python-modules/junos-eznc/default.nix +++ b/pkgs/development/python-modules/junos-eznc/default.nix @@ -15,11 +15,11 @@ buildPythonPackage rec { pname = "junos-eznc"; - version = "2.3.0"; + version = "2.3.1"; src = fetchPypi { inherit pname version; - sha256 = "c0f853cdad12256ae8c33a80ff6c31a3ce867c481f805b085d554fbb5b5b084f"; + sha256 = "0f8c4763fe2281979bc00350b93d510368992dbae0dae4fea0bafee5904a7e68"; }; diff --git a/pkgs/development/python-modules/jupyter-repo2docker/default.nix b/pkgs/development/python-modules/jupyter-repo2docker/default.nix index 0ee4ea17bc7..44c0a3514f5 100644 --- a/pkgs/development/python-modules/jupyter-repo2docker/default.nix +++ b/pkgs/development/python-modules/jupyter-repo2docker/default.nix @@ -1,18 +1,14 @@ -{ stdenv -, buildPythonPackage -, fetchPypi -, pkgs-docker +{ stdenv, buildPythonPackage, fetchPypi, pythonAtLeast , docker -, traitlets -, python-json-logger , escapism , jinja2 -, ruamel_yaml +, pkgs-docker +, python-json-logger , pyyaml -, pytest -, wheel -, pytestcov -, pythonAtLeast +, ruamel_yaml +, semver +, toml +, traitlets }: buildPythonPackage rec { @@ -25,12 +21,28 @@ buildPythonPackage rec { sha256 = "7965262913be6be60e64c8016f5f3d4bf93701f2787209215859d73b2adbc05a"; }; - checkInputs = [ pytest pyyaml wheel pytestcov ]; - propagatedBuildInputs = [ pkgs-docker docker traitlets python-json-logger escapism jinja2 ruamel_yaml ]; + propagatedBuildInputs = [ + docker + escapism + jinja2 + pkgs-docker + python-json-logger + ruamel_yaml + semver + toml + traitlets + ]; # tests not packaged with pypi release doCheck = false; + pythonImportsCheck = [ + "repo2docker" + "repo2docker.app" + "repo2docker.utils" + "repo2docker.contentproviders.base" + ]; + meta = with stdenv.lib; { homepage = https://repo2docker.readthedocs.io/en/latest/; description = "Repo2docker: Turn code repositories into Jupyter enabled Docker Images"; diff --git a/pkgs/development/python-modules/kajiki/default.nix b/pkgs/development/python-modules/kajiki/default.nix index b1b82f31d76..8643e562fa0 100644 --- a/pkgs/development/python-modules/kajiki/default.nix +++ b/pkgs/development/python-modules/kajiki/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "Kajiki"; - version = "0.8.1"; + version = "0.8.2"; src = fetchPypi { inherit pname version; - sha256 = "85202ff7c2ce2466e9da82f06b25d1d6753d411d0e1b3ab3b145ed1e04c46782"; + sha256 = "bbec46b19285d42769d7c4f5a8a0195b72a62b54cd360a26a8875319d58efef6"; }; propagatedBuildInputs = [ Babel pytz nine ]; diff --git a/pkgs/development/python-modules/kombu/default.nix b/pkgs/development/python-modules/kombu/default.nix index 323ab341ec6..5caab5a377e 100644 --- a/pkgs/development/python-modules/kombu/default.nix +++ b/pkgs/development/python-modules/kombu/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "kombu"; - version = "4.6.6"; + version = "4.6.7"; src = fetchPypi { inherit pname version; - sha256 = "1760b54b1d15a547c9a26d3598a1c8cdaf2436386ac1f5561934bc8a3cbbbd86"; + sha256 = "67b32ccb6fea030f8799f8fd50dd08e03a4b99464ebc4952d71d8747b1a52ad1"; }; postPatch = '' diff --git a/pkgs/development/python-modules/libarcus/default.nix b/pkgs/development/python-modules/libarcus/default.nix index 495fb42c302..97fd448f183 100644 --- a/pkgs/development/python-modules/libarcus/default.nix +++ b/pkgs/development/python-modules/libarcus/default.nix @@ -3,14 +3,14 @@ buildPythonPackage rec { pname = "libarcus"; - version = "4.3.0"; + version = "4.4.0"; format = "other"; src = fetchFromGitHub { owner = "Ultimaker"; repo = "libArcus"; rev = version; - sha256 = "1x06daijxbrqj0dlxmi2zn7ap74zf6hih3krmkwhvarm2nr052g4"; + sha256 = "16m7m6ak5fqw3djn4azwiamkizcc1dv7brv11kv99n3b43zzgn6d"; }; disabled = pythonOlder "3.4.0"; @@ -20,7 +20,7 @@ buildPythonPackage rec { buildInputs = [ protobuf ]; postPatch = '' - sed -i 's#''${Python3_SITELIB}#${placeholder "out"}/${python.sitePackages}#' cmake/SIPMacros.cmake + sed -i 's#''${Python3_SITEARCH}#${placeholder "out"}/${python.sitePackages}#' cmake/SIPMacros.cmake ''; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/libsavitar/default.nix b/pkgs/development/python-modules/libsavitar/default.nix index 7ec89c569dd..b43468bdf9c 100644 --- a/pkgs/development/python-modules/libsavitar/default.nix +++ b/pkgs/development/python-modules/libsavitar/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "libsavitar"; - version = "4.3.0"; + version = "4.4.0"; format = "other"; src = fetchFromGitHub { diff --git a/pkgs/development/python-modules/libsexy/default.nix b/pkgs/development/python-modules/libsexy/default.nix deleted file mode 100644 index 78e0dae2634..00000000000 --- a/pkgs/development/python-modules/libsexy/default.nix +++ /dev/null @@ -1,27 +0,0 @@ -{ stdenv, fetchurl, buildPythonPackage, libsexy, pkgconfig, libxml2, pygtk, pango, glib, python }: - -buildPythonPackage rec { - pname = "libsexy"; - version = "0.1.9"; - format = "other"; - - src = fetchurl { - url = "http://releases.chipx86.com/libsexy/sexy-python/sexy-python-${version}.tar.gz"; - sha256 = "05bgcsxwkp63rlr8wg6znd46cfbhrzc5wh70jabsi654pxxjb39d"; - }; - - nativeBuildInputs = [ pkgconfig pygtk ]; - - propagatedBuildInputs = [ - pygtk libsexy glib pango libxml2 - ]; - - postInstall = '' - ln -s $out/${python.sitePackages}/gtk-2.0/* $out/${python.sitePackages} - ''; - - meta = { - description = "Python libsexy bindings"; - platforms = stdenv.lib.platforms.linux; - }; -} diff --git a/pkgs/development/python-modules/lightgbm/default.nix b/pkgs/development/python-modules/lightgbm/default.nix index 2b9843e303d..0a711b31d1a 100644 --- a/pkgs/development/python-modules/lightgbm/default.nix +++ b/pkgs/development/python-modules/lightgbm/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "lightgbm"; - version = "2.3.0"; + version = "2.3.1"; src = fetchPypi { inherit pname version; - sha256 = "37225b9f816ea3365ff5988fc8a3717e46ac99a5f223986c86c86cec4f111b54"; + sha256 = "bd1817be401e74c0d8b049e97ea2f35d2ce155cfa130119ce4195ea207bd6388"; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/lightparam/default.nix b/pkgs/development/python-modules/lightparam/default.nix new file mode 100644 index 00000000000..6681b528b8c --- /dev/null +++ b/pkgs/development/python-modules/lightparam/default.nix @@ -0,0 +1,28 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k +, numpy +}: + +buildPythonPackage rec { + pname = "lightparam"; + version = "0.3.7"; + disabled = !isPy3k; + format = "wheel"; + + src = fetchPypi { + inherit pname version; + format = "wheel"; + python = "py3"; + sha256 = "53d5d5b225bac27bc14929c9ad4e51ece4f692813dd367f317fb1586145d93f1"; + }; + + propagatedBuildInputs = [ + numpy + ]; + + meta = { + homepage = "https://github.com/portugueslab/lightparam"; + description = "Another attempt at parameters in Python"; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/limnoria/default.nix b/pkgs/development/python-modules/limnoria/default.nix index 24dd7e91abc..9bcc95ddc30 100644 --- a/pkgs/development/python-modules/limnoria/default.nix +++ b/pkgs/development/python-modules/limnoria/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "limnoria"; - version = "2019.09.08"; + version = "2019.11.09"; src = fetchPypi { inherit pname version; - sha256 = "0l50smy3hai6pb6lwvcgzrx6yfzshqlvx8ym5my1ji07ilnasmmp"; + sha256 = "1ni25jmri0928jj2c24xw5f2fzljjla54zh80fimks1aa5752j29"; }; patchPhase = '' @@ -22,7 +22,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "A modified version of Supybot, an IRC bot"; - homepage = http://supybot.fr.cr; + homepage = "https://github.com/ProgVal/Limnoria"; license = licenses.bsd3; maintainers = with maintainers; [ goibhniu ]; }; diff --git a/pkgs/development/python-modules/logutils/default.nix b/pkgs/development/python-modules/logutils/default.nix index ce48978d677..8b4cb4e69c5 100644 --- a/pkgs/development/python-modules/logutils/default.nix +++ b/pkgs/development/python-modules/logutils/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Logging utilities"; - homepage = http://code.google.com/p/logutils/; + homepage = "https://bitbucket.org/vinay.sajip/logutils/"; license = licenses.bsd0; }; diff --git a/pkgs/development/python-modules/lxml/default.nix b/pkgs/development/python-modules/lxml/default.nix index f2cc1663041..db3bf692556 100644 --- a/pkgs/development/python-modules/lxml/default.nix +++ b/pkgs/development/python-modules/lxml/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "lxml"; - version = "4.4.1"; + version = "4.4.2"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "${pname}-${version}"; - sha256 = "1hkl3bhbwiwwfb57nq9lr24rkp782ymfvqrdf9x1wifc79ivlbxw"; + sha256 = "0h4axgcghshcvh1nn39l64xxhylglm3b00hh2rbi1ifvly5mx24f"; }; # setuptoolsBuildPhase needs dependencies to be passed through nativeBuildInputs diff --git a/pkgs/development/python-modules/mapbox/default.nix b/pkgs/development/python-modules/mapbox/default.nix new file mode 100644 index 00000000000..1eec58919d5 --- /dev/null +++ b/pkgs/development/python-modules/mapbox/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, boto3 +, cachecontrol +, fetchFromGitHub +, iso3166 +, python-dateutil +, requests +, responses +, polyline +, pytestCheckHook +, uritemplate +}: + +buildPythonPackage rec { + pname = "mapbox"; + version = "0.18.0"; + + src = fetchFromGitHub { + owner = "mapbox"; + repo = "mapbox-sdk-py"; + rev = "0.18.0"; + sha256 = "123wsa4j11ps5pkjgylbmw4gnzh2vi22swgmvy50w26glkszh075"; + }; + + propagatedBuildInputs = [ boto3 cachecontrol iso3166 python-dateutil requests polyline uritemplate ]; + checkInputs = [ pytestCheckHook responses ]; + + meta = with lib; { + homepage = https://github.com/mapbox/mapbox-sdk-py; + license = licenses.mit; + description = "Mapbox SDK for Python"; + longDescription = "Low-level client API for Mapbox web services."; + maintainers = with maintainers; [ ersin ]; + }; +} diff --git a/pkgs/development/python-modules/marionette-harness/mozdevice.nix b/pkgs/development/python-modules/marionette-harness/mozdevice.nix index 19ec1ddb5c5..21bbf12868c 100644 --- a/pkgs/development/python-modules/marionette-harness/mozdevice.nix +++ b/pkgs/development/python-modules/marionette-harness/mozdevice.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "mozdevice"; - version = "3.0.5"; + version = "3.0.6"; format = "wheel"; src = fetchPypi { inherit pname version; - sha256 = "1gpz0y81407pk71p9yzf15kqqk10fcansw8a607488d11m1jn3yf"; + sha256 = "4cbeb4558f952cb08f53c4b57a405981b5683f38df0b293f0e7d20b6f4c17d84"; format = "wheel"; }; diff --git a/pkgs/development/python-modules/matplotlib/2.nix b/pkgs/development/python-modules/matplotlib/2.nix index 5a45b02a240..8ea530489e2 100644 --- a/pkgs/development/python-modules/matplotlib/2.nix +++ b/pkgs/development/python-modules/matplotlib/2.nix @@ -1,9 +1,8 @@ { stdenv, fetchPypi, python, buildPythonPackage, pycairo, backports_functools_lru_cache , which, cycler, dateutil, nose, numpy, pyparsing, sphinx, tornado, kiwisolver -, freetype, libpng, pkgconfig, mock, pytz, pygobject3, functools32, subprocess32 +, freetype, libpng, pkgconfig, mock, pytz, pygobject3, gobject-introspection, functools32, subprocess32 , fetchpatch , enableGhostscript ? false, ghostscript ? null, gtk3 -, enableGtk2 ? false, pygtk ? null, gobject-introspection , enableGtk3 ? false, cairo # darwin has its own "MacOSX" backend , enableTk ? !stdenv.isDarwin, tcl ? null, tk ? null, tkinter ? null, libX11 ? null @@ -14,7 +13,6 @@ }: assert enableGhostscript -> ghostscript != null; -assert enableGtk2 -> pygtk != null; assert enableTk -> (tcl != null) && (tk != null) && (tkinter != null) @@ -45,7 +43,6 @@ buildPythonPackage rec { [ cycler dateutil nose numpy pyparsing tornado freetype kiwisolver libpng mock pytz ] ++ stdenv.lib.optional (pythonOlder "3.3") backports_functools_lru_cache - ++ stdenv.lib.optional enableGtk2 pygtk ++ stdenv.lib.optionals enableGtk3 [ cairo pycairo gtk3 gobject-introspection pygobject3 ] ++ stdenv.lib.optionals enableTk [ tcl tk tkinter libX11 ] ++ stdenv.lib.optionals enableQt [ pyqt4 ] diff --git a/pkgs/development/python-modules/matplotlib/default.nix b/pkgs/development/python-modules/matplotlib/default.nix index ab03149e72d..44d2bf67247 100644 --- a/pkgs/development/python-modules/matplotlib/default.nix +++ b/pkgs/development/python-modules/matplotlib/default.nix @@ -1,8 +1,7 @@ { stdenv, fetchPypi, python, buildPythonPackage, isPy3k, pycairo, backports_functools_lru_cache , which, cycler, dateutil, nose, numpy, pyparsing, sphinx, tornado, kiwisolver -, freetype, libpng, pkgconfig, mock, pytz, pygobject3 +, freetype, libpng, pkgconfig, mock, pytz, pygobject3, gobject-introspection , enableGhostscript ? true, ghostscript ? null, gtk3 -, enableGtk2 ? false, pygtk ? null, gobject-introspection , enableGtk3 ? false, cairo # darwin has its own "MacOSX" backend , enableTk ? !stdenv.isDarwin, tcl ? null, tk ? null, tkinter ? null, libX11 ? null @@ -13,7 +12,6 @@ }: assert enableGhostscript -> ghostscript != null; -assert enableGtk2 -> pygtk != null; assert enableTk -> (tcl != null) && (tk != null) && (tkinter != null) @@ -22,14 +20,14 @@ assert enableTk -> (tcl != null) assert enableQt -> pyqt5 != null; buildPythonPackage rec { - version = "3.1.1"; + version = "3.1.2"; pname = "matplotlib"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1febd22afe1489b13c6749ea059d392c03261b2950d1d45c17e3aed812080c93"; + sha256 = "8e8e2c2fe3d873108735c6ee9884e6f36f467df4a143136209cff303b183bada"; }; NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isDarwin "-I${libcxx}/include/c++/v1"; @@ -46,7 +44,6 @@ buildPythonPackage rec { [ cycler dateutil nose numpy pyparsing tornado freetype kiwisolver libpng mock pytz ] ++ stdenv.lib.optional (pythonOlder "3.3") backports_functools_lru_cache - ++ stdenv.lib.optional enableGtk2 pygtk ++ stdenv.lib.optionals enableGtk3 [ cairo pycairo gtk3 gobject-introspection pygobject3 ] ++ stdenv.lib.optionals enableTk [ tcl tk tkinter libX11 ] ++ stdenv.lib.optionals enableQt [ pyqt5 ]; diff --git a/pkgs/development/python-modules/mesa/default.nix b/pkgs/development/python-modules/mesa/default.nix index cab480f84fd..f8fc43808fb 100644 --- a/pkgs/development/python-modules/mesa/default.nix +++ b/pkgs/development/python-modules/mesa/default.nix @@ -4,7 +4,8 @@ buildPythonPackage rec { pname = "mesa"; - version = "0.8.6"; + # contains several fixes for networkx 2.4 bump + version = "unstable-2019-12-09"; # According to their docs, this library is for Python 3+. disabled = isPy27; @@ -12,8 +13,8 @@ buildPythonPackage rec { src = fetchFromGitHub { owner = "projectmesa"; repo = "mesa"; - rev = "v${version}"; - sha256 = "0d8c636zhswxd91ldlmdxxlyym2fj3bk1iqmpc1jp3hg7vvc7w03"; + rev = "86b343b42630e94d939029ff2cc609ff04ed40e9"; + sha256 = "1y41s1vd89vcsm4aia18ayfff4w2af98lwn5l9fcwp157li985vw"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/mox/default.nix b/pkgs/development/python-modules/mox/default.nix index d9b5a5aa111..3537d936bb6 100644 --- a/pkgs/development/python-modules/mox/default.nix +++ b/pkgs/development/python-modules/mox/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = http://code.google.com/p/pymox/; + homepage = "https://pymox.readthedocs.io/"; description = "A mock object framework for Python"; license = licenses.asl20; }; diff --git a/pkgs/development/python-modules/mpi4py/default.nix b/pkgs/development/python-modules/mpi4py/default.nix index 8cd639e520c..c16c4719a34 100644 --- a/pkgs/development/python-modules/mpi4py/default.nix +++ b/pkgs/development/python-modules/mpi4py/default.nix @@ -46,7 +46,7 @@ buildPythonPackage rec { meta = { description = "Python bindings for the Message Passing Interface standard"; - homepage = http://code.google.com/p/mpi4py/; + homepage = "https://bitbucket.org/mpi4py/mpi4py/"; license = stdenv.lib.licenses.bsd3; }; } diff --git a/pkgs/development/python-modules/mpmath/default.nix b/pkgs/development/python-modules/mpmath/default.nix index 9da56cad881..1cbb8b04130 100644 --- a/pkgs/development/python-modules/mpmath/default.nix +++ b/pkgs/development/python-modules/mpmath/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = http://mpmath.googlecode.com; + homepage = "http://mpmath.org/"; description = "A pure-Python library for multiprecision floating arithmetic"; license = licenses.bsd3; maintainers = with maintainers; [ lovek323 ]; diff --git a/pkgs/development/python-modules/mps-youtube/default.nix b/pkgs/development/python-modules/mps-youtube/default.nix index 39ad7c47215..753a0d24d0a 100644 --- a/pkgs/development/python-modules/mps-youtube/default.nix +++ b/pkgs/development/python-modules/mps-youtube/default.nix @@ -28,7 +28,7 @@ buildPythonPackage rec { meta = with lib; { description = "Terminal based YouTube player and downloader"; - homepage = https://github.com/np1/mps-youtube; + homepage = "https://github.com/mps-youtube/mps-youtube"; license = licenses.gpl3; maintainers = with maintainers; [ odi ]; }; diff --git a/pkgs/development/python-modules/musicbrainzngs/default.nix b/pkgs/development/python-modules/musicbrainzngs/default.nix index 0f18163883e..71bdcc8b547 100644 --- a/pkgs/development/python-modules/musicbrainzngs/default.nix +++ b/pkgs/development/python-modules/musicbrainzngs/default.nix @@ -23,7 +23,7 @@ buildPythonPackage rec { ''; meta = with stdenv.lib; { - homepage = http://alastair/python-musicbrainz-ngs; + homepage = "https://python-musicbrainzngs.readthedocs.org/"; description = "Python bindings for musicbrainz NGS webservice"; license = licenses.bsd2; maintainers = with maintainers; [ domenkozar ]; diff --git a/pkgs/development/python-modules/mypy/default.nix b/pkgs/development/python-modules/mypy/default.nix index 6c64580b2cf..b2731f5bb62 100644 --- a/pkgs/development/python-modules/mypy/default.nix +++ b/pkgs/development/python-modules/mypy/default.nix @@ -5,20 +5,27 @@ buildPythonPackage rec { pname = "mypy"; - version = "0.740"; - - # Tests not included in pip package. - doCheck = false; + version = "0.750"; + disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "48c8bc99380575deb39f5d3400ebb6a8a1cb5cc669bbba4d3bb30f904e0a0e7d"; + sha256 = "0k0l74g3jcq7ppzn234sffsaacn6qaq242famckk0cviwgld1jvf"; }; - disabled = !isPy3k; - propagatedBuildInputs = [ typed-ast psutil mypy-extensions typing-extensions ]; + # Tests not included in pip package. + doCheck = false; + + pythonImportsCheck = [ + "mypy" + "mypy.types" + "mypy.api" + "mypy.fastparse" + "mypy.report" + ]; + meta = with stdenv.lib; { description = "Optional static typing for Python"; homepage = "http://www.mypy-lang.org"; diff --git a/pkgs/development/python-modules/mysqlclient/default.nix b/pkgs/development/python-modules/mysqlclient/default.nix index b2af7bded1c..72bf06893ed 100644 --- a/pkgs/development/python-modules/mysqlclient/default.nix +++ b/pkgs/development/python-modules/mysqlclient/default.nix @@ -2,7 +2,7 @@ buildPythonPackage rec { pname = "mysqlclient"; - version = "1.4.5"; + version = "1.4.6"; nativeBuildInputs = [ libmysqlclient @@ -17,7 +17,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "e80109b0ae8d952b900b31b623181532e5e89376d707dcbeb63f99e69cefe559"; + sha256 = "f3fdaa9a38752a3b214a6fe79d7cae3653731a53e577821f9187e67cbecb2e16"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/namebench/default.nix b/pkgs/development/python-modules/namebench/default.nix index a930f250d80..44b590bae2c 100644 --- a/pkgs/development/python-modules/namebench/default.nix +++ b/pkgs/development/python-modules/namebench/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { disabled = isPy3k || isPyPy; src = fetchurl { - url = "http://namebench.googlecode.com/files/${pname}-${version}-source.tgz"; + url = "https://storage.googleapis.com/google-code-archive-downloads/v2/code.google.com/{pname}/${pname}-${version}-source.tgz"; sha256 = "09clbcd6wxgk4r6qw7hb78h818mvca7lijigy1mlq5y1f3lgkk1h"; }; @@ -28,15 +28,14 @@ buildPythonPackage rec { ''; meta = with stdenv.lib; { - homepage = http://namebench.googlecode.com/; + homepage = "https://github.com/google/namebench"; # Formerly https://code.google.com/archive/p/namebench/ description = "Find fastest DNS servers available"; license = with licenses; [ asl20 # third-party program licenses (embedded in the sources) - "LGPL" # Crystal_Clear - free # dns - asl20 # graphy - "BSD" # jinja2 + lgpl21 # Crystal_Clear + isc # dns + bsd3 # jinja2 ]; longDescription = '' It hunts down the fastest DNS servers available for your computer to diff --git a/pkgs/development/python-modules/nbdime/default.nix b/pkgs/development/python-modules/nbdime/default.nix index 5bff17ee895..f641c017384 100644 --- a/pkgs/development/python-modules/nbdime/default.nix +++ b/pkgs/development/python-modules/nbdime/default.nix @@ -24,12 +24,12 @@ buildPythonPackage rec { pname = "nbdime"; - version = "1.0.7"; + version = "1.1.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "28615cb92d59e0511026bac4c916f16dc15981bcad4ddc3f7fdd6a289ea01242"; + sha256 = "0qfy7nmlg75vryvrlgd6p0rqrvcclq8n9kd0n4xv5959s9sjy0w0"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/ncclient/default.nix b/pkgs/development/python-modules/ncclient/default.nix index 02e2a1b472a..58d88e8dbf8 100644 --- a/pkgs/development/python-modules/ncclient/default.nix +++ b/pkgs/development/python-modules/ncclient/default.nix @@ -31,7 +31,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = http://ncclient.org/; + homepage = "https://github.com/ncclient/ncclient"; description = "Python library for NETCONF clients"; license = licenses.asl20; maintainers = with maintainers; [ xnaveira ]; diff --git a/pkgs/development/python-modules/nest-asyncio/default.nix b/pkgs/development/python-modules/nest-asyncio/default.nix index 3dec538c6d3..a88c07c9968 100644 --- a/pkgs/development/python-modules/nest-asyncio/default.nix +++ b/pkgs/development/python-modules/nest-asyncio/default.nix @@ -5,13 +5,13 @@ }: buildPythonPackage rec { - version = "1.2.0"; + version = "1.2.1"; pname = "nest_asyncio"; disabled = !(pythonAtLeast "3.5"); src = fetchPypi { inherit pname version; - sha256 = "f5b22dd23ee6195cea509c344d9ec34274f45bff078d8f18e9dc322dc74c6008"; + sha256 = "7d4d7c1ca2aad0e5c2706d0222c8ff006805abfd05caa97e6127c8811d0f6adc"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/nidaqmx/default.nix b/pkgs/development/python-modules/nidaqmx/default.nix new file mode 100644 index 00000000000..937e6c1c91b --- /dev/null +++ b/pkgs/development/python-modules/nidaqmx/default.nix @@ -0,0 +1,55 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, six +, numpy +, pytestCheckHook +, pykka +, enum34 +, pythonOlder +}: + +# Note we currently do not patch the path to the drivers +# because those are not available in Nixpkgs. +# https://github.com/NixOS/nixpkgs/pull/74980 + +buildPythonPackage rec { + pname = "nidaqmx"; + version = src.rev; + + src = fetchFromGitHub { + owner = "ni"; + repo = "nidaqmx-python"; + rev = "0.5.7"; + sha256 = "19m9p99qvdmvvqbwmqrqm6b50x7czgrj07gdsxbbgw04shf5bhrs"; + }; + + propagatedBuildInputs = [ + numpy + six + ] ++ lib.optionals (pythonOlder "3.4") [ + enum34 + ]; + + checkInputs = [ + pytestCheckHook + pykka + ]; + + dontUseSetuptoolsCheck = true; + + # Older pytest is needed + # https://github.com/ni/nidaqmx-python/issues/80 + # Fixture "x_series_device" called directly. Fixtures are not meant to be called directly + doCheck = false; + + pythonCheckImports = [ + "nidaqmx.task" + ]; + + meta = { + description = "API for interacting with the NI-DAQmx driver"; + license = [ lib.licenses.mit ]; + maintainers = [ lib.maintainers.fridh ]; + }; +} diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix index 4d80a0638c7..13c35999cf9 100644 --- a/pkgs/development/python-modules/nipype/default.nix +++ b/pkgs/development/python-modules/nipype/default.nix @@ -6,6 +6,8 @@ , click , configparser ? null , dateutil +, etelemetry +, filelock , funcsigs , future , futures @@ -14,6 +16,7 @@ , nibabel , numpy , packaging +, pathlib2 , prov , psutil , pybids @@ -60,6 +63,8 @@ buildPythonPackage rec { propagatedBuildInputs = [ click dateutil + etelemetry + filelock funcsigs future networkx @@ -77,6 +82,7 @@ buildPythonPackage rec { ] ++ stdenv.lib.optional (!isPy3k) [ configparser futures + pathlib2 # darwin doesn't receive this transitively, but it is in install_requires ]; checkInputs = [ @@ -91,6 +97,8 @@ buildPythonPackage rec { which ]; + # checks on darwin inspect memory which doesn't work in build environment + doCheck = !stdenv.isDarwin; # ignore tests which incorrect fail to detect xvfb checkPhase = '' LC_ALL="en_US.UTF-8" pytest -v nipype -k 'not display' diff --git a/pkgs/development/python-modules/nipype/neurdflib.nix b/pkgs/development/python-modules/nipype/neurdflib.nix index 3042f715687..33526bebd55 100644 --- a/pkgs/development/python-modules/nipype/neurdflib.nix +++ b/pkgs/development/python-modules/nipype/neurdflib.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "neurdflib"; - version = "5.0.0.post1"; + version = "5.0.1"; src = fetchPypi { inherit pname version; - sha256 = "1qgmprixqxycxpjk9wjdmjykma14qqa2wcbx4nsldxi0ga7i7vv5"; + sha256 = "d34493cee15029ff5db16157429585ff863ba5542675a4d8a94a0da1bc6e3a50"; }; propagatedBuildInputs = [ isodate html5lib SPARQLWrapper ]; diff --git a/pkgs/development/python-modules/numericalunits/default.nix b/pkgs/development/python-modules/numericalunits/default.nix index 41b4c1a8f31..3f041ef698e 100644 --- a/pkgs/development/python-modules/numericalunits/default.nix +++ b/pkgs/development/python-modules/numericalunits/default.nix @@ -1,19 +1,19 @@ { stdenv , buildPythonPackage , fetchPypi +, isPy3k }: buildPythonPackage rec { - version = "1.23"; + version = "1.24"; pname = "numericalunits"; src = fetchPypi { inherit pname version; - sha256 = "1q1jrzxx0k7j82c5q061hd10mp965ra8813vb09ji326fbxzn2gy"; + sha256 = "0wn7kqp0rxqr6gnqhdn8pc0wy359krzan0kbika6hfvb0c1rw1hs"; }; - # no tests - doCheck = false; + disabled = !isPy3k; meta = with stdenv.lib; { homepage = http://pypi.python.org/pypi/numericalunits; diff --git a/pkgs/development/python-modules/numpy/default.nix b/pkgs/development/python-modules/numpy/default.nix index fdc5e9b8f13..61f85773949 100644 --- a/pkgs/development/python-modules/numpy/default.nix +++ b/pkgs/development/python-modules/numpy/default.nix @@ -66,7 +66,7 @@ in buildPythonPackage rec { meta = { description = "Scientific tools for Python"; - homepage = http://numpy.scipy.org/; + homepage = https://numpy.org/; maintainers = with lib.maintainers; [ fridh ]; }; } diff --git a/pkgs/development/python-modules/oauth/default.nix b/pkgs/development/python-modules/oauth/default.nix index a8e5c8bf53d..f4a8e3a62c2 100644 --- a/pkgs/development/python-modules/oauth/default.nix +++ b/pkgs/development/python-modules/oauth/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { doCheck = false; meta = with stdenv.lib; { - homepage = http://code.google.com/p/oauth; + homepage = https://code.google.com/archive/p/oauth/; description = "Library for OAuth version 1.0a"; license = licenses.mit; }; diff --git a/pkgs/development/python-modules/odo/default.nix b/pkgs/development/python-modules/odo/default.nix index 6e82119faa5..6c19bf0a0fd 100644 --- a/pkgs/development/python-modules/odo/default.nix +++ b/pkgs/development/python-modules/odo/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { pname = "odo"; - version= "unstable-2019-07-16"; + version= "unstable-2018-09-21"; src = fetchFromGitHub { owner = "blaze"; @@ -54,5 +54,6 @@ buildPythonPackage rec { description = "Data migration utilities"; license = licenses.bsdOriginal; maintainers = with maintainers; [ fridh costrouc ]; + broken = true; # no longer compatible with dask>=2.0 }; } diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix index bd0a7a5b2be..a3f74f00093 100644 --- a/pkgs/development/python-modules/openpyxl/default.nix +++ b/pkgs/development/python-modules/openpyxl/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "openpyxl"; - version = "3.0.1"; + version = "3.0.2"; disabled = isPy27; # 2.6.4 was final python2 release src = fetchPypi { inherit pname version; - sha256 = "a3ee361d3ff04af6048d594775b3a54ffdf215d40fa5c6c78b2a41c0d0b020d3"; + sha256 = "eb68c08a72ac6d9812df181e88ebece3a68436364353eb6eda3bed863e3d73a6"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/opt-einsum/2.nix b/pkgs/development/python-modules/opt-einsum/2.nix index 11da1ba1ea5..41c4df89f4f 100644 --- a/pkgs/development/python-modules/opt-einsum/2.nix +++ b/pkgs/development/python-modules/opt-einsum/2.nix @@ -23,7 +23,7 @@ buildPythonPackage rec { meta = { description = "Optimizing NumPy's einsum function with order optimization and GPU support."; - homepage = http://optimized-einsum.readthedocs.io; + homepage = "https://optimized-einsum.readthedocs.io"; license = lib.licenses.mit; maintainers = with lib.maintainers; [ teh ]; }; diff --git a/pkgs/development/python-modules/opt-einsum/default.nix b/pkgs/development/python-modules/opt-einsum/default.nix index 064c0adb134..1d8c9d9531a 100644 --- a/pkgs/development/python-modules/opt-einsum/default.nix +++ b/pkgs/development/python-modules/opt-einsum/default.nix @@ -19,7 +19,7 @@ buildPythonPackage rec { meta = with lib; { description = "Optimizing NumPy's einsum function with order optimization and GPU support."; - homepage = http://optimized-einsum.readthedocs.io; + homepage = https://github.com/dgasmith/opt_einsum; license = licenses.mit; maintainers = with maintainers; [ teh ]; }; diff --git a/pkgs/development/python-modules/ovh/default.nix b/pkgs/development/python-modules/ovh/default.nix index 017f75d991c..22e82141cdc 100644 --- a/pkgs/development/python-modules/ovh/default.nix +++ b/pkgs/development/python-modules/ovh/default.nix @@ -17,8 +17,8 @@ buildPythonPackage rec { meta = { description = "Thin wrapper around OVH's APIs"; - homepage = http://api.ovh.com/; + homepage = https://github.com/ovh/python-ovh; license = lib.licenses.bsd2; maintainers = [ lib.maintainers.makefu ]; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/pafy/default.nix b/pkgs/development/python-modules/pafy/default.nix index 75a16f5c53b..53218146557 100644 --- a/pkgs/development/python-modules/pafy/default.nix +++ b/pkgs/development/python-modules/pafy/default.nix @@ -1,11 +1,11 @@ { lib, buildPythonPackage, youtube-dl, fetchPypi }: buildPythonPackage rec { pname = "pafy"; - version = "0.5.4"; + version = "0.5.5"; src = fetchPypi { inherit pname version; - sha256 = "e842dc589a339a870b5869cc3802f2e95824edf347f65128223cd5ebdff21024"; + sha256 = "364f1d1312c89582d97dc7225cf6858cde27cb11dfd64a9c2bab1a2f32133b1e"; }; # No tests included in archive @@ -15,7 +15,7 @@ buildPythonPackage rec { meta = with lib; { description = "A library to download YouTube content and retrieve metadata"; - homepage = http://np1.github.io/pafy/; + homepage = https://github.com/mps-youtube/pafy; license = licenses.lgpl3Plus; maintainers = with maintainers; [ odi ]; }; diff --git a/pkgs/development/python-modules/pandas/2.nix b/pkgs/development/python-modules/pandas/2.nix index 6283addcb6e..e4f65a94dc5 100644 --- a/pkgs/development/python-modules/pandas/2.nix +++ b/pkgs/development/python-modules/pandas/2.nix @@ -113,7 +113,7 @@ in buildPythonPackage rec { # https://github.com/pandas-dev/pandas/issues/14866 # pandas devs are no longer testing i686 so safer to assume it's broken broken = stdenv.isi686; - homepage = http://pandas.pydata.org/; + homepage = "https://pandas.pydata.org/"; description = "Python Data Analysis Library"; license = stdenv.lib.licenses.bsd3; maintainers = with stdenv.lib.maintainers; [ raskin knedlsepp ]; diff --git a/pkgs/development/python-modules/pandas/default.nix b/pkgs/development/python-modules/pandas/default.nix index 218194812b8..65ab5881df9 100644 --- a/pkgs/development/python-modules/pandas/default.nix +++ b/pkgs/development/python-modules/pandas/default.nix @@ -111,7 +111,7 @@ in buildPythonPackage rec { # https://github.com/pandas-dev/pandas/issues/14866 # pandas devs are no longer testing i686 so safer to assume it's broken broken = stdenv.isi686; - homepage = http://pandas.pydata.org/; + homepage = https://pandas.pydata.org/; description = "Python Data Analysis Library"; license = stdenv.lib.licenses.bsd3; maintainers = with stdenv.lib.maintainers; [ raskin fridh knedlsepp ]; diff --git a/pkgs/development/python-modules/panel/default.nix b/pkgs/development/python-modules/panel/default.nix index 99575715d94..aefab404668 100644 --- a/pkgs/development/python-modules/panel/default.nix +++ b/pkgs/development/python-modules/panel/default.nix @@ -32,7 +32,7 @@ buildPythonPackage rec { meta = with lib; { description = "A high level dashboarding library for python visualization libraries"; - homepage = http://pyviz.org; + homepage = https://pyviz.org; license = licenses.bsd3; maintainers = [ maintainers.costrouc ]; }; diff --git a/pkgs/development/python-modules/parameterized/default.nix b/pkgs/development/python-modules/parameterized/default.nix index b930b8dcd17..f5dd38cc743 100644 --- a/pkgs/development/python-modules/parameterized/default.nix +++ b/pkgs/development/python-modules/parameterized/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "parameterized"; - version = "0.7.0"; + version = "0.7.1"; src = fetchPypi { inherit pname version; - sha256 = "d8c8837fb677ed2d5a93b9e2308ce0da3aeb58cf513120d501e0b7af14da78d5"; + sha256 = "6a94dbea30c6abde99fd4c2f2042c1bf7f980e48908bf92ead62394f93cf57ed"; }; # Tests require some python3-isms but code works without. diff --git a/pkgs/development/python-modules/passlib/default.nix b/pkgs/development/python-modules/passlib/default.nix index 6f82c446a1f..e49ad50d91f 100644 --- a/pkgs/development/python-modules/passlib/default.nix +++ b/pkgs/development/python-modules/passlib/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "passlib"; - version = "1.7.1"; + version = "1.7.2"; src = fetchPypi { inherit pname version; - sha256 = "3d948f64138c25633613f303bcc471126eae67c04d5e3f6b7b8ce6242f8653e0"; + sha256 = "8d666cef936198bc2ab47ee9b0410c94adf2ba798e5a84bf220be079ae7ab6a8"; }; checkInputs = [ nose ]; diff --git a/pkgs/development/python-modules/pbr/default.nix b/pkgs/development/python-modules/pbr/default.nix index a03975e1b39..310d16026a9 100644 --- a/pkgs/development/python-modules/pbr/default.nix +++ b/pkgs/development/python-modules/pbr/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pbr"; - version = "5.4.3"; + version = "5.4.4"; src = fetchPypi { inherit pname version; - sha256 = "2c8e420cd4ed4cec4e7999ee47409e876af575d4c35a45840d59e8b5f3155ab8"; + sha256 = "139d2625547dbfa5fb0b81daebb39601c478c21956dc57e2e07b74450a8c506b"; }; # circular dependencies with fixtures diff --git a/pkgs/development/python-modules/pdfminer_six/default.nix b/pkgs/development/python-modules/pdfminer_six/default.nix index 57023e786f0..5f3cc06b5af 100644 --- a/pkgs/development/python-modules/pdfminer_six/default.nix +++ b/pkgs/development/python-modules/pdfminer_six/default.nix @@ -1,28 +1,30 @@ -{ stdenv, buildPythonPackage, python, fetchFromGitHub, six, pycryptodome, chardet, nose, pytest, sortedcontainers }: +{ stdenv, buildPythonPackage, fetchFromGitHub, isPy3k, six, pycryptodome, chardet, nose, sortedcontainers }: buildPythonPackage rec { pname = "pdfminer_six"; - version = "20181108"; + version = "20191020"; + # No tests in PyPi Tarball src = fetchFromGitHub { owner = "pdfminer"; repo = "pdfminer.six"; rev = version; - sha256 = "1v8pcx43fgidv1g54s92k85anvcss08blkhm4yi1hn1ybl0mmw6c"; + sha256 = "1fqn4ilcscvw6ws9a1yqiprha9d3rgw3d0280clkbk6s4l26wm9h"; }; - propagatedBuildInputs = [ six pycryptodome chardet sortedcontainers ]; + propagatedBuildInputs = [ six pycryptodome sortedcontainers ] + ++ stdenv.lib.optionals isPy3k [ chardet ]; - checkInputs = [ nose pytest ]; + checkInputs = [ nose ]; checkPhase = '' - ${python.interpreter} -m pytest + nosetests ''; meta = with stdenv.lib; { description = "fork of PDFMiner using six for Python 2+3 compatibility"; homepage = https://github.com/pdfminer/pdfminer.six; license = licenses.mit; - maintainers = with maintainers; [ psyanticy ]; + maintainers = with maintainers; [ psyanticy marsam ]; }; } diff --git a/pkgs/development/python-modules/periodictable/default.nix b/pkgs/development/python-modules/periodictable/default.nix index f2d484bbfa4..c88da3ff07f 100644 --- a/pkgs/development/python-modules/periodictable/default.nix +++ b/pkgs/development/python-modules/periodictable/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec{ pname = "periodictable"; - version = "1.5.1"; + version = "1.5.2"; propagatedBuildInputs = [numpy pyparsing]; src = fetchPypi { inherit pname version; - sha256 = "0qd7rjhlnb2xxi7rhpidh9pabg2m4rq6zhdcsyiymni8mgjm8dfg"; + sha256 = "1lx03xirh3hcrzkwrz91dmdzcj01bykq59hccd83ai901jzqmshz"; }; meta = { diff --git a/pkgs/development/python-modules/pgspecial/default.nix b/pkgs/development/python-modules/pgspecial/default.nix index 5c5f342651b..ccca0dd155e 100644 --- a/pkgs/development/python-modules/pgspecial/default.nix +++ b/pkgs/development/python-modules/pgspecial/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pgspecial"; - version = "1.11.7"; + version = "1.11.9"; src = fetchPypi { inherit pname version; - sha256 = "0wy1zmd44y0vl0kxx2y53g6lpipmixbwwrg6c2r7rc3nwa0icl7p"; + sha256 = "77f8651450ccbde7d3036cfe93486a4eeeb5ade28d1ebc4b2ba186fea0023c56"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/phonenumbers/default.nix b/pkgs/development/python-modules/phonenumbers/default.nix index cb81c2b40fc..d9b3cb6b172 100644 --- a/pkgs/development/python-modules/phonenumbers/default.nix +++ b/pkgs/development/python-modules/phonenumbers/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "phonenumbers"; - version = "8.10.23"; + version = "8.11.0"; src = fetchPypi { inherit pname version; - sha256 = "b31916281b0819c1e24ee3c21561ecd8be5af9381088557a986af85051a243bf"; + sha256 = "1gc38v26hp638vnx4hmyv2gfyjs8k8lbvnlxfixgm60v4v7wykln"; }; meta = { diff --git a/pkgs/development/python-modules/pikepdf/default.nix b/pkgs/development/python-modules/pikepdf/default.nix index ad2bae4a45e..8712a8de431 100644 --- a/pkgs/development/python-modules/pikepdf/default.nix +++ b/pkgs/development/python-modules/pikepdf/default.nix @@ -22,12 +22,12 @@ buildPythonPackage rec { pname = "pikepdf"; - version = "1.6.5"; + version = "1.8.1"; disabled = ! isPy3k; src = fetchPypi { inherit pname version; - sha256 = "ee935eea84fa5fc1879355de38cd47216e5e922553303ee045c35917e13b2fcf"; + sha256 = "a57a295296820087e66a3c62569d288958f29d1a354701ace6639a7692cc3022"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/pluggy/default.nix b/pkgs/development/python-modules/pluggy/default.nix index d094a2a26fc..ecb01f252f4 100644 --- a/pkgs/development/python-modules/pluggy/default.nix +++ b/pkgs/development/python-modules/pluggy/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "pluggy"; - version = "0.13.0"; + version = "0.13.1"; src = fetchPypi { inherit pname version; - sha256 = "fa5fa1622fa6dd5c030e9cad086fa19ef6a0cf6d7a2d12318e10cb49d6d68f34"; + sha256 = "15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/polyline/default.nix b/pkgs/development/python-modules/polyline/default.nix new file mode 100644 index 00000000000..6a5df880fd6 --- /dev/null +++ b/pkgs/development/python-modules/polyline/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchPypi +, six +, flake8 +, nose +}: + +buildPythonPackage rec { + pname = "polyline"; + version = "1.4.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0x60lm3ccq9zrcqlzyk041xgr1mi0k9lzyyv3cbbdiq9kb88jzvw"; + }; + + propagatedBuildInputs = [ six ]; + checkInputs = [ flake8 nose ]; + checkPhase = '' + nosetests + ''; + + meta = with lib; { + homepage = https://github.com/hicsail/polyline; + license = licenses.mit; + description = "Python implementation of Google's Encoded Polyline Algorithm Format."; + longDescription = "polyline is a Python implementation of Google's Encoded Polyline Algorithm Format (http://goo.gl/PvXf8Y). It is essentially a port of https://github.com/mapbox/polyline built with Python 2 and 3 support in mind."; + maintainers = with maintainers; [ ersin ]; + }; +} diff --git a/pkgs/development/python-modules/pomegranate/default.nix b/pkgs/development/python-modules/pomegranate/default.nix index 4493ef51075..5f0c8cd8dad 100644 --- a/pkgs/development/python-modules/pomegranate/default.nix +++ b/pkgs/development/python-modules/pomegranate/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pomegranate"; - version = "0.11.1"; + version = "0.11.2"; src = fetchFromGitHub { repo = pname; owner = "jmschrei"; rev = "v${version}"; - sha256 = "19kdzqyj86aldsls68a6ymrs8sasv3a8r4wjmfdmcif1xsg6zb4q"; + sha256 = "070ciwww1lhjmfwd5n1kcwgxwbgdfvmhjs4l156bnf08z9dlrafl"; }; propagatedBuildInputs = [ numpy scipy cython networkx joblib pyyaml ]; diff --git a/pkgs/development/python-modules/preggy/default.nix b/pkgs/development/python-modules/preggy/default.nix index b88366de88f..cf2867322f7 100644 --- a/pkgs/development/python-modules/preggy/default.nix +++ b/pkgs/development/python-modules/preggy/default.nix @@ -2,14 +2,14 @@ buildPythonPackage rec { pname = "preggy"; - version = "1.4.2"; + version = "1.4.4"; propagatedBuildInputs = [ six unidecode ]; checkInputs = [ nose yanc ]; src = fetchPypi { inherit pname version; - sha256 = "0g4ifjh01dkmdzs4621ahk8hpkngid1xxhl51jvzy4h4li4590hw"; + sha256 = "25ba803afde4f35ef543a60915ced2e634926235064df717c3cb3e4e3eb4670c"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/progressbar2/default.nix b/pkgs/development/python-modules/progressbar2/default.nix index b9e16f6e457..aa6c9b70926 100644 --- a/pkgs/development/python-modules/progressbar2/default.nix +++ b/pkgs/development/python-modules/progressbar2/default.nix @@ -23,11 +23,6 @@ buildPythonPackage rec { sha256 = "7538d02045a1fd3aa2b2834bfda463da8755bd3ff050edc6c5ddff3bc616215f"; }; - postPatch = '' - rm -r tests/__pycache__ - rm tests/*.pyc - ''; - propagatedBuildInputs = [ python-utils ]; nativeBuildInputs = [ pytestrunner ]; checkInputs = [ diff --git a/pkgs/development/python-modules/psd-tools/default.nix b/pkgs/development/python-modules/psd-tools/default.nix index bdabdae2691..38285b68563 100644 --- a/pkgs/development/python-modules/psd-tools/default.nix +++ b/pkgs/development/python-modules/psd-tools/default.nix @@ -4,7 +4,7 @@ buildPythonPackage rec { pname = "psd-tools"; - version = "1.8.30"; + version = "1.8.32"; meta = { description = "Python package for reading Adobe Photoshop PSD files"; @@ -14,7 +14,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "101d7df09f9a745f7729c25a1621428e501910ed6436d639e1aded4b03c14e02"; + sha256 = "fff16658c9ca6bc586adbe0ab060a7d0b7d057eb2a600c3b2001c0558873fb94"; }; propagatedBuildInputs = [ docopt pillow ]; diff --git a/pkgs/development/python-modules/psutil/default.nix b/pkgs/development/python-modules/psutil/default.nix index a3d909bb3d4..388716cb700 100644 --- a/pkgs/development/python-modules/psutil/default.nix +++ b/pkgs/development/python-modules/psutil/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "psutil"; - version = "5.6.5"; + version = "5.6.7"; src = fetchPypi { inherit pname version; - sha256 = "d051532ac944f1be0179e0506f6889833cf96e466262523e57a871de65a15147"; + sha256 = "ffad8eb2ac614518bbe3c0b8eb9dffdb3a8d2e3a7d5da51c5b974fb723a5c5aa"; }; # No tests in archive diff --git a/pkgs/development/python-modules/publicsuffix/default.nix b/pkgs/development/python-modules/publicsuffix/default.nix index 9c90161c6ea..027b017c23e 100644 --- a/pkgs/development/python-modules/publicsuffix/default.nix +++ b/pkgs/development/python-modules/publicsuffix/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "publicsuffix"; - version = "1.1.0"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "1adx520249z2cy7ykwjr1k190mn2888wqn9jf8qm27ly4qymjxxf"; + sha256 = "22ce1d65ab6af5e9b2122e2443facdb93fb5c4abf24138099cb10fe7989f43b6"; }; diff --git a/pkgs/development/python-modules/pybullet/default.nix b/pkgs/development/python-modules/pybullet/default.nix index f4c12f48542..b17e8a5aa94 100644 --- a/pkgs/development/python-modules/pybullet/default.nix +++ b/pkgs/development/python-modules/pybullet/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "pybullet"; - version = "2.5.7"; + version = "2.5.8"; src = fetchPypi { inherit pname version; - sha256 = "82a235a8fe3c8dee753d765c295ff0da92bcb5096209d26a0cfc3f5c6054e374"; + sha256 = "5824e902e0dd8bf7177ce5d9e038c6b04be65f72621fe13f93ec15c9d9c85a49"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/pycdio/default.nix b/pkgs/development/python-modules/pycdio/default.nix index f7a64b9bde4..5b1d774c169 100644 --- a/pkgs/development/python-modules/pycdio/default.nix +++ b/pkgs/development/python-modules/pycdio/default.nix @@ -4,20 +4,23 @@ , setuptools , nose , pkgs -, isPy27 }: buildPythonPackage rec { pname = "pycdio"; version = "2.1.0"; - disabled = !isPy27; src = fetchPypi { inherit pname version; sha256 = "01b7vqqfry071p60sabydym7r3m3rxszyqpdbs1qi5rk2sfyblnn"; }; - prePatch = "sed -i -e '/DRIVER_BSDI/d' pycdio.py"; + prePatch = '' + substituteInPlace setup.py \ + --replace 'library_dirs=library_dirs' 'library_dirs=[dir.decode("utf-8") for dir in library_dirs]' \ + --replace 'include_dirs=include_dirs' 'include_dirs=[dir.decode("utf-8") for dir in include_dirs]' \ + --replace 'runtime_library_dirs=runtime_lib_dirs' 'runtime_library_dirs=[dir.decode("utf-8") for dir in runtime_lib_dirs]' + ''; preConfigure = '' patchShebangs . diff --git a/pkgs/development/python-modules/pyfaidx/default.nix b/pkgs/development/python-modules/pyfaidx/default.nix index 26c36e70d0c..eb0b573c438 100644 --- a/pkgs/development/python-modules/pyfaidx/default.nix +++ b/pkgs/development/python-modules/pyfaidx/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pyfaidx"; - version = "0.5.5.2"; + version = "0.5.7"; src = fetchPypi { inherit pname version; - sha256 = "1akc8hk8rlw7sv07bv1n2r471acvmxwc57gb69frjpcwggf2phls"; + sha256 = "512c409b36eadfe39c40e46112d8f96b29fdc1032dc424da2bdc783d476f5b0a"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/pyftdi/default.nix b/pkgs/development/python-modules/pyftdi/default.nix index ecb36313f34..09cb17098dd 100644 --- a/pkgs/development/python-modules/pyftdi/default.nix +++ b/pkgs/development/python-modules/pyftdi/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "pyftdi"; - version = "0.30.3"; + version = "0.42.2"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "ed55f0cb2d2f84b6e97be9583d582480ba9777cb0179aac0bb0ac480cd6760f5"; + sha256 = "1bpb2rq7bc3p4g9qrfp4a7qcic79cvv1wh17j231bnpmy48njhvj"; }; propagatedBuildInputs = [ pyusb pyserial ]; diff --git a/pkgs/development/python-modules/pygobject/default.nix b/pkgs/development/python-modules/pygobject/default.nix index d685e3541f9..268202de865 100644 --- a/pkgs/development/python-modules/pygobject/default.nix +++ b/pkgs/development/python-modules/pygobject/default.nix @@ -2,21 +2,17 @@ buildPythonPackage rec { pname = "pygobject"; - version = "2.28.6"; + version = "2.28.7"; format = "other"; src = fetchurl { url = "mirror://gnome/sources/pygobject/2.28/${pname}-${version}.tar.xz"; - sha256 = "1f5dfxjnil2glfwxnqr14d2cjfbkghsbsn8n04js2c2icr7iv2pv"; + sha256 = "0nkam61rsn7y3wik3vw46wk5q2cjfh2iph57hl9m39rc8jijb7dv"; }; outputs = [ "out" "devdoc" ]; - patches = [ - # Fix warning spam - ./pygobject-2.28.6-set_qdata.patch - ./pygobject-2.28.6-gio-types-2.32.patch - ] ++ stdenv.lib.optionals stdenv.isDarwin [ + patches = stdenv.lib.optionals stdenv.isDarwin [ ./pygobject-2.0-fix-darwin.patch ]; @@ -38,8 +34,8 @@ buildPythonPackage rec { ''; meta = { - homepage = http://live.gnome.org/PyGObject; - description = "Python bindings for Glib"; + homepage = "https://pygobject.readthedocs.io/"; + description = "Python bindings for GLib"; platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/development/python-modules/pygobject/pygobject-2.28.6-gio-types-2.32.patch b/pkgs/development/python-modules/pygobject/pygobject-2.28.6-gio-types-2.32.patch deleted file mode 100644 index fa0adf54ad0..00000000000 --- a/pkgs/development/python-modules/pygobject/pygobject-2.28.6-gio-types-2.32.patch +++ /dev/null @@ -1,50 +0,0 @@ -From 42d01f060c5d764baa881d13c103d68897163a49 Mon Sep 17 00:00:00 2001 -From: Ryan Lortie <desrt@desrt.ca> -Date: Mon, 12 Mar 2012 16:44:14 -0400 -Subject: [PATCH] gio-types.defs: change some enums to flags - -These flags types were originally incorrectly handled in glib as being -enums. That bug was fixed, but they're still enums here, leading to -warnings about the mismatch. - -Change them to flags. - -https://bugzilla.gnome.org/show_bug.cgi?id=668522 ---- - gio/gio-types.defs | 6 +++--- - 1 files changed, 3 insertions(+), 3 deletions(-) - -diff --git a/gio/gio-types.defs b/gio/gio-types.defs -index 331e0bc..7eee5c8 100644 ---- a/gio/gio-types.defs -+++ b/gio/gio-types.defs -@@ -526,7 +526,7 @@ - ) - ) - --(define-enum MountMountFlags -+(define-flags MountMountFlags - (in-module "gio") - (c-name "GMountMountFlags") - (gtype-id "G_TYPE_MOUNT_MOUNT_FLAGS") -@@ -545,7 +545,7 @@ - ) - ) - --(define-enum DriveStartFlags -+(define-flags DriveStartFlags - (in-module "gio") - (c-name "GDriveStartFlags") - (gtype-id "G_TYPE_DRIVE_START_FLAGS") -@@ -770,7 +770,7 @@ - ) - ) - --(define-enum SocketMsgFlags -+(define-flags SocketMsgFlags - (in-module "gio") - (c-name "GSocketMsgFlags") - (gtype-id "G_TYPE_SOCKET_MSG_FLAGS") --- -1.7.8.5 - diff --git a/pkgs/development/python-modules/pygobject/pygobject-2.28.6-set_qdata.patch b/pkgs/development/python-modules/pygobject/pygobject-2.28.6-set_qdata.patch deleted file mode 100644 index 55376b59d82..00000000000 --- a/pkgs/development/python-modules/pygobject/pygobject-2.28.6-set_qdata.patch +++ /dev/null @@ -1,28 +0,0 @@ -From 42d871eb0b08ee6d55e95cc7e4b90844919555b9 Mon Sep 17 00:00:00 2001 -From: Ivan Stankovic <ivan.stankovic@avl.com> -Date: Tue, 21 Feb 2012 12:24:58 +0100 -Subject: [PATCH] Fix set_qdata warning on accessing NULL gobject property - -https://bugzilla.gnome.org/show_bug.cgi?id=661155 ---- - gobject/pygobject.c | 4 +++- - 1 files changed, 3 insertions(+), 1 deletions(-) - -diff --git a/gobject/pygobject.c b/gobject/pygobject.c -index 6c2f06c..70dc89a 100644 ---- a/gobject/pygobject.c -+++ b/gobject/pygobject.c -@@ -991,7 +991,9 @@ pygobject_new(GObject *obj) - PyObject * - pygobject_new_sunk(GObject *obj) - { -- g_object_set_qdata (obj, pygobject_ref_sunk_key, GINT_TO_POINTER (1)); -+ if (obj) -+ g_object_set_qdata (obj, pygobject_ref_sunk_key, GINT_TO_POINTER (1)); -+ - return pygobject_new_full(obj, TRUE, NULL); - } - --- -1.7.8.5 - diff --git a/pkgs/development/python-modules/pygtk/default.nix b/pkgs/development/python-modules/pygtk/default.nix index 09ccb5c3d95..4779f76aed4 100644 --- a/pkgs/development/python-modules/pygtk/default.nix +++ b/pkgs/development/python-modules/pygtk/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python, pkgconfig, gtk2, pygobject2, pycairo +{ stdenv, fetchurl, fetchpatch, python, pkgconfig, gtk2, pygobject2, pycairo, pango , buildPythonPackage, libglade ? null, isPy3k }: buildPythonPackage rec { @@ -12,8 +12,22 @@ buildPythonPackage rec { sha256 = "04k942gn8vl95kwf0qskkv6npclfm31d78ljkrkgyqxxcni1w76d"; }; + patches = [ + # https://bugzilla.gnome.org/show_bug.cgi?id=660216 - fixes some memory leaks + (fetchpatch { + url = "https://gitlab.gnome.org/Archive/pygtk/commit/eca72baa5616fbe4dbebea43c7e5940847dc5ab8.diff"; + sha256 = "031px4w5cshcx1sns430sdbr2i007b9zyb2carb3z65nzr77dpdd"; + }) + (fetchpatch { + url = "https://gitlab.gnome.org/Archive/pygtk/commit/4aaa48eb80c6802aec6d03e5695d2a0ff20e0fc2.patch"; + sha256 = "0z8cg7nr3qki8gg8alasdzzyxcihfjlxn518glq5ajglk3q5pzsn"; + }) + ]; + nativeBuildInputs = [ pkgconfig ]; - buildInputs = stdenv.lib.optional (libglade != null) libglade; + buildInputs = [ + pango + ] ++ stdenv.lib.optional (libglade != null) libglade; propagatedBuildInputs = [ gtk2 pygobject2 pycairo ]; diff --git a/pkgs/development/python-modules/pyhomematic/default.nix b/pkgs/development/python-modules/pyhomematic/default.nix index e55ef007eab..33df2985cfc 100644 --- a/pkgs/development/python-modules/pyhomematic/default.nix +++ b/pkgs/development/python-modules/pyhomematic/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "pyhomematic"; - version = "0.1.61"; + version = "0.1.62"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "7ef0f3b2ed30023297840d365cf94dcf81b7ee6d2be62fff14730e9eb7b59c00"; + sha256 = "3547ad176f287a9d3b4409692485b6fb456107d70350a32071423e13803cfdab"; }; # PyPI tarball does not include tests/ directory diff --git a/pkgs/development/python-modules/pymavlink/default.nix b/pkgs/development/python-modules/pymavlink/default.nix new file mode 100644 index 00000000000..2d137ec01aa --- /dev/null +++ b/pkgs/development/python-modules/pymavlink/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, fetchPypi, future, lxml }: + +buildPythonPackage rec { + pname = "pymavlink"; + version = "2.4.1"; + + src = fetchPypi { + inherit pname version; + sha256 = "0y9rz3piddzdjpp7d5w9xi6lc9v9b4p4375a5hrfiphrmhds85i3"; + }; + + propagatedBuildInputs = [ future lxml ]; + + # No tests included in PyPI tarball + doCheck = false; + + meta = with lib; { + description = "Python MAVLink interface and utilities"; + homepage = "https://github.com/ArduPilot/pymavlink"; + license = licenses.lgpl3; + maintainers = with maintainers; [ lopsided98 ]; + }; +} diff --git a/pkgs/development/python-modules/pymupdf/default.nix b/pkgs/development/python-modules/pymupdf/default.nix index 98071962d4f..c3f36c9c219 100644 --- a/pkgs/development/python-modules/pymupdf/default.nix +++ b/pkgs/development/python-modules/pymupdf/default.nix @@ -1,11 +1,11 @@ { stdenv, buildPythonPackage, fetchPypi, mupdf, swig }: buildPythonPackage rec { pname = "PyMuPDF"; - version = "1.16.8"; + version = "1.16.9"; src = fetchPypi { inherit pname version; - sha256 = "3099b48a796885c0760d8ac5439131dee1bc6adadf7ae008417e0ca8d8fcdf15"; + sha256 = "09h960ns42bbrv10bg99fad193yvg64snhw8x7d78wg3qqvnnicc"; }; patchPhase = '' diff --git a/pkgs/development/python-modules/pyopengl/default.nix b/pkgs/development/python-modules/pyopengl/default.nix index b00502700e8..a425fcf5be9 100644 --- a/pkgs/development/python-modules/pyopengl/default.nix +++ b/pkgs/development/python-modules/pyopengl/default.nix @@ -7,11 +7,12 @@ buildPythonPackage rec { pname = "pyopengl"; - version = "3.1.0"; + version = "3.1.4"; src = fetchPypi { - inherit pname version; - sha256 = "9b47c5c3a094fa518ca88aeed35ae75834d53e4285512c61879f67a48c94ddaf"; + pname = "PyOpenGL"; + inherit version; + sha256 = "0bdf5ed600df30c8830455702338902528717c0af85ac5914f1dc5aa0bfa6eee"; }; propagatedBuildInputs = [ pkgs.libGLU pkgs.libGL pkgs.freeglut pillow ]; diff --git a/pkgs/development/python-modules/pyrsistent/default.nix b/pkgs/development/python-modules/pyrsistent/default.nix index b4edb02258a..bbed677dfaf 100644 --- a/pkgs/development/python-modules/pyrsistent/default.nix +++ b/pkgs/development/python-modules/pyrsistent/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pyrsistent"; - version = "0.15.5"; + version = "0.15.6"; src = fetchPypi { inherit pname version; - sha256 = "eb6545dbeb1aa69ab1fb4809bfbf5a8705e44d92ef8fc7c2361682a47c46c778"; + sha256 = "f3b280d030afb652f79d67c5586157c5c1355c9a58dfc7940566e28d28f3df1b"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/pyserial-asyncio/default.nix b/pkgs/development/python-modules/pyserial-asyncio/default.nix new file mode 100644 index 00000000000..c299ad8acae --- /dev/null +++ b/pkgs/development/python-modules/pyserial-asyncio/default.nix @@ -0,0 +1,24 @@ +{ stdenv, buildPythonPackage, fetchPypi, isPy3k +, pyserial }: + +buildPythonPackage rec { + pname = "pyserial-asyncio"; + version = "0.4"; + + disabled = !isPy3k; # Doesn't support python older than 3.4 + + buildInputs = [ pyserial ]; + + src = fetchPypi { + inherit pname version; + sha256 = "1vlsb0d03krxlj7vpvyhpinnyxyy8s3lk5rs8ba2932dhyl7f1n4"; + }; + + meta = with stdenv.lib; { + description = "asyncio extension package for pyserial"; + homepage = "https://github.com/pyserial/pyserial-asyncio"; + license = licenses.bsd3; + maintainers = with maintainers; [ etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/python-modules/pytest/4.nix b/pkgs/development/python-modules/pytest/4.nix index a3beae4e0cf..1148c87f0ba 100644 --- a/pkgs/development/python-modules/pytest/4.nix +++ b/pkgs/development/python-modules/pytest/4.nix @@ -3,7 +3,7 @@ , atomicwrites, mock, writeText, pathlib2, wcwidth, packaging, isPyPy }: buildPythonPackage rec { - version = "4.6.6"; + version = "4.6.7"; pname = "pytest"; preCheck = '' @@ -13,7 +13,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "692d9351353ef709c1126266579edd4fd469dcf6b5f4f583050f72161d6f3592"; + sha256 = "9ea149066f566c943d3122f4b1cf1b577cab73189d11f490b54703fa5fa9df50"; }; checkInputs = [ hypothesis mock ]; diff --git a/pkgs/development/python-modules/python-twitter/default.nix b/pkgs/development/python-modules/python-twitter/default.nix new file mode 100644 index 00000000000..6210c13f56e --- /dev/null +++ b/pkgs/development/python-modules/python-twitter/default.nix @@ -0,0 +1,44 @@ +{ stdenv +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, pytestrunner +, future +, requests +, responses +, requests_oauthlib +, pytest +, hypothesis +}: + +buildPythonPackage rec { + pname = "python-twitter"; + version = "3.5"; + + # No tests in PyPi Tarball + src = fetchFromGitHub { + owner = "bear"; + repo = pname; + rev = "v${version}"; + sha256 = "08ydmf6dcd416cvw6xq1wxsz6b9s21f2mf9fh3y4qz9swj6n9h8z"; + }; + + patches = [ + # Fix tests. Remove with the next release + (fetchpatch { + url = "https://github.com/bear/python-twitter/commit/f7eb83d9dca3ba0ee93e629ba5322732f99a3a30.patch"; + sha256 = "008b1bd03wwngs554qb136lsasihql3yi7vlcacmk4s5fmr6klqw"; + }) + ]; + + nativeBuildInputs = [ pytestrunner ]; + propagatedBuildInputs = [ future requests requests_oauthlib ]; + checkInputs = [ pytest responses hypothesis ]; + + meta = with stdenv.lib; { + description = "A Python wrapper around the Twitter API"; + homepage = "https://github.com/bear/python-twitter"; + license = licenses.asl20; + maintainers = [ maintainers.marsam ]; + }; +} diff --git a/pkgs/development/python-modules/python_mimeparse/default.nix b/pkgs/development/python-modules/python_mimeparse/default.nix index 90da2f256d4..9484d24f5e2 100644 --- a/pkgs/development/python-modules/python_mimeparse/default.nix +++ b/pkgs/development/python-modules/python_mimeparse/default.nix @@ -17,7 +17,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "A module provides basic functions for parsing mime-type names and matching them against a list of media-ranges"; - homepage = https://code.google.com/p/mimeparse/; + homepage = "https://github.com/dbtsai/python-mimeparse"; license = licenses.mit; }; diff --git a/pkgs/development/python-modules/pythondialog/default.nix b/pkgs/development/python-modules/pythondialog/default.nix index d2c82cf83f1..d19fbd27116 100644 --- a/pkgs/development/python-modules/pythondialog/default.nix +++ b/pkgs/development/python-modules/pythondialog/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pythondialog"; - version = "3.4.0"; + version = "3.5.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1728ghsran47jczn9bhlnkvk5bvqmmbihabgif5h705b84r1272c"; + sha256 = "11ydvllwll23qmcd3saachcxzn1dj5if3kc36p37ncf06xc5c0m4"; }; patchPhase = '' diff --git a/pkgs/development/python-modules/pythonirclib/default.nix b/pkgs/development/python-modules/pythonirclib/default.nix index 35873d301be..d4f81a82546 100644 --- a/pkgs/development/python-modules/pythonirclib/default.nix +++ b/pkgs/development/python-modules/pythonirclib/default.nix @@ -27,7 +27,7 @@ buildPythonPackage rec { meta = with stdenv.lib; { description = "Python IRC library"; - homepage = https://bitbucket.org/jaraco/irc; + homepage = "https://github.com/jaraco/irc"; license = with licenses; [ lgpl21 ]; }; diff --git a/pkgs/development/python-modules/pyvcd/default.nix b/pkgs/development/python-modules/pyvcd/default.nix index b3d4483d65d..0f97616e640 100644 --- a/pkgs/development/python-modules/pyvcd/default.nix +++ b/pkgs/development/python-modules/pyvcd/default.nix @@ -6,12 +6,12 @@ , pytest }: buildPythonPackage rec { - version = "0.1.4"; + version = "0.1.5"; pname = "pyvcd"; src = fetchPypi { inherit pname version; - sha256 = "0dv9wac5y5z9j54ypyc59csxdiy9ybpphw9ipxp1k8nfg65q9jxx"; + sha256 = "9e796f8d00d8392716bef9759f118231f5d77d2fff79d8a32151e3bb5579ff25"; }; buildInputs = [ setuptools_scm ]; diff --git a/pkgs/development/python-modules/pywebkitgtk/default.nix b/pkgs/development/python-modules/pywebkitgtk/default.nix deleted file mode 100644 index c76f1f47077..00000000000 --- a/pkgs/development/python-modules/pywebkitgtk/default.nix +++ /dev/null @@ -1,27 +0,0 @@ -{ stdenv -, buildPythonPackage -, fetchurl -, pkgs -, pygtk -}: - -buildPythonPackage rec { - pname = "pywebkitgtk"; - version = "1.1.8"; - format = "other"; - - src = fetchurl { - url = "http://pywebkitgtk.googlecode.com/files/${pname}-${version}.tar.bz2"; - sha256 = "1svlwyl61rvbqbcbalkg6pbf38yjyv7qkq9sx4x35yk69lscaac2"; - }; - - nativeBuildInputs = [ pkgs.pkgconfig ]; - buildInputs = [ pygtk pkgs.gtk2 pkgs.libxml2 pkgs.libxslt pkgs.libsoup pkgs.webkitgtk24x-gtk2 pkgs.icu ]; - - meta = with stdenv.lib; { - homepage = "https://code.google.com/p/pywebkitgtk/"; - description = "Python bindings for the WebKit GTK port"; - license = licenses.lgpl2Plus; - }; - -} diff --git a/pkgs/development/python-modules/pywebpush/default.nix b/pkgs/development/python-modules/pywebpush/default.nix index e6bf9f3ba48..ff9b20f8177 100644 --- a/pkgs/development/python-modules/pywebpush/default.nix +++ b/pkgs/development/python-modules/pywebpush/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "pywebpush"; - version = "1.10.0"; + version = "1.10.1"; src = fetchPypi { inherit pname version; - sha256 = "de8b7e638c6b595c6405f16fd5356e92d2feb8237ab4e50a89770e4ed93aebd6"; + sha256 = "e80ae0ea978b2e3b7860d2a9ae836528f5fa2e13936673e0b6613589965937ee"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/qimage2ndarray/default.nix b/pkgs/development/python-modules/qimage2ndarray/default.nix new file mode 100644 index 00000000000..73a0004e654 --- /dev/null +++ b/pkgs/development/python-modules/qimage2ndarray/default.nix @@ -0,0 +1,32 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k +, numpy +, pyqt5 +, nose +}: + +buildPythonPackage rec { + pname = "qimage2ndarray"; + version = "1.8"; + disabled = !isPy3k; + + src = fetchPypi { + inherit pname version; + sha256 = "7b9eb08a9be27f5439289d90d7d5a5942aad403d5634fe336eb915678c65db48"; + }; + + checkInputs = [ + nose + ]; + + propagatedBuildInputs = [ + numpy + pyqt5 + ]; + + meta = { + homepage = "https://github.com/hmeine/qimage2ndarray"; + description = "A small python extension for quickly converting between QImages and numpy.ndarrays (in both directions)"; + license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/reproject/default.nix b/pkgs/development/python-modules/reproject/default.nix index d16f9fd2929..18fdd682f71 100644 --- a/pkgs/development/python-modules/reproject/default.nix +++ b/pkgs/development/python-modules/reproject/default.nix @@ -6,26 +6,37 @@ , astropy-healpix , astropy-helpers , scipy +, pytest +, pytest-astropy +, cython }: buildPythonPackage rec { pname = "reproject"; - version = "0.5.1"; - - doCheck = false; # tests require pytest-astropy + version = "0.6"; src = fetchPypi { inherit pname version; - sha256 = "069rha55cbm8vsi1qf8zydds42lgkcc97sd57hmjw1mgiz025xrp"; + sha256 = "484fde86d70d972d703038f138d7c2966ddf51171a6e79bd84e82ea270e27af3"; }; propagatedBuildInputs = [ numpy astropy astropy-healpix astropy-helpers scipy ]; + nativeBuildInputs = [ astropy-helpers cython ]; + # Disable automatic update of the astropy-helper module postPatch = '' substituteInPlace setup.cfg --replace "auto_use = True" "auto_use = False" ''; + checkInputs = [ pytest pytest-astropy ]; + + # Tests must be run in the build directory + checkPhase = '' + cd build/lib* + pytest + ''; + meta = with lib; { description = "Reproject astronomical images"; homepage = https://reproject.readthedocs.io; diff --git a/pkgs/development/python-modules/responses/default.nix b/pkgs/development/python-modules/responses/default.nix index d154499c03b..98cf19a8f0a 100644 --- a/pkgs/development/python-modules/responses/default.nix +++ b/pkgs/development/python-modules/responses/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "responses"; - version = "0.10.6"; + version = "0.10.7"; src = fetchPypi { inherit pname version; - sha256 = "502d9c0c8008439cfcdef7e251f507fcfdd503b56e8c0c87c3c3e3393953f790"; + sha256 = "46d4e546a19fc6106bc7e804edd4551ef04690405e41e7e750ebc295d042623b"; }; propagatedBuildInputs = [ cookies mock requests six ]; diff --git a/pkgs/development/python-modules/root_numpy/default.nix b/pkgs/development/python-modules/root_numpy/default.nix deleted file mode 100644 index dc2c5f790b5..00000000000 --- a/pkgs/development/python-modules/root_numpy/default.nix +++ /dev/null @@ -1,27 +0,0 @@ -{ lib, fetchPypi, isPy3k, buildPythonPackage, numpy, root, nose }: - -buildPythonPackage rec { - pname = "root_numpy"; - version = "4.8.0"; - - src = fetchPypi { - inherit pname version; - sha256 = "5842bbcde92133f60a61f56e9f0a875a0dbc2a567cc65a9ac141ecd72e416878"; - }; - - disabled = isPy3k; # blocked by #27649 - checkInputs = [ nose ]; - checkPhase = '' - python setup.py install_lib -d . - nosetests -s -v root_numpy - ''; - - propagatedBuildInputs = [ numpy root ]; - - meta = with lib; { - homepage = http://scikit-hep.org/root_numpy; - license = licenses.bsd3; - description = "The interface between ROOT and NumPy"; - maintainers = with maintainers; [ veprbl ]; - }; -} diff --git a/pkgs/development/python-modules/rootpy/default.nix b/pkgs/development/python-modules/rootpy/default.nix deleted file mode 100644 index 8384510468a..00000000000 --- a/pkgs/development/python-modules/rootpy/default.nix +++ /dev/null @@ -1,30 +0,0 @@ -{ lib, fetchPypi, isPy3k, buildPythonPackage, numpy, matplotlib, root, root_numpy, tables, pytest }: - -buildPythonPackage rec { - pname = "rootpy"; - version = "1.0.1"; - - src = fetchPypi { - inherit pname version; - sha256 = "0zp2bh87l3f0shiqslbvfmavfdj8m80y8fsrz8rsi5pzqj7zr1bx"; - }; - - disabled = isPy3k; - - propagatedBuildInputs = [ matplotlib numpy root root_numpy tables ]; - - checkInputs = [ pytest ]; - checkPhase = '' - # tests fail with /homeless-shelter - export HOME=$PWD - # skip problematic tests - py.test rootpy -k "not test_stl and not test_cpp and not test_xrootd_glob_single and not test_xrootd_glob_multiple" - ''; - - meta = with lib; { - homepage = http://www.rootpy.org; - license = licenses.bsd3; - description = "Pythonic interface to the ROOT framework"; - maintainers = with maintainers; [ veprbl ]; - }; -} diff --git a/pkgs/development/python-modules/runsnakerun/default.nix b/pkgs/development/python-modules/runsnakerun/default.nix index eba8871fd02..b3a38320a2b 100644 --- a/pkgs/development/python-modules/runsnakerun/default.nix +++ b/pkgs/development/python-modules/runsnakerun/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "runsnakerun"; - version = "2.0.4"; + version = "2.0.5"; src = fetchPypi { inherit pname version; - sha256 = "61d03a13f1dcb3c1829f5a146da1fe0cc0e27947558a51e848b6d469902815ef"; + sha256 = "a66a0cdf0333dc3c0830c18e2f3d62f741dea197cd01a7e0059da4886a3a123f"; }; propagatedBuildInputs = [ squaremap wxPython ]; diff --git a/pkgs/development/python-modules/runway-python/default.nix b/pkgs/development/python-modules/runway-python/default.nix index 3c893a9a227..c54c5d73cf6 100644 --- a/pkgs/development/python-modules/runway-python/default.nix +++ b/pkgs/development/python-modules/runway-python/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "runway-python"; - version = "0.5.3"; + version = "0.5.4"; src = fetchPypi { inherit pname version; - sha256 = "30046ced74b5502eca604b1ae766fd3daa1b5ed6379fbe1210730710c752d4f6"; + sha256 = "c5293bca6589747db687c593b81f52dc9df8155367ffa57ddc1993a6f9d95bde"; }; propagatedBuildInputs = [ flask flask-cors numpy pillow gevent wget six colorcet ]; diff --git a/pkgs/development/python-modules/sacremoses/default.nix b/pkgs/development/python-modules/sacremoses/default.nix new file mode 100644 index 00000000000..ef0fcb57dc9 --- /dev/null +++ b/pkgs/development/python-modules/sacremoses/default.nix @@ -0,0 +1,37 @@ +{ buildPythonPackage +, stdenv +, fetchFromGitHub +, click +, six +, tqdm +, joblib +, pytest +}: + +buildPythonPackage rec { + pname = "sacremoses"; + version = "0.0.35"; + + src = fetchFromGitHub { + owner = "alvations"; + repo = pname; + rev = "${version}"; + sha256 = "1gzr56w8yx82mn08wax5m0xyg15ym4ri5l80gmagp8r53443j770"; + }; + + propagatedBuildInputs = [ click six tqdm joblib ]; + + checkInputs = [ pytest ]; + # ignore tests which call to remote host + checkPhase = '' + pytest -k 'not truecase' + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/alvations/sacremoses"; + description = "Python port of Moses tokenizer, truecaser and normalizer"; + license = licenses.lgpl21Plus; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ pashashocky ]; + }; +} diff --git a/pkgs/development/python-modules/sasmodels/default.nix b/pkgs/development/python-modules/sasmodels/default.nix index bf0b1e01563..2aec6dced1c 100644 --- a/pkgs/development/python-modules/sasmodels/default.nix +++ b/pkgs/development/python-modules/sasmodels/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "sasmodels"; - version = "1.0.0"; + version = "1.0.1"; src = fetchFromGitHub { owner = "SasView"; repo = "sasmodels"; rev = "v${version}"; - sha256 = "082wnk10axincc4a62zxyr33l7v80yf7iz630y3421b50fwwyd8j"; + sha256 = "0k4334nxf1n6gwb9m57sqcchmlssglfd116mpl72glmmdc451d5j"; }; buildInputs = [ opencl-headers ]; diff --git a/pkgs/development/python-modules/scipy/default.nix b/pkgs/development/python-modules/scipy/default.nix index dd561c54853..682d70df393 100644 --- a/pkgs/development/python-modules/scipy/default.nix +++ b/pkgs/development/python-modules/scipy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "scipy"; - version = "1.3.2"; + version = "1.3.3"; src = fetchPypi { inherit pname version; - sha256 = "a03939b431994289f39373c57bbe452974a7da724ae7f9620a1beee575434da4"; + sha256 = "64bf4e8ae0db2d42b58477817f648d81e77f0b381d0ea4427385bba3f959380a"; }; checkInputs = [ nose pytest ]; diff --git a/pkgs/development/python-modules/semantic-version/default.nix b/pkgs/development/python-modules/semantic-version/default.nix index f4cf61fbb4d..66499224564 100644 --- a/pkgs/development/python-modules/semantic-version/default.nix +++ b/pkgs/development/python-modules/semantic-version/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "semantic_version"; - version = "2.8.2"; + version = "2.8.3"; src = fetchPypi { inherit pname version; - sha256 = "71c716e99086c44d068262b86e4775aa6db7fabee0743e4e33b00fbf6f672585"; + sha256 = "9dcc6fbad58da3c4d5eee2287025e226bb05c39463f14b741357801baae9dcce"; }; # ModuleNotFoundError: No module named 'tests' diff --git a/pkgs/development/python-modules/send2trash/default.nix b/pkgs/development/python-modules/send2trash/default.nix index 3809c0418e4..bb9f115590e 100644 --- a/pkgs/development/python-modules/send2trash/default.nix +++ b/pkgs/development/python-modules/send2trash/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { owner = "hsoft"; repo = "send2trash"; rev = version; - sha256 = "1w502i5h8xaqf03g6h95h4vs1wqfv6kg925dn63phrwmg1hfz2xx"; + sha256 = "1c76zldhw2ay7q7r00nnzcampjz9lkqfcbzqpm0iqp5i6bmmv30v"; }; doCheck = !stdenv.isDarwin; diff --git a/pkgs/development/python-modules/sentencepiece/default.nix b/pkgs/development/python-modules/sentencepiece/default.nix new file mode 100644 index 00000000000..ab7a5387c02 --- /dev/null +++ b/pkgs/development/python-modules/sentencepiece/default.nix @@ -0,0 +1,15 @@ +{ buildPythonPackage +, stdenv +, sentencepiece +, pkgconfig +}: + +buildPythonPackage rec { + pname = "sentencepiece"; + inherit (sentencepiece) version src meta; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ sentencepiece ]; + + sourceRoot = "source/python"; +} diff --git a/pkgs/development/python-modules/sentry-sdk/default.nix b/pkgs/development/python-modules/sentry-sdk/default.nix index da729f5ab0b..67584789995 100644 --- a/pkgs/development/python-modules/sentry-sdk/default.nix +++ b/pkgs/development/python-modules/sentry-sdk/default.nix @@ -1,12 +1,30 @@ -{ stdenv, buildPythonPackage, fetchPypi, isPy3k, urllib3, certifi, django, flask, tornado, bottle, rq, falcon, celery, pyramid, sanic, aiohttp }: +{ aiohttp +, bottle +, buildPythonPackage +, celery +, certifi +, django +, falcon +, fetchPypi +, flask +, iana-etc +, isPy3k +, libredirect +, pyramid +, rq +, sanic +, stdenv +, tornado +, urllib3 +}: buildPythonPackage rec { pname = "sentry-sdk"; - version = "0.13.2"; + version = "0.13.5"; src = fetchPypi { inherit pname version; - sha256 = "ff1fa7fb85703ae9414c8b427ee73f8363232767c9cd19158f08f6e4f0b58fc7"; + sha256 = "c6b919623e488134a728f16326c6f0bcdab7e3f59e7f4c472a90eea4d6d8fe82"; }; checkInputs = [ django flask tornado bottle rq falcon ] @@ -20,4 +38,14 @@ buildPythonPackage rec { license = licenses.bsd2; maintainers = with maintainers; [ gebner ]; }; + + # The Sentry tests need access to `/etc/protocols` (the tests call + # `socket.getprotobyname('tcp')`, which reads from this file). Normally + # this path isn't available in the sandbox. Therefore, use libredirect + # to make on eavailable from `iana-etc`. This is a test-only operation. + preCheck = '' + export NIX_REDIRECTS=/etc/protocols=${iana-etc}/etc/protocols + export LD_PRELOAD=${libredirect}/lib/libredirect.so + ''; + postCheck = "unset NIX_REDIRECTS LD_PRELOAD"; } diff --git a/pkgs/development/python-modules/setuptools/default.nix b/pkgs/development/python-modules/setuptools/default.nix index ae39271a4b0..f52a4931377 100644 --- a/pkgs/development/python-modules/setuptools/default.nix +++ b/pkgs/development/python-modules/setuptools/default.nix @@ -13,7 +13,7 @@ let pname = "setuptools"; - version = "41.6.0"; + version = "42.0.2"; # Create an sdist of setuptools sdist = stdenv.mkDerivation rec { @@ -23,7 +23,7 @@ let owner = "pypa"; repo = pname; rev = "v${version}"; - sha256 = "0j7bfxq9fwa55ijzw8zn9aa2z2zx4lw2n4jbn1662pjg7v62knv1"; + sha256 = "1xqx3sha5ir40g1h15r7q063bcbl9bvh967vig574k3jgwxrz2ik"; name = "${pname}-${version}-source"; }; diff --git a/pkgs/development/python-modules/shodan/default.nix b/pkgs/development/python-modules/shodan/default.nix index 2e0af01fef0..8cad6885570 100644 --- a/pkgs/development/python-modules/shodan/default.nix +++ b/pkgs/development/python-modules/shodan/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "shodan"; - version = "1.19.1"; + version = "1.20.0"; src = fetchPypi { inherit pname version; - sha256 = "76b8a3ba577a62799e3ea86410aea54e1f403ef6efbf681a3f38baa2bf4e1c58"; + sha256 = "163fbz06xg4ncvmgsg85x2689zd1bvycc3506xqvcgh8xcz3izif"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/simpleeval/default.nix b/pkgs/development/python-modules/simpleeval/default.nix index ca304fc10f6..0aded2f423f 100644 --- a/pkgs/development/python-modules/simpleeval/default.nix +++ b/pkgs/development/python-modules/simpleeval/default.nix @@ -2,10 +2,10 @@ buildPythonPackage rec { pname = "simpleeval"; - version = "0.9.8"; + version = "0.9.10"; src = fetchPypi { inherit pname version; - sha256 = "00fzwbjg98lsnmfzmbgzg1k8q8iqbahcxjnnlhzhb44phrhcxql5"; + sha256 = "1skvl467kj83rzkhk01i0wm8m5vmh6j5znrfdizn6r18ii45a839"; }; meta = { homepage = https://github.com/danthedeckie/simpleeval; diff --git a/pkgs/development/python-modules/soundfile/default.nix b/pkgs/development/python-modules/soundfile/default.nix index 4ba18618674..ff11e75a0de 100644 --- a/pkgs/development/python-modules/soundfile/default.nix +++ b/pkgs/development/python-modules/soundfile/default.nix @@ -11,12 +11,12 @@ buildPythonPackage rec { pname = "soundfile"; - version = "0.10.2"; + version = "0.10.3.post1"; src = fetchPypi { pname = "SoundFile"; inherit version; - sha256 = "0w8mjadairg6av88090kwsridd0k115672b91zlcmf37r0c64zv3"; + sha256 = "0yqhrfz7xkvqrwdxdx2ydy4h467sk7z3gf984y1x2cq7cm1gy329"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/spyder/default.nix b/pkgs/development/python-modules/spyder/default.nix index c2dfcab556f..b707d4a0abc 100644 --- a/pkgs/development/python-modules/spyder/default.nix +++ b/pkgs/development/python-modules/spyder/default.nix @@ -50,9 +50,10 @@ buildPythonPackage rec { ''; dontWrapQtApps = true; - makeWrapperArgs = [ - "\${qtWrapperArgs[@]}" - ]; + + preFixup = '' + makeWrapperArgs+=("''${qtWrapperArgs[@]}") + ''; meta = with stdenv.lib; { description = "Scientific python development environment"; diff --git a/pkgs/development/python-modules/sqlmap/default.nix b/pkgs/development/python-modules/sqlmap/default.nix index 56d2c6799b4..17141897d58 100644 --- a/pkgs/development/python-modules/sqlmap/default.nix +++ b/pkgs/development/python-modules/sqlmap/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "sqlmap"; - version = "1.3.11"; + version = "1.3.12"; src = fetchPypi { inherit pname version; - sha256 = "27ef900b1116776128d0d09bff21f8d2f6bb2ea887cd59fe1a32aec5563aacb0"; + sha256 = "3bad3275e2f29ffa54d4013a2ac2c77e87d01a1d745065d54ed5e60bc68dfbf0"; }; # No tests in archive diff --git a/pkgs/development/python-modules/squaremap/default.nix b/pkgs/development/python-modules/squaremap/default.nix index 3a0e95ab77e..f237d982abb 100644 --- a/pkgs/development/python-modules/squaremap/default.nix +++ b/pkgs/development/python-modules/squaremap/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "squaremap"; - version = "1.0.4"; + version = "1.0.5"; disabled = isPy3k; src = fetchPypi { inherit pname version; - sha256 = "feab6cb3b222993df68440e34825d8a16de2c74fdb290ae3974c86b1d5f3eef8"; + sha256 = "b16ce5950cbfa63e3284015095293cd26ed5e26045fd14d488fb825b4f95e9a8"; }; meta = with stdenv.lib; { diff --git a/pkgs/development/python-modules/starfish/default.nix b/pkgs/development/python-modules/starfish/default.nix index 25ce5a0f651..38934d9497a 100644 --- a/pkgs/development/python-modules/starfish/default.nix +++ b/pkgs/development/python-modules/starfish/default.nix @@ -85,5 +85,6 @@ buildPythonPackage rec { homepage = https://spacetx-starfish.readthedocs.io/en/latest/; license = licenses.mit; maintainers = [ maintainers.costrouc ]; + broken = true; # incompatible with latest python-dateutil, scikit-image }; } diff --git a/pkgs/development/python-modules/statsmodels/default.nix b/pkgs/development/python-modules/statsmodels/default.nix index 46daaa21a99..e45ccdd49c6 100644 --- a/pkgs/development/python-modules/statsmodels/default.nix +++ b/pkgs/development/python-modules/statsmodels/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "statsmodels"; - version = "0.10.1"; + version = "0.10.2"; src = fetchPypi { inherit pname version; - sha256 = "320659a80f916c2edf9dfbe83512d9004bb562b72eedb7d9374562038697fa10"; + sha256 = "9cd2194c6642a8754e85f9a6e6912cdf996bebf6ff715d3cc67f65dadfd37cc9"; }; checkInputs = with self; [ nose ]; diff --git a/pkgs/development/python-modules/streamz/default.nix b/pkgs/development/python-modules/streamz/default.nix index da77691e354..9bbc312b183 100644 --- a/pkgs/development/python-modules/streamz/default.nix +++ b/pkgs/development/python-modules/streamz/default.nix @@ -1,11 +1,9 @@ -{ lib -, buildPythonPackage -, fetchPypi +{ lib, buildPythonPackage, fetchPypi, fetchpatch , tornado , toolz , zict , six -, pytest_4 +, pytest , networkx , distributed , confluent-kafka @@ -22,7 +20,21 @@ buildPythonPackage rec { sha256 = "127rpdjgkcyjifmkqbhmqfbzlgi32n54rybrdxja610qr906y40c"; }; + patches = [ + # fix networkx rename issue of GiGraph.node -> DiGraph.nodes, remove on next bump + ( fetchpatch { + url = "https://github.com/python-streamz/streamz/commit/f8b7bdb6bcb9dd107677e82e755ff4695bf0c4be.patch"; + sha256 = "1b2frp0j369gf55plxk2pigblhsc44m0rm9az01y83cjlcm26x2s"; + }) + # also, fix networkx rename issue of GiGraph.node -> DiGraph.nodes, remove on next bump + ( fetchpatch { + url = "https://github.com/python-streamz/streamz/commit/f7603f4cbea54f1548885881206a3ca9d6e52250.patch"; + sha256 = "1125kqiaz6b3cifz0yk1zrkxj5804lfzl4kc58jhqajv8rsrbs45"; + }) + ]; + propagatedBuildInputs = [ + networkx tornado toolz zict @@ -33,20 +45,21 @@ buildPythonPackage rec { confluent-kafka distributed graphviz - networkx - pytest_4 + pytest requests ]; # Disable test_tcp_async because fails on sandbox build + # disable kafka tests checkPhase = '' pytest --deselect=streamz/tests/test_sources.py::test_tcp_async \ - --deselect=streamz/tests/test_sources.py::test_tcp + --deselect=streamz/tests/test_sources.py::test_tcp \ + --ignore=streamz/tests/test_kafka.py ''; meta = with lib; { description = "Pipelines to manage continuous streams of data"; - homepage = "https://github.com/mrocklin/streamz"; + homepage = "https://github.com/python-streamz/streamz"; license = licenses.bsd3; maintainers = [ maintainers.costrouc ]; }; diff --git a/pkgs/development/python-modules/stups-cli-support/default.nix b/pkgs/development/python-modules/stups-cli-support/default.nix new file mode 100644 index 00000000000..35aaf45ed1a --- /dev/null +++ b/pkgs/development/python-modules/stups-cli-support/default.nix @@ -0,0 +1,43 @@ +{ lib +, fetchFromGitHub +, buildPythonPackage +, clickclick +, dnspython +, requests +, pytest +, pytestcov +, isPy3k +}: + +buildPythonPackage rec { + pname = "stups-cli-support"; + version = "1.1.20"; + disabled = !isPy3k; + + src = fetchFromGitHub { + owner = "zalando-stups"; + repo = "stups-cli-support"; + rev = version; + sha256 = "1r6g29gd009p87m8a6wv4rzx7f0564zdv67qz5xys4wsgvc95bx0"; + }; + + propagatedBuildInputs = [ + clickclick + dnspython + requests + ]; + + preCheck = "export HOME=$TEMPDIR"; + + checkInputs = [ + pytest + pytestcov + ]; + + meta = with lib; { + description = "Helper library for all STUPS command line tools."; + homepage = "https://github.com/zalando-stups/stups-cli-support"; + license = licenses.asl20; + maintainers = [ maintainers.mschuwalow ]; + }; +} diff --git a/pkgs/development/python-modules/stups-tokens/default.nix b/pkgs/development/python-modules/stups-tokens/default.nix new file mode 100644 index 00000000000..3e785d8febb --- /dev/null +++ b/pkgs/development/python-modules/stups-tokens/default.nix @@ -0,0 +1,39 @@ +{ lib +, fetchFromGitHub +, buildPythonPackage +, requests +, mock +, pytest +, pytestcov +, isPy3k +}: + +buildPythonPackage rec { + pname = "stups-tokens"; + version = "1.1.19"; + disabled = !isPy3k; + + src = fetchFromGitHub { + owner = "zalando-stups"; + repo = "python-tokens"; + rev = version; + sha256 = "09z3l3xzdlwpivbi141gk1k0zd9m75mjwbdy81zc386rr9k8s0im"; + }; + + propagatedBuildInputs = [ + requests + ]; + + checkInputs = [ + mock + pytest + pytestcov + ]; + + meta = with lib; { + description = "A Python library that keeps OAuth 2.0 service access tokens in memory for your usage."; + homepage = "https://github.com/zalando-stups/python-tokens"; + license = licenses.asl20; + maintainers = [ maintainers.mschuwalow ]; + }; +} diff --git a/pkgs/development/python-modules/stups-zign/default.nix b/pkgs/development/python-modules/stups-zign/default.nix new file mode 100644 index 00000000000..a4355dd7808 --- /dev/null +++ b/pkgs/development/python-modules/stups-zign/default.nix @@ -0,0 +1,52 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, stups-tokens +, stups-cli-support +, pytest +, pytestcov +, isPy3k +}: + +buildPythonPackage rec { + pname = "stups-zign"; + version = "1.2"; + disabled = !isPy3k; + + src = fetchFromGitHub { + owner = "zalando-stups"; + repo = "zign"; + rev = version; + sha256 = "1vk6pnprnd5lfx96hc2c1n7kwh99f260r730x4y2h7lamlv82fh4"; + }; + + patches = [ + # pytest 5 is currently unsupported. Fetch and apply a pr that resolves this. + (fetchpatch { + url = https://github.com/zalando-stups/zign/commit/50140720211e547b0e59f7ddb39a732f0cc73ad7.patch; + sha256 = "1zmyvg1z1asaqqsmxvsx0srvxd6gkgavppvg3dblxwhkml01awqk"; + }) + ]; + + propagatedBuildInputs = [ + stups-tokens + stups-cli-support + ]; + + preCheck = " + export HOME=$TEMPDIR + "; + + checkInputs = [ + pytest + pytestcov + ]; + + meta = with lib; { + description = "OAuth2 token management command line utility."; + homepage = "https://github.com/zalando-stups/zign"; + license = licenses.asl20; + maintainers = [ maintainers.mschuwalow ]; + }; +} diff --git a/pkgs/development/python-modules/stytra/default.nix b/pkgs/development/python-modules/stytra/default.nix new file mode 100644 index 00000000000..a564798c58a --- /dev/null +++ b/pkgs/development/python-modules/stytra/default.nix @@ -0,0 +1,81 @@ +{ lib, pkgs, buildPythonPackage, fetchPypi, isPy3k, callPackage +, opencv3 +, pyqt5 +, pyqtgraph +, numpy +, scipy +, numba +, pandas +, tables +, git +, ffmpeg +, scikitimage +, matplotlib +, qdarkstyle +, GitPython +, anytree +, pims +, imageio +, imageio-ffmpeg +, av +, nose +, pytest +, pyserial +, arrayqueues +, colorspacious +, qimage2ndarray +, flammkuchen +, lightparam +}: + +buildPythonPackage rec { + pname = "stytra"; + version = "0.8.26"; + disabled = !isPy3k; + + src = fetchPypi { + inherit pname version; + sha256 = "81842a957e3114230c2d628f64325cd89d166913b68c3f802c89282f40918587"; + }; + doCheck = false; + checkInputs = [ + nose + pytest + pyserial + ]; + + + propagatedBuildInputs = [ + opencv3 + pyqt5 + pyqtgraph + numpy + scipy + numba + pandas + tables + git + ffmpeg + scikitimage + matplotlib + qdarkstyle + GitPython + anytree + qimage2ndarray + flammkuchen + pims + colorspacious + lightparam + imageio + imageio-ffmpeg + arrayqueues + av + ]; + + meta = { + homepage = "https://github.com/portugueslab/stytra"; + description = "A modular package to control stimulation and track behaviour"; + license = lib.licenses.gpl3; + maintainers = with lib.maintainers; [ tbenst ]; + }; +} diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/default.nix index 79be6a60c42..cc64e49e1b7 100644 --- a/pkgs/development/python-modules/tensorflow/default.nix +++ b/pkgs/development/python-modules/tensorflow/default.nix @@ -25,6 +25,8 @@ , sse42Support ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") ["westmere" "sandybridge" "ivybridge" "haswell" "broadwell" "skylake" "skylake-avx512"] , avx2Support ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") [ "haswell" "broadwell" "skylake" "skylake-avx512"] , fmaSupport ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") [ "haswell" "broadwell" "skylake" "skylake-avx512"] +# Darwin deps +, Foundation, Security }: assert cudaSupport -> nvidia_x11 != null @@ -157,6 +159,9 @@ let cudatoolkit cudnn nvidia_x11 + ] ++ lib.optionals stdenv.isDarwin [ + Foundation + Security ]; # arbitrarily set to the current latest bazel version, overly careful @@ -326,7 +331,7 @@ let homepage = http://tensorflow.org; license = licenses.asl20; maintainers = with maintainers; [ jyp abbradar ]; - platforms = platforms.linux; + platforms = with platforms; linux ++ darwin; # The py2 build fails due to some issue importing protobuf. Possibly related to the fix in # https://github.com/akesandgren/easybuild-easyblocks/commit/1f2e517ddfd1b00a342c6abb55aef3fd93671a2b broken = !(xlaSupport -> cudaSupport) || !isPy3k; diff --git a/pkgs/development/python-modules/testfixtures/default.nix b/pkgs/development/python-modules/testfixtures/default.nix index caad4940904..8fca654632e 100644 --- a/pkgs/development/python-modules/testfixtures/default.nix +++ b/pkgs/development/python-modules/testfixtures/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "testfixtures"; - version = "6.10.2"; + version = "6.10.3"; src = fetchPypi { inherit pname version; - sha256 = "c0eb9d20ce3b53e0cf543da7c46c263cc9792f13223def8b26edb6180ecdc895"; + sha256 = "8f22100d4fb841b958f64e71c8820a32dc46f57d4d7e077777b932acd87b7327"; }; checkInputs = [ pytest mock sybil zope_component twisted ]; diff --git a/pkgs/development/python-modules/testresources/default.nix b/pkgs/development/python-modules/testresources/default.nix index fa4fc0b1fed..ce00b17b177 100644 --- a/pkgs/development/python-modules/testresources/default.nix +++ b/pkgs/development/python-modules/testresources/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { sha256 = "ee9d1982154a1e212d4e4bac6b610800bfb558e4fb853572a827bc14a96e4417"; }; - buildInputs = [ pbr ]; + propagatedBuildInputs = [ pbr ]; checkInputs = [ fixtures testtools ]; diff --git a/pkgs/development/python-modules/tifffile/default.nix b/pkgs/development/python-modules/tifffile/default.nix index 03ab35e9e19..1fd33c5d7e4 100644 --- a/pkgs/development/python-modules/tifffile/default.nix +++ b/pkgs/development/python-modules/tifffile/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "tifffile"; - version = "2019.7.26"; + version = "2019.7.26.2"; src = fetchPypi { inherit pname version; - sha256 = "82c5c72de4dc19cc7011e4e8c45492e17121bd02cfa98c015ddd2a83e36f09bc"; + sha256 = "2abb91c3a23a61593c5635ac1a19f67e732b46291c305fcee0eeaad41181a13f"; }; patches = lib.optional isPy27 ./python2-regex-compat.patch; diff --git a/pkgs/development/python-modules/tox/default.nix b/pkgs/development/python-modules/tox/default.nix index c24343b4695..87dc5130a9c 100644 --- a/pkgs/development/python-modules/tox/default.nix +++ b/pkgs/development/python-modules/tox/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { pname = "tox"; - version = "3.14.1"; + version = "3.14.2"; buildInputs = [ setuptools_scm ]; propagatedBuildInputs = [ packaging pluggy py six virtualenv toml filelock ]; @@ -22,7 +22,7 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "bcfa3e40abc1e9b70607b56adfd976fe7dc8286ad56aab44e3151daca7d2d0d0"; + sha256 = "7efd010a98339209f3a8292f02909b51c58417bfc6838ab7eca14cf90f96117a"; }; meta = with lib; { diff --git a/pkgs/development/python-modules/tqdm/default.nix b/pkgs/development/python-modules/tqdm/default.nix index e2f34343763..d906b6d51d5 100644 --- a/pkgs/development/python-modules/tqdm/default.nix +++ b/pkgs/development/python-modules/tqdm/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "tqdm"; - version = "4.36.1"; + version = "4.40.2"; src = fetchPypi { inherit pname version; - sha256 = "abc25d0ce2397d070ef07d8c7e706aede7920da163c64997585d42d3537ece3d"; + sha256 = "f0ab01cf3ae5673d18f918700c0165e5fad0f26b5ebe4b34f62ead92686b5340"; }; - buildInputs = [ nose coverage glibcLocales flake8 ]; + checkInputs = [ nose coverage glibcLocales flake8 ]; postPatch = '' # Remove performance testing. diff --git a/pkgs/development/python-modules/transformers/default.nix b/pkgs/development/python-modules/transformers/default.nix new file mode 100644 index 00000000000..09ebf739d7d --- /dev/null +++ b/pkgs/development/python-modules/transformers/default.nix @@ -0,0 +1,41 @@ +{ buildPythonPackage +, stdenv +, fetchFromGitHub +, sacremoses +, requests +, sentencepiece +, boto3 +, tqdm +, regex +, numpy +, pytest +}: + +buildPythonPackage rec { + pname = "transformers"; + version = "2.2.1"; + + src = fetchFromGitHub { + owner = "huggingface"; + repo = pname; + rev = "v${version}"; + sha256 = "1p8p3lhhiyk1xl9gpgq4vbchyz57v3w7hhvsj1r90zs3cckindl8"; + }; + + propagatedBuildInputs = [ numpy sacremoses requests sentencepiece boto3 tqdm regex ]; + + checkInputs = [ pytest ]; + # pretrained tries to download from s3 + checkPhase = '' + cd transformers # avoid importing local files + HOME=$TMPDIR pytest -k 'not pretrained_tokenizers' + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/huggingface/transformers"; + description = "State-of-the-art Natural Language Processing for TensorFlow 2.0 and PyTorch"; + license = licenses.asl20; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ pashashocky ]; + }; +} diff --git a/pkgs/development/python-modules/uamqp/default.nix b/pkgs/development/python-modules/uamqp/default.nix index af1e2dc6de3..b4bbc84f372 100644 --- a/pkgs/development/python-modules/uamqp/default.nix +++ b/pkgs/development/python-modules/uamqp/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "uamqp"; - version = "1.2.3"; + version = "1.2.4"; src = fetchPypi { inherit pname version; - sha256 = "9d15cb12d61a6481f7de412c2d53a99f87650e0d1e5394b047aeee5514964fb8"; + sha256 = "efb53d244bbe336557bad206f9e48159661934baeb0bfe0addfadc1f69796137"; }; buildInputs = [ diff --git a/pkgs/development/python-modules/uranium/default.nix b/pkgs/development/python-modules/uranium/default.nix index 1777a5d1455..a8259451bb0 100644 --- a/pkgs/development/python-modules/uranium/default.nix +++ b/pkgs/development/python-modules/uranium/default.nix @@ -2,7 +2,7 @@ , pyqt5, numpy, scipy, shapely, libarcus, doxygen, gettext, pythonOlder }: buildPythonPackage rec { - version = "4.3.0"; + version = "4.4.0"; pname = "uranium"; format = "other"; @@ -10,7 +10,7 @@ buildPythonPackage rec { owner = "Ultimaker"; repo = "Uranium"; rev = version; - sha256 = "13dk6hkwrzljp1dyb40cyfnfbnl7dvlqsm0ncnmxhwizxr31jb8c"; + sha256 = "1hy7lhn48mfrmfx6mbqxzc6bfh9ndnvcwjlsb6a71mw62xg6w7c2"; }; disabled = pythonOlder "3.5.0"; diff --git a/pkgs/development/python-modules/validators/default.nix b/pkgs/development/python-modules/validators/default.nix index 241dffe7167..5efd676f53d 100644 --- a/pkgs/development/python-modules/validators/default.nix +++ b/pkgs/development/python-modules/validators/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "validators"; - version = "0.14.0"; + version = "0.14.1"; src = fetchPypi { inherit pname version; - sha256 = "1bhla1l8gbks572zp4f254acz23822dz2mp122djxvp328i87b7h"; + sha256 = "0bfe836a1af37bb266d71ec1e98b530c38ce11bc7fbe0c4c96ef7b1532d019e5"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/virtualenv/default.nix b/pkgs/development/python-modules/virtualenv/default.nix index 5d7e2c6b663..cd434bb6e3b 100644 --- a/pkgs/development/python-modules/virtualenv/default.nix +++ b/pkgs/development/python-modules/virtualenv/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "virtualenv"; - version = "16.7.7"; + version = "16.7.8"; src = fetchPypi { inherit pname version; - sha256 = "d257bb3773e48cac60e475a19b608996c73f4d333b3ba2e4e57d5ac6134e0136"; + sha256 = "116655188441670978117d0ebb6451eb6a7526f9ae0796cc0dee6bd7356909b0"; }; # Doubt this is needed - FRidh 2017-07-07 diff --git a/pkgs/development/python-modules/wasabi/default.nix b/pkgs/development/python-modules/wasabi/default.nix index 28912f70471..d50ac4106e6 100644 --- a/pkgs/development/python-modules/wasabi/default.nix +++ b/pkgs/development/python-modules/wasabi/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "wasabi"; - version = "0.4.0"; + version = "0.4.2"; src = fetchPypi { inherit pname version; - sha256 = "0w2jkgrf0x58v8x90v4nifbwcb87pp613vp3sld1fk2avn80imnw"; + sha256 = "9af48b37709000dac34653be376aaac2e3e15392b8c78d0898124c52e083d088"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/weboob/default.nix b/pkgs/development/python-modules/weboob/default.nix index e938cdaa3fb..d0a5d6116f8 100644 --- a/pkgs/development/python-modules/weboob/default.nix +++ b/pkgs/development/python-modules/weboob/default.nix @@ -1,8 +1,24 @@ -{ buildPythonPackage, fetchPypi, stdenv -, nose, pillow, prettytable, pyyaml, dateutil, gdata -, requests, mechanize, feedparser, lxml, gnupg, pyqt5 -, libyaml, simplejson, cssselect, pdfminer -, termcolor, google_api_python_client, html2text +{ lib, buildPythonPackage, fetchPypi, isPy27 +, cssselect +, dateutil +, feedparser +, futures +, gdata +, gnupg +, google_api_python_client +, html2text +, libyaml +, lxml +, mechanize +, nose +, pdfminer +, pillow +, prettytable +, pyqt5 +, pyyaml +, requests +, simplejson +, termcolor , unidecode }: @@ -34,10 +50,27 @@ buildPythonPackage rec { nativeBuildInputs = [ pyqt5 ]; - propagatedBuildInputs = [ pillow prettytable pyyaml dateutil - gdata requests mechanize feedparser lxml gnupg pyqt5 libyaml - simplejson cssselect pdfminer termcolor - google_api_python_client html2text unidecode ]; + propagatedBuildInputs = [ + cssselect + dateutil + feedparser + gdata + gnupg + google_api_python_client + html2text + libyaml + lxml + mechanize + pdfminer + pillow + prettytable + pyqt5 + pyyaml + requests + simplejson + termcolor + unidecode + ] ++ lib.optionals isPy27 [ futures ]; checkPhase = '' nosetests @@ -46,6 +79,6 @@ buildPythonPackage rec { meta = { homepage = http://weboob.org; description = "Collection of applications and APIs to interact with websites without requiring the user to open a browser"; - license = stdenv.lib.licenses.agpl3; + license = lib.licenses.agpl3; }; } diff --git a/pkgs/development/python-modules/xapp/default.nix b/pkgs/development/python-modules/xapp/default.nix new file mode 100644 index 00000000000..440db343025 --- /dev/null +++ b/pkgs/development/python-modules/xapp/default.nix @@ -0,0 +1,43 @@ +{ stdenv +, fetchFromGitHub +, buildPythonPackage +, psutil +, pygobject3 +, gtk3 +, gobject-introspection +, xapps +, polkit +}: + +buildPythonPackage rec { + pname = "xapp"; + version = "1.8.1"; + + src = fetchFromGitHub { + owner = "linuxmint"; + repo = "python-xapp"; + rev = version; + sha256 = "0vw3cn09nx75lv4d9idp5fdhd81xs279zhbyyilynq29cxxs2zil"; + }; + + propagatedBuildInputs = [ + psutil + pygobject3 + gtk3 + gobject-introspection + xapps + polkit + ]; + + postPatch = '' + substituteInPlace "xapp/os.py" --replace "/usr/bin/pkexec" "${polkit}/bin/pkexec" + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/linuxmint/python-xapp"; + description = "Cross-desktop libraries and common resources for python"; + license = licenses.lgpl2; + platforms = platforms.linux; + maintainers = [ maintainers.mkg20001 ]; + }; +} diff --git a/pkgs/development/python-modules/xarray/default.nix b/pkgs/development/python-modules/xarray/default.nix index 58f54aa15b9..c7f0fb1ecf8 100644 --- a/pkgs/development/python-modules/xarray/default.nix +++ b/pkgs/development/python-modules/xarray/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "xarray"; - version = "0.14.0"; + version = "0.14.1"; src = fetchPypi { inherit pname version; - sha256 = "a8b93e1b0af27fa7de199a2d36933f1f5acc9854783646b0f1b37fed9b4da091"; + sha256 = "04b2f4d24707b8871a7ffa37328d0a2de74e81bd30791c9608712612601abd23"; }; checkInputs = [ pytest ]; diff --git a/pkgs/development/python-modules/xattr/default.nix b/pkgs/development/python-modules/xattr/default.nix index c8940b54c46..35c11e90088 100644 --- a/pkgs/development/python-modules/xattr/default.nix +++ b/pkgs/development/python-modules/xattr/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "xattr"; - version = "0.9.6"; + version = "0.9.7"; src = fetchPypi { inherit pname version; - sha256 = "7cb1b28eeab4fe99cc4350e831434142fce658f7d03f173ff7722144e6a47458"; + sha256 = "b0bbca828e04ef2d484a6522ae7b3a7ccad5e43fa1c6f54d78e24bb870f49d44"; }; propagatedBuildInputs = [ cffi ]; diff --git a/pkgs/development/python-modules/yowsup/argparse-dependency.patch b/pkgs/development/python-modules/yowsup/argparse-dependency.patch deleted file mode 100644 index e2b9f0c9a74..00000000000 --- a/pkgs/development/python-modules/yowsup/argparse-dependency.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/setup.py b/setup.py -index 991e89c..7a96ccf 100755 ---- a/setup.py -+++ b/setup.py -@@ -5,7 +5,7 @@ import yowsup - import platform - import sys - --deps = ['python-dateutil', 'argparse', 'python-axolotl>=0.1.39', 'six==1.10'] -+deps = ['python-dateutil', 'python-axolotl>=0.1.39', 'six'] - - if sys.version_info < (2,7): - deps += ['importlib', "protobuf==3.4.0"] diff --git a/pkgs/development/python-modules/yowsup/default.nix b/pkgs/development/python-modules/yowsup/default.nix index 5fa4af18c08..0436fe8a0f0 100644 --- a/pkgs/development/python-modules/yowsup/default.nix +++ b/pkgs/development/python-modules/yowsup/default.nix @@ -1,10 +1,10 @@ { buildPythonPackage, stdenv, fetchFromGitHub, six, python-axolotl, pytest -, isPy3k +, isPy3k, consonance, appdirs }: buildPythonPackage rec { pname = "yowsup"; - version = "2.5.7"; + version = "3.2.3"; # The Python 2.x support of this package is incompatible with `six==1.11`: # https://github.com/tgalal/yowsup/issues/2416#issuecomment-365113486 @@ -14,7 +14,7 @@ buildPythonPackage rec { owner = "tgalal"; repo = "yowsup"; rev = "v${version}"; - sha256 = "1p0hdj5x38v2cxjnhdnqcnp5g7la57mbi365m0z83wa01x2n73w6"; + sha256 = "0wb8yl685nr1i3vx89hwan5m6a482x8g48f5ksvdlph538p720pm"; }; checkInputs = [ pytest ]; @@ -22,9 +22,9 @@ buildPythonPackage rec { HOME=$(mktemp -d) py.test yowsup ''; - patches = [ ./argparse-dependency.patch ]; + patches = [ ./dependency-fixes.patch ]; - propagatedBuildInputs = [ six python-axolotl ]; + propagatedBuildInputs = [ six python-axolotl consonance appdirs ]; meta = with stdenv.lib; { homepage = "https://github.com/tgalal/yowsup"; diff --git a/pkgs/development/python-modules/yowsup/dependency-fixes.patch b/pkgs/development/python-modules/yowsup/dependency-fixes.patch new file mode 100644 index 00000000000..eab56332d49 --- /dev/null +++ b/pkgs/development/python-modules/yowsup/dependency-fixes.patch @@ -0,0 +1,13 @@ +diff --git a/setup.py b/setup.py +index e3871a7..930bd6a 100755 +--- a/setup.py ++++ b/setup.py +@@ -5,7 +5,7 @@ import yowsup + import platform + import sys + +-deps = ['consonance==0.1.2', 'argparse', 'python-axolotl==0.2.2', 'six==1.10', 'appdirs', 'protobuf>=3.6.0'] ++deps = ['consonance>=0.1', 'python-axolotl>=0.2', 'six>=1.10', 'appdirs', 'protobuf>=3.6.0'] + + if sys.version_info < (2, 7): + deps.append('importlib') diff --git a/pkgs/development/python-modules/zha-quirks/default.nix b/pkgs/development/python-modules/zha-quirks/default.nix new file mode 100644 index 00000000000..1f490fea05f --- /dev/null +++ b/pkgs/development/python-modules/zha-quirks/default.nix @@ -0,0 +1,24 @@ +{ stdenv, buildPythonPackage, fetchPypi +, aiohttp, zigpy +, pytest }: + +buildPythonPackage rec { + pname = "zha-quirks"; + version = "0.0.28"; + + nativeBuildInputs = [ pytest ]; + buildInputs = [ aiohttp zigpy ]; + + src = fetchPypi { + inherit pname version; + sha256 = "021z5f5dm74amxkqnz4s1690ydprciqg23jz3n4mpjlxyxbdfj73"; + }; + + meta = with stdenv.lib; { + description = "ZHA Device Handlers are custom quirks implementations for Zigpy"; + homepage = "https://github.com/dmulcahey/zha-device-handlers"; + license = licenses.asl20; + maintainers = with maintainers; [ etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/python-modules/zigpy-deconz/default.nix b/pkgs/development/python-modules/zigpy-deconz/default.nix new file mode 100644 index 00000000000..c9df7824093 --- /dev/null +++ b/pkgs/development/python-modules/zigpy-deconz/default.nix @@ -0,0 +1,25 @@ +{ stdenv, buildPythonPackage, fetchPypi +, aiohttp, crccheck, pyserial, pyserial-asyncio, pycryptodome, zigpy +, pytest }: + +buildPythonPackage rec { + pname = "zigpy-deconz"; + version = "0.7.0"; + + nativeBuildInputs = [ pytest ]; + buildInputs = [ aiohttp crccheck pycryptodome ]; + propagatedBuildInputs = [ pyserial pyserial-asyncio zigpy ]; + + src = fetchPypi { + inherit pname version; + sha256 = "049k6lvgf6yjkinbbzm7gqrzqljk2ky9kfw8n53x8kjyfmfp71i2"; + }; + + meta = with stdenv.lib; { + description = "Library which communicates with Deconz radios for zigpy"; + homepage = "https://github.com/zigpy/zigpy-deconz"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/python-modules/zigpy/default.nix b/pkgs/development/python-modules/zigpy/default.nix new file mode 100644 index 00000000000..726f1fde4e6 --- /dev/null +++ b/pkgs/development/python-modules/zigpy/default.nix @@ -0,0 +1,25 @@ +{ stdenv, buildPythonPackage, fetchPypi +, aiohttp, crccheck, pycryptodome, pycrypto +, pytest, pytest-asyncio, asynctest }: + +buildPythonPackage rec { + pname = "zigpy-homeassistant"; + version = "0.11.0"; + + nativeBuildInputs = [ pytest pytest-asyncio asynctest ]; + buildInputs = [ aiohttp pycryptodome ]; + propagatedBuildInputs = [ crccheck pycrypto ]; + + src = fetchPypi { + inherit pname version; + sha256 = "021wg9yhz8dsif60r8s5621mf63bsayjjb2bimhq0am03ql0fysl"; + }; + + meta = with stdenv.lib; { + description = "Library implementing a ZigBee stack"; + homepage = "https://github.com/zigpy/zigpy"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ etu ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 03a30aad499..a849ec0c026 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -457,7 +457,7 @@ in with self; { M3C = derive2 { name="M3C"; version="1.4.1"; sha256="0l9063bn0sfcq5qxghaj8f98x0pg91fwsd8l64ga8d7pnlm8i5fm"; depends=[cluster dendextend doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer Rtsne sigclust survival]; }; M3D = derive2 { name="M3D"; version="1.16.0"; sha256="0a7xs3kqvyxswsa4zcdakij4rvpv1pr4fmplnvxyskhh2zps7xyl"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; M3Drop = derive2 { name="M3Drop"; version="1.8.1"; sha256="0bzxv4lnmbz4d7y1c2w7i013rfjscnj1ndb05k9n1i4c9gsknqya"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; - MACPET = derive2 { name="MACPET"; version="1.2.0"; sha256="0799d3pr5b6g7xbi75pf693768nspdc73qay72naghyql6g91s96"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; + MACPET = derive2 { name="MACPET"; version="1.2.0"; sha256="0799d3pr5b6g7xbi75pf693768nspdc73qay72naghyql6g91s96"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr rbamtools Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; MADSEQ = derive2 { name="MADSEQ"; version="1.8.0"; sha256="1b7d6niz8lhvd17xjl4hy1yyki049cg6wd3g8wp38bm3zs6dzfd1"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.2.3"; sha256="1d2lllsz2jdqma1ifdg7xj9fby85az7bifn0h0hj705m6dyla42z"; depends=[biomaRt bladderbatch clusterProfiler data_table DOSE ggExtra ggplot2 ggrepel ggsci gridExtra pathview pheatmap png sva]; }; MAIT = derive2 { name="MAIT"; version="1.16.1"; sha256="0fg3cah81c4gzm3hw590h4grrja2qgfs8mrpkbifrgsclbybnp95"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; @@ -538,7 +538,7 @@ in with self; { NADfinder = derive2 { name="NADfinder"; version="1.6.1"; sha256="0kz7dz95kdz5dz05bh7x6czrwdr1imaq1mv6bncxxhv1mffhmb9v"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; NBSplice = derive2 { name="NBSplice"; version="1.0.6"; sha256="1nalcpj7n4qghmkrfq65xd4i0aack2yq4l2wwsy4z0sfi7gh6m49"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; NCIgraph = derive2 { name="NCIgraph"; version="1.30.0"; sha256="16mxxrq6g4szig29cah2a13qp1ybsh8ci37izlq6gpxn0h00maym"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; - NGScopy = derive2 { name="NGScopy"; version="1.16.1"; sha256="1zfasfbzzay402igag1ynffz2v9ad70wdy5vs02q0api3rkkn406"; depends=[changepoint Xmisc]; }; + NGScopy = derive2 { name="NGScopy"; version="1.16.1"; sha256="1zfasfbzzay402igag1ynffz2v9ad70wdy5vs02q0api3rkkn406"; depends=[changepoint rbamtools Xmisc]; }; NOISeq = derive2 { name="NOISeq"; version="2.26.1"; sha256="1wyhhi9ydlbjlz427093mdp5ppby77n37w5c2iyxlpsdk2m2nqsn"; depends=[Biobase Matrix]; }; NTW = derive2 { name="NTW"; version="1.32.0"; sha256="10ndg6mina5wz3w87wpv4mnbxdyj6rhvc9jqf954wmh6gj04vyin"; depends=[mvtnorm]; }; NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.12.0"; sha256="1927ry931ckjrci6yfk3fh774bizh4yb5f7p7x1ra1yxzfizq7k3"; depends=[Biobase matrixStats Rcpp]; }; @@ -1558,7 +1558,7 @@ in with self; { spikeLI = derive2 { name="spikeLI"; version="2.42.0"; sha256="055zbrbh6wf3vvnc9p8px2ffz9wdhdg0h96260r7c72ax3v6wi5g"; depends=[]; }; spkTools = derive2 { name="spkTools"; version="1.38.0"; sha256="0rm2vlzid3wjm1g1kzmjklga1gcf852aznhxb1xr50v8drivkkz9"; depends=[Biobase gtools RColorBrewer]; }; splatter = derive2 { name="splatter"; version="1.6.1"; sha256="1kw9shzqwph44q2fksgp79mrjq23j3806clc4xydw3ys2w4kspj8"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; - spliceSites = derive2 { name="spliceSites"; version="1.30.0"; sha256="1j40awy9irx53d1cdsx52pnxirjrrvgsj9zx5qhl2556ca65l26n"; depends=[Biobase BiocGenerics Biostrings doBy IRanges refGenome seqLogo]; }; + spliceSites = derive2 { name="spliceSites"; version="1.30.0"; sha256="1j40awy9irx53d1cdsx52pnxirjrrvgsj9zx5qhl2556ca65l26n"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; splicegear = derive2 { name="splicegear"; version="1.54.0"; sha256="0phpkgjkc4c8lfr8xsciqyz7imsjpc3sxwsh95glxhrsm7i2mnip"; depends=[annotate Biobase XML]; }; splineTimeR = derive2 { name="splineTimeR"; version="1.10.0"; sha256="15dzhijkhpy7d8hwif59bic83fk6fnyjpp4qi7y7vwq139j6yaj2"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; splots = derive2 { name="splots"; version="1.48.0"; sha256="0s10ha17p4yf6id0h0r0a2fk992jp4ah7v8ani689zy6pcc0w34d"; depends=[RColorBrewer]; }; diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index 1a00fcd4084..8099944156b 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2019-10-04"; }; +let derive2 = derive { snapshot = "2019-12-03"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABACUS = derive2 { name="ABACUS"; version="1.0.0"; sha256="0m1dnkwjr1522l9ddbzzx7ayxvli17sbmk6s28adpmzzjwh2kd1i"; depends=[ggplot2 shiny]; }; @@ -24,7 +24,7 @@ in with self; { ACSNMineR = derive2 { name="ACSNMineR"; version="0.16.8.25"; sha256="0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"; depends=[ggplot2 gridExtra scales]; }; ACSWR = derive2 { name="ACSWR"; version="1.0"; sha256="195vjrkang5cl7gwsna0aq4p0h4jym9xg9yh94bnf8vq6wf8j83n"; depends=[MASS]; }; ACTCD = derive2 { name="ACTCD"; version="1.2-0"; sha256="0mzjxxr2zfdidw8ibh6w8mvpkw3q3nvngqi05g9ind26ckvk053p"; depends=[GDINA R_methodsS3]; }; - ADAPTS = derive2 { name="ADAPTS"; version="0.9.21"; sha256="18cx58rfc2s7lcrc7nhq24564av3wgrsjhc6k62yr7f36474cq1b"; depends=[ComICS DeconRNASeq doParallel e1071 foreach missForest nnls pcaMethods pheatmap preprocessCore quantmod WGCNA]; }; + ADAPTS = derive2 { name="ADAPTS"; version="0.9.26"; sha256="1s0mwascqlyrqfw672cwrkmaviclmhhxibac98brki7r0fxlk3j2"; depends=[ComICS DeconRNASeq doParallel e1071 foreach missForest nnls pcaMethods pheatmap preprocessCore quantmod WGCNA]; }; ADCT = derive2 { name="ADCT"; version="0.1.0"; sha256="1glf83ydx4v3ld8c4gb9h3jk6srd054bis5l8k57p1ba4fnqnnpp"; depends=[mvtnorm]; }; ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; }; ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; }; @@ -34,7 +34,7 @@ in with self; { ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; - AER = derive2 { name="AER"; version="1.2-7"; sha256="14wahf8qwv66rv7wbv53y8rslid140n9n7kcr8nhqw8kcdh5rvis"; depends=[car Formula lmtest sandwich survival zoo]; }; + AER = derive2 { name="AER"; version="1.2-8"; sha256="04qfqv36scl5r5fssz0qzbq64602x8bj02fy1f2gzrmvlf315gh9"; depends=[car Formula lmtest sandwich survival zoo]; }; AF = derive2 { name="AF"; version="0.1.5"; sha256="1r87ra55g0qm2s8cgsmdwck93ia2vr8zfab3in45mxm5xc501xgk"; depends=[data_table drgee ivtools stdReg survival]; }; AFM = derive2 { name="AFM"; version="1.2.6"; sha256="0yngk3j1wkamqzrwibn2csbn61jbdb872n0gi4d3hyhgilqzwbwf"; depends=[data_table dbscan fftwtools fractaldim ggplot2 gridExtra gstat igraph mixtools moments plyr png pracma rgl scales shiny shinyjs sp stringr]; }; AFheritability = derive2 { name="AFheritability"; version="0.1.0"; sha256="03w0a4z2x539ykyzdxm1mfqkhzz03cg0aqvgi062jrrm5m6f57ix"; depends=[ggplot2 mvtnorm reshape2 shiny]; }; @@ -56,6 +56,7 @@ in with self; { ALSCPC = derive2 { name="ALSCPC"; version="1.0"; sha256="0ippxzq5qwb9dnpvm1kxhc0fxh83rs9ny5rcvd30w2bp632q9qdx"; depends=[]; }; ALSM = derive2 { name="ALSM"; version="0.2.0"; sha256="1g7zk8q462j4faq5wzzghkjc003ny6rj8hrymsgvh3fg3a72lvy3"; depends=[car leaps SuppDists]; }; ALTopt = derive2 { name="ALTopt"; version="0.1.1"; sha256="0frpnycnljz6r24cg4z99ivm3rbg9j1nxfkhw18vbrb7gcl1hqj6"; depends=[cubature lattice]; }; + ALassoSurvIC = derive2 { name="ALassoSurvIC"; version="0.1.0"; sha256="0q02rz947bp6i7sbb5nzxq8ky74iprdnpbwnmnn7vg29vhca4b09"; depends=[Rcpp]; }; AMAP_Seq = derive2 { name="AMAP.Seq"; version="1.0"; sha256="0z0rrzps6rm58k4m1ybg77s3w05m5zfya4x8ril78ksxsjwi3636"; depends=[]; }; AMCP = derive2 { name="AMCP"; version="0.0.4"; sha256="051xvnr4zc25w00kh4gkffgigmhmcbqpwh9654jv37glr8ip2v3l"; depends=[]; }; AMCTestmakeR = derive2 { name="AMCTestmakeR"; version="1.0.0"; sha256="1vgncc61gmqhax2a7072jb36bzkycv80xqihkr5qs8jxnqqkndxd"; depends=[]; }; @@ -65,10 +66,11 @@ in with self; { AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-15"; sha256="00zfqcsah2353mrhqkv8bbh24l8gaxk4y78icr9kxy4pqb2988yz"; depends=[]; }; AMPLE = derive2 { name="AMPLE"; version="0.0.2"; sha256="0j19f8rl7gkads4n52l5gfc5k7dx27sswzrypwl7dnxhfp4ivql7"; depends=[dplyr ggplot2 shiny shinyjs tidyr wesanderson]; }; - AMR = derive2 { name="AMR"; version="0.7.1"; sha256="1dgdiaa0xfdgdyaps2mx7xb4zis8rf5npa9cr2lz72nlhh3b0h5h"; depends=[backports crayon data_table dplyr ggplot2 hms knitr microbenchmark rlang scales tidyr]; }; + AMR = derive2 { name="AMR"; version="0.9.0"; sha256="14y7ghqhx3apc2ad4lbjd2swzwgw1qzj0scdgx8jq4b2cv4z2gz6"; depends=[backports cleaner crayon data_table dplyr ggplot2 knitr microbenchmark pillar rlang tidyr]; }; ANN2 = derive2 { name="ANN2"; version="2.3.2"; sha256="0ib6cs2az0hhfg7vj4dk6fxbwjlc305psqjs188fdya2jrxgq1gs"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 testthat viridisLite]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; ANOVA_TFNs = derive2 { name="ANOVA.TFNs"; version="1.0"; sha256="0dwspvxj2gzyvxsd9xyhv47n1hjlqa7z9qza4h3hn1xda12vkjly"; depends=[FuzzyNumbers]; }; + ANOVAIREVA = derive2 { name="ANOVAIREVA"; version="0.1.0"; sha256="04z2g79nnh5yhn4aqw0i7ck2b1z5dbasf1zp1sj6rjjrp9aqmaa6"; depends=[car dplyr ggplot2 plotly rmarkdown shiny]; }; ANOVAShiny = derive2 { name="ANOVAShiny"; version="0.1.0"; sha256="1z8wi8c8j3rlchfk1vx101qz1r9j2jl5lfh72y5lqsisqxl2fyyz"; depends=[DescTools dplyr HH rhandsontable rmarkdown shiny]; }; ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.4"; sha256="0rq4aphjmqrr4pm55vpc8qr4rghqkmlsqsvxzarx3kmr3aqlmqg8"; depends=[quadprog shiny]; }; APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; }; @@ -85,7 +87,7 @@ in with self; { ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; ARHT = derive2 { name="ARHT"; version="0.1.0"; sha256="1fz81a202r8vk655dg6a03zfq3gfkimqjvmc95k3j02xz0iv58kn"; depends=[]; }; ARIbrain = derive2 { name="ARIbrain"; version="0.2"; sha256="18c7yxkrnqh18gcfzvdc5wqig6ywdmjcy8rlz0fdj3b8fb84dfpr"; depends=[hommel plyr RNifti]; }; - AROC = derive2 { name="AROC"; version="1.0"; sha256="1mmcd8nqwzaqghzbcrv0g767j57svzvlzgk71ir61vvjhsk91dkg"; depends=[Hmisc MASS Matrix moments np]; }; + AROC = derive2 { name="AROC"; version="1.0-1"; sha256="086i2isgi65r0sanyisdwiwdca0v7hvi1bcvsmwdbwbcgqr1zh0b"; depends=[Hmisc MASS Matrix moments nor1mix np spatstat]; }; ARPobservation = derive2 { name="ARPobservation"; version="1.2.0"; sha256="1kgflalpymbsfzwg4c70mdxgrbsg8r8z44433v3y9rymhfyq9nmj"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTIVA = derive2 { name="ARTIVA"; version="1.2.3"; sha256="1jdvsslc8parz7wibcv51fx62brl2mc6i482hz43j1npsms2z1hl"; depends=[gplots igraph MASS]; }; @@ -130,7 +132,7 @@ in with self; { AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.67"; sha256="0s8vv960pkbccpwlfsg1jsfjnfmq9iy8cj1fak5fn2s60zb7nm0a"; depends=[MASS mgcv nlme SemiPar]; }; - AdaptGauss = derive2 { name="AdaptGauss"; version="1.5"; sha256="1990nd46ib2wkjhi5ypfyw2wq4gh6y5mymy0s3mq99qy2n17b6zq"; depends=[ggplot2 pracma shiny]; }; + AdaptGauss = derive2 { name="AdaptGauss"; version="1.5.4"; sha256="16p5q5lqq7ys1v4ciiqsp4sw8wlr0w8rjwibr0qgvvdp2wv0lmzd"; depends=[DataVisualizations ggplot2 pracma Rcpp shiny]; }; AdaptiveSparsity = derive2 { name="AdaptiveSparsity"; version="1.6"; sha256="0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"; depends=[MASS Matrix Rcpp RcppArmadillo]; }; AdequacyModel = derive2 { name="AdequacyModel"; version="2.0.0"; sha256="0amp6ic1wylk24sp9wpx3ci38njj7b9qjqfp89j39hkl6kc1q7sq"; depends=[]; }; AdhereR = derive2 { name="AdhereR"; version="0.5"; sha256="0wma06v02k50j0j8j5k1py3y6mwl8q7bsb288gyn67ms9wgv4fb5"; depends=[clipr colourpicker data_table DBI haven highlight knitr lubridate manipulate readODS readxl RMariaDB RSQLite scales shiny shinyjs shinyWidgets V8 viridisLite]; }; @@ -142,14 +144,14 @@ in with self; { AgreementInterval = derive2 { name="AgreementInterval"; version="0.1.1"; sha256="1bvinzylvsaipa8mq15f45b6h37znavlrdl0rbrx1pqw52r7z8kv"; depends=[psych]; }; AhoCorasickTrie = derive2 { name="AhoCorasickTrie"; version="0.1.0"; sha256="0k2lcyxfsavis9g1g5293f0mw7f6jakkr11wkkjvxdlnba9c80r8"; depends=[Rcpp]; }; Ake = derive2 { name="Ake"; version="1.0"; sha256="1dj598xfdyjqvysc39a0d5gizgk367c5lkddmwmsqa8zjmvpr15a"; depends=[]; }; - AlgDesign = derive2 { name="AlgDesign"; version="1.1-7.3"; sha256="0bl7mx4dnmkgs2x1fj7cqnrp7jx18mqwxyga0rzlniq12h8mc3fz"; depends=[]; }; + AlgDesign = derive2 { name="AlgDesign"; version="1.2.0"; sha256="0ammlg148gk0p24fh700116nd66636np0jb1wwh0axq5jphwk1pz"; depends=[]; }; AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; AlphaPart = derive2 { name="AlphaPart"; version="0.7.0"; sha256="1bqwbjqmazjgmdpk5s0i3dl4hb3qhz2sy1drhazmgdxhf5qwsq85"; depends=[directlabels gdata ggplot2 pedigree quadprog Rcpp reshape]; }; - AlphaSimR = derive2 { name="AlphaSimR"; version="0.10.0"; sha256="14fd9d9k88hw7dw2yipbkgxj0aj8mk5ki3kl8v92lm55522nchzz"; depends=[BH R6 Rcpp RcppArmadillo]; }; + AlphaSimR = derive2 { name="AlphaSimR"; version="0.11.0"; sha256="0p3a1rrgd8h02x79g49144igj6g58nnqb6bf7h4cwvjc2033w5si"; depends=[BH R6 Rcpp RcppArmadillo]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; - Amelia = derive2 { name="Amelia"; version="1.7.5"; sha256="1mnvms3bgc5i0v7wdmfx7nikr8wxyzmqi36sj2fz4qv5b0mf4zpa"; depends=[foreign Rcpp RcppArmadillo]; }; + Amelia = derive2 { name="Amelia"; version="1.7.6"; sha256="1shvc8x1kmb0cincgggsv5c5w25k36kqvisdqd3ayy5g98vqvh33"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; AmesHousing = derive2 { name="AmesHousing"; version="0.0.3"; sha256="1fr01ka8x8gdnky6cbd2bjlh1lx71gzq440zsknn9kxvf01s6pxm"; depends=[dplyr magrittr]; }; AmigaFFH = derive2 { name="AmigaFFH"; version="0.3.1"; sha256="0mvw5zr7l29fgm6dan285gjnmmzz59a19v8b2w4j035jzbf1vffw"; depends=[tuneR]; }; @@ -159,14 +161,16 @@ in with self; { AmyloGram = derive2 { name="AmyloGram"; version="1.1"; sha256="1xdi3i3nw4fzj4d040r55f0gid72gy3vbz5nbdrvapl97zk3kp8c"; depends=[biogram ranger seqinr shiny]; }; AnDE = derive2 { name="AnDE"; version="1.0"; sha256="1yil8ab50wvlqmdla9kmfba8vfgy5r694r6igb58s6vnmld78yf2"; depends=[discretization foreign functional stringr]; }; AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.3.0"; sha256="1aps8fnh2d4vw5c9ypmgqnvwqzkjjfrmm7wq4xcy6lmlqks35zdv"; depends=[mvtnorm Rcpp]; }; - AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-20"; sha256="1r2w6wf44p75r5m2hflnk1q71kv4vgds4hxyl5viyl6mg417brg5"; depends=[fastICA R_matlab tkrplot]; }; + AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-21"; sha256="1gn0ixxi42rw8vr4ykl232cmdcc1qqbbivhw3n8f20jgicwg8x06"; depends=[fastICA R_matlab tkrplot]; }; AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.2"; sha256="1nhd0i30g5wb5jh96gfaa0lgnbnj0m2vy4gz7v2c3142396zalnx"; depends=[dplyr ggplot2]; }; + AnimalHabitatNetwork = derive2 { name="AnimalHabitatNetwork"; version="0.1.0"; sha256="1bhqypkiw5v9w26jbdmhndqj5hjfmf7zwivrq2hgs0zcjxwa8gfn"; depends=[ggplot2 igraph]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.2"; sha256="1r52qry6xvn79b6qsbch35jhzg8y71kxqq9xm6gd302cv2xbwq7q"; depends=[ape seqinr]; }; AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; }; AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; + AntMAN = derive2 { name="AntMAN"; version="1.0"; sha256="1dm2fb59r4drbyi21bf48c9r6ajhm507q80syl3xwyqimgbgm8ss"; depends=[mcclust mvtnorm Rcpp RcppArmadillo sdols]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; AnthropMMD = derive2 { name="AnthropMMD"; version="3.0.1"; sha256="0f2j4nwni87r11zav4lvy0c8k9v6yrk2li3vls2xa02nlci64x26"; depends=[plotrix scatterplot3d shiny smacof]; }; Anthropometry = derive2 { name="Anthropometry"; version="1.12"; sha256="1m9ynypl5hyyqqmknd9hgys927bsglhg3l9rydy36l7lk1kf2m9m"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; @@ -181,7 +185,7 @@ in with self; { ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.4"; sha256="1wdr72w0qfh165v5prgxx0py7344v8rw03rhnh7pi5rwd5nyxvhv"; depends=[coda DT ggalt ggplot2 ggthemes hdrcde readr shiny shinythemes toOrdinal]; }; ArfimaMLM = derive2 { name="ArfimaMLM"; version="1.3"; sha256="0s5igf703zzvagsbdxf5yv4gn0vdq51b7fvbc8xkgvlmv91yy372"; depends=[fracdiff fractal lme4]; }; ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; - Arothron = derive2 { name="Arothron"; version="1.0.2"; sha256="1nfdy0gwxm0xw0lp6245zz0ma481yf0yw4giisqpkkkg56snjjmx"; depends=[compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; + Arothron = derive2 { name="Arothron"; version="1.1.0"; sha256="05i49wpzpab1yffxxifjr6iqz8qc1xba7pj9rlnvcmx29f5x8b6w"; depends=[abind alphashape3d compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; AsioHeaders = derive2 { name="AsioHeaders"; version="1.12.1-1"; sha256="0phcagfjxrakkap0kffclcqjspb2rmhq81k934mxgh1qz5a68ksv"; depends=[]; }; AssayCorrector = derive2 { name="AssayCorrector"; version="2.0.0"; sha256="0d2444if5hyfbzyminnspw686r5l4pf9cdj9k48n2539vd61k452"; depends=[kSamples lattice latticeExtra RColorBrewer RVAideMemoire]; }; @@ -190,7 +194,7 @@ in with self; { AssocAFC = derive2 { name="AssocAFC"; version="1.0.2"; sha256="1rjiiir472dnr15xyvpn81s62nf01gl70khr8mrni65ssp5m30fb"; depends=[CompQuadForm]; }; AssocTests = derive2 { name="AssocTests"; version="0.0-4"; sha256="1fhqzbj4aj4srkiba79w8wdyc7yy701izklxqqa7lsifnca6gn4j"; depends=[cluster combinat fExtremes mvtnorm]; }; AssotesteR = derive2 { name="AssotesteR"; version="0.1-10"; sha256="0aysilg79vprcyjirqz6c5s1ry1ia92xik3l38qrw1gf3vfli9cw"; depends=[mvtnorm]; }; - AsyK = derive2 { name="AsyK"; version="0.1.0"; sha256="0m3byaa39m9d8l3pcbjxczvwc395wq5rj55qd7afmnj9a5zhgnaq"; depends=[]; }; + AsyK = derive2 { name="AsyK"; version="1.3.2"; sha256="1ijl4cchbqaa13j3mnrjlg3kpxmqpjbvf48x6p9vvmhiy1n4974w"; depends=[decon ICV kedd kerdiest KernSmooth ks locfit OSCV sm]; }; AsynchLong = derive2 { name="AsynchLong"; version="2.0"; sha256="1wjby75rpypzyrxnv2lgl7h2fsvyni3bpiwclp0x7cl4sxic1x5c"; depends=[]; }; AtelieR = derive2 { name="AtelieR"; version="0.24"; sha256="0yialpmbsbx70gvps4r58xg9wvqcril8j8yd61lkkmz4b3195zai"; depends=[cairoDevice gWidgetsRGtk2 partitions proto]; }; AtmRay = derive2 { name="AtmRay"; version="1.31"; sha256="162078jd032i72sgaar9hqcnn1lh60ajcqpsz4l5ysxfkghcxlh8"; depends=[]; }; @@ -202,14 +206,15 @@ in with self; { AutoStepwiseGLM = derive2 { name="AutoStepwiseGLM"; version="0.2.0"; sha256="0wwi8hg2q1zkf28rq7bj0f9fcxc5hj59hkmk0gl9p8i3rghlyrms"; depends=[caret formula_tools]; }; Autoplotprotein = derive2 { name="Autoplotprotein"; version="1.1"; sha256="13mxqmhhdiq7mz4m6nx39dsq7x3bm8fsgskswx48vsq6x2k6byxa"; depends=[ade4 plotrix plyr seqinr XML]; }; AutoregressionMDE = derive2 { name="AutoregressionMDE"; version="1.0"; sha256="1dmg0q4sp2d2anzhw2my8xjhpyjsx0kf7r202q5bkw8yr57jnhvr"; depends=[]; }; - AzureAuth = derive2 { name="AzureAuth"; version="1.2.2"; sha256="1fsak6f5gkb6vz5iln0m47ss01zmf7wicqm2v5n453v9895fixws"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; - AzureContainers = derive2 { name="AzureContainers"; version="1.1.0"; sha256="0c6xq47k4mggnc7id4xkzc4cznsg8b0aam6iymk587727a6rw1jw"; depends=[AzureAuth AzureGraph AzureRMR httr openssl R6]; }; - AzureGraph = derive2 { name="AzureGraph"; version="1.0.4"; sha256="1bhqgb3msz0yn3xjs8y6wglcyi5s570w5wzq2x0zmfcfyml3pvsa"; depends=[AzureAuth httr jsonlite openssl R6]; }; - AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.1"; sha256="0vchsn7pcsbw6xq1v4qslaysaq1pwirsjmkv2w8skvhbjdxc84km"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; - AzureKusto = derive2 { name="AzureKusto"; version="1.0.3"; sha256="1givy2f54jv9rfri92c8z3z2rg2vbvf079gmb6f4x4wzm21bgd4j"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; - AzureRMR = derive2 { name="AzureRMR"; version="2.2.0"; sha256="1i22c6wjzjhsj1r9nfpq38hfqaqwhjrikxcs01vlzwx5k8w6say9"; depends=[AzureAuth httr jsonlite R6 uuid]; }; - AzureStor = derive2 { name="AzureStor"; version="2.1.1"; sha256="1h94fnjw8myhfxd614mgamvkl8w9476da7rczk4ff5x1jq4z4rg0"; depends=[AzureRMR httr mime openssl R6 xml2]; }; - AzureVM = derive2 { name="AzureVM"; version="2.0.1"; sha256="1da64azk4dmx9bfcxxv34mnsgyxin4c3577zp39f8nfypxk78f9b"; depends=[AzureRMR jsonlite R6]; }; + AzureAuth = derive2 { name="AzureAuth"; version="1.2.3"; sha256="0vi5888qvsmdwvzz46wabg2244liwfzyjd13h1d3wvbarzy7m8wf"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; + AzureCognitive = derive2 { name="AzureCognitive"; version="1.0.0"; sha256="1yg8fq77fbgf21dg9zq7kkgqyx6ax9ma46yv1nhnvdhc3dpvax5a"; depends=[AzureAuth AzureRMR httr jsonlite]; }; + AzureContainers = derive2 { name="AzureContainers"; version="1.1.2"; sha256="0k93zwl090jnkqa255rd0bhkimdnq61iavrfn40122g6hzd52xqk"; depends=[AzureGraph AzureRMR httr openssl R6]; }; + AzureGraph = derive2 { name="AzureGraph"; version="1.1.0"; sha256="0b7bfzvv0115giahs12b0h4qq4fdc5qf5kc8hmvjca6jlgysgvf4"; depends=[AzureAuth httr jsonlite openssl R6]; }; + AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.2"; sha256="1kc16dfmaq825sfyc6ka8rc26qh95a70ljq9sg7xvwm05qm9y10l"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; + AzureKusto = derive2 { name="AzureKusto"; version="1.0.4"; sha256="14gp9qif8p6h7dnw5isls2kvlf77bz3lwr15by2cpa0w5rvzamaj"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; + AzureRMR = derive2 { name="AzureRMR"; version="2.3.0"; sha256="01yj145897v2017asy31rxmkzng7zv1r6avnp2c8vl707cd7afd5"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; + AzureStor = derive2 { name="AzureStor"; version="3.0.0"; sha256="1lxcvgs0gb7ybnqf2ifz5bpc50nn8375g5h6i5jvx6g8ahzppi0d"; depends=[AzureRMR httr mime openssl R6 xml2]; }; + AzureVM = derive2 { name="AzureVM"; version="2.1.0"; sha256="0vb295kcz7j53xhzgsril56b4l8d69jyvkni67bqk8cxxh4qvsgx"; depends=[AzureRMR jsonlite R6]; }; AzureVMmetadata = derive2 { name="AzureVMmetadata"; version="1.0.0"; sha256="0k99ncp9zkyxl0r51041rfgq49gb65f5d3yc89d1gg2aqavk3g2y"; depends=[httr openssl]; }; B2Z = derive2 { name="B2Z"; version="1.4"; sha256="0w7394vs883vb32gs6yhrc1kh5406rs851yb2gs8hqzxad1alvpn"; depends=[coda mvtnorm numDeriv]; }; BACA = derive2 { name="BACA"; version="1.3"; sha256="1vbip7wbzix1s2izbm4058wmwar7w5rv3q8bmj9pm7hcapfi19k0"; depends=[ggplot2 RDAVIDWebService rJava]; }; @@ -217,6 +222,7 @@ in with self; { BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; BAEssd = derive2 { name="BAEssd"; version="1.0.1"; sha256="04wkhcj4wm93hvmfnnzryswaylnxz5qsgnqky9lsx4jqhvg340l6"; depends=[mvtnorm]; }; + BAGofT = derive2 { name="BAGofT"; version="0.1.0"; sha256="1vhi92afvrrj7cvlzszh5ivzkd9bpw2c6rs1p8y0fyyj8k0gl8pa"; depends=[stringr]; }; BALCONY = derive2 { name="BALCONY"; version="0.2.10"; sha256="1wfy0dmwfzd9jp6g92ld8jqzx97grgq4h6dy4y5063vfd9i4slwx"; depends=[Biostrings dplyr progress readr Rpdb scales seqinr]; }; BALD = derive2 { name="BALD"; version="1.0.0-3"; sha256="1azyqami07g3ax60j0ws3d1qha65k0svn2v5c9pisni0qch5xql0"; depends=[lattice logspline rjags]; }; BALLI = derive2 { name="BALLI"; version="0.2.0"; sha256="0qmjwpj56n07dvjwfknqvc02f0y5mlwh2yz4lrw7c4wqgrckcpgi"; depends=[edgeR limma MASS]; }; @@ -233,7 +239,7 @@ in with self; { BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; BAwiR = derive2 { name="BAwiR"; version="1.2"; sha256="0j4vrngfddil4wyaskc0cgqhk496hq7wkrj85hxh76kn85gmfmiv"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; - BB = derive2 { name="BB"; version="2014.10-1"; sha256="1lig3vxhyxy8cnic5bczms8pajmdvwr2ijad1rkdndpglving7x0"; depends=[quadprog]; }; + BB = derive2 { name="BB"; version="2019.10-1"; sha256="0kf9sfsm3n036a8a8gjfpc9qdryvadb019kqjh80n1szdv7bdl04"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; }; BBI = derive2 { name="BBI"; version="0.3.0"; sha256="167sndfp3776p8n9zdpihc9xhqqi8wygzpl49dzkfj53gwa77rnn"; depends=[vegan]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; @@ -252,7 +258,7 @@ in with self; { BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; }; BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; }; BClustLonG = derive2 { name="BClustLonG"; version="0.1.2"; sha256="0w35pwv3y00pmi4qjnzii3q44k7lk13x0cmh1zq3cl42gpi31p7f"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; }; - BDEsize = derive2 { name="BDEsize"; version="1.1"; sha256="0bxfl2hgqwxz97qn21j2gm3lc30h64h41ij6w89rdlad4hkz7vxp"; depends=[fpow ggplot2 shiny shinyalert]; }; + BDEsize = derive2 { name="BDEsize"; version="1.2"; sha256="1b2lms4nmn6gfjmnjq1vq1g3s1ikv7pl4xpbsxfrph14g6awidax"; depends=[fpow ggplot2 shiny shinyalert]; }; BDP2 = derive2 { name="BDP2"; version="0.1.3"; sha256="14m85sigx6hk0qzhfgih43m2lxp9xczmp9g3z4pping6msbnbdrz"; depends=[rmarkdown shiny shinyBS]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; BDgraph = derive2 { name="BDgraph"; version="2.61"; sha256="0xq9zygxs7jli9cw4rsl9ajs6nnl5adfilb47cjdk263909fla5j"; depends=[igraph]; }; @@ -265,20 +271,23 @@ in with self; { BEST = derive2 { name="BEST"; version="0.5.1"; sha256="0yx3bkaaly0lriyd5xr7aay4c381a5iwanfixz9v37cmvs64rs4s"; depends=[coda HDInterval rjags]; }; BESTree = derive2 { name="BESTree"; version="0.5.2"; sha256="0yij6xdlvhbqifckaylgbhszwwp38d9x6vbpr1nl40mwwnv4bswz"; depends=[plyr]; }; BETS = derive2 { name="BETS"; version="0.4.9"; sha256="0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; + BFS = derive2 { name="BFS"; version="0.2.2"; sha256="0if4p0y1yv95c8i0w4gvanzclq0j4pwzscyiq29bfkhcn4izqrmg"; depends=[janitor magrittr progress purrr pxR rvest tibble xml2]; }; + BFpack = derive2 { name="BFpack"; version="0.1.0"; sha256="1sqgn24k5sp928hpqyv0k5bjaz3yc5d7wsl3bkkxixm73w5p7g4j"; depends=[bain lme4 MASS Matrix MCMCpack mvtnorm pracma]; }; BGData = derive2 { name="BGData"; version="2.1.0"; sha256="168lvmcfj9ch2dfp8haykgz8cwmrp1yqn01hbyssqfgpc42lrgf3"; depends=[BEDMatrix bigmemory bit crochet ff LinkedMatrix symDMatrix synchronicity]; }; BGGE = derive2 { name="BGGE"; version="0.6.5"; sha256="1h76c40y45xhf2vp9g0q5j9lfwh16q9axbk5c9aqn4md008xr1j2"; depends=[]; }; BGLR = derive2 { name="BGLR"; version="1.0.8"; sha256="15cv5k44yj5cws9jjd70hvrkm8gzn5x4hfx408n2fbqbv289b5jy"; depends=[truncnorm]; }; BGPhazard = derive2 { name="BGPhazard"; version="1.2.3"; sha256="1yp92y5y3xh0hb1ring6jrma8g4q6210hm9572j8ji1jkafzxjw1"; depends=[survival]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; BH = derive2 { name="BH"; version="1.69.0-1"; sha256="18mckfwxxv8m8rzaz03mg2h6vhaj7y131h6yasfg0s73nxj47zd0"; depends=[]; }; + BHAI = derive2 { name="BHAI"; version="0.99.2"; sha256="1hawa55mk590is8ziav7fdszsa3a42bqb0znzqsazz5lkg4daaa7"; depends=[MCMCpack plotrix prevtoinc]; }; BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.3"; sha256="1cha6bw0zvv30y2hjl1a4d04g1r80dfa7r7zi63q5jjnnbklbswg"; depends=[oro_nifti wavethresh]; }; - BHSBVAR = derive2 { name="BHSBVAR"; version="1.0.4"; sha256="19sqcfg6w6cnk35bxdc0wzizh0slhl684yhjh7zyg1k92dvprfr6"; depends=[Rcpp RcppArmadillo]; }; + BHSBVAR = derive2 { name="BHSBVAR"; version="2.0.0"; sha256="1dgbwzl79ibg8fkin8h2q52jas9mzwn049jjjrsdf2p59mf2g4sn"; depends=[Rcpp RcppArmadillo]; }; BHTSpack = derive2 { name="BHTSpack"; version="0.5"; sha256="1sz99sgxhiajxca5bx2ns9g9qs9ymsvh8i5882nlp7c78qxmqc4g"; depends=[R2HTML xtable]; }; BICORN = derive2 { name="BICORN"; version="0.1.0"; sha256="0mqk8vgp6jdk7f0paa06yqlibkd1y3vs69pg7i9mkvxmda7p4nkq"; depends=[]; }; BIEN = derive2 { name="BIEN"; version="1.2.3"; sha256="0p23kahba55gkk6wx10ii6vrni3b7ia2a4jb64ww4kwp86bknx3d"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; }; BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="3.3-12"; sha256="1kphczvj3rxyjvi93cx2j714scvmmpqv5wrg5pdyy8l891jxsr89"; depends=[miceadds Rcpp RcppArmadillo]; }; - BIGDAWG = derive2 { name="BIGDAWG"; version="2.1"; sha256="0zvy5sl94qi20gdrnxb2lmadfy7p0wqfngjsf6jc2cgwyzk4gnrj"; depends=[haplo_stats httr knitr rmarkdown XML]; }; + BIGDAWG = derive2 { name="BIGDAWG"; version="2.3"; sha256="1lnw31dl161siml6vcp74c30g0rld962ry3am9ljxmd9mw83shnz"; depends=[haplo_stats httr knitr XML]; }; BIGL = derive2 { name="BIGL"; version="1.4.1"; sha256="1n9b5wyzh9nihhrxagdisv06g925aw5ihrszd8iplp8ffvjr5mns"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.2.0"; sha256="0x2s82jql429shk70bhjdy9kamz8dz5ymsxj6kp8ga1711bpwyq6"; depends=[pracma]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; @@ -289,19 +298,19 @@ in with self; { BLCOP = derive2 { name="BLCOP"; version="0.3.1"; sha256="1qfkljw5b1k4b5jd08hw6dsmvgr7vg3kjyib5s13q0mkxvclasym"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; BLModel = derive2 { name="BLModel"; version="1.0.2"; sha256="0l5f2v5ggadmrci3qhhmxm3j9i6jii0anq5rv5vk50y2qzii2q15"; depends=[]; }; BLOQ = derive2 { name="BLOQ"; version="0.1-0"; sha256="1ag0dy3cjdxhlspmzfdnpli030g6gwac50n5s30igcyrmw6kl4hf"; depends=[maxLik mvnmle mvtnorm]; }; - BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.2.9"; sha256="0h578s6zk9pjbb9syzb7649ygwb8a81fdj8krxgcqdknxy0mbi3v"; depends=[Formula mvQuad numDeriv randtoolbox Rcpp RcppArmadillo]; }; + BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.3.0"; sha256="0q01v5xz45adn4zsdfh9s4c8g6rkbllh2y3lga6wgfn0wnhp6nzn"; depends=[Formula Matrix mvQuad numDeriv randtoolbox Rcpp RcppArmadillo]; }; BLR = derive2 { name="BLR"; version="1.5"; sha256="1aj4qs0zjca2ifx3y4a0s6c59lbsgracili2an5nr2rxnsl10aw6"; depends=[SuppDists]; }; BLRPM = derive2 { name="BLRPM"; version="1.0"; sha256="15q0jkw4swz35c58nv23k8g1dy1kkbqh5aydjck7pd0fmppqrhpx"; depends=[R6]; }; BLRShiny = derive2 { name="BLRShiny"; version="0.1.0"; sha256="0z3gr0bvjs7y0jkygh7h9habnk2807cwziajpgfmb7dxdrhccj68"; depends=[caret dplyr e1071 ggplot2 rhandsontable rmarkdown shiny]; }; BLSM = derive2 { name="BLSM"; version="0.1.0"; sha256="02xidwp91rh34rcqd0q552wzm2j80axs1nnwwv2aj04g96lf7myj"; depends=[Rcpp RcppEigen]; }; - BMA = derive2 { name="BMA"; version="3.18.9"; sha256="1lwgjswjiiyzxjpbpr61lcppgkz2d6m3vhgz7qpg33jg2mvdkvjy"; depends=[inline leaps robustbase rrcov survival]; }; + BMA = derive2 { name="BMA"; version="3.18.11"; sha256="13b9agsra9lv00dkmx57zbf6n7xixxlihk7svxaafk8snbyyhk5z"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.3"; sha256="0p1y4yc502r4wjc1vkpa4q9d3xzxnyvp13y910vq5z5nqixjdfsp"; depends=[coda]; }; BMRBr = derive2 { name="BMRBr"; version="0.2.0"; sha256="0v2ysap5jfkq9fc5blqlfhsv2bs8rqybmp5z4q3g6y3y7qzhypjw"; depends=[rvest xml2]; }; BMRSr = derive2 { name="BMRSr"; version="1.0.0"; sha256="0xdzzwmn2ibzgy68djsf7jxayfwd2yr1qsa0dcg9zl4rhl6b8nrl"; depends=[httr readr stringr tibble xml2]; }; BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; }; - BMTME = derive2 { name="BMTME"; version="1.0.11"; sha256="137kh3h4vqqb70crr1h0i3nigy8m7h0lm9kfcv6imqrsfksw42a4"; depends=[BGLR doSNOW dplyr foreach matrixcalc mvtnorm progress Rcpp RcppArmadillo snow tidyr]; }; + BMTME = derive2 { name="BMTME"; version="1.0.12"; sha256="0v1f1c2nk7f51c017jscyzkx7y21b3lmxp46xgs8hqcfjfw9b65m"; depends=[BGLR doSNOW dplyr foreach matrixcalc mvtnorm progress Rcpp RcppArmadillo snow tidyr]; }; BMhyb = derive2 { name="BMhyb"; version="2.1.5"; sha256="0yyvrn5akj132zkxlg5kicj12d7agzmi84jird4aj7hvi88l5wwv"; depends=[ape corpcor cowplot DEoptim geiger ggplot2 igraph lhs MASS Matrix metR mvtnorm numDeriv phytools plyr TreeSim viridis]; }; BMhyd = derive2 { name="BMhyd"; version="1.2-8"; sha256="14pv5f621zq5x9i408zjm8k80hcsabkjpdf86gk3ylgw5yqcivrx"; depends=[ape corpcor geiger mvtnorm numDeriv phylobase phytools TreeSim]; }; BMisc = derive2 { name="BMisc"; version="1.3.1"; sha256="0wh17bf1ii6zan09n59cf9257nb60nh08ig01id9k0bvm9f14ay6"; depends=[formula_tools plm]; }; @@ -312,7 +321,7 @@ in with self; { BNPdensity = derive2 { name="BNPdensity"; version="2019.9.18"; sha256="1s4mifmlvh0b0w4ckllg49z2jwfzy5d2x7lak38r92yg75nabng6"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; BNPmix = derive2 { name="BNPmix"; version="0.2.3"; sha256="1vrblwcrhmkgcgpdlb42lfysgpznaxljiaz6jn2jq7qnsiyqnrmy"; depends=[coda ggplot2 Rcpp RcppArmadillo]; }; BNSL = derive2 { name="BNSL"; version="0.1.4"; sha256="0nrlx55364kgvkdpyaimgjxwnzmmdl1gmvyv3wkm8n2jyki92xxp"; depends=[bnlearn igraph Rcpp]; }; - BNSP = derive2 { name="BNSP"; version="2.1.0"; sha256="01nfzyzd1s55rhc1mghlcqgq6cnp8g44acyfb89vd0w9mdwgj8r0"; depends=[coda corrplot cubature Formula ggplot2 gridExtra mgcv plot3D plyr threejs]; }; + BNSP = derive2 { name="BNSP"; version="2.1.1"; sha256="0bwh7kkga2jh5y79h4dwpxlbxmy2cq4jjy6djikwa8ghhck69c4p"; depends=[coda corrplot cubature Formula ggplot2 gridExtra mgcv plot3D plyr threejs]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; BOIN = derive2 { name="BOIN"; version="2.6.4"; sha256="0p1205pxa5a9sbw88fm8lbvzgzyq3mf62lsp0l2c0sfsvcfpydkg"; depends=[Iso]; }; BPEC = derive2 { name="BPEC"; version="1.3.0"; sha256="0chdp7g75a6hajq7h1lbl0zima22myah9a66m06zga274plakdq2"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools sp]; }; @@ -355,7 +364,7 @@ in with self; { Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.3.1"; sha256="0yhc0wwjqms569gnm8z2l9hgcbw8lyy437ynkij47pa4c1a1qvjy"; depends=[Rcpp RcppArmadillo]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; - BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.5.3"; sha256="11p44iymjgsy9b2yk916sh5f1wv8ma17978ibhckwb4rr0rkcf2i"; depends=[curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; + BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.5.4"; sha256="0a8p9k232ab36xjr5a8rkk19zf8cx8q1pvx54z0xg1dncn28lxwa"; depends=[curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; BatchJobs = derive2 { name="BatchJobs"; version="1.8"; sha256="1zz4sspj596pijxlz321g0jy2rg9ki83j6fihbwisjwr66p2vk1m"; depends=[backports BBmisc brew checkmate data_table DBI digest RSQLite sendmailR stringi]; }; BatchMap = derive2 { name="BatchMap"; version="1.0.2.0"; sha256="0v3k4xrmsbyhzgmph8xna11dgpp10yxqmss95asrj6n814jxj19b"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; BayHap = derive2 { name="BayHap"; version="1.0.1"; sha256="0xqnl2cbf0pyjlpywyy0j4mwknfn8msz4s719dsri3r7hvn9m6kd"; depends=[boa]; }; @@ -363,6 +372,7 @@ in with self; { BayLum = derive2 { name="BayLum"; version="0.1.3"; sha256="0hina84s8ax01zpnji4jqqkdap0phvxr78s4rnab0407xrydbf0w"; depends=[ArchaeoPhases coda hexbin KernSmooth Luminescence rjags]; }; BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; }; BayesBD = derive2 { name="BayesBD"; version="1.2"; sha256="10ik2lndqgmy6pvdm6cx4fsxgjb2fgi6hlz5ic35ab7fkpi90ka5"; depends=[jpeg mritc png Rcpp RcppArmadillo shiny]; }; + BayesBEKK = derive2 { name="BayesBEKK"; version="0.1.0"; sha256="0fykcmf54820krwy7q573gmlcrx96i94knx7rgzc83i287lnpnfg"; depends=[coda MTS mvtnorm]; }; BayesBP = derive2 { name="BayesBP"; version="1.0"; sha256="1gmjljkp4pvm87qf6rq2kixqdx64sfg34b1xxdl242a3cckmjc5y"; depends=[iterators openxlsx]; }; BayesBinMix = derive2 { name="BayesBinMix"; version="1.4.1"; sha256="1b18qg0mjbmrilwqffrq33gw04fzask2xgj1bp4cli51cjf2slf7"; depends=[coda doParallel foreach label_switching]; }; BayesCR = derive2 { name="BayesCR"; version="2.1"; sha256="1qav7l64iqqdvr1v6c7hlzvbx7zbvsa55pyisvkq5rsayy1rdsl1"; depends=[mnormt mvtnorm rootSolve truncdist]; }; @@ -370,7 +380,7 @@ in with self; { BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; BayesDA = derive2 { name="BayesDA"; version="2012.04-1"; sha256="0fp27cmhw8dsxr4mc1flm6qh907476kph8ch2889g9p31xm1psjc"; depends=[]; }; - BayesESS = derive2 { name="BayesESS"; version="0.1.12"; sha256="18dhswny8idj2wqpa66amz1yqk8yhk1vwazj4p70pk8jnpg8cdfy"; depends=[dfcrm LaplacesDemon MASS MatrixModels MCMCpack Rcpp RcppArmadillo RcppEigen]; }; + BayesESS = derive2 { name="BayesESS"; version="0.1.19"; sha256="023r5pxqa2ll3vyfmchdlcg6ay0qixphz24078g1immqp43mlrxm"; depends=[dfcrm LaplacesDemon MASS MatrixModels MCMCpack Rcpp RcppArmadillo RcppEigen]; }; BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-4.2"; sha256="1z083v7is21gm0a458jm5ph3xfdm7mh29a6sg2r1njq82f8x3s3g"; depends=[coda gtools hypergeo Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; @@ -382,11 +392,11 @@ in with self; { BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; - BayesNSGP = derive2 { name="BayesNSGP"; version="0.1.0"; sha256="0nms9s5r1vg5irpfj1kz030hwbiqz84hb7zsnc9y3zqg5arp60xk"; depends=[FNN Matrix nimble StatMatch]; }; + BayesNSGP = derive2 { name="BayesNSGP"; version="0.1.1"; sha256="11c83iafhl8yasyy8xwk9wladbj986xpmgc8d3yd9dxkic71flw8"; depends=[FNN Matrix nimble StatMatch]; }; BayesNetBP = derive2 { name="BayesNetBP"; version="1.4.0"; sha256="007anxk76rxwskc7fvbmaw7ihjnwqad0xmiy6iyv68lwrjifvpc2"; depends=[bnlearn doBy fields graph igraph qtl qtlnet RColorBrewer Rgraphviz]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; - BayesPostEst = derive2 { name="BayesPostEst"; version="0.0.1"; sha256="0q57zlfmxssdvsyj9hxngfa5qbfp39mz5cl9b6g7f61rd30szf9w"; depends=[carData caTools coda dplyr ggmcmc ggplot2 ggridges R2jags reshape2 rlang ROCR tidyr]; }; + BayesPostEst = derive2 { name="BayesPostEst"; version="0.1.0"; sha256="07pj4mrwnlimwrv876x1wcyi1yddd5m074lx7vp3q39qjkphcgk1"; depends=[carData caTools coda dplyr ggmcmc ggplot2 ggridges R2jags reshape2 rlang runjags texreg tidyr]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; BayesS5 = derive2 { name="BayesS5"; version="1.31"; sha256="1azxn3r0s52zy6y5qsa6yx331795mkk7fb28fcinv2zx9iyvk33w"; depends=[abind Matrix snowfall]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-2"; sha256="1xbx9hr254agpcqs1fl7qi7h19fd2bbmjszn44l566n2svgvxwf5"; depends=[coda Formula lattice]; }; @@ -401,7 +411,7 @@ in with self; { BayesX = derive2 { name="BayesX"; version="0.3-1"; sha256="0g4cdkvicqzg75qgr62j89dc9mni38ai7705j6jbfx59vn6dbrr5"; depends=[coda colorspace maptools shapefiles sp]; }; BayesXsrc = derive2 { name="BayesXsrc"; version="3.0-1"; sha256="0l8c6xsyqj09m722hdanr1d9n6a1ps77ybm1jaqmp86bqmq1br03"; depends=[]; }; BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; - BayesianFROC = derive2 { name="BayesianFROC"; version="0.1.5"; sha256="11dpha68vh68ifxk721p3jiklaaavzq06cs12ph95lakrlbv9mr8"; depends=[bridgesampling car crayon DiagrammeR ggplot2 knitr pracma Rcpp readxl rhandsontable rstan shiny shinydashboard xlsx]; }; + BayesianFROC = derive2 { name="BayesianFROC"; version="0.2.0"; sha256="08105wivfycdq2hxs2lfwdl5jqmrfa2psdkjbw753as3fc0jpwrf"; depends=[bridgesampling car crayon DiagrammeR ggplot2 knitr pracma Rcpp readxl rhandsontable rstan shiny shinydashboard shinythemes xlsx]; }; BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; }; BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.5"; sha256="0vnnxzxz68dkfwr9wif8lam3a4khgbslbf49xkygqm8n1swysx2x"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard shinytest shinyWidgets testthat]; }; BayesianPower = derive2 { name="BayesianPower"; version="0.1.6"; sha256="1n41blyqmjq2zdhbz8srsx32piyg26fwgzfphhka12ybk93b2d2h"; depends=[]; }; @@ -414,12 +424,12 @@ in with self; { BeSS = derive2 { name="BeSS"; version="1.0.6"; sha256="018gwcxhpmrblqh389krcpvxwrzl6fg25fg3mqrdvkalyx9xja5w"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.27"; sha256="0y31l3ddxm16sylw7p6dnv39w9ydjkjn92gi0za7s0vx07mzimxp"; depends=[lpSolveAPI ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; - Bergm = derive2 { name="Bergm"; version="5.0.0"; sha256="0l04hg5rwgi5vgb7h987f0j3shb0vz9w26zmk4hm7vfbwb9xxix6"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network]; }; + Bergm = derive2 { name="Bergm"; version="5.0.1"; sha256="1zy2ar43v7pf1ibbhf7visy1ia24lfpa2kb921vxd7hiilky1h8v"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network]; }; Bessel = derive2 { name="Bessel"; version="0.6-0"; sha256="0iwm08nhlivi4zwcqdi296a1l4n4lfanfxhaysh9vcsyk1kpiacf"; depends=[Rmpfr]; }; BetaBit = derive2 { name="BetaBit"; version="1.3"; sha256="1x9mfnijgi8726p82d52g2zgmliwsc97v2g96mz9ccz2vqqnwq4w"; depends=[digest]; }; BetaPASS = derive2 { name="BetaPASS"; version="1.1-1"; sha256="17q1bfmijv38zyaj5fxlylf5zmkqry4ca9wm5km6zpksgsg2kjjq"; depends=[betareg ggplot2 pbapply]; }; BeviMed = derive2 { name="BeviMed"; version="5.3"; sha256="01q5pr776ki973bcld20cqpsz9f10bb30vj95da9gbz5af6bvb14"; depends=[Rcpp]; }; - BeyondBenford = derive2 { name="BeyondBenford"; version="1.1"; sha256="1mqrzd6hpfsqxwm2sgc2lmgx7czvaj7qvhs05pj6p63n0fiimq9c"; depends=[]; }; + BeyondBenford = derive2 { name="BeyondBenford"; version="1.2"; sha256="0319jva0b43xcx7l0jyn0cxkazv7qi05bzmpas8wphk9f8r9jlim"; depends=[ggplot2]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; BiBitR = derive2 { name="BiBitR"; version="0.3.1"; sha256="0wfwph6nw12hb43j14i9ycj8m2zn0m5ynp7afq9cray8rbgvxfv6"; depends=[biclust cluster dendextend foreign lattice randomcoloR viridis]; }; BiDAG = derive2 { name="BiDAG"; version="1.2.0"; sha256="0cn6aasrhqv5vkdb45a1mjzkgcppv1m57cx2bi97riy3siy5h0dy"; depends=[pcalg Rcpp]; }; @@ -429,15 +439,18 @@ in with self; { BiTrinA = derive2 { name="BiTrinA"; version="1.3"; sha256="0sjq5a21vpsjs0ad0v8gsqlbk3n8virg1hzj0nvgm3h3xqhymh1d"; depends=[diptest]; }; BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; }; BibPlots = derive2 { name="BibPlots"; version="0.0.6"; sha256="0gbywbxhqw226mzhxlkl98yky206f9m81wcrp6r4wj8wqhzc2fay"; depends=[]; }; + BifactorIndicesCalculator = derive2 { name="BifactorIndicesCalculator"; version="0.1.0"; sha256="1yawxab606408ribb1mb3aa6a46blv8aqhi9v68cyc0dbd3cjqx8"; depends=[lavaan mirt MplusAutomation tidyr]; }; BigQuic = derive2 { name="BigQuic"; version="1.1-8"; sha256="1kg48jqm62qmz5x0h6fgvd5fs5dvg51x4spsn1q503ag4dqqdjc0"; depends=[Matrix Rcpp scalreg]; }; BigSEM = derive2 { name="BigSEM"; version="0.2"; sha256="091fdibcxd8a8kf9k4pvc1sah830wh179f28gag9g816h4qclnx9"; depends=[MASS parcor]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; - BigVAR = derive2 { name="BigVAR"; version="1.0.4"; sha256="1jyxl9mvzgdj50z7zgg323xx5pnf8d9gn8nsf3jlkp0xgsixap3y"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; + BigVAR = derive2 { name="BigVAR"; version="1.0.6"; sha256="03d5a61clkngq67mkf2pyjj3k633kxp7g37myfplbxi55bdfmdlz"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.9"; sha256="1m1dcj0ryjicaqjlkch7aymsklmvjvn2dvnbssi1cpi54bzn8l7g"; depends=[mclust oompaBase]; }; + BinGSD = derive2 { name="BinGSD"; version="0.0.1"; sha256="0ygr5na7s82xa6vv9f3j6ns5sfhdacyykl1fg422lpkwbss39dnn"; depends=[mvtnorm]; }; BinNonNor = derive2 { name="BinNonNor"; version="1.5.1"; sha256="1afxf0lcdsvw7ky3v25jyl9z9krknvw10ryi2fhgjbydq1nyijl6"; depends=[BB corpcor Matrix mvtnorm]; }; BinNor = derive2 { name="BinNor"; version="2.3.1"; sha256="07f08nn9sbpgddm849rgabka1cb19j3s1yg1c1wydbgfkjakv95x"; depends=[corpcor Matrix mvtnorm psych]; }; BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.5"; sha256="0pw0a4g0v9g5k89hy5jz7hy4f3qg8fwyij6b1lj0b7bpy4mg0kv5"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; BinQuasi = derive2 { name="BinQuasi"; version="0.1-6"; sha256="0jf7zf3yqr2kgcm6h35234x2dqf65d2dzsh63b4q8m5l36r77k59"; depends=[BiocGenerics csaw edgeR GenomicAlignments GenomicRanges IRanges mgcv pracma quadprog RMySQL Rsamtools S4Vectors SummarizedExperiment]; }; + BinSegBstrap = derive2 { name="BinSegBstrap"; version="1.0"; sha256="0iia9sbpnqp07h591d7ifvxq74nvnv0xspka2479qy7il9p65d3r"; depends=[Rcpp]; }; Binarize = derive2 { name="Binarize"; version="1.3"; sha256="0xmgxlfyvgkv7xpngy9am6ihzwbjbfgp7psfnyhb1v0kj9iy7ids"; depends=[diptest]; }; BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; }; BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.3"; sha256="0fydh3pp7y0glk2rhihcslzx10hgn5la922jbnqzg2nplvzv7ybj"; depends=[expm Formula lmtest numDeriv]; }; @@ -449,7 +462,7 @@ in with self; { BioMedR = derive2 { name="BioMedR"; version="1.2.1"; sha256="0l3nmnqv0gzkbby4fhajbba910zpnbyckvxwds353pn54g9pcry7"; depends=[Biostrings ChemmineR fmcsR GOSemSim MASS org_Hs_eg_db pls randomForest rcdk RCurl rjson]; }; BioPET = derive2 { name="BioPET"; version="0.2.2"; sha256="0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioStatR = derive2 { name="BioStatR"; version="3.0.0"; sha256="1fv37xckhpn0b744r71q7h57pr5j2y0v8hcc97cgzdsqd8p4axmk"; depends=[ggplot2]; }; - BiocManager = derive2 { name="BiocManager"; version="1.30.4"; sha256="0kxs76pixk1d2lpvkyrq6nnvv1rqf55ph5f7igkadyyqirf3y2ah"; depends=[]; }; + BiocManager = derive2 { name="BiocManager"; version="1.30.10"; sha256="03n9s2vf7vgpgb5alpxwamf9xfkn32cbzngwyn6spq1bnh9a9dzk"; depends=[]; }; Biocomb = derive2 { name="Biocomb"; version="0.4"; sha256="0jqfac81r5731m0i9jq7v5ns9263p8r7i03jyz10y915kfr6ikh6"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; }; BiodiversityR = derive2 { name="BiodiversityR"; version="2.11-3"; sha256="1ba19vlxpy88xcryf3xki3h49hbmkz9hf69lni6swl2rh1k7fx41"; depends=[Rcmdr rgl vegan vegan3d]; }; @@ -457,11 +470,12 @@ in with self; { Bioi = derive2 { name="Bioi"; version="0.2.9"; sha256="0kvqvvaws1zc3npxvl3jqidak24n5y8n98ml44mkbh7c5n296z2p"; depends=[assertthat dplyr igraph Rcpp]; }; Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; }; Biopeak = derive2 { name="Biopeak"; version="1.0"; sha256="1l08m1jl8yygbdfzk8klpj1q2m7icvxi98vmk7akxs0sswjc6wd2"; depends=[cluster dbscan factoextra gplots RColorBrewer]; }; - Bios2cor = derive2 { name="Bios2cor"; version="1.2"; sha256="00fzvj20x85gcpb9l6rfnm3qml8nnl365z1a68j90qi14wy6dfh6"; depends=[bigmemory bio3d circular igraph]; }; + Bios2cor = derive2 { name="Bios2cor"; version="2.0"; sha256="1rrz0vs6wbkwys3l5jv1rdnlhyb4r1q9pv7jlnmsx6c1b4f4vz5n"; depends=[bigmemory bio3d circular igraph]; }; BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; BisqueRNA = derive2 { name="BisqueRNA"; version="1.0"; sha256="1ks91gjfcnajg540930drcnqcrn4fi3735hywyy3y6i1q0wnq9vb"; depends=[Biobase lsei]; }; BivGeo = derive2 { name="BivGeo"; version="2.0.1"; sha256="1sj52v1zmk425jw9acq9y0jdp3agx103yzf1bjbc5vrmk1x0i0qr"; depends=[]; }; BivRec = derive2 { name="BivRec"; version="1.0.0"; sha256="161856bsny5jq7lmf79w9iqq5kq7c12hkxam5l746rfnrw1bzjzg"; depends=[knitr MASS Rcpp rmarkdown stringr survival]; }; + BivRegBLS = derive2 { name="BivRegBLS"; version="1.1.1"; sha256="1kpl0pwm2g40pxrfbz2d95vcrm51flg6bgc83661349cmc9a2511"; depends=[ellipse]; }; BivUnifBin = derive2 { name="BivUnifBin"; version="1.3.1"; sha256="1ppsayixsbq0f71il93m5ih6gjwf2pavg7dhfj8gm5y8qkiz7pwc"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.2"; sha256="1clfknv56zfi9wgzi5bricchvis83mc33i5d4qk3yzf2ryzxag7q"; depends=[compound_Cox]; }; @@ -472,6 +486,7 @@ in with self; { BlockCov = derive2 { name="BlockCov"; version="0.1.1"; sha256="1ilqd8kvhlq0nc1n4y7g0aiwran3kyqs8i143j6dv2wy3myn5x0l"; depends=[BBmisc dplyr magrittr Matrix Rdpack rlang tibble]; }; BlockFeST = derive2 { name="BlockFeST"; version="1.6"; sha256="0hj7a5as7nxbgjac7lbj6qfwffx3g8x8phpf9a55f1c9cdzi73a5"; depends=[BASIX]; }; BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; }; + BlythStillCasellaCI = derive2 { name="BlythStillCasellaCI"; version="1.0.0"; sha256="0xgrrh6rf732c2dh1z1qyvkqw8ga1yl6i802r399bb7k55g6z6d0"; depends=[]; }; Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; BoSSA = derive2 { name="BoSSA"; version="3.6"; sha256="00jxml2lyw1rc0ifs111sbz30186z61zvz1qy6wz74024c6gsw89"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; }; @@ -482,18 +497,16 @@ in with self; { BondValuation = derive2 { name="BondValuation"; version="0.1.0"; sha256="1sgnf5a6rm1br6i82bmp7s044012bwfxa9yb6bjkq8kr83mf7i6v"; depends=[Rcpp timeDate]; }; BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; }; BoolNet = derive2 { name="BoolNet"; version="2.1.5"; sha256="11fysc39vfk3zb9qklryi8gl42c3hqgzlvci4jj0zkqnm0v9amqk"; depends=[igraph XML]; }; - Boom = derive2 { name="Boom"; version="0.9.2"; sha256="12si4qd3xyx38bryd1s0p2qr1w7w5sxvk6ncpf071v6lxsf7zh05"; depends=[MASS]; }; + Boom = derive2 { name="Boom"; version="0.9.3"; sha256="1mp8vp5fgfirlbgix5vncf05n6b7xyk5giqzxgxnd8g9l4j8r7rd"; depends=[MASS]; }; BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="1.2.1"; sha256="1fxh39rplcnpfyffvzl7kns04lvfc1jx70nsq1380471z1n144lj"; depends=[Boom igraph]; }; BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; - BootValidation = derive2 { name="BootValidation"; version="0.1.65"; sha256="1q42yqj56by3j1kmq17pjl4aq0sznhph65yxfwav39q28bf5y83r"; depends=[glmnet pbapply pROC risksetROC survival]; }; BootWPTOS = derive2 { name="BootWPTOS"; version="1.2"; sha256="1860l11xg7444l3x42rq3636csla23gg0mi5in1zibjwn1ddc202"; depends=[fractal wavethresh]; }; BootstrapQTL = derive2 { name="BootstrapQTL"; version="1.0.2"; sha256="1qf93wmrh6znm81jr3gyn1sl8x4i6pdx811r70fg8k026fbfjn3a"; depends=[data_table foreach MatrixEQTL]; }; Boruta = derive2 { name="Boruta"; version="6.0.0"; sha256="1pp8zal1vhxlzdhl20phn39m3ffhw5glyqbcgwa0w14zw2mpm6hw"; depends=[ranger]; }; BosonSampling = derive2 { name="BosonSampling"; version="0.1.1"; sha256="0wxn12h903a0mlrkrr3w4qd9ld2a4bifs95i98cnl2dsb76rwf12"; depends=[Rcpp RcppArmadillo]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-0"; sha256="13lhs6rynyj9cw13panqbn2jzkhq5fixhfd0ldr128gvw5d43hxg"; depends=[brglm gtools lme4 qvcalc]; }; BradleyTerryScalable = derive2 { name="BradleyTerryScalable"; version="0.1.0"; sha256="0g12fkfs2sykyd6fzf924zv8gj2js452c4pf0pz2p6156chwrk8c"; depends=[dplyr igraph Matrix purrr Rcpp RcppArmadillo]; }; - BrailleR = derive2 { name="BrailleR"; version="0.29.1"; sha256="0n6njampfav84yd68vi4nw8h3dm285m3wfqi048ghiw740sa4rjk"; depends=[devtools dplyr extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest reticulate rmarkdown roloc rolocISCCNBS whisker XML xtable]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.6"; sha256="0lj8s42ndqqllnm8v978481zqmc751v31909rir1pkwcsm3irisx"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-6"; sha256="1m3ajvcksqfck5l5hj5xiflj4ry6d896ybv4f0xxks8chgnwmv0r"; depends=[]; }; @@ -506,7 +519,7 @@ in with self; { BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; - BuyseTest = derive2 { name="BuyseTest"; version="1.7"; sha256="0sjbwacpkw54wwzxd6866dzd03scl5g8ixcxs5ry26b2w0dncy60"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; + BuyseTest = derive2 { name="BuyseTest"; version="1.8"; sha256="1yswhan5gpx4lr49smsj4fkr3f9by11m6fh4dqh793z4bzrc535c"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; C443 = derive2 { name="C443"; version="1.0.0"; sha256="0d04769m9kkjqpj1cgfhqrri893nwi6qn7fz63z5pkym5cig5yyi"; depends=[cluster ggplot2 gridExtra igraph MASS partykit qgraph RColorBrewer reshape2 rpart]; }; C50 = derive2 { name="C50"; version="0.1.2"; sha256="1fpspmsm62h077dkdhii23bs3sxlblabfqj4waz794ihw1b9hicg"; depends=[Cubist partykit]; }; CA3variants = derive2 { name="CA3variants"; version="2.0"; sha256="1wnc9qfcligpsi5ycmzw0igm14h6lvf4vd82aygnas6q41vnypwz"; depends=[ggplot2 ggrepel gridExtra multichull]; }; @@ -514,8 +527,6 @@ in with self; { CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; CAISEr = derive2 { name="CAISEr"; version="1.0.15"; sha256="0igm1yvhllnhqd0bc2z6bfjdmr3w2465xi7vyaa7a68dd5k81apj"; depends=[assertthat ggplot2 gridExtra pbmcapply]; }; CALF = derive2 { name="CALF"; version="0.2.0"; sha256="12w1vr0rk6m4lv6zvqrf45k81d301ln1253wyy9xi6mv1hkabg0v"; depends=[ggplot2]; }; - CALIBERrfimpute = derive2 { name="CALIBERrfimpute"; version="1.0-1"; sha256="1xsnqyj0qdi081rdnpas9ciy9zbhdcjx3lphl6drk0bbmik3znkv"; depends=[mice mvtnorm randomForest]; }; - CAM = derive2 { name="CAM"; version="1.0"; sha256="07mmrz6j8cm6zgaw2zcxgkxb7abd651kb80526r271snjgvpr5bl"; depends=[glmnet Matrix mboost mgcv]; }; CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="1.14.1"; sha256="1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc"; depends=[downloader Hmisc reshape2]; }; CARBayes = derive2 { name="CARBayes"; version="5.1.2"; sha256="0kdjjayvl0rcynpmj82j0xdd6yhfwasabgrrs4nzs8kgjvlqfxax"; depends=[CARBayesdata coda leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; @@ -534,7 +545,7 @@ in with self; { CAinterprTools = derive2 { name="CAinterprTools"; version="1.0.0"; sha256="1ia4qfvj0nzxi6pwqnha2vpfcx3qwaw4vrjqiza11sai274j0pjy"; depends=[ca classInt cluster FactoMineR ggplot2 ggrepel Hmisc RcmdrMisc reshape2]; }; CAvariants = derive2 { name="CAvariants"; version="5.0"; sha256="0y87xg2iwsmn8klavapncd7vkqvl15z9crmx3ja56ksb36czn8kk"; depends=[ggplot2 ggrepel gridExtra]; }; CB2 = derive2 { name="CB2"; version="1.2.1"; sha256="089cf0pcy5xyzr6pl9ljqc52cy2bh2xfxhfh7iika2wv932wwq98"; depends=[dplyr ggplot2 glue magrittr metap pheatmap Rcpp RcppArmadillo stringr tibble tidyr]; }; - CBCgrps = derive2 { name="CBCgrps"; version="2.3"; sha256="07cy8z1fyr328jpa98sdxwd1vydx8sr93jx79hjn9hgm157240mg"; depends=[nortest]; }; + CBCgrps = derive2 { name="CBCgrps"; version="2.4"; sha256="1zqzbvgm82lngaazxm01yqvz4wck0ykva520qlf9bv7chx6jd4rf"; depends=[nortest]; }; CBDA = derive2 { name="CBDA"; version="1.0.0"; sha256="0qm77vvqjgi83i8izly995ziv9ski8kgzqyq4g81i2k7a5dp8vxv"; depends=[doParallel foreach prettydoc SuperLearner]; }; CBPS = derive2 { name="CBPS"; version="0.21"; sha256="0av9lgdn9z57xl9cp53pi9nq971a6fj4przczw7sdb5saml3yr30"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; CBT = derive2 { name="CBT"; version="1.0"; sha256="13h6sf7w03nfq2arqymwww13ywnv9xnqbqazlzn856mj3ggaqda7"; depends=[]; }; @@ -552,7 +563,6 @@ in with self; { CDROM = derive2 { name="CDROM"; version="1.1"; sha256="0mvhqs4m8jp39x1rk31a1sqqmfq1avcnasgh8bizlyxx62igmi1b"; depends=[]; }; CDVine = derive2 { name="CDVine"; version="1.4"; sha256="0cp78pb6yny4n5q2j9k6xdql588536572gbphnw8zkdmrg65qyz7"; depends=[igraph MASS mvtnorm]; }; CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; - CEAmarkov = derive2 { name="CEAmarkov"; version="0.1.0"; sha256="1flninygs01qdvvb7pmllygd8hjssil665rwmgzxrxwh0hz6najk"; depends=[stringr WHO xml2]; }; CEC = derive2 { name="CEC"; version="0.10.2"; sha256="03fxhqlpn7x3djfanlix3yzf1cy6zf854g70gq2d93ix9gis7knv"; depends=[]; }; CEGO = derive2 { name="CEGO"; version="2.3.0"; sha256="005y03bx8acfw3wzriyq3p8d3qvsq1l7xvwgjri67bix052ffn1x"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; CENFA = derive2 { name="CENFA"; version="1.0.0"; sha256="0ah8rh0gbwwhdfxzj9sj4i8iqbybkga09vinlh0r514ayv2qq2x8"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; @@ -560,6 +570,7 @@ in with self; { CFC = derive2 { name="CFC"; version="1.1.2"; sha256="0k0685cgsd0lm7id6h216r4x236xn3nqj4h906qn2i0kvwmx4nda"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; CGE = derive2 { name="CGE"; version="0.1.9"; sha256="1vlv96pwmc1sijrcs3bil9i1wnin013gxjr3dgdj6xakq8sl01sd"; depends=[]; }; CGGP = derive2 { name="CGGP"; version="1.0.1"; sha256="0vpj2bmij8wwckyzbmid6dyzpwy4jcbgpch3j143rag7pvgmc87q"; depends=[Rcpp RcppArmadillo]; }; + CGManalyzer = derive2 { name="CGManalyzer"; version="1.2"; sha256="1993hxpaplb2qxrjfnm63alks0wb3msrffycmwd9p9md5glzci9y"; depends=[]; }; CGP = derive2 { name="CGP"; version="2.1-1"; sha256="05a6gydlb99yk2jpy2hyg4c30hqyp8dg2i9dmbjc1n5cmgpg3im9"; depends=[]; }; CGPfunctions = derive2 { name="CGPfunctions"; version="0.5.7"; sha256="0afyv64kqmjsymnp9vzn55zn8qri2ic4mhsc77rf5s1jzamcgjlp"; depends=[broomExtra car DescTools devtools dplyr ggplot2 ggrepel pwr rlang scales sjstats tibble]; }; CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; }; @@ -577,6 +588,7 @@ in with self; { CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; CJAMP = derive2 { name="CJAMP"; version="0.1.1"; sha256="0caznbqy5hsp7h0gkdbv966vfpq8z1khvbizi4vpc9mxck1nqc99"; depends=[optimx]; }; + CKAT = derive2 { name="CKAT"; version="0.1.0"; sha256="03vxl91z2mhi1h0xgcwhw63mvj56156zgphm16ijdff63pqxaryr"; depends=[CompQuadForm]; }; CKLRT = derive2 { name="CKLRT"; version="0.2.3"; sha256="1d8sg3ncns3fpjaghz1h1z9nfrl31v09xijrzzsias8xjrpi191b"; depends=[MASS mgcv nlme Rcpp RcppEigen]; }; CLA = derive2 { name="CLA"; version="0.95-1"; sha256="0h3b1wmmfhajdgd2nmm1wkrg83fwbwj4yphjqin8yw9a0izqf0mz"; depends=[]; }; CLME = derive2 { name="CLME"; version="2.0-11"; sha256="0p43nnnphzaxrna7y57kgjy2qih535k45s3hxlj89p1x0yhy0mga"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; @@ -587,19 +599,21 @@ in with self; { CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; }; CMLS = derive2 { name="CMLS"; version="1.0-0"; sha256="1542qqsl6sksrcpwhnn55d260hkbmy4ikd0v2an96yxk5w95spvn"; depends=[quadprog]; }; CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; }; + CMShiny = derive2 { name="CMShiny"; version="0.1.0"; sha256="0ciis3930yhn4dmazsg2yp7wi9hdfj5slr032x8qfllxis7m4k0w"; depends=[caret e1071 epitools Matrix rmarkdown shiny shinyMatrix]; }; + CMapViz = derive2 { name="CMapViz"; version="0.1.0"; sha256="1s7xyp13p7fpbq0bghk07dfv90339kxs7k3343jqhrn8djf3as67"; depends=[dplyr ggplot2 readxl reshape2 scales stringr]; }; CMatching = derive2 { name="CMatching"; version="2.3.0"; sha256="0q0hplhsamj46z7g6pa7yg1bap5822ka1419yhcip551djhvnpmv"; depends=[lme4 lmtest Matching multiwayvcov]; }; CMplot = derive2 { name="CMplot"; version="3.4.0"; sha256="1gbgwfxxg8x2bzkd0lvnf14rp3hvlqnw3p42i2jc720zgg1vrxl5"; depends=[]; }; CNLTreg = derive2 { name="CNLTreg"; version="0.1-2"; sha256="07yi0ajil1113663v3gp5d3453r4l9qm442jnpydx4ygvjk7m2ha"; depends=[adlift miscTools nlt]; }; CNLTtsa = derive2 { name="CNLTtsa"; version="0.1-2"; sha256="1vy0jjg6s8yvsvkx4pin183y5bnikm5cmjcpa9znz9dj1w6hwr5r"; depends=[adlift CNLTreg fields nlt]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; - CNVScope = derive2 { name="CNVScope"; version="2.7.2.5"; sha256="13hqgpdjarc9754ac08yw8hza1n1c693l3x9gzd4gz1p1h9yvdm2"; depends=[BiocManager biomaRt blockseg BSgenome_Hsapiens_UCSC_hg19 circlize data_table doParallel dplyr foreach GenomeInfoDb GenomicFeatures GenomicInteractions GenomicRanges ggplot2 heatmaply HiCseg htmltools htmlwidgets igraph InteractionSet IRanges jointseg logging magrittr Matrix matrixStats numbers OpenImageR plotly plyr RCurl reshape2 rslurm rtracklayer S4Vectors shiny shinycssloaders shinyjs shinythemes spatialfil stringr tibble tidyr visNetwork]; }; + CNVScope = derive2 { name="CNVScope"; version="2.8.2"; sha256="08kr9q30cx102wdnm2kqjakjvjp7zfgrqamy1qc87xi7z3w6jkxw"; depends=[BiocManager biomaRt BSgenome_Hsapiens_UCSC_hg19 circlize data_table doParallel dplyr foreach GenomeInfoDb GenomicFeatures GenomicInteractions GenomicRanges ggplot2 heatmaply HiCseg htmltools htmlwidgets igraph InteractionSet IRanges jointseg logging magrittr Matrix matrixStats numbers OpenImageR plotly plyr RCurl reshape2 rslurm rtracklayer S4Vectors shiny shinycssloaders shinyjs shinythemes spatialfil stringr tibble tidyr visNetwork]; }; CNprep = derive2 { name="CNprep"; version="2.0"; sha256="08dpjikx3ldqzw2kwb12q0kbw15qzl09srjdfs0sz9si0x6bfxs6"; depends=[mclust rlecuyer]; }; CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; }; COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; COMBIA = derive2 { name="COMBIA"; version="1.0.6"; sha256="1640bfl5sn00czxnl6j2rrdrzc5arvfpy5b66viybxm2qqbiw49w"; depends=[gdata hash lattice latticeExtra oro_nifti]; }; - COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.6.1"; sha256="1kjjvbp97035qawka1zbypr2gh28xnnsnbplflp3f660ch8rm8m6"; depends=[Rcpp]; }; + COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.7.0"; sha256="144vf3vfn5msc8p67q65frza8xyi9nqccjq47fnv33w5h0d9wlxj"; depends=[Rcpp]; }; CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; @@ -620,8 +634,8 @@ in with self; { CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; }; CRANsearcher = derive2 { name="CRANsearcher"; version="1.0.0"; sha256="09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl"; depends=[curl dplyr DT lubridate miniUI shiny shinyjs stringr]; }; CREAM = derive2 { name="CREAM"; version="1.1.1"; sha256="1lccpwn6c5pmykgf689gvvpqdcilkys4vclpxjhllhanjrfhcs3q"; depends=[]; }; - CRF = derive2 { name="CRF"; version="0.4-2"; sha256="0pgq9xp5qwr221026p5g5qlfwgj9ri1qq8m03pqjxpc6qlr4935l"; depends=[Matrix]; }; - CRFCSD = derive2 { name="CRFCSD"; version="1.0"; sha256="028pqacjg4pb23z976rp6qanx74xs92a4id7875ydvdrgmmi7s14"; depends=[numDeriv orthopolynom Rcpp RcppArmadillo splines2]; }; + CRF = derive2 { name="CRF"; version="0.4-3"; sha256="0jlcc1ffd2z7sz1szbi4vrp5rihmcp18bsw27x02ivi6l21nyivf"; depends=[Matrix]; }; + CRFCSD = derive2 { name="CRFCSD"; version="3.0"; sha256="140g0f5alnd55w9irmbidjlsv3ari8y4qb1m7m28sa30rsnrnzfm"; depends=[numDeriv orthopolynom Rcpp RcppArmadillo splines2]; }; CRM = derive2 { name="CRM"; version="1.2.4"; sha256="0jv2z1y3zyj1m86p4pmqww58hj8pvid1ss6ym67y46n9srzxsmj5"; depends=[]; }; CRPClustering = derive2 { name="CRPClustering"; version="1.2"; sha256="19m7jg6ck2gqmry2p35h3vv8msm4w1x7qwwmm746r646q7w9ylml"; depends=[dplyr lucid MASS mvtnorm png randomcoloR]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; @@ -629,7 +643,7 @@ in with self; { CRWRM = derive2 { name="CRWRM"; version="0.0.1"; sha256="0w6lg5q2c0w5p9vg5qr32pycyl8d1zp0s55jlvf2xhmqx34677hd"; depends=[]; }; CSESA = derive2 { name="CSESA"; version="1.2.0"; sha256="0pv6iabq1w22qbhlsbckdvva4n7igpzrjnrahmq83a6wxgvjbf5j"; depends=[Biostrings]; }; CSFA = derive2 { name="CSFA"; version="1.2.0"; sha256="1nkyhk8qhrrlx8v26yw86l954m4xfcxma4pqbhgw95jvqql5h3li"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; - CSTools = derive2 { name="CSTools"; version="1.0.1"; sha256="1lc5vl6hphhwrlp6pqzhqxcdli1j1i9wmprdi2fhrbmavvb77plv"; depends=[abind data_table ggplot2 maps multiApply ncdf4 plyr rainfarmr reshape2 s2dverification]; }; + CSTools = derive2 { name="CSTools"; version="2.0.0"; sha256="0vczsnbsijvpzzz7vbkgmwr92sk3khazxfw308v7cvbvxwflg4ym"; depends=[abind ClimProjDiags data_table ggplot2 maps multiApply ncdf4 plyr qmap rainfarmr reshape2 s2dverification verification]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; CSeqpat = derive2 { name="CSeqpat"; version="0.1.2"; sha256="1nqk873cagpn4fba4rmyzb6hni1p5lqcvsr9givrcm0gfx756w1h"; depends=[NLP tm]; }; CTAShiny = derive2 { name="CTAShiny"; version="0.1.0"; sha256="18qw8nx1r4gwlxj9zxn4hllpn29fv3i4fgwyl5fh3qsv9hmbvi0x"; depends=[epitools rpivotTable shiny shinyMatrix]; }; @@ -648,7 +662,7 @@ in with self; { CVST = derive2 { name="CVST"; version="0.2-2"; sha256="05l3yzkfrbds09ah9cdwn2sn4ryhq78lz33ryzrgkv176jc8qjw5"; depends=[kernlab Matrix]; }; CVThresh = derive2 { name="CVThresh"; version="1.1.1"; sha256="19d7pslzj8r3z5gn3cplpz2h2ayz6k1nrfx3s2b7a8w1il3vmi69"; depends=[EbayesThresh wavethresh]; }; CVTuningCov = derive2 { name="CVTuningCov"; version="1.0"; sha256="1bwzis82lqwcqp2djy4bnd3vvjr47krlv3pdc5msh12wcs0xhs7n"; depends=[]; }; - CVXR = derive2 { name="CVXR"; version="0.99-6"; sha256="0dirqrjhnbgjvscqqk9vxpiqw3fkd95nd1rclac5i1wyy8dlgn29"; depends=[bit64 ECOSolveR gmp Matrix R_utils R6 Rcpp RcppEigen Rmpfr scs]; }; + CVXR = derive2 { name="CVXR"; version="0.99-7"; sha256="0jbw4gxcjrmzdm2681nfci34mkf16b9w6xi5slq6l5x273rfjh5v"; depends=[bit64 ECOSolveR gmp Matrix R_utils R6 Rcpp RcppEigen Rmpfr scs]; }; CVcalibration = derive2 { name="CVcalibration"; version="1.0-1"; sha256="0ca582fnysrldlzxc3pihsph9pvdgygdh7sfzgxvr5fc3z1jbjzb"; depends=[]; }; CVglasso = derive2 { name="CVglasso"; version="1.0"; sha256="1bh09cd0yabhqv5yfahhvayx3f09yqapzl1yr9nc9xqwyx1d0cfd"; depends=[doParallel dplyr foreach ggplot2 glasso]; }; CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; @@ -676,6 +690,7 @@ in with self; { CautiousLearning = derive2 { name="CautiousLearning"; version="1.0.1"; sha256="1m5x93l4bscrpcxk0pva6d6n2qnzhzxh0a6a81p97l8lqgs1qw2q"; depends=[BH Rcpp sitmo spc]; }; CePa = derive2 { name="CePa"; version="0.6"; sha256="1qpxx9x656g678wp190q29vxkb54sfkalg0csg0ndlcvi03dvl3d"; depends=[graph igraph Rgraphviz]; }; CeRNASeek = derive2 { name="CeRNASeek"; version="2.1"; sha256="007wzq18p8dp7v4dplxsnq3i1qvd740s59nv9ygcr28d6gvsx1fy"; depends=[gtools igraph survival]; }; + CensMFM = derive2 { name="CensMFM"; version="1.5"; sha256="1zdky0rmh27939zka7x0276g5p6wx14hc8206q2z84q3y5mjgahp"; depends=[ggplot2 gridExtra mnormt MomTrunc mvtnorm]; }; CensMixReg = derive2 { name="CensMixReg"; version="3.1"; sha256="1r7w84bjdxnkhiw7gh499scc6m3ba9b2a8cwayn6sg5a524yn9gs"; depends=[ClusterR mixsmsn mnormt mvtnorm trimcluster]; }; CensRegMod = derive2 { name="CensRegMod"; version="1.0"; sha256="0qqwkxn8knhcjb6mph7mp7mma56zxslbvkfgfajq2lq4gbg901y4"; depends=[]; }; CensSpatial = derive2 { name="CensSpatial"; version="1.3"; sha256="0gd1c5qlk71avv0s3jqwb00h9cm6djg9qwzc1znc3kh61wx9kvfi"; depends=[geoR lattice moments msm mvtnorm numDeriv optimx psych raster tmvtnorm]; }; @@ -700,8 +715,8 @@ in with self; { ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; ChocoLattes = derive2 { name="ChocoLattes"; version="0.1.0"; sha256="0ircdar4fswaf34969gzgn83ia891jvwl29jn4s9a87cc4qagzgr"; depends=[ggplot2 knitr plotly R_utils rmarkdown WriteXLS XML]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; - CholWishart = derive2 { name="CholWishart"; version="1.0.1"; sha256="1kzvd9nmkqx3f2n3305h8p3zlh32ql5a94p6p2m5q951x54hivz0"; depends=[]; }; - CircMLE = derive2 { name="CircMLE"; version="0.2.1"; sha256="031pmfyqwif16am7h1csk1dg9vhy0jgdc8w4z60kqqsgf3yk6il9"; depends=[circular]; }; + CholWishart = derive2 { name="CholWishart"; version="1.1.0"; sha256="1p92i5ibv9805fg8s5wrpxx63k4c1ihs1x2zlaz9vbkqypkl8aqz"; depends=[]; }; + CircMLE = derive2 { name="CircMLE"; version="0.2.2"; sha256="0qavd67295ca8jrwllkgjp5b84kxf4pik226pm9y126bz3rss9a1"; depends=[circular]; }; CircNNTSR = derive2 { name="CircNNTSR"; version="2.2"; sha256="0z29dsvcwpra1ny8kj486dpnrak272wmkfnaiyashzcqpnkmkg03"; depends=[]; }; CircOutlier = derive2 { name="CircOutlier"; version="3.2.3"; sha256="1vyac4mjkn6p4p9n5finqqak6g7m3hj04a66v3w797jn1wbd1xly"; depends=[CircStats circular]; }; CircSpaceTime = derive2 { name="CircSpaceTime"; version="0.9.0"; sha256="0dplgm5x4c1xxnv6062n643mn5zh0najw3f41pv2qafc1lil4wx8"; depends=[circular coda ggplot2 Rcpp RcppArmadillo RInside]; }; @@ -726,11 +741,12 @@ in with self; { ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.0.4"; sha256="1819kv0h7qh285nykncdqr808b9v5fviccr0fbv2im7zni497scq"; depends=[climdex_pcic multiApply PCICt plyr]; }; ClinReport = derive2 { name="ClinReport"; version="0.9.1.14"; sha256="140hpg6ybz1rlql06gk851fcvlb2k53kp46dq22cbs36frggk3rj"; depends=[car dplyr emmeans flextable ggplot2 lme4 officer reshape2 xtable]; }; ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="1.1.1"; sha256="0b5by4sn9yvrvxr9921yqsgp8ma3g1hi2qbp5j9m836db1zjhyla"; depends=[Rcpp]; }; + CliquePercolation = derive2 { name="CliquePercolation"; version="0.2.0"; sha256="1zllhl1674734sr0hmfgwdyqlk4rcjdqqrd7rx30llqri478jdff"; depends=[colorspace igraph magrittr Matrix Polychrome qgraph]; }; CloneSeeker = derive2 { name="CloneSeeker"; version="1.0.7"; sha256="07rh577m7xp6v0adchp0mbfs0mkglpv7p27794rm958nvfsmffds"; depends=[combinat gtools quantmod]; }; ClueR = derive2 { name="ClueR"; version="1.4"; sha256="0awl3ag48idg0396hcgqrh5f16mbgximr5xbxjiimib5zysdc558"; depends=[e1071]; }; ClusVis = derive2 { name="ClusVis"; version="1.2.0"; sha256="06yckdl3gxjia1gjjqpc29lvy4f7qf47fncslng9ggjnks6il145"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; ClussCluster = derive2 { name="ClussCluster"; version="0.1.0"; sha256="1436849m2mnm8j7lf653zv8lcvvg2ch8kkks4bvr39kx21wxy8ss"; depends=[ggplot2 reshape2 rlang scales VennDiagram]; }; - ClustBlock = derive2 { name="ClustBlock"; version="2.0.0"; sha256="0g6z4l4ilpamdi8wfmlwz21kjiwlwnl702i38rzlyvysr1afsxv1"; depends=[FactoMineR]; }; + ClustBlock = derive2 { name="ClustBlock"; version="2.1.1"; sha256="0zgrv0bayrfp7hw14zmfl3752l1kjk27lfdgalbx39rgf4pn245g"; depends=[FactoMineR]; }; ClustGeo = derive2 { name="ClustGeo"; version="2.0"; sha256="1p5k2w1k7hnacbazzj2yhxh4z2jngnsl4v5a9b3c8z1dr4nhcwxc"; depends=[sp spdep]; }; ClustImpute = derive2 { name="ClustImpute"; version="0.1.3"; sha256="1rfs8vbpqjskl5ap12x6qmxg4ygaaycaas8x3ylaqvlvyy9ywhki"; depends=[ClusterR copula dplyr magrittr rlang]; }; ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; @@ -738,7 +754,7 @@ in with self; { ClustVarLV = derive2 { name="ClustVarLV"; version="2.0.0"; sha256="03fv3mzmimsmg3d4mlp1j4d1y6qhaaaaml3f6bd8v39h03kd9450"; depends=[doParallel foreach iterators plyr Rcpp RcppEigen]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.2"; sha256="1hh5aah5vnk1ld4hhpslr7hvxhw2b5x55rzxrm6j101sw533706h"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr]; }; ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.0.0"; sha256="0m1lfp27vn3ybwimwkrihff5v2bvdc4c46x8bha8hw0wma14lw5i"; depends=[]; }; - ClusterR = derive2 { name="ClusterR"; version="1.2.0"; sha256="1l5b6n29gslv0xq79xhqd3rniv51bawbrz3qdnjc3677fpgirlx7"; depends=[FD ggplot2 gmp gtools Rcpp RcppArmadillo]; }; + ClusterR = derive2 { name="ClusterR"; version="1.2.1"; sha256="131k4dsh11xx95rhbr9zx20j9y493hiil6gxbgqks8dqp7n895j7"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; @@ -754,7 +770,7 @@ in with self; { Coinprofile = derive2 { name="Coinprofile"; version="0.1.9"; sha256="1bcip62gm34cx5m8a1mx9px2rhgvdmsgnn6q9q40k8p5hw4cx9g0"; depends=[coin exactRankTests ggplot2 plyr Rdpack zoo]; }; CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; }; CollapseLevels = derive2 { name="CollapseLevels"; version="0.2.0"; sha256="1fn5k83lh0vw5j9vhq0x6ksbkrm25acpslav85wfyknsj9vzmzid"; depends=[dplyr ggplot2 lazyeval magrittr]; }; - CollessLike = derive2 { name="CollessLike"; version="1.0"; sha256="080mrvszysdqvx03sd4aczvhs1zmhc6fx8zp5nwrh7mmyajslxkx"; depends=[ape igraph]; }; + CollessLike = derive2 { name="CollessLike"; version="2.0"; sha256="060iqvhyz36s28iyhlr6jj9ah3xd42yaps37kkprajxmyxldk6pp"; depends=[ape igraph]; }; CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; }; ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; }; ComICS = derive2 { name="ComICS"; version="1.0.4"; sha256="0brsb7y1bg23sdpxs4j1y3xdgr1q7iinxnnp17rravw72l991xqa"; depends=[glmnet]; }; @@ -769,7 +785,6 @@ in with self; { CommunityCorrelogram = derive2 { name="CommunityCorrelogram"; version="1.0"; sha256="1wkrm5lil595sc4ih3qsf4sgvfipzlav0n7339ixqw9zxm2pg4nj"; depends=[vegan]; }; Comp2ROC = derive2 { name="Comp2ROC"; version="1.1.4"; sha256="06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d"; depends=[boot ROCR]; }; CompDist = derive2 { name="CompDist"; version="1.0"; sha256="02c18ksk6clv674yh79bzg3mh9hymzhal51j6g0rnvqd5ra8g66c"; depends=[actuar fExtremes numDeriv PearsonDS rmutil VGAM]; }; - CompGLM = derive2 { name="CompGLM"; version="2.0"; sha256="08h91lqafs2af1ms2zmd0v5bg2y9218frk5l6bj3y53791aqd5s2"; depends=[Rcpp]; }; CompLognormal = derive2 { name="CompLognormal"; version="3.0"; sha256="1dhgr9l713l2n889bpa47lbg2qab0fz0r15qa928c0b9nz688ddm"; depends=[numDeriv]; }; CompQuadForm = derive2 { name="CompQuadForm"; version="1.4.3"; sha256="1i30hrqdk64q17vsn918c3q79brchgx2wzh1gbsgbn0dh1ncabq4"; depends=[]; }; CompR = derive2 { name="CompR"; version="1.0"; sha256="1k4q0yanvhdh3ksia7d42lxky19yci5vxhmi6h716g9sxzfsjk6b"; depends=[MASS]; }; @@ -777,13 +792,13 @@ in with self; { CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.2.4"; sha256="108x9a83pbk6xiv1fgzwi0fpbvhpiff7aiplrsq2rfv1isjb5xhq"; depends=[data_table expm Matrix]; }; CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; Compind = derive2 { name="Compind"; version="2.1"; sha256="1cjvpgankifiql67imhxx382q2lz1jq9k0nrwzq560h0xizkak6i"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; - Compositional = derive2 { name="Compositional"; version="3.5"; sha256="00z1z70aahdn09f6fpwphk925zbkbx37vdnz80wi0wz8h2kq9rck"; depends=[doParallel emplik fields foreach MASS mixture Rfast sn]; }; + Compositional = derive2 { name="Compositional"; version="3.6"; sha256="1ngyw7zxvwav65ly6rjqc1zfrgwv3s2a2kyihjf68in6qnqigqxm"; depends=[doParallel emplik foreach MASS mda mixture Rfast Rfast2 sn]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6"; sha256="1kkc4xp5b6q54b76wk4ga28wl668psbpyivl6bnh3xm21276yx5k"; depends=[Rcpp]; }; - ConR = derive2 { name="ConR"; version="1.2.3"; sha256="03i7c4wlg58lwnfh28j5lv9aigvwb7haibcqly3712f0w7a9ixwg"; depends=[doParallel fields foreach geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils tibble writexl]; }; + ConR = derive2 { name="ConR"; version="1.2.4"; sha256="1d36j1q364pakcm8xrbw323pg6dg9brsf6x3hcj1kahcqls9dcff"; depends=[doParallel fields foreach geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils tibble writexl]; }; ConSpline = derive2 { name="ConSpline"; version="1.2"; sha256="16r0v0llj0pri69jqxribp8dpzh6yn6acpq20aaky14fyh3i4q7x"; depends=[coneproj]; }; Conake = derive2 { name="Conake"; version="1.0"; sha256="1rj1rv8r53516jqhwp9xqqwjxh4gx1w47c0bw59f87wiy5pbchpf"; depends=[]; }; - CondIndTests = derive2 { name="CondIndTests"; version="0.1.4"; sha256="0588by7rxrzm2zjigk44snsfv89vkp4fh7y72qm39g57vdz3ykjx"; depends=[caTools kernlab lawstat MASS mgcv quantregForest randomForest RPtests]; }; + CondIndTests = derive2 { name="CondIndTests"; version="0.1.5"; sha256="0km4z8wnj5msg1pmphk2fccbw1cidsxv174817lwcyii9nf5iwsm"; depends=[caTools kernlab lawstat MASS mgcv mize pracma quantregForest randomForest RPtests]; }; CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; ConfIntVariance = derive2 { name="ConfIntVariance"; version="1.0.2"; sha256="0xm3vh3vmf16faa3934100rnrg4rvlqkgjlsqa2smzcvy5vb86z4"; depends=[]; }; ConfigParser = derive2 { name="ConfigParser"; version="1.0.0"; sha256="0jjh6gz5qcqhirzkmg7a4lnf8n3mjly15x2mvbvdpjkk7iv3w9m3"; depends=[ini R6]; }; @@ -795,37 +810,36 @@ in with self; { ConsRank = derive2 { name="ConsRank"; version="2.0.1"; sha256="18f1gqa46f8jrcf2zj4njyy78cl0scjs9k8s9mvg0f9dpr44xnan"; depends=[gtools proxy rgl]; }; ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.4"; sha256="148zpk5a091kxrn6f73k6piwfwbqdmiyd48qinn6cbfma012n13w"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.1"; sha256="00p5bdiq8hj95lkr86iwyh50qw0d0d4gs9hhbzcix6lwn8dwqd3s"; depends=[]; }; - ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="1.4.3"; sha256="0glfnwmfs6xv4d1h5y0859srvj3y68192589mdjcx0jgkgk2c9np"; depends=[lmtest sandwich]; }; + ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="2.2.1"; sha256="0mn0lnycz5pi821q52g1njjs2pcmvv8yynr13bh237c8cashk2n3"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.2"; sha256="1pvcl0bgd4anrbn6wqxsd1s23ycsc7jhrk94yzwx67xx0qs9mmrw"; depends=[lattice tkrplot]; }; CoopGame = derive2 { name="CoopGame"; version="0.2.1"; sha256="1c11b5l6r5csa6zw5a6lfqaygzhnp5jfdf0vkrxpl7fb4bbxhm31"; depends=[geometry gtools rcdd rgl]; }; CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="2.0-11"; sha256="0z1ksim2chwg5acbvav0dzsrnzch1qmbvr2k0dhjmn8lr9rdk4m5"; depends=[dplyr geosphere ggplot2 raster rgbif rgdal rgeos rnaturalearth sp tidyselect]; }; CopCTS = derive2 { name="CopCTS"; version="1.0.0"; sha256="1j0bhkjk181y9k69442diswgwax5whmh5vfqydhf3b1r5ll1wkm3"; depends=[copBasic copula msm]; }; - Copula_Markov = derive2 { name="Copula.Markov"; version="2.4"; sha256="1qzc1clj6i1msqy6405w2vqxsx8hyzhd4zz6cqirv1zl4r2743vv"; depends=[]; }; + Copula_Markov = derive2 { name="Copula.Markov"; version="2.5"; sha256="1jn9lkdkm3i2z3z7v1xqbb3w6szlhng5l16xr2iam39ffl2vn99m"; depends=[]; }; Copula_Markov_survival = derive2 { name="Copula.Markov.survival"; version="0.1.0"; sha256="1r9m96r0mqqjlawhlb9d8d1hf2k2bkal2fmw6g0zabdjb19c75y7"; depends=[survival]; }; Copula_surv = derive2 { name="Copula.surv"; version="1.0"; sha256="1cq12vmsvrxd6anpv6b5jig7x1lf6pj589353h2ba9k0fhkpk51y"; depends=[]; }; CopulaCenR = derive2 { name="CopulaCenR"; version="1.1.2"; sha256="1ksxqgb91vww5q4njidchxwia64g5229dvpxhqhfp8w6hvmib1k1"; depends=[caret copula corpcor flexsurv icenReg magrittr plotly pracma survival]; }; CopulaDTA = derive2 { name="CopulaDTA"; version="1.0.0"; sha256="1bx0jvlbhaxf4yhrfpd5l5zp7kmp6f17ckb1y9974sgc7s3hpqcd"; depends=[ggplot2 plyr reshape2 rstan]; }; CopulaREMADA = derive2 { name="CopulaREMADA"; version="1.3"; sha256="152g8nfa3ksj0dlzlch9a6g18b1vi6dlw748a6m55haghchbyr9l"; depends=[matlab mc2d statmod tensor]; }; CopyDetect = derive2 { name="CopyDetect"; version="1.3"; sha256="1g3bwd805h62x93xvvn67acf9v6vn7s7ghxpvjhwcfdfj7fwzh6l"; depends=[mirt]; }; - CorBin = derive2 { name="CorBin"; version="0.3.1"; sha256="1jkrqy8z54jizbhnjdrhmbvv02kv237rgjpjwnzxcs04q8lqvqjm"; depends=[]; }; + CorBin = derive2 { name="CorBin"; version="0.3.3"; sha256="0jf3d0mbr0vmcqmk5p4rcvc3nc4dn6cqcj8fcqyf32y9vwxd2wii"; depends=[]; }; CorDiff = derive2 { name="CorDiff"; version="1.0"; sha256="12rgfhygrdq1ign4ybr8g171wxic8zbp83n1xdsnqpj910k5jdr5"; depends=[mcc]; }; - Corbi = derive2 { name="Corbi"; version="0.4-4"; sha256="0s56hl2hr73kf8y7syq441wy1b9gjjcnvpgdigcc9g7gi0bkjx35"; depends=[CRF Matrix mpmi]; }; + Corbi = derive2 { name="Corbi"; version="0.5-0"; sha256="05jr0y0qjv2l5ikx8cj10nl16z5yvcjbzdz5gk7lp6kpnmgq3sbw"; depends=[Matrix]; }; CoreGx = derive2 { name="CoreGx"; version="0.1.0"; sha256="1hw7hnd259cspy043js8rv5mb600j3kdhrcq9iva0nmy1qayxdbl"; depends=[Biobase lsa piano rlang]; }; CornerstoneR = derive2 { name="CornerstoneR"; version="1.1.1"; sha256="017j7s3m97sxahgnvk9sm7rfx81cjp1xzsmw7b1aqi7301zjrqa7"; depends=[checkmate data_table ranger vcd]; }; CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.6"; sha256="0iwad5qf7hqii02s5f85155c5s7v8ghnac4l6l3c45dshrpapp2m"; depends=[boot combinat dirmult geepack mvtnorm]; }; - CorrMixed = derive2 { name="CorrMixed"; version="0.1-13"; sha256="02zg5kmv5qxnasnz872r3z7x7dmdcniq1x5xyfnnb3niwkdjgxzx"; depends=[nlme psych]; }; + CorrMixed = derive2 { name="CorrMixed"; version="1.0"; sha256="0rj987k8pzsw9n9a20ky23rwc3zyqsl0fcibpmry7p8pw2miaj0z"; depends=[nlme psych]; }; CorrToolBox = derive2 { name="CorrToolBox"; version="1.6.1"; sha256="1hqbb3raw86g3ww8dmapyy8lac2avs6jbjklfvi9gx06lyw4kv9r"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.17"; sha256="1g7irjbhwnbhk74y3qxcjlrsn2yz8q6wn7ih16wq669nswryxhxk"; depends=[bitops digest XML]; }; CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; }; - Correlplot = derive2 { name="Correlplot"; version="1.0-2"; sha256="0prxnbi7ga5d23i0i4qpynfb3zrsgjxam47km6nsj1prakdkrq7w"; depends=[calibrate xtable]; }; CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; Counterfactual = derive2 { name="Counterfactual"; version="1.1"; sha256="0mz0h5zsmca8fww7nq08m9cld2zbaydn8qad5f2g6vxn382842p9"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; Countr = derive2 { name="Countr"; version="3.5.4"; sha256="10fzmqncbnr47x35xqpsmwzadv9j6r2svisrv8vfpp27mlvp9qwr"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; CountsEPPM = derive2 { name="CountsEPPM"; version="3.0"; sha256="0iw7sfrb4yyaagwm1f4q9av5zvzia1mp2ns287ppsw3k248lz0kb"; depends=[expm Formula lmtest numDeriv]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; - CovTools = derive2 { name="CovTools"; version="0.5.2"; sha256="10qxfl3i7ahx4lv2hpicps56p150v59drrjbx5csb7d8jzc0pj5z"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes SHT]; }; + CovTools = derive2 { name="CovTools"; version="0.5.3"; sha256="0r3q97zl72v7i1d9nhxgsilqczihhfq6zzhl4cmz8rbk3b7c7qrc"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes SHT]; }; CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; }; CoxPhLb = derive2 { name="CoxPhLb"; version="1.2.0"; sha256="0jlh2k5ygj896sfx7dcw5qlb80bl64rsvqfayv0c6a107bmrzsw4"; depends=[survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; @@ -858,12 +872,13 @@ in with self; { DAAGxtras = derive2 { name="DAAGxtras"; version="0.8-4"; sha256="18lg13mbyharidj5j7ncx8s7d72v2hcnqr00vilhf3djk2mjq7xn"; depends=[]; }; DAC = derive2 { name="DAC"; version="0.1.1"; sha256="0abnl70k4c98n29qi64sfd5nch10abw9fknhf2aksyi0qadsiyjq"; depends=[blavaan flexmix sfsmisc truncnorm]; }; DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; }; - DAIME = derive2 { name="DAIME"; version="1.1"; sha256="0kgss7gdwn1fd25arcwai915gm18qm5ffpq4f7qj2pg0lk4hvp0r"; depends=[]; }; + DAFOT = derive2 { name="DAFOT"; version="0.0.1"; sha256="18r5fhb6g0s1viifkkicplzab4aand2lxiwph86w80q80bzpjlpg"; depends=[ape gtools tibble tidytree]; }; + DAIME = derive2 { name="DAIME"; version="2.0"; sha256="02hasr08c8006ypwlia6qlg24div18hka31dasaaaaxvqrf06h2b"; depends=[]; }; DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="0.4.7"; sha256="0iiwkf0pfdb90lf1xhv43qd32z3cjmkmf0ly9841n5lldkjazy3h"; depends=[ggplot2]; }; + DALEX = derive2 { name="DALEX"; version="0.4.9"; sha256="1zviaf7530v8w996lbma0vplabrapgwldi7h70pr0439sxaqd421"; depends=[ggplot2]; }; DALEX2 = derive2 { name="DALEX2"; version="0.9"; sha256="1k39gswksicrb60nx7zzna3mqdm36ckg590iw511ga7frnb8fjl9"; depends=[]; }; - DALEXtra = derive2 { name="DALEXtra"; version="0.1.8"; sha256="17pn8jb1jr9k4ji368didiszp7fi1v8ngffb9sbhcqgn1c0dnmjb"; depends=[DALEX ggplot2 reticulate]; }; + DALEXtra = derive2 { name="DALEXtra"; version="0.2.0"; sha256="1brjc9lybc1sfyk0n6bd44rpapgvi3p60wxw5qaajfcxrxk1286b"; depends=[DALEX ggdendro ggplot2 glmnet gridExtra reticulate]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="1.1"; sha256="07z8mynhqnk1zcvm84w09xzkiy2dfxwhmnpi6gaddr3p0waql4gj"; depends=[ape caper deSolve expm geiger matrixStats picante]; }; DAMisc = derive2 { name="DAMisc"; version="1.5"; sha256="1m418lmzy4sv5hj90j4r4j1bb2q43hxnmpd0mp16010fyr0asbcy"; depends=[AICcmodavg boot car coda effects fANCOVA games gdata lattice latticeExtra MASS nnet optiscale pscl QRM rstan VGAM xtable]; }; @@ -878,14 +893,14 @@ in with self; { DBfit = derive2 { name="DBfit"; version="1.0"; sha256="19jdf693ygwfchlqvh0kywid14v0b53p33rr2dvmaqmsc6pfxbbf"; depends=[Rfit]; }; DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; - DCEM = derive2 { name="DCEM"; version="1.0.0"; sha256="192y07bik0xhs5ja9fmp2ds0qncwpkybarixnak4i35afcky7w7d"; depends=[MASS matrixcalc mvtnorm]; }; + DCEM = derive2 { name="DCEM"; version="2.0.0"; sha256="1jhcqwxcx0my71v1lbspsm78kfqzki1yczvl4r29hqim254qsn5a"; depends=[MASS matrixcalc mvtnorm Rcpp]; }; DCG = derive2 { name="DCG"; version="0.9.3"; sha256="08718x6v3g7kpfv0gpgm19cn3d3ynj7yagzs0jic1j5rwvn04pfb"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; DCM = derive2 { name="DCM"; version="0.1.1"; sha256="191gwfv30hdr789jmdrimcc7aqisz635anydsw2v4s28a3zjbipw"; depends=[gWidgets pander readxl]; }; DCODE = derive2 { name="DCODE"; version="1.0"; sha256="19dwms88q0ylxd92l3ivig8p8jjyhk8mhgz0l36m9pcq11gyjc0n"; depends=[seqinr]; }; DCchoice = derive2 { name="DCchoice"; version="0.0.15"; sha256="1qdqn45ipq0806r25ri4aygzq48k8j5k8rlhi1cafym421yq6bfg"; depends=[Formula interval MASS]; }; - DChaos = derive2 { name="DChaos"; version="0.1-2"; sha256="045zlc9c3cs90dcdrrwwszwrh1n93mdkw6q52l3aq1ln7ywrjlgc"; depends=[NeuralNetTools nnet outliers pracma sandwich xts zoo]; }; + DChaos = derive2 { name="DChaos"; version="0.1-3"; sha256="12qi8m2rvd5r8clmi44hiwpnr6zf1sjw35wvbvm4nz3431xwf4ng"; depends=[entropy NeuralNetTools nnet outliers pracma sandwich xts zoo]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; DClusterm = derive2 { name="DClusterm"; version="1.0-0"; sha256="19ifnj7y3zjp15hd6mafjjqbqqyff17zd0ivnl8bd843nalgfxbb"; depends=[DCluster gridExtra latticeExtra lme4 pscl RColorBrewer sp spacetime xts]; }; DDD = derive2 { name="DDD"; version="4.1"; sha256="09aif9agypw765h148615b6dcjhzw1bvgrzz9dka6n3vk4r1lj5d"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; @@ -914,7 +929,7 @@ in with self; { DGLMExtPois = derive2 { name="DGLMExtPois"; version="0.1.0"; sha256="1c6lys605sggni40792d1xq8ll5nbdc75r92c87grx7zh74sz98m"; depends=[compoisson COMPoissonReg nloptr progress]; }; DGM = derive2 { name="DGM"; version="1.7.2"; sha256="0z0f8bazzsahvjkpfif50db700mqb7arcglwsfxcar9qdy082vsn"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; - DHARMa = derive2 { name="DHARMa"; version="0.2.4"; sha256="0fkzf05p5k22kvicbiizx8aricjkgvkvg2874kmibkycld3qrblq"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qrnn sfsmisc spaMM]; }; + DHARMa = derive2 { name="DHARMa"; version="0.2.6"; sha256="0mv95409lr9psh8ia9llpx8a6861iakrfnw2h96gpi2r9scpr8fj"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qrnn sfsmisc spaMM]; }; DHS_rates = derive2 { name="DHS.rates"; version="0.7.0"; sha256="11rzwwx6vvr66nfklqh6j86k3d0cdccg6l99azwqif0cmj81rdw5"; depends=[crayon haven matrixStats reshape survey]; }; DIFboost = derive2 { name="DIFboost"; version="0.2"; sha256="0wyjk870n18lq0dwhm9ndsh5vv0d8wkrbcky68w454vzrrw1q9h8"; depends=[mboost penalized stabs]; }; DIFlasso = derive2 { name="DIFlasso"; version="1.0-3"; sha256="195wiy0jjkq6bh2b6wrjmr5l34pzx0i2qqvwp4pzv77sx737ds0v"; depends=[grplasso miscTools penalized]; }; @@ -924,7 +939,7 @@ in with self; { DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; DIconvex = derive2 { name="DIconvex"; version="1.0.0"; sha256="0bnrq9nmryshir6ll43nz20aaqmmw0zjvfml72cpwbvrma8a3qmz"; depends=[lpSolveAPI]; }; - DJL = derive2 { name="DJL"; version="3.0"; sha256="1zsr2smgw7p6llyn1ipq8pkr2f8balvvp52x1j713alx6w5g26z7"; depends=[car lpSolveAPI]; }; + DJL = derive2 { name="DJL"; version="3.1"; sha256="1ypkm7fsw7vhd0c2abrmrsa2cmphxqg05j5qlrx3720qsmp5yn2q"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; DLMtool = derive2 { name="DLMtool"; version="5.4.0"; sha256="0412723k06ynm5f8jg8byqdx2v46g060nfbv9c5js8qxn4snz5kc"; depends=[abind boot broom crayon devtools dplyr DT fmsb ggplot2 ggrepel gridExtra kableExtra knitr MASS mvtnorm openxlsx purrr Rcpp RcppArmadillo readxl rfishbase rmarkdown shiny snowfall tidyr]; }; DMMF = derive2 { name="DMMF"; version="0.5.0.2"; sha256="02sk1ykispkjdclsi5xp1m4vmf8mhcqm4q2z73xanvax1kqfb3v3"; depends=[raster rgdal sp]; }; @@ -945,7 +960,8 @@ in with self; { DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; DPP = derive2 { name="DPP"; version="0.1.2"; sha256="1qalcm4gwh03qpy07d0p323ccq8xmk04v6z30g7wg6ic613bqg7m"; depends=[coda Rcpp]; }; - DPQ = derive2 { name="DPQ"; version="0.3-3"; sha256="1s9jlk390cvmk9vvz1lw2qh5j73m3sf663j8ih8fckp0phz1sc3j"; depends=[sfsmisc]; }; + DPQ = derive2 { name="DPQ"; version="0.3-5"; sha256="0952aq9nh18mwldcxdi170i6aqz6snnsvl5g6qm8jq2m1i9jryjw"; depends=[sfsmisc]; }; + DPWeibull = derive2 { name="DPWeibull"; version="1.4"; sha256="024d2b2kdyxv8290a96clazzlq2i14gk9lc63p39iw6lxs1fla9y"; depends=[binaryLogic Rcpp truncdist]; }; DPtree = derive2 { name="DPtree"; version="1.0.1"; sha256="0d7zf695lwkx4gv50f08cbi3p3mjjay0qgrbmvybf9m15i4zmyd7"; depends=[MASS MCMCpack plyr Rdpack]; }; DRAFT = derive2 { name="DRAFT"; version="0.3.0"; sha256="02y644fl5dk3qwvv45vb2zkkp4x1zciickna0pj56myh7ls08hxv"; depends=[coda ggplot2 gridExtra lubridate reshape]; }; DRAYL = derive2 { name="DRAYL"; version="1.0"; sha256="0cf5pyx6nwh8srdylpnmymv3dr67fm6qqpwd1hvj1wmyfc8fznpp"; depends=[cubature pracma RConics rmutil]; }; @@ -963,19 +979,19 @@ in with self; { DSsim = derive2 { name="DSsim"; version="1.1.4"; sha256="0cspyd6msh8aci3w1fv234ca2bwpi6ylkbl45d4k0v3wzzfj20hk"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.9"; sha256="17han4560jv8mmfn4f8adrwh0x25fxz2qwd0sv7vv4iky5and8a7"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; + DT = derive2 { name="DT"; version="0.10"; sha256="0vwhn1mcwv0hkbxnppf6vip23iiib0szvp1h3prawlkvd74xziiw"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; DTAT = derive2 { name="DTAT"; version="0.3-3"; sha256="184b8qkwqlygdqzad2x2qf4hdrpsr7yffmf21jrz5yf946y621wl"; depends=[data_table dplyr Hmisc jsonlite km_ci pomp r2d3 shiny survival]; }; DTAXG = derive2 { name="DTAXG"; version="0.1.0"; sha256="1jxa0ix0z35i0xdnjl698j8iqjmp6nz8ckah9bap5ay9rkq0xd7f"; depends=[]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; }; - DTDA_cif = derive2 { name="DTDA.cif"; version="1.0"; sha256="1gfhcbb5y7yw93f1flpj0p3n62drvck3wi0vswdrzzbbgb0qr2l2"; depends=[doParallel foreach Rcpp]; }; + DTDA_cif = derive2 { name="DTDA.cif"; version="1.0.1"; sha256="1ams5annm0296y6i5ii54cf95i0739269b4p97rib6nniynpwwxk"; depends=[doParallel foreach Rcpp]; }; DTDA_ni = derive2 { name="DTDA.ni"; version="1.0"; sha256="0c45cz4y629bc0jnf3m35ywqkrnjcdqbssbb6m10j8b4gszdi35i"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; DTMCPack = derive2 { name="DTMCPack"; version="0.1-2"; sha256="0bibas5cf06qq834x9q2l2fyh6q9wrg07k8cn6almcyirzax6811"; depends=[]; }; DTR = derive2 { name="DTR"; version="1.7"; sha256="1lzvk9ar6xf3n2vvy8vb9mvrbx3nafzzhvz5g7vf79jd71yz54jd"; depends=[aod ggplot2 survival]; }; DTRlearn2 = derive2 { name="DTRlearn2"; version="1.0"; sha256="0aly8byygpgsjfa1lzarcig2dvz852ihdlw7xhb7kx62y8prjzz1"; depends=[foreach glmnet kernlab MASS Matrix]; }; - DTRreg = derive2 { name="DTRreg"; version="1.4"; sha256="0v2hgq4rgj3ghyi0vzzv1w2a6arg0apps52kki6f6qrvjhh5lh58"; depends=[]; }; - DTSg = derive2 { name="DTSg"; version="0.1.3"; sha256="0dzz6yfq7637rnpk0sjmysj9v7v4f1wcn0g3bfdywnv08kdwbx8j"; depends=[assertive_base assertive_numbers assertive_sets assertive_types data_table R6]; }; + DTRreg = derive2 { name="DTRreg"; version="1.5"; sha256="0milc5bmks6pxhl5f3zyv3w80ld733v05cvx8i531v2ynac4v6zb"; depends=[]; }; + DTSg = derive2 { name="DTSg"; version="0.2.1"; sha256="1j7z89gqcbrxry1pxjd9qwaygrgdsfq0rmg9yiw37ygprhjj7fx0"; depends=[assertive_base assertive_numbers assertive_sets assertive_types data_table R6]; }; DTWBI = derive2 { name="DTWBI"; version="1.1"; sha256="06lp4yc5nhacrgic78l014g2w1ibwgs8dp8zrahk5aripaczl25y"; depends=[dtw e1071 entropy lsa rlist]; }; DTWUMI = derive2 { name="DTWUMI"; version="1.0"; sha256="0pybgbfs2yp2ljbs0kra5z70x3llkiwdngp6cadgs3j9rar4vq4q"; depends=[dtw DTWBI e1071 entropy lsa rlist]; }; DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.9"; sha256="1m13lhxgw7yj44s5spmlb4xxkranfbmjfh8lhrksikd796vxms3s"; depends=[ggplot2 KernSmooth reshape2 shiny]; }; @@ -999,7 +1015,7 @@ in with self; { DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; DataPackageR = derive2 { name="DataPackageR"; version="0.15.7"; sha256="11bra0kgmvag4mp6hpljd8m3r1306cbncmz3x71iybkahimws813"; depends=[assertthat crayon desc devtools digest futile_logger knitr purrr rmarkdown roxygen2 rprojroot stringr usethis yaml]; }; DataSpaceR = derive2 { name="DataSpaceR"; version="0.7.2"; sha256="1m84hp23ksh58x7xfpl684d85rj2whd6cx515s8m8qhrg737fkp4"; depends=[assertthat curl data_table digest httr jsonlite R6 Rlabkey]; }; - DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.8"; sha256="1hzgmqq3rkb1fd8apyjmk6mnb7c9j12xd76pykx2k29rwvlavr65"; depends=[ggplot2 Rcpp RcppArmadillo sp]; }; + DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.9"; sha256="13yrjs37ap8rmx842zp529brfr12rr4d77f2pqlj5wfppngxzv31"; depends=[ggplot2 Rcpp RcppArmadillo sp]; }; DataViz = derive2 { name="DataViz"; version="0.2.8"; sha256="1dr5nvdzc63x9ymlysvv5i8b7zcffq13pa39q0ychdwr1s3x7vzw"; depends=[Rcpp tibble]; }; DatabaseConnector = derive2 { name="DatabaseConnector"; version="2.4.1"; sha256="0f0kybbi47x585rxlgdhcmrn1wr9399pd26692czg4h9qwvnka52"; depends=[bit DatabaseConnectorJars DBI ff ffbase rJava SqlRender urltools]; }; DatabaseConnectorJars = derive2 { name="DatabaseConnectorJars"; version="1.1.0"; sha256="18m6ynj30r5xdy51b3s39h0jcz1k2wgka888skr6ds2233lhqk2w"; depends=[rJava]; }; @@ -1007,7 +1023,8 @@ in with self; { Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; DeLorean = derive2 { name="DeLorean"; version="1.5.0"; sha256="1ry6j4mvxms9hddi9c56p9yhjh66fzss41wqkf6xq398h1wbn4q1"; depends=[BH broom coda dplyr fastICA functional ggplot2 kernlab lattice MASS memoise Rcpp RcppEigen reshape2 rstan rstantools seriation StanHeaders stringr]; }; DeRezende_Ferreira = derive2 { name="DeRezende.Ferreira"; version="0.1.0"; sha256="05c99z3hlwwm0p02cl9z6gjwfxfq2b2qn90l85270bi16llgf42h"; depends=[xts]; }; - DecisionAnalysis = derive2 { name="DecisionAnalysis"; version="0.1.0"; sha256="1pxsvwl1in822ml7spb4flln2l7kzavq0jhxxsgxcrljypvrva61"; depends=[Cairo data_tree dplyr ggplot2 gridExtra tidyr viridisLite]; }; + DealGPL570 = derive2 { name="DealGPL570"; version="0.0.1"; sha256="0q7mcgbwqd22mmcnilqi30cibk2pv25ks1yks0h3m3vd3aci4vqf"; depends=[affy dplyr GEOquery stringr tibble]; }; + DecisionAnalysis = derive2 { name="DecisionAnalysis"; version="1.0.0"; sha256="1d0b534s9fidgl5q8q8g5s58v6wv3md4pl5zm5r5q3jlr6z8q5n3"; depends=[Cairo data_tree DiagrammeR dplyr ggplot2 gridExtra tidyr viridisLite]; }; DeclareDesign = derive2 { name="DeclareDesign"; version="0.20.0"; sha256="0zdpiwh74ljc57s4cgak2j8zg3zyz9f3b47dambw2zdiy0db6wk8"; depends=[estimatr fabricatr generics randomizr rlang]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; @@ -1029,15 +1046,14 @@ in with self; { DepLogo = derive2 { name="DepLogo"; version="1.0"; sha256="0h4jpflf8amip62r936lg0k428gypag296kwl58w1d0qa5jyxrkk"; depends=[]; }; DepthProc = derive2 { name="DepthProc"; version="2.1.1"; sha256="059hqqjxaa6k65k6snbxvq4kpcqigri86v909kgw9vxq0jmb5pl7"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; Deriv = derive2 { name="Deriv"; version="3.9.0"; sha256="0hlqm216bg3l79gq6m0am0xz6vd3l2hgjnjm6lym3mkmgkka4kxw"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.29"; sha256="0ii6vimqav45qmv72pj6jxwjjphdf930c9abq3zaa39dhmdcf6ji"; depends=[BH boot expm MASS mvtnorm Rcpp]; }; - DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.4"; sha256="082xgva4avw3ymv9d38mhxj5dnpsyikkb2869ldfw4r1px3sqlbc"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; + DescTools = derive2 { name="DescTools"; version="0.99.31"; sha256="05w1rf07bjjp34gizdg2jbkv78jjzpy85fjp4s48yw9zbif1ppss"; depends=[BH boot expm MASS mvtnorm Rcpp]; }; + DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.5"; sha256="0i9qsbi78cii0bajc69m1gp4s88nrr1khyyyy4qkpv0x05vhbl0d"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.7"; sha256="0241mbz0y3ala7fsb4fwjd0xigsk0wq77hfrjyvnnp97rfjfzmcv"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.3.1"; sha256="1bqq56m4vhmgijxpyllpy08xx29k0p7lhmd0iwa06jdw4lj5rdah"; depends=[dplyr jsonlite magrittr RCurl reshape]; }; DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.4"; sha256="16j9ca3y8mcdbd64yqm6js4lb9hjc74dh4r5y3h1ifvwzj0a78yc"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; DetMCD = derive2 { name="DetMCD"; version="0.0.5"; sha256="034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.5"; sha256="1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; DetSel = derive2 { name="DetSel"; version="1.0.3"; sha256="0rd047nkdhil9ydizrhpqr9pcmi86bq0r0f14rbix6i9hplxz42v"; depends=[ash]; }; - DevTreatRules = derive2 { name="DevTreatRules"; version="1.0.0"; sha256="0jcvn01w5h0jmnimnn52isav5f1g3laivsmr73h0wwm95i2gkksx"; depends=[DynTxRegime glmnet modelObj]; }; Devore7 = derive2 { name="Devore7"; version="0.7.6"; sha256="1m18p8h9vv4v0aq2fkjyj39vzb8a09azbbczhfiv4y88w540i8nw"; depends=[lattice MASS]; }; Dforest = derive2 { name="Dforest"; version="0.4.2"; sha256="19jyph2zqfyq9vv22kb6fqy89l0vcviv19zgk10hbd7q850f6ryn"; depends=[ggplot2 rpart]; }; DiPhiSeq = derive2 { name="DiPhiSeq"; version="0.2.0"; sha256="11l2inf99vxz9k292307j8c2b25kc1066svy3vxrfl72rrm4fqa7"; depends=[]; }; @@ -1055,6 +1071,7 @@ in with self; { Diderot = derive2 { name="Diderot"; version="0.12"; sha256="1cq8yk4r0csnslp286hzs04zzq44q0frz0kyll9jhqjil34qh0x7"; depends=[data_table doParallel foreach igraph RCurl splitstackshape stringi]; }; DiffCorr = derive2 { name="DiffCorr"; version="0.4.1"; sha256="1kxp9dbiww086rmvmjvfhbk7jl36dkj88qwii6zg57llf7l5l4hm"; depends=[fdrtool igraph multtest pcaMethods]; }; DiffNet = derive2 { name="DiffNet"; version="1.0-0"; sha256="04dvf0qxnc6jizwfjxw731j7d2fxyapk06rmqvga6h3p075q0mqk"; depends=[data_table doParallel foreach gplots Hmisc igraph lsa Matrix qlcMatrix Rcpp RcppEigen]; }; + DiffXTables = derive2 { name="DiffXTables"; version="0.0.2"; sha256="01kxa0barwy9khwf9yyzdxi4561n5c0q9s2fps8gwb2afxdhxjm0"; depends=[Matrix]; }; DiffusionRgqd = derive2 { name="DiffusionRgqd"; version="0.1.3"; sha256="1gf5jpvimfrc9ccva0jk85rl4zfkbijm2305ky1rxcgm4kgw4lax"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRimp = derive2 { name="DiffusionRimp"; version="0.1.2"; sha256="1h7145ldlgwrrwj4l1wxdp2rbg2pm4v3pngiq0saz0xi3vpcxwl6"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; @@ -1065,16 +1082,17 @@ in with self; { Directional = derive2 { name="Directional"; version="4.0"; sha256="072131dqpnqp1hfnrzzqr1f2zpzfkk1ifflzfg727f0zhjvisd4d"; depends=[bigstatsr doParallel foreach MASS RcppZiggurat Rfast Rfast2 rgl]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3.1"; sha256="1lz4b166grrs6vs98mf6a0wg4hvh0p901h697h9dkfhkxw8cqj3f"; depends=[Formula maxLik rgl]; }; DisHet = derive2 { name="DisHet"; version="1.0.0"; sha256="056jcs1qpiyadnmlzd0cj4kp0qzkichxi0pdnxypyq1fsqnpvan3"; depends=[gtools matrixStats]; }; - DisImpact = derive2 { name="DisImpact"; version="0.0.4"; sha256="1fv446wr5b8ixcs473vqv5ak9q46vhgzflc1zg8x7k5q5fdwqhmm"; depends=[dplyr magrittr rlang]; }; - DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3-1"; sha256="0ij6r8l8xxjmnp0x29p0wlnq7bk1rmg7hxzfrs9qhb410rjxc3r4"; depends=[Rcpp]; }; + DisImpact = derive2 { name="DisImpact"; version="0.0.5"; sha256="1n0lyzv6abvrrcxj4zglyl9b0j4ldj0zkznh57frn1j1imb1na1l"; depends=[dplyr magrittr purrr rlang tidyselect]; }; + DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3-3"; sha256="1qdcmn74mmnk61y6lh76mnqk7hw7v3v67y0zljfz7s3h4vxpad4g"; depends=[Rcpp]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; + DiscreteQvalue = derive2 { name="DiscreteQvalue"; version="1.0"; sha256="19c2rmizrmpf5vmsfhnk5xswnngdlh1hfcj6k0qdp00kdfgj79ja"; depends=[]; }; DiscreteWeibull = derive2 { name="DiscreteWeibull"; version="1.1"; sha256="1rg3ax6jryagf5d3h8m44x9wyhr2qff3srfa9zrk6i64p1ahk9lr"; depends=[Rsolnp]; }; DiscriMiner = derive2 { name="DiscriMiner"; version="0.1-29"; sha256="1ii8aa4dwfk991qdnpmkva20wvs5fqcna9030c799ybf11qpdass"; depends=[]; }; DisimForMixed = derive2 { name="DisimForMixed"; version="0.2"; sha256="00mknsalikangr17946877m5fy2jgkgasgl6ng4f2nr44f0q9l6q"; depends=[cluster dplyr]; }; Distance = derive2 { name="Distance"; version="0.9.8"; sha256="19n1kjx7ikphp97118n0zwnv1prlxk9hcpn30ckxc4329m0cafvv"; depends=[mrds]; }; DistatisR = derive2 { name="DistatisR"; version="1.0.1"; sha256="0myzfki8yrk0nhgdgsqs4wjbqhzmkdil1g005hc7p4lz3gi09bfx"; depends=[car prettyGraphs]; }; - DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.1"; sha256="0ywf7i26lhcibm45g40i84gsnijmg5haz3730yzxlhv7nnnsyj1l"; depends=[AdaptGauss GA ggplot2]; }; + DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.4"; sha256="0qyfi1l8908r98ian1l9q72iz2cyzp09ykgip7l3py2p3m9cg8wc"; depends=[AdaptGauss GA ggplot2]; }; DistributionTest = derive2 { name="DistributionTest"; version="1.0"; sha256="0ga0cxk8i1n6p33ywy9j65df3p4ypnc6mimvkx3yi1diczln6dbx"; depends=[MASS]; }; DistributionUtils = derive2 { name="DistributionUtils"; version="0.6-0"; sha256="08vq54pyqxlqsj6q6gsg5ikqa0z3x842j52ld5dxaq272p6xchvl"; depends=[]; }; DivE = derive2 { name="DivE"; version="1.1"; sha256="1445pyw15dq48qsbnm2bgfm9xfffdww5xbhcs901ai0nyb3f7daa"; depends=[deSolve FME rgeos sp]; }; @@ -1089,16 +1107,16 @@ in with self; { DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; Dodge = derive2 { name="Dodge"; version="0.9-2"; sha256="0767n6hyspqrv5cgx3ghhai0qffj6haga7s86pv7mq8zvjcxjlzv"; depends=[]; }; Dominance = derive2 { name="Dominance"; version="1.1.0"; sha256="1dzfj79hv3ds72dy4fn14bp68fiw06vdxkp4dvyvj37yrrqpcxyz"; depends=[chron gdata igraph XLConnect]; }; - DoseFinding = derive2 { name="DoseFinding"; version="0.9-16"; sha256="0ncr95lf4mifmx6n2qkg8m3cn326zj9w4hr7afsdxg155l11w89z"; depends=[lattice mvtnorm]; }; + DoseFinding = derive2 { name="DoseFinding"; version="0.9-17"; sha256="1lj96443dj61nxqfl20rc1f6ja2clbr9j6b6l8vi2gpspx5i76qw"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; }; Dpit = derive2 { name="Dpit"; version="1.0"; sha256="02pnc00sk3bwxmxrg27638x0q62r7nsx2nr14zjjc5q880prdisv"; depends=[fitdistrplus gsl moments VGAM]; }; - DrBats = derive2 { name="DrBats"; version="0.1.4"; sha256="0jzl1jklxsbqf5hv3a71lckk51jxi1lnbk5zmvd4x3y9b9azl2cq"; depends=[ade4 coda MASS Matrix rstan sde]; }; + DrBats = derive2 { name="DrBats"; version="0.1.5"; sha256="1iaffippp9kwfrwryf7klmn8nsm2k8pc0bkgpxcsl4vxyy2na3mp"; depends=[ade4 coda MASS Matrix rstan sde]; }; DrImpute = derive2 { name="DrImpute"; version="1.0"; sha256="1adzarrwqb282pqgx2yqswp9rpwd1naxsmar54kddr6qyd6b923b"; depends=[Rcpp RcppArmadillo]; }; DrInsight = derive2 { name="DrInsight"; version="0.1.1"; sha256="02lqf6bwbgcgyg5zx16nvnzpagmcmbsngnhmyv47256vsd9vppjd"; depends=[igraph qusage]; }; DramaAnalysis = derive2 { name="DramaAnalysis"; version="3.0.0"; sha256="0hqyy79fyc13fxfrj9ghpydvys2j5pizfvsfii1dhk2a2adh7h3y"; depends=[data_table git2r httr readr reshape2 stringr tokenizers xml2]; }; - DriftBurstHypothesis = derive2 { name="DriftBurstHypothesis"; version="0.2.0"; sha256="0xgaiavl7h82y3dbhnzb1gqflfyvcvc4jzlxdng3163axvfp0m1j"; depends=[Rcpp RcppArmadillo xts zoo]; }; + DriftBurstHypothesis = derive2 { name="DriftBurstHypothesis"; version="0.3.0"; sha256="0v6b8bm683c0np99bwvn3x0bp9xwf9qgli2050n05iiqibc894np"; depends=[Rcpp RcppArmadillo xts zoo]; }; DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.3.0"; sha256="16vcv21dgnymhsy9j5x5pblnipf4hdyscajx6pr8kl6i95hs3hmj"; depends=[DEoptim ggplot2 Rcpp RcppArmadillo rtdists RWiener]; }; @@ -1108,29 +1126,30 @@ in with self; { Dykstra = derive2 { name="Dykstra"; version="1.0-0"; sha256="1rc1409ky0ysqr3ccq28yhbs94m6d0z2dfa66k4c7irxjvbagwz6"; depends=[]; }; DynClust = derive2 { name="DynClust"; version="3.13"; sha256="020zl2yljp47r03rcbzrbdmwk482xx27awwzv4kdrbchbzwhxqgm"; depends=[]; }; DynNom = derive2 { name="DynNom"; version="5.0.1"; sha256="1ahs93mks2z423sxk4wjgivdz4ggvwm87dha0aan4fg4jarai98s"; depends=[BBmisc compare dplyr ggplot2 magrittr plotly prediction rms shiny stargazer survival]; }; - DynTxRegime = derive2 { name="DynTxRegime"; version="4.1"; sha256="1gjklpyjf9gl1h94v8lhra0vg90bnci7f70nzmvg2gkfyin7jygv"; depends=[dfoptim kernlab modelObj rgenoud]; }; + DynTxRegime = derive2 { name="DynTxRegime"; version="4.2"; sha256="0i2n48jrlxma9q43fngc614z1hfyrc2hwcijpj7zl94rxzaa4zv2"; depends=[dfoptim kernlab modelObj rgenoud]; }; DynaRankR = derive2 { name="DynaRankR"; version="1.0.0"; sha256="1smxgsxl0s5ynlphssd2q59f40zxin8im91fdcvawchc4qj2lmgg"; depends=[dplyr rlang]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; - DynamicGP = derive2 { name="DynamicGP"; version="1.1-4"; sha256="0zlhlxbi53zd79dgp09625ghb5lfl5s4sdmf2849ajcc83wqfiih"; depends=[lhs]; }; + DynamicGP = derive2 { name="DynamicGP"; version="1.1-5"; sha256="12y56anyi3amn7czwkk4qakmgqq0mf80xrhb8ccy1sxzk7k86pfz"; depends=[lhs]; }; E4tools = derive2 { name="E4tools"; version="0.1.1"; sha256="1kmj1fddybjia9ninhcy75kdmq152zjw7s24chpqr5wsblffr3yx"; depends=[accelerometry anytime BBmisc chron data_table DataCombine doParallel doSNOW foreach ggplot2 hms scales signal]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; EBMAforecast = derive2 { name="EBMAforecast"; version="0.52"; sha256="1809ia0dpkilprv7x19drp1v2qckk0wm596f1i1vl0k37wbhcziv"; depends=[abind Hmisc plyr Rcpp separationplot]; }; - EBPRS = derive2 { name="EBPRS"; version="1.1.5"; sha256="05hs05qdjk9pl81axxrh3rz43mm939r7crvvcsdmv1dj6x0i4iyh"; depends=[data_table ROCR]; }; + EBPRS = derive2 { name="EBPRS"; version="1.2.2"; sha256="1lmcp6nvkl1gwamhaal8dab4z7knfp36i3c1y8ny80z9i69fip1h"; depends=[ROCR]; }; EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; }; EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECFsup = derive2 { name="ECFsup"; version="0.1-2"; sha256="0fpcab0gjgsc3sx0plpx068rw3a7kfzs2nyrr477a5m0rcbqf1kh"; depends=[foreach Rcpp RcppArmadillo]; }; ECGofTestDx = derive2 { name="ECGofTestDx"; version="0.4"; sha256="0y8bw1k9spwxyzc7vsi2iblnmjsidxbybjrzzh2j6frjmv3rk4g1"; depends=[bootstrap orthopolynom]; }; ECLRMC = derive2 { name="ECLRMC"; version="1.0"; sha256="01z2hmbpb754s2rsvx3i5wf7kkkr2mvs2g89ih2bqrif7w5rmgyg"; depends=[softImpute]; }; - ECOSolveR = derive2 { name="ECOSolveR"; version="0.5.2"; sha256="0sh0brv589naqb2q87abc88ys2kbir4vh02nvjm5cbajmibnkv8p"; depends=[]; }; + ECOSolveR = derive2 { name="ECOSolveR"; version="0.5.3"; sha256="1xglkx1x9kidznvcz61w0ayhfkgbmkxad92frabr9jsnlf6ns78n"; depends=[]; }; ECctmc = derive2 { name="ECctmc"; version="0.2.5"; sha256="0prryvc17bm1xrhzlqk2w9nj181bg99j1dph3d36h0n1vfq1d7if"; depends=[Rcpp RcppArmadillo]; }; ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.13"; sha256="0dq8ja4ydxnc7qx35qhh9ryqgi7ambwz6ka2821mmq3p994crswn"; depends=[jsonlite shiny]; }; - ECoL = derive2 { name="ECoL"; version="0.2.0"; sha256="17j2z05gdh8mbgc4k01m83rgbps9fjf1l6ykql0225bk4ai25h5a"; depends=[cluster e1071 FNN igraph MASS]; }; - EDA = derive2 { name="EDA"; version="1.2"; sha256="146kji0hk19vfag1j11vga5smkk1w4za9l5iakjgh61scsh2l791"; depends=[ggplot2]; }; + ECoL = derive2 { name="ECoL"; version="0.3.0"; sha256="02j4yl6hi83f6m529r6n0gaz8wsy2pi0ncy2g95fjhs8ib0kfn4f"; depends=[cluster e1071 FNN igraph MASS]; }; + EDA = derive2 { name="EDA"; version="1.3"; sha256="08zqykvga7w07iy00c94q03mrxmjv649ggk7lmksjzy5j3wgyb6d"; depends=[ggplot2]; }; EDFIR = derive2 { name="EDFIR"; version="1.0"; sha256="0nv1badyg1dri6z91fvs68a72g22vdg0rpi3fkpxw527r11fvrrv"; depends=[geometry lpSolve MASS vertexenum]; }; EDISON = derive2 { name="EDISON"; version="1.1.1"; sha256="12cc13ng5fc4nm0nvqxqplpb2ycz4cln73xqkk85dka2fnpykjc7"; depends=[corpcor MASS]; }; EDMeasure = derive2 { name="EDMeasure"; version="1.2.0"; sha256="1gyv86vip0a3939dbbwz29xkqzncw24r68fzykdjnv3b995510iv"; depends=[dHSIC energy rBayesianOptimization]; }; + EDOIF = derive2 { name="EDOIF"; version="0.1.1"; sha256="0lhaajiq01rrvpp2xq2n6ka7pd4xz0spxrf1xv8ljpi2w9kk4p7l"; depends=[boot distr ellipsis ggplot2 igraph simpleboot]; }; EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; EFA_MRFA = derive2 { name="EFA.MRFA"; version="1.0.5"; sha256="0zq587kbl5dzwh7ilp47592frmzyqfh8m4da0830yi1060whdblk"; depends=[ggplot2 optimbase PCovR psych reshape2 scales]; }; @@ -1178,6 +1197,7 @@ in with self; { ENMeval = derive2 { name="ENMeval"; version="0.3.0"; sha256="0q5s8nxig8kbr0cblfmf3k20ri19fjs770a0fnzsk0kwlac414hw"; depends=[dismo doParallel foreach maxnet raster]; }; ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; }; ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; }; + EPT = derive2 { name="EPT"; version="0.7.3"; sha256="0ymg16wd2dkn6nb0hq43niycydpy5dnadq4011a3815qrkyj7670"; depends=[]; }; EQL = derive2 { name="EQL"; version="1.0-1"; sha256="0pa33h0f30l352m6ix296l55lvqxdaib666x2dwy9zx0lmk23w8m"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; ERP = derive2 { name="ERP"; version="2.1"; sha256="0l3vgg7szfgi7a6qh93lh2sjnkwkhw02laxdl7x87jirmmsx3157"; depends=[corpcor fdrtool irlba mnormt pacman]; }; @@ -1197,13 +1217,13 @@ in with self; { EWOC2 = derive2 { name="EWOC2"; version="1.0"; sha256="1x3l332pmh69kl0c1rka264mi69avdm938mzd79ck4y3qcgn07vr"; depends=[MASS rjags]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; EZtune = derive2 { name="EZtune"; version="2.0.0"; sha256="1arrd9zkssb8ixx7r4nxwayksz1mk7jkvlcbm264pv9ya6kh3yrh"; depends=[ada e1071 GA gbm optimx rpart]; }; - Eagle = derive2 { name="Eagle"; version="1.5.2"; sha256="1pwxqwj1ff7hlfcsr9n1ria686aavzk6pmvr1ac9r0dx2h20nskr"; depends=[data_table ggplot2 ggthemes matrixcalc Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; + Eagle = derive2 { name="Eagle"; version="2.1.1"; sha256="0sx9fg3awv086861jyj18a814m6jdckzdvds6375wyd5cvi2ifqd"; depends=[data_table ggplot2 ggthemes matrixcalc mmap R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; EasyMARK = derive2 { name="EasyMARK"; version="1.0"; sha256="10slkblbyxq98c3sxgs194dnkx996khfcpxj6jhz355dp35z7c9d"; depends=[coda doParallel foreach MASS random rjags stringr]; }; EasyMx = derive2 { name="EasyMx"; version="0.2-1"; sha256="03yshzb4wh3n667z9lmrwsz16chpgnl8qv3qlx425mj5iiyv626z"; depends=[OpenMx]; }; EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; }; - Ecdat = derive2 { name="Ecdat"; version="0.3-3"; sha256="0rxhl0i3hhfcc19744nkqjz0hziil72m0b5jharw99ackyi3hrfs"; depends=[Ecfun]; }; + Ecdat = derive2 { name="Ecdat"; version="0.3-4"; sha256="07c6cv8dnz7781i9aavr0gx573nkmqam5v157kkq7478ia1cccpb"; depends=[Ecfun]; }; Ecfun = derive2 { name="Ecfun"; version="0.2-0"; sha256="1clxwmwd4lmhh7zqspqgn13vrzg40lbqzb0a7b90qla4hk9r4zm4"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML xml2]; }; EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-5"; sha256="1953q374msvdw91m2nagxkwh5r9gnq5qss6l6mf34hayq3kwm8s9"; depends=[d3heatmap doParallel edgebundleR foreach ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12.1"; sha256="075kgy6cxppkclk6nj5xs1f5yv9w8cpr09xwhf2101a6wswknb88"; depends=[DEoptim operators topmodel XML]; }; @@ -1217,9 +1237,9 @@ in with self; { EdSurvey = derive2 { name="EdSurvey"; version="2.3.2"; sha256="1cw0s2jpgb7jkcly5vk96jpdgdy7nlf0ri37ab17f108mi8gb8nn"; depends=[car data_table Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPprimer quantreg RColorBrewer readr readxl rvest stringi stringr tibble wCorr WeMix xml2 xtable]; }; EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.4"; sha256="1gqi3mnxnhsynk63hr0ny93m60xq4a0sjc5x0p67l6xybn2fk011"; depends=[editrules igraph Rcpp]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-3"; sha256="05yydwi40m5hrda01l9nj8y3d85l2n04nr39k1kni4zbciinls2b"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; - EffectStars = derive2 { name="EffectStars"; version="1.9"; sha256="15n5mrba2s0qxcg3zikfwpxqwv38h39zmvj8sz62ni4pdhrhhjh3"; depends=[VGAM]; }; - EffectStars2 = derive2 { name="EffectStars2"; version="0.1-2"; sha256="0121zb627zwkgbb84sn2dclph56dc5rkfjpci5xwd0w99vh3q66l"; depends=[miscTools VGAM]; }; - EffectTreat = derive2 { name="EffectTreat"; version="0.4"; sha256="05r8frrir2dnivj21raczchf9qligqdccnnpj1kwi0zgr5h4spz6"; depends=[]; }; + EffectStars = derive2 { name="EffectStars"; version="1.9-1"; sha256="131w5bdc615gaa2czi4wyc2f96jcg24ahcmggajrvyhxmi6rag5x"; depends=[VGAM]; }; + EffectStars2 = derive2 { name="EffectStars2"; version="0.1-3"; sha256="0yh4krqjh1jb7gjxb9z4f5bzarps0g9jfqbbva782a881dhcdl1x"; depends=[miscTools VGAM]; }; + EffectTreat = derive2 { name="EffectTreat"; version="1.0"; sha256="1dvhqp3psjllzbv82xcxz3qxni0yv83yc16598185s42zvm6582z"; depends=[]; }; EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.4"; sha256="1s0i9a2vk2g4f5gadsvzjfkw91hcjsrbyjg2vgnj1v17xrwgp40w"; depends=[]; }; ElastH = derive2 { name="ElastH"; version="0.3.1"; sha256="1xgmz0xirvdyjz8l31zb2j91nj0g8ffhvzp44b97473fsj06n1g6"; depends=[dlm]; }; @@ -1250,13 +1270,13 @@ in with self; { EnvStats = derive2 { name="EnvStats"; version="2.3.1"; sha256="0ang2s222znrvzvidyvj2sa2bqx95bxicff64p6w2a7z88mx8lyp"; depends=[ggplot2 MASS nortest]; }; EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; - Epi = derive2 { name="Epi"; version="2.38"; sha256="0ald9fjynrlyah8nzwfs49a08j4myd3c5bm56zn61gg5pyyhi8hd"; depends=[cmprsk data_table etm MASS Matrix mgcv numDeriv plyr survival zoo]; }; + Epi = derive2 { name="Epi"; version="2.40"; sha256="046y10vwks5y84pzccmrn6d4pd6qz70imvp1hw5ywp8fnwzfh4g5"; depends=[cmprsk data_table etm MASS Matrix mgcv numDeriv plyr survival zoo]; }; EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.12.0"; sha256="1i84fslz8sdngvkv34zhzjwzrzzxx6f4s31p8f5smmf028jlpyys"; depends=[]; }; EpiCurve = derive2 { name="EpiCurve"; version="2.2-1"; sha256="091q03lak2nfk83s10004qnwdng0gl4z92pc174mc41wns7f5d8v"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales timeDate]; }; EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="2.2-1"; sha256="1a21mskjvyz9qdvl3kkf0p15zn1nx1a49c5djp1lacrn6h7g8k9p"; depends=[coarseDataTools coda fitdistrplus ggplot2 gridExtra incidence reshape2 scales]; }; EpiILM = derive2 { name="EpiILM"; version="1.4.2"; sha256="16vml2p7c4nv0lfis661x7b9wimrni1ncpa256dh99cps9508j28"; depends=[coda]; }; - EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.3"; sha256="10snghwkapg6n6lhkf5v3w2g0ngkq556px65ccc4dgyndhwdsqmm"; depends=[coda igraph]; }; + EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.4"; sha256="033m5v9x9f8wg6ayw0byzrm60ip9c1ksfyjyfdw14vifmpjxkz7k"; depends=[coda igraph]; }; EpiModel = derive2 { name="EpiModel"; version="1.7.3"; sha256="037y5q25cy3zqbj236pxx30iax2bz1wag0ndffmglhbq17da2w1s"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; EpiReport = derive2 { name="EpiReport"; version="0.1.0"; sha256="1bfh7nrwmplsk7whvmsf0wxg795xrwvarxw974v58mjb282yp87s"; depends=[dplyr extrafont flextable ggplot2 knitr officer png rmarkdown tidyr zoo]; }; EpiSignalDetection = derive2 { name="EpiSignalDetection"; version="0.1.1"; sha256="04bagnx9fs0r3167hmwgc389fl5hq7l4j6kdjjmi360vcaimx9qi"; depends=[dplyr DT ggplot2 ISOweek knitr pander rmarkdown shiny surveillance]; }; @@ -1269,8 +1289,8 @@ in with self; { EstMix = derive2 { name="EstMix"; version="1.0.1"; sha256="13zwhxm0qm83c8k5k4slvq2snkmbq1zz3i5cqvxxwhvkb4b8aja4"; depends=[PSCBS Rcpp RcppArmadillo]; }; EstSimPDMP = derive2 { name="EstSimPDMP"; version="1.2"; sha256="05gp0gdix4d98111sky8y88p33qr5w4vffkp6mg9klggn37kdj8j"; depends=[]; }; EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.1.2"; sha256="148srhlpzh0scvnkjbkyia1pr8a2ridabm3dahw4zn7p3cryiyb1"; depends=[igraph qgraph]; }; - EstimationTools = derive2 { name="EstimationTools"; version="1.2.0"; sha256="1lawxzkcmzds3c69lvilbbrs799zl6ph8sf94j5cg1n9kipgi547"; depends=[BBmisc boot DEoptim knitr numDeriv Rdpack rmarkdown]; }; - EthSEQ = derive2 { name="EthSEQ"; version="2.1.2"; sha256="0w75d8kw1bf4mfgk8rrx6vzq002z2588kxgadyfag0vk9s4akxi3"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; + EstimationTools = derive2 { name="EstimationTools"; version="1.2.1"; sha256="0m3q71ag73ph52a6nyvwh6i33d2c42dbbx7vww9h7pqkc09z1j7a"; depends=[BBmisc boot DEoptim numDeriv Rdpack]; }; + EthSEQ = derive2 { name="EthSEQ"; version="2.1.3"; sha256="168wxxb1cyrfr8s4f9gxqj64dmc4i24g5k6yys3xay9c932gf98y"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; EurosarcBayes = derive2 { name="EurosarcBayes"; version="1.1"; sha256="12311s6ibw9q6kykhh689r93r7mwjhwrhkzdpc75grvw6ilgjmpm"; depends=[clinfun data_table plyr shiny VGAM]; }; EvCombR = derive2 { name="EvCombR"; version="0.1-2"; sha256="1f5idjaza91npf64hvcnpgnr72mpb7y6kf91dp57xy9m14k7jx5g"; depends=[]; }; EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; @@ -1283,7 +1303,7 @@ in with self; { Evomorph = derive2 { name="Evomorph"; version="0.9"; sha256="1br2fyggwz2mxpic8sk384xq1lpbpv0j5gf6xyzhkn2n7kfpf6d5"; depends=[geomorph ggplot2 reshape2 stringr]; }; ExPanDaR = derive2 { name="ExPanDaR"; version="0.4.0"; sha256="0clvdjhlkjw6wyfczp5lxkn0cmmxhwfna5p454aix7nkqnvck4wa"; depends=[corrplot dplyr DT ggplot2 Hmisc kableExtra lfe lmtest multiwayvcov openssl rio scales shiny shinycssloaders stargazer tictoc tidyr]; }; ExPosition = derive2 { name="ExPosition"; version="2.8.23"; sha256="0x9400ggmgrnaish0cfgnyvw549g4ibfv9aj6vzq7j68n58vq405"; depends=[prettyGraphs]; }; - Exact = derive2 { name="Exact"; version="1.7"; sha256="0d0h406w2l99gxq6pmh9crxxrvdidcajk7bqzmifl7nfb77vp1av"; depends=[]; }; + Exact = derive2 { name="Exact"; version="2.0"; sha256="142yiz9bz1abgpdqkzgdsz3bp3dwbjlmyg29a62djb8630aicgyn"; depends=[]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; }; ExcessMass = derive2 { name="ExcessMass"; version="1.0"; sha256="1z8l1lja02wxw8l72s3bq6sgjymn5929n123xk6b7ndd52zlfgf5"; depends=[]; }; @@ -1334,10 +1354,11 @@ in with self; { FIT = derive2 { name="FIT"; version="0.0.6"; sha256="1nkjms9cvigc9sjha1krzhd3nmwsfh8pi0f1plf5k8zpb773zzb2"; depends=[gglasso MASS Rcpp RcppEigen XML]; }; FITSio = derive2 { name="FITSio"; version="2.1-0"; sha256="021xmbavigg70m96xw1bvsdasi5yj2wmafgb6xw4b09fmyv9hvjp"; depends=[]; }; FKF = derive2 { name="FKF"; version="0.1.5"; sha256="1qzf7y3f4xfirjkm795rcxckjbw6sn7xpilhkyvayqm2vyhf7518"; depends=[RUnit]; }; + FKSUM = derive2 { name="FKSUM"; version="0.1.0"; sha256="1gg76wiklyazm8k80v3c6z2xjb5mch3w54vjl84jllj2c19bcfbw"; depends=[MASS rARPACK Rcpp RcppArmadillo]; }; FLAME = derive2 { name="FLAME"; version="1.0.0"; sha256="0va9mbwlnvr64hii203rmq4x3izpix0x36kpsns43yb9wdqq70hv"; depends=[dplyr gmp lattice latticeExtra reticulate rlang RPostgreSQL RSQLite]; }; FLLat = derive2 { name="FLLat"; version="1.2-1"; sha256="0306bpwp2az4x4m5sv88hlh7vs0y5isfby7lxrn2gjnk76gg6mw1"; depends=[gplots]; }; FLR = derive2 { name="FLR"; version="1.0"; sha256="0k50vi73qj7sjps0s6b2hq1cmpa4qr2vwkpd2wv2w1hhhrj8lm0n"; depends=[combinat]; }; - FLSSS = derive2 { name="FLSSS"; version="8.5.5"; sha256="00hcfbzc6v4xyhmlqc1ypl7df2x134dbsl21l7rh3zcmp2vc9ayr"; depends=[Rcpp RcppParallel]; }; + FLSSS = derive2 { name="FLSSS"; version="8.5.6"; sha256="1c6j54ihc385m1f0r86yb83zqv2myfskq48bh9dcynlnc9crs428"; depends=[Rcpp RcppParallel]; }; FLightR = derive2 { name="FLightR"; version="0.4.9"; sha256="0rcnkifq6mi1i5xhk6qy2gl3bry269y4isfr8phl3car0yj39lw1"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme raster RcppArmadillo rgdal rgeos sp truncnorm]; }; FMAdist = derive2 { name="FMAdist"; version="0.1.0"; sha256="0aa4sw93ia6cp386hrq6x448x4w0p6k198rjaqs474j25gqgxrv0"; depends=[EnvStats extraDistr fitdistrplus MASS quadprog STAR]; }; FMC = derive2 { name="FMC"; version="1.0.0"; sha256="1pfqxx7slgcmw4al7i8hy59f4han6b0b7b5az7yh1mscdnghl9bj"; depends=[minimalRSD]; }; @@ -1358,7 +1379,7 @@ in with self; { FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.1.0"; sha256="1gi637fwfpwbghms96bmfqs7zirjskd9hxiw43s0765h3ypjqwx1"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; FRK = derive2 { name="FRK"; version="0.2.2"; sha256="0m0ngxanyq19myzza4fb75k9vb67mv17iny847bv9qrgg2vbm5r8"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; FRegSigCom = derive2 { name="FRegSigCom"; version="0.3.0"; sha256="0w0yhch75wdx6phf5h4radipgpndv5bfxva2pzzd99fkmws4sswn"; depends=[fda Matrix Rcpp RcppEigen]; }; - FSA = derive2 { name="FSA"; version="0.8.25"; sha256="035hbw36bmyvk947lkf6f96930wla7wlyn77zrnswl2ikxriif1p"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot withr]; }; + FSA = derive2 { name="FSA"; version="0.8.26"; sha256="1gnmch98y8b6bssnz769d987rmvyiadrpshpjf5qihcnnq6jp2sy"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot withr]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.8"; sha256="0i7wkz0baxcf1dv6qvc891b4ja4x65p4qicil472k6a9gcf5d4qm"; depends=[]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; FSMUMI = derive2 { name="FSMUMI"; version="1.0"; sha256="06ri1zi86cm4arjdlp2pha2bvcc8vz6irvd9n3ja074hv62wxcw4"; depends=[FuzzyR lsa]; }; @@ -1371,8 +1392,8 @@ in with self; { FacPad = derive2 { name="FacPad"; version="3.0"; sha256="0h7knzin0rfk25li127zwjsyz223w7nx959cs328p6b2azhgn59b"; depends=[MASS Rlab]; }; FactMixtAnalysis = derive2 { name="FactMixtAnalysis"; version="1.0"; sha256="1l4wfp39b7g38vdk6jpd5zq08sjhsg0s71f662aca2rj6l3a2x3r"; depends=[MASS mvtnorm]; }; FactoClass = derive2 { name="FactoClass"; version="1.2.7"; sha256="0hvlr9cw6wfckl8rzl5qqyp0h8rv8gcnyj6x930jq7h44kj0ji7d"; depends=[ade4 ggplot2 ggrepel KernSmooth scatterplot3d xtable]; }; - FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.4"; sha256="1svz4w025jhy907rmg5w4c3wrwadwncb420w2dc1b3nhhysh0llv"; depends=[FactoMineR rmarkdown rrcov]; }; - FactoMineR = derive2 { name="FactoMineR"; version="1.42"; sha256="1yl16inb2m89l1czgaf0pgy9655dpr751hyx92yw6rqpd2ryznac"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; }; + FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.5"; sha256="079x3n6jh69vrgqmjskccscd21g0vni6bsyga928gndz9nvh3807"; depends=[FactoMineR ggplot2 rmarkdown rrcov]; }; + FactoMineR = derive2 { name="FactoMineR"; version="2.0"; sha256="0qiw60ypf3bf5xsqz2b9l82i4jvprjm8lzpp12lhl8d9j5s8m0j8"; depends=[car cluster ellipse flashClust ggplot2 ggrepel lattice leaps MASS scatterplot3d]; }; FactorsR = derive2 { name="FactorsR"; version="1.4"; sha256="1nw63j9bi4x09pgdvdml0w0qxfy1dda5hkxbhd3d6f7rky1z0nyf"; depends=[]; }; Factoshiny = derive2 { name="Factoshiny"; version="1.0.7"; sha256="1s4pnikv6n767z2x8s5gqqsj64yf9ivpdb5xw0qviizf9qwg8yvi"; depends=[colourpicker FactoMineR shiny]; }; Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; @@ -1395,7 +1416,7 @@ in with self; { FatTailsR = derive2 { name="FatTailsR"; version="1.7-5"; sha256="1l2anaf4kixidmvya64ni5b78bl9w2n6xf1lnf297lkdka8gxigw"; depends=[minpack_lm timeSeries]; }; FateID = derive2 { name="FateID"; version="0.1.9"; sha256="0n02591wpi4n0ga42v4xd1jzskcl56nvvls48sdkcnvc7cyi0hjv"; depends=[lle locfit pheatmap princurve randomForest RColorBrewer Rtsne som umap]; }; FeaLect = derive2 { name="FeaLect"; version="1.14"; sha256="1h6jc8n57mvyz3gi2jdx5xacwv5iim5sx86qzrg3v1higfr54b1l"; depends=[lars rms]; }; - FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.3"; sha256="0k8n3c0yiz6bb9rq6ra8z2hypb4hw4qcsdfbrgrw74kqivscs62i"; depends=[BH digest magrittr Matrix Rcpp]; }; + FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.4"; sha256="00yrji3grqgzg8c1hwqq5kb9xgqlnzwymy0b38cwixadc5w5lq8m"; depends=[BH digest magrittr Matrix Rcpp]; }; FedData = derive2 { name="FedData"; version="2.5.7"; sha256="07qgqhd3pg86qsih1ap7j02vriwabqna974q68bapfm52qnvm77z"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf sp stringr tibble xml2]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.5"; sha256="05n8lvx3cs1ckliaj7ni2rbfcrdl7d0pzf9bkwlyd1779h684cxz"; depends=[data_table devEMF ggplot2 gridExtra plyr png sqldf stringr]; }; @@ -1409,7 +1430,7 @@ in with self; { FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.3.1"; sha256="0f1zaclrcmpkdhcfc8a09f7lsf2b7gfyd7js3173qckn84a01f3w"; depends=[quantmod TTR xts zoo]; }; FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; }; FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; - FindIt = derive2 { name="FindIt"; version="1.1.4"; sha256="1rnkxngkqsmqs0d0m8ihscpsigxbjgl5ga5nyfwf97b1hrbv4j37"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; + FindIt = derive2 { name="FindIt"; version="1.2.0"; sha256="0zrvkvj907fw86jnzzlwk4d90hi42nq45jprp16xryxb7xxii6i8"; depends=[arm glinternet glmnet igraph lars limSolve lmtest Matrix quadprog sandwich]; }; FinePop = derive2 { name="FinePop"; version="1.5.1"; sha256="184707yvh2mydx42vxrdgv0n4v2dad4an7c4yvlyb9d7z6h0sw2x"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; FisPro = derive2 { name="FisPro"; version="1.0"; sha256="0wj5xf8qcrbmfixmsirwaf9yl5gk0bb588csp867c8n5jnqqyq0p"; depends=[Rcpp Rdpack]; }; @@ -1436,8 +1457,8 @@ in with self; { ForeCA = derive2 { name="ForeCA"; version="0.2.4"; sha256="1i19lmhl1kgfnd7zipjr6xp5ir9rvjy13sbq321jaf8ya60bjdd9"; depends=[ifultools MASS reshape2 sapa]; }; ForecastComb = derive2 { name="ForecastComb"; version="1.3.1"; sha256="07cbiv172mpkwvg6svhwgavlfy2144ir3y1l7w37wbd0ygs514id"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; - ForecastFramework = derive2 { name="ForecastFramework"; version="0.10.1"; sha256="0g9d7248zadbhr5gs0rnl2ckjj4xa08nkwlb8kfsvdnnfzihcz4p"; depends=[abind dplyr lubridate magrittr R6 reshape2 tibble]; }; - ForestFit = derive2 { name="ForestFit"; version="0.4.1"; sha256="06lylnd1jhx0nhvqhir8v98lpli54alcvjdpgmvaw1zgyz154hd0"; depends=[ars]; }; + ForecastFramework = derive2 { name="ForecastFramework"; version="0.10.2"; sha256="0p7s08bfjm297diy22km245h7hwla7986qavib6gpgigary6y64k"; depends=[abind dplyr lubridate magrittr R6 reshape2 tibble]; }; + ForestFit = derive2 { name="ForestFit"; version="0.4.6"; sha256="00gjg1v21by2w7gmgf169vs8scyj0c9l2pf980fm4win4rwndla5"; depends=[ars]; }; ForestGapR = derive2 { name="ForestGapR"; version="0.0.2"; sha256="0xig9nal83xg312kgq6dhi7n67sa8ixlnh79x957w3n5rv9kdyf2"; depends=[igraph raster rgeos sp spatstat VGAM viridis]; }; ForestTools = derive2 { name="ForestTools"; version="0.2.0"; sha256="0q9nk9n001bnz5hd8cxj6wmaf8c7g0kwfkpa0hk6ap42666rrrah"; depends=[APfun imager raster rgeos sp]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; @@ -1458,7 +1479,7 @@ in with self; { FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.10"; sha256="0iaay6qz9a2s77xjfpp7wm37y7xwnvmlw6s5k5riccmqzc6dcjs7"; depends=[mvbutils]; }; FunctionalNetworks = derive2 { name="FunctionalNetworks"; version="1.0.0"; sha256="071hjgiccbrf1gxrh7niw2w1p6vgc77qvrildi59xhk53qcwzqdp"; depends=[Biobase breastCancerVDX]; }; - FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.2.0"; sha256="1qhzxxvli4zirv7fgikfww3rdwgr6plnm4zzwggbcfq9kamzylhn"; depends=[dplyr ggplot2 ggrepel rlang scales]; }; + FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.2.1"; sha256="05ldz8z2aq9xgs6p7f26vk1babb3mryw4cghhr64m5q6xh7nkwy3"; depends=[dplyr ggplot2 ggrepel rlang scales]; }; FusionLearn = derive2 { name="FusionLearn"; version="0.1.1"; sha256="0n8bj7k2r2vf0v2nsw31k75hzkqj5l4hyfnmvid102hx9cl8hv3y"; depends=[]; }; Fuzzy_p_value = derive2 { name="Fuzzy.p.value"; version="1.1"; sha256="13h6armh9g57zqxyjqk6mq81jlfqxqrg2sb5p9rrhslka5m01zis"; depends=[FuzzyNumbers]; }; FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.1"; sha256="056k3gr257qg5wzcgaw0ad5y5cfzdlqkfypl170f0yy0l7gfzag1"; depends=[MASS]; }; @@ -1466,7 +1487,7 @@ in with self; { FuzzyMCDM = derive2 { name="FuzzyMCDM"; version="1.1"; sha256="0ss0s65mm6j0nax4mb9g668d9n9cgl0l016mc3h9hbjxfpqrbkks"; depends=[RankAggreg]; }; FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-6"; sha256="1zba28kmzpcza099k1ck7aqn7ms2fh3ijcn05xdimvssjbhsag81"; depends=[]; }; FuzzyNumbers_Ext_2 = derive2 { name="FuzzyNumbers.Ext.2"; version="3.2"; sha256="0gldq0bg1p1vmrn35prha44d7lyymz0jzshdyp2c5rx433mny7h5"; depends=[FuzzyNumbers]; }; - FuzzyR = derive2 { name="FuzzyR"; version="2.1"; sha256="08mhwzyksw0snxxcwn2kg62ya8smfvrls30znqhmnbkn5ijz0642"; depends=[plyr shiny]; }; + FuzzyR = derive2 { name="FuzzyR"; version="2.3"; sha256="0y22924vhvybiwhsfl3svizk4sgrvg4a8wl30b5kb2c0vjv03ad6"; depends=[plyr shiny]; }; FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.4"; sha256="1jpqb8xczi1d4g306vrwpi02f9h59aki1pgnckvfmiclr306prpb"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; FuzzyStatTra = derive2 { name="FuzzyStatTra"; version="1.0"; sha256="1ijrlnlmq9d5ahgrpzba6kzkaq1zq59zqdgcizybsf9alsswcm00"; depends=[]; }; FuzzyToolkitUoN = derive2 { name="FuzzyToolkitUoN"; version="1.0"; sha256="104s45mmlam67vwpshhpns2mgwvmhnbj8w1918jyk2r5mqibwz06"; depends=[]; }; @@ -1476,7 +1497,7 @@ in with self; { GABi = derive2 { name="GABi"; version="0.1"; sha256="1zmiaqbd1jrpiz9hk16s8rggcpl3xyyhjkkdliymx2p42vy5b5mf"; depends=[hash]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; - GADMTools = derive2 { name="GADMTools"; version="3.7-1"; sha256="0x7izby7gzaraffwrg7pxzwm4b8znsjyhyrms122vmm1flm0cfpr"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr tidyverse]; }; + GADMTools = derive2 { name="GADMTools"; version="3.7-2"; sha256="0aabbs35wbcchab32phiaajzf5zgiis3qfv4nr5dc0mf0qjgsc6h"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr tidyverse]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; GAMBoost = derive2 { name="GAMBoost"; version="1.2-3"; sha256="0450h9zf12r524lxk1lrv9imvvkk6fmyd3chnxp18nnvys7215pv"; depends=[Matrix]; }; GAMens = derive2 { name="GAMens"; version="1.2.1"; sha256="1z10wxcg277fra2lch464l0kb02lspw9qr1i2wmq11wcz0k9qnl8"; depends=[caTools gam mlbench]; }; @@ -1502,14 +1523,14 @@ in with self; { GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.3"; sha256="1xprkpjp1pkq4ci1n32d3yy80hx3r4xf2j7f6hv7dvsn4cvdp417"; depends=[gee]; }; GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.18"; sha256="17m58i3jridgxzcckcm0ydd2ijw3zjvg9w4an8j5jbnr62hmcb2s"; depends=[changepoint GENEAread MASS rpart signal]; }; - GENEAread = derive2 { name="GENEAread"; version="2.0.7"; sha256="0qx14frs8h81k824z3ham0r3lf7hcvmbhcvkwhhzdz18ggfcdr6m"; depends=[bitops mmap]; }; + GENEAread = derive2 { name="GENEAread"; version="2.0.8"; sha256="1phiwdq05h92vlrjbvx4xvazzls5bdlnwfxn5mghx0v9j0n3ahrm"; depends=[bitops mmap]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.6"; sha256="0xyq3ggi814vi3x5kxffhi7ygvzcfj3pg0kfi7whcjpi3pjg05h8"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; GENMETA = derive2 { name="GENMETA"; version="0.1"; sha256="1mxwqnbg5bvx1qg62xcd62dl81k11l64yckhl3v854asnaczq3pp"; depends=[magic MASS Matrix]; }; GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; GERGM = derive2 { name="GERGM"; version="0.13.0"; sha256="1h3fzkgc553bvxhcmvmlgk9sdais186h4gs1qagdihwpwn8ymbjk"; depends=[BH coda ggplot2 igraph matrixcalc plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; }; GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; }; GESTr = derive2 { name="GESTr"; version="0.1"; sha256="1q12l2vcq6bcyybnknrmfbm6rpzcmxgq2vyj33xwhkmm9g2ii9k6"; depends=[gtools mclust]; }; - GET = derive2 { name="GET"; version="0.1-3"; sha256="115hrwdxv2kpfl372r1h7qjyazm50z3zx76ydhjsaj6pp5zspdw5"; depends=[caTools fda_usc ggplot2 gridExtra gstat plyr sp spatstat]; }; + GET = derive2 { name="GET"; version="0.1-4"; sha256="1zn0jsl77xslf3rkm1py709jhqd3ciyyhiwph6d9ih2nkla9ivak"; depends=[ggplot2 gridExtra gstat plyr sp spatstat]; }; GEVStableGarch = derive2 { name="GEVStableGarch"; version="1.1"; sha256="1iypv0k4cbvsdyglgvf7y52sqvl5qcin627pjqwq42kisqynm8d7"; depends=[fExtremes fGarch Rsolnp skewt stabledist timeDate timeSeries]; }; GEVcdn = derive2 { name="GEVcdn"; version="1.1.6"; sha256="09lzhh16r1hsxa23jkq716yf3x9ap6fkkrz3ij2x83rvwznj8hb3"; depends=[VGAM]; }; GEint = derive2 { name="GEint"; version="0.1.5"; sha256="179gpq4qjhgx1fhyjdb80rf2ip80zhhfyn8xjgwq1a425163q1y7"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; @@ -1521,7 +1542,7 @@ in with self; { GFORCE = derive2 { name="GFORCE"; version="0.1.4"; sha256="1x7dvzgnqfvyvp6ibdsnrn5q01ivcgkzkh0mv8nfwqg5zr78v2cz"; depends=[lpSolve MASS]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="1.10-4"; sha256="1mdxknp4gc8blfs8lsywamdxa4ki9yf0yzwmjinyasq9mg4a1snm"; depends=[bitops data_table doParallel foreach GENEAread matlab Rcpp signal tuneR zoo]; }; + GGIR = derive2 { name="GGIR"; version="1.10-7"; sha256="1h2krqfwpxf29a5plpw17sydp38d97w2kskpydgvi6ahdlfc9yzg"; depends=[bitops data_table doParallel foreach GENEAread matlab Rcpp signal tuneR zoo]; }; GGMM = derive2 { name="GGMM"; version="1.0.1"; sha256="1d0qxxdk7b3hzg7dimsbjabpf5rxn3azn2hy00pa1c6wya7kxyvv"; depends=[equSA huge mvtnorm]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; GGMselect = derive2 { name="GGMselect"; version="0.1-12.2"; sha256="16d4nz5x3yy9lw974gdls18fnx7g1hfghzfq3wh7739c54pvd5gs"; depends=[gtools lars mvtnorm]; }; @@ -1529,6 +1550,7 @@ in with self; { GGally = derive2 { name="GGally"; version="1.4.0"; sha256="1zjmcc5bzagvy7c5cmdcl39xmx07fwi98yrj4i05w7y40kqcsiws"; depends=[ggplot2 gtable plyr progress RColorBrewer reshape rlang]; }; GHQp = derive2 { name="GHQp"; version="1.0"; sha256="0qpcpwv7rz67qhz1p5k2im02jvs7l8z9sa6ypz13hig5fzm8j9bp"; depends=[statmod]; }; GHS = derive2 { name="GHS"; version="0.1"; sha256="1khjfy62a67r59s2rax9mmnqy5xnnwhbydzhqwwmyspl48mxycdj"; depends=[MASS]; }; + GIFTr = derive2 { name="GIFTr"; version="0.1.0"; sha256="101vr2qasky8hnxp5i3lhlnymwzciypqwvhpl6mrr0r0czgpcz2f"; depends=[glue stringr]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; GJRM = derive2 { name="GJRM"; version="0.2-1"; sha256="12kbd8nd43fi4vwjc9qpjwcndwx9zq19w0adqxivmlvxhflh93mb"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; @@ -1541,18 +1563,18 @@ in with self; { GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; GLMpack = derive2 { name="GLMpack"; version="0.1.0"; sha256="15bpw42y999ljdw8ka2ysrrm0y73xz37wwi3j67i01wafipq82xy"; depends=[AER censReg effects foreign lme4 lmtest MASS Matrix nnet pBrackets plm pscl sandwich]; }; GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; - GLSE = derive2 { name="GLSE"; version="0.1.0"; sha256="1snzcz637ppz3lkg1575ln3shfidkrnynqh1d8b5rk0z0974bpm1"; depends=[gRbase igraph mvtnorm]; }; GLSME = derive2 { name="GLSME"; version="1.0.5"; sha256="18gixzg8b8yql91dhv8xsrcrxdix0kr0qgmiva0hwmyzpsn6rqam"; depends=[corpcor mvtnorm]; }; GMAC = derive2 { name="GMAC"; version="3.0"; sha256="0c2cfpr8dik7j5br87hkvswrhqzj5vcna54gw6ffdf1rk9rz9j22"; depends=[]; }; - GMCM = derive2 { name="GMCM"; version="1.3.2"; sha256="0sm08kf6ia2fi69zqv4nhnlk71v75b5sz2vd3aj0kfhgan7bl93i"; depends=[ellipse Rcpp RcppArmadillo]; }; + GMCM = derive2 { name="GMCM"; version="1.4"; sha256="13ds8da7lqkvm1mz75440hmn9smi9pznb8bknmckg8vd3fc70f6x"; depends=[ellipse Rcpp RcppArmadillo]; }; GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; GMDH2 = derive2 { name="GMDH2"; version="1.5"; sha256="0y132zc8q4daj4856xikp4xvrqcibmn9r2shnmwpwxnfbik2ikfb"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; GMDHreg = derive2 { name="GMDHreg"; version="0.2.0"; sha256="07qk9jbav9gm3gh3ag7nz273iab5zlkn0yz31zs2hw646ik1yn14"; depends=[]; }; - GMMAT = derive2 { name="GMMAT"; version="1.1.1"; sha256="07ypfgk8jd4aymmbcdvcwflj1avhv4yigyqsyq5sslmw94ld0n5z"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; + GMKMcharlie = derive2 { name="GMKMcharlie"; version="1.0.3"; sha256="1ncz3czjg1md1hfahc2403k33nby11ldlq0yixpjs4s8panwpgsb"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + GMMAT = derive2 { name="GMMAT"; version="1.1.2"; sha256="1xifcm6kv4v3hw4zskggifd16cn1v7cmnwsgwjfbgrgz3qvyac5c"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; GMMBoost = derive2 { name="GMMBoost"; version="1.1.2"; sha256="01q165vkdiv4qh96lha0g2g94jpnzdclbby6q43ghh9j1yrd4qzj"; depends=[magic minqa]; }; GMSE = derive2 { name="GMSE"; version="0.4.0.11"; sha256="1by65202swxcj453q3frac02b2lwny1mm1i95vcjhkqihqkffl2z"; depends=[shiny shinydashboard shinyjs]; }; GMSimpute = derive2 { name="GMSimpute"; version="0.0.1.0"; sha256="1hmn5ss81df9j9ibgibs95j98irqzif94vq0c861mq4a65y59fcp"; depends=[ggplot2 glmnet reshape2]; }; - GNAR = derive2 { name="GNAR"; version="0.3.6"; sha256="0ijl150f66hras89k0nxz7r8ws638x8rdglcia73b7wmmjmgdfid"; depends=[igraph wordcloud]; }; + GNAR = derive2 { name="GNAR"; version="1.0"; sha256="0iv82f118b54g09dc5ggr2z793dgjhxj22v05kypz5fnbdxcl5qf"; depends=[igraph wordcloud]; }; GNE = derive2 { name="GNE"; version="0.99-2"; sha256="16mivsa4r8d2cg5qsh5rpg2244f74zk2ln3vbys7ivjgnjpjn7z8"; depends=[alabama BB nleqslv SQUAREM]; }; GOFShiny = derive2 { name="GOFShiny"; version="0.1.0"; sha256="04m08d9w8qqbql86c18qpnwym7agry8wspfwrnbbyp52h2pn2gxb"; depends=[rhandsontable rmarkdown shiny]; }; GOGANPA = derive2 { name="GOGANPA"; version="1.0"; sha256="1xbir21zvr5hv2y6nndzpsrpmnr7glrc7y6xgcyb856wx46ajan9"; depends=[GANPA WGCNA]; }; @@ -1574,12 +1596,12 @@ in with self; { GPoM_FDLyapu = derive2 { name="GPoM.FDLyapu"; version="1.0"; sha256="1hpgiwh7b50gazp1msjsh2840b91wfrxhl2l45lxg6jr1m34q8pj"; depends=[deSolve GPoM]; }; GPrank = derive2 { name="GPrank"; version="0.1.4"; sha256="06j5fk427jkp5lphqlx48vfp4fagnxxnv4iyjcha8nvkswcblwgy"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; - GPvecchia = derive2 { name="GPvecchia"; version="0.1.0"; sha256="0fldgvhp3634p7pdsjl2b97p79vdar2p6cqg8xvibdi88vbnf3wr"; depends=[BH fields FNN GpGp Matrix Rcpp RcppArmadillo sparseinv]; }; GRANBase = derive2 { name="GRANBase"; version="2.5.0"; sha256="1sc7f47dnrwww89v4n8y41zvc9z8i8lv7qgya6nwf98vh9b6ifmi"; depends=[covr dplyr GRANCore htmlTable jsonlite markdown RCurl sendmailR stringi switchr]; }; GRANCore = derive2 { name="GRANCore"; version="0.2.3"; sha256="1f3f34pk0y12yv9cl84ggg40p0bam0x48avrk5f56jskfr475kqk"; depends=[switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.1"; sha256="1jzvf45ch8x8f2x9kmvv02xz9bix5vplh8143vc4m1yyq42x09c6"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GROAN = derive2 { name="GROAN"; version="1.2.0"; sha256="14n3k1wwz5pn82wcj00cdns4bp699f58k1nj8hp8jn0q7xr2sgv5"; depends=[plyr rrBLUP]; }; + GRPtests = derive2 { name="GRPtests"; version="0.1.0"; sha256="1l03rr20xbl6gdj8k3rmmj13basnbmkl80hphldcnmg5iklyqyha"; depends=[glmnet MASS randomForest RPtests]; }; GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; }; GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; }; GSA = derive2 { name="GSA"; version="1.03.1"; sha256="05x9wspah1cdznjpncqam1iawsxdiigyl8v2anyhss2k7wwd94p1"; depends=[]; }; @@ -1593,6 +1615,7 @@ in with self; { GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; GSODR = derive2 { name="GSODR"; version="2.0.0"; sha256="1z8j6filfbqc83z495lw3qwwvd3xm35p7r00n74h9qabgvpydycd"; depends=[countrycode curl data_table future_apply httr R_utils]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; + GSelection = derive2 { name="GSelection"; version="0.1.0"; sha256="052vh1haxlzbh3c5i24nrwphapik1y8ribmh6q4axd447ggc0ff9"; depends=[gdata penalized SAM]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; GUIDE = derive2 { name="GUIDE"; version="1.2.7"; sha256="0klaczmn3jnlzyh45yaqlc897irjfk467f4w03awmflaiwan3h6v"; depends=[rpanel tkrplot]; }; GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; @@ -1603,8 +1626,9 @@ in with self; { GVARX = derive2 { name="GVARX"; version="1.1"; sha256="1y0v2qvrxhpjm6qi5h5safncqdm1ad2sgydrvi46jq613x99zynh"; depends=[lmtest lubridate sandwich strucchange urca vars xts]; }; GWAF = derive2 { name="GWAF"; version="2.2"; sha256="11lk1dy24y1d0biihy2aypdvlx569lw1pfjs51m54rhgpwzkw6yd"; depends=[coxme geepack lme4]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; + GWASbyCluster = derive2 { name="GWASbyCluster"; version="0.1.7"; sha256="0ivlkxbh8m23vbnjfmhk0vfczd5b8lzy9w4gm1m6jpvdm40kn70x"; depends=[Biobase limma rootSolve snpStats]; }; GWASinlps = derive2 { name="GWASinlps"; version="1.2"; sha256="036lv8f58kz6qdwaviyk1q1qsgcj9cimipq1cjrfpn8snkn7s1gh"; depends=[horseshoe mombf speedglm]; }; - GWASinspector = derive2 { name="GWASinspector"; version="1.2"; sha256="1y7411n14fm1nnmp3hr80cgqd42mka9rkbx0hdpi2h82giqik7ms"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr rmarkdown RSQLite]; }; + GWASinspector = derive2 { name="GWASinspector"; version="1.3.4"; sha256="1kx44ld47y3w2dkx88pzsk85aqamly84bm3qvzmjf4amz2kxsc6c"; depends=[data_table futile_logger ggplot2 gridExtra hash ini kableExtra knitr rmarkdown RSQLite]; }; GWEX = derive2 { name="GWEX"; version="1.0.1"; sha256="1bpjygx38rkicya37x6d88k34yc0ysr3pyfp4ci5px1xsic5cpmy"; depends=[abind doParallel EnvStats fGarch foreach lmomco MASS mvtnorm nleqslv Renext]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.2.2"; sha256="1nm4w5m4ca6npmpvh9nb0cnrbzlyv95nvvhgs3pqcrw4igagm4hj"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; @@ -1621,7 +1645,7 @@ in with self; { GeNetIt = derive2 { name="GeNetIt"; version="0.1-2"; sha256="0frrbakgnng52fvf912rywmcay2ncc01akb6jw9hlixn2qjr0rr1"; depends=[nlme raster rgeos sp spatialEco spdep velox]; }; GenAlgo = derive2 { name="GenAlgo"; version="2.1.5"; sha256="0d3y9kc2njsbzdngv67d4qrdsnn7nsxph5acc09vmwxpv1cyhxiw"; depends=[ClassDiscovery MASS oompaBase]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.0-2"; sha256="1ps1rq8cjlwh658mysdh3xbn5fihanzcwxb38xvg4031vnwv80in"; depends=[]; }; - GenEst = derive2 { name="GenEst"; version="1.3.2"; sha256="00g7f94f8db22zgs972a0j07w3ri5ga09436x5bhj3zng7yfagjm"; depends=[corpus DT gsl gtools htmltools lubridate matrixStats mvtnorm Rcpp shiny shinyjs sticky survival]; }; + GenEst = derive2 { name="GenEst"; version="1.4.0.1"; sha256="14scdz77vm5lfzvjqhhczlyyyv1iwqv9i3pssd5f7f7mw6ig16qd"; depends=[corpus DT gsl gtools hellno htmltools lubridate matrixStats mvtnorm Rcpp shiny shinyjs sticky survival]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; GenOrd = derive2 { name="GenOrd"; version="1.4.0"; sha256="17mfrj1fwj8mri1w0bl2pw1rqriidmd67i7gpn9v56g9dzw5rzms"; depends=[MASS Matrix mvtnorm]; }; @@ -1636,7 +1660,7 @@ in with self; { GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; GeneralisedCovarianceMeasure = derive2 { name="GeneralisedCovarianceMeasure"; version="0.1.0"; sha256="02s1wbsdp5ma4pnmcsdl5dwm156zx12d3n1ypzkc33lxg21ashzj"; depends=[CVST kernlab mgcv xgboost]; }; GeneralizedHyperbolic = derive2 { name="GeneralizedHyperbolic"; version="0.8-4"; sha256="01gqfvmzfslhxdnigzbl3rd55hk6r0kgd8fm9xjl0kb9vmb735lm"; depends=[DistributionUtils MASS]; }; - GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.1.5"; sha256="0a4wpn1zqw1aiygin43lrq55kb7z6macgi2hl5vng9wnx2gl9jiq"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + GeneralizedUmatrix = derive2 { name="GeneralizedUmatrix"; version="1.1.6"; sha256="1s0bn3y0s541v4wzh7rh82cakxcx3i6aff6x1g9m7jan5q9c1gac"; depends=[ggplot2 Rcpp RcppArmadillo]; }; GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GenoScan = derive2 { name="GenoScan"; version="0.1"; sha256="0p98imfvvz7l94kim3pxypyjs2pbxng4a2nagbafbady82ylr2vi"; depends=[data_table MASS Matrix seqminer SKAT]; }; GenomicMating = derive2 { name="GenomicMating"; version="2.0"; sha256="02v1pkarmardf7g8hf2n4jj4cq4707g5lcc7gnwsiyyh7pknd1y6"; depends=[dplyr emoa kohonen LowRankQP magrittr plotly qtl Rcpp RcppArmadillo scatterplot3d SOMbrero]; }; @@ -1655,6 +1679,7 @@ in with self; { GetDFPData = derive2 { name="GetDFPData"; version="1.5.2"; sha256="1xa1dy1lm4v2lch3qmfa990bx8r1qzch7jkpnydlnzmd0qmcbvb4"; depends=[curl dplyr lubridate readr reshape2 stringr tibble xlsx XML]; }; GetHFData = derive2 { name="GetHFData"; version="1.7"; sha256="05xmr880n6arvpn6lb51yn9qssc8594rsxp6cinshk2jh6hq4fnj"; depends=[curl dplyr lubridate RCurl readr stringr]; }; GetLattesData = derive2 { name="GetLattesData"; version="1.3.1"; sha256="1rq89110qgfi9v47pqahrzzcmh26r1724sgb8bbccsrydfscf994"; depends=[curl dplyr readr stringdist stringr XML]; }; + GetQuandlData = derive2 { name="GetQuandlData"; version="0.1.0"; sha256="1g1as4m853ab1wp57rzqm0552g0vm7kxzypibv0xywc85084pnmc"; depends=[dplyr jsonlite memoise purrr readr scales stringr]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; GetTDData = derive2 { name="GetTDData"; version="1.4.2"; sha256="1qz75hq1c89riq0jpzjkr9gbk5y7894kb0ydhdyji7kjl1kvgyvx"; depends=[bizdays curl RCurl readxl rvest stringi stringr tidyr XML xml2]; }; GetoptLong = derive2 { name="GetoptLong"; version="0.1.7"; sha256="1fl3w2n602ldybc5qj7qw4xmzzb804bsjkqwf6dswzj0vf0qiadr"; depends=[GlobalOptions rjson]; }; @@ -1667,7 +1692,7 @@ in with self; { GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.5"; sha256="1mswjy9fvrgn5353w1mnkmbr98bn1jdinsyc50ygy42z7sd4ijp2"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; GiniDistance = derive2 { name="GiniDistance"; version="0.1.0"; sha256="0jq1dwpsvh3k25lawvzf9ij72jsspzyqsbnrphz8aqwi1dkm3851"; depends=[energy randomForest Rcpp RcppArmadillo readxl]; }; GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; - GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.1.0"; sha256="0qjh4j5lpc83akr9gwpmr5wwdl8lak4ri2q1j658a98mkydn3b74"; depends=[assertthat dplyr ggplot2 magrittr MASS purrr rlang statmod stringr]; }; + GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2"; sha256="1bbxn8y17dk0n497fvfjl84ssn5qnp5kxlmqzzhzs264vvxfbz0l"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr rlang statmod stringr tweedie]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; GlobalOptions = derive2 { name="GlobalOptions"; version="0.1.1"; sha256="0x89hfz80avq4zcskxl71i4zi0mgniqqxfrvz050aa2189wfyja2"; depends=[]; }; @@ -1689,7 +1714,7 @@ in with self; { GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.2"; sha256="1x3hnyqq75krlygg82qm0ldd8nsv071nzgr63zkjmifc7hgi0nvb"; depends=[GreedyExperimentalDesignJARs rJava]; }; GreedyExperimentalDesignJARs = derive2 { name="GreedyExperimentalDesignJARs"; version="1.0"; sha256="14i6m5qlh1fca9xmzid01hicd3bkf6rzl139ss78gvw544zrapw7"; depends=[rJava]; }; GreedySBTM = derive2 { name="GreedySBTM"; version="1.0"; sha256="1r29cd8nxpyc82rz2xb9mk9wc17gcdlcl9lw1j3y4npr2z0qhf13"; depends=[Rcpp RcppArmadillo]; }; - Greg = derive2 { name="Greg"; version="1.3.1"; sha256="1ljd42d8fp4bnhrx26bl1br49b0xp8zr8qp8yccpqgxp6qb6cixv"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; + Greg = derive2 { name="Greg"; version="1.3.2"; sha256="0df91kzhvcj85baz1z3kfih2kv2yvi8is4adpl4kx6nwfd2d3q82"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; GrimR = derive2 { name="GrimR"; version="0.5"; sha256="005ywc31yn1cs54kjlkrryw0s7zm8dqqfjkdlkm4s1sbc9r3mssz"; depends=[car]; }; GroupComparisons = derive2 { name="GroupComparisons"; version="0.1.0"; sha256="0fxgh1mksrfmd4yjrpxg3nfby5wyx75lj0shb5xrdzl7pxzh56ai"; depends=[car]; }; @@ -1713,6 +1738,7 @@ in with self; { HCD = derive2 { name="HCD"; version="0.1"; sha256="158szwhpxwj2dj7sibyh8l92dk9cmy6acapmk8wf5hmfybdpgbsh"; depends=[data_table data_tree dendextend irlba Matrix randnet RSpectra stringr]; }; HCR = derive2 { name="HCR"; version="0.1.1"; sha256="14s46dyw3ifp3pwwlcwbbl47i6hy2whjj1n65i28am5a33nycgha"; depends=[data_table]; }; HCT = derive2 { name="HCT"; version="0.1.0"; sha256="0p1bj0spqff8m27lvxdfhk8z1r1z04v1dsv7mqbjyzl07w005hk3"; depends=[rstan]; }; + HCTR = derive2 { name="HCTR"; version="0.1.1"; sha256="1hg8mpallwxpmamk6q8x87w5hlqqwvbahfw5zmr9pisiagbwcsay"; depends=[glmnet harmonicmeanp MASS ncvreg Rdpack]; }; HCmodelSets = derive2 { name="HCmodelSets"; version="1.0.2"; sha256="0nwr36jgmrfvr7kn71yyah80qv55dwj8zd2hpc4ixhi4kvpr372f"; depends=[ggplot2 mvtnorm survival]; }; HDCI = derive2 { name="HDCI"; version="1.0-2"; sha256="0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz"; depends=[doParallel foreach glmnet iterators lattice Matrix mvtnorm slam]; }; HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; @@ -1721,15 +1747,15 @@ in with self; { HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; HDMT = derive2 { name="HDMT"; version="1.0"; sha256="0a23g42a94k3ckhgw9h4g53rrklniw65lzgj20w9p9br154kranc"; depends=[cp4p fdrtool]; }; HDPenReg = derive2 { name="HDPenReg"; version="0.94.6"; sha256="08kjyr0lkc0x5hky0i11n6x4dm9az8lbs79c0lmz32qrf9rhayg9"; depends=[Matrix Rcpp rtkore]; }; - HDclassif = derive2 { name="HDclassif"; version="2.1.0"; sha256="1d79wki03yyr3hqz44xlx07msmxb59sm2mrq2za34fdbvvrmw58v"; depends=[MASS rARPACK]; }; + HDclassif = derive2 { name="HDclassif"; version="2.2.0"; sha256="1l5zxhayhzh7q50ycl481hy0br66ylxyvzw1ahmjjrdkm8s3czyj"; depends=[MASS rARPACK]; }; HDclust = derive2 { name="HDclust"; version="1.0.3"; sha256="18l4qp261gj3kscfxs3s03kmb9y5ml31vnpgpm1iy125bks4mr2y"; depends=[Rcpp RcppProgress Rtsne]; }; HDcpDetect = derive2 { name="HDcpDetect"; version="0.1.0"; sha256="0ai35d9df5pmva52sb1rr20f11h0mbal6d179g865b7w6n90kfr1"; depends=[]; }; HDoutliers = derive2 { name="HDoutliers"; version="1.0"; sha256="0pby640bad0jcf1lkwg2g6flassb1pimnjm411c6x8rgvmiphc23"; depends=[FactoMineR FNN mclust]; }; HDtest = derive2 { name="HDtest"; version="2.1"; sha256="1c9x4s59762sp7drbm5h1xv22kpifq7p0x3dkrfcd0ficbbma5v8"; depends=[checkmate clime doParallel expm fastclime foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; - HEMDAG = derive2 { name="HEMDAG"; version="2.4.8"; sha256="01hi05hfsgg08r00ir6dkmmznc6813csbkwbrkkh7n8943cs9n52"; depends=[doParallel foreach graph iterators plyr precrec preprocessCore RBGL]; }; + HEMDAG = derive2 { name="HEMDAG"; version="2.6.0"; sha256="0mrxwm1a1axdm80by9xx0m3fla2v6sigcfiq3p9j7zg2myhk1bn9"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; HETOP = derive2 { name="HETOP"; version="0.2-6"; sha256="1fjwyqh7l296pghmc4m81q8icgbhvqvxr61zd638fr46gls3ky2p"; depends=[R2jags]; }; - HGNChelper = derive2 { name="HGNChelper"; version="0.7.1"; sha256="1yfgragyp6zfzm7aq74r9gkzqlrzggw87msm9cqqqy62a8y9y92w"; depends=[]; }; + HGNChelper = derive2 { name="HGNChelper"; version="0.8.1"; sha256="0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"; depends=[]; }; HGSL = derive2 { name="HGSL"; version="1.0.0"; sha256="1p453xr3d1bmqc6mrmzb0hz9p0gp25m6v6qr0l3bapcf71vzbvq1"; depends=[]; }; HH = derive2 { name="HH"; version="3.1-37"; sha256="15b03jbch8l2l5mhacn02asf5mr97pp4sk9p4k50s4hzlqkz5gnm"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; HHG = derive2 { name="HHG"; version="2.3.2"; sha256="159bs5cxdm770h66fam48451n9krpw2fn5gr397h730x2w7l41ki"; depends=[Rcpp]; }; @@ -1752,7 +1778,7 @@ in with self; { HMMpa = derive2 { name="HMMpa"; version="1.0.1"; sha256="0c3jmvcklywqsjmskx7zbw4d3l8i6bzr5h741v8iwgyw67mjn37g"; depends=[]; }; HMP = derive2 { name="HMP"; version="2.0.1"; sha256="0233p7gajr2aic0c5snni4g9v1bwn4zd5i3kagxhqxa3mvy5c7wc"; depends=[dirmult doParallel foreach ggplot2 gplots lattice MASS rpart rpart_plot vegan]; }; HMPTrees = derive2 { name="HMPTrees"; version="1.4"; sha256="1jha64iyb0816rdg2i3z7i31z02r72k6acmvw0ibw3sli8zcvphb"; depends=[ape dirmult doParallel foreach HMP]; }; - HMR = derive2 { name="HMR"; version="0.4.2"; sha256="0rbpghih99avaq803f6hb66pfbqgzh1i2yaqs0mhbj61yyjzyb7b"; depends=[]; }; + HMR = derive2 { name="HMR"; version="1.0.0"; sha256="128q3d8r3z9gwnhqszwj8z0kf4la7szkwd11a6x0yhglmyrs1905"; depends=[]; }; HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; }; HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; HRM = derive2 { name="HRM"; version="1.0.2"; sha256="0krd27raa2ys2gsgqpbxpfnmigj8s6mk3al7fh3czx5l0d73iqy1"; depends=[data_table doBy ggplot2 MASS matrixcalc mvtnorm plyr pseudorank Rcpp reshape2 xtable]; }; @@ -1767,6 +1793,7 @@ in with self; { HSPOR = derive2 { name="HSPOR"; version="1.1.9"; sha256="06lr8l71y5fcqcnmgq7cgiab1pcc98wnqzndbxcbikbh33cx7nxv"; depends=[corpcor npregfast]; }; HSROC = derive2 { name="HSROC"; version="2.1.9"; sha256="0x5q115c1js5l4rvdy8fg52kcgl18aj1snlj0gi1fdvjsxvglxjl"; depends=[coda lattice MASS MCMCpack]; }; HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; }; + HTLR = derive2 { name="HTLR"; version="0.4-1"; sha256="0v6mbs57s5m7ab6zbaafp01lk4q7k1aldgrwq0rmqrzsq2rsar51"; depends=[BCBCSF glmnet magrittr Rcpp RcppArmadillo]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; HTSSIP = derive2 { name="HTSSIP"; version="1.4.1"; sha256="1j2f6f3i4di4bvsk44gxz0narg45ld2rahfn23wpgni5bszy0vb3"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; @@ -1787,12 +1814,10 @@ in with self; { HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; HellCor = derive2 { name="HellCor"; version="1.2"; sha256="1k7k8gj70wc31w27gykiy0fv2bs9q73414ma0hn3ziqg4cnrgl7m"; depends=[energy]; }; - HelpersMG = derive2 { name="HelpersMG"; version="3.7"; sha256="0j91d8zb6w9mzd92zvzr6jws9rjdna4p1szd772vg6bk1f95q47v"; depends=[coda lme4]; }; + HelpersMG = derive2 { name="HelpersMG"; version="3.8"; sha256="1vlhdry53ync1fha347ffn1jvk89nxnhc2k0r3aykglbaypfwbcr"; depends=[coda lme4]; }; HeritSeq = derive2 { name="HeritSeq"; version="1.0.1"; sha256="0l1saxwj99xwkzcy43v0k9sicqwpw9gc8ywxpablagcddfj05pi3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; HextractoR = derive2 { name="HextractoR"; version="1.4"; sha256="1wp7n92wgrjyklq159ymrw8y5ads6lhj2fcz54rzdnccdyx5naxi"; depends=[doParallel foreach seqinr]; }; - HiCblock = derive2 { name="HiCblock"; version="1.5"; sha256="1c17bdwflfg83d73kd09dgj17nmdbc6cd9fz9dm6q8xvrcvcc6r3"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; HiCfeat = derive2 { name="HiCfeat"; version="1.4"; sha256="1imz7zfax74aakzk8457jww9r66qxpr2ncyvjj0y5paxdn76lnnq"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; - HiCglmi = derive2 { name="HiCglmi"; version="1.4"; sha256="122f862aaxl9fc6csars8h20sf2q2hmfa7vfa0p67dbknzx76hi4"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; HiClimR = derive2 { name="HiClimR"; version="2.1.4"; sha256="1ynxy5c2md3bpii3693zcxabldaj0s54xby19j0f616hk4kjm3gm"; depends=[ncdf4]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; @@ -1806,20 +1831,21 @@ in with self; { HistData = derive2 { name="HistData"; version="0.8-4"; sha256="0qw8jrh7g9w49k6f8hsg9wvy8ms2pcsmiv2ysxfcr89v60q084rb"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; HiveR = derive2 { name="HiveR"; version="0.3.42"; sha256="09h061511pk7iy1k9gb3ifa5q6gd17ix9sn2fshl6gp5sxnysn4f"; depends=[jpeg plyr png RColorBrewer rgl tkrgl]; }; - Hmisc = derive2 { name="Hmisc"; version="4.2-0"; sha256="1n8i2jhc308hd6bvys9cd7nrz7pwjszs03r5bwlh1pc869ki95ly"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + Hmisc = derive2 { name="Hmisc"; version="4.3-0"; sha256="0rb1m6138lqzb46nss9ggvhghipd10vdnwsy6iq2wzynrynzkwkz"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; + Hmsc = derive2 { name="Hmsc"; version="3.0-2"; sha256="19d1j425h2ylzfpb1a9yam2n82xd5gcyi843sn2x50z1gwv9kl64"; depends=[abind ape BayesLogit coda fields FNN ggplot2 MASS Matrix MCMCpack mvtnorm nnet pdist phytools pROC statmod truncnorm]; }; HoRM = derive2 { name="HoRM"; version="0.1.2"; sha256="0vfsya6423i25szdj5s8pa8pwshiqykikxdbbj7r2nz73x3qp6hy"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; HotDeckImputation = derive2 { name="HotDeckImputation"; version="1.1.0"; sha256="1mqfn6yw5846ynrcgzka0m6ikfppa5civjkhj42rhp2v2xk25li7"; depends=[Rglpk]; }; Hotelling = derive2 { name="Hotelling"; version="1.0-5"; sha256="1ism2lzi2kmi62gp319qsi64pj2kj5sfh50f1qnv8vgdkb76bdx5"; depends=[corpcor]; }; HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; - HyRiM = derive2 { name="HyRiM"; version="1.0.0"; sha256="1fh7y1abwz2cmdxviribfmdvkmd706p4mmf5myl84z7dbgqh6mgp"; depends=[compare orthopolynom]; }; + HyRiM = derive2 { name="HyRiM"; version="1.0.3"; sha256="0zx292554kr2s4107db5y7sr869kia9q6dyzhdjy11ksw23sj9m4"; depends=[compare orthopolynom]; }; HybridFS = derive2 { name="HybridFS"; version="0.1.3"; sha256="0sb3i8ymgydi9hvxzdzydqap1gd7w5qcrs9clc0y5n26zd2mwqm5"; depends=[caTools FSelector InformationValue ROCR woeBinning]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; HydeNet = derive2 { name="HydeNet"; version="0.10.9"; sha256="1glzbr91cwp99qk1cyf8824fg8jvghgf84gc64jjn2q70vczcf5f"; depends=[checkmate DiagrammeR dplyr magrittr nnet pixiedust plyr rjags stringr]; }; HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; - HypergeoMat = derive2 { name="HypergeoMat"; version="1.0.1"; sha256="08cbx62n0r1l0ss6dkpwg4nam36xikmfh4w551pjp21f3ybvzql3"; depends=[arrangements gsl]; }; + HypergeoMat = derive2 { name="HypergeoMat"; version="3.0.0"; sha256="03xnvb7d80nak7wawfi2sniq9syjbjx5gk71xsgchgwqsdnixp8y"; depends=[gsl Rcpp RcppArmadillo]; }; IAPWS95 = derive2 { name="IAPWS95"; version="1.1.0"; sha256="03kggkcyvbgh7l9haa1ljg0sv6f2rs06r6j0w2x7cpm31qmc3yzl"; depends=[ggplot2 pander Rcpp]; }; IASD = derive2 { name="IASD"; version="1.1"; sha256="1slhd42k639mbyxccl7n69p7ng2qx6pqag8wz3kdwn479spkavzn"; depends=[]; }; IAT = derive2 { name="IAT"; version="0.3"; sha256="110rn2q09gspfd4msyh30dllxdxdraffkr18h1nm72brzhmx9cfi"; depends=[dplyr ggplot2 lazyeval]; }; @@ -1863,7 +1889,7 @@ in with self; { IDF = derive2 { name="IDF"; version="1.1"; sha256="19fx04gvzwzkxbd453l3wx46s22dbnh0nxdrmsr4f7l67kihbwdr"; depends=[evd ismev]; }; IDPSurvival = derive2 { name="IDPSurvival"; version="1.2"; sha256="0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw"; depends=[gtools Rsolnp survival]; }; IDPmisc = derive2 { name="IDPmisc"; version="1.1.19"; sha256="13qcvfm703frs367paddz1wq9k3p17f9p5347m56bhky5hjkaphd"; depends=[lattice]; }; - IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.5"; sha256="05wxymvv1p7dik5y227qnp4w1lpdmqfp17zrk6iah8gyv9yjsvbh"; depends=[doParallel foreach igraph spatstat]; }; + IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.10"; sha256="1980nsbcibsas99xcqfc54k6zhh9lg2xdgmihp846xhqgw9xjjy7"; depends=[doParallel foreach igraph spatstat]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; IDmeasurer = derive2 { name="IDmeasurer"; version="1.0.0"; sha256="0n7rziaaxm9dqixmw6rxgq9dwnwdl3dsdnpd9s59k5skdlaxnl5m"; depends=[infotheo lme4 MASS]; }; IDmining = derive2 { name="IDmining"; version="1.0.6"; sha256="0fsl1byz0n5jwswh2ydzz5lsycja54545cf7dr1r3h1a372yz2mv"; depends=[data_table doParallel foreach]; }; @@ -1888,9 +1914,11 @@ in with self; { INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; }; INDperform = derive2 { name="INDperform"; version="0.2.1"; sha256="02zqrb9hnfvwxni2477fjdx3ii0a0wbm1layskmwlzsvvkc60ngn"; depends=[cowplot dplyr ggplot2 htmlwidgets jsonlite lazyeval magrittr mgcv nlme purrr RColorBrewer rhandsontable rlang shiny stringr tibble tidyr vegan]; }; INLABMA = derive2 { name="INLABMA"; version="0.1-11"; sha256="0wzyb3c7zpksqz198kigi4rpblvk0rjamngmyabw5xdpizxdg6zi"; depends=[Matrix sp spdep]; }; + INLAMSM = derive2 { name="INLAMSM"; version="0.1"; sha256="0km7kwwif2hqqa9jhglvkinzcm6gfp7mn219hqm5ds5rfgrcyl75"; depends=[Matrix MCMCpack]; }; INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; IOHanalyzer = derive2 { name="IOHanalyzer"; version="0.1.1"; sha256="0imjmhvasfshb3z4cpcjrvmwdc668i73bagl7iww7vhfn3y7mk4n"; depends=[bsplus colorRamps colorspace colourpicker data_table dplyr DT ggplot2 magrittr markdown plotly RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs withr]; }; IPCAPS = derive2 { name="IPCAPS"; version="1.1.5"; sha256="0d1nws86k1yph2f4drwrh4jvmmc9nnqmmswpwirmgsp3ma58kc42"; depends=[apcluster expm fpc KRIS LPCM MASS Matrix Rmixmod]; }; + IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.0"; sha256="0rx1xwbdmv23r62xjf8ksbwmr7axxp7a9brd6c7g8qv3ayjjy706"; depends=[dplyr eeptools GlobalOptions lubridate testthat]; }; IPEC = derive2 { name="IPEC"; version="0.1.2"; sha256="1fglr5hs61n13251145wqzvxy362fx32yzral96xd8li76ljxiic"; depends=[MASS numDeriv]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; @@ -1900,8 +1928,8 @@ in with self; { IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; - IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.2.0"; sha256="08r07z9z2mmx2w2xx2qpdvllwz85wmk3pwid77avc7vrvbbvgs6g"; depends=[dplyr IRISSeismic RCurl seismicRoll signal stringr XML]; }; - IRISSeismic = derive2 { name="IRISSeismic"; version="1.5.1"; sha256="1xwhhj7p8pfvz5f592kldcfhsizww6xrcp48xda924hd8dvbm585"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; + IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.3.0"; sha256="09nzzalz107l6dscl4xxd8znwd9fppjlfyvn1vfd9jhx7mkjlnlq"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; + IRISSeismic = derive2 { name="IRISSeismic"; version="1.5.2"; sha256="117p2kh2r2iw758iqlpqaak83czfv34p15907g18x496r5vri429"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; IRdisplay = derive2 { name="IRdisplay"; version="0.7.0"; sha256="12chk53nf4zckgc4yl7gbvd7m5dvli52inp5b3f0zvcjvfncksli"; depends=[repr]; }; @@ -1929,9 +1957,11 @@ in with self; { ImaginR = derive2 { name="ImaginR"; version="0.1.7"; sha256="12ypfrqw6xym84i1axd3h0qd2md96rc0glas3rgzpdhdyw4lbfmn"; depends=[imager jpeg]; }; Imap = derive2 { name="Imap"; version="1.32"; sha256="0b4w0mw9ljw6zxwvi0qzb08yq9n169lzgkdcwizrd07x9k9xjxs7"; depends=[]; }; Immigrate = derive2 { name="Immigrate"; version="0.0.2"; sha256="1khxjh4lpsgv5qqk30ry6r8y3vjblwxsx9frv63pws4x1j6j2apm"; depends=[pROC Rcpp]; }; + ImpactEffectsize = derive2 { name="ImpactEffectsize"; version="0.2.0"; sha256="0vy32jypakpf65zqblpyxfym81kqvqikycyhgar0ms26l4fczaqz"; depends=[AdaptGauss caTools matrixStats parallelDist RcppAlgos]; }; ImpactIV = derive2 { name="ImpactIV"; version="1.0"; sha256="1bb6gw1h15hscr71hy779k2x5ywzx63ylim3hby02d7fnnj46p58"; depends=[nnet]; }; ImportExport = derive2 { name="ImportExport"; version="1.1"; sha256="12i9mwspk59zicn1mn21xrs90c8dqxm1q7alqbzscgkpf3xbjrnn"; depends=[chron gdata haven Hmisc RODBC xlsx]; }; ImputeRobust = derive2 { name="ImputeRobust"; version="1.3-1"; sha256="1zvwlpffpm4gqysz57clf8jkqr72yjbzx90pdy95la51m0b6cdbd"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; + InDisc = derive2 { name="InDisc"; version="1.0.2"; sha256="1mvd6r1ly924n17275n4i9p8sghvm929kbir0bq6850kk2m0dgq7"; depends=[optimbase psych]; }; InPosition = derive2 { name="InPosition"; version="0.12.7.1"; sha256="0d9c7dwaa1v0j8p5ff9223fc2gkbmbvyqylma2d8l4x5m92jmkv0"; depends=[ExPosition prettyGraphs]; }; InSilicoVA = derive2 { name="InSilicoVA"; version="1.2.5"; sha256="1irbfdrab9mz50py8h3gnjj14swh7b1pbrqf2fj04ym206rsca02"; depends=[coda ggplot2 InterVA5 rJava]; }; IncDTW = derive2 { name="IncDTW"; version="1.1.2"; sha256="1w213d4z3fflkhcr1snsgy3l9vam0bslzc8h59gfphpjyf9h3hz8"; depends=[data_table ggplot2 Rcpp RcppArmadillo RcppParallel scales]; }; @@ -1939,8 +1969,9 @@ in with self; { IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; }; IndepTest = derive2 { name="IndepTest"; version="0.2.0"; sha256="017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p"; depends=[FNN mvtnorm Rdpack]; }; IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; }; - IndexConstruction = derive2 { name="IndexConstruction"; version="0.1-1"; sha256="16swmbkb6shxl0vxby4pi246ji7qqb849nzqr4pbdg4gdg1a36f5"; depends=[fGarch KernSmooth lubridate RcppBDT xts zoo]; }; + IndexConstruction = derive2 { name="IndexConstruction"; version="0.1-2"; sha256="16fwbq4d9k3092qwj7yk2s66gp8rgv7g0ii4240imfjh28zlb6xa"; depends=[fGarch KernSmooth lubridate RcppBDT xts zoo]; }; IndexNumR = derive2 { name="IndexNumR"; version="0.1.2"; sha256="0dip7v4z36k3fhl8szrbl11gcqy1rr7kgmcsajpdwd16jixj1d27"; depends=[]; }; + IndexNumber = derive2 { name="IndexNumber"; version="1.0"; sha256="03c01f7pk0bf1mlnfmnyc242gpc0ac6svzb6lfwhqkv964kdvhsy"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; InferenceSMR = derive2 { name="InferenceSMR"; version="1.0"; sha256="13d3v8kyk6br33659jgql6j1nqmnd8zszqrwfw2x3khkiqzgdmhk"; depends=[survival]; }; @@ -1960,8 +1991,8 @@ in with self; { IntegratedJM = derive2 { name="IntegratedJM"; version="1.6"; sha256="0fv24z7vidhn09ljk09pjzkrlg2rlwxcrhfjc53ybjjgsgay99z6"; depends=[Biobase ggplot2 nlme]; }; IntegratedMRF = derive2 { name="IntegratedMRF"; version="1.1.9"; sha256="0kklgc48cib4bjfs9qbw13nkp8xyjdazrg6z15x69jylnxyakic7"; depends=[bootstrap ggplot2 limSolve MultivariateRandomForest Rcpp]; }; InterSIM = derive2 { name="InterSIM"; version="2.2.0"; sha256="14yccan88szf26w1hg1lkvmssids961gng7il3bjr2f1l0k8vd3b"; depends=[MASS NMF]; }; - InterVA4 = derive2 { name="InterVA4"; version="1.7.5"; sha256="0la99ylx8fnn4kpqa364nhs12y2hzp3sm0awsx5sfdv6n7m9js33"; depends=[]; }; - InterVA5 = derive2 { name="InterVA5"; version="1.0.2"; sha256="0mjfvkpnl46kzas6ch8x3liffqixifdrdjc7vxfyc1a4az7kn8vq"; depends=[]; }; + InterVA4 = derive2 { name="InterVA4"; version="1.7.6"; sha256="02fci1p8im8jpalv1mbrhrwhvpi23mzhwhpd1knpxyv7h6l9x0kg"; depends=[]; }; + InterVA5 = derive2 { name="InterVA5"; version="1.0.4"; sha256="18gvqmyglssdm72hlrv0nmk8yxavyj6q89dlw62zybcpvns6q3ba"; depends=[curl readxl]; }; Interact = derive2 { name="Interact"; version="1.1"; sha256="1g9zhafdpr7j410bi8p03d8x9f8m3n329x8v01yk15f65fp7pl1d"; depends=[]; }; InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.1"; sha256="1ljxgiia0y8wv1rlm5brd0yvs1r7r5wyrs6nykmwrwwya4k34mpz"; depends=[MASS tkrplot]; }; @@ -1971,10 +2002,10 @@ in with self; { InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="1.2"; sha256="1iaw4i14l2vp1f163g2q4pwv9cnqrx14ik4s8zw0iha4zwcrc3ja"; depends=[DBI doParallel enviPat foreach plyr Rdisop RSQLite]; }; IntervalSurgeon = derive2 { name="IntervalSurgeon"; version="1.0"; sha256="0dpgfgnnx6r29y8y3pac1rgi503wvlwggx5dh6fhqnxw5yfink61"; depends=[Rcpp]; }; IntrinioStockAPI = derive2 { name="IntrinioStockAPI"; version="0.0.1"; sha256="0gvkynyi2iag2kwwb51b8125md8kw65b48zk9qdf8pppg9s1r46a"; depends=[gtools httr jsonlite stringr]; }; - InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.7-2"; sha256="08s1jhyyb60cjk314q9n24niq55n21h83ml3q9a2xhr956kch8ms"; depends=[glmnet mboost]; }; + InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.8"; sha256="01ckyvjl9lxdpkr0v1da4n4lw3b5z1bxlmf0v6ibqly1mhfwybjl"; depends=[glmnet mboost]; }; InvasionCorrection = derive2 { name="InvasionCorrection"; version="0.1"; sha256="1wwx2kssjysl1lraac36pvxq34vg8qm0vwi861rs1iipfc35i84j"; depends=[lattice]; }; Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; }; - Irescale = derive2 { name="Irescale"; version="0.2.6"; sha256="1mxpcxc893ld196fb1hpy8avr6a1n4fi83fw2wmwdi11mdwib495"; depends=[e1071 ggplot2 Rcpp Rdpack sp]; }; + Irescale = derive2 { name="Irescale"; version="2.3.0"; sha256="037bzli0zwlfbf5xmllqg2pi0shs33ggrnw69kzyw2sf780y3hs2"; depends=[e1071 fBasics ggplot2 imager Rdpack reshape2 sp]; }; IrishDirectorates = derive2 { name="IrishDirectorates"; version="1.4"; sha256="1mwjrmqga7f0p5w2m4f0i6mb68jimx6791pz03r8iqj3yx0vzkh0"; depends=[Rcpp RcppArmadillo]; }; IrregLong = derive2 { name="IrregLong"; version="0.1.0"; sha256="0m0lzvdp3f57faylk5vihymyhya7b6kri01zql971lqmfazybjy8"; depends=[frailtypack geepack survival]; }; IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; }; @@ -1983,11 +2014,10 @@ in with self; { IsoCI = derive2 { name="IsoCI"; version="1.1"; sha256="0r7ksfic6p2v95c953s4gbzzclk4ldxysm8szb8xba1w0nx2izil"; depends=[KernSmooth]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="2.0.1"; sha256="1y101x7138pdylp2qsmyd10dh0d3wwic292qfi2kbn3z849dlhnn"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="3.0"; sha256="08lgv9jp10csiz56chlanhr2vwbzv0h3qfnizlqsgaall9bjkvhv"; depends=[MASS]; }; + IsoplotR = derive2 { name="IsoplotR"; version="3.1"; sha256="0xh45p2ky3hh5p01yw27y6y7iikr6fbwalmw3qbw1y6c5jc3978v"; depends=[MASS]; }; IsoriX = derive2 { name="IsoriX"; version="0.8.1"; sha256="0rr9frj0mhismls60vgax357jgfyq2wci7rvhvp70fh5k998mzid"; depends=[lattice latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-2"; sha256="0haqb8fsn1z532z42vjz60na7hlwv5rhayxzbd4rkzx2wcvnlbhn"; depends=[clue]; }; - JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; }; JBTools = derive2 { name="JBTools"; version="0.7.2.9"; sha256="0bynqn3daqgmi3l9asy34mfwyfjkn35k465dfqqi3xwx6cbzlg5k"; depends=[colorspace foreach gplots plotrix]; }; JFE = derive2 { name="JFE"; version="2.1.3"; sha256="16fbwi9znvf560vlrpdipg69vw1kyg2081iz1l2adc2wyxp81dda"; depends=[BurStFin fAssets fBasics fPortfolio FRAPO iClick MASS quantmod rugarch tcltk2 timeDate timeSeries xts zoo]; }; @@ -2002,14 +2032,15 @@ in with self; { JOP = derive2 { name="JOP"; version="3.6"; sha256="1kpb1dy2vm4jgzd3h0qgdw53nfp2qi74hgq5l5inxx4aayncclk7"; depends=[dglm Rsolnp]; }; JOUSBoost = derive2 { name="JOUSBoost"; version="2.1.0"; sha256="0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7"; depends=[doParallel foreach Rcpp rpart]; }; JPEN = derive2 { name="JPEN"; version="1.0"; sha256="12rvp5bmlkwyr1gg336k655hp09gym0d2wwry70c1rz30x1sf2zs"; depends=[mvtnorm]; }; - JQL = derive2 { name="JQL"; version="2.3.3"; sha256="0cg0d1rkdsvldh8rdhz2qjgb2dijqzwk3k4p20s40nd3nm9w5hm5"; depends=[caret pdist]; }; + JQL = derive2 { name="JQL"; version="3.6.9"; sha256="0d926hngv4r6zl5f6yai3jwhl9hql2hv6ja3yjgplglkns66g4lh"; depends=[caret pdist randomForest]; }; JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="0.1.3"; sha256="1p5vlk2fcrb42pi7srkymjacfg05vlaspvhaw94lq1rhvxdw87yl"; depends=[nlme Rcpp RcppEigen statmod survival]; }; JSmediation = derive2 { name="JSmediation"; version="0.1.0"; sha256="1qmjkachpvql0nrn7lf2n32w9zp12saha2y3zmdg086k1q12xifl"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; - JWileymisc = derive2 { name="JWileymisc"; version="0.3.1"; sha256="1683sq0fb8ms0kzfc46azkjfsk2khhq43y265k1g920s5pc7bn8q"; depends=[cowplot data_table devtools emmeans foreach ggplot2 ggthemes lavaan lme4 lmerTest MASS Matrix mgcv mice multcompView nlme psych quantreg rms robustbase VGAM zoo]; }; + JWileymisc = derive2 { name="JWileymisc"; version="1.0.0"; sha256="1hk10mcbp0abm9zy7233by0220knw0axs6xiw4axr4jcabwrzlim"; depends=[cowplot data_table emmeans extraoperators ggplot2 ggthemes lavaan lme4 MASS Matrix mgcv mice multcompView nlme psych quantreg rms robustbase VGAM zoo]; }; JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-3"; sha256="1zcs9qhf2216c590hj6qc837rnciyfsirg4zg655vxn59fgzpvyb"; depends=[Rcpp]; }; JamendoR = derive2 { name="JamendoR"; version="0.1.0"; sha256="1v5i4ggc4igp83pik32fqp07ff8iv7dp93b3qhxcsy1msa4l88lx"; depends=[dplyr httr jsonlite]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-1.1"; sha256="11knns2b1b8kd4nf8zwfzdhj4xqwkx3f1ba672vqi7jfr47938hh"; depends=[]; }; + Jaya = derive2 { name="Jaya"; version="0.1.9"; sha256="0b23l7xp4waxjy1vkk09xaali5axr5900v9hkki4f75wh4gb1l53"; depends=[GA]; }; Jdmbs = derive2 { name="Jdmbs"; version="1.3"; sha256="0jjnn1lrrakai34srp9ks8a563amd1rp9vd4ydnpmgfma5qlify0"; depends=[igraph png]; }; Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.3.0"; sha256="1vjxzbfs8a7kpmn2lb9dca67d4njmzjr3pl16s0r9ihmmxxwwili"; depends=[nlme]; }; @@ -2018,7 +2049,7 @@ in with self; { JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointNets = derive2 { name="JointNets"; version="2.0.1"; sha256="18n9dsy0w0nh7dznp6gw6g5fhhjhf5y589nb49hri0721kq1h3rb"; depends=[brainR igraph JGL lpSolve MASS misc3d oro_nifti pcaPP rgl shiny]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; - JuliaCall = derive2 { name="JuliaCall"; version="0.16.6"; sha256="17vwv2x8gzd92j1wrj36z05ljqz79pjpxsrjsbcf07mfcij0bkac"; depends=[knitr Rcpp]; }; + JuliaCall = derive2 { name="JuliaCall"; version="0.17.1"; sha256="0v0mn3q9mp8xq6bpm870v9a228b20n22cph3s0ngphni07pi0kwr"; depends=[knitr Rcpp]; }; JumpTest = derive2 { name="JumpTest"; version="1.1"; sha256="0y375m5477nq0ybnjmfnd8hi45d8jmdnprqvw5f70llpd7bcghh0"; depends=[MASS Rcpp RcppEigen]; }; JuniperKernel = derive2 { name="JuniperKernel"; version="1.4.1.0"; sha256="1zghlfwh4wsjjp7ldp5y86ffyzc27ccl5j9lcwlp1di9slaqjign"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; @@ -2037,14 +2068,14 @@ in with self; { KNNShiny = derive2 { name="KNNShiny"; version="0.1.0"; sha256="16zm8bhdivaap3mvhdx2qn1b1j2iqyarclb0y2qd1n4viwcfm9c1"; depends=[caret dplyr e1071 FNN psycho rhandsontable rmarkdown shiny]; }; KODAMA = derive2 { name="KODAMA"; version="1.5"; sha256="1pb7qba7dp25x4znhvihc21z5jk6bgk6sg0v24gbvqhv5irm7kwf"; depends=[Rcpp RcppArmadillo]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.2"; sha256="1vz0099gp1r10n7w4p480l8rswdw100sns196d9xin2ibmmd2fx9"; depends=[pheatmap]; }; - KONPsurv = derive2 { name="KONPsurv"; version="1.0.1"; sha256="0ycdzd88hy5n59p160fwpfhkq74p4j56cdahjr3c969sjml50zpi"; depends=[Rcpp survival]; }; + KONPsurv = derive2 { name="KONPsurv"; version="1.0.2"; sha256="0ylydb4qxf7apklgn8a2sjid92gfbswpn2fyhjjh9f972bg1vdmi"; depends=[Rcpp survival]; }; KRIG = derive2 { name="KRIG"; version="0.1.0"; sha256="1hpmjzzrh5b042xh14dgxvn5x5ini63vq5jz1i6rjgvsdf734f98"; depends=[Rcpp RcppArmadillo Rdpack]; }; KRIS = derive2 { name="KRIS"; version="1.1.1"; sha256="0v2xgdwd8lp399il6grjkysq2gj38fmjlxlvg5ciq3g3cp7cdy3m"; depends=[rARPACK]; }; KRLS = derive2 { name="KRLS"; version="1.0-0"; sha256="1zyf3smfzfm3n43i35rlj1w6vcip2hxkvk4f8lp77xbsry0gmwjw"; depends=[]; }; KRMM = derive2 { name="KRMM"; version="1.0"; sha256="0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk"; depends=[cvTools kernlab MASS robustbase]; }; KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; }; KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; }; - KSPM = derive2 { name="KSPM"; version="0.1.2"; sha256="1vgd7m0p65asj1v5b77zh6rv9vfbmxdc274mdya002nm9n8xn3gz"; depends=[CompQuadForm DEoptim expm]; }; + KSPM = derive2 { name="KSPM"; version="0.2.0"; sha256="0gysb4qb60xfixyj4slcxs2j1bn57vbq6j08i5ldfr9vfaf1pk0n"; depends=[CompQuadForm DEoptim expm]; }; KScorrect = derive2 { name="KScorrect"; version="1.4.0"; sha256="1khvwc610yp3fd4fn0wcgqpzxg9g7sicjjmwvfcahs8qxn3m5vfa"; depends=[doParallel foreach iterators MASS mclust]; }; KSgeneral = derive2 { name="KSgeneral"; version="0.1.1"; sha256="1ldk3fvwbr6hw7x3ydgzixgc41a0fbbic699zjlnpj5x4mjg1qby"; depends=[dgof MASS Rcpp]; }; KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.2"; sha256="1851cqsn8ghp29hjp3806hl66lqjnz3d69qkmpcmk5nky426ypdr"; depends=[]; }; @@ -2054,9 +2085,9 @@ in with self; { KbMvtSkew = derive2 { name="KbMvtSkew"; version="1.0.1"; sha256="0bbnsalyk6r5pzfpz7cniyck4ganm6jka6vijcrals5sxpg70w7x"; depends=[]; }; KenSyn = derive2 { name="KenSyn"; version="0.3"; sha256="0s8sq3caxn4swac81196dp52r9lbmxb3ni45yaxh53f5g34slsi8"; depends=[lme4 metafor nlme]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; - KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; }; + KernSmooth = derive2 { name="KernSmooth"; version="2.23-16"; sha256="1acrkbdn3a74y4dndkcdl1njnpfqz7gk3bsz03g8lfj8l7z53hmq"; depends=[]; }; KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.2"; sha256="1dm3j779y630hxdlxycwha563i3n9viil2ksq49s7m65bnwhj33k"; depends=[plotrix Rcpp rgl]; }; - KernelKnn = derive2 { name="KernelKnn"; version="1.0.9"; sha256="1y9s3y9r51rq8nz33glf767wjjclmj988rxw9r7rc9bw01dxkd7f"; depends=[Rcpp RcppArmadillo]; }; + KernelKnn = derive2 { name="KernelKnn"; version="1.1.0"; sha256="1w8k4b2q5bh0kx72ixrdb43aificl991j1akh00xn1zx3gbrjb0p"; depends=[Rcpp RcppArmadillo]; }; Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.1"; sha256="1mc3jzgmg8gyxs6kk474yz911abqzigxwjwjrmhipc40rrdmmr2z"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; Knoema = derive2 { name="Knoema"; version="0.1.16"; sha256="0v6w8rrw8nd4l1by5w9xd4hbxp55cma89kljha47ykvmnflsrjsc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; @@ -2089,7 +2120,7 @@ in with self; { LDRTools = derive2 { name="LDRTools"; version="0.2-1"; sha256="05srfyplsypi3whfa71lx7pnad23irpf0p7rxmrpv28jgdmrz6wf"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.2"; sha256="0lvk3xz400yd3w0cjdfi6hir1ym1mffd504vycwgck5fkzljpcvx"; depends=[]; }; LDheatmap = derive2 { name="LDheatmap"; version="0.99-7"; sha256="1r0j8bihi5z1x0sgaf7dwzpsw9i0nc1vylvipvc0cia2ka1lr9dc"; depends=[genetics Rcpp snpStats]; }; - LDlinkR = derive2 { name="LDlinkR"; version="1.0.0"; sha256="1ihwx67k83jn9fdhdkh991qypd84jrqygpiz8g9gnzhi2lzg8y5m"; depends=[httr]; }; + LDlinkR = derive2 { name="LDlinkR"; version="1.0.1"; sha256="1k7g7z78fs2pjx436x9z0ikldk0ma9yl503xbx5xwpmw9q6c769k"; depends=[httr]; }; LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; @@ -2099,6 +2130,7 @@ in with self; { LFDREmpiricalBayes = derive2 { name="LFDREmpiricalBayes"; version="1.0"; sha256="1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b"; depends=[matrixStats R6]; }; LGEWIS = derive2 { name="LGEWIS"; version="1.1"; sha256="1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r"; depends=[CompQuadForm geeM mvtnorm SKAT]; }; LGRF = derive2 { name="LGRF"; version="1.0"; sha256="1kdx6y55aa9n6v43zfz6jk8amvvxbx79sqm1jx4ihgkpgcdglan7"; depends=[CompQuadForm geepack SKAT]; }; + LHD = derive2 { name="LHD"; version="0.1.2"; sha256="13g90v9mz1lx8fcwkyy1mg722zsairsay2mr77x0m4drg99ikq6r"; depends=[]; }; LICORS = derive2 { name="LICORS"; version="0.2.0"; sha256="0p9y21k1mj1v397jpb5g6jiw7rpzbyfwr4kv2rp3lyxyasy2ykf0"; depends=[fields FNN locfit Matrix mvtnorm RColorBrewer zoo]; }; LIHNPSD = derive2 { name="LIHNPSD"; version="0.2.1"; sha256="08ils29vvaq6abkgxbh028vwjw6l6h10cirbnwr65s458zvh4xqv"; depends=[BB Bolstad2 moments optimx Rmpfr sn]; }; LIM = derive2 { name="LIM"; version="1.4.6"; sha256="03x1gnm06bw1wrzc01110bjzd2mvjdzbc2mbrazh22jrmb32w5d8"; depends=[diagram limSolve]; }; @@ -2114,19 +2146,19 @@ in with self; { LOGAN = derive2 { name="LOGAN"; version="1.0.0"; sha256="00y8kcykw01gv2g20vmpwkc3qqyafwbiw5pa731xlfnh1b8sn0hi"; depends=[dplyr foreign ggplot2 magrittr modules pander psych rlang stringr]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; }; - LPBkg = derive2 { name="LPBkg"; version="1.1.4"; sha256="07nqmpzhwgg64sjv6aqncl2zc9iss6d3ikmnq99azgjkq3jlfpfj"; depends=[Hmisc orthopolynom polynom]; }; + LPBkg = derive2 { name="LPBkg"; version="1.2"; sha256="1pgv6cb7m2j7qnrzybnv6x67a3ry8kpvisqj86rvxzclc9q56fdn"; depends=[Hmisc orthopolynom polynom]; }; LPCM = derive2 { name="LPCM"; version="0.46-3"; sha256="1bm5y95lzwcv8arlh55sy17m6hz1x48bcjkrwf3x34ax90qimf66"; depends=[]; }; LPGraph = derive2 { name="LPGraph"; version="2.0"; sha256="1d3czxihaz3f09bfb34knqb6prhcx50kh8y4qrhhakic999z6ifw"; depends=[car PMA SDMTools]; }; LPKsample = derive2 { name="LPKsample"; version="2.0"; sha256="1jg99025vk42rnjdymh3nj71npn4pmdsmk6rvnx3lykpi72f85dz"; depends=[apcluster igraph mclust]; }; LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; }; - LPRelevance = derive2 { name="LPRelevance"; version="2.0"; sha256="0h05a9dnnvhc6x48ak33n9y0ahyd2x6c7f1pwidj9c9fyb9ki7s5"; depends=[BayesGOF Bolstad2 ggplot2 leaps locfdr polynom reshape2]; }; + LPRelevance = derive2 { name="LPRelevance"; version="2.1"; sha256="0hcg8yl6l8r0aybprrn0zi8mkwp2wldbh53w9dagfrpnz5la05qa"; depends=[BayesGOF Bolstad2 ggplot2 leaps locfdr polynom reshape2]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; LPTime = derive2 { name="LPTime"; version="1.0-2"; sha256="08lb6884kj9pg12mzx67fdnqb86x5s6yzb72hh3nrz50awj1f8nn"; depends=[orthopolynom]; }; LPWC = derive2 { name="LPWC"; version="0.99.5"; sha256="13iv2v8lkyz9rpjzz2pr6b5g6nh79j8vd5hpx03vjyx08ii0dnq6"; depends=[]; }; LPmerge = derive2 { name="LPmerge"; version="1.7"; sha256="1wf7hfj670pnzzxyqm3vwrbrvxdbyprh42s5vpv4y54a0w4nr83g"; depends=[Matrix Rglpk]; }; LPower = derive2 { name="LPower"; version="0.1.0"; sha256="0g9y5s4k3l4zw97qh6c9jj6ysl39y4fprvqw1ybykirvgflisi8x"; depends=[MASS nlme]; }; - LRQMM = derive2 { name="LRQMM"; version="1.1.10"; sha256="0dg2a2fcs8l952qpzbk997z03ckwchblm10kj778020w7wcs6jss"; depends=[GeneticsPed MASS MasterBayes Matrix MCMCglmm quantreg SparseM]; }; + LRQMM = derive2 { name="LRQMM"; version="1.1.11"; sha256="109zn1a1a9jyi88h4yqfn6yvw93xn6vdsx99bmxmz2vv8rz0j7k1"; depends=[GeneticsPed MASS MasterBayes Matrix MCMCglmm quantreg SparseM]; }; LRTH = derive2 { name="LRTH"; version="1.3"; sha256="08vakwb7ca7956gifynzijka441yyx0wd5bq5jfhz56lzcxgfb99"; depends=[]; }; LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; LS2W = derive2 { name="LS2W"; version="1.3.4"; sha256="1h4vvl1gfxkdjmy6syl0gf4fv03xxxw82cxwvy10b40sf20lwmnv"; depends=[MASS wavethresh]; }; @@ -2143,7 +2175,7 @@ in with self; { LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.0"; sha256="07mvbk3hwl240r46ahha0a4fzq96awk963zl8dhky51b6abp83gz"; depends=[icenReg inum partykit rpart survival]; }; - LUCIDus = derive2 { name="LUCIDus"; version="0.9.0"; sha256="08z7ikvql40zwnh2sxn9fkzyjyn7gvq2pljff6iyqwvah01fd5ih"; depends=[doParallel foreach glasso glmnet lbfgs Matrix mvtnorm networkD3 nnet]; }; + LUCIDus = derive2 { name="LUCIDus"; version="1.0.0"; sha256="1gkbfb7gnlk19iy7wnls80h3mqa0y13fld1l5ivhskr7sjlla2q0"; depends=[boot doParallel foreach glasso glmnet lbfgs Matrix mvtnorm networkD3 nnet]; }; LVGP = derive2 { name="LVGP"; version="2.1.5"; sha256="03sd777s16nv04ikn9b3rj67ad6n4bwi0rycc7wqdnq0dx6xgniy"; depends=[lhs randtoolbox]; }; LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; }; LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; @@ -2163,11 +2195,11 @@ in with self; { LassoSIR = derive2 { name="LassoSIR"; version="0.1.1"; sha256="0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3"; depends=[glmnet]; }; Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; }; LatticeDesign = derive2 { name="LatticeDesign"; version="1.0-1"; sha256="1wlchqa7914401r0mzca4fffps99nfbj0jym1jxkclnjivdgcn24"; depends=[]; }; - LatticeKrig = derive2 { name="LatticeKrig"; version="7.0"; sha256="04waq7dpp86rpa8qgrjbpl72k6vhkd300vxfc1xxy5z7k36pinqh"; depends=[fields spam]; }; + LatticeKrig = derive2 { name="LatticeKrig"; version="8.4"; sha256="153yaf0k4l5za8f13yh2mzjv66bnmi5kp6zaxq9vrisld4vdp58h"; depends=[fields spam]; }; Lavash = derive2 { name="Lavash"; version="1.0"; sha256="0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07"; depends=[glmnet MASS pracma]; }; LeArEst = derive2 { name="LeArEst"; version="1.0.0"; sha256="0kga9n0ia2zljyw4xa9n572zmxpwql8xd3ys4p9jp02h432pfkpp"; depends=[conicfit doParallel foreach jpeg opencpu]; }; LeLogicielR = derive2 { name="LeLogicielR"; version="1.2.1"; sha256="0jd280ial4wfj5j6sbxgl2cbxabycsgmh2zsad7v7hcwbhhdd09i"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; - LeMaRns = derive2 { name="LeMaRns"; version="0.1.0"; sha256="1spbzgkda3qhls6m9bj24vdhc6xg7x55ip4a6lq1ql8zcy2wggfs"; depends=[abind Rcpp RcppArmadillo]; }; + LeMaRns = derive2 { name="LeMaRns"; version="0.1.1"; sha256="0ih6653nncijsy9wk0sqvk7im9msxz9qcc3abj539kgs1lhdgvg7"; depends=[abind Rcpp RcppArmadillo]; }; LeafArea = derive2 { name="LeafArea"; version="0.1.8"; sha256="0a464bcanq6jfm5j6692h61pipy28vm7m89y5i0hrhz7lzpy9x5z"; depends=[]; }; LearnBayes = derive2 { name="LearnBayes"; version="2.15.1"; sha256="0ch54v2zz2yyyk0lvn5rfikdmyz1qh9j1wk3585wl8v58mc0h4cv"; depends=[]; }; LearnGeom = derive2 { name="LearnGeom"; version="1.4"; sha256="0qalhy4g47ik8cq2m1zajhv79rla8g72dmcwhnizwn6afhm6fnpm"; depends=[]; }; @@ -2181,7 +2213,7 @@ in with self; { LifeHist = derive2 { name="LifeHist"; version="1.0-1"; sha256="0q6l6rva5kxl8yzqa7ni4sdj6p4c61sdsjx8zhckzxb7xlwg2hh0"; depends=[BB Hmisc optimx]; }; LifeTables = derive2 { name="LifeTables"; version="1.0"; sha256="1dyivvi5cjsnbhncj3arkrndadg7v81nzdf6p6mpgqwqvwn5li8x"; depends=[mclust]; }; LightningR = derive2 { name="LightningR"; version="1.0.2"; sha256="1va673aw2hgir8ybbjad6dhbs8izs1z4jcikwa7qp3mkv0zqd0vq"; depends=[httr R6 RCurl RJSONIO]; }; - LilRhino = derive2 { name="LilRhino"; version="1.1.0"; sha256="0pfahvn1wl310w897qhv3ynlfx5mgp237al47piqkdqmxmgma7dz"; depends=[beepr data_table dplyr e1071 fastmatch FNN forcats ggplot2 keras readr SnowballC textclean tidyr tm]; }; + LilRhino = derive2 { name="LilRhino"; version="1.2.0"; sha256="1d1mg77k67b5ddlp41haygagash48b6jy30q20lb231lbiss9ncp"; depends=[beepr data_table dplyr e1071 fastmatch FNN ggplot2 keras neuralnet readr SnowballC stringi textclean tm]; }; LinCal = derive2 { name="LinCal"; version="1.0"; sha256="1xr9jnna20hh78dh9wjg70jm8fhaxvdwql894kdp0y5h4pchkdph"; depends=[]; }; LinRegInteractive = derive2 { name="LinRegInteractive"; version="0.3-1"; sha256="0w7s3i6i2wnydh88l8lnzrh6w5zqkcwvms91iizis0mwd9af2jdl"; depends=[rpanel xtable]; }; LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; }; @@ -2191,6 +2223,8 @@ in with self; { LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; }; LinkedGASP = derive2 { name="LinkedGASP"; version="1.0"; sha256="1win1yd8y677rmic531dyd29f49p7pr1r3kbjysvv9syi5nkydyj"; depends=[nloptr spBayes]; }; LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.3.1"; sha256="01rsgk2v1r1jhpkvvhgqqa5lf6qncxy56f7jwfgxfig3dvgjf96r"; depends=[crochet]; }; + LipidMS = derive2 { name="LipidMS"; version="1.1.0"; sha256="193s5pc2dh848hvwwr1jw79yw90l7b9ic396s4jm36187y9nlw7n"; depends=[CHNOSZ enviPick LipidMSdata purrr]; }; + LipidMSdata = derive2 { name="LipidMSdata"; version="1.0.0"; sha256="110wvbk59knhsnbv665ji7v0kp4vjn0937k5fg2d724ksy44gxic"; depends=[]; }; Lmoments = derive2 { name="Lmoments"; version="1.3-1"; sha256="0pc63bj9a8hzr5m3yssrc4kin39fffwkl8rggs3sagzr12d4i7bw"; depends=[Rcpp RcppArmadillo]; }; LncFinder = derive2 { name="LncFinder"; version="1.1.3"; sha256="15zsll766n97q5rf3xvc3m5s7faxiybayxjzyfhsh7q9x12qnnd7"; depends=[caret e1071 seqinr]; }; LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; }; @@ -2201,10 +2235,12 @@ in with self; { Lock5Data = derive2 { name="Lock5Data"; version="2.8"; sha256="17awskq78h23z2dy96d7hziljhnkx5phpd48q7cppxidyvzfywim"; depends=[]; }; Lock5withR = derive2 { name="Lock5withR"; version="1.2.2"; sha256="10x3i11pb4cig4pgfmw9984na5zjbg7d41y6crakiimf53ihx0c2"; depends=[]; }; LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.6-3"; sha256="0gplkprvldw2dq43kvij215lv9x9xdnp47smn8m1r93nk4pxy5mr"; depends=[MASS mclust mvtnorm tkrplot]; }; - LogicReg = derive2 { name="LogicReg"; version="1.5.12"; sha256="074kyqkgnn04z5r3kq25cjbrr9rvkymmsjmy5fwjdkwvaww6dsys"; depends=[survival]; }; + LogicReg = derive2 { name="LogicReg"; version="1.6.1"; sha256="1aq9zr2n62p4diycfm910m6ffmd23qn8gjs0zva1brd3gbbi6zx0"; depends=[survival]; }; LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; }; LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; }; + LogrankPower = derive2 { name="LogrankPower"; version="1.0.0"; sha256="04vynymfv01q423dd9i1li92rl3lp1af3rzn3z4mamkn51mi6my0"; depends=[survival survminer]; }; + LongCART = derive2 { name="LongCART"; version="1.0"; sha256="03fh4glvk48lhmx2lp3vcy9k6jnfnzn73dpljq73fl8zlbr8vv61"; depends=[Formula nlme rpart]; }; LongMemoryTS = derive2 { name="LongMemoryTS"; version="0.1.0"; sha256="0n378sad8i283vs7q63spdhwpwjly2d5zj15d4v2085j7sc7z8vi"; depends=[fracdiff longmemo mvtnorm partitions Rcpp RcppArmadillo]; }; LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-6"; sha256="1gy9v6qiwkwbwp4snif2imf6zn50ffjrig54ln57c5v5pk3phnvv"; depends=[nlme]; }; LotkasLaw = derive2 { name="LotkasLaw"; version="0.0.1.0"; sha256="11kq52yavicimp7ll7ljrs69a5fxf68ydb9md7v6b02iw5mwbmz7"; depends=[]; }; @@ -2212,7 +2248,7 @@ in with self; { LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; Luminescence = derive2 { name="Luminescence"; version="0.9.5"; sha256="1ly9xlm3v552264sf44xsymv3r1v5znl3rsv5zak5zgdva0hjdjk"; depends=[bbmle data_table DEoptim httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; - M2SMF = derive2 { name="M2SMF"; version="1.0"; sha256="0hf5ckpridi70yv15h0771q1grhqr9c592r87hgba7yh55dqqcq1"; depends=[dplyr MASS]; }; + M2SMF = derive2 { name="M2SMF"; version="2.0"; sha256="160qjrb3mxybvr4z6zra6rzf6scyrb9mplw36gqlfxj418ndnmm1"; depends=[dplyr MASS]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; MADPop = derive2 { name="MADPop"; version="1.1.2"; sha256="0hwnkjrc3w9x3gha0y70fidfc587b6gfdhzwzdzrfvxrhsdy05yd"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.4"; sha256="1asr18byrgy6bkpxpmnkczgr3dam6ymf30lw6izq112krc891bg4"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; @@ -2234,7 +2270,7 @@ in with self; { MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; }; MATA = derive2 { name="MATA"; version="0.4"; sha256="0x155izylzwajlnlbdnawb3b8gwxd1cx03xb1sqi3w2g50bcljbf"; depends=[]; }; MATTOOLS = derive2 { name="MATTOOLS"; version="1.1"; sha256="1nzrkm3a08rpsd9vplyf33rrkadlrd0ln70k95qxj98ndh2v97px"; depends=[]; }; - MAVE = derive2 { name="MAVE"; version="1.3.9"; sha256="1x48w0i80vpgblr2713rbwflil6m7ay251jzqs1b8snp70il248h"; depends=[mda Rcpp RcppArmadillo]; }; + MAVE = derive2 { name="MAVE"; version="1.3.10"; sha256="0y5msdrczzr1q38s4zh0l8cwkq3akrdq0c63klldxa9cl4shmhzr"; depends=[mda Rcpp RcppArmadillo]; }; MAVIS = derive2 { name="MAVIS"; version="1.1.3"; sha256="02hi3n2rligmgg9afqwkpdny2kl68simkaqdd6k1swzlrih0fs4s"; depends=[compute_es ggplot2 irr MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS weightr]; }; MAVTgsa = derive2 { name="MAVTgsa"; version="1.3"; sha256="0rzal9nsi8y873cbf6hrdyzyxnpd4r1yr9fj66cn0s1c8g93ls0y"; depends=[corpcor foreach MASS multcomp randomForest]; }; MAc = derive2 { name="MAc"; version="1.1.1"; sha256="1dawqmziffaz8wgcqzwc0yifdq65abgn24vafkrwa9850048c26f"; depends=[]; }; @@ -2245,9 +2281,10 @@ in with self; { MBCbook = derive2 { name="MBCbook"; version="0.1.1"; sha256="0jmvgyzrahnxfkwdn86k3ffk0zfbbd34ya4zmlnsmp2m9xds7lgn"; depends=[MASS mclust mvtnorm Rmixmod]; }; MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; }; MBESS = derive2 { name="MBESS"; version="4.6.0"; sha256="1fc2zcjfk9k107bl3fs3wf8fxxrcpwyhiz7j1iv3w6zqf2l4fb88"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; - MBHdesign = derive2 { name="MBHdesign"; version="1.0.79"; sha256="1qz0igm8h3ij8yc9bg3vr3mkmf99h1kyxscdhkfphc66zaazhyw1"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; + MBHdesign = derive2 { name="MBHdesign"; version="2.1.5"; sha256="0hq6i4qwwcmyjf8h1lwdr54ph8d2rb6kgjida0wfn1bs4v0p1h4s"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; - MBNMAdose = derive2 { name="MBNMAdose"; version="0.2.3"; sha256="1iw0wfyvdmks4diwwj75hqvdkmwnjb3zfw30rgnmr3nmxc3fa0b6"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags scales]; }; + MBNMAdose = derive2 { name="MBNMAdose"; version="0.2.4"; sha256="0d5fi1i2sr39z5fdl303rjhxvp5h622zbkpfsv3yjq4vp0ymwka0"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags scales]; }; + MBNMAtime = derive2 { name="MBNMAtime"; version="0.1.2"; sha256="13742y17aclqbsbc039vlnmrg5sa1y6kjsdayl8ii9xnhbb5f48l"; depends=[checkmate dplyr magrittr R2jags Rdpack reshape2 rjags]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; @@ -2262,10 +2299,10 @@ in with self; { MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; MCMCglmm = derive2 { name="MCMCglmm"; version="2.29"; sha256="1d37rk10zi2yymsxif9091z9lnav7p4cazjfq29fhj90x8vpifhk"; depends=[ape coda corpcor cubature Matrix tensorA]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.4-4"; sha256="1xzrgib2mjz0xpqranhdyc5m4fmg2fir9mcf51ciw5pp53b97qcp"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.4-5"; sha256="1dfz3impsb70nq7qyk5aj5ixslj2zvwcl1mfqvqzy6zp8kx9r56s"; depends=[coda lattice MASS mcmc quantreg]; }; MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.9"; sha256="1zmlz2kwrp1qiyvq3v5vv1rsy3s2idlifmckmgznk4nkqds5ifwh"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; MCMCtreeR = derive2 { name="MCMCtreeR"; version="1.1"; sha256="00r6f62h7ryil7qxd25icvkqypjjssjsrz4i5sbqsnw5cdy5al8z"; depends=[ape coda sn]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.13.1"; sha256="0p5snrikn9xhjvyzpq5fh2c10304cygxkwqcy2a3s6sqgan4brch"; depends=[coda overlapping rstan]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.13.3"; sha256="167j3qjkiwji0vgww7q2byj39hxzhf6jpln9rhhm384y4ycpabys"; depends=[coda overlapping rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; }; MCPModGeneral = derive2 { name="MCPModGeneral"; version="0.1-0"; sha256="1660r7ibgj5jl5nf3p11911n8k3wbnnzagapn73f2g5racwrbx1d"; depends=[DoseFinding MASS]; }; @@ -2274,7 +2311,7 @@ in with self; { MCTM = derive2 { name="MCTM"; version="1.0"; sha256="14xjfskyrqi0m58lkwjfjpss5j7wy3ajr148n526czrrpccg108j"; depends=[]; }; MChtest = derive2 { name="MChtest"; version="1.0-3"; sha256="1b3p6ry8gkvyphakn3504ibl2x8dbhx95saild0mj0iwm3sjyspf"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; - MDFS = derive2 { name="MDFS"; version="1.0.3"; sha256="09lmwvysyy34l51mda01cjr4579i3v16vsj2kf3066dyhjik1zl4"; depends=[]; }; + MDFS = derive2 { name="MDFS"; version="1.0.5"; sha256="17ksjgzi8sxyqczscq1rd6a8zgdd0h9sm3c0ymsf0phr69msvpg0"; depends=[]; }; MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; MDSMap = derive2 { name="MDSMap"; version="1.1"; sha256="0knrkfwgl763fwdb3ln3g5y3rarnpqdfgzxf4m045664m7gkipsg"; depends=[princurve reshape rgl smacof]; }; @@ -2288,6 +2325,7 @@ in with self; { MEMSS = derive2 { name="MEMSS"; version="0.9-3"; sha256="0fq85jrajfwavq2fvsw2x9hknc57wc253zw2vw970f04khfbragd"; depends=[lme4]; }; MEPDF = derive2 { name="MEPDF"; version="3.0"; sha256="15hbp7g5dsdpvi239jm6jn11fn371ir6la31g0flqkilq6sr1sqd"; depends=[gtools mvtnorm plyr pracma]; }; MESS = derive2 { name="MESS"; version="0.5.6"; sha256="1p0ail3pd5mrw7p9f1hs5vqdirpjdkgs63zpsib60qjhg61l0iy6"; depends=[geeM geepack ggformula ggplot2 glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; + MEclustnet = derive2 { name="MEclustnet"; version="1.2.2"; sha256="0rs58dafxngk2lkq14cy14ayjwgnz1gmi12jmi4z74sdj0b3h0gw"; depends=[e1071 ellipse latentnet MASS mvtnorm nnet vegan]; }; MEtest = derive2 { name="MEtest"; version="1.1"; sha256="0dxm3fs0lqnas70a1ckikvjp2ib9rqsknwcs9n9jfsmm1fqhxdpf"; depends=[statmod]; }; MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; }; MFAg = derive2 { name="MFAg"; version="1.5"; sha256="0av47syfb0jkiix0xjnd208bz78gx5ji2y9kb7ni1yd7njm7in9m"; depends=[]; }; @@ -2296,6 +2334,7 @@ in with self; { MFKnockoffs = derive2 { name="MFKnockoffs"; version="0.9.1"; sha256="1bcdqfzmllp3dri1phy365wgc9c37wlag65pzljn4p3mf43w10nq"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; MFPCA = derive2 { name="MFPCA"; version="1.3-2"; sha256="1p467zc8lvdcl8n0mf6aazm39flbn62ykwc6c6brkxy46cdvc5jv"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="2.0"; sha256="0n1xws3dw0650037qyqgp600p8cf098qa5hkbncdfdbl0w34qamy"; depends=[]; }; + MGBT = derive2 { name="MGBT"; version="1.0.2"; sha256="0jgdy8zw5lx2f567n3livgmwhpfcd1s42mp1bj859jx3z5kiwkiy"; depends=[]; }; MGDrivE = derive2 { name="MGDrivE"; version="1.1.0"; sha256="16nm47vazd06hvi4k3z86lxilgk8y4b3p44h6cm2b8az90irmj5f"; depends=[data_table R6 Rcpp Rdpack]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; MGLM = derive2 { name="MGLM"; version="0.2.0"; sha256="0yyqm53lvp59zy8lkffw9x3zhqrnh29j5v3yyzk6qrgj2slnc7nk"; depends=[]; }; @@ -2317,6 +2356,8 @@ in with self; { MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; MKLE = derive2 { name="MKLE"; version="0.05"; sha256="00hcihjn3xfkzy0lvb70hl2acjkwk6s3y7l4gprix24shnblvxzi"; depends=[]; }; + MKdescr = derive2 { name="MKdescr"; version="0.5"; sha256="0dgdglr173pjlvbh9kd67pl890pnlzlcfm04ax4bdas6gp1cb6j6"; depends=[ggplot2 scales]; }; + MKinfer = derive2 { name="MKinfer"; version="0.3"; sha256="0d2kp7q9nj7cg99178byanfsvzp6xajhh07wxy59d70anbh7a9hz"; depends=[arrangements boot MKdescr nlme]; }; MKmisc = derive2 { name="MKmisc"; version="1.6"; sha256="0x518icdgq4mrc6qm1flb5lpr9y7j9znh0ah3gw2xsbjiplqd323"; depends=[ggplot2 limma RColorBrewer robustbase scales]; }; ML_MSBD = derive2 { name="ML.MSBD"; version="1.2.0"; sha256="1dxvvyha984j3h170s2brhbf4lm53f16f12lhnqf3sl4sc0f4xv8"; depends=[ape foreach]; }; MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="2.1.1"; sha256="1x0xmka7kkbjnh3yv4zxxyl17cpmf0rb9hxmdl1srb6ijld4np1b"; depends=[limSolve MASS MultiLCIRT]; }; @@ -2326,30 +2367,31 @@ in with self; { MLEcens = derive2 { name="MLEcens"; version="0.1-4"; sha256="0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945"; depends=[]; }; MLGL = derive2 { name="MLGL"; version="0.5"; sha256="020z18x5hlc1v975a7wi6vlairl8w7prjsfsvdiydl6xh56pdrr9"; depends=[FactoMineR fastcluster gglasso MASS Matrix]; }; MLID = derive2 { name="MLID"; version="1.0.1"; sha256="0ygahmcfbydzic5q3h1ppv5b2ks4lh8mcyfqq27ssmn4g1n6hdvp"; depends=[lme4 nlme]; }; - MLML2R = derive2 { name="MLML2R"; version="0.3.2"; sha256="0ii1hzbv21x96jancz30rg0jd6kz9miq22j9xx1i9zrzxx1rlh0p"; depends=[]; }; + MLML2R = derive2 { name="MLML2R"; version="0.3.3"; sha256="1jgk0h3chab831g5nsppgc6p0xplv11j82491iymnxixqfswb08w"; depends=[]; }; MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLRShiny = derive2 { name="MLRShiny"; version="0.1.0"; sha256="06zcyz8l4754sjbcql3jd3nq1d2lgj92p5h2bh708z52mww71isw"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLRShiny2 = derive2 { name="MLRShiny2"; version="0.1.0"; sha256="1ygamp0ldz1i0w2xyi205rpd1gd5asw61l36z06j41ghdyiz1lww"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLZ = derive2 { name="MLZ"; version="0.1.3"; sha256="0yj9241k3yk8qy6w2q26gwbj9b9qynv3s3jpyfxixvkc9kji3wc2"; depends=[dplyr ggplot2 gplots RcppEigen reshape2 TMB]; }; + MLeval = derive2 { name="MLeval"; version="0.2"; sha256="1dv795x8v78b6kpwdzmy0zlyrhwpf7gdwiss51d2kpp4h74ylsgr"; depends=[ggplot2]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; MM = derive2 { name="MM"; version="1.6-5"; sha256="0vi6wp6p48jjfmnspdsnmw0yqz39sjk6nrkxdw7kan5h17h4rwd7"; depends=[abind emulator magic Oarray partitions]; }; MM2S = derive2 { name="MM2S"; version="1.0.6"; sha256="1knr15vjc81cp7j67nc2gwkgds6ar3ribi1h0ihg0ch6rfz5c5zs"; depends=[GSVA kknn lattice pheatmap]; }; MM2Sdata = derive2 { name="MM2Sdata"; version="1.0.3"; sha256="0hlm6jp8jq38vkszwdgpf30w11l1fhpblg26zv05j50a6whpmhqd"; depends=[Biobase]; }; - MM4LMM = derive2 { name="MM4LMM"; version="1.1.5"; sha256="1mwb10vq5mnfdq47qxr58xq8iq4n343m4xb9jpzf3a65nnxsgl95"; depends=[Matrix Rcpp RcppEigen]; }; + MM4LMM = derive2 { name="MM4LMM"; version="2.0.1"; sha256="1rmzzfzw1hpsmvgc9pcqqf9k8p4fvdh6pizy4sjvavphqvzjfnj6"; depends=[MASS Matrix Rcpp RcppEigen]; }; MMAC = derive2 { name="MMAC"; version="0.1.2"; sha256="1xwz48iizf0lvmhc7krsraabc49ky85qvgr23w4ip6jzfv4sn1jr"; depends=[]; }; MMDai = derive2 { name="MMDai"; version="1.4.0"; sha256="0bb7hg8fkmzg87xr1b2hxhy75xi461ks6w12z85k4c77kswfpx3b"; depends=[DirichletReg]; }; MMDvariance = derive2 { name="MMDvariance"; version="0.0.9"; sha256="1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi"; depends=[Biobase lawstat MASS]; }; MMLR = derive2 { name="MMLR"; version="0.1.0"; sha256="0gir1adflxkmz3qfpy2xkx434phzszsylzw38vdgicmdic1m2ywq"; depends=[matlib]; }; MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; }; - MMS = derive2 { name="MMS"; version="3.0.11"; sha256="0gc4iz371bi65sp49gvjh99f8jvii8l0k12kn1vbpzk4a3cw7iad"; depends=[glmnet Matrix mht]; }; MMWRweek = derive2 { name="MMWRweek"; version="0.1.1"; sha256="16dwmpj13rzxmd2x7xaakw2zq2aly7ajjbfnc39qvdzk6n2x37wn"; depends=[]; }; MMeM = derive2 { name="MMeM"; version="0.1.0"; sha256="1b0wdcyqnliw85il5vnwy9l4x1z42kirbg872hl47plwfrp9gahc"; depends=[jointDiag lme4 MASS Matrix matrixcalc psych stringr]; }; MNLR = derive2 { name="MNLR"; version="0.1.0"; sha256="0q80232ndp7pkklzqdbga1vf51dmsxaivm4ia4wah32rc2c87fqp"; depends=[caret e1071 nnet rmarkdown shiny]; }; + MNLpred = derive2 { name="MNLpred"; version="0.0.1"; sha256="1h8qnirhvlskhm7zg7h8jbx76r53gywpswxyj4w7gb04qhdkzmhl"; depends=[MASS tibble]; }; MNM = derive2 { name="MNM"; version="1.0-3"; sha256="16b2yrm2kn943vzrr38qhk6qq20a842xv7iiln4is02csijxw2b3"; depends=[ellipse ICS ICSNP SpatialNP]; }; MNP = derive2 { name="MNP"; version="3.1-0"; sha256="06qs2vsmjs6rcpqlwfc1n5y5hzxf7pngbdmiza1wijm9hh54ikh0"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; MOCCA = derive2 { name="MOCCA"; version="1.3"; sha256="1ffpnqcrkrr7vh0f1fyyai0c2wq3v8sk2qhnhds49z7p6xrsmh21"; depends=[cclust class cluster clv]; }; - MODIS = derive2 { name="MODIS"; version="1.1.5"; sha256="0g7z7x7vnjwcw3mp7sk9xxswkkyy9l8nppy7qaissizrvxv607vw"; depends=[bitops curl devtools mapdata mapedit maps maptools ptw raster rgdal rgeos sf sp]; }; + MODIS = derive2 { name="MODIS"; version="1.1.6"; sha256="0nby3j356hglf2hdddqyq8vm99ynwk4wjmqrbjl5k9pr9yjkhda8"; depends=[bitops curl devtools mapdata mapedit maps maptools ptw raster rgdal rgeos sf sp]; }; MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; MODISTools = derive2 { name="MODISTools"; version="1.1.0"; sha256="0242jxxdkwi39ra160p42psgcgf8alwaij004v29apy03g95rrvd"; depends=[httr jsonlite memoise sf]; }; MODIStsp = derive2 { name="MODIStsp"; version="1.3.9"; sha256="0zjc8q3zi2i0i7l1bmw558sxdcsjba2lh31i428cy9pd886j5jn3"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 httr jsonlite pacman raster rgdal rgeos sp stringr xml2 xts]; }; @@ -2360,13 +2402,14 @@ in with self; { MOST = derive2 { name="MOST"; version="0.1.0"; sha256="0nmjx5hsn67hdglcqyanq3az76rs15knv8qy28f8paah5s9w24xf"; depends=[]; }; MOTE = derive2 { name="MOTE"; version="1.0.2"; sha256="17y2l2rmw7fhvknyh5z09i7hd8nhamx12g00rcymp75gqkz9lzc7"; depends=[ez MBESS reshape]; }; MOrder = derive2 { name="MOrder"; version="0.1"; sha256="1vhy20xyvfc18f04hvlb1jm2n0caaz8ysy13w2rra5i4kjdvz52i"; depends=[]; }; + MPBoost = derive2 { name="MPBoost"; version="0.1-3"; sha256="0fmyy4s2h7hjca6nww0bgcax7309nkqp295mpp8hl8yllz7ylmsm"; depends=[BH Rcpp]; }; MPCI = derive2 { name="MPCI"; version="1.0.7"; sha256="1l55q09lliv0y4q1hc0jgzls47wkmsfag6b4iq5y6wrllr5wq7sa"; depends=[]; }; MPDiR = derive2 { name="MPDiR"; version="0.1-16"; sha256="10g4dnysjnzf106qibqqcrxz3xw2nfh4ck1n1dlciwahr0f80j13"; depends=[]; }; MPINet = derive2 { name="MPINet"; version="1.0"; sha256="1zw3piqhhpagg5qahc2xahxxfdwdk8w94aass1virlpl0f52ik8s"; depends=[BiasedUrn mgcv]; }; MPLikelihoodWB = derive2 { name="MPLikelihoodWB"; version="1.1"; sha256="0xgj349jkv29ldia4lmsiwnkhrk99aqcrvyiy3si5knmi1jvx9q0"; depends=[MASS survival]; }; MPN = derive2 { name="MPN"; version="0.3.0"; sha256="0rrigkq5bkarncswv8kgvvwd1vrq5cqnb5vypa9d39q2ksqf8j3d"; depends=[]; }; MPR_genotyping = derive2 { name="MPR.genotyping"; version="0.8"; sha256="0lsrbks7nhfnrmk8kclh09rc132j3divjxrzjfrg8zijbzkfx1pn"; depends=[qtl]; }; - MPS = derive2 { name="MPS"; version="2.3.0"; sha256="0rr66f3ijzvqzj6b0hl7i065r5ndzcb2r5sjhx32rihgjdg60lr3"; depends=[]; }; + MPS = derive2 { name="MPS"; version="2.3.1"; sha256="08yzynznf33y7y3pf7fayks5hi3cdvzwzn8axg7aky5kvi2bfv22"; depends=[]; }; MPSEM = derive2 { name="MPSEM"; version="0.3-6"; sha256="0kw3aixhl5j8nq4lcx65l80v4lihvpa4qd12n2jrc96lnm6mw00b"; depends=[ape MASS]; }; MPTinR = derive2 { name="MPTinR"; version="1.11.0"; sha256="1pflypcysc43yp4rh1lxnf7f0qklc6rl4y1mvj6ydwv5nlz52mbh"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPTmultiverse = derive2 { name="MPTmultiverse"; version="0.3-3"; sha256="0wl5ww7ii8vbgg3680zh3y5pqz1ipfnhjka1lz62fmp3rs09zmfq"; depends=[coda dplyr ggplot2 limSolve magrittr MPTinR purrr readr reshape2 rlang runjags tibble tidyr TreeBUGS]; }; @@ -2380,16 +2423,16 @@ in with self; { MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; }; MRHawkes = derive2 { name="MRHawkes"; version="1.0"; sha256="0qhwm708jijv1w6iml18bg7fc2igdcmydwpb9dzpa4gwwads8b78"; depends=[IHSEP]; }; MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; - MRPC = derive2 { name="MRPC"; version="2.1.0"; sha256="1gpsx1dpzr79zn994z5yp3ikymfvfa8zmwmayhf736f6jnsmwi45"; depends=[bnlearn compositions dynamicTreeCut fastcluster GGally graph gtools Hmisc mice network pcalg Rgraphviz sna WGCNA]; }; + MRPC = derive2 { name="MRPC"; version="2.2.0"; sha256="1ks23kf273khzidgxg6gzkynxlga8dybfcwfigli9wv0kcrzvdpx"; depends=[bnlearn compositions dynamicTreeCut fastcluster GGally graph gtools Hmisc mice network pcalg psych Rgraphviz sna WGCNA]; }; MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; }; MRS = derive2 { name="MRS"; version="1.2.4"; sha256="1sksg70zb72ys1b7vi8amjaqarmdh8vf2l1rb0rasrlvrip3z3br"; depends=[igraph Rcpp RcppArmadillo]; }; MRTSampleSize = derive2 { name="MRTSampleSize"; version="0.1.0"; sha256="1f6ivr6cx4irqkry219x4nk6k5zhp3b19axy2xbfc3dx5zixhpjl"; depends=[]; }; MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MRwarping = derive2 { name="MRwarping"; version="1.0"; sha256="13bcs7rlm4irx7yzdnib558w9014a4chh9xwc010m6pxvxv36qnv"; depends=[boa SemiPar]; }; - MSCMT = derive2 { name="MSCMT"; version="1.3.3"; sha256="1962lc6p5cy8pkbshzbl3jnd2pqnk9afs4lmp4qb7fqkmb4xpka3"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; - MSEtool = derive2 { name="MSEtool"; version="1.3.0"; sha256="0px8w9xp64i2xbb9h3vk2hd77qw7spcffix8nlbvh92bwlm5rckk"; depends=[abind coda corpcor DLMtool gplots MASS mvtnorm RcppEigen reshape2 rmarkdown snowfall TMB]; }; + MSCMT = derive2 { name="MSCMT"; version="1.3.4"; sha256="1vh0i9nxqiy3qdnb7z7cn5kpp2jahdmaqpnv7q5650pkswhwmfpc"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; + MSEtool = derive2 { name="MSEtool"; version="1.4.0"; sha256="172jsgkcp955pssgby6vvaqrlxp371b1i60fd6w2i901jkja3fdz"; depends=[abind coda corpcor DLMtool dplyr gplots MASS mvtnorm RcppEigen reshape2 rmarkdown snowfall TMB]; }; MSG = derive2 { name="MSG"; version="0.4"; sha256="0fdxgqfc87iwqnnrgh7m8bfxh8lv42ffi0xxy4i1rv94aiw8gfr5"; depends=[RColorBrewer]; }; - MSGARCH = derive2 { name="MSGARCH"; version="2.3"; sha256="0dax3cx0dzmg086vhymnm5x5s7ljdnxx1k52xnnvrm6pprhdgaqn"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; + MSGARCH = derive2 { name="MSGARCH"; version="2.31"; sha256="15df35l5nr6cl3q7xprl6ifswh7mg1fvix1x9374qgyafwr40sq4"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; }; MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; }; MSMwRA = derive2 { name="MSMwRA"; version="1.3"; sha256="0b0fqfv6iick1brqik4rqz2936nfa51i6xlfavs65r9692wks73q"; depends=[]; }; @@ -2399,12 +2442,14 @@ in with self; { MSbox = derive2 { name="MSbox"; version="1.2.1"; sha256="0lmvpzsw13w18mzi5z85yzify3xsh5sx356ndggfzyl5d5wk7s8g"; depends=[stringr xml2]; }; MScombine = derive2 { name="MScombine"; version="1.4"; sha256="0s3gbf3s5mf00d5mkbqhd9wwnyps7qb4r3zbal8j8nsaspql9nd3"; depends=[plyr]; }; MSwM = derive2 { name="MSwM"; version="1.4"; sha256="1zhfar02s7hm4gjs1flkh9a4526d98hik8bqrksy75758baiqg7l"; depends=[nlme]; }; - MTA = derive2 { name="MTA"; version="0.1.2"; sha256="1149xjq6ybjv6llzlq67j5xc6dspb4mvd72n62nlbq3zz80x7f84"; depends=[igraph rgeos sp]; }; + MTA = derive2 { name="MTA"; version="0.2.0"; sha256="1wic2rw63h2daha23fpyw80x7ywjwqq6rj5jg73iankvdg32mlvm"; depends=[cartography igraph sf sp]; }; MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; MTE = derive2 { name="MTE"; version="1.0.0"; sha256="009mrl9dgxafl4hrgfzvsfvgx3dljb0rbbs74j2cxc5ray87kp55"; depends=[parcor quantreg]; }; + MTGS = derive2 { name="MTGS"; version="0.1.0"; sha256="0ijcw730xap5c38k8z4d976azwcnygxaiv2ksrad8j8nnvnh5zbd"; depends=[glmnet kernlab MRCE]; }; MTLR = derive2 { name="MTLR"; version="0.2.1"; sha256="070121qn7vmxmxgvzv7ymhk19j9kxks4xa7qpd8vkc2rp3ara4cp"; depends=[Rcpp RcppArmadillo survival]; }; MTS = derive2 { name="MTS"; version="1.0"; sha256="09pypanjmqrvxbrrckydxyyswsgjx4nhb052x4llk7va9w4lbcjs"; depends=[fBasics fGarch mvtnorm Rcpp]; }; MTSYS = derive2 { name="MTSYS"; version="1.2.0"; sha256="04dkan3hxl3difflskp7d1lw1bvxhg4s28ssy2v4m7z7wbpj3v1m"; depends=[]; }; + MUACz = derive2 { name="MUACz"; version="1.0.0"; sha256="0sh5h2qn769bpp8l09mvh1cabr2j1vywaqbj6fci84h8zx5y55fj"; depends=[dplyr epiDisplay ggplot2]; }; MUCflights = derive2 { name="MUCflights"; version="0.0-3"; sha256="03ksvv5nyzlqiml1nz405r3yqb2cl35kpm1h61zcv2nqq8cxqshs"; depends=[geosphere NightDay RSQLite sp XML]; }; MUS = derive2 { name="MUS"; version="0.1.6"; sha256="0xid624rz0mvd03iy7ydvmx7gkscvsg4kdbaf2nji54ahai3pmn3"; depends=[]; }; MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; @@ -2421,10 +2466,10 @@ in with self; { MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; MWright = derive2 { name="MWright"; version="0.3.2"; sha256="1c57f0wnlhl4gqy17vi93r4fknycvv67b9bifgcvabws390jpx7q"; depends=[cubature]; }; - MXM = derive2 { name="MXM"; version="1.4.4"; sha256="1dmq8ws1dqd294lrhd60dh1avkj58n9dha5ag4igwgjw31mphsr9"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; + MaOEA = derive2 { name="MaOEA"; version="0.5.2"; sha256="1yaa8wr1gr1npqpls5g6mlr9dgjwiyvhk6p1dmjw29f7a4g2cam5"; depends=[e1071 gtools lhs MASS nnet nsga2R randtoolbox reticulate stringr]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; MachineLearning = derive2 { name="MachineLearning"; version="0.1.3"; sha256="0yvrsqzvx8ss614ixa9mwkg2ig3hmfixm78fi8c3wmpc2frvsqrk"; depends=[arules crayon dplyr formula_tools FSelectorRcpp ggplot2 magrittr NbClust rpart rpart_plot]; }; - MachineShop = derive2 { name="MachineShop"; version="1.5.0"; sha256="1injyl578zd5qs13h8bwzavb4gzam896d7g9304ck6rh2lbci4hj"; depends=[abind foreach ggplot2 kernlab magrittr party polspline recipes rlang rsample Rsolnp survival tibble]; }; + MachineShop = derive2 { name="MachineShop"; version="1.6.0"; sha256="1kdqicj6f5ivg01qp69wm1liwl6x2dqvm9va728w524h4m0361wj"; depends=[abind foreach ggplot2 kernlab magrittr party polspline recipes rlang rsample Rsolnp survival tibble]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; Mangrove = derive2 { name="Mangrove"; version="1.21"; sha256="1qf3fjzf0sb6fqbfdbxwbw6wah3gg2qran4mgg13hcmk4n3j0hxp"; depends=[]; }; @@ -2444,12 +2489,13 @@ in with self; { MasterBayes = derive2 { name="MasterBayes"; version="2.55"; sha256="14532l41x5k3z2qg0vklafqyzmn45qny9hlrrgriykajv3xjf2lz"; depends=[coda genetics gtools kinship2]; }; MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; }; MatSkew = derive2 { name="MatSkew"; version="0.1.5"; sha256="019v2b1r0bvw84xs50smjb3jdz7gd2adz5d84xd8zq43lnml96d1"; depends=[]; }; - MatTransMix = derive2 { name="MatTransMix"; version="0.1.5"; sha256="0c4kmlzrscrlbvbsqvkmfr9v95hy4hkwk52vnkanh3gqjmpy2rjk"; depends=[]; }; + MatTransMix = derive2 { name="MatTransMix"; version="0.1.6"; sha256="07npn31abksi17s8g1cgxnciyw2nm1mzfmbys3kfkgb8nqq0d6g2"; depends=[]; }; MatchIt = derive2 { name="MatchIt"; version="3.0.2"; sha256="1pp91pw2sy9hik4sgn4gcsp40hb01n9pfccrwdcffwji5fd1aavq"; depends=[MASS Matching]; }; MatchIt_mice = derive2 { name="MatchIt.mice"; version="3.0.1"; sha256="04c078fz7s0wll4wizi0mj4s3gdx1kpr5g40gq7znn362z7q25ym"; depends=[MatchIt mice]; }; MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; }; + MatchThem = derive2 { name="MatchThem"; version="0.9.0"; sha256="166wvf43vyl2bn0qcqmlz4nk4hysafiid7imr7d699mrg2g2p7db"; depends=[dplyr MatchIt mice survey WeightIt]; }; Matching = derive2 { name="Matching"; version="4.9-6"; sha256="1p36id8cds865b44jdbk6c3fnadvhh203qx6d3g54bi4s7bww3cf"; depends=[MASS]; }; - Matrix = derive2 { name="Matrix"; version="1.2-17"; sha256="1k1zf92ycqr7fz44w7bp1p354ww7jg0wm23ybb8dzmbg37qfchyv"; depends=[lattice]; }; + Matrix = derive2 { name="Matrix"; version="1.2-18"; sha256="06b1rc1vq65b271f2wpzhqkvhng8hwwnvjflzxkng50i52603zzp"; depends=[lattice]; }; Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.7"; sha256="1x64r4aj3gy1dzjjysyrk1j9jq3qsnyrqws8i6bs7q8pf6gvr7va"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.2"; sha256="1205jxx5aj783r2dmpawiq4rr30b60fq1qf053i7wylw07pz6vba"; depends=[]; }; @@ -2459,7 +2505,8 @@ in with self; { MaxPro = derive2 { name="MaxPro"; version="4.1-2"; sha256="19a2wp93kx1wkbzd5bvljbm1rr96gr14w4fb0ppbgr2y2a4g8i1v"; depends=[nloptr]; }; MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; }; MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; }; - MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.3.5"; sha256="1692v59h953rgyp86ix24jspk7da671ynz6splw761ky8aqrfl89"; depends=[dplyr futile_logger lubridate magrittr purrr rlang stringr tibble]; }; + MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.4.0"; sha256="168qi75r75fjwbarz8kj50ba43as6b15iarhni61sc4zf92lh2da"; depends=[devtools dplyr futile_logger lubridate magrittr purrr rlang stringr tibble]; }; + MazamaLocationUtils = derive2 { name="MazamaLocationUtils"; version="0.1.6"; sha256="187lrpc9z3k4jnd1nvqsb0qibz9xz9i1i61vssqm72h1hx1j9j6f"; depends=[digest dplyr geodist httr lubridate magrittr MazamaCoreUtils MazamaSpatialUtils readr revgeo rlang stringr]; }; MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.6.4"; sha256="0wb221h8lwdcx5h5hkvpz9rarizry22qzydibcc2gs6b0d5514ms"; depends=[countrycode dplyr geojsonio lubridate magrittr rgdal rgeos rlang rmapshaper rvest shiny sp stringr xml2]; }; MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.7"; sha256="16k6wxwjkdwzx1cqcxpxwaj7i63khly90gyiyfw13di43h8cvsd1"; depends=[dplyr futile_logger lubridate mime stringr webutils]; }; McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; @@ -2491,7 +2538,7 @@ in with self; { MetaSKAT = derive2 { name="MetaSKAT"; version="0.71"; sha256="1bfy1zqblwz7a9fr9i6hs18x2n422x52b928v77r3924nasa67a8"; depends=[SKAT]; }; MetaStan = derive2 { name="MetaStan"; version="0.1.0"; sha256="12r76wrspsz2c8pys0b0s117h514qch776969fbz94w6gjhv3km4"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; MetaSubtract = derive2 { name="MetaSubtract"; version="1.50"; sha256="1aggkvpyl2zpnmqzrr7k22wmb4dyagljcwrkm956nbyvlzx4sx2x"; depends=[]; }; - MetaUtility = derive2 { name="MetaUtility"; version="1.2.0"; sha256="0sr24cls0li0351s9ly39x0xp310lbbabzwixhmnvavwmp0a66ls"; depends=[metafor stringr]; }; + MetaUtility = derive2 { name="MetaUtility"; version="2.1.0"; sha256="1lbqqh56pwxlcksv0kf463hc20jb4rkjqkcqal000rzyzd4bi2zj"; depends=[dplyr metafor purrr stringr]; }; MetaboList = derive2 { name="MetaboList"; version="2.0"; sha256="10skvf14ls4qll0l9p6cig4lmj7138khcksyjvd1pqym9axk3wxn"; depends=[dplyr enviPick ggplot2 scales]; }; MetaboLouise = derive2 { name="MetaboLouise"; version="1.0.0"; sha256="1agcp520in0wpxv3x2jvvmv61hasazdymnvjhzl66nwv8lifl98z"; depends=[igraph]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; @@ -2506,7 +2553,7 @@ in with self; { Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; Metrics = derive2 { name="Metrics"; version="0.1.4"; sha256="0fh8qbjlwzagh272lgwr4bxcqcjb1qpz53mgs8rzlvncax6nk5bk"; depends=[]; }; - MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.2.0"; sha256="19akjaw7fkg99hr6fdvwscp8yv1n72hf8v3rlywzrj3f00wnh74m"; depends=[]; }; + MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.4.0"; sha256="04j3cf6p9nzxcd6q5cd3asz13707rxyg5rd2qv76zsdgm10ys6mm"; depends=[]; }; MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; MiDA = derive2 { name="MiDA"; version="0.1.2"; sha256="144gxsxqljzskxsw5k0y69ix0pxlfvyyznxkjpf2ng4l47pg11z5"; depends=[caret gbm genefilter limma preprocessCore pROC SQN]; }; MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[ArgumentCheck cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; @@ -2522,7 +2569,7 @@ in with self; { MinBAR = derive2 { name="MinBAR"; version="1.1.0"; sha256="03hzv6a56w0d6di3jp3w3fgckwxkqb1cy3xiwcvzyg5lzm4z9p2x"; depends=[dismo ecospat geosphere lattice latticeExtra maxnet raster rgdal sp]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; - Minirand = derive2 { name="Minirand"; version="0.1.0"; sha256="0iahhshqxpkxhpchb4hiv7d9rir2d3zxazs2nz7ymzdlhnn41xi1"; depends=[]; }; + Minirand = derive2 { name="Minirand"; version="0.1.1"; sha256="15mp9vjb40a9v26lk82361bnmbf8pwgnr9pk4j49hhf6mhb01znr"; depends=[]; }; MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; }; MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; @@ -2530,7 +2577,7 @@ in with self; { MixAll = derive2 { name="MixAll"; version="1.5.1"; sha256="1jsh29ygy1n7lbz93ks725li9hnvfa0kp1qik13m72nmgw7g7q5a"; depends=[Rcpp rtkore]; }; MixGHD = derive2 { name="MixGHD"; version="2.3.3"; sha256="16x8pq077w8ikksypr9szy863pwcfzmfa9f13pssb61x7yyqfa2f"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; }; - MixMatrix = derive2 { name="MixMatrix"; version="0.2.2"; sha256="0gpqggw0fskd37lr0vjpf0y6gv711w6invfwj09rzggxlq6vx2fh"; depends=[CholWishart Rcpp RcppArmadillo]; }; + MixMatrix = derive2 { name="MixMatrix"; version="0.2.4"; sha256="1bmd99p98brp8nzqhf442py2hmdj2vnzn15qwhrdskh6i0gzaqc4"; depends=[CholWishart Rcpp RcppArmadillo]; }; MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; }; MixSAL = derive2 { name="MixSAL"; version="1.0"; sha256="15dymyzfs3bwskaf6xndj291g6nhw7k1q93y1cba55a6fdjh5qz9"; depends=[MASS]; }; MixSIAR = derive2 { name="MixSIAR"; version="3.1.10"; sha256="0kc0apzl6aq9qjgrnnad78k71g91hzc1d7f3j0s1kpwzax2q6l2l"; depends=[bayesplot coda ggmcmc ggplot2 lattice loo MASS MCMCpack R2jags RColorBrewer reshape reshape2 rjags]; }; @@ -2546,6 +2593,7 @@ in with self; { MmgraphR = derive2 { name="MmgraphR"; version="0.3-1"; sha256="0nfv2cax2v2zhsbprwykngq5n6i5qcf8189rci9d48d5k9qm4a5r"; depends=[colorspace march msm TraMineR]; }; MoEClust = derive2 { name="MoEClust"; version="1.2.3"; sha256="1bkknlp49bcx4s2lpdqwpqn5f5rr90lah0zkvmkih309rayirjr3"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; }; + MoTBFs = derive2 { name="MoTBFs"; version="1.1"; sha256="0cr36yqxbibfcz9swmh7znl1dq4zfighnh6r3fcbnd1kxf45d745"; depends=[bnlearn ggm lpSolve quadprog]; }; MobileTrigger = derive2 { name="MobileTrigger"; version="0.0.31"; sha256="1zbnxdxh6gr4sgpi10i0pnd85f7i842105jgjswacziqamby6mcy"; depends=[caret ggplot2 kableExtra knitr mailR plyr XML yaml]; }; ModStatR = derive2 { name="ModStatR"; version="1.3.0"; sha256="1wdqkvbycjk4wzzkpc0pyxvxrzqm48xbi8y87nax5l1v5qdfm1n0"; depends=[BioStatR boot ellipse ggplot2 gsl hypergeo jmuOutlier]; }; Modalclust = derive2 { name="Modalclust"; version="0.7"; sha256="0ymzdxp6rh6baih1xm6kj8l8jxjclvnmq0gfp38cl8lpskspb26x"; depends=[class mvtnorm zoo]; }; @@ -2554,7 +2602,7 @@ in with self; { ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2"; sha256="158ddbw2snlyzd2q6mdaif5i67kq4qfvadylwjxgv1w2cmszrmk6"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.5"; sha256="15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; - MomTrunc = derive2 { name="MomTrunc"; version="4.51"; sha256="078b36rn154wm9yk2d1q30d265wzwdyl7hx3wljqizdyz5jmvlk5"; depends=[mvtnorm]; }; + MomTrunc = derive2 { name="MomTrunc"; version="4.59"; sha256="1z4nd5c9443az69k55xb9r2v4slagl8dr60jq9frfi3v3ilmr7c6"; depends=[mvtnorm]; }; Momocs = derive2 { name="Momocs"; version="1.2.9"; sha256="13pgn31hv529z33mi020w8wm8ya7hyi5yfsp45a78wdhinqas9mm"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; @@ -2563,12 +2611,12 @@ in with self; { MonoPoly = derive2 { name="MonoPoly"; version="0.3-10"; sha256="0ls3sjfkinp9c5002ww0xm4l2galf20w2f45nm5irkk9sbqas0jq"; depends=[quadprog]; }; Monte_Carlo_se = derive2 { name="Monte.Carlo.se"; version="0.1.0"; sha256="1d5gp4wvpvrlp82g8k8v668mzhmdlk2pvky34v7hxysap9xgmsqr"; depends=[]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.6"; sha256="1jwq3by8zfy6sbzahcj5l0vicqn7yyqpb7xhfsaymfspm7xyq6pj"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; - MoonFinder = derive2 { name="MoonFinder"; version="1.0.1"; sha256="0crfh0g95vmwllvgppl2mjfd5kdlb0g9rwrxw8izbl0h6bpgcjxj"; depends=[annotate clusterProfiler igraph org_Hs_eg_db pheatmap RColorBrewer]; }; + MoonFinder = derive2 { name="MoonFinder"; version="1.0.3"; sha256="1lwjrzk68x1xxa10mk2zwaj6kwlryyad7wcd5vf85di5bbbvpm7n"; depends=[annotate clusterProfiler igraph org_Hs_eg_db pheatmap RColorBrewer]; }; Morpho = derive2 { name="Morpho"; version="2.7"; sha256="0zgq79yfgkl6g404j9hpdaza5m5qkklh1xpf9xpmyf940pqdw21c"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; MortCast = derive2 { name="MortCast"; version="2.1-2"; sha256="0p5cjzrl3yhrbhjr31fm84rj7dl7n65qzccj447ky1lvb4c0v2x1"; depends=[wpp2017]; }; MortalityGaps = derive2 { name="MortalityGaps"; version="1.0.0"; sha256="0nfm8xa7gnshrl8hsvmvr3za8nbppp7f7i5h4ni204w7xwvh8jxc"; depends=[crch forecast MASS pbapply]; }; - MortalityLaws = derive2 { name="MortalityLaws"; version="1.8.0"; sha256="09k1mxins6ch11h412yw7ywyiyjrrbs17jbxmrg6m2vnasn07bss"; depends=[minpack_lm pbapply RCurl tidyr]; }; + MortalityLaws = derive2 { name="MortalityLaws"; version="1.8.2"; sha256="0bdivv1qxk3ckpqa5n6fhwy8m0i24f8q84iaijv0k8xrq63056ls"; depends=[minpack_lm pbapply RCurl tidyr]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; MortalityTables = derive2 { name="MortalityTables"; version="1.0"; sha256="07pbjgc4qvznw1rfvmz6ndg0gzj0k61iajwn51ijpb7hscwi8937"; depends=[ggplot2 scales]; }; MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; }; @@ -2584,7 +2632,7 @@ in with self; { MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; MultEq = derive2 { name="MultEq"; version="2.3"; sha256="0fshv7i97q8j7vzkxrv6f20kpqr1kp9v6pbw50g86h37l0jghj7r"; depends=[]; }; - MultNonParam = derive2 { name="MultNonParam"; version="1.2.8"; sha256="1svy06syp6qdsn55zc0wgm3rr5a7j4kkhxxsmnkzzrz3nvj9g6s4"; depends=[]; }; + MultNonParam = derive2 { name="MultNonParam"; version="1.3.0"; sha256="13xkwyvqqjvs5nv383y3hy1w0mz2qmqwih5rh9dqs7r7afx7928n"; depends=[]; }; MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; MultiFit = derive2 { name="MultiFit"; version="1.0.0"; sha256="1i15m30bnydxyghp8jpfr6rs2gnilbw38d6ifs2jzdr83qbxyls3"; depends=[data_table Rcpp RcppArmadillo]; }; @@ -2611,7 +2659,7 @@ in with self; { Myrrix = derive2 { name="Myrrix"; version="1.2"; sha256="05x2h4ppjhfm0wlpwyp8ycjg59qj3gv0yqdilxrzb1lkrzln92xb"; depends=[Myrrixjars rJava]; }; Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; }; N2H4 = derive2 { name="N2H4"; version="0.5.4"; sha256="1sdxfi4618q9kz18ns1i1i2g5r0c4b6ydijaaxr21z206zi5i5wb"; depends=[dplyr httr jsonlite lubridate rvest tibble tidyr xml2]; }; - NACHO = derive2 { name="NACHO"; version="0.5.6"; sha256="0l1irmmhpmmhgm18i1lp3cxmmn2vjxvv747lxvah4pnxla88wcb6"; depends=[dplyr ggbeeswarm ggplot2 ggpubr ggrepel gtools purrr scales shiny tibble tidyr]; }; + NACHO = derive2 { name="NACHO"; version="0.6.1"; sha256="14aypwfgal975qy6i5ffjg9p154xaqaaznkdikj0iw5ah9w9n3fw"; depends=[dplyr ggbeeswarm ggplot2 ggpubr ggrepel gtools knitr magrittr rmarkdown scales sessioninfo shiny tibble tidyr]; }; NADA = derive2 { name="NADA"; version="1.6-1"; sha256="1jjlm6rljk4nv6b7l2w3xnj31j61wq30sp5pnna8wav6gyjqjfmb"; depends=[survival]; }; NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; }; NAM = derive2 { name="NAM"; version="1.7.3"; sha256="12d2yjl0af2ailvwk30fswalx1wzyj500qbrhiczsg1vr4rcqhkh"; depends=[Rcpp]; }; @@ -2624,7 +2672,9 @@ in with self; { NBLDA = derive2 { name="NBLDA"; version="0.99.0"; sha256="1fd6f43yhwvdb81r0b9hpmna5bphhqcgwiwjkpdyqz4h9cdmsj21"; depends=[ggplot2 sSeq]; }; NBPSeq = derive2 { name="NBPSeq"; version="0.3.0"; sha256="0l4ylxhs2k9ww21jjqs67fygk92avdchhx2y1ixzl7yr2yh1y9by"; depends=[qvalue]; }; NBShiny = derive2 { name="NBShiny"; version="0.1.0"; sha256="0hcmdhj26hc3c8d5nb6yb7amv0rbdxywima0l0jqkxipx56idlcx"; depends=[caret dplyr e1071 rhandsontable rmarkdown shiny]; }; - NCA = derive2 { name="NCA"; version="3.0.1"; sha256="11ajnhx840z5122ir2ijxcwqyr535acq4dnp7mah4h1y45krfdms"; depends=[ggplot2 gplots KernSmooth lpSolve progress quantreg sfa]; }; + NBShiny2 = derive2 { name="NBShiny2"; version="0.1.0"; sha256="0w4f19av8zl220zq3flmlqn86ivikclnsnkd7bc1wafhr12hmygp"; depends=[caret dplyr e1071 rhandsontable rmarkdown shiny]; }; + NCA = derive2 { name="NCA"; version="3.0.2"; sha256="135zh39c19gwka7j4qsnvmr0zy3qld07cqg72mzghspi88v4fi8n"; depends=[doParallel foreach ggplot2 gplots iterators KernSmooth lpSolve quantreg sfa]; }; + NCSCopula = derive2 { name="NCSCopula"; version="1.0.1"; sha256="0amxp9daqp9bhz61hrq1dk88ai5xfd5sp3538rf3xwgs6walycr4"; depends=[copula]; }; NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; }; NCmisc = derive2 { name="NCmisc"; version="1.1.6"; sha256="0ycc7b7z26a922hdjq8p4hjljjh09il24h3023k248pcsnbmka1a"; depends=[proftools]; }; NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; @@ -2632,12 +2682,14 @@ in with self; { NEArender = derive2 { name="NEArender"; version="1.5"; sha256="006128psqxbyw3z4wqflc4xsir3d641r4flwkxmv836lp7fc2d9a"; depends=[hexbin MASS RColorBrewer ROCR]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; - NFP = derive2 { name="NFP"; version="0.99.2"; sha256="1wnllzlww8257sbrgvfyvd21qvhf7j17mcpf6d4p6binaw8svnsb"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; + NFP = derive2 { name="NFP"; version="0.99.3"; sha256="18alq3nb47jyz0dh54y536a0igkfbh2x5nf2jxryfnizr47qc3a5"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; NFWdist = derive2 { name="NFWdist"; version="0.1.0"; sha256="0833lg0pd763awrc6ibidwf2ldl79w9lmm5acq4bnpd2hzsx60l8"; depends=[]; }; + NGBVS = derive2 { name="NGBVS"; version="0.1.0"; sha256="0ap8hq3n8xxlvp20f90prksy6lfnrwqb3k32npnx3d78j1cd7qdq"; depends=[ghyp Rfast]; }; NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; }; NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; }; NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; }; - NHMSAR = derive2 { name="NHMSAR"; version="1.12"; sha256="034cjzbwyf5jkj24wf9s6dij7g416psd2iz7fjrg34q9ax2kzyyl"; depends=[glasso lars ncvreg ucminf]; }; + NHMM = derive2 { name="NHMM"; version="3.10"; sha256="058p0lyizqhdhapvjxk2c7n0bpid340hv1dn0cypy5w12y7zml4s"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; + NHMSAR = derive2 { name="NHMSAR"; version="1.15"; sha256="0fbv5jjrzir9i84pidigjhfnjyyzhnhi7j1mn7cx58wlh9qn9ark"; depends=[glasso lars ncvreg ucminf]; }; NHPoisson = derive2 { name="NHPoisson"; version="3.2"; sha256="0k6m6ampp7g95d0jm5msvrgc12rqirpanb1ykbdf1ii027pqpwsn"; depends=[car]; }; NHSRdatasets = derive2 { name="NHSRdatasets"; version="0.1.2"; sha256="0xiqbqq7xjyi1vxza853ylyiq4nqr6y10x8i13c2kj756biz4h1n"; depends=[]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; @@ -2653,17 +2705,19 @@ in with self; { NMF = derive2 { name="NMF"; version="0.21.0"; sha256="1qq25n3k5sgh3srlshb3ic6q92s12c1ilqf5cd5anvq6cqfchc1v"; depends=[cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; NMFN = derive2 { name="NMFN"; version="2.0"; sha256="0n5fxqwyvy4c1lr0glilcz1nmwqdc9krkqgqh3nlyv23djby9np5"; depends=[]; }; NMI = derive2 { name="NMI"; version="2.0"; sha256="1rxphy9rhy9zhdiz48dvl9m26x6k681lnyn39lqxs0a6jhrxg7y3"; depends=[]; }; - NMOF = derive2 { name="NMOF"; version="1.6-0"; sha256="0m97xi1bpq1gw18fn512blh0li6xv2yfipf2c3aj7bwaq91wv12l"; depends=[]; }; + NMOF = derive2 { name="NMOF"; version="2.0-1"; sha256="1p3qkgw255wn1xzrjp9bgvblmkpi3ngrv57m88r54s5m90h72z26"; depends=[]; }; + NMVANOVA = derive2 { name="NMVANOVA"; version="1.1.0"; sha256="1jlqyg5vn7j8srvifjghd5a7820kadl8kbwib4qxalrfprq81h8p"; depends=[]; }; NNLM = derive2 { name="NNLM"; version="0.4.3"; sha256="0p7p26070w2j57z5i89pmpgd470yh2z0rrfzpalzdngc8mzp2rkj"; depends=[Rcpp RcppArmadillo RcppProgress]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.1"; sha256="1w2i4xlx249p589yqdgbx1ra406ycxw729vbk1lqadbn71m6blaz"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.4.5"; sha256="03b9xf5glzalxqal4s955kpddvxbry46ihgp4aibmnr12g7ayp1c"; depends=[data_table doParallel rgl stringr]; }; + NNS = derive2 { name="NNS"; version="0.4.7.1"; sha256="10hb06wdd8fn0rp32hagaqf19ig4fi16rd8l3h888vlzfwfrw83w"; depends=[data_table doParallel rgl stringr]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; NORRRM = derive2 { name="NORRRM"; version="1.0.0"; sha256="06bdd5m46c8bbgmr1xkqfw72mm38pafxsvwi9p8y7znzyd0i6ag3"; depends=[ggplot2 SDMTools]; }; NORTARA = derive2 { name="NORTARA"; version="1.0.0"; sha256="1q4dmn5q939d920spmxxw08afacs3pzhr2gzwyqa5kn8xiz4ffg8"; depends=[corpcor Matrix]; }; + NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.2"; sha256="0fxcs2l6g1gkvydl04ippkq192jn0zl2c304ww4hczzpvn7l8lsp"; depends=[Rcpp]; }; NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; - NPCD = derive2 { name="NPCD"; version="1.0-10"; sha256="1ag7j1r9j3piisg706hyhq8vaqfqvm1blxpkfxx7r1impjyqzyai"; depends=[BB R_methodsS3 R_oo]; }; + NPCD = derive2 { name="NPCD"; version="1.0-11"; sha256="107i33z4q5w2828sm0pm8234kmp1v3a2w72lmhvi0rpnjhg0x120"; depends=[BB R_methodsS3]; }; NPCirc = derive2 { name="NPCirc"; version="2.0.1"; sha256="1pyckjvf4vzns9hxnhnk7cm4abllmdj3f142pvjhnilyqwndqgyc"; depends=[circular misc3d movMF plotrix rgl shape]; }; NPHMC = derive2 { name="NPHMC"; version="2.2"; sha256="000x9y00gfkaj5lf00a55b9qx15x05yp3g3nmp8slyzsnfv66p5d"; depends=[smcure survival]; }; NPHazardRate = derive2 { name="NPHazardRate"; version="0.1"; sha256="0na4iphva1dadz457ii8kxrhnki2asaxpbwr824rljyrldj9rcgg"; depends=[survival]; }; @@ -2677,9 +2731,9 @@ in with self; { NPsimex = derive2 { name="NPsimex"; version="0.2-1"; sha256="1k9i1f5ckvzdns8f5qnm2zq7qs3wsgzsnfwdz21zmhmi6d0pwchm"; depends=[]; }; NSM3 = derive2 { name="NSM3"; version="1.12"; sha256="0spkzx2zm8q85h7ij9r52bsqlwgw2fsc7zw3aaz8644q0xlnjnvj"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; NSO1212 = derive2 { name="NSO1212"; version="1.0.0"; sha256="1yk07n9ksbazj27sax5jhs5f84zy80awrvkhziclsqm3h1g3h7w5"; depends=[httr jsonlite]; }; - NST = derive2 { name="NST"; version="2.0.3"; sha256="1viks9lwsbd48w7fa8rscav3pchfcxrsc7h4jgz7114cq4334y9q"; depends=[ape permute vegan]; }; + NST = derive2 { name="NST"; version="2.0.4"; sha256="0kwdfqr30av50k1s8sdf7714kzq9z1qrg85c3r7ljzrajj16vnl3"; depends=[ape permute vegan]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; - NScluster = derive2 { name="NScluster"; version="1.3.1"; sha256="0qiyw5zb0y45p9agagwz9b3c6njv5x2np0xbggqnkc62593xb9mr"; depends=[]; }; + NScluster = derive2 { name="NScluster"; version="1.3.4"; sha256="1bkzmm573ic6xrsqbbln865rfw2xnmby632m3jcgamddxppx3fjf"; depends=[]; }; NTS = derive2 { name="NTS"; version="1.0.1"; sha256="12kv49mkkqv4hqm784vgvhxbvs9jdsg4n54x0qdhfxv26n3a0fvm"; depends=[dlm MASS MSwM Rdpack tensor]; }; NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.2"; sha256="0s6gm3adc9qdh94pxzgccbxx1f1lbgqyvd4xk37xp6f3b5hwljdz"; depends=[snowfall]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; }; @@ -2694,7 +2748,7 @@ in with self; { NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; - NetLogoR = derive2 { name="NetLogoR"; version="0.3.5"; sha256="0nwzpn4qdw5idx9r69nh7bhn8hphjiysqyx721jl0qchp8ssbg51"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; + NetLogoR = derive2 { name="NetLogoR"; version="0.3.6"; sha256="02i9jd6sksxkbnm3ldadp1xfmhkb27n5ahhgs70fg2g5nhc2jxs9"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; NetMix = derive2 { name="NetMix"; version="0.1.4"; sha256="0sl5wrb86fvrjrq1qj3w2c7qg052y07wai53w0az2rfs1slf0af9"; depends=[clue gtools igraph lda Matrix Rcpp RSpectra]; }; NetOrigin = derive2 { name="NetOrigin"; version="1.0-3"; sha256="162dhyx7z1nd3z14lfvm3dz0qwwvrc3n17zswbnwcfj6g1b1p2f1"; depends=[colorspace Hmisc igraph]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; @@ -2704,14 +2758,14 @@ in with self; { NetWeaver = derive2 { name="NetWeaver"; version="0.0.6"; sha256="058fi3vbp11mbg69n4yp1zf48akfdl6s2p0qpa0v6ngmk2zjk0bq"; depends=[]; }; NetworkChange = derive2 { name="NetworkChange"; version="0.5"; sha256="1n4nnnds8m0waa64b1k14ph1jdj26pd6fphsd53ad5lpyglpzq0y"; depends=[abind GGally ggplot2 ggrepel ggvis gridExtra igraph LaplacesDemon MASS MCMCpack mvtnorm network qgraph RColorBrewer reshape rlang Rmpfr sna tidyr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.2.1"; sha256="0a4v69p1xykzb4s9sqj2bqm333a6sx2j8f8jdnp3l7dlkwg9clqp"; depends=[IsingFit IsingSampler Matrix qgraph reshape2]; }; - NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.1"; sha256="17x0is591580zqc2p5v8nwsd6n35mfwalyd15mlgirdcpz1s9wrs"; depends=[CovTools doParallel foreach igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; - NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.0"; sha256="1scza639kf3zzz2yd9q31wsvxpvpq8hbx82a206jkxlxb4dq6vxr"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; + NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.2"; sha256="1sd5pnm95l0w3737gyrjxhxvnx4wgz72mw5d5q8vp3vygxagx86h"; depends=[doParallel foreach igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; + NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.1"; sha256="1958kpdcqp4hhkqmfjg2qnrzhwcmfkbgdriq9iyqmmcr7qm8c1y7"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; NetworkInference = derive2 { name="NetworkInference"; version="1.2.4"; sha256="1x63szbns8wf3k89ibk2p66prngw4fr2ckfn1568mnxdwnzvhrb4"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; }; NetworkSim = derive2 { name="NetworkSim"; version="0.1.0"; sha256="1gvhzlmq46p99wald4pjnv9wxxqdympjkh3bzi98qa7qi84lny7y"; depends=[igraph incgraph]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.3.1"; sha256="0gpqknb8c816aw8w9bgn42zs805k2sa7qhpmizld6hvaq71g7847"; depends=[corrplot doParallel fdrtool fitdistrplus foreach igraph MASS Matrix ppcor psych pwr qgraph R_matlab wTO]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.3.2"; sha256="0dh9c2iwvg3mn6gfi3yihf2436bzl3vqhav22n2q6amq17b5p3va"; depends=[corrplot doParallel fdrtool fitdistrplus foreach igraph MASS Matrix ppcor psych pwr qgraph R_matlab wTO]; }; NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.2"; sha256="0d73rbp8v0k0j8dp4yigan7krhglx6qfbadvyg7nsj67xc00vbfd"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; - NeuralSens = derive2 { name="NeuralSens"; version="0.0.9"; sha256="12ka1lsfqs2mr35n41fv2rdzhnzvssa6hplzkxmxfh8mylp375j5"; depends=[caret fastDummies ggplot2 gridExtra Hmisc NeuralNetTools reshape2 stringr]; }; + NeuralSens = derive2 { name="NeuralSens"; version="0.1.0"; sha256="1ay8jvdm2rc5z8y761mk1l5yszcxixiwin0dr91f9dzws3yjlkrg"; depends=[caret fastDummies ggforce ggplot2 gridExtra Hmisc NeuralNetTools reshape2 stringr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; NewmanOmics = derive2 { name="NewmanOmics"; version="1.0.4"; sha256="1ny1w4kwdgfzm4jsj6mf3k0c10bwzwz4gmpb5vg3qffddly9wfaz"; depends=[oompaBase]; }; NightDay = derive2 { name="NightDay"; version="1.0.1.1"; sha256="1gwwxk428gkvci4dhfb3zikvidalpqkl0q2r6qpm58c12j14jk1h"; depends=[maps]; }; @@ -2725,7 +2779,7 @@ in with self; { NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; NonCompart = derive2 { name="NonCompart"; version="0.4.5"; sha256="0z2iigr8nsyanx9lnf7hq5d5fbnm1kd3ir2scfhaqafxa8y8byq9"; depends=[]; }; NonNorMvtDist = derive2 { name="NonNorMvtDist"; version="1.0.1"; sha256="135scrxwm52fg4drxfr8dgwp2jrgdgbi3fq13i4cka3i99bpx4lm"; depends=[cubature]; }; - NonProbEst = derive2 { name="NonProbEst"; version="0.2.1"; sha256="1ypwx79zysyr2mz3sayprw33dhasc4k2d90i3v3aafdb2jhi6ygp"; depends=[caret e1071 sampling]; }; + NonProbEst = derive2 { name="NonProbEst"; version="0.2.2"; sha256="0rkdl81l6rnxg36h0qqwwpvsqa9c64yc3gld3xynq4z0flvnqwkq"; depends=[caret e1071 sampling]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; Nonpareil = derive2 { name="Nonpareil"; version="3.3.4"; sha256="1hhshcggfv92ll5zqh8hd3pldp07n0684yh1252z2jv2vbl87v3z"; depends=[]; }; NormExpression = derive2 { name="NormExpression"; version="0.1.0"; sha256="1j4q8mb70ig40acfd9kfy12vxdvq3qpf53rxh47kkw8mywnd0449"; depends=[]; }; @@ -2736,19 +2790,19 @@ in with self; { NormalizeMets = derive2 { name="NormalizeMets"; version="0.25"; sha256="0hnyr2aklibbvs6b6q4l0zbb9g8qmp2ds4lqic8a9alqn66sfnf2"; depends=[AUC crmn e1071 GGally ggplot2 htmlwidgets impute knitr limma plotly rmarkdown]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; - Numero = derive2 { name="Numero"; version="1.3.1"; sha256="058mxg2azfb14anyw576j7fyscxd1kk26jsc9rn9i7hh9gmnrjv6"; depends=[Rcpp]; }; + Numero = derive2 { name="Numero"; version="1.3.3"; sha256="0n4mi354g1a7v5lczc1ax9yykv2h3dg6kcy2f67wzzwvgbjgz691"; depends=[Rcpp]; }; NutrienTrackeR = derive2 { name="NutrienTrackeR"; version="0.99.2"; sha256="1vzha3ywjbd877fqy3r2xkgi8m44s3ss65bij0vcc4mx8lajhgb5"; depends=[ggplot2]; }; OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-0"; sha256="1c57jxb9n397wdkrirbfh70sxllrg9zsy0np698z7kcx83rz5lqr"; depends=[curl xml2]; }; OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; }; OBRE = derive2 { name="OBRE"; version="0.1-0"; sha256="1sxfb8mn0ky8x177l3v6wwcr96h5hfwd718h1akwrpir7acldchl"; depends=[pracma]; }; - OBsMD = derive2 { name="OBsMD"; version="5.0"; sha256="1fwp5dv6yh5pkkjn1gns97mbifzjp4cm8wnfmdc1rifr6jijr624"; depends=[]; }; + OBsMD = derive2 { name="OBsMD"; version="5.3"; sha256="10acj6d0nvf1zyirp001c2fhsg2gq33zywnp8w70gm1dk7pgzfzr"; depends=[]; }; OCA = derive2 { name="OCA"; version="0.1"; sha256="0kaf46gic8gp8f98y68kqvgm1baicwgvarfiwry1j0bd2rjad64d"; depends=[]; }; ODB = derive2 { name="ODB"; version="1.1.1"; sha256="1hha4rkbc2zh3karkqa0vn4v0nmcd7sljcymy1nh28bx1gx2ffgs"; depends=[DBI RJDBC]; }; ODEnetwork = derive2 { name="ODEnetwork"; version="1.3.1"; sha256="0j6kw32hq9gfiwmyh4zxx7ibfxplhass7q309y8r656lkhvr9nin"; depends=[checkmate deSolve]; }; ODEsensitivity = derive2 { name="ODEsensitivity"; version="1.1.2"; sha256="0yddv5h3y0xfviqjgrbixawd00jc1rh9ngckfqka5j855vhchh66"; depends=[checkmate deSolve ODEnetwork sensitivity]; }; ODS = derive2 { name="ODS"; version="0.2.0"; sha256="0i7giibass7hadvv6mb7k9xrykgfss57jmm6gpbym8qcywhzq4ny"; depends=[cubature survival]; }; OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; }; - OECD = derive2 { name="OECD"; version="0.2.3.999"; sha256="02bldn2c5cnjx171ckqrrb06v50m7zps20sb6k1crmx550vmgajc"; depends=[httr rsdmx xml2]; }; + OECD = derive2 { name="OECD"; version="0.2.4"; sha256="1cxjd5h10ynjzblk5d5crdknk19pn8ik37d8hffvz5iydp7ammqn"; depends=[httr rsdmx xml2]; }; OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; }; OHPL = derive2 { name="OHPL"; version="1.4"; sha256="0svim112khdymdj1bsj8vri6r0zph5312y148mlh5h98rah40i08"; depends=[glmnet mvtnorm pls]; }; OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; @@ -2767,6 +2821,7 @@ in with self; { OSCV = derive2 { name="OSCV"; version="1.0"; sha256="17wrfak6b6m2l3iqbhdwcfh0rlqb14rkvrbari7v46gya9v7hq20"; depends=[mc2d]; }; OSDR = derive2 { name="OSDR"; version="1.1.3"; sha256="059sj003zsrabmjfhwvvpi599ssrckcqpiw2b3vz405ljnhjmlap"; depends=[]; }; OSMscale = derive2 { name="OSMscale"; version="0.5.1"; sha256="0rjhyhh1iafgd9h1pbd2clyg2sh0gg7y1aqmiislqyn6h6jrvgqn"; depends=[berryFunctions OpenStreetMap sp]; }; + OSNMTF = derive2 { name="OSNMTF"; version="0.1.0"; sha256="0g83wqh97iz3g4ganj2dy3biyn8cmb0v8zz6rydald1hfszj8aa2"; depends=[dplyr MASS]; }; OSTSC = derive2 { name="OSTSC"; version="0.0.1"; sha256="0p92w25xvajsn44rd5hg1m7l9l4m0rpmw175nnqr438432hqh7cc"; depends=[doParallel doSNOW fields foreach MASS]; }; OTE = derive2 { name="OTE"; version="1.0"; sha256="18w483syhs523yfib9sibzmj16bypqxk4sc4771kfr1958h3igai"; depends=[randomForest]; }; OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; @@ -2786,7 +2841,7 @@ in with self; { Omisc = derive2 { name="Omisc"; version="0.1.2"; sha256="0ww83srfc7vr1gw2aaa5bahs6lvm11j4057hn06pclz1wb6fnbyw"; depends=[copula MASS psych]; }; OmnibusFisher = derive2 { name="OmnibusFisher"; version="1.0"; sha256="0x3q04g45nixgsrl4biqqi6bk4kx79spq5whm3n4ppr0nkv8dw4h"; depends=[CompQuadForm stringr survey]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; - OncoBayes2 = derive2 { name="OncoBayes2"; version="0.4-4"; sha256="1mvx0c8a5nh9dz77xiyy6qpi66jr82axn5yckp61qmc6b3k702hd"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 RBesT Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; + OncoBayes2 = derive2 { name="OncoBayes2"; version="0.5-4"; sha256="0y6kqqv93bh1skr8cm95saycs2k9jxq8nhkf8cc29p3nak205f7c"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 RBesT Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; }; OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; }; @@ -2794,10 +2849,10 @@ in with self; { OpVaR = derive2 { name="OpVaR"; version="1.0.5"; sha256="14kq95i8n0g1wy3s32llw3803qzkxlyz9307clc1bwzi0wp22x5f"; depends=[actuar evmix goftest MASS pracma ReIns tea truncnorm vcd VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; OpenCL = derive2 { name="OpenCL"; version="0.1-3.1"; sha256="0vxfsvin35idgvmc22178bq0r5193pdzba3wwv9djz52fzbj7zys"; depends=[]; }; - OpenImageR = derive2 { name="OpenImageR"; version="1.1.5"; sha256="13bkjwhxvnx7maj009bcpfx85cr08nnghlil75xbyv44ry0gr1ka"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.1.6"; sha256="1yl7xvb86vxyf8d5g58hhmrva0gyg8iabb9npsdlnl8j0bg5gfiw"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; OpenML = derive2 { name="OpenML"; version="1.10"; sha256="132swv22ymm0wxq8y65y2niq8chmga1mnl1lgn6m3cgljvwad47r"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.14.11"; sha256="14p98mhn7516sxn52kwsjkx84lycx9vw2wy388aivbmpqcbav68z"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.15.4"; sha256="012iclwgh9amhhbxg90ghfjv5iwv8w25brwwp3gbas5qlwygk61a"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.12"; sha256="02p9b2y99z9yrrm2pl86p0yqwah0yjic2wdcd4k0mhccimmmkaip"; depends=[abind colorspace GPArotation openxlsx plyr psych pvclust rgl stringr XML]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.4"; sha256="0kyv14lxi86n6aba4jqmsfpmn075k0ki34q6gkkvhq8yv48wg831"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; @@ -2810,7 +2865,7 @@ in with self; { OptimClassifier = derive2 { name="OptimClassifier"; version="0.1.4"; sha256="0f1szin0isji60gvb0zi240gri6fc4y1s71n96dn5wacdx5b8mhb"; depends=[clisymbols crayon dplyr e1071 ggplot2 lme4 lmtest MASS nnet nortest rpart]; }; OptimaRegion = derive2 { name="OptimaRegion"; version="1.1"; sha256="1bikc12a5v3q7f26r14pdfmnxpyqzxa94a10mx5g954km3a329ly"; depends=[boot DepthProc fields geometry magrittr mclust nloptr Rdpack Rdsdp rsm spam stringr]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-4"; sha256="0n2vmzkc733yzs155zdj2n8ng74x9hy4m91fl7fac8d4gnrnc8yg"; depends=[]; }; - OptimalDesign = derive2 { name="OptimalDesign"; version="0.2"; sha256="1gpcasdbcgqqr1l6f63q4jqva28rpz0cbgs1f4l3bizldd9kf4kh"; depends=[]; }; + OptimalDesign = derive2 { name="OptimalDesign"; version="1.0.1"; sha256="02vxxb25q7fl73y7zq0a89ra0s88wji4mrql7p88014p073lj2as"; depends=[lpSolve Matrix matrixcalc matrixStats plyr quadprog rgl]; }; OptimalTiming = derive2 { name="OptimalTiming"; version="0.1.0"; sha256="1mchb7wdk1v56la30ivi40aq6zma64lrdb94d64d0s7x67m8315w"; depends=[mstate survival]; }; OptionPricing = derive2 { name="OptionPricing"; version="0.1"; sha256="0j98h3fn29xfv7xyp7av459v56chw99pnvmsbqvrv4g77p60f5q2"; depends=[]; }; Orcs = derive2 { name="Orcs"; version="1.2.0"; sha256="0fwji4w2089zlcjbsbz9pmy54ryl4y10kxms836v1dxrjc5az3sp"; depends=[bookdown knitr lattice latticeExtra plotrix raster Rcpp remotes rgdal sf sp]; }; @@ -2822,7 +2877,6 @@ in with self; { OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; }; OrthoPanels = derive2 { name="OrthoPanels"; version="1.1-3"; sha256="1bjwly22aawd2k4wqwjiaysivvwiv2zd9fyzcqsvldkq54zaszxn"; depends=[MASS]; }; OscillatorGenerator = derive2 { name="OscillatorGenerator"; version="0.1.0"; sha256="0zqw8l955msxkdviw5vd493749zwc22qby9mfmyqnqqmq0pyjw4w"; depends=[]; }; - OsteoBioR = derive2 { name="OsteoBioR"; version="0.1.1"; sha256="010l1xhsns1mmc6x6w1kpvzlxms5b92yg379ym2shldyy9dkaj3r"; depends=[BH ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; }; OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; }; OutlierDetection = derive2 { name="OutlierDetection"; version="0.1.1"; sha256="0z4797j2gr37c1jnhivczff3y2dd2kilyncc087ihpwaa26wv0nl"; depends=[DDoutlier depth depthTools ggplot2 ldbod plotly spatstat]; }; @@ -2830,7 +2884,6 @@ in with self; { OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; OwenQ = derive2 { name="OwenQ"; version="1.0.2"; sha256="00c8cv8bawmlswjhqrhb218vvl7k7ljw85iwbwwrhxf3hpm9mcz3"; depends=[BH Rcpp RcppEigen RcppNumerical]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; - P2C2M = derive2 { name="P2C2M"; version="0.7.6"; sha256="07ycl22v03b2xdaw4v0l6layqhab431ma38qywzm96hkl3ywvl49"; depends=[ape ggplot2 rPython stringr]; }; PAC = derive2 { name="PAC"; version="1.1.1"; sha256="07f83i43nxf1s2c26kkpcv4iyq517w20y1l7yg41wnmbfi9xlk7s"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; }; PACLasso = derive2 { name="PACLasso"; version="1.0.0"; sha256="1qzzymhfsjy8mk0r0xpd5h4wrx4wk8gq3vi6fnawkq5xkrg26rld"; depends=[lars limSolve MASS penalized quadprog]; }; @@ -2848,7 +2901,7 @@ in with self; { PATHChange = derive2 { name="PATHChange"; version="1.0"; sha256="1pmxhaych01cywx9bb5z0p5lbxcma7x6nlprivpx3gnpg7m9srpg"; depends=[rlist stringr VennDiagram]; }; PAWL = derive2 { name="PAWL"; version="0.5"; sha256="1sx4g4qycba2j1fm0bvhz3hk6ghhdc37rz5zi1njqxrpmbnkqg04"; depends=[foreach ggplot2 mvtnorm reshape]; }; PAmeasures = derive2 { name="PAmeasures"; version="0.1.0"; sha256="0c2pkms06lijly9clxp6zkasqy4zjicdwnvbqwvhp45yavwmkkkj"; depends=[survival]; }; - PAutilities = derive2 { name="PAutilities"; version="0.2.0"; sha256="06q77mr2g448n3avps9bsy16yacahqhxvrbp3yyv2qxqsnjxvf7m"; depends=[dplyr ggplot2 lazyeval lubridate magrittr matchingMarkets rlang]; }; + PAutilities = derive2 { name="PAutilities"; version="0.3.0"; sha256="0lx9z92127sqwsgfs2bl8cacpgncs2ignr53l9pclyln9iwdfg5v"; depends=[clues dplyr equivalence ggplot2 lazyeval lubridate magrittr matchingMarkets reshape2 rlang]; }; PBD = derive2 { name="PBD"; version="1.4"; sha256="1n8gq8ms6gszr469hblipbgalc5m7gfiknpsbqywxml62sr4wbsb"; depends=[ade4 ape DDD deSolve phytools]; }; PBIBD = derive2 { name="PBIBD"; version="1.3"; sha256="0zh73bsiwmsqw1vhs2dazndsf0894kfv3vfv88wr4fnh7njysz6r"; depends=[]; }; PBImisc = derive2 { name="PBImisc"; version="1.0"; sha256="18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl"; depends=[lme4 Matrix]; }; @@ -2869,9 +2922,10 @@ in with self; { PCICt = derive2 { name="PCICt"; version="0.5-4.1"; sha256="17ipmv6ps7c9dv4k9kxjjynnlgr63baz9z9ndwfg0lckc3vw81ya"; depends=[]; }; PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; PCMBase = derive2 { name="PCMBase"; version="1.2.10"; sha256="0q84dd9a59c8pzv4pabcxlxxn37pxm5ya5pa800d3m34fd02h8i3"; depends=[ape data_table expm ggplot2 mvtnorm xtable]; }; + PCMBaseCpp = derive2 { name="PCMBaseCpp"; version="0.1.7"; sha256="0sri6aqbx1bx32342j20jchsp4v4r7hl6xwcxidxph3ivixzn7qj"; depends=[abind data_table PCMBase Rcpp RcppArmadillo]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.6"; sha256="0mihkivlpycqbzc3z8clsmiqg3c6hqnapk29h794lf99had03hp8"; depends=[ape phylobase picante RcppArmadillo SYNCSA vegan]; }; - PCRedux = derive2 { name="PCRedux"; version="0.2.6-4"; sha256="0nya5fx06mic7knfkzddny9lxqwk039kz0d3mf32rixwlbhrdlr5"; depends=[bcp caret changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR randomForest robustbase testthat visdat zoo]; }; + PCRedux = derive2 { name="PCRedux"; version="1.0-2"; sha256="08c8na83q0vynm3a1xz7r9ah7x33kwq4mjyfnqk46p6i3p1snqwm"; depends=[bcp changepoint chipPCR ecp fda_usc MBmca pbapply pracma qpcR robustbase shiny zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; PCovR = derive2 { name="PCovR"; version="2.7"; sha256="00920h0qlw81vwh46inmvm4mdv0dfd8xvqvrj7l038hhmjb7qsjz"; depends=[GPArotation MASS Matrix ThreeWay]; }; @@ -2914,11 +2968,11 @@ in with self; { PLordprob = derive2 { name="PLordprob"; version="1.1"; sha256="1g23h3121g9csr85falm6vgzbva42wz3skhfr2rxmvlc3ca4afyp"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.1"; sha256="0vlz89rhm5jxcpv18cpxa396qkqf0ywxhjh17ldbgrnqgsw76r7w"; depends=[impute]; }; PMCMR = derive2 { name="PMCMR"; version="4.3"; sha256="09bvdj2h1086r2cgy3myrhlylplxxlliv8nwx09c8kb1vn02i2ij"; depends=[]; }; - PMCMRplus = derive2 { name="PMCMRplus"; version="1.4.1"; sha256="076nzcnky3c3rp88b9vkqxsvws8jy81yb2aw8sa1ddz6b9hx0f4i"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; + PMCMRplus = derive2 { name="PMCMRplus"; version="1.4.2"; sha256="0n71q8kcmk1ibqn0fq9p60xrxx1dg7hszn11i51cmsx9695wwk28"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; PML = derive2 { name="PML"; version="1.1"; sha256="11fl7qm98n5wlfwczb6vzj9hswq7mqmb09nh9wl7986jp2wbrjlw"; depends=[dplyr rbokeh tibble tidyr trelliscopejs]; }; PMmisc = derive2 { name="PMmisc"; version="0.1.2"; sha256="03bavk7ylmrrcc49zy9fb2q08w6138b3srxa4x038syr115k3l6k"; depends=[ggplot2 robust]; }; PMwR = derive2 { name="PMwR"; version="0.12-0"; sha256="1w3zz3sh06vbyzngcpm52izi2ymnfy897q2zz7vrb6r8xxcbrlwi"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.3"; sha256="1mckjb6q7ffvzsifjwc411p9r1vykvczk6v7lcsmpzliifgc0ys4"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.5.0"; sha256="1b9p7r588klxmwcszffcmn37w5r29n4ab2f54xm23lnlpix80yg6"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; POCRE = derive2 { name="POCRE"; version="0.5.0"; sha256="0aph1lmb0xkzm4l4ah2wrx13d138igf4k4w9wb9lca4vv6m7xzqf"; depends=[EbayesThresh ggplot2 pracma]; }; POD = derive2 { name="POD"; version="1.1.4"; sha256="0ivq7jpnyb5zvvi2dx788cawrsh26hyp8j0a8mkfcsnhyhhs7hnb"; depends=[]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; @@ -2938,7 +2992,6 @@ in with self; { PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.3"; sha256="1x5rcls49jz19y3h98n2k4kypm8mv8p586clhdj62bvp2nl8wg3x"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; PQLseq = derive2 { name="PQLseq"; version="1.1"; sha256="1h8baf0apxvimarr2qwlh6pdzv88ib1dzw927swsyimjg44wjbfc"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; PREPShiny = derive2 { name="PREPShiny"; version="0.1.0"; sha256="0zsg07y6nhp2lma3pdz8xd981y3mh8k21il5jv0inma1d1xr4g3f"; depends=[dplyr psycho rmarkdown shiny]; }; - PRIMAL = derive2 { name="PRIMAL"; version="1.0.0"; sha256="1ivjgc6dczh6idhzjvxag0l8wpkxx9y52bcr6x21rk64kx57mj3h"; depends=[Matrix Rcpp RcppEigen]; }; PRIMME = derive2 { name="PRIMME"; version="3.0-0"; sha256="1wvwdsaqg5rqx93svvhjvi64x6vxbr0a8za0a7cixy0vdg14vli4"; depends=[Matrix Rcpp]; }; PRIMsrc = derive2 { name="PRIMsrc"; version="0.8.2"; sha256="04g1saf511xs26m1iv9xfsmfs15fdfaxh5qlbay2mcb198270pd8"; depends=[glmnet Hmisc quantreg superpc survival]; }; PRISM_forecast = derive2 { name="PRISM.forecast"; version="0.1.6"; sha256="0w0fjbaafq90ac35h70z8g95q1i812v0ivkif4lx8l3q7rhjrvb5"; depends=[glmnet xts zoo]; }; @@ -2952,21 +3005,22 @@ in with self; { PROscorer = derive2 { name="PROscorer"; version="0.0.1"; sha256="0mgj0mi0vzdk0agimsx4k9i4bss0j5lqiayzhldr1hrqrx2a4f3d"; depends=[PROscorerTools]; }; PROscorerTools = derive2 { name="PROscorerTools"; version="0.0.1"; sha256="1vliffkfqdn5l96bncfgayv19i20kmawlxi8q853wamj6npdpv5r"; depends=[]; }; PRROC = derive2 { name="PRROC"; version="1.3.1"; sha256="1m28h8pcd78049lz2qixhkcr9h5b3jik3maqzfbvq9y58z71i4a7"; depends=[]; }; - PRSim = derive2 { name="PRSim"; version="1.1"; sha256="0h4gncdnd48p7z1x3ja9gyi5mhmcbcr5fj8xqvlqfslvsdmsak1g"; depends=[goftest homtest]; }; - PReMiuM = derive2 { name="PReMiuM"; version="3.2.2"; sha256="1mw5arjg9jyiyvrlcxm1sxdn989jkjfhldncdjyzkp4qhns6cjjs"; depends=[ald BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; + PRSim = derive2 { name="PRSim"; version="1.2"; sha256="0fjcf1hbnwi4z7sk67chvvvkzf0n2scb7z0mxdnyhd0ggbn9p7a9"; depends=[goftest homtest wmtsa]; }; + PReMiuM = derive2 { name="PReMiuM"; version="3.2.3"; sha256="1znr1swz73n1ws657dvv56y6crmqicfllbz460vaw8a0dnjiqsc9"; depends=[ald BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; PResiduals = derive2 { name="PResiduals"; version="0.2-6"; sha256="11r0zn626s701hprjy634a7d3v3sq6lmlzpamv02609fg8wjhy9h"; depends=[Formula MASS rms SparseM]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; PSCBS = derive2 { name="PSCBS"; version="0.65.0"; sha256="16irvlc3ds7p03racjzyljqsc43bbwng3zsb0bmrkibmadfhcr9k"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; }; PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; }; PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; - PSM = derive2 { name="PSM"; version="0.8-12"; sha256="0h83b7bhslgnrq4442464i9iil6gjhw3pwxvgz5313pfk2km30vg"; depends=[deSolve MASS numDeriv ucminf]; }; + PSPManalysis = derive2 { name="PSPManalysis"; version="0.2.2"; sha256="0g59r13nc6w4a4gkjxnvkygp9hax1sw34a5rv6r170gwdj9fiswq"; depends=[pkgbuild]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; PSTR = derive2 { name="PSTR"; version="1.2.4"; sha256="0d1j7khd0fx9fapak6arigzprsl8f5jadspbyzym4g2a78m7cnnq"; depends=[ggplot2 magrittr plotly snowfall tibble]; }; PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; }; PTAk = derive2 { name="PTAk"; version="1.3-34"; sha256="0ylnag492v1n0pmzsz73w12frhv8c3r3dxgarf58ny0ir0i0ywvl"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.7"; sha256="1azkrij4kfmvp03lnzm88gwgvz8g54jq94j0qg8ynxvyjzrppc98"; depends=[doParallel foreach survival]; }; PTXQC = derive2 { name="PTXQC"; version="0.92.6"; sha256="1286yrbkkra4gwkx9rv40w568a2v5mngmr4yx76w02x37msa0dhg"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; }; + PTwins = derive2 { name="PTwins"; version="0.1.1"; sha256="166mc7w52n9d3n72h5jvvhbki87prkils3yigdf57dn9pyixrd66"; depends=[]; }; PUPAIM = derive2 { name="PUPAIM"; version="0.1.0"; sha256="0lkfp1jlcf0m0h7hqvbcr0sq0kbdwpvqvz52rs8j5n7ywiky4q3i"; depends=[FSA Metrics minpack_lm]; }; PUlasso = derive2 { name="PUlasso"; version="3.2.3"; sha256="07jf81q898833qswwairkv21dxlz7890219fdgnw3ywgp5kvlp41"; depends=[doParallel foreach ggplot2 Matrix Rcpp RcppEigen]; }; PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; @@ -2975,7 +3029,7 @@ in with self; { PWEALL = derive2 { name="PWEALL"; version="1.3.0"; sha256="0nb0v6wvj9ay90qcbrr9drg2g84fb7a9m78pzb69wp8789i8ixhk"; depends=[survival]; }; PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.2.100"; sha256="0fqzr5gng5miyslkxjkq0gmy1mi37bcjg8pb9vhs7dxa15dm332j"; depends=[cluster curl dplyr dygraphs geosphere ggmap glue httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaCoreUtils MazamaSpatialUtils openair png purrr raster RColorBrewer readr reshape2 rgdal RgoogleMaps rlang sf slippymath sp stringr tibble tidyr xts]; }; PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; }; - Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; }; + Pade = derive2 { name="Pade"; version="0.1.5"; sha256="12lq1ixh1axyalk7h86ris1s064v3dsc7p6xb868cm07qb132y36"; depends=[]; }; PairViz = derive2 { name="PairViz"; version="1.3.2"; sha256="01nzf7as848i3vpwgdm450x3f5lapfh2vgd59sy6qr80c19nfjl9"; depends=[graph gtools TSP]; }; PairedData = derive2 { name="PairedData"; version="1.1.1"; sha256="07y5fd4fkwfp0lbacf41ya8cn7x4n1haxl0cln9iibjffc1mbr5q"; depends=[ggplot2 gld lattice MASS mvtnorm]; }; PairwiseD = derive2 { name="PairwiseD"; version="0.9.62"; sha256="19qjms99gf7s39nwwgj56n8426d0gw80dipz165sk3km4zb2mcwv"; depends=[openxlsx xlsx]; }; @@ -2994,24 +3048,24 @@ in with self; { PanJen = derive2 { name="PanJen"; version="1.6"; sha256="18cl9rls98v286kk6lyxxws3w59zpzgmqi5250gdgcf71xy2lhvm"; depends=[mgcv]; }; PanelCount = derive2 { name="PanelCount"; version="1.0.9"; sha256="1b6c83qypjc3ylvhh24xm4pjk8w34s24v0i9ddlmg92f1518hlkj"; depends=[Rcpp RcppArmadillo statmod]; }; Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; - ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="0.1.2"; sha256="07kbx156n0i59q65zrfbnhaimyzh4kkp5gs57lknzinvjqqblwdd"; depends=[data_table dbscan foreach GauPro lhs]; }; + ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="0.2.0"; sha256="1sgb0wrk9h52v55qc4q0r11b7x7cjmjfk1klmmvigpjlz1dycz7k"; depends=[crayon data_table dbscan foreach GauPro ggplot2 lhs plotly]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; - ParallelLogger = derive2 { name="ParallelLogger"; version="1.1.0"; sha256="007linzn60bjs8nh1j1jzb292naxajjpkjwmhjc992h8himxfky4"; depends=[jsonlite snow XML]; }; + ParallelLogger = derive2 { name="ParallelLogger"; version="1.1.1"; sha256="0z2a777536yvqcypzxis7j4k3ns5v4lwdrkib9zx1ngxxzv6k9xn"; depends=[jsonlite snow XML]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; ParallelTree = derive2 { name="ParallelTree"; version="0.1.3"; sha256="1h53qwhc63fglm452b3by7f3g6f3hyqwkmwmbdqdb9rv3j4gvnvg"; depends=[ggplot2]; }; - ParamHelpers = derive2 { name="ParamHelpers"; version="1.12"; sha256="056cmgklr4a1385qjalr12mphaybc1x7a31qbhs319cbc3kbjkdm"; depends=[backports BBmisc checkmate fastmatch]; }; + ParamHelpers = derive2 { name="ParamHelpers"; version="1.13"; sha256="0yaf899yhia2773lkq5a16wz6srpsx7xzkbgf421ai2z90m23ddr"; depends=[backports BBmisc checkmate fastmatch]; }; ParentOffspring = derive2 { name="ParentOffspring"; version="1.0"; sha256="117g8h0k65f2cjffigl8n4x37y41rr2kz33qn2awyi876nd3mh93"; depends=[]; }; ParetoPosStable = derive2 { name="ParetoPosStable"; version="1.1"; sha256="1fwji5wrhbxr089dll812csamvb5q2pxn1607rpirarifgfbj28m"; depends=[ADGofTest doParallel foreach lmom]; }; PartCensReg = derive2 { name="PartCensReg"; version="1.39"; sha256="0blzv57cbxqghkz4fc3plvrcw80g0kx17dzmajkfv598m1wm6hc8"; depends=[Matrix optimx ssym]; }; Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="2.0"; sha256="0pb0digyigqyzb0zqikgz002kqf1xprcjhxr62a7iqbzy1yycayf"; depends=[]; }; PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; }; PatternClass = derive2 { name="PatternClass"; version="1.7.1"; sha256="11r4p4s2pm0c4fmnpijzz5srhpai444mbx5nszhkssfsp9rh7cm9"; depends=[SDMTools]; }; - Patterns = derive2 { name="Patterns"; version="1.1"; sha256="0j7riqf5i1prkky395g4nzc6pg5ci6w5jmjc49xjxyda9nlkaly0"; depends=[abind animation Biobase c060 cluster elasticnet glmnet gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls pixmap plotrix SelectBoost spls survival tnet VGAM WGCNA]; }; + Patterns = derive2 { name="Patterns"; version="1.2"; sha256="1dfy0jxr4h17j00yf2lfxlczvx6sdjz08hqsrj6r26qz3g6f16br"; depends=[abind animation Biobase c060 cluster elasticnet glmnet gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls pixmap plotrix SelectBoost spls survival tnet VGAM WGCNA]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; PeakError = derive2 { name="PeakError"; version="2017.06.19"; sha256="1d4v7s478zjz42dm6ps4nnqqyyqv84dgmzn1bp1a4qwnfv9vmfg7"; depends=[]; }; PeakSegDP = derive2 { name="PeakSegDP"; version="2017.08.15"; sha256="1ndf4d4ikcyqi0k51kil2jw777z4c1m4pda3dahrjmjyz0jhrhkw"; depends=[]; }; - PeakSegDisk = derive2 { name="PeakSegDisk"; version="2019.9.10"; sha256="02b8qmmmwaf3izgic1mj69ixpixadvnxsipnmv3kiy1km723j8js"; depends=[data_table]; }; + PeakSegDisk = derive2 { name="PeakSegDisk"; version="2019.9.27"; sha256="02qiqj989a9fihngvi74rbi970ifbn3kx0k419vdlhvlzwdny3i5"; depends=[data_table]; }; PeakSegJoint = derive2 { name="PeakSegJoint"; version="2018.10.3"; sha256="0f0dw6swhhf301j4ci3rs8cmzd39dcjlb0kqxpdh7f00gp3qn7da"; depends=[PeakError penaltyLearning]; }; PeakSegOptimal = derive2 { name="PeakSegOptimal"; version="2018.05.25"; sha256="0j39jzy4r0h787vs3klgbpcmb096ds3hzhvv5w3xs53kl0qkypj4"; depends=[penaltyLearning]; }; PearsonDS = derive2 { name="PearsonDS"; version="1.1"; sha256="0rqh9ji0bah3n1c6fcg7krgqs65qla9p3xrnc4jr7va6ph104im9"; depends=[]; }; @@ -3088,6 +3142,7 @@ in with self; { PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; }; PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.1.1"; sha256="01fw1zr1gr6nlcgw8dlc66b3ygkl6w571lw73p13h0q17y1i872d"; depends=[Rsymphony]; }; PostcodesioR = derive2 { name="PostcodesioR"; version="0.1.1"; sha256="1hwyc8i6a5rxlg3bvjcwayjmv858a050c3y4ig3ncaldifyky4lb"; depends=[httr]; }; + PosteriorBootstrap = derive2 { name="PosteriorBootstrap"; version="0.1.0"; sha256="0zzhz88f53l1nqynl3wq4yww9z1v354a16hhin4sdd7ha1iqi9cj"; depends=[dplyr e1071 ggplot2 gridExtra MASS Rcpp rstan StanHeaders tibble]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.7"; sha256="040wc7hxa8y6bm1rs7ip2skdxmmwksxkyb6xzqgdjp8m7a25fppb"; depends=[Rcpp RcppArmadillo]; }; Power2Stage = derive2 { name="Power2Stage"; version="0.5.2"; sha256="1837pc94syhyl5i0kjdmlc1h7ckas3vcpwhvhgh46sv022lrg2gi"; depends=[cubature mvtnorm PowerTOST]; }; @@ -3109,13 +3164,14 @@ in with self; { PriorGen = derive2 { name="PriorGen"; version="1.1.2"; sha256="0qvdqqdy7wdwwcq95mkgfyf7xf6xlpwdfs3gq299yyv2ba57flnm"; depends=[rootSolve]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; - ProFit = derive2 { name="ProFit"; version="1.3.2"; sha256="0knmlja0bclzl6v58kdmx5a649m2gyvm6497gbziqnj7vn28l3wg"; depends=[celestial checkmate cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; + ProFit = derive2 { name="ProFit"; version="1.3.3"; sha256="0jrw0v7dg5mf4zxg7pqybh9qzsiqb3nnz8g5qlc4iz73mhr9gm2b"; depends=[celestial checkmate cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; ProFound = derive2 { name="ProFound"; version="1.3.4"; sha256="1kn9kj0vq18jxiavdzx4l4kgyfwjnflfbyqfdihrdfrkz4xz4w3c"; depends=[celestial data_table doParallel FITSio foreach magicaxis RColorBrewer Rcpp]; }; ProPublicaR = derive2 { name="ProPublicaR"; version="0.9.2"; sha256="17fghv7w4wm4q9nd6l4pl5ibk5i4zgdhlp5pvbzvymhvby0q06sw"; depends=[config dplyr httr lubridate stringr]; }; ProTrackR = derive2 { name="ProTrackR"; version="0.3.6"; sha256="1lhk3lrspiqcw2ckss52gdjk1f6ph8m7dlb05qxcx8mycq0xd3z9"; depends=[audio lattice signal tuneR XML]; }; ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; ProbitSpatial = derive2 { name="ProbitSpatial"; version="1.0"; sha256="0pq5bsjd00qc83c7x8vlpsxdksywlnfg7rlsvb6j21fz9wi3hpas"; depends=[Matrix numDeriv RANN Rcpp RcppEigen speedglm]; }; + ProcMod = derive2 { name="ProcMod"; version="1.0.3"; sha256="17x4c9vgf14l1x3hx3vyv3ygl8bb5qzq7fxg2cnl910drcdnv5sz"; depends=[expm foreach MASS Matrix mvtnorm permute Rdpack]; }; ProfessR = derive2 { name="ProfessR"; version="2.4-1"; sha256="1wsbx0dsygc1ipzhgs1pd0lhdb0qvp4ydqzwarn6zv27rzf4p3bd"; depends=[RPMG]; }; ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; }; ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; }; @@ -3134,8 +3190,8 @@ in with self; { PtProcess = derive2 { name="PtProcess"; version="3.3-13"; sha256="0vk1n7hk6v592fi5ld70db6m92zgpjx97axs5h8p53c29984qhwz"; depends=[]; }; PubBias = derive2 { name="PubBias"; version="1.0"; sha256="0dr5dhfx57knrs05pbx9ngg4k2937n8gjzsgd0jfqd8dfxhy051k"; depends=[R_utils rmeta]; }; PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.6"; sha256="1wfp1fpr4an7psrwidx38brvhvghmvfsgjy4gdx81p1bdsdn2kw2"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; - PublicationBias = derive2 { name="PublicationBias"; version="1.0.0"; sha256="1bl7msds7q8d08njgslv6ly631cmrp5yabqcayrpc852p2335q4l"; depends=[dplyr ggplot2 metafor MetaUtility Rdpack robumeta]; }; - Publish = derive2 { name="Publish"; version="2018.04.17"; sha256="0dbcql2mi2qsxzcgcqa58yqynfq1800fa06ikyay2dm6gdyf0apq"; depends=[data_table lava multcomp prodlim survival]; }; + PublicationBias = derive2 { name="PublicationBias"; version="1.1.0"; sha256="0prdwv3w9n0ppwizfqqvy5qj7krn3nm2zncz17zh7ijdw87xks4i"; depends=[dplyr ggplot2 metafor MetaUtility Rdpack robumeta]; }; + Publish = derive2 { name="Publish"; version="2019.11.02"; sha256="1bm6jjqkcbyjhf0n3rjyvgcig6xanf9y38nhnvg121ajnnnwl17m"; depends=[data_table lava multcomp prodlim survival]; }; PupilPre = derive2 { name="PupilPre"; version="0.6.0"; sha256="1ngrqrnlm1bpd5krjbxyhvga2mmwqd11dv8djzpgykl4mh41szh9"; depends=[dplyr ggplot2 mgcv rlang robustbase shiny signal tidyr VWPre zoo]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; Pursuit = derive2 { name="Pursuit"; version="1.0.0"; sha256="0wcg9zcln2mpqdyi4k4fcah6s1n0xd0jvc98vl4p1gyygy1x2vdr"; depends=[MASS]; }; @@ -3144,7 +3200,7 @@ in with self; { PythonInR = derive2 { name="PythonInR"; version="0.1-7"; sha256="1vrvf68sl2k25y3ppjwpi2j4952aq4k76r92qnq3fj92789ndyqv"; depends=[pack R6]; }; QAIG = derive2 { name="QAIG"; version="0.1.5"; sha256="1cchf5x7wzc3mc6xzvq14kmd9yxr9kq237s8af4xqaz1pv0b093j"; depends=[Formula stringr]; }; QBAsyDist = derive2 { name="QBAsyDist"; version="0.1.2"; sha256="1yql29npaq9yz02bv3hqf5m2mhscjms7qqf4vlaxm8s665rxcxad"; depends=[ald Deriv GoFKernel locpol nloptr quantreg scdensity zipfR]; }; - QCA = derive2 { name="QCA"; version="3.5"; sha256="0bbyza538a8bwhjxnbc38l7svjvp3dbr1ykabx79y8zwzqn8887g"; depends=[admisc fastdigest shiny venn]; }; + QCA = derive2 { name="QCA"; version="3.6"; sha256="07n2652l56w5dyz1ph4q7n9xkf0i145dya2w05b7lbilfjzqqxd1"; depends=[admisc shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -3165,14 +3221,14 @@ in with self; { QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; - QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.1"; sha256="14zdq8a352jvgzq1wp0jj2wx3hs3cr5dpryyvlhv2c0syldlw7xl"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp stringr]; }; - QTL_gCIMapping_GUI = derive2 { name="QTL.gCIMapping.GUI"; version="1.0"; sha256="05v93p3s9kncyzhiqgmd79h6b61xrr2k9vpgv9hjj0pkhsyanqc1"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp shiny stringr]; }; - QTLRel = derive2 { name="QTLRel"; version="1.1"; sha256="04v6cxqvnpziz46qgnkyn9hpg5pr61js83iy8fw9lp36bw51yknc"; depends=[gdata lattice]; }; + QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.2"; sha256="0a4ki5scmc771sr79maian7y790bw71l67d1qpc09qprmf9i36jl"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp stringr]; }; + QTL_gCIMapping_GUI = derive2 { name="QTL.gCIMapping.GUI"; version="2.0"; sha256="0jj6w8z99vpzgh76lv53zj8nv9p57y3502prr6xwkshj6rp8q1zv"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl QTL_gCIMapping Rcpp shiny stringr]; }; + QTLRel = derive2 { name="QTLRel"; version="1.4"; sha256="1ni8hf7xiadfg4p05wa83x7wg26d030mfjm45phghg0i1n7lfc4b"; depends=[gdata lattice]; }; QTOCen = derive2 { name="QTOCen"; version="0.1.1"; sha256="0wlbxk1rd56k02jf3pfzbx6xx5mmf6sb7gvds0067cvb7m42ghcr"; depends=[MatrixModels quantreg Rdpack rgenoud survival]; }; QUALYPSO = derive2 { name="QUALYPSO"; version="1.1"; sha256="0qpjv6krz66qfgyzndxihy5shmlsb0zs3wh49sxp00fh2bci5msw"; depends=[doParallel expm foreach MASS Rfast]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; QVM = derive2 { name="QVM"; version="0.1.1"; sha256="0dnr4h4084n505vrxfrx3czrkqdbna8s4fxpwr5czfilbfbxhpar"; depends=[gWidgets IMPACT ltm multilevel mvtnorm nlme pander psych]; }; - QZ = derive2 { name="QZ"; version="0.1-7"; sha256="1xkqp2z18fv4z0m5wc9cjd44zk3vk1wpl2lw09x8j10p65n717fm"; depends=[Matrix]; }; + QZ = derive2 { name="QZ"; version="0.1-9"; sha256="0i6cgywnfk8klsfr6x35fxzdshfhmps0b1fs5c7199r1rby0b3sc"; depends=[Matrix]; }; Qtools = derive2 { name="Qtools"; version="1.4.1"; sha256="0mv0pq4ryaijlz31r7w0qwqw4g8lr1pl9pf2319w2h4p86xp3g8m"; depends=[boot glmx MASS Matrix mice np numDeriv quantreg Rcpp RcppArmadillo]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; QuClu = derive2 { name="QuClu"; version="0.1.0"; sha256="0a2malh9vz5jcjgdx4d98k0c61vz3ip8ynqh5i85x8hzcby11qgj"; depends=[]; }; @@ -3186,17 +3242,16 @@ in with self; { QuantileNPCI = derive2 { name="QuantileNPCI"; version="0.9.0"; sha256="043lkg1pyaja7a4f9lmcwrvdjpfly2z378s15snwnxj8vb5pgr38"; depends=[]; }; QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; }; QuantumOps = derive2 { name="QuantumOps"; version="2.5.3"; sha256="0kcfs3rg50a82spzh5c215c8s2ff0wpdk29yn3n96m3hj4ir7j77"; depends=[]; }; - Quartet = derive2 { name="Quartet"; version="1.0.2"; sha256="17xj05ysi46w3zh1s10gml7cll4w6zdsn9x1ak8rjf7hwszidskg"; depends=[ape memoise Rcpp Rdpack Ternary TreeSearch]; }; QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-2"; sha256="1mr43vys9l1n859lzlcakjrvjllybgrwl0p8mc28h7m87yjkj670"; depends=[edgeR mgcv pracma]; }; - R_SamBada = derive2 { name="R.SamBada"; version="0.1.1"; sha256="0fji3hgx7ad9xhir5811wq1cr5mdixfixhgn77xbhaz3x5v9249g"; depends=[gdsfmt SNPRelate]; }; + R_SamBada = derive2 { name="R.SamBada"; version="0.1.2"; sha256="123a7s3rcmraq4chiqjkdp969jmr4c5br2xamdgvj6gzaf8zpmg0"; depends=[gdsfmt SNPRelate]; }; R_cache = derive2 { name="R.cache"; version="0.13.0"; sha256="1hf5cb7xvnca5zlh9245b5g62sgsaxwdhiv7x59yld37cydakm6k"; depends=[digest R_methodsS3 R_oo R_utils]; }; - R_devices = derive2 { name="R.devices"; version="2.16.0"; sha256="1f4jsa7b425rm1a0d00njx0pgvrvnhzf0xz2asq4yjhm4rhz0pbz"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; + R_devices = derive2 { name="R.devices"; version="2.16.1"; sha256="15zlnq3g27whq26fbcy5zfl5hiddm256h4rga4frblg6wqlbkvdd"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; R_filesets = derive2 { name="R.filesets"; version="2.13.0"; sha256="124rygq0bl9n4akxcm868nl30cyk3rz0iprb98zlpk62gci9f5fg"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; R_matlab = derive2 { name="R.matlab"; version="3.6.2"; sha256="1fw6ny8xb2j088k3s9lzd15av3j6xc2bvbccyrp7yjx2f3s3i8qv"; depends=[R_methodsS3 R_oo R_utils]; }; R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; - R_oo = derive2 { name="R.oo"; version="1.22.0"; sha256="0k6xwy93fpb2p7bs76lzk52br9rv5xnd9524xj8qyazv1132x1n0"; depends=[R_methodsS3]; }; - R_rsp = derive2 { name="R.rsp"; version="0.43.1"; sha256="0i01p8jxc4j4zl2v2ykvvpfnm5hv650zj1wi1dh8hq0c98xi2yfr"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; + R_oo = derive2 { name="R.oo"; version="1.23.0"; sha256="189fb7mmyzwg6nn8rza8iip7fbyws7i2vkmzy672x9mhvgilq4pm"; depends=[R_methodsS3]; }; + R_rsp = derive2 { name="R.rsp"; version="0.43.2"; sha256="128zqyvbq9hm9gy86jzhj609lkfw57vr24mdxgh46ncmx66ag4gj"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; R_temis = derive2 { name="R.temis"; version="0.1.2"; sha256="1bar4vyjnc9plwqm66vbgf6rakgj095zb7wsypmf3j3az694y62q"; depends=[crayon explor FactoMineR igraph NLP slam SnowballC stringi testthat tm tm_plugin_alceste tm_plugin_europresse tm_plugin_factiva tm_plugin_lexisnexis wordcloud]; }; R_utils = derive2 { name="R.utils"; version="2.9.0"; sha256="1w4zn2db15bggfnh64fbyi2z2sj47rcd4xn53b28dsnkamdcramj"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; @@ -3218,13 +3273,13 @@ in with self; { R3port = derive2 { name="R3port"; version="0.1.1"; sha256="0ww0sqjx0la03qx353h0y5wr5qpc5fir3gjy4fsxkw6jrsyx9vaz"; depends=[plyr reshape2 whisker]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; - R6 = derive2 { name="R6"; version="2.4.0"; sha256="1kmbw2k5vvzwh3wwmn66mszpfny0z6k8dca980qgbxgvfh0i3gkh"; depends=[]; }; + R6 = derive2 { name="R6"; version="2.4.1"; sha256="0gma5z41mx02ka9h96xdyf3p6i1rx0izczrzj26c4mbnh9jgvc16"; depends=[]; }; R62S3 = derive2 { name="R62S3"; version="1.3.1"; sha256="168iyz9zhnvbfgqnshbk9cvmzalmn1m9gxspdwr5xqa1x17hw6az"; depends=[checkmate]; }; R6DS = derive2 { name="R6DS"; version="1.2.0"; sha256="0ai1yqfhn634vm88waxdb6j24vwcna29gdqzdrwm0nxwf7l6g0m3"; depends=[R6]; }; RAC = derive2 { name="RAC"; version="1.5"; sha256="0q0kk9j3blrnhv0rfmryc35lli5j4kds2vmjdpg77znagb45609k"; depends=[maps maptools matrixStats ncdf4 plotrix raster rgdal rgeos rstudioapi sp]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; RADanalysis = derive2 { name="RADanalysis"; version="0.5.5"; sha256="1py07p24i1pky8wwyy8ajmkg6h2n7nbpxp1w6lrkiyl0p2kgjm20"; depends=[scales sfsmisc]; }; - RAHRS = derive2 { name="RAHRS"; version="1.0.2"; sha256="0s7vkmyc3yh62m2xbsvajgvi9xdw5x4irnp7rcllhqa7z9nj50c9"; depends=[pracma RSpincalc]; }; + RAINBOWR = derive2 { name="RAINBOWR"; version="0.1.14"; sha256="1jf1mk6bvi5ybsdrgxvlr0ksnkncn3cpqvz82d28yd9kml2a8q80"; depends=[cluster MASS Matrix optimx pbmcapply Rcpp RcppEigen rgl rrBLUP]; }; RAM = derive2 { name="RAM"; version="1.2.1.7"; sha256="0aalswivpjs1glwf4yh3b79lch3n32fyj5xda55h3v7gzs7p0d7f"; depends=[ade4 ape data_table FD ggmap ggplot2 gplots gridExtra labdsv lattice MASS permute phangorn phytools plyr RColorBrewer reshape reshape2 RgoogleMaps scales vegan VennDiagram]; }; RAMClustR = derive2 { name="RAMClustR"; version="1.0.9"; sha256="0fw8gps8lyjffrqklfk8ps4fn8ail2m6b54q3805pcw27mb9jxml"; depends=[BiocManager dynamicTreeCut e1071 fastcluster ff gplots httr InterpretMSSpectrum jsonlite pcaMethods preprocessCore RCurl stringi stringr webchem xml2]; }; RAMP = derive2 { name="RAMP"; version="2.0.1"; sha256="1n8h58j6v1xs6adrr4w4ha7pn1q2fh14dyg7zgpp2smv0j2b33dr"; depends=[]; }; @@ -3242,10 +3297,11 @@ in with self; { RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="3.2"; sha256="0apw4l7z0jwa7bs7scfysv2amk2rxi7knw9x9j7vqlrgj0i059gm"; depends=[unix]; }; RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; }; + RAthena = derive2 { name="RAthena"; version="1.4.1"; sha256="042cbcc0s7sbp8ij7mzrplzs8fs4ac3xw6c064mr6rmig58a2d4r"; depends=[data_table DBI reticulate]; }; RBF = derive2 { name="RBF"; version="1.0.0"; sha256="0q2k2ar9cd62cykg99r86cflx2nknlg32fhhsjay4xs191fapw8j"; depends=[]; }; RBMRB = derive2 { name="RBMRB"; version="2.1.2"; sha256="1m6n2kfg83mlfy22k75hy5zjf547v0rdwk9w6l04yfyrr6himbr8"; depends=[data_table ggplot2 httr plotly rjson]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; - RBesT = derive2 { name="RBesT"; version="1.5-3"; sha256="18a4f694aq0cn3psf6vqi74yp962hs2nd6bk1fg55s0x11p31spw"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; + RBesT = derive2 { name="RBesT"; version="1.5-4"; sha256="1050lhwa7ph5xlzchx0lz7fx6bnfl5zhrim9cy2lh4fxw0vdm7xp"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; RBitmoji = derive2 { name="RBitmoji"; version="0.0.2"; sha256="1v9qj3vmqsvnccsy735nbflmd81183h2flm0f1ckd4kl08r2fr3f"; depends=[getPass httr jsonlite png RCurl]; }; RBtest = derive2 { name="RBtest"; version="1.0"; sha256="1pyygx39r5dd81xqzqmxhkwapaq7pc5q1bp0gwx28cp4wi07mm6i"; depends=[mice nnet psych]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; @@ -3253,7 +3309,7 @@ in with self; { RCALI = derive2 { name="RCALI"; version="0.3.1"; sha256="0hc7h55qi8bpmp9rfh1wgxqs28kbs4yqxch2jlgl42vk5383askq"; depends=[splancs]; }; RCEIM = derive2 { name="RCEIM"; version="0.3"; sha256="1kil5r88b6lf8vxmswz0wn0hhjxjm8jmlcl5kxjwl6fwjyy2z120"; depends=[]; }; RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; }; - RCPmod = derive2 { name="RCPmod"; version="2.186"; sha256="0qxk6236xq391czyr043wn8rfml70gkc0xa6vz24s768gxmdk46l"; depends=[fishMod glmnet gtools MASS]; }; + RCPmod = derive2 { name="RCPmod"; version="2.190"; sha256="1r24g8fcizyqzgp0da90sxpwalgcsgz2b168j2smpylxraiqb037"; depends=[fishMod glmnet gtools MASS]; }; RCRnorm = derive2 { name="RCRnorm"; version="0.0.2"; sha256="1mz1jb7mc9c47hbk9flnddny4zir6r2k5qis30iynwqny521l6ln"; depends=[truncnorm]; }; RCSF = derive2 { name="RCSF"; version="1.0.1"; sha256="0mqrv0bk17mm8ywicmns90n8g9h161hw1l77ji7hvadiv0y7vznq"; depends=[Rcpp]; }; RCarb = derive2 { name="RCarb"; version="0.1.3"; sha256="0z5hpnlzlvbh14f1wjy9rw4ljdsiqdzmqnmh3yqz7mbw5qxx4gzz"; depends=[interp matrixStats]; }; @@ -3263,13 +3319,13 @@ in with self; { RClickhouse = derive2 { name="RClickhouse"; version="0.4.0"; sha256="0lb0sgs2f78y2z5ip2wqml88vykrwkdhn3i36y9hyrm34ackis6h"; depends=[DBI dbplyr dplyr Rcpp yaml]; }; RClimMAWGEN = derive2 { name="RClimMAWGEN"; version="1.1"; sha256="0icy560llfd10mxlq0xmc6lbg6a030za9sygw1rpz8sk5j0lvb84"; depends=[climdex_pcic RMAWGEN]; }; RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; - RColetum = derive2 { name="RColetum"; version="0.2.0"; sha256="0d0938vvlffqkbl7ild745j1x99dx04vsi18zm8m20waiqmv35q9"; depends=[dplyr httr jsonlite]; }; + RColetum = derive2 { name="RColetum"; version="0.2.1"; sha256="1hgk9p234m3w49sw2j2rg8c14z3gz1mabvb69b1bxrg7f1mz9slg"; depends=[dplyr httr jsonlite]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; RCrypto = derive2 { name="RCrypto"; version="0.1.0"; sha256="1lw7hq5ks36fixk0g3gcy4nw21ygwc14jq840hnhyds4glywfpvm"; depends=[dplyr httr jsonlite]; }; RCurl = derive2 { name="RCurl"; version="1.95-4.12"; sha256="1x2z708y89fjphhzs76lycs5rmh5i411wallmhyq4h6zmzppjdrr"; depends=[bitops]; }; - RCzechia = derive2 { name="RCzechia"; version="1.4.2"; sha256="0vxmng4mlc8wdqzk9ck920z3bnh53wdax19kc12k06amclyv8lvm"; depends=[curl httr jsonlite lwgeom magrittr sf]; }; + RCzechia = derive2 { name="RCzechia"; version="1.4.3"; sha256="1fywiiqrh6mahhxwx7g05dl1hivwipzylv1h1bpcrs6x75a8nr10"; depends=[curl httr jsonlite lwgeom magrittr sf]; }; RDFTensor = derive2 { name="RDFTensor"; version="1.1"; sha256="1xbar13snwyls6rva91bs0632zplfc2qcqlwf7h07r8798m3234s"; depends=[Matrix pracma]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="1.0"; sha256="13ly1p42njbcygwvkyii8sjqbsywjy5w5g1kd7m8kswi5dsk3qqv"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; @@ -3280,13 +3336,13 @@ in with self; { RDieHarder = derive2 { name="RDieHarder"; version="0.2.0"; sha256="0yy17vn7m0042ykrlvlvhd2fbz0hw60nra5zmnc822r2f13h2acg"; depends=[]; }; RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; - REAT = derive2 { name="REAT"; version="3.0.1"; sha256="1lp9z2pylf4klfw8j1wldx281dcvfdbk4jrg98xda34akqzb2hy1"; depends=[]; }; + REAT = derive2 { name="REAT"; version="3.0.2"; sha256="0x5cal502n8abynx1jk2ccmmggvd41rvd2gc6rxkbyvcp4794l82"; depends=[]; }; REBayes = derive2 { name="REBayes"; version="1.8"; sha256="1mvi163djhnq3c711mx4a6mh1vmlcj80562czx12z2gmx13810nh"; depends=[Matrix reliaR]; }; RECA = derive2 { name="RECA"; version="1.7"; sha256="1xikj20flqajpkw4wyynmqd1pafbylzwfrmc8bz9pqgggjjhrqql"; depends=[]; }; REDCapR = derive2 { name="REDCapR"; version="0.10.2"; sha256="0rdni325k0641yfv4g9l1szg1bl48767n6r1xkh8q3fnvqaqwnrg"; depends=[dplyr httr magrittr readr rlang tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; - REPLesentR = derive2 { name="REPLesentR"; version="0.3.0"; sha256="1cfbf6r9p09ccia2f3pc2fz178zvrm3rwa6affyqr3gygpd1smb4"; depends=[dat knitr modules]; }; + REPLesentR = derive2 { name="REPLesentR"; version="0.4.1"; sha256="0rwd7hxk12f4f1kpj6sl424yhbxi3h9dz6km5awijazmgv95carz"; depends=[dat knitr modules]; }; REPPlab = derive2 { name="REPPlab"; version="0.9.4"; sha256="1pf8zrjdzziyq2lw31p1ij7cn4j7pf659ygxv8wpfnmcmpaqbc45"; depends=[lattice LDRTools rJava]; }; REPTILE = derive2 { name="REPTILE"; version="1.0"; sha256="11swy4jrmmb0xjjxm1wyxd628fxxcqnialvijdrjwjpdbvraz4gq"; depends=[doParallel flux foreach optparse randomForest]; }; REQS = derive2 { name="REQS"; version="0.8-12"; sha256="049glqhc8h8gf425kmj92jv70917dsigpm37diby0c6hb4jrg8ka"; depends=[gtools]; }; @@ -3312,7 +3368,7 @@ in with self; { RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; }; RGCxGC = derive2 { name="RGCxGC"; version="1.0.0"; sha256="1qxacxqkxcclkj8f1y7b6c5fspp5qk5847fqb1ib05njh6wxsmvj"; depends=[colorRamps prettydoc ptw Rdpack RNetCDF]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; - RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; + RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2.5"; sha256="1jqyp91x569la1vc6wl6v7jq6iq1cx2qkds9yiqm85bgzydp4lxw"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; RGF = derive2 { name="RGF"; version="1.0.6"; sha256="11pnbiyp39r95c8ajj2jyxz4h1zf6fi8ki78rmn4vp7xm2bl3zff"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGISTools = derive2 { name="RGISTools"; version="0.9.7"; sha256="1bij314qv9lnbb9rjxb37fhp97nz8sqlbqajdbixxpvsnp4mx2k0"; depends=[curl fields gdalUtils httr magick raster Rdpack rjson rvest sp urltools XML xml2]; }; @@ -3329,7 +3385,7 @@ in with self; { RH2 = derive2 { name="RH2"; version="0.2.4"; sha256="14590l3a2znd56nrq1zfbfv7fgii4672qy1xfwiynrh3mjad217k"; depends=[chron rJava RJDBC]; }; RHMS = derive2 { name="RHMS"; version="1.6"; sha256="067vxx0s338ziyyshq386br7b8ksycqinn16qnvb53ldshyw0dcm"; depends=[GGally ggplot2 Hmisc network pso]; }; RHPCBenchmark = derive2 { name="RHPCBenchmark"; version="0.1.0"; sha256="1f94d8z15ybqgc2pccsi1m6563xf26ygri6f4pwxkqjmxkxnk34y"; depends=[cluster Matrix mvtnorm]; }; - RHRV = derive2 { name="RHRV"; version="4.2.4"; sha256="0jf2vms2yr2d52x8g5fz6v2pd2gzgc5z96fnbf63s55fni72rbxm"; depends=[lomb nonlinearTseries tkrplot waveslim]; }; + RHRV = derive2 { name="RHRV"; version="4.2.5"; sha256="1xjmcb9w285x3q930hm91ln4b8zhd9s741h5iwd71pj0cdf184gh"; depends=[lomb nonlinearTseries tkrplot waveslim]; }; RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; }; RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; @@ -3337,7 +3393,7 @@ in with self; { RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; RISCA = derive2 { name="RISCA"; version="0.8"; sha256="0z6wq5bmfx6zrj7cnd7y0x8h7qkz4njcvb8jb1mil92zx2z47d43"; depends=[date MASS mvtnorm nlme relsurv riskRegression statmod survival]; }; RISmed = derive2 { name="RISmed"; version="2.1.7"; sha256="08dmkkxsmwp9b4h2g1bbx03cijn793fsnzkmbima8x9d42vxnm1l"; depends=[]; }; - RIdeogram = derive2 { name="RIdeogram"; version="0.1.1"; sha256="17pn5hi661j2pzr2c2m2h9r9x6bd5dl9q7xjdz8s0jf9fka0r8jr"; depends=[ggplot2 grImport2 rsvg scales]; }; + RIdeogram = derive2 { name="RIdeogram"; version="0.2.1"; sha256="1npph7j43fyna3nziy1iqfrl0wh8p0m32r8q3s1cd5ffbr1b7jiw"; depends=[ggplot2 grImport2 rsvg scales tidyr]; }; RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; RImpact = derive2 { name="RImpact"; version="1.0"; sha256="010bdq6r2fv4rs78kl1ixnw1di39v90ckh8bblzi0wv4adlbaza4"; depends=[]; }; @@ -3352,7 +3408,7 @@ in with self; { RJaCGH = derive2 { name="RJaCGH"; version="2.0.4"; sha256="1a8nd0w73dvxpamzi2addwr6q3rxhnnpa1girnlwbd1j1dll0bz6"; depends=[]; }; RJafroc = derive2 { name="RJafroc"; version="1.2.0"; sha256="19d6k8294g9w3i2d8mivd4p1sczhq9rc26mhz7ywz0x5fxqcpx77"; depends=[bbmle binom dplyr ggplot2 mvtnorm numDeriv openxlsx Rcpp stringr]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; - RKEAjars = derive2 { name="RKEAjars"; version="5.0-3"; sha256="0sm7dkdprmqh319jc43ra7qbk4qq0b2kdj9zs9mjcjz58gcrkl7s"; depends=[rJava]; }; + RKEAjars = derive2 { name="RKEAjars"; version="5.0-4"; sha256="1j4643xc8k3zy4rv0h8dd154jafihnjr43wzz3d93j11g2w9xhq3"; depends=[rJava]; }; RKEEL = derive2 { name="RKEEL"; version="1.3.1"; sha256="0k13j460jalmjdicrm7rqxb1b25cx1h4c276xbiybmhrmzmjlv5y"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; RKEELdata = derive2 { name="RKEELdata"; version="1.0.5"; sha256="1swzqw6j006ya48ahg6n1g8faxhqiv9v5q1zrnihpzj6868lf7y3"; depends=[]; }; RKEELjars = derive2 { name="RKEELjars"; version="1.0.19"; sha256="1a879b0xq5jk7r2pf4n41nm0c4himl4yqw083xh2ha4qdhab5kq0"; depends=[downloader]; }; @@ -3369,19 +3425,18 @@ in with self; { RM_weights = derive2 { name="RM.weights"; version="2.0"; sha256="1by1z7gwwx0jjhhvsjkr7f6m7n0x43bj080ah5275cja7xqr5nm6"; depends=[Hmisc psychotools]; }; RM2 = derive2 { name="RM2"; version="0.0"; sha256="1v57nhwg8jrpv4zi22fhrphw0p0haynq13pg9k992sb0c72dx70a"; depends=[msm]; }; RM2006 = derive2 { name="RM2006"; version="0.1.0"; sha256="1qjvdh89jql1fl6ia76g766y1igkshlv0slqmpi0y3bn40413snb"; depends=[]; }; - RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.3"; sha256="0spc0vszbxfpfp3kqdj0gnb90nvn50qwalq3mw8151b8h1swmf3l"; depends=[chron date vars]; }; + RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.6"; sha256="18r9lgfc59x2qrlmybfrkrnb1f2a8xp6dyy2inzw2zn19ps9d3k2"; depends=[chron date vars]; }; RMKL = derive2 { name="RMKL"; version="1.0"; sha256="118xdnzljskyf4ibdrlhy07r1y1x5r2b0mqagqaabxs7s9503whc"; depends=[caret e1071 kernlab Rcpp RcppArmadillo]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; RMOA = derive2 { name="RMOA"; version="1.0.1"; sha256="1ppbwqdfxzk1ayms0rqw22l0r8vkk8av39spwpq8avgl6vssw8c4"; depends=[rJava RMOAjars]; }; RMOAjars = derive2 { name="RMOAjars"; version="1.0.1"; sha256="0qzpwsbndn8fw9560z9h9w9ff9bx6xj7mr50683q1n3dpn5z637i"; depends=[rJava]; }; - RMRAINGEN = derive2 { name="RMRAINGEN"; version="1.0"; sha256="175kd803a44yblq2jw5mrn2qv4piiy249577lf684bmmajf4ird4"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN]; }; RMTL = derive2 { name="RMTL"; version="0.9"; sha256="08da67wvzmibziqhnlzh43sydaihk4rsq2k5hs6ih3jkkidrhlgv"; depends=[corpcor doParallel foreach MASS psych]; }; RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; RMaCzek = derive2 { name="RMaCzek"; version="1.0.0"; sha256="0pjpsaqm9bfggbd1wagfazgqn23k5ba43a4vv1lmqq44l4fsdgb0"; depends=[GA seriation]; }; RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; }; - RMariaDB = derive2 { name="RMariaDB"; version="1.0.6"; sha256="19pjxgz9h3bb89ra6ha6mbnzyz1sagmm82qd57y0rbrsvwn0pk2i"; depends=[BH bit64 DBI hms plogr Rcpp]; }; - RMark = derive2 { name="RMark"; version="2.2.6"; sha256="0ihidwk7fbjjh6qmrd3rjmk2yjrjdf7a53sdnh6ynkjkzlqb2gr7"; depends=[coda matrixcalc msm]; }; + RMariaDB = derive2 { name="RMariaDB"; version="1.0.7"; sha256="17l9i2g6rwfkihyvd1ycx7a2m4cfgpwyamsqwd753rc874zszq6m"; depends=[BH bit64 DBI hms plogr Rcpp]; }; + RMark = derive2 { name="RMark"; version="2.2.7"; sha256="0qxa383cagzqrnfc3izybb4lrg8z1r3nw1j5b7h4wkjwy0k3kczb"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; RMixpanel = derive2 { name="RMixpanel"; version="0.7-1"; sha256="1xwmmfvky49n1l0w3kwcyaf2h4rhzz4k5icjwvpc90fqk8sxib6a"; depends=[base64enc jsonlite RCurl uuid]; }; RMixtComp = derive2 { name="RMixtComp"; version="4.0.2"; sha256="005fmns31m51p9480bxiahllxpg530j2jxkg2vadw761h61s90al"; depends=[ggplot2 plotly RMixtCompIO RMixtCompUtilities]; }; @@ -3399,12 +3454,12 @@ in with self; { RNOmni = derive2 { name="RNOmni"; version="0.7.1"; sha256="0lzd820x9yw90ddzmxvd89pkqc3nrljlc6kz4cab50zj3s755ack"; depends=[abind foreach plyr Rcpp RcppEigen]; }; RNRCS = derive2 { name="RNRCS"; version="0.2.5"; sha256="19q78l8mh4701vqvr36vqc87n39s5ivzhiy5lvnxbd4dgibk1jr2"; depends=[ggplot2 magrittr rvest xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; - RNeXML = derive2 { name="RNeXML"; version="2.3.0"; sha256="0wyvkv1ifagir4acjivdnns6vwnzdy3a5h8pnvy4qzzly90y2lla"; depends=[ape dplyr httr lazyeval plyr reshape2 stringi stringr tidyr uuid XML xml2]; }; + RNeXML = derive2 { name="RNeXML"; version="2.4.0"; sha256="164krdabq3xqw8djmbpwj20vx074x9dgcdy5l1hr06cmz2bahqp1"; depends=[ape dplyr httr lazyeval plyr reshape2 stringi stringr tidyr uuid XML xml2]; }; RNentropy = derive2 { name="RNentropy"; version="1.2.2"; sha256="0chvmrvpyyghilwb63y6pd1zp94i5qhpv5w19x9nw0ypk86pp2dj"; depends=[]; }; - RNetCDF = derive2 { name="RNetCDF"; version="1.9-1"; sha256="0idfskxb1k8x0zzl6b0kgskdxn7zr49gw9xcj870ah9zp93iwnkx"; depends=[]; }; + RNetCDF = derive2 { name="RNetCDF"; version="2.1-1"; sha256="0i670giq741d78ps6y98xbnqdybkv2svmdd6jbvcbpgdry6pfw89"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; - RNewsflow = derive2 { name="RNewsflow"; version="1.1.1"; sha256="1vigzkyh8p6x4hzrmcsbvv2jk3pz39kix6b12xzzllkvi1kq784q"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales slam stringi tm wordcloud]; }; - RNifti = derive2 { name="RNifti"; version="0.11.1"; sha256="0jcgdg5k2swmi57aqj347kfi1fc4nvag7pxdfz61kc0vqqamm0wg"; depends=[Rcpp]; }; + RNewsflow = derive2 { name="RNewsflow"; version="1.2.1"; sha256="07469svqqjskrf04cm0ga5h94yb5h845dhz5gp740f16ymm0gkci"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; + RNifti = derive2 { name="RNifti"; version="1.0.1"; sha256="0hfid40pgfi1ykqka8y3v0m7h0iyd6fbvycvqlad3ibmbg621f0w"; depends=[Rcpp]; }; RNiftyReg = derive2 { name="RNiftyReg"; version="2.6.7"; sha256="1qx6igv0kdja2c139gbs42cwfjwj7ifcxxlswydvja03iz3k53wz"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROC632 = derive2 { name="ROC632"; version="0.6"; sha256="0vgv4rclvb79mfj1phs2hmxhwchpc5rj43hvsj6bp7wv8cahfg5g"; depends=[penalized survival survivalROC]; }; @@ -3453,8 +3508,10 @@ in with self; { ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; RPANDA = derive2 { name="RPANDA"; version="1.6"; sha256="02pf0j6nrv12jlpyn5fb81hvwllsxx9g88p5cdcvwdldwmjhralb"; depends=[ape cluster coda corpcor deSolve fields fpc geiger glassoFast igraph Matrix mvMORPH mvtnorm phytools picante pracma pspline pvclust Rmpfr TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; + RPEClust = derive2 { name="RPEClust"; version="0.1.0"; sha256="1ysw45335lrxmj3j17xyvgz76p00v80f2m7wxfndh91wklqxzm8r"; depends=[clue clusteval mclust]; }; RPEGLMEN = derive2 { name="RPEGLMEN"; version="1.0"; sha256="0c5qgfwk2nnkrxhy7y5k197wvi0n1dgnfw5xyccw4a3bw6wa7yd0"; depends=[PerformanceAnalytics Rcpp RcppEigen RPEIF]; }; - RPEIF = derive2 { name="RPEIF"; version="1.0"; sha256="13psw9sjpqq55vqf09ja4xkhpb6mp9zpzbka40v2gzxr503n69rq"; depends=[ggplot2 PerformanceAnalytics Rcpp RcppArmadillo RobStatTM xts zoo]; }; + RPEIF = derive2 { name="RPEIF"; version="1.0.2"; sha256="1jis52h4x7dxjkwb5dlfswjjk7wz418ra50kxl6aa8dngf79jbma"; depends=[PerformanceAnalytics Rcpp RobStatTM xts zoo]; }; + RPESE = derive2 { name="RPESE"; version="1.0"; sha256="0cbq3ifwv69ngxh7zvrqjgwqyzd50152k1i95iin6czsn3mz4pjf"; depends=[boot PerformanceAnalytics robustbase RPEGLMEN RPEIF sandwich xts zoo]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.1"; sha256="0m5ml8ywxrf66mjz6m3xp1lajd7wdq9g7xsaln8n7ykq7h5615fc"; depends=[]; }; RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; }; RPMG = derive2 { name="RPMG"; version="2.2-3"; sha256="1di2bcf58z6gc3xknzx35znsjsy1714swvxkdhlq1ljidbdbmmbl"; depends=[]; }; @@ -3464,7 +3521,7 @@ in with self; { RPS = derive2 { name="RPS"; version="1.0.1"; sha256="16n6wknw2m56kwi6rswgxjwjqblhaz5gyw94f96a7l6navqnvlp4"; depends=[ape geomorph Gmedian igraph MASS matlab]; }; RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; RPostgres = derive2 { name="RPostgres"; version="1.1.1"; sha256="1s25lkb69dkc5zk5ikbqa325jw5kfavghsq7s26mrcng4va9dz6i"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; - RPresto = derive2 { name="RPresto"; version="1.3.3"; sha256="0nsqva6k9b9kdv7y7xjbanr3r1bcn28xln2xcv753xqawmsmiv1r"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; + RPresto = derive2 { name="RPresto"; version="1.3.4"; sha256="17hwq76vzr27prwisfxahs1ix9grldknaywnq3v2a3s2x79v8vbv"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; RProbSup = derive2 { name="RProbSup"; version="2.1"; sha256="0lmv4x235xiykc8jfnp15l4yypm99yz6spsnaxacp49y2aw23jpy"; depends=[]; }; RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.14"; sha256="1jn288796g61sfffnrfm0nm6igyv0yixlb09yhw8fqih7qg14lnx"; depends=[Rcpp RCurl]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; @@ -3478,7 +3535,7 @@ in with self; { RRF = derive2 { name="RRF"; version="1.9.1"; sha256="135adnf7cfs8gddmmmgmzarjzg0qfrd7l67367yhy2b1k0s5ng1w"; depends=[]; }; RRI = derive2 { name="RRI"; version="1.0"; sha256="163imfrhx435fxw39pi4vj1fmk6g6cldlsgmwcpgfqmp45ycclpj"; depends=[Rcpp RcppArmadillo]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; - RRPP = derive2 { name="RRPP"; version="0.4.2"; sha256="1x1vrnqsd8ab70pj63vlpiwf8c76xriggb87j7p6c7yj96syp911"; depends=[]; }; + RRPP = derive2 { name="RRPP"; version="0.4.3"; sha256="0h19ysl407fssxhbf364738n1vzkfgr52wv9lz71pss4j8sv3ss6"; depends=[]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; @@ -3489,7 +3546,7 @@ in with self; { RSAGA = derive2 { name="RSAGA"; version="1.3.0"; sha256="1y1zhy2bxkfsv8vmnxjdg9i5rqkvs32kw8h5z1mclv953srgkpn9"; depends=[gstat magrittr plyr rgdal shapefiles stringr]; }; RSAlgaeR = derive2 { name="RSAlgaeR"; version="1.0.0"; sha256="1hp0v2vkj9ixiv541d53kyl0ph3jsdc5w98r81gv5ck5ixrp6bxp"; depends=[cvTools ggplot2 hydroGOF lubridate mblm plyr]; }; RSCAT = derive2 { name="RSCAT"; version="1.0.0"; sha256="1axc2vks0prd2fz1aaa1bjlfn1plfzdr041wh27v97541vsjdw47"; depends=[ggplot2 gridExtra Metrics rJava shiny shinycssloaders shinyjs]; }; - RSDA = derive2 { name="RSDA"; version="2.0.8"; sha256="1lnqncjmqci6lbdm2pph6ankwb9vhwi7mvgjip2qvc2ydgyv6gy9"; depends=[abind dplyr FactoMineR ggplot2 ggpolypath glmnet lazyeval nloptr pander princurve purrr randomcoloR reshape RJSONIO rlang scales scatterplot3d sqldf stringr tibble tidyr tidyselect XML xtable]; }; + RSDA = derive2 { name="RSDA"; version="3.0"; sha256="1biw9dwzi5sbqnb1jpsggrqrgvfvvna3l5y75hh1iplzixn25p4p"; depends=[dplyr FactoMineR forcats ggplot2 ggpolypath glmnet magrittr nloptr princurve purrr randomcoloR reshape RJSONIO rlang scales sqldf stringr tibble tidyselect vctrs XML]; }; RSE = derive2 { name="RSE"; version="1.3"; sha256="1dvmj1zwkbp1dj9r8kcvbd8rpknfwfdqaqc5gfl82bh823w72099"; depends=[]; }; RSEIS = derive2 { name="RSEIS"; version="3.9-0"; sha256="16jmakdq6rkyw3cm1ilnaw3ycsg12544ml9gla7y8mgpbglxsn6i"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.2.2"; sha256="16s9iahbcdqykavm5cq8n76hlpfqlljl17xwh0vrz5ac7z4z3rdz"; depends=[MCMCpack]; }; @@ -3505,15 +3562,16 @@ in with self; { RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; RSarules = derive2 { name="RSarules"; version="1.0"; sha256="0lrql4q45hyhqbix86ixl12mknnjbz3137gx2zkvqpz91bsk145j"; depends=[arules Matrix]; }; RSauceLabs = derive2 { name="RSauceLabs"; version="0.1.6"; sha256="1p7hw6vnlg6w5ggmfpc3q3s6n1fikjkjnxzz97jifiy0zwn5dp9i"; depends=[data_table httr jsonlite whisker xml2]; }; + RScelestial = derive2 { name="RScelestial"; version="1.0.0"; sha256="1amvzp4a69cpm13affvpza8zs1n78a3y93bwpv0fzi2b60im4y9x"; depends=[Rcpp]; }; RSclient = derive2 { name="RSclient"; version="0.7-3"; sha256="07mbw6mcin9ivsg313ycw2pi901x9vjpmi6q7sms1hml4yq50k6h"; depends=[]; }; RSeed = derive2 { name="RSeed"; version="0.1.60"; sha256="0rvb6w4z5c2wcdgx5w6vv7c8il8d0096pgv3fyvw21ag25z605jc"; depends=[graph RBGL sybil]; }; RSelenium = derive2 { name="RSelenium"; version="1.7.5"; sha256="1ih22z3p1p673dhbjsfmli94bzqp5xk3psslf4c0r9dvmw9h6s5c"; depends=[binman caTools httr openssl wdman XML]; }; RSentiment = derive2 { name="RSentiment"; version="2.2.2"; sha256="15d1llzxg1apkwykpb7pic2d5lfj9i9a55hab067wrz2yq5jsyfa"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.2-12"; sha256="1bc0vdqqzkf3q3b6rzqiwd29lcq8vbvlj2qkxbx6v8wjphycz6rw"; depends=[lattice MASS Matrix]; }; - RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.15"; sha256="13mrqf458m43g435g4pbg49pid63f4ap1r8jzl84mvj1b36hy4q6"; depends=[base64enc digest httr jsonlite plyr stringr]; }; + RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.16"; sha256="1plcmxj6sahdy3vvcmxry8cbq1j23bqzhnhn593bkwmzczka24cy"; depends=[base64enc digest httr jsonlite plyr stringr]; }; RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.3"; sha256="02zswadv65a5p5q9rr12f819mh7jjqk8xj1kc1c0wqvr8dgz7fx9"; depends=[RCurl]; }; - RSocrata = derive2 { name="RSocrata"; version="1.7.9-5"; sha256="03j20swsw9s79v5ia4lwf43vyxfkbbjj795pb5vl6p2kmk3l38m7"; depends=[httr jsonlite mime plyr]; }; - RSpectra = derive2 { name="RSpectra"; version="0.15-0"; sha256="1ab975scdqaxdna9sayjl6l14hz991y0pc8c8ah48w000616km8s"; depends=[Matrix Rcpp RcppEigen]; }; + RSocrata = derive2 { name="RSocrata"; version="1.7.10-6"; sha256="1pzdpy1mifr6hhhj7pq8l5jl8dsn6270ibm6pnmc66psh0xr2zsa"; depends=[httr jsonlite mime plyr]; }; + RSpectra = derive2 { name="RSpectra"; version="0.16-0"; sha256="1ab45as2ysjrvkhvmx7y3nbhd0y1w4j9k2a789lcd973zz4wzwda"; depends=[Matrix Rcpp RcppEigen]; }; RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; }; RStata = derive2 { name="RStata"; version="1.1.1"; sha256="1wx6cz4567xkfplybmbwmw25snhlaxn48yi620cv6p5xqv458yp7"; depends=[foreign]; }; RStoolbox = derive2 { name="RStoolbox"; version="0.2.6"; sha256="1pq0vxq53x8f0358qfq1rakb59cdfi4micp7hjb9fbz95q9am8mj"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgdal rgeos sp XML]; }; @@ -3528,7 +3586,7 @@ in with self; { RTDE = derive2 { name="RTDE"; version="0.2-0"; sha256="1dj7dsj4256z9m70y2fpcgprxpqbgqxz0dqwn0jl80sj2325f66s"; depends=[]; }; RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; }; RTaxometrics = derive2 { name="RTaxometrics"; version="2.3"; sha256="02446y86g21i37ycavg0xc1ggxk0k93d38n71fis9fav06lywxx3"; depends=[]; }; - RTest = derive2 { name="RTest"; version="1.2.4"; sha256="1h6qvr87307yymzd7ily6xbp9x8jx8hm0b89pqfz9k4h1l4xvdbr"; depends=[base64 glue jsonlite magick magrittr rlang stringr testthat XML]; }; + RTest = derive2 { name="RTest"; version="1.2.5"; sha256="1pj6gjlrykkjxffq076vq2kwxd3vww85rqswqmddx2ks7jsn3m2x"; depends=[base64 glue jsonlite magick magrittr rlang stringr testthat XML]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; RTransProb = derive2 { name="RTransProb"; version="0.3.3"; sha256="1fl8ag7aizj7k7j5ypx632qa98jp3wp8z3mp5z490n1277ajzrkb"; depends=[caret chron e1071 expm MASS Matrix matrixStats neuralnet nnet pracma Rcpp RcppArmadillo zoo]; }; RTransferEntropy = derive2 { name="RTransferEntropy"; version="0.2.12"; sha256="066wyama0gk81l6kc0n31cmf007i1975i7hzvf46qbldvhsc52mc"; depends=[future future_apply Rcpp]; }; @@ -3537,6 +3595,7 @@ in with self; { RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-73"; sha256="1zjvvqdcczpnxkm6n3zxv8ysgn5x44k7w2b12yx01h2x71bwg1hg"; depends=[ade4 boot car cramer FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; RVenn = derive2 { name="RVenn"; version="1.1.0"; sha256="016m00xv59lkwm2is32v5nr4lw5a1ymdnz34r3ffflcv9bfrc6n4"; depends=[ggforce ggplot2 magrittr pheatmap purrr rlang vegan]; }; + RVerbalExpressions = derive2 { name="RVerbalExpressions"; version="0.1.0"; sha256="1p9wmpgqwnz95sr8km8y6kqax8fcz6sqg54wfdx44kiqkf1ybdsp"; depends=[magrittr]; }; RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; RViennaCL = derive2 { name="RViennaCL"; version="1.7.1.8"; sha256="0lh23g8zyd50p6hnl4dfmzrsg48y74g2h7dism9j2n1pfd9p9k5d"; depends=[]; }; RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.13"; sha256="106lr6iz28gscczs18759zaki7dnxy1873swiakimfqmwpw9dp9n"; depends=[Rcpp]; }; @@ -3544,8 +3603,8 @@ in with self; { RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; }; RWDataPlyr = derive2 { name="RWDataPlyr"; version="0.6.2"; sha256="1928hyfmy21s586nafd5qajbypqslc96zfmxbi42rcmvzim16v3k"; depends=[data_table dplyr feather Rcpp tibble tidyr xts zoo]; }; RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; }; - RWeka = derive2 { name="RWeka"; version="0.4-40"; sha256="19xhrbr0105yax1534z1h08p1nxdmsg2dfch8kpqj37n9zmnx6zg"; depends=[rJava RWekajars]; }; - RWekajars = derive2 { name="RWekajars"; version="3.9.3-1"; sha256="16syvpc9qfn19sjdp3jikmzccj198ybr8dar7fajfaqsfms2kgfw"; depends=[rJava]; }; + RWeka = derive2 { name="RWeka"; version="0.4-41"; sha256="1grsq6wkvci2hs0vcr9zwrf7iyfrlxwag43l0k5hf8icazp8ffmf"; depends=[rJava RWekajars]; }; + RWekajars = derive2 { name="RWekajars"; version="3.9.3-2"; sha256="06nsylv65z9hxym1b6qnwllh306bq5phsgr0qn4nyr5im8cv1rhn"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; RWsearch = derive2 { name="RWsearch"; version="4.6.2"; sha256="1sak4ihzvba83q1zvn65983qz50cb1nbz1mwiasr3bzz27hhdp4a"; depends=[brew latexpdf networkD3 sig sos XML]; }; @@ -3559,7 +3618,7 @@ in with self; { RZooRoH = derive2 { name="RZooRoH"; version="0.2.3"; sha256="0ihfc8hxqmlkx1xhkz3psw8szwjp01imasvynxbzrjmjf4q6amvq"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; }; RaProR = derive2 { name="RaProR"; version="1.1-5"; sha256="11hwg609pjcd13qnbchbs86c3q8f4nmh1xfxg3dsiijljl6lzx3n"; depends=[]; }; - RaceID = derive2 { name="RaceID"; version="0.1.5"; sha256="0f1pj9lfxl9xm78sbrwbgzyf1n43i1gpds84wnb4smm7llyqs82i"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; + RaceID = derive2 { name="RaceID"; version="0.1.6"; sha256="0whj7l9a640fm9kcqr2nyn5c3fidfvsrgiv986w4ziqs2jira7mm"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; RadData = derive2 { name="RadData"; version="1.0.0"; sha256="14npn5vjcpvymdjkby83msjr3f1gsmzh0083gz6cgrp270fglkaw"; depends=[]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.5"; sha256="0yz2pzcpz32xs04xfs90i714nn28cky7701w1h99cqsxsp892jkq"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; @@ -3584,18 +3643,18 @@ in with self; { RapidPolygonLookup = derive2 { name="RapidPolygonLookup"; version="0.1.1"; sha256="0h4snn3haa4a5rkafg98419by4nnz219wsm3y0dqgm4hw4bvha0g"; depends=[PBSmapping RANN RgoogleMaps sp]; }; Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; RaschSampler = derive2 { name="RaschSampler"; version="0.8-8"; sha256="0y7dkgv1cy6r1mbmyqm27qwl10rl12g1svpx9jkzq5hq0hnm2xhw"; depends=[]; }; - Rata = derive2 { name="Rata"; version="0.0.1"; sha256="0hal12sric8isljjg7v9nxjqny6rfqzd0yx492p1h2c3qh9ly3zb"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2 Rirt]; }; + Rata = derive2 { name="Rata"; version="0.0.2"; sha256="1s7am08691lil5hbd8jpa5wnbvr0qqf0gkxczpm6yvizbjpx16qx"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2 Rirt]; }; RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; }; RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2.2"; sha256="15xkfjp0bkx9wjp8y27vs0iq2ir4qxjdl8405ix59sjb6lkvv3l2"; depends=[ggplot2 pROC]; }; RationalExp = derive2 { name="RationalExp"; version="0.2.2"; sha256="0a51sfps3sfb71m93jdsmbvj6kafbyfrq790ix238j570f5xafpg"; depends=[snowfall]; }; - Rbeast = derive2 { name="Rbeast"; version="0.2.1"; sha256="03m7461j816sgdr3xvv6llyblmkcnhfxsrfiraqslg197xjbj978"; depends=[]; }; + Rbeast = derive2 { name="Rbeast"; version="0.2.2"; sha256="12i6jm7x1hwkj6skva9sli02rm4krzb2gmzny68d9cjhdcan5baq"; depends=[]; }; Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; RblDataLicense = derive2 { name="RblDataLicense"; version="0.2.1"; sha256="1jvy4r3qnyxwa4vai04lsfrf4dgbfg6gpvk4mvzicgdxlnfphrg9"; depends=[RCurl xts]; }; Rblpapi = derive2 { name="Rblpapi"; version="0.3.10"; sha256="14wkrjfbjc3rb3159sz8wdvshmrh3d17s01swp59s8if7hr94hq0"; depends=[BH Rcpp]; }; - Rborist = derive2 { name="Rborist"; version="0.2-2"; sha256="0hmq2ph0bcj49lxrb1kvd78x82nc8sb1j629ncifp1y0aynvsa7z"; depends=[data_table digest Rcpp]; }; - Rcan = derive2 { name="Rcan"; version="1.3.72"; sha256="1c2a0p6nc040irgmg50bw0w43ad55flrni8k37avpns1m9k309h1"; depends=[data_table ggplot2 scales]; }; + Rborist = derive2 { name="Rborist"; version="0.2-3"; sha256="0qf4m6ibr4mlrmsybb5b8f1hkmp9n6ksjsxc4msd3q4rr99zkczk"; depends=[data_table digest Rcpp]; }; + Rcan = derive2 { name="Rcan"; version="1.3.80"; sha256="1p9df622sqgmfxargwj63pgpdhqr1bc66y07sr6dv1j038776ysj"; depends=[data_table ggplot2 scales]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-2"; sha256="1nsxy5vpfv7fj03i6l5pgzjm0cldwqxxycnvqkfkshbryjcyl0ps"; depends=[]; }; RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; }; Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; }; @@ -3603,14 +3662,14 @@ in with self; { Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; RchivalTag = derive2 { name="RchivalTag"; version="0.0.7"; sha256="0i25rj3f54km2gdr8izgvqdbdbcq4nikywn5narm7sg79fv43pd4"; depends=[mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; }; Rchoice = derive2 { name="Rchoice"; version="0.3-1.1"; sha256="0nmbb6wfgz164fncljnsr11j2w1hi235hysxn1p2mgc6l301rqhm"; depends=[Formula maxLik msm plm plotrix]; }; - Rclean = derive2 { name="Rclean"; version="1.0.0"; sha256="065jq957xsk9p1nnzf8ilp9swjfxhydgc7xg57lfcg9hz99ckwfr"; depends=[formatR igraph jsonlite]; }; - Rcmdr = derive2 { name="Rcmdr"; version="2.6-0"; sha256="0g0xa7dp6k0vr1rd1fnd7fsxyrvx86y6yxwi0vxnw1r9yiycg0s2"; depends=[abind car effects formatR lme4 RcmdrMisc relimp tcltk2]; }; + RclusTool = derive2 { name="RclusTool"; version="0.91"; sha256="14xvfd7g81dw57kjfl8lgq936p9qr0bfm0zmi6fa65ci6di28h8f"; depends=[class cluster conclust corrplot e1071 factoextra FactoMineR ggplot2 jpeg MASS mclust mda mmand nnet png randomForest reshape sp stringi stringr tcltk2 tkrplot]; }; + Rcmdr = derive2 { name="Rcmdr"; version="2.6-1"; sha256="1slwflnz64lbps16jzp2s0cjcns0cpxbh9mb4925l4xg08mc1a27"; depends=[abind car effects lme4 RcmdrMisc relimp tcltk2]; }; RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.5-1"; sha256="10cnvk541cx8lzapra2104dn1kh780phzz29dwvfwrx4k9vfbh7i"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; RcmdrPlugin_EBM = derive2 { name="RcmdrPlugin.EBM"; version="1.0-10"; sha256="02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw"; depends=[abind epiR Rcmdr]; }; - RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.40"; sha256="1vsr7krkcz7qxx938r5fbaf5ag5n2pppabnqqhxp4w4xaidba1nq"; depends=[Rcmdr readstata13]; }; + RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.41"; sha256="0h84rr7scqpds1z0mbmsrhxppdh9rxykc5chvzvniab9hz2h7p05"; depends=[Rcmdr readstata13]; }; RcmdrPlugin_EcoVirtual = derive2 { name="RcmdrPlugin.EcoVirtual"; version="1.0"; sha256="0q879wnrmgbaddv883q9zdnp0i7kjcgn8cffv7lp8nrsqil6l7mc"; depends=[EcoVirtual Rcmdr]; }; RcmdrPlugin_Export = derive2 { name="RcmdrPlugin.Export"; version="0.3-1"; sha256="17fn3si6b6h20c52k1k6fv9mslw3f9v0x1kxixzcvq54scdx0sk0"; depends=[Hmisc Rcmdr xtable]; }; RcmdrPlugin_FactoMineR = derive2 { name="RcmdrPlugin.FactoMineR"; version="1.6-0"; sha256="07k9x3mdaqzk1503wjsha9f8bxzw1074i9g7sa16yqz5lwky4lr7"; depends=[FactoMineR Rcmdr]; }; @@ -3649,12 +3708,12 @@ in with self; { RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.10"; sha256="02rs5xdj6g57frndc87fly0ans16584j4d0rfpy1h72655cz66ab"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="1.0.2"; sha256="170jlmjrs92z5qdv58badhxycjvfjpqwwpic7rm13pc9zkb3i4xd"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="1.0.3"; sha256="03h3zyjq948y0hrrs95lfk4zgx6wfrg64hjlrfrzf5na7bfh0d9b"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; RcppAPT = derive2 { name="RcppAPT"; version="0.0.5"; sha256="0188sabgfmgh83yr3hmqpg5cmhllfkxzbxxchqr2r2fmj6x0ib1a"; depends=[Rcpp]; }; RcppAlgos = derive2 { name="RcppAlgos"; version="2.3.4"; sha256="1rmadfvavjn17xs0fs93h2dahil5nqg0w59f4zdsnn193cwcfi7p"; depends=[gmp Rcpp RcppThread]; }; - RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.13"; sha256="1jibp9b07c5ka1kif0nl7f168hxfvysj32wnmnxg85l663hmvm8j"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.700.2.0"; sha256="0g25w32dnqrvhnri8x4yxqawxd8qhn7w3m8d29nxxy0gybx3y8x9"; depends=[Rcpp]; }; + RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.14"; sha256="1wiigx5g5788j6lyc3f6bs1rsvc4alyc3052g35hxl1giinxmhn4"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.800.1.0"; sha256="1frg7y3fb571jf9dp1kkc75x0nxvw8j3qccsrm1brg5l1z2jmlaz"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.6"; sha256="1bkrzdcm18z7qfkcfq5yc4s8z6a43y6cfsa09k6j9ni9bl2pd6hf"; depends=[Rcpp]; }; RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; @@ -3665,12 +3724,12 @@ in with self; { RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; RcppDist = derive2 { name="RcppDist"; version="0.1.1"; sha256="02g57xwfipdcljv06krhm02dbqn9kfyj2km6rdg0a7vq9prwdz1x"; depends=[Rcpp RcppArmadillo]; }; RcppDynProg = derive2 { name="RcppDynProg"; version="0.1.3"; sha256="099hbm355d30rwxqjd7j4dfw678551dc5v4y7yy6q4xxyf527lbs"; depends=[Rcpp RcppArmadillo wrapr]; }; - RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.5.0"; sha256="01bz41c29591ybzqn4z88ss036ai3anh9figryvmfpqcfwbszip5"; depends=[Matrix Rcpp]; }; + RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.7.0"; sha256="1b78qcjim0n9klgkr82n794d6bj9r9f33g0kcsszsns2hir65sk2"; depends=[Matrix Rcpp]; }; RcppEigenAD = derive2 { name="RcppEigenAD"; version="1.0.0"; sha256="18zm9hsfqwiicxsdm87ix3qc261ljxxn2s736p6aayx82b6vwkz6"; depends=[BH functional memoise Rcpp RcppEigen Rdpack readr]; }; RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.10.3.1"; sha256="1kljhf7y2v0kd7jydpd24grba1zm268ak11hdpg3jxz3s32l45ld"; depends=[Rcpp RcppArmadillo]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.9"; sha256="0568zipgjxgmx086mlfpp5n7v8kf50gwrylvhl1bgvzb2vvr9dhj"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; - RcppGSL = derive2 { name="RcppGSL"; version="0.3.6"; sha256="16pdapq31729db53agnb48jkvdm97167n3bigy5zazc3q3isis1m"; depends=[Rcpp]; }; + RcppGSL = derive2 { name="RcppGSL"; version="0.3.7"; sha256="0cnw2k7cfqrm79r6j283aybflxig80x4n4rjkfp2317wf10mrsa5"; depends=[Rcpp]; }; RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.3"; sha256="1qcnn482h9b8aw798frnkza4bzzpihp0pf4s1mj6zmn2ar01hsl0"; depends=[Rcpp]; }; RcppGreedySetCover = derive2 { name="RcppGreedySetCover"; version="0.1.0"; sha256="1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x"; depends=[BH data_table Rcpp]; }; RcppHMM = derive2 { name="RcppHMM"; version="1.2.2"; sha256="0scdzmns1yw2gbarblzd6cbvndlysz54ff17qijiz17ql5cyzly6"; depends=[Rcpp RcppArmadillo]; }; @@ -3680,7 +3739,7 @@ in with self; { RcppMeCab = derive2 { name="RcppMeCab"; version="0.0.1.2"; sha256="0varavfbrqzma176rw0dr9v5chh7pxh5y9g0rs3v7hqnlghp22y2"; depends=[BH Rcpp RcppParallel]; }; RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.3"; sha256="0ffdw5ckkax8j87q0ykjhyp45l7gvxjppdi73kc4r5qxvijll2g3"; depends=[BH Rcpp]; }; RcppNLoptExample = derive2 { name="RcppNLoptExample"; version="0.0.1"; sha256="1fml6hpa12q0lgg5fg6fi9lz6mckwh345pbh95mld2qagzvmg01n"; depends=[nloptr Rcpp]; }; - RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-3"; sha256="15qwjfwx6yrh9sl2gndqfxw0b3iwnkr2nrgrccb6phpj3pdp7vsq"; depends=[Rcpp RcppEigen]; }; + RcppNumerical = derive2 { name="RcppNumerical"; version="0.4-0"; sha256="1a92fql6mijhnr1kxkcxwivf95pk9lhgmhzkshs51h0ybfv5krik"; depends=[Rcpp RcppEigen]; }; RcppParallel = derive2 { name="RcppParallel"; version="4.4.4"; sha256="0p13f2mywjr7gmskf8ri4y8p5yr1bvr4xrpw2w11vdvafwz1vcia"; depends=[]; }; RcppProgress = derive2 { name="RcppProgress"; version="0.4.1"; sha256="0yk01hfv961zyp569682k9igvhnwqyg5j0n5fm63sxigj82l2xhi"; depends=[]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.3"; sha256="0cj95y8jcjm33d65y42f5ijw775kq3mh2p0659mp3i3r9fvaishk"; depends=[BH Rcpp]; }; @@ -3690,7 +3749,7 @@ in with self; { RcppStreams = derive2 { name="RcppStreams"; version="0.1.3"; sha256="06il7q3afaws57m0fxf04f2p5dvs23l1f7gl78pxwzclacdy3839"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.6"; sha256="1nyv4ynryh8vcrzyq01nzj13is40bjhxazlj9ilapyjdv9h5w3bs"; depends=[Rcpp]; }; - RcppThread = derive2 { name="RcppThread"; version="0.5.3"; sha256="1ndidhzzwxcg01kl867a1mm64zgxf4hiaf858zr7dfkr3gzdd3lp"; depends=[]; }; + RcppThread = derive2 { name="RcppThread"; version="0.5.4"; sha256="1mlzng6di30p4nfvq9l3z241vb8rwnpa2yjbafs2vzrl6v3zcfnf"; depends=[]; }; RcppXPtrUtils = derive2 { name="RcppXPtrUtils"; version="0.1.1"; sha256="0jh64c46gp99d2nsih14vx34pamc8i7gkmiy2nj94rx3sxq62yh5"; depends=[Rcpp]; }; RcppXsimd = derive2 { name="RcppXsimd"; version="7.1.4"; sha256="171281f8lbdnnv3q9x5c35ak8fkrymx7llnpv88dlh742z8nny1j"; depends=[Rcpp]; }; RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; }; @@ -3701,7 +3760,7 @@ in with self; { Rcssplot = derive2 { name="Rcssplot"; version="0.3.0"; sha256="1qwrwzyqbwwwjf2zx6712q6wj629vf9rjrgscf0fim10fa6k5grn"; depends=[]; }; Rd = derive2 { name="Rd"; version="0.2.0"; sha256="0kf95h4xx8a2s2spld19niwjikaxkys5y5prwq3b7bryfj0s63v0"; depends=[assertthat pkgcond postlogic purrr rlang testthat]; }; Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; }; - Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.8"; sha256="178zlnpwv3h3s77i749sbvnk3z80dgv14b3xvg3adsh8j6fj6mk2"; depends=[formatR roxygen2]; }; + Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.9"; sha256="029f85visar52002hdpfw5r2zq37kzbr8rgji76nnqi08jk0if4n"; depends=[formatR roxygen2]; }; Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; Rdimtools = derive2 { name="Rdimtools"; version="0.4.2"; sha256="1pklnvg3qrlhskhk2vra38nnqcfdi3fncddm39w9mpxzbzmb62k7"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo RcppDE Rcsdp Rdpack RSpectra Rtsne]; }; Rdistance = derive2 { name="Rdistance"; version="2.1.3"; sha256="03wh6y9h5jgfc6xdncpgyz0v7lqavikp3pf5wwfmm2rqfj7yjr8c"; depends=[]; }; @@ -3719,6 +3778,7 @@ in with self; { Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; Recon = derive2 { name="Recon"; version="0.3.0.0"; sha256="11gag2bl00pcy7ysfycaa58qarh6aigznldkc4kkn2178bl4ii62"; depends=[rootSolve]; }; RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-11.2"; sha256="1gqf236bpxi0hbhv8bxscv78dwdb3z4x105qfyvzky01aydw5zgn"; depends=[ada data_table DBI e1071 evd ff ffbase ipred nnet rpart RSQLite xtable]; }; + RecordTest = derive2 { name="RecordTest"; version="0.1.0"; sha256="1x6w6f2zlp6xb561n5khbf53955kv2ydmy646v7w85ygx9p8hyni"; depends=[car ggplot2 Smisc]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.1.5"; sha256="1b6pp1vdn7jnyl8k828dgkxrx8sy2wyhkrn4rnfavqw4qvhm0mhm"; depends=[dplyr igraph magrittr RJSONIO rlang visNetwork]; }; Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; @@ -3731,7 +3791,7 @@ in with self; { ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.4"; sha256="14xacbi0bfnb9yn5sn1zksc4av08qrncn0glmbfc9x9i88rfz5m2"; depends=[data_table ggplot2 hash]; }; RelValAnalysis = derive2 { name="RelValAnalysis"; version="1.0"; sha256="1jl1gfj44gfkmc1yp6g5wwn4miydwpvxwrg76rnkv9454zrc5pvp"; depends=[zoo]; }; Relatedness = derive2 { name="Relatedness"; version="2.0"; sha256="1aidklwk8q2wdfsmhlbd3vzq9kzsyh4wn1g28biyb6lq7iwq1hl4"; depends=[]; }; - Relexon = derive2 { name="Relexon"; version="0.1.0"; sha256="12c6qqydd3n0yc0yaqzz7hrp295s8dby5imhhpq9ip1cihi3bfqh"; depends=[readr]; }; + Relexon = derive2 { name="Relexon"; version="0.2.1"; sha256="1shq1v3y1jhrnkl3fdnrwv23zrh8dx0k7zwqcvn5dxpd3vzsxqxg"; depends=[readr]; }; Reliability = derive2 { name="Reliability"; version="0.0-2"; sha256="12zsicgbjqih3grbs62pw37x8wlkmnyc7g0yz6bqnfb4ym2yb7fg"; depends=[]; }; ReliabilityTheory = derive2 { name="ReliabilityTheory"; version="0.1.5"; sha256="14k979b9baqnz1gbhbjnp76nvdg5z1sc6p29h3v9qgvwv4aanp4v"; depends=[actuar combinat FRACTION HI igraph mcmc PhaseType sfsmisc]; }; RelimpPCR = derive2 { name="RelimpPCR"; version="0.2.4"; sha256="0svfyh313wawzqx9hfb4cg0wn2ir6nd769z1k3dckdsb8d7xkh3q"; depends=[caret ggplot2 relaimpo reshape2 Rmisc]; }; @@ -3739,8 +3799,9 @@ in with self; { RenextGUI = derive2 { name="RenextGUI"; version="1.4-0"; sha256="0jfg4a85j06wxk8vq2q6j8md2kcss0s7k71218gfh9vybk7hl4h6"; depends=[gWidgets gWidgetstcltk R2HTML Renext]; }; Renvlp = derive2 { name="Renvlp"; version="2.7"; sha256="1h65m1av2z5zj5mmhrf0vspnbws2dp6s6ihyrvcrm24ipcnkvinz"; depends=[Rsolnp]; }; ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; }; + RepaymentPlan = derive2 { name="RepaymentPlan"; version="0.1.0"; sha256="1fd4n24bd5s2kqmls7mmsidblaf8nzm97kz52mfsb6i6fci0pgah"; depends=[]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; - Replicate = derive2 { name="Replicate"; version="1.1.0"; sha256="1iqzg7aspd2h0mc4w059nfz7hcxgbbl15389isrr63zfm0kcsbf6"; depends=[metafor]; }; + Replicate = derive2 { name="Replicate"; version="1.2.0"; sha256="0kqy248c8n7qr5hwzvqm7flnjlwd60c577r1d4vzgfxn7azd5v3v"; depends=[ggplot2 metafor]; }; Replication = derive2 { name="Replication"; version="0.1.1"; sha256="1jf08kd7zwsgrabg14p0ad5ga8gcr2xdiy5mgljb9hz4ffyhb6fs"; depends=[blavaan lavaan MASS mice quadprog rjags runjags]; }; Repliscope = derive2 { name="Repliscope"; version="1.1.0"; sha256="0hij4ng77bkd979ndbhx1nqq2rfb69q23ghyd7illgvgrc79y9mr"; depends=[colourpicker ggplot2 shiny]; }; RepoGenerator = derive2 { name="RepoGenerator"; version="0.0.1"; sha256="0d6s2sqyycaqrg32xdkp3pr5i7qmvwrfrjcd7f94a9y3lz4bz5b5"; depends=[git2r httr rmarkdown rstudioapi]; }; @@ -3749,7 +3810,7 @@ in with self; { RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; Rfacebook = derive2 { name="Rfacebook"; version="0.6.15"; sha256="0hp2mbm0hnyasizszvh5x9hv7z2q633zck1a1gvk36nbxb1shx7c"; depends=[httpuv httr rjson]; }; - Rfast = derive2 { name="Rfast"; version="1.9.5"; sha256="003ghzhq9jnxqdmz3fjn3r32s40lspxrsc5n004n1py1kra0fxmx"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; + Rfast = derive2 { name="Rfast"; version="1.9.7"; sha256="0xk55akq0m4ayi839mx8li9saf8irp40xmbrwwg3rwj0zl1wmx1h"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; Rfast2 = derive2 { name="Rfast2"; version="0.0.4"; sha256="0n4n8krcznrvksfhkhbdzllfn6j79ca1iks3ckmn4vhipyilcafc"; depends=[Rcpp RcppArmadillo Rfast]; }; Rfit = derive2 { name="Rfit"; version="0.23.0"; sha256="1gxxipbh7mskrqwrpk1gf1dn8mp3l1v4hgmzii44bppffnxs7slp"; depends=[]; }; Rfolding = derive2 { name="Rfolding"; version="1.0"; sha256="15lf73zxr1slin9faj9k0z8qkb1g9nb7h080nfv99gsi2ks68ssg"; depends=[]; }; @@ -3766,12 +3827,13 @@ in with self; { RichR = derive2 { name="RichR"; version="1.0.0"; sha256="0z0ri90jqdmw0vwxd1b4wr9if5cgm1gqpf6g9p1fdvncf4sdi9by"; depends=[magrittr metap plyr reshape2]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; - RiemBase = derive2 { name="RiemBase"; version="0.2.2"; sha256="00skgahbmdalb4bq1hyy8rpl81f2x4d977fi1q3qb152q4br9r2w"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; + RiemBase = derive2 { name="RiemBase"; version="0.2.3"; sha256="08dwnzjy7fhipvqb7p4kbhcfhrnz9i025czci6d0a9nnyscqcgfv"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; + RiemBaseExt = derive2 { name="RiemBaseExt"; version="0.1.1"; sha256="17899bsb6s4jaql71hsq5abcnf1ybji5236zwh25apc6k7br14fc"; depends=[cluster dbscan energy fastcluster kernlab Rcpp RcppArmadillo Rdpack RiemBase]; }; Riex = derive2 { name="Riex"; version="1.0.1"; sha256="1jri01s08g819bvw0bgd5z5iaf9rlikkqq993lm0455k909wm34v"; depends=[dplyr ggplot2 httr purrr quantmod rjson stringr tibble tidyr tidyverse TTR urltools xts zoo]; }; Rilostat = derive2 { name="Rilostat"; version="1.0.1"; sha256="0k8x2z3vxfwbynn22wpkfbc1i237bl61dh612nhw19c7v48lhdgg"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; Rinstapkg = derive2 { name="Rinstapkg"; version="0.1.0"; sha256="0fvj4jc00g5b8cc4mrsjj72fdcdmvlky05s2ca0g2gndrjs6vxic"; depends=[digest dplyr httr jsonlite lubridate purrr readr rlang uuid]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; - Rirt = derive2 { name="Rirt"; version="0.0.1"; sha256="149w9fqhy1jay1701y2mary48v7gkx302jrdd0zccn6zf2w3l42g"; depends=[ggplot2 Rcpp reshape2]; }; + Rirt = derive2 { name="Rirt"; version="0.0.2"; sha256="0npd2g3a4dh5hlj6l06k1pf0j4731ybqqd4mpi4id16nf81cg104"; depends=[ggplot2 Rcpp reshape2]; }; Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.2"; sha256="10kgr05npq9gyhglvpzk49hsr44rgscnygkv3b0gz7f6jxqkfj9z"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; @@ -3781,14 +3843,14 @@ in with self; { RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.3.2"; sha256="1axhvc0x0a556p33jz554pp8yww6jy00sxs3wrdrrxz1fvgcla0a"; depends=[httr jsonlite Rcpp]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.3.3"; sha256="14jiksm93c8qn9x0slc5v1f5d1fxcyg2fdxd82czdgp8j2ijwh55"; depends=[httr jsonlite Rcpp]; }; Rlda = derive2 { name="Rlda"; version="0.2.6"; sha256="0i8n01h9072q339p1kiqhcpwphw0d2x6bsszbhgfqc2b160dk2bl"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlgt = derive2 { name="Rlgt"; version="0.1-3"; sha256="0g610v5rch5s31gc7dy9zx4mcgsdhn82y1pmr2rs14qma0v7x515"; depends=[BH forecast Rcpp RcppEigen rstan rstantools sn StanHeaders]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.1"; sha256="06bb939awawpwn4g63b9jzq5b658lsznzy272zl0fy19x62c6bwr"; depends=[Rcpp]; }; Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; Rlinsolve = derive2 { name="Rlinsolve"; version="0.3.0"; sha256="1kvlpfrw4w2dykpdym9sg6h2ghavnm7lwxn6bzqldwg53wlinvxk"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo Rdpack]; }; Rlof = derive2 { name="Rlof"; version="1.1.1"; sha256="1px6ax2mr2agbhv41akccrjdrvp8a9lmhymp0cn8fjrib0ig8vql"; depends=[doParallel foreach]; }; - Rmagic = derive2 { name="Rmagic"; version="1.4.0"; sha256="0xf2zc9p0y9z2a26w79p3b7hggk78zyiszbyq269s0v6i3h29gy0"; depends=[ggplot2 Matrix reticulate]; }; + Rmagic = derive2 { name="Rmagic"; version="2.0.3"; sha256="0g2f887v820rjyjzcahfrnjvif8iwbhnfnjpd4ib3d9lps69agx1"; depends=[ggplot2 Matrix reticulate]; }; Rmalschains = derive2 { name="Rmalschains"; version="0.2-6"; sha256="1dp0nys320i7pa7c0smz57vj6jk7wjvrnnn90z5w7m6xdb4rm369"; depends=[Rcpp]; }; RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.17.0"; sha256="09lrrxnkkfnbidnmag1czx2xzssdl09348nkc6pqgq6xz36a3mqc"; depends=[dplyr ggplot2 lazyeval lubridate plyr raster rlang tibble tidyr zoo]; }; RmecabKo = derive2 { name="RmecabKo"; version="0.1.6.2"; sha256="1i08wlfd14wmvwrsvjyhgzxkwzfp4jiwbzymw8m25pvyjxgi7jmy"; depends=[Rcpp stringr]; }; @@ -3798,22 +3860,23 @@ in with self; { Rmosek = derive2 { name="Rmosek"; version="1.3.5"; sha256="18q39n2p3gms9zqrl8g15rjjk4v64365v0rm8r7zvvivh1hy5xa0"; depends=[]; }; Rmpfr = derive2 { name="Rmpfr"; version="0.7-2"; sha256="1zq3as34r27v2yc729731997wdhxb6cs5ilmak4nmsljabnac7gc"; depends=[gmp]; }; Rmpi = derive2 { name="Rmpi"; version="0.6-9"; sha256="1rhycla98hxgnnxlxxldr1x51djak7c2jjvlrv3jcsvgwp1ymqdj"; depends=[]; }; + Rmst = derive2 { name="Rmst"; version="0.0.3"; sha256="1fykpii17k460qlsjhhh5vag02lhkyk5l3zjmg8hifqp0cjhz2fl"; depends=[ggplot2 Rata reshape2 Rirt]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; RndTexExams = derive2 { name="RndTexExams"; version="1.5"; sha256="17azzxcawqqvfdbw1i34n03bj5yla8npyi7xh3pnx22xb7sbwq3x"; depends=[data_table stringi stringr]; }; Rnets = derive2 { name="Rnets"; version="1.2.1"; sha256="08441hhmf1i97z5xb9pq651y6hwr2yraiyg1ns7qkxm2svz3kwxs"; depends=[data_table glasso ICSNP igraph rlang stringr]; }; - Rnightlights = derive2 { name="Rnightlights"; version="0.2.4"; sha256="0r6yh3fk8sdpnqz1dk1b8hrpslim6mh8khxh56i3qh5s1plpwxcs"; depends=[cleangeo curl data_table doSNOW dplyr ff ffbase foreach lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings snow sp stringr xml2]; }; Rnmr1D = derive2 { name="Rnmr1D"; version="1.2.4"; sha256="0n2nqxn3js3avnln9y5718r73rplr0mcyak70gwhzw4mph2z6i26"; depends=[base64enc doParallel foreach ggplot2 igraph impute MASS MassSpecWavelet Matrix plotly plyr ptw Rcpp signal speaq XML]; }; Rnumerai = derive2 { name="Rnumerai"; version="0.3"; sha256="0zvfp9zp73gm6pflf9bx1xk1s45xwwvcd56cbris08d2zfj3b3nl"; depends=[httr lubridate]; }; RobAStBase = derive2 { name="RobAStBase"; version="1.2.1"; sha256="0dn93bcyz9kxbj38sc1wisfa6v0666v9gk6y3zq0ihjkkhkmdwq3"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; RobAStRDA = derive2 { name="RobAStRDA"; version="1.2.0"; sha256="1s84j5in4av9zbbszv8j2rpigrd9ws9h4hz64jw7xagsj3xb49kz"; depends=[]; }; RobExtremes = derive2 { name="RobExtremes"; version="1.2.0"; sha256="150p94f0g75g54qcaq4x45lk4sxiyvv1zs4hxkicf46raybvsv89"; depends=[actuar distr distrEx distrMod evd RandVar RobAStBase RobAStRDA robustbase ROptEst startupmsg]; }; + RobGARCHBoot = derive2 { name="RobGARCHBoot"; version="1.0.0"; sha256="0m739ix7qj89ppz3k87pc5rgiasmgii467l95clkn6wschfnpfgx"; depends=[Rcpp RcppArmadillo]; }; RobLox = derive2 { name="RobLox"; version="1.2.0"; sha256="1lcylkskfidg576lqfi84l14rvrpfbzmr53hcgzzmfipxhli4dr8"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; RobLoxBioC = derive2 { name="RobLoxBioC"; version="1.2.0"; sha256="01lydp67v7mc4v3svsnl4zqq2jy1czwg9l9blngjn9ky0hv3haf5"; depends=[affy AnnotationDbi beadarray Biobase BiocGenerics distr distrMod lattice RColorBrewer RobLox]; }; RobPer = derive2 { name="RobPer"; version="1.2.2"; sha256="0631qfpz61606r50vzn7b3h7arfwxcs8j13q1hg779qx60kwrliy"; depends=[BB quantreg rgenoud robustbase]; }; RobRSVD = derive2 { name="RobRSVD"; version="1.0"; sha256="07z5fw8j5lq7nyxgkvb9i4iwb5inddz2ib4m2bjx6q4c1ricpqz9"; depends=[]; }; RobRex = derive2 { name="RobRex"; version="1.2.0"; sha256="1npgbdvdzb0p0w77fsngrwg968y621p3lx8qw69ns8qgxjkismqp"; depends=[distr RandVar RobAStBase ROptRegTS]; }; RobStatTM = derive2 { name="RobStatTM"; version="1.0.1"; sha256="05bhly32gi5w5n4w7c276dfvyj9ax1kfiwlj2s7x7l6r8yxkjp25"; depends=[DEoptimR DT fit_models ggplot2 gridExtra PerformanceAnalytics pyinit robust robustbase rrcov shiny shinyjs xts]; }; - RobinHood = derive2 { name="RobinHood"; version="1.2"; sha256="1rp1bcmr31qdmxapmxc9xyq8chj555hgbpbd7zdpvxjf1l1v5vlb"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; + RobinHood = derive2 { name="RobinHood"; version="1.2.1"; sha256="0lq06m7zdny5230afssr8cjx7rlfnhmrzi02972dqcc6w9p62270"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-4"; sha256="17qjfpagz0wpl8hbyksnag51nj6b9arl9mk5a56avykd2nii95kd"; depends=[robustbase survival]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.1"; sha256="0wsnvryvrl37acljrda2dm1d8aynqiy66yd2i857m035whixfpqa"; depends=[Rcpp RcppEigen RobustGaSP]; }; @@ -3833,6 +3896,7 @@ in with self; { Rpdb = derive2 { name="Rpdb"; version="2.3"; sha256="0zy5f7bli6ppc9giwf8845mzjcv54r2sqb8hxwgbn9k6rjlszgi8"; depends=[rgl]; }; RpeakChrom = derive2 { name="RpeakChrom"; version="1.1.0"; sha256="1r8f6knpz83arz2kabizx5yyh1myg0h310qlwh8rmy88cdxi1ps9"; depends=[ggplot2 minpack_lm pracma ptw]; }; Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; + Rphylopars = derive2 { name="Rphylopars"; version="0.2.11"; sha256="0bqiicdhfv4p6a04b8kvlyg7vmw49br1932fqvr7009jdjf428jp"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; Rpipedrive = derive2 { name="Rpipedrive"; version="0.1.1"; sha256="1rf16q0wfmd3n9idiqpmdhcw7sq27yk2cy9gfl5l6bzj0y6ax1q8"; depends=[httr jsonlite]; }; Rpoet = derive2 { name="Rpoet"; version="1.1.0"; sha256="11gp4zg0wc2a21956355rkr3i3dyaabfz0z30z4phn8s7y3yqr92"; depends=[]; }; Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.4.2"; sha256="0q50f0pp72rwmflxwnridjrcl649kz5h2fm8jfz2pn473mghhya8"; depends=[digest dplyr futile_logger geometry git2r R6 rgl stringr testthat XML]; }; @@ -3841,9 +3905,9 @@ in with self; { Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; Rquefts = derive2 { name="Rquefts"; version="1.0-5"; sha256="0c3738rn3abmah61kxyys3ab807r7mhcj10shkraq3li6v7aw5kv"; depends=[meteor Rcpp]; }; Rramas = derive2 { name="Rramas"; version="0.1-6"; sha256="16aapvz9j81lvi5ryj41bvn3wf51b0gynnzs0jpvva4m3mvzw6an"; depends=[diagram]; }; - Rraven = derive2 { name="Rraven"; version="1.0.7"; sha256="0a08a3mix61lwndagmmm2aqlmw3zqfd1rjwg0yxxc20j4ns6h4hh"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; + Rraven = derive2 { name="Rraven"; version="1.0.8"; sha256="00qlisn7026y0dhgb9ig8liky5k8xrw7app5dj6f8123bi6ligv6"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-16"; sha256="0j9yyvq8r1cgwj3kw1ak6hyazr67f2q0c1m651wdm0wcvm1ajx7f"; depends=[]; }; - Rsagacmd = derive2 { name="Rsagacmd"; version="0.0.1"; sha256="15lk35kb69q55z7mjv4ar5nkfn6nkah802272jp9wvf5r5zlw5zp"; depends=[foreign magrittr minpack_lm raster rgdal rlang sf stringr XML]; }; + Rsagacmd = derive2 { name="Rsagacmd"; version="0.0.2"; sha256="02mz1q6zjrrjrf40d8y7xpzilk2f14zpsczcw9qr5v9zzch4kjxb"; depends=[foreign magrittr minpack_lm raster rgdal sf stringr XML]; }; Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.2"; sha256="1wz3dp1myjkxzf9l5mfli3dfbkc2fwg70xx7m9cxa06vq0a4w5pv"; depends=[ape haplo_stats Rcpp]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rsconctdply = derive2 { name="Rsconctdply"; version="0.1.3"; sha256="12xc1laxgivv4szp8341pvhmxnzzzzc2s4jhnqsqrbx71lbd9szg"; depends=[dplyr rjson rsconnect]; }; @@ -3861,6 +3925,7 @@ in with self; { RtextSummary = derive2 { name="RtextSummary"; version="0.1.0"; sha256="1kqzml8zmkqx6200g2jw5mmg5g043h6mr1skms1c2q905avd46gv"; depends=[dplyr Matrix_utils mlapi R6 stringr text2vec tidyr tokenizers]; }; Rtextrankr = derive2 { name="Rtextrankr"; version="1.0.0"; sha256="16dby3xsfcjyp35xdflmgnh7zkqygfbffvj4jqa565vj9ksnq5ir"; depends=[igraph KoNLP sets stringi]; }; Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; + Rtrack = derive2 { name="Rtrack"; version="0.9.3"; sha256="0b73cr299hv2k6ia4ama6ciq9506wy2w2cyh1bv5wdqiyvf8hzia"; depends=[crayon KernSmooth openxlsx pbapply randomForest raster readxl rgeos rjson sp]; }; Rtsne = derive2 { name="Rtsne"; version="0.15"; sha256="0v17vxizrs1msay24xl2bckfajr2c82wpqj07lyssbrq197nwdsn"; depends=[Rcpp]; }; Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.7"; sha256="12hf9r3mhjr9sawdvf7qhjf1zph2q64f77i81jwvy7awidbm0kja"; depends=[]; }; RtutoR = derive2 { name="RtutoR"; version="1.2"; sha256="19wmi30b5i6zj673d76gxl6j0k3ppfyl5fqrcs0dwmmadrrvbajq"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes officer plotly rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; @@ -3876,15 +3941,16 @@ in with self; { Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1.1"; sha256="0kaxhaa65k1hkhl4kqfxyyk6v967xncrdr5hy8b808zlbqriankc"; depends=[]; }; Rwordseg = derive2 { name="Rwordseg"; version="0.3-2"; sha256="10jhfalh45rrcm76hwz4b5yl408ndx2wkr0i3q1avx6z6i45d8s6"; depends=[HMM tmcn]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-4"; sha256="0qyhxqd5yi4d1prj0i4g3k29zi0mx6wkjx24ynb4arxw6h1vabh4"; depends=[coda lattice MASS MCMCpack mvtnorm]; }; - RxODE = derive2 { name="RxODE"; version="0.9.1-4"; sha256="0bfrk7ajpfwfp5f6p34wr8w9fx507j9yvr81v3szjnv1sbrwbwg4"; depends=[assertthat brew cli crayon digest dparser ggforce ggplot2 inline lotri magrittr Matrix memoise mvnfast pillar PreciseSums Rcpp RcppArmadillo remotes rex sys units]; }; + RxODE = derive2 { name="RxODE"; version="0.9.1-8"; sha256="01a1f6lwfqpx8jrm1gnmc9mh69zjd53s8s3dmymxyq7lpj62b1qk"; depends=[assertthat brew cli crayon digest dparser ggforce ggplot2 inline lotri magrittr Matrix memoise mvnfast pillar PreciseSums Rcpp RcppArmadillo remotes rex sys units]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; Rxnat = derive2 { name="Rxnat"; version="1.0.6"; sha256="1wzb4dihzbyp23yggi1n7c5ikbq6h2gl9v7bgwxf00y2gwlabjx4"; depends=[httr RCurl]; }; - Ryacas = derive2 { name="Ryacas"; version="1.0.0"; sha256="1jgii90mm3z8djrq6hir49zr739z1wzlcq8py6xfjkqg87g1dlrn"; depends=[magrittr Rcpp]; }; + Ryacas = derive2 { name="Ryacas"; version="1.1.1"; sha256="0gp9ab106c0x9za4laqa08g6cyzpwr2gpbfibk4spr45fldz2969"; depends=[magrittr Rcpp]; }; + Ryacas0 = derive2 { name="Ryacas0"; version="0.4.2"; sha256="0k8q9v9016x8vfskwa6zmh2rbblqqfk8bryxslxaj8irzvkggnvl"; depends=[Rcpp settings xml2]; }; S2sls = derive2 { name="S2sls"; version="0.1"; sha256="0qq1rff2cdgrm5rj69jxgrl71i0wmzyn424fdvcg02zdv9ggqhd3"; depends=[spanel]; }; SACCR = derive2 { name="SACCR"; version="2.3"; sha256="0q5fpzmfj08mzxbxksi5fgkfw8n4zsmh37zqnbwkz30llh620hgv"; depends=[data_tree jsonlite Trading]; }; SACOBRA = derive2 { name="SACOBRA"; version="1.1"; sha256="123kbksamx30l4kib8pkv44knra8yqhvjwbx61xxi7k88qaxvmin"; depends=[mgcv R6 testit]; }; SADEG = derive2 { name="SADEG"; version="1.0.0"; sha256="02ilykbdanx1isbd80c43hqpzkckq6dg40y0rklcnck6v96qky3n"; depends=[]; }; - SADISA = derive2 { name="SADISA"; version="1.1"; sha256="00qixqbbkpc8g8nmggvrknsc03v9w04nb4dlcq91fs7g76rpzs92"; depends=[DDD pracma]; }; + SADISA = derive2 { name="SADISA"; version="1.2"; sha256="0yn7f360wl5ykys5zln159xh2h8bx7zb5ddwhv1migjlqry506hp"; depends=[DDD pracma]; }; SAFD = derive2 { name="SAFD"; version="2.1"; sha256="078ki9wrmcf80bwhx4d56gas79xrc17a0081i13yxvjqn6w7f7jd"; depends=[]; }; SAGMM = derive2 { name="SAGMM"; version="0.2.4"; sha256="18ig7ncmrfs5cyc28xpbqk9zjhwqfp7gwix7y2v1j4j2wbdc2hzs"; depends=[lowmemtkmeans mclust MixSim Rcpp RcppArmadillo]; }; SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; @@ -3904,7 +3970,7 @@ in with self; { SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; }; SASxport = derive2 { name="SASxport"; version="1.6.0"; sha256="1g8sfi61im9i04whybwqq4rl6glisbziqaag1mdfqykxryakjf04"; depends=[Hmisc stringi]; }; SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; }; - SAVER = derive2 { name="SAVER"; version="1.1.1"; sha256="1jkyxnpvbm6zrhf2q9i98gchv786wh83mx0i1vnz2hqa766jk2nj"; depends=[doParallel foreach glmnet iterators Matrix]; }; + SAVER = derive2 { name="SAVER"; version="1.1.2"; sha256="1s1kw8idkaj7j90fw4qn9k0wd4vz0sblsk06ry6lm4afcar0p158"; depends=[doParallel foreach glmnet iterators Matrix]; }; SAutomata = derive2 { name="SAutomata"; version="0.1.0"; sha256="0d9q7bm2f7s4aslml40n43vwcdkc8rnn9ygydccwi4b9a7y23k58"; depends=[]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; @@ -3920,20 +3986,21 @@ in with self; { SCI = derive2 { name="SCI"; version="1.0-2"; sha256="1jvzkdv15ifgf6a3zjfzzcgw2y2vg0wp7yhiamiaqp8xkm142w49"; depends=[fitdistrplus lmomco]; }; SCINA = derive2 { name="SCINA"; version="1.2.0"; sha256="1gv9widjwvk5j535r1zx6f41ylpa2r4168ya580llgblx85z402d"; depends=[gplots MASS]; }; SCMA = derive2 { name="SCMA"; version="1.3.0"; sha256="0izpbvgimqyj529nzng94p0cvmz9l545b3ra4ycc23rsbg50q315"; depends=[]; }; + SCOR = derive2 { name="SCOR"; version="1.1.0"; sha256="0r462g3wciz0kkvzwnd7660giy16q8bk8chm73syrw4fnfk2vdkv"; depends=[doParallel foreach iterators]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.4.1"; sha256="00cmlgi5kvi4q8pnq41hbq47243vkycrfplykmkjj9fdnzrlqs8h"; depends=[dplyr dyndimred dynutils ggplot2 MASS Matrix mclust pbapply pheatmap princurve purrr ranger RColorBrewer tidyr TSP]; }; SCPME = derive2 { name="SCPME"; version="1.0"; sha256="0yhsaaa349wbrswcvp7w8c52wzp7rs3528rs4wqa8b3r3fh983mh"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; - SCRABBLE = derive2 { name="SCRABBLE"; version="0.0.1"; sha256="15k8fqcyvbqminqf41n9wx3xm7bg8v47g5vaf65aclj5wn2gn5y2"; depends=[ggplot2 gridExtra pracma rARPACK RColorBrewer Rcpp RcppEigen reshape2]; }; SCRSELECT = derive2 { name="SCRSELECT"; version="1.3-3"; sha256="118vwnd5gggvdhq7fbs0553l84vh5mhiag41q4svprd7p0pqd9hd"; depends=[mvtnorm]; }; SCRT = derive2 { name="SCRT"; version="1.3.0"; sha256="0668hjp7m1g7nx4p3ip0z83f1qn83pz0hdkjxxsnl1a8jwgb2748"; depends=[]; }; SCVA = derive2 { name="SCVA"; version="1.3.0"; sha256="1s29pcx8rhgsnmha78nylvzr8wbffaczb2wbc15x04vd96xp7513"; depends=[ggExtra ggplot2 plotly scales]; }; SCperf = derive2 { name="SCperf"; version="1.1.1"; sha256="1kqi3sv9ds58l20pdcnjrrbf7fin82j73yqj5rbx4kjdw560ylb2"; depends=[]; }; SDALGCP = derive2 { name="SDALGCP"; version="0.2.0"; sha256="04yqa0dlr4p6fpc4dsiqwb02j056fz9j8qwf7939b5hpg8k9qwjg"; depends=[geoR maptools mapview Matrix pdist plyr PrevMap progress raster sp spacetime spatstat splancs]; }; + SDAR = derive2 { name="SDAR"; version="0.9-3"; sha256="173qssvca1ds37x3518q3vfl2185b4fnkprvb52pp7mpv1w1xdrp"; depends=[grImport2 linbin readxl]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; SDLfilter = derive2 { name="SDLfilter"; version="1.2.1"; sha256="1chvg3vh5mwsczbv2ayq9pj1my1i4m2dmr7az1hh00yvlvilfp0y"; depends=[data_table geosphere ggmap ggplot2 ggsn gridExtra maps raster sp trip]; }; SDMPlay = derive2 { name="SDMPlay"; version="1.2"; sha256="0kafj5z1fi5d824h0n23qzn8a6n8fqm3bfc0pdfypzbaj2arjz3k"; depends=[dismo gbm raster SDMTools]; }; - SDMTools = derive2 { name="SDMTools"; version="1.1-221.1"; sha256="1fsgnlc7glawimzijp11j53g5bnfp1mdq9wb0754idmxcdi8a99q"; depends=[R_utils]; }; + SDMTools = derive2 { name="SDMTools"; version="1.1-221.2"; sha256="1xvcd97ikqsfdpk2fddy3k0z1ajqga7nv9bgac9c1wnjk1gqrpgh"; depends=[R_utils]; }; SDMtune = derive2 { name="SDMtune"; version="0.2.0"; sha256="03bcgmyj3r0bh6ak7bq2skr7mr57qdszpnivjpxr5xisdbws6hkb"; depends=[cli crayon dismo gbm ggplot2 htmltools jsonlite kableExtra maxnet nnet plotROC progress randomForest raster rasterVis Rcpp reshape2 rstudioapi scales stringr whisker]; }; SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; @@ -3975,17 +4042,19 @@ in with self; { SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; SIRE = derive2 { name="SIRE"; version="1.1.0"; sha256="0f624j087k7krg73bqn2qxdgzq66jyhvzz8n024vz3h4hwagxs5n"; depends=[dplyr igraph magrittr MASS Matrix matrixcalc numDeriv psych Rsolnp stringr systemfit]; }; SIRItoGTFS = derive2 { name="SIRItoGTFS"; version="0.2.4"; sha256="1hyhjwkv26fpplzqrdh41r8j91la5j0jidbwnh2vla6s3wf7jg47"; depends=[data_table dplyr easycsv reshape2 rgdal rgeos sp]; }; - SIS = derive2 { name="SIS"; version="0.8-6"; sha256="1749ks5iqlj6lrn0hglifj1iy86dcpqz2pcnf1l798pa05rq8ngd"; depends=[glmnet ncvreg survival]; }; + SIS = derive2 { name="SIS"; version="0.8-7"; sha256="17fvl58qfwdfn29x9ar9w9v3a26cihcnqb55zgyhmamc57dinchy"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; SIfEK = derive2 { name="SIfEK"; version="0.1.0"; sha256="037ps6yfy7w6i8vm0b78c8w9kdmw312dl5nc2qz86rfk8kjg7w27"; depends=[MASS numDeriv ramcmc smfsb]; }; SK = derive2 { name="SK"; version="1.1"; sha256="19yg7yc2k4zz29bh42lw2jpjvkdj33f26xkfs8vz8lpp98yjf2vx"; depends=[FitAR GD MASS RColorBrewer rgeos rtop sp]; }; SKAT = derive2 { name="SKAT"; version="1.3.2.1"; sha256="0ylfz63xiq2zw9nc8nqr89qbhl3fnkhjgg9x7yxjm78vrn640hkl"; depends=[]; }; SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; SLDAssay = derive2 { name="SLDAssay"; version="1.8"; sha256="04ykj7s9kpvg5bmf7x16154kfpdy45b7y7hhyh31sxlscv7c5bbp"; depends=[]; }; + SLEMI = derive2 { name="SLEMI"; version="1.0"; sha256="1yfyqxl9sszym418p64zalc2yna9s9qgk9wvviz7n44icsdps33q"; depends=[caret corrplot doParallel e1071 foreach ggplot2 ggthemes gridExtra Hmisc nnet reshape2 stringr]; }; SLHD = derive2 { name="SLHD"; version="2.1-1"; sha256="0y3ilxd0phmks8zkmpgw7p5zrkwq4k95h976cwk58pavvhfwj9kb"; depends=[]; }; SLICER = derive2 { name="SLICER"; version="0.2.0"; sha256="10i0hfl6js26n8xwk9pldzm9vv7hmii6gzj04lhqy0g3njds25kp"; depends=[alphahull igraph lle]; }; SLIDE = derive2 { name="SLIDE"; version="1.0.0"; sha256="0x4fm29r7icg33k8gw3vqvxib8n9a1xwg484x9yffybips9ka22c"; depends=[]; }; SLOPE = derive2 { name="SLOPE"; version="0.1.3"; sha256="12naak08qjpn6l1ikqwf17h72zk4b5mppgxx7ks9wmnqy9ylhy3x"; depends=[Rcpp]; }; + SMARTAR = derive2 { name="SMARTAR"; version="1.0.0"; sha256="04v6nvkcjchln8jxa9qm9j2hrxbm8rm9v96v6j313ia8js0krp9q"; depends=[MASS]; }; SMARTp = derive2 { name="SMARTp"; version="0.1.1"; sha256="0gkhl9j4l67brfmln28m4q4hfi271jlg5aijnjwahlj8nsi6384y"; depends=[covr mvtnorm sn]; }; SMC = derive2 { name="SMC"; version="1.1"; sha256="1r4ajgi785lmpnlxrba0n6phmk1f0mb6b5yqk6hx8gng2w8ggclz"; depends=[]; }; SMCRM = derive2 { name="SMCRM"; version="0.0-3"; sha256="1x06w00sdijhg5h1s61q4ym5wgk97pw9md6api7if2cxjv7h5zcy"; depends=[]; }; @@ -4019,7 +4088,7 @@ in with self; { SPA3G = derive2 { name="SPA3G"; version="1.0"; sha256="15f38imwqn1zifym2821q7xysvws9vhlif4g16w0pnvk0wlhyb92"; depends=[]; }; SPADAR = derive2 { name="SPADAR"; version="1.0"; sha256="0xzhcy5nglwx9j2jkm3i9xj1iw1y9wbf6rwfjyhpiwwq6qn8mn5r"; depends=[mapproj RCEIM]; }; SPARQL = derive2 { name="SPARQL"; version="1.16"; sha256="0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc"; depends=[RCurl XML]; }; - SPAS = derive2 { name="SPAS"; version="2019.2"; sha256="1jgqywnkfw5mpkc59c4p9cj4x330rjkdj5v87pxrln8jcx7rcl26"; depends=[BB MASS Matrix msm numDeriv plyr]; }; + SPAS = derive2 { name="SPAS"; version="2020.1.1"; sha256="1bvnyxg3npxv63kikmr30jgc14f1s1a5vfh40qs50nbzq84pl6bx"; depends=[BB MASS Matrix msm numDeriv plyr RcppEigen TMB]; }; SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; SPAtest = derive2 { name="SPAtest"; version="3.0.0"; sha256="0pq8mbj05x4l3lvdgayxigviirhx6ghf4w5bkpvg9hggkb79ib9y"; depends=[]; }; SPCALDA = derive2 { name="SPCALDA"; version="1.0"; sha256="1bmp2zz0favmpyp0ap8a2r1mg1nlan7zg5cj75drdnfpqlsn5vgl"; depends=[MASS]; }; @@ -4046,14 +4115,14 @@ in with self; { SQB = derive2 { name="SQB"; version="0.4"; sha256="12ii8xlwd2r77bj76j7l43898ras25z3plhhv106jaklhpcnk23m"; depends=[caret nnet pls rpart]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.6.3"; sha256="006ahmqrwy2ckq098klvajwfzdmnx58pw0hy1plpw4slp7a3f2ls"; depends=[RODBC]; }; + SQRL = derive2 { name="SQRL"; version="0.7.0"; sha256="166sl5vy1nf854wr9ps66h8166l1l8yla5d6c9icivyik77nqqjv"; depends=[RODBC]; }; SQUAREM = derive2 { name="SQUAREM"; version="2017.10-1"; sha256="10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; SRTtools = derive2 { name="SRTtools"; version="1.2.0"; sha256="1203i6nqclx0faxyvhdaapmfxy8h95jj83svxriqh1hpava5s1dy"; depends=[magrittr]; }; - SSBtools = derive2 { name="SSBtools"; version="0.4.0"; sha256="0rmvqhhw5zv8za3h8m59sqz0857hryn6c1bpsl4bdnyjzjfqa675"; depends=[Matrix stringr]; }; + SSBtools = derive2 { name="SSBtools"; version="0.5.0"; sha256="0z6nzsg8mfmnzzf24w7s7lhkp3xd7vlkgjn34x6yps82ry3mhyra"; depends=[Matrix stringr]; }; SSDM = derive2 { name="SSDM"; version="0.2.6"; sha256="0qyx755h6rqgc6i3mw0vdaw2jx1yclkm9qxb98njkfk8if7wmbmn"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; }; - SSDforR = derive2 { name="SSDforR"; version="1.5.9"; sha256="1m09q2dxpbjnqwsan7wqyj3igzypgrj1dx3i24a8n77ddsw6wr3q"; depends=[MAd MASS metafor psych SingleCaseES TSA TTR]; }; + SSDforR = derive2 { name="SSDforR"; version="1.5.10"; sha256="0gzx16ra5hx3zjrk3ip6f0yzd9sb9gks1njbx1dg0ag9bc007v4r"; depends=[MAd MASS metafor psych SingleCaseES TSA TTR]; }; SSLASSO = derive2 { name="SSLASSO"; version="1.2-1"; sha256="0x9nbq9lsnq9g47y50z2ymfbj09l2d1lbii2cfjm76nzk3k5lb39"; depends=[]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; SSN = derive2 { name="SSN"; version="1.1.13"; sha256="0hk138p1jnlda7d2wxlrf2ipkgliqlip1i5xp67aym979g0b3aaj"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; @@ -4064,11 +4133,12 @@ in with self; { SSsimple = derive2 { name="SSsimple"; version="0.6.4"; sha256="0p7d4hx7mhn5myq8ajcij6hhg79rjxigk5v8z93yfdw4gjcb5wad"; depends=[mvtnorm]; }; STAND = derive2 { name="STAND"; version="2.0"; sha256="07wrpmvk0jjlghvrb37xyai48vgzj0fby8y09qdxsxdlgwqg1f3s"; depends=[survival]; }; STAR = derive2 { name="STAR"; version="0.3-7"; sha256="1g78j4iyh78li1jaa3zz5qv4p41cg0imhmvbfakd34l32ppih4ll"; depends=[codetools gss mgcv R2HTML survival]; }; - STARTS = derive2 { name="STARTS"; version="1.1-6"; sha256="0c1pcknigqbzplcmykr0214kylrl3rjjsnxv4by06icbbj5dscll"; depends=[CDM LAM Rcpp RcppArmadillo sirt]; }; + STARTS = derive2 { name="STARTS"; version="1.2-35"; sha256="0xf5dck1zp1m1bxj8j02yyvg0y79i1y4bi3a6q1k41zixk3hcn2s"; depends=[CDM LAM Rcpp RcppArmadillo sirt]; }; STARTdesign = derive2 { name="STARTdesign"; version="1.0"; sha256="1q61l3v8ishzax3ppy0pz4ky4l46472l6j36hjlsa8cl01ik1zjf"; depends=[Rcpp]; }; STAT = derive2 { name="STAT"; version="0.1.0"; sha256="0x0qpnlcb52k3x8jwiljsamx81hdcjagfpapv63z054bvig0jvgv"; depends=[corrgram dplyr Hmisc psych psycho rmarkdown rpivotTable shiny]; }; STB = derive2 { name="STB"; version="0.6.3.1"; sha256="0fj1cfxqhijpxl41z799zd7id95jsb84ylrbqzrd1jlp80plyw83"; depends=[Matrix VCA]; }; STEPCAM = derive2 { name="STEPCAM"; version="1.2"; sha256="03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; + STGS = derive2 { name="STGS"; version="0.1.0"; sha256="0xfwd0jsg3glbr3c5l5yyri4is5kg77ivgr6qlzaxp6p8q7yfzqf"; depends=[brnn glmnet kernlab randomForest rrBLUP]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; STMotif = derive2 { name="STMotif"; version="1.0.4"; sha256="0667jqpn40y1pw69am59jhkyds9433fm1v67y3vgqi1z1zzpan19"; depends=[ggplot2 RColorBrewer reshape2 scales shiny]; }; @@ -4079,17 +4149,18 @@ in with self; { STV = derive2 { name="STV"; version="1.0.1"; sha256="1gzy47s4qg83fagvm19jwpbbplkvxi9qv6ac0j86i0s8v0yrlrks"; depends=[]; }; STraTUS = derive2 { name="STraTUS"; version="1.1.1"; sha256="0hl8kyg9hsrsqcxg8bcmp5wm70s92scahlac617h2c7rirbjdsxz"; depends=[ape ggplot2 ggtree gmp igraph phangorn RcppAlgos]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; - SUMMER = derive2 { name="SUMMER"; version="0.2.3"; sha256="1g1rsl0wr7gy7apkw6zjy39lch2pcd29h46vjkdg0jsmb8l3hk0d"; depends=[ggplot2 maptools Matrix reshape2 spdep survey survival]; }; + SUMMER = derive2 { name="SUMMER"; version="0.3.0"; sha256="17ymbwga6m2npbvvqqhcnjd89f0jsaz8kwf7n68wwkqvgiqh3qcm"; depends=[ggplot2 maptools Matrix reshape2 sp spdep survey survival viridis]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2.9"; sha256="1405gigyjfp8by8nfx4g3rhw9x6r6g7dkpgw52jllv6n4036xa3h"; depends=[dplyr ggplot2 gridExtra kernlab reshape2 scales]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SVN = derive2 { name="SVN"; version="1.0.1"; sha256="0n93lqb1f2s2qvzc8lrcqmr0fhd57xqbi0ymrqqmll31ns679m92"; depends=[data_table igraph memoise]; }; SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; }; SWIM = derive2 { name="SWIM"; version="0.1.0"; sha256="1mhmffmp0nqq7p6invg4rq4wq984g55fg83ysc9ma8rl584cspyz"; depends=[ggplot2 Hmisc nleqslv plyr Rdpack reshape2 spatstat]; }; SWMPr = derive2 { name="SWMPr"; version="2.3.1"; sha256="1az6ss8wkdgq4l1cmfflajzs7z6w6140bclb289gb090pi69p7gy"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; - SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.1"; sha256="0xhs9fwmj0ba3igliv4qbxdhivfnn2z264ngiz2vvqnkpima0s6w"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; + SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.2"; sha256="0123lcb6jfh3gbh2jmdpargry44fncm7j505vpkcp661fcjckymd"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.3"; sha256="1g00jzghvvhnj2npplh87bwbm479mwldskhard0vjlfmagbhjm8p"; depends=[FD permute RcppArmadillo vegan]; }; SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; }; SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; + SailoR = derive2 { name="SailoR"; version="1.0"; sha256="1gb50qd9s3dwdvl6qihpkgwlhckbhn7h3wpz9k74xgyd874krcld"; depends=[]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.1.1"; sha256="15q1jsvnz3bhnjil0wbladahac0ppx3qgg5qz7z70vnivgjah606"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; @@ -4102,7 +4173,7 @@ in with self; { Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; Scalelink = derive2 { name="Scalelink"; version="1.0"; sha256="0likfjw5999zd0kv1ykby78bl0x3xgh0v1yjssk7fnw1ghkxgdib"; depends=[Rcpp RcppParallel]; }; SchemaOnRead = derive2 { name="SchemaOnRead"; version="1.0.2"; sha256="0xa53mqmv31gid6n82bnfmds6p8nkjlmkj15hyycxhja2j752knm"; depends=[caTools foreign haven ncdf4 network readbitmap readODS readxl tiff xml2]; }; - SciViews = derive2 { name="SciViews"; version="0.9-13"; sha256="11zkq3dz2c7l8qxm3wrr3b5bb9h70sf9qxaz983lqwpjva30baa8"; depends=[ellipse]; }; + SciViews = derive2 { name="SciViews"; version="0.9-13.1"; sha256="0wm4vnjh65jxyg82m8l08kanl414qiaz0cc6srshb8sdx2sixkfi"; depends=[ellipse]; }; ScoreGGUM = derive2 { name="ScoreGGUM"; version="1.0"; sha256="0f7sjfr3a8b8y1n9lrwyiyyljls3rbz84d9s93psi2fnmjj0kvgw"; depends=[]; }; ScorePlus = derive2 { name="ScorePlus"; version="0.1"; sha256="07hmrx1k256i4cs605j5bpg6brzypryxlcnjkzqak8cw4f26k24q"; depends=[combinat igraph igraphdata limSolve RSpectra]; }; ScottKnott = derive2 { name="ScottKnott"; version="1.2-7"; sha256="0jxyz0adywfvz0mks5s3kjkb2hds1g0gswshpl73hr1ypr9n39cx"; depends=[]; }; @@ -4126,9 +4197,9 @@ in with self; { Select = derive2 { name="Select"; version="1.4"; sha256="1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; SelectBoost = derive2 { name="SelectBoost"; version="1.4.0"; sha256="14i6dgg1yqnghjjfvi7l58kqm6pry9b91sy9gkwrvfqg0nz1dpny"; depends=[Cascade glmnet igraph lars msgps Rfast]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemNeT = derive2 { name="SemNeT"; version="1.1.1"; sha256="0magjdc8k1ln8ssfy50ihsnx9ni89j6iir60dbgbwgsyvg8rcqxk"; depends=[doParallel dplyr foreach ggplot2 igraph lsa magrittr NetworkToolbox networktools pbapply plyr purrr qgraph RColorBrewer SemNetCleaner]; }; - SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.1.1"; sha256="0ngnk4pz67caawg3jn46dv5jk4kppfdxhl1823bvzjw5nbw468wa"; depends=[foreign hunspell R_matlab readxl searcher SemNetDictionaries stringdist]; }; - SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.4"; sha256="1vqb4jbg56n45c6avc8srrksw82m2l1w0qf69cxpfd2gac62phrf"; depends=[]; }; + SemNeT = derive2 { name="SemNeT"; version="1.1.2"; sha256="07vgnfj4wirfpc9mjy6m0qd3pc0423qq8bvpk5zzmynvaqgnb89j"; depends=[doParallel dplyr foreach ggplot2 igraph lsa magrittr NetworkToolbox networktools pbapply plyr purrr qgraph RColorBrewer SemNetCleaner]; }; + SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.1.3"; sha256="177r9z2z8l5ri2h3s94day8d19n13hc4861vc6fcymaa35nh0z02"; depends=[foreign hunspell R_matlab readxl searcher SemNetDictionaries stringdist]; }; + SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.5"; sha256="179dgq65m4kzbqxgcicnchahslildc43f506sa7x2prbr7by27d3"; depends=[]; }; Semblance = derive2 { name="Semblance"; version="1.1.0"; sha256="1kzrg5z3244nx9y37p092wpangni3fxpx04i5fb4dhrmav4rvgab"; depends=[DescTools fields msos PerformanceAnalytics]; }; SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.3"; sha256="06anhf0kqaz4i84g73w3l4gf0q2mwi00vlkciqfbxpwgrbacplf6"; depends=[Formula MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.6"; sha256="0nga790kcrvmbrx5asp4062711x0kjsccc246l4syiiw30b769ig"; depends=[MASS numDeriv Rsolnp]; }; @@ -4159,7 +4230,7 @@ in with self; { ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.1"; sha256="1s1kb1rrppk0kfqywgsmyfl32hrq9ywv8241n9d3xv88cflxz237"; depends=[corrplot cowplot CTT data_table deltaPlotR difNLR difR DT ggdendro ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyBS shinydashboard shinyjs stringr VGAM xtable]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; - ShortForm = derive2 { name="ShortForm"; version="0.4.3"; sha256="0v7aq45z1kdmqkrfpas2z2kzdsw6z3v16pp6zmksrnjcd27ri41c"; depends=[ggplot2 lavaan stringr tidyr]; }; + ShortForm = derive2 { name="ShortForm"; version="0.4.4"; sha256="05ia1x8hmaa8df77jbs4nd04jfbglr5z6hfg9v702zhvap0mkijj"; depends=[ggplot2 lavaan stringr tidyr]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.4.0"; sha256="0iyri3syjk9xv49d87fdyhnxg5c5x827vnak8vgckkkp62sdln2q"; depends=[Rcpp RcppArmadillo]; }; SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; }; SiMRiv = derive2 { name="SiMRiv"; version="1.0.3"; sha256="1kzvbzmqcxs0sh23nmjd39zkg68kbnc5djpbjhqhn55qjdfx5776"; depends=[mco raster rgdal sp]; }; @@ -4170,7 +4241,7 @@ in with self; { SignifReg = derive2 { name="SignifReg"; version="2.1"; sha256="01h6cz602m9jpnkpgbr5smmn3xp5aw5h5xl32kyhxqhybg75j6fj"; depends=[]; }; Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.4"; sha256="14qdz49gyjaja6yj053iv998mrib3nbzzf02g30sl5y0cxkpmnd1"; depends=[Deriv MASS]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; - SimBIID = derive2 { name="SimBIID"; version="0.1.2"; sha256="1xn5qpnyna125qpj5si9c94b4kxzj5nd86k3fplygdm51dc0m499"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; + SimBIID = derive2 { name="SimBIID"; version="0.1.3"; sha256="1vbib8ajpph35ahyv0x431y9xscinnvzvjzwhw9l810n1agbfay9"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; SimComp = derive2 { name="SimComp"; version="3.3"; sha256="04qkis20zk0z42bv4nznffqlpwby0y0ij27gj4sa0ha864pg0hi5"; depends=[mratios multcomp mvtnorm]; }; SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.7.0"; sha256="10snjwrh95407iracbc52b5cvr3sp2539rrjp7fw63q50pjl285v"; depends=[evd]; }; @@ -4179,13 +4250,13 @@ in with self; { SimDissolution = derive2 { name="SimDissolution"; version="0.1.0"; sha256="1rdsxykh740h22ln635m0ysm00pdw94vp7qhgify4mcvc46c3632"; depends=[alabama dplyr mvtnorm]; }; SimEUCartelLaw = derive2 { name="SimEUCartelLaw"; version="1.0.1"; sha256="1wg9sayk55mp3f2qykvfk0cbqh050vh0n1fhpq4fmlxqll87aml9"; depends=[plot3D plot3Drgl rgl]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; - SimInf = derive2 { name="SimInf"; version="6.3.0"; sha256="013qb7irn2gjhylmlp9h6c5knq22lkkjr16pyj65dil6wywh58gf"; depends=[Matrix]; }; + SimInf = derive2 { name="SimInf"; version="6.4.0"; sha256="0nq20amk41xs4dpxxrllrxnnb8wqf5sshbvgdlm93y7dhamlv8x3"; depends=[Matrix]; }; SimJoint = derive2 { name="SimJoint"; version="0.2.2"; sha256="1b88iv64hhil96cyfc3925askf7vfkr609x1qwwcw6pqi8bw1q4y"; depends=[Rcpp RcppArmadillo RcppParallel]; }; SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.2"; sha256="0brszbqxf40y65xp96c5hp7hhvz3gv0xlg93r5ik8qdh0bn0y1sw"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; }; SimPhe = derive2 { name="SimPhe"; version="0.2.0"; sha256="01kzypahw41jk8s2c92h0k9w32yaicis07wb6k8qlqcmv0zj8xry"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.3.0"; sha256="1ppms2cirdhm8lsfl74mfc1f9zwc7lin6r5xs649czqlj63yzk4i"; depends=[dplyr kinship2]; }; - SimRVSequences = derive2 { name="SimRVSequences"; version="0.1.3"; sha256="0cz4kdl9bc1lc8y1vqyc3ppnviapid36ykvdqxmrwilijpd4d2b3"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; + SimRVSequences = derive2 { name="SimRVSequences"; version="0.2.0"; sha256="01rxbncywbqmx4sww67f772lpd6ws0hjcqv3mhnpkiqbsmhrqy64"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimRepeat = derive2 { name="SimRepeat"; version="0.1.0"; sha256="1vq82wlnas0jkl8hlj7dnnbn4y1a56lmszs4w7wya7acri92gkqm"; depends=[BB ggplot2 MASS Matrix nleqslv SimCorrMix SimMultiCorrData triangle VGAM]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; @@ -4212,7 +4283,7 @@ in with self; { Sleuth2 = derive2 { name="Sleuth2"; version="2.0-5"; sha256="18rp23dr55p2zqxqj5i86gi8j25b0y7hc2p88rxqszgmbyn5ynhi"; depends=[]; }; Sleuth3 = derive2 { name="Sleuth3"; version="1.0-3"; sha256="0ngwri80cwqs50wjza8qyzzwign4ag1ck7fa1x7q5x08w9x6w08m"; depends=[]; }; SmCCNet = derive2 { name="SmCCNet"; version="0.99.0"; sha256="0ixvh1pd1gzbscwg4xjlcgxq5c9vqahil0fysfjc3fnba3wiidzx"; depends=[igraph Matrix pbapply PMA]; }; - SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.3.0"; sha256="1cy5vbsb7a62hf8rarq5fmkqn23cf2jvsbl0hcwd68h37b8sparp"; depends=[Matrix SSBtools]; }; + SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.4.0"; sha256="0rx47hvm4wkmrj1hrwaa8j61y3agfb09n048j9xlda5rismaqk8z"; depends=[Matrix SSBtools]; }; SmartEDA = derive2 { name="SmartEDA"; version="0.3.2"; sha256="153bh9igdiq93ydibmfj9xklc5qj66zsakgkynk0apnczzzipn3y"; depends=[data_table GGally ggplot2 gridExtra ISLR rmarkdown sampling scales]; }; SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; @@ -4239,18 +4310,18 @@ in with self; { SongEvo = derive2 { name="SongEvo"; version="1.0.0"; sha256="0mc5wlf5axbflys6g8b7xg0di3wwkli7q0a9fby6598fq9hbaqpd"; depends=[boot geosphere lattice sp]; }; SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; }; SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; - SortedEffects = derive2 { name="SortedEffects"; version="1.0.0"; sha256="1zjzkp640y5nrn89d7si9fb46gawizkddywj3d7dhnvff7x2ay77"; depends=[boot Hmisc quantreg rlist SparseM]; }; + SortedEffects = derive2 { name="SortedEffects"; version="1.1.0"; sha256="14ddalkbk2bfjxpx3ppcm9ffdqxfi1d44nngbczi8923s9v2y1nc"; depends=[boot dummies Hmisc pbapply quantreg rlist SparseM]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; - SourceSet = derive2 { name="SourceSet"; version="0.1.1"; sha256="1326p28mngvi77b98n62cg6rln1qscyxz0616h7apc23ppdl7ybz"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; + SourceSet = derive2 { name="SourceSet"; version="0.1.3"; sha256="159kg4pna24yihkghxc2k5f56dqk8aypxcmj1whgnajmgab29ry1"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; SoyNAM = derive2 { name="SoyNAM"; version="1.6"; sha256="1vwl2mknk6x0sgk0baxsvb6xy4i7mf2ypkmc9lx869nakrx1ypah"; depends=[lme4 NAM reshape2]; }; - SpATS = derive2 { name="SpATS"; version="1.0-9"; sha256="1q49n4snvrfhw0774q83vjxrip5la28jmbl3vijhf15ycbq0kwrf"; depends=[data_table fields plot3Drgl spam]; }; + SpATS = derive2 { name="SpATS"; version="1.0-10"; sha256="0h1xf01kar69nr96vf1y19rd543fzysv391z992mqrr98dzws9dc"; depends=[data_table fields plot3Drgl spam]; }; SpNMF = derive2 { name="SpNMF"; version="0.1.1"; sha256="1xybxx47i3ww5d7chwl38xc48fbsclgyxcki8h85c6dkm49dxy8i"; depends=[NMF]; }; SpNetPrep = derive2 { name="SpNetPrep"; version="1.1"; sha256="1y3j7mwjxv69lrgqvi8kxvhlmdyr8v7gbg17741008xb32kgma8h"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; SpaDES = derive2 { name="SpaDES"; version="2.0.4"; sha256="1ihxkr2c7rfpb02chmdv393nfc1id1cg7lq8pbb64xm5vdpyj0bv"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.2"; sha256="0z1n48kfwy460zfam88ayfiq8sbzvnf6cpkasr74nykr4fabs5ha"; depends=[devtools magrittr miniUI reproducible rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="0.2.6"; sha256="0mqr76qxw0c87ansq4v7v9cb41cgph8sw3lfgv13f3l7mc34kvm6"; depends=[backports codetools crayon data_table DEoptim DiagrammeR dplyr fastdigest fpCompare httr igraph lubridate quickPlot R_utils raster RCurl reproducible stringi]; }; - SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.2"; sha256="0sda1r7vzfzhpk08dvix4lgz1i40dhqqrb7m917nvjd7i8q6jq7b"; depends=[bit checkmate CircStats data_table fastmatch ff ffbase fpCompare magrittr quickPlot raster Rcpp reproducible rgeos sp]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="0.2.7"; sha256="0m2yn907p884xq6da75ji87r5p3zzygkwxa50isz8lgnp31xmgpy"; depends=[backports codetools crayon data_table DiagrammeR dplyr fastdigest fpCompare future httr igraph lubridate quickPlot R_utils raster RCurl reproducible stringi whisker]; }; + SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.3"; sha256="0rly10mfk8r2c6a7p8372aagsiv2dk9s2apqvdvcj7frcac3jz3y"; depends=[backports bit checkmate CircStats data_table fastmatch ff ffbase fpCompare magrittr quickPlot raster Rcpp reproducible rgeos sp]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; SparkR = derive2 { name="SparkR"; version="2.4.4"; sha256="181qys7whk061bk8gl8ah34g4wk3a0lw40dnx18nj8yf5iq6yvzd"; depends=[]; }; @@ -4261,7 +4332,7 @@ in with self; { SparseLPM = derive2 { name="SparseLPM"; version="1.0"; sha256="1mpjf7yk2haa8hch315davb6nrhxhy0w2vgw2x4111rn4bskhd8m"; depends=[gtools Rcpp RcppArmadillo vegan]; }; SparseM = derive2 { name="SparseM"; version="1.77"; sha256="0p6ljma2h12cq1xmy0cxb48ih8dhxxbnwkqzvx3cckxf2kprycm9"; depends=[]; }; SparseMDC = derive2 { name="SparseMDC"; version="0.99.5"; sha256="0d3ashk3l9fjdbiyjhaxc05ayyscissrg7lwhnh46hv3fydbixlj"; depends=[doParallel doRNG foreach]; }; - SparseMSE = derive2 { name="SparseMSE"; version="1.2.1"; sha256="1dppb588bqq5s9dg86bfbml65j0k8vbcj8r85ch5dc95q2bxa2li"; depends=[lpSolve]; }; + SparseMSE = derive2 { name="SparseMSE"; version="2.0.0"; sha256="0i58lq4kqb9gdhd1r3v7czjaz76y9gyf0avf37m9z12sw8kwmdac"; depends=[lpSolve Rcapture]; }; SparseTSCGM = derive2 { name="SparseTSCGM"; version="2.5"; sha256="004hbk5fdd5b5hdvg25wl1908pfya26brm2pz00zypfvis99lps3"; depends=[abind flare glasso longitudinal MASS mvtnorm network QUIC]; }; SpatEntropy = derive2 { name="SpatEntropy"; version="0.1.0"; sha256="0nk399anjhsdki9cra650ynk6sa0366495470sawxcfs3vxmlzrl"; depends=[spatstat]; }; SpatMCA = derive2 { name="SpatMCA"; version="1.0.1.0"; sha256="1sjrm1md4lmhyq1yw3np4llkgdskw3mk667jr0k3isjmr6z88gxa"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; @@ -4274,7 +4345,7 @@ in with self; { SpatialFloor = derive2 { name="SpatialFloor"; version="1.1.0"; sha256="07mwgcvkkq478l6wxvrdjs9d578x0kgs5xy86lgy5my0xqfcv6y8"; depends=[blocksdesign fields reshape2 taRifx]; }; SpatialGraph = derive2 { name="SpatialGraph"; version="1.0-2"; sha256="0cwswa5g3a6ng8qkwi04jz9pma4i0c16m7jpq6z3djzjin0znyk2"; depends=[igraph rgeos shape sp splancs]; }; SpatialML = derive2 { name="SpatialML"; version="0.1.3"; sha256="0akip0kkd1jjid12iwmaxkhkvcfzkxmrnrsv0b6nnvpjdl1jb589"; depends=[randomForest]; }; - SpatialNP = derive2 { name="SpatialNP"; version="1.1-3"; sha256="1azymigqychsydqvy2n5fplv971i1gzxfhfnclm5r5rqh0xcdp3k"; depends=[]; }; + SpatialNP = derive2 { name="SpatialNP"; version="1.1-4"; sha256="1hj9fjhyxcvl2d0wdqyc899wy4f6iyi03g65icavkmqnwcs8c7hc"; depends=[]; }; SpatialPack = derive2 { name="SpatialPack"; version="0.3-8"; sha256="0laixlr37048x2dr1zbk41kjp533w47khc1d9rihmlrwxrflprd0"; depends=[]; }; SpatialPosition = derive2 { name="SpatialPosition"; version="2.0.0"; sha256="00z1kbkd7as4xnzqnizaap9qga4vakx7swyayli26ghp11krgfwr"; depends=[isoband lwgeom raster rgeos sf sp]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.4"; sha256="0jgbrzsx2klvihv65y1ycqyr8awp5kqqz4qwfyfibx3b56lzna1q"; depends=[Rcpp RcppArmadillo spBayes]; }; @@ -4287,7 +4358,7 @@ in with self; { SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; }; SpecsVerification = derive2 { name="SpecsVerification"; version="0.5-2"; sha256="0dnya9mzkf48clp51jrnkz6lc4fps38nn3lap7n2wcp3dvbvdycg"; depends=[Rcpp RcppArmadillo]; }; SpectralMap = derive2 { name="SpectralMap"; version="1.0"; sha256="15689023k9jzg3s7bx5m97dmn00z876amqhxsxksy8n8wf09wr57"; depends=[fields scatterplot3d]; }; - Spectrum = derive2 { name="Spectrum"; version="0.8"; sha256="0q6aqmvr4lkswb1q2hch4mmzhy384kha61mhjp6y8ss13h7lhp9d"; depends=[ClusterR diptest ggplot2 RColorBrewer Rfast Rtsne umap]; }; + Spectrum = derive2 { name="Spectrum"; version="0.9"; sha256="1n7jw8l1jidrsma5sdv7sdb1g29i0ianyrzclrxx49i0md2wnx5g"; depends=[ClusterR diptest ggplot2 RColorBrewer Rfast Rtsne umap]; }; SphericalCubature = derive2 { name="SphericalCubature"; version="1.4"; sha256="14xrxhmhavz82rcixnyharnbrvdzs6rh7gbxihaxh431d90w2q3k"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; SplitReg = derive2 { name="SplitReg"; version="1.0.0"; sha256="09ni4hqyr3ng1yvb2g4wyl8vm1sa05rv649g0c9bfq6m6cx7xdvy"; depends=[Rcpp RcppArmadillo]; }; @@ -4316,17 +4387,17 @@ in with self; { SteinerNet = derive2 { name="SteinerNet"; version="3.0.1"; sha256="1jkvv0hsj85i1zfr1bmdsrbwgl11mxpfci3z7997m5vvb5fb5cxn"; depends=[igraph]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StempCens = derive2 { name="StempCens"; version="0.1.0"; sha256="11gspjrcl6yiyr19hankan5mcxipfsdkhha6nsiybs1chg5wx6f4"; depends=[distances ggplot2 gridExtra Matrix MCMCglmm mvtnorm optimx sp spTimer ssym tmvtnorm]; }; - StepReg = derive2 { name="StepReg"; version="1.2.1"; sha256="166g47jqbxqxdgr0654vhmlgpcdcsly5wy35myx0fs0dsaqxzfkd"; depends=[Rcpp RcppEigen]; }; + StepReg = derive2 { name="StepReg"; version="1.3.3"; sha256="1l2m65dlq59dh8jx1czc17j44pgqihcx37bfdp6x61nvdhf5sw40"; depends=[Rcpp RcppEigen]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.6.0"; sha256="0j85lvs2bljfhf482r31sq3xgk8l73hcw22wgxxp8z8nla38cwf9"; depends=[Rcpp]; }; StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; - StereoMorph = derive2 { name="StereoMorph"; version="1.6.2"; sha256="1jjvkwln9kkjgyg1vn9ma6ffi32cxbkfh6zn69vilbdkmjcsycl2"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; + StereoMorph = derive2 { name="StereoMorph"; version="1.6.3"; sha256="0sr8i6hq9iir2f717yvm5kdda047hamsqcrl553jjzzcbxg0y5m1"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; StockChina = derive2 { name="StockChina"; version="0.3.1"; sha256="1myxyfchnkskyqb5yciw1wfk3006f51y89ipzfjzdlfyzwy1lsp1"; depends=[]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; }; StratSel = derive2 { name="StratSel"; version="1.3"; sha256="0hd6q8s8aiymcd33kv0gd0a4wzr86xxdzwn18jgpyk9q8pmg8gvl"; depends=[Formula MASS memisc mnormt pbivnorm]; }; Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; }; StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.3.0"; sha256="0pklnm0q0imdhyzhwyb4i0j441dkk4k6qqlx8d4q2xnl62drqnvv"; depends=[bnlearn plyr]; }; - StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="0.1.3"; sha256="1sh4hy0jyqlszmq3rhgx08d2sr0ri5zbs75gmddv96d45150yan8"; depends=[dplyr ggplot2 glmnet mvtnorm partykit ranger survival]; }; + StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="0.2.0"; sha256="1fxw0ih68ny04342gymihl2zir34rflq9kpvg72czfpp2j8aqhy3"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; }; StratigrapheR = derive2 { name="StratigrapheR"; version="0.0.6"; sha256="1383gnxfsczvpazkhdq0fpv0x41jq47ksxam29yq19m2gh4afswc"; depends=[diagram dplyr GGally ggplot2 shiny stringr XML]; }; StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; @@ -4336,12 +4407,13 @@ in with self; { StructFDR = derive2 { name="StructFDR"; version="1.3"; sha256="1y0wj7y36iq0lznc4qpsr2yis3an34iilpabkaxxmas2q4abg0qb"; depends=[ape cluster dirmult matrixStats nlme]; }; StructureMC = derive2 { name="StructureMC"; version="1.0"; sha256="1pj3inznw6flvmk22dzjcfjnwjhx7r98ngckz0axf6ipp3hb85jn"; depends=[MASS matrixcalc]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; - SubTite = derive2 { name="SubTite"; version="2.0.3"; sha256="1i95f3x1nkhx9kqzxwvi15x6yq7mcdihzjxh60la6jvq5nscfi3l"; depends=[Rcpp RcppArmadillo]; }; + SubTite = derive2 { name="SubTite"; version="3.0.0"; sha256="1kv5083zfxla4v1y7zhkd2rhld8mhmnilkz78q26qp121qqbf93r"; depends=[Rcpp RcppArmadillo]; }; SubVis = derive2 { name="SubVis"; version="2.0.2"; sha256="1nb3zgm6i5lwfwdrn8mk3wkg8a4ldfvs27ai8v46l4316qc1fa9p"; depends=[Biostrings shiny]; }; SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.0"; sha256="0bhrb82yck4q72r268wqcnz2cm0sss92zff580s5jjijc2cwh3cp"; depends=[alluvial circlize colorspace diagram dplyr geoR ggplot2 gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; SubgrpID = derive2 { name="SubgrpID"; version="0.11"; sha256="1by23gdkbls7l5xa9nl055nbm0d3138pmfmasqmcy42h62wf7dw6"; depends=[AIM ggplot2 glmnet Matrix rpart survival]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; + SummaryLasso = derive2 { name="SummaryLasso"; version="1.2.1"; sha256="1gb1g1xgda5psq93vy50yfr0cbhvymliblpkxz7ck1nwpp65n9py"; depends=[gtools]; }; Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; }; Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; }; SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; @@ -4354,7 +4426,7 @@ in with self; { SuperpixelImageSegmentation = derive2 { name="SuperpixelImageSegmentation"; version="1.0.1"; sha256="15d611ik6qg0602n6yk34a1pgfciv42nzd8qaarmxnqqrn8i584n"; depends=[ClusterR OpenImageR R6 Rcpp RcppArmadillo]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; }; SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="1.0.1"; sha256="0q0swp0xs3lmfx2dxffqrna2spyr2l9ka0zbhmw8nkgb1w5rq5q6"; depends=[gstat raster rgeos sp]; }; - Surrogate = derive2 { name="Surrogate"; version="1.3"; sha256="02jy85lvdfpixmpsffpjfv1iadgv6skw5qhzqw11bm0aqk6jqi37"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms rootSolve survival]; }; + Surrogate = derive2 { name="Surrogate"; version="1.4"; sha256="184c34ks6q8qdv7kgl3z7p71a8qbfkazg60wglk2q7f1aqfaahgb"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms rootSolve survival]; }; SurrogateOutcome = derive2 { name="SurrogateOutcome"; version="1.0"; sha256="0x91bmr4n9zn9cc72s91fzzsqhzhrkfpcbcla00gcsfmbjqz3997"; depends=[survival]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.1"; sha256="0m6m44vsfdgv47sswi2s8snmypa7s2ppad73fqnvymq8fm2b3yl2"; depends=[survival]; }; SurvBoost = derive2 { name="SurvBoost"; version="0.1.2"; sha256="17av00iwa3kpw0ihrvvynrfcghnq492b5k7n9fxfgf2nily24x2p"; depends=[directlabels ggplot2 mvtnorm plyr Rcpp RcppArmadillo RcppParallel reshape2 survival]; }; @@ -4367,6 +4439,7 @@ in with self; { Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-5"; sha256="0nmlnvc1vxk68sc5jv3kvnnf5dpqxn4dxzrn06b9sn2bcxfpmkhy"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; + SwimmeR = derive2 { name="SwimmeR"; version="0.1.0.0"; sha256="0979527aaacfq8arp1qh7z3p9crq8x2v90899z2ab0fa6f9n282m"; depends=[dplyr purrr stringr tibble]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.5"; sha256="0lh69924vhyilgn562jqn8m7z4dq3xmdj09501sbs7hbxfaiiyly"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; }; @@ -4379,18 +4452,18 @@ in with self; { T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; TAG = derive2 { name="TAG"; version="0.1.0"; sha256="1ha29kxd767g47qi93sb0p3mwdzvbf1hwa0s2lq3c938hfa3pg6v"; depends=[DiceKriging doParallel FastGP Matrix mgcv mlegp randtoolbox Rcpp RcppArmadillo]; }; TAM = derive2 { name="TAM"; version="3.3-10"; sha256="1rkjp5x6wrk1dfspp1imvfals0wvy4w1wb8a5mhfbnilc7vgnlbq"; depends=[CDM Rcpp RcppArmadillo]; }; - TANDEM = derive2 { name="TANDEM"; version="1.0.2"; sha256="1h6m6aq2b5m9gdy4nck4dxv75gv50pfdhxx8xifgyv0d7n8czabq"; depends=[glmnet Matrix]; }; + TANDEM = derive2 { name="TANDEM"; version="1.0.3"; sha256="151rm95q2naw9y58df1lr2qiadnkgfb5j9v47v41bw4iipsmlp4p"; depends=[glmnet Matrix]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2018.5-1"; sha256="0bf0sgqa53l9y2bhwg2ngiwlcgrmj0nvxchlsmcc8zin388qf4pb"; depends=[Rcpp]; }; TAR = derive2 { name="TAR"; version="1.0"; sha256="0wjh2n9x3yn9by9a6mjvkl96qy7z549g6dsqp7b4d96xwmyqxlbv"; depends=[mvtnorm]; }; TAShiny = derive2 { name="TAShiny"; version="0.1.0"; sha256="1h8k8py7myrj7c18cbp4q7bmgmck64jagw9s9j1jaqzl9qf8cbgq"; depends=[dplyr igraph shiny SnowballC tm wordcloud2]; }; TBEST = derive2 { name="TBEST"; version="5.0"; sha256="15piy507vv8x59xgga17splxszy0vm87qjbfgxycvba633jishsa"; depends=[fdrtool signal]; }; TBFmultinomial = derive2 { name="TBFmultinomial"; version="0.1.3"; sha256="0cd0dr8vkf0sfriaafp2x63dilxmirm0fljxm82zw77c9j5ly3kv"; depends=[nnet plotrix stringr VGAM]; }; TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; - TCA = derive2 { name="TCA"; version="1.0.0"; sha256="1wjzw126qlv1sf6panrm763vvm4ahrz1gscxbalg2bxd2879j1xc"; depends=[config data_table futile_logger gmodels Matrix matrixcalc matrixStats nloptr pbapply pracma quadprog rsvd]; }; + TCA = derive2 { name="TCA"; version="1.1.0"; sha256="0pj052kd378x1gmg5wcbk8c0dca3c2ra65hnagljmsplv169vimy"; depends=[config data_table futile_logger glmnet gmodels Matrix matrixcalc matrixStats nloptr pbapply pracma quadprog rsvd]; }; TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; }; TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; }; TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.6"; sha256="15f3w6vhbqy4xzidxasjnqigxchd3jbr2kpm3gggjnkp7rzsfgaf"; depends=[httr jsonlite]; }; - TDA = derive2 { name="TDA"; version="1.6.5"; sha256="1048b3wh03pvgdplgzqbj9lcc7r4j67zvmizkxmp0gpm216b57nq"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; + TDA = derive2 { name="TDA"; version="1.6.9"; sha256="023jwhh1qc2y30g42pgfaha4n4pixzwrrghxlyss4889fr66q9vw"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDAstats = derive2 { name="TDAstats"; version="0.4.0"; sha256="091fx0qla7jr5h7a84rp5mdsrafzdk87gk5xdflf62dk7qghb9kr"; depends=[ggplot2 Rcpp]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; @@ -4435,7 +4508,7 @@ in with self; { TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; TRAMPR = derive2 { name="TRAMPR"; version="1.0-8"; sha256="0nxp8wdr7yx94fk14m0r4dh2jxcvjqp6lg02092zww5y7jlbf4ds"; depends=[]; }; TRD = derive2 { name="TRD"; version="1.1"; sha256="0bhn4bcrq39f5dgqc74jqsfhs1iqfxhawacqqyncbk2372013nqp"; depends=[Rlab]; }; - TRES = derive2 { name="TRES"; version="0.1.0"; sha256="0vlf0z4za2l4cllvl35cck2xgh2gfna2c3w92szw73vi4q0kflqn"; depends=[ManifoldOptim MASS mvtnorm pracma rTensor]; }; + TRES = derive2 { name="TRES"; version="1.1.0"; sha256="0brj8wszgf9fkqfa3v0qg5wg9wi1b8k2ddixv3p29cdb57gsacdw"; depends=[ManifoldOptim MASS pracma rTensor]; }; TROM = derive2 { name="TROM"; version="1.3"; sha256="1glbpbq8qhlxhcscgsqivmncsmadfhlsin47r9jxxd2s087cdh2f"; depends=[AnnotationDbi GO_db gplots gtools lattice openxlsx RColorBrewer topGO]; }; TRSbook = derive2 { name="TRSbook"; version="1.0.2"; sha256="0lj20i6gybinc196nzjfi6ayzmm970s9vp43lj60v96g5dl7qv1b"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; TSA = derive2 { name="TSA"; version="1.2"; sha256="0gjfqibwdznz0nka95k4fjm935svxjpnqfywwz403crn2lh30h6q"; depends=[leaps locfit mgcv]; }; @@ -4478,8 +4551,8 @@ in with self; { TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; TSsmoothing = derive2 { name="TSsmoothing"; version="0.1.0"; sha256="1m4y6hfw5ghqmvbnha05w6k0abbr08xdcahmh897g68b06vcrjsl"; depends=[ggplot2 gridExtra MASS Matrix]; }; TSsql = derive2 { name="TSsql"; version="2017.4-1"; sha256="0f71q6gqfx4r3ghsmr572cvkpmf2xf7kipf10ii99z1y23dxmsdn"; depends=[DBI tframe tframePlus TSdbi zoo]; }; - TSstudio = derive2 { name="TSstudio"; version="0.1.4"; sha256="0cc59f7zw5plyj35svh6vr3id0j8c8ywihz5ms9c1gpfiq101a9w"; depends=[bsts data_table dplyr forecast forecastHybrid future future_apply lubridate magrittr plotly purrr RColorBrewer reshape2 scales tidyr viridis xts zoo]; }; - TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.4"; sha256="0r79qbmn4z9v4f4g737xs3mhc4dp6s6llkcz6c3hihwnq1vrvd7h"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape rkt tcltk2 zoo]; }; + TSstudio = derive2 { name="TSstudio"; version="0.1.5"; sha256="0xyvh5brfqmkhv1d65m1i5hy4b9pg08ax0nw3nbfc1qqnp4zg1jb"; depends=[bsts data_table dplyr forecast forecastHybrid future future_apply lubridate magrittr plotly purrr RColorBrewer reshape2 scales tidyr tsibble viridis xts zoo]; }; + TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.5"; sha256="1l2sc4mphk440jxc9sgryqcqr9kwh00fdizswrsria25fbg0nzl4"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape rkt tcltk2 zoo]; }; TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; }; TTR = derive2 { name="TTR"; version="0.23-5"; sha256="0fxipnyxaz55n4camrk9cs71x9w4dsmjrihysv8i1s6khf825rg6"; depends=[curl xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; @@ -4488,6 +4561,7 @@ in with self; { TUWmodel = derive2 { name="TUWmodel"; version="1.0-2"; sha256="1b07isi7s22q65h9yabrz515nr4vxp2ynpl37l2lsf4mcpjjzg4x"; depends=[]; }; TVsMiss = derive2 { name="TVsMiss"; version="0.1.1"; sha256="1lvswq3syp2mfcf0higmyg5k5qhg1q6jaz8g75az3xajn4jylm0k"; depends=[glmnet Rcpp]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; + TableHC = derive2 { name="TableHC"; version="0.1.1"; sha256="16iv93ia0whx1wgq817zd1nrxfwm4d6dkw28q22vdpbppr35ccaz"; depends=[]; }; TableMonster = derive2 { name="TableMonster"; version="1.7"; sha256="1xa4bkcpzhm50dwbpya346swjjfw46n2x26xm30p8gppilg5c0lb"; depends=[xtable]; }; TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.2"; sha256="034vca0il7006zdkh5vdfjddyq9lg5mkl8hjria2rpks6wx0jhrd"; depends=[]; }; TailRank = derive2 { name="TailRank"; version="3.2.1"; sha256="142m0cq9j8y5g9wh4plxya1jqi0dv6p6praxx3jb84kwqspi91xr"; depends=[Biobase oompaBase oompaData]; }; @@ -4499,14 +4573,14 @@ in with self; { TauP_R = derive2 { name="TauP.R"; version="1.5"; sha256="02vk9rj8yx4n2pihgk93bs2f9wkpkyfqm2kp7ixj4wpa29a0iq6v"; depends=[]; }; TauStar = derive2 { name="TauStar"; version="1.1.4"; sha256="06bb6570mqzfbjw2qp4bjl4a1bdpwsvcr0vw2y4l1x444m670ds1"; depends=[Rcpp RcppArmadillo]; }; TaxicabCA = derive2 { name="TaxicabCA"; version="0.1.0"; sha256="0mkw7d2pksj98kyg2951achmvsr0x7f4snq0kk1s5158b5yi5npn"; depends=[]; }; - Taxonstand = derive2 { name="Taxonstand"; version="2.1"; sha256="0dvhiqggbv1by284fg38rcvvrxr9q3zp5gh51p1dh0129h73qj7i"; depends=[pbapply]; }; + Taxonstand = derive2 { name="Taxonstand"; version="2.2"; sha256="1cpx5mp17l9gjvb60f0ypm8r8b69ff520p67jac8y6rvw8aqhc6j"; depends=[pbapply]; }; TcGSA = derive2 { name="TcGSA"; version="0.12.4"; sha256="1kqgmmrkwy5idr77r3grq76km6bvi2003a148kjmdmi688jjkc2g"; depends=[cluster cowplot ggplot2 gplots GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; TeXCheckR = derive2 { name="TeXCheckR"; version="0.6.0"; sha256="1qrzslcipg3j1317dhizxhcxyx2dpx7jh91vkms10wgc6vpqgrw4"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; TeachBayes = derive2 { name="TeachBayes"; version="1.0"; sha256="1mfhlkm7wp2i4hvc63xzfyw3q4z1xhlbi933pkqkbrhih94z4rz7"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; TeachNet = derive2 { name="TeachNet"; version="0.7.1"; sha256="12kkpr96mq0jr07k7ivcmwhrfgas1qrfqfhxa4gm7vv3vkjn0gs9"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; - TeachingSampling = derive2 { name="TeachingSampling"; version="3.4.2"; sha256="1r06if6ljlr9i3y5ri7akris97dsjy3n3n6sgz2dvy9szm4zsadp"; depends=[]; }; + TeachingSampling = derive2 { name="TeachingSampling"; version="3.6.0"; sha256="14afxdvcprnsp34zgmfz8c3kfac35bkm2lq73ga84xcklsiq3gaf"; depends=[]; }; Tejapi = derive2 { name="Tejapi"; version="1.0.1"; sha256="1v80yjbik6shqad2nvi374dpzs9bjv9ah26agy0khmwnbz6029rk"; depends=[httr jsonlite]; }; TempCont = derive2 { name="TempCont"; version="0.1.0"; sha256="1pl0czrpw74zfm5vycyl0h8hc3n5whf4g6a2759a22384gk5fq7k"; depends=[nlme]; }; TempleMetrics = derive2 { name="TempleMetrics"; version="1.2.0"; sha256="0g8a799grsjqyq55pnlgixyq2qxhvl5k01jcjwc08q54w2dg0xf0"; depends=[BMisc pbapply]; }; @@ -4514,8 +4588,8 @@ in with self; { Ternary = derive2 { name="Ternary"; version="1.1.2"; sha256="0zbvgvs81ciz6qwxmmniylz5b4ci9r9zsa86b4fr36by27mafs6w"; depends=[viridisLite]; }; TestCor = derive2 { name="TestCor"; version="0.0.1.0"; sha256="0jqx74khjw8d3gvw5kn3yqfps877043d9wa6ffb33b5x7nfnj4hj"; depends=[MASS Rcpp]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.1"; sha256="10b1g9m2s6nbs8lrpcx3s1jf0fmqyd07mg3vx1pnma8r3vwy1yh7"; depends=[Amelia mice]; }; - TestDesign = derive2 { name="TestDesign"; version="0.2.5"; sha256="0a26c8qqxvv1g5id9cclg2h6xzpywf8dvn5v8s13dqr4z3001mnn"; depends=[crayon foreach logitnorm lpSolve Matrix Rcpp Rdpack]; }; - TestDimorph = derive2 { name="TestDimorph"; version="0.2.0"; sha256="1ckcfr4il1bcjcwvri35wj1bps4nxy1s959n40mx41211khj0rz1"; depends=[caret corrplot dplyr klaR MASS mda plyr purrr reshape2 Rfast rlang rowr stringr truncnorm]; }; + TestDesign = derive2 { name="TestDesign"; version="1.0.0"; sha256="0jl65fv5iafpnm3xbi1wf676qdyk329cqm6c9zw9gzzbwc7f2pb7"; depends=[crayon foreach logitnorm lpSolve Matrix Rcpp Rdpack]; }; + TestDimorph = derive2 { name="TestDimorph"; version="0.2.1"; sha256="1g98f19mxr4snjzbmxscx5lqcqkf3zgg4vgrcfly9pwf0qdn7ard"; depends=[caret corrplot dplyr klaR MASS mda plyr purrr reshape2 Rfast rlang rowr stringr truncnorm]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; TestingSimilarity = derive2 { name="TestingSimilarity"; version="1.1"; sha256="1iq0wh13rl6rby44ql4d286r1akzwmbpsvnq9p8lkl8709z0d34w"; depends=[alabama DoseFinding lattice]; }; @@ -4523,7 +4597,7 @@ in with self; { TextForecast = derive2 { name="TextForecast"; version="0.1.2"; sha256="0yj2m22imzllz07wx04nar2mfpyl06jiq0ya1nwgaq74kaiym42p"; depends=[doParallel dplyr forcats ggplot2 glmnet Matrix pdftools plyr pracma RColorBrewer tidyr tidytext tm udpipe wordcloud]; }; ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; }; ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; }; - Thermimage = derive2 { name="Thermimage"; version="3.2.1"; sha256="1550ri4qkm7yfv6bisy5pi1cic9mjbm842nl22bsyzj1631j1f8s"; depends=[png tiff]; }; + Thermimage = derive2 { name="Thermimage"; version="4.0.1"; sha256="021kjmy0ilg033gf9l46dqfsyd0625v21mcc3sj2smv2dipr8hwd"; depends=[png tiff]; }; Thinknum = derive2 { name="Thinknum"; version="1.3.0"; sha256="0j48vgr4wsc2chm95aprq0xm0dk720xk5zmiijxasg92sfp0va6n"; depends=[RCurl RJSONIO]; }; ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-3"; sha256="06jhgl1fzvkvnhrjs4xcyw6yymwl499rw9xnfwpx44dzxi7nynxj"; depends=[MASS numDeriv]; }; ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; @@ -4532,7 +4606,7 @@ in with self; { ThresholdROC = derive2 { name="ThresholdROC"; version="2.7"; sha256="1r2bmik02fcrja8gl885apc0skpyw5d69y8qqphq0s1nbjq81s0n"; depends=[MASS numDeriv pROC]; }; TickExec = derive2 { name="TickExec"; version="1.1"; sha256="0v0m0wi49yw0ply19vnirl2zwnk61sxalx24l8cadvkssgs13509"; depends=[]; }; TiddlyWikiR = derive2 { name="TiddlyWikiR"; version="1.0.1"; sha256="0vwwjdmfc8c0y2gfa8gls1mzvp29y39c9sxryrgpk253jj9px1kr"; depends=[]; }; - TideCurves = derive2 { name="TideCurves"; version="0.0.3"; sha256="0wll0zbkfas6hs4h8ma5km68nv2brw1k75ngw5lrnxilya22lrgp"; depends=[chron data_table fields]; }; + TideCurves = derive2 { name="TideCurves"; version="0.0.4"; sha256="1i5qm6wwm6m0xrmr6dvk3pn6apxxqw9hznv8vypzwnky7bizkl90"; depends=[chron data_table fields]; }; TideHarmonics = derive2 { name="TideHarmonics"; version="0.1-1"; sha256="1g1v99gh6mns4l8ipmw7kpalbk07m92ybcqjq7b0wsjmdvs1y67s"; depends=[]; }; TideTables = derive2 { name="TideTables"; version="0.0.2"; sha256="1grm9s9np7xs2d8gql4sgg72rxpxiidw6g1ni8q97qgqr7r3105l"; depends=[chron data_table]; }; Tides = derive2 { name="Tides"; version="2.1"; sha256="0da3z010ali83qf8mf1znicqv8vvsa5r93mc40ax60ln2w33nlrm"; depends=[]; }; @@ -4542,17 +4616,20 @@ in with self; { TimeVTree = derive2 { name="TimeVTree"; version="0.3.1"; sha256="124kg9zcq4b2j4qvg9f6gykbmzf69qjnnw54nv213ip2h4rdkv32"; depends=[survival]; }; TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; Tinflex = derive2 { name="Tinflex"; version="1.5"; sha256="15nbzr3q8rfrqywvlqi48r30fgq4lhlhp1fbnf12j49k6q2aixb1"; depends=[]; }; + TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.1-0"; sha256="07lw6jnr76qrxwrwv90hi5ih2xf6g4sz4hfapk5vf1y3ayfskkl0"; depends=[DescTools mclust TeachingDemos]; }; TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; }; Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; TmCalculator = derive2 { name="TmCalculator"; version="1.0.0"; sha256="067xcpik00r6cdb4q1z09dgdqacyxqg21xn9nzvqfnp6s3nw6a9s"; depends=[]; }; Tmisc = derive2 { name="Tmisc"; version="0.1.20"; sha256="0f57wc35d2x2149y1bjswy54247wrwpvc8p77q07k1y5i71hm65k"; depends=[dplyr rstudioapi tibble]; }; Tnseq = derive2 { name="Tnseq"; version="0.1.2"; sha256="1n76yzk15p8i5bp3k6fszmdqk2d791r4sb8hg5hb61zb92r7wqlj"; depends=[Biobase Ckmeans_1d_dp DESeq edgeR limma]; }; - TooManyCellsR = derive2 { name="TooManyCellsR"; version="0.1.0.0"; sha256="1r3wh9hhk6yx4swgjfdsh3094yl36ld7qn1285vsixd1rdqxng44"; depends=[cowplot ggplot2 imager jsonlite Matrix]; }; + TooManyCellsR = derive2 { name="TooManyCellsR"; version="0.1.1.0"; sha256="0cypjf4a9q2kw4gwxlr59nbwn25wrrhrcmpksxi2yhd3qhk71q8n"; depends=[cowplot ggplot2 imager jsonlite Matrix]; }; ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.2"; sha256="0x05phwm6gqw1pmars1ypg86sggflffw9g2d0lc5gfsy93nrg0rv"; depends=[calibrate HardyWeinberg MASS]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; }; TopicScore = derive2 { name="TopicScore"; version="0.0.1"; sha256="1x6s3yn25rj8mbd25yi7f2rz0nwg8n0l1vs6r250kyjb17d2javm"; depends=[combinat Matrix quadprog RSpectra slam]; }; TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.1"; sha256="0yc21vs10rzmwx0z6d0gyyncr25835vb7wpn392csc5big6d73xc"; depends=[memoise]; }; - TraMineR = derive2 { name="TraMineR"; version="2.0-12"; sha256="11bgksw8bps9s5kmp9kyfh3pdxbqiq1iq21jl1j7i4m62bgrwyhn"; depends=[boot cluster Hmisc RColorBrewer]; }; + TouRnament = derive2 { name="TouRnament"; version="0.2.5"; sha256="09i0frzzxi5ymjlvh81rmisxh35amrvhxbkjq5351fhlpf1n977z"; depends=[]; }; + ToxicoGx = derive2 { name="ToxicoGx"; version="0.0.1"; sha256="07xm12rkjsvf1jswad1rdl8rl0dj93d8pkcgyyal3xmzjhib78d9"; depends=[Biobase caTools CoreGx magicaxis RColorBrewer reshape2 scales SummarizedExperiment]; }; + TraMineR = derive2 { name="TraMineR"; version="2.0-13"; sha256="13b8dmb3a9m7cj5p1a0fpz28yaql55llf7wlc00acs2jwzs776k7"; depends=[boot cluster Hmisc RColorBrewer]; }; TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.6"; sha256="135s6aqkx18c364y9z0an0sbnwkgb2yrzxim3nd5khnbbnqdb5z2"; depends=[cluster RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.2"; sha256="1kpdiwwzxsdwv5255xlvcnxvnp39ky0aws41g1l5i7cpbv88kca5"; depends=[fields RColorBrewer]; }; Trading = derive2 { name="Trading"; version="1.2"; sha256="0wlwpf1iygcs0cy7ms57b1bbp8f3s193bvc6fcm31ih5ph8pr48i"; depends=[]; }; @@ -4592,8 +4669,8 @@ in with self; { UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; UBL = derive2 { name="UBL"; version="0.0.6"; sha256="0238irg7r3g248h4x4bdb308wvfqq99hwykywf4k2bssdd25kwjk"; depends=[automap gstat MBA randomForest sp]; }; UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; - UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="0.3.0"; sha256="17xh879jxaj668xxa31vj67mm74gj74wqs1lg32y6mshfbcss9fp"; depends=[dplyr DT ggplot2 ggpubr magrittr plotly RColorBrewer shiny shinyBS shinyjs shinythemes shinyWidgets tibble UCSCXenaTools zip]; }; - UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.2.6"; sha256="06czkc9y0hxgq7392acml9b0l58yqhc56nnrwxhbsbb536zb8bhn"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; + UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="0.4.0"; sha256="1m67ahh2k0mc8215nnb32r8nf9niax7y5nn3qpwg1fcav7g9ns66"; depends=[dplyr DT ggplot2 ggpubr magrittr plotly RColorBrewer shiny shinyBS shinyjs shinythemes shinyWidgets tibble UCSCXenaTools zip]; }; + UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.2.9"; sha256="10f3rll9sf9792r8lbnbgx93f657ijwapi0xcam8liwvjl5q1qm8"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; UKgrid = derive2 { name="UKgrid"; version="0.1.1"; sha256="1p2s49lj1b2nyp8m8mif8cfsgxli8ii649gix1hlyn73gzrm8mjj"; depends=[data_table dplyr lubridate magrittr rlang xts zoo]; }; UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; @@ -4613,13 +4690,13 @@ in with self; { Umatrix = derive2 { name="Umatrix"; version="3.1"; sha256="131j7yrb0yzffl6gvirdj29zmsbwg8163i15gg9f0clfcrl1kcx6"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png Rcpp reshape2 shiny shinyjs]; }; Umoments = derive2 { name="Umoments"; version="0.1.0"; sha256="0vgfvfb7ggi353scg4a2kbwagazn7qfyvi3mjn7c9cprcx0w0136"; depends=[]; }; Umpire = derive2 { name="Umpire"; version="1.3.7"; sha256="1yg1vrz36jgni7pkl4ch095ckcdx177j2w28zb7s8scjpvm20h3z"; depends=[]; }; - UncDecomp = derive2 { name="UncDecomp"; version="0.0.4"; sha256="1v29y64jm3axllwy0cgmyki6ii3ph2zyvcgbzv1pdrgxgj14qhck"; depends=[]; }; + UncDecomp = derive2 { name="UncDecomp"; version="1.0.1"; sha256="1m44pgk7nffay09m4gkwb0khq0qjd7bq1p72blsmib46wmnwqfsa"; depends=[dplyr ggplot2]; }; UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; }; UncertainInterval = derive2 { name="UncertainInterval"; version="0.5.0"; sha256="11vwf45bhgzzriwjjzjvbbwpzknbf6xl5s9ng7gxh58q20jy038j"; depends=[nloptr reshape2 rootSolve zoo]; }; UniDOE = derive2 { name="UniDOE"; version="1.0.2"; sha256="14jz4acrvbv59sbr7gya8g0z749vv0i04gl5wl0y4218byjvw6bs"; depends=[Rcpp]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; Unicode = derive2 { name="Unicode"; version="12.0.0-1"; sha256="1wpzj5jwmb9d9iz1xvgn8mc2xjri28g97k4lpafybb1v4xnxqk54"; depends=[]; }; - UniprotR = derive2 { name="UniprotR"; version="1.0.3"; sha256="0jscjc1xd8z3kxppf1b7gz77apqfr5jv185hk6q15fmd35qd1ibb"; depends=[data_tree ggplot2 httr magick magrittr plyr scales]; }; + UniprotR = derive2 { name="UniprotR"; version="1.2.2"; sha256="0d97ivbg87kpkvi2k9llagckr42qjyibzspi6a8sfzc5j8n0cqm6"; depends=[alakazam data_tree dplyr ggplot2 ggpubr gridExtra httr magick magrittr plyr scales tidyverse]; }; UnitCircle = derive2 { name="UnitCircle"; version="0.1.3"; sha256="0z5ssps8l5ka4aw4984qml15scw4pfssara5dls82afhfhpkszsr"; depends=[]; }; UnivRNG = derive2 { name="UnivRNG"; version="1.2"; sha256="0cx6bdzzypxnaqi4wkb20saqd5sfa2rga5cqh694l70vj9c3zw26"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.4.0"; sha256="007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"; depends=[ggplot2 gridExtra plyr scales]; }; @@ -4628,17 +4705,18 @@ in with self; { V8 = derive2 { name="V8"; version="2.3"; sha256="1cq5snck0hnjwchy92g5ysdabf70i5hjw3r3401sqv6nq5rdf87p"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; VARSEDIG = derive2 { name="VARSEDIG"; version="1.9"; sha256="18j73wm22bjvf2y0c09bfmdyx4x2gd0jhfcqhbk1sgsk24zjr63z"; depends=[]; }; + VARshrink = derive2 { name="VARshrink"; version="0.3.1"; sha256="09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl"; depends=[ars corpcor MASS mvtnorm strucchange vars]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VARtests = derive2 { name="VARtests"; version="2.0.5"; sha256="0gmm2qrrl4v5vx0nhiwq5brvanhybpb2q0zlf4dihramhjjbwyar"; depends=[Rcpp RcppArmadillo sn]; }; VBLPCM = derive2 { name="VBLPCM"; version="2.4.5"; sha256="1q5n87zzakdv0mflgsy6a5lc25ryjm7h90i3nr0dvccd0l8d4wpm"; depends=[ergm mclust network sna]; }; VBTree = derive2 { name="VBTree"; version="0.1.0"; sha256="0g0lyvclnfmd3zc8yhcibhli0hyxrba6wb3hx039fsg80q7y02h4"; depends=[tensorA]; }; - VCA = derive2 { name="VCA"; version="1.4.0"; sha256="076li3bd192lyg9hpcj391sg38jnr6mm8br550l31lqkz9f4nifn"; depends=[lme4 Matrix numDeriv]; }; + VCA = derive2 { name="VCA"; version="1.4.1"; sha256="0987c3xciijsnv57jfgdw0g0b9x97b1290bwzpa3j4ny42yrgndc"; depends=[lme4 Matrix numDeriv]; }; VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; }; VDJgermlines = derive2 { name="VDJgermlines"; version="0.1"; sha256="1aqjhkcj3bd5hk7iz0f2cy5nfp23gvhqsmg6nzlxd9klwc6xpq2h"; depends=[ape stringdist]; }; VDSPCalibration = derive2 { name="VDSPCalibration"; version="1.0"; sha256="1hrmmhvk3mhd3bdl0msnm5shcj4cjgd3pn1rkfkv8fh4llqvz7w8"; depends=[]; }; - VFP = derive2 { name="VFP"; version="1.0"; sha256="1gkpqxmxyv1hdaxk5yi3cd1k9q246q5gj9xhfnc87dp60rfg8p8f"; depends=[gnm MASS]; }; + VFP = derive2 { name="VFP"; version="1.1"; sha256="0ffx57a1nkdc9p39a946ga9rxpc48f9r7xprxahmmdwiqp5d9m54"; depends=[gnm MASS]; }; VFS = derive2 { name="VFS"; version="1.0.2"; sha256="1b8sl8id2gj4iqkpjzd3giybbix2jvskwsbw1kqj3zqr77hygxwg"; depends=[e1071 nleqslv]; }; - VGAM = derive2 { name="VGAM"; version="1.1-1"; sha256="0lnsqx3q3k0c7sj8gj0n6shn2fyxwrh8xph8h1r1i23ybbb2n6fy"; depends=[]; }; + VGAM = derive2 { name="VGAM"; version="1.1-2"; sha256="0kyan3a4ys2xbg9kf167cyf1gk7g963id62cjm2ij4i7y4wi61zq"; depends=[]; }; VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; }; VGAMextra = derive2 { name="VGAMextra"; version="0.0-1"; sha256="0rlj4q6ry6v3fnpmg4s33ynn7qzs5m98csap55nyn6r9ynrh5gk5"; depends=[VGAM]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; @@ -4652,14 +4730,15 @@ in with self; { VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-3-1"; sha256="0cwfpxcj8g68j9z9fl66i0amj8ypf199iv3yyxzsmniqv4w5x4ar"; depends=[MASS]; }; VNM = derive2 { name="VNM"; version="7.1"; sha256="19qglcibb7r6jjz0n0piklwfv3hi4jphd6vmyfbm0ccjjkmn5nin"; depends=[Rcpp]; }; - VOSONDash = derive2 { name="VOSONDash"; version="0.4.4"; sha256="0pkfsjfygbf8rvaahmxj1d36nk428rcjp5vf54cwm3qqcf44zm9y"; depends=[httpuv httr igraph lattice magrittr RColorBrewer rtweet shiny syuzhet tm vosonSML wordcloud]; }; + VOSONDash = derive2 { name="VOSONDash"; version="0.5.1"; sha256="1mg38fh7rrf1b2madk7lqqg0rmkh73hl20f920b4pdggqnrpmqq6"; depends=[httpuv httr igraph lattice magrittr RColorBrewer rtweet shiny syuzhet tm vosonSML wordcloud]; }; VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; VSURF = derive2 { name="VSURF"; version="1.1.0"; sha256="1azfd4sb89mp27l86k293qj81x94gfiy1ihwnb6c558p8h69xsgf"; depends=[doParallel foreach randomForest ranger Rborist rpart]; }; VTShiny = derive2 { name="VTShiny"; version="0.1.0"; sha256="1zq6irla3q7hqs8jpjdya7vy3frqrj72rwmd1sgxwrkgpmpxw6x7"; depends=[EnvStats rmarkdown shiny]; }; VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; - VWPre = derive2 { name="VWPre"; version="1.2.0"; sha256="1s9fc86gr8yf8h53sz8gg4dhm2vqxwpp42symsmy2xscrjavd7ph"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; + VWPre = derive2 { name="VWPre"; version="1.2.1"; sha256="05l3dlzryv68yk9za1vrbd4acn988s8ppkqj0i9kd88s8grjyj1d"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; + VancouvR = derive2 { name="VancouvR"; version="0.1.1"; sha256="1nzjdassan5kh7wk3xf6kry4jifgjn0gan61ibwhyzy1awpcfngv"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; VarBundle = derive2 { name="VarBundle"; version="0.3.0"; sha256="0jfx9gkb3f29lgc0nrz3xc7m2ham0scx9lay7x5a6ira7crga6cr"; depends=[crayon dplyr glue magrittr R6 stringr tibble]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarReg = derive2 { name="VarReg"; version="1.0.2"; sha256="04235hr0r6sp7r3ccvcfb8l6p8yapcdrn6zl7mmvbyc4qb70gawh"; depends=[sn survival]; }; @@ -4677,13 +4756,13 @@ in with self; { VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; }; VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.6"; sha256="1ccl4j3vb6aw1qfbqil67dy74daldajwzm7s5hqcidm73fd0wknc"; depends=[Rcpp]; }; VetResearchLMM = derive2 { name="VetResearchLMM"; version="1.0.0"; sha256="1a7wm04bsr5shak7l8ypxlhlnx3qkq1jdpjnji1n05p6b00ih9h1"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; - ViSiElse = derive2 { name="ViSiElse"; version="1.2.1"; sha256="14vv25wnqcplf7k0ybfdlcvyhnja0h0kvz39yzlh2qkavjvdaf2y"; depends=[chron colorspace Matrix stringr]; }; - VineCopula = derive2 { name="VineCopula"; version="2.2.0"; sha256="12p1bmp3b5vm0zfmwhbjj5gbmp0gf1ad7dcyzk6lda3zqkvfyfmi"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; + ViSiElse = derive2 { name="ViSiElse"; version="1.2.2"; sha256="1ay09dahlqnfrgf4gl4s45a4ahrk2xliagxqz5h826w2vzsawqcc"; depends=[chron colorspace ggplot2 Matrix reshape2 stringr]; }; + VineCopula = derive2 { name="VineCopula"; version="2.3.0"; sha256="0w9lpdb9mjia2vg9h4v418g8zw8xfq83hmih37hf3yp7p88vja1k"; depends=[ADGofTest lattice MASS mvtnorm]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; VoxR = derive2 { name="VoxR"; version="0.5.1"; sha256="07lsp6lrkq0gv55m84dl9w7gz5246d9avypqnkz96n3rbbgd0w5z"; depends=[]; }; W2CWM2C = derive2 { name="W2CWM2C"; version="2.0"; sha256="139rbbhshiap3iq4s4n84sip3cwwjn2x7lm7kmzwj5glhl5dc6ga"; depends=[colorspace wavemulcor waveslim]; }; W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; - WARN = derive2 { name="WARN"; version="1.2-3"; sha256="0vkp70cc3slz9y8qfybrqyjyglsxz9fnqrid735h2a113h4xvr3v"; depends=[MASS]; }; + WARN = derive2 { name="WARN"; version="1.2-4"; sha256="18gfk9vqcqarj7j5i240wqv2dclg3csng4mih5izj40xaaxaf6q5"; depends=[MASS]; }; WCE = derive2 { name="WCE"; version="1.0.2"; sha256="105pwpd9ikm0gwz4r12jl6cgs1riwsk9pn5qk9cn3msgwa0sdynx"; depends=[plyr survival]; }; WCM = derive2 { name="WCM"; version="0.2.1"; sha256="0d2yw6kzn7mvxwllxfbk6vfiy8l1fd7ggjgi92kjn0j0y66cadw4"; depends=[pracma raster]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; @@ -4691,36 +4770,38 @@ in with self; { WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; WGCNA = derive2 { name="WGCNA"; version="1.68"; sha256="1s7gy5vd7x67hpgli8r7ba2z99w3psiyv5hqmrh94zw141dg210a"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; WGScan = derive2 { name="WGScan"; version="0.1"; sha256="0jma6di9hbdimswdfm58568vahcjy46hbhb78idjsdz4bl9apvq3"; depends=[data_table MASS Matrix seqminer SKAT]; }; - WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; }; WLreg = derive2 { name="WLreg"; version="1.0.0"; sha256="0paghjcshhrr6y1gm98d6gr78zvgzhl678g9f96hppfa4q3lfpr7"; depends=[inline survival]; }; WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; }; WMDB = derive2 { name="WMDB"; version="1.0"; sha256="10wdjy3g2qg975yf1dhy09w9b8rs3w6iszhbzqx9igfqvi8isrr1"; depends=[]; }; WMWssp = derive2 { name="WMWssp"; version="0.4.0"; sha256="16m4hvjqdcpkvswvqwgm0pq9nm7vjrlqldzi4i69izlwccp37v47"; depends=[]; }; WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; + WR = derive2 { name="WR"; version="0.1.0"; sha256="00781l9rmfm8sqsmhqn59ihw3jsjphg8jnvk34bzh6aaxzdfybm9"; depends=[survival]; }; WRS2 = derive2 { name="WRS2"; version="1.0-0"; sha256="1ax7lchbg0f5miq5779p1zmk6pw36hvwwmbpvsfqwahl5wlvii0s"; depends=[MASS mc2d plyr reshape]; }; - WRSS = derive2 { name="WRSS"; version="2.3"; sha256="182753820fjwl544sv7rhkjsdy268r8fgspyq88brqlpfj7k6rdw"; depends=[GGally ggplot2 Hmisc network nloptr]; }; - WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.1"; sha256="0q2rdzbz3cbgr19sh9j3fqdn0lvwrq93qq2rjmnhx6ia9avkywa8"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="1.1.2"; sha256="1471fij60v0f9xn10zsnbd0m36x6c4ls2g9bfgpl2r9cmhliwix2"; depends=[cdata ggplot2 gridExtra mgcv sigr wrapr]; }; + WRSS = derive2 { name="WRSS"; version="3.0"; sha256="16a7i6glgl5cshsn3w7gxviybmka06ylw5znz94gigyx0vhgv97p"; depends=[GGally ggplot2 Hmisc network nloptr]; }; + WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.2"; sha256="1ssrqqf2hypif4nnfyl4lq03glyyg9ry9s14llf1njxamhjggfgg"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; + WVPlots = derive2 { name="WVPlots"; version="1.2.2"; sha256="0r8hsjx9d6qw7iih63gr5aj94dhvgmjxwz6ddx7qsa7vqy9hy7da"; depends=[cdata ggplot2 gridExtra mgcv rqdatatable rquery sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaMaSim = derive2 { name="WaMaSim"; version="1.0.0"; sha256="0sa7qd2bpn3sp06mlpissxxkfhg7j1d07nnwlnz7nyg7pivwnpan"; depends=[magrittr]; }; Watersheds = derive2 { name="Watersheds"; version="1.1"; sha256="1gn52nl0rr29pqq94gjasc4fi1kjxlrpjdkgm2x56j5jbd162drk"; depends=[lattice maptools rgeos sp splancs]; }; WaveLetLongMemory = derive2 { name="WaveLetLongMemory"; version="0.1.2"; sha256="1p9ld6w2qgbvkvp7xkzzd14v89rxcwl6vlr1zgxkpc5awl1ln1a8"; depends=[fracdiff wmtsa]; }; + WaveSampling = derive2 { name="WaveSampling"; version="0.1.0"; sha256="1xyi4aj2l9bjj6f2y11wl29rabhzmkdph1bd8jh8jwwf2p3502wh"; depends=[Matrix Rcpp RcppArmadillo]; }; WaveletANN = derive2 { name="WaveletANN"; version="0.1.0"; sha256="08qnx0lk2laiyx1q1wxj15j0yic65r7mbhr6lqbdllq30v4dcj88"; depends=[forecast fracdiff wavelets]; }; WaveletArima = derive2 { name="WaveletArima"; version="0.1.1"; sha256="19hz2q280m41qh3m9lx3i9p6p5fl6pw8r9b06xk6sn04hxbim8xx"; depends=[forecast fracdiff wavelets]; }; WaveletComp = derive2 { name="WaveletComp"; version="1.1"; sha256="07w2aa0jiflvxyqhgh48705hg8hjspd103jd00i2pcw2v42hwmf8"; depends=[]; }; + WaveletGARCH = derive2 { name="WaveletGARCH"; version="0.1.0"; sha256="1sgpwdhg7snm0in93ky7jv8lgynnxwlmpgznyj747j7jl9cxz5qn"; depends=[FinTS forecast fracdiff rugarch wavelets]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; WeMix = derive2 { name="WeMix"; version="3.1.1"; sha256="0hg7ib3spfd5fp71gfbrh234wxinv3xswyaxb4gzd8342qg2xxhk"; depends=[lme4 Matrix minqa NPflow numDeriv Rmpfr statmod]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.4.2"; sha256="0in0v19ns4ngnf89m4gxfpqqhnh2vp4h9cf8zcn8pgvr8nzd6f49"; depends=[apcluster doParallel doRNG dplyr foreach httr igraph jsonlite Rcpp readr rlang whisker]; }; WebPower = derive2 { name="WebPower"; version="0.5.2"; sha256="11255q41zai4q6n2mpk3fzhi2lyyr3g8dxqfajkb93f68m1b38jp"; depends=[lavaan lme4 MASS PearsonDS]; }; WeibullFit = derive2 { name="WeibullFit"; version="0.1.0"; sha256="1a80gcqbmvb1rz2dr2syy16wn6ixjn6l40gayys9zy8302hky9ir"; depends=[e1071 FAdist glue kSamples mixdist optimx R_methodsS3 R_oo sqldf xtable]; }; - WeibullR = derive2 { name="WeibullR"; version="1.0.10"; sha256="1h2w1rgap9yjns7cby0559jwzzwhzjq1h6lwsawrfnni7c36iliq"; depends=[Rcpp RcppArmadillo]; }; - WeightIt = derive2 { name="WeightIt"; version="0.6.0"; sha256="0x9k7n2fbcf78lnjnf6i8yr82mk0i6rrccf27b2yxv49a1ypwsgi"; depends=[ggplot2]; }; + WeibullR = derive2 { name="WeibullR"; version="1.0.12"; sha256="0rj4q9hd49b914lz8q1d8n96xrl0h29avn95aigb3z7f8knf7g9g"; depends=[Rcpp RcppArmadillo]; }; + WeightIt = derive2 { name="WeightIt"; version="0.7.1"; sha256="1wzazasnb24zpbsybb1jafzm3bdzmnk8nc09nflfiwwpmysfckax"; depends=[ggplot2]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.4"; sha256="05rmqhgfzh9fs4c1lhmrbk8s46ihaywy7n9qnivf7zcxxzxds0lj"; depends=[cluster RColorBrewer TraMineR]; }; WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; - WeightedROC = derive2 { name="WeightedROC"; version="2018.10.1"; sha256="1hdksd47pkky83g6hn6123f243yw3bzrlaibdgr2kd5kxn9rma3y"; depends=[]; }; + WeightedROC = derive2 { name="WeightedROC"; version="2019.11.12"; sha256="1zznzvd2nlxq3c5gr88f6midglavmk6368wfqdbg7bwvfxsccgbz"; depends=[]; }; WgtEff = derive2 { name="WgtEff"; version="0.1.2"; sha256="1z8pndv43ssgmzldwaq0088lmf1g2mkmrbmzyaismcpngn9fqxsk"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; }; WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.2"; sha256="0kzwglaazn820fzxd2g1fsiw2rnq0qxagns8b5mm3inflsgs35ng"; depends=[mgcv oro_nifti]; }; @@ -4756,6 +4837,7 @@ in with self; { Xmisc = derive2 { name="Xmisc"; version="0.2.1"; sha256="11gwlcyxhz1p50m68cnqrxmisdk99v8vrsbvyr7k67f0kvsznzs1"; depends=[]; }; Xplortext = derive2 { name="Xplortext"; version="1.2.1"; sha256="1c19i367vbcf8ikb364kz8488lcd5ignyagg9bhza282grhla7kn"; depends=[FactoMineR flashClust flexclust ggdendro ggplot2 gridExtra MASS slam stringi stringr tm]; }; YPInterimTesting = derive2 { name="YPInterimTesting"; version="1.0.3"; sha256="0fca963rsbs9k7ivffsqk4hzap6ll7s709kqs6aby0plghrdla2w"; depends=[MASS Rcpp]; }; + YPPE = derive2 { name="YPPE"; version="1.0.0"; sha256="04rqirwh2al67lvlva68cab9slic9nqgj27mbsb14rb5i6f8mcfw"; depends=[BH Formula Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; YPmodel = derive2 { name="YPmodel"; version="1.3"; sha256="1vll33nm7xynnbq15wksk9c38jhjfd6l1bbzijn5skqc5yik1r5x"; depends=[]; }; YRmisc = derive2 { name="YRmisc"; version="0.1.5"; sha256="0vdxw67j4sx3m713s2spvj7jlk9h2g9hg4169zabfah8ni7gdman"; depends=[ggplot2 gridExtra robust]; }; YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; @@ -4765,6 +4847,7 @@ in with self; { ZIBBSeqDiscovery = derive2 { name="ZIBBSeqDiscovery"; version="1.0"; sha256="12g9rga9z6318ni6x6q9hdqlgl93y2xn8vf3gc6sm97fz8pliswx"; depends=[mcc]; }; ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; ZIM = derive2 { name="ZIM"; version="1.1.0"; sha256="0scyfjn4ilsvha3x41c3b8bcfi31hlhwm77wn2a8hj5dsvnnmzig"; depends=[MASS]; }; + ZIPFA = derive2 { name="ZIPFA"; version="0.8.0"; sha256="0dx0v01sc769lqvkrk9fyhlifiif2xva20m2d9p341cgzp5875c6"; depends=[doParallel foreach Matrix optimx trustOptim]; }; ZOIP = derive2 { name="ZOIP"; version="0.1"; sha256="0fraxzr2mfd7w705j2fryhh9vpg6nkag6kmk7p7in3zknxwipfh3"; depends=[boot GHQp numDeriv rmutil]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; ZVCV = derive2 { name="ZVCV"; version="1.0.0"; sha256="1npw836q2skx54843lgxvb0rfwafckjc8k8dljykm60ad3z7zak8"; depends=[abind glmnet mvtnorm partitions Rcpp RcppArmadillo]; }; @@ -4785,19 +4868,22 @@ in with self; { aSPU = derive2 { name="aSPU"; version="1.48"; sha256="0kjvwwvyhiz9i5kxqg68lq6cvxnk9vzvp5zca5hfv2g77j42wh9h"; depends=[fields gee MASS matrixStats mvtnorm]; }; aTSA = derive2 { name="aTSA"; version="3.1.2"; sha256="1p3spas0sxj08hkb8p6k2fy64w86prlw1hbnrqnrklr0hnkg2g54"; depends=[]; }; aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.1"; sha256="1jg19ns3mxfycc11i2c152d83n4kqz3dd6d269sijnxrw80kzjki"; depends=[party randomForest rpart]; }; - aaSEA = derive2 { name="aaSEA"; version="1.0.0"; sha256="0x0vp91m3vxgzrs38mf36d24i5i7f03jsisbdrx7s1slbqzdrkv8"; depends=[Bios2cor DT Hmisc magrittr networkD3 plotly seqinr shiny shinydashboard]; }; + aaSEA = derive2 { name="aaSEA"; version="1.1.0"; sha256="0him4r8qyp0xssgrmdxjs45yn4d28h5anv4jyxxbbs9phb0m6j3h"; depends=[Bios2cor DT Hmisc magrittr networkD3 plotly seqinr shiny shinydashboard]; }; abbyyR = derive2 { name="abbyyR"; version="0.5.5"; sha256="1vldnd3dg89aj6a73nhirirqddbfdrnzhb5m3679i60sark8nk6r"; depends=[curl httr plyr progress readr XML]; }; abc = derive2 { name="abc"; version="2.1"; sha256="0ngzaaz2y2s03fhngvwipmy4kq38xrmyddaz6a6l858rxvadrlhb"; depends=[abc_data locfit MASS nnet quantreg]; }; abc_data = derive2 { name="abc.data"; version="1.0"; sha256="1bv1n68ah714ws58cf285n2s2v5vn7382lfjca4jxph57lyg8hmj"; depends=[]; }; + abcADM = derive2 { name="abcADM"; version="1.0"; sha256="0vcabnnnwc0psv9v3rda5aap9s8cq1pjh02zva3ki64hlavf2a10"; depends=[BH Rcpp]; }; abcdeFBA = derive2 { name="abcdeFBA"; version="0.4"; sha256="1rxjripy8v6bxi25vdfjnbk24zkmf752qbl73cin6nvnqflwxkx4"; depends=[corrplot lattice rgl Rglpk]; }; - abcrf = derive2 { name="abcrf"; version="1.8"; sha256="0r31ki89z8zzcffm0yvd2zw3q96rk6g6fnwwkql902mgajbrha1f"; depends=[doParallel foreach MASS matrixStats ranger Rcpp RcppArmadillo readr stringr]; }; + abcrf = derive2 { name="abcrf"; version="1.8.1"; sha256="1ghbd24yhqy3xhdxas6ccn84nkavqpgldx5ck8kijknc7qjm8k27"; depends=[doParallel foreach MASS matrixStats ranger Rcpp RcppArmadillo readr stringr]; }; + abcrlda = derive2 { name="abcrlda"; version="1.0.1"; sha256="0j29ifsvmxfx2g6v4bpbb4s6miwfpf4vlkpbgj6f2q078s4clc85"; depends=[]; }; abctools = derive2 { name="abctools"; version="1.1.3"; sha256="07s9dg10i8lsxl73b4n2hynca2fjgb0ykb0dz8c3zv6cgw3cyx97"; depends=[abc abind Hmisc plyr]; }; abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; }; + abemus = derive2 { name="abemus"; version="1.0.1"; sha256="1dhllb184byp1yl15rg2w02zgw3iajag7cxshirg47mnmm7n70bb"; depends=[data_table]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; abjutils = derive2 { name="abjutils"; version="0.2.3"; sha256="0n4zps65y3zg0gfzlv97w91si52a9izkncirskbkj5x9hk0nhxcv"; depends=[devtools dplyr furrr future glue httr magrittr progress purrr readr rlang rstudioapi scales stringi stringr tibble tidyr]; }; - abn = derive2 { name="abn"; version="2.1"; sha256="08jlvb6i5f7ry2dwm0jgrnn2w95vr0l67dpx13n9878lz9ld131b"; depends=[lme4 MASS nnet Rcpp RcppArmadillo rjags]; }; + abn = derive2 { name="abn"; version="2.2"; sha256="19w6bdjyp4zwqs6p0flry4qxqynf9rh8ykdrfrp61wrdf7kysw0d"; depends=[lme4 MASS nnet Rcpp RcppArmadillo rjags]; }; abnormality = derive2 { name="abnormality"; version="0.1.0"; sha256="1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"; depends=[MASS Matrix]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; abstractr = derive2 { name="abstractr"; version="0.1.0"; sha256="1ymwp7syrynwd4i8aj2x5n8jdi9d96fjzl6jb09n0bnr5fgl7vig"; depends=[colourpicker emojifont ggplot2 gridExtra rintrojs shiny shinythemes]; }; @@ -4838,12 +4924,13 @@ in with self; { adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; }; adaptMT = derive2 { name="adaptMT"; version="1.0.0"; sha256="1yllz1zd4cryf5bj8b2lcrj6zl79yjkllyh9p02ikryy5qmg419b"; depends=[]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; - adaptalint = derive2 { name="adaptalint"; version="0.2.3"; sha256="0n047zibp3jsw8d3c971xnqgl8nsqxzcayic0xkz917pwlfrdnd7"; depends=[dplyr lintr purrr]; }; + adaptalint = derive2 { name="adaptalint"; version="0.2.4"; sha256="15qdcvnnbgcps8j5k79354wsc9alswijv8lcafg2i3lghaw536yf"; depends=[dplyr lintr purrr]; }; adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.2"; sha256="0bb6hw77dfa66b12xyazlp992gwjb1plylixlmq4cv4yjhnl9n5z"; depends=[ape ggplot2 phyloseq shiny]; }; adaptivetau = derive2 { name="adaptivetau"; version="2.2-3"; sha256="1jficl4yidix35q8yqs3pcv813wq3pg4hpw4ah4dprvg95bl7wwx"; depends=[]; }; adaptsmoFMRI = derive2 { name="adaptsmoFMRI"; version="1.1"; sha256="1h79gh1bd6s2xhwf4whh72wf2cz4di2p8dnlf6192mfg108qc6nw"; depends=[coda Matrix MCMCpack mvtnorm spatstat]; }; addhaz = derive2 { name="addhaz"; version="0.5"; sha256="1709jq9rp5lhqk0qpk8zkdwzhcv1bcach8mm7yiz7hzcc1mgxb12"; depends=[boot MASS Matrix]; }; addhazard = derive2 { name="addhazard"; version="1.1.0"; sha256="0hk7br52wjmq605xgslv8lspr35aqpdgkiz2yljz31khy3y3vi8c"; depends=[ahaz rootSolve survival]; }; + addinsOutline = derive2 { name="addinsOutline"; version="0.1.6"; sha256="125qfqbpv5xflw8qlyh8m3iyd6biyp3arls3z7y8bqkbghifl730"; depends=[dplyr DT fs miniUI rmarkdown rstudioapi shiny shinyFiles stringr tibble yaml]; }; addinslist = derive2 { name="addinslist"; version="0.3"; sha256="0rw87zxlq3b7ka782qwqbn2cc7w1cwcpg68l8s1mkrdgyaar4wr0"; depends=[curl DT miniUI rappdirs remotes rmarkdown rvest shiny shinyjs xml2]; }; additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; @@ -4864,17 +4951,18 @@ in with self; { adespatial = derive2 { name="adespatial"; version="0.3-7"; sha256="0chbz14jii0gra6f7zncjrd1m2d2n5wwpq1ihjnwwk8jvyqskd1a"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; adfExplorer = derive2 { name="adfExplorer"; version="0.1.4"; sha256="11z6jm20giqmmz4dwcpa9fshvrmlmv8m0y1vg053nch05884niz2"; depends=[]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; - adimpro = derive2 { name="adimpro"; version="0.9.0"; sha256="1kg1vm72gcyj6rnj7hbf126r2p6n7x9v6sbzh1gdb047lk89wgc3"; depends=[awsMethods]; }; - adiv = derive2 { name="adiv"; version="1.2"; sha256="1lmq499ipv2a4f3270hdp54x8n7gij4ssgagxc9i35qwqwdbr8gy"; depends=[ade4 adegraphics adephylo ape cluster phylobase rgl]; }; + adimpro = derive2 { name="adimpro"; version="0.9.2"; sha256="1ajq2889y70lxjdpf5zdg7zkz35i3i92li72wb7nbfngxmw47xzv"; depends=[awsMethods]; }; + adiv = derive2 { name="adiv"; version="1.3"; sha256="0cmj9r8a6i6ag907g3a6likjz85vx7m6jrsfm3h2kwf29qr6d5lc"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR phylobase phylosignal phytools rgl]; }; adjclust = derive2 { name="adjclust"; version="0.5.7"; sha256="059gzbnwkmy1l8yqbl8ksz80nm6pf917sxplp048jzx57sxpry2k"; depends=[capushe Matrix matrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; adlift = derive2 { name="adlift"; version="1.4-1"; sha256="14q7fnhlqvxdhnfjhdhfmadz241srplbm069a7ybbsql21cphpf3"; depends=[EbayesThresh]; }; - admisc = derive2 { name="admisc"; version="0.4"; sha256="16vfbi2q8khzinj7aps05h3y66s0whmhx3h3909smsg96dhijclk"; depends=[]; }; + admisc = derive2 { name="admisc"; version="0.5"; sha256="0jqlac39rbvxi6xhyadkyxwmpjcpgl6fl8dn2yjnnn0qgs61y5c3"; depends=[]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; + admmDensestSubmatrix = derive2 { name="admmDensestSubmatrix"; version="0.1.0"; sha256="1a5lfm10aj6wdjibdnmffn75zvy6x69w8nqcx2i23gxg6v0xlqcl"; depends=[Rdpack]; }; adnuts = derive2 { name="adnuts"; version="1.0.1"; sha256="1l52f33yzbvcz27iw0k6iwcnfanr65lw206d7w4609k2vmlw8ink"; depends=[ellipse R2admb rstan]; }; adoption = derive2 { name="adoption"; version="0.6.2"; sha256="18mjhsh19bjmh27sv5fiay0xv1la0qy96v48b093f7kqfx4c21xb"; depends=[quadprog RandomFieldsUtils tkrplot]; }; - adoptr = derive2 { name="adoptr"; version="0.2.3"; sha256="0i1ckv9721vvxxr742ciy7kpy6wf2nk0wgr22fbmfnjqc8gqa5v2"; depends=[glue nloptr]; }; + adoptr = derive2 { name="adoptr"; version="0.3.0"; sha256="159g9wpxikw3x8g3h7j4ry2jndzq14zzwxrj6ajvnmgw115bqr2n"; depends=[glue nloptr]; }; adpss = derive2 { name="adpss"; version="0.1.1"; sha256="0p2gyfc4rxmms8zdsq4hjsh1njfl2s736arq8aq1am2wh1w9k5ch"; depends=[Rcpp]; }; ads = derive2 { name="ads"; version="1.5-3"; sha256="1k1japzcf0mafxkv9dlzaqz9n4c749lsx0lja4wj327ninpdcfy4"; depends=[ade4 spatstat]; }; advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; @@ -4896,18 +4984,20 @@ in with self; { agridat = derive2 { name="agridat"; version="1.16"; sha256="1kgmjrj207md86qivadkmv3s2gh3hi9zv63bsj8b9vlcd9f58pfk"; depends=[]; }; agriwater = derive2 { name="agriwater"; version="1.0.0"; sha256="0m1dpv69nf3pjp63z3a5710skgb6sbrmjv6b8rxvq9lrw63993g9"; depends=[raster rgdal sp]; }; agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; }; + agrostab = derive2 { name="agrostab"; version="0.1.0"; sha256="0mcskv3144j594wqljzn5pwbhkxh6sb76b1c2wabzjvi61zrapiv"; depends=[dplyr ggplot2 rlang]; }; agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; ahnr = derive2 { name="ahnr"; version="0.3.1"; sha256="1g8m3q108ricfyn4fjjaihpr93xz7fm2sfzg3i0fz1n1i703jwm8"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; }; ahp = derive2 { name="ahp"; version="0.2.12"; sha256="0zjhgl0smzx4bkhmdm4rmpyrq4hmxy1nkxvwqjr40pz7vm69icqx"; depends=[data_tree DiagrammeR formattable yaml]; }; - ahpsurvey = derive2 { name="ahpsurvey"; version="0.4.0"; sha256="0faz6zzh99i99krjws2x9177d6lxi52wn06jgq3qkh1kv27a83mb"; depends=[dplyr knitr magrittr randomNames Rdpack tidyr]; }; + ahpsurvey = derive2 { name="ahpsurvey"; version="0.4.1"; sha256="1r7x4c318nzbx0ppm9272kfpz2bln1cafkv9irnj85nsdcravr33"; depends=[dplyr knitr magrittr randomNames Rdpack tidyr]; }; aiRthermo = derive2 { name="aiRthermo"; version="1.2.1"; sha256="058082qdfi1pbdgf26vbfahri1kbc8b2l816q4dq89j5aj5is0a2"; depends=[]; }; aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; + aimsir17 = derive2 { name="aimsir17"; version="0.0.1"; sha256="0d3zygsnflymmfh7pflnynsf1klxjjyrqz5g5fnj2vwsicb40l4x"; depends=[tibble]; }; airGR = derive2 { name="airGR"; version="1.3.2.42"; sha256="0ll960jm0d56i0gn0g8yln0dvrhxc0b7kbhcfjsrshzb1lb3vq1v"; depends=[]; }; airGRteaching = derive2 { name="airGRteaching"; version="0.2.6.29"; sha256="15sjwkyvgxihiz35qc8rg1f7f3vb4wdwbrfb37gx8mzql0mwqx4q"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.8.2"; sha256="0z9knqdl7ihx2vph154qi1lh4s6yvlcw6kwry8k47mhh3p7pynsd"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; - airportr = derive2 { name="airportr"; version="0.1.2"; sha256="06jk4dhr4qj6fpmlvslnbqj67qy78spcb7yhqa4qn2im4kpmb73q"; depends=[dplyr]; }; + airportr = derive2 { name="airportr"; version="0.1.3"; sha256="1h8h0cdfqgxv8cf9hp82sx5n4a1z88qyyxicj7d2kmmybqqz2r5n"; depends=[dplyr]; }; airr = derive2 { name="airr"; version="1.2.0"; sha256="1vswbjmyhygmyqymkfxad9nwsbcgaggian1fyrx63w0y9c4dfv1h"; depends=[readr stringi yaml]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; @@ -4921,6 +5011,7 @@ in with self; { alfred = derive2 { name="alfred"; version="0.1.7"; sha256="1467rg5q2dqbqy8vj2061glb1gksq96rnjlifgyiv5rarwzy9b4y"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; }; algaeClassify = derive2 { name="algaeClassify"; version="1.2.0"; sha256="1sna5rij2ngpgqfz5cviqdbyr43xph8cbjc4vnm238n72zgg7cb6"; depends=[httr lubridate plyr RCurl rvest taxize XML xml2]; }; algorithmia = derive2 { name="algorithmia"; version="0.2.0"; sha256="0h1llcwk1qkxg26ikib44nd19da1q39n3gd8jwwb36687drl26qp"; depends=[base64enc httr rjson]; }; + aliases2entrez = derive2 { name="aliases2entrez"; version="0.0.6"; sha256="1s27y74kv9gzrsqvmsaj1f548b095x6zy41dind3q8xrhl1d72rd"; depends=[AnnotationDbi doParallel foreach limma org_Hs_eg_db RCurl readr]; }; alignfigR = derive2 { name="alignfigR"; version="0.1.1"; sha256="0jsj0h7zpzj6ynfydl8qbggm03xx8db769rli7rcx9909xdxabk6"; depends=[ggplot2]; }; alineR = derive2 { name="alineR"; version="1.1.4"; sha256="1gi4pl7ij60pz85yjiga5kvldraj9n3nhcyqdxrigs0cqvdwg3ar"; depends=[]; }; allan = derive2 { name="allan"; version="1.01"; sha256="02bv9d5ywbq67achfjifb3i7iiaaxa8r9x3qvpri2jl1cxnlf27m"; depends=[biglm]; }; @@ -4943,7 +5034,7 @@ in with self; { alterryx = derive2 { name="alterryx"; version="0.5.0"; sha256="1p9q4244bm7hf6my8q951idw41xa5gcrdl7znmsng9pwxh8dnz3h"; depends=[base64enc digest httr jsonlite]; }; altmeta = derive2 { name="altmeta"; version="2.2"; sha256="1k3p06v8ccj0dbjfpl4nw6579bwcy4j925rk15v55khqmrlx780l"; depends=[]; }; amap = derive2 { name="amap"; version="0.8-17"; sha256="1il94bkhl8192vawq4gr2gwyhqhid27jr2312rhvr72ssg8p713b"; depends=[]; }; - amber = derive2 { name="amber"; version="0.1.5"; sha256="16ghabpim0z9i5w49w1wq76hj9w4jan8axylg3mg7f4d1qhzja6r"; depends=[classInt doParallel foreach latex2exp ncdf4 raster rgeos scico sp spatial_tools viridis xtable]; }; + amber = derive2 { name="amber"; version="0.1.6"; sha256="0n9idgmkqnnsajybkbgczlrr1hyj5z98rixk451lh1r1j2cv8252"; depends=[classInt doParallel foreach Hmisc latex2exp ncdf4 raster rgdal rgeos scico sp viridis xtable]; }; ambhasGW = derive2 { name="ambhasGW"; version="0.0.2"; sha256="0v517i4whip45pk6bwlwval9pz367pcgzz62b2z22mrwgi6m6bck"; depends=[raster rgdal yaml]; }; ambient = derive2 { name="ambient"; version="0.1.0"; sha256="142q30rhi0wz0gp1v0swm83gbli8j6plpzzpqjwnjc693wd3a1ih"; depends=[Rcpp]; }; ameco = derive2 { name="ameco"; version="0.2.9"; sha256="0vzwsy7gp17ghl1hgcsbfs9rarzl8dl36x6lplnzrisqv3dqmk25"; depends=[]; }; @@ -4954,7 +5045,7 @@ in with self; { ammistability = derive2 { name="ammistability"; version="0.1.1"; sha256="1vp2857cwn4dd86vj8qf6h4z8hh5q2jvrlpmply8bf70mnmnq18h"; depends=[agricolae ggcorrplot ggplot2 Rdpack reshape2]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; amt = derive2 { name="amt"; version="0.0.7"; sha256="1az11vi5kd1sp76xvgshvamyw59dydhp6g4m6c2wqcdll88dlfgn"; depends=[broom checkmate circular ctmm dplyr fitdistrplus FNN geosphere glue KernSmooth lazyeval leaflet lubridate magrittr maptools purrr raster Rcpp rgeos rlang sf sp survival tibble tidyr velox]; }; - anMC = derive2 { name="anMC"; version="0.2.1"; sha256="02mzmaxjjbjqarfwdv6465p5hvnnpsqfkb1wkm68bx64cimgldki"; depends=[mvtnorm Rcpp RcppArmadillo]; }; + anMC = derive2 { name="anMC"; version="0.2.2"; sha256="0ab215nrqn535g9ayqzvgdckhwcrij1mc1296pvlj3grn3f8rhws"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; analogsea = derive2 { name="analogsea"; version="0.7.2"; sha256="1dfvdizbxdc00rcabcv1jpy3py4ncb3g2p1kim8m4sy9rdc299yq"; depends=[aws_s3 httr jsonlite magrittr yaml]; }; analogue = derive2 { name="analogue"; version="0.17-3"; sha256="1dd94hs517f7a11zjxm7wygcc1g72r5hff4figgmqf8c699p5d9y"; depends=[brglm lattice MASS mgcv princurve vegan]; }; @@ -5004,13 +5095,13 @@ in with self; { ape = derive2 { name="ape"; version="5.3"; sha256="08wbk1kxhs32bmmvqlqanbdg1w235amd35k8m00fngsj9h9xzc08"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.3"; sha256="0w9hi8pdjb3nschh4cy387q67jxhkl2bn9vir949rsl831x4cs1j"; depends=[pls]; }; apex = derive2 { name="apex"; version="1.0.3"; sha256="157i67yvb9xqlhzcgkxj7n5lq65svxs82z38dv2c0k8p4krjl1pd"; depends=[adegenet ape phangorn]; }; - apexcharter = derive2 { name="apexcharter"; version="0.1.2"; sha256="00rpyz0wpy7gjnmx5rr2s9lrzhbb7axy44vkhym1lbf89c2fvipm"; depends=[ggplot2 htmlwidgets magrittr rlang scales]; }; + apexcharter = derive2 { name="apexcharter"; version="0.1.3"; sha256="1kgn5bs329l2brrsd0qda87jgkjxa9ksm2plffl4v46nqkz53038"; depends=[ggplot2 htmlwidgets jsonlite magrittr rlang scales]; }; aphid = derive2 { name="aphid"; version="1.3.3"; sha256="1jqpn7w5sgy4k49qd9ci6yj89s55gzwl5w5ldw793mzpg6if7lfn"; depends=[kmer openssl Rcpp]; }; aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; aplpack = derive2 { name="aplpack"; version="1.3.3"; sha256="010saim43d3hr83ksi916846rh6qfbb0gvhsf5jbdx95m4bai9g3"; depends=[]; }; apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[aroma_light Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; apng = derive2 { name="apng"; version="1.0"; sha256="13hvr1w566anrhdicaqwqjgfq2lk3zkn5gcfgy8zazjnad4vy07y"; depends=[bitops]; }; - apollo = derive2 { name="apollo"; version="0.0.8"; sha256="0ffl6mw6gvkpx5jspfsss1crpks586lz38b513qw4i1a71pbrw5r"; depends=[coda maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB sandwich]; }; + apollo = derive2 { name="apollo"; version="0.0.9"; sha256="1gzwfra74bb8jihc75lgymf5m194xmk6wz7p9mhjchgvb98czjqz"; depends=[coda maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB sandwich]; }; apparent = derive2 { name="apparent"; version="1.1"; sha256="03n3pq620xg1vykzsmvxp6wr9hs561pl5ds50g7zmxk9z0ijcb32"; depends=[outliers]; }; apple = derive2 { name="apple"; version="0.3"; sha256="194z2f6hwdjjxdkjwlmfhpfp26p9yp3gparklhdbb6zlb4a9nnhz"; depends=[MASS]; }; appnn = derive2 { name="appnn"; version="1.0-0"; sha256="0wkpr6lcd68wlzk6n622ab7sd99l837073czn4k56hw8bw9v68j3"; depends=[]; }; @@ -5024,7 +5115,7 @@ in with self; { apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; aptg = derive2 { name="aptg"; version="0.1.0"; sha256="06z8041h1k9v0ymd7azn11xzhqxb8lda4r7nyg51h8z3i8mpq1ba"; depends=[ape brranching phytools taxize xml2]; }; aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; - aqp = derive2 { name="aqp"; version="1.17"; sha256="1r3yxb3dw9drgi6xpzyrmg9i08l1mrvdc05v5mwvhhply7v8n3d4"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.18"; sha256="0r51pwz2wdq4fbrn2jcw9byb159m6gflxc9pwxp4klgzmmd64li3"; depends=[cluster digest lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; ar_matrix = derive2 { name="ar.matrix"; version="0.1.0"; sha256="1d531hkl50szfa1q0zbp8dp1a9jli63kwvxjgc9n0ar279y47qdz"; depends=[MASS Matrix sp sparseMVN]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; @@ -5043,8 +5134,8 @@ in with self; { arfima = derive2 { name="arfima"; version="1.7-0"; sha256="0kj8qv6m2fcdw8x735n8fk9cynm0jxi5v9hif0f879sxk6qkxb9y"; depends=[ltsa]; }; argo = derive2 { name="argo"; version="2.0.0"; sha256="0gy43p7wdja3q99db56b8dr3yx8ca0zjv4gc33xv61fypdimgqrd"; depends=[boot glmnet Matrix XML xtable xts zoo]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; - argonDash = derive2 { name="argonDash"; version="0.1.0"; sha256="002q766mhwasq44yr39k8rhdxgbz4l1zxg26i3r2gbc260if4jbd"; depends=[argonR htmltools shiny]; }; - argonR = derive2 { name="argonR"; version="0.1.0"; sha256="053cwvaacddixr84y05qaffykvk6bymhisdgafs24zcirdqzpl0a"; depends=[htmltools]; }; + argonDash = derive2 { name="argonDash"; version="0.2.0"; sha256="1wykr7y5375g1nb18ynybccxmd948xrr0gdwxxqsfjf782vlgd2d"; depends=[argonR htmltools shiny]; }; + argonR = derive2 { name="argonR"; version="0.2.0"; sha256="15hlvansqnky9bnq4r7xza3hb1hzylmhz8117wxz9lxa1wiky2is"; depends=[htmltools rstudioapi]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; argparse = derive2 { name="argparse"; version="2.0.1"; sha256="1as7h6z7kzgv0fqzpnp76qbm96b4jcd37azd58b7rz0l1n94764l"; depends=[findpython jsonlite R6]; }; argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; }; @@ -5061,27 +5152,27 @@ in with self; { aroma_core = derive2 { name="aroma.core"; version="3.2.0"; sha256="1c4spy2sc80clz49irzilsqy65k6q2vl86qaydnymkzljcz7bbpg"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; arpr = derive2 { name="arpr"; version="0.1.1"; sha256="0j69nbmhmhmyfna011gv68wvxv1x2lijz94pyg9g2ax720x74i2q"; depends=[magrittr]; }; arrApply = derive2 { name="arrApply"; version="2.1"; sha256="0qy7iwi580rrf3sycsbv6qgxsqcdy9pdbnkdrx81j68qni9iw737"; depends=[Rcpp RcppArmadillo]; }; - arrangements = derive2 { name="arrangements"; version="1.1.6"; sha256="0napqfai243lpkcqbwzv8qi1apn6xi59yifay69cjdmxwkw51yv5"; depends=[gmp R6]; }; + arrangements = derive2 { name="arrangements"; version="1.1.7"; sha256="1amnpkgzmdwybfdqpc8c7v5h5cf19idmc552xsv7c7bmlclyrjv2"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; - arrow = derive2 { name="arrow"; version="0.14.1.1"; sha256="1m2rrqkh7zvfpajj15aii3yydgf3ci3n3ji7ic81zv1jghmrd9rd"; depends=[assertthat bit64 fs purrr R6 Rcpp rlang tidyselect]; }; + arrow = derive2 { name="arrow"; version="0.15.1.1"; sha256="0qdzq22x3cqfwa9a62rl718kbmq87rk3s0k17hsh5122sb8lwvh1"; depends=[assertthat bit64 purrr R6 Rcpp rlang tidyselect]; }; ars = derive2 { name="ars"; version="0.6"; sha256="0zs1rk3i7pc9wcvxrvjcls194mfbvmkz7cb6pwd1cm3fzjwsyxsp"; depends=[]; }; arse = derive2 { name="arse"; version="1.0.0"; sha256="0ssaalc058m09gfcr1n0s729rx2plia3zkhlynj67drclyvhyb0i"; depends=[dplyr pracma]; }; arsenal = derive2 { name="arsenal"; version="3.3.0"; sha256="1bn1i5cdy6caw6ndqcfy41x3qb0hj3g4r8p4jl24gljygd3rvzgh"; depends=[]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; arules = derive2 { name="arules"; version="1.6-4"; sha256="003c5cd3xzq39h7c19px077ygm0n1v7k83icy5zzrnkagyds2p8n"; depends=[Matrix]; }; - arulesCBA = derive2 { name="arulesCBA"; version="1.1.4"; sha256="1d0ln8mislns7ix1rch63ry4856b2cnpx99rmw9d967dmvyrm8vs"; depends=[arules discretization Matrix testthat]; }; + arulesCBA = derive2 { name="arulesCBA"; version="1.1.5"; sha256="0mzsc9abnyj1fzvrdz26czrigmp96nhw6f832m69a2fqmld2qgkg"; depends=[arules discretization glmnet Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; arulesSequences = derive2 { name="arulesSequences"; version="0.2-22"; sha256="0m4g1mgc1swixq9z2v30bjvgnkqsjrinsmwqznrycxyzcgwbn8b3"; depends=[arules]; }; arulesViz = derive2 { name="arulesViz"; version="1.3-3"; sha256="1c51l4hqai07qx20lbdvffxw9kx0vkgbccw7b9wz1h2n5ma90c8y"; depends=[arules colorspace DT igraph plotly scatterplot3d seriation vcd visNetwork]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; asbio = derive2 { name="asbio"; version="1.5-5"; sha256="0nq388b9ma0a3p5l57v1b4js8i2a6n5rip3yi0zzzfwi3n3kxi77"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; - asciiSetupReader = derive2 { name="asciiSetupReader"; version="2.1.0"; sha256="1bvdlmr83qhjxjdyh69h6gnf8dffpqi5v60fm5z8q1j9rh3c2sr7"; depends=[data_table haven readr stringr zoo]; }; + asciiSetupReader = derive2 { name="asciiSetupReader"; version="2.2.0"; sha256="1xh8ksxdf1i2p8pagppw1bw5s190yicpxcyc213ml3s0r4h071s5"; depends=[data_table haven miniUI readr rstudioapi shiny stringr zoo]; }; asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; }; asd = derive2 { name="asd"; version="2.2"; sha256="0p3r4qjam3sl3rpcilb0pgx4xx3ly71xqnvkv31vzjs885lgxz4l"; depends=[mvtnorm]; }; asdreader = derive2 { name="asdreader"; version="0.1-3"; sha256="15a922aw0v5w4hrha03xifx8cpifcc773gambgwqq6i5nz08ya26"; depends=[]; }; ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; }; - ashr = derive2 { name="ashr"; version="2.2-32"; sha256="0k3kh42g1py3s94chnq3nxm44dr4j8nqzwrassl3abc0rhh5f2v4"; depends=[assertthat doParallel etrunct foreach Matrix mixsqp pscl Rcpp SQUAREM truncnorm]; }; + ashr = derive2 { name="ashr"; version="2.2-39"; sha256="170scg00a65kwbf7kx7lszgsgq243q5c2f0rs289qn2vqpf935b8"; depends=[assertthat doParallel etrunct foreach Matrix mixsqp pscl Rcpp SQUAREM truncnorm]; }; asht = derive2 { name="asht"; version="0.9.4"; sha256="1aq384vgf26ig3isyp99z09glcjhl2qd43kp8qdcwk75dcrmxd7z"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; askpass = derive2 { name="askpass"; version="1.1"; sha256="07q0ik8jzk44vpwh48rr3fnpd7dzsdhjjsl4l850rffv3dyq4h6v"; depends=[sys]; }; aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; @@ -5110,7 +5201,8 @@ in with self; { assertr = derive2 { name="assertr"; version="2.6"; sha256="0g4ii6vhp0155a29ljhs64a09x0nzy5ybvwwchhk4mkcgsvnvfkj"; depends=[dplyr MASS rlang]; }; assertthat = derive2 { name="assertthat"; version="0.2.1"; sha256="17wy5bdfzg73sg2clisg1k3zyn1adkj59x56m5nwia2k8z67zkw5"; depends=[]; }; assignPOP = derive2 { name="assignPOP"; version="1.1.7"; sha256="0zx7cblfzfpi5jvagni56845lg198zkx5q43ip3lg8h0sq2h8qp2"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; - assist = derive2 { name="assist"; version="3.1.5"; sha256="12mzg1lqy0f35m0bq7kb4jw0l5g0rsghx11ibgz06w6s31g734ar"; depends=[lattice nlme]; }; + assignR = derive2 { name="assignR"; version="1.1.3"; sha256="0pmzgz955nqxlcnb0f0kbv415kysjl12niyh704ksvhs5yw0xhah"; depends=[maptools raster rgdal sp]; }; + assist = derive2 { name="assist"; version="3.1.6"; sha256="13r029z32f2xcspafx01jkgmabbjcvnp8wg1wx1liwxh3mf2zalg"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; aster = derive2 { name="aster"; version="1.0-3"; sha256="1bcghw30db8m39fqza2msi6ahfn6yx7gaa3fzcmnxb8jrvrlpjgy"; depends=[trust]; }; @@ -5126,17 +5218,18 @@ in with self; { asymmetry = derive2 { name="asymmetry"; version="2.0.2"; sha256="0x5yzlf804mhwfr9244b04vnixiyh5d8vmqrfffgid3dijg2zszm"; depends=[gplots smacof]; }; asympTest = derive2 { name="asympTest"; version="0.1.4"; sha256="02l07psiy1888zx86j2r1l5lznz47wdmzbh39pd2nbj8r9i80szr"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; - atable = derive2 { name="atable"; version="0.1.2"; sha256="0859yyg2a548wajsmjljzk5hysj14fgsk63qhy35838rkgw85zxc"; depends=[DescTools doBy effsize Hmisc plyr reshape2 settings]; }; + atable = derive2 { name="atable"; version="0.1.5"; sha256="0jvlch6yhcz5azxj9yllah0x98plws5camxqis58qyqiapgvl9h8"; depends=[DescTools doBy effsize Hmisc plyr reshape2 settings]; }; atlas = derive2 { name="atlas"; version="1.0.0"; sha256="02wm22j40llmdi6z3rzgbc5fpkzmjfq0xar33bypvj1dx1zxygnd"; depends=[httr testthat]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; atmopt = derive2 { name="atmopt"; version="0.1.0"; sha256="1h79ngq1236gz4w29fs3nj46a3m1x8a28z3xnhc6wn3a46cf8zzi"; depends=[DoE_base gtools hierNet]; }; atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; }; attachment = derive2 { name="attachment"; version="0.0.9"; sha256="0z47v5nqvw0grgll2bl66zy82igg1ncy78jm9dwv45yd4dl2xi10"; depends=[desc devtools glue knitr magrittr rmarkdown stringr]; }; attempt = derive2 { name="attempt"; version="0.3.0"; sha256="1q0r4r0hirw2kxsvcq5rqkmbxzi7fa6fxaqi6rmzwiz25025iv71"; depends=[rlang]; }; + attenuation = derive2 { name="attenuation"; version="1.0.0"; sha256="0ys4psvkvimmym4qj9cmhq8y7x10kv0x6bsvpjkrsc3l8p2g3474"; depends=[]; }; attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; }; atus = derive2 { name="atus"; version="0.2"; sha256="1i67rx8p5v4shgbfcym4lbnlw55xx7w2fdzhgsgjjyfpwbpm7h4h"; depends=[]; }; auRoc = derive2 { name="auRoc"; version="0.2-0"; sha256="1q5cpa1y96bs5x0vifi0h6ca4yasg3z57yhq29vicd433h3phy3x"; depends=[coda MBESS ProbYX rjags]; }; - aucm = derive2 { name="aucm"; version="2018.1-24"; sha256="0x10dawlwxqywjl7mxc2gpp2r4wnd7pb6n80xlrb9yywm7zbb6x2"; depends=[kyotil]; }; + aucm = derive2 { name="aucm"; version="2019.12-1"; sha256="1vjb5jiq2iz6c8nhfcbqg21nms7nf485xlrgd7mdkbzvqxxl43h6"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; audio = derive2 { name="audio"; version="0.1-6"; sha256="1f3k7n8x716kqx439jd0g0dc5iwc33jzzas4ikjrlgidp89i89iz"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; @@ -5167,7 +5260,7 @@ in with self; { avar = derive2 { name="avar"; version="0.1.0"; sha256="00pp2irhw04jry545l4hvklf25aphdrz8djrhxx2936icgxz5kw4"; depends=[Rcpp RcppArmadillo simts]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; aweek = derive2 { name="aweek"; version="1.0.0"; sha256="0a9d4yp694qch34mf08qc5fwsn21h9mw1ak6vylaq73nwiihajw9"; depends=[]; }; - aws = derive2 { name="aws"; version="2.2-1"; sha256="1g0saj3v67cjdk6396ck3ah7qvv3m9awj4b3v1n86nkwdpa75z91"; depends=[awsMethods gsl]; }; + aws = derive2 { name="aws"; version="2.3-0"; sha256="12gp0jv63hrvbjl38ksdb024c79bgglvzvl2j32z2kjdd2lhi90b"; depends=[awsMethods gsl]; }; aws_alexa = derive2 { name="aws.alexa"; version="0.1.7"; sha256="0k3kwkmi13j2nrkyi6ahpc98s24idx4m5s4wkqkgqhi8xaljpp7c"; depends=[aws_signature dplyr httr xml2]; }; aws_cloudtrail = derive2 { name="aws.cloudtrail"; version="0.1.5"; sha256="0p7qj9ivs14ska11a9qni4n0f8d05c1p126zvlxj9038c9p0y1wx"; depends=[aws_s3 aws_signature httr jsonlite]; }; aws_comprehend = derive2 { name="aws.comprehend"; version="0.1.2"; sha256="0480ggfdmcv2pkjzmwh40h4nd87qswrpwr6h3j959f9y8zmzfd7n"; depends=[aws_signature httr jsonlite]; }; @@ -5186,6 +5279,7 @@ in with self; { awsMethods = derive2 { name="awsMethods"; version="1.1-1"; sha256="0hbmrcpdyg15zg4rysscsmxpxlpy0dkxx2aa63qibq7l1k14v4sh"; depends=[]; }; awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; }; awspack = derive2 { name="awspack"; version="0.1.6"; sha256="0pf6g9w2r2rm887sa3v0gfwia2w2q94m40m76sq66gb3spkmngd5"; depends=[aws_alexa aws_cloudtrail aws_ec2metadata aws_iam aws_lambda aws_polly aws_s3 aws_ses aws_signature aws_sns aws_sqs]; }; + azuremlsdk = derive2 { name="azuremlsdk"; version="0.5.7"; sha256="1r9s1avkr03hradzr66lz7xxz4s6ax8d6amxkhcnphyaykss8gh1"; depends=[DT ggplot2 htmltools plyr reticulate rstudioapi]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; bReeze = derive2 { name="bReeze"; version="0.4-3"; sha256="17nc6qvw9l6sq8knd1mk193md2y3z1jlcjymqzl389yxj8s0i2il"; depends=[lubridate]; }; @@ -5195,27 +5289,27 @@ in with self; { babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babelwhale = derive2 { name="babelwhale"; version="1.0.1"; sha256="0mgkg9hji4mab3l33vvyyyc1d2q84l1zrmg63vr3b3gr0d62jcnl"; depends=[crayon dplyr dynutils processx purrr]; }; babynames = derive2 { name="babynames"; version="1.0.0"; sha256="1vchzyk5pkr0zhh1q8k9g771n45jxiislipwkgrgamv7yzr49xsp"; depends=[tibble]; }; - bacistool = derive2 { name="bacistool"; version="0.9.8"; sha256="1yq7d2657l6iyy5v094c9rwphbpyhnijhwvacwhb07k6c6h069wh"; depends=[rjags]; }; + bacistool = derive2 { name="bacistool"; version="0.9.9"; sha256="06734pi829xhfkpdhysa62x1sc0shhbdn6l9vls2cyfr30w6y6md"; depends=[rjags]; }; backShift = derive2 { name="backShift"; version="0.1.4.2"; sha256="1nj7mcdpzfzq68qg86rrys752gzw69n99yyb0jzg6r8qrgpcxj49"; depends=[clue ggplot2 igraph MASS matrixcalc mvnmle reshape2]; }; - backbone = derive2 { name="backbone"; version="1.0.0"; sha256="1dddkn0q98xrjr81z8yhcr2rn9mcadc6zcsmdg8mrf51yjpqxg8a"; depends=[Matrix]; }; + backbone = derive2 { name="backbone"; version="1.1.0"; sha256="1ggs22s5pxy0y8plnnr1mkvgcc3bvpz9a2427cw3kpp61gcsh5a8"; depends=[Matrix poibin]; }; backpipe = derive2 { name="backpipe"; version="0.2.3"; sha256="12k2cv9x8h0b002m9c8g4vj5a7chp4b8jqz377ia0diqw89dydpm"; depends=[]; }; backports = derive2 { name="backports"; version="1.1.5"; sha256="0k19w68b2aihyj5mflw3732gkkzs78sssqdns960pdw3yfnkiv33"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; badgecreatr = derive2 { name="badgecreatr"; version="0.2.0"; sha256="0mdixklaxky5gs8zm99ky280vxxlbq1mxnaarq6x0d1cb71bzv4l"; depends=[git2r]; }; - badger = derive2 { name="badger"; version="0.0.4"; sha256="0y0kr0r5b44c19w93sisd61khiwhlgj3n88mhfgs3ljbl68qjcvh"; depends=[dlstats rvcheck]; }; + badger = derive2 { name="badger"; version="0.0.7"; sha256="1djgzn6ixfsdr0v4f3714mv2z2kl776dd2hq670g7bla4lp6344s"; depends=[desc dlstats rvcheck]; }; bagRboostR = derive2 { name="bagRboostR"; version="0.0.2"; sha256="1k9w98p3ad3myzyqhcrc4rsn7196qvhnmk5ddx3fpd1rdvy2dnby"; depends=[randomForest]; }; baggedcv = derive2 { name="baggedcv"; version="1.0"; sha256="1rqs4sm6g1anck5s2dxlm1vcmylpphcbs2dpvf1sjki5lrzdq9z4"; depends=[doParallel foreach kedd mclust]; }; - baggr = derive2 { name="baggr"; version="0.1.0"; sha256="04iqvdj3ih5i6qwb25rmngvhw66v00xb2x5mzgbicd712dydp57s"; depends=[bayesplot BH crayon ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders]; }; + baggr = derive2 { name="baggr"; version="0.2.0"; sha256="0hg7wxyq072vf1sqbiai9lgfc01k2l7v99nnlmlgy1m3r3m5f631"; depends=[bayesplot BH crayon ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders testthat]; }; bain = derive2 { name="bain"; version="0.2.2"; sha256="08cgqba073hkisg122612va8ry971cvqs564gg9c7cfyipg5rilz"; depends=[lavaan]; }; bairt = derive2 { name="bairt"; version="0.1.2"; sha256="17nc0lp0bzwshik33v0gq5d6nd2gvm4799b7rfiq089zhnzv90kj"; depends=[coda mvtnorm shiny shinyjs]; }; baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; balance = derive2 { name="balance"; version="0.2.4"; sha256="13ksd1ysd2by8qdc3vn1fgnaj1c2v0py7f501bajiyq6hpcwn1c5"; depends=[ggplot2]; }; - ballr = derive2 { name="ballr"; version="0.2.3"; sha256="1bfbdzn4q3i5m87vbxymxha54vgxjfckzpxk52m54fkwpz6yw9cl"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; + ballr = derive2 { name="ballr"; version="0.2.4"; sha256="0b9y5cr2qwgdnhv15ir7d3fiajg9lzccs0k8v19gq491201ssa1w"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; bama = derive2 { name="bama"; version="0.9.1"; sha256="1yx0gv5qxq3si5vzrrjy8y6d3b0v433aljyniyx9dp6q6mcqrhvw"; depends=[Rcpp RcppArmadillo]; }; bamboo = derive2 { name="bamboo"; version="0.9.24"; sha256="1fw1wniba0kxb44d2w9r9nh5sy1jhrk48bn0zblz2y6gvwn8m2vn"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.3.2"; sha256="11v9hy8ijbcqhwim0s3y69dz11jvys4vjvfnshj4p5qdz38sji6l"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="1.1-0"; sha256="1d1b6hzfyq03p0va568rckc9fm6b9k9dsdx1zp50w8jnf5bfns8x"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; + bamlss = derive2 { name="bamlss"; version="1.1-1"; sha256="06i0yfmq5k98yqs8mfw3ppkanlp34v18fb1xynxaxwgj9d58h5k3"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; bamp = derive2 { name="bamp"; version="2.0.7"; sha256="0yrqy4cj6wq98d5yfm9ahzhp2giwyqzd93s2fhxb8r4mzza5i9hm"; depends=[abind coda]; }; banR = derive2 { name="banR"; version="0.2.0"; sha256="0m71m99f8f4wckylry6z16gw6r2cc4wxbd9287ns00jr6s13x6c8"; depends=[dplyr httr magrittr purrr readr rlang stringr tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; @@ -5225,6 +5319,7 @@ in with self; { banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; + barplot3d = derive2 { name="barplot3d"; version="1.0.1"; sha256="182kpiknv3id1bsgcc6b3ahbxmm8x3lxcpf1r6rckpr3s0whfx3g"; depends=[rgl]; }; barsurf = derive2 { name="barsurf"; version="0.3.1"; sha256="07s43sy5200mwxasmcar4lsw7bm1112ck7z62rbyxnawg1zmrwq5"; depends=[colorspace]; }; bartMachine = derive2 { name="bartMachine"; version="1.2.4.2"; sha256="100zcpbndbps01qnybrgmsfnh37j93661l4v7zcin0i56cvgg998"; depends=[bartMachineJARs car missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.1"; sha256="1wpfzrb6mrx3xmxy4rgnwygmpqq2l4ki2xqr4m51g1bl9nwirhzj"; depends=[rJava]; }; @@ -5234,14 +5329,15 @@ in with self; { base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.4"; sha256="0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - basefun = derive2 { name="basefun"; version="1.0-5"; sha256="1w8nbwpa9invndhlndha4dsrmvmar4xar1hzixnxkcbrzj6yzmi8"; depends=[Matrix orthopolynom polynom variables]; }; - baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; }; - basetheme = derive2 { name="basetheme"; version="0.1.1"; sha256="021zgrdqz1yvb2linraskfk9cxqjjc3p5z5r0dhhnrkpy4ijbkyz"; depends=[]; }; - basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.2"; sha256="1yhdhl1vzvz7wysrgj96dgqsbdc1p7031m0m69m8ha8wx4vryil8"; depends=[]; }; + baseflow = derive2 { name="baseflow"; version="0.11.2"; sha256="10y73s22xmrzvm697vdmnr7zal83jrxy4ifvskyhdqzsljj53p3j"; depends=[airGR]; }; + basefun = derive2 { name="basefun"; version="1.0-6"; sha256="08ys5iqzbf95pimgaj1g2q7lwhxj73jc737ap55358h75dx0nzdx"; depends=[Matrix orthopolynom polynom variables]; }; + baseline = derive2 { name="baseline"; version="1.2-2"; sha256="044m1znvz2c6h0z7x4zkqxld2l138kpv2pirbiz41pk72gvzv50v"; depends=[SparseM]; }; + basetheme = derive2 { name="basetheme"; version="0.1.2"; sha256="0yck4qc7qd406s7kw95xgnfc0pfvzk3ylhkv6mk6l2wbkfm8ldrb"; depends=[]; }; + basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.4"; sha256="03mggvdasqrkq41dpfwsrhnxh98hfqfr3z58hrfhnjrzydwxbci9"; depends=[]; }; basicTrendline = derive2 { name="basicTrendline"; version="2.0.3"; sha256="10rq9hriyn50b28ikvl0vsvchbkrc0pjzxamq4ix1xd04n4drkl9"; depends=[investr scales]; }; basicspace = derive2 { name="basicspace"; version="0.20"; sha256="0nyljk8ydasirgv7ijxplyhk10s8m9k3rw5qmgf0z81dm7p257wc"; depends=[]; }; basictabler = derive2 { name="basictabler"; version="0.3.0"; sha256="1dzjdgc8ffnr219m5zb410ln1rbnzz96g1aqb70pkg9gp0ykgk29"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; - basket = derive2 { name="basket"; version="0.9.2"; sha256="1d5qrnb4130ijbnq309992g3ak7zs5kl3ywii732bpnpzz6mssf7"; depends=[cli crayon dplyr foreach GenSA ggplot2 gridExtra igraph itertools tibble tidyr]; }; + basket = derive2 { name="basket"; version="0.9.10"; sha256="1773f0abhz854sdb0jfhmfpgxpkagb3x6mzi77jycfl6ywhry48h"; depends=[cli crayon dplyr foreach GenSA ggplot2 gridExtra igraph itertools RColorBrewer tibble tidyr]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; @@ -5260,12 +5356,13 @@ in with self; { bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; bayesImageS = derive2 { name="bayesImageS"; version="0.6-0"; sha256="1m0az3z8hwaxpqd1ljly9vlp41dp7c7p39r0rx7k9vcs201vlcg8"; depends=[Rcpp RcppArmadillo]; }; - bayesLife = derive2 { name="bayesLife"; version="4.0-2"; sha256="0c4jcrwg6rgj0irmw3r6j1xyb6m76fn3wqxjrl2r9i408hnfnw83"; depends=[bayesTFR car coda data_table hett wpp2017]; }; - bayesPop = derive2 { name="bayesPop"; version="7.0-0"; sha256="1ydr0hds09xa17117y9dvk2sym2jfk0yjip79dig9c2vsykns0cm"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; + bayesLife = derive2 { name="bayesLife"; version="4.1-0"; sha256="1sswnwv4x77sd07d3hpsf3wfd5szrdnc4fni8glzl8rk3y0r3jns"; depends=[bayesTFR car coda data_table hett wpp2019]; }; + bayesPop = derive2 { name="bayesPop"; version="8.1-1"; sha256="1xhzind6k23rcgy1iw0bqks6wz77755qs9pw6sqinfi8qbv0ax1l"; depends=[abind bayesLife bayesTFR data_table fields googleVis MortCast plyr reshape2 rworldmap wpp2012 wpp2019]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="6.3-1"; sha256="0ddassahnba4xlbj9iqf49qw2pmqa3gskvm5dr0b31a3zg1n7dfa"; depends=[coda MASS mvtnorm wpp2017]; }; + bayesTFR = derive2 { name="bayesTFR"; version="6.4-0"; sha256="159lcii3hpl91vypl16adzair6ik85fyjybyy6fjibxvjkn3fh3b"; depends=[coda MASS mvtnorm wpp2019]; }; bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; + bayesanova = derive2 { name="bayesanova"; version="1.2"; sha256="1qn3bjy2k12xg67xrlscrl6nql2g0v3i3r5c0349xpq1ya2kaiya"; depends=[]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.2"; sha256="0976ryd0gbw3kpmxg2qxyp1m2swnrpa86vdhvqrqxp7fcrs8cs2z"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; @@ -5275,24 +5372,25 @@ in with self; { bayeslm = derive2 { name="bayeslm"; version="0.8.0"; sha256="1gvqkbz1wmqkxjwkdgj5pir5j1qy5dzjm4jv6mz3mplm16z5vzbl"; depends=[coda Rcpp RcppArmadillo RcppParallel]; }; bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; - bayesm = derive2 { name="bayesm"; version="3.1-3"; sha256="041ach2f2vrqzd5kz17v7wmkjz6z8cjjihpk4qvczm4cr9z85r2i"; depends=[Rcpp RcppArmadillo]; }; + bayesm = derive2 { name="bayesm"; version="3.1-4"; sha256="154glks7rsjkza0sfi1kj7wj727py9sl1ba6sswflwmwc9n226q6"; depends=[Rcpp RcppArmadillo]; }; bayesmeta = derive2 { name="bayesmeta"; version="2.4"; sha256="0h2b237ml90z9xcbjy5fgc4l8k09210g101cf25mngbz76wxvy87"; depends=[forestplot metafor]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; - bayesplot = derive2 { name="bayesplot"; version="1.7.0"; sha256="0h23sbfny2hcipvvfhq5aiwdh1vanizn7f8lpb9kffypxhcd7v7w"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; + bayesplot = derive2 { name="bayesplot"; version="1.7.1"; sha256="0sq0ajnm96hmlqf1cv5n2gshh3qdij4n1zbm7qrniz2q6b5aj342"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; bayesreg = derive2 { name="bayesreg"; version="1.1"; sha256="12g5sklip3i8fpzrhvbikhgnl6kx8fxb88hfv8f34jy71r3h7zyp"; depends=[pgdraw]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayest = derive2 { name="bayest"; version="1.0"; sha256="0ysfy96s9pk0xw0rzygf43c5jpj9j37kap3cd6w3m6361a0dw8mj"; depends=[]; }; - bayestestR = derive2 { name="bayestestR"; version="0.3.0"; sha256="0r453zb106hj9w53jjgckxqajjf7shlrgv10gjxsv8if6qybdz5b"; depends=[insight]; }; + bayestestR = derive2 { name="bayestestR"; version="0.4.0"; sha256="1d3f50rzjzgzclwd6j887dssyhv7hdq7pik9nnlr3w775v3f69zc"; depends=[insight]; }; bayesvl = derive2 { name="bayesvl"; version="0.8.5"; sha256="1gb2in8hjiqb3daqz6phn1639i6p2w641kxrm3zh4rm3d6hg6hzr"; depends=[bayesplot bnlearn coda dplyr ggplot2 reshape2 rstan StanHeaders viridis]; }; bayfoxr = derive2 { name="bayfoxr"; version="0.0.1"; sha256="1295296mbjpmd0bg1pfxvyp0az3sry6gsq9ir3l8x64w5a4qrzd5"; depends=[]; }; + baymedr = derive2 { name="baymedr"; version="0.1.0"; sha256="0y01s6dpnhnxqqvl15cdxmb5ysb685bbp47xifyp5nz8sjh2pci0"; depends=[rlang stringr]; }; bayou = derive2 { name="bayou"; version="2.1.1"; sha256="17gvb2dmviwibnlqn6p3p9pcc3705xh9r8lrm90p0yg7nhm0cn02"; depends=[ape assertthat coda denstrip fitdistrplus foreach geiger MASS Matrix mnormt phytools Rcpp RcppArmadillo]; }; baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; baytrends = derive2 { name="baytrends"; version="1.1.0"; sha256="0yml560cbamp7pf433va28vsfi5rcrjm61rbk8384bbjlslpsdkj"; depends=[dataRetrieval digest gdata lubridate memoise mgcv plyr survival XML zCompositions]; }; bazar = derive2 { name="bazar"; version="1.0.11"; sha256="1q2w5pvlb51lzbb5k719sf1lrhffandkfqlcvi2prw4dmq7qjxv9"; depends=[kimisc]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; - bbl = derive2 { name="bbl"; version="0.1.5"; sha256="1xp89cq27msqhq297i0syh3m0cwnmai0ii502x78m7fx7kgf5v1b"; depends=[pROC Rcpp]; }; + bbl = derive2 { name="bbl"; version="0.2.0"; sha256="027awr8xx86wv6xhpj4ywwgldmmf2ln5161ak51kqnygfdavy8bc"; depends=[pROC RColorBrewer Rcpp]; }; bbmle = derive2 { name="bbmle"; version="1.0.20"; sha256="1xzij7swrrzl5ly8l3lw6awh486zcm00251dwqws1y23fbgyh3vc"; depends=[lattice MASS numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; @@ -5300,6 +5398,7 @@ in with self; { bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-3"; sha256="1g9l4abnpp1iq5wy3rl2jv47ql9zh6s2qrhyj06x22358lpinjnl"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; bcaboot = derive2 { name="bcaboot"; version="0.2-1"; sha256="0wf1igkb0lidz4pvh3kfccs9858m1g9650wprrvrpwsdfrcd7rc9"; depends=[]; }; + bcdata = derive2 { name="bcdata"; version="0.1.1"; sha256="0qygwdly1k6g9zr1qbf21ylnq3713724d1ninw99syirz5knk16k"; depends=[cli crul dbplyr dplyr glue jsonlite leaflet leaflet_extras purrr readr readxl rlang sf xml2]; }; bcf = derive2 { name="bcf"; version="1.3"; sha256="1f8szjgsyhnff3zzmmy7bnsam12ywj46n3fxsj1y3fn1m5wnd8mz"; depends=[Rcpp RcppArmadillo]; }; bcgam = derive2 { name="bcgam"; version="1.0"; sha256="1dg2fcjw8xal77irviiz260qpar2iqkjvi2k4qfm71jyq0ir0axk"; depends=[coda igraph nimble]; }; bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; }; @@ -5311,7 +5410,6 @@ in with self; { bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; }; bdDwC = derive2 { name="bdDwC"; version="0.1.15"; sha256="0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0"; depends=[shiny shinyBS shinydashboard shinyFiles shinyjs]; }; - bda = derive2 { name="bda"; version="10.1.9"; sha256="06ycxqjpnsywakjkjxf1czhxsbdzbpwa11m69gad5538z066d24x"; depends=[]; }; bdchecks = derive2 { name="bdchecks"; version="0.1.7"; sha256="1pzsvn1m1f9bdmhxmh57pvn9jm4z41rkvv6h60hq2lfgkapnjy7q"; depends=[bdDwC data_table DT finch knitr rgbif shiny shinyBS shinydashboard shinyjs spocc yaml]; }; bdclean = derive2 { name="bdclean"; version="0.1.15"; sha256="14cy8yaqd6bg2zyh2wvndydk9sigaydavxl4cfypqz5kqdhj82z9"; depends=[bdchecks bdDwC data_table DT finch knitr leaflet rgbif rmarkdown shiny shinydashboard shinyjs spocc]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; @@ -5333,8 +5431,8 @@ in with self; { beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.4"; sha256="18i4ygz83l60fdfkl4yg9kp5n2vmqn6yd7qkpkiplq0mzg5s4nk9"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; - beastier = derive2 { name="beastier"; version="2.0.15"; sha256="15s8n6xw0n1cbfiv5lcrbc0fa51bici0mh7wkwchh9mwziljrvs8"; depends=[ape phangorn rappdirs rJava stringr xml2]; }; - beautier = derive2 { name="beautier"; version="2.2.1"; sha256="1cp4shz8yp4hypdhg1jw1070ls7j4358lxxw4g7vz865wkdx6am6"; depends=[ape geiger seqinr stringr testit]; }; + beastier = derive2 { name="beastier"; version="2.1.1"; sha256="17qzjk4lq83khj5f04jhkr3q2w7snv4aq4zrbnsziszwnlazyqqy"; depends=[ape assertive beautier phangorn rappdirs remotes rJava stringr xml2]; }; + beautier = derive2 { name="beautier"; version="2.3.2"; sha256="0wwlv1z030mi2q895z9m9xpkfq348ka3ljyiaddzp9niappszpcj"; depends=[ape assertive geiger rappdirs seqinr stringr testit]; }; bedr = derive2 { name="bedr"; version="1.0.7"; sha256="0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.3"; sha256="061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp"; depends=[audio stringr]; }; beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; @@ -5346,8 +5444,8 @@ in with self; { belg = derive2 { name="belg"; version="1.0.0"; sha256="02n4i0kyxdxwgq7qqjqa4pwsxmmp0cksn0jrj5dvlvpflf1naicg"; depends=[Rcpp RcppArmadillo]; }; bench = derive2 { name="bench"; version="1.0.4"; sha256="1vb31jx4rwri4ywm9jlib65nn2avirvyd40af8zz5i3sl684ypg9"; depends=[glue pillar profmem rlang tibble]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; - benchmarkme = derive2 { name="benchmarkme"; version="1.0.2"; sha256="0ivrlglxnfl7cm7vww8mrnpjy2w2w4vdrkr647s3x6yfia12p07n"; depends=[benchmarkmeData doParallel dplyr foreach httr Matrix tibble]; }; - benchmarkmeData = derive2 { name="benchmarkmeData"; version="1.0.2"; sha256="1rxly627f7wbwvhli5xzz52vpabj5wa5fkx6ahl487jgs1ll7nms"; depends=[dplyr tibble]; }; + benchmarkme = derive2 { name="benchmarkme"; version="1.0.3"; sha256="003d97rs0gb6l6hq7d4lxgdngrgb5lii6fxw2n7l50m14hib2sv2"; depends=[benchmarkmeData doParallel dplyr foreach httr Matrix tibble]; }; + benchmarkmeData = derive2 { name="benchmarkmeData"; version="1.0.3"; sha256="1qiw9d93y4m2ch20hsgvf1k3r9dqf60mrdr6cc647m1qv2syjgrk"; depends=[dplyr tibble]; }; benchr = derive2 { name="benchr"; version="0.2.3-1"; sha256="1q8g9v7zbspd2gmydwwfi3avdsnmn5ahr9iybdqsicgfch5plsf5"; depends=[Rcpp RcppProgress]; }; bender = derive2 { name="bender"; version="0.1.1"; sha256="07npksrj094h884lli0fjvwjc1lhcwzlsk9wx82761mka5xajv4v"; depends=[httr jsonlite R6]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.5"; sha256="0y0c7l2r9s7lg9bw4ndcqwisa5l6a2cpydn1vmz88h3yva0l68cg"; depends=[data_table]; }; @@ -5356,7 +5454,7 @@ in with self; { ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; berryFunctions = derive2 { name="berryFunctions"; version="1.18.2"; sha256="0yicwsz6v5nffvw2wmjmc2zhcik7avz3xmj8zhb77xhaq9dazk9s"; depends=[abind]; }; bestNormalize = derive2 { name="bestNormalize"; version="1.4.2"; sha256="0df4fspcmf8scifgy2v69qlqp7zzyicjmscmyxp1m8wzd7cwzd0q"; depends=[doParallel doRNG dplyr foreach LambertW nortest]; }; - bestglm = derive2 { name="bestglm"; version="0.37"; sha256="0ghhi4g75mgq2pnkrvw188s65132i1d7v3hahnjrsnx4vrr8a9lz"; depends=[glmnet grpreg lattice leaps pls]; }; + bestglm = derive2 { name="bestglm"; version="0.37.1"; sha256="13wd1jnh9d82s4qz81k78y1v47ld0csdgn9k4izca2g039jqjxmq"; depends=[glmnet grpreg lattice leaps pls]; }; betaboost = derive2 { name="betaboost"; version="1.0.1"; sha256="1zdyzxl2kp2i5lkiz280wz4av9wqklbn25zmq6n4yb6a579yjfn8"; depends=[gamboostLSS mboost]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; @@ -5371,18 +5469,18 @@ in with self; { bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; }; bfp = derive2 { name="bfp"; version="0.0-40"; sha256="03risiq2b7bc3gwlgpcsy1gvja6n5w1j3kw13s2wrd420hddzk4s"; depends=[Rcpp]; }; bfsl = derive2 { name="bfsl"; version="0.1.0"; sha256="1hl53nis8bb1ffgkx91ij9vh680cpkb80y548y67y9w18iyd4aw4"; depends=[]; }; - bfw = derive2 { name="bfw"; version="0.4.0"; sha256="11n1f5sb4fyc18fqj838kbjh96waz9kk2fdvvakslxwvg415nxk9"; depends=[coda MASS runjags]; }; + bfw = derive2 { name="bfw"; version="0.4.1"; sha256="1dwl6p70wbgippysl7vk8nv6rc78f6h5xl8fna98zv99qf0ib31c"; depends=[coda MASS runjags]; }; bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; }; bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; }; - bgsmtr = derive2 { name="bgsmtr"; version="0.5"; sha256="1yqj3761zs64kdh63vaz6glpv65i3ji8fi51nqq8wlggak0zklnx"; depends=[CholWishart coda EDISON inline LaplacesDemon Matrix matrixcalc miscTools mnormt mvtnorm Rcpp sparseMVN statmod]; }; + bgsmtr = derive2 { name="bgsmtr"; version="0.6"; sha256="1djxkls963j97j76a15zxdx4rfhwrpis7i1wqal0v780f2c576a9"; depends=[CholWishart coda EDISON glmnet inline LaplacesDemon Matrix matrixcalc miscTools mnormt mvtnorm Rcpp sparseMVN statmod]; }; bhm = derive2 { name="bhm"; version="1.15"; sha256="1xfm1k3wf4k1c65pd9201c00y4qda3lw9aycjh6q34ixyl6g5jg5"; depends=[coda MASS survival]; }; bhrcr = derive2 { name="bhrcr"; version="1.0.3"; sha256="1w52f4ghl328vdcr8hwvmdrnxnj45fy4r21yqzg5q1fpd4mpjw2i"; depends=[AER Cairo MASS MCMCpack msm mvtnorm survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; bib2df = derive2 { name="bib2df"; version="1.1.1"; sha256="0d57883df774qqwpssmly3f1gci32yc5sgwc3x8f2rjih23s1nf6"; depends=[dplyr httr humaniformat stringr]; }; - bibliometrix = derive2 { name="bibliometrix"; version="2.2.1"; sha256="0d8mwhy792m4dp9h0gyw984qq5p8xbs1xx626w8a6jw23w6qzmxg"; depends=[dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 RColorBrewer reshape2 RISmed rscopus shiny shinycssloaders shinythemes SnowballC stringdist stringr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="2.3.2"; sha256="02sikbjnsfd1gxwlbdiafp35af22gmz2p6i951l3syxpcvylxfc8"; depends=[dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 RColorBrewer reshape2 rio RISmed rscopus shiny shinycssloaders shinythemes SnowballC stringdist stringr]; }; bibtex = derive2 { name="bibtex"; version="0.4.2"; sha256="0wl3925ryd54g1nv3ncwllc493d39dpgy5md61940h69c0van1hz"; depends=[stringr]; }; - biclique = derive2 { name="biclique"; version="1.0.3"; sha256="1jxfw0f9z916l2s9q5q7jgqfdr038ikf7ql61hzh3pw0ypnvabam"; depends=[]; }; + biclique = derive2 { name="biclique"; version="1.0.4"; sha256="0jflbl1fbi3v3igi447f8i2zs9vh84xk1rci6dmwm0k9s9zqfrs2"; depends=[]; }; biclust = derive2 { name="biclust"; version="2.0.1"; sha256="1y5n6wfa1lx88ck3x09rcg0dh3pw89225h85hmq2la1s1fpa48i0"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; biclustermd = derive2 { name="biclustermd"; version="0.1.0"; sha256="0d2fa6lainnkdzn1mq8pbxlc14hvlgfi3pcxw9rwqfjhxp6wkkig"; depends=[biclust clues doParallel dplyr foreach ggplot2 magrittr nycflights13 tidyr]; }; bife = derive2 { name="bife"; version="0.6"; sha256="1fmzmzq3hxr9kzqq5zmmsm2927vjb5mj08g2pnzljhmvsn2b7x3y"; depends=[data_table Formula Rcpp RcppArmadillo]; }; @@ -5390,10 +5488,11 @@ in with self; { bigIntegerAlgos = derive2 { name="bigIntegerAlgos"; version="0.1.2"; sha256="1cbcxwhb25ismiyr95pfgc7nq14p4srd9y8y3g3xz0ywjs0qnjy5"; depends=[gmp]; }; bigKRLS = derive2 { name="bigKRLS"; version="3.0.5.1"; sha256="1za8pxij1nwpdz3lz51zqib99pc73s92lz0k01fkcgw5rj78kgs8"; depends=[BH bigalgebra biganalytics bigmemory ggplot2 Rcpp RcppArmadillo shiny]; }; bigMap = derive2 { name="bigMap"; version="2.1.0"; sha256="0bpnzz3acqn006jk8db5yyvbhl3sq807926igjcxj813i3r0x98r"; depends=[BH bigmemory colorspace RColorBrewer Rcpp RcppArmadillo]; }; - bigQueryR = derive2 { name="bigQueryR"; version="0.4.0"; sha256="1b89yfa0gwd3frdh1z6ygxv2dfncb6g4lp67nh7hkm6r9xamfrxr"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; + bigQueryR = derive2 { name="bigQueryR"; version="0.5.0"; sha256="051c8rkj77dm78237dzhf3lcdawv0xv72pwfiim9bi89z9mp6f9m"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; bigalgebra = derive2 { name="bigalgebra"; version="0.8.4.1"; sha256="19j5f7d6yf9g0glybdwahj7n0mrgbxrbdajh7s30v25fkmm36r2z"; depends=[BH bigmemory]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; + bigassertr = derive2 { name="bigassertr"; version="0.1.1"; sha256="0jyycg9qkqswqakbc2p80s7qrv0hm3mn0zwg4v373zcf4z21rvlh"; depends=[]; }; bigchess = derive2 { name="bigchess"; version="1.5.2"; sha256="021l5pvbh6v95wavxl118k2gvlaadwr18d8f712jzarcnfi1hvy3"; depends=[ff ffbase RSQLite subprocess]; }; bigdatadist = derive2 { name="bigdatadist"; version="1.1"; sha256="16gkybwcp9sxqb0iic2fhmc4gndr44ayg14wrfcjvjaj4g5r6xs2"; depends=[FNN MASS pdist rrcov]; }; bigdist = derive2 { name="bigdist"; version="0.1.4"; sha256="1qfnmhyfadmnnagbhdl4jjrb53i1srszf19idp8fy6bczbjq85yi"; depends=[assertthat bigstatsr furrr proxy]; }; @@ -5406,7 +5505,8 @@ in with self; { bigmemory = derive2 { name="bigmemory"; version="4.5.33"; sha256="0ycl9dzm3drpyas625h34rir5bnbjlncxlvawfsfmqwcbmwdjdvj"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; - bigreadr = derive2 { name="bigreadr"; version="0.1.10"; sha256="0zp8xqjf15xahhlwrcqgr0r30dbdpvnk5ml2h4m9kw6cydkb9g7b"; depends=[data_table Rcpp]; }; + bigparallelr = derive2 { name="bigparallelr"; version="0.1.2"; sha256="1c6vw03xk4fhl5rlgajznw5rlfklsi59srncd51s24fj2avvr8ww"; depends=[bigassertr doParallel flock foreach RhpcBLASctl]; }; + bigreadr = derive2 { name="bigreadr"; version="0.2.0"; sha256="0d5fgs16kdsl23jqrgz7in63pwhh7bvj7m8pa8nj11v84ji6lagr"; depends=[bigassertr data_table Rcpp]; }; bigrquery = derive2 { name="bigrquery"; version="1.2.0"; sha256="1ggh2gngr5x0g6y7d55y6kvn94anf7qi1bkc28cjmw61hxjq38fb"; depends=[assertthat bit64 curl DBI gargle glue httr jsonlite prettyunits progress rapidjsonr Rcpp rlang tibble]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-1"; sha256="1kf04p2lglzdi1fdryk27nmj2a2jca2ii7ki8vak93sq21isb179"; depends=[quadprog]; }; bigstatsr = derive2 { name="bigstatsr"; version="0.9.1"; sha256="0v0rxp45lbv5bmvyfkm1v4l2rr7g1rfymi547y10b2zysllbfbr0"; depends=[bigreadr cowplot doParallel foreach ggplot2 Rcpp RcppArmadillo rmio RSpectra tibble]; }; @@ -5414,20 +5514,20 @@ in with self; { bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; - bigutilsr = derive2 { name="bigutilsr"; version="0.1.1"; sha256="143nvsg9xyvhmi6ky76ls00v87h41iiwy7yvpk6pqvbj7zqzs0cy"; depends=[hdpca nabor Rcpp robust robustbase]; }; + bigutilsr = derive2 { name="bigutilsr"; version="0.2.2"; sha256="19d4rj598094fncblncd0bampm19srrmczrsmwvj5njf3cxkvxdp"; depends=[bigparallelr nabor Rcpp robust robustbase RSpectra]; }; bikeshare14 = derive2 { name="bikeshare14"; version="0.1.2"; sha256="1sib83driqv9k4aa131nw3xasslrxvnxkn3mr8kxycxccky025n9"; depends=[]; }; bikm1 = derive2 { name="bikm1"; version="0.9.0"; sha256="09ibaj5nd7ql5l30z726nifym5bnmkx4nbw982p9h2440rdx0g5b"; depends=[ade4 ggplot2 gtools pracma reshape2]; }; bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; billboarder = derive2 { name="billboarder"; version="0.2.7"; sha256="02k90rhz2pawy83kp0rjzvl94s02x41a53diqfva357p8w9k6z48"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr scales]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; - bimets = derive2 { name="bimets"; version="1.4.1"; sha256="1yv6zag3jhr64hkjwliy71ac8vrg6rmpyfbcs0hbwd4zfwmzbdv7"; depends=[xts zoo]; }; + bimets = derive2 { name="bimets"; version="1.4.2"; sha256="13gv3p3mldmdwvbvivh4fx8ygmjvf0gza69gprv4z1wphb6rz7yn"; depends=[xts zoo]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; binGroup = derive2 { name="binGroup"; version="2.2-1"; sha256="0cb7j6b0s3y56mv1967awwri0kv0rf3sr3vwf9gc2zbjggxi9ffp"; depends=[partitions Rdpack]; }; binMto = derive2 { name="binMto"; version="0.0-7"; sha256="0rg9rsdy14jx7zjv60krcz1vh0sxqimsai0wynhx2sx0kydw4ngy"; depends=[mvtnorm]; }; binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; }; binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; }; - binb = derive2 { name="binb"; version="0.0.4"; sha256="11pkvw833qa9g82l6bzqxswacxkxp88aaamk2mxl694nahy1kcj1"; depends=[knitr rmarkdown]; }; + binb = derive2 { name="binb"; version="0.0.5"; sha256="1xr3y8ynz1j5hxbphnw44n0k99x66da0mibqn7kby8whqq2398ki"; depends=[knitr rmarkdown]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; bindr = derive2 { name="bindr"; version="0.1.1"; sha256="1l05fpk2yql3jka321c0bdgx6mqq9pvfrg2844lbjfpbgjkmqy3w"; depends=[]; }; @@ -5437,6 +5537,7 @@ in with self; { bingat = derive2 { name="bingat"; version="1.3"; sha256="1y68rgafipfad78yrzcygdszgy1d5q739kap06pzr78bn3i8hiwa"; depends=[doParallel foreach gplots matrixStats network vegan]; }; binhf = derive2 { name="binhf"; version="1.0-3"; sha256="1vdw2s8zddp7gad8l3c4jpmnjcc0f5wpqbrp6gp9lgp1c3qa505y"; depends=[adlift EbayesThresh wavethresh]; }; binman = derive2 { name="binman"; version="0.1.1"; sha256="0hm0h285p4v9lhrqjy8s22f1s1vmfpfla5iaycpj8vw3qb3632az"; depends=[assertthat httr jsonlite rappdirs semver xml2 yaml]; }; + binmapr = derive2 { name="binmapr"; version="0.1.3"; sha256="00vaj70zjjprgyhf7zqwcbrxlgh9sj4yskba2s3i82z7k8bvn1kh"; depends=[vcfR]; }; binnednp = derive2 { name="binnednp"; version="0.4.0"; sha256="1qswrr982x5hy2vl2fc603j98cjli9l40zzvvjy2l91p8xxrc5dn"; depends=[doParallel fitdistrplus foreach kedd mclust nor1mix Rcpp Rdpack]; }; binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; }; binomSamSize = derive2 { name="binomSamSize"; version="0.1-5"; sha256="1an6dcqsjh5r0w4kc3n6yfvvha5qhrb2i4bpf7g5ykhl3i60zfcc"; depends=[binom]; }; @@ -5445,16 +5546,16 @@ in with self; { binostics = derive2 { name="binostics"; version="0.1.2"; sha256="1izcck2dq8ay9ni1wjg426w5rj39gxwzls1sgnngggapl3pmqzz2"; depends=[]; }; binr = derive2 { name="binr"; version="1.1"; sha256="0kgk91zy7bdrhpkh9c5bi206y9hjwjwzb508i8qqmznqyxmza70r"; depends=[]; }; binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; }; - binsmooth = derive2 { name="binsmooth"; version="0.2.0"; sha256="1ln38vcjnh57jqdaaibj1hckvdvagbv6dlzrydpyyvmw11lsbksz"; depends=[ineq pracma triangle]; }; + binsmooth = derive2 { name="binsmooth"; version="0.2.1"; sha256="0izfgsjajq64n9x7lv19dscg7z39jspwa9fpvxmyxhiv3d3fz8f0"; depends=[ineq pracma triangle]; }; binsreg = derive2 { name="binsreg"; version="0.2.0"; sha256="031a794bkb9qdy51p4jgjg3hvh8ga0hwakcdrjn0hv4ls9f5gsm7"; depends=[ggplot2 sandwich]; }; binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; }; - bio3d = derive2 { name="bio3d"; version="2.3-4"; sha256="1zmswa9xs81lbrlkkgi8dvv9xpf0ynqjqwy1k36szvfb8ar9mczr"; depends=[Rcpp]; }; + bio3d = derive2 { name="bio3d"; version="2.4-0"; sha256="0ikpk1ppdp50m9kd289z616i382j9i7ji1zchyd4xqfyk8lnxf4s"; depends=[Rcpp]; }; bioOED = derive2 { name="bioOED"; version="0.2.1"; sha256="0wx58bngpzlrbbcnx8l1lqhsg51y98wcym1238p87drf64x2mj1n"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR rlang tidyr tidyselect tidyverse]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; bioRad = derive2 { name="bioRad"; version="0.4.0"; sha256="100b1fz7dxpvsc452r4yvd4g6gmzz80pvw1l0sp6g4310gyzs2fb"; depends=[curl fields ggmap ggplot2 maptools raster rgdal rhdf5 sp]; }; - bioacoustics = derive2 { name="bioacoustics"; version="0.2.1"; sha256="0yk7x2alr6sly9fnd3wg6cph8w4lpz140588zjldiz7zg97qbvvq"; depends=[htmltools moments Rcpp stringr tuneR]; }; - biofiles = derive2 { name="biofiles"; version="1.0.0"; sha256="1bglgl2jcp6jy3f7xwndil56i98xx4kn518s3fqdixw7n5ibmqd2"; depends=[assertthat BiocGenerics Biostrings foreach GenomeInfoDb GenomicRanges IRanges iterators Rcpp RCurl reutils S4Vectors XVector]; }; + bioacoustics = derive2 { name="bioacoustics"; version="0.2.2"; sha256="13m5w888fap7nxn3pwimi04zdp848n20ha01v7gkzdkchdnbbchb"; depends=[htmltools moments Rcpp stringr tuneR]; }; + biocompute = derive2 { name="biocompute"; version="1.0.3"; sha256="1c23yd0vhar1hvzskr7h6g3a78mcrwminm2pkdmc9qlpy8s8smvv"; depends=[cli crayon curl digest httr jsonlite jsonvalidate magrittr rmarkdown stringr uuid yaml]; }; biogas = derive2 { name="biogas"; version="1.10.3"; sha256="1qfidjwhaxg5zplzkldhj4zqg81xrcqmvh9x5km5yhyymzr6y4vs"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; biogram = derive2 { name="biogram"; version="1.4"; sha256="1kkim6dxmvvpby2ir280adl14jmrz7nsib3m8g2ki81d539km6il"; depends=[bit combinat entropy partitions slam]; }; @@ -5469,7 +5570,7 @@ in with self; { bioset = derive2 { name="bioset"; version="0.2.3"; sha256="15vchim8cim42j1if0jars696rh50vmbggr9748q321f6ngm1w1i"; depends=[dplyr magrittr rlang tibble tidyr]; }; biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; biospear = derive2 { name="biospear"; version="1.0.2"; sha256="10y4hbncwiqpxzqvzjrmfgp804zczdgvwpjcj0dzaa0sx1njdzja"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; }; - biostat3 = derive2 { name="biostat3"; version="0.1.3"; sha256="1m9fk8il3hrq4npba44c6x55p1dsjf6cijzris2ffgdq9wrb7l22"; depends=[car MASS muhaz survival]; }; + biostat3 = derive2 { name="biostat3"; version="0.1.4"; sha256="12inmmy5xjd0c6vs2s00z13rm5ykndxpmmgi8h7pkw30rhq4snyc"; depends=[car MASS muhaz survival]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; biotools = derive2 { name="biotools"; version="3.1"; sha256="15y3ccmj1gslzc0lp0gvc66hf0yigx3zkqnw46crgrizjm2kmjay"; depends=[boot lattice MASS rpanel SpatialEpi tkrplot]; }; bipartite = derive2 { name="bipartite"; version="2.13"; sha256="11l8lialvb02wwk6q81sq0i48v422rcvxxbkz74la820a2qzdwcx"; depends=[fields igraph MASS permute sna vegan]; }; @@ -5501,8 +5602,8 @@ in with self; { blackbox = derive2 { name="blackbox"; version="1.1.27"; sha256="1mpxil8fr56xiy64177s6m16pygfsr6i1bn4crvnhypz9197in8c"; depends=[foreach geometry lattice MASS nloptr numDeriv pbapply proxy rcdd Rcpp RcppEigen spaMM]; }; blaise = derive2 { name="blaise"; version="1.3.4"; sha256="14jk62sw4xs0yip8gh1w2795l8p0ybv83c24ijizxymg16h7i9g7"; depends=[dplyr readr stringr tibble]; }; blandr = derive2 { name="blandr"; version="0.5.1"; sha256="1rqas71hlf000b3z824d8ljshf8bx91bbrzaxxnx5n3chv19w6z6"; depends=[ggplot2 jmvcore knitr R6 rmarkdown stringr]; }; - blastula = derive2 { name="blastula"; version="0.2.1"; sha256="1w9g858c6p7qzv86pfndycvpgv6k63r85wlq11249mi2zqzvh7rl"; depends=[commonmark downloader dplyr ggplot2 glue htmltools httr magrittr stringr tidyr]; }; - blavaan = derive2 { name="blavaan"; version="0.3-7"; sha256="16r838lc93a5lg4brvdyx7ghb4k2p896azmgnfschj1rw3xdlf3q"; depends=[bayesplot BH coda future_apply lavaan loo MCMCpack mnormt nonnest2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; + blastula = derive2 { name="blastula"; version="0.3.1"; sha256="0vanb8ghzskicnk7gw7mw67790lw953jf3jgyyhd71qdgz6wjli7"; depends=[base64enc commonmark curl dplyr fs getPass here htmltools httr jsonlite magrittr mime rlang rmarkdown stringr uuid]; }; + blavaan = derive2 { name="blavaan"; version="0.3-8"; sha256="0sspwr2pfm5an8lg3xwgmq45nxv39yll66bkgk0qjdbfxb2zhzzx"; depends=[bayesplot BH coda future_apply lavaan loo MCMCpack mnormt nonnest2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blin = derive2 { name="blin"; version="0.0.1"; sha256="1h94azm7gli9i4v3li5c1p36p3rkcj2p5j6rqzlzf0pcqs0bsc09"; depends=[abind glmnet MASS Matrix mvtnorm]; }; @@ -5520,9 +5621,8 @@ in with self; { blockmodeling = derive2 { name="blockmodeling"; version="0.3.4"; sha256="11v9903y9dwlzaqp8sx0fsibcg82phvappddy37r8lnxd4vchsd2"; depends=[doParallel doRNG foreach Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="3.5"; sha256="04bsax0f3q332920xllbxawz49wr8k4cwlizp649gpz82a2rs7zd"; depends=[crossdes lme4 plyr]; }; - blockseg = derive2 { name="blockseg"; version="0.5.2"; sha256="1i2c9prr51ak6vrdh5gzxlwkdmmky1sj71b4m12khrizigbqgysa"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 shiny]; }; - blogdown = derive2 { name="blogdown"; version="0.16"; sha256="12gjwkrif1qnvjkzcfr9kcnlgzrk3k51anf5hdr39vjhq94bk88q"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; + blocksdesign = derive2 { name="blocksdesign"; version="3.8"; sha256="1vjx94i3n63hzs9nx0gs9cjc4947lrgq9ld60cxjrdsgk53f53s5"; depends=[lme4 plyr PolynomF]; }; + blogdown = derive2 { name="blogdown"; version="0.17"; sha256="1ijfskdl9apvs95km2f7p2m1imcbxvqxd8wkp3rdmgfs73pfk33r"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; blorr = derive2 { name="blorr"; version="0.2.1"; sha256="1lvh5jr1jidrkwidpy6plzd58p8q3rxa23wl4xsf8milw180w69p"; depends=[car caret checkmate cli clisymbols crayon dplyr e1071 ggplot2 glue gridExtra magrittr purrr Rcpp rlang scales shiny tibble]; }; blrm = derive2 { name="blrm"; version="1.0-1"; sha256="0p0nmbxil4l89fcryrgsg9mxzb5fyg93p50aqkjy00ms05hwd0hx"; depends=[boot mvtnorm openxlsx reshape2 rjags]; }; blsAPI = derive2 { name="blsAPI"; version="0.2.1"; sha256="0p45g4qqaialh5m9bxgrvnc7nqmm0429syw0bml8h4h8vy4014a7"; depends=[httr rjson]; }; @@ -5539,7 +5639,7 @@ in with self; { bmotif = derive2 { name="bmotif"; version="1.0.0"; sha256="1zjwlsimihszg8gg7mvvi8xmzvlsdph9x6524gb28jmd24xb4gwj"; depends=[tensor]; }; bmp = derive2 { name="bmp"; version="0.3"; sha256="0jd67r11bn98hjwgyr6gas423787xy7ji2hq7ay80blkkcj91xxx"; depends=[]; }; bmrm = derive2 { name="bmrm"; version="4.1"; sha256="1brdd5mhr5282wkdc62lgsqcxw077p69rknjk7fjcs282ahcik2s"; depends=[LowRankQP lpSolve matrixStats Rcpp]; }; - bnclassify = derive2 { name="bnclassify"; version="0.4.2"; sha256="1x7rf54zrls1gwxybmn51c071kd62d2gxczlnihcfxj3hw1b27bh"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; + bnclassify = derive2 { name="bnclassify"; version="0.4.3"; sha256="1bh1l57xzbj6cj21lslxw5b79x3jmm2wyv24smdyrgyi8s6mvj7v"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; bnlearn = derive2 { name="bnlearn"; version="4.5"; sha256="0y452cw1dxm1cik4na1zq6g0zv5ybiwc1cq9sdashq1jacjpc158"; depends=[]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; @@ -5554,9 +5654,9 @@ in with self; { boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; bold = derive2 { name="bold"; version="0.9.0"; sha256="0ppdhbpdffvs0sgh7ykkhr585nhk66w6vqw793wa4ia57yl49s25"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; bomrang = derive2 { name="bomrang"; version="0.6.0"; sha256="0lnrv274lhl4n9rngkwx63dgd765bv0bd0mq9gz0vh8msmxnih0z"; depends=[crayon curl data_table dplyr foreign hoardr httr janitor jsonlite lubridate magrittr raster readr rgdal rvest tidyr xml2]; }; - bookdown = derive2 { name="bookdown"; version="0.14"; sha256="1jiq2d292y0l3f4npyfzfpnmb0sqxsl212kkjfbjg5301h0na762"; depends=[htmltools knitr rmarkdown tinytex xfun]; }; + bookdown = derive2 { name="bookdown"; version="0.16"; sha256="1gwgvx1yg6q3wccnhidr3gshdvlgr42i4pvlg4h29kpsa7smjiv1"; depends=[htmltools knitr rmarkdown tinytex xfun]; }; bookdownplus = derive2 { name="bookdownplus"; version="1.5.7"; sha256="1y3iiw3grs6h3ppar1yjmha0nbp19naiirj0hvzgi4yhnibf7nid"; depends=[bookdown knitr magick xaringan]; }; - boostmtree = derive2 { name="boostmtree"; version="1.3.0"; sha256="0q1lgjvbc15m2gygnmh63m0wy2c6x25iwrh9cbn0baq598hnr7j9"; depends=[nlme randomForestSRC]; }; + boostmtree = derive2 { name="boostmtree"; version="1.4.1"; sha256="16adb9akrdw1cfcarrv9l5cxhn1nzskir6nwl9nawl1r727s57z6"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-23"; sha256="0bx07zbb5nfz2xfgnzbspg7r5vxz4bjdz1ry4d1vk434vlcrxj1h"; depends=[]; }; bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; @@ -5575,27 +5675,27 @@ in with self; { boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; bor = derive2 { name="bor"; version="0.1.0"; sha256="1r5jacmin0cq9zipxa9nmp3jnh6wsddd4wnzw2n5sggnf24ryp8g"; depends=[]; }; boral = derive2 { name="boral"; version="1.7"; sha256="0li7jdzgq2ffhrf0nly96syp72vv3c6rbcni19kk2wgyv16mjwcm"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; - borrowr = derive2 { name="borrowr"; version="0.1.0"; sha256="0va4sp1xc91qfrzxlbqq499npn50azhw6cdr4ra3aamin54n9pgk"; depends=[BART mvtnorm Rcpp]; }; + borrowr = derive2 { name="borrowr"; version="0.1.1"; sha256="0q9lkdzf7v9rggrwcny551cx7lfqli60dxqgqx0d2x819d7h0k1d"; depends=[BART mvtnorm Rcpp]; }; bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; + botor = derive2 { name="botor"; version="0.2.0"; sha256="13lyw6pmz923vdkyaa9n623h134kq0n5gb6qi8bpx8rhq2sycbdb"; depends=[checkmate logger reticulate]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; boxcoxmix = derive2 { name="boxcoxmix"; version="0.21"; sha256="0pav4nksh1zbic11l38jyyq8i58hfvwzkp88ra6nny3jn2axzipl"; depends=[npmlreg qicharts statmod]; }; - boxoffice = derive2 { name="boxoffice"; version="1.2.2"; sha256="0p3n3x2wf7c3yl5pqgpxk23lqmgv6mp1984liy30c594j9n011pq"; depends=[httr rvest]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.3.0"; sha256="1y1b45q69sxbszd83s8ch10z4i55h34ixm8q7yxr7byx3px8y65n"; depends=[]; }; - boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; + boxr = derive2 { name="boxr"; version="0.3.5"; sha256="1mhw3val08l03y7c52kq6ln2l5gjn6x1mxg0hx7nr8b86skbrka4"; depends=[assertthat bit64 digest dplyr fs glue httpuv httr mime rio rlang stringr]; }; bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; bpbounds = derive2 { name="bpbounds"; version="0.1.3"; sha256="1lqhrvd7hf8ryij5rf7zrcqc3k89bj1665x81m9rn7dixk7qlb6h"; depends=[]; }; bpca = derive2 { name="bpca"; version="1.3-0"; sha256="16a7b94nk5psnm435vrwilcsria9mhr5d31fwzxy53pzp8n78kcr"; depends=[rgl scatterplot3d]; }; bpcp = derive2 { name="bpcp"; version="1.3.4"; sha256="0l4x3n7lcwinnrh2sy386grisj1x7k1d5hll1k4bljg01p7lb475"; depends=[]; }; bpgmm = derive2 { name="bpgmm"; version="1.0.5"; sha256="0dxyrcf1qyf3ymj36d9flaw8405m7c1cqxbv6yrqm2dhba0ymyxq"; depends=[gtools label_switching MASS mcmcse mvtnorm pgmm Rcpp RcppArmadillo]; }; bpkde = derive2 { name="bpkde"; version="1.0-7"; sha256="1ls6rwmbgb2vzsjn34r87ab8rnz3ls61g6f4x3jpglbk0j91f0h8"; depends=[]; }; - bpnreg = derive2 { name="bpnreg"; version="1.0.0"; sha256="0mpwrhbbbw8m3cz0fl0x9j9m3n9zfdamnw83mmg4bjd0wmxkkm90"; depends=[BH haven MASS Rcpp RcppArmadillo]; }; + bpnreg = derive2 { name="bpnreg"; version="1.0.1"; sha256="1nz3adhalhrr04yimsr6ybpw4hvl018sz3ynwcggpprpy92xwha9"; depends=[BH haven MASS Rcpp RcppArmadillo]; }; bpp = derive2 { name="bpp"; version="1.0.0"; sha256="11fgn92vvl7kklv0xdisf8gnf2rbhq11qyckqsxvc5wa821lmnkm"; depends=[mvtnorm]; }; bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; braQCA = derive2 { name="braQCA"; version="1.0.0.1"; sha256="1chyy8sk3iqs54sqg79dp1vjz3gcvnbzqbmgasdynir38b45scjh"; depends=[bootstrap dplyr QCA]; }; bracer = derive2 { name="bracer"; version="1.1.1"; sha256="1l722jg88i4898v8fwb9klwl9mbpaz1phypbpqc1j2kp2n2vq0vb"; depends=[stringr]; }; braidReports = derive2 { name="braidReports"; version="0.5.3"; sha256="107c9lrzb55dw5pal8qqpn8is3nrh19vfngx3zcfpmc49f06kskq"; depends=[braidrm ggplot2]; }; braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; }; - brainGraph = derive2 { name="brainGraph"; version="2.2.0"; sha256="10bqlwrhqjzj1bqv8r77rrqjrxqbwfmzyand47bv4vb00g1wyq3x"; depends=[abind ade4 boot data_table expm foreach ggplot2 ggrepel gridExtra Hmisc igraph MASS Matrix mediation oro_nifti permute RcppEigen scales]; }; + brainGraph = derive2 { name="brainGraph"; version="2.7.3"; sha256="1r39hxjix7vf3x8w46cgrpxfzsjkyw1k2r34xw73rvb75xx0aaay"; depends=[abind ade4 boot data_table expm foreach ggplot2 ggrepel gridExtra Hmisc igraph MASS Matrix oro_nifti permute RcppEigen scales]; }; brainKCCA = derive2 { name="brainKCCA"; version="0.1.0"; sha256="1ag3qahlba4h4126873hg2bbi6sr729mhiw22gjgr4g4jg6lhh09"; depends=[brainR CCA elasticnet kernlab knitr misc3d oro_nifti rgl]; }; brainR = derive2 { name="brainR"; version="1.5.1"; sha256="0ih4vwy445ciyyvf8snm42vg7rzzf6vn9qkbhj0yyd8sy88mgyss"; depends=[misc3d oro_nifti rgl]; }; brainwaver = derive2 { name="brainwaver"; version="1.6"; sha256="0r79dpd9bbbn34rm29512srzj3m29qgvbryvrp1mwv8mmcsh6ij6"; depends=[waveslim]; }; @@ -5612,7 +5712,7 @@ in with self; { breathteststan = derive2 { name="breathteststan"; version="0.4.7"; sha256="0lvyp3524cha6ckfx2c25829ys1g97xhjc3mi5cmdbfg8zfgcy58"; depends=[BH dplyr purrr Rcpp RcppEigen rstan rstantools StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brglm = derive2 { name="brglm"; version="0.6.2"; sha256="0c9ngscc6zlfm90fqyggnj04qfkhp5qgf5q3wnfpxwyc8cm47by2"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.5.1"; sha256="1vjgy9vxcx1n8syb04ck5sa4wnc4klrpyl8pk4ywkxzjflayh8ca"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; + brglm2 = derive2 { name="brglm2"; version="0.6.0"; sha256="1955fqnw97hn9r2q15a06xn80ijbrkfkxjihq91dfj82mb38fqyv"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; bridgesampling = derive2 { name="bridgesampling"; version="0.7-2"; sha256="0kd4p5pz46vssjb8faxwy5nv6r403a89h8hylxhq50n2rj94x934"; depends=[Brobdingnag coda Matrix mvnfast scales stringr]; }; @@ -5625,13 +5725,13 @@ in with self; { broman = derive2 { name="broman"; version="0.69-5"; sha256="1y1l1p0ddy4a3vwa01yhrc5zcgnl673ar9prkn89pspbdab7km2s"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; broom = derive2 { name="broom"; version="0.5.2"; sha256="0qmclih5dm5sqzy4hplcfy677kr12pm9pnpv3r319g14dd27pbqn"; depends=[backports dplyr generics nlme purrr reshape2 stringr tibble tidyr]; }; broom_mixed = derive2 { name="broom.mixed"; version="0.2.4"; sha256="176817l4d31xbi7yfsjlw287va2wjllxizhi5z3p7x5mi7fkyv2c"; depends=[broom coda dplyr nlme plyr purrr reshape2 stringr tibble tidyr TMB]; }; - broomExtra = derive2 { name="broomExtra"; version="0.0.5"; sha256="1hfh0yc94919llmzapvp0khglc2n5w6rkgpr5h1r4nww2ikr7v6p"; depends=[broom broom_mixed dplyr magrittr purrr rlang rsample tidyr]; }; + broomExtra = derive2 { name="broomExtra"; version="0.0.6"; sha256="0wnis18nm11kkb198rqr8179mr9vfrb7hwn5v9dy2sqwbf47ncc6"; depends=[broom broom_mixed dplyr magrittr purrr rlang rsample tidyr]; }; brotli = derive2 { name="brotli"; version="1.2"; sha256="07rgdgxh9bvn0qavpclxmkglwyl6ndqasxcs6j12if698dkn976b"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.5.0"; sha256="07dxynk8pbpbsqwaxg9vhpjv4wx8mb1lqxy1nkczjayn1yrpjfm5"; depends=[ape conditionz crul curl phylocomr phytools taxize]; }; brt = derive2 { name="brt"; version="1.3.0"; sha256="13fn2mv66fys7w0xchh69sb6jggg5c2imk1psi3mlr1902m6ss5m"; depends=[ggplot2]; }; brunnermunzel = derive2 { name="brunnermunzel"; version="1.3.5"; sha256="0pam2a17vj62a8as7a9lhk29wpd0chan8g7rx296da481n5r5w6b"; depends=[]; }; - bs4Dash = derive2 { name="bs4Dash"; version="0.4.0"; sha256="192fpy4qbra264smv9xqdzmm9wx86gm0k7bpaapjlpb30lb4izh3"; depends=[htmltools shiny]; }; + bs4Dash = derive2 { name="bs4Dash"; version="0.5.0"; sha256="1y75i6bsdy1bsbzwjblsnimw1zzk0zl3qnzqfq9zcnf6q2ghi3r2"; depends=[htmltools shiny]; }; bsam = derive2 { name="bsam"; version="1.1.2"; sha256="1m2lpqm2i4i35hzr1iylrb8skx8rsys3w542xjyqw030bs7b1rdk"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; bsamGP = derive2 { name="bsamGP"; version="1.2.2"; sha256="1r7jmrj91na9718digggsjqfqc2l0s0md68vr3s9xcb77c4bbhyi"; depends=[ggplot2 gridExtra MASS]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; @@ -5648,6 +5748,7 @@ in with self; { btergm = derive2 { name="btergm"; version="1.9.4"; sha256="17bjd1d2yj1l98mbflklznxd3q7zi5nzj943nxzva7ij3hdsn6l4"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet_common xergm_common]; }; bucky = derive2 { name="bucky"; version="1.0.5"; sha256="0xn92dnhrs8810f8kvn2dnig0icd1k4dkxljmldij6dn8xb7c85q"; depends=[lmtest sandwich]; }; buildmer = derive2 { name="buildmer"; version="1.3"; sha256="0iv0819vaax7yy2p9cyrhj507n3zr681w7ks81y2b07n8mra0ylz"; depends=[lme4 mgcv plyr]; }; + bujar = derive2 { name="bujar"; version="0.2-7"; sha256="1r14mh5j2w87mc6b192hi4qg97si2xv6v826j6c1awh7w3vqbbr9"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms survival]; }; bulletcp = derive2 { name="bulletcp"; version="1.0.0"; sha256="1k7lw8gflih47ncz8hgsj0sxbajnkhz1k7yb7rwbdnzcki3n3jln"; depends=[assertthat dplyr mvtnorm Rdpack]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; }; @@ -5664,13 +5765,12 @@ in with self; { bvartools = derive2 { name="bvartools"; version="0.0.2"; sha256="16wa2bnm91764xspgvswvl3ylv0s3x5f734scw9x0zjy9q72b05h"; depends=[coda Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; bvls = derive2 { name="bvls"; version="1.4"; sha256="18aaf7kk5mks3a59wwqhm1ckpn6s704l9m5nzy0x5iw0s98ijbm2"; depends=[]; }; - bvpSolve = derive2 { name="bvpSolve"; version="1.3.3"; sha256="1q5sh3kj1c07zq7mx8sh4ggp1fvwh86394qrc3ildj4wrbakmzib"; depends=[deSolve rootSolve]; }; bwd = derive2 { name="bwd"; version="0.1.0"; sha256="1ryd5cqbpns9dsis2a9vjg6fcg23284c3dr3j3l18krdshdksfr0"; depends=[]; }; - bwimage = derive2 { name="bwimage"; version="1.0"; sha256="0qh5qhcp8fm2d39dk4637biphv6rc6i687h5pip7ydp5f5bvgz77"; depends=[jpeg png]; }; + bwimage = derive2 { name="bwimage"; version="1.2"; sha256="1wm17spxfrgf8kfc6fadri54sdk0b9813s9y4rp2xiwmy5sp6aj2"; depends=[jpeg png]; }; bysykkel = derive2 { name="bysykkel"; version="0.2.3"; sha256="1cbfmmmw7a37fwgwgfvc8yqxl4dh5n30qcnva9wsm903wccmb2cr"; depends=[glue httr jsonlite lubridate magrittr tibble]; }; bytescircle = derive2 { name="bytescircle"; version="1.1"; sha256="0c83d37kijcvr00pc4qqdci14cpbg6988izyjfjk1yliavyc6mwf"; depends=[]; }; bzinb = derive2 { name="bzinb"; version="1.0.3"; sha256="1n5ga5v6v71cgrgga5jlhmxs0s62pz93lsp3x8qz6vg042m5dl0s"; depends=[BH Rcpp]; }; - c060 = derive2 { name="c060"; version="0.2-4"; sha256="1yzy0p6041rygqfwzb8dpyc7jq12javmhlvdcmmc7p59bbk7wv3j"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; + c060 = derive2 { name="c060"; version="0.2-5"; sha256="1862lic0vvidbd7s63j65iz4rf70d5337l80vvrbgv8d7fhnxz0y"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; c14bazAAR = derive2 { name="c14bazAAR"; version="1.0.3"; sha256="1fnsaadnam8njj1gskz26j71jd3n229y61psk3scnbrr5fyawlhh"; depends=[crayon data_table dplyr httr magrittr pbapply rlang tibble tidyr]; }; c212 = derive2 { name="c212"; version="0.95"; sha256="1cgmldy2ysz3934fxh0mmzrb2vw33j3pmws53ng7yxg79mb9ixja"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; @@ -5683,17 +5783,19 @@ in with self; { cPCG = derive2 { name="cPCG"; version="1.0"; sha256="1pfbsv2rcjsryn6nr56a7i4yb7k0m3gdfn4q9l1kpzhmv9lic7m1"; depends=[Rcpp RcppArmadillo]; }; cRegulome = derive2 { name="cRegulome"; version="0.3.1"; sha256="0j3rv7vakv27r1n1yxmd50nlnyc4y329w0dmrw56dwkdkk4zzbsg"; depends=[DBI ggplot2 ggridges httr igraph R_utils RSQLite UpSetR VennDiagram]; }; ca = derive2 { name="ca"; version="0.71"; sha256="1ywqvj0rc9ss7yim4x09yf6l80xz4y6ggl56m0c1hc9x6wxna7h2"; depends=[]; }; - caMST = derive2 { name="caMST"; version="0.1.0"; sha256="1xb8ka2r729sqwxhxh5qj4girh0va0faqjv1jsyn3hlbijcz78jj"; depends=[catR mstR]; }; + caMST = derive2 { name="caMST"; version="0.1.2"; sha256="1prs9xrva3wk7d5k13a4vxgjdv5vw1ybymprp21v97h199qsnarp"; depends=[catR diagram mstR]; }; caRamel = derive2 { name="caRamel"; version="1.1"; sha256="06nppjx66xwdqchna5j6xlhfzs5g36nv8srwivbnfixys29awabb"; depends=[geometry]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; - caTools = derive2 { name="caTools"; version="1.17.1.2"; sha256="0svj31y7h8vimvliygmmbl7pk850qk80k1vn38mlcxsnmcpm9k39"; depends=[bitops]; }; + caTools = derive2 { name="caTools"; version="1.17.1.3"; sha256="04m7vbydxb1nipday97w29p2miykyzxw572j9lda6jxmmp2kb1yp"; depends=[bitops]; }; + cabinets = derive2 { name="cabinets"; version="0.3.1"; sha256="1f6pkh2vpnqdqhbd6ipy5553xh7bppc7y7xbz9lw27wn5fppilzl"; depends=[crayon fs glue here purrr R6 rjson rstudioapi stringr usethis withr]; }; cabootcrs = derive2 { name="cabootcrs"; version="1.0"; sha256="0a6y04jq837k1pk8b9nhgz7rima7s8jid6vdjyfvrqshgaiabg1q"; depends=[]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; caesar = derive2 { name="caesar"; version="1.0.0"; sha256="0z1bb5cmjr97l3h9svy4r4bj58jkmq6kdkip577cvy2xf5q9n410"; depends=[binhf]; }; caffsim = derive2 { name="caffsim"; version="0.2.2"; sha256="00bkgmmqrydpji2pvhcchgl2p8w5ksby4g80i3h76q0bm2325w9h"; depends=[dplyr ggplot2 markdown mgcv shiny tibble tidyr]; }; - cairoDevice = derive2 { name="cairoDevice"; version="2.27"; sha256="0hhzndaqcpkdfbvrsfp54k8bl82wffmp0s0689vd7zhwxvp7l3wg"; depends=[]; }; + cairoDevice = derive2 { name="cairoDevice"; version="2.28"; sha256="14885gpmhdzmxbz3q59s5sd3kjkyi5yf9lpnjwmvc482n8ix4lpq"; depends=[]; }; calACS = derive2 { name="calACS"; version="2.2.2"; sha256="0a53k2rzyjksb0ypr5zrask4a6mgiyrqx0l2z3lm218y8pk2jf1w"; depends=[]; }; calcWOI = derive2 { name="calcWOI"; version="1.0.2"; sha256="09g96inaayp0brbxw75l7k1cqn50f7qw0glb2g04657zmlk16i52"; depends=[LS2W wavethresh]; }; + calculus = derive2 { name="calculus"; version="0.1.1"; sha256="1haviqraiil5cx6sy2zlkxlspvv1vx6qn1jji77ma4yhd2xzs1gk"; depends=[Rcpp]; }; calendar = derive2 { name="calendar"; version="0.0.1"; sha256="18ha6vpx2bpk8p08hajiq2d201fbqhzcycp8ks6wrr06fy04z689"; depends=[lubridate tibble]; }; calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.5"; sha256="1s423nr176l2sc66wp7hzgqkv7c2bq8d2bjrrvrrm5qa9y3zdx1k"; depends=[MASS]; }; @@ -5709,20 +5811,20 @@ in with self; { cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="0.1.2"; sha256="0lc31vw49sc2zsrn52aqqljcc4n79j4i4845sr201ga67w07vrrb"; depends=[CHNOSZ xtable]; }; - cansim = derive2 { name="cansim"; version="0.3.2"; sha256="11s4kx4pjbl62ishwgkm9d9l9mqiy0nlw2l7jp4h486qnb27s1vl"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; + cansim = derive2 { name="cansim"; version="0.3.3"; sha256="17rhhqzs49zhgkhcdi4xq7cgj4hb6900bxvw43nbwqr3gcif1wpq"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; canvasXpress = derive2 { name="canvasXpress"; version="1.24.8"; sha256="1sxhxddl9fdvxs1hdn5b03jg0sp8wgpfli9v0p2n381lq1z30m3s"; depends=[htmlwidgets httr]; }; cap = derive2 { name="cap"; version="1.0"; sha256="1pv8hskxjbp589dn7rx80yaa1ld76x1w37bss2fyrys1p3qr78aa"; depends=[MASS multigroup]; }; cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; }; caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; - capitalR = derive2 { name="capitalR"; version="1.2.0"; sha256="1mclb0hx7ajr0gmmj7pn55zdqrd659dd5xgb3nzkp4yrqgfbv2bm"; depends=[]; }; - capm = derive2 { name="capm"; version="0.13.10"; sha256="19lz1nnil0s37r089k3bc2c5jpav03dbvwk9w3brh4zls7w4qypf"; depends=[circlize deSolve dplyr FME ggplot2 magrittr sf survey tidyr]; }; + capitalR = derive2 { name="capitalR"; version="1.3.0"; sha256="08lvncia9mdrnw84zydf1k7336xawiirh2swziqfwx3z1n172n52"; depends=[]; }; + capm = derive2 { name="capm"; version="0.14.0"; sha256="0c3rnc1qd9c4v0jj8ihg6bdhpqvfnpafkqyqkar6fwnlvgw48z83"; depends=[circlize deSolve dplyr FME ggplot2 magrittr sf survey tidyr]; }; capn = derive2 { name="capn"; version="1.0.0"; sha256="14vfk00xyx0az3whmxjpcv1785lf0gx81w7qc54i3wcfp3i22kcr"; depends=[]; }; captioner = derive2 { name="captioner"; version="2.2.3"; sha256="0xg72pmgm84f0v45phfwxpsslhf12nhn1swmrj1yifj7g9sjvybj"; depends=[]; }; captr = derive2 { name="captr"; version="0.3.0"; sha256="13j2nq9hm37g4h5fjdpz7kix0sqajdd7zssjfgil06ixfmnsijkx"; depends=[curl jsonlite]; }; capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="3.0-3"; sha256="0vy3g3bjljd2al8xb9qr45f98is7yppc9jilqn7b6zvf5yqpr07s"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; - carData = derive2 { name="carData"; version="3.0-2"; sha256="152lfgaspgx6x2wzdb5p3zv6r87a0d2pg10h6fjmdr613kzlwp1v"; depends=[]; }; + car = derive2 { name="car"; version="3.0-5"; sha256="0w7fm81pn0wqrwzbjyddnrkpjl8gavg7ijh7rab9f21rkgkzgm3y"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; + carData = derive2 { name="carData"; version="3.0-3"; sha256="0cg2yxzn0pdjqykr60my1fzpfkqac21fll5hv3m9w5c9sayq8swq"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; carbonate = derive2 { name="carbonate"; version="0.1.2"; sha256="1v4ssdk7j60sm4iahywb4x710ijvzj0yczcmr75zvq9rjfki1b54"; depends=[clipr httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; @@ -5748,12 +5850,12 @@ in with self; { casebase = derive2 { name="casebase"; version="0.1.0"; sha256="0216qzyxv44cl9f806lal9lx4n0zzr9csx8ggyjva04h5iiqrq6w"; depends=[data_table ggplot2 survival VGAM]; }; casino = derive2 { name="casino"; version="0.1.0"; sha256="07fphn46718gr1zm0xr43mwv7yk697xrc40lxxin315cf3gm0cka"; depends=[crayon dplyr ggplot2 magrittr purrr R6 tibble tidyr]; }; cassandRa = derive2 { name="cassandRa"; version="0.1.0"; sha256="0rwqzxbflxn1iyggm3mq6pkbl61mhk4vdwqwzlwrhrvvr2ib236r"; depends=[bipartite boot dplyr ggplot2 magrittr purrr reshape2 tidyr vegan]; }; - castor = derive2 { name="castor"; version="1.4.3"; sha256="14lh14im15fqc9yrc3is9fxlwsfiji5jbkwg1gjsz35zlq2b2lw7"; depends=[naturalsort nloptr Rcpp]; }; + castor = derive2 { name="castor"; version="1.5.0"; sha256="1fdfprp03ddslypqkclnv4i9cbk92d4qiqy3qx8bnv8gly76n40s"; depends=[naturalsort nloptr Rcpp]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; cat_dt = derive2 { name="cat.dt"; version="0.1.0"; sha256="1rxq1kaw03c7m2jz4n6v5x4l9fiaqahdrvh9624zapf9mfhky0lm"; depends=[Matrix Rglpk]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; catR = derive2 { name="catR"; version="3.16"; sha256="1w39dxfzqk065v64qzmfamx8p1njsv13a461s6clagbqmhysmzbx"; depends=[]; }; - catSurv = derive2 { name="catSurv"; version="1.0.3"; sha256="1qjmjdmc81inim5kpwh4k2r3cffmkyp2wpcqqzv731hciqrad8a8"; depends=[BH ltm Rcpp RcppArmadillo RcppGSL RcppParallel]; }; + catSurv = derive2 { name="catSurv"; version="1.1.3"; sha256="11j4girw99wj0l3b022kkgjcsww99dwpn3hpwzyxxd54cr55bbip"; depends=[BH jsonlite ltm plyr Rcpp RcppArmadillo RcppGSL RcppParallel]; }; catch = derive2 { name="catch"; version="1.0"; sha256="16gdjrmlsnpyc38fihggj6c7wpgpmf4phcwrimnncdhwlk038yn8"; depends=[MASS Matrix tensr]; }; catchr = derive2 { name="catchr"; version="0.2.1"; sha256="00h7gizv90zq78a80pqvp78f2l55xxnmya2g275pj84dqj1g9pfb"; depends=[purrr rlang]; }; catcont = derive2 { name="catcont"; version="0.5.0"; sha256="0ix6ipm3nn9aq5vxirjga2kwwfnxn4v8ggfjlg5v9027v2r8rb96"; depends=[dplyr]; }; @@ -5762,7 +5864,7 @@ in with self; { cate = derive2 { name="cate"; version="1.1"; sha256="1mw4h03gbrrf69jhw3g8a761gxrz2i7aiqdb0vc1dv75pkjspwmj"; depends=[corpcor esaBcv leapp MASS Matrix ruv sva]; }; catenary = derive2 { name="catenary"; version="1.1.2"; sha256="1n64kq3lkaf00a2mghs67hnxvi4dp6g12pwifyx0bd418wkw9wf3"; depends=[boot broom dplyr ggplot2 tidyverse]; }; catfun = derive2 { name="catfun"; version="0.1.4"; sha256="1482rll333fvy4h58f15flfs7qrck3vk9bzpdn3hayhnmc7svmma"; depends=[broom cli DescTools epitools Hmisc magrittr rlang]; }; - catlearn = derive2 { name="catlearn"; version="0.6.2"; sha256="0b038qgx6jksshi68iin1wwi66hng1fdbcr8dg7q6nqmx78bhc3k"; depends=[doParallel dplyr foreach Rcpp tidyr]; }; + catlearn = derive2 { name="catlearn"; version="0.7.1"; sha256="194gqx94wkl4zr01ms5g684ma328q35cfqpwa63jv98scrybrbwj"; depends=[doParallel dplyr foreach Rcpp tidyr]; }; catmap = derive2 { name="catmap"; version="1.6.4"; sha256="18449qh10jxfi8p49gmbnib5y013nfdgdblbs4n0mfs0nnzb10sx"; depends=[forestplot metafor]; }; catnet = derive2 { name="catnet"; version="1.15.5"; sha256="1mwhchja3k9mrhclg6janxsjjs4x20ppg3gx6jymfai2bdv23azh"; depends=[]; }; catseyes = derive2 { name="catseyes"; version="0.2.3"; sha256="1p0jnjjfl1jqqqk8q6yfsxrh30idfbss7v6lrrm25x8zrhxah0ww"; depends=[]; }; @@ -5780,7 +5882,7 @@ in with self; { cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; cblasr = derive2 { name="cblasr"; version="1.0.0"; sha256="1bz8d4124qpja4bvzn6k1swi89cfyrcpwg2nwyj4r8y0m1hbpc71"; depends=[Rcpp]; }; cbsem = derive2 { name="cbsem"; version="1.0.0"; sha256="0gc14rhfy566yw2yqzq7yk0xanpzcz7zp3km483azgk816vakbn4"; depends=[]; }; - cbsodataR = derive2 { name="cbsodataR"; version="0.3.4"; sha256="197x0i1v4cxra79zpdi0rgbbibgx5l37mb88pd81gnyd97vcnp8s"; depends=[jsonlite whisker]; }; + cbsodataR = derive2 { name="cbsodataR"; version="0.3.5"; sha256="1j0v360q5vwl4xqzd35glwilcz8hv6kh4kky19zkzckkj4qqzidi"; depends=[jsonlite whisker]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.2"; sha256="166spwqsqbp42mr1acglydlxspcpn8vhnim8r3s9m81sa9pmazpj"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; @@ -5796,8 +5898,9 @@ in with self; { ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; ccostr = derive2 { name="ccostr"; version="0.1.0"; sha256="0yfmj8v7ip595v87w9dmlzl5rih2j0lsapswh9b9vvc20wnk48ld"; depends=[data_table dplyr forcats ggplot2 knitr msm Rdpack rlang survival tibble]; }; ccrs = derive2 { name="ccrs"; version="0.1.0"; sha256="1nyw4ip9v7y6yfbfdz3bwhy4r6hpp1hiip3ycldxlkl9wrxkxgrw"; depends=[cds colorspace dplyr limSolve lsbclust msm]; }; + ccss = derive2 { name="ccss"; version="1.0"; sha256="0m2facn6kwxrjxg9a8z0pjnhp0rkgw6nxj6sac93ig24zygx4380"; depends=[]; }; cctools = derive2 { name="cctools"; version="0.1.2"; sha256="03lp9pa9qr2hi584ivvmswxmwjw1c3a6xqladpqldjhzvzpxvcwi"; depends=[qrng Rcpp RcppArmadillo]; }; - cdata = derive2 { name="cdata"; version="1.1.2"; sha256="1h28xcnwzxbm749hmqciqzjca7kd4r7hvqi50la0zqh371fv98xs"; depends=[rqdatatable rquery wrapr]; }; + cdata = derive2 { name="cdata"; version="1.1.3"; sha256="15ql0w90n0y3jy21vkpdkqhiq3rf2hwz16l39hg3kpvnvn65k23r"; depends=[rqdatatable rquery wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcfluview = derive2 { name="cdcfluview"; version="0.9.0"; sha256="0i6jipzpfcqs48w0cwjyynf3lpdppa7xh27q1rwv3jsqd246880v"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="2.0.3"; sha256="0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9"; depends=[ks mvtnorm Rcpp]; }; @@ -5842,14 +5945,14 @@ in with self; { cfma = derive2 { name="cfma"; version="1.0"; sha256="006z5g3rqpg44jqdf6ivyxr47sxm5cd9cqhayfi8qk73xx5w4lv9"; depends=[]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; - cgam = derive2 { name="cgam"; version="1.14"; sha256="1919pvl03lbf30nalwalasi1i883xxcmg3hs88b0paz9vvlfl1li"; depends=[coneproj lme4 Matrix svDialogs]; }; + cgam = derive2 { name="cgam"; version="1.15"; sha256="0bgvsjhafhhkhdq2b1dvji72913wrhi05adzrsnhrk7vwf8xxjki"; depends=[coneproj lme4 Matrix svDialogs]; }; cgdsr = derive2 { name="cgdsr"; version="1.3.0"; sha256="07yc819hkabpzzh0g0cbqza6bcfy67b2marrzz1lj97f9iba78ja"; depends=[httr R_methodsS3 R_oo]; }; cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; }; cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; cglasso = derive2 { name="cglasso"; version="1.1.1"; sha256="0d3r6jxrh1z4qnpxcfvwd7bcayzya2dhfl3hpfqd2dzm8fwwc2lf"; depends=[igraph MASS]; }; cglm = derive2 { name="cglm"; version="1.0"; sha256="1539n1q1zz1888d143w6vva9465viwcnb49frcsb74j3zvk6j4zp"; depends=[data_table nleqslv Rcpp RcppArmadillo]; }; - cgmanalysis = derive2 { name="cgmanalysis"; version="2.4"; sha256="17njw0abcmfwaqhglfnmgmbyp4zxjmxbchjiabsv6nan1scl9z43"; depends=[gdata ggplot2 lubridate pastecs pracma readr zoo]; }; - cgraph = derive2 { name="cgraph"; version="4.0.3"; sha256="0q3zfwa910h1y8hgm5pam8jnqak9zvkq55bkary0h3kglmg25p67"; depends=[]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="2.5"; sha256="0mpdd56zhvdlwl305752ivmabmlqb2pkayqrscraq7kshb3fm8cr"; depends=[ggplot2 lubridate pastecs pracma readr readxl zoo]; }; + cgraph = derive2 { name="cgraph"; version="5.0.1"; sha256="14x0q2353kfd66788amxydayqigrhfgdkf9i6rcliwc0cx9hqcck"; depends=[]; }; cgwtools = derive2 { name="cgwtools"; version="3.0.1"; sha256="15qllfcgls6hpj51xa7mklr5ppxrs2avbiwq3y4bqbb20fld78w3"; depends=[]; }; chandwich = derive2 { name="chandwich"; version="1.1.2"; sha256="196k13qg9kl94yki989ncx2mrvvj82vv8mi453s8lqmv9s875841"; depends=[numDeriv]; }; changedetection = derive2 { name="changedetection"; version="0.2.0"; sha256="0j8x7qyna7qgjhx56yxav1g3wj3r47zvx2hivybsjis2gqbl82hr"; depends=[glmnet L1pack Rdpack]; }; @@ -5877,13 +5980,16 @@ in with self; { chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; chicane = derive2 { name="chicane"; version="0.1.1"; sha256="1d2rvaxdcambawf8l4sn566nr3s8xgf8nfpqa5n6lazvik8vb7kb"; depends=[data_table doParallel foreach gamlss gamlss_tr iterators MASS]; }; - childesr = derive2 { name="childesr"; version="0.1.1"; sha256="0jbyby215dizcsp27mb2a4fbjmpfyj2br6m2j43wchlbhjidz70i"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; + childesr = derive2 { name="childesr"; version="0.1.2"; sha256="170xjsk0sjwlw3w3nf9jmq4yd6ivbznmjhqq2np5grn1rwlswawb"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; childhoodmortality = derive2 { name="childhoodmortality"; version="0.3.0"; sha256="1ixd10jyzgr1ssnjas35kngpsqyjzl73wwpvcspv06cn12sv2b8d"; depends=[dplyr matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.7.4"; sha256="1dyzidmbr7608y65kymf7x5s19qjsz9hxzfv51ml1kaymml1hbf3"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr purrrlyr reshape2 tibble tidyr VGAM]; }; - chillR = derive2 { name="chillR"; version="0.70.17"; sha256="0nlb7clbq12j8llk95f6yc5k81a2n3vmcbisk912h2wxn8qxnkwd"; depends=[assertthat dplyr fields ggplot2 httr jsonlite Kendall pls plyr R_utils raster RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; + chillR = derive2 { name="chillR"; version="0.70.21"; sha256="0sj97c4sgmywr5fl5csjyk9g6sy4a6vw2ryvg0idsfidklrdfvxd"; depends=[assertthat dplyr fields ggplot2 httr jsonlite Kendall pls plyr R_utils raster RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.2.1"; sha256="17sffxjpga8mq8xfxhas9jqj71bb80ayz4m2dgnmg1w6bb3p7bsp"; depends=[jiebaR Matrix NLP purrr slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; - chngpt = derive2 { name="chngpt"; version="2019.9-2"; sha256="0dx4y104108y5ig8339d17a30m9ghiay8p962fvk7rbmgasaa4a2"; depends=[boot kyotil MASS survival]; }; + chisq_posthoc_test = derive2 { name="chisq.posthoc.test"; version="0.1.2"; sha256="0lvj3jqhaj1ijjpzvpq3fn3a1y3fgv69pxh91j6k958pn6vmp40i"; depends=[]; }; + chk = derive2 { name="chk"; version="0.2.1"; sha256="09bs1q3x6393rk91l6491pbjs4wyn63n7i8lzpg2jxjl25c2xa3y"; depends=[lifecycle rlang]; }; + chlorpromazineR = derive2 { name="chlorpromazineR"; version="0.1.2"; sha256="0zg3xjq67na98n4amsm5v4cn9ba1k7c0lb7k2lvxa3n1w7rndpw3"; depends=[]; }; + chngpt = derive2 { name="chngpt"; version="2019.11-30"; sha256="1yw6hsshpsavmx3v1ndh4b0crr8wsak8h1vbv5qrbj3g1jzazrx7"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-3"; sha256="1nsc8p4svfc6z7ckffl24c0acnaxi6cnpz7jq03vzn6spxvpjcmw"; depends=[AlgDesign]; }; cholera = derive2 { name="cholera"; version="0.7.0"; sha256="0ja013k431vd0sjy74y2mlrii46rbwb5x886jaza4ihb48mgz7ah"; depends=[deldir ggplot2 HistData igraph KernSmooth pracma RColorBrewer sp threejs TSP]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; @@ -5892,7 +5998,7 @@ in with self; { choroplethr = derive2 { name="choroplethr"; version="3.6.3"; sha256="0m6kyrgnv5s1q2ncc63rfxcwqdqx5adqk14q57ss4r84i14dm5yb"; depends=[acs dplyr ggmap ggplot2 gridExtra Hmisc R6 RgoogleMaps stringr tigris WDI]; }; choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.1"; sha256="13ljs21hdhiv6n4napmk1gjnjhpll6j5wyijzv4xnnbi1y3ns7a9"; depends=[ggplot2]; }; choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; - chorrrds = derive2 { name="chorrrds"; version="0.1.9.1"; sha256="1l6n7hc63rxdwv3yar7cxcq7fx3n5n1l1gpqmyfarf2i0bbxmvjl"; depends=[dplyr forcats magrittr purrr stringr XML zoo]; }; + chorrrds = derive2 { name="chorrrds"; version="0.1.9.2"; sha256="0g999i5nlxhbjcnx3kfv4qzd16ybj0da5bwkkn0bsb9qbp8s7lll"; depends=[dplyr forcats magrittr purrr stringr XML zoo]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoMap = derive2 { name="chromoMap"; version="0.2"; sha256="1ljjwkv7rdy1mcrkb8dd5lfkg54gxzclsjvla4qnc8j5hmfp0p8g"; depends=[htmltools htmlwidgets]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; @@ -5908,36 +6014,35 @@ in with self; { circglmbayes = derive2 { name="circglmbayes"; version="1.2.3"; sha256="1a60d8jpvwx2qwmy2if60c5vni9hp73fdwgz7mwi5xd5l67zwd3h"; depends=[BH coda ggplot2 Rcpp RcppArmadillo reshape2 shiny]; }; circlize = derive2 { name="circlize"; version="0.4.8"; sha256="0jvr9hmxyhg0zx101iiqkrg8wfaj86kp62xpv42n2j9fkn5r1mi2"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; - circumplex = derive2 { name="circumplex"; version="0.3.3"; sha256="11n3zj6mdv4hv0gfg7i2m1kw1ghz20frwdaq22qx5pcpzz6d7yzc"; depends=[assertthat boot dplyr ggforce ggplot2 glue htmlTable magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; cit = derive2 { name="cit"; version="2.2"; sha256="1lf8r3r4zwvs08vl4byhw6rvf54nb7vg83558pi0b5866m7in4sc"; depends=[]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; - citecorp = derive2 { name="citecorp"; version="0.1.0"; sha256="1xp5vwrqxin0gp2kx8wn3bxajin0c7pa5f352csk6ivr2y7czl0p"; depends=[crul data_table fauxpas jsonlite]; }; + citecorp = derive2 { name="citecorp"; version="0.2.0"; sha256="1lkbfklmwp84408pbpr8n63r4kqrw3z36mzmhramxnscrsf3f8k6"; depends=[crul data_table fauxpas jsonlite]; }; citr = derive2 { name="citr"; version="0.3.2"; sha256="1qbarvafjb8jgkrnrhh6jw7mcglmjwf7dpdiibxf39jkmlhf7las"; depends=[assertthat curl httr miniUI RefManageR rstudioapi shiny shinyjs yaml]; }; ciuupi = derive2 { name="ciuupi"; version="1.1.0"; sha256="0czfmmf62p1vml24s87pdwv52spqycchpkqzwk8vyd4n1z27r5s2"; depends=[functional nloptr pracma statmod]; }; civis = derive2 { name="civis"; version="2.1.0"; sha256="0bpm42q243ghq03x9vajs0yjdhy4lgn7fqndc53172inmkxwp7dy"; depends=[future httr jsonlite memoise]; }; cjoint = derive2 { name="cjoint"; version="2.1.0"; sha256="1bs380ji9vsc1d77wqhl0ij9xblww3g9x3hiwpcpz26wihqcx7ac"; depends=[DT ggplot2 lmtest Matrix sandwich shiny shinyBS shinyjs survey]; }; - ck37r = derive2 { name="ck37r"; version="1.0.0"; sha256="0nn2sfsfs8mhgjrz0ghn041ybhj2qim4rs3lkci7s4n95c8hbgdi"; depends=[caret cvAUC doParallel doSNOW foreach ggplot2 pryr randomForest RANN reader RhpcBLASctl ROCR snow stringr SuperLearner tmle]; }; - ckanr = derive2 { name="ckanr"; version="0.3.0"; sha256="0qbsq40yxy9j7q49k5712gk8iv0c7rcr8w0hnv410035i1rddlfj"; depends=[DBI dbplyr dplyr httr jsonlite magrittr]; }; + ckanr = derive2 { name="ckanr"; version="0.4.0"; sha256="17mb8ank4p39mkmkrpj40hk2g1wpn06k0rx65hqd5h49pvlj21d3"; depends=[DBI dbplyr dplyr httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.15.1"; sha256="0msay6yvm6wc964gwrz31ky5w4mizakji3j6rpkydz0zlrl52v1j"; depends=[Rcpp RcppArmadillo]; }; clam = derive2 { name="clam"; version="2.3.2"; sha256="1za0njc10mcvdmyyy4yy6sgzl6kk2kix319w84d5mcs2zrfb83j4"; depends=[]; }; - clampSeg = derive2 { name="clampSeg"; version="1.0-4"; sha256="0clmv53wz7shawg6mp4q3qp0z0gmd8jmd6flgzn2q1m8j2i62vq0"; depends=[Rcpp stepR]; }; + clampSeg = derive2 { name="clampSeg"; version="1.0-5"; sha256="05922fddvi7s4imdnr9fb27aqskgd489amw9h86g5vw4l494lnl9"; depends=[Rcpp stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; class = derive2 { name="class"; version="7.3-15"; sha256="1x1hqz8xyhbpq4krsh02glqnlzcch25agkmn4a3da9n723b37gzn"; depends=[MASS]; }; classGraph = derive2 { name="classGraph"; version="0.7-5"; sha256="19jb9jr1gfg4karymrbilh0zjrlsczhy2q03x5b0jxnh4ykhxfj8"; depends=[graph Rgraphviz]; }; - classInt = derive2 { name="classInt"; version="0.4-1"; sha256="00q1bpgblrldckn1rk166q1b0hgap2sjjyfmfcyh6ydk6y73ziir"; depends=[class e1071 KernSmooth]; }; + classInt = derive2 { name="classInt"; version="0.4-2"; sha256="0w980hrw8sgfdfyd5dsimalq7gwhvqm7507abk7k363pvgks23dv"; depends=[class e1071 KernSmooth]; }; classiFunc = derive2 { name="classiFunc"; version="0.1.1"; sha256="1qaima3sii394741p5n06lcqkk4fiv9apb7qqnpi6srx5h02lfl5"; depends=[BBmisc checkmate dtw fda fda_usc fdasrvf proxy rucrdtw zoo]; }; classifierplots = derive2 { name="classifierplots"; version="1.3.3"; sha256="01rvn0jwliyxj7q4cmyv8an5g7fzn6y3sccp8mj6bcqjyblfcfaa"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; - classyfireR = derive2 { name="classyfireR"; version="0.2.2"; sha256="1v7sqwak8wczr6611aw0kzjhnyr6xsdzlmm8080w9dgcs2aani9b"; depends=[clisymbols crayon dplyr httr jsonlite magrittr purrr stringr tibble]; }; + classyfireR = derive2 { name="classyfireR"; version="0.3.0"; sha256="1cagdwr8i3f4c4hjdgg64f3kp7ibndh766na7psd0pmki5s8grsv"; depends=[cli clisymbols crayon dplyr httr jsonlite magrittr purrr stringr tibble]; }; cld2 = derive2 { name="cld2"; version="1.2"; sha256="03ffg1nxdlmg66sgg0w2jdx2s5jzdp8qhja24z0il2qy3qsa915k"; depends=[Rcpp]; }; cld3 = derive2 { name="cld3"; version="1.2"; sha256="11bjkbhjxaf6lc96qm8zk4k1i66b69f8dmc303i1560b2jj2zah3"; depends=[Rcpp]; }; clean = derive2 { name="clean"; version="1.1.0"; sha256="11jfg9xh6xyhcva4pq5bl7bg2d2ar12mp568j8j79dqlci3f53zx"; depends=[crayon knitr pillar rlang]; }; cleanEHR = derive2 { name="cleanEHR"; version="1.0"; sha256="0i8q7y4izc7q1pshdajy0n9wyihj4wlzzkd52ykam3dxqnwlnyh4"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; - cleanNLP = derive2 { name="cleanNLP"; version="2.3.0"; sha256="0d3v87ylp5vxkg6x5wfc1v482a3wcy02bb5xl3k2s8jpsawf2vxd"; depends=[dplyr Matrix stringi]; }; + cleanNLP = derive2 { name="cleanNLP"; version="3.0.0"; sha256="15prwj32rq28dqqpfagaq4vfbimjws7ldrjm7waf4w6rcavz7r93"; depends=[Matrix reticulate stringi udpipe]; }; cleancall = derive2 { name="cleancall"; version="0.1.0"; sha256="0g52nvr8fnwlhfzx0ja87xkg4ff3jafj08qz9xkwc790zfszc6z1"; depends=[]; }; cleandata = derive2 { name="cleandata"; version="0.3.0"; sha256="1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk"; depends=[]; }; + cleaner = derive2 { name="cleaner"; version="1.2.0"; sha256="0n8qxvy8xixdgibh17fsl5vf1nvfj0l0804crdjq3lhr5s3b794f"; depends=[crayon knitr pillar rlang]; }; cleanerR = derive2 { name="cleanerR"; version="0.1.1"; sha256="0rghn8rx7dj5clmc1dqvqwfm9kiva04k9gxsjjga3109l4jcpg63"; depends=[data_table plyr]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-2"; sha256="1bhpn53v36652mwg2ba2a6cs34slb7i0df2ibssyr2lnx5gciq4i"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.2.0"; sha256="1yd6w4jv4rj1g67i3q7h0z2n8nycvg67ixxgf49fplxnjhxq09g5"; depends=[checkmate pkgload rprojroot]; }; @@ -5950,7 +6055,7 @@ in with self; { clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; clifro = derive2 { name="clifro"; version="3.2-2"; sha256="11bfvaf1b1wv83dw8ggj7ldsc6fs8s3gl7jdzyq7l1w7innihp9s"; depends=[ggplot2 lubridate magrittr RColorBrewer RCurl reshape2 scales xml2]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; - climateStability = derive2 { name="climateStability"; version="0.1.1"; sha256="0zmxcf4l79rgq2ar7v3asrjr8hci1ba6xl1xwb56mm3qnkc75q7d"; depends=[knitr raster]; }; + climateStability = derive2 { name="climateStability"; version="0.1.3"; sha256="1zag722sznr22xid2v1k4a9sh3sr3grfa3wwd2m943zpvyi1sk9a"; depends=[raster]; }; climatol = derive2 { name="climatol"; version="3.1.2"; sha256="0p3nk4n7izj0cmmqd9apa1gix5lfdzp08ydy0n7rkl5kbkmrkb6n"; depends=[mapdata maps]; }; climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-9.1"; sha256="13wjkz2ldpvw9ri58vqpzdrqqyvzygmhzshx10v25d757x6h1qvb"; depends=[PCICt Rcpp]; }; @@ -5977,7 +6082,7 @@ in with self; { clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; clubSandwich = derive2 { name="clubSandwich"; version="0.3.5"; sha256="03mxfvh2h4gigis7wzq9hwzfaanpx66h1c16xx11pqfkvdfwal49"; depends=[sandwich]; }; clue = derive2 { name="clue"; version="0.3-57"; sha256="05rdcahawxlxci3fjxihjvvh33wqpxw50sx015165ab4nh3rsdkf"; depends=[cluster]; }; - clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; }; + clues = derive2 { name="clues"; version="0.6.1"; sha256="1g7qy9fxdjmc3y7x0qpa9prn5l83l3j59dzs862f35k7mzfnyggj"; depends=[]; }; cluscov = derive2 { name="cluscov"; version="1.1.0"; sha256="0345v5r6b53243h5bir29v0w77pmwjqjkqfrjnk5j5r1wbh98q1w"; depends=[MASS quantreg]; }; clusrank = derive2 { name="clusrank"; version="0.6-2"; sha256="1hjxks8cb1mp1d93rcpwqjrxqavspmzjrxvflhv6nqx41ar9dpxv"; depends=[MASS Rcpp]; }; clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; }; @@ -5995,7 +6100,7 @@ in with self; { clusterPower = derive2 { name="clusterPower"; version="0.6.111"; sha256="1mwq188x9d495my75cdcahfjm3w46cas9jqxks5c0j63395cw9g3"; depends=[lme4]; }; clusterRepro = derive2 { name="clusterRepro"; version="0.9"; sha256="0s7qqvaf5yxxwhw6qyzfmk65c49yz405gljarwav6aglkx9883cl"; depends=[]; }; clusterSEs = derive2 { name="clusterSEs"; version="2.6.2"; sha256="15a9hn8g70y64v5lq91mwjbx411ji2b5zvm1wm4qz820jri5wy20"; depends=[AER Formula lmtest mlogit plm sandwich]; }; - clusterSim = derive2 { name="clusterSim"; version="0.47-4"; sha256="06x8qhsxbv9qgad9h24bpylzc06p6w1fdpzm5bmmvaddmg6ghkkg"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; + clusterSim = derive2 { name="clusterSim"; version="0.48-2"; sha256="0y1y09y7dmk8kfnzhmywxbjcxg4qkawjsqxvpfkz9rqw0q2hchya"; depends=[ade4 cluster e1071 MASS R2HTML rgl]; }; clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.1"; sha256="01w7i9pmvwmrlf5q6y2d48ib0bm16j16xiw4pqnrvbndx4d6wf6n"; depends=[cubature Formula lme4 numDeriv rootSolve]; }; clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; }; clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; @@ -6006,7 +6111,7 @@ in with self; { clusternor = derive2 { name="clusternor"; version="0.0-3"; sha256="0qf1k5y9i60skdqz7glq7czwg84gafnxfg0npx772xydvivan210"; depends=[Rcpp]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; - clustrd = derive2 { name="clustrd"; version="1.3.5"; sha256="0i9zp7084biym29dx87ljjpcvcbl1wi7bn50hh6v4y54ws0fgyh9"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; + clustrd = derive2 { name="clustrd"; version="1.3.6-2"; sha256="06njv48sb3j7d5517l6c886hqmlyp5vk6pk5zpmdmzcxay6c81qy"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; clustree = derive2 { name="clustree"; version="0.4.1"; sha256="0jsffqd25ad08q35a3ggzblhia7y6m5gj972kij6nrbah920qk0x"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; clustringr = derive2 { name="clustringr"; version="1.0"; sha256="07f0ywpkf8igic7ijvvrjlngq3smjcv9nqnah41fp6wfgvh49ifq"; depends=[assertthat dplyr forcats ggplot2 ggraph igraph magrittr rlang stringdist stringi stringr tidygraph]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; @@ -6021,12 +6126,13 @@ in with self; { cmna = derive2 { name="cmna"; version="1.0.2"; sha256="18vbqa258m0g5pvfhqi2vbr8n2bil07n9spgz1wh2axw1c3bcf76"; depends=[]; }; cmocean = derive2 { name="cmocean"; version="0.2"; sha256="0v1bm2qgvjb82ynakglr61swx5jy41ngn6vml5gllv3r7skqr1is"; depends=[]; }; cmpprocess = derive2 { name="cmpprocess"; version="1.0"; sha256="0gqfmbm86bfi2l81pf2dn70rxg58h1y8hiyrp8sv9v84cx20422v"; depends=[compoisson numDeriv]; }; - cmprsk = derive2 { name="cmprsk"; version="2.2-8"; sha256="1nacbzx950ygaqgnj0949skhwpzar5i3xlscd44jsimk2gsppx6z"; depends=[survival]; }; + cmprsk = derive2 { name="cmprsk"; version="2.2-9"; sha256="0xhgfg5b4i9skkaxp7gzkafgg5bqs5q1rp4hpw2jjmykg2nifn99"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.2"; sha256="1b3di5fsgglriv00fxydpc4p8lh0xcgi6jc04awq2vmp6s8kvjmw"; depends=[quantreg survival]; }; cmrutils = derive2 { name="cmrutils"; version="1.3.1"; sha256="0nrq84bkd23lvvg8ls2smkjcnfnydhbcni3n6s8w0579i9xga8dv"; depends=[chron]; }; cmsaf = derive2 { name="cmsaf"; version="2.0.1"; sha256="0ampq493i8x40jk8p8acgizy1vlhm05i5nllk5a0xk81vywf7ifi"; depends=[fields FNN ncdf4 rainfarmr raster sp]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-6"; sha256="1wf23w9gxrrgw7j740r381xrss09inzd7mrg6g7wz883c9madbfn"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="2.2.1"; sha256="1yzr3r8jykr25i52f5rvq9h68gnkqksy9qkkmib771kmdy1k310a"; depends=[matrixStats Rcpp]; }; + cnaOpt = derive2 { name="cnaOpt"; version="0.1.0"; sha256="1km2v3gkjzy2lib6b39fz9z733wdnkzlxhg12a58sd93wisg68h2"; depends=[cna dplyr ggplot2 matrixStats Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; cnmlcd = derive2 { name="cnmlcd"; version="1.2-0"; sha256="1vpn926wf8vkifscnb35y4c74721iar2wykrl50fcv0fg16yggnd"; depends=[lsei]; }; @@ -6035,7 +6141,7 @@ in with self; { coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; coalitions = derive2 { name="coalitions"; version="0.6.10"; sha256="1yfibzkg4psmghfwpv5rivaxzizilbd8frgpd0z05hx519lmx9h7"; depends=[checkmate dplyr forcats ggplot2 gtools jsonlite lubridate magrittr purrr RCurl reshape2 rlang rvest stringr tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-4"; sha256="1y6msvcr1j9cvnc1v87p6wkwvnn7iszwsr9sl6ixjjwgnpc05ayc"; depends=[MCMCpack]; }; - cobalt = derive2 { name="cobalt"; version="3.8.0"; sha256="0bgcdlars0diql3x60nvizlvn3ny5if1jac2whhzvnm5pbchlqf1"; depends=[backports crayon ggplot2 ggstance gridExtra gtable]; }; + cobalt = derive2 { name="cobalt"; version="3.9.0"; sha256="173chz93cwzxgh8lnvlvl9bzsd4plqrqxh6bwr6xkj11m5xmc7by"; depends=[backports crayon ggplot2 ggstance gridExtra gtable]; }; cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; }; cocktailApp = derive2 { name="cocktailApp"; version="0.2.1"; sha256="1aq7m3qb4s5v59ym8p5vh7lr5s1xfp8b04x64a014k47gakgiw1d"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; @@ -6060,11 +6166,12 @@ in with self; { coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; cofad = derive2 { name="cofad"; version="0.1.0"; sha256="034ihvg2bqlfhpwivza15slksn7zxk3k20rdyx9zlriqzfgvlwws"; depends=[]; }; cofeatureR = derive2 { name="cofeatureR"; version="1.1.1"; sha256="1awfrlnbpw9ivfvaahznx6dx5jp8ln0154vh2pznp520q59h1mbs"; depends=[dplyr ggplot2 lazyeval tibble]; }; - coga = derive2 { name="coga"; version="1.0.0"; sha256="0mx3jdjd1s855lk451zmjf6w5rpajx39q6w7aw3kng68snyalz16"; depends=[Rcpp RcppGSL]; }; + coga = derive2 { name="coga"; version="1.1.0"; sha256="0p2mdia89gj7w0j33qxil1l2zg6civj18i3pqym7aijzz1fgwnzp"; depends=[cubature Rcpp RcppGSL]; }; cogmapr = derive2 { name="cogmapr"; version="0.9.1"; sha256="1iz776avw05a0lcna78fycixacby4bjf8ar1jazsf34yss6zka23"; depends=[car dplyr ggplot2 graph magrittr Rgraphviz tidyr]; }; + cohorttools = derive2 { name="cohorttools"; version="0.1.0"; sha256="0350q0dyy0rfk2g8anc62cib2gq7hi4zzg3gsd02fhwadz5gnjga"; depends=[DiagrammeR DiagrammeRsvg Epi epitools rsvg survival]; }; + coil = derive2 { name="coil"; version="1.0.1"; sha256="1hlyaqq253rxbng6ji1z64ld52bpxkcwb0g6709nvai297wixxyl"; depends=[ape aphid seqinr]; }; coin = derive2 { name="coin"; version="1.3-1"; sha256="0qi03fyqw42a2vnqcia5l2m1mzyarj2q1iblknx9n19bdsd53qjx"; depends=[libcoin matrixStats modeltools multcomp mvtnorm survival]; }; coindeskr = derive2 { name="coindeskr"; version="0.1.0"; sha256="0iwkg9qx5gymzjxw3w1zlwq9336kbqp4z8a9wf9a1p2gp9727qcm"; depends=[httr jsonlite]; }; - coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.2"; sha256="1r3r5ifl663pdmkvkrf6yhdg1kwmwdjg9kvp0ykbdvpbvqjcjhkv"; depends=[curl ggplot2 jsonlite]; }; cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; }; cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; cold = derive2 { name="cold"; version="2.0-0"; sha256="10kn2kycyc6di30ji6lk5agsczh1zdv65s8ryj6q2f40v0y0zlck"; depends=[cubature]; }; @@ -6073,13 +6180,13 @@ in with self; { collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.7"; sha256="0b65pbp1wnpsrayqi630ds4r98jvcvynnlp6wxdqrnnr9nzw5343"; depends=[data_tree htmlwidgets]; }; collateral = derive2 { name="collateral"; version="0.4.2"; sha256="1i1fzvm838s2cfmxw654vwmp9rl9f9985vjildkxyx2f6571sjfm"; depends=[crayon pillar purrr]; }; collectArgs = derive2 { name="collectArgs"; version="0.4.0"; sha256="0fz5w1xsxiddzrwahrg50px4igyhd4plq655jaix6grancs7kvix"; depends=[magrittr]; }; - collections = derive2 { name="collections"; version="0.2.0"; sha256="04rnfz2ljfsimi98mjy9f6mzw73z8n6v9lji0sfz6kv1ma2asibi"; depends=[xptr]; }; + collections = derive2 { name="collections"; version="0.2.3"; sha256="1fkajfmh7zx2a111js2sdlkzx5q0an67s7ns9jsy65zl7iqis3i0"; depends=[xptr]; }; collidr = derive2 { name="collidr"; version="0.1.2"; sha256="1b8yy0p1r4gs6azcl1aqkny3hws5hhl9bvsrkrhgk2r2xni9sk6f"; depends=[dplyr jsonlite stringr]; }; - collpcm = derive2 { name="collpcm"; version="1.0"; sha256="15k6khsgikjpsasyz02bhgd43nij2n7nl0m0sgxvjlcn0nv95y2n"; depends=[latentnet network vegan]; }; + collpcm = derive2 { name="collpcm"; version="1.1"; sha256="14rlipdww5sm1ijp2ggpnd23m14qh10zm99cfq1w0kky9jfl0fkn"; depends=[latentnet network vegan]; }; colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; coloc = derive2 { name="coloc"; version="3.2-1"; sha256="0sm2mji8bihvcshkh9g18sgbwznhh8j4hip50rk7ckac3vc8y75h"; depends=[BMA data_table ggplot2 reshape snpStats]; }; - colocalization = derive2 { name="colocalization"; version="1.0.0"; sha256="0szdxjj5nbb3ncxsg0b7jphlqqxnizs2lymcafk42sdgvlfkx8sr"; depends=[ggplot2]; }; - colocalized = derive2 { name="colocalized"; version="0.1.0"; sha256="1c25bq618bhgc6s7rv20ih94pzchrwgmizssnjy3m1z2czmhpnr3"; depends=[doParallel foreach purrr]; }; + colocalization = derive2 { name="colocalization"; version="1.0.1"; sha256="0ax560r5f629zv8rfa91ynx8g3kcn5ga553k5svircl21n65zb1y"; depends=[ggplot2]; }; + colocalized = derive2 { name="colocalized"; version="0.2.0"; sha256="1q98wfqk0p9p92jgjf8liamz6grzwy6h57k7681fm07wfnyr268g"; depends=[doParallel foreach purrr]; }; colocr = derive2 { name="colocr"; version="0.1.0"; sha256="0lfwhn3hd7kwhm6dwbpfqhsphz2249vb0mpjvma18zym93x6gj2i"; depends=[imager magick magrittr scales shiny]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; colorSpec = derive2 { name="colorSpec"; version="1.0-1"; sha256="1fgikg5x9ir2n7nhjvsflnz99g2wjh3jj1yh59jiirq725dw573d"; depends=[MASS spacesXYZ]; }; @@ -6092,16 +6199,16 @@ in with self; { colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; }; colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; }; colorr = derive2 { name="colorr"; version="1.0.0"; sha256="1wwrgb9fc9gzxxwxrdrkwwrmhqqllv29wr4q8y1shj9d3nzcpwmh"; depends=[]; }; - colorscience = derive2 { name="colorscience"; version="1.0.5"; sha256="0pr28fhv7alvki9f6wncys8lxihsl6q6lr8xffw4fkkgyapnhqxg"; depends=[Hmisc pracma sp]; }; + colorscience = derive2 { name="colorscience"; version="1.0.8"; sha256="11fy8545g93b8dn2imihsb031lnf5g5z17km8q07q4y6g96xdbdv"; depends=[Hmisc pracma sp]; }; colorspace = derive2 { name="colorspace"; version="1.4-1"; sha256="0wyny3ah2d74hqv80s6imrarpna09gq3j9rjnz6zx2qg0lx72gb9"; depends=[]; }; colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.3.5"; sha256="172ny0w9n2ys8pa7zxkfjsl7lv6fa59bmmbkzlwfx59wamxahmky"; depends=[httr jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.0"; sha256="0z3v2083g7kwdp21x9s2n1crfh24agpdq3yxkcdzc2awn2pwpnpi"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; - colourvalues = derive2 { name="colourvalues"; version="0.3.0"; sha256="1r762z0dkm0f8agj29mry8k5b9m4yby9kw3bgywbvw3z4mrwic0d"; depends=[BH Rcpp]; }; + colourvalues = derive2 { name="colourvalues"; version="0.3.1"; sha256="0bwahphbvmk0jq4iafvny1nwsvcksm5avly8d30w7b6kkirym7jk"; depends=[BH Rcpp]; }; colourvision = derive2 { name="colourvision"; version="2.0.2"; sha256="15ndhqpp5fi9jgiri9ysl68nf4rdamh9c25svf5nvh2wvv8shrd9"; depends=[Matrix rgl]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; - comat = derive2 { name="comat"; version="0.3.0"; sha256="0lqkhj4ina7zfrlpn55ac68f79asd3fhcx086ll6gjibfn3vf68f"; depends=[raster Rcpp RcppArmadillo]; }; + comat = derive2 { name="comat"; version="0.7.2"; sha256="1rca5n47ypw8mbhx40x9vi4wvkpnzzyxgm4vb7sq32w5pnydnkcn"; depends=[Rcpp RcppArmadillo]; }; comato = derive2 { name="comato"; version="1.1"; sha256="0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; }; @@ -6112,7 +6219,7 @@ in with self; { commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; commonmark = derive2 { name="commonmark"; version="1.7"; sha256="024iz1qp2kv6iz6y69ir0jk3qhjps86rhkzlcmhqsxx97rx7cjni"; depends=[]; }; commonsMath = derive2 { name="commonsMath"; version="1.2.4"; sha256="12hwl3xjm7kl5y36v3y4jyr2gk4l87mff237qms2hy8y41nwwagr"; depends=[]; }; - comorbidity = derive2 { name="comorbidity"; version="0.5.0"; sha256="137j4lyg2l0qlzsdpzlghx39gb6zlwm8jfvn57srq4ybmpsydp18"; depends=[checkmate data_table reshape2]; }; + comorbidity = derive2 { name="comorbidity"; version="0.5.2"; sha256="0kf1fxv5aqkwy7q0df6f29jgjry3zliahgrs11rfmym5dhrb8rvm"; depends=[checkmate data_table]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; @@ -6134,7 +6241,7 @@ in with self; { complexplus = derive2 { name="complexplus"; version="2.1"; sha256="16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.7.0"; sha256="0dvkc5y53041agkjz3rl898hkq686pxzr6flf2qx1g3jbza3pk1y"; depends=[boot ggplot2 robustbase scales]; }; compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; - compositions = derive2 { name="compositions"; version="1.40-2"; sha256="12mp05yi7jkdqg9iwh6bc9sx6sdxagcnrirznxy9hq8502p7238i"; depends=[bayesm energy robustbase tensorA]; }; + compositions = derive2 { name="compositions"; version="1.40-3"; sha256="103hbmibrf1n333pn4xpll1gqqsv4szms0n5gdq7zak31aar0bg4"; depends=[bayesm robustbase tensorA]; }; compound_Cox = derive2 { name="compound.Cox"; version="3.19"; sha256="1wl8jg916567nk0wy37in6syh7z2rw70v5jm7s0w3ifiqs5v7nzb"; depends=[numDeriv survival]; }; comprehenr = derive2 { name="comprehenr"; version="0.6.7"; sha256="0c0wid4lch7yrz41b8n773hy4zj80sfb1lhy4pclvlsjdr5zryk6"; depends=[]; }; compstatr = derive2 { name="compstatr"; version="0.2.0"; sha256="07kak4dc1q44m58wb7ps4bf5ikcnjfkvd7fn1mxfxvqljrdy6978"; depends=[dplyr fs httr janitor lubridate purrr readr rlang rvest sf stringr tibble tidyr xml2]; }; @@ -6176,11 +6283,13 @@ in with self; { conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; conjoint = derive2 { name="conjoint"; version="1.41"; sha256="1iq3226a6fn1gddmh2nxlzvjcvbj7502r9520g9d4xdmk8smfx33"; depends=[AlgDesign broom cluster fpc ggfortify ggplot2]; }; + connections = derive2 { name="connections"; version="0.1.0"; sha256="1jkk9s3w6d3751hb2y4d2lilndhpfs2alqgg6k23q7bav6848wyp"; depends=[DBI dbplyr dplyr pins rscontract uuid]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; conquestr = derive2 { name="conquestr"; version="0.3.7"; sha256="13pkbgw0z2icpc2l16g1wy92bbhmrk3l0jfhvh0sa8zj5idw35z1"; depends=[]; }; constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; }; constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; + contact = derive2 { name="contact"; version="1.0.1"; sha256="16dqvfkdckd59yx48s3qv5iz1jn087v4m93yjzmmvv78agqdi1m2"; depends=[ape data_table geosphere igraph lubridate raster rgdal rgeos sf sp]; }; container = derive2 { name="container"; version="0.3.0"; sha256="128fj97mx52kap299fmhn3whnaismsd4cq3zqpbfvwxx2ii4fd33"; depends=[R6]; }; contextual = derive2 { name="contextual"; version="0.9.8.2"; sha256="03123mghmixy9v2c5lqg0df5ycxa09mir94rkjgs8lp62ncq170r"; depends=[data_table doParallel foreach Formula iterators itertools R_devices R6 rjson]; }; contfrac = derive2 { name="contfrac"; version="1.1-12"; sha256="0sq5c7ny235yrkv2xc4insgxby6rvzc1qsj8h301cd2if3lwbgwm"; depends=[]; }; @@ -6206,6 +6315,7 @@ in with self; { cope = derive2 { name="cope"; version="0.2.3"; sha256="1r02nb6wy25ixhdcbqqz167s7ny3hydpxfxry5ar4136qvcamgyy"; depends=[abind fields maps MASS Matrix mvtnorm nlme]; }; coppeCosenzaR = derive2 { name="coppeCosenzaR"; version="0.1.3"; sha256="1chwsfyaf5rmlsypr43n7px8b2220dfa5mzcriq1swylgbx4181l"; depends=[]; }; coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; + cops = derive2 { name="cops"; version="1.0-2"; sha256="0ifp3cai490lw6dnyyjj4822x8g2mswhaamnw5ljwnxdbmjwhhrw"; depends=[cmaes cordillera crs dfoptim GenSA MASS minqa NlcOptim nloptr pso rgenoud rgl Rsolnp scatterplot3d smacof subplex]; }; copula = derive2 { name="copula"; version="0.999-19.1"; sha256="0bk92fx71282dx0whwv4rsfchw7pm7axicrl3r6f3gm4rlldf68r"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaData = derive2 { name="copulaData"; version="0.0-1"; sha256="1s917g8wasxndg1xq4b4fjaq29nyzzigpflgqcy4rxdb7r54dl0z"; depends=[]; }; copulaedas = derive2 { name="copulaedas"; version="1.4.3"; sha256="01wp8jnz7kndknj7lh9ia7mm41k1vbaksalyy9v19bb77yhgzmba"; depends=[copula mvtnorm truncnorm vines]; }; @@ -6215,20 +6325,20 @@ in with self; { corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; }; - coreCT = derive2 { name="coreCT"; version="1.3.0"; sha256="0q10w57d5r2v8xxv7rv3xppmlci09zbwlrxjwlvargzzp6ilk8in"; depends=[igraph oro_dicom plyr raster]; }; + coreCT = derive2 { name="coreCT"; version="1.3.2"; sha256="0xxcgd5qar9fwhyzs5g3fc45naca4xmcgmw88ygav02vv5y93w03"; depends=[igraph oro_dicom plyr raster]; }; coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; }; coreTDT = derive2 { name="coreTDT"; version="1.0"; sha256="14rnh61gk3m6g8rq77hm9ybds0px15di2mxm3jiyfdfynx5ng58f"; depends=[]; }; corehunter = derive2 { name="corehunter"; version="3.2.1"; sha256="0cxvhmi768kz3q8hydb6y9nqvc8hvkmq8nc5yfry4k94whk12wax"; depends=[naturalsort rJava]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; - cornet = derive2 { name="cornet"; version="0.0.2"; sha256="0m611rq7m9ki57q8n5zwp5i0l95w6nrd6cwr03q3mxg58bnh01p3"; depends=[glmnet palasso]; }; + cornet = derive2 { name="cornet"; version="0.0.3"; sha256="0f0fwyz2kp59xb4a7kxa66h0y9940fba56dlyncin5szr5nhfrpp"; depends=[glmnet palasso]; }; coroICA = derive2 { name="coroICA"; version="1.0.1"; sha256="0hjy1sdii8kk859bj1xv3vh1hzxznhymhgdb583z57i0hqxnijiv"; depends=[MASS]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; - corporaexplorer = derive2 { name="corporaexplorer"; version="0.6.2"; sha256="05dk3rb1ys3fifvscqwfgqabkbg9cxm9khd3nca7ffcwhmqbkh9g"; depends=[data_table dplyr forcats ggplot2 lubridate magrittr padr plyr RColorBrewer re2r rlang rmarkdown scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr zoo]; }; + corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.0"; sha256="0rn35wqi4bb90k440dk1sm862azx3pfgc2d6z489fdqq7xsjnk3a"; depends=[data_table dplyr forcats ggplot2 lubridate magrittr padr plyr RColorBrewer re2r rlang rmarkdown scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr zoo]; }; corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; - corpustools = derive2 { name="corpustools"; version="0.3.3"; sha256="1hgcwnjhqfyylvqcy2j5f2k6chwyybnx38vzzvq62s6qf6p9p7by"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi udpipe wordcloud]; }; + corpustools = derive2 { name="corpustools"; version="0.4.1"; sha256="1zg7vx9j678zj4hmmi03pyf91y7dxx5297ks6gk00b3521z7hybh"; depends=[data_table digest Matrix R6 Rcpp RNewsflow SnowballC stringi tokenbrowser udpipe wordcloud]; }; corr2D = derive2 { name="corr2D"; version="1.0.0"; sha256="12k6vbqyb33kfj2xdg8rbydnp2yk15kv4b0m4lid4gf2lqmy3jwz"; depends=[colorspace doParallel fields foreach mmand profr rgl xtable]; }; corrDNA = derive2 { name="corrDNA"; version="1.0.1"; sha256="1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k"; depends=[mvtnorm]; }; corrcoverage = derive2 { name="corrcoverage"; version="1.1.0"; sha256="194fb6j8pngqwnsndjld8709hj1637mswbx7ck6m3334f196af59"; depends=[magrittr matrixStats Rcpp]; }; @@ -6241,6 +6351,8 @@ in with self; { corrr = derive2 { name="corrr"; version="0.4.0"; sha256="0zjqkgsnwgcyi8hdskr7in0liqhpj9qml96agawzj11iy0bf6387"; depends=[dplyr ggplot2 ggrepel purrr rlang seriation tibble]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; + corto = derive2 { name="corto"; version="0.99.10"; sha256="0ss28d0fi30waywgz47j7vxqqxxgiixk4qandlvaxjyik3yy0n4g"; depends=[dplyr knitr pbapply rmarkdown]; }; + corx = derive2 { name="corx"; version="1.0.2"; sha256="1k9k1w5i5yky6c9jn5s80rf0r5r6qn7w0xwamjbankp2i4ryna5z"; depends=[clipr crayon ggcorrplot glue moments ppcor psych tidyselect]; }; cosa = derive2 { name="cosa"; version="2.0.0"; sha256="1ra1m75ay829xlhjax82px4ffflnfgh2mrmzzj4i8ml545d9hmgr"; depends=[msm nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; cosinor2 = derive2 { name="cosinor2"; version="0.2.1"; sha256="1pp0z86fflqkkllfrzx3vj98kzxjwnawr4a2d8z5q6zhq6v5qrvf"; depends=[cosinor cowplot ggplot2 Hmisc magrittr matrixStats purrr scales stringr]; }; @@ -6249,7 +6361,7 @@ in with self; { costat = derive2 { name="costat"; version="2.4"; sha256="0c47bklqjgjmdglw3mi9lvygwjr5w6i1zv91ll3vpnl5dnay0692"; depends=[wavethresh]; }; costsensitive = derive2 { name="costsensitive"; version="0.1.2.10"; sha256="192q55123yzcjjh4047ppxa3h7gk9afqnvm1nlhzs4ccqz71g411"; depends=[]; }; cotram = derive2 { name="cotram"; version="0.1-1"; sha256="0rjwx94gpdndpwagy2wdjdvr5b8n8qrjv9yjyxph9xw533paiz49"; depends=[basefun mlt tram variables]; }; - cotrend = derive2 { name="cotrend"; version="1.0.1"; sha256="14yzfq5a3wi26gn45mp2zm2yn6gic90csk9by66m08fgpzznz4dq"; depends=[xts]; }; + cotrend = derive2 { name="cotrend"; version="1.0.2"; sha256="17h67vnpnlv11bf3ka5mlnah9bizxjhvicsvbygy91dqbhjhj9wb"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; countHMM = derive2 { name="countHMM"; version="0.1.0"; sha256="12z0nz7in2msb5wa5yyjxx19ih8psw06m7xwlapvjksslippp6gs"; depends=[]; }; countToFPKM = derive2 { name="countToFPKM"; version="1.0"; sha256="0h89knii8zkbq0lw7yn3qzak30s7bifq53ga4vy6za6hqwc53x2j"; depends=[circlize ComplexHeatmap]; }; @@ -6265,12 +6377,12 @@ in with self; { covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; }; covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; covTestR = derive2 { name="covTestR"; version="0.1.4"; sha256="0j9kay8lwkhpdyg0fbfars1m58v0i58v1v5sm7m72s7kz8qh2yfs"; depends=[purrr Rcpp RcppArmadillo rlang]; }; - covafillr = derive2 { name="covafillr"; version="0.4.3"; sha256="0mqq4hm3nhzrvdai9blb0ycgm6j5klfd8y4ib5pl99plffs6r7pl"; depends=[RcppEigen]; }; + covafillr = derive2 { name="covafillr"; version="0.4.4"; sha256="1vsay0qlqcw3l6xp18rxrkhwsadsv9rpxwpj9f4d3vlr8inkiv4h"; depends=[Rcpp RcppEigen]; }; covatest = derive2 { name="covatest"; version="1.1.1"; sha256="0fnm3ljk4my3xinv0qswi57l51z0j6cva7by00p8f5992hhk3sn9"; depends=[gstat lubridate matrixcalc sp spacetime zoo]; }; - coveffectsplot = derive2 { name="coveffectsplot"; version="0.0.3"; sha256="0d6s7kk38px3y8132493kksa45krmjmqc3w0c3zid4r1x35h73la"; depends=[colourpicker dplyr egg ggplot2 ggstance markdown shiny shinyjs tidyr]; }; + coveffectsplot = derive2 { name="coveffectsplot"; version="0.0.4"; sha256="0lx42f86w5z7i0p2z5kwrm8rbcm4vriaagfhpixc8n7aq6mkb7bl"; depends=[colourpicker dplyr egg ggplot2 ggstance markdown shiny shinyjs tidyr]; }; covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; - covr = derive2 { name="covr"; version="3.3.1"; sha256="0fvd7v53w11x6kaw61hbml8n1j2ck9l2fv2wvqdsg689xic9rqcs"; depends=[crayon digest httr jsonlite rex withr yaml]; }; + covr = derive2 { name="covr"; version="3.4.0"; sha256="0p44kr6yz5sqza5zvq6divqglzkpv0if9pjpjmzhmdaaddjrqzg5"; depends=[crayon digest httr jsonlite rex withr yaml]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.1.0"; sha256="19dvwhl85yx9ddwxvnq5sdd534s6llcw61gckrav48hq49x1bqld"; depends=[mvtnorm]; }; cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; }; @@ -6279,7 +6391,7 @@ in with self; { coxed = derive2 { name="coxed"; version="0.3.0"; sha256="01fwkw6ba8zj09a7mzm7rja188rapd6knwjq247pm4panqih8m5l"; depends=[dplyr ggplot2 gridExtra mgcv PermAlgo rms survival tidyr]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-14"; sha256="0pcmf44c3v1hvr8031lwgib58j6la5hsphsbc57mcgz09ppw30zg"; depends=[bdsmatrix Matrix nlme survival]; }; - coxmeg = derive2 { name="coxmeg"; version="1.0.7"; sha256="0mgjipbaa8qm23gyndi4x1pllzrkvfs5lnlifk6mya5vgkxxzm3g"; depends=[coxme knitcitations MASS Matrix matrixcalc nloptr rARPACK Rcpp RcppEigen SNPRelate]; }; + coxmeg = derive2 { name="coxmeg"; version="1.0.9"; sha256="19p2j6i34jg6akfyr6hv2xmashpsvf8y5bbql6a62b3f5yz5639v"; depends=[coxme MASS Matrix matrixcalc microbenchmark nloptr rARPACK Rcpp RcppEigen SNPRelate]; }; coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; }; coxphf = derive2 { name="coxphf"; version="1.13"; sha256="16bman8xv5xx7gg8s54sj3hc4isqxk4h3q93h4q3h3j0bdvww2yy"; depends=[survival]; }; @@ -6304,6 +6416,7 @@ in with self; { cpt = derive2 { name="cpt"; version="1.0.2"; sha256="0j9ns8qhcvwxnzl9rc59vmh5jdahnni5dxpmi38gxvvj5k9hd8p7"; depends=[glmnet MASS nnet randomForest]; }; cptcity = derive2 { name="cptcity"; version="1.0.4"; sha256="1agknys80m16xq0x285sdf1452a6dmghysrhy7s6zfcb59acb1nf"; depends=[]; }; cptec = derive2 { name="cptec"; version="0.1.0"; sha256="1sh6vs9qfxxlhlg6y2qchikjg8sh64zg3j8x5b9dpba9lhbhzzqj"; depends=[magrittr rvest xml2]; }; + cqcr = derive2 { name="cqcr"; version="0.1.2"; sha256="11bcqr4bw11vjqdgddpfjb4dsk0dxdasddkp1g310l71vw7zaryg"; depends=[anytime dplyr httr jsonlite purrr rlang snakecase]; }; cqrReg = derive2 { name="cqrReg"; version="1.2"; sha256="1sn8pkbqb058lbysdf2y1s734351a91kwbanplyzv3makbbdm4ca"; depends=[quantreg Rcpp RcppArmadillo]; }; cquad = derive2 { name="cquad"; version="2.1"; sha256="1cq57qd33cbzhgnnw4fk36xch0prwr9a404sxi7b4ijwgzw84d0h"; depends=[MASS plm]; }; cr17 = derive2 { name="cr17"; version="0.1.0"; sha256="1zyq77gxycbwyqhv5w0zw4n7v3ipjs6rcbja43g0k5q8h0gjnnn1"; depends=[cmprsk dplyr ggplot2 gridExtra gtable scales survival]; }; @@ -6311,7 +6424,7 @@ in with self; { crank = derive2 { name="crank"; version="1.1-2"; sha256="0wwbdh5sfi2bg13nrlkxxij4k053kjx9afm4gjpgs6iir6pml711"; depends=[]; }; cranlike = derive2 { name="cranlike"; version="1.0.2"; sha256="06xgxgwpmfrwmcd0gnr9prjjbhd1y0ky1zb8yh09v0bvsf6ixnyx"; depends=[DBI debugme desc RSQLite]; }; cranlogs = derive2 { name="cranlogs"; version="2.1.1"; sha256="02d9qrqyjj33naq3g7ykaw9dzzl1dq8qf13id6h7kfx1fvx9b7zd"; depends=[httr jsonlite]; }; - cranly = derive2 { name="cranly"; version="0.5.3"; sha256="15ngklyqjp0yxz42ijhfpvraxd549fidj1k4b1s1v3iilwvsd7q4"; depends=[colorspace countrycode ggplot2 igraph magrittr stringr tm visNetwork wordcloud]; }; + cranly = derive2 { name="cranly"; version="0.5.4"; sha256="02g3r8y3yj6pajjzzf7akgpjgg6vnv3mp9pqpqcfrrckvmvysm35"; depends=[colorspace countrycode ggplot2 igraph magrittr stringr tm visNetwork wordcloud]; }; crantastic = derive2 { name="crantastic"; version="0.1"; sha256="0y2w9g100llnyw2qwjrib17k2r2q9yws77mf6999c93r8ygzn4f5"; depends=[]; }; crassmat = derive2 { name="crassmat"; version="0.0.6"; sha256="1c4ii34vh8y5b3z2maby4cafb3n2m9bnxv3762cy0z12mbg7zk1s"; depends=[svMisc]; }; crawl = derive2 { name="crawl"; version="2.2.1"; sha256="18mr7vp72jj5msj9mbq45jy3f6qhn45azsmkq07i2d30gwdj0c3a"; depends=[dplyr gdistance lubridate magrittr mvtnorm purrr raster Rcpp RcppArmadillo rmapshaper sf shiny sp tibble]; }; @@ -6319,7 +6432,7 @@ in with self; { crblocks = derive2 { name="crblocks"; version="1.0-0"; sha256="0y101kgi7ryjv18fyjp0ralp4qj7kgshmbd4mf7n3hdjay0znss5"; depends=[]; }; crch = derive2 { name="crch"; version="1.0-4"; sha256="18qjvh1lkw1f6rrhnb21f30xxrcq8whbs3x1jgkw6q14rf1483ri"; depends=[Formula ordinal sandwich scoringRules]; }; credentials = derive2 { name="credentials"; version="1.1"; sha256="0izwskymymkxdwsdj7zapqpkc6g37c0m6c2na0y00s1kwr73d2qd"; depends=[askpass curl jsonlite openssl sys]; }; - creditmodel = derive2 { name="creditmodel"; version="1.1.4"; sha256="1vk7y3xc3wjaq7yba2pa4llb3zqrqxgy0b0wa3qc50ncg61n7r2m"; depends=[cli data_table doParallel dplyr foreach gbm ggplot2 glmnet pdp randomForest rpart xgboost]; }; + creditmodel = derive2 { name="creditmodel"; version="1.1.6"; sha256="185pwcs50ssn24lm63waaq8pbyran11q848wwd9pphlminfw9wy4"; depends=[cli data_table doParallel dplyr foreach ggplot2 glmnet rpart xgboost]; }; credsubs = derive2 { name="credsubs"; version="1.0.1"; sha256="0n3684fxknvvs57g2vjqykgdjfbpl6242nd23sm9nv2fn57q8k2c"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; cregg = derive2 { name="cregg"; version="0.3.0"; sha256="08dhn4i5i27zw3ayqp7lkw5z8dzckv8fhflpvz0mphax34pm3z72"; depends=[ggplot2 ggstance lmtest sandwich scales survey]; }; @@ -6345,7 +6458,7 @@ in with self; { crossrun = derive2 { name="crossrun"; version="0.1.0"; sha256="0br57nraqhs5f1cpidc8kd31izm82wvhiw9pxcdj9v51l9vifbmx"; depends=[Rmpfr]; }; crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; - crosswalkr = derive2 { name="crosswalkr"; version="0.2.4"; sha256="1jn2l3b1ghb6rplj79n5p1wj044fl77v2r72vq5lcd6qxgfzv0rr"; depends=[dplyr haven labelled readr readxl tibble]; }; + crosswalkr = derive2 { name="crosswalkr"; version="0.2.5"; sha256="1bzfcvyknbds64f31d8azl2s0spsrja9abmk5lnyvwr1v76hggwb"; depends=[haven labelled readr readxl tibble]; }; crossword_r = derive2 { name="crossword.r"; version="0.3.6"; sha256="1s31613s4qxxspka9bhgq3rq8xraf48mwfv6phvz6v06gijh64lr"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; crov = derive2 { name="crov"; version="0.1.3"; sha256="0gvrki9ldm3yrnp6zx2awqg4p3pqjzv1088gn3nbg00j0i3s9m5h"; depends=[gtools VGAM]; }; crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; }; @@ -6354,18 +6467,18 @@ in with self; { crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; - crs = derive2 { name="crs"; version="0.15-31"; sha256="0h8hhxnyy8lf7jpnvriaa5dn3zgp1yqhfrnc5rpjlzsx2lnyyv9r"; depends=[boot np quantreg rgl]; }; + crs = derive2 { name="crs"; version="0.15-31.1"; sha256="1p16nnxskjf3fdrdm5y1n5zj0acyrmc73ff75rgry1b1fd4yk61x"; depends=[boot np quantreg rgl]; }; crseEventStudy = derive2 { name="crseEventStudy"; version="1.2"; sha256="1fgjj78p54fk0bkvx0fq1h7c5j4c64g10cdjzmmqhhxlyjwp5z7y"; depends=[sandwich]; }; crskdiag = derive2 { name="crskdiag"; version="1.0.1"; sha256="0100wbyvchx6jwlrwc6rwhdjanips5c0f5zqzs2c0dgwygpqw30w"; depends=[cmprsk]; }; crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crso = derive2 { name="crso"; version="0.1.1"; sha256="1r10vz8z5y52a5v5phw22fhqwv9p7g66xfsx0906bcx74dn3f2b3"; depends=[foreach]; }; crsra = derive2 { name="crsra"; version="0.2.3"; sha256="1rkqm88zmvp9gw442cby6qpvfw4pfw65wz0gyl2h37w87c3wwvrw"; depends=[digest dplyr knitr purrr rcorpora readr tibble tidytext]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; - crul = derive2 { name="crul"; version="0.8.4"; sha256="12scs09qk9d7jrgs4fn98v4bvjdmphd5nqamb5d2wh387fnm1nfv"; depends=[curl httpcode jsonlite mime R6 urltools]; }; + crul = derive2 { name="crul"; version="0.9.0"; sha256="1h1iyp625x2fx22dai9y0pmg64q65p9iiilkkd0qlr1ir9ljrd57"; depends=[curl httpcode jsonlite mime R6 urltools]; }; crunch = derive2 { name="crunch"; version="1.26.1"; sha256="01ajcvn31nb8cdmqmalmxvp1pvh7nmd9fyg2fc1zm7yy3a2klp9l"; depends=[crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.3.1"; sha256="1qvwzym2hj61zjlm7j34j8jl5kfpkpx35xfjjyl5y35a5y50sz8g"; depends=[crunch httpcache miniUI rstudioapi shiny]; }; cruts = derive2 { name="cruts"; version="0.5"; sha256="08mklbmwgaq6cf3hd40mingplwjss5im30l5j6nmy7lijp15nq7k"; depends=[lubridate ncdf4 raster sp stringr]; }; - crypto = derive2 { name="crypto"; version="1.1.1"; sha256="1kcldvl1rm363ah46hna6lcv8fkc48gp4d1vm24iig8fmi5rxa4x"; depends=[cli crayon curl dplyr httr jsonlite lubridate progress rstudioapi rvest tibble tidyr xml2 xts]; }; + crypto = derive2 { name="crypto"; version="1.1.2"; sha256="03cq0yg6110a4qfh0hzq7n6bclddkz1vbqjcjwn7v219nqamyrvm"; depends=[cli crayon curl dplyr httr jsonlite lubridate progress rstudioapi rvest tibble tidyr xml2 xts]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; }; @@ -6384,13 +6497,10 @@ in with self; { ctl = derive2 { name="ctl"; version="1.0.0-2"; sha256="1gpb43zn411l476dby2g38qkcvh2fsdcvbkr9jb274l1154km1xm"; depends=[MASS qtl]; }; ctmcd = derive2 { name="ctmcd"; version="1.4.1"; sha256="01nflgdyb70kh4f8bnxpavr31fz4fh02kgz2nlx3zzblnm2idbcx"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; ctmcmove = derive2 { name="ctmcmove"; version="1.2.9"; sha256="1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0"; depends=[fda gdistance Matrix raster sp]; }; - ctmle = derive2 { name="ctmle"; version="0.1.1"; sha256="1k9nr2xbaqrbpp31vdcnmpwyazcw79k0r3gbcbinva4pgv2psp29"; depends=[glmnet SuperLearner tmle]; }; - ctmm = derive2 { name="ctmm"; version="0.5.6"; sha256="04jpmjlpnh8zmk6l14sll945s5bjgkcwnj11yq5297nbggl4wmsx"; depends=[data_table expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape]; }; + ctmm = derive2 { name="ctmm"; version="0.5.7"; sha256="02i9k42raxy8ry1c4ydh96hfn1wvjp09yqppvlbhxbi56z9xj5ln"; depends=[data_table expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp]; }; ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; }; - ctrdata = derive2 { name="ctrdata"; version="0.18.2"; sha256="1nnqfg7x6wq5lzb4xxb52fb8ljxgnbwswfywv1d4ibcn7m5y0947"; depends=[clipr curl httr jsonlite mongolite rvest xml2]; }; ctrlGene = derive2 { name="ctrlGene"; version="1.0.1"; sha256="0x7j11v7jj4k1jml6lrnjq79awhrvsm3pig1yxsd337jlfml3ra9"; depends=[psych]; }; - cts = derive2 { name="cts"; version="1.0-22"; sha256="0kcbppfsx1hvnsz6nmj8frrqrglcr6cmasd1ma34qkqb9f6q0xry"; depends=[]; }; - ctsem = derive2 { name="ctsem"; version="3.0.4"; sha256="0q21xf7f1njjdlvvwbp1nls18phrhdi67s2xwb2qhj078qra7zwb"; depends=[BH cOde data_table Deriv ggplot2 MASS Matrix mize mvtnorm OpenMx pkgbuild plyr Rcpp RcppEigen rstan rstantools StanHeaders]; }; + ctsem = derive2 { name="ctsem"; version="3.0.8"; sha256="1wwv4abnjxsp62yz09l1jpkzxk41cb0g651lx849hmw8j12z03an"; depends=[BH cOde data_table Deriv ggplot2 MASS Matrix mize mvtnorm OpenMx pkgbuild plyr quantreg Rcpp RcppEigen rstan rstantools StanHeaders]; }; ctv = derive2 { name="ctv"; version="0.8-5"; sha256="0kl6z8dbbjgm29q0c5xy6lihjgf5cdihrllm27x0zbcvy8lyl51p"; depends=[]; }; cubature = derive2 { name="cubature"; version="2.0.3"; sha256="0wvs80i4axj7pdcy9gjl08qzjbcjkldha94xy4gdxc34vgmh7gvr"; depends=[Rcpp]; }; cubeview = derive2 { name="cubeview"; version="0.2.0"; sha256="1352hi2j9x9rx4iy3xvsca86nsh39x1vnymd17f5qc8c3plfm8db"; depends=[base64enc htmltools htmlwidgets lattice raster stars viridisLite]; }; @@ -6400,7 +6510,8 @@ in with self; { cumSeg = derive2 { name="cumSeg"; version="1.2"; sha256="0ix8g3w04n799pppyhyd365bdx9cwrgn7k7qljs1fdiq8s135wzk"; depends=[lars]; }; cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; - curl = derive2 { name="curl"; version="4.2"; sha256="0xh227gvb056wlipjxxbf555z1i1qcs7rr1igvs6k6645y9irrlp"; depends=[]; }; + cumulocityr = derive2 { name="cumulocityr"; version="0.1.0"; sha256="0ybvh5args3s1f3nra58bnfwgrlrdpw40by68az84s90v88bbz2q"; depends=[httr jsonlite]; }; + curl = derive2 { name="curl"; version="4.3"; sha256="1nrf6md41b37j424y6rvifdj9zb3j14f60fj7q71k9jhpf2x81kl"; depends=[]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; cursory = derive2 { name="cursory"; version="1.0.0"; sha256="0jyfp0i43fxh91n4s8r54hnzmq1y037176c8bv2q3fqjm1adibxy"; depends=[dplyr pkgcond purrr rlang tibble tidymargins tidyr tidyselect]; }; @@ -6423,16 +6534,18 @@ in with self; { cvcqv = derive2 { name="cvcqv"; version="1.0.0"; sha256="0327r4jw6m4avcz1zvdkxszqwaw2s9sh1i1jagl6aggd7aaiiyg0"; depends=[boot dplyr MBESS R6 SciViews]; }; cvcrand = derive2 { name="cvcrand"; version="0.0.4"; sha256="1150vn753m95gpc1clyf4xzzgwmnzdh83prw8a3ikps0l6grvrps"; depends=[tableone]; }; cvequality = derive2 { name="cvequality"; version="0.2.0"; sha256="1im839vzfqylphp2vr20avnzkyl02n88fngbs63d4ik7c72d9992"; depends=[]; }; + cvmdisc = derive2 { name="cvmdisc"; version="0.1.0"; sha256="19b9kxqgbk1d631l3jph87pzhk4zf3xd5q5j2xsrbqz8zmm96sn9"; depends=[CompQuadForm]; }; cvmgof = derive2 { name="cvmgof"; version="1.0.0"; sha256="0rnd7icqjprhbpmn383ah4fi5nz0hmg88fa612fmivkvnpn79v6j"; depends=[lattice]; }; - cvms = derive2 { name="cvms"; version="0.3.1"; sha256="0916wzyh4rg3m2visnm8nc9qsab6rj4xvwyc3jqryciw2a10c59n"; depends=[broom caret data_table dplyr ggplot2 lifecycle lme4 mltools MuMIn plyr pROC purrr rlang stringr tibble tidyr]; }; + cvms = derive2 { name="cvms"; version="0.3.2"; sha256="0k7v5m95dqanm8hb8j4jx4r4phxx8zrl9nagqampy2sgiwlld6wg"; depends=[broom caret data_table dplyr ggplot2 lifecycle lme4 mltools MuMIn plyr pROC purrr rlang stringr tibble tidyr]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; cvxclustr = derive2 { name="cvxclustr"; version="1.1.1"; sha256="0idmx4wgz4d0b1xzmlq5bsk2f2q38lpf9c117hg97xsfndzn7vqj"; depends=[igraph Matrix]; }; + cwbtools = derive2 { name="cwbtools"; version="0.1.0"; sha256="0wdg559y3bcrvw0f2gyhbkbvp8hc00qz1h3xnhb52qp9siq8r6pl"; depends=[curl data_table pbapply R6 RcppCWB stringi xml2]; }; cwhmisc = derive2 { name="cwhmisc"; version="6.6"; sha256="1pf365g4f51cfrhlff9mqw2ddvkps0abax17zcn3vw1ba2djalnp"; depends=[lattice]; }; cwm = derive2 { name="cwm"; version="0.0.3"; sha256="1ln2l12whjhc2gx38hkf3xx26w5vz7m377kv67irh6rrywqqsyxn"; depends=[MASS matlab permute]; }; cxhull = derive2 { name="cxhull"; version="0.2.0"; sha256="1m03ym83ghgmb0j14aihfj6divmnr13f5s9jwknicjsxz3p3divk"; depends=[]; }; cxxfunplus = derive2 { name="cxxfunplus"; version="1.0"; sha256="0kyy5shgkn7wikjdqrxlbpfl3zkkv4v1p8a1vv0xkncwarjs4n8d"; depends=[inline]; }; - cyanoFilter = derive2 { name="cyanoFilter"; version="0.1.1"; sha256="1fgmh9138zwajply3namh4wnq5z29w9khajf9hna7pg2p6ks8vby"; depends=[Biobase flowCore flowDensity RColorBrewer Rdpack stringr]; }; + cyanoFilter = derive2 { name="cyanoFilter"; version="0.1.2"; sha256="0nf76pwmgz9qp297dgp9qql4r8y468sa0mcy423hq13yp1swgx6w"; depends=[Biobase flowCore flowDensity RColorBrewer Rdpack stringr]; }; cycleRtools = derive2 { name="cycleRtools"; version="1.1.1"; sha256="1l7w2lm4s149ndd85v41pkdrdig6l3nmhl14bdx56aw8q57fxmb0"; depends=[Rcpp xml2]; }; cyclestreets = derive2 { name="cyclestreets"; version="0.1.5"; sha256="1wvg43wrnh0lz2pkkrbidzdsrkypdl2r4ccs9jhdsj8ixm158dvf"; depends=[httr jsonlite magrittr sf stringr]; }; cyclocomp = derive2 { name="cyclocomp"; version="1.1.0"; sha256="0gky3svk02wiajw7nfjh30684h3qxili4bvsab0m7b6cggw6bgyd"; depends=[callr crayon desc remotes withr]; }; @@ -6453,13 +6566,13 @@ in with self; { dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.1"; sha256="1c1xz1f1fp937w4rlylvqv3ii0p9dafvmn4fqq8rzxhcg5rn9j4l"; depends=[Rcpp]; }; - dLagM = derive2 { name="dLagM"; version="1.0.17"; sha256="01jm0y4br86iznlr8mpvvfwz12rqipwyy3adlic97mr401845bqq"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll strucchange wavethresh]; }; + dLagM = derive2 { name="dLagM"; version="1.0.19"; sha256="0bvzyv6hbs9n21gz2s24gmpzyxak6630j7dc9d6bzis1s2v08rda"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll strucchange wavethresh]; }; dMod = derive2 { name="dMod"; version="1.0.0"; sha256="1mj2a9hpfldxbsiggi27nz3w0klp7qwpplpwh4bi9ik25vll25a0"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; daarem = derive2 { name="daarem"; version="0.4"; sha256="00gcy23yzwsfxvys7hncgshma73df0wzwnxgwvccppn3z213sg50"; depends=[]; }; dabestr = derive2 { name="dabestr"; version="0.2.2"; sha256="10vzp28bx4vf9jc3l9jjw94wir75j8h60lcncafbdwvxjh5alpfs"; depends=[boot cowplot dplyr ellipsis forcats ggbeeswarm ggforce ggplot2 magrittr rlang simpleboot stringr tibble tidyr]; }; dad = derive2 { name="dad"; version="3.3.0"; sha256="1154jk4j1h5wr3c68pj0slh90jxccia28wpmygn9mz0mlvx9km9l"; depends=[DescTools e1071 lattice]; }; - dae = derive2 { name="dae"; version="3.0-32"; sha256="0syv6kjnicb0x7sxbaavxhiv9mcqvc2zzbf4wyar933q3hzrxnrd"; depends=[ggplot2 plyr]; }; + dae = derive2 { name="dae"; version="3.1-16"; sha256="089c19h5msq6j1hs2791x385g6nxgvhr89gxrgdybvwb8z2bbdwq"; depends=[ggplot2 plyr]; }; daewr = derive2 { name="daewr"; version="1.1-7"; sha256="01n9g3adjk66wx9lm9gl6wa3y9ba5w0w0p5ayj8rx5ywxnm8fnvi"; depends=[BsMD FrF2 lattice]; }; daff = derive2 { name="daff"; version="0.3.5"; sha256="00zcdf215m7p3xm9yv571v09znhdqacxg69hb5b5j749mp4wdsyj"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; @@ -6469,7 +6582,7 @@ in with self; { dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; }; damr = derive2 { name="damr"; version="0.3.4"; sha256="19rffdrgx9c03f66qgj1gwp5vra89n3jrrb54i9xl2rxsf28ry3h"; depends=[behavr data_table readr]; }; dams = derive2 { name="dams"; version="0.2"; sha256="0hf5s8i61r5q4h3s8dfmdl3vkj7v15ha59pjvpjqx3yihsgziqz9"; depends=[RCurl]; }; - dang = derive2 { name="dang"; version="0.0.10"; sha256="1q4378wvn0fmvm3gqb0si9x5sq0dh6mkxzhxbh570npjhb15p272"; depends=[]; }; + dang = derive2 { name="dang"; version="0.0.11"; sha256="14bxzbkrqzs0ic7n4rlaa429lwdgldlcx97h8l7ma6jh8c0fx3qr"; depends=[]; }; dani = derive2 { name="dani"; version="0.1-0"; sha256="05npr3i49wn01rbcsr1pfbb0d5l8c0pz48q961v28s6kdxp0vwr3"; depends=[Epi]; }; dapr = derive2 { name="dapr"; version="0.0.3"; sha256="136chxijyxrl5sbiggxf56zga26zqds647z1z2igwn5mdff1wxyb"; depends=[]; }; darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; }; @@ -6477,13 +6590,13 @@ in with self; { darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; dat = derive2 { name="dat"; version="0.4.0"; sha256="1nw16hsw9b4hpcl5rqrlw6yk9y2h1pd0ra1c7iz82sknkyd5afi6"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; - data_table = derive2 { name="data.table"; version="1.12.4"; sha256="0zdcbr4nixvl8ga4mp9pw1dfww35dzhzpb6ixajqasiri824m7i9"; depends=[]; }; - data_tree = derive2 { name="data.tree"; version="0.7.8"; sha256="05svd1h70dn92imadw2djqqvchx30md74d4z6a00grkajj16cchb"; depends=[DiagrammeR R6 stringr]; }; + data_table = derive2 { name="data.table"; version="1.12.6"; sha256="1kgbnm5gv7ax7qn8irpz7qsry2ci21axga8y7qpkidcqkxkkndn2"; depends=[]; }; + data_tree = derive2 { name="data.tree"; version="0.7.11"; sha256="1mm27p3k2qw77wqrx05qs39nazcgpn0af0ahlps4gm62fs9pzddq"; depends=[R6 stringr]; }; data_world = derive2 { name="data.world"; version="1.2.2"; sha256="1d9hh4965f2d0lwh2xxhnxzc948ailkjzdax3d3z9l8lakqfrx0h"; depends=[dwapi httr ini miniUI shiny stringi]; }; dataCompareR = derive2 { name="dataCompareR"; version="0.1.2"; sha256="0n10dqnrlpwafxys68b3ly156235lhqby71qay0vb0r6bvl2g349"; depends=[dplyr knitr markdown stringi]; }; dataMaid = derive2 { name="dataMaid"; version="1.3.2"; sha256="10c5b1xp1mca5h0vdqikfn549jf981xk7c2rcpq71rf0fng93qz6"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase stringi whoami]; }; dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; }; - dataPreparation = derive2 { name="dataPreparation"; version="0.4.1"; sha256="0jxfvsx7wvsnhvlxb65a041pd3va7slryrblpbpj5xbnbdpyi4i7"; depends=[data_table lubridate Matrix progress stringr]; }; + dataPreparation = derive2 { name="dataPreparation"; version="0.4.2"; sha256="12707zncdzsj05gw336g37qigbzq3iqmxx7agca32prx0mj39wdj"; depends=[data_table lubridate Matrix progress stringr]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.5"; sha256="0aagj04x5792rp73h5lwvrx63nh739jn3cmhhrzchm9symq8x8mx"; depends=[curl httr jsonlite lubridate readr xml2]; }; datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; }; @@ -6492,17 +6605,17 @@ in with self; { datadr = derive2 { name="datadr"; version="0.8.6.1"; sha256="1x8j34gj5c5arr1iqxfx8cs8hjapylvfjsnh4k6a34z65r83h93y"; depends=[codetools data_table digest dplyr hexbin magrittr]; }; dataesgobr = derive2 { name="dataesgobr"; version="1.0.0"; sha256="10znkaq45m4bgiyjx4x8s6ilvxlry6h0z54pkg8jgmblrpfazmqb"; depends=[dplyr DT httr jsonlite readODS readr readxl shiny shinycssloaders shinyFiles shinyjs shinythemes stringi stringr yaml]; }; dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; - datafsm = derive2 { name="datafsm"; version="0.2.2"; sha256="1q4vfvpvlp127lh6y2ls59gg8dg20syv0sqrwa7sfnml6ysb21q2"; depends=[caret GA Rcpp]; }; + datafsm = derive2 { name="datafsm"; version="0.2.3"; sha256="18q6s8sz8bm2xlfvhj0x5sagpn363s3k21s428wd0bqzqlppwbmb"; depends=[caret GA Rcpp]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamaps = derive2 { name="datamaps"; version="0.0.3"; sha256="00pvns98miq56z3prbb5qg608d5ns9wbp0711x3mmqg0bld1xwmp"; depends=[htmlwidgets magrittr]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; dataone = derive2 { name="dataone"; version="2.1.2"; sha256="0rdn2jjqxkyf77xfbxy1zkdgrfhrcwd1dagidn0hynrldfj4r3iw"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; - datapack = derive2 { name="datapack"; version="1.3.1"; sha256="0hzc68vgjvpm235zg8k2642c3jzh3ls9kp6lpz720y1b56q8k3n7"; depends=[digest hash redland uuid XML]; }; - datapackage_r = derive2 { name="datapackage.r"; version="0.1.1"; sha256="1f5mm3cb2yz3dzxj26pp7w1rb8jccyj7zjl602d3mcfxc9d99643"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; + datapack = derive2 { name="datapack"; version="1.3.2"; sha256="0v9m7fbzi1w5p3arb0ywl4yglyw87civc59ndqsdm8rp84gbvnbl"; depends=[digest hash redland uuid XML]; }; + datapackage_r = derive2 { name="datapackage.r"; version="0.1.2"; sha256="0y4adfgdf2k04aaimxzj1fz50j6w6fqc8gvjls47nlqhi3dgmdav"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; datapasta = derive2 { name="datapasta"; version="3.0.0"; sha256="022ci7iy683lh3fh13a4b3szzqp6j4fchil695bifhi0a34bnxyr"; depends=[clipr readr rstudioapi]; }; datarium = derive2 { name="datarium"; version="0.1.0"; sha256="1v98yxsxhfqlalz5qy3x5axb7fy067vf3y0qg7ngixphmy9qybym"; depends=[]; }; - datarobot = derive2 { name="datarobot"; version="2.14.2"; sha256="0vjka8sdn4ywxwwf6jwrsjp2c17gx7lz62cgqbp3l2ry7jx4acfd"; depends=[curl httr jsonlite yaml]; }; + datarobot = derive2 { name="datarobot"; version="2.15.0"; sha256="1s3q83g8sjff7k0irv26kbnsd3h16hbw3qilqnvb9q824qza4psd"; depends=[curl httr jsonlite yaml]; }; datasauRus = derive2 { name="datasauRus"; version="0.1.4"; sha256="1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; datasets_load = derive2 { name="datasets.load"; version="0.3.0"; sha256="13ywnqln831i5hlf1cpqcyc77blg99w8jvy8jic17z86fjxh4gim"; depends=[DT miniUI shiny]; }; @@ -6534,7 +6647,7 @@ in with self; { dbparser = derive2 { name="dbparser"; version="1.0.4"; sha256="0s69da7czznnmv2kgipss1cdklx5ijh0q5aa2lg2gx3an1rjbgp2"; depends=[DBI odbc purrr readr RMariaDB tibble tidyr XML]; }; dbplot = derive2 { name="dbplot"; version="0.3.2"; sha256="0xw1zjvf1fa092kyryq2pk7dd4y60ka8yczaxk0f231mmsm1741p"; depends=[dplyr ggplot2 purrr rlang]; }; dbplyr = derive2 { name="dbplyr"; version="1.4.2"; sha256="1q2dflr88s5a1amzfld3087q422vf70052qn84zyd8895kdg10xp"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; - dbscan = derive2 { name="dbscan"; version="1.1-4"; sha256="1ps5fyxsshk08jv1y9mapsa14pdk2y4nvf9q10n80lwl5idigy21"; depends=[Rcpp]; }; + dbscan = derive2 { name="dbscan"; version="1.1-5"; sha256="1vh29nmmana2755zcy15i1mhj3amwc2r84cq9d71wqr7ygzynphk"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; }; dbx = derive2 { name="dbx"; version="0.2.5"; sha256="1g1pm0zw667m0wdzndak1qzym527lcl6gmdfzi5b3rlinkk2y0s2"; depends=[DBI]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; @@ -6547,7 +6660,7 @@ in with self; { dcmodify = derive2 { name="dcmodify"; version="0.1.2"; sha256="093rh3r3n0wjdpx861xiqd1zqd5v1v9rzxgcynz4awr7jbm5xszi"; depends=[settings validate yaml]; }; dcurver = derive2 { name="dcurver"; version="0.9.1"; sha256="1cfy0j3rmi3laszrgd3i59cfy4xfs2p6h9dcwbkwq6wnshrpypfn"; depends=[Rcpp RcppArmadillo]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; - ddalpha = derive2 { name="ddalpha"; version="1.3.9"; sha256="1vzs0cvl6xw3h9i00rg3hs02xwgxcnh8326y10kxmhs3qq4m7nb2"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; + ddalpha = derive2 { name="ddalpha"; version="1.3.10"; sha256="1064g7y8d7kmvd5kjc2m48yvidmh2ci1y0xgil3pcx4ix6mf0ljz"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; dde = derive2 { name="dde"; version="1.0.0"; sha256="0fsj7n66j0dhp65c6f9k0dsrkklj1hy4w376j150f91jc7m3wliv"; depends=[ring]; }; ddiv = derive2 { name="ddiv"; version="0.1.0"; sha256="1r2sxlkw1vxf2svdi1nary3hb7c5k1b4j820mj268r9swmy632ch"; depends=[MASS segmented]; }; ddpca = derive2 { name="ddpca"; version="1.1"; sha256="1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1"; depends=[MASS Matrix quantreg RSpectra]; }; @@ -6556,10 +6669,10 @@ in with self; { ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.0"; sha256="1wl1pw1rwins4gr47a8ii4diw6wd6cx8ib4l5bhri5f3crbw7l86"; depends=[deSolve gdata gptk]; }; - deSolve = derive2 { name="deSolve"; version="1.24"; sha256="0hkvspq0fp8j64l9zayab2l2nazazhwfgfym0jllh0xv5a12r99s"; depends=[]; }; + deSolve = derive2 { name="deSolve"; version="1.25"; sha256="0735y3p5glhqx69rzrc8qgmvs7p7w0p98qxmvylb6bgqp6kp0cbp"; depends=[]; }; deTS = derive2 { name="deTS"; version="1.0"; sha256="08yq7vfcd8fv8qw2w0f1rnj3rzys9kslmkqspmiz6prmzqvj1zf1"; depends=[pheatmap RColorBrewer]; }; - deTestSet = derive2 { name="deTestSet"; version="1.1.6"; sha256="0n04p05fcaksiqm59pn3r58ihqwbd5r7jxgfvbw05s9l4q46nh3c"; depends=[deSolve]; }; - deaR = derive2 { name="deaR"; version="1.1.0"; sha256="0q36cfjb1vypn2d581rpfilzspvxmfb97phcnvp2w6l98kx8gcvj"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; + deTestSet = derive2 { name="deTestSet"; version="1.1.7"; sha256="0l73c0lwmbpg9prwy3hyd4m9q8r6689pdm47agyv59vj0839s25p"; depends=[deSolve]; }; + deaR = derive2 { name="deaR"; version="1.2.0"; sha256="1p3lsck0zwzfgjxyvzgvxig9g5p7i67pf71hrhzpmkxvafafx9jw"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; deal = derive2 { name="deal"; version="1.2-39"; sha256="0sw0v1mm004ky1gjw3dmvf2vb7nf2j9s9386bhqxijw63j7xnjd3"; depends=[]; }; deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; @@ -6567,7 +6680,7 @@ in with self; { debugr = derive2 { name="debugr"; version="0.0.1"; sha256="0lfq0s0hibd00558vl3dmvrkzxjc7q62xr8sqzai0pv9a9lhixcn"; depends=[rprojroot rstudioapi]; }; decido = derive2 { name="decido"; version="0.2.0"; sha256="17myg67qry1sbd1scv9bbvdh67fpcnqcb6r8n0kajdxb96vnlqk0"; depends=[Rcpp]; }; decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; - decisionSupport = derive2 { name="decisionSupport"; version="1.103.8"; sha256="1xp97v22ar4nsv2q4di6rqfin7pa7a6zqw5d1zmm5aqxfi07nc4x"; depends=[chillR msm mvtnorm nleqslv rriskDistributions]; }; + decisionSupport = derive2 { name="decisionSupport"; version="1.105.2"; sha256="095qwgsw6y1clv2hyjr56s2wg8q1nhd22ikh9b3l2mcsw2xdzvjy"; depends=[chillR fANCOVA ggplot2 msm mvtnorm nleqslv rriskDistributions]; }; deckgl = derive2 { name="deckgl"; version="0.1.8"; sha256="0nm9jf166343sd01mchw2v6qpsfjgdhf6zd2p92rqyhp9k0hq5lv"; depends=[base64enc htmltools htmlwidgets jsonlite magrittr readr tibble yaml]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; decoder = derive2 { name="decoder"; version="1.1.13"; sha256="1kpcx754djfr8y0flpa1hrr92s0wbxw23rlvb6q3k9absvdvvmg6"; depends=[backports]; }; @@ -6600,7 +6713,7 @@ in with self; { demogR = derive2 { name="demogR"; version="0.6.0"; sha256="06x82ffbdv6ifl8xh52d3npdwha67v1ylfjp78j5pa4wdqkg221b"; depends=[]; }; demography = derive2 { name="demography"; version="1.22"; sha256="1m15capbfknr4rqxmfgj1vb7rmgambk6r9ic37149525sg7wn3j6"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; demu = derive2 { name="demu"; version="0.2.0"; sha256="0prfl2i3q2n5f4qpvkksyi8qvwj2fd9v82cr6val7abvcvbn9276"; depends=[ClusterR fields Matrix Rcpp RcppArmadillo spam]; }; - dendextend = derive2 { name="dendextend"; version="1.12.0"; sha256="0mgsc9qkr5p6hss3wychdjvk263ay48yx543wawj72l7q7cgx1xl"; depends=[ggplot2 magrittr viridis]; }; + dendextend = derive2 { name="dendextend"; version="1.13.2"; sha256="1iclvd9cyckd4djpa87ynm05fk6zl4b4m735za1w4irimc130m3r"; depends=[ggplot2 magrittr viridis]; }; dendroTools = derive2 { name="dendroTools"; version="1.0.6"; sha256="0y323sa1ccp6sr95rs9chm4mwxxja9dhjvg67lac2lf41a6yg5yb"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; @@ -6613,11 +6726,11 @@ in with self; { densityClust = derive2 { name="densityClust"; version="0.3"; sha256="1zry0vafajzmr37aylglxfvwplhdygbkb9cvzvh8cy0xgnjrnx13"; depends=[FNN ggplot2 ggrepel gridExtra RColorBrewer Rcpp Rtsne]; }; densratio = derive2 { name="densratio"; version="0.2.1"; sha256="0x333kfx5mdzzjsqy37j4bmv9iddlgp3wi4774lx8d159lbr6irp"; depends=[]; }; denstrip = derive2 { name="denstrip"; version="1.5.4"; sha256="0hzxphj740q6pfa1q42knr7n12bmnawg7b2fs74msxn83dka5cmq"; depends=[lattice]; }; - denvax = derive2 { name="denvax"; version="0.1.1"; sha256="0yc7cks18k1pq6cdjpqmyvb2n8ljbw201fbnwx18r8p93c9493ry"; depends=[]; }; + denvax = derive2 { name="denvax"; version="0.1.2"; sha256="0a8x7z7jagshc5h6xy24xrvqv0gm08f78ik6y8ki4i0mhl8c5fyx"; depends=[]; }; depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; depmix = derive2 { name="depmix"; version="0.9.15"; sha256="1dnps6s5bfa834akjgx4zbg49danpy54mhiz1kjb4nmrnlb0zq7q"; depends=[MASS]; }; depmixS4 = derive2 { name="depmixS4"; version="1.4-0"; sha256="0v8hvkg7ia7c6a0x7rw5fddm06vv1n0kwjk7g0kj3g18chvpnvw2"; depends=[MASS nlme nnet Rsolnp]; }; - depth = derive2 { name="depth"; version="2.1-1"; sha256="17fxv4a5fbb65p7kmb4iakik5ng6401y7gmknkfr66fmjq65i1sm"; depends=[abind circular rgl]; }; + depth = derive2 { name="depth"; version="2.1-1.1"; sha256="0szy0027nh4ps1z919i740i50app5q7cfyg1fj7pdyl45nbl8k6m"; depends=[abind circular rgl]; }; depth_plot = derive2 { name="depth.plot"; version="0.1"; sha256="0zjg9iyqmcnkvwc9w2j7lmk3k9nsg6n8m6vq5x44d1bp4g2gr6jv"; depends=[mvtnorm]; }; depthTools = derive2 { name="depthTools"; version="0.4"; sha256="1699r0h1ksgrlz9xafw2jnqfsc7xs0yaw97fc6dv3r11x6gxk00y"; depends=[]; }; dequer = derive2 { name="dequer"; version="2.0-1"; sha256="04kzlff8xa733qkkx0gacgig7d4l7yvgqmzva0mj8di12byh214p"; depends=[]; }; @@ -6635,11 +6748,13 @@ in with self; { designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; designGLMM = derive2 { name="designGLMM"; version="0.1.0"; sha256="0ya246mqclkhg8cq6f5mzqn67qks22f3fribyjcvhrx395n0f21v"; depends=[]; }; designmatch = derive2 { name="designmatch"; version="0.3.1"; sha256="0px6iyqik4sfs25yybamvf3ay0vd6r75acj8hin76jl6l7fwk30f"; depends=[lattice MASS Rglpk slam]; }; + designr = derive2 { name="designr"; version="0.1.8"; sha256="04sd4av05rq4cwfx27rg0ig6maq4qiwr1q63wf9x7777q5r9zkg1"; depends=[crossdes dplyr MASS tibble]; }; desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; desplot = derive2 { name="desplot"; version="1.6"; sha256="1vxczs14afsapagvvsvcwi9ar3z74szs0m1g14zqkkkd47h3cij3"; depends=[ggplot2 lattice reshape2]; }; + details = derive2 { name="details"; version="0.1.2"; sha256="03b0wz03mqwna5n3gkcidrcwbagdky43m6pg8wdk6y384r6r1l14"; depends=[clipr desc httr knitr magrittr png withr xml2]; }; detect = derive2 { name="detect"; version="0.4-2"; sha256="03xzv13y2l15afyp00lgvbh51vxg1jaakxjcbnsxzdgb11039x2g"; depends=[Formula Matrix pbapply]; }; - detectRUNS = derive2 { name="detectRUNS"; version="0.9.5"; sha256="0w4pz7waaabgsb47xcmgiz8bzlrs2a83y3v6j7bqb5125y1wn8hw"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; + detectRUNS = derive2 { name="detectRUNS"; version="0.9.6"; sha256="0yl1x0jz66hingbl094picsiyrxzxvnz0grq63rva6nwn7pv1c0b"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; detpack = derive2 { name="detpack"; version="1.1.3"; sha256="1mk2k9akagz7knd4n5p8nxkmnm2mdv9izk4i5yl2v9nv5v39mc4h"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; @@ -6650,9 +6765,9 @@ in with self; { devRate = derive2 { name="devRate"; version="0.1.10"; sha256="0c5hg98w83d02lvb7rbgx8c24li58vpxjy71if337p7cyzzd1lqg"; depends=[]; }; devoid = derive2 { name="devoid"; version="0.1.0"; sha256="1aq7yyfpid3r41c6v5v92im2iq9m3d7gnisc9rkc9zpjfpbpzpx8"; depends=[]; }; devtools = derive2 { name="devtools"; version="2.2.1"; sha256="0i2f549hxkn0j1x1avkhwy68c9r48v9284j7x9cak2q6dfsqz61f"; depends=[callr cli covr crayon desc digest DT ellipsis git2r glue httr jsonlite memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; - dexter = derive2 { name="dexter"; version="1.0.0"; sha256="08w1k6hw9dfw6ppbwcvsxwra85f14bb2v455cnhhqrrp1klkz1n6"; depends=[DBI dplyr Rcpp RcppArmadillo rlang RSQLite tidyr]; }; + dexter = derive2 { name="dexter"; version="1.0.1"; sha256="1b6nlnp9m5lvd7cxrzx246q4n2b3jqqi8a4cask1sskldgq1pnfc"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; dexterMST = derive2 { name="dexterMST"; version="0.1.2"; sha256="1h56dr2z2pzi4zdy3dmyb2vg2jg1v5602c497khkvrbr7qfx8zra"; depends=[crayon DBI dbplyr dexter dplyr fastmatch igraph Rcpp rlang RSQLite tibble tidyr]; }; - dextergui = derive2 { name="dextergui"; version="0.2.0"; sha256="1mz88nydyv469jl26hv2w8xmig45745wx90zqqv8xlr4a7g1xzpy"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; + dextergui = derive2 { name="dextergui"; version="0.2.1"; sha256="1c92j70zihzsqi83rs7hgnp70qgg6y0hdcs3gxin80grsihj1frw"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; dfConn = derive2 { name="dfConn"; version="0.2.1"; sha256="03yl00mqj6r7p2xmrwam2chgqlq4qpfcm85n4b3b41vrm27xg11g"; depends=[data_table doParallel fields foreach ggplot2 gplots gtools nlme Rcpp RcppArmadillo stringr]; }; @@ -6668,7 +6783,7 @@ in with self; { dfpk = derive2 { name="dfpk"; version="3.5.1"; sha256="010rlxj66ar3y61fnm7ys3p6aimlr8ylqq4q4flzr9m88klz8701"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; dggridR = derive2 { name="dggridR"; version="2.0.3"; sha256="1gdwxrl5c5mprfk7rx5mk8davi4mmg1crccxaaipnbnsilg9j9vh"; depends=[dplyr ggplot2 Rcpp rgdal sp]; }; - dglars = derive2 { name="dglars"; version="2.1.2"; sha256="1wp3g23rcrd386hh9xs3yha4fbzxzvlw0gp29ljp6ilf3wzx140k"; depends=[Matrix]; }; + dglars = derive2 { name="dglars"; version="2.1.4"; sha256="1yvw6k0rspaqj42dnnkj828las5v83hqd3db6h94ydcs05n6ym06"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; dgo = derive2 { name="dgo"; version="0.2.15"; sha256="16z3vag1fwsnmynqh0zpwq5qp5ac3xf4787lwqy7asx8qgcc3wmw"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; @@ -6684,7 +6799,7 @@ in with self; { diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; }; dialr = derive2 { name="dialr"; version="0.3.0"; sha256="1wdl3m6mlpxhy75kyzxypf053n2zaf8skk0xq1m4gklq4disbg32"; depends=[dialrjars rJava]; }; dialrjars = derive2 { name="dialrjars"; version="8.10.14"; sha256="0xzgrqgydgrljp3ylqk24hwgj9mcpxsfd4xp3wx8k1d4jmz80gw8"; depends=[rJava]; }; - dials = derive2 { name="dials"; version="0.0.3"; sha256="0ynq6baiyc0iasyhrp1imivha00vy2fndda7gr983p246f38hg82"; depends=[DiceDesign dplyr glue purrr rlang scales tibble withr]; }; + dials = derive2 { name="dials"; version="0.0.4"; sha256="04vz6spp8lw011a9fn8z0bkba9nghgj2hvsxy3n6dqqs3ajd4nfa"; depends=[DiceDesign dplyr glue purrr rlang scales tibble withr]; }; diaplt = derive2 { name="diaplt"; version="1.3.0"; sha256="1kkqhkv3s8rrpqd05jidjdnqmlnb3s9f8rr34rfqj7k4nh0qzzcz"; depends=[]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; diceR = derive2 { name="diceR"; version="0.6.0"; sha256="1jwgngvajnm80g079z4jks5f3y2hy7hz3h9cf7c6wlb8spmaffxr"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen magrittr mclust NMF poLCA progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; }; @@ -6694,11 +6809,13 @@ in with self; { didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.2"; sha256="1i4icdfqvw7imaj1fh392zmzfyz8aqlv9s5naqxm1pm0lqfxl6ca"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; + diem = derive2 { name="diem"; version="1.0"; sha256="09qf47y3mbhkdy7nmy9mcvx371hyss81igc5frbhbp85z2pf5zzb"; depends=[dbscan ggplot2 igraph Matrix Rcpp RcppEigen scales]; }; + dietr = derive2 { name="dietr"; version="1.0"; sha256="0wz7nvhn1c3l36kpmdv4j3ia3wp77qzjlx8rmqv7al0wpmjnxcb6"; depends=[rfishbase]; }; diezeit = derive2 { name="diezeit"; version="0.1-0"; sha256="0rq1k08byvqn99wpql7drnrcxlzcqrcxixh7bczbc8dv1hhsgk9i"; depends=[brew httr jsonlite]; }; difNLR = derive2 { name="difNLR"; version="1.3.0"; sha256="1p3iiaw1wy9ni74y96yp4003406wy1jz773nq919hmrqj0agxkg7"; depends=[CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; difR = derive2 { name="difR"; version="5.0"; sha256="0k0vw5l3pig514ngpvf0rwhwxc316ws352fgw49c3c95ydsz6wd8"; depends=[deltaPlotR lme4 ltm mirt]; }; difconet = derive2 { name="difconet"; version="1.0-4"; sha256="0cjadi4mnpfmy18vyp0dw55mnhs0zddf51w59gvq6gszk145z3bq"; depends=[data_table gplots mvtnorm stringr]; }; - diffEq = derive2 { name="diffEq"; version="1.0-1"; sha256="1xmb19hs0x913g45szmm26xx5xp85v182wqf0lnl4raxaf47yhkm"; depends=[bvpSolve deSolve deTestSet ReacTran rootSolve shape]; }; + diffEnrich = derive2 { name="diffEnrich"; version="0.1.1"; sha256="19bq2frd2h8gh6mdy3pcwd54zzv170c0m1m3wnp5c4gadb9424qf"; depends=[dplyr ggnewscale ggplot2 here reshape2 rlang stringr]; }; diffIRT = derive2 { name="diffIRT"; version="1.5"; sha256="0kip6wz9l9q80qsqwf32pwz7d9vqin6dgfwf0nxlrlzf8xjsxgim"; depends=[statmod]; }; diffMeanVar = derive2 { name="diffMeanVar"; version="0.0.6"; sha256="0zivbd22hp0biy4vnjh21f4djfg5bl9az0wlhn47rk7fw65rgipb"; depends=[Biobase lawstat MASS methylumi missMethyl]; }; diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; @@ -6716,7 +6833,7 @@ in with self; { diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; diffusionMap = derive2 { name="diffusionMap"; version="1.2.0"; sha256="1rvk7069brlm1s9kqj4c31mwwr3mw4hmhay95cjjjfmw5xclff2j"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.4"; sha256="1f3h387kblw1xzdnxphwgfl1n7f6i07kk7kfslvbfxkalbish6ii"; depends=[igraph Rcpp RcppEigen]; }; - digest = derive2 { name="digest"; version="0.6.21"; sha256="0qycqchmv59fb6jp369d82mcx9xgbv70m18qzam0vrs8zkmajb17"; depends=[]; }; + digest = derive2 { name="digest"; version="0.6.23"; sha256="18h5s8vkdcz2vhpsx6g3ig00zalrihr03skn95zw3lr2y56pafmp"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; @@ -6724,9 +6841,10 @@ in with self; { dina = derive2 { name="dina"; version="2.0.0"; sha256="1sq7998xc5qhvd8clc8r32ch7axinh2a2dc7i1w2p148wv130yhd"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; dineq = derive2 { name="dineq"; version="0.1.0"; sha256="1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl"; depends=[boot Hmisc]; }; - dint = derive2 { name="dint"; version="2.1.0"; sha256="1ckrjv0c9vqz7drbkmp5lapkikzgll1jbnh51qn59dc1acc5zhvn"; depends=[]; }; + dint = derive2 { name="dint"; version="2.1.1"; sha256="01j8kah94qlmag2ysdl0p9nj2pqsivkdg1aammq04d8j97pm82yb"; depends=[]; }; + dipsaus = derive2 { name="dipsaus"; version="0.0.3"; sha256="061nvdn3x9bqps5d60zzb41f39h8qy3y3xdfib508zgarbpb67nq"; depends=[base64url cli crayon data_table digest fastmap filelock future future_apply jsonlite qs R6 Rcpp RcppParallel rlang shiny stringr txtq]; }; diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; - directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; }; + directPA = derive2 { name="directPA"; version="1.4"; sha256="0rbdygdslr2gvg4mvnp09lc9rv0sg9jwdf5a5ks50v67n25x6y5d"; depends=[calibrate rgl]; }; directlabels = derive2 { name="directlabels"; version="2018.05.22"; sha256="0xcpc56ssb9430b0xcdhayk3qaak2qcakyss2pz14y5w2027hblv"; depends=[quadprog]; }; directotree = derive2 { name="directotree"; version="1.0.0"; sha256="1yv703mb3fnvjxr2rrxvb8x869hbbjx4l94qbbsmy0ssknayq60y"; depends=[collapsibleTree data_tree]; }; dirichletprocess = derive2 { name="dirichletprocess"; version="0.3.0"; sha256="0hhvmnkx2y5sl308vrx349jr54daifgz4pj5gfykn42gppcpw56v"; depends=[ggplot2 gtools mvtnorm]; }; @@ -6745,9 +6863,10 @@ in with self; { discreteRV = derive2 { name="discreteRV"; version="1.2.2"; sha256="1lhf67cccr96zl3j1sysh2bv0pbgvkbgjdzm35fvrdm7k74ypjsi"; depends=[MASS plyr]; }; discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.5"; sha256="1q4g455jjg293yxdwdppw04ah15idk5j233x2kbqv0jni4v0l2bf"; depends=[igraph Rcpp RcppEigen sparsebnUtils]; }; discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; + discrim = derive2 { name="discrim"; version="0.0.1"; sha256="1g698bimrvzbzzv6mfafwmdyyziscr055zhssnz69j250mh81kyw"; depends=[dials parsnip purrr rlang tibble withr]; }; discrimARTs = derive2 { name="discrimARTs"; version="0.2"; sha256="088v4awic4bhzqcr7nvk2nldf8cm1jqshg2pzjd2l2p1cgwmlxib"; depends=[RUnit]; }; diseasemapping = derive2 { name="diseasemapping"; version="1.4.6"; sha256="16y2w8qjq442qdbqlrg3s2mn53rlcipl22m3q168gda5klm4f7sl"; depends=[sp]; }; - disk_frame = derive2 { name="disk.frame"; version="0.1.1"; sha256="0hp3svp4krx0bssmx7l93fm15lyx1aiml6s0jc6ffcbmc4gyckf1"; depends=[assertthat benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; + disk_frame = derive2 { name="disk.frame"; version="0.2.1"; sha256="1a3q1zwp5aarpb9780g6r0d4vbflf7qfnh2j4v6jkbmzalbd582n"; depends=[assertthat bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.1-4"; sha256="1j4pzbyvn8msi3k2y79nc6pqlrald46168ibznjwrr6rdiqhy4gj"; depends=[raster sp]; }; dispRity = derive2 { name="dispRity"; version="1.3.1"; sha256="0pf6c1byw095q7a6zx0sgwl84a5djkaaq1ly5jpcv0q0l0c9kxxh"; depends=[ade4 ape Claddis geiger geometry geoscale mnormt paleotree phangorn phyclust vegan]; }; @@ -6760,7 +6879,7 @@ in with self; { distTails = derive2 { name="distTails"; version="0.1.2"; sha256="10p7rfqfkhcwq10lhz3cq9i4k1jdccks4y3791lajljsxz5jrca4"; depends=[ercv gsl MASS]; }; distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; }; distances = derive2 { name="distances"; version="0.1.8"; sha256="0mmwks1qzx680izv26x8mcfs4i16mnmf6s9arz1ssx470xwxljxy"; depends=[]; }; - distantia = derive2 { name="distantia"; version="1.0.1"; sha256="0vmq90x2mlbhbgqq37vriwqbh0lr7hgjbbjp5im24qs9xf7jhv90"; depends=[arrangements data_table doParallel fields foreach iterators plyr RColorBrewer viridis]; }; + distantia = derive2 { name="distantia"; version="1.0.2"; sha256="12d6xzhcxs3xxyj82ih6chrr638siy45gna1s22vhnqvjd5jixc6"; depends=[arrangements data_table doParallel fields foreach iterators plyr RColorBrewer viridis]; }; distcomp = derive2 { name="distcomp"; version="1.1"; sha256="1b2rxn7x6sa3kiip1sv8yd556mkjqvq38v3cycb5084x3k6prhp4"; depends=[digest httr jsonlite R6 shiny stringr survival]; }; distcrete = derive2 { name="distcrete"; version="1.0.3"; sha256="0sa6z2mpmk51ig1r7bmpbyv2jd8z6z7mixki2vlq1kybg8cx3wmi"; depends=[]; }; distdichoR = derive2 { name="distdichoR"; version="0.1-1"; sha256="0v19m3n1jgipg65yrv75rm4v27b5aq58cbsmbp7lxvfxmj5ra328"; depends=[boot emmeans nlme sn]; }; @@ -6771,7 +6890,7 @@ in with self; { disto = derive2 { name="disto"; version="0.2.0"; sha256="09pafy8y1ifgglqmal32dy34acx06ypsq2bgwsn6fjiqr9kw401j"; depends=[assertthat broom dplyr factoextra fastcluster fastmatch ggplot2 pbapply proxy tidyr]; }; distory = derive2 { name="distory"; version="1.4.3"; sha256="1mszk8fv1z46d7y1q37mhq9b5yk39w2i9rq6mgdf03afdslrmrip"; depends=[ape]; }; distr = derive2 { name="distr"; version="2.8.0"; sha256="1dyff4m33xmw6hxb3jxzr8vvajg3qz3rfcrfxjxwsswlddfz0zdv"; depends=[MASS sfsmisc startupmsg]; }; - distr6 = derive2 { name="distr6"; version="1.2.0"; sha256="1d68k6b7id5jh39g79lw6l09xml3v5k99nd7wvpilq5j4h2jwk7x"; depends=[checkmate data_table pracma R6 R62S3]; }; + distr6 = derive2 { name="distr6"; version="1.3.1"; sha256="0chv04nsay2kjfxicf9b001wj71rfhxnrbbqj16mab80ilrhv40q"; depends=[checkmate data_table pracma R6 R62S3]; }; distrDoc = derive2 { name="distrDoc"; version="2.8.0"; sha256="1iq2gbfbsf3h279yh3fnqsi39gdw15vc6r1g33xcb8kgmmqmvf0p"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg]; }; distrEllipse = derive2 { name="distrEllipse"; version="2.8.0"; sha256="1ymfa8xpgs8zjp4psiwmll5z0vji496fivxmcavspzxy31cw70wx"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; distrEx = derive2 { name="distrEx"; version="2.8.0"; sha256="1gwhsnlrnzyp2x97d9wfdy5pa9z3q5il934wjv4kxs9wsvkwsr5h"; depends=[distr startupmsg]; }; @@ -6795,6 +6914,7 @@ in with self; { divo = derive2 { name="divo"; version="1.0.0"; sha256="0xy4yxvx2grskdzb5z73mhgrq0nfhdkm2hxahdns7pb1fgajxyjx"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; dixonTest = derive2 { name="dixonTest"; version="1.0.0"; sha256="0nv2qyivr9agr8s2l95jdz3sj21i60asdi5mx1dbn61yqbzv80q6"; depends=[]; }; + diyar = derive2 { name="diyar"; version="0.0.2"; sha256="0gjj6r520dlm034m4361y87lim5h0n904mw2m0avfpkzr54siyx9"; depends=[dplyr lubridate rlang tidyr]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; dkanr = derive2 { name="dkanr"; version="0.1.3"; sha256="1zic7qhwq3s9w70zi1f6qyf7pzm69k5a1p5fd4n3z4nbga54njxd"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; dlbayes = derive2 { name="dlbayes"; version="0.1.0"; sha256="058kkh67npai2ffrjdpjn4pzj8f233znl16nj6yx8wz8lkb17cb0"; depends=[expm GIGrvg glmnet LaplacesDemon MASS]; }; @@ -6802,21 +6922,22 @@ in with self; { dlm = derive2 { name="dlm"; version="1.1-5"; sha256="1aksm66sfa7ipl5xgs4j5giac7q2m744wjl40mva56xn6i674h4r"; depends=[]; }; dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; }; dlnm = derive2 { name="dlnm"; version="2.3.9"; sha256="0vbrp9x7n94wjrigw124i3i7szy0bsh4sdggi8nsizn2ccsv5pnq"; depends=[mgcv nlme tsModel]; }; - dlookr = derive2 { name="dlookr"; version="0.3.11"; sha256="0a0ar7alfngv0fmbklv7jvlsbjk3sbvmssapjvng22w4swcnk2py"; depends=[classInt corrplot DMwR dplyr ggplot2 gridExtra kableExtra knitr magrittr mice moments prettydoc purrr RcmdrMisc RColorBrewer rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; - dlsem = derive2 { name="dlsem"; version="2.4.3"; sha256="1x5l63a1789lbim91msw0g98yrw86s0pavws0bf5cpvj23la8i9h"; depends=[graph Rgraphviz]; }; - dlstats = derive2 { name="dlstats"; version="0.1.0"; sha256="0s92rdpw3m534wgjaic4srsp9i1pa3ibfmr4h7p3ly51zhza6l5h"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; + dlookr = derive2 { name="dlookr"; version="0.3.12"; sha256="1963b9cjfs56jazvizfj2yj7vkzav6z87z3ii1wbdpk33d76bxmy"; depends=[classInt corrplot DMwR dplyr ggplot2 gridExtra kableExtra knitr magrittr mice moments prettydoc purrr RcmdrMisc RColorBrewer rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; + dlsem = derive2 { name="dlsem"; version="2.4.5"; sha256="0ywcssjzkdqxlmjbsqdcgl9kivih5zw865556lnxx3zqnfygxzlv"; depends=[graph Rgraphviz]; }; + dlstats = derive2 { name="dlstats"; version="0.1.3"; sha256="0inij1rzw8i683lyzvnjhfzrng7zx727y9wcijv6ny2fw64cdd6n"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; dma = derive2 { name="dma"; version="1.4-0"; sha256="003snr09hazszwqnvjrbv8vyz6ihgcfcfhrlshg451dddn920615"; depends=[MASS]; }; + dmacs = derive2 { name="dmacs"; version="0.1.0"; sha256="1prw6h8sj6fcpajg6xwqhi8v5jfl74mbjdjrdy524miw56fh9h0r"; depends=[lavaan MplusAutomation]; }; dmai = derive2 { name="dmai"; version="0.4.0"; sha256="0ma89jl0l598sffpikvjj40f2djjcnjq29k6y1bav4dm2g51qgmq"; depends=[dplyr ggplot2 magrittr stringr tibble tidyr]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; dmm = derive2 { name="dmm"; version="2.1-5"; sha256="1i94bsgc12ysivpy9mdmzcdfki1f84x036danki7ynrbym2b3c7a"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; - dnet = derive2 { name="dnet"; version="1.1.4"; sha256="0xccb50a85d9fcxfg0shxf430hzgjyh4qgb3js4sgzi02iagim58"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; + dnet = derive2 { name="dnet"; version="1.1.5"; sha256="0gw3r4sg0893gjkh54k1gyy3x5wqnv5lxhj8ds1p98c9v7j94z78"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.4"; sha256="0hzaa308pppq2cqpb067f3y3nyv1p2xdmgy3dykf90psnn5v011p"; depends=[arm ergm glmnet igraph network sna]; }; - do = derive2 { name="do"; version="1.0.0.0"; sha256="1r7c4n4821b27czyqy7162wwbnwg6ps74diwd4s8zyilxjs782gn"; depends=[plyr reshape2]; }; - doBy = derive2 { name="doBy"; version="4.6-2"; sha256="02vbv9nfgywg6lsiialkmfnax5z3rkyb9nr8j9l2cp8xi6ml95mb"; depends=[dplyr magrittr MASS Matrix plyr]; }; - doFuture = derive2 { name="doFuture"; version="0.8.1"; sha256="1akjzzqsa768y6d4ligr4mrcb107g5jwcl0rm34hbnqm81qms0bz"; depends=[foreach future globals iterators]; }; + do = derive2 { name="do"; version="1.1.0.0"; sha256="1v80vq8rc8ywajgi08xxkpcbhi800qjix5fyqi12ynq83wqmn93x"; depends=[data_table plyr]; }; + doBy = derive2 { name="doBy"; version="4.6-3"; sha256="1d0d6pwai1g4i5jls0jm9va29ci5hy92n5957608f3fzi1jwy635"; depends=[broom Deriv dplyr magrittr MASS Matrix pbkrtest plyr tibble]; }; + doFuture = derive2 { name="doFuture"; version="0.8.2"; sha256="0p69gh3adwhinpxry380wccwiq85zr2h49chxz1qwacavvafcvv8"; depends=[foreach future globals iterators]; }; doMC = derive2 { name="doMC"; version="1.3.6"; sha256="1cn9gxavhvjswip8pwvkpi7q6wpzdllcsdjabga8akf55nggqxr9"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.15"; sha256="0vnqbha3gig3awbfvsfx3ni5jir398md1n7xmsb8jihnjsk7xbbi"; depends=[foreach iterators]; }; @@ -6826,6 +6947,7 @@ in with self; { dobin = derive2 { name="dobin"; version="1.0.0"; sha256="023s1gq9wqsaf9390nxqclpwwmxfpyv0sxxb8nnck7lpsl5g1pkl"; depends=[FNN pracma]; }; dobson = derive2 { name="dobson"; version="0.4"; sha256="0xfn7s3wzrv1md40bdjrnjfiqyxg5c6lrcpnvayjdgrhxq161hhq"; depends=[]; }; dockerfiler = derive2 { name="dockerfiler"; version="0.1.3"; sha256="128648s9lj96p3nlxwy4gs108w5kjcg6w48nfx3r52gb8w2z7948"; depends=[attempt glue R6]; }; + docknitr = derive2 { name="docknitr"; version="0.4.0"; sha256="1gc2dvji07fzmippnnk6m8v7wra4cprfayqa6skymnp14nf14h00"; depends=[knitr]; }; docopt = derive2 { name="docopt"; version="0.6.1"; sha256="06zknnd0c5s2y0hbddzdlr3m63ib783izpck6pgz7sjbab5pd068"; depends=[]; }; docopulae = derive2 { name="docopulae"; version="0.4.0"; sha256="186mfiy4ygx6spnv7yrm5h0k6nf2g1xhk1l05iij39j5al5d9j21"; depends=[]; }; docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; @@ -6835,11 +6957,13 @@ in with self; { documenter = derive2 { name="documenter"; version="0.1.1"; sha256="0y6zrvmb9bhc1ni4v89h9pq5ara8p2v4b35ylasia5s9x1y93mcp"; depends=[htmltools magrittr officer xml2 yaml]; }; docxtools = derive2 { name="docxtools"; version="0.2.1"; sha256="09fcamrr3yw1zrj4bx8ra9yidprk1h44p48by85zjqwd1ly4gqbf"; depends=[dplyr ggplot2 lubridate purrr rlang stringr tidyr]; }; docxtractr = derive2 { name="docxtractr"; version="0.6.1"; sha256="03bcaiwxxybbdxh26rp4bl66aiv4hxmgn21w6dxm383xha03iqfw"; depends=[dplyr httr magrittr purrr xml2]; }; - doex = derive2 { name="doex"; version="1.1"; sha256="1md7l1kr7i258kycxlpsar6aq5vll6qjqyabjgi14f2hp5p8b6ah"; depends=[]; }; + dodgr = derive2 { name="dodgr"; version="0.2.5"; sha256="0n4jh7rdj4qxmi1wns3ida8pa7rlvz6lrjl0n9ba18w3mgg1z483"; depends=[callr digest igraph magrittr osmdata Rcpp RcppParallel]; }; + doex = derive2 { name="doex"; version="1.2"; sha256="1r999z30ipa04pgck0hfalqxihb1bj8sdhlkkhf4plb7maaz3qm3"; depends=[]; }; dominanceanalysis = derive2 { name="dominanceanalysis"; version="1.2.0"; sha256="04x0l37lbdjflz2jr5h95hd9a3c858p7j1p2mscyn08c986j04mb"; depends=[]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; + donut = derive2 { name="donut"; version="1.0.0"; sha256="1m10kcdcr9ma4zmc1gj3lyza8zxvnn57wvxznaappaba4a5b47v2"; depends=[]; }; doremi = derive2 { name="doremi"; version="0.1.1"; sha256="1h36sj60l5sd5ybbdyrv0wkr9p18j7iwg111khq0znb71xi5nzp7"; depends=[data_table ggplot2 lme4 lmerTest zoo]; }; - dosearch = derive2 { name="dosearch"; version="1.0.2"; sha256="090k7fbla5xsczbbz7qglnbnngi1gdhjis4yy6bccw9v9s4mfg9s"; depends=[Rcpp]; }; + dosearch = derive2 { name="dosearch"; version="1.0.4"; sha256="1hq85jym0plf8hj77bfd623nhyjgfqqzm1w92n3lii3j5lv9vrwg"; depends=[Rcpp]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; dotCall64 = derive2 { name="dotCall64"; version="1.0-0"; sha256="1b8p7m3w0m7bp977c6jz74xkd611cxg11j49yza59k5fp338scb9"; depends=[]; }; @@ -6850,6 +6974,7 @@ in with self; { double_truncation = derive2 { name="double.truncation"; version="1.4"; sha256="190fwl119ycmiszkq0mqc6dh8adwqx7b0ipmhz71qvqdzgh9gjm9"; depends=[]; }; downloader = derive2 { name="downloader"; version="0.4"; sha256="1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"; depends=[digest]; }; downscale = derive2 { name="downscale"; version="3.0-1"; sha256="0kmv4d5fa6mmhmbfqfxzk1gv55j15d7madsdqi8470bwh0kkya4y"; depends=[cubature minpack_lm raster Rmpfr sp]; }; + downscaledl = derive2 { name="downscaledl"; version="1.0"; sha256="0lqxngzpxj65b48j5w0n8dg6fp4lgg5zpgxc2wj6d9wh5f97l71b"; depends=[dplyr keras magrittr raster Rcpp RcppArmadillo rgdal rstack sp tensorflow]; }; downsize = derive2 { name="downsize"; version="0.2.2"; sha256="18b9shd79z0bsdnp0apqqwv6c73j4wnfiv41ywqz761nmxbldxbn"; depends=[magrittr R_utils]; }; dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; }; dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; }; @@ -6861,18 +6986,17 @@ in with self; { dplyr = derive2 { name="dplyr"; version="0.8.3"; sha256="032c89wa04g9rih9shyvwl3il0bsrv3xk489x6867sk9bb3amd38"; depends=[assertthat BH glue magrittr pkgconfig plogr R6 Rcpp rlang tibble tidyselect]; }; dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.3.2"; sha256="1pq630hlvpfrhaxqn6yh0kgapgibrnbic78g130d40visak60j1p"; depends=[bit64 DBI dbplyr dplyr odbc rstudioapi]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; - dpmixsim = derive2 { name="dpmixsim"; version="0.0-9"; sha256="064i122j8vkpjxzfrhp25kb6nv5j3a7s8qk0202x7vnvj9caqjvx"; depends=[cluster oro_nifti]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; }; dqrng = derive2 { name="dqrng"; version="0.2.1"; sha256="0rp8q5zijlvaqmpnkwr314w9w40sj4fz7sqsdgsffcfvn42w2jg1"; depends=[BH Rcpp sitmo]; }; dqshiny = derive2 { name="dqshiny"; version="0.0.3"; sha256="1fra6fbv8if7wwr8vi3261rdzv4kj99y841lb9xiv1mh72r3mx58"; depends=[htmltools shiny]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; - dr4pl = derive2 { name="dr4pl"; version="1.1.8"; sha256="13ic6lmk2cdh6pvjfpkcnv41mgr27amay2g501ag5ppl4b95lc2q"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; + dr4pl = derive2 { name="dr4pl"; version="1.1.11"; sha256="0vv3h4sxw38grhr70s28sxkca20adnqdmpp8qqwlbr3dw950yaa3"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; }; - dragon = derive2 { name="dragon"; version="0.2.0"; sha256="16jf6b0zkps9z5z8nsgfgny2jp3fbbwihd2v20w41b0lb3swj757"; depends=[broom colorspace colourpicker cowplot DT igraph magrittr RColorBrewer shiny shinyBS shinydashboard shinythemes shinyWidgets tidyverse visNetwork]; }; + dragon = derive2 { name="dragon"; version="0.2.1"; sha256="1y2dav9151zdcqw1maxhh3s4c1syk5rs8yb8grx8xkffvg5123w7"; depends=[broom colorspace colourpicker cowplot DT igraph magrittr RColorBrewer shiny shinyBS shinydashboard shinythemes shinyWidgets tidyverse visNetwork]; }; dragonking = derive2 { name="dragonking"; version="0.1.0"; sha256="01b01wd1s2b8sa9f0kfbf2pbzhaqra7xxskigqh3vlj389xqm1id"; depends=[]; }; dragulaR = derive2 { name="dragulaR"; version="0.3.1"; sha256="1cw5v7m1b4pxsizsjb3zdzhydxj577p6q5fcjklsvpzmiixzlyav"; depends=[htmlwidgets shiny shinyjs]; }; - drake = derive2 { name="drake"; version="7.6.2"; sha256="1hkvb7hs2yh4vwm76lzkyi9kxmvjrmrwf08gykkvypc6xa9vnvvf"; depends=[base64url digest igraph rlang storr txtq]; }; + drake = derive2 { name="drake"; version="7.8.0"; sha256="0s9dv0013vknpcagrd1makzpzmkf8ag5b2zja4vw3d4895cpx6vd"; depends=[base64url digest igraph rlang storr txtq]; }; drat = derive2 { name="drat"; version="0.1.5"; sha256="0i80c4hyclwnq8g8amvdid9pwr11mwbscwydaxmvbrbhv3qzjg6d"; depends=[]; }; draw = derive2 { name="draw"; version="1.0.0"; sha256="0kbz8rcgygl4fhmljzaan5jl7wjvfljcaykm7q9lw9s6m78p06gz"; depends=[]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; @@ -6885,7 +7009,7 @@ in with self; { droptest = derive2 { name="droptest"; version="0.1.3"; sha256="1wlfhj6c4pb5mcybyd2bcn55y3azk7dv7d7il97qwbhl8kf59csl"; depends=[data_table]; }; drsmooth = derive2 { name="drsmooth"; version="1.9.0"; sha256="1wgi961bvbsnq4bygxbpy4sy5fy34lrrkaaj0r2rxcahwa1sc38n"; depends=[boot car DTK lubridate mgcv multcomp pgirmess segmented]; }; drtmle = derive2 { name="drtmle"; version="1.0.4"; sha256="0k8cps3kpfrlv33a0czjp327qzdj69lwbpv4k5q7qjcv0878yypg"; depends=[doFuture future future_apply future_batchtools np plyr SuperLearner]; }; - drugCombo = derive2 { name="drugCombo"; version="1.1.0"; sha256="0y8zjcbaympczrvr4dfbd1n83iliv5qv4xz9za4zm412c1dkdd24"; depends=[BIGL Deriv ggplot2 minpack_lm nlme rgl]; }; + drugCombo = derive2 { name="drugCombo"; version="1.1.1"; sha256="0f4akxmj5jd89jm7kzkmqksxmb6fqj7jawvm3hpw6limyry3mp4z"; depends=[BIGL Deriv ggplot2 minpack_lm nlme rgl]; }; drumr = derive2 { name="drumr"; version="0.1.0"; sha256="09xi3sf424bpq10fq25j209dylfbi1lfd911r44ffadkxzvp5p1s"; depends=[audio stringr]; }; ds = derive2 { name="ds"; version="4.0"; sha256="1iic5fb27cnhsa83zg28hydrhzc01i9z0711xvk95c3gv7mbfp2p"; depends=[]; }; ds4psy = derive2 { name="ds4psy"; version="0.1.0"; sha256="15knnl0ld8vnb3mv06p7425h7w5y5m598k4dny8svqwranhs856a"; depends=[cowplot ggplot2 here readr stringr tibble tidyr tidyverse unikn]; }; @@ -6902,27 +7026,29 @@ in with self; { dst = derive2 { name="dst"; version="1.4.0"; sha256="0zr04m33ky98y5n6jbczcfn898i7y8zc1hygfm8p9rrnw93d2lin"; depends=[]; }; dstat = derive2 { name="dstat"; version="1.0.4"; sha256="023jp0xdbg200ww1gnr3fzgjqd82acag0jps7q6j6m27q11psvgz"; depends=[]; }; dtables = derive2 { name="dtables"; version="0.2.0"; sha256="0ikgip3p4b7q97b2dshlx0fq09xsk304gfk5prw4rk95w9wck3qs"; depends=[psych]; }; - dtangle = derive2 { name="dtangle"; version="0.3.1"; sha256="0kvds49gx850rmrcja0xr3j9nja5zqnsg1q2zjb07qp425jc3j46"; depends=[]; }; - dti = derive2 { name="dti"; version="1.4.2"; sha256="0f4ck215p3i1dnl0hzjzrx1llgjd67zyabzwmbj0s5my4byj8xiz"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; + dtangle = derive2 { name="dtangle"; version="2.0.9"; sha256="0yg1fbrqixqp93vdw3grvz1la5l2kidgs730qp6yihkp3260cxf3"; depends=[DEoptimR]; }; + dti = derive2 { name="dti"; version="1.4.3.1"; sha256="147s8aj65jyrz9qwiwjpa3ly1nsv201z5r7xmg03fj2vlx93k44k"; depends=[adimpro awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; dtp = derive2 { name="dtp"; version="0.1.0"; sha256="0qy8nrbq22bfbajkxq6blkq7583pc5mb392gmqb3c9daxmqn42vb"; depends=[Formula gtools plyr]; }; dtpcrm = derive2 { name="dtpcrm"; version="0.1.1"; sha256="0k25fm0z3snpx1v2kwd50svgnkjhn5c0hy1gnlw2lif6rjz1fzd9"; depends=[dfcrm diagram]; }; - dtplyr = derive2 { name="dtplyr"; version="0.0.3"; sha256="04yawjzyij0hlarifb9w4bnxybf73crwidvd5nwclscbis22a29r"; depends=[data_table dplyr lazyeval rlang]; }; + dtplyr = derive2 { name="dtplyr"; version="1.0.0"; sha256="115b08fc3rpj101i0j5gx2z3w80ylgampzvb674jhx2jxf4kl9c7"; depends=[crayon data_table dplyr rlang tibble tidyselect]; }; dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dttr2 = derive2 { name="dttr2"; version="0.0.1"; sha256="042zll9hw4ljwr85x4dmkv8nz6r0mpawaa5s58ngxypshss8sbg0"; depends=[checkr hms]; }; dtw = derive2 { name="dtw"; version="1.21-3"; sha256="02hyhx1sy5h3vzh9zixy18a7d47df4k5d0wyflcvlcbsbcl6p90s"; depends=[proxy]; }; dtwSat = derive2 { name="dtwSat"; version="0.2.5"; sha256="0qvjzqmi6plkq5l4r52c7wil58n41l5f5dxzpk9r4yis8bdm5zlq"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer Rdpack reshape2 rgdal scales snow sp xtable zoo]; }; dtwclust = derive2 { name="dtwclust"; version="5.5.5"; sha256="1jmbcmkw7kvd0vr8rlnqyi5i8kgnlxm5rwbgjzl8cv2d3v67rm18"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel RcppThread reshape2 RSpectra shiny shinyjs]; }; - duawranglr = derive2 { name="duawranglr"; version="0.6.3"; sha256="0swvrdwnbyigsvds3s32nw79b245q3cgv7xskjx7qjcpnvzr7x7q"; depends=[digest dplyr haven readr readxl]; }; + duawranglr = derive2 { name="duawranglr"; version="0.6.5"; sha256="04w8ll6p8m0ljcp96sfp028afgxddk4wyncfdwiywi0ps34zh084"; depends=[digest dplyr haven readr readxl]; }; dub = derive2 { name="dub"; version="0.2.0"; sha256="066lzyk44380mf17vx4db4a3a4rs7zl85mj5hjg172khjbqnbixw"; depends=[]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; dunn_test = derive2 { name="dunn.test"; version="1.3.5"; sha256="0lqwvyl3pyygfc73nf81gzw3zl3w43r7ki0yw2dgrzhkpb2iji4a"; depends=[]; }; dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; + dupree = derive2 { name="dupree"; version="0.2.0"; sha256="12dlqmvk2zlxh283xjf2d6x12cy6r3rsy88y5g40h9002m7i2jqy"; depends=[dplyr lintr magrittr purrr rlang stringdist tibble]; }; durmod = derive2 { name="durmod"; version="1.1-2"; sha256="1mp97x8px4s53m91m5vnkixgz087wgd4bas64xdbki6y53zimzjj"; depends=[data_table mvtnorm nloptr numDeriv Rcpp]; }; dvmisc = derive2 { name="dvmisc"; version="1.1.3"; sha256="0x391pxg5mqgp5xxc8qwhwxky8ds7d9gr9iwmsb12c92kxfk00bv"; depends=[cubature data_table dplyr ggplot2 MASS mvtnorm pracma purrr rbenchmark Rcpp survey]; }; dwapi = derive2 { name="dwapi"; version="0.1.3.1"; sha256="1sz4n8vn7cmlilxzhkm4rdfca0904cbh28n5383p9pr46bdi69q5"; depends=[httr jsonlite readr rjson xml2]; }; + dwdradar = derive2 { name="dwdradar"; version="0.2.0"; sha256="06wa3m77931lv47530hyczwdjrrfdmgczmbhwy0z9fzhn8kz0ipp"; depends=[]; }; dwlm = derive2 { name="dwlm"; version="0.1.0"; sha256="0n5dil9qvyy4gish3wnv8bzq0ci1p0dr2vmbbadl29jl7rd1v0rc"; depends=[]; }; dyads = derive2 { name="dyads"; version="1.1.2"; sha256="014gphxkn0wkdq5zgd71vv9dmzyswgpari59w5mf2070c0rr56n5"; depends=[MASS mvtnorm]; }; dydea = derive2 { name="dydea"; version="0.1.0"; sha256="15alr3f6wkkpjd5wmcjazi58yc8gwcqr662mjwlfg15r94fzqrlg"; depends=[Chaos01]; }; @@ -6933,10 +7059,10 @@ in with self; { dynOmics = derive2 { name="dynOmics"; version="1.2"; sha256="0fsck5wx4rcfckjr6xg0s3a6cvh4881cqzy0af91icqg0p3zjj2l"; depends=[ggplot2 gplots]; }; dynRB = derive2 { name="dynRB"; version="0.15"; sha256="0fa6g4aj2cncg6mi0yc2yn6321qi7fz9d9cvqrnxhcnbbghdyzq9"; depends=[corrplot dplyr foreign ggplot2 RColorBrewer reshape2 vegan]; }; dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; }; - dynamac = derive2 { name="dynamac"; version="0.1.9"; sha256="09lbhs1k5n9l57ml7wzrp63rzx4j79vb86jqfdd8zpf1jl512ffh"; depends=[lmtest MASS]; }; + dynamac = derive2 { name="dynamac"; version="0.1.10"; sha256="10qz2wx39rb7d1z0drzxm4m30bg9hvi3bjr9m10z3hdkzsg1ybvw"; depends=[lmtest MASS]; }; dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; - dynamichazard = derive2 { name="dynamichazard"; version="0.6.5"; sha256="1f12c89p5b6yfhha5gzacf82bjgmvri5xnhhpwcqrxa3mli4d1hb"; depends=[boot nloptr Rcpp RcppArmadillo survival]; }; + dynamichazard = derive2 { name="dynamichazard"; version="0.6.6"; sha256="1ad4ymi28yx6vh3x8p4pm4ph81fb9fkhk4zfhbl60522d4kjbsjq"; depends=[boot Rcpp RcppArmadillo survival]; }; dynamo = derive2 { name="dynamo"; version="1.0"; sha256="0arsv686ix7xpca57ayqgifim1q35dl4w2mx7fw8bc0lidapilyp"; depends=[abind glamlasso MortalitySmooth Rcpp RcppArmadillo]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; dyncomp = derive2 { name="dyncomp"; version="0.0.2-1"; sha256="13wp2k8nbgrbrqng2dmgy0ixgidk51wq9y7mv5pdbvdajxdsyh11"; depends=[zoo]; }; @@ -6949,28 +7075,28 @@ in with self; { dynparam = derive2 { name="dynparam"; version="1.0.0"; sha256="0rzkksb0j7vybz4mk9c4sm3zcxdjll1bqx54cbal8a0iq259rigp"; depends=[assertthat carrier dplyr dynutils Hmisc magrittr purrr stringr testthat tibble tidyr]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; dynprog = derive2 { name="dynprog"; version="0.1.0"; sha256="1rvn2zyhdi60y01zbvfv4him6iz2ljdr7ivkr7m7y7yd1lg547ax"; depends=[rlang]; }; - dynr = derive2 { name="dynr"; version="0.1.14-85"; sha256="0b0fyiyqr2hhzglr6l7k4qfxz2pq3wkq1xcmmsyjyyxj1zj4d5a6"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; + dynr = derive2 { name="dynr"; version="0.1.15-1"; sha256="1vd93mckc8q8wvs3sgly7j1vn1i2qis6pcyqiag6nqz5xjfv6rn4"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; dynsbm = derive2 { name="dynsbm"; version="0.6"; sha256="0sdy42ihymhzx577jc2qr7lwirc9lviz3sagfy09zhbwizz5a4kw"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.3-7"; sha256="0ar8n84fpfy68cx321syg8hvjxjnh00mw0a9sid9dw58f956phf8"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; dynutils = derive2 { name="dynutils"; version="1.0.4"; sha256="1rzwcfbv5aqa08fy9i1fiz4a7v3z2skyyjz392rjsbwpnlk77ryh"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; - e1071 = derive2 { name="e1071"; version="1.7-2"; sha256="0lipj692rjjw8rrhqh2k9i5dh8y2sjrw9q53rwm32irhx2f2j73j"; depends=[class]; }; + dynwrap = derive2 { name="dynwrap"; version="1.1.4"; sha256="11c8rd9yv54a7g1ypdniw4vchcpa3lbijnh67srp6fymrlf82z7d"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils FNN glue hdf5r igraph jsonlite magrittr Matrix processx purrr readr reshape2 stringr testthat tibble tidyr yaml]; }; + e1071 = derive2 { name="e1071"; version="1.7-3"; sha256="0pf2pjb590z0jikgv1037xcp7dq06mg3dzmyffjw6gk7dd9blbdv"; depends=[class]; }; eAnalytics = derive2 { name="eAnalytics"; version="0.1.4"; sha256="15hhd4q2yxzq3a3awvk81ixa43hk519ym8ap7v1ahghyr0njnyyf"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard shinytest shinyWidgets]; }; eChem = derive2 { name="eChem"; version="1.0.0"; sha256="0wmf204hqd4s5har5l9bkcbrbmbqbb8m11w2aivi2gs98f3hy51p"; depends=[animation plot3D]; }; eDMA = derive2 { name="eDMA"; version="1.5-3"; sha256="0wyp81si6lcispqng4c7lii22qbyblvijgnlxvcsnkcxj5hpm76j"; depends=[Rcpp RcppArmadillo xts zoo]; }; eGST = derive2 { name="eGST"; version="1.0.0"; sha256="0qi4vg0pwy55js9ww1cw85ssim3x7s2p98cjijxvlrvid8sns5bq"; depends=[MASS matrixStats mvtnorm purrr]; }; - eHOF = derive2 { name="eHOF"; version="1.8"; sha256="0g0sb98mlgvhs27s0a1x0ysj3r4p3r7i382fqzfv29kn1ayw0r5c"; depends=[lattice mgcv]; }; eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; }; eNetXplorer = derive2 { name="eNetXplorer"; version="1.1.0"; sha256="1n84rf9axvvjf6s0mamf5z889hg3y32mhypasmxc455698z3d1k5"; depends=[calibrate expm glmnet gplots Matrix progress RColorBrewer survcomp survival survivalROC]; }; - ePCR = derive2 { name="ePCR"; version="0.9.9-9"; sha256="0ix7rvh9w4zcp7k0m5bm16wdjs6yr7wvnsc9mssfrwcjx0p57nlx"; depends=[Bolstad2 glmnet hamlet impute pracma survival timeROC]; }; + ePCR = derive2 { name="ePCR"; version="0.9.9-11"; sha256="0bkvjvygdnzcc23sslgkcrx11mzwgsqss37lwnbr7rq0jp1sw46s"; depends=[Bolstad2 glmnet hamlet impute pracma survival timeROC]; }; eRTG3D = derive2 { name="eRTG3D"; version="0.6.2"; sha256="04m39jkp4lvv145wmcswc87qx36wpfkm95kq9fik8a3jb5myvjll"; depends=[CircStats ggplot2 gridExtra pbapply plotly plyr raster rasterVis sp tiff]; }; eRm = derive2 { name="eRm"; version="1.0-0"; sha256="11p8j61arq1ih2qi33wf0442vcdbp3zvknzm5aknsifwl4mbzzly"; depends=[lattice MASS Matrix]; }; - eSDM = derive2 { name="eSDM"; version="0.3.0"; sha256="15slr528qbf4nhmwlcbj96gsjhmf8y3pc7dzicy6x5xc5c7r6ywf"; depends=[colorRamps colourpicker dichromat dplyr DT leaflet lwgeom purrr raster RColorBrewer rlang ROCR sf shiny shinycssloaders shinydashboard shinyjs tmap units viridis zip]; }; + eSDM = derive2 { name="eSDM"; version="0.3.1"; sha256="1q0482n7p4880brjnrfg4xzqz7wz4g6v4rdgg3ljnhidipszkp2d"; depends=[colorRamps colourpicker dichromat dplyr DT leaflet lwgeom purrr raster RColorBrewer rlang ROCR sf shiny shinycssloaders shinydashboard shinyjs tmap units viridis zip]; }; eaf = derive2 { name="eaf"; version="1.8"; sha256="1plzvfa2vs3njky7xk9dvic2xapdnzb5iycrksv0qj03ylbh6410"; depends=[modeltools]; }; earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; }; earlygating = derive2 { name="earlygating"; version="1.0"; sha256="0y6xjkh9p8bvanc9p5sycah8v81k85xr8i7vyvjb9g4a64srwhd7"; depends=[betareg doParallel foreach]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; - earth = derive2 { name="earth"; version="5.1.1"; sha256="0dz2jl0jw9sbz5ym92hfzx3pzf234wbfkjp6i7d5cgrjfpaa5xil"; depends=[Formula plotmo TeachingDemos]; }; + earth = derive2 { name="earth"; version="5.1.2"; sha256="13a8qfv94bqnjkacnr0nz1g8yd99cnyz4k2qslyclrckqbl9hvrj"; depends=[Formula plotmo TeachingDemos]; }; earthtide = derive2 { name="earthtide"; version="0.0.9"; sha256="14i1ihswvspqlis9h9m4xfjmhqwz1nj6blhdzqanvd05abw6qnkx"; depends=[BH R6 Rcpp RcppArmadillo RcppParallel]; }; earthtones = derive2 { name="earthtones"; version="0.1.1"; sha256="17biiw0ig8i8ihc2f8csp0bqryygg27ic2v1vrf81ax3qzhngy4l"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; @@ -6988,6 +7114,7 @@ in with self; { easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; + easyr = derive2 { name="easyr"; version="0.1-1"; sha256="0ha64fl9kvnnc4i9bwg7bv065w2v1y7lcdgsyp7s6ik2lpfc73rx"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang stringr tibble XML]; }; easyreg = derive2 { name="easyreg"; version="4.0"; sha256="1w4wlhziyhdyldm0zgnm73fnxrh0fv8hwcw5j8ircxb4npx7bcgg"; depends=[nlme]; }; ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; @@ -6997,6 +7124,7 @@ in with self; { ebimetagenomics = derive2 { name="ebimetagenomics"; version="0.6"; sha256="0jaz7l71pnf3i2q83mx0pjqli9sn30a4b9vshcmp70v3h6xdj9wx"; depends=[breakaway sads vegan]; }; ebirdst = derive2 { name="ebirdst"; version="0.1.0"; sha256="1bj4jb2cg08z58p9ih9c9f3jfy8xxm4rz99hdm29282dy37xn7dz"; depends=[car data_table dplyr fasterize gbm ggplot2 gridExtra mgcv PresenceAbsence rappdirs raster rgdal scales sf stringr tidyr viridisLite xml2]; }; ebmc = derive2 { name="ebmc"; version="1.0.0"; sha256="0v9hkzy8ljddmi6wdjd1jga4ib566ikr1vgrvxba67ka524r6bbp"; depends=[C50 DMwR e1071 pROC randomForest rpart]; }; + ebreg = derive2 { name="ebreg"; version="0.1.0"; sha256="033ldzj9r9y14nq5bsy1ds9vys8imk1ysii8b889zd1bi319b05y"; depends=[lars Rdpack]; }; ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; }; ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; @@ -7016,7 +7144,7 @@ in with self; { ecolottery = derive2 { name="ecolottery"; version="1.0.0"; sha256="0w5aq1aaqzz74vlj8hgnmn60l8rdrchx022dpspqnpvpzdlh65z5"; depends=[abc ggplot2]; }; econet = derive2 { name="econet"; version="0.1.81"; sha256="0hm1v4fjzyzdaxiw6lar7fxnqsckis3n7nrsravhbllhcf0aqq7w"; depends=[bbmle dplyr igraph intergraph MASS Matrix minpack_lm plyr sna spatstat_utils tnet]; }; econetwork = derive2 { name="econetwork"; version="0.2"; sha256="0ilqxyvpkiwhhgml19f1rf08bn061nf76d7fby3084ypgc4iwi1b"; depends=[igraph Matrix_utils rdiversity]; }; - economiccomplexity = derive2 { name="economiccomplexity"; version="0.2.2"; sha256="0hlrpj6mzcvkb7vv4rk32aq7c3782rkd294f59lsbzvfsjzlrz4b"; depends=[dplyr igraph magrittr Matrix rlang tibble tidyr]; }; + economiccomplexity = derive2 { name="economiccomplexity"; version="0.3"; sha256="058cyzr01jrgi9090wn8vpjhf074bq7g76vfbyk58jic0k78k634"; depends=[dplyr igraph magrittr Matrix rlang tibble tidyr]; }; econullnetr = derive2 { name="econullnetr"; version="0.1.0.1"; sha256="1ssgvz17a2cpwag786rc6azi3cz74cc4bxz5jjrn1bfq8ch8xqd3"; depends=[bipartite gtools reshape2]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.2"; sha256="1yzyqvhshgc7ip251y7hsvip4xwf8i92bvvz84mn0mzv5b4mq3im"; depends=[]; }; ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; }; @@ -7026,10 +7154,11 @@ in with self; { ecotox = derive2 { name="ecotox"; version="1.4.0"; sha256="1x048njvlq7mp0fpx2nal8znhnkw5cnq2z0rmvknm2m66lfhds7a"; depends=[ggplot2 tibble]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; ecoval = derive2 { name="ecoval"; version="1.2.5"; sha256="0rlgi8cd7jdybb2dqx6ndp8rg02bvsvhksmh8vk8g5fg2wk0rll3"; depends=[jpeg rivernet utility]; }; - ecp = derive2 { name="ecp"; version="3.1.1"; sha256="0s0286ky1imhhs89bp1ylx8wvii55v7wzg1g49l03az64971kayj"; depends=[Rcpp]; }; + ecp = derive2 { name="ecp"; version="3.1.2"; sha256="11f9p869xr0zg779i46gmflxlq4xclk9wxbab0nj2fan26pn4sfy"; depends=[Rcpp]; }; ecr = derive2 { name="ecr"; version="2.1.0"; sha256="0vvkdxlcqaim9mkgwgdxrx1xhw3lshi1nxfw3kqllq14p3l6xss4"; depends=[BBmisc checkmate ggplot2 parallelMap ParamHelpers reshape2 smoof]; }; ectotemp = derive2 { name="ectotemp"; version="0.1.2"; sha256="0dy6n2gaz6qgfj2gvavlgl4ic15wq1lb9ykynihi77nyxnz67i46"; depends=[dplyr psych]; }; ed50 = derive2 { name="ed50"; version="0.1.1"; sha256="058p1750ba5hp4rczi26grgwjia2ny1880v1vfp6wxad13r459pq"; depends=[boot]; }; + ed50simulation = derive2 { name="ed50simulation"; version="0.1.1"; sha256="00fknpssrpin8bpjhf2lsjx3lbpinrmqa6jzmgy3nslkc51x0939"; depends=[boot]; }; eda4treeR = derive2 { name="eda4treeR"; version="0.2.0"; sha256="0fh6nfgvbkvjm1f0b292ggi0mr8ylq5pg2wp8cph46j8rhbgbdxz"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; }; edarf = derive2 { name="edarf"; version="1.1.1"; sha256="0f27hs7vn4v2jis3d66s48hr0ki8m8ndspcw1cwns5vjwb77iqwm"; depends=[data_table ggplot2 mmpf]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; @@ -7037,7 +7166,6 @@ in with self; { eddi = derive2 { name="eddi"; version="0.0.1"; sha256="19cgrqdcji509igb6rmlwb75xyyvrh34nv6zyjjfcsc31p5nvf95"; depends=[raster rgdal]; }; edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; }; edeaR = derive2 { name="edeaR"; version="0.8.3"; sha256="18v85mzs5gys3x4vj9dh941xxbfajlp6zly2q7pf842hs33fipbi"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue hms lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr zoo]; }; - edesign = derive2 { name="edesign"; version="1.0-13"; sha256="0fc3arr8x9x9kshp6jq4m4izzc5hqyn5vl0ys6x0ph92fc6mybp3"; depends=[]; }; edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; edfReader = derive2 { name="edfReader"; version="1.2.1"; sha256="076far4fhd6rpa6fwffad4cgchjvar135yblvlrm33s9pd5bf0hn"; depends=[]; }; edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; @@ -7051,7 +7179,7 @@ in with self; { edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.2"; sha256="105jv2sz10xbl881lkhgmxzgmb8629mqsminhd197khrkf9nv40i"; depends=[lasso2 MASS mvtnorm rgl]; }; edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; educineq = derive2 { name="educineq"; version="0.1.0"; sha256="0qd6kvcy280glv3q6lcrawmnsfvp90as95chgi3hav0yj2dpakn6"; depends=[flexsurv ineq]; }; - eechidna = derive2 { name="eechidna"; version="1.3.0"; sha256="1hh6qmdsq700q16g7fjvk6gq8z3kd4562ch5pvlb0zqgjx52jskf"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tidyr]; }; + eechidna = derive2 { name="eechidna"; version="1.4.0"; sha256="07537brbdinkrmygbd2galyl6acbcbg2pkjafkdhxdgklpxv7j9m"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tibble tidyr tidyselect]; }; eefAnalytics = derive2 { name="eefAnalytics"; version="1.0.6"; sha256="07wpz8zlgkbzkhmv569w7rnz3i830391arrh17sg2gc4fx9h1559"; depends=[geoR lme4 metafor mvtnorm]; }; eegkit = derive2 { name="eegkit"; version="1.0-4"; sha256="1r1lack4ps9hwqq56rq37431rcxf3x79zgvda6vrmh4s0ziy6v4x"; depends=[bigsplines eegkitdata ica rgl signal]; }; eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; @@ -7059,9 +7187,10 @@ in with self; { eemR = derive2 { name="eemR"; version="1.0.1"; sha256="1w3nwlrbxm7z4c3acx991zk5drgs67qys7kgl0qakh5vrdsrxw3v"; depends=[assertthat dplyr pracma purrr R_matlab rlist stringr viridis]; }; eeptools = derive2 { name="eeptools"; version="1.2.2"; sha256="1sc9km926pnl6dhk7ir2zx4693bki10zrq09v07k177wq7xlphw9"; depends=[arm data_table ggplot2 maptools vcd]; }; eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; - effectFusion = derive2 { name="effectFusion"; version="1.1.1"; sha256="1z3m1wadl5qs37mbj335xghinji9qx9njrd9ckvz63xh1sgpz89i"; depends=[bayesm cluster ggplot2 GreedyEPL gridExtra MASS Matrix mcclust]; }; + effectFusion = derive2 { name="effectFusion"; version="1.1.2"; sha256="0m392wrkmgvys7a2bk2w1swfkjikkllng8sy8wb8s2j9y6c3wanp"; depends=[bayesm cluster ggplot2 GreedyEPL gridExtra MASS Matrix mcclust]; }; effectR = derive2 { name="effectR"; version="1.0.2"; sha256="1icr1sx98x3h8rbky1agdh809arhjqcypyajl7y50yis8a5pkycb"; depends=[ggplot2 reshape2 rmarkdown seqinr shiny viridis]; }; - effects = derive2 { name="effects"; version="4.1-2"; sha256="08v77w52ds5v20vj6brqfri714mr8i65jffsqaa4brkg4li4bjqi"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; + effects = derive2 { name="effects"; version="4.1-4"; sha256="1jbpyji7qn5hz8a6afsfbng0nx0a7w0v3v51wpmnbipfjchyalhy"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; + effectsize = derive2 { name="effectsize"; version="0.0.1"; sha256="07vgmxdl75798hgdh90zysafjh97rmmj2wjjyr6xff4fbhi8rlkb"; depends=[bayestestR insight parameters]; }; effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.7.6"; sha256="129vs8kp10h6yhrrmn77518120bmfr55l6nkpbxkvylnr641b5a2"; depends=[]; }; @@ -7072,12 +7201,15 @@ in with self; { egg = derive2 { name="egg"; version="0.4.5"; sha256="1fy7srpiavfn8kyrr1m84an7acgwi6ydzrg71m3b0vk7y9ybmj0m"; depends=[ggplot2 gridExtra gtable]; }; eggCounts = derive2 { name="eggCounts"; version="2.2-1"; sha256="01lbinwc91pyynhny3lpdh0gb8fffk4dq8a99ps0mbsk8aa5735j"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders]; }; egoTERGM = derive2 { name="egoTERGM"; version="2.1.1"; sha256="1zp3kr7s43rjp45qbd6lv48mbmby5rrz1vdz9s64v43rjm8v2jyz"; depends=[boot btergm ergm GGally Matrix network sna speedglm xergm_common]; }; + egor = derive2 { name="egor"; version="0.19.10"; sha256="0s9s15j1v5z2v8jhfz8zrmfl43hmn7rw1afs1wjw1kvzz41k1jlm"; depends=[dplyr igraph network plyr purrr rlang shiny survey tibble tidygraph tidyr]; }; eha = derive2 { name="eha"; version="2.7.6"; sha256="01q75bn3r06zwbfa6p69whdkilqx53ysxa3cz2d50jvd79bqlf4h"; depends=[survival]; }; + ehaGoF = derive2 { name="ehaGoF"; version="0.1.0"; sha256="1qrx9rmf4ifasxycnzj06xn3gl0gp9w1vplb4wrghiziqw5cqird"; depends=[]; }; + ehelp = derive2 { name="ehelp"; version="1.1"; sha256="0zxa6aq75w4k4pkk47wmdird2r8jvqvkbbzhilmv0f7z36lrr894"; depends=[]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; eiCompare = derive2 { name="eiCompare"; version="2.1"; sha256="0kv4k1zk1gz3fapy2i2ydy0n38hy95i10r3hr3dx8mkkf3nsj46h"; depends=[cubature data_table ei eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils stringr tidyr tmvtnorm ucminf]; }; eiPack = derive2 { name="eiPack"; version="0.1-9"; sha256="1rivccqfr5hz80xgfw652993zg0pw7yd0by52hyp7bwm89gsjksq"; depends=[coda MASS msm]; }; eiPartialID = derive2 { name="eiPartialID"; version="0.1.2"; sha256="0721p89llzjznz2b6zlf54v7fy9lb9c5qb7w8q0l582iy5cwaw35"; depends=[eco MASS sandwich]; }; - eia = derive2 { name="eia"; version="0.3.3"; sha256="0yl09g4gbcig6c1hkd4qb2vnnf77inc02mb6c96h5mjykazbn8s5"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr tibble]; }; + eia = derive2 { name="eia"; version="0.3.4"; sha256="1yjrgmf6s9c35wpgpg66gi0wmfynm3kbcyaknsw44blpkd35c6yq"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr readxl tibble]; }; eigeninv = derive2 { name="eigeninv"; version="2011.8-1"; sha256="18dh29js824d7mrvmq3a33gl05fyldzvgi8mmmr477573iy9r30g"; depends=[]; }; eigenmodel = derive2 { name="eigenmodel"; version="1.11"; sha256="1l3n0z736xf3x6cyxzmmq1jb2glxi2b75z7v39y4471knh6nbb4d"; depends=[]; }; eigenprcomp = derive2 { name="eigenprcomp"; version="1.0"; sha256="156qyv7sl8nng55n3ay6dnpayyfrqv27ndz40xf4w92is9zmymy0"; depends=[]; }; @@ -7085,7 +7217,7 @@ in with self; { eive = derive2 { name="eive"; version="2.3"; sha256="073hwx944db7zxq6yib6yvciaic11k49zl1iqphippcd5ygkad80"; depends=[Rcpp]; }; eivtools = derive2 { name="eivtools"; version="0.1-8"; sha256="0ynmrql6dv10m7cwba5mzwlbvp6ab53nzqqvk3ihwyiqzmnnmpk4"; depends=[R2jags]; }; eiwild = derive2 { name="eiwild"; version="0.6.7"; sha256="1fp4kvlmcjjnzn2a5cmlzaf6y5q6cdbbi2nmvjyqc4y1bmwh3srf"; depends=[coda gtools lattice]; }; - eixport = derive2 { name="eixport"; version="0.3.6"; sha256="0wzp7jxs80drp428m6kgx419vzrmiw6spgv9ldrakbfkjjnrzsa6"; depends=[cptcity ncdf4 raster sf sp]; }; + eixport = derive2 { name="eixport"; version="0.4.0"; sha256="06knza8mm7d8i1h72axq3s9id1cdrrq0gjc6lc3q65hf5hx89k1q"; depends=[cptcity ncdf4 raster sf sfheaders silicate sp tidyr]; }; elasso = derive2 { name="elasso"; version="1.1"; sha256="0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2"; depends=[glmnet SiZer]; }; elastic = derive2 { name="elastic"; version="1.0.0"; sha256="1mq2ayq4dwb1y0dkp3v30qs6vh2d5q4brcifjrvq7wifh4r6gnpk"; depends=[crul curl jsonlite R6]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; @@ -7101,6 +7233,7 @@ in with self; { elementR = derive2 { name="elementR"; version="1.3.6"; sha256="12gg2x6xzms2ni80qdm04bfajg55ff6zkki0y2cz47kq70wzfkmg"; depends=[abind colourpicker devtools EnvStats gdata gnumeric httpuv lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; elevatr = derive2 { name="elevatr"; version="0.2.0"; sha256="0721w28pb07ndw24k4zssh5r90fd4mf33yxigricnz23z29ql120"; depends=[httr jsonlite progress raster sf sp]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; + elfDistr = derive2 { name="elfDistr"; version="1.0.0"; sha256="11h91mwiw2pr0c8zvyzqql275falpiajv784n2rd5xs9azprqdd0"; depends=[Rcpp]; }; elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; }; elitism = derive2 { name="elitism"; version="1.0.4"; sha256="0n5g1nd1dd5wc76qa2va1lyxahg9p062l8wdqzq43ah6943pjzgr"; depends=[MASS]; }; elliplot = derive2 { name="elliplot"; version="1.2.0"; sha256="186i4gr8k9bifzssblln8z6wxfmnplls3kc4m2liiz86mzsnim9r"; depends=[]; }; @@ -7109,20 +7242,20 @@ in with self; { elliptic = derive2 { name="elliptic"; version="1.4-0"; sha256="1dhba0yfxjd5rlqsxp5a7s2hclfkla9wigsr39dlma67l6qjjmxn"; depends=[MASS]; }; elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.1"; sha256="1n71b5pqd1szhmp4q1h9aqgkx7s54f5i3xk5nljwzsn7cyih1kb3"; depends=[KernelKnn Rcpp RcppArmadillo]; }; elo = derive2 { name="elo"; version="2.0.0"; sha256="0cryr1cgvs5z54piw6yrv9fd7nrqv1kwxw5ahx46k7qxdgr5bb2s"; depends=[pROC Rcpp]; }; - elrm = derive2 { name="elrm"; version="1.2.4"; sha256="11xcny3kxjcqyp37v7pcnmsinz9b8n13xlng7649r4p0vdkjf774"; depends=[coda]; }; emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; }; emax_glm = derive2 { name="emax.glm"; version="0.1.2"; sha256="04di6bp97cxjbbszakb64y15bjmnd2j8zvxdj8gdbgmhxk9wmbwd"; depends=[AER MASS pander pracma pROC]; }; + emba = derive2 { name="emba"; version="0.1.1"; sha256="0sgh97jzfxna4dww8xmj1qy5435d4lm2yar2ra6nf416snlppjxv"; depends=[Ckmeans_1d_dp igraph magrittr rje usefun visNetwork]; }; embed = derive2 { name="embed"; version="0.0.4"; sha256="02rwifkpghwymsqnkn43p2gylnlxk2a3bqmssh7amd3d6rpl3wl8"; depends=[dplyr generics keras lme4 purrr recipes rlang rstanarm tensorflow tibble tidyr uwot withr]; }; embryogrowth = derive2 { name="embryogrowth"; version="7.6"; sha256="0bsg904jikb1dqichkinpgm0difg17sfczw6q4zab6r02s7yb53s"; depends=[deSolve HelpersMG numDeriv optimx]; }; emdbook = derive2 { name="emdbook"; version="1.3.11"; sha256="0a515jdzvg87npvrh7md7zp0v5nlz7c2jr7pba5dql6slb0d8j7q"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="1.1.5"; sha256="06v982rw8sz22w624hr68vdgxmfmi5na11ywsg6qr77jvgbprgz4"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; + emdi = derive2 { name="emdi"; version="1.1.6"; sha256="1zxbbn0rl2z7zksh1k8wznry4k1bs08ipla1kaxyadj3i2wdk2y3"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.7"; sha256="1d4l9kcji6ba137f1qqjl763q2fd6bxryxsarc3iwi3mfi2b580m"; depends=[]; }; emhawkes = derive2 { name="emhawkes"; version="0.9.0"; sha256="1h6map6w66q91s6g1qr9wfk589cbvva1banqrxzzf29g7ihl15vh"; depends=[maxLik]; }; - emld = derive2 { name="emld"; version="0.2.0"; sha256="08kncxrc4yj32wcl6h1sszrajfi41m87sivc94py40c9bxpmnmmf"; depends=[jsonld jsonlite xml2 yaml]; }; + emld = derive2 { name="emld"; version="0.3.0"; sha256="16f1za636bbdp9y5mq40n2v77l2zbmwrph870wm12rmn7cjl9bwq"; depends=[jsonld jsonlite xml2 yaml]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.4.1"; sha256="1fpawaxnmj67md169a9mzrnnh2d0c973xydfg6hw865933jil9lq"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.4.3.01"; sha256="16v5j31516nbqnj2zhgqvyp5yxd4zcs5zi0aspa5plr2qikvrkmg"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; emojifont = derive2 { name="emojifont"; version="0.5.2"; sha256="0s1as6i5dz2rbd1aashn99fji2iksjzrkdkfi7wqnnxxpmkha3yx"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; @@ -7133,7 +7266,7 @@ in with self; { emplik2 = derive2 { name="emplik2"; version="1.21"; sha256="1980bwc4fc4rwzlwya030n5rv8rq0s82hnw955mvaxrbmicnqlla"; depends=[]; }; ems = derive2 { name="ems"; version="1.2.7"; sha256="1l4javnfhlb6y40dpdvri2795yj0s9zqf8bi02s5llx5lcq3bxbd"; depends=[]; }; emstreeR = derive2 { name="emstreeR"; version="2.2.0"; sha256="1qbv61j2ya6zvyp8494xi8dhjlb58jmqil9cm5z0pr7p2sr6l32r"; depends=[BBmisc BH ggplot2 Rcpp RcppArmadillo RcppMLPACK scatterplot3d]; }; - emuR = derive2 { name="emuR"; version="2.0.3"; sha256="1js04f9id5v3mf1kqwffrxag6949grma088cvzir4fp356izz8zs"; depends=[base64enc compare DBI dplyr git2r httpuv jsonlite MASS mime purrr RCurl readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid wrassp]; }; + emuR = derive2 { name="emuR"; version="2.0.4"; sha256="152lg7sf98a7qrblz1ryjdpsprk2arfzwlq8z7b4ilr771lq0plw"; depends=[base64enc compare DBI dplyr git2r httpuv jsonlite MASS mime purrr RCurl readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-20"; sha256="11z25iqyzck0s4hw0i86i9jsi52w9bjxx3zdpafssyfqfk7z5avw"; depends=[mvtnorm]; }; enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; }; enc = derive2 { name="enc"; version="0.2.1"; sha256="0lx159hj464i9libaa3qy96avdwq220333h7pbdh94xz6jrn7k73"; depends=[]; }; @@ -7151,7 +7284,7 @@ in with self; { enpls = derive2 { name="enpls"; version="6.1"; sha256="12088v9xnj5b3dlakqz1hbzxz4mdai7xi7s2fpx8lj3y3lx7znmb"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="2.1"; sha256="0ymhzs9d2wl0s9rvbqc1hqb78mlzwhlc7mmijpfqkm5r720pf6m1"; depends=[httr rjson]; }; enrichvs = derive2 { name="enrichvs"; version="0.0.5"; sha256="0x91s03hz1yprddm6mqi75bm45ki3yapfrxmap7d4qc0hi06h22k"; depends=[]; }; - enrichwith = derive2 { name="enrichwith"; version="0.2"; sha256="063q4jbs6054djk6qf3105p7na4kndvr549w5c4fiz8264r8bnvv"; depends=[]; }; + enrichwith = derive2 { name="enrichwith"; version="0.3"; sha256="0nc8cdzz9x39kl821qpqg4b0rcs3a1vs75wivlcxcq5zlmdlpb9x"; depends=[]; }; ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.2"; sha256="16d8030zfdwifqrh45vz3gf5n0bix0mhsmsnydgjq1fghdklcmyx"; depends=[chron ensembleBMA evd]; }; ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; @@ -7160,24 +7293,27 @@ in with self; { ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; entropart = derive2 { name="entropart"; version="1.6-1"; sha256="0cc40xf2lf2vxxnamn26fkrch9lmpbqm4am743yq7bmprfbn4cc4"; depends=[ade4 ape EntropyEstimation geiger ggplot2 ggpubr reshape2 vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; + entrymodels = derive2 { name="entrymodels"; version="0.1.0"; sha256="0clyv5ws5nnnyys596zbmdndds43xrvnnkbdk59kj3wscw0hq982"; depends=[dplyr magrittr readr]; }; envDocument = derive2 { name="envDocument"; version="2.4.1"; sha256="074m7adnasvys28kjdgj9071fi90vsl4yv5zvpxik4crlx098dlw"; depends=[]; }; envalysis = derive2 { name="envalysis"; version="0.3.3"; sha256="1ys93g5gxr9x1v4hg98dcpwa40n5xkh1j8drrmpnmxwq6gv01r6r"; depends=[drc ggplot2]; }; - enveomics_R = derive2 { name="enveomics.R"; version="1.4.4"; sha256="06pj5mla76w90mrzqlv7szcs7psaxhl6y0w0v0w6f8nlxx06nm3v"; depends=[fitdistrplus investr sn]; }; + enveomics_R = derive2 { name="enveomics.R"; version="1.7.0"; sha256="0nk356svi25lzw5iza0jmg6krxhizilm7ja3sgym65319jpcflbp"; depends=[fitdistrplus investr sn]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.5.7"; sha256="00hydrvawm2zx6d8dcfd5p5l01lvrk5hsfq8k67b2iysjn2sh531"; depends=[animation BiocParallel broom crosstalk data_table dplyr DT genefilter ggplot2 ggraph ggridges igraph iterators itertools mixtools plotly rcdk RColorBrewer reshape2 rmarkdown shiny shinythemes]; }; enviPat = derive2 { name="enviPat"; version="2.4"; sha256="1gvb7jmwwh4l44b50xmrq3bysr2iv6442yh9pdk6n81g3bgpz1d0"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; - envirem = derive2 { name="envirem"; version="2.0"; sha256="150sqyc4k3cq12dl4ivbc4w0gmqfrkxj80mfk4ak4f5zp770k30a"; depends=[huxtable palinsol raster RSAGA sp]; }; + envirem = derive2 { name="envirem"; version="2.1"; sha256="175190l81r24v6ygr759l4qwi4i3v6n57jmgswamr01px4pvhxag"; depends=[huxtable palinsol raster RSAGA sp]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; envnames = derive2 { name="envnames"; version="0.4.0"; sha256="12mfbcksrp733jycasaiavlsmx138xmjpywly1wha4ds6bfw93hr"; depends=[]; }; - eoffice = derive2 { name="eoffice"; version="0.1.7"; sha256="0jz18650zr6y1maz4lj4xlc5w8v87mgjkk92yqn4pyfv6x1i5y8n"; depends=[broom devEMF dplyr flextable ggplot2 ggplotify gplots htmlwidgets magick magrittr officer plotly R_devices rvg tibble]; }; + envoutliers = derive2 { name="envoutliers"; version="1.0.0"; sha256="1wkd6xpsw5n9jx0qq5p88h6j8vkcyiyajd3zb6im5bc4d73nmi07"; depends=[car changepoint ecp ismev lokern MASS robustbase]; }; + eoR = derive2 { name="eoR"; version="0.4.0"; sha256="0vn4s4af94n9h6x7z14qwpz94rgsd5m3mv55wva7x3h99ryhm83s"; depends=[data_table]; }; + eoffice = derive2 { name="eoffice"; version="0.1.8"; sha256="03yjw8yy3x81hnisiznx2gch4flhp7b9vafavx2r8ny86mqya1k9"; depends=[broom devEMF dplyr flextable ggplot2 ggplotify gplots htmlwidgets magick magrittr officer plotly R_devices rvg tibble]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.3.2"; sha256="0j64riiy7b2v1m8ki6d43jm61s7yjwlx4kxxdvlz3fx1xw7qf522"; depends=[]; }; epanetReader = derive2 { name="epanetReader"; version="0.7.3"; sha256="05pwa6z03qsjwr9pxpbxycsd21p7mf5j5ajyg4yaas5g100s1k8c"; depends=[]; }; - eph = derive2 { name="eph"; version="0.1.1"; sha256="1j555gqyvk8zmiqijm50zxr7isgn8adinj9545s4qjzz2s6n52l8"; depends=[assertthat dplyr expss glue janitor magrittr purrr questionr readr readxl stringr tidyr]; }; + eph = derive2 { name="eph"; version="0.2.0"; sha256="0j41hmiw59q9mwzsw94s0m0hrh4fqhbmayqbblfizh7gr7wijz53"; depends=[assertthat attempt curl dplyr expss glue janitor magrittr purrr questionr readr readxl stringr tibble tidyr tidyverse zoo]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; epiGWAS = derive2 { name="epiGWAS"; version="1.0.2"; sha256="0jqblfmz02za3b2pgi15379bzgh98yv5kyv8kh0lkzhrmpgph2zj"; depends=[DescTools glmnet matrixStats SNPknock]; }; - epiR = derive2 { name="epiR"; version="1.0-4"; sha256="0qdcav8dix8bgp5cp54g288sccqinrv1zj1wp49rgnzcy4n6a0c2"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="1.0-10"; sha256="1y1ki5dynzs58m1wgzsydbhpi8lmfbb9h4sma064mwyw6mih0q7g"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.5"; sha256="0ivr51x37cbdryli9b4p4iq9v2c90zwmywrwdmg7ryq5vprvvbp0"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.3.0"; sha256="1b00k086wiwhhrlh4348wqqza1v0whakwy5h7q95rmgxz7lppiim"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; @@ -7188,21 +7324,21 @@ in with self; { episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; episensr = derive2 { name="episensr"; version="0.9.4"; sha256="1cjfmj9alf46mpfzx7jfh6yrn7i4ldpnks28zxk42ln1zhb6jh6f"; depends=[actuar boot ggplot2 gridExtra magrittr plyr reshape trapezoid triangle]; }; episheet = derive2 { name="episheet"; version="0.4.0"; sha256="0y3wy91hr3b9iky5k81mf897wg2gcdv05afhndjqwcfb0xkn2f9q"; depends=[assertthat dplyr ggplot2 magrittr rlang tidyr]; }; - episode = derive2 { name="episode"; version="1.0.0"; sha256="1djk36jkvr8xvhfddqg6xsmhxc3yrgivkm8g2hr4n1qixsk1ad8m"; depends=[glmnet Matrix nnls Rcpp RcppArmadillo]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.2"; sha256="0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc"; depends=[kableExtra knitr MASS survival xml2]; }; epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; }; epitrix = derive2 { name="epitrix"; version="0.2.2"; sha256="1rqpvdky002h6mz636b77l4kd0im16pww62l6vnwh83si1m9pkki"; depends=[distcrete sodium stringi]; }; - eplusr = derive2 { name="eplusr"; version="0.10.3"; sha256="1mmzqbn1zhc742cqblmwpc4k94r0zqmzwyxi5sv5d11dfj5mszzd"; depends=[callr cli crayon data_table later lubridate processx progress R6 RSQLite stringi units]; }; + eplusr = derive2 { name="eplusr"; version="0.10.4"; sha256="1ls3ixsmkqw4wbxbym8hdxkwqr273ji5krafq4mnw51ksn5f25b5"; depends=[callr cli crayon data_table later lubridate processx progress R6 RSQLite stringi units]; }; eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.6-1.1"; sha256="1qlj4cl7mh5k52v2ippfs3cish5iadnix5w46p25hjqiriksclna"; depends=[elasticnet irr lassoshooting Matrix survival]; }; epos = derive2 { name="epos"; version="0.1.0"; sha256="0b9r552hbrs281z7pxxw1hxgv9d15qmyzvgk5xsrgh8wivkh4lwp"; depends=[dplyr ggplot2 gridExtra hashmap stringr testthat tidyr TopKLists xtable]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epsiwal = derive2 { name="epsiwal"; version="0.1.0"; sha256="0lmcmiqcc1pjj1d0zyn0hc23if1lkm85p6vcjqbddpnv9ags2mbh"; depends=[]; }; - epubr = derive2 { name="epubr"; version="0.6.0"; sha256="0zzra5vpfsw62c19yah7fwm8xlrwnrlsb34d46wd1ssays6arf01"; depends=[dplyr magrittr tidyr xml2 xslt]; }; + epubr = derive2 { name="epubr"; version="0.6.1"; sha256="0rp9q6hriilps5h6nc1226w5dvzws1g78pg3ldrq2r4dakpvsmjj"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; epxToR = derive2 { name="epxToR"; version="0.4-0"; sha256="1vw9czdxp80jpvcc8bj5m4fshlavlawc1735m0s0d0x14z3giy6g"; depends=[httr XML]; }; - eq5d = derive2 { name="eq5d"; version="0.3.0"; sha256="1a2x3zmil76vkvp47iynxhbixsywv4a5i1vxmnqyqigv5v03bqnf"; depends=[]; }; + eq5d = derive2 { name="eq5d"; version="0.4.0"; sha256="1zjdhxcq2slb31kf6sqjbzcrihkaxn37g4yf8lwcnffzaykz4kpg"; depends=[]; }; + eqn2svg = derive2 { name="eqn2svg"; version="0.1.0"; sha256="01hqmhjy62ic28jsx8zn0zg87pipxmd82795pj66661qkq306lb0"; depends=[htmltools magrittr]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; equSA = derive2 { name="equSA"; version="1.2.1"; sha256="0gbv7jvjivnril3cmvknzmqlmpb4mv0rhqwk1i87wqxsvrgplik1"; depends=[bnlearn doParallel foreach huge igraph mvtnorm ncvreg SIS speedglm survival XMRF ZIM]; }; @@ -7216,7 +7352,7 @@ in with self; { equivalenceTest = derive2 { name="equivalenceTest"; version="0.0.1.1"; sha256="1lr1qc4mv8f9hwqidj1rwhxqm1fb8cf1hnb1k32xpdqwzsxbfa47"; depends=[cubature polynom Rdpack rootSolve]; }; erah = derive2 { name="erah"; version="1.1.0"; sha256="1jp75z9y97v0dr656qqcf3npsijk91x5f2lyiwjy54yrzlf5bxp5"; depends=[igraph ncdf4 nnls quantreg Rcpp signal XML]; }; erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; - ercv = derive2 { name="ercv"; version="1.0.0"; sha256="1h0v0gscf1ks1shkdvkn1g8r8x5jsb66a4m7rnpdfwbp2ijh41gp"; depends=[]; }; + ercv = derive2 { name="ercv"; version="1.0.1"; sha256="0rs4yhm9sjnqkrgqqy6b8wj9fgk910hxc8d7zi4qwql0v1gid27l"; depends=[]; }; erer = derive2 { name="erer"; version="2.5"; sha256="0wgzd7r63d20vghmbilqn1p5033i5p31asya1gzwlipgyfxmqp0b"; depends=[lmtest systemfit tseries urca]; }; ergMargins = derive2 { name="ergMargins"; version="0.1.0"; sha256="0f65150ahlxx75k72f2shmlryq5qbszl9p0qxxpl87sfpclsaa0x"; depends=[btergm ergm Matrix network numDeriv statnet xergm_common]; }; ergm = derive2 { name="ergm"; version="3.10.4"; sha256="08hzhc06sfchbq8kq5yvs7gxz0v6nvx0qdb2g6ac38n54cd0npw8"; depends=[coda dplyr lpSolve MASS Matrix network purrr rlang robustbase statnet_common tibble trust]; }; @@ -7245,9 +7381,9 @@ in with self; { esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; esmprep = derive2 { name="esmprep"; version="0.2.0"; sha256="076sm26mkkvig2g04k32z2dlp2h9gnqgzckhirl4pqm01siknl61"; depends=[lubridate]; }; esquisse = derive2 { name="esquisse"; version="0.2.2"; sha256="1k18lrg5417s1mjm01m6nn81w959naybdqj74zrr8gbphlk8s4xx"; depends=[ggplot2 ggthemes hrbrthemes htmltools jsonlite miniUI RColorBrewer rlang rstudioapi scales shiny shinyWidgets stringi]; }; - esreg = derive2 { name="esreg"; version="0.4.0"; sha256="1qfidbmdrm4vy72yjnpaadhm993xv6qqy44a8hk0l4isvmg51a5i"; depends=[Formula quantreg Rcpp RcppArmadillo]; }; + esreg = derive2 { name="esreg"; version="0.5.0"; sha256="1njwqm3hrcxwl6y7gwa4zq0q5139293qk503ahw23dxwzdsiy2z5"; depends=[Formula quantreg Rcpp RcppArmadillo]; }; essHist = derive2 { name="essHist"; version="1.2.2"; sha256="0rvlxfcl42h4pjqf37mx7bc4k21iwvnys6l5rf2jsl7yk1b9hmbn"; depends=[Rcpp]; }; - essurvey = derive2 { name="essurvey"; version="1.0.2"; sha256="0r1hkdksidx974pi08hg25qlzfxazqmzamwqg2njks2r9xk299p8"; depends=[haven httr rvest stringr xml2]; }; + essurvey = derive2 { name="essurvey"; version="1.0.4"; sha256="0y7acy5k3whz2xq3gyqds13n8yb8i8r1a34s9pjzsy6s3gw5rys3"; depends=[haven httr rvest tibble xml2]; }; estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; }; estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; }; estimatr = derive2 { name="estimatr"; version="0.20.0"; sha256="0mrx14chg9qb90hlivn90l1jv9la4n1bkznbdx58ghli73k8dvdz"; depends=[Formula generics Rcpp RcppEigen rlang]; }; @@ -7259,16 +7395,17 @@ in with self; { etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; ether = derive2 { name="ether"; version="0.1.5"; sha256="03skydbw4ch0lhhlm57qgg4q0vyd4rwzsq3v2w40jrczpxpdsn9q"; depends=[dplyr httr jsonlite Rmpfr]; }; - ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.5"; sha256="08h7wym5vnbmqws17bzs27zj7c2rzz5l37rvhj0y71m4s1pz1fkc"; depends=[assertthat circlize cowplot dplyr ggplot2 magrittr reshape]; }; + ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.6"; sha256="1v1vsj1nzmgji6kzgfkdmy08ajn8iag4jzw0lwh81b3vmdx8f4g2"; depends=[circlize cowplot dplyr ggplot2 magrittr reshape]; }; etl = derive2 { name="etl"; version="0.3.7"; sha256="045hkh95ki3s10l9mz4710ws2i9and4rqb0qk1c5sfslglc0riq5"; depends=[DBI downloader dplyr lubridate readr rlang rvest stringr tibble xml2]; }; etm = derive2 { name="etm"; version="1.0.5"; sha256="1yivbq8y0ijcl1m4nir4q9hp4pi6iphwxgjprygsdf7vp98wq677"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; + eudract = derive2 { name="eudract"; version="0.9.0"; sha256="0idxccm3cqb34gjypbh635rlqvjgcwbmywp1cv41mz2g56kbrcnb"; depends=[dplyr magrittr tidyr xml2 xslt]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; eulerr = derive2 { name="eulerr"; version="6.0.0"; sha256="0pvyg91xamhmz4k1b18g96imkddk64d6dadg74v1mnbzjiq742wh"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; europepmc = derive2 { name="europepmc"; version="0.3"; sha256="1ngqs1sqzkbwv98dd5z4cxj8bnz41wyd0g060a2vpqi3s99s4i2h"; depends=[dplyr httr jsonlite plyr progress purrr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; - eurostat = derive2 { name="eurostat"; version="3.3.5"; sha256="0gsycqcpvc0042iv8pa0bg64fmkkw9gzxw81f4gndpl50q8iq68y"; depends=[broom classInt countrycode dplyr httr jsonlite RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr]; }; + eurostat = derive2 { name="eurostat"; version="3.3.55"; sha256="1i66m6hamrq54209vcmp1y13lwfx1bykm1fggrv54nyxijikbjs7"; depends=[broom classInt countrycode dplyr httr jsonlite RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr]; }; ev_trawl = derive2 { name="ev.trawl"; version="0.1.0"; sha256="14yhnhqq1gz2rfy13v1dybnf55pyyimajbarxyp7gaqnd66nfq3p"; depends=[eva evir fExtremes ghyp hypergeo testthat]; }; eva = derive2 { name="eva"; version="0.2.5"; sha256="03hyzbqi2mgdrmzrjnwzvy0ndf7ha5959b63sgd1g0b998fibbmd"; depends=[EnvStats Matrix]; }; evaluate = derive2 { name="evaluate"; version="0.14"; sha256="0a2y7j534gbgixkwj9r1z76l2vssw4g1hznzbpclc076wkdqpj58"; depends=[]; }; @@ -7295,13 +7432,14 @@ in with self; { evtree = derive2 { name="evtree"; version="1.0-8"; sha256="1dmzbsyrg8wwzzqcxzqmgm7yai37lh9lkjhizhr2h0k03s5xdv1k"; depends=[partykit]; }; ewoc = derive2 { name="ewoc"; version="0.2.0"; sha256="0kanx14fhcbqz6gpyj7628vgy9fwz3ji5mkd4107b8pgpz2hkg00"; depends=[coda doParallel foreach Formula ggplot2 rjags]; }; exCon = derive2 { name="exCon"; version="0.2.5"; sha256="0gqnv01dw4ncf3x3p74pc6f14a1ixq7icl2p18hsmvxdqqg7kgy7"; depends=[jsonlite]; }; - exact2x2 = derive2 { name="exact2x2"; version="1.6.3"; sha256="11ayh6j6jj4p4bns3s2c2nmnigdzr6hpwjp4b2i7qw67kd321agn"; depends=[exactci ssanv]; }; + exPrior = derive2 { name="exPrior"; version="1.0.1"; sha256="05z7dx1qfwcagadlw8wrf30071ssawv8njm2q6jaa4r4in0i5l1s"; depends=[coda ggplot2 gtable nimble plyr reshape2]; }; + exact2x2 = derive2 { name="exact2x2"; version="1.6.3.1"; sha256="0yl0ylgk83w076vbda7yfdvfbwwhhcp89bcv3i6418rz8y7k1ili"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-30"; sha256="02lqs5pw9vii398jz8yr55jk8158xxxqrk1bf55b08xcccxdwrff"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; exactextractr = derive2 { name="exactextractr"; version="0.1.1"; sha256="0jazvagfy9m68f0z3imvs9vdbmviybssiw7vzragxy85m4dgkvzm"; depends=[raster Rcpp sf]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exampletestr = derive2 { name="exampletestr"; version="1.5.1"; sha256="1rk92ld5s812a2njs4fwidz7s2yjwbs7gf8chp7hcjw7pw81nbm4"; depends=[checkmate filesstrings fs glue magrittr ore purrr readr rlang roxygen2 stringr styler usethis withr]; }; + exampletestr = derive2 { name="exampletestr"; version="1.5.2"; sha256="0lfhgjirsl2b1vksjfrw3wlvw6x34d20vldh313qkjrg2yihpk1q"; depends=[checkmate filesstrings fs glue magrittr ore purrr readr rlang roxygen2 stringr styler usethis withr]; }; exams = derive2 { name="exams"; version="2.3-4"; sha256="1sa76qnzf7llj97xc41l2s8n4fqlg1wcvyq9sq59f1blfwxcnnd7"; depends=[]; }; exceedProb = derive2 { name="exceedProb"; version="0.0.1"; sha256="02pb8b0rxygbv6501rcr2hb0bhz1r78k5znav161kk25fb9bxs5v"; depends=[BH Rcpp]; }; excelR = derive2 { name="excelR"; version="0.3.1"; sha256="15frhi1laiwbd2izfm91ilvzcyl97svmx6slca5j2c6v5db3vzmq"; depends=[htmlwidgets jsonlite]; }; @@ -7312,29 +7450,27 @@ in with self; { exifr = derive2 { name="exifr"; version="0.3.1"; sha256="0394f04wq5dnqbnbaq7gxv4ggis4kf3b8dhhjzlybsbip6nmv54x"; depends=[curl jsonlite plyr rappdirs tibble]; }; exiftoolr = derive2 { name="exiftoolr"; version="0.1.2"; sha256="18q23lmazqw5vjvpz9kbd8i8ljchm8nakh726ic3qqzsckl98psp"; depends=[curl jsonlite]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; - expSBM = derive2 { name="expSBM"; version="1.1"; sha256="10l2in6l5l61lrj2rrf5rjgphb7px3xb8alx976vksq96c5l9rdj"; depends=[gtools mclust Rcpp RcppArmadillo]; }; + expSBM = derive2 { name="expSBM"; version="1.3.5"; sha256="0k8nkwqrcmmhv0x8a2np1rm5cyc9glyvndwdbnp03v0wrg8121sw"; depends=[blockmodels gtools mclust Rcpp RcppArmadillo]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; expands = derive2 { name="expands"; version="2.1.2"; sha256="15r5wld63kwk3kcl5x09dj0n1mgcl076lcjsmf0vbh10x4n0avrk"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; experiment = derive2 { name="experiment"; version="1.2.0"; sha256="0f8h4pj2y7cd2s1q44q4mrg9cirnpz0bkn4xm04hz1rpjxb4xlv1"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-5"; sha256="12ki8j17p070kq2mdzzai755wy1n6kvinax0ldd63kynij9n0gdh"; depends=[]; }; explor = derive2 { name="explor"; version="0.3.5"; sha256="1v3z067w5kskwr0wmrr26m3yfsmg9pf17ma9ck2srgyxqmddc0sj"; depends=[dplyr DT formatR ggplot2 highr RColorBrewer scatterD3 shiny tidyr]; }; - explore = derive2 { name="explore"; version="0.5.0"; sha256="1065mn2dvh29bs3yn4m8djni17fnl3icsqs9yg317617pw31xf14"; depends=[broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny]; }; + explore = derive2 { name="explore"; version="0.5.2"; sha256="1j3izj31595wcmv85hkdlyhgbm4cydr44c6vgjjacbmawxc2zm8r"; depends=[broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr]; }; exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; expm = derive2 { name="expm"; version="0.999-4"; sha256="15k0acg2aqb2ajhwal6l7vhhp03m4lg579805d34554cl0kn9l2q"; depends=[Matrix]; }; - expoRkit = derive2 { name="expoRkit"; version="0.9.4"; sha256="186wnnx0gygnzrhhnsjysvwqccpxrcgy4pnvkyz6v3kcgg0n2x6j"; depends=[Matrix SparseM]; }; export = derive2 { name="export"; version="0.2.2"; sha256="03i3jk4b9q1sak6m36p349bzqcwfq3bw6y8sgrw65475mrwipm4m"; depends=[broom flextable officer openxlsx rgl rvg stargazer xml2 xtable]; }; expose = derive2 { name="expose"; version="0.0.3"; sha256="0dlxlxm3g9d8vmgp13i1825z1jzah94ih1vyif46s43xq0nf9anj"; depends=[e1071 foreach gam ggplot2 glmnet Matrix nnet polspline RColorBrewer Rcpp repmis SuperLearner xgboost]; }; expp = derive2 { name="expp"; version="1.2.4"; sha256="00r5f80wnz91n0ksp1dvrxpd6zyfis2v3rizsnm7qqnnwj3d4q1c"; depends=[deldir rgeos sp spatstat spdep]; }; expperm = derive2 { name="expperm"; version="1.6"; sha256="0cybna0q3qn3slyc4lv5rby4pr0xkwq0h6n7hl1zhsaqv4c2zc5b"; depends=[Rcpp]; }; - exprso = derive2 { name="exprso"; version="0.5.1"; sha256="02fz2awxxgf5avnnvv10kr20zvzdmal7z9jbmjxzw5kjqrcv7jci"; depends=[cluster e1071 frbs glmnet kernlab lattice MASS nnet plyr randomForest ROCR rpart sampling]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; - expss = derive2 { name="expss"; version="0.9.1"; sha256="1lz09kwwvsqxcyj4qkikdl4sxcr9vni01xgxv8ivisg110xhi3ls"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; + expss = derive2 { name="expss"; version="0.10.1"; sha256="0pqvv8y3v00ymamz0xxbccb1pyic6h62hr5qm4hyw2sa82hh74dp"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; expstudies = derive2 { name="expstudies"; version="0.0.5"; sha256="07li3lf7gnziws452arv38dayc30dym30qkw5d3ifp6za1aih5pv"; depends=[dplyr lubridate magrittr Rcpp]; }; exptest = derive2 { name="exptest"; version="1.2"; sha256="0wgjg62rjhnr206hkg5h2923q8dq151wyv54pi369hzy3lp8qrvq"; depends=[]; }; exreport = derive2 { name="exreport"; version="0.4.1"; sha256="0vj60rchhrc5q6x1kv7b95fcmh2a5qynli2w54rrrw1nx54xm8c2"; depends=[ggplot2 reshape2]; }; exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; }; - extRemes = derive2 { name="extRemes"; version="2.0-10"; sha256="08fj72gpq2d6695hbm3cgwgal64z009ykrirby7g6r0akfcsx5ic"; depends=[distillery Lmoments]; }; + extRemes = derive2 { name="extRemes"; version="2.0-11"; sha256="0hmgynxhzswqnhwb2sxrkczgam8c17s3vpxqc5bcz0bwczpxxyvm"; depends=[distillery Lmoments]; }; extWeibQuant = derive2 { name="extWeibQuant"; version="1.1"; sha256="08dzw5xfgqx0c7ac632c5mg5jmjjw7wwpcr4c9lvz5rv72ykh2rh"; depends=[]; }; extdplyr = derive2 { name="extdplyr"; version="0.1.4"; sha256="0rxwpspn3905f4l27cwgi9rlj379hb6b4kkb0kjq8gzpkg2fznh1"; depends=[dplyr lazyeval tidyr]; }; exteriorMatch = derive2 { name="exteriorMatch"; version="1.0.0"; sha256="0cdfj1n502iws1g03rk7x0c18zyazqf3vci9kjm6lrv4j2qwrvip"; depends=[]; }; @@ -7345,20 +7481,25 @@ in with self; { extraTrees = derive2 { name="extraTrees"; version="1.0.5"; sha256="1rvvp2p9j8ih8fid1n17606pa23bjg3i2659w1l6w0jkb1p23zcx"; depends=[rJava]; }; extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; extrafontdb = derive2 { name="extrafontdb"; version="1.0"; sha256="115n42hfvv5h4nn4cfkfmkmn968py4lpy8zd0d6w5yylwpzbm8gs"; depends=[]; }; + extraoperators = derive2 { name="extraoperators"; version="0.1.1"; sha256="1clyp97ssmdq9ggbv3w5yskx7khnlm4ji7ym3k3b4bx1pazcw4q4"; depends=[]; }; + extremeIndex = derive2 { name="extremeIndex"; version="0.0.1"; sha256="0qyf7ban7cm9fnznbf78xffcfp5sc32s7kb3wn53mc5abgiad90b"; depends=[boot evd evir gmm goftest]; }; extremeStat = derive2 { name="extremeStat"; version="1.4.0"; sha256="0fvkvlm47ri05w9h5qa937ijsc5lg51jc825wq9pmn7aiv58yxzm"; depends=[berryFunctions evd evir extRemes fExtremes ismev lmomco pbapply RColorBrewer Renext]; }; extremefit = derive2 { name="extremefit"; version="1.0.2"; sha256="07gx6dp0kz4y1jn90hsfvkhn6k7i4flh7ghdz9v5nwda86f55q2s"; depends=[]; }; extremevalues = derive2 { name="extremevalues"; version="2.3.2"; sha256="0pyngxljdnjwnbwcb0gmxcirv70r1s1wyq4m1wm5rprpdj8v9xil"; depends=[gWidgets gWidgetstcltk]; }; extremis = derive2 { name="extremis"; version="0.90"; sha256="1cnwn70d9swks5b2y915l18gky9v23vaqlaaggshi0ghn3snb4sm"; depends=[emplik]; }; extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; exuber = derive2 { name="exuber"; version="0.3.0"; sha256="1g0cr7lgj8j5qdvrm7zmafhqafi1iwln590pcmfrfs37cynd5fkx"; depends=[cli doSNOW dplyr foreach generics ggplot2 glue gridExtra lubridate purrr Rcpp RcppArmadillo rlang tibble tidyr zoo]; }; + eyeTrackR = derive2 { name="eyeTrackR"; version="1.0.0"; sha256="1spv9167fw0nkwm98l5dkl9xs293c624gh87zrisjq4b4xawgxgx"; depends=[data_table plyr stringr]; }; eyelinker = derive2 { name="eyelinker"; version="0.2.0"; sha256="14rfcdxad9iazwd46q6bm8gg1ryh6s8kf7arj00hhb7xz3gvk9c2"; depends=[intervals readr stringi stringr tibble]; }; eyetracking = derive2 { name="eyetracking"; version="1.1"; sha256="0ajas96s25hjp3yrg42hp78qjhl1aih04mjirkskx32qsyq5hfpv"; depends=[]; }; eyetrackingR = derive2 { name="eyetrackingR"; version="0.1.8"; sha256="18bz8fhy2hph7h8mm7hdhjfhi5gznj4qcl05rk3n99hkxl24qn73"; depends=[broom dplyr ggplot2 lazyeval purrr tidyr zoo]; }; ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; + ezCutoffs = derive2 { name="ezCutoffs"; version="1.0.0"; sha256="0awi63f4hk35gd55w7axshlyb1vpwb64sw5y3733ag5cbgk30jkz"; depends=[doSNOW foreach ggplot2 lavaan moments progress]; }; + ezcox = derive2 { name="ezcox"; version="0.2.0"; sha256="0ymvy17yzbzq7g9d8hk30pi3hvsmvxiym9v3j5ivpvy679j3w0iw"; depends=[dplyr magrittr purrr rlang survival]; }; ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; }; ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; }; ezknitr = derive2 { name="ezknitr"; version="0.6"; sha256="060a2175zh1nhzmqgz1mpj2c6721n5w5bv695jj4rbl2s2b2h4qj"; depends=[knitr markdown R_utils]; }; - ezpickr = derive2 { name="ezpickr"; version="1.1.0"; sha256="0l547xf0k3y0v8yqn2pxrd1m1p5j5sbdsvrljlk7nn470jk54048"; depends=[haven jsonlite magrittr mboxr purrr readr readxl rmarkdown stringr textreadr tibble vroom writexl]; }; + ezpickr = derive2 { name="ezpickr"; version="2.0.0"; sha256="1x7v7zsr8hjrwi48dkryqryp607550gs77b058qcdgcdznlqwzp2"; depends=[haven jsonlite magrittr mboxr purrr readxl rmarkdown stringr textreadr tibble vroom writexl]; }; ezplot = derive2 { name="ezplot"; version="0.3.1"; sha256="1cs5i3ik6q6s30z8nh6ckc68vcqkf1hnzy3wn6d0rypmny7jkfkc"; depends=[dplyr forcats ggplot2 rlang]; }; ezsim = derive2 { name="ezsim"; version="0.5.5"; sha256="03x75vmf75qsmk4zb09j7xrb11w31rpfwd3dvv12nwjgndh9bnld"; depends=[digest foreach ggplot2 Jmisc plyr reshape]; }; fANCOVA = derive2 { name="fANCOVA"; version="0.5-1"; sha256="034m2mmm6wmsjd41sg82m9ppqjf4b1kgw5vl2w7kzqfx0lypaiwv"; depends=[]; }; @@ -7402,14 +7543,15 @@ in with self; { factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; factorial2x2 = derive2 { name="factorial2x2"; version="0.1.0"; sha256="186qnz09hkf3njb07rfrs42m3m3288h89ppzlfzrv00765r74yq6"; depends=[mvtnorm survival]; }; factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; - factorstochvol = derive2 { name="factorstochvol"; version="0.9.2"; sha256="0yaf7j2d77m0kmgm8n2j4a0ai9b0lz29r9xjk3zk8sw8aabjlkaw"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; + factorstochvol = derive2 { name="factorstochvol"; version="0.9.3"; sha256="15gamzznss9vfmbvbk61sgabxfsra2i49bs142jl1ahk7wchiskw"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; factory = derive2 { name="factory"; version="0.1.0"; sha256="1715bx2rn8kk5qd196jnrv5f95l54n4y0aqqdzfkgrmqihcy8ahx"; depends=[purrr rlang]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; + fairadapt = derive2 { name="fairadapt"; version="0.1.0"; sha256="01ing7mm1asfgh4w8cc7f7fpv13lja97vv5skk5bri00zycwcqfd"; depends=[ranger]; }; fairness = derive2 { name="fairness"; version="1.0.1"; sha256="1n17vrp0a3zii3444a2a7k33ffmyxmm15c8m7ln2fypya1z2pc5l"; depends=[caret devtools e1071 ggplot2 pROC]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.4.1"; sha256="0jmcbdq5gp7abqiihn8zi2l0whiwnc763lqrk2wflac4d0zw275z"; depends=[callr igraph MakefileR withr]; }; + fakemake = derive2 { name="fakemake"; version="1.6.0"; sha256="019dwh7n7k2djrpm0kik5qn7w3ifszppmpraqn4jyddn1jmllsn3"; depends=[callr igraph MakefileR withr]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam_recrisk = derive2 { name="fam.recrisk"; version="0.1"; sha256="1lyrq7bq7p7ijc2vf545nazw4akncz08548ya1dv3lsc5jmkgfzj"; depends=[]; }; @@ -7424,11 +7566,11 @@ in with self; { far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; farff = derive2 { name="farff"; version="1.1"; sha256="0d3d343jjjwsb132ph12h3r044j3bc4jp94ayikjyq1lmwwsfr4k"; depends=[BBmisc checkmate readr stringi]; }; - farver = derive2 { name="farver"; version="1.1.0"; sha256="1dllgx121al374gyp9pjv1m8ip4imm8zhbgyh1970dsz2c4z71i0"; depends=[Rcpp]; }; + farver = derive2 { name="farver"; version="2.0.1"; sha256="0aq1hk561pz3s3lpay1adwsihha6mxp7zbj4n1m6307g34awlhhn"; depends=[]; }; fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; }; fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; - fastDummies = derive2 { name="fastDummies"; version="1.5.0"; sha256="043289gfyc3f1crfy1861jzs2gsc4pwxl0inxv9xi9scxazwyphi"; depends=[data_table tibble]; }; + fastDummies = derive2 { name="fastDummies"; version="1.6.0"; sha256="0fkmc1kr11vf3pikj5is5951dx79705c7djfvg7bsbbvpvll0crj"; depends=[data_table tibble]; }; fastGHQuad = derive2 { name="fastGHQuad"; version="1.0"; sha256="1rjia8wggadr9xwxcmzmal0rc4g6pa3dr5888fbbnb6abl8b2lrj"; depends=[Rcpp]; }; fastGraph = derive2 { name="fastGraph"; version="2.1"; sha256="0lz199607hqpwxzhff4jzhmjq6cbakd335iyclmlscllgfzgnhql"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; @@ -7439,7 +7581,8 @@ in with self; { fastNaiveBayes = derive2 { name="fastNaiveBayes"; version="2.1.0"; sha256="0gjhprbgrvc42nzz6ya6331cgrfqn08q3vwnd3s3fd4a2ig5xn2k"; depends=[Matrix]; }; fastR = derive2 { name="fastR"; version="0.10.3"; sha256="1sz6krxiamq3rp4h9ah2b1zvyyrlvsn7lpvrjv1xda2c1kqqkvmk"; depends=[lattice mosaic mosaicCalc mosaicData]; }; fastR2 = derive2 { name="fastR2"; version="1.2.1"; sha256="15mqsdy79zvd4srrszdjp0kh9lfcq3yxp7j5d4xcqbjbwsgy68il"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; - fastSOM = derive2 { name="fastSOM"; version="1.0.0"; sha256="1x4kxys7mxlxz7cfbjig44za8m8p19xgzcs5y2wn9320sx8b0wc0"; depends=[]; }; + fastSOM = derive2 { name="fastSOM"; version="1.0.1"; sha256="1fzy7lfx1fn9993h0qh6vbwq0w4gfgbdrprmzb1z3aqq6nqvmngm"; depends=[]; }; + fastStat = derive2 { name="fastStat"; version="1.3"; sha256="1f4554p487l7cig2xihfbgl55x7w04xbazd01pic0l8819mgmy5n"; depends=[car do e1071 ggplot2 ggrepel plyr reshape2 set survival tseries]; }; fastTextR = derive2 { name="fastTextR"; version="1.0"; sha256="0l0f9jvsa68a3vd6mwbhsqd12729nd6nwsnlzrhsg9wj9rx8kpmi"; depends=[Rcpp]; }; fasta = derive2 { name="fasta"; version="0.1.0"; sha256="0wnppxn3039dj58xm0b66fsyq537bk8k8m56im11xj1iwc3zc6vw"; depends=[]; }; fastclime = derive2 { name="fastclime"; version="1.4.1"; sha256="0zcir8r11b2hxr9vvkmvxlzmhfcaxbr0wbjy86ysr912mp8fs9i3"; depends=[igraph lattice MASS Matrix]; }; @@ -7452,12 +7595,15 @@ in with self; { fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; fasterize = derive2 { name="fasterize"; version="1.0.0"; sha256="0q8n1r5n06yr6vmnwrdajx8923646bzm7ywgn2f0zxl214plf56s"; depends=[raster Rcpp RcppArmadillo sp]; }; fastglm = derive2 { name="fastglm"; version="0.0.1"; sha256="1vqw02j4y28mngki87r42f1mhlkvajqp2gpbvk0l2adrkz70l0bn"; depends=[Rcpp RcppEigen]; }; + fastlogranktest = derive2 { name="fastlogranktest"; version="0.1.0"; sha256="0c0cv0a0y97grjywlcp71z6cnjgvaih4bnf2f332iq2lh6kb0j1x"; depends=[BH Rcpp]; }; fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; - fastmap = derive2 { name="fastmap"; version="1.0.0"; sha256="1mmqxzcdb64mj5i9fgcxlp1d547fgamja743y40b8v85pw9yz5gz"; depends=[]; }; + fastmap = derive2 { name="fastmap"; version="1.0.1"; sha256="1v7sp56xiha0bh78g3w92k52p9vkp7ryzpw0z66nyddxzrfv0y27"; depends=[]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; fastnet = derive2 { name="fastnet"; version="0.1.6"; sha256="16jdwvk1xhl6bn9fx5s8pzvbizx6c0jmg6arqf201a7ghw2wi4xh"; depends=[doParallel foreach igraph tidygraph]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.2"; sha256="12x3lkg5zc4ckyg4x3xxqb779yhrr0fys7asf5b8shz49f86fmm9"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; + fastrtext = derive2 { name="fastrtext"; version="0.3.4"; sha256="0k38290pz92ysw57298nng7bbghf5cicvin7l9q6l89pk3qa5wp0"; depends=[assertthat Rcpp]; }; + fastshap = derive2 { name="fastshap"; version="0.0.2"; sha256="1nf3aslcrysi6s4i13qjldal8ghqbpj1fcx8vh5yaqwi7snnj3k1"; depends=[ggplot2 gridExtra plyr Rcpp RcppArmadillo tibble]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.3"; sha256="00pnzr3v7vm965b3cvgplasw00akmixybvm6l9bn609c2kqbf5p3"; depends=[kinship2 multgee]; }; fauxpas = derive2 { name="fauxpas"; version="0.2.0"; sha256="0l77gxcf06p984z9vgaf1kag609h9qyrgav84lxkv97h6f3fflnc"; depends=[httpcode R6 whisker]; }; @@ -7476,14 +7622,16 @@ in with self; { fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; fdANOVA = derive2 { name="fdANOVA"; version="0.1.2"; sha256="1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="2.4.8"; sha256="0n39rzbhg1hipzn51rzmbchn2358qgapg08iv7lmiqj5y7i9qns2"; depends=[Matrix]; }; - fda_usc = derive2 { name="fda.usc"; version="1.5.0"; sha256="135ggfmmbn2crnzmk34hpqxdi51pflqihkz7zpnhx49860fad0fd"; depends=[fda MASS mgcv nlme rpart]; }; + fda_usc = derive2 { name="fda.usc"; version="2.0.0"; sha256="02ji65wq7kn6isl9nbiwh52vximd52sfg22mnc00vkqxdkrb9s8c"; depends=[doParallel fda foreach iterators MASS mgcv nlme]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.6"; sha256="0hyhb67qvvhyq68k5h4ffvsl4lmw66nfy5l14kwxnn42h3b810sc"; depends=[Formula Rcpp RcppArmadillo]; }; + fdaPDE = derive2 { name="fdaPDE"; version="0.1-6"; sha256="0vi5mjmyrj2slzmvnkpnrlw67na7470ka97q9vadcjiwvfc6kv7c"; depends=[RcppEigen rgl]; }; fdadensity = derive2 { name="fdadensity"; version="0.1.1"; sha256="0jj5gprv3ihdjic261czqnv7c13mxsmjmv7gn2gv4483kgijlkz9"; depends=[fdapace Rcpp]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; fdapace = derive2 { name="fdapace"; version="0.5.1"; sha256="0i9y9vz676jspanbbrfbygyq5bxplcv4c5q4yql1y0r8zkg4xq2z"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; fdasrvf = derive2 { name="fdasrvf"; version="1.9.2"; sha256="0hdxpin1ydc9sl9wp5axn6sj2mwlhndxya92ss1i8lj1cxmlz42d"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; + fdistr = derive2 { name="fdistr"; version="0.1.0"; sha256="1i9nq4jmszbmwk4m6jfn7rifsn7aay40cj6kz23b9ihj3phqffi8"; depends=[dplyr ggplot2 magrittr usethis]; }; fdm2id = derive2 { name="fdm2id"; version="0.9.0"; sha256="0mdqgq6jff1dnnnyhlh0fhdnir88b49aqzaph38f2k57fliaydq8"; depends=[arules car caret class cluster e1071 FactoMineR flexclust fpc glmnet ibr irr kohonen leaps MASS mclust mda meanShiftR NMF nnet pls questionr randomForest ROCR rpart Rtsne SnowballC stopwords text2vec wordcloud xgboost]; }; fdq = derive2 { name="fdq"; version="0.11"; sha256="1lzv1pmzjixp8wpap0w3lad1ns9z2hjbxkfpyp9jy9mxprj1w3q9"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.3"; sha256="17nzqy4i1c5kcqyps52827q5apyjn4znb1ql4qvfm8v2m1fvily3"; depends=[MCMCpack qvalue]; }; @@ -7518,11 +7666,13 @@ in with self; { fftw = derive2 { name="fftw"; version="1.0-5"; sha256="037jnf0hgjlw4k2yj8kl9vi8h6vzsff261hn35f1kndywpl4zjdg"; depends=[]; }; fftwtools = derive2 { name="fftwtools"; version="0.9-8"; sha256="1nqvpzda281rxi1cmwajxxsn3sc3gz7scv8bvs5jm34kf36whha6"; depends=[]; }; fgac = derive2 { name="fgac"; version="0.6-1"; sha256="0paddf5a4w0g2i0ay7my0bppwh534d8ghy6csfxl5jj034xjgwkk"; depends=[]; }; + fgdr = derive2 { name="fgdr"; version="1.0.0"; sha256="0wf0ayn2vx2pkid08ssr7ygq9k9qxsw86wwppm2r9b7i8cw7kbf8"; depends=[jpmesh magrittr purrr raster readr rlang sf sp stars stringr tibble xml2]; }; fgeo = derive2 { name="fgeo"; version="1.1.4"; sha256="0axglmk05li3plb79rccskhddjzq3pdx3mgxr8yqysymf1nscrq6"; depends=[cli crayon dplyr fgeo_analyze fgeo_plot fgeo_tool fgeo_x glue magrittr purrr rlang rstudioapi]; }; fgeo_analyze = derive2 { name="fgeo.analyze"; version="1.1.11"; sha256="148ks0y8k29v5z69g04k2l1ncml18xcwgagi6mngj72b4h3cpc6p"; depends=[dplyr fgeo_tool glue lubridate magrittr MASS purrr rlang tibble tidyr withr]; }; fgeo_plot = derive2 { name="fgeo.plot"; version="1.1.9"; sha256="18zw4bsqdqdpy103kdyl40162mii6s1lp2w4cpi50svx7g7xhgh5"; depends=[dplyr fgeo_tool ggplot2 ggrepel glue magrittr purrr rlang stringr]; }; fgeo_tool = derive2 { name="fgeo.tool"; version="1.2.5"; sha256="1sy0w2n2727v44fv56zijj03q732q3qnxyn1r1j8spmb257bhvn6"; depends=[dplyr glue magrittr purrr readr rlang tibble tidyselect]; }; fgeo_x = derive2 { name="fgeo.x"; version="1.1.4"; sha256="0swps9rli74fmfb2j4kf55kw39gxz0q49m74ad4vcs0ylyp0sxrb"; depends=[memoise]; }; + fgm = derive2 { name="fgm"; version="1.0"; sha256="0i6lbqxxjq78dql14qwqs7slnn0kyls2g3a9biabny2narwf6n3m"; depends=[fdapace JGL]; }; fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; }; fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-8"; sha256="024fzd1c7iwqprn26hwjb9l2qlvvyzl449d7iixy0x69djwsrysv"; depends=[]; }; @@ -7530,7 +7680,7 @@ in with self; { fiberLD = derive2 { name="fiberLD"; version="0.1-6"; sha256="1i3bl2qsc77m81l11an9ihl4vy86s8jd5x6pasib77rl2877ad4x"; depends=[doParallel foreach Matrix VGAM]; }; fic = derive2 { name="fic"; version="1.0.0"; sha256="18xz94w1ab17jfi61bdg9z3pm63g488v17ns2ivizkza4gg07pv8"; depends=[abind ggplot2 mvtnorm numDeriv scales survival tensor]; }; fieldRS = derive2 { name="fieldRS"; version="0.2.2"; sha256="0jrcdsv46zx7six9ll5sha32wx36wqajaladj6z8xym2n9ay8d5b"; depends=[caret concaveman ggplot2 raster rgeos sp spatialEco stringdist]; }; - fields = derive2 { name="fields"; version="9.8-6"; sha256="07x95vk1idjfzi5ikn0ijal754mssdmgr1p4nswmx9w3i5ndcqaz"; depends=[maps spam]; }; + fields = derive2 { name="fields"; version="10.0"; sha256="173zm5vr236ydiq0v27qy0l3x7h9fc7jly38iakg77j26i0a01il"; depends=[maps spam]; }; fiery = derive2 { name="fiery"; version="1.1.2"; sha256="01ahdvcag8ifpp6jl6cgjjrchwxbr9fzvzqysj77kg3n5dcqm6cl"; depends=[assertthat crayon future glue httpuv later R6 reqres stringi uuid]; }; filehash = derive2 { name="filehash"; version="2.4-2"; sha256="14zv7h5195dmfksgk8qvjgc2qq8253vga6267aa1bqs5bpvmdl5n"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; @@ -7542,7 +7692,8 @@ in with self; { filesstrings = derive2 { name="filesstrings"; version="3.1.5"; sha256="072alawp6j08mwlw1pz50g3lfi726kpsc744x5fvy71d7w4gqn6l"; depends=[checkmate magrittr matrixStats ore rlang strex stringi stringr tibble withr]; }; filling = derive2 { name="filling"; version="0.2.0"; sha256="0yxixwgvn7jq09j4r3q33mmdda9a4anfi7y0xqscbdjz6p9bx48w"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; fillr = derive2 { name="fillr"; version="0.1.1"; sha256="01z4841hxnpf8s9s327fqprb4gl9k8pkyv2mgc5vfl86r1pd7m1b"; depends=[]; }; - finalfit = derive2 { name="finalfit"; version="0.9.5"; sha256="1r4gv3yxwyqy9bh63n3zajbz3jzn7lnvj5nzzvxhmi01ig43x6c1"; depends=[boot broom dplyr forcats GGally ggplot2 gridExtra Hmisc lme4 magrittr mice pillar plyr pROC purrr readr scales stringr survival survminer tibble tidyr]; }; + finalfit = derive2 { name="finalfit"; version="0.9.7"; sha256="1y1fllbrqy4q79w4l3830aqlf32v4clfzajqnwiylxwxw71v7yaa"; depends=[boot broom dplyr forcats GGally ggplot2 gridExtra Hmisc lme4 magrittr mice pillar plyr pROC purrr scales stringr survival survminer tibble tidyr]; }; + finbif = derive2 { name="finbif"; version="0.1.0"; sha256="1bvic9nbqz3qs24ldf1zsqfijvw3jl8frbm8pyxn8cpgdgkj9kq1"; depends=[digest httr jsonlite lubridate lutz]; }; finch = derive2 { name="finch"; version="0.3.0"; sha256="1cglyq3b0cvl05yrnpy6xn0nj0n817hgpcsxp3m07cvj8xidib02"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; }; findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; findpython = derive2 { name="findpython"; version="1.0.5"; sha256="0icifm4z6hhpmcjrg75a875iph0ci890ss02kdv3725pijc236iy"; depends=[]; }; @@ -7550,7 +7701,7 @@ in with self; { fingerPro = derive2 { name="fingerPro"; version="1.1"; sha256="1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL RcppProgress reshape rgl scales]; }; fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; }; fingertipsR = derive2 { name="fingertipsR"; version="0.2.9"; sha256="03zj7qqh3yzsvw3a36c8jfci9fz4n0ylzzvlw3dlsi9637xcc9pz"; depends=[curl dplyr DT httr jsonlite miniUI readr shiny shinycssloaders]; }; - fingertipscharts = derive2 { name="fingertipscharts"; version="0.0.9"; sha256="18lm9xn464grcrw97gdl0yhmb4j0wkwwfbsxpz3zqk5cmbgljamy"; depends=[curl dplyr fingertipsR geojsonio ggplot2 httr leaflet lemon mapproj purrr rlang scales sf stringr tibble tidyr]; }; + fingertipscharts = derive2 { name="fingertipscharts"; version="0.0.10"; sha256="1l3mirspz28djlzma04lkkynfbz8qfq0asr662q102j31qx6vnm4"; depends=[curl dplyr geojsonio ggplot2 httr leaflet lemon mapproj purrr rlang scales sf stringr tibble tidyr]; }; finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; }; fipe = derive2 { name="fipe"; version="0.0.1"; sha256="055jav8h4wws76jahm2d5dj49wkvzchh3f2vk5d50pny4dc7smar"; depends=[dplyr forcats furrr future httr jsonlite lubridate magrittr purrr readr stringr tibble tidyr]; }; @@ -7562,9 +7713,11 @@ in with self; { fishmethods = derive2 { name="fishmethods"; version="1.11-0"; sha256="0ikxvq0mkw0s382ias04il06sbqfiq8phx69f5pdzvbm5xskzmxs"; depends=[boot bootstrap lme4 MASS numDeriv]; }; fishmove = derive2 { name="fishmove"; version="0.3-3"; sha256="1knbv087cg0czjcgdbrlpg69pp1dxb57b7ak5j1mcy7ay3a41a9h"; depends=[boot ggplot2 MASS plyr]; }; fishtree = derive2 { name="fishtree"; version="0.3.1"; sha256="17iqwgh2ap4mjx7i4bwdbhzp3qlwwb4rr4zw0kg26va8rl3ycphn"; depends=[ape jsonlite memoise rlang]; }; + fishualize = derive2 { name="fishualize"; version="0.1.0"; sha256="17ywlnjq1digkc73r9bc0czdwh7f3sp8lzbh53rx99dad7bpm9kd"; depends=[ggplot2 gridExtra png]; }; fit_models = derive2 { name="fit.models"; version="0.5-14"; sha256="0vjbzmx0ambm6yzidb4vbgmhclwzwv2iz2cwl54ccdkvx4cx3fck"; depends=[lattice]; }; fit4NM = derive2 { name="fit4NM"; version="3.3.3"; sha256="0k2194521yby6xxi77bpjp6ywz8kpnzws217m7n0hw6xwz5mqj1g"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 tkrplot]; }; fitDRC = derive2 { name="fitDRC"; version="1.1.1"; sha256="09z9l27iwl0fd3zy6rsdhmy8qbm5d9a4wcaj5rxp7ynlnpi102aa"; depends=[]; }; + fitHeavyTail = derive2 { name="fitHeavyTail"; version="0.1.1"; sha256="1smziqinv0ls33rchihn9r7x0sirm1ix9zmji8zkw59bpqp4ml94"; depends=[ICSNP mvtnorm]; }; fitODBOD = derive2 { name="fitODBOD"; version="1.4.1"; sha256="06yqp95k13d5zy4md12aqlk8yjk9g7hnnizjzksx46sh6rsn82aw"; depends=[bbmle hypergeo]; }; fitPoly = derive2 { name="fitPoly"; version="3.0.0"; sha256="0ws1vsh8if9i9i7820ak32b0bysjc0z09nbrk17qpms0b11cpc3g"; depends=[foreach]; }; fitTetra = derive2 { name="fitTetra"; version="1.0"; sha256="0ia6wk4gicpmn6kclsd28p7v1npwfv2blagiz0cxzwfw3njv103g"; depends=[]; }; @@ -7574,10 +7727,11 @@ in with self; { fitplc = derive2 { name="fitplc"; version="1.2-3"; sha256="1yg3ch907c4gk7q8hxgwqxgngkmy125j3ni917nkzi7hn59krd1n"; depends=[car nlme]; }; fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; }; fitur = derive2 { name="fitur"; version="0.6.1"; sha256="04lr717lsbb4731nlzgscraj30knik4q68jzrl4i5f27912159r9"; depends=[actuar DT e1071 fitdistrplus ggplot2 goftest miniUI rstudioapi shiny]; }; + fitzRoy = derive2 { name="fitzRoy"; version="0.2.0"; sha256="0c317bibl5az8ak29p0bfznldy1kda433mmxqrr7mc6fv0rd3jh3"; depends=[dplyr glue httr jsonlite lubridate magrittr purrr readr rlang rvest stringr tibble tidyr tidyselect xml2]; }; fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.5.0"; sha256="00cc7kjs54wk2cxbkd14gldsrjmf4i35vwr6c2kfsassvjjhbmpm"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; fixerapi = derive2 { name="fixerapi"; version="0.1.6"; sha256="0ikf8dn0l9c9gshp4bph3wasl0bh6lfybinc8n1rvb202231hmgb"; depends=[jsonlite tibble tidyr]; }; - fixest = derive2 { name="fixest"; version="0.1.1"; sha256="0jnhnxxky8p0wisc5xd031sv1qy8szg163vidl13lqpsahjri3pq"; depends=[Formula MASS nlme numDeriv Rcpp]; }; + fixest = derive2 { name="fixest"; version="0.2.1"; sha256="1zs3jzrsg25hg8jrk1vc82xh5l07qc20109gvyv1m2arxs2ggnhs"; depends=[Formula MASS nlme numDeriv Rcpp]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; }; flagr = derive2 { name="flagr"; version="0.3.2"; sha256="195c78cml2pjzfvpkaxbzcg1dfdqxi76138p0v3x3zzva9d8nlji"; depends=[]; }; @@ -7587,7 +7741,7 @@ in with self; { flare = derive2 { name="flare"; version="1.6.0.2"; sha256="1ybrsx1djqldw0l5l1iz4pfh6xxb8ckkg1ric7wnsr51wm9ljlh5"; depends=[igraph lattice MASS Matrix]; }; flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; - flashlight = derive2 { name="flashlight"; version="0.2.0"; sha256="0ff3v44kpz1dyf7g6vsk8hlw3iwgp5rar7adcx7dy0a87w7kfh99"; depends=[dplyr ggplot2 ggpubr MetricsWeighted rlang tidyr]; }; + flashlight = derive2 { name="flashlight"; version="0.4.0"; sha256="0p44my7786pr0mxncawf607dv696sg9cag201f1c3m75a1zsb4yy"; depends=[dplyr ggplot2 ggpubr MetricsWeighted rlang tidyr]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; flatxml = derive2 { name="flatxml"; version="0.0.2"; sha256="1f7pc3chzimkg23490qvppy63sk4ds3aaahc36sa4dc4qmhabyms"; depends=[RCurl xml2]; }; flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; @@ -7599,7 +7753,7 @@ in with self; { flexrsurv = derive2 { name="flexrsurv"; version="1.4.1"; sha256="13jq7yk7rz2148wkf7dv28l79zwdf1gpfkd5khgacb8hl5kml3p0"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis survival]; }; flexsurv = derive2 { name="flexsurv"; version="1.1.1"; sha256="0x7p1rv51pplfyyzcg63ssb8z56mig7y0363hkr0219w3cvyq9nr"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival tibble tidyr]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="1.0.0"; sha256="1blhwbkp0a3a7xnqyxp952wxkihdxb0xh68sk827h8rxis9zr4z4"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.5.5"; sha256="1q6x9mfk5gikqjbbra1dn8hs1rq5ws99jdjav3m113gx9f2j5yxh"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown xml2]; }; + flextable = derive2 { name="flextable"; version="0.5.6"; sha256="1f869f2dfqkzhf6yix7xcbs8rn1nwq3sg623h74zg6h1pl6px66w"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown xml2]; }; flifo = derive2 { name="flifo"; version="0.1.5"; sha256="03x66l3ryrjvwbxxd0ncjrb5w9kc7fswmp5psb1cb7r87f395gm3"; depends=[bazar pryr]; }; flightplanning = derive2 { name="flightplanning"; version="0.7.2"; sha256="0l7pm4sdjdr0n5njnh4lxydayr55p4i5w2a6i3b998z8fdl0vpv9"; depends=[rgdal rgeos sp]; }; flip = derive2 { name="flip"; version="2.5.0"; sha256="08x5hwxaxbgc745gblja7gcy0b5wbp7jf90lkha75zl5cc9iyksl"; depends=[cherry e1071 plyr someMTP]; }; @@ -7620,19 +7774,19 @@ in with self; { fluspect = derive2 { name="fluspect"; version="1.0.0"; sha256="0j80wx00s8ljqg1qaqw66rj7kxhhk438hb0syv0lr9vld03cxy2w"; depends=[pracma]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; fluxweb = derive2 { name="fluxweb"; version="0.2.0"; sha256="1ssq90fqm4p0j4g171mx208lmgz3hkxs8hgsffkawpmxgacs0gh1"; depends=[]; }; - flyio = derive2 { name="flyio"; version="0.1.2"; sha256="1s5j8gdrxz9xwdfs1b2fypm9679apbk4nn1bik17zwv4shfwyzvy"; depends=[assertthat aws_s3 googleCloudStorageR stringr]; }; + flyio = derive2 { name="flyio"; version="0.1.4"; sha256="1mrv5gvsr4zbh8bghrrizgrqz1cqn4pl3gizr77jl9mlxxpmhx20"; depends=[assertthat aws_s3 googleCloudStorageR stringr]; }; fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; fmcmc = derive2 { name="fmcmc"; version="0.2-0"; sha256="0hczf41pykxz8j9y8d2mqawzk5q9w44875jk4p4pf7jbkff5rzxf"; depends=[coda]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; - fmri = derive2 { name="fmri"; version="1.9"; sha256="1v7aicpds7zbh7p0vizrg5730f98ikqzrp6gmjw9psjwfxv0kmf6"; depends=[aws awsMethods metafor nlme]; }; + fmri = derive2 { name="fmri"; version="1.9.2.1"; sha256="0ij6j3hk3rb2vinhh2jxac085qd258zr4jk60difh5krsk9kksyc"; depends=[aws awsMethods metafor nlme]; }; fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; }; fmsb = derive2 { name="fmsb"; version="0.6.3"; sha256="1n29bnyp20pvpk2lsa9fblsj5w7amp14snc74pk5w3yr5y6rj0s5"; depends=[]; }; foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; - foghorn = derive2 { name="foghorn"; version="1.1.0"; sha256="161smkvx1pzn8sskr137iiqhcm0jp5rrrmc1valamh0zz5glcdk8"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; - foieGras = derive2 { name="foieGras"; version="0.2.2"; sha256="0nllvq81py74hgjci0n0lbi0flr3rrc1ki39xnidpcqkdp9n8ddx"; depends=[argosfilter dplyr ggplot2 gridExtra lubridate magrittr RcppEigen sf stringr tibble TMB]; }; + foghorn = derive2 { name="foghorn"; version="1.1.4"; sha256="1nxz41yhlg28jdihixy2w44nfvaliyfmxibxk58j7hfgyyvlm21s"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; + foieGras = derive2 { name="foieGras"; version="0.4.0"; sha256="0jrxdmsjxc8zjfgcv6n0kili0dzxppy0qdhqaji2ggklzynp4i33"; depends=[argosfilter dplyr furrr future ggplot2 gridExtra lubridate RcppEigen rworldmap sf stringr tibble tidyr TMB]; }; folderfun = derive2 { name="folderfun"; version="0.1.2"; sha256="08kfw7i5xqbk07ssp4j79p3x0gf0jq2fbcq99lb10r6ndcgp5rxp"; depends=[]; }; fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; @@ -7640,6 +7794,7 @@ in with self; { fontMPlus = derive2 { name="fontMPlus"; version="0.1.1"; sha256="1hvviawbfs3m7mr46y2sjdxkksi10vpbnjic11rjaxqcy9a43f4y"; depends=[extrafont ggplot2 hrbrthemes]; }; fontcm = derive2 { name="fontcm"; version="1.1"; sha256="1z6b4qdgj5vhvjqj90sm1hp0fffi1vxzvq71p0flxybzyb7d15la"; depends=[]; }; fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; }; + foodingraph = derive2 { name="foodingraph"; version="0.1.0"; sha256="0v40yk7lx0zxvpd3vz48h5gzx8ds8v3l12i2r7v9safgfvip6fvn"; depends=[cowplot dplyr ggplot2 ggraph igraph labeling magrittr minerva rlang stringr tibble tidyr viridis]; }; foodweb = derive2 { name="foodweb"; version="1-0"; sha256="1zm2a87g9bkpz90j9lax28s5hq1w7ia28qqb6vnvr1d7a47g9zi9"; depends=[rgl]; }; foolbox = derive2 { name="foolbox"; version="0.1.1"; sha256="06lcr5v6bcqqxskrwdm16b46zq4h67x8bwqya88jxs5bgi5w0hj3"; depends=[magrittr rlang]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; @@ -7649,12 +7804,13 @@ in with self; { forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; forecast = derive2 { name="forecast"; version="8.9"; sha256="013xnpj3czcjkwqyzjjjhgy9nd56lwvh6y05ys2lndvcy4vyrqxd"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; forecastHybrid = derive2 { name="forecastHybrid"; version="4.2.17"; sha256="1k3jwxqwkprcf2qr5x1b8hzzdvbyzdiablpvqnr0482x4vza8lmc"; depends=[doParallel foreach forecast ggplot2 purrr thief zoo]; }; + forecastML = derive2 { name="forecastML"; version="0.6.0"; sha256="1jq6dlm9ix81nx61nphg2fzmf1jmlqirhpjnxx8qyhb8gx3jiply"; depends=[data_table dplyr dtplyr future_apply ggplot2 lubridate magrittr purrr rlang tidyr]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.3-0"; sha256="0p47x7ic2ib7znqbp8br4b2ci75f5w8x413z9g4n30m002p7irp1"; depends=[Rcpp]; }; foreign = derive2 { name="foreign"; version="0.8-72"; sha256="124c9229is44p2rv7xyh2q86nsfi7vzyyh5n3c5ihziqrp4ig723"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; forestChange = derive2 { name="forestChange"; version="0.6"; sha256="13zzng022m1jhca0d2w868kqp9h0wfpjmh0xnlb8jl1l4vfc68r9"; depends=[curl raster rgdal rvest SDMTools xml2]; }; - forestControl = derive2 { name="forestControl"; version="0.2.0"; sha256="1w1x7i57dqlrm6zzgx4k0p1zs83nrg2w2jhhvjjk9s6y1ba3whyg"; depends=[dplyr magrittr purrr Rcpp tibble]; }; + forestControl = derive2 { name="forestControl"; version="0.2.1"; sha256="1m75s98bs8n3qad8gp6a333dh3mbi0rbbic9iwnsqyklzkhmx1nr"; depends=[dplyr magrittr purrr Rcpp tibble]; }; forestFloor = derive2 { name="forestFloor"; version="1.11.1"; sha256="1sslxq44qmmmdhr7800bz8lj9w2l7f7x1vly3w2z7j1qdijc7nw7"; depends=[kknn randomForest Rcpp rgl]; }; forestHES = derive2 { name="forestHES"; version="1.0-1"; sha256="05l04ly3l8xkdz3rnnrfa4y0wfmh1am2ixbz1vfarnqkc0zppwpj"; depends=[]; }; forestRK = derive2 { name="forestRK"; version="0.0-5"; sha256="0zm0q7bckmjl1j3yh5pw4r6rq64rfmzjvmvqniza5691jagjz60m"; depends=[ggplot2 igraph knitr mlbench partykit pkgKitten rapportools]; }; @@ -7669,7 +7825,7 @@ in with self; { formatR = derive2 { name="formatR"; version="1.7"; sha256="1nsxbrx31k3y6yql30qkrvdfyznlia2qfvwv95mfiy7m7wdn4rm3"; depends=[]; }; formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.7.1"; sha256="15d3ikfmsh9zszfgfkrxb3jkipl41inm7n6bhs73kwlnklnygq2g"; depends=[operator_tools]; }; - formulaic = derive2 { name="formulaic"; version="0.0.3"; sha256="0y2sq6ql3q2bf050dp9v0z6fn0f36z5k5777ymc8yjnj603xhfkd"; depends=[data_table DT]; }; + formulaic = derive2 { name="formulaic"; version="0.0.4"; sha256="1y5v6zwyzcba3zn8xzn9q94v5cwnkcr406xp3kmj9igxgb24ff0m"; depends=[data_table DT]; }; formulize = derive2 { name="formulize"; version="0.1.0"; sha256="1fz8q48z4zvfglxzmmjznb7lcfrrfqmnws85jfkihs3ff43h7ccc"; depends=[recipes rlang]; }; fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; forward = derive2 { name="forward"; version="1.0.4"; sha256="0qhssp8mymy5wgzfkp1xa8s81j803g0ckg647ind6ms26320hq0x"; depends=[MASS]; }; @@ -7684,11 +7840,13 @@ in with self; { fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; fpeek = derive2 { name="fpeek"; version="0.1.1"; sha256="0x7q5rl02ih0zmjfzvsc1vmn7s7yzdkf2gbmzc3mh7qadwpnf89p"; depends=[Rcpp]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; + fplot = derive2 { name="fplot"; version="0.2.0"; sha256="0sq662qblkq6yngi5d98byjmf2xyfq9rlrg8pl1gr3pn000wi8b3"; depends=[data_table Formula Rcpp]; }; fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; fpop = derive2 { name="fpop"; version="2019.08.26"; sha256="1gz5db9hlkvzkp5y7zzn9h57qz7ilpdyxyf05vy9kxbj36kgc19n"; depends=[]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; fpp = derive2 { name="fpp"; version="0.5"; sha256="1jqnx6bgpvnbbj2fa2b6m6aj8jd5cb9kz877r8kp7a5qj62xv1ww"; depends=[expsmooth fma forecast lmtest tseries]; }; fpp2 = derive2 { name="fpp2"; version="2.3"; sha256="1krrvwg25qjfpfjdwd3n0d87ihl4zf7y1bnh6gbi92sdja3ljq48"; depends=[expsmooth fma forecast ggplot2]; }; + fpp3 = derive2 { name="fpp3"; version="0.1"; sha256="17j5y1y46dn21049rfiwr7j0f5q2kc6jvxdpw252l063dqdb9pd9"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata]; }; fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.4-2"; sha256="03l5dqpqwwi5c8fwc2vissfawcsignai60h2zalknkibvk782dwq"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.7"; sha256="124p5x59smqf8ba0xwhlq69w77zga2bv9plzwkadf700lzvaj2wx"; depends=[emg numDeriv]; }; @@ -7698,7 +7856,7 @@ in with self; { fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; fragilityindex = derive2 { name="fragilityindex"; version="0.1.0"; sha256="06f7w0ff8mmydgylz5a0z29fc78spvmay3sjq0rz9k44w4bb9z3q"; depends=[pbapply stringr survival]; }; frailtyEM = derive2 { name="frailtyEM"; version="1.0.1"; sha256="0ajqmn8353va8k3idsl90xsrhpdqarfmvg84d4kwayxlqy6dmbb0"; depends=[expint ggplot2 magrittr Matrix msm numDeriv Rcpp survival tibble]; }; - frailtyHL = derive2 { name="frailtyHL"; version="2.2"; sha256="0i6r889i4f07w6992nfsfr439psz6k3q79nkkk3zwf5fv5r6bcky"; depends=[cmprsk Matrix survival]; }; + frailtyHL = derive2 { name="frailtyHL"; version="2.3"; sha256="115iv1d2c9mvviick8b24bn6kdbsvnf21nvfjm9a8dk0x07hrv5g"; depends=[cmprsk Matrix survival]; }; frailtySurv = derive2 { name="frailtySurv"; version="1.3.6"; sha256="0k41a5x7qzrajk2l59q5b8kjj084vids4ailr8r7r2lnf6r9xrav"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; frailtypack = derive2 { name="frailtypack"; version="3.0.3.2"; sha256="0kwp7z5m73nx6jcgh6j76lmirpzh2kz3yirwn4iii9qkccrh6jps"; depends=[boot doBy MASS nlme statmod survC1 survival]; }; frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; }; @@ -7712,7 +7870,7 @@ in with self; { freeknotsplines = derive2 { name="freeknotsplines"; version="1.0.1"; sha256="1yl53rnngrpj5mv1fgd0rgiqaw431g4ckxl1bq0l712647njx02a"; depends=[]; }; freestats = derive2 { name="freestats"; version="0.0.3"; sha256="0b18n8idap089gkmjknzzb94dvs2drpdqs0mrw7dqnacxgbbqwfj"; depends=[MASS mvtnorm]; }; freesurfer = derive2 { name="freesurfer"; version="1.6.5"; sha256="0g5rpskwgxx37b60vxn89kf2d6b2y66v508xyrsx3h47q973kjia"; depends=[neurobase R_utils reshape2]; }; - freesurferformats = derive2 { name="freesurferformats"; version="0.1.2"; sha256="1w0a1dvqba6iywab5jnji3ky4l36r4q1jmg773dqwjjwsss2g8n1"; depends=[]; }; + freesurferformats = derive2 { name="freesurferformats"; version="0.1.6"; sha256="17lxy8b4xz7g3anmr2wv70idw37gmlh6cf95k7krqmrrm5a3i369"; depends=[pkgfilecache]; }; freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.5"; sha256="11agmqdp6sy32jk2840cj8wmgywq0yjar18zsnsn56qfvn4b1k1c"; depends=[fontquiver]; }; freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="2.0.1"; sha256="0ig0ygnlcb5ndjjm5x8jpp37gvgwli9xv6zsvbbgfh72q418qswp"; depends=[matrixcalc mvtnorm]; }; @@ -7721,6 +7879,7 @@ in with self; { frequency = derive2 { name="frequency"; version="0.3.1"; sha256="0m3vgcwldl7zv0nwdwfz80qanibmfp8j5iv79kydhrmzzr04rbf5"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.1"; sha256="006cb7x65if7md5w6w90nacdmg39pv7dc8zxvchc52kmfzlps0ds"; depends=[knitr pbapply urca vars]; }; frequentdirections = derive2 { name="frequentdirections"; version="0.1.0"; sha256="0rmifh221c8z3cqyqg0bfxnih9f64hvv98jz44i6grnlablfwwgw"; depends=[ggplot2]; }; + fresh = derive2 { name="fresh"; version="0.1.0"; sha256="101ycxwk1z59zb2p6hfg4a8l565gfqbzmhw60nz22fql4gyhl8q9"; depends=[htmltools rstudioapi sass shiny]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; }; frmpd = derive2 { name="frmpd"; version="1.1.0"; sha256="0irgqdr0vr8k408lsxcrjkjbjvqvmy5mnjw9c1ghs86isrp5mciz"; depends=[]; }; @@ -7732,12 +7891,12 @@ in with self; { frostr = derive2 { name="frostr"; version="0.1.0"; sha256="02ygg5dxpnv72gpwwsarhkl5hk6hldxjqpw875p7hb1ny7khgmfg"; depends=[httr jsonlite tibble tidyr]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; fs = derive2 { name="fs"; version="1.3.1"; sha256="1g26rgx13dzigp2vrlld6h28q33lwbax97zvwdrq2pc3iz54v4yn"; depends=[Rcpp]; }; + fsbrain = derive2 { name="fsbrain"; version="0.0.3"; sha256="1s7i9rpazp5s3vnm9y6ajpy06wbd7gjdzr9mbndjnsb9w985957a"; depends=[dplyr fields freesurferformats pkgfilecache reshape rgl squash]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.4"; sha256="18fhyfl3f8syyc3g937qx87dmwbv7dray6b97p1s6lnssiv61gsw"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.4-6"; sha256="0lj2kaan5n4g2ckj6d4sfvab0a45h164m1fjvqf57c0ymhaswz76"; depends=[ggplot2 reshape2 rJava rrcov]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; fslr = derive2 { name="fslr"; version="2.24.1"; sha256="1psjqvjv8krlkj7dcfwygz563a4cpn7h21z330hxh5q10rwhabi8"; depends=[neurobase oro_nifti R_utils]; }; fso = derive2 { name="fso"; version="2.1-1"; sha256="0hn2ypm0nwfbmnh9il78pi30x7gfmayfangqyh0d63ngyz40bvma"; depends=[labdsv]; }; - fssemR = derive2 { name="fssemR"; version="0.1.5"; sha256="1pxyl8b6nfaxdc86zlfjgyjvmx8ifh46d1lbwc2dknhp7sxc95q5"; depends=[glmnet igraph MASS Matrix mvtnorm qtl Rcpp RcppEigen stringr]; }; fst = derive2 { name="fst"; version="0.9.0"; sha256="0ya5lh8p0qy5pcr6wxsrn43wj1r9gb9qycyn8gvl26ic3hxwk2rf"; depends=[Rcpp]; }; fsthet = derive2 { name="fsthet"; version="1.0.1"; sha256="0z6az1jcvdahgn97r6cpj1s6fn0lvr7j12gcw2r7wbpajrvyl5j6"; depends=[]; }; ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; }; @@ -7745,6 +7904,7 @@ in with self; { fts = derive2 { name="fts"; version="0.9.9.2"; sha256="08pwhi19db173d4nsk5rl8xa8qmaddj4bn3cjxb8ql4kny59i57q"; depends=[BH zoo]; }; ftsa = derive2 { name="ftsa"; version="5.5"; sha256="1c7b3b6zrm45y2110j0dqlgilfiiyx4wqhgdiq82q6kagng32cl1"; depends=[colorspace fda forecast MASS pcaPP pdfCluster rainbow sde]; }; ftsspec = derive2 { name="ftsspec"; version="1.0.0"; sha256="12f9yws1r26i240ijq0xqprl3pgbw50wv68jsm75ycplbs2jsyhs"; depends=[sna]; }; + fuel = derive2 { name="fuel"; version="1.0.2"; sha256="0ziw370ch8g2hnlimxfgski4n28b83jnwrhlh7ibszk0lz593rkr"; depends=[]; }; fueleconomy = derive2 { name="fueleconomy"; version="0.1"; sha256="1svy5naqfwdvmz98l80j38v06563vknajisnk596yq5rwapl71vj"; depends=[]; }; fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; }; fugue = derive2 { name="fugue"; version="0.1.7"; sha256="1myvi9cizxvahb6wn2k26v3x958xsrm2p414ar05injmfjdfnsmi"; depends=[]; }; @@ -7755,22 +7915,23 @@ in with self; { funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; funHDDC = derive2 { name="funHDDC"; version="2.3.0"; sha256="1dym1bzywng5yjfzpppxx043pwcbvrxxq0bn1d6xqqkqcpzn2zhp"; depends=[fda MASS]; }; funLBM = derive2 { name="funLBM"; version="1.0"; sha256="0krx5v1lakrrxk0j249k7sr7c6r40yg1l8l10laf4444j2qn8rjp"; depends=[fda funFEM]; }; - funModeling = derive2 { name="funModeling"; version="1.9.2"; sha256="03kg0iqdijawly1nfw57x8d7sh9s8fd6p83l9450hghg77fbgdpn"; depends=[cli dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales stringr]; }; + funModeling = derive2 { name="funModeling"; version="1.9.3"; sha256="0dqpb5igdpdnbwr6y8wr11hcn84clshnx0q913512jvcrx0h0pd9"; depends=[cli dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales stringr]; }; funbarRF = derive2 { name="funbarRF"; version="1.0.2"; sha256="14xfhwp4vffl215fqdxdxpmjblyw75ylxqjzja794adywm06sz19"; depends=[BioSeqClass Biostrings randomForest]; }; funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; funcy = derive2 { name="funcy"; version="1.0.1"; sha256="08r9nyqq83vzaddxcqwf4zilkz935p40vssfn3afs1bkkda5xyya"; depends=[calibrate car cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; - fungible = derive2 { name="fungible"; version="1.86"; sha256="0k59drwc0z1l67bkc49nmpdf8p6m5xwdxfhjbw83y5pxdjgzvj9q"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; + fungible = derive2 { name="fungible"; version="1.93"; sha256="03v15qf5mlfllx8kb82ajq3lg8pssi20ffkszxbn20y8q4m2rapq"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; funique = derive2 { name="funique"; version="0.0.1"; sha256="0p9k4nxjns1xid9vmslkaap0hm6yq6pbyvylgygd808if4q1z8k6"; depends=[]; }; funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; + funprog = derive2 { name="funprog"; version="0.1.0"; sha256="1npyijpsbb9n3z8pyvf2pbnf67jlcqw4wl2jm860i3z13j1cnhmn"; depends=[]; }; funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; funrar = derive2 { name="funrar"; version="1.3.0"; sha256="0bby03hjzcsy2chh7l5170ba12jbid6485nsjxapajv6gdzzpk58"; depends=[cluster dplyr]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; funtimes = derive2 { name="funtimes"; version="6.1"; sha256="1qr0z0nn3dv2yxq4sacsm0xs4pnda31zc10rz427rdyjrps85838"; depends=[dbscan Jmisc Kendall Rdpack]; }; furniture = derive2 { name="furniture"; version="1.9.0"; sha256="17cik8r3dbv1a4d17ail7im65s8q2jmyzwiq1cbma7rldszs0x5j"; depends=[cli crayon dplyr forcats knitr magrittr rstudioapi tibble]; }; furrr = derive2 { name="furrr"; version="0.1.0"; sha256="1ld9aa9hydna94hgm6p91zjbfv1dz1vsgchjlpknkg6irbvkfafx"; depends=[future globals purrr rlang]; }; - fusedest = derive2 { name="fusedest"; version="1.3"; sha256="1i41bhrbdm501qs3dqh2y36mzfa5v94fqlhk625i2zwmf2ia7zas"; depends=[igraph Matrix Rcpp RcppEigen]; }; + fusedest = derive2 { name="fusedest"; version="1.3.1"; sha256="1nz5bkvn8y9f8h0ya6wblryg7bwj1vnz1vyqmd1hfr85bxfgl83c"; depends=[igraph Matrix Rcpp RcppEigen]; }; fuser = derive2 { name="fuser"; version="1.0.1"; sha256="17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; futile_any = derive2 { name="futile.any"; version="1.3.2"; sha256="09z12dlj7cnkfwnmgsjknsghirv1cry83w4a9k4d0w5a1jnlr5jg"; depends=[lambda_r]; }; @@ -7779,7 +7940,7 @@ in with self; { futile_options = derive2 { name="futile.options"; version="1.0.1"; sha256="0w15agpi88y3qkv6fl72zy2pzyplzgvnj41a4ixhg64mw1sck73s"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.4"; sha256="0zjb87brz7pkx3nq3q30y69cmcxpqqsra447p60qh7005kgr9vx4"; depends=[]; }; - future = derive2 { name="future"; version="1.14.0"; sha256="1jyv2wlmpfqbk3hw269h4xg36na3wh1kd1lxmwdb40bsv4850lqa"; depends=[digest globals listenv]; }; + future = derive2 { name="future"; version="1.15.1"; sha256="101hi8warqa0py9l6c5p98f7i9xjhx01w655z6a35jx1dhspykzd"; depends=[digest globals listenv]; }; future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.16.2"; sha256="08lh1sp0v1vagi34s218a1ygj63whkf3s9w0kyf25v64gsdavkzc"; depends=[BatchJobs future R_utils]; }; future_apply = derive2 { name="future.apply"; version="1.3.0"; sha256="0wd3bh114zkvrqlpn8gqz4ix1igr9hr8x72h2g00a7mqkfjfqx33"; depends=[future globals]; }; future_batchtools = derive2 { name="future.batchtools"; version="0.8.1"; sha256="034sgd5pcv6d4jbi21ishwz5r1ym82g1pvyv3s0sl1jsy5g55v0w"; depends=[batchtools future]; }; @@ -7789,7 +7950,7 @@ in with self; { fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; }; fuzzySim = derive2 { name="fuzzySim"; version="2.0"; sha256="00rl5npz656hwpd1ah8bgh9baqpa9z2lgxc44amm5w3pb9pqjkbs"; depends=[]; }; - fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.5"; sha256="1ifhvdzn0rs8gxqmpz8w1prxg3pxs5jqx5lh0r4i5rai49qjy3sb"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; + fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.6"; sha256="1g8vmz0srddw879prk7br535rdrgngpiyz2m0zchwahfjkn7yqz5"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.5"; sha256="1lz7zxpqn206rgk956c4z9sfj3rg66pwcyci7d3r63cbgynq1gcs"; depends=[dplyr geosphere purrr stringdist stringr tibble tidyr]; }; fuzzyreg = derive2 { name="fuzzyreg"; version="0.5.1"; sha256="19ppb1m655z3n7h4wcd5bwjciw4ynjbi883ki50mr5di3zy64n4r"; depends=[limSolve quadprog]; }; fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.3"; sha256="1kbli1m44317m95a0r34vza9p27vd9ala05jrbrdkadninwdynal"; depends=[R6 reticulate]; }; @@ -7797,12 +7958,12 @@ in with self; { fwsim = derive2 { name="fwsim"; version="0.3.4"; sha256="0fy87c1x5hihfcppv1pvk3b0pwl6ygqpka40x55gbpkgssdigb1l"; depends=[Rcpp]; }; fxregime = derive2 { name="fxregime"; version="1.0-3"; sha256="15fh8yhcba2gw2xfd0yiw5ssvbgb62l6vb28bxz71ckdyv9nsahk"; depends=[car sandwich strucchange zoo]; }; fxtract = derive2 { name="fxtract"; version="0.9.2"; sha256="0v65gdbc6xhqy1dwb6s8gp5dlz4nbsl7yr17g3pyw43znx7s5l1j"; depends=[checkmate data_table dplyr fs future_apply magrittr R6]; }; - fy = derive2 { name="fy"; version="0.1.0"; sha256="1620b2qsrryxdg49xfisf0gf0j380vkbg2nizanki2wh0rw9x7r3"; depends=[data_table fastmatch hutils]; }; + fy = derive2 { name="fy"; version="0.2.0"; sha256="0s8wqzzdd3sw5nfzap482382p252h5l0fx2bm6vi48zhg4pkgkc1"; depends=[data_table fastmatch hutils]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; g2f = derive2 { name="g2f"; version="0.2"; sha256="1jsmiv6v8ilpxg1k1npcgqa467hpyw7mzh5m8dp7bxar4j5npsp4"; depends=[KEGGREST minval sybil]; }; g3viz = derive2 { name="g3viz"; version="1.1.2"; sha256="1rra2n8b6mimwpsdpjnvpfl3hh0nv1xyzmggpz9xydilv7lybinz"; depends=[cgdsr htmlwidgets jsonlite stringr]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; - gDefrag = derive2 { name="gDefrag"; version="0.1"; sha256="1xzp12p7w4gsy88hjl1n0ylymjbm3wqypqavkb97if94mwhlfqsh"; depends=[igraph maptools rgdal rgeos sp]; }; + gDefrag = derive2 { name="gDefrag"; version="0.2"; sha256="0z2jbb53x0knxajap1f2w25s732xqy1fyayxh2mzlbhm0zf3pjjw"; depends=[igraph maptools rgdal rgeos sp]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; gMCP = derive2 { name="gMCP"; version="0.8-14"; sha256="11q2d4a352z7c0ln10mdpms1cl4bh5hqmg9avmbxw54z4i00mdvy"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; @@ -7810,7 +7971,7 @@ in with self; { gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; - gProfileR = derive2 { name="gProfileR"; version="0.6.8"; sha256="05d6y6b7vkkzp2qhs1cwlvp02djij1b28dbwxnrms08f8qi35iaj"; depends=[plyr RCurl]; }; + gProfileR = derive2 { name="gProfileR"; version="0.7.0"; sha256="1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k"; depends=[plyr RCurl]; }; gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; gRbase = derive2 { name="gRbase"; version="1.8-4.5"; sha256="01mq9c5prkb9vhpp46i369i9a66vc1knh54vk57rb9mndlr8kinv"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; @@ -7836,7 +7997,7 @@ in with self; { galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; gam = derive2 { name="gam"; version="1.16.1"; sha256="1fbldshnfy37bpqprazwp1rkyh9f67mr2krnxpl4688mqq143l40"; depends=[foreach]; }; gamCopula = derive2 { name="gamCopula"; version="0.0-5"; sha256="08dw2i7h8maymqxr882kdv5938dz08n44969fisj2zya00zsrr4y"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; - gamRR = derive2 { name="gamRR"; version="0.6.0"; sha256="0l7ql1qp3xgky82d88l143nl7l11zsj4mnkdsx10f3nmf7kykj3d"; depends=[boot mgcv]; }; + gamRR = derive2 { name="gamRR"; version="0.7.0"; sha256="0zn8921a4i1lz5wpdfbd72pqb25r12abyqw7y2w53kfhdzs57f3l"; depends=[boot mgcv]; }; gama = derive2 { name="gama"; version="1.0.3"; sha256="1k79m01r3y9am62414947zfwb1w1gh0nn48najivbjyk9i2avn9r"; depends=[ArgumentCheck cluster clusterCrit GA ggplot2 NbClust Rfast]; }; gamair = derive2 { name="gamair"; version="1.0-2"; sha256="1cjrd576l9md1jb1fc1y6iay5y49i0d8by024qsc7yik6f6mdl13"; depends=[]; }; gambin = derive2 { name="gambin"; version="2.4.1"; sha256="03n5zcwfq8g1vk5w22hw8fhqkc63zz4g9d3gdxa5g8v7v56l3dqy"; depends=[doParallel foreach gtools]; }; @@ -7847,13 +8008,13 @@ in with self; { games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamesGA = derive2 { name="gamesGA"; version="1.1.3.6"; sha256="1agvh27m5sy8psbsw9nbi39wl7cf406fl9sd9hkc14139w9drfwv"; depends=[shiny]; }; gamlr = derive2 { name="gamlr"; version="1.13-5"; sha256="0fc27b6qcm01drb7pb14wri2hlb464jig3x7sb8njwrxcqqia14n"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="5.1-4"; sha256="0v1pld56y5a9d9pi5pq1zgyr0l7k9wx57ndgrmlrv9m3dkz3dz72"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlss = derive2 { name="gamlss"; version="5.1-5"; sha256="0gcngfck0dk2rhjg0z1fnc61dqs0s049jy2rkywaf57531s2k8bc"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; gamlss_add = derive2 { name="gamlss.add"; version="5.0-1"; sha256="1agk6pfm04hf9dp5r6dvxqkj1hykx23a16q7vch2sg752z0dadgk"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="5.0-1"; sha256="1s83dgifidvc6cbrqirwlvwfzg08mlhmxxiqkbmnsy09i5j9fzd3"; depends=[gamlss gamlss_dist survival]; }; gamlss_countKinf = derive2 { name="gamlss.countKinf"; version="3.5.1"; sha256="1xalp909gxxhyhh4chlr1ssyfhydhw1w3szzbynajji98576zaqv"; depends=[gamlss gamlss_dist]; }; gamlss_data = derive2 { name="gamlss.data"; version="5.1-4"; sha256="1dgfspbmps6ipzcmw681wjdp320nm50dwsxafgrcwxndqgc7fdqd"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-4"; sha256="0zi87lgigr83l35zqq1y1g4cdq6ssjamripzz7yis74aznh6qg1l"; depends=[MASS]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-5"; sha256="1rl7hzdg5xpvaq3yyzwxhsaqzzs0qidi3ibv454fisijgv8l4vqw"; depends=[MASS]; }; gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-1"; sha256="0m091zxjm5wvhm6mzbpzkr275n3qnlb3v4099k0a1jymahk4w7vr"; depends=[gamlss gamlss_dist]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; @@ -7872,7 +8033,7 @@ in with self; { gapfill = derive2 { name="gapfill"; version="0.9.6"; sha256="0384v7capab7dbyvz6b2jvnh840z6ab3857my0h3cgsys3lhn3c5"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; - gargle = derive2 { name="gargle"; version="0.3.1"; sha256="0vqgp4w03sdyj0q96gxkybqflzzbaw84zifsbi7pxk5y08fimj2v"; depends=[fs glue httr jsonlite rlang withr]; }; + gargle = derive2 { name="gargle"; version="0.4.0"; sha256="08zhfk2sl342w35i5n2c93ayypg3z0kbl0020l3y9adqka1vazgx"; depends=[fs glue httr jsonlite rlang withr]; }; garray = derive2 { name="garray"; version="1.1.2"; sha256="0s2dgi556x9jnhafvzz4qkxdbq9dm12gsvsqd2g9iy3468fx9flq"; depends=[]; }; gaselect = derive2 { name="gaselect"; version="1.0.7"; sha256="0bivbvs8yyspqskvka1s1sr6w3k0m5kk4b66wfz9bfdygnywd6wz"; depends=[Rcpp RcppArmadillo]; }; gasfluxes = derive2 { name="gasfluxes"; version="0.4-3"; sha256="017y3d67f22r6pxpjxab634kpdcxjd5mq53h3g45cxic1jz3znym"; depends=[AICcmodavg data_table MASS sfsmisc]; }; @@ -7905,7 +8066,7 @@ in with self; { gcookbook = derive2 { name="gcookbook"; version="2.0"; sha256="11g1q187l4j31b6cdzdx5z3s14z3s09l7ynl36pzzn9j19l8cmrc"; depends=[]; }; gdalUtilities = derive2 { name="gdalUtilities"; version="1.0.0"; sha256="1z452lh1n65g78dqynnwq3rcrmm7g4jz7qr25px7qav0zi6944mf"; depends=[raster sf]; }; gdalUtils = derive2 { name="gdalUtils"; version="2.0.1.14"; sha256="0dvp1qzxxp6rjqfxpxckbfhdqanksnm4rfgsalvb5wdm5qmm02l9"; depends=[foreach R_utils raster rgdal sp]; }; - gdalcubes = derive2 { name="gdalcubes"; version="0.2.1"; sha256="0i4dpxf9wx3sd3zi9vr0crinw449y98258plallmw47zvggwhiqv"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; + gdalcubes = derive2 { name="gdalcubes"; version="0.2.3"; sha256="04wxy0w1sh1d64995m0b1ss9ly7n2dz7vdgmxgrdn07w7vhbhacx"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; }; gdimap = derive2 { name="gdimap"; version="0.1-9"; sha256="0ksbpcy739bvsiwis0pzd03zb4cvbd8d5wdf8whfn9k6mkj4x9rs"; depends=[abind colorspace geometry gridExtra gsl movMF oro_nifti rgl]; }; gdistance = derive2 { name="gdistance"; version="1.2-2"; sha256="0lqpxsg01ibkaq50qyccdhsl2sbb4kh9bcfifs1yzsg45bq27jf8"; depends=[igraph Matrix raster sp]; }; @@ -7914,9 +8075,10 @@ in with self; { gdns = derive2 { name="gdns"; version="0.3.1"; sha256="1vydl7jacldidzx1hhqang9fw8zar8wy4cgdmr9pbw22ffw2qq7s"; depends=[httr jsonlite stringi]; }; gdpc = derive2 { name="gdpc"; version="1.1.0"; sha256="1q1c9pypkb8dv6bvgizaca4p43krc52fvlvjz9l6nkpazr1qx33d"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; - gdtools = derive2 { name="gdtools"; version="0.2.0"; sha256="1mvpkp8cj30fwd4bwlz96x3cff7yzfbfz7iswmf77zl0a6122inh"; depends=[Rcpp systemfonts]; }; + gdtools = derive2 { name="gdtools"; version="0.2.1"; sha256="1aax50wyrs4336zpf247l8wmp4spab2n70msziy1ip4gbjn26wa1"; depends=[Rcpp systemfonts]; }; + gdxdt = derive2 { name="gdxdt"; version="0.1.0"; sha256="1yrjixq4srmaiy5iaprix4096yhf3ldyklgjag4kxd3l5acwap4h"; depends=[data_table]; }; gear = derive2 { name="gear"; version="0.1.4"; sha256="1wa35965fw4ga3p72z9w40pcc3jdc3fl7gdkfbwgakg7vc6f24xq"; depends=[lattice optimx sp]; }; - gee = derive2 { name="gee"; version="4.13-19"; sha256="14n2fa2jmibw5j8n4qgbl8xbxhapmx4z3zrmkbcci39k9dsyplzb"; depends=[]; }; + gee = derive2 { name="gee"; version="4.13-20"; sha256="167pzgnmj4cjc41ykps1mfwi6s7y32zxyycn5z17vn4v0pp4q0ak"; depends=[]; }; gee4 = derive2 { name="gee4"; version="0.1.0.0"; sha256="1vvzb9sc69g292zmh9djd15jgc7falypd5p7mzw6ps7mirpbnicf"; depends=[Formula Rcpp RcppArmadillo]; }; geeM = derive2 { name="geeM"; version="0.10.1"; sha256="1r9zyjv7r7r7avdqi54dvczf971frz8pgrs1a04kan5mh4ls6xpy"; depends=[Matrix]; }; geecure = derive2 { name="geecure"; version="1.0-6"; sha256="0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5"; depends=[geepack MASS Matrix survival]; }; @@ -7931,14 +8093,15 @@ in with self; { gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; gen2stage = derive2 { name="gen2stage"; version="1.0"; sha256="16xbzgkjskzm1wik3dznvwhqddrpmcgsgd372n4a67rbb46jgx6r"; depends=[clinfun]; }; - genBaRcode = derive2 { name="genBaRcode"; version="1.2.0"; sha256="1h4yyjjx7cpinbh716ha79hsmjlj5waxvrv67dz8lij0ingycdzh"; depends=[ape Biostrings dplyr futile_logger future future_apply ggnetwork ggplot2 ggraph ggseqlogo ggtree igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist VennDiagram visNetwork]; }; + gen5helper = derive2 { name="gen5helper"; version="1.0.1"; sha256="0z7hisn57md18vcfb6f44hy6zzp9dirrjyxi4x1id3mqa3mligb6"; depends=[dplyr ggplot2 minpack_lm naturalsort plyr pracma rlang tidyr]; }; + genBaRcode = derive2 { name="genBaRcode"; version="1.2.2"; sha256="0ls5xly4rrwjby04015yrs8f072fdg492bk4lj1zr2hy0z4m98jc"; depends=[ape Biostrings dplyr futile_logger future future_apply ggnetwork ggplot2 ggraph ggseqlogo ggtree igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist VennDiagram visNetwork]; }; genBart = derive2 { name="genBart"; version="1.0.1"; sha256="12z5vj41npwawz954zqkjfmg9inh063ilh7m82pn73asrxif0ay3"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; genalg = derive2 { name="genalg"; version="0.2.0"; sha256="1wzfamq8k5yhwbdx0wy1w5bks93brj0p890xxc4yqrja4w38ja3s"; depends=[]; }; genasis = derive2 { name="genasis"; version="1.0"; sha256="1r0733cc2hss3f8dp19s1ji55yp72mds7p3x1zvvpiks2r7w712p"; depends=[fitdistrplus Kendall]; }; gencve = derive2 { name="gencve"; version="0.3"; sha256="00wbmaffm7mbfv3zl6mb24w1df1a8p24girwdh3a522lw3045iwf"; depends=[C50 class e1071 glmnet lars MASS nnet plus randomForest rpart]; }; gendata = derive2 { name="gendata"; version="1.1"; sha256="1r5bhmfblhk6d31v0byhp4a0pmpri6vk697zmmx9b0hvhda7mllf"; depends=[]; }; - gender = derive2 { name="gender"; version="0.5.2"; sha256="1kd5024z9mbyiwmj7rpn7zflmpw6jsj2sz153g3ckzyhxjbc3x36"; depends=[dplyr httr jsonlite]; }; + gender = derive2 { name="gender"; version="0.5.3"; sha256="1r4w38av9qhmxbmripyn7zkk7r49qwvk8426y6g241dvilj7mxr0"; depends=[dplyr httr jsonlite]; }; genderBR = derive2 { name="genderBR"; version="1.1.0"; sha256="0j5wsbv797wc48lc65yhaqhpwqyr662460vj59x7r9p7d7m1ncd0"; depends=[dplyr httr jsonlite]; }; gendist = derive2 { name="gendist"; version="2.0"; sha256="0rs0sn1sb6j3pk2xncix04a093awlm2nw70g0rjhr7dlzmigspgb"; depends=[]; }; geneHummus = derive2 { name="geneHummus"; version="1.0.11"; sha256="1m6yyjsvmn3w87cw4da8js5vi74k5y739gxdx1yscx1n50bc3m34"; depends=[curl dplyr httr rentrez stringr]; }; @@ -7948,11 +8111,11 @@ in with self; { genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; genepop = derive2 { name="genepop"; version="1.1.3"; sha256="0qj6bjhaxq3d5n94qsrhgpy6yh2m9ldk2ch3xffl2bdg3df79jlk"; depends=[Rcpp RcppProgress stringr]; }; - generalCorr = derive2 { name="generalCorr"; version="1.1.2"; sha256="19kr8gs41lxfn2k6azz3200p3c98fhq63skx9ga3glas8cmxph0i"; depends=[meboot np psych xtable]; }; + generalCorr = derive2 { name="generalCorr"; version="1.1.5"; sha256="1kjmg9paxhpd6csia69k169qgm8s388iysrjnm4bqv9zxn21zwwg"; depends=[lattice meboot np psych xtable]; }; generalhoslem = derive2 { name="generalhoslem"; version="1.3.4"; sha256="0fmfhmdb16gf3v9h50vif4f3f6bm03qq7wplnmzyxa80jb60fcc0"; depends=[MASS reshape]; }; generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; }; generics = derive2 { name="generics"; version="0.0.2"; sha256="0xk1xhpy7gpv3pvaygzhpfdxj72zmb38pb4nscfyg2ff36vx3cvi"; depends=[]; }; - genesysr = derive2 { name="genesysr"; version="0.9.2"; sha256="1mzp52hiyh7ccqflyck96mv51f300lb2zil0ndsda2h3cnd4ibz2"; depends=[httr jsonlite]; }; + genesysr = derive2 { name="genesysr"; version="1.0.0"; sha256="05jp8z7313r5wi9a5yw7fh198l7nd2ywzwg4f23yp4kfrkkgawn5"; depends=[dplyr httr jsonlite]; }; genetics = derive2 { name="genetics"; version="1.3.8.1.2"; sha256="1v0ylnia6c44v356dsmnkx6054vcxazpzsrdh3yph5ch5vg6gjrh"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; }; genio = derive2 { name="genio"; version="1.0.10"; sha256="0l29rz9nap2rglansv8sbldhgngv04v1kdgy0zzxjzwwmsdcjrqp"; depends=[Rcpp readr tibble]; }; @@ -7973,8 +8136,9 @@ in with self; { genridge = derive2 { name="genridge"; version="0.6-6"; sha256="1hqarvd767h2vbjqfjzdr0548hxj87kv1073hfqyq5fybdlzsjx3"; depends=[car]; }; gensemble = derive2 { name="gensemble"; version="1.0.1"; sha256="03ql1qxrxixr70hs9mwiqw92qyrg9pj4046pb42g435yncw321ad"; depends=[]; }; gensphere = derive2 { name="gensphere"; version="1.1"; sha256="1xzli40fw94n89cv2qyb321csad1w9zidqc226wlifl2m44cw6f7"; depends=[geometry mvmesh rgl SimplicialCubature SphericalCubature]; }; - gensvm = derive2 { name="gensvm"; version="0.1.1"; sha256="10ym8p1i66ppjhn039wqbpm2yvmirj3pfqmqqn7iji8s1hdxds73"; depends=[]; }; - geoBayes = derive2 { name="geoBayes"; version="0.6.2"; sha256="17p8m1z8hkvvqsrsqkchc3ig4wysqng895gzpl22wjs9x7ld4a7n"; depends=[coda optimr sp]; }; + gensvm = derive2 { name="gensvm"; version="0.1.3"; sha256="1r9vd6h3divmjd73p3541mngv452v1dkxc41q7mbkd5qhy34km74"; depends=[]; }; + genvar = derive2 { name="genvar"; version="0.0.1.4"; sha256="0bnngj0ha9s12gbpjgnc0qybzylmvn9qf30avi0dssibiq1gynfx"; depends=[clubSandwich foreign Formula plm readstata13 sandwich]; }; + geoBayes = derive2 { name="geoBayes"; version="0.6.3"; sha256="153a7kp73wxm5hzzq038p3mnykhakv0c9qa8fpbjijccmbi89970"; depends=[coda optimr sp]; }; geoCount = derive2 { name="geoCount"; version="1.150120"; sha256="1kcjqls91r6p8ykn901c5p3v2lzbyainahhjpnr5c3a57v8s73ms"; depends=[Rcpp RcppArmadillo]; }; geoGAM = derive2 { name="geoGAM"; version="0.1-2"; sha256="0q09pk2npn4hjymklwfrhz2ybmjpcb6kvqkpn9l3a6cdjgk6bkmj"; depends=[grpreg MASS mboost mgcv]; }; geoR = derive2 { name="geoR"; version="1.7-5.2.1"; sha256="1fb3xm85i36q9l5lspa6fjfa82mv8fnwl30rimrlamss02ff959q"; depends=[MASS RandomFields sp splancs]; }; @@ -7991,19 +8155,20 @@ in with self; { geohashTools = derive2 { name="geohashTools"; version="0.3.0"; sha256="0lc5ib6iylbxn02bl72sh3b6j51zm3b1rnjrj5jdyjj22hm7n7sa"; depends=[]; }; geojson = derive2 { name="geojson"; version="0.3.2"; sha256="0iqf8jkqgl97a07v8ixr2pbvamwyjswqckdwl3kkxgx7bycndprv"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; geojsonR = derive2 { name="geojsonR"; version="1.0.7"; sha256="11d6rn7z2i8x4j3myzk9gkaw6y5asi92ya9lxc9cn1zv8jlsamvr"; depends=[R6 Rcpp RcppArmadillo]; }; - geojsonio = derive2 { name="geojsonio"; version="0.7.0"; sha256="1fhj4si2m60wy95badq31ip98r6wpnn20jnw7bmy2ps0103klmbz"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sf sp V8]; }; + geojsonio = derive2 { name="geojsonio"; version="0.8.0"; sha256="00gh6wq1gxnvcx5fswmjc2qxw3jjcc5kf4gdrqn7lv1lip9qm3m1"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sf sp V8]; }; geojsonlint = derive2 { name="geojsonlint"; version="0.3.0"; sha256="1ww52fg80mqwpn9rxz7qy698djjgzngp3fdhhhvixfrzl0ha810r"; depends=[crul jsonlite jsonvalidate V8]; }; geojsonsf = derive2 { name="geojsonsf"; version="1.3.0"; sha256="1wr3g4rcvv7wh0gjw5mic3msz7wgcg6ra3zai5kxbv3wq2i9hfcg"; depends=[BH curl jsonify rapidjsonr Rcpp]; }; geoknife = derive2 { name="geoknife"; version="1.6.3"; sha256="092in9wihgijhbkawzjqwfyazz22n4sc06x2gj14yvmp63x5dj36"; depends=[curl httr progress sp whisker xml2]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="2.0.0"; sha256="1lrxhgrrx12irbk9rlvyqcvzhw842c4hp9mqw7gzqcldhpc40isd"; depends=[ape data_table httr jsonlite]; }; geomerge = derive2 { name="geomerge"; version="0.3.1"; sha256="0pvyhpv4vq8mvvlybxhviq8rbazw29dgf9m0xnldaxg9r6lqdp4d"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; - geometa = derive2 { name="geometa"; version="0.6-0"; sha256="0hnzj6i4czg4n39bf2bk2m285j53ys80nnzy98gd884dr6zry2gq"; depends=[httr jsonlite R6 XML]; }; + geometa = derive2 { name="geometa"; version="0.6-1"; sha256="0q06vj2r8xyiwrkrzixv0ymvwvznk2a6i2sdmykwyzm7vw7phwkw"; depends=[httr jsonlite R6 XML]; }; + geometr = derive2 { name="geometr"; version="0.1.1"; sha256="0bh8m76273vk2hnn2d4fbr9a89av0f8fnww9lfa1v392i56zfi2z"; depends=[checkmate crayon deldir dplyr raster Rcpp rgdal rlang sf sp spatstat tibble]; }; geometry = derive2 { name="geometry"; version="0.4.4"; sha256="1mx5n5mw63nij4n6crs9165mlls4fnh1ipw5ch467rjsidgl0mg8"; depends=[linprog lpSolve magic Rcpp RcppProgress]; }; geomnet = derive2 { name="geomnet"; version="0.2.0"; sha256="0xanzx8p34bac4zcf9j69nivwhllvsrw7x70mzgl95jhg3gvv96a"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; - geomorph = derive2 { name="geomorph"; version="3.1.2"; sha256="1wd8pnpcb5zkqg39hvsw1jyw9yx66w0w5nyg114b8v3m9x41rkr9"; depends=[ape jpeg rgl RRPP]; }; + geomorph = derive2 { name="geomorph"; version="3.1.3"; sha256="12vzf5cjk2zjj4832av93jzq79bnnymrcs9yxw7illy80aavbm6b"; depends=[ape jpeg rgl RRPP]; }; geonames = derive2 { name="geonames"; version="0.999"; sha256="0yz1b7y3vwa4izrhpry4n3iwzb7y67s5p3kgnd7d29cl5pcbpmqx"; depends=[rjson]; }; - geonapi = derive2 { name="geonapi"; version="0.2-1"; sha256="1fypk4cc0q9jvn6zicc3jnxkh6f8yh1zcycy2sblvv175lbjlfzx"; depends=[geometa httr openssl R6 XML]; }; + geonapi = derive2 { name="geonapi"; version="0.3"; sha256="0ylb9cg2s8d06j0flmw434d7hbbqz6yf9di66r7bdp3rgsiypprl"; depends=[geometa httr openssl R6 XML]; }; geonetwork = derive2 { name="geonetwork"; version="0.3"; sha256="0qjnv91rcxzw44fmbgm4qpcrbj5qgz1lgmyw53imyhxgyv55awxv"; depends=[geosphere igraph rgdal sf sp]; }; geoops = derive2 { name="geoops"; version="0.2.0"; sha256="0n9n0j849jbqv6y6lqhyhddr5zfz8i9yi03gpg9862nzkvxd3c4k"; depends=[Rcpp]; }; geoparser = derive2 { name="geoparser"; version="0.1.2"; sha256="0vca4ijybqgk5dmbk0af4ykvbdkny8dm9d4frh5ikzk28hkvnlik"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; @@ -8014,6 +8179,7 @@ in with self; { geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geosed = derive2 { name="geosed"; version="0.1.1"; sha256="07j4q6sgrf83h2gi2j5qap5rifz8gimdacd3b7ld1p3b6ai6kv3r"; depends=[]; }; geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; }; + geospark = derive2 { name="geospark"; version="0.2.1"; sha256="0r5zf80lb5jmqjahv7iszz8kr0983bwnb3cgrm78fg9fs3sv1sjn"; depends=[dbplyr dplyr sparklyr]; }; geosphere = derive2 { name="geosphere"; version="1.5-10"; sha256="15xlgsmn0vwky1l13n6acdz6jn2b2na3gf6x367y3qh1f5w4zkan"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; @@ -8028,7 +8194,7 @@ in with self; { gepaf = derive2 { name="gepaf"; version="0.1.1"; sha256="0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm"; depends=[bitops]; }; germanpolls = derive2 { name="germanpolls"; version="0.2"; sha256="13ss7286sraiq6rgbbmlv3j94av26pv9016hz8hrlzvghmnkfwvh"; depends=[dplyr magrittr purrr RCurl xml2]; }; germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.3"; sha256="1hfhwprs4b582n81ardh7mah52989shq2cphci9vskwb4jbkyzwx"; depends=[broom data_table ggplot2 ggrepel minpack_lm plyr Rdpack]; }; - gert = derive2 { name="gert"; version="0.2"; sha256="1qs404afcxpm3gxra2lpqb27l4746ga1pz0n29ig0qg3kala5yrj"; depends=[askpass credentials openssl]; }; + gert = derive2 { name="gert"; version="0.3"; sha256="0caxjcdc2karsxasivkh5sasjkzlif25pw0whdjyq6zh3bvmdlkp"; depends=[askpass credentials openssl]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gestalt = derive2 { name="gestalt"; version="0.1.8"; sha256="1cb04rd3yvkd47byynrn0pq6brlsi2z2iavh4gfrwmqyvks34k51"; depends=[rlang]; }; gestate = derive2 { name="gestate"; version="1.3.2"; sha256="1fr811f4d7zc75wxdrasd91wsa5ngzzb0p73ycy6lfwpm839i28q"; depends=[doParallel foreach shiny shinythemes survival survRM2]; }; @@ -8053,7 +8219,7 @@ in with self; { ggBubbles = derive2 { name="ggBubbles"; version="0.1.4"; sha256="116rl8j0s9xwhh9jl5yj9fspkhv2zrirbx9247hhns9ngrdn4i3x"; depends=[dplyr ggplot2]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; ggExtra = derive2 { name="ggExtra"; version="0.9"; sha256="18mbi6gblqmrsciad1d2c9ngllk6mayaqj43k40hjq9ydqnvjbgj"; depends=[colourpicker ggplot2 gtable miniUI R6 scales shiny shinyjs]; }; - ggPMX = derive2 { name="ggPMX"; version="0.9.4"; sha256="11ccgklx1zdnv0klxrdyd27a848744srywijfi4j24cxg30c0yyg"; depends=[assertthat checkmate data_table GGally ggplot2 gtable knitr magrittr R6 rmarkdown stringr yaml zoo]; }; + ggPMX = derive2 { name="ggPMX"; version="0.9.8"; sha256="1cpywycmn88vvfnpaf2jddx712h3w28k9hiqnkjhg9nfm14jv6ik"; depends=[assertthat checkmate data_table GGally ggplot2 gtable knitr magrittr R6 rmarkdown stringr yaml zoo]; }; ggQC = derive2 { name="ggQC"; version="0.0.31"; sha256="1j9cs97hcj5zmqvn5rjr3gl0b9748s3pv2nb7v66dsyjdwvj7wyy"; depends=[dplyr ggplot2 tidyr]; }; ggQQunif = derive2 { name="ggQQunif"; version="0.1.5"; sha256="0vrxmqxy946mwdq0mb2m1ch41r0chrw7hcn18dr3mp10bv7pl7wj"; depends=[dplyr ggplot2 scales]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; @@ -8061,11 +8227,12 @@ in with self; { ggResidpanel = derive2 { name="ggResidpanel"; version="0.3.0"; sha256="1vsjw229pd36100ix1sgfmk5lb9b0fx3l6pxg1irsfhm2ypbg1ig"; depends=[cowplot ggplot2 MASS plotly qqplotr stringr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; ggTimeSeries = derive2 { name="ggTimeSeries"; version="1.0.1"; sha256="12gi0zfl8g3x78skpkhska8b3z1pp636shrbx33rkq0iacsipqga"; depends=[data_table ggplot2]; }; + ggVennDiagram = derive2 { name="ggVennDiagram"; version="0.3"; sha256="1jgxzb3iffhx6xyn14nldljkaangdvzrxzfkibsb6g787fgv8ng9"; depends=[dplyr ggplot2 sf VennDiagram]; }; ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; }; ggalluvial = derive2 { name="ggalluvial"; version="0.10.0"; sha256="05435i5859mi0dyahh9vgfdcqd4wjwznx9ixw1nkaqcdbv843v30"; depends=[dplyr ggplot2 lazyeval rlang tidyr tidyselect]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; - gganimate = derive2 { name="gganimate"; version="1.0.3"; sha256="0ngx4xjq0zvjf4fi433qyk8nxk1zvkimll0z6hs48y9k6b5mi4ch"; depends=[ggplot2 glue plyr progress rlang scales stringi tweenr]; }; - ggasym = derive2 { name="ggasym"; version="0.1.1"; sha256="01mx5yz2b4y4vh76gq323pf66r5a6d0x5pbdzfaiakiav3hdw9gf"; depends=[broom dplyr ggplot2 magrittr purrr rlang scales stringr tibble tidyr]; }; + gganimate = derive2 { name="gganimate"; version="1.0.4"; sha256="0z25fanxakc4vh67dnx99iygkxkpv8rjh9vlyypbwgy6rrg2mvpc"; depends=[ggplot2 glue plyr progress rlang scales stringi tweenr]; }; + ggasym = derive2 { name="ggasym"; version="0.1.2"; sha256="1nhsiamiv8dwn5cb2l7z7dzy46x6qcygxr2ncp0nqp6rnl7mh712"; depends=[broom corrr dplyr ggplot2 magrittr purrr rlang scales stringr tibble tidyr]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; @@ -8078,7 +8245,7 @@ in with self; { ggdmc = derive2 { name="ggdmc"; version="0.2.6.0"; sha256="1gncv7npl548k3zd41x2gwg5qywn5rp6zb4i7ga78sy77mvi3x92"; depends=[coda data_table ggplot2 matrixStats Rcpp RcppArmadillo]; }; gge = derive2 { name="gge"; version="1.4"; sha256="0plwk5j2n0309ghgn8r4ws3azwn7n4jb7yfykiiwwalhs3k05lsa"; depends=[nipals reshape2 rgl]; }; ggedit = derive2 { name="ggedit"; version="0.3.0"; sha256="1v9apfkm47jcqyhjrvv8ig09gz6zsss5xj5mrckfjybd5ca08rzn"; depends=[colourpicker dplyr ggplot2 magrittr miniUI plyr purrr rlang rstudioapi scales shiny shinyAce shinyBS tidyr]; }; - ggeffects = derive2 { name="ggeffects"; version="0.12.0"; sha256="0idfycjk05gyykfp9ibmhxfcjvd01ikh1dl0fb4nqw6znw3ar0xp"; depends=[dplyr insight magrittr MASS purrr rlang scales sjlabelled sjmisc]; }; + ggeffects = derive2 { name="ggeffects"; version="0.13.0"; sha256="0ryfbaav0k874kbwmhbiv7fan93dmkpaimm1iw5kryjhhs3917lb"; depends=[dplyr insight magrittr MASS purrr rlang sjlabelled sjmisc]; }; ggenealogy = derive2 { name="ggenealogy"; version="1.0.0"; sha256="1wi29f7allky84w9w2512v8gs687gvypsbd7r4vyxs24l6pfssyc"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggetho = derive2 { name="ggetho"; version="0.3.4"; sha256="05wh0qk5cbcvcfgj5wf12qqbjgl1bbwcxywc16qdby7r4h5wy0gn"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.3"; sha256="1p3hbznpsaznlk0lnjyazc130www0p5919qplg3kspng7qh8p22w"; depends=[colorspace dplyr ggplot2 rstan]; }; @@ -8086,17 +8253,18 @@ in with self; { ggfocus = derive2 { name="ggfocus"; version="0.9"; sha256="03adq3pdhlgckqc20aw6r70kdcrw0v4rmm848ivv6wkck4qyla3m"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; ggforce = derive2 { name="ggforce"; version="0.3.1"; sha256="04926cqrda6psvy2nzkkw4czwyxdp7fnxg76byp14v12kgd72lm0"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; ggformula = derive2 { name="ggformula"; version="0.9.2"; sha256="16ycabhnp78fsiv1dc63ccgh9gmpsy2683vbmq0fdzl6w3pd87sr"; depends=[ggplot2 ggstance magrittr mosaicCore rlang stringr tibble tidyr]; }; - ggfortify = derive2 { name="ggfortify"; version="0.4.7"; sha256="1wk9j0xg5hj9i1vf62qjiphv8cbsgq7y6baay3pfl3wyb2dwgci0"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.8"; sha256="191q2z7w0l4v7swjlxs2hjgbjngw2838688s7ygnj0kigsm310f3"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; gggenes = derive2 { name="gggenes"; version="0.4.0"; sha256="13hrjh80rlri8vm736p85v2jwwpck8gc5jfps1qrqcq86kv2xgkn"; depends=[ggfittext ggplot2 rlang]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; + gggibbous = derive2 { name="gggibbous"; version="0.1.0"; sha256="1g6igmj2nh4b516p1wcs1cwgzdnawvf3snxzwxjkmdc4yqbzyz24"; depends=[ggplot2 scales]; }; ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghalves = derive2 { name="gghalves"; version="0.0.1"; sha256="03s1wrfgkd55zmf3scv6kp32s3lcpbm5prnc5ndgad43zq8jyi09"; depends=[ggplot2 gtable]; }; gghighlight = derive2 { name="gghighlight"; version="0.1.0"; sha256="1mfjvfm5xbih7k7qz6x8akbqgh0b18dz9pybfgh7rbq2ppwnhpy9"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang tibble]; }; - ggimage = derive2 { name="ggimage"; version="0.2.3"; sha256="00hxl1c2l63aw66v16ybhj6j2391kmqcisk3dyahvq1gz777rarz"; depends=[ggplot2 ggplotify jsonlite magick rvcheck scales tibble]; }; + ggimage = derive2 { name="ggimage"; version="0.2.5"; sha256="158hbqlka4nqyflq0daqp829xjs0rckzj3fmwd980g23g2xk2m92"; depends=[ggplot2 ggplotify jsonlite magick rvcheck scales tibble]; }; gginference = derive2 { name="gginference"; version="0.1.0"; sha256="0dikyqryz25ikm047clkwn0ihlxa5zia2bxp71fh8ynxxvzixz3k"; depends=[ggplot2 rlang]; }; - gginnards = derive2 { name="gginnards"; version="0.0.2"; sha256="10a4mrp2sn9c1s1bjyk8h9fxd9a2qqsggpcb2spgcha37mhz8cak"; depends=[ggplot2 magrittr rlang stringr tibble]; }; - ggiraph = derive2 { name="ggiraph"; version="0.6.1"; sha256="1ir62rxnas6whqlxf7lwvsaj731mnp1ixw391gp3sb6vigh5cair"; depends=[gdtools ggplot2 htmltools htmlwidgets Rcpp xml2]; }; + gginnards = derive2 { name="gginnards"; version="0.0.3"; sha256="15ly88wjsd2fqvp483376rm2fczcbmj1s1vagb70z9z7968407xy"; depends=[ggplot2 magrittr rlang stringr tibble]; }; + ggiraph = derive2 { name="ggiraph"; version="0.7.0"; sha256="1002mf2dp7ram5yrj9qlg9rawz083k130k6bjvdidq0x800ps7b4"; depends=[gdtools ggplot2 htmltools htmlwidgets purrr Rcpp rlang uuid xml2]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.2.9"; sha256="1qmw7z10h1x6xnlpq7shafg6w2bal8ni02c07fyy9f7hm02xfnzs"; depends=[dplyr ggforce ggiraph ggplot2 magrittr mgcv mycor plyr ppcor purrr RColorBrewer reshape2 scales sjlabelled sjmisc stringr tidyr webshot ztable]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.1"; sha256="012md2m0jqfcccb933j423m3ck31v3p0pd41gjxpyg9082y7ixyj"; depends=[ggplot2 ggridges]; }; gglasso = derive2 { name="gglasso"; version="1.4"; sha256="0r4zfgkys8104iw1vzww3qid8a6dyn03x0jlgwrdvavfj86yhq54"; depends=[]; }; @@ -8108,27 +8276,30 @@ in with self; { ggmcmc = derive2 { name="ggmcmc"; version="1.3"; sha256="0p3akjbi0044nma8ynvqa42bkrgrb0jjx323k2pbrnlkq8x3ma1b"; depends=[dplyr GGally ggplot2 tidyr]; }; ggmosaic = derive2 { name="ggmosaic"; version="0.2.0"; sha256="0byhp7125r015wbbnv6fq13bx38krf11r39jx9dzbr0ci6kqzkdb"; depends=[dplyr ggplot2 plotly productplots purrr rlang tidyr]; }; ggmr = derive2 { name="ggmr"; version="0.1.1"; sha256="0941rvh7m5knlhp0m0mhm4j8spmch0pyvwhzs3bycq3vzlvzv1w7"; depends=[MASS]; }; + ggmsa = derive2 { name="ggmsa"; version="0.0.1"; sha256="1f16fvcnk0923dhzlxnq0gmq4y4qnkdzy0h0ijinqm2iy3sfy5gp"; depends=[ggplot2 ggseqlogo magrittr tidyr treeio]; }; ggmuller = derive2 { name="ggmuller"; version="0.5.4"; sha256="0y7bm9fm5i8acpy6fa903ca2r9yasky7kg2hicm4xz5ni09jm20x"; depends=[ape dplyr ggplot2]; }; ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; }; - ggnewscale = derive2 { name="ggnewscale"; version="0.3.0"; sha256="0nh5577if0qiqlksg028j4bkz058bm3qqwxm4nlqsssi4spja22f"; depends=[ggplot2 stringi]; }; + ggnewscale = derive2 { name="ggnewscale"; version="0.4.0"; sha256="0w9lykxdrifm69mr157x1hirz37ws9m5lpmxaqbfq5picqyvplsx"; depends=[ggplot2 stringi]; }; ggnormalviolin = derive2 { name="ggnormalviolin"; version="0.1.2"; sha256="1gbv2b86nznw5bs05c4ns96b8hsxkhikhcf8syl2qbbafzy8vx6y"; depends=[dplyr ggplot2 magrittr scales]; }; ggpage = derive2 { name="ggpage"; version="0.2.3"; sha256="1qi8ydq3fxb1smk0jg9z1cv2xjq8c1lsnmz8l7c61rvdbjm3710v"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tidytext]; }; ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; }; ggparliament = derive2 { name="ggparliament"; version="2.0.0"; sha256="04za4lm3lir95bgda1rzlsyil2fkac3j5f5f1pjw2samy6pjz80r"; depends=[dplyr ggplot2 rlang]; }; ggparty = derive2 { name="ggparty"; version="1.0.0"; sha256="0s6hr5p930kl3pj6ajwgwqz6yikc3l9hhzy1yn0nqc0r8pp2jyqf"; depends=[checkmate ggplot2 gtable partykit rlang survival]; }; ggperiodic = derive2 { name="ggperiodic"; version="1.0.0"; sha256="1cig715qy1kjjrn89cf505njdl2xccvjc5l0fwbqh86xgjayslxb"; depends=[data_table dplyr ggplot2 sticky tidyselect]; }; + ggplot_multistats = derive2 { name="ggplot.multistats"; version="1.0.0"; sha256="1afzfa86vc484bcwpg7m1ky03jpax584rigzgai8w06pifkmz0il"; depends=[ggplot2 hexbin rlang scales]; }; ggplot2 = derive2 { name="ggplot2"; version="3.2.1"; sha256="0mjswqiqcwm0aqxll16bx2kwa6c9km3aql87bdj4347n1ali94g3"; depends=[digest gtable lazyeval MASS mgcv reshape2 rlang scales tibble viridisLite withr]; }; ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; ggplotAssist = derive2 { name="ggplotAssist"; version="0.1.3"; sha256="1g0s1dkbrxmwqjqppagdbnx24s0nbjn09xwxix3dkfssz6drhala"; depends=[dplyr editData gcookbook ggplot2 ggthemes magrittr miniUI moonBook rstudioapi scales shiny shinyAce shinyWidgets stringr tibble tidyverse]; }; ggplotgui = derive2 { name="ggplotgui"; version="1.0.0"; sha256="1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0"; depends=[ggplot2 haven plotly RColorBrewer readr readxl shiny stringr]; }; ggplotify = derive2 { name="ggplotify"; version="0.0.4"; sha256="0nv3wdmxnc5ww9m3xlgnb0jp30j45dg33nqc6gg3y36svg8anjcg"; depends=[ggplot2 gridGraphics rvcheck]; }; - ggpmisc = derive2 { name="ggpmisc"; version="0.3.1"; sha256="1kcjdpq7xz3609prbcf3ikj87wgcq9rk1pzhb62bh885plczsfz2"; depends=[broom dplyr ggplot2 gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; + ggplotlyExtra = derive2 { name="ggplotlyExtra"; version="0.0.1"; sha256="1m2rhylpzj934gb50lxjp47rxz0kwl9i1p3n7w1rz4qi96pr5p1c"; depends=[ggplot2 plotly rlang]; }; + ggpmisc = derive2 { name="ggpmisc"; version="0.3.3"; sha256="1m5ajcy6l8gb2h2ph32ij9dgn6fqpcsf9nf5dr5gas7a15ihpcas"; depends=[broom dplyr ggplot2 gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; ggpointdensity = derive2 { name="ggpointdensity"; version="0.1.0"; sha256="0c9a14j3b0hvamqylhzldw2hjdxmfbllwahjkf3gg2rw337ld9iy"; depends=[ggplot2]; }; ggpol = derive2 { name="ggpol"; version="0.0.5"; sha256="0n54mmk9alc3bd9q3jb64xvxnszqndfwpi6h6n09gpvlrbj8mkdx"; depends=[dplyr ggplot2 gtable plyr rlang]; }; ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; - ggpubr = derive2 { name="ggpubr"; version="0.2.3"; sha256="0i81mmz4qn9yzcgfa6dhkcrx4ddlflkm2c3b40isc8all43rm8rn"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang scales tidyr]; }; + ggpubr = derive2 { name="ggpubr"; version="0.2.4"; sha256="0ln1gh3zlfx5s7zqcpvfdiksq74v1pma5kwkhc6r0riqnjjd19pf"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang scales tidyr]; }; ggpval = derive2 { name="ggpval"; version="0.2.3"; sha256="04s0pwi0pljdd8r6wnjyb3i3php6qgvpc1mdvhywcx2i2zqip2qx"; depends=[data_table ggplot2]; }; - ggquickeda = derive2 { name="ggquickeda"; version="0.1.4"; sha256="0rv7q7fvc9c9ca7w90ib9jrrk96vrkmayhv80nyymnc9ybknw59l"; depends=[colourpicker dplyr DT Formula GGally ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc lazyeval markdown plotly quantreg rlang scales shiny shinyjs stringr survival survminer table1 tidyr]; }; + ggquickeda = derive2 { name="ggquickeda"; version="0.1.5"; sha256="13kszfsxnpbkcn3lnlcmrw5a0c3ny8gv9dn4ciphl40rk7qpi26v"; depends=[colourpicker dplyr DT Formula GGally ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc lazyeval markdown plotly quantreg rlang scales shiny shinyjs stringr survival survminer table1 tidyr]; }; ggquiver = derive2 { name="ggquiver"; version="0.2.0"; sha256="1hsayqxf4brck1rx97yyprw1axc83lksgf7mn3rh8hqx4h1f5f0f"; depends=[dplyr ggplot2]; }; ggraph = derive2 { name="ggraph"; version="2.0.0"; sha256="0qj7w3af0pgmd9mil6y571jikfkln7b8csvzg6b08spwbglfy1s3"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis]; }; ggraptR = derive2 { name="ggraptR"; version="1.2"; sha256="18r70pnz7x8728lg447ds7swgk539gga9shax7rs4x56a710pf3q"; depends=[dplyr ggplot2 pacman purrr shiny]; }; @@ -8147,13 +8318,13 @@ in with self; { ggspatial = derive2 { name="ggspatial"; version="1.0.3"; sha256="0ka15qj3f0yq9nfkgk77wp490nz9ymi80918apv9zp6x39kcprj9"; depends=[abind ggplot2 plyr raster reshape2 rlang rosm scales sf tibble tidyr]; }; ggspectra = derive2 { name="ggspectra"; version="0.3.4"; sha256="18p0wfcnkgahs43j2msrm6x5h91bpi3pnwlqlckniyfixhfdlycy"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3.3"; sha256="0kdksay61hyb6612b07r84chh7a9aibjyclk3qcypvr9aang8hkh"; depends=[ggplot2 plyr rlang withr]; }; - ggstatsplot = derive2 { name="ggstatsplot"; version="0.1.2"; sha256="03gny7svwjxiylwg5g0hlymla85img2gb2il8kvkzm93k76bci0x"; depends=[broomExtra cowplot crayon dplyr forcats ggcorrplot ggExtra ggplot2 ggrepel ggsignif groupedstats insight metaBMA metafor pairwiseComparisons paletteer psych purrr rlang scales sjstats statsExpressions tibble tidyr WRS2]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.1.3"; sha256="1sia2sp929li67rfjbcgqwngxcv066939xnaz9mvk8bfxsz6qp03"; depends=[broomExtra cowplot crayon dplyr forcats ggcorrplot ggExtra ggplot2 ggrepel ggsignif groupedstats insight metaBMA metafor pairwiseComparisons paletteer parameters psych purrr rlang scales statsExpressions tibble tidyr WRS2]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; ggtern = derive2 { name="ggtern"; version="3.1.0"; sha256="1fhs5s3sxhb46abzni7cyymyknk9z7ff8fanln41pkih76s5i18j"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; ggthemes = derive2 { name="ggthemes"; version="4.2.0"; sha256="0rrkzfggc1nlda1w1lbqdycx6nawxbkac1szhvkwrqlzh6agxcsv"; depends=[ggplot2 purrr scales stringr tibble]; }; ggupset = derive2 { name="ggupset"; version="0.1.0"; sha256="157dqwc185y2nqrqka0b14im7k1yzj8swr0jaxz46xxm0qgqk8cc"; depends=[ggplot2 gtable rlang scales tibble]; }; ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; - ggvis = derive2 { name="ggvis"; version="0.4.4"; sha256="1bxggjr2313kfy895j0fvrv4bg7yh2z87907lk48i1kn5c9flchk"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; + ggvis = derive2 { name="ggvis"; version="0.4.5"; sha256="091i9f17912j8qcyxppjgwzjnyqj7769ixs9d2gjg6f2clskqdw2"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.3"; sha256="04dv33vnip0rrli1diq43v7vhr86bmxjdyxjbxz5x4371kbb312j"; depends=[deldir ggplot2 raster rgeos sp]; }; ggwordcloud = derive2 { name="ggwordcloud"; version="0.5.0"; sha256="0mr92738s3j9wm6mkr5hd2flqsqw3vfjifv3fajsygysbwrl8dn8"; depends=[colorspace ggplot2 png Rcpp scales]; }; gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; }; @@ -8163,15 +8334,15 @@ in with self; { gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; gifski = derive2 { name="gifski"; version="0.8.6"; sha256="00w4bzp0rrp4isy1rnxs6g1q07r3wndadk3mqdrxk2wxi7jmghna"; depends=[]; }; gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; }; - gim = derive2 { name="gim"; version="0.11.0"; sha256="1psmziq03k1nbdl64sy152ih4g625qkbp5l7msfibrcbpgz0hg7y"; depends=[numDeriv]; }; + gim = derive2 { name="gim"; version="0.28.0"; sha256="1m9pb3dcphyjmadxr87lrd4fb2jacrx2mmcgrvqzc16gfm66n6d5"; depends=[numDeriv]; }; gimme = derive2 { name="gimme"; version="0.6-1"; sha256="1ipak83ma1fl24snsd7xlbbhgv67m03r3g8xh9rhvmr6ajag7ada"; depends=[data_tree igraph imputeTS lavaan MIIVsem qgraph]; }; gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; gimms = derive2 { name="gimms"; version="1.1.1"; sha256="06vq0apsadyfgnz7906v2kjy0nx3yn0agq4yschxz1r1zmgrnyki"; depends=[curl Kendall ncdf4 raster RCurl zyp]; }; giphyr = derive2 { name="giphyr"; version="0.2.0"; sha256="0273f7lama8bhaalafs66m6ksp32vx0j6rmh1qr4484i7wkmdfqn"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; gistr = derive2 { name="gistr"; version="0.4.2"; sha256="0bh325pf37v307isdlvdglripfki8xr6gh7n8mgi4cjparzhrh23"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; git2r = derive2 { name="git2r"; version="0.26.1"; sha256="0dbl845sahv2i641ncaf06w06djravwc5wknp9syzx0ad8l0kmhk"; depends=[]; }; - git2rdata = derive2 { name="git2rdata"; version="0.1"; sha256="1nq9pxvxk05xqsknwyfx30r7gzidl0whqiix56mbgy6zi3ma2pvj"; depends=[assertthat git2r yaml]; }; - gitgadget = derive2 { name="gitgadget"; version="0.4.4"; sha256="03p9ci5lbgh7avn4w9wy50d61yc6m0n1d97vsk62lia1xrnyhvyv"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; + git2rdata = derive2 { name="git2rdata"; version="0.2.0"; sha256="1hzvr1h6rbqqf69xkjc1c2x3c5wqp8za40yim7vd7sb398f1iq4q"; depends=[assertthat git2r yaml]; }; + gitgadget = derive2 { name="gitgadget"; version="0.5.2"; sha256="0la0x3p50wk5wv2p4vkf3rh72psz3k18lcymxn354nqb7m1xdggs"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; }; gitignore = derive2 { name="gitignore"; version="0.1.3"; sha256="0ckvl5i99k9sjvlk3cfjyclhmchrlqdz4379nmlckh4jpmnckzk0"; depends=[clipr clisymbols crayon curl glue here jsonlite purrr xfun]; }; gitlabr = derive2 { name="gitlabr"; version="1.1.6"; sha256="1p68w0q8mjpz2hr6ys1qbfw1y4b35hgs27kzfkzv9hfi1vxqfd1h"; depends=[arpr base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; @@ -8183,7 +8354,7 @@ in with self; { gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; }; - glancedata = derive2 { name="glancedata"; version="1.0.0"; sha256="0v72zpf6njg90dggdvw7sqvpcq26izdx334yid8cfk2hidmj5a2k"; depends=[dplyr forcats GGally ggplot2 gridExtra openxlsx purrr tibble tidyr]; }; + glancedata = derive2 { name="glancedata"; version="1.0.1"; sha256="01j7syjn33pc7hq032nmyak38wn35yv3n7is9g2ggs14kj3xqb0c"; depends=[dplyr forcats GGally ggplot2 gridExtra openxlsx purrr tibble tidyr]; }; glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; }; glassdoor = derive2 { name="glassdoor"; version="0.8.1"; sha256="0r85k1fyk8979ahfmd4vmzkhyvrlnpkgjwg1yi7092kpx8877lj0"; depends=[httr]; }; glasso = derive2 { name="glasso"; version="1.11"; sha256="02p3612rpydk195n2qr77lp1j2w8zsw1ckkk98c8angm4r5q8dsc"; depends=[]; }; @@ -8204,24 +8375,25 @@ in with self; { glmc = derive2 { name="glmc"; version="0.3-1"; sha256="0x6jk2l5rpjkp5x815gpiwv8maa7mhmy6m8gaxbv1cbn3zyccynn"; depends=[emplik]; }; glmdisc = derive2 { name="glmdisc"; version="0.2"; sha256="0f5bn307xvq1n9zvw6y8324v6i89vh2bam8z6s0q581xyzpbvmlg"; depends=[caret gam MASS nnet Rcpp RcppEigen RcppNumerical]; }; glmdm = derive2 { name="glmdm"; version="2.60"; sha256="09vljki24fccqkvxkmg2i6a8pxqhfwm155b41m2q51lqaq29bfw7"; depends=[]; }; - glmertree = derive2 { name="glmertree"; version="0.1-2"; sha256="0p498kg873m7g90a05ki2zbki61f3ppnv874p79hlnm24hricasa"; depends=[Formula lme4 partykit]; }; + glmertree = derive2 { name="glmertree"; version="0.2-0"; sha256="0lfn6dap38i6cnfy4gdap13aq81h9cm3bip7ci57q9br9b00x7ib"; depends=[Formula lme4 partykit]; }; glmgraph = derive2 { name="glmgraph"; version="1.0.3"; sha256="16sq6i7kbw20nvwikpa02z3pb7wqw3270j6ss7f8sgf548skhmx0"; depends=[Rcpp RcppArmadillo]; }; glmlep = derive2 { name="glmlep"; version="0.2"; sha256="0rq2vxbr732r725pn8qdvppxcrhjhyvlr550svfgy1inq985c1w4"; depends=[]; }; glmm = derive2 { name="glmm"; version="1.3.0"; sha256="088m626c2f75ij457mskdyi927y6g01m5rgfsjaxpm7xbywk51sw"; depends=[doParallel foreach itertools Matrix mvtnorm trust]; }; - glmmEP = derive2 { name="glmmEP"; version="1.0-2"; sha256="0j7i1pgykrxyb1z8c7pl1i2w02ypmn0r324p5wcqlxvas3w5bva5"; depends=[lme4 matrixcalc]; }; + glmmEP = derive2 { name="glmmEP"; version="1.0-3.1"; sha256="0fql85m0mxn58jh3mgrcw56bb4dx7amrz39ngqrljwi5pv5i7aj4"; depends=[lme4 matrixcalc]; }; glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.1.0"; sha256="121iclp86nfm9mybvfwascs937i0z2mbv982hn894q6g7jkqiw1l"; depends=[]; }; glmmTMB = derive2 { name="glmmTMB"; version="0.2.3"; sha256="035hkywa37bz555fv6znxd4hfcs5w884365wfnwk4jx5vann4vvb"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; glmmboot = derive2 { name="glmmboot"; version="0.4.0"; sha256="1n25175nxmgirs41nhavrjgfqnl74hn63nxi6rdjbk40ngj0aq78"; depends=[]; }; glmmfields = derive2 { name="glmmfields"; version="0.1.3"; sha256="1sygppwm58hvwj95nlyz59cjlnkrq82kpws6izbivl7p6wb06lil"; depends=[assertthat BH broom cluster dplyr forcats ggplot2 loo mvtnorm nlme Rcpp RcppEigen reshape2 rstan rstantools StanHeaders]; }; glmmsr = derive2 { name="glmmsr"; version="0.2.3"; sha256="1fbg5zji0xjr9q1yc6phsp37nsrj7nfs8yiri0j9s84wzgwjili1"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; - glmnet = derive2 { name="glmnet"; version="2.0-18"; sha256="0sr5akaiaab1sdh9c8gfmc4kp9b4vqhd90d9ig0rqpqhp3bykp78"; depends=[foreach Matrix]; }; - glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.2"; sha256="0zb8gfrkc06q3vyj2n919hdd5sbnnqigbjmrns01cc4ysjj8a6ha"; depends=[glmnet Matrix]; }; + glmnet = derive2 { name="glmnet"; version="3.0-1"; sha256="04wa926mnss53p1fhx0mjgxnmwmmqls12sc0sy7w09kbmyqa3fq7"; depends=[foreach Matrix shape]; }; + glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.3"; sha256="1n89810vs8fx0vack2gzsy04dqnvg6klnms5zljb7ajg4rsq1vrl"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.4"; sha256="1fizw48lwhdyzfdmhl1hhcv7pfjf2zm8b96m2hcwm1ckvshf5j76"; depends=[glmnet]; }; glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; glmpathcr = derive2 { name="glmpathcr"; version="1.0.7"; sha256="18i0ivvxyirgbp5qjc2av1wanang9pbjimwva448ighad7m2dsqr"; depends=[glmpath]; }; glmpca = derive2 { name="glmpca"; version="0.1.0"; sha256="19fiivv72nnz4cax5nibcpzm47vma54h3myxcb9bhz3rm04b5srv"; depends=[]; }; glmtlp = derive2 { name="glmtlp"; version="1.1"; sha256="01kyw0xipyr9z7x9z41wz7rqargzqd8s8ri34ffdvd3ggrdznl0p"; depends=[glmnet]; }; + glmtree = derive2 { name="glmtree"; version="0.1"; sha256="03baxmabfpyl89a5dqk16fhvcgw58daji3fkqc35yy6hzsiwg04q"; depends=[caret dplyr magrittr partykit]; }; glmulti = derive2 { name="glmulti"; version="1.0.7.1"; sha256="0ph47c3f1bqljmj2jdaaydqf0vhn5rld9257sn4x6jicy550l6r2"; depends=[rJava]; }; glmvsd = derive2 { name="glmvsd"; version="1.4"; sha256="03axsn85axs4d6fdlr3wcdwq6qa4991svkqc7k9r52kk1ar0w5zz"; depends=[brglm glmnet MASS ncvreg]; }; glmx = derive2 { name="glmx"; version="0.1-1"; sha256="06v2qxgr16w0qnfhjr9vdqcad5v475pwg2yhw0i236yzqbnsssh6"; depends=[Formula lmtest MASS sandwich]; }; @@ -8234,6 +8406,7 @@ in with self; { glpkAPI = derive2 { name="glpkAPI"; version="1.3.1"; sha256="06p8zvmshymcw994mmf1ar00kfj645z8dp18yy4i5bl6qydbpb8k"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; glue = derive2 { name="glue"; version="1.3.1"; sha256="1a1ycg9r3gd91visp49q49rsrdgyf8kr9dxdy3hk99kikn4z5hag"; depends=[]; }; + gluedown = derive2 { name="gluedown"; version="1.0.0"; sha256="1a2jzi5508bd9zp83jh5w164iqw58xnzk16icd845l061qbnjvcw"; depends=[glue knitr markdown stringr]; }; gluvarpro = derive2 { name="gluvarpro"; version="1.0"; sha256="0knqn4cz14j5hq2w2s71aj8girf68a7v10w5jy0r04zvl4xlr3y7"; depends=[ggplot2 pracma scales tidyr zoo]; }; gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; @@ -8262,14 +8435,13 @@ in with self; { gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goffda = derive2 { name="goffda"; version="0.0.5"; sha256="1766fzk32072pq2m12bq0kyh1n6a7ij2j2j76jmqp8l3zkj722ha"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; goft = derive2 { name="goft"; version="1.3.4"; sha256="15n1av7r6w8hihxlgw9pd570qgrlcprkkacln15chvjs3b0i60la"; depends=[fitdistrplus]; }; - goftest = derive2 { name="goftest"; version="1.1-1"; sha256="183imn6dy28ama8bywxgyh32vgakv7bsbz4k5qbhnlhqdvzv2v6v"; depends=[]; }; - goftte = derive2 { name="goftte"; version="1.0.5"; sha256="0mqibs8kpj8qq3wpnlpfdzxx33q77clwli1q7yaxllwzbq0b99hw"; depends=[survival]; }; + goftest = derive2 { name="goftest"; version="1.2-2"; sha256="0ivnkqhv5xgiv05dm648nngacymd8x8g0fyppv3bc0mhcqk9k5z4"; depends=[]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; golem = derive2 { name="golem"; version="0.1"; sha256="06nn0a3l4zxjz732wsglyqjgz39frzn8dcr2k39h7b37vkwwkk2m"; depends=[attempt cli crayon desc dockerfiler DT glue htmltools pkgload processx remotes rlang roxygen2 rsconnect rstudioapi shiny stringr testthat usethis yesno]; }; gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; }; goodpractice = derive2 { name="goodpractice"; version="1.0.2"; sha256="08rnm8z0pry5mwpc7p37r6f2rd56dry9djpcvvs9yl170w56psx0"; depends=[clisymbols covr crayon cyclocomp desc jsonlite lintr praise rcmdcheck rstudioapi whoami withr xml2 xmlparsedata]; }; - googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.7.0"; sha256="1rh5aywrfhr32hvwscn2vvwvamnn8cf9572009rzr6ni736v2a5h"; depends=[assertthat dplyr googleAuthR httr jsonlite magrittr memoise purrr rlang tibble tidyr]; }; + googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="0.7.1"; sha256="1px57a5kqmnlny11p0niak6096pz1q8jvd9xbyld99hrwicav13r"; depends=[assertthat dplyr googleAuthR httr jsonlite magrittr memoise purrr rlang tibble tidyr]; }; googleAuthR = derive2 { name="googleAuthR"; version="1.1.1"; sha256="053s6n28cq35gn18ywipygw3bpwsi1qv6rr4vv2bi9q6sy6rb8q3"; depends=[assertthat digest gargle httr jsonlite memoise rlang]; }; googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.5.1"; sha256="0sd6ca1ksv22avr5rcvkf5089f9igb8gqa83kidlc4xklaj6g92m"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; googleCloudVisionR = derive2 { name="googleCloudVisionR"; version="0.1.0"; sha256="1n7lbqx7qiahmirydli9nvq4w4i26qnyk3s2kxy4aj413619ym67"; depends=[caTools data_table googleAuthR jsonlite purrr]; }; @@ -8284,32 +8456,33 @@ in with self; { googlenlp = derive2 { name="googlenlp"; version="0.2.0"; sha256="0d0g18i3im2s5f14k69ym3vwf9a7zkaval3nwrip97xcl6kf4x9h"; depends=[dplyr httr jsonlite purrr readr rlang]; }; googler = derive2 { name="googler"; version="0.0.1"; sha256="1aayji3ncqxl58k29d93dbx05s9rp9bc63fl2cpl1cys7gilblxx"; depends=[jsonlite tibble]; }; googlesheets = derive2 { name="googlesheets"; version="0.3.0"; sha256="11q07nxys72wkxx9mawmjyf20gvwvrb7h3gpa73h6lgh2vgrwnv8"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tibble tidyr xml2]; }; + googlesheets4 = derive2 { name="googlesheets4"; version="0.1.0"; sha256="1n12s92cbn6cnnkm629brdkghvj0r8x7rz191c0lbdfd8mgbw1pw"; depends=[cellranger curl gargle glue googledrive httr magrittr purrr rematch2 rlang tibble]; }; googleway = derive2 { name="googleway"; version="2.7.1"; sha256="0axpr81p3gdp1nmfn000lk288sdn8z5qmzjvagdxqn5j44hq6sj1"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr scales shiny viridisLite]; }; goric = derive2 { name="goric"; version="1.1-0"; sha256="1smjq9vljszgngs5i6x55jwg0imzc5gsfdqxzcs4541fp3pvk999"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; + govdown = derive2 { name="govdown"; version="0.7.0"; sha256="0vp43bhb23cnasdizk5h6qzczk0zr1hxn7s8k5m8iskvcpfx0gn0"; depends=[rmarkdown]; }; gower = derive2 { name="gower"; version="0.2.1"; sha256="007ivwn1nagpi26qq8iih1c2l61c53glvv60n90hi341ry8vwgxg"; depends=[]; }; gpDDE = derive2 { name="gpDDE"; version="0.8.2"; sha256="100g2f8zlpbwxb46h62pgvidll8aflz1zl4inyh8dml6vhm9pilp"; depends=[CollocInfer deSolve fda forecast lars limSolve MASS nnls penalized trustOptim TSA]; }; gpairs = derive2 { name="gpairs"; version="1.2"; sha256="09mkdbs9hklxnmqcsnf65s3dfsfcr7kppp6zxj08v5hxym1gpz3l"; depends=[barcode colorspace lattice MASS vcd]; }; gpclib = derive2 { name="gpclib"; version="1.5-5"; sha256="08j81b8wymsgin20n54gvm6m54rmdic51p6qzs9cz4pmgl7dkkjv"; depends=[]; }; - gpg = derive2 { name="gpg"; version="1.2.1"; sha256="0m6pn9ssjy74gg4nr7lg2csfkp5m9fwp3bk72vld5als2knzj90c"; depends=[askpass curl]; }; + gpg = derive2 { name="gpg"; version="1.2.2"; sha256="1qc7w4d6frp0j4yk0q7slkj1mps80bv78lixcpw1shgx48rp41kh"; depends=[askpass curl]; }; gpk = derive2 { name="gpk"; version="1.0"; sha256="1zfhkqyypb24mhbj2zi9qy3gw0kqxvlp8j5ni3zm7k5rz1bnrygg"; depends=[]; }; gplm = derive2 { name="gplm"; version="0.7-4"; sha256="0apvj14nl5qbi4dhhdx5nih5lvjwfcipvr8cyk6xsz4r5gfr2iw4"; depends=[AER]; }; gplots = derive2 { name="gplots"; version="3.0.1.1"; sha256="033plcfs9w8pmn84n24mdhiixdirc2a7pz6dvm61fpd20gwh7cbx"; depends=[caTools gdata gtools KernSmooth]; }; gpmap = derive2 { name="gpmap"; version="0.1.1"; sha256="00jhslbxbp6dgq7bw346hfpw0gans048vsn7chyzjhyr7ah5xrfg"; depends=[foreach ggplot2 isotone plyr]; }; gppm = derive2 { name="gppm"; version="0.2.0"; sha256="1n9is3xj52lsck2fiy9j320p2ca6ib36s251i7g3iz99a77b0ahh"; depends=[ggplot2 ggthemes MASS mvtnorm Rcpp rstan]; }; gpr = derive2 { name="gpr"; version="1.1"; sha256="03ywik11kc6cnaqrzzzi94jkrdbd378m3sf26f2vpb7d834nl728"; depends=[]; }; - gprofiler2 = derive2 { name="gprofiler2"; version="0.1.6"; sha256="0dx3dcfjwkxncgd86as3xrw2a3q07bfahigsdyqi2rjrg3ydqbgz"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly plyr RCurl tidyr viridisLite]; }; + gprofiler2 = derive2 { name="gprofiler2"; version="0.1.7"; sha256="19qfmk2w7bzycw8nw7np2f8j1wd5dr6bpbivxzzmnnp5zc1nmkiv"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly plyr RCurl tidyr viridisLite]; }; gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; }; gpuR = derive2 { name="gpuR"; version="2.0.3"; sha256="1afbnrnk0hrsd3qa7gh269wxn1maq7dpi6wpjhhbp2gwr6100vqy"; depends=[assertive BH Rcpp RcppEigen RViennaCL]; }; - gqlr = derive2 { name="gqlr"; version="0.0.1"; sha256="0qvyvy514ma5wi2qm6a8praqa7js9wl0hh0ack1hknw33g2gyqhy"; depends=[graphql jsonlite magrittr pryr R6]; }; + gqlr = derive2 { name="gqlr"; version="0.0.2"; sha256="0gzhqyrbnz3qjzkr4slryrlfhlaxm474y9fahlj0sb0hvcx68pxj"; depends=[graphql jsonlite magrittr pryr R6]; }; gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; }; - grImport = derive2 { name="grImport"; version="0.9-2"; sha256="0n3y6dzy8s0ifvyrgwbly6cl14lmgd54dyi74s5i984apszpsp16"; depends=[XML]; }; - grImport2 = derive2 { name="grImport2"; version="0.1-5"; sha256="0dyb3nrrvxnkk9q5b136bdivcz1jj3ajx1kscm3k0kkpqjif0pls"; depends=[base64enc jpeg png XML]; }; + grImport = derive2 { name="grImport"; version="0.9-3"; sha256="109mrdvq06xq3zgn9ngz0c7zzgqkv5zbpvsb2i636vmlk6y4dpkd"; depends=[XML]; }; + grImport2 = derive2 { name="grImport2"; version="0.2-0"; sha256="19q0dd8fpp1g4xf6sg5f8dxybwxjfw553ra6wgjd8b74fzca40m1"; depends=[base64enc jpeg png XML]; }; gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; - gradeR = derive2 { name="gradeR"; version="1.0.3"; sha256="1hk2kjrd5r3gsfkv83x86727rdzzqn0h4cy81falnz8lakkwcgml"; depends=[testthat]; }; + gradeR = derive2 { name="gradeR"; version="1.0.5"; sha256="1c7x16z1mn7ys63vdwpy8b2x21k35pbmnpl52h372pfrsvxxhb23"; depends=[testthat]; }; gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; }; - grainchanger = derive2 { name="grainchanger"; version="0.2.0"; sha256="00gxzzl47kpghwzz22z5b1m1gcpsfg5pay3hcdwdqr00mz2albg2"; depends=[checkmate furrr raster sf usethis]; }; grainscape = derive2 { name="grainscape"; version="0.4.0"; sha256="1i5bc1a0rh2grvd4xls2iz428jxspjrk038hm37cn2n0h88yx1xl"; depends=[ggplot2 igraph raster Rcpp rgdal sp]; }; gramEvol = derive2 { name="gramEvol"; version="2.1-3"; sha256="0z2511zhs2gcdkwp29n6fpafhn49h69yi56nmrhh9zc8jqj1rwpa"; depends=[]; }; grangers = derive2 { name="grangers"; version="0.1.0"; sha256="15q8hv7p5g5m7v6lx6nq5394fa6p05xgawnsrn1v5aslmmbbzyvl"; depends=[tseries vars]; }; @@ -8320,16 +8493,18 @@ in with self; { graphTweets = derive2 { name="graphTweets"; version="0.5.2"; sha256="1rizfabd3j3n5ddzg6c2a4jy4jnbdpy2zv8k09jqrxjkg1cvl5m0"; depends=[combinat dplyr igraph magrittr purrr rlang rtweet tidyr zeallot]; }; grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; }; graphframes = derive2 { name="graphframes"; version="0.1.2"; sha256="1bv7d0sggwab4rd486ayw9gkb5ja5p5fin5pn92xnrmz8cgwsfxq"; depends=[forge sparklyr tibble]; }; + graphicalExtremes = derive2 { name="graphicalExtremes"; version="0.1.0"; sha256="1cc4xcb72yci2gq2zn3g1nh3ba802anpymm0hajdbz3kb0wz1gyn"; depends=[igraph matrixcalc mvtnorm Rdpack]; }; graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.2"; sha256="1jzhqbdylpzc8d28vz2k34i9dpxx5x34bgvx73z8wjglnn6j27b8"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; graphkernels = derive2 { name="graphkernels"; version="1.6"; sha256="1gn3ihqz7m0rdvvc2fp7hsgq583wh5cnz7200a2ff89xc04zs3dc"; depends=[igraph Rcpp RcppEigen]; }; graphlayouts = derive2 { name="graphlayouts"; version="0.5.0"; sha256="03dizbhhdhnzbj2i5zvqgs617kwcv4h2pha4f16adic0fph1rxl3"; depends=[igraph Rcpp RcppArmadillo]; }; - graphon = derive2 { name="graphon"; version="0.3.2"; sha256="0bh542ffxklydb826srnacmw3cncd8cxnkj76r40mbkaxq7vxxlp"; depends=[Rdpack ROptSpace]; }; + graphon = derive2 { name="graphon"; version="0.3.3"; sha256="1jsjbyk1hbmdlgap3gaf1cdrrbgfccr4lgpdi7g3bzp3mjjbijh5"; depends=[Rdpack ROptSpace]; }; graphql = derive2 { name="graphql"; version="1.5"; sha256="0zi1l93yk5rlgdy4j2nph14w0h8kgvnbzk9fi2jfys8s3fz54ksr"; depends=[jsonlite Rcpp]; }; graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; gratia = derive2 { name="gratia"; version="0.2-8"; sha256="1diijk4s0x29aq7l8bjx5canjykj9xlsr7rajvj0jjxx7i9jaw56"; depends=[cowplot dplyr ggplot2 mgcv mvtnorm tibble tidyr]; }; graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; - grattan = derive2 { name="grattan"; version="1.7.1.2"; sha256="1dmy6shigybp3g7kjqc9f2c28niw9if7igi1xmc8qnf0azlnlrlz"; depends=[assertthat data_table fastmatch forecast hutils ineq magrittr Rcpp rsdmx zoo]; }; + grattan = derive2 { name="grattan"; version="1.8.0.0"; sha256="1604hrbh897hdgxg2ack4c47xzqlgwgy4nn96lyc2sk3qvw0l7s7"; depends=[assertthat data_table fastmatch forecast fy hutils ineq magrittr Rcpp rsdmx zoo]; }; + gravitas = derive2 { name="gravitas"; version="0.1.0"; sha256="0w53rz6ips5cl2xigb16ffskjdnlx98f20slkpvdh4s2vwvbvk74"; depends=[dplyr ggplot2 ggridges ineq lubridate lvplot magrittr RColorBrewer rlang shiny stringr tibble tidyr tsibble]; }; gravity = derive2 { name="gravity"; version="0.9.8"; sha256="1yx71gidv3ivjfip994ciaiwk2cvvm8z16yax4lwpwgl1fxj1p4k"; depends=[censReg dplyr glm2 lmtest magrittr MASS multiwayvcov purrr Rdpack rlang sandwich survival tibble tidyr]; }; grec = derive2 { name="grec"; version="1.3.0"; sha256="0fksxzjnm843wbcwjf06gcbbw4lfz7zk361bj6qdpnkcfcl22c1w"; depends=[imagine raster]; }; greenclust = derive2 { name="greenclust"; version="1.0.0"; sha256="1qqlg40bzi088vn4yx33izf12jsviyqj63a24xw2426lg4lif3kv"; depends=[]; }; @@ -8339,9 +8514,9 @@ in with self; { greta = derive2 { name="greta"; version="0.3.1"; sha256="0wy1619drj8ir6r44xcliiirgibksd80gmjx21am2h580k0x0xq2"; depends=[coda future progress R6 reticulate tensorflow]; }; gretel = derive2 { name="gretel"; version="0.0.1"; sha256="1yyj4aing56f2vy0gshxwb623g9idg8k4701v3s53lqn4m2ybazk"; depends=[Rcpp ResistorArray]; }; grex = derive2 { name="grex"; version="1.9"; sha256="0s6nan76rrmh3yhgvzb7pqdrzx2w9px8ay4v9yiib4bamy9wmhpb"; depends=[]; }; - greybox = derive2 { name="greybox"; version="0.5.5"; sha256="0kqi02jb7wvmgi4k98iz0bygy47hislkmm03vdwj3m2gh10fbcpz"; depends=[forecast lamW nloptr numDeriv Rcpp]; }; + greybox = derive2 { name="greybox"; version="0.5.6"; sha256="1m52sr7alil9s9aai22wk5x1qdm3lach5i8wpf9z2dy72jh2hw6i"; depends=[forecast lamW nloptr numDeriv Rcpp]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="0.10.4"; sha256="1nlrmvx1awd0zhbanw8p86xsdawza807hxiqxsdh3ydspcwh43x3"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; + grf = derive2 { name="grf"; version="1.0.0"; sha256="0igiiwf8myifivp933q6glpadlbldqpfwi29s58mcd5dhiyyn4yh"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridBezier = derive2 { name="gridBezier"; version="1.1-1"; sha256="1n5d6svxblcxpzf79px0qjxsydpwjpnfcagnwk35ljinyd0wv68z"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; @@ -8349,7 +8524,7 @@ in with self; { gridGeometry = derive2 { name="gridGeometry"; version="0.2-0"; sha256="0y7y1ld03cqpibmjssid6n3n8gf98hi9ngcfbkh6acyzck812bc7"; depends=[polyclip]; }; gridGraphics = derive2 { name="gridGraphics"; version="0.4-1"; sha256="1kr3p54bkv2q7agxrva30y9bkwkiq1k2cfl5z1kvyjv6f5xi4w5p"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; - gridSVG = derive2 { name="gridSVG"; version="1.7-0"; sha256="0wdjj6jyk1zflglhimjzhws51ifwz3yb044j5nfsynn6kjdgfn32"; depends=[jsonlite XML]; }; + gridSVG = derive2 { name="gridSVG"; version="1.7-1"; sha256="03ra820lm0gydrvxmck658aaj3mqqkqrinxc134r5npl8bv4x2hg"; depends=[jsonlite XML]; }; gridsample = derive2 { name="gridsample"; version="0.2.1"; sha256="062aryy26x07m31r6m0fj1zgnjhivlh1fikx9lv2rdgk0rh4yzz0"; depends=[data_table geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; gripp = derive2 { name="gripp"; version="0.2.20"; sha256="0rshipm8rdynl19a4dsvvvlhkd0n4vjfkidwnv5iilc5ini7c4qr"; depends=[GA GenSA usethis]; }; @@ -8360,8 +8535,8 @@ in with self; { groupRemMap = derive2 { name="groupRemMap"; version="0.1-0"; sha256="1bfp746j0dx7kk44nyjqmimvgw14par9ayvqxnzldc05qsazjdwx"; depends=[]; }; groupdata2 = derive2 { name="groupdata2"; version="1.1.2"; sha256="0v206sq4h50v1scb2i8qwwi3kxiqamxwrnn1gblwk9i3xkmqs48y"; depends=[dplyr numbers plyr rlang tibble]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; - groupedSurv = derive2 { name="groupedSurv"; version="1.0.3"; sha256="15ah8v1mfyq9xi27kkl0vwwbhf16vd4hy9h809jlw1i7b1zwg4pm"; depends=[BH doParallel doRNG foreach qvalue Rcpp RcppEigen]; }; - groupedstats = derive2 { name="groupedstats"; version="0.0.9"; sha256="0x2dz25prk21vm0a8z1jvjqy19ncv6q6rkwd6akxv68p120pyj21"; depends=[broomExtra crayon dplyr glue lme4 magrittr purrr rlang robust rstudioapi sjstats skimr tibble tidyr]; }; + groupedSurv = derive2 { name="groupedSurv"; version="1.0.4"; sha256="106z47icn680nyzj9gkq7g8gv73ajgmx0ypiv4l1j01cd3nripj2"; depends=[BH doParallel doRNG foreach qvalue Rcpp RcppEigen]; }; + groupedstats = derive2 { name="groupedstats"; version="0.1.0"; sha256="1a517qxwbzxwilwqblvp0i8bwap1cgzvnmys4ab10c77npy9jl3z"; depends=[broomExtra dplyr glue lme4 parameters purrr rlang robust rstudioapi sjlabelled sjstats skimr tibble tidyr]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; growfunctions = derive2 { name="growfunctions"; version="0.14"; sha256="1pvyiw20fxm3l4giyq4iizc67yy36i6wq4ch2qyqg4mfd4bki2g4"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; @@ -8384,6 +8559,7 @@ in with self; { gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-4"; sha256="1ay3iamnvg7mbnl1xaxxcyic559bdnfspy883w2bwgy20yhr34yg"; depends=[MASS]; }; gsbDesign = derive2 { name="gsbDesign"; version="1.00"; sha256="1kbwlpxbr70aagx9jkap9xlw13r1k3y630b08wmmny421sv4zhxl"; depends=[gsDesign lattice]; }; + gscaLCA = derive2 { name="gscaLCA"; version="0.0.2"; sha256="0s6rnyd632xq04pnyq1j3571qv7j5bzxir2nhk5jk9i8myf9fc9k"; depends=[devtools doSNOW fastDummies fclust foreach ggplot2 gridExtra MASS progress psych stringr]; }; gscounts = derive2 { name="gscounts"; version="0.1-3"; sha256="1xcsvnam858l9am30mmqb6m0vcflijhli22ix8g56rcvfsh208q1"; depends=[Rcpp]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; gsg = derive2 { name="gsg"; version="2.0"; sha256="17fjl7aw1s814krnszxd4y1d4210bnkrf4kb2fwsycqwcwms5pm7"; depends=[boot mgcv mvtnorm numDeriv]; }; @@ -8394,7 +8570,6 @@ in with self; { gsmoothr = derive2 { name="gsmoothr"; version="0.1.7"; sha256="00z9852vn5pj04dhl3w36yk0xjawniay6iifw1i7fd8g98mgspxp"; depends=[]; }; gsrsb = derive2 { name="gsrsb"; version="1.1.1"; sha256="0yjxzc69ihsx5ni6jb4shsvl9vskqlls3gmpckmzx5nsh1l5s5vb"; depends=[ldbounds mvtnorm xtable]; }; gss = derive2 { name="gss"; version="2.1-10"; sha256="1qhywsn9244fc7ir705xc8s832ygd7w0j72k3d58bdx9wv57xi16"; depends=[]; }; - gsscopu = derive2 { name="gsscopu"; version="0.9-3"; sha256="0bvhhs5wn4y1dcff2g87f80jdn3i4mdbvdbydsbx80ng38rfxhhg"; depends=[gss]; }; gstar = derive2 { name="gstar"; version="0.1.0"; sha256="1582f7jcphb32j3wdc345qa5sgm2xyimlc6r5r5jay7ca5ll8c98"; depends=[dplyr ggplot2 reshape2 xts zoo]; }; gstat = derive2 { name="gstat"; version="2.0-3"; sha256="1qfcg8zb3hlpcb6x6z2hdn08g0d9z7fkn9yyi1c1l8l9pzk3za90"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; @@ -8410,7 +8585,7 @@ in with self; { gtools = derive2 { name="gtools"; version="3.8.1"; sha256="0f5syk1qq6cjq6hwymvkiyhzwa389z94722v881ipbfqkd2q8505"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; gtrendsR = derive2 { name="gtrendsR"; version="1.4.4"; sha256="0b05m5jbgbhdjmwp89zaa276z1h2qib2h30msg69lhwbdcsva96q"; depends=[anytime curl ggplot2 jsonlite]; }; - gtsummary = derive2 { name="gtsummary"; version="1.2.1"; sha256="1ckcnng2768j0kmibgcdl34h7ss7ydycxlc6b3dvpvrq01wqahnk"; depends=[broom broom_mixed crayon dplyr glue knitr magrittr purrr rlang stringr survival tibble tidyr tidyselect]; }; + gtsummary = derive2 { name="gtsummary"; version="1.2.3"; sha256="0mpr94l2hx3zvcgk1scbjl2080500lmhb6zdf83i0j41dqhd2k3k"; depends=[broom broom_mixed crayon dplyr glue knitr lifecycle magrittr purrr rlang stringr survival tibble tidyr tidyselect usethis]; }; gtx = derive2 { name="gtx"; version="0.0.8"; sha256="0x71jji2yldi9wpx8d3nldbjfj4930j7zcasayzbylf9094gmg26"; depends=[survival]; }; guardianapi = derive2 { name="guardianapi"; version="0.1.1"; sha256="17xmmr6pfzhdnmf45jzvk84gbfnmlw1qfv1gqjaw85vgm8b6jn6l"; depends=[dplyr httr jsonlite rlang tibble]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; @@ -8429,26 +8604,27 @@ in with self; { gwfa = derive2 { name="gwfa"; version="0.0.4"; sha256="0jz82d9lfyd07z0jjlfqzsg7a3vnyz0s1j0rrb5sg9pnvcfjk9qy"; depends=[Rcpp sp]; }; gwrpvr = derive2 { name="gwrpvr"; version="1.0"; sha256="0x15nv2pfv99c04lgs6q6hgczarld34xc4aqw9bn179m7j02v6m3"; depends=[]; }; gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; + gwsem = derive2 { name="gwsem"; version="0.1.5"; sha256="0pzizjhxfxq73xq0kh5sj8v637iz4wqfv5cm9jxd2laid7fqgnb1"; depends=[BH data_table OpenMx]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; h2o = derive2 { name="h2o"; version="3.26.0.2"; sha256="1ldjk1gm6jb5zvk2rmlfah4zm827dpmj4c5q83ysd4arwqqz5gna"; depends=[jsonlite RCurl]; }; h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; h5 = derive2 { name="h5"; version="0.9.9"; sha256="14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"; depends=[Rcpp]; }; - hBayesDM = derive2 { name="hBayesDM"; version="1.0.1"; sha256="0f1w21xgbkdmk72zlfb2vyv53fv4zsdnkqr9sj0cmj83rkh5nhcq"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; + hBayesDM = derive2 { name="hBayesDM"; version="1.0.2"; sha256="04p4d0hy2l6bmxyh2k5q0g19b7fbpsl9frmcvrf5rxkaasxyxwn6"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; hIRT = derive2 { name="hIRT"; version="0.2.0"; sha256="1vgmr36dbcn2ah9pzhc46zh1va7y7w3zr4mpmyf626m1bq0alb39"; depends=[pryr rms]; }; hNMF = derive2 { name="hNMF"; version="0.9"; sha256="0qavavgiqah4dv0gz8v5ssz637sd341n9s0pyc232n2jhqpzl0cz"; depends=[MASS NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; - hR = derive2 { name="hR"; version="0.2.0"; sha256="1rh411g6as52l9y54y922fdmrisx7j98835n80y1czymk7ba2whh"; depends=[data_table data_tree knitr rhandsontable shiny]; }; + hR = derive2 { name="hR"; version="0.2.1"; sha256="1y0rzcrxb21fhxnpvhijxg0syhj8n20882cy79g5x4rv4xrngw1z"; depends=[data_table data_tree knitr rhandsontable shiny]; }; hSDM = derive2 { name="hSDM"; version="1.4.1"; sha256="1jwqjzr0zpckzh2jpqh17v6ypq4mzn5khlv6p37y59zz8bh9mvxp"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; hablar = derive2 { name="hablar"; version="0.2.0"; sha256="0242gqcjh04kgv1zf9idm4v2vrxm1vm8nvwhcl3mf08w9a8la2aw"; depends=[dplyr]; }; - hagis = derive2 { name="hagis"; version="3.0.0"; sha256="0kryzv26f79wsg68nhh4y1yqp6958gmrg5cqdxmy7gps3w3vq12d"; depends=[data_table ggplot2 pander]; }; + hagis = derive2 { name="hagis"; version="3.0.1"; sha256="1bljpva3j7x87hdmy8s9sh37r5vd8wkjzjqbk57akl654x6b0gfv"; depends=[data_table ggplot2 pander]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; halfcircle = derive2 { name="halfcircle"; version="0.1.0"; sha256="1gbqbv3cn8w09i3f2ji3qq0snb4fy9243y12agw686fx46dfmhxs"; depends=[scales]; }; hamlet = derive2 { name="hamlet"; version="0.9.6"; sha256="076fh28grlrv38qywshi79m84jsz1ck9k4n0rg4svvr3gqkdbcn2"; depends=[]; }; handlr = derive2 { name="handlr"; version="0.2.0"; sha256="1p14q9swvy8yvd52wcms777vfcb9vandi0pd4cmqmyz1hpsi31d8"; depends=[crul jsonlite mime RefManageR urltools xml2]; }; handyplots = derive2 { name="handyplots"; version="1.1.3"; sha256="0pcl0iichdw2lkv8y00mv6n6c0rvrnsk75ka5lwm2g7b64pphsvk"; depends=[]; }; hans = derive2 { name="hans"; version="0.1"; sha256="0hh2nlzxs2kj93yb7yfm873m6nymjw5qmkin3qqn3acza6dr0k6q"; depends=[Rcpp]; }; - hansard = derive2 { name="hansard"; version="0.7.1"; sha256="10xx8dfgpgggyv9h0ywvzqh4v620ln8whjlm6flcz1fy8ipf4274"; depends=[dplyr jsonlite lubridate snakecase tibble tidyr]; }; + hansard = derive2 { name="hansard"; version="0.8.0"; sha256="00mcy58nhlphb0v0wchbaw1qamm0435s09nxxw6rr5z872rhyf5a"; depends=[dplyr jsonlite lubridate snakecase tibble tidyr]; }; hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; haplo_stats = derive2 { name="haplo.stats"; version="1.7.9"; sha256="19kxascqq5qz0zdxx0w837ji207y1z2ggxkl4vmlbay03k2dw2mx"; depends=[rms]; }; haploR = derive2 { name="haploR"; version="3.0.1"; sha256="162wqjpmgapy54n8msrw5apgzj586ps0kkc5wmbqay3l94xgnvzk"; depends=[DT httr plyr RCurl RUnit tibble XML]; }; @@ -8467,10 +8643,11 @@ in with self; { hashmap = derive2 { name="hashmap"; version="0.2.2"; sha256="1qypmyi033rjxjk055rv94qfqa99gm5hj5gfd9fiiq1xln3z700j"; depends=[BH Rcpp]; }; hashr = derive2 { name="hashr"; version="0.1.0"; sha256="1ri2zz2l1rrc1qmpqamzw21d9y06c7yb3wr60izw81l8z4mmyc3a"; depends=[]; }; hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; }; - haven = derive2 { name="haven"; version="2.1.1"; sha256="12h64r2v2451igyl7v4w2kg0hzw9rnanph0m7smffq29ybkv9g4h"; depends=[forcats hms Rcpp readr tibble]; }; + haven = derive2 { name="haven"; version="2.2.0"; sha256="0g9d6mxqmrw2zdms78jpx2sx73pczlyy771v1h5hmxqz9sqyk7hr"; depends=[forcats hms Rcpp readr rlang tibble tidyselect]; }; hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; }; hazer = derive2 { name="hazer"; version="1.1.1"; sha256="1d1qj6mamgxlvxq2hjik69zfzackjz5819iss98jf5gdbdngw41x"; depends=[]; }; hazus = derive2 { name="hazus"; version="0.1"; sha256="1c0ahjdy9di1683nk5k4rmr6rhb66523ny039nyv842rgqdy625j"; depends=[reshape2]; }; + hbbr = derive2 { name="hbbr"; version="1.1.2"; sha256="09sph4vliyb63pd0abq02ix5wz373r70kgldw44fm279zq4z772h"; depends=[R2jags]; }; hbim = derive2 { name="hbim"; version="1.0.3"; sha256="1480nydsi2xj7zbfk4zw24mhsjadf83d827kpqzbmn0yh6srp3ps"; depends=[mvtnorm]; }; hbm = derive2 { name="hbm"; version="1.0"; sha256="0qz28azm91a6pbss1mfc47a21d3q9rs3mmw0kgwc7i2a2m43mysm"; depends=[doParallel foreach Matrix]; }; hbmem = derive2 { name="hbmem"; version="0.3-3"; sha256="1rajd5h9gp0rrpc0q0m0fx37mv2n70da3gnfvvnjc5a77mzfyqkp"; depends=[]; }; @@ -8484,16 +8661,17 @@ in with self; { hda = derive2 { name="hda"; version="0.2-14"; sha256="0azfxyws7yslcqplfddmdp5ngk91j5h7llvrg77yh5z0kkd09j1b"; depends=[e1071]; }; hdbinseg = derive2 { name="hdbinseg"; version="1.0.1"; sha256="0fy9cqrygsnxkb3nxg56md19svrvkbijpxkqfk9p18cj5ibwrq94"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; hdbm = derive2 { name="hdbm"; version="0.9.0"; sha256="0lvaica195chl6bb10wvvr7fbmh8b954fpxcm9r0gyp0d0i2a2w4"; depends=[Rcpp RcppArmadillo]; }; + hdd = derive2 { name="hdd"; version="0.1.0"; sha256="0hnqjfp78s8fiabibf0dl57sj170ri1ysf7pyrk45z4qsnizbyn2"; depends=[data_table fst readr]; }; hddplot = derive2 { name="hddplot"; version="0.59"; sha256="18llkpawm12cjxlcrlra60m16virfpjqiaqkvy9mb3wq1zif61rh"; depends=[MASS multtest]; }; hddtools = derive2 { name="hddtools"; version="0.8.2"; sha256="02gbqlzwxc77gllgz9sf2s73y4ngyb4warabdfyj2sm2g7jl6y12"; depends=[gdata Hmisc raster RCurl rgdal rnrfa sp stringr tibble XML zoo]; }; - hdf5r = derive2 { name="hdf5r"; version="1.2.0"; sha256="10gynjwaaxks8y9c2fl8k040j0nbwn372nil70009yfk9wrkx0aq"; depends=[bit64 R6]; }; + hdf5r = derive2 { name="hdf5r"; version="1.3.0"; sha256="1pq12vkfqxvcaznwaxvjdg3acimk5a20m8h18sixvxc34vnqxw8f"; depends=[bit64 R6]; }; hdfqlr = derive2 { name="hdfqlr"; version="0.6-1"; sha256="1z8sylaaki8ab9k7m4hp3530rnkxjh39zvw4n962fw5fb9a11dx3"; depends=[]; }; hdi = derive2 { name="hdi"; version="0.1-7"; sha256="1q58bvlqh59hv3vb3dw92r0w1nwyifnqm5ccss54fzmf2gjsj1cj"; depends=[glmnet linprog MASS scalreg]; }; hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; hdm = derive2 { name="hdm"; version="0.3.1"; sha256="1kibfc1fc94y1vk06nn0yfvpdzcm30a1jn89lqqfma70x5jpa25s"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; - hdme = derive2 { name="hdme"; version="0.3.1"; sha256="12q1drgss9avm5z7nwsl1rdqgy63hi942d4wcwv27i50ah8yhwdr"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; + hdme = derive2 { name="hdme"; version="0.3.2"; sha256="01qpb194nxpfxhlwyd2p8cga9zypp000sjhpbzands660g224j84"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; hdnom = derive2 { name="hdnom"; version="6.0.0"; sha256="0wszxxfz5xkyqd3xgc9g3d5iwwsfkq9517bgp416h6l31ynxxrwn"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized survAUC survival]; }; - hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; }; + hdpca = derive2 { name="hdpca"; version="1.1.3"; sha256="09h96wm6r6w1imkm4k9bg5l0vcq2yvbp6iqx786x99ds8jzppsb9"; depends=[boot lpSolve]; }; hdrcde = derive2 { name="hdrcde"; version="3.3"; sha256="0c2qbw4c3mq1cb068kjs72rxlbibz8svwcrx853jyr8ybs23z7ab"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; healthcareai = derive2 { name="healthcareai"; version="2.3.0"; sha256="0lyx9fldw28gx2lr2cpi7lyrwf5qz549v2vqxjx83ih5kxm6mlnp"; depends=[caret cowplot data_table dbplyr dplyr e1071 forcats generics ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; @@ -8503,10 +8681,10 @@ in with self; { heatmap3 = derive2 { name="heatmap3"; version="1.1.6"; sha256="13aa9rd16k67b1fr6471bdz2a1i04k7279ck1i4rjdly9rbksnjx"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; heatmaply = derive2 { name="heatmaply"; version="0.16.0"; sha256="1qhxk48qh61qjxdlhl0qffdh3yh8iiwccid5ssngdv433q0cmyc1"; depends=[assertthat colorspace dendextend ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; - heatwaveR = derive2 { name="heatwaveR"; version="0.4.1"; sha256="1dqqk3mjqlz60h54zfryqqcf11ikmja7fnf6s7wphld765am7ll8"; depends=[data_table dplyr ggplot2 lubridate plotly Rcpp RcppArmadillo RcppRoll tibble zoo]; }; - heavy = derive2 { name="heavy"; version="0.38.19"; sha256="15bg2qqkslkqfnsq3ixbgmq72xagh8laji0265l06xgf2l6045kx"; depends=[]; }; + heatwaveR = derive2 { name="heatwaveR"; version="0.4.2"; sha256="1fp38vlb4646jg397gsxmf5ws15grmmg6hdzijwll5zsg6a9xhg4"; depends=[data_table dplyr ggplot2 lubridate plotly Rcpp RcppArmadillo RcppRoll tibble zoo]; }; + heavy = derive2 { name="heavy"; version="0.38.196"; sha256="05k788ynw9fhhmjydzp8dbk1vhl44j2rz2shqwn02i40jmwdvwrk"; depends=[]; }; hedgehog = derive2 { name="hedgehog"; version="0.1"; sha256="1mvjnm2zlc4pvw9vnhxr0dj1g1sfqvlrnnhcipzfbvr147yan9l5"; depends=[rlang testthat]; }; - heemod = derive2 { name="heemod"; version="0.10.0"; sha256="0vkmjsi8dya6zyhh6bxisvwaydk6w2q9k31gkbkvwjcjrv09dnnv"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr tibble]; }; + heemod = derive2 { name="heemod"; version="0.11.0"; sha256="0zzjq4cmyr25p4x91jw542jiqmds6qikbp8gyix34dcmk765drnk"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr rlang tibble]; }; heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; helixvis = derive2 { name="helixvis"; version="1.0.1"; sha256="113rnpnrcnw18ks78fgq79zdrw3kmpzpimlc45gvj0za2fbyci3p"; depends=[ggforce ggplot2 rlang]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; @@ -8515,20 +8693,21 @@ in with self; { helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; heplots = derive2 { name="heplots"; version="1.3-5"; sha256="1vyhfkp66gi17jni3gsbv9kn1s0n00qigr13q8xbzbgylz5jjiln"; depends=[car MASS]; }; here = derive2 { name="here"; version="0.1"; sha256="1vb5dxqdpimy51q1gjsypyq14p2hhvj7wsvh6g35pj1g03cyg9av"; depends=[rprojroot]; }; - hergm = derive2 { name="hergm"; version="4.1-4"; sha256="16nxarmn1syx8k0ijmqg41r0h5sciwsavpbiq7wfp2wysh8irwsk"; depends=[ergm igraph intergraph latentnet Matrix mcgibbsit mlergm network Rcpp sna stringr]; }; + hereR = derive2 { name="hereR"; version="0.2.0"; sha256="0ki819gds0mndq56bxdyv91qkbm9i7iqsb63ipmy4w9sd1smx1ml"; depends=[curl data_table jsonlite lwgeom sf stringr]; }; + hergm = derive2 { name="hergm"; version="4.1-5"; sha256="0i75jcr63gbivwz680d5wrbz01nwlklfg5h8zqvk2r16vbpwl8ag"; depends=[ergm igraph intergraph latentnet Matrix mcgibbsit mlergm network Rcpp sna stringr]; }; heritability = derive2 { name="heritability"; version="1.2"; sha256="18snrfsjj5jw5qicj92d5qch9v4ciqw1hbiwg6q8kfjka9nmqpma"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; hero = derive2 { name="hero"; version="0.0.3"; sha256="166jqxlp2x459ixm83kw55ssd86041qiwfymsk035r5aaf7nvjq1"; depends=[]; }; - hesim = derive2 { name="hesim"; version="0.2.1"; sha256="1b8hsdyk88kpf6d1dkxg8zmp7qkfdbm2w6rkspkjam0034d2ni6q"; depends=[data_table flexsurv MASS R6 Rcpp RcppArmadillo survival]; }; + hesim = derive2 { name="hesim"; version="0.2.2"; sha256="1wchccw9761iz0sk5sd8ahdzpphrd4k9rmgg8f9cgp43aza68ic2"; depends=[data_table flexsurv MASS R6 Rcpp RcppArmadillo survival]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; - hetGP = derive2 { name="hetGP"; version="1.1.1"; sha256="1f0lb91hb6lp9cfil1qpbqf032xv697jazcqyc1y694hdbx0jwqj"; depends=[DiceDesign MASS Rcpp]; }; + hetGP = derive2 { name="hetGP"; version="1.1.2"; sha256="0r7hzw6ccyrqpq51adljd2ljv9dl00c0dr8frjrhibpzpc68z3sz"; depends=[DiceDesign MASS Rcpp]; }; hett = derive2 { name="hett"; version="0.3-2"; sha256="1kmspw0738pdall5scmllsa79dynliai2glk1h5rzm4030r5rd6j"; depends=[lattice MASS]; }; hettx = derive2 { name="hettx"; version="0.1.1"; sha256="0zfxg88l83pzj37c5khpv4vi0v28fdnp0p8yz39scm8d8lya1dkm"; depends=[doParallel dplyr foreach formula_tools MASS moments mvtnorm plyr purrr quantreg tidyverse]; }; heuristica = derive2 { name="heuristica"; version="1.0.2"; sha256="1wqdwggnma6p667ivr0xja4vvn3jgzbkc5whkkijmdmxpjzg1wz6"; depends=[Hmisc]; }; heuristicsmineR = derive2 { name="heuristicsmineR"; version="0.2.1"; sha256="0zpkkz20jlppdvsxcxs0w2n79af21ry1vvmbqlm1scgkr86674yd"; depends=[BH bupaR data_table DiagrammeR dplyr ggplot2 ggthemes magrittr petrinetR processmapR purrr Rcpp rlang scales tidyr]; }; hexSticker = derive2 { name="hexSticker"; version="0.4.6"; sha256="02zdnxnhci0d9dclb6z3zc8sm1c4bj8zzbapwy34h8bs3sz1c8xn"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; }; hexView = derive2 { name="hexView"; version="0.3-4"; sha256="01hiqyibsd4as7jcklzg09pl12la341mg561vn16z4jzdarfvkfc"; depends=[]; }; - hexbin = derive2 { name="hexbin"; version="1.27.3"; sha256="14f181lw6sj5xhfxbrpyyinsjfl0nzqilq6z80lgrhj2cnkj593y"; depends=[lattice]; }; + hexbin = derive2 { name="hexbin"; version="1.28.0"; sha256="0b58jb1kz39wzrnkv077cfzns889xly7psvhxnm3xmnx6yvd986d"; depends=[lattice]; }; hextri = derive2 { name="hextri"; version="0.6"; sha256="05rvigi225npncbr1brc6apc7gsg9a5jzcbmhvflwp3hbcg3hn02"; depends=[FNN hexbin]; }; hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hgam = derive2 { name="hgam"; version="0.1-2"; sha256="1flcc67n8kbh9m5phdfl587xg1x935zbp305y0gdmkc8vpkiwpcf"; depends=[grplasso lattice rgl]; }; @@ -8555,12 +8734,13 @@ in with self; { highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; highcharter = derive2 { name="highcharter"; version="0.7.0"; sha256="0qfv25dqr7l54jq3vrnwphsj7wzk0an3vfx1zik36wi05yf2w8br"; depends=[assertthat broom crosstalk dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlang rlist stringr tibble tidyr whisker xts yaml zoo]; }; highfrequency = derive2 { name="highfrequency"; version="0.6.1"; sha256="0531kvsd06h684kksci63vyl865hiiic624fqdqicf0sis2bd1sd"; depends=[cubature data_table lubridate mvtnorm Rcpp RcppArmadillo RcppRoll readr robustbase xts zoo]; }; - highlight = derive2 { name="highlight"; version="0.4.7.2"; sha256="0xc1akglgby3qd6c9y2rhcd0gpfihx5jvakji38vzlxb1m21sn10"; depends=[]; }; + highlight = derive2 { name="highlight"; version="0.4.7.3"; sha256="0zzq9c1rb6j7rgb4943k64khgz554jrc5caqzji0ia7x9wbksd92"; depends=[]; }; highlightHTML = derive2 { name="highlightHTML"; version="0.2.1"; sha256="06k2idx9aadjd6xp6kadm9jh7ap1hwg7vh0bc8vw9ll82wcp1nv1"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; highr = derive2 { name="highr"; version="0.8"; sha256="0my6idnhmmgs4q1vs40y2lh56yij2p59mpwvm53wjs2zk6x1zl2b"; depends=[]; }; highriskzone = derive2 { name="highriskzone"; version="1.4.5"; sha256="09ad025ydpfsrkcfqsfm4cj6lk8shrdh6vyya7isqwrd5jfyf1qc"; depends=[deldir fields ks maps Matrix mvtnorm rgeos spatstat]; }; higrad = derive2 { name="higrad"; version="0.1.0"; sha256="0q9av8qyvmvgy6a3l7svcmbkjjgnp4iny1cld4g3qsbaz3yp3jaj"; depends=[Matrix]; }; + hilbertSimilarity = derive2 { name="hilbertSimilarity"; version="0.4.3"; sha256="1251df3q7c7c69f8q9y9bxj210bk2dh80c8ca4s58isf0hr2x7zp"; depends=[entropy Rcpp]; }; hillR = derive2 { name="hillR"; version="0.4.0"; sha256="0wivagbn4clfm3vbxbl3p93d9yxms94gkvi7p15lh0jfdppzm4c9"; depends=[ade4 ape FD plyr tibble]; }; hilldiv = derive2 { name="hilldiv"; version="1.5.1"; sha256="1jp4xvrpqd575y2x0i73s0bq708bzi6gdhqgz85bia6d5kf05lq9"; depends=[ape data_table FSA geiger ggplot2 ggpubr qgraph RColorBrewer scales vegan]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; @@ -8580,12 +8760,12 @@ in with self; { hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; }; hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; }; hmeasure = derive2 { name="hmeasure"; version="1.0-2"; sha256="0l4nlny532kddiaa1nmgd37971whhwzb54mb1pvbwax7fsg6hmhw"; depends=[]; }; - hmi = derive2 { name="hmi"; version="0.9.16"; sha256="128rwbflxy9j49xpgmwjsw35jhsz586r5b0hn80jkjmpfshnffx3"; depends=[boot coda linLIR lme4 MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm rlang tmvtnorm VGAM]; }; + hmi = derive2 { name="hmi"; version="0.9.17"; sha256="08cppa061xn13lyp7d9jsybn0cc6k2ffml79m5bp7fk11gzq18mb"; depends=[boot coda linLIR lme4 MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm rlang tmvtnorm VGAM]; }; hmlasso = derive2 { name="hmlasso"; version="0.0.1"; sha256="0ydcyz9pw30ji8ghrvkgcbmp27d661vajl97b8cwis52605a3gfx"; depends=[BH MASS Matrix Rcpp RSpectra]; }; hmm_discnp = derive2 { name="hmm.discnp"; version="2.1-11"; sha256="0s0qzwg5lidmzcxgdbjnq6dqal8xm28h75drrjm712pg36577fcg"; depends=[nnet]; }; hmmhdd = derive2 { name="hmmhdd"; version="1.0"; sha256="16jz951d1ssai0gmfnnfikkkvc8yca29a82dq7092kbzwc4i90sk"; depends=[gmfd mvtnorm roahd]; }; hmmm = derive2 { name="hmmm"; version="1.0-4"; sha256="1sbr85lcmcw3lv0ygqwfbarr91dp3br1xnlygy49145cvl93nfci"; depends=[MASS mvtnorm nleqslv quadprog]; }; - hms = derive2 { name="hms"; version="0.5.1"; sha256="1v4cxfpvp85la4gqla6b4q2bwx4jv1fxqwndcnjsibbnybz6wcvd"; depends=[pkgconfig rlang vctrs]; }; + hms = derive2 { name="hms"; version="0.5.2"; sha256="0h24dsagn4kcr65arn73mpqapcg002kw4kyxfqyff95j6s6cjifl"; depends=[pkgconfig rlang vctrs]; }; hmstimer = derive2 { name="hmstimer"; version="0.0.2"; sha256="0qv2pls6mplnv3mylbiwh83gnvq2qkdpnnjnxnhrgmwia9fapixs"; depends=[]; }; hnp = derive2 { name="hnp"; version="1.2-6"; sha256="12cbc353ipr2rcc93skf1766g38j1pvpdkqk3cswv0cxsjl2x7pl"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4.1"; sha256="152vz6cddphmxvm7vi6f3b7jjpib0nsb6qv2k1wrmfrpvv3hgsxx"; depends=[statmod survival]; }; @@ -8596,12 +8776,12 @@ in with self; { holodeck = derive2 { name="holodeck"; version="0.2.0"; sha256="1p7crpwa56a4363x4c888475xajga3blp544as4ad85br1k8vpjl"; depends=[assertthat dplyr MASS purrr rlang tibble]; }; homals = derive2 { name="homals"; version="1.0-8"; sha256="0gad0jmflw5zmzf9hk5qqmxxpbncm9gngsi24i3rgiz7565kli1r"; depends=[ape rgl scatterplot3d]; }; homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; }; - hommel = derive2 { name="hommel"; version="1.4"; sha256="1bzall7xfg4fyjx9i4ck24yfdp5s9gwcm2324y75a4hc088wpspl"; depends=[Rcpp]; }; + hommel = derive2 { name="hommel"; version="1.5"; sha256="15c5az35zwmj6g0pxycfr4jnlc5ykllly0xk8gbdv7yk5m23my6d"; depends=[Rcpp]; }; homologene = derive2 { name="homologene"; version="1.4.68.19.3.27"; sha256="0d7wxisk0vqk1n165v1i19bc02zv78h5r5d3jqai5y6nkmwn01sh"; depends=[dplyr magrittr purrr R_utils readr]; }; homomorpheR = derive2 { name="homomorpheR"; version="0.2-2"; sha256="1iahq16nswlc3b87598206xdp24bg9v8acyjp1jivybl3fr4k3pq"; depends=[gmp R6 sodium]; }; homtest = derive2 { name="homtest"; version="1.0-5"; sha256="1lnqlg3dwq174ic6dbjllysw5fjy5kvvgbl6gvabjmcs66z27fp0"; depends=[]; }; hopbyhop = derive2 { name="hopbyhop"; version="3.41"; sha256="1dh502mjrk9dlqikn0ak4gh2dw9nrnp3zrz8j1xwa9cjn37al2wh"; depends=[ggplot2 pastecs]; }; - hopit = derive2 { name="hopit"; version="0.9.0"; sha256="177kg6gqf76qhjlm259g8if0n4345mv0xxk6vi4qy5c64zx29arg"; depends=[MASS Matrix Rcpp RcppEigen Rdpack survey]; }; + hopit = derive2 { name="hopit"; version="0.10.2"; sha256="0iphvadn5shqlnk01xbz1vx13q453pkrs0nk1k5r1bmm2mr36kj1"; depends=[MASS Matrix Rcpp RcppEigen Rdpack survey]; }; horizon = derive2 { name="horizon"; version="1.2"; sha256="0b8m9ghfabjgdl155wh4gc4ng2lsvyfyhsy62pldbcix757b4ck9"; depends=[raster]; }; hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; horserule = derive2 { name="horserule"; version="1.0.0"; sha256="0d348pn0ld7lr9lfl1z05905l9kl296j0xic1pib6r5l1c5600r9"; depends=[gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer Rdpack]; }; @@ -8631,8 +8811,8 @@ in with self; { htmlTable = derive2 { name="htmlTable"; version="1.13.2"; sha256="0h6jslchlx1dzqqdb70c3n9xlapcym9ykycvr0hc4q3450y8qmvh"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; }; htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.5.0"; sha256="1djkjff3750fm1sp54kf9cjvsqz2x7ia1ns12h5vqqcvwzfd0701"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; - htmltools = derive2 { name="htmltools"; version="0.3.6"; sha256="18k8r1s8sz1jy7dkz35n69wj20xhmllr53xmwb4pdzf2z61gpbs4"; depends=[digest Rcpp]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="1.3"; sha256="04jsdh14l2zifbjpbbh23w7bxz1wpsas0zb2gy2zwv4yqamzzr7i"; depends=[htmltools jsonlite yaml]; }; + htmltools = derive2 { name="htmltools"; version="0.4.0"; sha256="06l17d8jkf438yk2mchpsp4j90bynnapz3nabh5vkcc324p5a62v"; depends=[digest Rcpp rlang]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="1.5.1"; sha256="10fp306l1nybkah6jrlrqwwdb6zvklbddp8i3w9v9naj8la5jbnl"; depends=[htmltools jsonlite yaml]; }; htree = derive2 { name="htree"; version="2.0.0"; sha256="15bi5c2p4aghihp3k12s78447j2x9hbsaq56b5lc8jmd1vf0jdwb"; depends=[]; }; hts = derive2 { name="hts"; version="5.1.5"; sha256="0mvsxrk7wkfn81hbk8a80fckiqiwdbvhq42k7c6lm69gamnbak2f"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; httk = derive2 { name="httk"; version="1.10.1"; sha256="05zbxyxlq94i6v4wwx7znr9p4k5gn9z7yi818v9f76bv8xi7mxv2"; depends=[data_table deSolve magrittr msm mvtnorm survey truncnorm]; }; @@ -8643,18 +8823,18 @@ in with self; { httptest = derive2 { name="httptest"; version="3.2.2"; sha256="1q2lhqi5lhdc15wjrcr4z2yxjrfhjkgn0wwxr0mawsfz8cy3703q"; depends=[digest httr jsonlite testthat]; }; httpuv = derive2 { name="httpuv"; version="1.5.2"; sha256="13ax0hs2lc39ilznh1zarwqdzahcbhb8adilrfik3xg0fkljpcwk"; depends=[BH later promises R6 Rcpp]; }; httr = derive2 { name="httr"; version="1.4.1"; sha256="0mp1il13q6n49n2hv1p2p8x6avjan6dr5az19ql4hb78pc3pwp37"; depends=[curl jsonlite mime openssl R6]; }; - hues = derive2 { name="hues"; version="0.1"; sha256="0b6y4ld242fqzx4ccxzk4i4zbx7myk7v3a03r0klgbh2mmw3ixm0"; depends=[colorspace]; }; - huge = derive2 { name="huge"; version="1.3.3"; sha256="18f8w4hdp9fdi2k5ip6fnrn5z47w4ybgxs2m6a7jdvd2v4wfdr69"; depends=[igraph MASS Matrix Rcpp RcppEigen]; }; + hues = derive2 { name="hues"; version="0.2.0"; sha256="062i7yc16nmnp15c1jh4xffw2lpklp36wkn1yvagh186ahnlgffx"; depends=[colorspace]; }; + huge = derive2 { name="huge"; version="1.3.4"; sha256="07n3j1va2z4v30rj22cww72khgzbz2xsp0yc0qswlrwyxi4my5i3"; depends=[igraph MASS Matrix Rcpp RcppEigen]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; humanize = derive2 { name="humanize"; version="0.2.0"; sha256="0hhhd640n77s8xaa2gbd9fckdk2yjg68gdb7wjy56a2khzqfssxr"; depends=[assertthat glue lubridate]; }; humanleague = derive2 { name="humanleague"; version="2.1.0"; sha256="1mp7lqwx97r60amllz9cjsixw21zspgs4zkp0nc63z315vgfzwrx"; depends=[Rcpp]; }; - humidity = derive2 { name="humidity"; version="0.1.4"; sha256="1nnrjk9wjvp28s615xd9wllnwv4js3kg7rj2f6al3sk3vhiqljsk"; depends=[]; }; + humidity = derive2 { name="humidity"; version="0.1.5"; sha256="143pn8jjinlda76b94qh5zw2sfajw0ifcx774x6adr2il5a5wm99"; depends=[]; }; hunspell = derive2 { name="hunspell"; version="3.0"; sha256="0mwqw5p0ph083plm2hr2hqr50bjg2dw862dpsfm4l2fgyy3rryq1"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.1.0"; sha256="1wwa1b96yglmnkvn209v8g0cvx567i2mxd7y6vjzzy5l428cf9f0"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate mapproj maps purrr RColorBrewer rlang stringr tidyr]; }; - hutils = derive2 { name="hutils"; version="1.5.0"; sha256="053zraq4c35w0lmpzgw03gw3r7dmq97yjfdldsv8d6sb1m4va7rk"; depends=[data_table fastmatch magrittr]; }; - hutilscpp = derive2 { name="hutilscpp"; version="0.2.0"; sha256="1wp51xsy9wx7y8nf6b9k2dqvc9bamikqjwnihnndsgajfygr6jwj"; depends=[data_table hutils Rcpp]; }; + hutils = derive2 { name="hutils"; version="1.5.1"; sha256="1x2x8gg2hdwxj1gz81pjls4y3yilssksirsbjnjd665rjs3jx7fj"; depends=[data_table fastmatch magrittr]; }; + hutilscpp = derive2 { name="hutilscpp"; version="0.3.0"; sha256="1x7h1fq6qyylda8k3a1v6s0cx7pf169k86akb6ccwgiikqqsp51h"; depends=[data_table hutils Rcpp]; }; huxtable = derive2 { name="huxtable"; version="4.7.0"; sha256="0pnba6k8mnn6wi4inlcap3ir7w784sxnvfvrc6g4iwql5s3rz6cz"; depends=[assertthat generics glue memoise rlang stringr tibble tidyselect]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwordcloud = derive2 { name="hwordcloud"; version="0.1.0"; sha256="0civbwv276lcwvfs4qzz14r8rk14kg1ml4zzhi3msnkkh29v70y2"; depends=[colourpicker htmlwidgets shiny wordcloud2]; }; @@ -8685,6 +8865,7 @@ in with self; { hypervolume = derive2 { name="hypervolume"; version="2.0.11"; sha256="1lfxsqvkzych9zvknxf4fnsfav9kv8cjss0pr4ny1wbmbvdxbbqc"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; + hypr = derive2 { name="hypr"; version="0.1.4"; sha256="1a1dysa08v9q4sr8w3mr1lyj8fl1cdgqa00dnaa9pj6k81djr2qj"; depends=[MASS pracma]; }; hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; iAdapt = derive2 { name="iAdapt"; version="0.1.0"; sha256="0ykcvqm1aswc4iypapml22194nxi6mxvxipy6wj7l9g4cazfa8j8"; depends=[shiny shinydashboard]; }; @@ -8694,8 +8875,8 @@ in with self; { iC10 = derive2 { name="iC10"; version="1.5"; sha256="1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl"; depends=[iC10TrainingData impute pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; iCARH = derive2 { name="iCARH"; version="2.0.0"; sha256="08krf7if4nlj7whchjqsr3gzvhz81w24wa2vxzs6znf9m0k5aqay"; depends=[abind ggplot2 igraph KEGGgraph MASS Matrix mc2d RCurl reshape2 rstan]; }; - iCellR = derive2 { name="iCellR"; version="1.1.4"; sha256="0gamxpn63rvj9pr33z0gdgc5fh5g71sz9vi94bah5271lqfbwqzx"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr RColorBrewer reshape Rtsne scatterplot3d shiny umap]; }; - iCiteR = derive2 { name="iCiteR"; version="0.1.0"; sha256="1h38m3blnpivrdz1hdgakl502zxb92gjkczra0a7izbq9fn19mfw"; depends=[httr jsonlite]; }; + iCellR = derive2 { name="iCellR"; version="1.2.5"; sha256="1n5zp7k766q6xwvhw0w5s9x3ws9229pkdllh334bpxz3saj12s3r"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr RColorBrewer reshape Rtsne scatterplot3d shiny umap]; }; + iCiteR = derive2 { name="iCiteR"; version="0.2.1"; sha256="0hbps2q5i7yj6zvqawlayhqqr5iv39yqc0xnk7fvra7rimzc1qid"; depends=[httr]; }; iClick = derive2 { name="iClick"; version="1.5"; sha256="0yq0r9nz1mf9ci6l30ylqxbgl8mf1ahyqzr7m6nks0ygxabipdnd"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries xts zoo]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; iDINGO = derive2 { name="iDINGO"; version="1.0.3"; sha256="0aa7g7shcbjzjwhnrh6hd4idjdka9rd7jawkvqvyjnwcql2qlapv"; depends=[GGMridge glasso igraph mvtnorm scales visNetwork]; }; @@ -8716,17 +8897,18 @@ in with self; { iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.1"; sha256="1sqg1n83m1308v6bk8ilra8w01frqyd8vpvmv63rllxz38r3vyhz"; depends=[]; }; iSDM = derive2 { name="iSDM"; version="1.0"; sha256="1hzs187mwv3k2wx6dpvkizjhkcx63mznd06wiw6047lf5jrlif0a"; depends=[ade4 colorRamps geometry geosphere maptools MASS pdist raster rgdal rgl sp virtualspecies]; }; - iSTATS = derive2 { name="iSTATS"; version="0.1.0"; sha256="0dv1hrhx0gf327fdfrn3j73i64v8kd8109ywz75s3xfacwn98yr2"; depends=[Cairo ggplot2 gtools shiny shinyBS shinyWidgets]; }; + iSTATS = derive2 { name="iSTATS"; version="1.1.0"; sha256="0hkyf3qa35hk8hs4qraz2y433ad93bjmi1mlmzfaw132x96f8zvf"; depends=[Cairo data_table ggplot2 gtools plotly rstudioapi shiny shinyBS shinyWidgets]; }; iTOP = derive2 { name="iTOP"; version="1.0.2"; sha256="1n6nlmmx2h63nksycgzr7qsnd1j6bxa629av7cfd3ihriim7dj47"; depends=[corpcor Matrix]; }; iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; + iZID = derive2 { name="iZID"; version="0.0.1"; sha256="1jaqdh6i5xyfw4y2wd9qivzjklf4j2xxnya8ssn7rv5bz6misgcz"; depends=[doParallel extraDistr foreach rootSolve]; }; iadf = derive2 { name="iadf"; version="0.1.0"; sha256="02zx9n4ncg10bbydrr05631vzc4w2b1jg3x6xiaffg7x5rh4mnyf"; depends=[dplR dplyr manipulate rlang tibble tidyr]; }; iai = derive2 { name="iai"; version="1.1.0"; sha256="1ck5znn3l80ahh6n6qvp8rw4307blkqyr1jmq9ksifb5hkqpxyfw"; depends=[JuliaCall rlang stringr]; }; - iarm = derive2 { name="iarm"; version="0.2.0"; sha256="0lg1q5z40hjm8wicniimv4wlb210qj7d5lmmknilzkpz4shwr44k"; depends=[eRm mRm PP psychotools vcdExtra]; }; + iarm = derive2 { name="iarm"; version="0.2.0"; sha256="0lg1q5z40hjm8wicniimv4wlb210qj7d5lmmknilzkpz4shwr44k"; depends=[eRm PP psychotools vcdExtra]; }; ibd = derive2 { name="ibd"; version="1.5"; sha256="0rxvy4hn4fpbv6y214ggkmgfvzwns5mkanp4h8201rjk3v84mk2r"; depends=[car emmeans lpSolve multcomp]; }; ibdreg = derive2 { name="ibdreg"; version="0.2.5"; sha256="1kaa5q1byi30wzr0mw4w2cv1ssxprzcwf91wrpqwkgcsdy7dkh2g"; depends=[]; }; ibeemd = derive2 { name="ibeemd"; version="1.0.1"; sha256="115z13q02gzixziknix2l53mi12zzg30ra9h35pv6qzrr11ra1ic"; depends=[deldir fields rgeos sp spdep]; }; - ibelief = derive2 { name="ibelief"; version="1.2"; sha256="1zh6bpg0gaybslr1p05qd5p2y5kxbgyhgha4j4v5d69d78jwgah9"; depends=[]; }; + ibelief = derive2 { name="ibelief"; version="1.3"; sha256="15jafk5b954hsl5kkbiyr8pi385c92il05jls33lyf4i25q5aqk3"; depends=[]; }; ibm = derive2 { name="ibm"; version="0.1.0"; sha256="0g6wg2qpa4q142xw2vq5pca4ll6pb8hyll5g0c93kk8crddk51s7"; depends=[Rcpp]; }; ibmcraftr = derive2 { name="ibmcraftr"; version="1.0.0"; sha256="0zm5j0a1wjj5agibp38h73qxpq0njvrhfq3077xhhfizcb3v24sb"; depends=[Rcpp]; }; ibmdbR = derive2 { name="ibmdbR"; version="1.50.0"; sha256="151gg05gcy5wpyvyflr4mc0jq1npxzq9pc4spjc81x2igd14c370"; depends=[arules ggplot2 MASS Matrix RODBC rpart rpart_plot]; }; @@ -8746,18 +8928,18 @@ in with self; { icd_data = derive2 { name="icd.data"; version="1.0"; sha256="0cynr9327wfg88661w4hali48mb6ghyvlqgybsa38k9bbf57v8aa"; depends=[]; }; icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; icemelt = derive2 { name="icemelt"; version="1.0"; sha256="13pjbyh2ggns36m8s43m2cb0kvisjlfxq75gqscldp75zjli2wi8"; depends=[survival]; }; - icenReg = derive2 { name="icenReg"; version="2.0.10"; sha256="184cl83rwr0h1b3dia1vd81zvfr0yqqmfszkzah3cqljkcirz8di"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; + icenReg = derive2 { name="icenReg"; version="2.0.11"; sha256="1skppn8ncj91c9hmsv07qjr8xc3ylzrynbm9c950ayr4w15907hp"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; icesAdvice = derive2 { name="icesAdvice"; version="2.0-0"; sha256="0sx93fsx2srmynnvs3bjb525m9a5w70qr9lghmkqa07crd991vfr"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.3-0"; sha256="0yaqlximxa3rcjxgrd0mii02mm9gpcxgw3i8pymp00bk8zixvj30"; depends=[]; }; icesSAG = derive2 { name="icesSAG"; version="1.3-6"; sha256="08nlsvs23j7ax03gwld3ycyvhfrhs70jdjif3562q1ysgvvkbf45"; depends=[httr icesVocab openssl png xml2]; }; - icesTAF = derive2 { name="icesTAF"; version="3.1-1"; sha256="0yyma72vrigr3kz4mxrkp90ijkmzlg79xdras45mrqq261cya3hm"; depends=[bibtex lattice remotes]; }; + icesTAF = derive2 { name="icesTAF"; version="3.2-0"; sha256="11c4glpjqz6hdxmsbh7q4hyqps6xdj0ph3310dicwnxwymbp1dmx"; depends=[bibtex lattice remotes]; }; icesVocab = derive2 { name="icesVocab"; version="1.1-4"; sha256="0ydrxxmglgcsmjccamhfyw4cr2q583y4836v3wm2gxs5pcf9q86g"; depends=[XML]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.4.0"; sha256="01whs8wssjx3qgdnc1ixh59gvn1bajqm5q3zj1jpw1dqjh71qzf0"; depends=[httr purrr rvest]; }; - icr = derive2 { name="icr"; version="0.6.0"; sha256="1cgb475kqnhczaknf0a1srw3221kr64nb8ljya0m7k658r28mnxr"; depends=[Rcpp]; }; + icr = derive2 { name="icr"; version="0.6.1"; sha256="1hmlh01p286zq26ya2x7hn4xba2g0q988pmvmxy6lfv0nigys0gs"; depends=[Rcpp]; }; icsw = derive2 { name="icsw"; version="1.0.0"; sha256="0g7bcqs0rpbs1p202i9wjbl8hhy3r196zambm044xyf7kvsbzzf6"; depends=[]; }; idar = derive2 { name="idar"; version="1.0"; sha256="1yfv3na4rcldkpzybf7la227z4ynsl1scrziirl5gp072k7zrs01"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; @@ -8770,7 +8952,7 @@ in with self; { identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ideq = derive2 { name="ideq"; version="0.1.1"; sha256="1lp1mxckj4znngavv701mxcx84n9409irnpcsadj5v1grmy9352x"; depends=[matrixcalc mvtnorm pdist Rcpp RcppArmadillo rgen]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; - idiogramFISH = derive2 { name="idiogramFISH"; version="1.5.1"; sha256="0snb8im0xxda3nymvn08x5677r97cvpdixa19v7zc2xiv6vchimp"; depends=[badger crayon kableExtra knitr prettydoc rmarkdown rvcheck]; }; + idiogramFISH = derive2 { name="idiogramFISH"; version="1.9.1"; sha256="1rc378k8ngjcmhsz7hkpvyh2ayxyl3sk89y191assy8zx0i84p8v"; depends=[crayon dplyr plyr]; }; idm = derive2 { name="idm"; version="1.8.2"; sha256="04f0i0kwdxywmj2i184knx5a5v9svx0lbam6wpz49hghg7qpy0w5"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idmTPreg = derive2 { name="idmTPreg"; version="1.1"; sha256="1329sjb4dnw3yiyg16whbj4l2v0kg8phg1x4ysvyp2kqkmw14yq6"; depends=[doParallel foreach survival]; }; idmodelr = derive2 { name="idmodelr"; version="0.3.1"; sha256="147rlcm7dj20xbwi392w82m1mnw90mvcp4yjgfplm34z6y90ljir"; depends=[deSolve dplyr furrr future ggplot2 magrittr purrr rlang stringr tibble tidyr viridis]; }; @@ -8789,28 +8971,28 @@ in with self; { ifultools = derive2 { name="ifultools"; version="2.0-5"; sha256="040kvbczcmmbaiaz0k0pdq9af541pjj6iwzh1a3w4szh9w6b5a3j"; depends=[MASS splus2R]; }; ig_vancouver_2014_topcolour = derive2 { name="ig.vancouver.2014.topcolour"; version="0.1.2.0"; sha256="0yclvm6xppf4w1qf25nf82hg1pliah68z7h3f683svv0j62q748h"; depends=[]; }; igate = derive2 { name="igate"; version="0.3.3"; sha256="0b8dk976z0764cmxwcq6w2f3akv7iivivharinq029p90b600qza"; depends=[dplyr ggplot2 kableExtra knitr rmarkdown stringr xtable]; }; - igraph = derive2 { name="igraph"; version="1.2.4.1"; sha256="1074y8mvprrqlkb4vwa2qc9l03r8d7p5vaaqacj4ljjs7dvcq6l9"; depends=[magrittr Matrix pkgconfig]; }; + igraph = derive2 { name="igraph"; version="1.2.4.2"; sha256="0scrbqb26pam8akblb4g9rkz888s0xffw3gcly78s4ijj67barxd"; depends=[magrittr Matrix pkgconfig]; }; igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; }; igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; - iheatmapr = derive2 { name="iheatmapr"; version="0.4.8"; sha256="0rypfhr05x3yqaywpkkd2mjn1vwbj6hw7v8nkwm2mbff9z87aam7"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; - ihpdr = derive2 { name="ihpdr"; version="1.0.0"; sha256="1z1cz6md8vzli1115q0qjcw6xiy485nkxawx0xwnzg07mwbqp2d4"; depends=[dplyr httr lubridate magrittr purrr readxl rlang rvest tidyr xml2]; }; + iheatmapr = derive2 { name="iheatmapr"; version="0.4.12"; sha256="0s479j9l35xiss599vablxgvg6i2j9zq9sxphsq4vdk3bafg84bw"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; + ihpdr = derive2 { name="ihpdr"; version="1.1.0"; sha256="0ga90dwnxygz63m894h4aj2lkjqi99qalkgw9ncfqggq5255h6l3"; depends=[dplyr httr lubridate magrittr purrr readxl rlang rvest tidyr xml2]; }; ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; }; iilasso = derive2 { name="iilasso"; version="0.0.2"; sha256="043m1n5840459zsknkb54801apb0a2cqfprncmj2wp235rbqj832"; depends=[BH Matrix Rcpp]; }; - ijtiff = derive2 { name="ijtiff"; version="2.0.3"; sha256="1zgjfc5vyz56cx63j28jkjxgl6y6q8n5f0mbkji6gr15p5f2hrls"; depends=[checkmate dplyr filesstrings fs glue magrittr purrr Rcpp readr rlang stringr withr]; }; + ijtiff = derive2 { name="ijtiff"; version="2.0.4"; sha256="1jfvqn22v2rji8rnyjmpa2y3q14r514q2wdmh7ykiplvhlm9kyga"; depends=[checkmate dplyr filesstrings fs glue magrittr purrr Rcpp readr rlang stringr withr]; }; iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imageData = derive2 { name="imageData"; version="0.1-59"; sha256="096y589r1mrbvzax5i7sdczkl613kyn8g93qcddqb6jjljw03qmi"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; imagefluency = derive2 { name="imagefluency"; version="0.2.1"; sha256="1hb38gv8bj9fshcwp0vjqh29pi0ynmh4hj4hf3izrgqiiy42hvxf"; depends=[magick OpenImageR pracma quadprog R_utils readbitmap]; }; - imagefx = derive2 { name="imagefx"; version="0.2.0"; sha256="0yvmxshc35y8gmwvwwj46g9rni53rv2k68gg3rw6qjzja8r4njls"; depends=[moments]; }; + imagefx = derive2 { name="imagefx"; version="0.3.0"; sha256="1jw85kb2xxq1yzjnvpd8l5avvamyh12kimss7w31ry2wgsad2mdz"; depends=[moments signal]; }; imager = derive2 { name="imager"; version="0.41.2"; sha256="19fqgjhg04garbipx20g72h9dd6k0jj4ac48nby6km4h665vrs4v"; depends=[Cairo downloader igraph jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; }; imagerExtra = derive2 { name="imagerExtra"; version="1.3.2"; sha256="1f6mxfn7am4ph9acbbx53r4bk4vsm73p7arh8rvrsic9pgma3gqf"; depends=[fftwtools imager magrittr Rcpp]; }; imageviewer = derive2 { name="imageviewer"; version="0.1.0"; sha256="1rsrwy5v0gnsmbay1zqijhvll2l1bs844m52w65588j9nlx4fci9"; depends=[htmlwidgets]; }; imagine = derive2 { name="imagine"; version="1.5.2"; sha256="1k017a1qw7bahk1aif3ky7f1aynvrppmhvxbcmai646pmx99kbxn"; depends=[Rcpp]; }; imbalance = derive2 { name="imbalance"; version="1.0.0"; sha256="1pfhwf4844m0a8qsm852am63x18vlkbs6m1s9izrpd219616skpr"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imdbapi = derive2 { name="imdbapi"; version="0.1.0"; sha256="11v7c0s7qqf02b186md5lhgkgmywkn8lmmanlz3gfcxca26g047y"; depends=[dplyr httr stringr]; }; - imfr = derive2 { name="imfr"; version="0.1.6"; sha256="0dvhz16wfmrrs21pcys8hjlwa9xkwc78pn76zj2aq1vyj9qby0wj"; depends=[dplyr httr jsonlite]; }; - imgpalr = derive2 { name="imgpalr"; version="0.2.1"; sha256="0ppzk0rza1rbaz69i8rxjmj7j1q26q75cn2yim8ji31j5hknqj23"; depends=[downloader dplyr jpeg magrittr tibble]; }; + imfr = derive2 { name="imfr"; version="0.1.7"; sha256="1ch05d37gp0niml80k2apab1942aa05r77s52vgh2pfcx9kklv20"; depends=[dplyr httr jsonlite]; }; + imgpalr = derive2 { name="imgpalr"; version="0.3.0"; sha256="1kb1ggrlkrh086nwq47sf2y20r7ydk4ww2j3gq0s4iz00aa34pxg"; depends=[downloader dplyr farver jpeg magrittr tibble]; }; imgrec = derive2 { name="imgrec"; version="0.1.0"; sha256="1v4q2hxil7f0jnj4nql44d9dssh8kz1mnj8ah5slndnn1fbymy8f"; depends=[base64enc dplyr httr jsonlite knitr rlang]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; imgw = derive2 { name="imgw"; version="0.2.0"; sha256="00zkjxqnw1zwcpj8mmdw1ydpcq0sbhs54ismm1i8r6ymb13j5fgj"; depends=[RCurl XML]; }; @@ -8846,14 +9028,14 @@ in with self; { incadata = derive2 { name="incadata"; version="0.8.2"; sha256="1ayr7krqcs25b5zg80m2s4g3pdasfaj2qfdnjp871im5i6bplai5"; depends=[backports decoder dplyr rvest sweidnumbr xml2]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; incidence = derive2 { name="incidence"; version="1.7.0"; sha256="1ljn9phxsf47qp12xv1ly76lm4gcqfnhrisx4sy9f6pz5rx6k5s3"; depends=[aweek ggplot2]; }; - inctools = derive2 { name="inctools"; version="1.0.14"; sha256="0ial852b96x310wzvla9lahxz3mwbqqv0l0lafs0bnmyaiiwycxv"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; + inctools = derive2 { name="inctools"; version="1.0.15"; sha256="0ikldiwgizs2p9vcalk5729dr6krysnyr4ni0ybg9gljw7iafdlf"; depends=[binom cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.9"; sha256="0i4qnvc0xb3ngnk8xdscmx7qnicfs7s6czawf6schb1nh2pjpzyq"; depends=[ape numDeriv phangorn Rcpp]; }; - indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; }; + indicspecies = derive2 { name="indicspecies"; version="1.7.8"; sha256="1j70plalgn9y69m958q5jxhrzd14prcjbniiljnjl243xbbydgv9"; depends=[permute]; }; indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; inegiR = derive2 { name="inegiR"; version="3.0.0"; sha256="1rhkdmpz7mxi7ddyygss5rlh3c8hgxhzdk3fnvnlizc1l55cc6c0"; depends=[jsonlite lubridate plyr tibbletime XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; ineqJD = derive2 { name="ineqJD"; version="1.0"; sha256="0anv384jwzn5gkc0jqsl81bkmrjd21br99c5q30xd6ncxavj4s57"; depends=[]; }; - infer = derive2 { name="infer"; version="0.5.0"; sha256="05h793inpvpi0nijkz9afny00l3mjwws3392hzg9fhvqjf3xddik"; depends=[dplyr ggplot2 glue magrittr purrr rlang tibble]; }; + infer = derive2 { name="infer"; version="0.5.1"; sha256="0m22bv71hmi3p89p1cx4rjqp7547i4sma8nl12qjvq1d4955lf28"; depends=[dplyr ggplot2 glue lifecycle magrittr purrr rlang tibble]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; inferference = derive2 { name="inferference"; version="1.0.0"; sha256="1x6i8ycba9z57m1n143p1j9pmlfrhjhi4iw0fsny8xmcvqrlr85p"; depends=[Formula lme4 numDeriv]; }; inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; @@ -8869,30 +9051,33 @@ in with self; { infra = derive2 { name="infra"; version="0.1.2"; sha256="0jycnnmrrjq37lv67xbvh6p63d6l4vbgf3i1z9y7r75d6asspzn1"; depends=[]; }; infraFDTD_assist = derive2 { name="infraFDTD.assist"; version="0.6"; sha256="04j5nl5vxk79iciz6s9bpiyn319c2dbh7fdahgwira2r30w2fxv9"; depends=[fields]; }; infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; - ingredients = derive2 { name="ingredients"; version="0.3.9"; sha256="1w6hz0wjas3p5qkn21wksp8m1rmmpfihjs3gfqajm182y3yrcyyz"; depends=[DALEX ggplot2 glmnet scales]; }; + ingredients = derive2 { name="ingredients"; version="0.4"; sha256="1sak7y80aq9blhr3gkxjdvfvpv49z39c40pl6gnh688qrlzz4csx"; depends=[DALEX ggplot2 gridExtra scales]; }; ini = derive2 { name="ini"; version="0.3.1"; sha256="04yqij344dwm0xqgara8xia42mlmij3i8711qbb5534w05a1l6bv"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; inlabru = derive2 { name="inlabru"; version="2.1.12"; sha256="0ry32hsf9f4hd1jka51d7jbxlalhknwnc3zj9i9bggx38bb9w9fg"; depends=[ggplot2 Matrix rgdal rgeos sp]; }; inline = derive2 { name="inline"; version="0.3.15"; sha256="0s4wssvpan189fijahknxq5s22ww9bzmdlmyhnra748r7khky17z"; depends=[]; }; inlmisc = derive2 { name="inlmisc"; version="0.4.8"; sha256="1zgpc4rfbx7l4hlaav3fyl68gd7xj8ff2fj1k4xy98jafi9j86mg"; depends=[checkmate data_table GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos rmarkdown scales sp tinytex xtable yaml]; }; + inops = derive2 { name="inops"; version="0.0.1"; sha256="1y402a9r542hpwd1nfdc07mbgnf9alpnykl9di1v8fy0qly8s0an"; depends=[]; }; inpdfr = derive2 { name="inpdfr"; version="0.1.8"; sha256="1xscrqkwl15l5r1sik6mnhzl868s9yxscm74sp740n3107md92hx"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; inplace = derive2 { name="inplace"; version="0.1.0"; sha256="1lmvfjxgficlzxbn953wvfa1n9lys9gqprix6zbqqr4d6vkm0srj"; depends=[Rcpp]; }; insect = derive2 { name="insect"; version="1.2.0"; sha256="0lbck8jbhymzkhm1iqd2y2xg8a26yjizw7x31b1l1kqc1l0p3kmv"; depends=[ape aphid kmer openssl phylogram RANN seqinr xml2]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; - insight = derive2 { name="insight"; version="0.5.0"; sha256="0lrh2l9n2zd9n3zzknsxz6nlasnrayx3bplxlz7m616g56gr5nfp"; depends=[]; }; + insight = derive2 { name="insight"; version="0.7.1"; sha256="0scjmr8qvwaswb9wfq2lxp1v5fl72way8cid9agrf0z1agp0adad"; depends=[]; }; insol = derive2 { name="insol"; version="1.2"; sha256="14ikz05375pjn9hby7kwkhcnykjilbnkdy5i8lsl7c5qdbhmqcm5"; depends=[raster rgdal]; }; - inspectdf = derive2 { name="inspectdf"; version="0.0.6"; sha256="1073yw26178f9ndx62wgqipim1irrdavka0p86m9c2q54cm13w1s"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; + inspectdf = derive2 { name="inspectdf"; version="0.0.7"; sha256="03yli2fiyb3kw189aga9hiyxm9f9b2lhpx1cjv9silfgm0xj54lh"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; inspectr = derive2 { name="inspectr"; version="1.0.0"; sha256="04rpr5ajpdx1d49y327dryxwxk27yljj4c96i9qglf02i9kmplkg"; depends=[openxlsx]; }; instaR = derive2 { name="instaR"; version="0.2.4"; sha256="0c4m471ragkpksr0h21cdgnjxcknf01xqz543dahxgzjg9ncjwhg"; depends=[httr jsonlite]; }; install_load = derive2 { name="install.load"; version="1.2.1"; sha256="148q0rjal5hfcb8ilxzd1bz38mn8vxqrsfg5x4jy48psk00fk3d9"; depends=[]; }; insuranceData = derive2 { name="insuranceData"; version="1.0"; sha256="0wryh8i1v3bnpbqn6d6dpxr9bwwl6mnh5cb5igz0yanh4m1rx96w"; depends=[]; }; - insurancerating = derive2 { name="insurancerating"; version="0.4.2"; sha256="16z129jhyr85riiki78f0l864j91fpikgkphkjf1qz4nc66r1p08"; depends=[classInt evtree ggplot2 mgcv stringr]; }; + insurancerating = derive2 { name="insurancerating"; version="0.4.3"; sha256="0m4ndbyinmqd1207qmw796zm7xs10bqyc5k3pqvvjy765fcni95k"; depends=[classInt data_table evtree ggplot2 lubridate mgcv stringr]; }; intRegGOF = derive2 { name="intRegGOF"; version="0.85-5"; sha256="0xjq8vdlgqlzrvp752gd4qfrpnpapx7k6xzfsvfril8ngvm9a162"; depends=[]; }; intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-9"; sha256="060sghkqsdrxpa340rvjskh2wafdkffa5q8nlbg1msnsmk639lkn"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-12"; sha256="1h8kzinfpp2rwal11xqs9g99rmigs0jlsr5h0qh0zsill73minid"; depends=[automap gstat intamap rgdal sp spatstat spcosa]; }; - intccr = derive2 { name="intccr"; version="1.1.4"; sha256="0a7g5jymalv282x5znwgza1z9y8s0qdijnd1al2yilqz1jwb9bmc"; depends=[alabama doParallel foreach numDeriv]; }; + intccr = derive2 { name="intccr"; version="2.0.0"; sha256="0861skkr9rlldlck1r5gv206s7wlx06bg4hgfqfbwqfih83r5zpz"; depends=[alabama doParallel foreach MASS]; }; intcensROC = derive2 { name="intcensROC"; version="0.1.1"; sha256="0qkgp6iw2s772zk2533jsar64f5mqgy4874swgarnfgd4jvkwy2k"; depends=[pracma Rcpp RcppEigen]; }; + intdag = derive2 { name="intdag"; version="1.0.1"; sha256="0mb0a1ccc67clfa75b4hl901zdmx7fxw713c4ybx3i5wc2ldl8ph"; depends=[]; }; + intePareto = derive2 { name="intePareto"; version="0.0.1"; sha256="0mynqvmdb39zqx1z2y6bscfjkwf880b7pd149xsdbc6f49hlnfw6"; depends=[apeglm biomaRt DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges rPref Rsamtools]; }; integIRTy = derive2 { name="integIRTy"; version="1.0.6"; sha256="0nyp9nixwyz1n2nydkh64lmd5z4qjcabwa1pyzv69rgw5gx60020"; depends=[abind doParallel foreach ltm MASS mclust]; }; integr = derive2 { name="integr"; version="1.0.0"; sha256="172vj29bdk42ibgwj7dl06wslpg2dccp1i8iscbz1yd0j5kw36sq"; depends=[DiagrammeR DiagrammeRsvg dplyr gtools rsvg]; }; intensity_analysis = derive2 { name="intensity.analysis"; version="0.1.6"; sha256="1ydmn7njqk6i2667zaha8mvfndss4im39czadg1f3z6sndp2lsji"; depends=[diffeR ggplot2 raster reshape2 rgdal]; }; @@ -8900,7 +9085,7 @@ in with self; { interactionTest = derive2 { name="interactionTest"; version="1.2"; sha256="0ycr839l07xahakr4r2jvlmd0fcxfm4qi3g8agnyh24c2kwl3ck2"; depends=[]; }; interactions = derive2 { name="interactions"; version="1.1.1"; sha256="0xsqsylfgqgdy7bh32v8x0yn5naf1jclv05dvpyvhladgd0q1c0m"; depends=[cli crayon generics ggplot2 jtools rlang tibble]; }; intercure = derive2 { name="intercure"; version="0.1.0"; sha256="0j71dqcbcfl1zpfidh3xys5h3ggyhrzq3avkdm9v18pv464x8xlv"; depends=[foreach iterators MASS Matrix survival]; }; - interep = derive2 { name="interep"; version="0.2.0"; sha256="18f5qkfq3rcr4n2vpdp4xp56cbg5z30cpk6wdchh64gly6g28bi0"; depends=[Rcpp RcppArmadillo]; }; + interep = derive2 { name="interep"; version="0.3.0"; sha256="03a51vambjl7gwxk43k47iff65lc6xs66vmkiw3dhxjr3b3nxrh8"; depends=[MASS Rcpp RcppArmadillo]; }; interferenceCI = derive2 { name="interferenceCI"; version="1.1"; sha256="19ky10nn6ygma6yy5h1krxx61aikh3yx5y39p68a944mz8f72vsn"; depends=[gtools]; }; interflex = derive2 { name="interflex"; version="1.0.8"; sha256="117bq8cid36v6d2lrcywv5xqh6wm2z0fj9hwkjzwqhfkd8qhpq0a"; depends=[doParallel foreach ggplot2 lfe Lmoments lmtest mgcv pcse Rcpp RcppArmadillo sandwich]; }; interfr = derive2 { name="interfr"; version="0.1.0"; sha256="1wn7i8dsll1qq3v39hgpbqnkjc8f4wlffy73453rw9lpq61y2fgj"; depends=[CircStats colorSpec plotrix]; }; @@ -8910,7 +9095,8 @@ in with self; { interlineaR = derive2 { name="interlineaR"; version="1.0"; sha256="0y1ym6iwly8sv94pdzwv2qy1g7z4hpqlrbcrpb1ds5a62a6axqj5"; depends=[reshape2 xml2]; }; internetarchive = derive2 { name="internetarchive"; version="0.1.6"; sha256="1cx9dxlrdz1xak4jrrjs2wsq6ml8n2xl0n0s6n9h3g247j4lfvnm"; depends=[dplyr httr]; }; interp = derive2 { name="interp"; version="1.0-32"; sha256="10ccsyz9wy31mdf58g7drifnb2zpbzcpk6pbffqxa6b0yxrmfwsa"; depends=[deldir Rcpp RcppEigen]; }; - interplot = derive2 { name="interplot"; version="0.2.1"; sha256="0kg17g12dccs6imdqkyagm3zqziah4hvlba72irpck03w6z4sdb3"; depends=[abind arm dplyr ggplot2 gridExtra interactionTest purrr]; }; + interplot = derive2 { name="interplot"; version="0.2.2"; sha256="10licnz1x97ky7plq3j5gf23lg14jcx7bavv9mwib7p39ls5lagq"; depends=[abind arm dplyr ggplot2 gridExtra interactionTest purrr]; }; + interpret = derive2 { name="interpret"; version="0.1.23"; sha256="06m35dmd029rrj762nqgxs6kj3zsz9k1b92idzyak1498i15xpxp"; depends=[]; }; interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; }; interval = derive2 { name="interval"; version="1.1-0.1"; sha256="1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"; depends=[Icens MLEcens perm survival]; }; intervals = derive2 { name="intervals"; version="0.15.1"; sha256="1r2akz8dpix1rgvdply4r3m2zc08r0n96w9c97hma80g61a3i2ws"; depends=[]; }; @@ -8942,6 +9128,7 @@ in with self; { iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; iotables = derive2 { name="iotables"; version="0.4.2"; sha256="1ds6j8x965fc2j11r507ljqwcaam0zz5q2vkhq9gkl53fjfgajlk"; depends=[dplyr eurostat forcats kableExtra knitr lubridate magrittr plyr purrr readxl tibble tidyr]; }; iotools = derive2 { name="iotools"; version="0.2-5"; sha256="0rn6kvlcijnhlwajh6nmi80qlamxgz0x3pn09yp4hyfpl3zxg1fz"; depends=[]; }; + ip2location = derive2 { name="ip2location"; version="8.0.0"; sha256="1rhy3jlcl4hcynhjgy3gjx9g9kyn30gq1jwfpll23jixvmrx64by"; depends=[jsonlite reticulate stringr]; }; ipc = derive2 { name="ipc"; version="0.1.3"; sha256="10h54j83l7khk1lkpdwn6hwaz31i3v6svg4q1lxzvr2aqdsj7hy0"; depends=[R6 shiny txtq]; }; ipcwswitch = derive2 { name="ipcwswitch"; version="1.0.3"; sha256="1pqlfkglgsahzsw7z9wsx7k0i9n0kx77g9p1j7i9dz7j74s6g09r"; depends=[survival]; }; ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; @@ -8956,11 +9143,13 @@ in with self; { ipred = derive2 { name="ipred"; version="0.9-9"; sha256="0vs1hqfx7yd0xdbmfsf2gim7spkni0845cj6gswn0nhdfdq7ma0d"; depends=[class MASS nnet prodlim rpart survival]; }; iprior = derive2 { name="iprior"; version="0.7.3"; sha256="15qzqwikxy85fcd7psz363b5wb0kpi85icfyb47hbgdhln8fi2qb"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; ips = derive2 { name="ips"; version="0.0.11"; sha256="02jxanfhsjrabj33nwjv71vdc87hiyzikyqrfdj9ix6dky6lm199"; depends=[ape phangorn plyr seqinr XML]; }; - iptmnetr = derive2 { name="iptmnetr"; version="0.1.5"; sha256="02lljbbr2sm90sgyjv6a17mbh758n93qqxfr900g0m557nsv35i8"; depends=[httr jsonlite]; }; + iptmnetr = derive2 { name="iptmnetr"; version="0.1.6"; sha256="1hahsmb9lk8ml1z8yfin2qswb2rskqbdzf3ndzddqyixf585vsaa"; depends=[httr jsonlite]; }; iptools = derive2 { name="iptools"; version="0.6.1"; sha256="143gawwp3aja5vycl43n6x5hzg3yvagi8x10v9y92hkif9v075qq"; depends=[AsioHeaders BH Rcpp readr stringi triebeard]; }; ipumsr = derive2 { name="ipumsr"; version="0.4.2"; sha256="1y1s1grmfkaax04i9ig57lv1l64hcwdn420kv1w51f3jh28hbdgg"; depends=[cli crayon dplyr haven hipread pillar purrr R6 raster Rcpp readr rlang tibble tidyselect xml2 zeallot]; }; ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; + ipwCoxCSV = derive2 { name="ipwCoxCSV"; version="1.0"; sha256="0avnvf4pnpxnik3iwwglpwkc8h0vsx9v6fxldkbvq7l9bphdbba1"; depends=[survival]; }; ipwErrorY = derive2 { name="ipwErrorY"; version="2.1"; sha256="14p22mwc120kdlf6r1hfx4kp7nqrz2nl2vpvy45j8rbrc571b6ka"; depends=[nleqslv]; }; + iq = derive2 { name="iq"; version="1.1"; sha256="0i0i9xc0mdz026gg3iqyyjplvn8b3di045j3h6iiis2gwjswi6pr"; depends=[]; }; iqLearn = derive2 { name="iqLearn"; version="1.5"; sha256="1zn43zvx0mjzh96bm73scacmladamy8jmhxim7hcfq39cfhiw3c8"; depends=[]; }; irace = derive2 { name="irace"; version="3.3"; sha256="040d1cl8q5hmcji66bvgvm9wb8w6v7xzfsggbrar8490s9ldjhj4"; depends=[]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; @@ -8974,7 +9163,7 @@ in with self; { irtDemo = derive2 { name="irtDemo"; version="0.1.4"; sha256="0rpwryybnj7b4bxn0mn1m496y85s2fpqdd78lmdl6jg1ck4j4pb3"; depends=[fGarch shiny]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; - irtplay = derive2 { name="irtplay"; version="1.1.0"; sha256="0wln9fw36j659k8dvk0kq63nhi39nxbsaym79wrfk0xl56c76ln3"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; + irtplay = derive2 { name="irtplay"; version="1.3.0"; sha256="1lix9j9xnid0npxmjyjk79an2jfcjf0k109d05cv5hv02813kj23"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; irtreliability = derive2 { name="irtreliability"; version="0.1-1"; sha256="15qs8bvgrwajj5kfd57rd34l1p2805ilyd7w60ngrqc14d6az9d2"; depends=[fastGHQuad ltm mirt]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; @@ -9014,9 +9203,10 @@ in with self; { itsmr = derive2 { name="itsmr"; version="1.9"; sha256="0dmijaq6q31irwrjqv5gq1yfbgggwb3m6rwbg4lx1r9l3cqays7i"; depends=[]; }; itunesr = derive2 { name="itunesr"; version="0.1.3"; sha256="1czwkrqy3jqw1x0z5zj2kvp4p11s5zdiswwhx9jfxdcsg86zhr45"; depends=[curl jsonlite lubridate xml2]; }; iva = derive2 { name="iva"; version="0.1.0"; sha256="0dchb263ygilxapwsw2gpl18z12wcjsz8zz5fg7h068hmcysa88g"; depends=[Formula ucminf]; }; + ivdesc = derive2 { name="ivdesc"; version="1.0.0"; sha256="134dia4wwg7pazc92ccsb3pmsp9kpszr3j5ziyh0ld53qdmcsmz3"; depends=[knitr purrr rsample]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; ivmodel = derive2 { name="ivmodel"; version="1.7.1"; sha256="0v8alqn141s9rymk29xqmdx7gpp8ivz4525afvarxmp9sm2rqq0q"; depends=[Formula ggplot2 Matrix reshape2]; }; - ivmte = derive2 { name="ivmte"; version="1.0.1"; sha256="12gr4b4l85q3n9j0j4hxq8203jp8lzgy33ifgq9grkyyimkfc5fa"; depends=[Formula polynom]; }; + ivmte = derive2 { name="ivmte"; version="1.1.0"; sha256="0a7m04n7lyqykfix0shjhbgnl502zlyigxb997v8wbmx9sx2vk56"; depends=[Formula]; }; ivpack = derive2 { name="ivpack"; version="1.2"; sha256="0cr5acjrn41d3q0b77hlg2jmsbf1msvys9gcavm1blsryg2bc03c"; depends=[AER lmtest sandwich]; }; ivpanel = derive2 { name="ivpanel"; version="1.0"; sha256="0irjmkw3nnd8ssidvj23lr0hihlhd9acsbaznh88lknx53ijc2qv"; depends=[Formula]; }; ivprobit = derive2 { name="ivprobit"; version="1.1"; sha256="05b5gf5gmi2yrkg61n7w12qlgpnjakd1z8hhqxy6py8hahsf84gm"; depends=[Formula]; }; @@ -9026,9 +9216,10 @@ in with self; { jSDM = derive2 { name="jSDM"; version="0.1.0"; sha256="0lkapg6v5lh53vnsg5hcr9qis8qimb6ilds23dqcyhi6w3dys9nb"; depends=[coda corrplot Rcpp RcppArmadillo RcppGSL]; }; jSonarR = derive2 { name="jSonarR"; version="1.1.1"; sha256="054q3ly471xa64yyz2as6vkr440ip1y8n5wl6s3zbhqy3bqkdqif"; depends=[jsonlite RCurl]; }; jaatha = derive2 { name="jaatha"; version="3.2.1"; sha256="0zqvylknvymggw5jl40cfyahfjy64wb25f0qymh78xbamv1hc85w"; depends=[assertthat R6]; }; + jabr = derive2 { name="jabr"; version="0.1.0"; sha256="0c8ihffwgj14phbl51cabk2jcnnxipqlbsxq73yvg57a8vj6yj24"; depends=[ckanr dplyr glue httr magrittr purrr rappdirs rlang stringr tibble tidyr]; }; jaccard = derive2 { name="jaccard"; version="0.1.0"; sha256="1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936"; depends=[dplyr magrittr qvalue Rcpp]; }; jack = derive2 { name="jack"; version="1.1.1"; sha256="1mp7cfmh3bzfansb3dyqq347qk6kkf4ndn23pbd78h1xcb54555b"; depends=[DescTools gmp multicool mvp partitions]; }; - jackalope = derive2 { name="jackalope"; version="0.1.2"; sha256="0mjlilsjh8y3rwskqa1xqhdz4f2za1a25jvhl4d3j54rc6ldkj0k"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; + jackalope = derive2 { name="jackalope"; version="1.0.0"; sha256="1v2n8ip0nfrdpd263yvr9jnmz9yx9m76vdwds18wj8504y95fzcv"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstraw = derive2 { name="jackstraw"; version="1.3"; sha256="02qcaf2p0fyni6n2zhd7vp65kniz74di0pf5jzz79jwj15cfd1b0"; depends=[cluster ClusterR corpcor irlba lfa qvalue rsvd]; }; jacpop = derive2 { name="jacpop"; version="0.6"; sha256="0kq6rn33civ2g6i5nwfqvcgmnn5k2dwmw60lkmz4ywm0y4xxlkai"; depends=[]; }; @@ -9056,46 +9247,45 @@ in with self; { jmdem = derive2 { name="jmdem"; version="1.0"; sha256="1qz2l02m4gnxrm1ankr5qqlskl8amphzj8r763yas218fvzfa34q"; depends=[statmod VGAM]; }; jmdl = derive2 { name="jmdl"; version="0.3.0"; sha256="0167yj368lh1n79jwbqs4g2asb67hfmgh97519linmfpx0n6xdpa"; depends=[boot Formula MASS minqa mnormt mvtnorm]; }; jmetrik = derive2 { name="jmetrik"; version="1.1"; sha256="1if1kxx8apgkbxpkjnlj2lpsfnyj2splsg1p3j5vxa7q6wx70f9j"; depends=[]; }; - jmotif = derive2 { name="jmotif"; version="1.0.3"; sha256="1llmrksajrd35kfdzq2vqfm17yv5kwark6gz3rvyzcmbrqk5spqv"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="2.2"; sha256="1vj9n1hsf780f7l0a22kmi3qm84j4dzjybjkh5zwh6bhwfjnjws3"; depends=[]; }; - jmv = derive2 { name="jmv"; version="0.9.6.1"; sha256="10b59415wb48k2wv2n74v89acgj843qk4pp0jkpns6nhymw41m0q"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; + jmv = derive2 { name="jmv"; version="1.0.8"; sha256="0h62kmg7z08a5kz4fyz0l1s1hx6i8p75xm5k2pq80jryd6nk3xkg"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; jmvconnect = derive2 { name="jmvconnect"; version="1.0.9"; sha256="1x74zwnp3cdwqsv7djnqcv6k0nrf7v7ng6pk79lzninbssm24sr1"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; - jmvcore = derive2 { name="jmvcore"; version="1.0.0"; sha256="1agwzmd24b22x303dpmb5qjbzsrxp287n52c7iavzx42sfishayi"; depends=[base64enc R6 rjson rlang stringi]; }; + jmvcore = derive2 { name="jmvcore"; version="1.0.8"; sha256="11g6cmiw6l3xkppm6xz1k2lm6xl69ll2av9vn755ngbvf09fgywn"; depends=[base64enc R6 rjson rlang stringi]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; joineR = derive2 { name="joineR"; version="1.2.4"; sha256="05wr7gr3mnsfj8a1m5v1b71gh3fc4pyhj6rqapls7iwrkywbf1b6"; depends=[lattice MASS nlme statmod survival]; }; joineRML = derive2 { name="joineRML"; version="0.4.2"; sha256="06a7iicq3fngsmmi8qcz2fdzdzvym5s70s3aaqlzxnl4sj9km3g2"; depends=[cobs doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; }; joineRmeta = derive2 { name="joineRmeta"; version="0.1.1"; sha256="0d9wwb3v43v30xjy67j366mhwixzz79bm67j01fqmcdsnmn3qpjn"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm nlme statmod survival]; }; - joinet = derive2 { name="joinet"; version="0.0.2"; sha256="16jzx1jdxig6i5qq313n261h0mnq3jyzr8dcxzpkdq2ckxqr9gbi"; depends=[cornet glmnet palasso]; }; - joint_Cox = derive2 { name="joint.Cox"; version="3.6"; sha256="161szy444p1yg21d9r76s3ibwmni8ydsh8frvwjjy9qp8nzcvqd1"; depends=[survival]; }; + joinet = derive2 { name="joinet"; version="0.0.3"; sha256="01rql7nidmzhrz6agy5kphsln5nl4lpyrqdrfmf5w98zjr8yqkpr"; depends=[cornet glmnet palasso]; }; + joint_Cox = derive2 { name="joint.Cox"; version="3.7"; sha256="1h9cqmly5rrrqvxzkx5fxjaqzks9hpvb2ggaw8b5rn67wbyblrl9"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.3"; sha256="0pra70jcnkqkzrxz5vc6lzi637rp5w8n9wbv9ix718vnd0j3fm3n"; depends=[]; }; jointMeanCov = derive2 { name="jointMeanCov"; version="0.1.0"; sha256="1cai5g63n11dirn9fldzkqxcnkxc20ndr9ygrr9rk0s1qz8x63pb"; depends=[glasso]; }; jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; jointseg = derive2 { name="jointseg"; version="1.0.2"; sha256="0zilkxk30w3l9mwikmsgvpy5misjggs98c3bjrjy1pfc4b0is943"; depends=[acnr DNAcopy matrixStats]; }; - jomo = derive2 { name="jomo"; version="2.6-9"; sha256="16ychdhhv8cii8zrdfdf5gzgnvmfaq573bmi00xqdf323q3lf3xr"; depends=[lme4 MASS ordinal survival]; }; + jomo = derive2 { name="jomo"; version="2.6-10"; sha256="1k9l4290g350zbw1pjs871q9bxj3j2h1dilxpp06v4wy4n7d8qs0"; depends=[lme4 MASS ordinal survival]; }; josaplay = derive2 { name="josaplay"; version="0.1.3"; sha256="0q6kjk3mjxwbqvq3zz0ylpi1viznp9pxzngqpjzv5sibv0ndh0lf"; depends=[magrittr utf8]; }; jose = derive2 { name="jose"; version="1.0"; sha256="1yna3x4hi0vn23dqi605nn1y313brwh2wcv527bm3mdbscgsi2jf"; depends=[jsonlite openssl]; }; - jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; }; + jpeg = derive2 { name="jpeg"; version="0.1-8.1"; sha256="1a8mi70x79a691r40yiw684jkg1mr9n8agkxlcksxcnrdybs9c0x"; depends=[]; }; jpmesh = derive2 { name="jpmesh"; version="1.1.3"; sha256="0ybv19bmrcwzan151p4px0vv6qnaqmk4fgqvqlh4syjnrb6xv0c5"; depends=[leaflet magrittr miniUI purrr rlang sf shiny tibble units]; }; jpndistrict = derive2 { name="jpndistrict"; version="0.3.4"; sha256="1z1rgqibksxrz0048zk78xlsm595jbm3y6xkrqcifm1xnqgh1fys"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr rlang sf shiny tibble tidyr tidyselect]; }; jqr = derive2 { name="jqr"; version="1.1.0"; sha256="00x5a61bsn2ywzc2haz19f6h0sqhlx7z3k1n9y0729dwm4id89ms"; depends=[lazyeval magrittr]; }; - jrc = derive2 { name="jrc"; version="0.2.0"; sha256="0rz32341najd7jyd8lkjf13g66a0kqdx5xa0a898wpq2g1lxi32c"; depends=[httpuv jsonlite stringi stringr]; }; + jrc = derive2 { name="jrc"; version="0.2.1"; sha256="1izyl787p3n36mrsk3bz16lxykf29140w7cj7mk0lg03qa8fx3cd"; depends=[httpuv jsonlite mime stringi stringr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrt = derive2 { name="jrt"; version="1.0.1"; sha256="023i0xqz8mhnjnii92vjw64mjnnlf8jaji99i4c2vxcr7m83jm0r"; depends=[directlabels dplyr ggplot2 ggsci irr mirt psych tidyr]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.4.1"; sha256="1gkivmvc0njm32w7yhbh02h9p212xa3m4cvrwcy7yray8g6phdxp"; depends=[]; }; js = derive2 { name="js"; version="1.1"; sha256="1xsdr14k4djcd1nqybvfzhviics4igsj8yz3r0j2nqhin2wjynlf"; depends=[V8]; }; jsTree = derive2 { name="jsTree"; version="1.0.1"; sha256="0n754illyw29bprll676k9qm5vk5h8qss6gb8lls57kdzj51x2jz"; depends=[data_table htmlwidgets jsonlite]; }; - jskm = derive2 { name="jskm"; version="0.3.7"; sha256="006k7prql4i18pbjksy4k16mlv1j288gc9l3b5l5j8m3xh70n8cp"; depends=[ggplot2 gridExtra plyr scales survey survival]; }; - jsmodule = derive2 { name="jsmodule"; version="1.0.1"; sha256="0sga88gdgn7dnafamnqba6iqlmbwgz0cgk4l17fv17qz1va2lsz7"; depends=[data_table devEMF DT epiDisplay geepack GGally ggplot2 haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; + jskm = derive2 { name="jskm"; version="0.3.8"; sha256="1z420lx4ayn19k8d13p4ii8r035jingli618mpfjl3wk95hzigqf"; depends=[ggplot2 gridExtra plyr scales survey survival]; }; + jsmodule = derive2 { name="jsmodule"; version="1.0.4"; sha256="1b81k4kgx0bzwdvq777gfj36mhw1832fbb8bijx6np2w46z1xkyg"; depends=[data_table devEMF DT epiDisplay geepack GGally ggplot2 haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; json64 = derive2 { name="json64"; version="0.1.3"; sha256="19q8qgf4wnd3np12ajy180klpjy0g2csw5micwb4sl7qfzl6wc7j"; depends=[jsonlite]; }; - jsonify = derive2 { name="jsonify"; version="0.2.1"; sha256="1jrc7w9i0riy6ls18d127i5ac6wlpc03n01bw74kkrwl4f6f17fn"; depends=[BH rapidjsonr Rcpp]; }; + jsonify = derive2 { name="jsonify"; version="1.0.0"; sha256="0cxdbihcl4w43gvskjw420i6dm689jcydp2dzc371152ysdsjjzd"; depends=[BH rapidjsonr Rcpp]; }; jsonld = derive2 { name="jsonld"; version="2.1"; sha256="0lp0lp9nbk31dia2nq6xba29ymak9h5wl4zbq4pdqw6qm9iwz6ww"; depends=[curl jsonlite V8]; }; jsonlite = derive2 { name="jsonlite"; version="1.6"; sha256="0lyvhnr6n57h3a89bvipii7x17nvfaycm9j5j50bfrlr48jv9ic8"; depends=[]; }; jsonstat = derive2 { name="jsonstat"; version="0.0.2"; sha256="0p0d3snl1971p5ikrkmwqrjjh4fy0b89qk3rnd1dayfb0r80xnnj"; depends=[cli dplyr jsonlite rlang]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.1.0"; sha256="1vxklvkva547mzbgi7hll46sfx274c6j4m70algygphz783x3dsx"; depends=[V8]; }; jsr223 = derive2 { name="jsr223"; version="0.3.3"; sha256="0i00nbsj6b4mx9pgp5rana1kj57hi4lz3lsiniv7baz5avmhp65n"; depends=[curl jdx R6 rJava]; }; - jstable = derive2 { name="jstable"; version="0.8.6"; sha256="0gklfmz4jvxnqb1riijhyz65bj6n53kc3kjmbi17acan0s7bvl01"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; + jstable = derive2 { name="jstable"; version="0.9.0"; sha256="1qfqz6lisl6pksxfb0anqcm4m01ljr2nscz2f1agcpimrwlcmgvr"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; jstor = derive2 { name="jstor"; version="0.3.7"; sha256="0if7ngqs9ncnkg9kiag3k51ipxiyrkaqm7lzmvp84hysqq8536jc"; depends=[cli crayon dplyr furrr magrittr pryr purrr readr rlang stringr tibble tidyr xml2]; }; jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; }; jtools = derive2 { name="jtools"; version="2.0.1"; sha256="03c3nii7il8wjdpv99xqlbpf12hjpw7ni4vdqxmkffybra6c97nx"; depends=[crayon ggplot2 magrittr pander pkgconfig rlang tibble]; }; @@ -9120,11 +9310,11 @@ in with self; { kappalab = derive2 { name="kappalab"; version="0.4-7"; sha256="16bwbwwqmq2w7vy8p3wg0y80wfgc8q5l1ly1mqh51xi240z1qmq0"; depends=[kernlab lpSolve quadprog]; }; kaps = derive2 { name="kaps"; version="1.0.2"; sha256="0jg4smbq51v88i3815icb284j97iam09pc52rv3izxa57nv9a0gz"; depends=[coin Formula survival]; }; karaoke = derive2 { name="karaoke"; version="1.0"; sha256="1kx11lijdffhhh8prjgsamshgg2v29b2i129fjqi079waa335352"; depends=[seewave tuneR]; }; - kayadata = derive2 { name="kayadata"; version="0.4.0"; sha256="0azy6aiwwi1imcw242b8c917qrni52biymgxcicfch0ncr62xrvf"; depends=[dplyr forcats ggplot2 magrittr scales stringr tidyr]; }; + kayadata = derive2 { name="kayadata"; version="0.4.2"; sha256="198wa3bzvgk97b65v11nnbdw0myyricy0ig4b52n3m5ib9781snm"; depends=[dplyr forcats ggplot2 magrittr scales stringr tidyr]; }; kazaam = derive2 { name="kazaam"; version="0.1-0"; sha256="0j7vysnmiv9sggcxdn3nrgfvyl52pza4kkjnsa0xlb3fzq9qpwlz"; depends=[pbdMPI]; }; kcirt = derive2 { name="kcirt"; version="0.6.0"; sha256="1gm3c89i5dq7lj8khc12v30j1c0l1gwb4kv24cyy1yw6wg40sjig"; depends=[corpcor mvtnorm snowfall]; }; kcpRS = derive2 { name="kcpRS"; version="1.0.0"; sha256="067j91rhw56kf15h7hxpm9qr6i59fvy5fh9ycfdqcps83wjgx62x"; depends=[doParallel foreach RColorBrewer Rcpp roll]; }; - kde1d = derive2 { name="kde1d"; version="0.4.0"; sha256="0sgq85fn5zfdczazq6wb8rgiv7bab6j3zh8gl2bsm1925h8k4x0p"; depends=[BH cctools qrng Rcpp RcppEigen]; }; + kde1d = derive2 { name="kde1d"; version="1.0.2"; sha256="0m6y1anzl5agb8xpywn2pv6hx4l7k0352bxnzxcs23iksbimxx13"; depends=[BH randtoolbox Rcpp RcppEigen]; }; kdecopula = derive2 { name="kdecopula"; version="0.9.2"; sha256="0g5c12wm3byd4chd8i9mxv599gsf4ip4qghx83j3mmhsmn05zf4y"; depends=[lattice locfit qrng quadprog Rcpp RcppArmadillo]; }; kdensity = derive2 { name="kdensity"; version="1.0.1"; sha256="1iinwbyn3d10gsh7i43sm9hf93baqla3gd5s10kiik76r7d97pdc"; depends=[assertthat]; }; kdetrees = derive2 { name="kdetrees"; version="0.1.5"; sha256="1plf2yp2vl3r5znp5j92l6hx1kgj0pzs7ffqgvz2nap5nf1c6rdg"; depends=[ape distory ggplot2]; }; @@ -9137,7 +9327,7 @@ in with self; { kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.4"; sha256="1mfqblvsn9p6gdcnbypfpzk0xzn6bz1ajbrkz2dap5w35dia3kxa"; depends=[actuar dplyr ggplot2 tibble]; }; kequate = derive2 { name="kequate"; version="1.6.2"; sha256="08p2dv5swp5458n9sx262s330cj8iy86vr6d8989mjzfys2jyb4q"; depends=[equateIRT ltm mirt]; }; - keras = derive2 { name="keras"; version="2.2.4.1"; sha256="0zirg7vmlq90fjd4p5mgyyrdfg92az8yc4ynbi9w63a39xl03ys8"; depends=[generics magrittr R6 reticulate tensorflow tfruns zeallot]; }; + keras = derive2 { name="keras"; version="2.2.5.0"; sha256="14a1mhx95446s8smd4s7adzlmpzx18kqsbgzva4gbya1b48bkw3l"; depends=[generics magrittr R6 reticulate tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; kerasformula = derive2 { name="kerasformula"; version="1.5.1"; sha256="1b4mq1y41lz8maszlrm7w907vcz7in8napfnhas7dgal1kid4mcf"; depends=[dplyr ggplot2 keras Matrix]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; @@ -9147,12 +9337,11 @@ in with self; { kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; kernelPSI = derive2 { name="kernelPSI"; version="1.1.0"; sha256="09fdh3zgc13a6i66kw9qmsy8wa7mq7359ym3srf5dzv57hz9x8md"; depends=[CompQuadForm kernlab lmtest pracma Rcpp RcppArmadillo]; }; kernelTDA = derive2 { name="kernelTDA"; version="0.1.1"; sha256="0rghj0yx32r6565mb06k83qfmnf7lajdhdg2zf8kjd9jyzidqdrn"; depends=[BH mvtnorm Rcpp RcppEigen Rdpack]; }; - kernelboot = derive2 { name="kernelboot"; version="0.1.5"; sha256="0m31akhya7390lbkw0cjxcrzw28njbz4smd35m93aarb2lgpcj4k"; depends=[future future_apply Rcpp]; }; + kernelboot = derive2 { name="kernelboot"; version="0.1.6"; sha256="151jksyd316wdlinzikpik9g4x4qnqyl87sg4lbdnzq6w35c5j38"; depends=[future future_apply Rcpp]; }; kernhaz = derive2 { name="kernhaz"; version="0.1.0"; sha256="1cxwjnfyhxfjdbhs21airycs704jic21pdpsbxsx37wkl11cxpai"; depends=[doParallel foreach GA rgl]; }; - kernlab = derive2 { name="kernlab"; version="0.9-27"; sha256="1m0xqf6gyvwayz7w3c83y32ayvnlz0jicj8ijk808zq9sh7dbbgn"; depends=[]; }; + kernlab = derive2 { name="kernlab"; version="0.9-29"; sha256="0vqhndl4zm7pvkfvq0f6i9cbrm7pij6kmdp7d7w39pa100x6knn3"; depends=[]; }; kernplus = derive2 { name="kernplus"; version="0.1.2"; sha256="0z5zpj89nw7cdphg6frmjwqjxsl6g95xsa8zgsxmw2q75wwj1saz"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.5"; sha256="1kcj710q8jbc34g6fcv2nk07hpsb81mfx8hvivgxq8x58028gjzs"; depends=[MASS mvtnorm]; }; - kexpmv = derive2 { name="kexpmv"; version="0.0.3"; sha256="1nx2bpyc06vlr78nhig4zaaygphjp4wqsz9jzhs4qx8wy3kh7rmy"; depends=[Rcpp SparseM]; }; keyholder = derive2 { name="keyholder"; version="0.1.3"; sha256="0r45wd36bf3ir3j3llcy40w6l8440ncvx3c1f6qvb8zgl4bl6z22"; depends=[dplyr rlang tibble]; }; keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.1.1"; sha256="0w8hcxxx47zyz2cbz2s8va2rfb6s2ziw9ck1slq9kh3aqsx3i9g0"; depends=[]; }; @@ -9162,7 +9351,7 @@ in with self; { kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; - khroma = derive2 { name="khroma"; version="1.2.0"; sha256="09a9fkk8jds8byyh0si4bnadyzqkljndfgayr4kiazyify3i0nqw"; depends=[ggplot2 scales]; }; + khroma = derive2 { name="khroma"; version="1.3.0"; sha256="1bpap5ljnsjwj0d6r90zhxvgs87j6v2pwxxd6ny14jzn402f1zp8"; depends=[]; }; kidney_epi = derive2 { name="kidney.epi"; version="1.1.0"; sha256="191yrqdviwvfl62c62qqfa154hglxpfwcxllhgwlm8nsysg46z5i"; depends=[]; }; kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; @@ -9176,6 +9365,7 @@ in with self; { kiwisR = derive2 { name="kiwisR"; version="0.1.7"; sha256="0xyrxk8109s1wfbacfjip0ch77jbhb4y8rqxz4cyml4l5kyw4zf6"; depends=[dplyr httr jsonlite lubridate tibble]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; klaR = derive2 { name="klaR"; version="0.6-14"; sha256="1g995df6286sd64nw7q9bihzkqhrasks45n8xk678y57kcadksai"; depends=[combinat MASS questionr]; }; + klassR = derive2 { name="klassR"; version="0.1.2"; sha256="1wfgqy4pfbaikm0qqf6dirjw0imbl6si9i0nwn8l17i7c8g8g55s"; depends=[httr jsonlite tm]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; klin = derive2 { name="klin"; version="2007-02-05"; sha256="0j0hr4bppzk754a66q5z42h7jzfavqpxgl7y266804aginfqm1ax"; depends=[Matrix]; }; klustR = derive2 { name="klustR"; version="0.1.0"; sha256="1g2q6h3cbm8v3gqz0f6v8bl5na9972k38d94czjfxmx4cv7wfgx8"; depends=[htmlwidgets jsonlite]; }; @@ -9194,9 +9384,10 @@ in with self; { kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; knitcitations = derive2 { name="knitcitations"; version="1.0.10"; sha256="0d73qr1zhkx0255vzzf7fs8vpmfnzl91ni4zp5y0l42h8p98vdn5"; depends=[digest httr RefManageR]; }; - knitr = derive2 { name="knitr"; version="1.25"; sha256="0lsc201a4f6xksmsklhr6gmhl0mxih0xhlcdvhs2ypzcx1pvkpnv"; depends=[evaluate highr markdown stringr xfun yaml]; }; + knitr = derive2 { name="knitr"; version="1.26"; sha256="08f3bdd5cnnbigybr9vmkhq12n64pbmn4layl3w5rwk8xi5kbnrq"; depends=[evaluate highr markdown stringr xfun yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.2"; sha256="1aj60j7f0gcs120fdrnfbnb7vk7lfn1phil0mghg6a5zldz4cqs3"; depends=[knitr markdown rmarkdown]; }; knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.1.0"; sha256="18v5jrscfrin3mcs63bpj0q1drxk3zkhlbw93sqh0qrq04d4x02v"; depends=[R_oo R6]; }; + knn_covertree = derive2 { name="knn.covertree"; version="1.0"; sha256="0msfcmwydws7q7m5jdb0dxab0nkbl7mq5llg6v3r4qrnlvrdggvz"; depends=[Matrix Rcpp RcppEigen]; }; knnGarden = derive2 { name="knnGarden"; version="1.0.1"; sha256="1gmhgr42l6pvc6pzlq5khrlh080795b0v1l5xf956g2ckgk5r8m1"; depends=[cluster]; }; knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; }; @@ -9209,7 +9400,7 @@ in with self; { koRpus_lang_en = derive2 { name="koRpus.lang.en"; version="0.1-3"; sha256="013zxm5x5hwdx1hqgb7mh3zmn8dri3fhq1brmzg936gddhxap6is"; depends=[koRpus sylly_en]; }; kofdata = derive2 { name="kofdata"; version="0.1.3.3"; sha256="08rmqm8z1xqf2kdjrxlj90v2fc2cqj43yynm1k46vmcs9m224y9k"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.3"; sha256="0w0881ydnqdah04sifi25ypzxdwnsiqxfq1xam4yhr670bdak1vm"; depends=[bigmemory]; }; - kohonen = derive2 { name="kohonen"; version="3.0.8"; sha256="1zbfqa1qdlry8w6xhypkiknc5gn98v1ijhlsfka8zjg8ajhqgn1q"; depends=[MASS Rcpp]; }; + kohonen = derive2 { name="kohonen"; version="3.0.10"; sha256="1ck7j13x701g67bx81x7plszz804jfhl1yg42krcj9x88vm5cscr"; depends=[Rcpp]; }; kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komadown = derive2 { name="komadown"; version="0.2.0"; sha256="0mw1bcrg10yy1y844lpik70979420h0nsar48v5p3qk783pymbdp"; depends=[bookdown rmarkdown]; }; @@ -9221,10 +9412,10 @@ in with self; { kpmt = derive2 { name="kpmt"; version="0.1.0"; sha256="15d26khc0v3kc1c7l1avqp48pfqmc6xj32029mv7myivr41ashk3"; depends=[matrixStats]; }; kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; }; kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; - krige = derive2 { name="krige"; version="0.2-1"; sha256="1g8298xnjjaxzfn53xwadnxr1bpn586xyiljq0gzibisnj2453fs"; depends=[MASS mvtnorm]; }; + krige = derive2 { name="krige"; version="0.3-1"; sha256="1dxn9prl79ln0m5dlwh62m553lrah1w1kwix02xafhiawl4rxp40"; depends=[MASS mvtnorm]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; krm = derive2 { name="krm"; version="2018.8-17"; sha256="0d4isfzhlz9kxq0sbb1m60wnvcnlqzz8d45hiikgf1dfbngkyh2a"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.11.5"; sha256="06ymx244yknmpl6935l4pafqbm4gcbpnhqg7rinql6rrfr9mcrag"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; + ks = derive2 { name="ks"; version="1.11.6"; sha256="0hcccjfqnzdxkmnfzq8c5a7yhc138azwyl7rp29d1vl1jawwrwfq"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; ksNN = derive2 { name="ksNN"; version="0.1.2"; sha256="06x471hck95xqy7rbh53ibhzh6kfjra7y9ipqdj2rqdkmfdj72q8"; depends=[Rcpp]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; @@ -9234,13 +9425,13 @@ in with self; { ktaucenters = derive2 { name="ktaucenters"; version="0.1.0"; sha256="15ddjr4c90b5hc4977gk35zb2kswrcvai3xighy7qj6g9lgiszgf"; depends=[dbscan dplyr GSE MASS]; }; ktsolve = derive2 { name="ktsolve"; version="1.2"; sha256="1606b9anlqjwcbf3jp1rpwzvyx94k79q6zw3p9j0a4nxdvgxlx1j"; depends=[BB nleqslv rootSolve]; }; ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; }; - kubik = derive2 { name="kubik"; version="0.1.1"; sha256="0f0gvnqlip3mhp1ss82c9iwba5y9qmgdplvvpycs94x3fs5gjqlm"; depends=[intoo]; }; + kubik = derive2 { name="kubik"; version="0.1.2"; sha256="1cjr8vcvjgy425sgr23cl2xrsz9smgil4lkkzm94b8g5rwyk731g"; depends=[intoo]; }; kuiper_2samp = derive2 { name="kuiper.2samp"; version="1.0"; sha256="0gcgayh7qdic9zprdvs6r8qvpqs467zrm0qzp2acb7alcp01jhpi"; depends=[]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; kutils = derive2 { name="kutils"; version="1.69"; sha256="12pg26a85h0jxlfcyai68dbh4bq1gnq8v1ngi8k9qvafbrpc6gx8"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; }; kvh = derive2 { name="kvh"; version="1.4.1"; sha256="0hnqlybphx8qnx98ynykxpz4ys4prp9zbmkak02qlvmnxwc2cqg0"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.3.0"; sha256="1rlm7i95yw66asgkag93phig2y9lic4xl2fv3cbnr3v751f6a59m"; depends=[hydroGOF lattice]; }; - kyotil = derive2 { name="kyotil"; version="2018.10-17"; sha256="12rrr7ynjwhcskjkfkv11q5xpdfn9j27vmnsd0r0vc2w2b25217k"; depends=[]; }; + kyotil = derive2 { name="kyotil"; version="2019.11-22"; sha256="13ihijshgzi3lg07p24yzyxjsrfy9nsf6r5vcssz19y9w26scaj2"; depends=[]; }; kza = derive2 { name="kza"; version="4.1.0"; sha256="128r4xmqxy1i1svcmv8786qqmriyqygd8d49cp53x8gb56k011xa"; depends=[]; }; kzfs = derive2 { name="kzfs"; version="1.5.0.2"; sha256="0x0fc807p0pwsjkhjq51ymwr9nhs6cb0m82029cz8bbn3yf6cymq"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; @@ -9255,6 +9446,7 @@ in with self; { labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; labelled = derive2 { name="labelled"; version="2.2.1"; sha256="1mrpsayrar5m3w2s7ck3m5x62bcns1jhyc6jw12b3bdca251v1ai"; depends=[dplyr haven]; }; + labelmachine = derive2 { name="labelmachine"; version="1.0.0"; sha256="18l7argmf7d60cv34w7acjg4bk08nhi2cc5p61sx2zmq28v8nndr"; depends=[yaml]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; labstatR = derive2 { name="labstatR"; version="1.0.9"; sha256="1ysk23dwan1lsfwnf9v86yqyzc8wsgzmy18ycz34s4d9biq6y1zd"; depends=[]; }; labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; @@ -9276,12 +9468,12 @@ in with self; { landsat = derive2 { name="landsat"; version="1.0.8"; sha256="07zvj1yyryxk7rwgcrf1kl32p2karkkqz6xrnwy1096dg9iw2js7"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; - landscapemetrics = derive2 { name="landscapemetrics"; version="1.2.2"; sha256="1f6s166khqzz9vlw58wal21rp9cf5p7892vq3lz5ywq4bs8pg7fd"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; + landscapemetrics = derive2 { name="landscapemetrics"; version="1.3"; sha256="1x7fm6gs9pxkcbj182w2cfpsp9bg2chgc9pg7w0hbydz3fnv8whx"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; landscapetools = derive2 { name="landscapetools"; version="0.5.0"; sha256="11zp6r414nkj8vhsbryzhkxmpal2bva8msaxf1v69xax70ilxyf1"; depends=[ggplot2 raster Rcpp tibble]; }; - landsepi = derive2 { name="landsepi"; version="0.0.7"; sha256="00ckjjyq33y362xhwjic8rwz06ml3s5l8wxxf7cgh0xkzv5hwcnr"; depends=[fields maptools MASS Matrix Rcpp rgdal rgeos sf sp splancs]; }; + landsepi = derive2 { name="landsepi"; version="0.0.8"; sha256="0k2hkrj0r3hx5jvmgx852s030md3cqhm7yixl0xxlkxwqrylw7qc"; depends=[fields maptools MASS Matrix Rcpp rgdal rgeos sf sp splancs]; }; languageR = derive2 { name="languageR"; version="1.5.0"; sha256="1iipnr2b4hd2w718prbh075j56m5xnchlcb2vg26m16qpydp6afn"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.4"; sha256="1q82shdcdd84nr6bnfwgyyb81z8dycvj1i3vhwvdg710s15rgiyk"; depends=[attempt curl httr jsonlite]; }; - languageserver = derive2 { name="languageserver"; version="0.3.1"; sha256="19dq4x4lz89gzmcv1fksq95hw9xq86g4x75cz82jrnsqmiyf135x"; depends=[callr collections desc jsonlite lintr R6 readr repr stringr styler]; }; + languageserver = derive2 { name="languageserver"; version="0.3.2"; sha256="1sd2c9a0fqk4yag5cmzpnpkqi5nqq4gnzyv268vq9ch60pm610km"; depends=[callr collections desc jsonlite lintr R6 readr repr stringr styler xml2 xmlparsedata]; }; lans2r = derive2 { name="lans2r"; version="1.0.5"; sha256="1m3hz85gl9m4vafdy7mj3z560d11mdwlwvnzy8n7d1cjqryn7a2b"; depends=[dplyr ggplot2 lazyeval R_matlab reshape2 tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; }; @@ -9293,7 +9485,7 @@ in with self; { lassoshooting = derive2 { name="lassoshooting"; version="0.1.5-1"; sha256="0ixjw8akplcfbzwyry9p4bhbcm128yghz2bjf9yr8np6qrn5ym22"; depends=[]; }; latdiag = derive2 { name="latdiag"; version="0.2-4"; sha256="051chvky3hlfr4hwm9qickl6aaxwnxa88zksmzczqfspby771hq6"; depends=[]; }; latentnet = derive2 { name="latentnet"; version="2.9.0"; sha256="0gmv4h6zijhgypkasr1y45lx7ksfhfpdgrqqxan4qnxfqp3kxbrr"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; - later = derive2 { name="later"; version="0.8.0"; sha256="08g503xjxrfxvrzj0cavsrz4m8ykbha64344j1w2r6v17js2hakb"; depends=[BH Rcpp rlang]; }; + later = derive2 { name="later"; version="1.0.0"; sha256="11xjavj7siz0xv2ffq1ld4bwl35jyrcfpvvs4p3ilpifxx49hyr7"; depends=[BH Rcpp rlang]; }; latex2exp = derive2 { name="latex2exp"; version="0.4.0"; sha256="12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw"; depends=[magrittr stringr]; }; latexpdf = derive2 { name="latexpdf"; version="0.1.6"; sha256="07g33z5lyxinlrzpk6pd41m4c4bbfql611yqcqxasf8wra9bb0jr"; depends=[]; }; latte = derive2 { name="latte"; version="0.2.1"; sha256="1dcwxxj3yran5a3a8vvdfmx4ap69ql2jncxvmci4p4vcw4ki9j9g"; depends=[dplyr ggplot2 glue magrittr memoise mpoly stringr usethis]; }; @@ -9314,16 +9506,17 @@ in with self; { lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; }; lazyWeave = derive2 { name="lazyWeave"; version="3.0.2"; sha256="1a7l0rgkp3xq2s6bikciq778fwyr282baa6jk9ip4a71s931p2ag"; depends=[Hmisc labelVector]; }; lazyeval = derive2 { name="lazyeval"; version="0.2.2"; sha256="1m10i059csrcqkcn59a8wspn784alxsq3symzhn24mhhl894346n"; depends=[]; }; + lazyraster = derive2 { name="lazyraster"; version="0.5.0"; sha256="0zf9xlxyzmgxy1nl2kg7fvpfamjz04gf4yxjn3r9j7fjkik35cnp"; depends=[quadmesh raster vapour]; }; lazyrmd = derive2 { name="lazyrmd"; version="0.2.0.1"; sha256="0yzamy1bfq0d7mnrr24wzvvw6lq7rhfs6qnqypfmym65j5kfj0f8"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; - lazytrade = derive2 { name="lazytrade"; version="0.3.4"; sha256="1j1da1848vjkvvnc6x3svmdy0fjn5pkn24llriy7w3mj8lr4bdpb"; depends=[dplyr h2o lubridate magrittr openssl ReinforcementLearning tidyverse]; }; + lazytrade = derive2 { name="lazytrade"; version="0.3.6"; sha256="11yd2x6ya3vgzy7lx3gxqz1q115wmb4aw0s1c6jyhkkqlf3rbyw4"; depends=[dplyr h2o lubridate magrittr openssl readr ReinforcementLearning stringr]; }; lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; - lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13"; sha256="1jpy0j52w8kc8qnwcavjp3smvdwm1qgmswa9jyljpf72ln237vqw"; depends=[numDeriv]; }; - lbfgsb3c = derive2 { name="lbfgsb3c"; version="2018-2.13-1"; sha256="1avk1srkp61dbjpgjhxq0w6q14y3jydmrywkab6kf1y6r3f4z20g"; depends=[numDeriv Rcpp RcppArmadillo]; }; + lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13.1"; sha256="15g465dy4izybmgmbgzmiyaxdfa6l1mcvyh6rc3hgapnlmnvb66m"; depends=[numDeriv]; }; + lbfgsb3c = derive2 { name="lbfgsb3c"; version="2019-11.26"; sha256="1wp4vhagh1pvvg6v7gayj7ljicipaa3jz4wbnml4fnzpwzp0irgv"; depends=[numDeriv Rcpp RcppArmadillo]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; lbreg = derive2 { name="lbreg"; version="1.2"; sha256="0wcw5w07fgmxwzmamf380l8vxw9fnxhbrhcwwfy6x87xby3bzr1b"; depends=[MASS]; }; - lcc = derive2 { name="lcc"; version="1.0.2"; sha256="10savjw28jv34xq9r7ry5dr1c96ghgqm9g93ybcas13dk3c23my3"; depends=[gdata ggplot2 gridExtra nlme]; }; + lcc = derive2 { name="lcc"; version="1.0.3"; sha256="0jvih9j6r8q26m3rjzng6sn2l41n5hgfsg2w298ac1v6asv3a1kn"; depends=[gdata ggplot2 gridExtra hnp nlme]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; lcmm = derive2 { name="lcmm"; version="1.8.1"; sha256="1n7g4m8r8n2zi53ah35gn0nx666fh6brbysgbsyb2yv4hjrf5v08"; depends=[survival]; }; @@ -9346,28 +9539,29 @@ in with self; { leafR = derive2 { name="leafR"; version="0.3"; sha256="0bb05y0py2q0qmvapbv3ibrycjb8i4adl25807i8l7g768y3llsr"; depends=[data_table lazyeval lidR raster sp]; }; leafSTAR = derive2 { name="leafSTAR"; version="1.0"; sha256="16zfaj0v6dx6mhy6m126lxa6w0dzfw4acm83jlbrizaz52amhv6a"; depends=[]; }; leafem = derive2 { name="leafem"; version="0.0.1"; sha256="0yjbwhxjifhf1yw3phc12hlrr080y4331dwgpxdg62x7v0y5xl31"; depends=[htmltools htmlwidgets leaflet raster sf sp]; }; - leaflet = derive2 { name="leaflet"; version="2.0.2"; sha256="051i5qmwa0zbk4jpjrx9kzk4g8qg9c3cavvhw19yj08fjhh8si7s"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; }; + leaflet = derive2 { name="leaflet"; version="2.0.3"; sha256="053kn4a2lbhzq2c68c4q782yrbyx4a7zw7j1s6p7k2d75chk1aja"; depends=[base64enc crosstalk htmltools htmlwidgets leaflet_providers magrittr markdown png raster RColorBrewer scales sp viridis]; }; leaflet_esri = derive2 { name="leaflet.esri"; version="1.0.0"; sha256="01bwzxh2rdhpvvazaxsji8axl765q1ix1fdxla6i61nvqkpw3dz1"; depends=[htmltools leaflet leaflet_extras]; }; leaflet_extras = derive2 { name="leaflet.extras"; version="1.0.0"; sha256="0li7651cwlz7sg04xdrmvhkrf0n6amaydck7gqz0wkb6wq8hcyzw"; depends=[htmltools htmlwidgets leaflet magrittr stringr]; }; - leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.4"; sha256="17lrchpry3in36jdkinsxs9lzqnx65xyk9g939knc8nmjw6z2j2r"; depends=[htmltools leaflet]; }; + leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.6.0"; sha256="175zxyvgjbhhp5fl8fz8nr7n9y34ldhs9pnz602x1hk7vpyf3cjc"; depends=[htmltools leaflet]; }; leaflet_opacity = derive2 { name="leaflet.opacity"; version="0.1.0"; sha256="19dkl105sf7c9wrpl8kzwsjwwc7r9qb4c1g85w2lavpj0pbyazxw"; depends=[htmltools htmlwidgets]; }; - leaflet_providers = derive2 { name="leaflet.providers"; version="1.8.0"; sha256="1rbx3n59hrbh3ncfzcv442shdyx64d67nlviisyfixvc1jlmjr2h"; depends=[htmltools]; }; + leaflet_providers = derive2 { name="leaflet.providers"; version="1.9.0"; sha256="0yynrwv4xd5cdh49cwvfxm4ranarah9iiry2cd3b4fiihdfcg3wy"; depends=[]; }; leafletCN = derive2 { name="leafletCN"; version="0.2.1"; sha256="1rg39n4bjacwss9nbdnz8y2zh8hxlc7a5ygndhjbmzajnbxfh09b"; depends=[htmltools jsonlite leaflet magrittr rgeos sp]; }; leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; }; leaflethex = derive2 { name="leaflethex"; version="0.1.0"; sha256="0wdph5xs2n7brdj7x1kgza0vxghl519hmva5xzkjc2yaj2dkpyrk"; depends=[dplyr htmltools htmlwidgets leaflet readr tibble]; }; leafpm = derive2 { name="leafpm"; version="0.1.0"; sha256="06d2k5x6bnv7bf4aw2bayi8sh5bw8z6akwnp7da5s7454hyqn0vv"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet sf]; }; leafpop = derive2 { name="leafpop"; version="0.0.1"; sha256="1bcab4f0g9xf7w5zh9xma93lv9ywbn9zqdy46k7cm0y6vnzggsy8"; depends=[base64enc brew gdalUtils htmlwidgets Rcpp svglite uuid]; }; leafsync = derive2 { name="leafsync"; version="0.1.0"; sha256="0p6pb7w5yz2wj33kdh7ixii9f6b8zv018psp6b7ifr7npgdxi3vx"; depends=[htmltools htmlwidgets leaflet]; }; + leaftime = derive2 { name="leaftime"; version="0.1.2"; sha256="0a653h0lhdw10j9yv0jsvaivj09fz1cjg3z9g3caja6c83w5c65q"; depends=[geojsonio htmltools htmlwidgets leaflet]; }; leanpubr = derive2 { name="leanpubr"; version="0.3.1"; sha256="0c8pmzn25cwv0wccf30zrrqrs5amlk8iqyyva9vp9976wzwgbxrx"; depends=[httr jsonlite xml2]; }; leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; leaps = derive2 { name="leaps"; version="3.0"; sha256="11gjmn1azrjw5xlvdb4gknj9985kck9x8zb9np1rnk2smp6pka2m"; depends=[]; }; learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; learnPopGen = derive2 { name="learnPopGen"; version="1.0.4"; sha256="04wxina3n2bspxdp3d4bgqrwyxqxx46pfp8zgzr3rsj89ml8if9l"; depends=[gtools phytools]; }; learningr = derive2 { name="learningr"; version="0.29.1"; sha256="0z3rs7y9yd81f14sbk3dwq1ifr4vca2s3kl1gnkqlns3dycgyp08"; depends=[plyr]; }; - learnr = derive2 { name="learnr"; version="0.9.2.1"; sha256="0jbk0g6fkw7zs8ykzhsvh9vvz8xmc4v03bqzjsa5mmpxpqan5vx5"; depends=[evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs rmarkdown rprojroot shiny withr]; }; + learnr = derive2 { name="learnr"; version="0.10.0"; sha256="0278q9nbkc4nb0rp930kjrwyidf0v7y38d1s187m4f4bs7ha82k6"; depends=[checkmate ellipsis evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs renv rmarkdown rprojroot shiny withr]; }; learnrbook = derive2 { name="learnrbook"; version="0.0.2"; sha256="1k17dk8ahn1ifwid1hhx0k7fpgc62zg82y66bbf6nhd4dgdbbv2p"; depends=[]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; - ledger = derive2 { name="ledger"; version="2.0.2"; sha256="0s0z4s4fmr8iz2d4xlrm5icqxbc5bmfrh60hmr5j0s3s7ynij8as"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; + ledger = derive2 { name="ledger"; version="2.0.4"; sha256="19jqy24c8xkpcs9d5w4a1ih474xpnxjnq1q8940mfkx1vq2bz1m5"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; leerSIECyL = derive2 { name="leerSIECyL"; version="1.0.2"; sha256="1zx28gpnys9mmhq7wwljfnq92wj1h1vxgqiirnfmn36z942nvmxl"; depends=[RCurl]; }; lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; }; legocolors = derive2 { name="legocolors"; version="0.2.0"; sha256="06jbq12jzga1p5jajhnnkk11s9gjw5ngmnrvhmbvirhsbafp0fjv"; depends=[]; }; @@ -9378,7 +9572,7 @@ in with self; { leri = derive2 { name="leri"; version="0.0.1"; sha256="1309v58xdw3p6y2wpnl64vgsds5kvfiary2a3fa041kz23jzbp3c"; depends=[ncdf4 raster]; }; lero_lero = derive2 { name="lero.lero"; version="0.2"; sha256="03ll7jzcay0swwpmxyf0y9k2h8mxx4p5v3ggm9dgdz4j99934l70"; depends=[]; }; lessR = derive2 { name="lessR"; version="3.8.9"; sha256="00k1ar4nnsj89zvsqp3b0nwyiwbprpgznzkn53d0csgrm473lwyf"; depends=[colorspace ellipse foreign lattice latticeExtra leaps openxlsx png rmarkdown robustbase sas7bdat triangle viridisLite wesanderson]; }; - lest = derive2 { name="lest"; version="1.0.0"; sha256="06ng0dpj37bhhwc34ilpks2ics97m9yjdpj4q993h3s2fn8kdgxw"; depends=[]; }; + lest = derive2 { name="lest"; version="1.1.0"; sha256="1d69kvdl31crv4ik8bwylq3s3f4skzrjc4x49c79w443g64n2jp9"; depends=[]; }; lestat = derive2 { name="lestat"; version="1.9"; sha256="1skxymdf3ncmdbskh7711xxgwsmwxfxnl52gcgw06jscx6s6wrsd"; depends=[MASS]; }; letsR = derive2 { name="letsR"; version="3.1"; sha256="0wyqqq7w21k87md3pwsz3kdaws345fdhh2xgavwiiywalg0gvxxx"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; lexRankr = derive2 { name="lexRankr"; version="0.5.2"; sha256="0vb4m4g88k05yhjla1gwp8ck08356r9dzwal6cq7lb6xm6pl5gvi"; depends=[igraph Rcpp SnowballC]; }; @@ -9404,7 +9598,7 @@ in with self; { librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.7"; sha256="1r548rvj98wl0yp6jx5d2qhvy1y4883qp0w3jjk97vp07a1cywn8"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0.2"; sha256="1gkcgbc8a7ks9x8mqmlz98hk55q3qy62izam7csz1s0r5dzsyqcr"; depends=[Rcpp RcppGSL]; }; - lidR = derive2 { name="lidR"; version="2.1.3"; sha256="0arpdqkkhh0dw23z8h4klm5kp8cmr3ci5sd4bla514zw482im1gy"; depends=[BH data_table future gdalUtils geometry glue imager lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; + lidR = derive2 { name="lidR"; version="2.1.4"; sha256="0qn2rf6h5ybx1qqri0cnb24iyylfv9hy8qm1lsbibssway9v8as2"; depends=[BH data_table future gdalUtils geometry glue imager lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.6"; sha256="0v8xrnmviq938x779f3h55iq8bhvbkwgz35v1dxgzbxwclj7jycl"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; lifecycle = derive2 { name="lifecycle"; version="0.1.0"; sha256="11rk7hkw63rfrf4aqmb4xrb88kg95xh8hajpjvjfwjym2v02h74n"; depends=[glue rlang]; }; @@ -9413,6 +9607,7 @@ in with self; { liftLRD = derive2 { name="liftLRD"; version="1.0-8"; sha256="1m24f4mc70l808cpkcdm91hzb5b3bkzibvgyfi9zs6cs8apcvmy3"; depends=[adlift nlt]; }; liftr = derive2 { name="liftr"; version="0.9.2"; sha256="0azi831c4f0vcq27a3q86vj90zvwrzcy4plhj9hqkk4qz8xw113x"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; liger = derive2 { name="liger"; version="1.0"; sha256="0vn49p8ldb7ss35by04qh7r1arn5w8gci1rqbyfqw8ignwjrdc7s"; depends=[matrixStats Rcpp RcppArmadillo]; }; + lightr = derive2 { name="lightr"; version="0.1"; sha256="0ijqsgszjgxp3xci6fr17krbzns6r0qyxna60ad85c5ri868rmzs"; depends=[pbmcapply xml2]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; @@ -9420,8 +9615,9 @@ in with self; { likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; lilikoi = derive2 { name="lilikoi"; version="0.1.0"; sha256="1v7xrkv8xxmq6cdww4z1p9vlvy71cqgd3yb5mal4v9w2wrfaps6z"; depends=[caret corrplot devtools dplyr e1071 gbm ggplot2 glmnet hash Hmisc infotheo Matrix pamr princurve pROC R_oo randomForest reshape2 RWeka stringr]; }; - limSolve = derive2 { name="limSolve"; version="1.5.5.3"; sha256="1ll6ir42h3g2fzf0wqai213bm82gpwjj2hfma2np3mz024sc09rg"; depends=[lpSolve MASS quadprog]; }; - lime = derive2 { name="lime"; version="0.5.0"; sha256="1xpzrdp6l6ndfg50cbbbrwpvfj4n0xll5cpam7cvq1s35rhpgnvm"; depends=[assertthat ggplot2 glmnet gower htmlwidgets Matrix Rcpp RcppEigen shiny shinythemes stringi]; }; + lillies = derive2 { name="lillies"; version="0.2.5"; sha256="0cqlxcq8yyw87m018hv8s82d6qmh9x93j0hyqycl6w5fdpp62hf0"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; + limSolve = derive2 { name="limSolve"; version="1.5.6"; sha256="1829rd2cnd8qj80z9a7sgc7gx4sf3kvl5g6d2a0lqqw30f9sjzmr"; depends=[lpSolve MASS quadprog]; }; + lime = derive2 { name="lime"; version="0.5.1"; sha256="021wz43dfc3f2k275c98hcnnx7dyyjj18dm2zf8vh7rbk9bnf0sj"; depends=[assertthat ggplot2 glmnet gower htmlwidgets Matrix Rcpp RcppEigen shiny shinythemes stringi]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; lin_eval = derive2 { name="lin.eval"; version="0.1.2"; sha256="05saxzzwh3gs6a4ii63n5kjm06p399xkyrjnqvn9f164322p7pwb"; depends=[broom]; }; linERR = derive2 { name="linERR"; version="1.0"; sha256="1mhiyqfpwagg161ncp5ndd22hlh12qzr360nms13rgyd8a077cq7"; depends=[survival]; }; @@ -9429,19 +9625,20 @@ in with self; { linbin = derive2 { name="linbin"; version="0.1.2"; sha256="0shw976nlryjvmvnyyiycchqs7zcg5flalywm1ymnv62nw3n55xs"; depends=[]; }; lindia = derive2 { name="lindia"; version="0.9"; sha256="1qma8wr0fkwx03x971crkh8cfc8z4374py1r1wvszj9wzi4vfp5r"; depends=[ggplot2 gridExtra MASS]; }; linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; + linearOrdering = derive2 { name="linearOrdering"; version="1.0.0"; sha256="1y9wcmcwbaqphzv8mk3xgk49pmd8m020zv3qmi85b5kzzqam1r4z"; depends=[]; }; linearQ = derive2 { name="linearQ"; version="2.0"; sha256="0sx7bx0x1k193day5w1dbmc09kn5741pcilxijjn2y5aijhd5wk9"; depends=[Rcpp stepR]; }; linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; - lineqGPR = derive2 { name="lineqGPR"; version="0.0.4"; sha256="1z7114c303cjh0wdbvsza5p0vsq6dz2kd425vg91r4bayhy4wd0k"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr quadprog restrictedMVN tmg TruncatedNormal]; }; + lineqGPR = derive2 { name="lineqGPR"; version="0.1.1"; sha256="180rvmpasdw8r3w5lw6dxg5jkj875dklvifi2msyp0vaq1nbpbwp"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr plot3D purrr quadprog tmg TruncatedNormal]; }; lineup = derive2 { name="lineup"; version="0.37-11"; sha256="0lk2wm8wsaaxw3j7yvmg6qif0r0s1jlwqyg73d3xjnjhxgy03zp4"; depends=[class qtl]; }; - lingtypology = derive2 { name="lingtypology"; version="1.0.14"; sha256="07pv6815a37nhab578zk677wzx8sbjf5ii4kvdg5q4jbrldmp5ia"; depends=[leaflet leaflet_minicharts rowr stringdist]; }; + lingtypology = derive2 { name="lingtypology"; version="1.0.15"; sha256="1iy33d29fdwpsw13094ykjijidhpcgkxqdqxfmlw4s6ma08sx4gh"; depends=[leaflet leaflet_minicharts rowr stringdist]; }; linguisticsdown = derive2 { name="linguisticsdown"; version="1.2.0"; sha256="1y2g8h0p4q4mjrawzyprsdw8ynqcbpnjypyhdaf03pcwqglcirkl"; depends=[DT knitr magrittr miniUI rstudioapi shiny stringr]; }; - link2GI = derive2 { name="link2GI"; version="0.3-7"; sha256="1zpl0lm8grcahyx4xd9axymqbja7v87p03jnhqjc8yih0227867x"; depends=[devtools R_utils roxygen2 sf]; }; + link2GI = derive2 { name="link2GI"; version="0.4-0"; sha256="00cvakpyl8jmj3d3lyap6b22kav6dkqj0r24w2h6nn5w9b9j3max"; depends=[devtools R_utils roxygen2 sf stringr]; }; linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; linkprediction = derive2 { name="linkprediction"; version="1.0-0"; sha256="0p2abdq6ad689236w2d0khlycpjgy6j7xrlb96ngl6csgxwm07bl"; depends=[igraph intergraph]; }; linkspotter = derive2 { name="linkspotter"; version="1.2.0"; sha256="0wk27jn8jr5rskjxbixshmp2dl0l74hrc8r6x3rvhy0x0b00zks2"; depends=[dplyr energy ggplot2 Hmisc infotheo mclust minerva pbapply rAmCharts shiny tidyr visNetwork]; }; - linl = derive2 { name="linl"; version="0.0.3"; sha256="0cl9p77c9702mzjv02yd7yj7lxwnwslibj0nk8p96glclsbyayl5"; depends=[knitr rmarkdown]; }; + linl = derive2 { name="linl"; version="0.0.4"; sha256="1wq0wm3k12sfvg0nzdsdxb4qc79kny7qvckxplfgaj6y62vcjxxl"; depends=[knitr rmarkdown]; }; linpk = derive2 { name="linpk"; version="1.0"; sha256="14l3vv507z7x63ziynp07902599syah0icvzq4rxfjf48bf96l63"; depends=[mvtnorm]; }; linprog = derive2 { name="linprog"; version="0.9-2"; sha256="1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"; depends=[lpSolve]; }; lintools = derive2 { name="lintools"; version="0.1.2"; sha256="18layj6a202p0sy9rs022fp0a6fwvixwwmwlyzn7h9kh4y9gvxjz"; depends=[]; }; @@ -9449,7 +9646,7 @@ in with self; { liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; liquidSVM = derive2 { name="liquidSVM"; version="1.2.4"; sha256="1fka0jbc200n0il1qbp5nb9819afi11b1ndwqpsd6bhfjgrcga8m"; depends=[]; }; lira = derive2 { name="lira"; version="2.0.1"; sha256="10bjmapnlw5z5cnbdpkwisvjkmk7zi9xqrvgmb5psj317zcxfc2p"; depends=[coda rjags]; }; - lisa = derive2 { name="lisa"; version="0.1.0"; sha256="042492w4gq3myqr6kpy272cxdmbr3lynja3ggrfzicvfbnrs6mzz"; depends=[]; }; + lisa = derive2 { name="lisa"; version="0.1.1"; sha256="1i5fbcac24rp8s7z2v23aqy7xv0p610zj5xfb6vscsvhdlvg4w1a"; depends=[]; }; lisp = derive2 { name="lisp"; version="0.1"; sha256="025sq46277q9i21189cbmx5dnrh5wfshc5k6la1wjilhr1iqf6nj"; depends=[]; }; lisrelToR = derive2 { name="lisrelToR"; version="0.1.4"; sha256="0zicq0z3hhixan1p1apybnf3v5s6v6ysll4pcz8ivygwr2swv3p5"; depends=[]; }; list = derive2 { name="list"; version="9.1"; sha256="17d8pscn56wlp6pcz2mvqjmrwv22fhphiiblrnfnd36m65nd58dm"; depends=[arm coda corpcor gamlss_dist magic MASS mvtnorm quadprog sandwich VGAM]; }; @@ -9458,12 +9655,12 @@ in with self; { listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.7.0"; sha256="0ma5jsri2zqkrlsm9nqpikl7imbwfy1glsmk13mblw0q245h49k1"; depends=[]; }; listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; - listviewer = derive2 { name="listviewer"; version="2.1.0"; sha256="09jkrrq4zyzgi66vkpm5n7isxpbckx5hjk39nik766hzarj5i7rs"; depends=[htmltools htmlwidgets shiny]; }; + listviewer = derive2 { name="listviewer"; version="3.0.0"; sha256="0zirxdj58h43062f68h6nqcgmpnvdglxx3kjbs4i4k0z9wvqhx8r"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.1.0"; sha256="0w3w9f6374qwvlrqknavqh9b38n5q1r6aw5zmz5lahvadalwdbwi"; depends=[assertthat DBI rappdirs RSQLite]; }; - litteR = derive2 { name="litteR"; version="0.4.1"; sha256="1348vljlm546j00bh9x8dfjjrvvclamx5cb7ik9bganj1i9dvjmk"; depends=[dplyr fs ggplot2 purrr readr rlang rmarkdown stringr tidyr yaml]; }; - littler = derive2 { name="littler"; version="0.3.8"; sha256="0g4aw031fsv69i7ah1g308dj0jsb9gpz0pbixji0agqqivhsf63a"; depends=[]; }; + litteR = derive2 { name="litteR"; version="0.6.6"; sha256="0f0djjv7b77zkfjdlh2afvhqs215lnd3nqc2rwl25jajyjhw6m0j"; depends=[dplyr fs ggplot2 purrr readr rlang rmarkdown stringr tidyr yaml]; }; + littler = derive2 { name="littler"; version="0.3.9"; sha256="1l0680icgj835hb1b8kanh2zx7cmy3yghglr75qilbvsd4anhxyz"; depends=[]; }; liureg = derive2 { name="liureg"; version="1.1.2"; sha256="1zhc5fs47whjvvwwiivykxfchzbjbldyvdmqh9rp7ccwba2q3956"; depends=[]; }; - live = derive2 { name="live"; version="1.5.10"; sha256="17wz3cs6pjghc31965wblm3lm3x1pr5bk5j1wi84vyyl0sni3qx4"; depends=[breakDown data_table dplyr e1071 forestmodel ggplot2 gower MASS mlr shiny]; }; + live = derive2 { name="live"; version="1.5.11"; sha256="08xyh6fnwnx7vlz9ldgslkqsnpwb0pdmmc77gl70dwh1c5v3w1gz"; depends=[breakDown data_table dplyr e1071 forestmodel ggplot2 gower MASS mlr shiny]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; llama = derive2 { name="llama"; version="0.9.2"; sha256="0knlmfddp70ddhjb9slyibbb9qj7pfybqccv3i4f545qxmmykj2n"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; @@ -9489,7 +9686,7 @@ in with self; { lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; }; lmerTest = derive2 { name="lmerTest"; version="3.1-0"; sha256="1nkz8cmxa5yb8q4i65bmhnn5pd4bhwcyjplyscynb24z3f64xp9b"; depends=[ggplot2 lme4 MASS numDeriv]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; - lmfor = derive2 { name="lmfor"; version="1.3"; sha256="1c97kgzgrn0mgb6a8m4c8875qi8li1z189fa463z826x3psrr40v"; depends=[nlme spatstat]; }; + lmfor = derive2 { name="lmfor"; version="1.4"; sha256="012bk6r6gf6y9skfch2pqr2irv70108sz1x6hakl1bifb4lgnbjp"; depends=[magic nlme spatstat]; }; lmm = derive2 { name="lmm"; version="1.2"; sha256="1xymcizqfqh2jp0rxgfgniflyqzgcwg04g9mllva5xgc1ydcg69k"; depends=[]; }; lmmen = derive2 { name="lmmen"; version="1.0"; sha256="0c1yy991bff1hp47rg89j5811l50kb9pdf76834jxh38dr3b4lsw"; depends=[glmmLasso glmnet lme4 lmmlasso mvtnorm quadprog]; }; lmmlasso = derive2 { name="lmmlasso"; version="0.1-2"; sha256="1mvd38k9npyc05a2x7z0908qz9x4srqgzq9yjyyggplqfrl4dgsz"; depends=[emulator miscTools penalized]; }; @@ -9509,6 +9706,7 @@ in with self; { loa = derive2 { name="loa"; version="0.2.45.4"; sha256="0dcpadv453885a2s8l064zn1xswi2v819154j822jr22kd7bj57v"; depends=[lattice MASS mgcv plyr png RColorBrewer rgdal RgoogleMaps sp]; }; loadr = derive2 { name="loadr"; version="0.1.2"; sha256="1zqg90hxw6c3k3gd0caj8fh5ym3f97gsr9cvi6ndlzqh4957cd5n"; depends=[]; }; lobstr = derive2 { name="lobstr"; version="1.1.1"; sha256="0vkif17825x33cz8r89j0qph4wj5l8fzfgl8nh2g7m2v140cxjdq"; depends=[crayon Rcpp rlang]; }; + locStra = derive2 { name="locStra"; version="1.1"; sha256="0wnis4x85hz5hsi8a9ii2gkbsx8lzp064gab2xdv0k8zizyj0dvk"; depends=[Matrix Rcpp RcppEigen Rdpack]; }; localICE = derive2 { name="localICE"; version="0.1.0"; sha256="0pch4mdn0bj3rlqsai3lqrkv6pw04238n9qvlwzwcwii3wyqhkgs"; depends=[checkmate ggplot2]; }; localIV = derive2 { name="localIV"; version="0.2.1"; sha256="09z5iqqa9ia4v88fbgf23ww8wxywpyndhzl5mhsp5dvpnj0vyhx1"; depends=[KernSmooth mgcv sampleSelection]; }; localModel = derive2 { name="localModel"; version="0.3.11"; sha256="1qy5qpczyp0dbnbfmznzn84cgakvlbsq6cgdn6r08dkdh339d6fb"; depends=[ggplot2 glmnet ingredients partykit]; }; @@ -9524,10 +9722,10 @@ in with self; { loe = derive2 { name="loe"; version="1.1"; sha256="1n16pgfxg9vcn729xxjbbvavg2ywbdcch9v2ph8nv3z7psc0q46c"; depends=[MASS]; }; log4r = derive2 { name="log4r"; version="0.3.1"; sha256="081fsfgs1shn2002hbvx974421s1294b2l9878q591a4gmv61n1n"; depends=[]; }; logKDE = derive2 { name="logKDE"; version="0.3.2"; sha256="09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q"; depends=[pracma Rcpp]; }; - logNormReg = derive2 { name="logNormReg"; version="0.2-0"; sha256="1mry2vqb9sqv17xw26k637w3i3zqjgayz2ql43rbz2f5248lm0yc"; depends=[]; }; + logNormReg = derive2 { name="logNormReg"; version="0.3-0"; sha256="172d0y9rb7j0d3m7d22ycfip6s8hk8hlp9810d7r95ra5dr5dx8z"; depends=[]; }; logOfGamma = derive2 { name="logOfGamma"; version="0.0.1"; sha256="0r7di0l646ycfmdjk8hli6b0v7qj0i8z3i8i7rwd3fsblb2q22vd"; depends=[]; }; logbin = derive2 { name="logbin"; version="2.0.4"; sha256="01gwfq9r2yy28iymxa402r8jp8km953cb5i60xnskcpzh8bv4rmf"; depends=[glm2 turboEM]; }; - logconcens = derive2 { name="logconcens"; version="0.16-4"; sha256="11bk03kjlb747g54axmb0nayz226g41xvanbw79aij76vjbglv7y"; depends=[]; }; + logconcens = derive2 { name="logconcens"; version="0.17-0"; sha256="0zrnyb25iyr3cm83b3xp21nipv1q0l1kp7nwjaja3173z7wwlvvr"; depends=[]; }; logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; @@ -9545,10 +9743,10 @@ in with self; { loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; logmult = derive2 { name="logmult"; version="0.7.1"; sha256="0y9z5l93hm8p3r1rd6g11miqg1a02b9hy5mgcxv2q0hm1pg2vh0q"; depends=[gnm qvcalc]; }; lognorm = derive2 { name="lognorm"; version="0.1.6"; sha256="05a6djz06jblnx51x2r5gwb57l4wq6giz6kknsslzsl64xj275z1"; depends=[Matrix]; }; - logspline = derive2 { name="logspline"; version="2.1.13"; sha256="1mhv23r7whragw2rg8hcwll2mki1z85mrp82zxn5pkljl5yndagh"; depends=[]; }; + logspline = derive2 { name="logspline"; version="2.1.15"; sha256="07ppq178la64yn34z7zk5wnz95s0k7fqixvsx8hx26g25adciq6z"; depends=[]; }; lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; }; lolog = derive2 { name="lolog"; version="1.2"; sha256="1vd80ngq4558ahan1vhsql0wc578imm13fgrrgnzlrd91xncnnjf"; depends=[BH ggplot2 intergraph Matrix network Rcpp reshape2]; }; - lomb = derive2 { name="lomb"; version="1.1"; sha256="08gzmrxl149p4wy8q3vs9impxqdf429q7lrg8j7g2r0k2yzm4rp7"; depends=[]; }; + lomb = derive2 { name="lomb"; version="1.2"; sha256="09cp9c33x14b4did8baq3hi0b3rb2nhasjz7aav03031c0fq07zj"; depends=[]; }; longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; }; longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; @@ -9561,7 +9759,7 @@ in with self; { longurl = derive2 { name="longurl"; version="0.3.0"; sha256="0ysa70zlkk3ybddj3yd3vbhjnkjbrisiz5a2hgbjx10p33m1r3am"; depends=[dplyr httr purrr]; }; loo = derive2 { name="loo"; version="2.1.0"; sha256="0zg8a11qhifg1p3hisxin1q47wlykjig4k3dz5zmflfihpps3x0v"; depends=[checkmate matrixStats]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; - loon = derive2 { name="loon"; version="1.2.2"; sha256="1mb6jys2pipac31x8a7rm265zvx1l11w1gl2b82afl8as2v7s90j"; depends=[gridExtra]; }; + loon = derive2 { name="loon"; version="1.2.3"; sha256="0h6vbsdp7m9wawjswzzpx7sq8q06xj9l1ln11vfwsyfnp4c66bfs"; depends=[gridExtra]; }; loon_data = derive2 { name="loon.data"; version="0.0.6"; sha256="01bd3w5xfr7lnbdhi9al5svlg7x3xs4l0jbqsrlamzc96izkm952"; depends=[]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; loopr = derive2 { name="loopr"; version="1.0.1"; sha256="1qzfjv15ymk8mnvb556g2bfk64jpl0qcvh4bm3wihplr1whrwq6y"; depends=[dplyr lazyeval magrittr plyr R6]; }; @@ -9578,7 +9776,7 @@ in with self; { lpc = derive2 { name="lpc"; version="1.0.2.1"; sha256="1g1dzm7pcrbrdk1dmhbdhj58j69dzar41al3i8q4gysf3adqzsvv"; depends=[]; }; lpdensity = derive2 { name="lpdensity"; version="1.0"; sha256="1rmddq8drvwdlqw9ggf3h8dcvx64hh6ha2v9zdxfjmi50zlcirg5"; depends=[ggplot2]; }; lpint = derive2 { name="lpint"; version="2.0"; sha256="0p1np8wlfbax0c7ysc5fs9dai8s00h1v0gan89dbd6bx06307w2r"; depends=[]; }; - lpirfs = derive2 { name="lpirfs"; version="0.1.5"; sha256="015009c930jilspmpk8w27lixda3mynqrlv1klss0xaj7ih286yq"; depends=[doParallel dplyr foreach ggplot2 lmtest plm Rcpp RcppArmadillo sandwich]; }; + lpirfs = derive2 { name="lpirfs"; version="0.1.7"; sha256="0s873vy9vbxbjrxrbwgz9nf483idqvjqbw35ns3h2sjpwhq5i60l"; depends=[doParallel dplyr foreach ggplot2 gridExtra lmtest plm Rcpp RcppArmadillo sandwich]; }; lplyr = derive2 { name="lplyr"; version="0.1.12"; sha256="1wcab8wwdzpgb61q83gfn2d34vsrd3qa4xyb9sqna6krss1ii1in"; depends=[bazar dplyr lazyeval magrittr]; }; lpme = derive2 { name="lpme"; version="1.1.1"; sha256="0si90nkgl8bqk8yvd2igdsrngiwqh8891072pfpzipifnd0f5448"; depends=[decon flexmix locpol Rcpp RcppArmadillo]; }; lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; @@ -9596,7 +9794,7 @@ in with self; { lsei = derive2 { name="lsei"; version="1.2-0"; sha256="1xl06fb3is744pxlh42wx5hn1h0ab1k31wnmsmh0524kxzcyp0a7"; depends=[]; }; lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; }; - lslx = derive2 { name="lslx"; version="0.6.8"; sha256="0x1xfgk0k77k3qvsqqi5cy73v1a2ra5rbfwvhm3wdjk928n1c9dv"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; + lslx = derive2 { name="lslx"; version="0.6.9"; sha256="0jfy6j5z53daarv8d8vqsgqdiy6s720m7qlcvrhicc8drvj88mrm"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; lsm = derive2 { name="lsm"; version="0.1.8"; sha256="0h7gyc4wb0y3hvs21h22l57czdd3xfycg400ncz5c9s63r47wzx3"; depends=[]; }; lsmeans = derive2 { name="lsmeans"; version="2.30-0"; sha256="1z35dzfgib0fk201gzjhgmnryhl3mkz50gz8g6nfv4mj9kzc5x5f"; depends=[emmeans]; }; lspartition = derive2 { name="lspartition"; version="0.4"; sha256="1n0pag5l4kx211dl5z9xbqijp7l04jcm0i6jgvkk2b0x9v32q4r5"; depends=[combinat dplyr ggplot2 MASS matrixStats mgcv pracma]; }; @@ -9604,6 +9802,7 @@ in with self; { lspls = derive2 { name="lspls"; version="0.2-2"; sha256="1cmffkyc881659l9m1miwhr3jfpwb0xb9n5chg317vcm8l9r4wcn"; depends=[pls]; }; lsplsGlm = derive2 { name="lsplsGlm"; version="1.0"; sha256="1qh68r033fwq1hc19h2srl1k6znvvvrcp38ghxadsksjfxllvniy"; depends=[]; }; lsr = derive2 { name="lsr"; version="0.5"; sha256="0q385a3q19i8462lm9fx2bw779n4n8azra5ydrzw59zilprhn03f"; depends=[]; }; + lss2 = derive2 { name="lss2"; version="1.1"; sha256="1rkv26zq36zyh891xkkllxphwplljmzpy15g619x1w4qvsajyyg8"; depends=[quantreg]; }; ltable = derive2 { name="ltable"; version="1.0"; sha256="1sx6bknbfkays899yq7wqpvc7izz757smaw9g9i7wii7d7a75plr"; depends=[]; }; ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.1-1"; sha256="1qrgzwx5l58qf5rfp1knxc84r0g943q5sdr3ky74zzwpnmrf2vf7"; depends=[MASS msm polycor]; }; @@ -9612,6 +9811,7 @@ in with self; { ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; ltsk = derive2 { name="ltsk"; version="1.0.7"; sha256="1swv5xk5mqmi20wn85a5978gdblmwbx22y3hzadivrk7q130r9w6"; depends=[fields gstat sp]; }; + ltsspca = derive2 { name="ltsspca"; version="0.1.0"; sha256="0hgl2zd8y01z8mhnqg1hlv1l7klpwhwk7q8b99pw9vgnh1f2gnfs"; depends=[pracma Rcpp RcppArmadillo]; }; ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; lubridate = derive2 { name="lubridate"; version="1.7.4"; sha256="14a823il77w3wmmnzr89vwrqp50y56dh5raycnaw6c8nv5xsh32i"; depends=[Rcpp stringr]; }; lucid = derive2 { name="lucid"; version="1.7"; sha256="0hrb8qlm8g4h1ziwxq7m53pf7g8fxhcb2xryavm6rniqpcx8yb7g"; depends=[nlme]; }; @@ -9639,11 +9839,11 @@ in with self; { mFilter = derive2 { name="mFilter"; version="0.1-5"; sha256="0anc93mciq8j64knd0i38sfgv10w1gd375wnfzn1fq8sj3lby7kb"; depends=[]; }; mGSZ = derive2 { name="mGSZ"; version="1.0"; sha256="08l98i75h2h8kx9ksvzp5qr8jhf0l6n4j7rg8fcn7hk8chn8v5zh"; depends=[Biobase GSA ismev limma MASS]; }; mHG = derive2 { name="mHG"; version="1.1"; sha256="1rz5ncrvvv9h9grls15apa63v2nh9j87fmp4mwjjil37jx6a5zki"; depends=[]; }; + mHMMbayes = derive2 { name="mHMMbayes"; version="0.1.1"; sha256="0dwywrnzdzkq48x2li9waj1yrm9r5b3qnksad42kf1bm28r1mdl5"; depends=[MCMCpack mvtnorm Rdpack]; }; mMPA = derive2 { name="mMPA"; version="1.2.0"; sha256="0g4zjknz52fpk7f436j95aw93aa8q2jwcrb1pqkm294kr276nnd9"; depends=[]; }; mQTL = derive2 { name="mQTL"; version="1.0"; sha256="0k80xvkr0b0mp3bj2s558fjxi2zf4k7ggnw6hsjm8lr84i108dks"; depends=[MASS outliers qtl]; }; mRMRe = derive2 { name="mRMRe"; version="2.0.9"; sha256="1zk09w9s8sc11j5cl0v93i09yn83f11diqib27rrph37aix2vs3p"; depends=[igraph survival]; }; - mRm = derive2 { name="mRm"; version="1.1.6"; sha256="1d897c5xflbkkj25hw15rd62nggv000cv2j481x0lhdgmgldjhrh"; depends=[]; }; - mRpostman = derive2 { name="mRpostman"; version="0.2.0"; sha256="16l6531s5ljas75gm2l744nwq134v61qrq1xjn4g26zbr1q1y3c9"; depends=[assertthat base64enc curl magrittr stringr]; }; + mRpostman = derive2 { name="mRpostman"; version="0.3.0"; sha256="18ky3xpgb4rns65574jr9fy8jwi6nrz6py9ai8nqf2r1s0bdmww3"; depends=[assertthat base64enc curl magrittr stringr]; }; mSTEM = derive2 { name="mSTEM"; version="1.0-1"; sha256="0mh09mqqpq9k8jrxs9d39009idld3b4y98ik75czdy580jmdg7mm"; depends=[doParallel foreach latex2exp]; }; mSimCC = derive2 { name="mSimCC"; version="0.0.1"; sha256="1f15r214srcdb4yacmy4hq890a674iqd2s7bry5dk20k46qdl026"; depends=[doParallel foreach]; }; maGUI = derive2 { name="maGUI"; version="2.3"; sha256="0dr0f90ldisqxklhysipbca6di7j6ks6an5k44g65h57b85z4n3q"; depends=[affy amap annotate beadarray Biobase BiocManager Biostrings Category convert genefilter GEOmetadb GEOquery globaltest GO_db GOstats graph gWidgets gWidgetsRGtk2 impute KEGGgraph KEGGREST limma lumi marray oligo pdInfoBuilder RBGL Rgraphviz RGtk2 RSQLite simpleaffy ssize WGCNA]; }; @@ -9680,18 +9880,19 @@ in with self; { makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; makedummies = derive2 { name="makedummies"; version="1.2.1"; sha256="062rvijhy2dybpgxzp44cg46bfyb8lp9yasv3mhskhf3yg717sqp"; depends=[tibble]; }; malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; - malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.4"; sha256="0hvbzknh4qv1d7by5pgyq85b1accinwx57f9a24jg4cw4307dncg"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; + malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.5"; sha256="1hz23b7yq8vq5ydj1xwazg1zkl4f4kykgy6qhh6v8mwk70yg4s1w"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; manet = derive2 { name="manet"; version="2.0"; sha256="1dnacgkdjmn7yiqk71qx5jgfipbpvqfdnrdd8wm0b9p8kgw4x7n4"; depends=[combinat igraph mclust MCMCpack]; }; mangoTraining = derive2 { name="mangoTraining"; version="1.0-7"; sha256="0lw46j44jhdcyh079a7zjmxcnv5c6qsfachinlwv3ild1gwggr3p"; depends=[]; }; manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; - manhplot = derive2 { name="manhplot"; version="1.0"; sha256="1dxqfdfr9iqlgwzn8sw5k1znj99h41z2fyrv54243nkf7yzcix0q"; depends=[ggplot2 ggrepel gridExtra reshape2]; }; + manhplot = derive2 { name="manhplot"; version="1.1"; sha256="17yw10gpfp6bqmilb09v61jd2amz6cv1z38si4nqnhbvmac065qd"; depends=[ggplot2 ggrepel gridExtra reshape2]; }; manifestoR = derive2 { name="manifestoR"; version="1.3.0"; sha256="1bxmlg6fmr4ky9m7b65rrylspwhwc8k9s1cbxnx9dyl33wh39ci6"; depends=[base64enc dplyr DT functional htmltools htmlwidgets httr jsonlite magrittr NLP psych tibble tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; manipulateWidget = derive2 { name="manipulateWidget"; version="0.10.0"; sha256="1zagrbwkn2d50zzw8i2vyb1hsq4cydmfsqiy1a2qlp6zrv8a6q9x"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny webshot]; }; manymodelr = derive2 { name="manymodelr"; version="0.2.2"; sha256="02jswli6k4m9662zf48maix28lr7w93rgwvzgm0nv1zf2mdrh6qb"; depends=[caret dplyr e1071 magrittr Metrics plyr purrr reshape2 tibble]; }; + maotai = derive2 { name="maotai"; version="0.1.1"; sha256="0g79mhm2cnr8pqhkh6xhi3dxws98i7pbcrw5ciixrghfjn5w7f16"; depends=[Matrix mclust Rcpp RcppArmadillo Rdpack RSpectra shapes]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapcan = derive2 { name="mapcan"; version="0.0.1"; sha256="1a4135wc1h4nzcv6xq0bg75i744wyq8p7q0ix7y2x2gb6s35w46k"; depends=[dplyr ggplot2 magrittr]; }; @@ -9699,15 +9900,15 @@ in with self; { mapdeck = derive2 { name="mapdeck"; version="0.2.1"; sha256="1slj4yrw7qir3cz70yqawbsz521n4614h6gjn0qpj75rj12wnxlk"; depends=[BH colourvalues geojsonsf googlePolylines htmltools htmlwidgets jsonify magrittr rapidjsonr Rcpp shiny spatialwidget]; }; mapedit = derive2 { name="mapedit"; version="0.5.0"; sha256="16rdksnkx6s7w92as896scfdnl1smp00fdnxmlz4ayym2a26wagb"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras leafpm mapview miniUI sf shiny]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; - mapi = derive2 { name="mapi"; version="1.0.0-62"; sha256="1czg2lqrlmp7fsm7908bwd4f9klq8d90z79zb1g80w2dlh5hb0nc"; depends=[data_table pbapply Rcpp sf]; }; - mapmisc = derive2 { name="mapmisc"; version="1.7.2"; sha256="0w0yvdnxk6gjcc86b6imq764va9f9hjan3ayw7qrbjpqx16fs7dx"; depends=[raster sp]; }; + mapi = derive2 { name="mapi"; version="1.0.1"; sha256="0qfwxrd0ya5amw7f96pfxf3f8m97s7vhaz62clqn083mw8ddaz2l"; depends=[data_table pbapply Rcpp sf]; }; + mapmisc = derive2 { name="mapmisc"; version="1.7.5"; sha256="0p9vpilyrz7ifhljqsbjvzgql01vl76y45day21n8517gsdwyvkd"; depends=[raster sp]; }; mapplots = derive2 { name="mapplots"; version="1.5.1"; sha256="18s2y66f8vi8g2r8a25zbgp2xm079r8v8qxv0w71h8krycs6vs9p"; depends=[]; }; mapproj = derive2 { name="mapproj"; version="1.2.6"; sha256="1rggww8cbwv0vzlj5afzhbsbngg4bzj5znbkz7wmxsbshfbsm9b2"; depends=[maps]; }; mapr = derive2 { name="mapr"; version="0.4.0"; sha256="169ah9v7cpw3hmaj6n575gi1zwazf4vh59n46zghb1x68nc2gqs0"; depends=[data_table ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; mapsRinteractive = derive2 { name="mapsRinteractive"; version="1.0.0"; sha256="0lpmizhaan7zp201wjaq544wadizwpswch7sn6m3sjwn8rswg6av"; depends=[gstat raster rgdal rgeos sp]; }; mapsapi = derive2 { name="mapsapi"; version="0.4.2"; sha256="1l7sp65ghdcli6ajkvlnhfizjq16mw2cmlf8jbif3al1vhbv4dvw"; depends=[bitops magrittr plyr sf xml2]; }; - maptools = derive2 { name="maptools"; version="0.9-5"; sha256="1pbvcn9xfx0hxq1ppbfg9xm5j04q4c15nj983yjmg7dlkzq135ax"; depends=[foreign lattice sp]; }; + maptools = derive2 { name="maptools"; version="0.9-9"; sha256="0v4llkxk8qs61vq4ykvaim4k23aagdaz0p62ns7zfq02sln3pfk9"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; mapview = derive2 { name="mapview"; version="2.7.0"; sha256="1cqa7hw7h0n6ing87bq903ax2m4iw82xb2jdgl55z9v9rdhxp0xh"; depends=[base64enc brew htmltools htmlwidgets lattice leafem leaflet leafpop png raster Rcpp satellite scales sf sp svglite uuid viridisLite webshot]; }; @@ -9718,6 +9919,7 @@ in with self; { marg = derive2 { name="marg"; version="1.2-2.1"; sha256="1r6rl7dhvm8dghm7pm4hfw3924qja65hczl6d47v9ixnv4rxyzr9"; depends=[statmod survival]; }; margins = derive2 { name="margins"; version="0.3.23"; sha256="1gn18bmz7zwdv5fm62g4kj1x0y4lzhwvwgk4xc9hfi2mh5w08j4f"; depends=[data_table MASS prediction]; }; marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; + marindicators = derive2 { name="marindicators"; version="1.0.0"; sha256="1id055jc624n34vxb68gdy2kgfsm5y61dkfskzhlrwq9d5npxv6m"; depends=[]; }; marinespeed = derive2 { name="marinespeed"; version="0.1.0"; sha256="1r9bpggb88px8149dsga3xmkjhjq6ybs6a5kp60qz28iyr183mar"; depends=[bit geosphere sp]; }; markdown = derive2 { name="markdown"; version="1.1"; sha256="06zwbrp14bri3470anadd7dvgmw06xf8df6v2pk64wx3f9sd934d"; depends=[mime xfun]; }; marked = derive2 { name="marked"; version="1.2.1"; sha256="138m1clidyhahpz111iblff2w44m8zp0302vcj46frk1c60c46qi"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; @@ -9731,7 +9933,7 @@ in with self; { mason = derive2 { name="mason"; version="0.2.6"; sha256="01ppc7f18kf4xv4lrhib0cfm85v658grmxpny3h3kdb4pi4rbspy"; depends=[broom dplyr lazyeval magrittr tidyr]; }; mastif = derive2 { name="mastif"; version="1.0"; sha256="1xxfql4d298ib9h8821jp717a60vgxq7nzs08yb3xyzp0c3djja2"; depends=[corrplot RANN Rcpp RcppArmadillo repmis xtable]; }; matR = derive2 { name="matR"; version="0.9.1"; sha256="1qw2vqmpq7gc3dmr9r000ccjj7xa0h82waxnvryz3l17ggryyjjm"; depends=[BIOM_utils MGRASTer]; }; - matahari = derive2 { name="matahari"; version="0.1.0"; sha256="004dqixbb5azdv52wcglb3p7yc41nyn3fhf7yrvcpclaqizggamy"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; + matahari = derive2 { name="matahari"; version="0.1.1"; sha256="0lsqgxglfvk9p6zyd1m377z3jygvrm2dvrnw0bd6kpadycc8p5cb"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.7"; sha256="0k5psmjzcyr7pm603vni7w2hvslck05r81cngm26pql2prdrv5yk"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; matchingMarkets = derive2 { name="matchingMarkets"; version="1.0-1"; sha256="0c2jaccjdwgnx39jgak35hanaxq301h3qaj90xivlr9dk8xg19qx"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; @@ -9750,18 +9952,19 @@ in with self; { matrixProfile = derive2 { name="matrixProfile"; version="0.5.0"; sha256="0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g"; depends=[fftw signal TTR zoo]; }; matrixStats = derive2 { name="matrixStats"; version="0.55.0"; sha256="06fvx0rlaz80k0lkqq2n7v0309xpz7h7ss0m9kgyikp4xs8bvmhn"; depends=[]; }; matrixStrucTest = derive2 { name="matrixStrucTest"; version="1.0.0"; sha256="06la9xmpi1viyjml4m1akbna3lwkz5lnq95v1nnf73i9zpfwz03k"; depends=[]; }; - matrixTests = derive2 { name="matrixTests"; version="0.1.6"; sha256="0kc7qh0a0m598irpbgd78h8rks3sp497w8klcr2wgm6q29dfm4c7"; depends=[matrixStats]; }; + matrixTests = derive2 { name="matrixTests"; version="0.1.7"; sha256="1p0bdy783nj9c94nqwi3vx02rsfsvsjms086mxzhz6icn53l54ch"; depends=[matrixStats]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; matrixpls = derive2 { name="matrixpls"; version="1.0.5"; sha256="04sshb88rq2mp3y4rrs6nkzr4kc380vx380r911c7j975l55a183"; depends=[assertive lavaan MASS matrixcalc psych]; }; matrixsampling = derive2 { name="matrixsampling"; version="2.0.0"; sha256="05dbn7rj07jx1hj7i6k3akf11hysxg6v32kav9fvsqmiy2zkippa"; depends=[keep]; }; matsbyname = derive2 { name="matsbyname"; version="0.4.10"; sha256="004947nqy3mps34ym506y8q31awfca7g2y2d4wdq7kncxdk4a388"; depends=[dplyr Hmisc magrittr]; }; - matsindf = derive2 { name="matsindf"; version="0.3.0"; sha256="0bvy81wj5hhgqqdyvnzk4vn883zxxzppzvrralkj6ag7q17d07dj"; depends=[dplyr magrittr matsbyname purrr rlang rlist tibble tidyr]; }; + matsindf = derive2 { name="matsindf"; version="0.3.1"; sha256="18pbc00z8djmbmdzfg3s2n9k48xp8bllab17a93ngwa69cqm1mxg"; depends=[dplyr magrittr matsbyname purrr rlang rlist tibble tidyr]; }; mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; + mauricer = derive2 { name="mauricer"; version="2.0.5"; sha256="01x1cigwr95hzyz1pm9w5xi2j9z4zf54p6bwhn0y865gln80wvnz"; depends=[beastier stringr]; }; maxLik = derive2 { name="maxLik"; version="1.3-6"; sha256="0jlj8g7pm3caa4r7slwqd9rfrh7sn22g36dgynmcaw3dfwj23scm"; depends=[miscTools sandwich]; }; maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; maxadjAUC = derive2 { name="maxadjAUC"; version="0.1.0"; sha256="04zdaqmavhhrj63s2k5pqncvlzbfnxan7r0fagfka9dypwwcl5qm"; depends=[aucm Hmisc Rsolnp survival]; }; - maximin = derive2 { name="maximin"; version="1.0-2"; sha256="1gg19x73kl1yghak9lx3fq0yl8vcpvcxqzfs6qqlky502ygcv96n"; depends=[plgp]; }; - maxlike = derive2 { name="maxlike"; version="0.1-7"; sha256="0gi33hcjj456sjw7l3q4n46k4cb6m3ml3ycd93pnajxacl24swbb"; depends=[raster]; }; + maximin = derive2 { name="maximin"; version="1.0-3"; sha256="1wfhpgk149aw6gkdlr8g29icj0l0xa8fczxkz4hbdr91dqmnxvp3"; depends=[plgp]; }; + maxlike = derive2 { name="maxlike"; version="0.1-8"; sha256="0lbj212dbx8lbkw808xlhniw5864bh86xs8zwvxcnngj0abapalh"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; maxstat = derive2 { name="maxstat"; version="0.7-25"; sha256="114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg"; depends=[exactRankTests mvtnorm]; }; @@ -9770,13 +9973,14 @@ in with self; { mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; }; mbbefd = derive2 { name="mbbefd"; version="0.8.8.5"; sha256="1bnbavhii2wm9944l4j5x21y9b3kp0sdshz32r1k7cy1y569zd6r"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; + mbend = derive2 { name="mbend"; version="1.2.3"; sha256="0w1rrj1zcbvi8nlspzqa8142ilvbw9q6m26kmxqcp9mvqzbnbd30"; depends=[]; }; mbest = derive2 { name="mbest"; version="0.6"; sha256="1x0f7y5hj6a35wq1xn6g7jyjn9c4zryahwlf07qrypgrcnj2m8vx"; depends=[abind bigmemory foreach lme4 logging nlme]; }; mbgraphic = derive2 { name="mbgraphic"; version="1.0.1"; sha256="1f5zzm9xv6c4qid75r4pww4cqclk664m5xm5p72yb9ijiwc77cy1"; depends=[diptest dplyr energy GGally ggplot2 gridExtra hexbin magrittr mgcv Rcpp scagnostics scales seriation shiny]; }; mbir = derive2 { name="mbir"; version="1.3.5"; sha256="10sd5gk2k94cmi49nbpywqvh9bxj9q3psa3d00zmw1a7d6c0jjpd"; depends=[effsize psych]; }; mblm = derive2 { name="mblm"; version="0.12.1"; sha256="1fipb3bryaimr30lcxsxrn0ymv24z39swca7s4z7p9xcfg3ban1b"; depends=[]; }; mbmdr = derive2 { name="mbmdr"; version="2.6"; sha256="0ss5w66hcgd8v8j9bbbp12a720sblhr2hy9kidqfr8hgjaqlch86"; depends=[logistf]; }; mboost = derive2 { name="mboost"; version="2.9-1"; sha256="02ia3y0fxfjl02fb1nnl93j640fyl18jm15cgxyybhf27w4jdvb7"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; - mboxr = derive2 { name="mboxr"; version="0.1.6"; sha256="11fakbrhpphjbc4p0src0f3l39dillhbz8030cc79zdann9jfp4p"; depends=[dplyr lubridate magrittr purrr reticulate tibble]; }; + mboxr = derive2 { name="mboxr"; version="0.2.0"; sha256="1d11fpz17k65dzw9sjc7zfs1jpajzrh2pvr2s435p83g3mpf40vz"; depends=[dplyr lubridate magrittr purrr reticulate stringr tibble tidyr]; }; mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; mc_heterogeneity = derive2 { name="mc.heterogeneity"; version="0.1.0"; sha256="1jrj7kkykhw9qj71cfjrn5gbm3qyrbdcc4cj3mfz62wlvny18233"; depends=[metafor]; }; mc2d = derive2 { name="mc2d"; version="0.1-18"; sha256="1ljw8ms661bsdqbfpjvvrif9n0c2i6lzxyqj4rxhxsp3dj18w3g3"; depends=[mvtnorm]; }; @@ -9788,7 +9992,7 @@ in with self; { mcbiopi = derive2 { name="mcbiopi"; version="1.1.6"; sha256="1caw2sy15hw2zw0bdynwnsa7hn4rly34hlxp06nwm5lssz8l2597"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; mcca = derive2 { name="mcca"; version="0.6.0"; sha256="0frac86ahljc0pamky1zds32amh3sadd1299x8k7qcfmlv1rh4ym"; depends=[caret e1071 MASS nnet pROC rgl rpart]; }; - mccf1 = derive2 { name="mccf1"; version="1.0"; sha256="1d8dw3kb2p3n3kgpihbxmwvg4blvaiss4s09452xz0d1gkjk4y01"; depends=[ggplot2 ROCR]; }; + mccf1 = derive2 { name="mccf1"; version="1.1"; sha256="023pvjfc1iv7hac3gz5rakg6ljs92j0qfm4givad5iiwv5n4k3zr"; depends=[ggplot2 ROCR]; }; mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; mccmeiv = derive2 { name="mccmeiv"; version="2.1"; sha256="1lkghvvwxvg474p37h1mpbackr5qmy05qkx8yiq4x066wrfq1w1i"; depends=[MASS numDeriv survival]; }; mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; }; @@ -9816,7 +10020,7 @@ in with self; { mcprofile = derive2 { name="mcprofile"; version="0.2-3"; sha256="0rakaa1p6z0p4jl4df357vi58wzph81ik6plc8zzl370r8mj1y8q"; depends=[ggplot2 mvtnorm quadprog]; }; mcr = derive2 { name="mcr"; version="1.2.1"; sha256="0237w41xichd418ax9xviq4wxbcc6c0cgr5gvzkca67nnqgc4jaz"; depends=[]; }; mcsm = derive2 { name="mcsm"; version="1.0"; sha256="13sx7s3ywis5n4a70ld2szld9fb8jkfsc82dy6iskhy17vy8pml0"; depends=[coda MASS]; }; - mctest = derive2 { name="mctest"; version="1.2"; sha256="0rsyqdfsmyvjgns7z2vj24n91ziaz45q4vidk48ay3acfam8i274"; depends=[]; }; + mctest = derive2 { name="mctest"; version="1.2.5"; sha256="1brqa8rvb5jvwmjz4wms7rhzv9xpvqydzkjm46ckz9fsiwrkq5mf"; depends=[]; }; md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; md_log = derive2 { name="md.log"; version="0.1.1"; sha256="0ix5nz38xzlhrga40hfhlfss938mrfbni2wysvz2qbpm59qxrhg0"; depends=[futile_logger]; }; mda = derive2 { name="mda"; version="0.4-10"; sha256="19g6kn6g0shidrjfffklbmzc5w7mcimrxhagx4nmpslg59ibqdkh"; depends=[class]; }; @@ -9829,11 +10033,10 @@ in with self; { mdmb = derive2 { name="mdmb"; version="1.3-18"; sha256="0jvwwdblky080j8cwfjna2d11z7hr672cdw9bkjz7ngd44blyp8x"; depends=[CDM coda miceadds Rcpp RcppArmadillo sirt]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; mds = derive2 { name="mds"; version="0.3.0"; sha256="098ynvwra7ylli1pklmmfl9xnmiyd13iw5zd7g2xlqmg3rrphysg"; depends=[lubridate parsedate]; }; - mdsOpt = derive2 { name="mdsOpt"; version="0.4-2"; sha256="1f31d3snn99bzcc4rh8dmasis9nag3q3gvbc43733q6izcjq0aa9"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; + mdsOpt = derive2 { name="mdsOpt"; version="0.4-3"; sha256="0chk95n8gvj8jxvqq3bkdsw3hjaizcqd0x2lk32rkaq52lp3l9d8"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; mdsr = derive2 { name="mdsr"; version="0.1.7"; sha256="1angy75nyhzwfhmb4axs14yl0jsxjaiqh5nz2jpmi5j890y32zda"; depends=[babynames DBI dbplyr downloader dplyr fs ggplot2 mosaic RMySQL]; }; - mdsstat = derive2 { name="mdsstat"; version="0.3.1"; sha256="1nbdyxlk1kv2hjr281z3rw42ddq7v19vnh8jg0yxyvp466d1yi24"; depends=[lubridate mds Sequential]; }; mdw = derive2 { name="mdw"; version="2017.12-03"; sha256="054vssnypbik0yf6smicggnkrqf6kx8k21nbf5rminsh00sx39k1"; depends=[]; }; meaRtools = derive2 { name="meaRtools"; version="1.0.4"; sha256="1nxyvdq4670696mhg0svxxlvk9hnr8szai8b18pw6754kmw1bjvn"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; meanShiftR = derive2 { name="meanShiftR"; version="0.53"; sha256="1pla9hr9nbbnc3hcmk0ywfh6129zng5lp3dmjqb3cgdrmwkdrx9i"; depends=[]; }; @@ -9847,7 +10050,7 @@ in with self; { medfate = derive2 { name="medfate"; version="0.8.2"; sha256="0f86cpczzkpx8sy6krx970zy1fmsn93mjkm9mq00w2nw91kqjrh6"; depends=[ggplot2 GSIF meteoland Rcpp sp spdep]; }; medflex = derive2 { name="medflex"; version="0.6-6"; sha256="04cjqhyihxf1imbl9y9s58qpy6lmxsh2gwy4bras03hx52slzl5r"; depends=[boot car Matrix multcomp sandwich]; }; mediacloudr = derive2 { name="mediacloudr"; version="0.1.0"; sha256="1r11mpz44msla71lqw45r9s8z7rwvbnqi026l0ljx6crby183h0w"; depends=[httr jsonlite rvest xml2]; }; - mediation = derive2 { name="mediation"; version="4.4.7"; sha256="0nd4nli1qsvhgf404v1y16bc8q7axmpzyhbn38vncranb6lc235l"; depends=[Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; + mediation = derive2 { name="mediation"; version="4.5.0"; sha256="0i88wvqqw8cmxmh9i78rqzp4s16zhf12dgl9fsk9bhw7hxhhc0i1"; depends=[boot Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; medicalrisk = derive2 { name="medicalrisk"; version="1.2"; sha256="1zdxv3rj7768kbyxfvr9n0hp4z7y0sf3r7ssqv731hjjp656l6xp"; depends=[hash plyr reshape2]; }; medicare = derive2 { name="medicare"; version="0.2.1"; sha256="00a1gml2khzisdavnaip6ap4bw45b17nbl9cqb1mqrm4y0p9gm16"; depends=[]; }; meditations = derive2 { name="meditations"; version="1.0.1"; sha256="0wnx3zadpngfch0sb0ifqvsmzl613639f1yazwsgvhk29mycx4ss"; depends=[]; }; @@ -9864,10 +10067,10 @@ in with self; { meme = derive2 { name="meme"; version="0.2.2"; sha256="1q78q8080vvqni8ncqp326pidfjfia0f2b6pis08m7fr1q1gcqca"; depends=[ggplot2 gridGraphics magick showtext sysfonts]; }; memery = derive2 { name="memery"; version="0.5.2"; sha256="1hr52g69lr2n84yczm8i8yxh7rys5nr8jk1hcmv548p5y79l8k9s"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0.1"; sha256="1x3vf2f1yh40xw5vqcjlrn07zn9zh3sx4kc9dijxzygd9crl5a29"; depends=[ade4 gdistance raster vegan]; }; - memisc = derive2 { name="memisc"; version="0.99.17.2"; sha256="0w3pjgf7vr26gcva2hcrh9kab70bcnpc1nz4lxjxr9sywm7czmav"; depends=[lattice MASS repr]; }; + memisc = derive2 { name="memisc"; version="0.99.20.1"; sha256="1x0vm115m02zwq45knlkrwis21swkwcwl19fhqa59vmncrmzjsqy"; depends=[lattice MASS repr]; }; memnet = derive2 { name="memnet"; version="0.1.0"; sha256="1lhpij3dm4whsawy6cxcfcwn9q881i8jbjpkrwvdsn63ibxrm55s"; depends=[BH igraph Rcpp]; }; memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; - memochange = derive2 { name="memochange"; version="1.0.0"; sha256="1hisd1f4chcavhw4rnalz1wj16rnd12p1fxmvghmj8gcnm4b5sx2"; depends=[fracdiff longmemo LongMemoryTS sandwich strucchange urca]; }; + memochange = derive2 { name="memochange"; version="1.1.0"; sha256="1im6342by0pf1kmz8jps9d3y752k87bl02v5ddywbvh0idkdnba5"; depends=[forecast fracdiff longmemo LongMemoryTS sandwich strucchange urca]; }; memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; memor = derive2 { name="memor"; version="0.2"; sha256="10w2jw9ma7yds2d179l7bv4rzpggp3l04kvqnncii6yf5f4lj9cd"; depends=[knitr rmarkdown yaml]; }; memoria = derive2 { name="memoria"; version="1.0.0"; sha256="05nx6xkgf1mkn1ajjizwp66xhn7ddbvgdnmkdbcl4s7sq456vczw"; depends=[cowplot ggplot2 HH ranger stringr tidyr viridis viridisLite zoo]; }; @@ -9880,9 +10083,9 @@ in with self; { merlin = derive2 { name="merlin"; version="0.0.1"; sha256="14k8kz8icj3wgd3li83v0wfl61pdc97r7qjcsmmc5srp36kbw1i9"; depends=[MASS randtoolbox statmod survival]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; messaging = derive2 { name="messaging"; version="0.1.0"; sha256="0q19cqp1zgh0yhk1ql0jqf414bhx6jwhkairq6wx2cmkli2g7k1y"; depends=[dplyr glue magrittr rlang stringr]; }; - metR = derive2 { name="metR"; version="0.4.0"; sha256="1j4y2nn2r1i29h2invid8s695nv7b1lfanqspc281gjkrkns77ps"; depends=[checkmate curl data_table digest dplyr fields Formula formula_tools ggplot2 gridExtra gtable lubridate maps maptools Matrix memoise plyr purrr RCurl scales sp stringr]; }; + metR = derive2 { name="metR"; version="0.5.0"; sha256="0dpbzyawswlvzydx54i4f75zv79qww1p5hk1p4pzjc7fmgx9ba57"; depends=[checkmate curl data_table digest dplyr fields Formula formula_tools ggplot2 gridExtra gtable lubridate maps maptools Matrix memoise plyr purrr RCurl scales sp stringr]; }; metRology = derive2 { name="metRology"; version="0.9-28-1"; sha256="1syjwblyd18myxrs0hx4m91fgb6zs3r4g7w701j2f2pw6j9mvz0y"; depends=[MASS numDeriv robustbase]; }; - metScanR = derive2 { name="metScanR"; version="1.2.2"; sha256="07j9y54z039gnrp8w6xi0xj4xzl8x2qjlzgf4nh9frmwqd6cld2i"; depends=[geosphere leaflet matlab plyr RCurl]; }; + metScanR = derive2 { name="metScanR"; version="1.2.3"; sha256="1v7zrxj3wspx6f5n5s75skcygbf3r85rn4p0z9iwbrbrgxwi4qgs"; depends=[geosphere leaflet matlab plyr RCurl]; }; meta = derive2 { name="meta"; version="4.9-7"; sha256="0fwas40007sm6x6zf7vv8527qj7kq6h6amqsyl68nilvwfg4d0ap"; depends=[lme4 metafor]; }; meta4diag = derive2 { name="meta4diag"; version="2.0.8"; sha256="1ila8x9r1rdmlwfpzfx1zj5yx1m4yrbhyb74db4wqbh1dswn7zsm"; depends=[caTools shiny shinyBS sp]; }; metaBLUE = derive2 { name="metaBLUE"; version="1.0.0"; sha256="0ppn4bvr10z32pghmv4wjv86k6n5y5bkfxc6h5mvb556v6jnl6d8"; depends=[Matrix]; }; @@ -9893,11 +10096,12 @@ in with self; { metaMix = derive2 { name="metaMix"; version="0.3"; sha256="17qkwg9iz5v63ybyvqppbf044l0pi0ym5pw283174dlx8lfac60q"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRMST = derive2 { name="metaRMST"; version="1.0.0"; sha256="1mq9j7iczjh7d3cps9g1bh0f8k388bdn8d5lkjs2s8y9fq1kxzmx"; depends=[meta mvmeta rstpm2 survival survRM2]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; }; - metaSEM = derive2 { name="metaSEM"; version="1.2.2"; sha256="09riif6ia0si97zn8kcx23k40iyj38vfvli73y0044npymirz2sx"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; + metaSDTreg = derive2 { name="metaSDTreg"; version="0.2.0"; sha256="08q2llzqakrrxab73a63s4bpqq461m4q1dl60za9826yxl3g86b8"; depends=[Matrix maxLik ordinal truncnorm]; }; + metaSEM = derive2 { name="metaSEM"; version="1.2.3"; sha256="13bny83pnd0mwz6bcnvpnn9bipvzj7ifwsx1z145gs5arx7k7dsh"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; metaboGSE = derive2 { name="metaboGSE"; version="1.2.1"; sha256="169m59y2g3618rpjjlmwsj1alkfcjfhpsyzhz9010vn38bbwgmxr"; depends=[AnnotationDbi ape Matrix sybil sys topGO]; }; metacart = derive2 { name="metacart"; version="2.0-1"; sha256="1dv4vq3pxbmjg8xxjjxxqnl3njy4v7j20ha90sj1i2dd814y0r72"; depends=[ggplot2 gridExtra Rcpp rpart]; }; metacoder = derive2 { name="metacoder"; version="0.3.3"; sha256="0d7fpx5zpggc8k3y882mlw4szn7ghzckyiaxj9x652xink8zi397"; depends=[ape biomformat cowplot crayon dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr svglite taxa taxize tibble traits vegan viridisLite zoo]; }; - metacom = derive2 { name="metacom"; version="1.5.1"; sha256="18n3mbmjna3db44gscsdgv1j8f11jhikiw7yg3vbw2a9v5w3ypkv"; depends=[vegan]; }; + metacom = derive2 { name="metacom"; version="1.5.2"; sha256="0v2rscql8vks12v5s9rvfrylh175if2mnpr69wsvr2snlcjxmirq"; depends=[vegan]; }; metacor = derive2 { name="metacor"; version="1.0-2.1"; sha256="0y3z7jbhw5c2dbn9fx9wlw1311irjc2xvnm5hnaixbbj53qz24n0"; depends=[gsl rmeta]; }; metadynminer = derive2 { name="metadynminer"; version="0.1.6"; sha256="0zg08lwnimnmfwac0d5kg8yhsl88gmn029dra18phy1jzkfnsx34"; depends=[Rcpp]; }; metadynminer3d = derive2 { name="metadynminer3d"; version="0.0.1"; sha256="0riqr2hhk4h0rm7m4njb2dd2f24jff7lzf9chh83sq4q3wldgpz5"; depends=[metadynminer misc3d Rcpp rgl]; }; @@ -9912,7 +10116,7 @@ in with self; { metamedian = derive2 { name="metamedian"; version="0.1.4"; sha256="00jzgf8zdcbgnz89g55lq9c6ybh3praa68b9wwj6sx63hnkicvgd"; depends=[estmeansd Hmisc metafor]; }; metamer = derive2 { name="metamer"; version="0.2.0"; sha256="0wdhr83mph9v7vb9mfhf7lcwmp0smz72sniass7kxcbj6j9hga4g"; depends=[FNN progress]; }; metamicrobiomeR = derive2 { name="metamicrobiomeR"; version="1.1"; sha256="16ymdhhr7h2785gfgrw7qi1fjvawiz599h42qi7l0v6djinbxlw2"; depends=[caret compositions dplyr foreign gamlss gdata ggplot2 gplots gridExtra httr jsonlite knitr lme4 lmerTest magrittr matrixStats meta mgcv plyr randomForest RColorBrewer RCurl repmis reshape2 rmarkdown tidyr zCompositions]; }; - metamisc = derive2 { name="metamisc"; version="0.2.0"; sha256="052hvnf9dvz9x8jbq7358jgg23iw4zpx7yqdrbrl1gdyahn0k75g"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; + metamisc = derive2 { name="metamisc"; version="0.2.2"; sha256="0ll245a3f442n7jyjshcn87l725mgk132ri73kynrwh0z8g2r7i5"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; metansue = derive2 { name="metansue"; version="2.3"; sha256="18vy294862lfgxiw9cikai9svy3wpwk2bvz3vp20fcslg90mn3xp"; depends=[]; }; metap = derive2 { name="metap"; version="1.1"; sha256="10kv7z8pik5iy374h399vws0ldf41y2nczlwh8axqf9dcwl084i0"; depends=[lattice Rdpack]; }; metaplot = derive2 { name="metaplot"; version="0.8.3"; sha256="1zw8bq2fy9m15dfc92ag0dz2k9dqrf5jbvfaycizcgsgaqd79s1c"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; @@ -9929,8 +10133,9 @@ in with self; { meteo = derive2 { name="meteo"; version="0.1-5"; sha256="0n37plka9vsxwd03lca3h6m8dcz3f1bi46jn3bz7vyilnkq9hcdk"; depends=[gstat plyr raster rgdal snowfall sp spacetime]; }; meteoForecast = derive2 { name="meteoForecast"; version="0.53"; sha256="15bjhkcn4zcll3cfgpzcdj0zv753x29qsjndy3h2zzqn83qywx9s"; depends=[ncdf4 raster sp XML zoo]; }; meteogRam = derive2 { name="meteogRam"; version="1.0"; sha256="167gyxjnl4dyfqs3znv8sdpkvpqdxzdqi1g730s30gycrm9snap9"; depends=[ggplot2 RadioSonde]; }; - meteoland = derive2 { name="meteoland"; version="0.8.1"; sha256="1896cqfm8c2ck4w5fkvjwi9kxf713r9bxfjsakv10ii02r78hk95"; depends=[httr jsonlite ncdf4 ncdf4_helpers Rcpp rgdal sp spdep]; }; + meteoland = derive2 { name="meteoland"; version="0.8.3"; sha256="0xbnb5kpb565ivi1qx2jmbgx5zg3bv65q4a7aylhdxijsjdr8vcv"; depends=[httr jsonlite ncdf4 Rcpp rgdal sp spdep]; }; meteor = derive2 { name="meteor"; version="0.3-4"; sha256="01009d9wpxybig4n82m48hqqg1k4x4shcjxfy8y0kk7cgfdb4naw"; depends=[Rcpp]; }; + meteorits = derive2 { name="meteorits"; version="0.1.0"; sha256="0b2rpq03wijmnqbdbdm10nzh19zvqhfcwnnph2f94ibsip6fxzy8"; depends=[MASS pracma Rcpp RcppArmadillo]; }; metricTester = derive2 { name="metricTester"; version="1.3.4"; sha256="1z4z8km1jr0azh2zxp1sffm5picc9y6w9yn68zr1axli0l64y3a0"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; mets = derive2 { name="mets"; version="1.2.6"; sha256="0vaqizmr27144dkh5mh095vih0p70j3ly9zwk5h0fklmn8bf2qhl"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; @@ -9946,14 +10151,13 @@ in with self; { mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; mgc = derive2 { name="mgc"; version="1.0.1"; sha256="0bdj890v2rinsddny8kwa48cgqh9qlzfd7k5s4i9mg40ajr0f291"; depends=[MASS SDMTools]; }; mgcViz = derive2 { name="mgcViz"; version="0.1.4"; sha256="0gxxmnawvq88jljdszhjw85px4w0q73nmgyq61hlfvjd2k8lscc8"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; - mgcv = derive2 { name="mgcv"; version="1.8-29"; sha256="1236gz25nap1aprbvcrqvmmnl6f8cvbjy8dcl4j968cpalqax5ww"; depends=[Matrix nlme]; }; + mgcv = derive2 { name="mgcv"; version="1.8-31"; sha256="1if34mqsn9r7g0l82lxvvx0wjhi9paqdymyd73nschxcl1if8vbk"; depends=[Matrix nlme]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; mgm = derive2 { name="mgm"; version="1.2-7"; sha256="1s0m9xjq2d067ba2cx87q83nqmdza34vw9g0g0mqd8ap53rmqhas"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; mgsub = derive2 { name="mgsub"; version="1.7.1"; sha256="0v3386a7i71ixqidqfqakl428rnq0z9pjz08lgmyvray0ls5vmvi"; depends=[]; }; mgwrsar = derive2 { name="mgwrsar"; version="0.1"; sha256="13h56fgq3fs28fqh19hwbcza622xd921qnjwcgw2rjwaabqz70w5"; depends=[doParallel foreach htmltools leaflet Matrix nabor Rcpp RcppEigen sp spgwr]; }; mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; }; - mht = derive2 { name="mht"; version="3.1.2"; sha256="01zcaf9k0qayzm8dn5dvnm5n3qgqpj8r96qhqaa5vbjcr6ci2x2r"; depends=[glmnet Matrix]; }; mhtboot = derive2 { name="mhtboot"; version="1.3.3"; sha256="1z0p8ny9lpnrshgas7cad2lv7j0blw0n6ihiimw600n70h73jwrn"; depends=[ggplot2 reshape2]; }; mhurdle = derive2 { name="mhurdle"; version="1.1-8"; sha256="0nnzhcp9ghx2ifaj8lvhvv1acb3dpwi8m9n1al8zjvfg35wmxwwm"; depends=[Formula maxLik survival texreg truncreg]; }; mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; @@ -9972,7 +10176,7 @@ in with self; { mice = derive2 { name="mice"; version="3.6.0"; sha256="0pgcxdmp77604h6f4x8hhs6j4xdjgf5b9zvnixyzdj8vcgdjpivv"; depends=[broom dplyr lattice MASS mitml nnet Rcpp rlang rpart survival]; }; miceFast = derive2 { name="miceFast"; version="0.5.1"; sha256="0n09l6y7jwcskv2lfynyzl614c7x84yyc52wqwyhnzvd8lzapp5d"; depends=[data_table Rcpp RcppArmadillo]; }; miceMNAR = derive2 { name="miceMNAR"; version="1.0.2"; sha256="1s607icaf3c25mn8xdi3zkzmm8m7qd9a6vjdlz5j7ig2gc9f2y2d"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; - miceadds = derive2 { name="miceadds"; version="3.5-14"; sha256="1fk554wkjz6xmqc5ymimp96xvcv57c91g1wsykb8yql9x11c9gbz"; depends=[mice mitools Rcpp RcppArmadillo]; }; + miceadds = derive2 { name="miceadds"; version="3.6-21"; sha256="1gk91rg1p1s042cnlkcm6lnszfrknpbysc8gkhinyxyw7bm87h62"; depends=[mice mitools Rcpp RcppArmadillo]; }; micemd = derive2 { name="micemd"; version="1.6.0"; sha256="1n8kzdf2713dw9mbzvbwl0gknzi9amdqnabfw2wmb70gsvma3f48"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; michelRodange = derive2 { name="michelRodange"; version="1.0.0"; sha256="1pykqb9hmpvn77k0vhfh36iyhamz9h5kpswq3ql31h9nknfy3ixi"; depends=[magrittr]; }; micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; @@ -9988,13 +10192,13 @@ in with self; { micropan = derive2 { name="micropan"; version="1.2"; sha256="1b3hd5c6l9njns372zhqfryibrpqmrjxmc1p5gzdwm7450cs7qky"; depends=[BH igraph microseq Rcpp]; }; microplot = derive2 { name="microplot"; version="1.0-42"; sha256="062dd4k6ryyl44lwbc2qgdsfcs1fiv9j2n6lx9driw6vng533b6q"; depends=[cowplot flextable ggplot2 HH Hmisc htmltools lattice officer]; }; microsamplingDesign = derive2 { name="microsamplingDesign"; version="1.0.6"; sha256="093rldfx3b45j4qn0r42d7fmqzx4h43s6vq4zlysdimq4ncxdm3v"; depends=[abind deSolve devtools ggplot2 gridExtra gtools knitr MASS matrixcalc matrixStats plyr Rcpp RcppArmadillo readr reshape2 shiny stringr]; }; - microseq = derive2 { name="microseq"; version="1.2.3"; sha256="1cpgnl3y1v5pwh333lkg7igh3qgga0mhmhc8vdb7gw0k5gzh7gzp"; depends=[Rcpp]; }; + microseq = derive2 { name="microseq"; version="1.3"; sha256="1svkgx2ymxzn0zm1gzwcjhdyml2zjy4m0p7wg5phmnxpkz5m9win"; depends=[Rcpp stringr tibble]; }; microsynth = derive2 { name="microsynth"; version="2.0.13"; sha256="1ijv7kbxl087m0wzdbzl9p74116dfwid03dlamy4b1l308azc4ag"; depends=[boot kernlab LowRankQP MASS nleqslv pracma survey]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; midasr = derive2 { name="midasr"; version="0.7"; sha256="02kjyzbznmy0362ambnnh8vc7ywbgikk3n7705sww9p0k0pywrrx"; depends=[forecast Formula MASS Matrix numDeriv optimx quantreg sandwich texreg zoo]; }; midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; }; midrangeMCP = derive2 { name="midrangeMCP"; version="1.3"; sha256="1733dlhzbgrjdzd88rh9dkqhxh05gr078sbmihab7whbrpsq8068"; depends=[SMR WriteXLS xtable]; }; - migest = derive2 { name="migest"; version="1.8.0"; sha256="0736jh3wrkwd4y2nka892nr6ncaj9kgpf19hppszxj8knf5320dv"; depends=[]; }; + migest = derive2 { name="migest"; version="1.8.1"; sha256="12gk1ip1kw3x35bazxqqjf1drbs2h7kpgzbh5psd6ppphj81dzjg"; depends=[dplyr magrittr mipfp purrr stringr tidyr]; }; migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; }; migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; miic = derive2 { name="miic"; version="1.0.3"; sha256="088szscn9v9279w86mypxphp3avv17iijvcvlckx3h1ka75lkx27"; depends=[bnlearn igraph MASS ppcor Rcpp]; }; @@ -10002,6 +10206,7 @@ in with self; { mime = derive2 { name="mime"; version="0.7"; sha256="12vpip67ajb90b8p96w43ir7mavrw2i61bwvpfnrlmlj9kj3w20i"; depends=[]; }; mimi = derive2 { name="mimi"; version="0.2.0"; sha256="1ig34qd37my74nmlv3jcfrj7cnd55alxpf2flf2sssk2ws1y56xh"; depends=[data_table doParallel FactoMineR foreach glmnet rARPACK softImpute]; }; mimsy = derive2 { name="mimsy"; version="0.4.2"; sha256="0f2yy5s9dxl8k12lrnc0w5d8vl0c9by0zc7gv05a2sq5jl7zrr8j"; depends=[dplyr lubridate magrittr openxlsx]; }; + minMSE = derive2 { name="minMSE"; version="0.1.1"; sha256="11m34nmxi2v80lsix8k44vl8ms5541js4av6h3pvx11px3i3c841"; depends=[MASS]; }; mindr = derive2 { name="mindr"; version="1.2.2"; sha256="1ggpdjyjaprw03gjqk34h7k4h3cdxrwmwvjg5sdqdp0pya6ik03y"; depends=[data_tree htmlwidgets jsonlite knitr]; }; mineCitrus = derive2 { name="mineCitrus"; version="1.0.0"; sha256="031nfhrsc5rlqls3vyrk18lx0pd4ssdk96cmfr4ifaciz0rgv8h2"; depends=[ggplot2]; }; mined = derive2 { name="mined"; version="1.0-2"; sha256="1py6gylya8dhmxcyfrcwbwc5q226m041rs3cmj4q0dhqy8iy2zsw"; depends=[Rcpp RcppEigen]; }; @@ -10021,7 +10226,6 @@ in with self; { minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; mipfp = derive2 { name="mipfp"; version="3.2.1"; sha256="1gxazpg81vj5dywpb6jb29188jw28qil6pfygawa7znnjn3k5ca6"; depends=[cmm numDeriv Rsolnp]; }; mipred = derive2 { name="mipred"; version="0.0.1"; sha256="0kijn2xj0dh28rm2sjgd8j1a3c5avc3fjfvvcmzfasvxqdjflv6j"; depends=[mice]; }; - miraculix = derive2 { name="miraculix"; version="0.9.4"; sha256="14wc1bagrlcpa6r563r8slp5kb5v2vz1il6wh105qns1w8i9rrgi"; depends=[RandomFieldsUtils]; }; mirt = derive2 { name="mirt"; version="1.31"; sha256="1jfpb69ih0kyffjf9k7z8yhfyw6ngqhkjxmpzgmm0v8lr2mnw0gq"; depends=[dcurver Deriv GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; mirtCAT = derive2 { name="mirtCAT"; version="1.9.3"; sha256="1yd03rkviqxl9rsqnny3fgn2rj0hss49nav11b9w4np8lv9zkwgh"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; mirtjml = derive2 { name="mirtjml"; version="1.2"; sha256="0vjcbgl1s8haqc0xi4k8dsqvhr2qyz4ikhjwmqrxyl5xssjy330r"; depends=[GPArotation Rcpp RcppArmadillo]; }; @@ -10029,7 +10233,8 @@ in with self; { misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; }; miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; }; - miscTools = derive2 { name="miscTools"; version="0.6-22"; sha256="1sngkl5rwg1vp2xx9a5g2nz2nhwxwv7ni21ww7hyjc8x5mhb42yh"; depends=[]; }; + miscIC = derive2 { name="miscIC"; version="0.1.0"; sha256="0pnwc3b318xxnmb7scrj4qkqlvqfyczspdg496kl0ixsiaafr1ad"; depends=[nnls]; }; + miscTools = derive2 { name="miscTools"; version="0.6-24"; sha256="0sqixfawnf2kb1172a3dcihk85gxwzqmkllkdgg0mik8zch635s9"; depends=[digest]; }; misclassGLM = derive2 { name="misclassGLM"; version="0.2.0"; sha256="1dz36q2gl0q8d0s2rxn28b8ykw31wcdxf91s7ypmjggfdj64i8br"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; miscor = derive2 { name="miscor"; version="0.1-1"; sha256="1vn0q0i2f1szjywddb7h7krpbf0qch6gmbzs03m4zb03xd70983b"; depends=[]; }; miscset = derive2 { name="miscset"; version="1.1.0"; sha256="1gwi7jnqdf2fa8yk8gmcc7dcv72bbdl7yj3yccj3r5jjk41vdp91"; depends=[data_table devtools ggplot2 gridExtra Rcpp xtable]; }; @@ -10039,7 +10244,7 @@ in with self; { missCompare = derive2 { name="missCompare"; version="1.0.1"; sha256="0f173463dsr2xcj228aysfnabrdv8i2c9sprmd2jndn65dv8hhsz"; depends=[Amelia data_table dplyr ggdendro ggplot2 Hmisc ltm magrittr MASS Matrix mi mice missForest missMDA pcaMethods plyr rlang tidyr VIM]; }; missDeaths = derive2 { name="missDeaths"; version="2.5.1"; sha256="1vj1d4r2ikc7ppm5kgivc7bj81qkyymrs11cxj1gdll6xyfn1g1d"; depends=[cmprsk MASS mitools Rcpp relsurv rms survival]; }; missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; - missMDA = derive2 { name="missMDA"; version="1.14"; sha256="1pqwfs1p7i624ilddj48i4kig6pjw5b28ic33l09g0c4bq7nw5lh"; depends=[doParallel FactoMineR foreach mice mvtnorm]; }; + missMDA = derive2 { name="missMDA"; version="1.15"; sha256="0c4zinknrpixbd3czl1lnvwc7jswi8ci03dwajl90qxgh78g3v92"; depends=[doParallel FactoMineR foreach mice mvtnorm]; }; missRanger = derive2 { name="missRanger"; version="2.1.0"; sha256="06ic99zg91ikzvmwbj05ma46rc4ayfwylv8cnj21sbr5nxw0qpz9"; depends=[FNN ranger]; }; missSBM = derive2 { name="missSBM"; version="0.2.1"; sha256="00jxj1f7hr78srlm49finf9j2q14y1cl66rwdkm1i81l8db5fvcp"; depends=[ape corrplot ggplot2 igraph magrittr nloptr R6 Rcpp RcppArmadillo]; }; missingHE = derive2 { name="missingHE"; version="1.2.1"; sha256="1ckkszq9c095svg3syfnrcdxy64yfm14rskglpsiyl1d4im9h9c8"; depends=[bayesplot BCEA coda ggmcmc ggplot2 ggthemes gridExtra loo mcmcplots mcmcr R2jags]; }; @@ -10065,14 +10270,15 @@ in with self; { mixedsde = derive2 { name="mixedsde"; version="5.0"; sha256="0ss1ng4nx91gxj85wxxfyh9ljxsj3ag6lsj1a5d2815p9jzl7dsv"; depends=[MASS moments plot3D sde]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; mixggm = derive2 { name="mixggm"; version="1.0"; sha256="1wiiayld7rwp3mwz93zizrv0dzw02mqrzprc4z6c4jj25c8pypw5"; depends=[foreach GA mclust memoise network Rcpp RcppArmadillo]; }; + mixl = derive2 { name="mixl"; version="1.1"; sha256="0v3yxhar1ms6y2j73a5hgyh1c9v6lg5xl646mv0ischqj21bysbh"; depends=[maxLik numDeriv randtoolbox Rcpp readr sandwich stringr]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; mixlm = derive2 { name="mixlm"; version="1.2.3"; sha256="0i7nrn31yaicdpwfssnid1x8w51iv17lcl96zfr1pgrf97d7gkqd"; depends=[car leaps multcomp pls pracma]; }; - mixmeta = derive2 { name="mixmeta"; version="1.0.3"; sha256="1bg7qgw1ixv510lallq9m3313bcv2dms8id6gx0sdhj4fab8ga5b"; depends=[]; }; + mixmeta = derive2 { name="mixmeta"; version="1.0.5"; sha256="0wyzvsw76wb95fvvy43q9n9gkgc32ys8qdhm36gs56dg85bjzsgd"; depends=[]; }; mixor = derive2 { name="mixor"; version="1.0.4"; sha256="1l296z0a3kamb1m94pfx3vczp36pa0np101fy5c23kh45s59pbs7"; depends=[survival]; }; mixreg = derive2 { name="mixreg"; version="0.0-6"; sha256="04g863yxrlj0wqsmzzxph5110g3gjk094r59zzk0b9r89m8vhpsl"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; - mixsmsn = derive2 { name="mixsmsn"; version="1.1-5"; sha256="0y1ysh75xqsqk87717akiqi8p6varry8n92hanl4qwy7la0ksy7w"; depends=[mvtnorm]; }; - mixsqp = derive2 { name="mixsqp"; version="0.1-97"; sha256="0d3dcgg4p9z151cg360s008pgiq71vjc0fbpp6sxgqwbapan617k"; depends=[Rcpp RcppArmadillo]; }; + mixsmsn = derive2 { name="mixsmsn"; version="1.1-6"; sha256="0zlbs0yn336xdzymrb065rbg1zj8f7zri77lmd7c4w1rxhfjh9a9"; depends=[mvtnorm]; }; + mixsqp = derive2 { name="mixsqp"; version="0.2-2"; sha256="12gm40dlh007dqxhaba0d6ssmrarhy5qlslmgymr3sil72rgz9a4"; depends=[Rcpp RcppArmadillo]; }; mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; mixtools = derive2 { name="mixtools"; version="1.1.0"; sha256="13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"; depends=[MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; @@ -10080,12 +10286,12 @@ in with self; { mize = derive2 { name="mize"; version="0.2.2"; sha256="1p728svnj5ckixry6xw70nywqabmgdcygdsa6dvpicr2s4sffn86"; depends=[]; }; mizer = derive2 { name="mizer"; version="1.0.1"; sha256="1vn03f3j9vd8hwz18i67blif33y3cd7hc8m1h4aw7wkgdpqsyb4b"; depends=[deSolve ggplot2 plyr progress Rcpp reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="0.9.49.5"; sha256="1q4j9krbrvr74pla33vn7piqcpz4bx53hqc6jk26qv9d5q4yh5xw"; depends=[deSolve inline numDeriv plyr R6]; }; + mkin = derive2 { name="mkin"; version="0.9.49.7"; sha256="11zr15isjf26k5rzbraxxs7i1k4c6zc11va1w5wgvkhbxsa93j4r"; depends=[deSolve inline lmtest numDeriv R6]; }; mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; - mlVAR = derive2 { name="mlVAR"; version="0.4.3"; sha256="0kx8s2id4qr44wfncf924ywp996ljkb2ip5zds47x7bg55ad3mi5"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; + mlVAR = derive2 { name="mlVAR"; version="0.4.4"; sha256="0ib566qygm28lqhr3w9vzfxnpsmazlipzrfsdm3cw21wpz2lvxcr"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; mlbgameday = derive2 { name="mlbgameday"; version="0.2.0"; sha256="05b8jdrcfrh6rli9inkgizkmmj9jw0cypc5r4ckqqbrfj00zfi3q"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr tidyr xml2]; }; @@ -10096,10 +10302,10 @@ in with self; { mleap = derive2 { name="mleap"; version="0.1.3"; sha256="17i6rjbrf14g6857jpkpjwcac028861m1nn073wzf2kmznd2rfkk"; depends=[digest fs jsonlite purrr rJava sparklyr tibble]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; mlegp = derive2 { name="mlegp"; version="3.1.7"; sha256="1q0mxvr23qcxvf8k2cgs4m8yfp1gbkmprp964w8viy30japmx16l"; depends=[]; }; - mlergm = derive2 { name="mlergm"; version="0.3"; sha256="0nh1dzddamlsj31z8cns11gysrbziha0amdig873x5hj4qxfp3yr"; depends=[cowplot ergm GGally ggplot2 Matrix network plyr reshape2 sna stringr]; }; + mlergm = derive2 { name="mlergm"; version="0.4"; sha256="0mv5wmcs28n0sq8z46mc4v2j1cqf8x1s5ji3phkvizasyfg9wi78"; depends=[cowplot ergm GGally ggplot2 lpSolve Matrix network plyr reshape2 sna stringr]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlf = derive2 { name="mlf"; version="1.2.1"; sha256="09ihnibpknpp26hdlbxyr99yz7z0n8qpsjs5aq3zngng0yh3wdn9"; depends=[]; }; - mlflow = derive2 { name="mlflow"; version="1.3.0"; sha256="15q041pfnzxvr8q5fp0jnk1lplszg44mmv5gg9grikyw3211n1xg"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; + mlflow = derive2 { name="mlflow"; version="1.4.0"; sha256="0kn9phlr817mjn1sj2x31ia2r3xfvr4cfhk96rp8c4vx2b2chppw"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mljar = derive2 { name="mljar"; version="0.1.1"; sha256="1mw45aqjwklsnrfwf8656jf30miyrlxpz87z97nkv9i135yhwfx3"; depends=[httr jsonlite readr]; }; @@ -10111,21 +10317,23 @@ in with self; { mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="1.0-1"; sha256="1cjh0dl0yvzyz5wsplygm4al2zfvs7cgdg5fhbcjnv159qfvflml"; depends=[Formula lmtest MASS Rdpack statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; - mlr = derive2 { name="mlr"; version="2.15.0"; sha256="092kr9h1hak7d4zhsrmi9rmyf4kpivpv2xz8wnsr0zd8cnyw5hm3"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; - mlr3 = derive2 { name="mlr3"; version="0.1.3"; sha256="0gd573vw026pjhvf8zbqs2avs1nvsd88w0ld6x12azmz9kbnla8s"; depends=[backports checkmate data_table digest lgr Metrics mlbench mlr3misc paradox R6 uuid]; }; - mlr3db = derive2 { name="mlr3db"; version="0.1.2"; sha256="15hyi1bp9sk4yznv2rfrq9ryi4dy2v5m0k797sg1i9q81bdwqwsp"; depends=[checkmate data_table digest dplyr mlr3 R6]; }; + mlr = derive2 { name="mlr"; version="2.16.0"; sha256="0sp7hi7x4f23yjyfcmhv4892aci4ancym8zkkff16wdvkhfi9f1x"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; + mlr3 = derive2 { name="mlr3"; version="0.1.4"; sha256="1rc9xf9pqj9v85slcc07wqi94w6d0x2m78yk5x1x1j06kvrz29y3"; depends=[backports checkmate data_table digest lgr Metrics mlbench mlr3misc paradox R6 uuid]; }; + mlr3db = derive2 { name="mlr3db"; version="0.1.3"; sha256="0zg5hmlc7mybhrz0hrz4rmvdhbvjp4d0im0r22qvsd3phv614v8m"; depends=[checkmate data_table digest dplyr mlr3 R6]; }; mlr3filters = derive2 { name="mlr3filters"; version="0.1.0"; sha256="12ss7w68s6dmq6dy8iap2kipc1m8d8di5iywghcqspdbzcx5ynmz"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; - mlr3learners = derive2 { name="mlr3learners"; version="0.1.3"; sha256="0a6j4k883ykv4li22a9v3l8hli8db21bkg5kilnngnljhrpdmjlc"; depends=[data_table mlr3 mlr3misc paradox R6]; }; + mlr3learners = derive2 { name="mlr3learners"; version="0.1.5"; sha256="0yraazjfrd3vpbl9na5c77yy8lcdhisq30d7nl13ha2pssn7ifb3"; depends=[data_table mlr3 mlr3misc paradox R6]; }; + mlr3measures = derive2 { name="mlr3measures"; version="0.1.1"; sha256="0pbsj1yra3wx5xny4ak901qfj983lk8nsiqw2x8kzz46dskx4wzl"; depends=[checkmate]; }; mlr3misc = derive2 { name="mlr3misc"; version="0.1.5"; sha256="1ni8a318gc6slscb28vl3a33kr5qfwmjbc66igmi7bn5brk7iik1"; depends=[backports checkmate data_table R6]; }; + mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.1.1"; sha256="0sw907w9w6w71jq8pirmwd683blic6pfhsj6b2cf8jjnnx56amhn"; depends=[backports checkmate data_table digest mlr3 mlr3misc paradox R6 withr]; }; mlr3tuning = derive2 { name="mlr3tuning"; version="0.1.0"; sha256="065vwq830hb388r8767dlr1k80rq27zhpmfjnvh9w64jn46wz763"; depends=[checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; mlrCPO = derive2 { name="mlrCPO"; version="0.3.4-4"; sha256="0v8d336f7xghs2pdh6r5j21i6mcy0p2wdzx4nkj69fsc5gn0n058"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; - mlrMBO = derive2 { name="mlrMBO"; version="1.1.2"; sha256="1ziyiycgwr4vgilji8dkf1c0kyqjnbmqi3qj35q3si2xbnmcm14f"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; + mlrMBO = derive2 { name="mlrMBO"; version="1.1.3"; sha256="1y67kc8kcbim23kkymkn10h761r5pyq80cfzz6a7f0rnmagzvqxp"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="1.0-5"; sha256="0c0w54yrynsz270aqc2l61lggqfp0hrcxnazjd1bgprim99m5nv0"; depends=[alabama basefun BB coneproj numDeriv sandwich survival variables]; }; + mlt = derive2 { name="mlt"; version="1.0-7"; sha256="004mydn99p34f4nxh49zi3q2q1lw164j7ijbcd9fw7blm7i14dp0"; depends=[alabama basefun BB coneproj numDeriv sandwich survival variables]; }; mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-3"; sha256="1nminamywhwh3l2w3458iapb0zi1784nvdys3ni9ynxbgnxzgr70"; depends=[mlt numDeriv]; }; mltest = derive2 { name="mltest"; version="1.0.1"; sha256="14gyssfph088v936mpywmd4y8z9vdv0zk8638vlg23j8cf5j4al2"; depends=[]; }; mltools = derive2 { name="mltools"; version="0.3.5"; sha256="045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh"; depends=[data_table Matrix]; }; - mlxR = derive2 { name="mlxR"; version="4.0.6"; sha256="0865lmj6mavfymmmnxq95x37yr1kqfqsnad322cibqvbkswlr39r"; depends=[ggplot2]; }; + mlxR = derive2 { name="mlxR"; version="4.1.0"; sha256="1jb214isf0zbx1j7xkidmc4jrvlw3hfvs7q2if3489p0si1n2k23"; depends=[ggplot2]; }; mma = derive2 { name="mma"; version="9.0-0"; sha256="1nam7gn3a7jp4dcy9q6ypk7icknflvgmsdzv218qhf28zaw2ybza"; depends=[car doParallel foreach gbm gplots lattice plotrix survival]; }; mmabig = derive2 { name="mmabig"; version="2.0-0"; sha256="1kp7q2xvkbwa8syk82dsynzizjmhh9z3p7r5hnnvp169as0yvgwl"; depends=[car glmnet gplots mma survival]; }; mmand = derive2 { name="mmand"; version="1.5.4"; sha256="04kqxdbj54nflgx9lb80xxp121ligdzjkym850z3kbw60ashxybh"; depends=[Rcpp]; }; @@ -10142,6 +10350,7 @@ in with self; { mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; }; mmmgee = derive2 { name="mmmgee"; version="1.20"; sha256="0y3pwnc9h7y2l9cvgfl62nl1vnnkla2y8082jhdvxsb3mk88rgad"; depends=[Matrix mvtnorm]; }; mmod = derive2 { name="mmod"; version="1.3.3"; sha256="1dz6887mlqbagjj98wcabmxj9hvsz8pgsizy1fqkwjhhs44c62y4"; depends=[adegenet pegas]; }; + mmpca = derive2 { name="mmpca"; version="1.0.1"; sha256="0ah9w3sf7fh6simbhgx88q9cr44r79f314r615ss9l29m6ws7ffv"; depends=[CMF digest gmp gsl Rcpp RcppEigen]; }; mmpf = derive2 { name="mmpf"; version="0.0.5"; sha256="1w1ll1l7yzwb1wmlrcfpgqyzni7yb20kxy422y867hx2ndxlfwpz"; depends=[checkmate data_table]; }; mmpp = derive2 { name="mmpp"; version="0.6"; sha256="16aypjf4i0ya3qgxqrrg8y0xbnq1pnqky1dpkgln5q494hphyg91"; depends=[]; }; mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; }; @@ -10149,6 +10358,8 @@ in with self; { mmtfa = derive2 { name="mmtfa"; version="0.3"; sha256="0qfszr6f10v27w1pfns78dyarznqryl4m1ppyqap7l8fc12sliky"; depends=[matrixStats mvnfast]; }; mmtsne = derive2 { name="mmtsne"; version="0.1.0"; sha256="1by0hrggla6idc1isnq072i1wfpw4x7id3hkg8l65gy8iycccd12"; depends=[]; }; mnis = derive2 { name="mnis"; version="0.2.7"; sha256="1yhhgrhsk3ww93vd29ipw16bkn16w0b2i7d46cb5bb5xs4s7vivd"; depends=[dplyr httr jsonlite Rcpp stringi tibble]; }; + mniw = derive2 { name="mniw"; version="1.0"; sha256="1iamq6cq027ncakm4rfx2p1k2mcj7nk5vk57m8ndnbmmi2y9wwv9"; depends=[Rcpp RcppEigen]; }; + mnj = derive2 { name="mnj"; version="1.0"; sha256="05rz6krcq56zqvvaz3myf1aki2z635g2zrqyl25n2da1cvyjwdzq"; depends=[rpart]; }; mnlfa = derive2 { name="mnlfa"; version="0.1-53"; sha256="1hw4m6zpb2322041aizam1l71zxz3i7siawid8npig8v9dhkaqrf"; depends=[CDM Rcpp RcppArmadillo]; }; mnlogit = derive2 { name="mnlogit"; version="1.2.6"; sha256="0dfwpkl8g7ap5xr48smiv8vdbamd2r1liy9nwpsn0kcsr9cj65n9"; depends=[Formula lmtest mlogit]; }; mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; @@ -10169,12 +10380,12 @@ in with self; { modTurPoint = derive2 { name="modTurPoint"; version="0.1.0"; sha256="1m24vsi80ln1r7sr40pipaaanyc60yfxmjzf8l7nfy3yvyr8zqpn"; depends=[]; }; modcmfitr = derive2 { name="modcmfitr"; version="0.1.0"; sha256="1d6fi7pc10w2a97h1prhkg5cvzmxjp11c5bwrz90zry0m8anwjyh"; depends=[gtools nloptr]; }; modeLLtest = derive2 { name="modeLLtest"; version="1.0.0"; sha256="1f80bgw1l6zgwlhz1agdrl5d44jfrk50yi3jgwf14l4zjx8x8rp3"; depends=[coxrobust MASS quantreg Rcpp RcppArmadillo survival]; }; - modeest = derive2 { name="modeest"; version="2.3.3"; sha256="1y9kzi0hhpm97a38z8c6dkma1wyhx15sfmqmlxcbs8dmlyibbjin"; depends=[bazar fBasics genefilter stable stabledist statip]; }; + modeest = derive2 { name="modeest"; version="2.4.0"; sha256="087dw0013y4m7fcl06mxylh9lnp6acysl80d80r9srv4pw4r950s"; depends=[fBasics stable stabledist statip]; }; modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; model4you = derive2 { name="model4you"; version="0.9-3"; sha256="03s87dklil69znflny9vcl934yisfb13d0gdk94279cb4hb693c0"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; modelDown = derive2 { name="modelDown"; version="1.0.1"; sha256="0rdpma8g461a17n6qsdvjb9s5nnhap1n05mavjy8cpj7d8j7ikkv"; depends=[archivist auditor breakDown DALEX devtools drifter DT ggplot2 kableExtra psych svglite whisker]; }; modelObj = derive2 { name="modelObj"; version="4.0"; sha256="1py2y80x37mmnl2y0pxdbhqkjrln6x210hg0g224d34lxk71m172"; depends=[]; }; - modelStudio = derive2 { name="modelStudio"; version="0.1.7"; sha256="01w1ipjmbfpfjj4cvgc3spp0qjk0q4q49w1njm920mabi61a144n"; depends=[iBreakDown ingredients jsonlite r2d3]; }; + modelStudio = derive2 { name="modelStudio"; version="0.1.9"; sha256="076awi00q53vq471rx71kjzkdfrkkpazjmwawb5g8kjsvyplkrii"; depends=[iBreakDown ingredients jsonlite r2d3]; }; modeldb = derive2 { name="modeldb"; version="0.2.0"; sha256="1qcgmv31gd1x0mzxq4lcarmswsr75qgq5zpfcwchxzrz97ncbwgd"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; modelgrid = derive2 { name="modelgrid"; version="1.1.1.0"; sha256="1z6g0akczry7vldkk6anfq572zbsfzbd6qnyllgjpbxhy3rrrq0r"; depends=[caret dplyr ggplot2 lattice magrittr purrr]; }; @@ -10183,7 +10394,7 @@ in with self; { modelsummary = derive2 { name="modelsummary"; version="0.1.0"; sha256="1g6yc89q267zjplqpwiy6wwvdswyhr6lhg2sldm8zhmbm81jcvks"; depends=[broom checkmate dplyr generics magrittr purrr stringr tibble tidyr]; }; modeltools = derive2 { name="modeltools"; version="0.2-22"; sha256="1s9lmkac3rl0nknf4wizfhg7ryq7c8yvvyc4z619238br27hhsi5"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; - moderndive = derive2 { name="moderndive"; version="0.3.0"; sha256="0ww435flspm4yi25v9nh2cdn9bpnwjxdz4fg3cny1c4djs2bzgz2"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; + moderndive = derive2 { name="moderndive"; version="0.4.0"; sha256="16fbr80v0f5v6is19d5zh9s2qgqw2cb5q71lna7lp0hi22xljl98"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; modesto = derive2 { name="modesto"; version="0.1.2"; sha256="0vmdj8wcy0vv9jaihxrj0m5sr7favz18ngfqc8pd8rd4ipcnxkjf"; depends=[markovchain]; }; @@ -10211,7 +10422,7 @@ in with self; { monkeylearn = derive2 { name="monkeylearn"; version="0.2.0"; sha256="18lpfs64h0hy4vkdjlnmxwgagvf54kn8a1c866vv00ckyp85fvn2"; depends=[cowsay digest dplyr httr jsonlite magrittr purrr ratelimitr tibble tidyr]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; }; - monomvn = derive2 { name="monomvn"; version="1.9-10"; sha256="13v7rk22a200wcv21phpmhkahw40p9avx8pjxadhgxw9acxcsasb"; depends=[lars MASS mvtnorm pls quadprog]; }; + monomvn = derive2 { name="monomvn"; version="1.9-13"; sha256="1hm5qf28bh0q7f4zcjqx1qxw3l8hzkx349c1y3nwyfg7436vff6a"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; monotonicity = derive2 { name="monotonicity"; version="1.3"; sha256="1h82aikpq5m54zfs1pg4mrajnss6hl0i65ka3rdywv96wmhwsdnr"; depends=[lmtest MASS sandwich]; }; monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; }; @@ -10228,23 +10439,23 @@ in with self; { mosaicCore = derive2 { name="mosaicCore"; version="0.6.0"; sha256="1klw97h6lchw1cpcl8s637ikcl428cckmjq0czi7mibh9q9mw72z"; depends=[dplyr lazyeval MASS rlang tidyr]; }; mosaicData = derive2 { name="mosaicData"; version="0.17.0"; sha256="04z0mdm52mykqsxsinhmsihn181zf6cw321gayk2rjp7lj7mwdq9"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; - mosum = derive2 { name="mosum"; version="1.2.1"; sha256="1fzxaxc5wd5dv53c460f83k8bc10688ai3qp9vhwhghahsam1wf6"; depends=[plot3D RColorBrewer Rcpp]; }; - motmot = derive2 { name="motmot"; version="2.1.2"; sha256="163ax2hshwv29b216p2vj904zd1k5xhx62pdm93rl5p333ycl9yi"; depends=[ape caper coda ks mvtnorm Rcpp]; }; + mosum = derive2 { name="mosum"; version="1.2.3"; sha256="1xrrx0gaby5gbqssvhwracm8wny31lqzd64hkmr81s41z8srkxx9"; depends=[plot3D RColorBrewer Rcpp]; }; + motmot = derive2 { name="motmot"; version="2.1.3"; sha256="09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq"; depends=[ape caper coda ks mvtnorm Rcpp]; }; motoRneuron = derive2 { name="motoRneuron"; version="1.0.0"; sha256="1hdsf4c1v5hfaqpi5y1v60zqq5fdmlqdvzpsq77diclp9vzdshja"; depends=[dygraphs ggplot2]; }; moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; - mousetrap = derive2 { name="mousetrap"; version="3.1.2"; sha256="0kk5i0xzxbcdjx9i2ck429z8pa98rxrqcb5xvck5k9fisprp5xi6"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; + mousetrap = derive2 { name="mousetrap"; version="3.1.3"; sha256="0c3jnw2jwdrmvkcwlz8gp10pljix4l41yn3jnzxcsz6l3ib50mgr"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; movMF = derive2 { name="movMF"; version="0.2-4"; sha256="0j5gp1l374479lsijw1hz00pxs09zzh7hapljv80lsvr24vfscpa"; depends=[clue skmeans slam]; }; move = derive2 { name="move"; version="3.2.2"; sha256="14wmiyk52iar90kbzi6ksl75i0kg2nmsq08sms9rr2wgswr9f7km"; depends=[geosphere httr memoise raster Rcpp rgdal sp xml2]; }; moveHMM = derive2 { name="moveHMM"; version="1.7"; sha256="031msh427hgjyr37imalr7smd79yqscw9xq5rjrixxc2w5qly9jj"; depends=[boot CircStats geosphere ggmap ggplot2 MASS numDeriv Rcpp RcppArmadillo sp]; }; - moveVis = derive2 { name="moveVis"; version="0.10.2"; sha256="18crhndhgnhd73r7yx3660z0328vrng94ihm5g8brq2b4iz1wxw3"; depends=[av cowplot curl dplyr geosphere ggplot2 gifski lubridate magick magrittr move pbapply plyr raster RStoolbox sf slippymath sp zoo]; }; + moveVis = derive2 { name="moveVis"; version="0.10.3"; sha256="1sphh8v16k0qis1ajc81sg0lb3dca7mf0wz4khlxra8sg6cj4gk2"; depends=[av cowplot curl dplyr geosphere ggplot2 gifski lubridate magick magrittr move pbapply plyr raster RStoolbox sf slippymath sp zoo]; }; moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.3"; sha256="14a2iymn4j831xlh42z5qxmhnh7xpp5bxasgpkhnb3v0b5ldyilh"; depends=[move Rcpp]; }; - movecost = derive2 { name="movecost"; version="0.2"; sha256="1y8wsh6pbg2504y1mvkl608mwxpa9j7rs18b2aiqjkq7g057cmq5"; depends=[gdistance raster rgdal rgeos sp]; }; + movecost = derive2 { name="movecost"; version="0.3"; sha256="0lrnk09sdbamxc4xhrkgggjcim1xhbsnq13f3ysadn7d1rjazl9i"; depends=[gdistance raster rgdal rgeos sp]; }; mozzie = derive2 { name="mozzie"; version="0.1.0"; sha256="09dwrv4r0hi19gzi1vpif3q4wlbny9h22430g1hhv0wkqs86mhmw"; depends=[]; }; mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; - mpath = derive2 { name="mpath"; version="0.3-17"; sha256="1pk8bkp8y8gyydil33p5fwx440zgrmz3svf4zjbxhdqng9gl10xj"; depends=[bst doParallel foreach glmnet MASS numDeriv pscl]; }; + mpath = derive2 { name="mpath"; version="0.3-20"; sha256="14nkh161bwdja6b1gycijids387714pk1fhbrljphsilvldv3682"; depends=[bst doParallel foreach MASS numDeriv pscl]; }; mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcmp = derive2 { name="mpcmp"; version="0.1.3"; sha256="11j12ns04g2xdw5r34x86bacwacf3618rzpqz8wvfs1l192l001c"; depends=[]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; @@ -10257,11 +10468,11 @@ in with self; { mppR = derive2 { name="mppR"; version="1.2.0"; sha256="0ij1r4pihlm79mywacz5fmgd6nww9026mp9a3hamslpn68pflvpz"; depends=[ggplot2 igraph qtl]; }; mppa = derive2 { name="mppa"; version="1.0"; sha256="06v6vq2nfh4b407x2gyvcp5wbdrcnk3m8y58akapi66lj8xplcx4"; depends=[]; }; mpr = derive2 { name="mpr"; version="1.0.4"; sha256="13fqvndwxzqa1safa43ad90pkiqnpqmgr0pkwp8lwmnxqmrmj0jb"; depends=[survival]; }; - mpt = derive2 { name="mpt"; version="0.6-0"; sha256="02r6wqlq9l6cvjhwgmhjbijk7c0rzaxdvc9j5lnascm2d55npfj3"; depends=[]; }; + mpt = derive2 { name="mpt"; version="0.6-1"; sha256="13f48nflz6b3dk1d22ndfn22sdkz1rzhbh8c85lxk23qhfyc6fv6"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; }; - mrMLM = derive2 { name="mrMLM"; version="3.1"; sha256="0mmnqgirbihq25fcy7bqs6qsw9dz6v1mzlm5ccs6pfpi852460c9"; depends=[bigmemory coin data_table doParallel foreach ggplot2 lars MASS ncvreg openxlsx qqman sampling stringr]; }; - mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="3.2"; sha256="0xhbkvq9bd0spnpd8acnmf3spsi1kz43wf2na5b122iv7ppwl3ix"; depends=[bigmemory coin data_table doParallel foreach ggplot2 lars MASS mrMLM ncvreg openxlsx qqman sampling shiny shinyjs stringr]; }; + mrMLM = derive2 { name="mrMLM"; version="4.0"; sha256="03y8gsnz1xwjb5imzgs0iv7hfyajfxag2fjyg1s8qwbvl1s6w04c"; depends=[coin data_table doParallel foreach ggplot2 lars ncvreg qqman sampling sbl]; }; + mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="4.0"; sha256="0jl61rc642mqg9gmil6vdfc9296srvs2vmfm43ds0f46ysbh8wpx"; depends=[bigmemory coin data_table doParallel foreach ggplot2 lars mrMLM ncvreg openxlsx qqman sampling sbl shiny shinyjs]; }; mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.4.0"; sha256="0pjcwqx3zykpwyykwgqziwignd41sjm2s1blyjwc1lhymis4ldzq"; depends=[mvtnorm]; }; mrbayes = derive2 { name="mrbayes"; version="0.1.0"; sha256="0p0a1g6xv7g3scmn290ja4bicbdz5c9y6c4hfn4c7advd6ha6ang"; depends=[]; }; @@ -10271,7 +10482,7 @@ in with self; { mregions = derive2 { name="mregions"; version="0.1.6"; sha256="0ix77hqcllhcpldchlnvciiflm6ysylynnnqvczpf8vx7gwa3lrk"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; mrfDepth = derive2 { name="mrfDepth"; version="1.0.11"; sha256="0x4z4agwbzlyzbkf6aj7y9061cm05dvhzpg05wc7k59xbq1ns1sv"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; mrfse = derive2 { name="mrfse"; version="0.1"; sha256="156qy6g2s6cxyd1ijzn709jniml6308gdzvkzcks5q6s7gs9sl2m"; depends=[]; }; - mrgsolve = derive2 { name="mrgsolve"; version="0.9.2"; sha256="1y3dh5myswghals4nz2m4jb8qk3q6dzgnqm0bf4dilzgpbj3gdx6"; depends=[BH dplyr magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; + mrgsolve = derive2 { name="mrgsolve"; version="0.10.0"; sha256="1z2i3sl5s6z1pk3fy324zfm9gpdzr1g4af2fhrwhsdk97l6580ij"; depends=[BH dplyr magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; mri = derive2 { name="mri"; version="1.0.1"; sha256="1dssq556kid6c3djp0s6v853cranv2wjs2c9521l5ykg5g33hfmv"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-1"; sha256="12sfyw5b1lryczl92xvyvhl37qfx3ybg4y9awsl0b7f51zi0lzy3"; depends=[lattice misc3d oro_nifti]; }; mro = derive2 { name="mro"; version="0.1.1"; sha256="00gc2hd8q5hb2xrswclcqqw1gxl83zmpma6bhsggg3kppsw1dpjv"; depends=[MASS matrixcalc]; }; @@ -10282,7 +10493,7 @@ in with self; { msaR = derive2 { name="msaR"; version="0.3.0"; sha256="0lj9yhsissr4rgavyhgdxi2nrkq2088darzraisx9jsirjr49jf8"; depends=[ape htmlwidgets]; }; msaenet = derive2 { name="msaenet"; version="3.1"; sha256="067p97z54dwhxy0w4ihi8dddcbvglh8ssynbh29fl9jyxfwjr1ms"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; - mschart = derive2 { name="mschart"; version="0.2.4"; sha256="0499yrdhrihcj6l334nf7abjpzph0ziwwscbzxa25xldv4qrviq2"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; + mschart = derive2 { name="mschart"; version="0.2.5"; sha256="08j342slv4ca6qkd12hh7jmmv5wv6kfxamw34dr6sd89kzrfdj0p"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscstts = derive2 { name="mscstts"; version="0.5.2"; sha256="1zvicr1c9lh7cscbx7j5d98zkjwq7piggyz6ssz19gpp2gfc4igy"; depends=[httr jsonlite tuneR]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; @@ -10300,13 +10511,13 @@ in with self; { msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; msos = derive2 { name="msos"; version="1.1.0"; sha256="1dlqmjz5f8h71334kzdjbzvkn0dhysp7fb18g45qqs79cqpf1vzf"; depends=[mclust tree]; }; - mssm = derive2 { name="mssm"; version="0.1.2"; sha256="1x788jlr1jr1nsy5jlmqrrdgh2r7vgk6qwwvmals5n47avv7sxaw"; depends=[nloptr Rcpp RcppArmadillo testthat]; }; + mssm = derive2 { name="mssm"; version="0.1.3"; sha256="1d1iksvm97g42p4y3jfzrk0xf4bbw8n237dcmy9jjyaw9vlxw61h"; depends=[nloptr Rcpp RcppArmadillo testthat]; }; mssqlR = derive2 { name="mssqlR"; version="1.0.0"; sha256="0qdnm7cx9cg14vfcnkmcjqr1jpxsw8xlrbnxldvzz44mzv2n878l"; depends=[magrittr RODBC]; }; mstR = derive2 { name="mstR"; version="1.2"; sha256="0v8cv9pswkvw0lva6jx5vavsb20dawgq83gn4rgydyhvigcl5szd"; depends=[]; }; mstate = derive2 { name="mstate"; version="0.2.11"; sha256="13kw1n1p2f1f0k5hkcc4732wlhiy3csx8nx2ajrgw06svzksgh3y"; depends=[RColorBrewer survival]; }; mstherm = derive2 { name="mstherm"; version="0.4.7"; sha256="04jrp0w17svwmrvx356jmh04npbwhk9nvfy3r39vqr82yrvn6jip"; depends=[doParallel foreach nls2 plotrix RColorBrewer]; }; mstknnclust = derive2 { name="mstknnclust"; version="0.1.0"; sha256="1q7cx4yjgdvwkjfx07dywlh02zd3002165wh88aqhs3999jhnpnz"; depends=[amap igraph]; }; - mstrio = derive2 { name="mstrio"; version="10.11.1"; sha256="1k407b75kfvqlvlr9wcklf81b2cby3yi6jdi5ka661n5rybcs4nn"; depends=[httr jsonlite openssl]; }; + mstrio = derive2 { name="mstrio"; version="11.1.4.25"; sha256="017g2y0imfhn6d9k1fa1h9ckln6mmn7adn5dj2fa8mdf6mygbxdb"; depends=[httr jsonlite miniUI openssl R6 rstudioapi shiny shinyjs]; }; msu = derive2 { name="msu"; version="0.0.1"; sha256="1vhh9725dbywmzihnmsq1jircpn91r8227j2f76fvma9rwss90p7"; depends=[entropy]; }; mtconnectR = derive2 { name="mtconnectR"; version="1.2.1"; sha256="0hl46h535mjqwgrhmxlixhfsych3blzcynffp55nr1ynrra4dn06"; depends=[data_table dplyr dtw ggplot2 lubridate magrittr plyr proxy stringr tidyr XML]; }; mthapower = derive2 { name="mthapower"; version="0.1.1"; sha256="0g6dn0qn7z6qc1gbzspy1n7b803427bc9fv5yqk7j8i1is1p8h94"; depends=[]; }; @@ -10324,6 +10535,7 @@ in with self; { muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; mulset = derive2 { name="mulset"; version="1.0.0"; sha256="0pigiy6hfiqh6x4zx6zqn3ykk36s3abzzyb67jdlf4jzc5zhrl9g"; depends=[digest gtools]; }; multDM = derive2 { name="multDM"; version="1.0"; sha256="06vjbsjmqdnndpqacfpgq5w8q6xg81s7vd9fhwdkww3adr7r8cg3"; depends=[]; }; + multbxxc = derive2 { name="multbxxc"; version="1.0.1"; sha256="1ip5awjc2ljpy6nsr4y42x0yg4n7lyaxp9kzfjvwp41k9lriz4gm"; depends=[Rcpp RcppArmadillo rmumps]; }; multcomp = derive2 { name="multcomp"; version="1.4-10"; sha256="1kzmdn9jmz5bmhf3wsfr12ljbasmwsgcsfdia52k0bi6q0swdg19"; depends=[codetools mvtnorm sandwich survival TH_data]; }; multcompView = derive2 { name="multcompView"; version="0.1-7"; sha256="18gfn3dxgfzjs13l039l2xdkkf10fapjjhxzjx76k0iac06i1p7i"; depends=[]; }; multdyn = derive2 { name="multdyn"; version="1.6"; sha256="06yab2lmxp7lc7zjk8n194mn5vza0yjbp276iair3ry35my4h3v8"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; @@ -10348,22 +10560,22 @@ in with self; { multicross = derive2 { name="multicross"; version="2.0.0"; sha256="1ic632ig0mzvq00hrkjs8vfa5mzp8vwrqflfqfdr5wkdvcqqnhbb"; depends=[AnnotationDbi crossmatch MASS Matrix nbpMatching org_Ce_eg_db org_Hs_eg_db org_Mm_eg_db Seurat]; }; multifluo = derive2 { name="multifluo"; version="1.1"; sha256="1hnh1gj6lfnh2fn0v064bszydgsr6p9f7p8yxyw5rdxfrxymiw09"; depends=[agricolae ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; - multigraph = derive2 { name="multigraph"; version="0.91"; sha256="1ind8zqqcy4k97sdimn7bn85nbqwda92z0dp80kilcsvlhf47y35"; depends=[multiplex]; }; + multigraph = derive2 { name="multigraph"; version="0.92"; sha256="1wxia62qjy94cbcpf85nyxba6gb9d9607pkqhgy2dc5dyhhw61vs"; depends=[multiplex]; }; multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; multilaterals = derive2 { name="multilaterals"; version="1.0"; sha256="11zfdhn6qzqz0n31g23bn40wnfzkjndb753iiqvihirphzb74v5v"; depends=[ape igraph]; }; multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; multilevelMatching = derive2 { name="multilevelMatching"; version="1.0.0"; sha256="11xb52z4pkikpbba98pviy2zvggf5dlqqd987vd8f3r7wxqpl2rk"; depends=[boot MASS Matching nnet]; }; multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.5"; sha256="0926jaicdxk846vyfphb2hyg3zan3wal44x1bwamws0zf4flc4hj"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; - multimark = derive2 { name="multimark"; version="2.1.0"; sha256="1c33m33hi7s3ap310hm9y6b0ji020paislsiixa4qp4608r3cg0j"; depends=[Brobdingnag coda doParallel doRNG foreach Matrix mvtnorm prodlim raster RMark sp statmod]; }; + multimark = derive2 { name="multimark"; version="2.1.1"; sha256="08m25qg9w691i3sj023hbca5p3523nfi3kb25wk4abm97ixzf0s3"; depends=[Brobdingnag coda doParallel doRNG foreach Matrix mvtnorm prodlim raster RMark sp statmod]; }; multimode = derive2 { name="multimode"; version="1.4"; sha256="142k2jbi6y9aaqz9cwl4wk2m1y1n1fgvk873nk3psdv2h6r77slx"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; - multinet = derive2 { name="multinet"; version="3.0.3"; sha256="1dazqilfn5ws0v55h5v75n27jhgv964gdv1n5rkfjzgzrcp1djxj"; depends=[igraph RColorBrewer Rcpp]; }; + multinet = derive2 { name="multinet"; version="3.1.0"; sha256="0skxk1h7ax11mlc7pffb7m5p86baamcc8d6v93y9vz91j8304g5w"; depends=[igraph RColorBrewer Rcpp]; }; multinets = derive2 { name="multinets"; version="0.2.1"; sha256="00h1nqi49mix5rxp39i46pimmr3rl0c2869g7ss8cy0kl8hl41hz"; depends=[igraph igraphdata Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; multinomineq = derive2 { name="multinomineq"; version="0.2.1"; sha256="09h5nccfcrnl78rdxwsw5cqirfq40a6x4dmpkibc475z3xndk2rm"; depends=[coda quadprog Rcpp RcppArmadillo RcppProgress RcppXPtrUtils Rglpk]; }; multipanelfigure = derive2 { name="multipanelfigure"; version="2.0.2"; sha256="0f24b0msx6y9ccdi65d8rxf589vw5rz6pxwa55bivq8cy5s4gc27"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; - multiplex = derive2 { name="multiplex"; version="2.9"; sha256="1na0w4kzaswgzyw4wq8qmihasgbvbl426a2cx3y672l80rgjhhdh"; depends=[]; }; + multiplex = derive2 { name="multiplex"; version="2.9.2"; sha256="1qwxyzm4i33siybh65qny6bbmv039kdp7mfd5cbbx252qrz9379s"; depends=[]; }; multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; @@ -10371,7 +10583,7 @@ in with self; { multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; multistate = derive2 { name="multistate"; version="0.2"; sha256="0jdgyzc99k4py39g98c4dlcdl918568ihcyhb7csxbsn1zn1qm9l"; depends=[date relsurv statmod survival]; }; - multistateutils = derive2 { name="multistateutils"; version="1.2.2"; sha256="135rjk16k85g3j3dw5pzz98waw7g3ixjdbkl7gqmngndyc3mlii9"; depends=[data_table dplyr magrittr networkD3 Rcpp tidyr webshot]; }; + multistateutils = derive2 { name="multistateutils"; version="1.2.3"; sha256="00fs0mbx3vhs0xkcjxr1i44a2qi99bvhiikkm30m3kbalny5nn01"; depends=[data_table dplyr magrittr networkD3 Rcpp tidyr]; }; multitaper = derive2 { name="multitaper"; version="1.0-14"; sha256="04wd9bbhyx7697pfy0fpj02v1csr48hkpqj62h9p8a6w84ji4k68"; depends=[]; }; multivariance = derive2 { name="multivariance"; version="2.2.0"; sha256="1877yym7fhnjhjdfchpdjrcyz10w7flsvjq78s51y0km0rblycph"; depends=[igraph microbenchmark Rcpp]; }; multivator = derive2 { name="multivator"; version="1.1-9"; sha256="0vbqvhmym46zjr1h4s53sjrddfjpv8wi0sq4lrh2rmqarq068416"; depends=[emulator mvtnorm]; }; @@ -10400,7 +10612,7 @@ in with self; { mvPot = derive2 { name="mvPot"; version="0.1.4"; sha256="04l9dn8amwp366b6lic5fkl4kck0x2m3xcsqz6as4c3h772nhq1w"; depends=[evd gmp MASS numbers]; }; mvProbit = derive2 { name="mvProbit"; version="0.1-8"; sha256="07dizclqjlwj29yb3xwjihjh8kmn6jiq5cpf8rcirylzykfdv3wk"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; - mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.0.7"; sha256="0kcqjzsdpdclfifgbcnqg76kv4dpqsd2zajgrsgfzlhc6vvrqk42"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase]; }; + mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.1"; sha256="0p9rappzbz68jhgia9w3kpiy0x2gzm74mc1ap2xcyvk13y9pgvyz"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; mvabund = derive2 { name="mvabund"; version="4.0.1"; sha256="0la935gsiryfc0zixxr1dqj0av271x96pqxbi3bp6dksbw5gm68k"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.8.232"; sha256="0awd0jy492ha321c20kmmgl20kqphdmrmswakc0rq6h8z9d55kdg"; depends=[]; }; @@ -10433,7 +10645,7 @@ in with self; { mvtnorm = derive2 { name="mvtnorm"; version="1.0-11"; sha256="0lkjph661blc1nwfzg9w48a60wvj6ffh4zjwlisvracsx4nn2883"; depends=[]; }; mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; }; mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; }; - mwaved = derive2 { name="mwaved"; version="1.1.6"; sha256="12anv9f1mgb4p6f497zax3hzdc2wfjmi2sjha27qsfp7bfglikjn"; depends=[Rcpp shiny]; }; + mwaved = derive2 { name="mwaved"; version="1.1.7"; sha256="0g0yddsgdfyvqaj59qi6k3sknpbppdmgvq0rgnil5q8ki5skvgis"; depends=[Rcpp shiny]; }; mwshiny = derive2 { name="mwshiny"; version="2.0.0"; sha256="07x36dymd79aziz8k3sfx7l82xzmv43pkwndsfv9ii58q7nli1hz"; depends=[shiny]; }; mxkssd = derive2 { name="mxkssd"; version="1.1"; sha256="0m9763dqrk8qkrvp18bsv96jv0xhc2m8sbxdk6x3w6kdjcl663p2"; depends=[]; }; myTAI = derive2 { name="myTAI"; version="0.9.1"; sha256="0pbyxbrbbaadi5k2yp79lr6r56gjq65hmin3ssr032xipgw0d97l"; depends=[doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp RcppArmadillo readr reshape2 scales taxize tibble]; }; @@ -10451,9 +10663,10 @@ in with self; { nVennR = derive2 { name="nVennR"; version="0.2.1"; sha256="11qkwd8laf67iqyzx3ia424vykvsvy0k9d7labdgqfx2ihd95hh2"; depends=[Rcpp]; }; na_tools = derive2 { name="na.tools"; version="0.3.1"; sha256="1lbzsckfg297n85kzbin65x1l6qgg9l50hd3xi2gflxc7n2xb8bw"; depends=[]; }; nabor = derive2 { name="nabor"; version="0.5.0"; sha256="1nj39cdfwrmhgsi3cq8imxv3n6xzc1v6dzdb2cf2hybjk368v4s7"; depends=[BH Rcpp RcppEigen]; }; - nadiv = derive2 { name="nadiv"; version="2.16.0.0"; sha256="0pfg9hbhcjgbfmakl1jqqaf9i07i5z5jk7sh2x7x7p4354z30z9y"; depends=[Matrix]; }; + nadiv = derive2 { name="nadiv"; version="2.16.2.0"; sha256="0gvpl8jrczk9afc7qg6w8w0gn28nia5mh3vanlsp7j0kj3vzqqc5"; depends=[Matrix]; }; naivebayes = derive2 { name="naivebayes"; version="0.9.6"; sha256="1rmpc7ynnl909m20njdy5nc7siqqlj5xra3ry41b0pgb966ijcdz"; depends=[]; }; - naivereg = derive2 { name="naivereg"; version="1.0.1"; sha256="0wvyv54q3r4jz03jdbsmnxsinzpqcac6xjvzcrjjdzbkqfxicxal"; depends=[gmm grpreg]; }; + naivereg = derive2 { name="naivereg"; version="1.0.2"; sha256="11prmwb6jc0la4w2qlmbr9n529sn4mv3zm9h80svg6gs119a9yb0"; depends=[gmm grpreg ncvreg]; }; + nakagami = derive2 { name="nakagami"; version="1.0.0"; sha256="1i9m1nlqfdk9k3bzf8qlfc11spzfqly49n1pk7phvykzjgd1c1s4"; depends=[assertthat]; }; namedCapture = derive2 { name="namedCapture"; version="2019.7.30"; sha256="12cnd16015ig0qx41gfkf7915iyzlaa7ixdv72x9vx3rylw86y4q"; depends=[]; }; namer = derive2 { name="namer"; version="0.1.4"; sha256="0ika1imdrslfycbsg6zrssgghsc729ah4yvgjpv9kykppw098qwd"; depends=[dplyr fs glue magrittr purrr rstudioapi tibble]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; @@ -10466,34 +10679,34 @@ in with self; { nardl = derive2 { name="nardl"; version="0.1.5"; sha256="1xi1fkwgkfc1b8qsgi4lrjx419778qk0vxzl23azcziwa6fha5p8"; depends=[Formula gtools strucchange tseries]; }; narray = derive2 { name="narray"; version="0.4.1"; sha256="09n50shk2gy1m85kmvq8g3zh2nrikpllv8gph9x2id1p62rbqf1y"; depends=[progress stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; - nasapower = derive2 { name="nasapower"; version="1.1.2"; sha256="182nwk0b1i268l9i2kgybkgvw5hc5bcyzd6p2nw8kf2pcqwn8x1i"; depends=[APSIM crul curl jsonlite lubridate readr tibble]; }; + nasapower = derive2 { name="nasapower"; version="1.1.3"; sha256="1grfbj68vxsy50a0zylgfddwgr3ilrk2v60755vra9ckpmnf31zi"; depends=[APSIM crul curl jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; nat = derive2 { name="nat"; version="1.8.13"; sha256="12n81jzlzamnpkf5inczfc1x8qmfibszpkakpyc0q7r7wgpykbgv"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; nat_nblast = derive2 { name="nat.nblast"; version="1.6.2"; sha256="0b2gzyzszj2v5girxyv31nvds0837lzvim7x7bs9h897yrxs57k8"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.9"; sha256="0r0ydhxnax4x4gwp60bgarhgp59g4sis7msa3rq4kddv8qdi3gix"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; + nationwider = derive2 { name="nationwider"; version="1.0.0"; sha256="0g4lz39gn1xwxk0jd14bl70q7c537bdpclra26lqqg1xj0jcfmm1"; depends=[dplyr httr lubridate magrittr readxl rvest stringr tidyr xml2 zoo]; }; natserv = derive2 { name="natserv"; version="0.3.0"; sha256="0plfcf9c1lwfmac3nnx07hyhpr12q6mfmmj0dz8xyxdspd2ps81w"; depends=[crul data_table tibble xml2]; }; natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; nbc4va = derive2 { name="nbc4va"; version="1.1"; sha256="025p9h1ghrsq4h439gx25ffpyvh2kp1i51hm7kbzx8nmh4ka8aff"; depends=[]; }; - nbconvertR = derive2 { name="nbconvertR"; version="1.0.2"; sha256="1dc9jxfibvb27qwiykj93322nb1ahwrg69zqcc0p9xp0rpsim02w"; depends=[]; }; + nbconvertR = derive2 { name="nbconvertR"; version="1.3.2"; sha256="0yhmz177r1miain65vspclahhz8cg7638ldbpsw8ylgf7a60l0sg"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; - nc = derive2 { name="nc"; version="2019.9.16"; sha256="07bl48k4hkz7rp16h8la8z3d313vgarqb00a65grg1v1cc4sa6r3"; depends=[data_table]; }; + nc = derive2 { name="nc"; version="2019.10.19"; sha256="1z8v8i2bvqj1vdhijxabv0rw6ammfgzxxmwax1ywcka9jr0x1fnw"; depends=[data_table]; }; ncappc = derive2 { name="ncappc"; version="0.3.0"; sha256="0bf00iskrd3x43839bwn957mi3qvm2dhcmqa7hl1ib0gp2r1cnzx"; depends=[bookdown Cairo dplyr ggplot2 gridExtra gtable knitr lazyeval magrittr PopED purrr readr reshape2 rlang rmarkdown scales tibble tidyr xtable]; }; ncar = derive2 { name="ncar"; version="0.4.2"; sha256="12cz4mlcmg8vdcn6747q1vz20wyypf89jq3nzx17s3aki0vlnwmj"; depends=[NonCompart rtf]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf_tools = derive2 { name="ncdf.tools"; version="0.7.1.295"; sha256="1jgxivmg2gzvkn09n13i5xr1v0xcyp5ckhwxz6g5kdh9z2dkjhc2"; depends=[abind chron JBTools plotrix raster RColorBrewer RNetCDF]; }; - ncdf4 = derive2 { name="ncdf4"; version="1.16.1"; sha256="083sb24anyd4sw0il3x07pqn9rbx5y5ayqass6mz8x443rnjvphd"; depends=[]; }; - ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-3"; sha256="051akd7r6zx805a0xwcs95q5sd8alag0f1gzqjk3n188q8r3ji5j"; depends=[abind ncdf4 PCICt]; }; + ncdf4 = derive2 { name="ncdf4"; version="1.17"; sha256="1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv"; depends=[]; }; ncdfgeom = derive2 { name="ncdfgeom"; version="1.1.0"; sha256="19gbpf19vjzfigi9awhqjx6zsv92h4w1lg3dps3sgaibym9lq3zk"; depends=[dplyr ncmeta RNetCDF sf]; }; ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; ncf = derive2 { name="ncf"; version="1.2-8"; sha256="1j2q1dqhr8xk9fhzjkpnx8ff427d1m8qr07l2zj5lwyh9wbr1jzn"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; - ncmeta = derive2 { name="ncmeta"; version="0.1.0"; sha256="0b02nqz0757jm55yh5zw4pd52v0af8hkq84is50fr1vpp9pdpshc"; depends=[dplyr rlang RNetCDF tibble tidyr]; }; - ncodeR = derive2 { name="ncodeR"; version="0.1.3.0"; sha256="03jwvxks4db3dngrmmz7bhwq2j072lqwvnhi7xwg1pgbba02wlz7"; depends=[cli R6 rhoR]; }; + ncmeta = derive2 { name="ncmeta"; version="0.2.0"; sha256="1qrb2mnb4qjgx1ss1zwz7z034xrb9p0w0q9mqdh6rg4qgdsfhdxh"; depends=[dplyr rlang RNetCDF tibble tidyr]; }; + ncodeR = derive2 { name="ncodeR"; version="0.2.0.1"; sha256="1pxiqxhq2rxs8rxxhw1hbds7z2qkf7ws26a8wsbw815yn6jm10n8"; depends=[cli R6 rhoR]; }; ncpen = derive2 { name="ncpen"; version="1.0.0"; sha256="0vl4cbrsifr5s1691gacmp0lk3aqyq0yfafafzv6g3zygi4igrsa"; depends=[Rcpp RcppArmadillo]; }; ncvreg = derive2 { name="ncvreg"; version="3.11-1"; sha256="09s8k8gqsnwm6f5x1rr1f32pzam67migxwkbj4lfvw85v3pljdmr"; depends=[]; }; - ndjson = derive2 { name="ndjson"; version="0.7.0"; sha256="1hqbp5aii3x2yygsy4zfv3j2zl78fzrydqj3ycfl3k3nnrkrf8h5"; depends=[data_table dplyr dtplyr Rcpp]; }; + ndjson = derive2 { name="ndjson"; version="0.8.0"; sha256="0lvzbgfi1sg4kya1mvv67z14qk3vz9q57x22qh57xq8ampdkg812"; depends=[data_table Rcpp tibble]; }; ndl = derive2 { name="ndl"; version="0.2.18"; sha256="0b235v6jf98rrqp5aqw3jkk7mq8dbqmhb758zbzza1mavh4n2k7s"; depends=[Hmisc MASS Rcpp]; }; ndtv = derive2 { name="ndtv"; version="0.13.0"; sha256="1qfjvq5wch256gmg7pw9jwda33r4963a8p8jmp27cmpzdwycvnzy"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; nearfar = derive2 { name="nearfar"; version="1.2"; sha256="116rq797a5fascirz8xg465fywjf40j1k5czryvqzpik0if0w00r"; depends=[car GenSA MASS nbpMatching]; }; @@ -10513,7 +10726,7 @@ in with self; { nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; nesRdata = derive2 { name="nesRdata"; version="0.2.0"; sha256="1cr5d600bnslxbm2kknzwivvb4zyfsrf8rbrk3kk0j6dpclx5x6s"; depends=[dataone dplyr purrr rappdirs readr]; }; nestfs = derive2 { name="nestfs"; version="1.0"; sha256="0lzbjj287s5kmw9635gfyl3jdgfh5mxbwxqxmnwynbwccixk0akc"; depends=[dgof pROC]; }; - netCoin = derive2 { name="netCoin"; version="0.3.2"; sha256="04fi08879yisdmkla93rvr029inwlgg5c5vz8k24d535m8k6mjhp"; depends=[haven igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="1.1.23"; sha256="0v5ia8iwn7i21a5xa6wjnm1pn1z1y0ccbg6qqnfzg01x1d751s5q"; depends=[haven igraph Matrix]; }; netSEM = derive2 { name="netSEM"; version="0.5.1"; sha256="0k4ngl4p1v2rp1sf2x65m7p0cd6ha98fyx21b73ki0531q0d9fil"; depends=[DiagrammeR DiagrammeRsvg gtools htmlwidgets knitr magrittr MASS png rsvg segmented svglite]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netchain = derive2 { name="netchain"; version="0.1.0"; sha256="187pgsp6dn15n9bx9sj1pjx8wyfp2cs5s89s72hclanic479pv4g"; depends=[gtools igraph Matrix Rcpp stringr]; }; @@ -10523,13 +10736,13 @@ in with self; { netdiffuseR = derive2 { name="netdiffuseR"; version="1.20.2"; sha256="0fscbpn8dvaflnk06rpnxydvq1292l233rlxw14nkmm7d0508g9x"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM viridisLite]; }; netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; }; netgsa = derive2 { name="netgsa"; version="3.1.0"; sha256="0mn4dnvckdskigdfbszjnfmb3m6yfbz4qc26qwh1wznwx5wmcbf0"; depends=[corpcor dplyr glassoFast glmnet graph graphite igraph magrittr Matrix msigdbr quadprog rlang]; }; - netgwas = derive2 { name="netgwas"; version="1.10"; sha256="19gqsilw9i4hinz6qsms7cnlrrrnpriq2ws8l1naivfz94bdi7dx"; depends=[glasso huge igraph MASS Matrix qtl RBGL tmvtnorm]; }; + netgwas = derive2 { name="netgwas"; version="1.11"; sha256="13d889ji6x0v5pmqlr1gs9yskm3262fzb5i2l9lw6y6bc72q3l06"; depends=[glasso huge igraph MASS Matrix qtl RBGL tmvtnorm]; }; netjack = derive2 { name="netjack"; version="1.2.0"; sha256="060ygb0kxi0gx1ya38cmf5hhyy6jkwq5519azdqhq5i324cwzzm7"; depends=[brainGraph ggplot2 igraph Rdpack]; }; netmeta = derive2 { name="netmeta"; version="1.1-0"; sha256="16cf7cam63f07lfmvj5g8rqrdagyzphnsp4pxaklgnx5wwjwj3wj"; depends=[ggplot2 magic MASS meta]; }; netrankr = derive2 { name="netrankr"; version="0.2.1"; sha256="0csgi09ijp7ygwk7x057l9xjrzyhr7sav8hamh0p6i72l6719ssl"; depends=[igraph Rcpp RcppArmadillo]; }; netregR = derive2 { name="netregR"; version="1.0.1"; sha256="0n5absjra0imddz1spy1piij5rdz76wi4g568yby3rbhkm1896rs"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; - network = derive2 { name="network"; version="1.15"; sha256="1cscw5978fyixhkicf06c4b2g1yf6gyi8vx86cz3dy75d41mrgjw"; depends=[magrittr tibble]; }; + network = derive2 { name="network"; version="1.16.0"; sha256="0dnf1wl3za2lhx2lwd8smhlijl1cfhckgr8zz9piiirrfi2m2kx2"; depends=[magrittr tibble]; }; networkABC = derive2 { name="networkABC"; version="0.5-3"; sha256="0f3wbm76i8m9f52b0zvb2fvziqh43xy67llnv4lm54yj5szxvjr0"; depends=[network RColorBrewer sna]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.10.0"; sha256="1dgk3lj1fx0x6ccyp6h6rkzbjqqd8nflilqs4dfi8sm0fcndfcgb"; depends=[network statnet_common]; }; @@ -10560,14 +10773,16 @@ in with self; { ngstk = derive2 { name="ngstk"; version="0.2.3"; sha256="0196hnbqw9bji3bl2phjs9z5n84x5fs7iiirfd6gjyqv9xlfwd2p"; depends=[configr data_table future optparse stringi stringr]; }; nhanesA = derive2 { name="nhanesA"; version="0.6.5"; sha256="0bb53s379qrm8xqp4bsi5vgk6v6hvwadzjv09pvdp1n45z7rqj86"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhdR = derive2 { name="nhdR"; version="0.5.2"; sha256="0qi7ls10pdjcihkdnhbvbnv8dwcy1448pd5fzhpy0kjky7hfi7bj"; depends=[curl dplyr foreign gdalUtils ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; - nhdplusTools = derive2 { name="nhdplusTools"; version="0.3.8"; sha256="06vxs30iymvmdvr0ag9rywp270ya0aqkpb9wy4grv6bn9lw4n36q"; depends=[dplyr httr igraph jsonlite magrittr RANN sf units xml2]; }; + nhdplusTools = derive2 { name="nhdplusTools"; version="0.3.11"; sha256="17kskpp6m8d2as21ii0l1m2gpsc3yfcgznng4gakb49d476365zy"; depends=[dplyr httr igraph jsonlite magrittr R_utils RANN sf units xml2]; }; nhds = derive2 { name="nhds"; version="1.0.3"; sha256="1cgw3hmsik3vlnb1lgalhvhrqzwdv08dp80vwpw1nwbf8whcbxjn"; depends=[]; }; + nhm = derive2 { name="nhm"; version="0.1.0"; sha256="1yf9hnbmfb7xj8mbhnq40wvd0pd88x9qspy1jr3x0n8nb75i3jlp"; depends=[deSolve maxLik mvtnorm]; }; nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; nilde = derive2 { name="nilde"; version="1.1-3"; sha256="0h88if7dh16inyy5zh0yjqmc0c57k99la038p5vlwkj62vvjscmm"; depends=[]; }; nima = derive2 { name="nima"; version="0.5.0"; sha256="1xpzq1mg2l9hnh83hbmxcqz3v0ai62ii7k688i8lpj0xnpsm25pl"; depends=[assertthat devtools ggplot2 ggthemes gridExtra gtools plyr ProjectTemplate scales survival]; }; nimble = derive2 { name="nimble"; version="0.8.0"; sha256="0zfxv1bvvdyzdg2b0wvrc9x6y52jyqjm9ffikaql1acalblqws5y"; depends=[coda igraph R6]; }; + nimbleEcology = derive2 { name="nimbleEcology"; version="0.1.0"; sha256="195g1hcx7fyqx2la2ci88m2bykcnzrv27k4q4qq3z69c54fc5p7d"; depends=[nimble]; }; nipals = derive2 { name="nipals"; version="0.5"; sha256="1zrn1ykl9scd988wj3mm0j6g5q6lq04iwn2ibgap1lrsd0rw1zbf"; depends=[]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; @@ -10578,12 +10793,11 @@ in with self; { nleqslv = derive2 { name="nleqslv"; version="3.3.2"; sha256="1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"; depends=[]; }; nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; - nlme = derive2 { name="nlme"; version="3.1-141"; sha256="0ml00g79bimjcl0sgn6h55l5b4gfmnsnc1vvmivggn0318k4c04i"; depends=[lattice]; }; + nlme = derive2 { name="nlme"; version="3.1-142"; sha256="0figfb1i22hfkkhzpprmpp723s01r43x725a1ab0pc9gsxqg90nx"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; - nlmixr = derive2 { name="nlmixr"; version="1.1.1-2"; sha256="1x9df3w8093ri858yjmkp963pnrjx4hny2s74chf5q85q13dib0k"; depends=[BH brew cli crayon digest dparser fastGHQuad flextable generics ggplot2 huxtable lattice lbfgs lbfgsb3c magrittr Matrix memoise minqa n1qn1 nlme R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders stringr sys tidyr vpc yaml]; }; + nlmixr = derive2 { name="nlmixr"; version="1.1.1-3"; sha256="04gm74mjwz8fidapk0040fghy4wpj19412n54v8wli10xjwwb76w"; depends=[BH brew cli crayon digest dparser fastGHQuad flextable generics ggplot2 huxtable lattice lbfgs lbfgsb3c magrittr Matrix memoise minqa n1qn1 nlme R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders stringr sys tidyr vpc yaml]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; - nlnet = derive2 { name="nlnet"; version="1.2"; sha256="00lcyz5csjj9qbhh7yw0qlbnyv32k0c2dpm23v04n9wkdgs67jy0"; depends=[coin e1071 earth fdrtool igraph randomForest ROCR TSP]; }; nloptr = derive2 { name="nloptr"; version="1.2.1"; sha256="15yz60kljxwnhm2m3gryjzxl3ynhkhd5jiwc179b1hz6rlzf71hz"; depends=[]; }; nlpred = derive2 { name="nlpred"; version="1.0.0"; sha256="0a13agsacn7qw2i8ggd9v8w7k44r4faby1vv163gsa764ppj70m4"; depends=[assertthat bde cvAUC data_table np Rdpack ROCR SuperLearner]; }; nlr = derive2 { name="nlr"; version="0.1-3"; sha256="19zcnigijr3jfy4da945z4fdnrirvlmpqminaf5wwk0bz71f3b61"; depends=[GA MASS nlme quantreg robcor TSA tseries]; }; @@ -10596,7 +10810,7 @@ in with self; { nlsem = derive2 { name="nlsem"; version="0.8"; sha256="0q3wk7x67mh2447ah807djyklia2x2d45krsskffynazm83msnj9"; depends=[gaussquad lavaan mvtnorm nlme orthopolynom]; }; nlshelper = derive2 { name="nlshelper"; version="0.2"; sha256="02xnx0j8p1im1hdwnia3n51dicscjf8s33y475i3dczvhmivvbmf"; depends=[broom dplyr magicaxis mgcv nlme]; }; nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; }; - nlsmsn = derive2 { name="nlsmsn"; version="0.0-4"; sha256="1gvpy8rq020l64bdw6n7kv354l7gwa2rgxarm6k0mqq7z21fxf58"; depends=[]; }; + nlsmsn = derive2 { name="nlsmsn"; version="0.0-5"; sha256="1awslzwvv4d3kqw01p7qcqkq5shby29gprzbzxfwnvb5v86dn6ka"; depends=[]; }; nlsr = derive2 { name="nlsr"; version="2019.9.7"; sha256="1zhfnv09khd2k236jzka9znc0nlps452gwl7db0grb0ylfyxbqg4"; depends=[digest]; }; nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; }; nlstimedist = derive2 { name="nlstimedist"; version="1.1.4"; sha256="1c9yxpaxdx03yav4x0vk67f1j6w70jv212sfxrfxkz61ivyqcmlb"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; }; @@ -10605,14 +10819,14 @@ in with self; { nltm = derive2 { name="nltm"; version="1.4.2"; sha256="02f3rn5l1hfvjpymy7vljmh6iq9w1w96016kx75qw563zwhmp5kx"; depends=[survival]; }; nlts = derive2 { name="nlts"; version="1.0-2"; sha256="0s49qjwavl9ns2746nn4zy4h4dh0njfcvznm3qd61qhs7np9w1db"; depends=[acepack locfit]; }; nmaINLA = derive2 { name="nmaINLA"; version="0.1.2"; sha256="0layk1pqry2g3xiwmasrnsvmw91sgg7iz15d6iz6hbq4za61hr0k"; depends=[]; }; - nmadb = derive2 { name="nmadb"; version="1.0.0"; sha256="051kzr6hva57bsla8qbnkkkw7a3hnr4415gd6qzk9bq79q2bg53p"; depends=[devtools jsonlite RCurl readxl]; }; + nmadb = derive2 { name="nmadb"; version="1.1.0"; sha256="062h24w0678bgzn5l5qa3nchl0a121f7623acl0ljida53zx81wp"; depends=[devtools jsonlite RCurl readxl]; }; nmathresh = derive2 { name="nmathresh"; version="0.1.4"; sha256="0nsywahzph06c7grk3ch65fvll4ninqz97y007d6qdqgmym9vxjq"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmfem = derive2 { name="nmfem"; version="1.0.4"; sha256="0qn3p244i8mkmqhsjnyas2r2hcb21npn2jykf6dg7w2f1ddhbfbx"; depends=[d3heatmap dplyr mixtools plyr tidyr]; }; nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; nmixgof = derive2 { name="nmixgof"; version="0.1.0"; sha256="0cbwrsxrcf8pn4ycn6r0z8jdidw5l6kdvwyrks69fq4pjzx988d6"; depends=[Rcpp unmarked]; }; nmslibR = derive2 { name="nmslibR"; version="1.0.3"; sha256="1m3bq0vg774kqragdx1ydm4q2if3yn9llbd6ybv3c8bmbdb9h405"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; - nnTensor = derive2 { name="nnTensor"; version="1.0.1"; sha256="0h6m601wjj8xzzgc6m8fal6mhvlxpiajg2d53vyjw1hxm4ilqk4x"; depends=[fields plot3D rTensor tagcloud]; }; + nnTensor = derive2 { name="nnTensor"; version="1.0.2"; sha256="12h25kn3d70ldlqpd4nqnycv3mnzfx1f9gcw1yaspmnhs1x6gddf"; depends=[fields plot3D rTensor tagcloud]; }; nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; @@ -10620,9 +10834,10 @@ in with self; { nngeo = derive2 { name="nngeo"; version="0.2.9"; sha256="1cxrr7k2rjzg2bw43c2mr9jnr9mwwaln5j2xivmrfq2lcrhll0fi"; depends=[igraph lwgeom RANN raster Rcpp sf sp stars units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; - noaaoceans = derive2 { name="noaaoceans"; version="0.1.0"; sha256="15spkivnc6kv3w2z5m8gvlqpa6pfqxmggjchnsd3r0v61nz64ab3"; depends=[httr jsonlite rvest xml2]; }; + noaaoceans = derive2 { name="noaaoceans"; version="0.2.0"; sha256="1hvjkma14kl8f69ichk27ddxlg9cqnzif8x43ckxyny6h341bbkf"; depends=[httr jsonlite rvest xml2]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.1.1"; sha256="1ra852r5hw1ng3f4jk866jx0z2dszwvbidmfrdjchv9bfrjwmlmx"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer rlang stringr tidyr viridis XML]; }; - nodbi = derive2 { name="nodbi"; version="0.3.0"; sha256="1yb1g4xbjzadm5rljxhk7bc22s888hwj8r3yxzzik4p3pksy634h"; depends=[data_table jsonlite]; }; + noctua = derive2 { name="noctua"; version="1.2.1"; sha256="0pahdwb68xxbcg9accb2fjmcj1z8alk0kfv6dvcbidgnx7b601c1"; depends=[data_table DBI paws]; }; + nodbi = derive2 { name="nodbi"; version="0.4.0"; sha256="1jlqzj9lv9wnsb8hwy8y91369i6ykp8av35abakfpxg0302svay9"; depends=[data_table jsonlite]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.3.0"; sha256="1z0xqdfplg5rz94qcnks435md3q7jpd5f32jfm0pqnyr3536gs03"; depends=[ape picante raster sp vegan]; }; nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; @@ -10639,7 +10854,7 @@ in with self; { noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonet = derive2 { name="nonet"; version="0.4.0"; sha256="1043vplj8libbzll172h82dfwnz2lsdba5na2g9liryg8p08h4v8"; depends=[caret dplyr e1071 ggplot2 glmnet pROC purrr randomForest rlang rlist tidyverse]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; - nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.6"; sha256="0nsfpcqmfsn31gi5dyyc7y7zcafhqmv5931vkphbg51lgs6va0qp"; depends=[Matrix Rcpp RcppArmadillo rgl TSA tseries zoo]; }; + nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.7"; sha256="0p6gkhiajk168jw92gkfl4nf93fp6a4ya0c3gvsn9vz8r07pvkbr"; depends=[Matrix Rcpp RcppArmadillo rgl TSA tseries zoo]; }; nonmem2R = derive2 { name="nonmem2R"; version="0.2.1"; sha256="0a7h9wb8dqjgzyk4hd9ivhy90n80wrrp4zkrxnvgfvza1619qd52"; depends=[ggplot2 gridExtra lattice latticeExtra MASS mvtnorm reshape2 splines2]; }; nonmemica = derive2 { name="nonmemica"; version="0.9.0"; sha256="1vn70qynw2j2sf0z55dr9cl0inqzdk48xybsavcivn5dbl5lzzg2"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; nonneg_cg = derive2 { name="nonneg.cg"; version="0.1.6"; sha256="15361k0kjy1465s8pr9jb5jy22mibi37zcnza7mbfh5l66hr29kh"; depends=[Rcpp]; }; @@ -10669,7 +10884,7 @@ in with self; { notifyR = derive2 { name="notifyR"; version="1.02"; sha256="0jx76ic5r1crcgg0n0yqnka0gwniflfxakh838a98j9wb11wi6h5"; depends=[RCurl rjson]; }; notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; nowcasting = derive2 { name="nowcasting"; version="1.1.4"; sha256="1nj34cbkv1xlhmcfhxs32shv00mz02rp95xj59qkq5by53sx8qwq"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL vars xts zoo]; }; - noweb = derive2 { name="noweb"; version="1.0-4"; sha256="17s65m1m8bj286l9m2h54a8j799xaqadwfrml11732f8vyrzb191"; depends=[]; }; + noweb = derive2 { name="noweb"; version="1.1-2"; sha256="1h0v92l5jzgiy5rz33pan1l6rb3mykckmvn5c8jm3hhph6ipgqad"; depends=[]; }; np = derive2 { name="np"; version="0.60-9"; sha256="1z4jcpx8bbgwslv42wrphfd1qfq965qjn0kmfxm5f6hbbycahcgy"; depends=[boot cubature quadprog quantreg]; }; npExact = derive2 { name="npExact"; version="0.2"; sha256="055wm5lcj98wb71lqp2zdyl8kkwvi6lwmnaylynvr907xqabaqvd"; depends=[]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; @@ -10690,12 +10905,12 @@ in with self; { npmlreg = derive2 { name="npmlreg"; version="0.46-5"; sha256="1f0bzccmral2y56aih37gmi6mjww6wmp2a8z6yxm501fgj2lgzfc"; depends=[statmod]; }; npmr = derive2 { name="npmr"; version="1.2"; sha256="073i9zcnyp8l5fxblx2sfyn0b4lr6i595q6kl6ispvzmylwqj8na"; depends=[]; }; npmv = derive2 { name="npmv"; version="2.4.0"; sha256="04lfks2rlax59gxdnbgkpmk2vaax718z6hkgsvmyxf52iby6rvlr"; depends=[Formula]; }; - npordtests = derive2 { name="npordtests"; version="1.1"; sha256="1g8s9nmqqawq65hvpg82c78l3ffsih057665hw98mkipqb9r0vs5"; depends=[]; }; + npordtests = derive2 { name="npordtests"; version="1.2"; sha256="1axzcyy45h3rs67m0i3cvwbmza1mnmraxan9j4zlpxdd5x9nz4h8"; depends=[]; }; nppbib = derive2 { name="nppbib"; version="1.1-0"; sha256="1dcqcf2jhlz3n4d2kjix8wray9c7yaawfdbdg9lcrih1m7b8gmsy"; depends=[]; }; npphen = derive2 { name="npphen"; version="1.1-0"; sha256="0pbf9sqdapl5q09g1hj5hi4j2wigrd0b6s0gbv1gx4wn68alrals"; depends=[ks lubridate raster rgdal rts snow]; }; npreg = derive2 { name="npreg"; version="1.0-0"; sha256="0idbradahyj6qm7nqrhvnfzly38x4apnbxslkk2i15ldvv50bfh7"; depends=[]; }; npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; - nprobust = derive2 { name="nprobust"; version="0.1.4"; sha256="0ndn1a54i7zk7ixyimm1jdviz3x5l3qa0rpgsdd30jqv8fldfjpz"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + nprobust = derive2 { name="nprobust"; version="0.2.1"; sha256="086x6p4ipd910nnm2whsvbjkvmjny69ryh0lw0j5jjq2ddah5p1i"; depends=[ggplot2 Rcpp RcppArmadillo]; }; nproc = derive2 { name="nproc"; version="2.1.4"; sha256="1gj38yppip0ygxcgp0x9ba9kpr12ahmz2k0956x3h7py2rl8b098"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; }; nprotreg = derive2 { name="nprotreg"; version="1.0.0"; sha256="06n82i5m7sgfj759zdwwh8fqybkbchvnaaqcds64m6hbms592bh3"; depends=[expm]; }; npsf = derive2 { name="npsf"; version="0.5.2"; sha256="0iz4dh2cv1bi90wdf08x70rdm44xmzblck69rlg7vnsb6n2q2is9"; depends=[Formula randtoolbox Rcpp sfsmisc]; }; @@ -10726,7 +10941,7 @@ in with self; { numGen = derive2 { name="numGen"; version="0.1.1"; sha256="1y41wq31r8126dz1sj23smq2k6v9yqczq4ddgzqb73dsrx9dmmc0"; depends=[]; }; numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; }; numOSL = derive2 { name="numOSL"; version="2.6"; sha256="03h1p56650x4my5vq5jlmjsz5xj0w2j75qfr08rh7nr38dwgp1k8"; depends=[]; }; - numbers = derive2 { name="numbers"; version="0.7-1"; sha256="1k5a24pnjhn3h330q0s7ivk2v5dsjmg2xwlhfinzixihnwhc12xy"; depends=[]; }; + numbers = derive2 { name="numbers"; version="0.7-5"; sha256="1dz23rmjzdns4av28kk8bc9psj71q2bpcgm1m7sxnyzcxpm8hczc"; depends=[]; }; numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.5.0"; sha256="1c9vhzm4rjh8b5bkzkv1r9j2y1iqndq9ndandix28wdgn2v6lzv6"; depends=[glue]; }; nutriNetwork = derive2 { name="nutriNetwork"; version="0.1.1"; sha256="0ya95h88jkiwc7cg7ic8bmyd7b0lgnhxrywwqvi2j6m6nbvvaxzy"; depends=[glasso huge igraph Matrix tmvtnorm]; }; @@ -10734,11 +10949,11 @@ in with self; { nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; }; nvctr = derive2 { name="nvctr"; version="0.1.1"; sha256="0hjrimg0hvwgkx2hbln6k8z0f2bp9kln7mxxh623qjp0hg4mcvcn"; depends=[magrittr pracma]; }; - nvmix = derive2 { name="nvmix"; version="0.0-1"; sha256="13pp664n5f06gavny586xrwm1n18jndr0hlqx5fdy68n6py0vz9r"; depends=[qrng]; }; + nvmix = derive2 { name="nvmix"; version="0.0-2"; sha256="18825p8hdrfiznjkgx26i2qmhpyj9ky1kc4k2az7d29pnrjnyjdg"; depends=[Matrix qrng]; }; nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; nycflights13 = derive2 { name="nycflights13"; version="1.0.1"; sha256="0h4jzg4q5qpvjp5b2wlk3a2mh0jhyz9c1acdjcmg70pap7fyh0fj"; depends=[tibble]; }; nzelect = derive2 { name="nzelect"; version="0.4.0"; sha256="19kcbq454yg9g76ix7v3nibgw2203d7vv6f2d6d2zkcc0h08bjm7"; depends=[]; }; - nzilbb_labbcat = derive2 { name="nzilbb.labbcat"; version="0.2-2"; sha256="0424kf53wrs8q5iqs08zbq6srjnz7z5pakz98fmvznlv9ximzvhc"; depends=[httr jsonlite rstudioapi stringr]; }; + nzilbb_labbcat = derive2 { name="nzilbb.labbcat"; version="0.3-1"; sha256="03n0j9xb3qgjrqwh8rw5vqyf71223knhfvb7bki4zp2hm00k9ywq"; depends=[httr jsonlite rstudioapi stringr]; }; nzpullover = derive2 { name="nzpullover"; version="0.3.0"; sha256="0b3mz5i58m48fa1x7gv4l3gqj0gvrar201ph2l1gkbcnfmazwjp8"; depends=[]; }; oXim = derive2 { name="oXim"; version="1.2.2"; sha256="1hi4ps36amvgqgj64yc3cvy4sx32z1az6lk5yy1sciy6074k5byb"; depends=[gstat imagine R_matlab sp]; }; oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; }; @@ -10759,17 +10974,17 @@ in with self; { obs_agree = derive2 { name="obs.agree"; version="1.0"; sha256="191xshnrncjqzwd2rdq334vsx0338q3y3k1nbm04hdaysbnla9jv"; depends=[]; }; obsSens = derive2 { name="obsSens"; version="1.3"; sha256="1vfm1mzsycwkqa39vf3fcdv1s6adps9hw1rxlvl8v9kq746hcabw"; depends=[]; }; observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; - oc = derive2 { name="oc"; version="1.01"; sha256="12idrh4jxxq28lgqzr6jzgrvmmwysh5amzhmmaqn3yz49i17gcaf"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.1"; sha256="1aka29qqwbd494kvi15yyyqkb9hks4ky2gcvykxhx2drm2fnsn4g"; depends=[]; }; oce = derive2 { name="oce"; version="1.1-1"; sha256="0hwfnpb6q6pmckzgh67ryvqd1jkrzzhn187x1655rnmkmp9zis1c"; depends=[gsw Rcpp testthat]; }; - oceanis = derive2 { name="oceanis"; version="1.0.4"; sha256="1wdqfbvl0d92s0rpc3l9vnck5ln9q144msbb60n6bgra9w6vx8b0"; depends=[classInt dplyr DT foreign ggplot2 leaflet leaflet_extras lwgeom mapview munsell readODS sf sfc shiny shinyBS shinyjs shinythemes stringr tidyr units xlsx]; }; + oceanis = derive2 { name="oceanis"; version="1.0.5"; sha256="0fdcrwyv8idnspx1z82x92jh8iy58dcbqz97kammbs74ywjsgq34"; depends=[classInt dplyr DT foreign ggplot2 leaflet leaflet_extras lwgeom mapview munsell readODS sf sfc shiny shinyBS shinyjs shinythemes stringr tidyr units xlsx]; }; oceanmap = derive2 { name="oceanmap"; version="0.1.0.1"; sha256="0cdv5rizrlbzz1ifcqh726kmki0j68w829k9f0cfnckmh3rwj2y6"; depends=[abind extrafont fields lubridate mapdata maps maptools ncdf4 plotrix raster sp]; }; + oceanwaves = derive2 { name="oceanwaves"; version="0.1.0"; sha256="0izgnqjji3xrvv8xbpsdbrx53wdb3rg3045xx6gcknfl2fj5iky7"; depends=[bspec ggplot2 signal]; }; ocedata = derive2 { name="ocedata"; version="0.1.5"; sha256="0rs3nzacvg5mbbmbhcj8g9ikjlw26x2mka7lp644l17kgmzzynh6"; depends=[testthat]; }; ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; oclust = derive2 { name="oclust"; version="0.1.0"; sha256="005ml6vhi9rw6js2v4f1dc2ci8kcd7iwrkgbs4c1qxc836ygq0yx"; depends=[entropy mclust]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; ocp = derive2 { name="ocp"; version="0.1.1"; sha256="0q52s8j3z3xwnma3sxx6019qxid66bf0a43w4g8xjagplwps57dx"; depends=[]; }; - odbc = derive2 { name="odbc"; version="1.1.6"; sha256="146phrsks0hfd1bfxx452kkq7ximk3fwjz9lqg9fdykar5sr6vjj"; depends=[BH bit64 blob DBI hms Rcpp]; }; + odbc = derive2 { name="odbc"; version="1.2.0"; sha256="12crw6xxyd1cj911ihkfifrpwvdl4jjpjzi7l8pi6y658r2q5mdx"; depends=[BH bit64 blob DBI hms Rcpp rlang]; }; odds_converter = derive2 { name="odds.converter"; version="1.4.8"; sha256="09s8pg55gpsxmrbimzg5rsr1n07la93781sar6vab5p9zn9zxgx4"; depends=[]; }; odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.1"; sha256="0kgdv4m14h4a16b0k2s2qjyjn0kxk5sf4qkbi6ikm6kqdh5ashp4"; depends=[MASS]; }; oddsratio = derive2 { name="oddsratio"; version="2.0.0"; sha256="0lr56djlw52j3azvifcdbyn01b85jv18gm789s7skmnylrl3rgw9"; depends=[ggplot2 mgcv stringr tibble]; }; @@ -10778,12 +10993,12 @@ in with self; { odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; odpc = derive2 { name="odpc"; version="2.0.1"; sha256="06d574sj7p5qlf7s3lbrwd56mcs4lq3pn9bkzwxhpybibgrfzn5q"; depends=[doParallel foreach forecast Rcpp RcppArmadillo]; }; odr = derive2 { name="odr"; version="1.0.0"; sha256="0niadinljx5pph329dgixivdc9s1l27ik9755fbfhmplhj92ihi2"; depends=[]; }; - oem = derive2 { name="oem"; version="2.0.9"; sha256="1ffv71cwf58wrba3zhyp443kfl0j3z451mgxsxl8ig5fn9y9i9ca"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; ofGEM = derive2 { name="ofGEM"; version="1.0"; sha256="0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k"; depends=[CompQuadForm forestplot MASS]; }; - officer = derive2 { name="officer"; version="0.3.5"; sha256="005kaxjhr40shpav2pg7s7gj8f49579r7rbgwlncbwv16nn0rbbg"; depends=[base64enc digest htmltools magrittr R6 Rcpp rlang uuid xml2 zip]; }; + officer = derive2 { name="officer"; version="0.3.6"; sha256="1i6jmnbkx7gd0qyf6akhizmxp7y1dh3h7a886mcbmrzka9d60zh4"; depends=[base64enc digest htmltools magrittr R6 Rcpp rlang uuid xml2 zip]; }; offlineChange = derive2 { name="offlineChange"; version="0.0.2"; sha256="1d8jm8mm8g1fcbffk697qap58dcw3yyvrm9daviy42jsz59nbsxs"; depends=[Rcpp]; }; oglmx = derive2 { name="oglmx"; version="3.0.0.0"; sha256="13axmhbqhv4kkcdsdmp9r7p0d0kyqlsaqgyyllbkxlxb4hfz79b6"; depends=[maxLik]; }; - ohtadstats = derive2 { name="ohtadstats"; version="2.1.0"; sha256="17fpfqpvmyh2ykyb56g2zc72f8d8x7d85wmdm63n7b9kr53lscj3"; depends=[lattice]; }; + ohenery = derive2 { name="ohenery"; version="0.1.1"; sha256="0i7cc110c30y7dm86srh2xkikkmlr28mvy0kkjxywxmiwnrsmzjq"; depends=[dplyr magrittr maxLik Rcpp]; }; + ohtadstats = derive2 { name="ohtadstats"; version="2.1.1"; sha256="0hkjs322vii1dsminlkwpwi12sc9pd88jag7p4dmy6nfw2hh2d69"; depends=[lattice]; }; oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; }; okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; @@ -10795,7 +11010,7 @@ in with self; { ompr_roi = derive2 { name="ompr.roi"; version="0.8.0"; sha256="1cbrchvpd31lxpxvw2l3q9k5jmffarb1shca8kwm76y5a6zxxq63"; depends=[Matrix ompr ROI slam]; }; omu = derive2 { name="omu"; version="1.0.2"; sha256="03mj5xk447gadsnvqrm97cjcyfq4xzkgc46kw85gishv7w9qmqrk"; depends=[dplyr ggfortify ggplot2 KEGGREST magrittr plyr reshape2 stringr tidyr]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; - oncrawlR = derive2 { name="oncrawlR"; version="0.1.6"; sha256="1nf5ycmfjy4d8p00clvzsinvj9y845iaqrpd1q5bv6bdc916qzbf"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rlang rlist scales sparkline tidyr webshot xgboost]; }; + oncrawlR = derive2 { name="oncrawlR"; version="0.1.8"; sha256="0l7b3gx21jli97jq0i87bkp01v1b4xmmh9k4zjhdij6412rv0rfh"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rlang rlist scales sparkline tidyr webshot xgboost]; }; onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; }; onelogin = derive2 { name="onelogin"; version="0.2.0"; sha256="06p3a8kaxmvsj8nn7dy8w6wv1jjw67is991hqg9q0fa20ifym3dl"; depends=[glue jsonlite magrittr R6 safer tibble]; }; onemap = derive2 { name="onemap"; version="2.1.2"; sha256="142yasn8pyd046d8s0k3i4ynmpq7rh6v2vjdnj88yn99zshaxfig"; depends=[ggplot2 MDSMap plotly Rcpp reshape2]; }; @@ -10814,21 +11029,23 @@ in with self; { opart = derive2 { name="opart"; version="2019.1.0"; sha256="0yw4vlip4whhvp23yjr57h5j0ii8ighp77g3fjjzr3l56slmrmcz"; depends=[]; }; openCR = derive2 { name="openCR"; version="1.4.1"; sha256="046ijw5ss8nb0m11p7r682zi7242m0ljydnsrr3gwrnmc4ayk6xv"; depends=[abind MASS nlme plyr Rcpp RcppParallel secr stringr]; }; openEBGM = derive2 { name="openEBGM"; version="0.8.2"; sha256="0v6jr1yry937knvkrn448rkilwfl7w90169lm5vnp53ds6fhh7bj"; depends=[data_table ggplot2]; }; - openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; }; + openNLP = derive2 { name="openNLP"; version="0.2-7"; sha256="15yl74wv6w1d2wwpn1xlkkpam3c62977gnqal651fv623v29gg35"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.1.0"; sha256="1cjws49r22cmdax136zcy3k35yzbajkm6pyfibgcw2iqdxy1vcxg"; depends=[data_table progress raster rgdal rgrass7 sf sp SSN]; }; openVA = derive2 { name="openVA"; version="1.0.8"; sha256="17nqh43gmhlb383ack1pbjkdfdb2g0k527zprdp1xkyxbp92v7xa"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; - openair = derive2 { name="openair"; version="2.6-6"; sha256="0ikk3f034hsqv1qxsbxnhhp827b2xpxj4r6p9k0r036f0nssgynl"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp rlang tidyr]; }; - openblender = derive2 { name="openblender"; version="0.2.0"; sha256="1awndp29gcsbrx4m4lwm32vsw2jwhkw2xjp401vx7fc3g3nsm0js"; depends=[httr jsonlite xml2]; }; + openair = derive2 { name="openair"; version="2.7-0"; sha256="1h2hyk93xvcw3i86k1kw7w9y2s39l6xnj7hjqp3wawgm4nnsr5kp"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; + openblender = derive2 { name="openblender"; version="0.3.2"; sha256="1mjmphmhbrxvz6szaphmfbdjp491z7fq18dbmd3v4v216ypfw2d9"; depends=[httr jsonlite xml2]; }; opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; + opencastR = derive2 { name="opencastR"; version="0.1.2"; sha256="0fnp4bsr35knff7q19jqmlwdnfh9qzk2zsvg92y3pg1g64fmxazv"; depends=[httr jsonlite]; }; opencpu = derive2 { name="opencpu"; version="2.1.4"; sha256="06jsymwgckgnzp49brnxb5d250kybzxggy99wlkhlfgnchdisgkh"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; opencv = derive2 { name="opencv"; version="0.1"; sha256="0m649g6k6cgxnljjx8czypjawbyzx7xjcg32wddxkrgi2b236lwh"; depends=[magrittr Rcpp]; }; + opendatatoronto = derive2 { name="opendatatoronto"; version="0.1.1"; sha256="1rabbpq1jmihrm5wz8i5pkxfhpbm8x6dk3bqj56fnkzqkmg6zwjj"; depends=[ckanr geojsonsf magrittr readxl sf tibble xml2]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; openintro = derive2 { name="openintro"; version="1.7.1"; sha256="059azlasdkmp8f54qpjf3mq5dyqakw0dgx0kx85wfdmhq38zal5n"; depends=[]; }; openssl = derive2 { name="openssl"; version="1.4.1"; sha256="1ihz2qi33lhngl19xdanq0pbmfaacy63794mg8ll7z2lab3yryzp"; depends=[askpass]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; - openxlsx = derive2 { name="openxlsx"; version="4.1.0.1"; sha256="1lflygpi1z4rlb1c6g6wsmi334maiiy7jhpg6ph4sw8lpvg12w4b"; depends=[Rcpp zip]; }; + openxlsx = derive2 { name="openxlsx"; version="4.1.3"; sha256="087zivh9xdh1kk8zci67ys0m2xq0slzwgnf0jl05yy4gsgb6nmyx"; depends=[Rcpp rlang stringi zip]; }; opera = derive2 { name="opera"; version="1.0"; sha256="0p2wg3srg088l420ykrq0wqvzh1mp6l753rdw35f7kdmaj08mqfq"; depends=[quadprog quantreg RColorBrewer]; }; operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; }; operators = derive2 { name="operators"; version="0.1-8"; sha256="0zgcv2q46qyqv4dhbd33s4044zjw38w8dqfpzs0c1lxjpkil3dnx"; depends=[]; }; @@ -10850,6 +11067,7 @@ in with self; { optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; }; optigrab = derive2 { name="optigrab"; version="0.9.2.1"; sha256="1c3q4kx8rkgpjsy0hy2w2dd9kv51avnw1ab82hzmjgngfnvaig0n"; depends=[magrittr stringi]; }; optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; }; + optimCheck = derive2 { name="optimCheck"; version="1.0"; sha256="1qjkv1mfyn7sw0dkxxcdaqj85vl71cgffpf3k3mvzy0s8yhxjb4n"; depends=[]; }; optimParallel = derive2 { name="optimParallel"; version="0.8-1"; sha256="176m425pp3jf48jip513hvbrvgjv78qzylmksqw5ks8yhylq41l9"; depends=[]; }; optimStrat = derive2 { name="optimStrat"; version="2.0"; sha256="0n9igrxyasl2h2xjsx044ma3nqbd8258psc2h6za2pw6jjwwlz4g"; depends=[cubature mvtnorm shiny]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; @@ -10863,7 +11081,7 @@ in with self; { optionstrat = derive2 { name="optionstrat"; version="1.4.0"; sha256="0mb3hsr5dxlam1a8zi337jgg0qcvhaxa84qdni0q4b4500r2yy7w"; depends=[]; }; optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; }; optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; }; - optmatch = derive2 { name="optmatch"; version="0.9-11"; sha256="0lvba8gca1bvf7b46kmjqpkb3ykip07niw1w2qghgqrfxkq0s6yi"; depends=[digest Rcpp RItools survival]; }; + optmatch = derive2 { name="optmatch"; version="0.9-12"; sha256="099135433855259n1ci5vzcr5v2szvrw09mcdb8vn1hmv9p5251v"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.6.4"; sha256="0wyrc42ja3ab5szx46zmz8lm7vzfqxkjca0m0sms8g9hqbmmay6d"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="2.3-0"; sha256="125b9sfdk4bdcj1vq5rxlrskv1zra31x8d96pdxnqvcnkmwxm4zh"; depends=[cluster labdsv MASS plotrix]; }; optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; }; @@ -10883,6 +11101,7 @@ in with self; { orderbook = derive2 { name="orderbook"; version="1.03"; sha256="0dlvjrzdhhh8js4g1lvxs46q7fdxfxavxnb4nj6xlwca75i51675"; depends=[hash lattice]; }; orderedLasso = derive2 { name="orderedLasso"; version="1.7.1"; sha256="1qywvvdbxjqq886i1gd1hsxx92zm7lbalm0acylabap5m2nf9q53"; depends=[ggplot2 Iso Matrix quadprog reshape2]; }; ordering = derive2 { name="ordering"; version="0.7.0"; sha256="0sgwgcjg6sazmi11c9qvxfrzg671kcp18i2q20xbmbj4v3yqhwbh"; depends=[]; }; + orderly = derive2 { name="orderly"; version="1.0.2"; sha256="1ak1f73bm8wifqdjiyln4jxgmpnzap7bm7kyarly4ascar82r4w2"; depends=[DBI digest docopt fs ids R6 RSQLite withr yaml zip]; }; orders = derive2 { name="orders"; version="0.1.3"; sha256="14p0wk7y9hbhxwifr4fjp3h9dll0sin8q88an6a536d4f2045j7c"; depends=[Newdistns]; }; orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; @@ -10894,8 +11113,9 @@ in with self; { ordinalNet = derive2 { name="ordinalNet"; version="2.6"; sha256="0mapkhhv5bpmfxw2dhg9lrw7lj8ha7s7yhamihga2l977ja0ma34"; depends=[]; }; ordinalRR = derive2 { name="ordinalRR"; version="1.0"; sha256="07gihg8hppxa7bp5wxcshqawj3vkzicmdsrnjyrasr3glv08b9lj"; depends=[rjags]; }; ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.6"; sha256="0axpndyyns649mwifq8f16l8n8x9nic8cv8l71ljyr2gwlm0nqz0"; depends=[survival]; }; - ore = derive2 { name="ore"; version="1.6.2"; sha256="1l1ziljgm5gwjhvjq42wi5vcwbxlaj5dl9w8bhz0wh8vx4ajj07m"; depends=[]; }; + ore = derive2 { name="ore"; version="1.6.3"; sha256="1vh6w3arrhgkfjjjw7ci91xmz4wpfr3cmwd5zkqch89dgn07skkv"; depends=[]; }; ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; }; + orf = derive2 { name="orf"; version="0.1.2"; sha256="123lx1wa3sbi5l5zy92rq30f0hqq1pjpjyaklq9n1k9z28aa7p14"; depends=[ggplot2 ranger Rcpp xtable]; }; org = derive2 { name="org"; version="2019.4.2"; sha256="0jrnr22slgzwsdb4a1jb1l878smhvfb680cgmgb3a88jqj4jfscl"; depends=[]; }; orgR = derive2 { name="orgR"; version="0.9.0"; sha256="1q4qbwnbhmja8rqiph7g7m4wxhzhk9mh91x1jgbnky8bs4ljdgrx"; depends=[data_table ggplot2 ggthemes lubridate stringr]; }; orgutils = derive2 { name="orgutils"; version="0.4-1"; sha256="1yc3avhq3786his7nd60zfbzd9inkfrfz938r8378z59zbb1mzqq"; depends=[textutils]; }; @@ -10905,7 +11125,7 @@ in with self; { orloca = derive2 { name="orloca"; version="4.8"; sha256="01fq3sas2xlp56f6s8jn5079pchszg2pbvzy8d5psxpb5jz59mwc"; depends=[knitr png rmarkdown ucminf]; }; orloca_es = derive2 { name="orloca.es"; version="4.6"; sha256="1yfsvihm8p4ggdfam50i2xg7dy7khww5qqk6g4lry3m1icwx6vsy"; depends=[orloca]; }; ormPlot = derive2 { name="ormPlot"; version="0.3.2"; sha256="0sdn7vrc35pl763snfrrcn0fa6i3agr57sjayjz93friijddkcp6"; depends=[ggplot2 gtable rms]; }; - oro_dicom = derive2 { name="oro.dicom"; version="0.5.0"; sha256="05dmhfglp76apyilwicf3n2ylyjhp1gq6b9bnzsiiblpjnfpia43"; depends=[oro_nifti]; }; + oro_dicom = derive2 { name="oro.dicom"; version="0.5.3"; sha256="1ar70xk2bqk7jgckfivgp4np3dxaynmgdg41n8x0sg9cpxl2lc38"; depends=[oro_nifti]; }; oro_nifti = derive2 { name="oro.nifti"; version="0.9.1"; sha256="19w9dzyfmfgxgxb5i0l06b6gzqksx879iwicfs76fwmb1q2ph540"; depends=[abind bitops RNifti]; }; oro_pet = derive2 { name="oro.pet"; version="0.2.6"; sha256="1dczii7knh9241ksswxk9zg1d69mhk2ilrk4kjv7cj9nfm8fgmja"; depends=[minpack_lm msm oro_dicom oro_nifti]; }; orsifronts = derive2 { name="orsifronts"; version="0.1.1"; sha256="1js4q2s1mn263x8szl5q47ajfxv9lsjd5zyphwyhbkqrnd8ijd3w"; depends=[sp]; }; @@ -10921,7 +11141,7 @@ in with self; { osmdata = derive2 { name="osmdata"; version="0.1.1"; sha256="0n297bhdb5klbk7a2n3lm4iicdggwmz82njsxqdfvzbq85j2s96v"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.2"; sha256="0k5rjxsi1sfcxcl6lf8zcncqnshz2jaz7hcwn2ifg4yhvxvkfma8"; depends=[curl e1071 ggm ggplot2 httr mapproj osmdata rgeos sp spatstat]; }; - osqp = derive2 { name="osqp"; version="0.6.0.2"; sha256="0lc56gbakh3b92rij85rmqva7i81rrgmbj5qr3h6ysm9j347zzqm"; depends=[Matrix R6 Rcpp]; }; + osqp = derive2 { name="osqp"; version="0.6.0.3"; sha256="1266n04c8zsv4ixf7y25jkccv9lx3rvmd7bnkxynbwga9psd3l0j"; depends=[Matrix R6 Rcpp]; }; osrm = derive2 { name="osrm"; version="3.3.2"; sha256="10adkq8sm0jvyd35m8vvjxiqvay976fsgffyxh9sh564l053srkp"; depends=[gepaf isoband jsonlite lwgeom RCurl sf sp]; }; osrmr = derive2 { name="osrmr"; version="0.1.35"; sha256="1pmsybyqkgpqz0yhfmwrsa2smgmclxzk9mlzcqmm8ph6dcd1x0s8"; depends=[assertthat bitops R_utils rjson stringr]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; @@ -10943,16 +11163,17 @@ in with self; { overlapping = derive2 { name="overlapping"; version="1.5.4"; sha256="1j3jmv15hy6h4d3v4rwg0796dz6np3pv67xrn2vcgvh1s1rmqnzs"; depends=[ggplot2 testthat]; }; overlapptest = derive2 { name="overlapptest"; version="1.1"; sha256="0r732za6lm7dk5r237nhadgbpinaz5dmb6f7pn3mbg0plkdy3mff"; depends=[spatstat]; }; overture = derive2 { name="overture"; version="0.4-0"; sha256="1s16x5kn0apb0w1f7hqzcsqvw3x621y5n6yr1qn7yb7431pdw3cz"; depends=[bigmemory]; }; - owdbr = derive2 { name="owdbr"; version="1.0.1.0"; sha256="1sdlvkirp15hzby26lwviz2jclggl3da8r105mr8c821377q5smy"; depends=[data_table dplyr httr jsonlite magrittr tibble]; }; + owdbr = derive2 { name="owdbr"; version="1.0.1.1"; sha256="0q4654zr5aw04sssy7127vafry72b7p3d8i44fqvqg3055awin0i"; depends=[data_table dplyr httr jsonlite magrittr tibble]; }; owmr = derive2 { name="owmr"; version="0.8.1"; sha256="11krzrkr1ga41nv9c2fb8cb2mgy3ias7qx85d4cdv4k68lsksv18"; depends=[httr jsonlite magrittr plyr tibble tidyr]; }; - ows4R = derive2 { name="ows4R"; version="0.1-2"; sha256="0zqmzv7p693zza48dijg6fah601y4r8lcp5v67p2lpi73r8vhbil"; depends=[geometa httr openssl R6 rgdal sf XML]; }; + ows4R = derive2 { name="ows4R"; version="0.1-4"; sha256="1chvb7i9a6kalnjacfvwrnp5j0fhr6da6v6llazqarij9njxfing"; depends=[geometa httr openssl R6 rgdal sf XML]; }; oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; }; oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; + ozmaps = derive2 { name="ozmaps"; version="0.2.0"; sha256="1g2kilj9m733d7mmcpslrpaahx2zbndiq8v3g37pjr08rbq7gr48"; depends=[oz tibble]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; }; pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; }; pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; }; - pCODE = derive2 { name="pCODE"; version="0.9.2"; sha256="02p2kygyqd6c55wdzzhava9qkzck01mnfa5wccbj6plrxvrpfrz1"; depends=[deSolve fda MASS pracma]; }; + pCODE = derive2 { name="pCODE"; version="0.9.3"; sha256="067hhlj75l04b404fidvb2rkj6bb3zxrjy37p5vzvc5a1p1pcnf5"; depends=[deSolve fda MASS pracma]; }; pCalibrate = derive2 { name="pCalibrate"; version="0.1-1"; sha256="04a7dmf9sjw44y53i469f8fjm8as2vwr0pgk4s91l63pxdqnjvfl"; depends=[epitools exact2x2 MCMCpack]; }; pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; }; pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; @@ -10970,9 +11191,9 @@ in with self; { packHV = derive2 { name="packHV"; version="2.2"; sha256="0bj7zhlz2283y1hfdqdn7xil4wscwri1f5hszarwjwczx4n5sv81"; depends=[survival WriteXLS]; }; packMBPLSDA = derive2 { name="packMBPLSDA"; version="0.6"; sha256="0dnj99f8gl5qwn7xjg5jm7hj2ywdmmixbl2ak429ygilf8hlxzwd"; depends=[ade4 DiscriMiner doParallel FactoMineR foreach MASS pROC]; }; packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; - packageRank = derive2 { name="packageRank"; version="0.2.0"; sha256="13gi0n1bzpy1q1ccxsi82bpx8p25wwna3wmgm3nyi8hfwc8bbnks"; depends=[cranlogs data_table ggplot2 memoise RCurl]; }; + packageRank = derive2 { name="packageRank"; version="0.3.0"; sha256="1617xah0c8rnyjq09k69yrmalfryx921fflpx7k7bk52zwrrblc9"; depends=[cranlogs data_table ggplot2 memoise RCurl rversions]; }; packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; - packagefinder = derive2 { name="packagefinder"; version="0.1.4"; sha256="17awdf97fjlncqbglgb2cic4xxa8vpsfpsm6f2wxv7zpg4cdlg2p"; depends=[crayon formattable httr jsonlite lubridate pander stringr tidyr]; }; + packagefinder = derive2 { name="packagefinder"; version="0.1.5"; sha256="11dv9684370jnk4lsyqnqcqngrix3fwjhlhgsar6m01vvhy9w1c0"; depends=[crayon formattable httr jsonlite lubridate pander stringr tidyr]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.3.3"; sha256="0gik0splf48zfl40297nh7lbgvd2qqlci99wv841mfy7858ai933"; depends=[Rcpp]; }; packrat = derive2 { name="packrat"; version="0.5.0"; sha256="1xy5dd2hrpqa07jfl4s7dsrya05mf36ms74j833scdz0zf89586n"; depends=[]; }; @@ -10983,7 +11204,7 @@ in with self; { padr = derive2 { name="padr"; version="0.5.0"; sha256="1lckaizlffgdzs7rhlkafam2clqkn3130r4fdnanm2bvd6b0z220"; depends=[dplyr lubridate Rcpp rlang]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; pafdR = derive2 { name="pafdR"; version="1.0"; sha256="1yimsd4h23hcf752p5flda3dqk8hgn6qm9k0pmbapxj4jbsw14w5"; depends=[curl exams stringr]; }; - pagedown = derive2 { name="pagedown"; version="0.5"; sha256="0kzrak17qxbbaj20vg4c6iwynwiy5q2psqmhmzlz1xkxkmk4gmdb"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; + pagedown = derive2 { name="pagedown"; version="0.6"; sha256="0iri0mlxazkrphq45cynap0k4pnqfvl49slb4pyx5skfyyli0gvd"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; pagenum = derive2 { name="pagenum"; version="1.1"; sha256="0908rlr9sd1a2qwz0idw8ccxhji73sk24gyrdl071lpnd1rs2wl7"; depends=[]; }; pageviews = derive2 { name="pageviews"; version="0.3.0"; sha256="031y67nqqvf3fa2273m7z2cldda0ijh63qwkh4gis3hz9hfril0v"; depends=[curl httr jsonlite]; }; painter = derive2 { name="painter"; version="0.1.0"; sha256="0qr6p13h50rlavcsamxmijfr4dfrbv1k088m28qf8a4gam3ap85b"; depends=[]; }; @@ -10993,10 +11214,10 @@ in with self; { pairsD3 = derive2 { name="pairsD3"; version="0.1.0"; sha256="0ql6pqijf24pfyid52hmf5fmh4w1ca3sm47z9vknqpnjbn47v8q2"; depends=[htmlwidgets shiny]; }; pairwise = derive2 { name="pairwise"; version="0.4.4-5.1"; sha256="0j15qbpym0y9ipc4l3z95f0bzc0pgzayspyqv81p7xakksnj2y02"; depends=[]; }; pairwiseCI = derive2 { name="pairwiseCI"; version="0.1-27"; sha256="0yp9nibdrsddjqq6vdlfbpvmfgm209h99b6qqqd6wgfzng327822"; depends=[boot coin MASS MCPAN mcprofile]; }; - pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="0.1.1"; sha256="1a3kvwwq2541axiinv0k3rw79cgm8az2db7f5lwb857wd5rlzs1b"; depends=[broomExtra crayon dplyr forcats groupedstats jmv purrr rlang stringr tibble tidyr WRS2]; }; + pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="0.1.2"; sha256="0ak58v4675xhnskmjiin069gvq0sylfcv11f38mbl5c7iiai66bk"; depends=[broomExtra crayon dplyr forcats groupedstats jmv purrr rlang stringr tibble tidyr WRS2]; }; pak = derive2 { name="pak"; version="0.1.2"; sha256="05s8rg84w4xhpbaa98p3lgvsnbjrxfbcz5izgkamqa1dw4gdxml4"; depends=[assertthat base64enc callr cli cliapp crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble]; }; palaeoSig = derive2 { name="palaeoSig"; version="2.0-3"; sha256="1sn2nbiq037l81qvrqbg7gf1312g8vy574hsfng07qk1jpx7vwkk"; depends=[assertr dplyr forcats ggplot2 ggrepel magrittr MASS mgcv purrr rioja rlang TeachingDemos tibble tidyr vegan]; }; - palasso = derive2 { name="palasso"; version="0.0.5"; sha256="1ckxrkk2b8dri8pw0hj0g1sdlpwn6p436748sv86lj5b1m02yf3w"; depends=[glmnet Matrix survival]; }; + palasso = derive2 { name="palasso"; version="0.0.7"; sha256="1r7kcx0i1xqvqpqwvh5khsv3g0hj3j8f56q9jbya18scywk2ivzg"; depends=[glmnet Matrix survival]; }; paleoMAS = derive2 { name="paleoMAS"; version="2.0-1"; sha256="1hhb5wbj4m3ch8wnvd1zkl5bk6wa9nl6jl1dhm4z6yqkh29yn9z6"; depends=[lattice MASS vegan]; }; paleoTS = derive2 { name="paleoTS"; version="0.5.2"; sha256="1hd143xw16n8xhicfr6nfyfm6kyr56gyiq5vqnfzhmndjrvkpkx7"; depends=[doParallel foreach iterators mnormt]; }; paleobioDB = derive2 { name="paleobioDB"; version="0.6.0"; sha256="00bx59gv59hsdlg5x7n6n68av0m4brw2d02caifzgy79cfln5rha"; depends=[gtools maps plyr raster RCurl rjson scales]; }; @@ -11009,7 +11230,7 @@ in with self; { palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; palm = derive2 { name="palm"; version="1.1.3"; sha256="1w13a1517h9dqfkc0863fsb08mapx8cafypk3b61djh69hcpbl0v"; depends=[gsl minqa mvtnorm R6 Rcpp spatstat]; }; palmtree = derive2 { name="palmtree"; version="0.9-0"; sha256="0cd5p82gp2g1zq8kf9ybi4wa1r2jg4dbxbp5n01qs4apmyyncl4d"; depends=[Formula partykit]; }; - palr = derive2 { name="palr"; version="0.0.6"; sha256="163c0kcsl0k3fp5q9afv3pb8246j2b3jzmd6g2vcgxb8nhs8wr2f"; depends=[]; }; + palr = derive2 { name="palr"; version="0.1.0"; sha256="1v0bajsnzqamx9y275qhvzp56vzzs3hyp4mr5ijqynqj4376fqys"; depends=[]; }; pals = derive2 { name="pals"; version="1.5"; sha256="0zc4dw8ipvhdm2qvy71k16vf8fmjs08nqbvvdi1k8h4fs648ddhi"; depends=[colorspace dichromat mapproj maps rgl]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="0.9"; sha256="01dv70ca3zif2b2fkx4xjl24x9p9kc63wf0dj5agdjp5qgbkp1p5"; depends=[gmodels lattice lme4 lmerTest mvtnorm]; }; @@ -11017,8 +11238,9 @@ in with self; { pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.56.1"; sha256="0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.6"; sha256="1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"; depends=[]; }; + pancor = derive2 { name="pancor"; version="0.1.0"; sha256="16yiyqjzrqxqms3xyzg1c6b81y94vr8m72ilga7cpvkjvdpm3fbk"; depends=[ggplot2 rlang]; }; pander = derive2 { name="pander"; version="0.6.3"; sha256="1bd9sdghlsppmff18k5fg3i0visq9f4wc82rlhwq5m82bmgdgnyi"; depends=[digest Rcpp]; }; - pandocfilters = derive2 { name="pandocfilters"; version="0.1-3"; sha256="1qic94kmw6qqdzy362x2wiba5l3ghc4vh8wfbg7abzb04ysbdznf"; depends=[jsonlite]; }; + pandocfilters = derive2 { name="pandocfilters"; version="0.1-4"; sha256="1nlnvnvq3zwzpf6hnf8akl0w25kr7hrbr98rw5vgncxw35314xdp"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; panelView = derive2 { name="panelView"; version="1.1.2"; sha256="0kbh2g8yynv2mvvndy89lkm5yhy2hr04z52i2ccv9yfrkyignlfp"; depends=[ggplot2 gridExtra]; }; panelWranglR = derive2 { name="panelWranglR"; version="1.2.13"; sha256="0zj0m08518zi6xsa7qik61ys1qqa2lqiar4l7acclkw58w5zrmbc"; depends=[caret data_table Hmisc]; }; @@ -11039,13 +11261,14 @@ in with self; { parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; }; paramGUI = derive2 { name="paramGUI"; version="2.1.3"; sha256="1z7k4wgzm1bga8djyk44r1kr1mzdb9mrd6fvb5nrd69d76pvldji"; depends=[colorspace fields shiny shinydashboard TIMP]; }; - parameters = derive2 { name="parameters"; version="0.2.0"; sha256="1mgggb3l67wgjiccq4y84wbs2dw9qk01akd553yiwbwky9rpawgh"; depends=[bayestestR insight]; }; + parameters = derive2 { name="parameters"; version="0.3.0"; sha256="0ifb9g1h8sn661q7jf9d8glk58gxdcym5ywbmx7phwn0y3is5wdv"; depends=[bayestestR insight]; }; paramhetero = derive2 { name="paramhetero"; version="0.1.0"; sha256="16ydhp401f1iqh2b8gdi100j5dncb7khb8c6f81dak4hhs8lv4if"; depends=[ggplot2 ggpubr]; }; paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; }; paran = derive2 { name="paran"; version="1.5.2"; sha256="0d9la83mxfpfgdfrqa40ck5fcp3j2b70d8c8nl9wmdsgvgqrl23s"; depends=[MASS]; }; parboost = derive2 { name="parboost"; version="0.1.4"; sha256="087b4as0w8bckwqpisq9mllvm523vlxmld3irrms13la23z6rjvf"; depends=[caret doParallel glmnet iterators mboost party plyr]; }; + parcats = derive2 { name="parcats"; version="0.0.1"; sha256="0bf1kqg3954z47cb4n4wv6pf55f1801qlsj1523ac0j3l3i39xn5"; depends=[dplyr easyalluvial forcats htmlwidgets magrittr purrr stringr tibble tidyr]; }; parcoords = derive2 { name="parcoords"; version="1.0.0"; sha256="15w0g789a2igagfrgv1978ib4ipxpfkid5jpj4q344mpdvgp6ip2"; depends=[crosstalk htmlwidgets]; }; parcor = derive2 { name="parcor"; version="0.2-6"; sha256="10bhw50g8c4ln5gapa7wghhb050a3jmd1sw1d1k8yljibwcbbx36"; depends=[Epi GeneNet glmnet MASS ppls]; }; parfm = derive2 { name="parfm"; version="2.7.6"; sha256="1n548gaf62m56n8rlcz1mhpqxikd33vydjwl4wps441drp1dbvs0"; depends=[msm optimx sn survival]; }; @@ -11058,7 +11281,7 @@ in with self; { parsedate = derive2 { name="parsedate"; version="1.2.0"; sha256="0gb3w6hmwxayhijpf36p5dk4h6bbdps57x3cgikwvvxkgi83rarr"; depends=[rematch2]; }; parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; }; parsetools = derive2 { name="parsetools"; version="0.1.1"; sha256="0fl06h4aph0rr55n3c4gw9wkblvjipgyl5drpycmpldj8kix1nz2"; depends=[]; }; - parsnip = derive2 { name="parsnip"; version="0.0.3.1"; sha256="1p0md1s08dd8w3md1cx8n00rfpbnsayqv0bnvc9mcwljmmw6wb2s"; depends=[dplyr generics globals glue magrittr purrr rlang tibble tidyr vctrs]; }; + parsnip = derive2 { name="parsnip"; version="0.0.4"; sha256="08q4qq8akfp3ni4l380gan6r04c8ql41wpn1brciwcr4nva5ckjx"; depends=[dplyr generics globals glue magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partialAR = derive2 { name="partialAR"; version="1.0.11"; sha256="1x7vsrjn91nr4bbkzz9mp8h93j9yhwwaqw1abh5n3bsrkq3xmgqj"; depends=[data_table ggplot2 KFAS MASS plot3D Rcpp tseries urca zoo]; }; partialCI = derive2 { name="partialCI"; version="1.2.0"; sha256="0hi936yg4g5bg61ix2i68f8q4c5nvvshl2728ynz1rl970qfcrp7"; depends=[data_table ggplot2 glmnet KFAS MASS partialAR Rcpp TTR zoo]; }; @@ -11069,7 +11292,7 @@ in with self; { partitionComparison = derive2 { name="partitionComparison"; version="0.2.5"; sha256="0wzg2r4c61fd3cp8kwsc313gwcizh5aavw361lc9gqn57p1kml1j"; depends=[lpSolve Rdpack]; }; partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; }; partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; }; - partitions = derive2 { name="partitions"; version="1.9-19"; sha256="1pklfnjdc094c8nzkqcdvqzdh8v3p5n8jbg4pf9678iw648saiyx"; depends=[gmp polynom]; }; + partitions = derive2 { name="partitions"; version="1.9-22"; sha256="1qqy4df28wy4q0g572azrj171jlhvrnzbh7x0wr2g7v6gr20y0ns"; depends=[gmp polynom sets]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; }; party = derive2 { name="party"; version="1.3-3"; sha256="1sbwpwxdz81ikp64kc0s06vdwy04bccff2kr0phwx9235nhfwwlz"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; @@ -11077,6 +11300,7 @@ in with self; { parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; pass_lme = derive2 { name="pass.lme"; version="0.9.0"; sha256="1rxm509vnkdvdxii4jwniirdb2pv90rjkf6wjc9zrjh88jrl678k"; depends=[]; }; passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; }; + passt = derive2 { name="passt"; version="0.1.0"; sha256="1znf911l1flk8yw2kwbf9kvq5b8hrxangsb1fff4fx5g0bvjb2rb"; depends=[dplyr magrittr rlang tidyr]; }; password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; }; pastecs = derive2 { name="pastecs"; version="1.3.21"; sha256="0z4dic94ar646w7zc2ggi5hgvf2qnznsani94c5pyql8zspz47lc"; depends=[boot]; }; pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; @@ -11084,41 +11308,42 @@ in with self; { patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; }; patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; + patchwork = derive2 { name="patchwork"; version="1.0.0"; sha256="0qrwbcswh7ylrmghi17k6wk7w51cz6mcmvcyyd41hy3m2ywmkywb"; depends=[ggplot2 gtable]; }; patentsview = derive2 { name="patentsview"; version="0.2.2"; sha256="003pcddz6adsh893xvlb9d72r316z14nlp3fwm1vbc50hpa24w6z"; depends=[httr jsonlite]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9.1"; sha256="018frv1n3x0bf1682jibnm5k2dlkg85xa9mps28l22a0z8bplbv5"; depends=[shape]; }; - pathfindR = derive2 { name="pathfindR"; version="1.3.0"; sha256="1pljw5pz6g1jpk92smbmzwgwx7p3jvjyvr7fciajay39gfvj7fd5"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 igraph knitr org_Hs_eg_db pathview rmarkdown]; }; + pathfindR = derive2 { name="pathfindR"; version="1.4.1"; sha256="1m4hrchhmy9qjkilz520az7h2ga5552kqx64cl4c31pw7zy4p1vx"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 ggraph igraph KEGGgraph KEGGREST knitr magick org_Hs_eg_db R_utils rmarkdown]; }; pathlibr = derive2 { name="pathlibr"; version="0.1.0"; sha256="0z8iz765fi1s2770p7dwwv2anihfw86kb5dwg081wb6474wiq6v8"; depends=[glue logging magrittr purrr R6 rlang]; }; pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; }; pathmox = derive2 { name="pathmox"; version="0.2.0"; sha256="0hcllnpjjays35yngz309f1gcx9qg5z9h302kg9mhxs90470x4w0"; depends=[plspm tester]; }; patrick = derive2 { name="patrick"; version="0.0.1"; sha256="16r0q3d9bq06393v46gabn9y9w2w7nqjcl65b7y2ryp35nv0aqsi"; depends=[dplyr purrr rlang testthat tibble]; }; patternator = derive2 { name="patternator"; version="0.1.0"; sha256="0s4vrhdfblllnhpz2awhhrkwm8d4170xg7fpsp7kvvqy8z8biwvi"; depends=[data_table]; }; patternize = derive2 { name="patternize"; version="0.0.2"; sha256="0hd6l66ybrjjndad5m2li9qqsjd0k2blhvjm469j6ab95073zq9f"; depends=[abind dplyr imager magrittr Morpho purrr raster rgdal RNiftyReg sp vegan]; }; - patternplot = derive2 { name="patternplot"; version="0.2.1"; sha256="0ixb9x32fciwxwxnna47z9jb6s1zf3d9jqfiwvv4slaygi2cgydr"; depends=[dplyr ggplot2 gtable jpeg png R6 Rcpp RcppParallel]; }; + patternplot = derive2 { name="patternplot"; version="0.3.2"; sha256="0bzy1fq9za1251h8iiixyq397wnw9k3s59i3wi2pyjca2dydhr9a"; depends=[dplyr ggplot2 gridExtra gtable jpeg png R6 Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; pavo = derive2 { name="pavo"; version="2.2.0"; sha256="0bbmgjc63i6vx0grs97y6jg9q44vnjhik93zzkagq532mnggjiqv"; depends=[cluster geometry magick pbmcapply plot3D rcdd sp viridisLite]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; pawls = derive2 { name="pawls"; version="1.0.0"; sha256="01sf1cmd216ca5iwmw4hfnxi9lvh16r441cfcaa3n77zhq0i4w7n"; depends=[]; }; - paws = derive2 { name="paws"; version="0.1.4"; sha256="0qz1h7mys6mpf4yl53x7m2lvp9s4i31axqky24mi41j87g67bsag"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; - paws_analytics = derive2 { name="paws.analytics"; version="0.1.4"; sha256="08ifbx7958ibb3x59xzxj73inrq1iqj5g6q9a0pdk4iihg828ill"; depends=[paws_common]; }; - paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.4"; sha256="04szgz9lmnp5nafknsqdkpa40x5d2qgwyiib5gvi2vp2a97nl0k4"; depends=[paws_common]; }; - paws_common = derive2 { name="paws.common"; version="0.2.2"; sha256="0fax6brbj5pkcbj11r9jizn8zx993rbwdpfl84vajxdqqq6q461y"; depends=[base64enc digest httr ini jsonlite xml2]; }; - paws_compute = derive2 { name="paws.compute"; version="0.1.4"; sha256="12p7lmxjya8y73l8xynm4jnwd0ri7hh9rh5nr375y0vvf2lfvxl3"; depends=[paws_common]; }; - paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.4"; sha256="1y53ckj98hsj15r9i21gs53198a4ib7h7maf6x931gz4j8l5i3vj"; depends=[paws_common]; }; - paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.4"; sha256="0zzk8b07q2774jd7f69lszrw4iljk68fq104akvikiw96cm9786m"; depends=[paws_common]; }; - paws_database = derive2 { name="paws.database"; version="0.1.4"; sha256="0nxh9krj062zm3x7x1aqzbwv6iv7n5ivypv12xa49klv9h6cam2l"; depends=[paws_common]; }; - paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.4"; sha256="0anbhx7c47v36zzpb13myjvki4xjb04xybyg7gq2li8c0rlbnmas"; depends=[paws_common]; }; - paws_management = derive2 { name="paws.management"; version="0.1.4"; sha256="1q0bbwgsjwbqv808pyf8nz33xaqfci933ng375i8pb0bgiyqy7mz"; depends=[paws_common]; }; - paws_networking = derive2 { name="paws.networking"; version="0.1.4"; sha256="1556x2c2li0fdxrnpcblz4yijkanmmw3wshmd1ad4hbvh8xa7mqk"; depends=[paws_common]; }; - paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.4"; sha256="09kna71xaizd2878qym6lyxafjf370qh3paknv4gyzf8z43c9na6"; depends=[paws_common]; }; - paws_storage = derive2 { name="paws.storage"; version="0.1.4"; sha256="1ln3cdbp1bgsnq1s8v7kwbgx1ih5fzv3n1fglwl4yp8q3vag8ab5"; depends=[paws_common]; }; + paws = derive2 { name="paws"; version="0.1.5"; sha256="1a65az7al3vn2gxbki20zbjjvk8qyblhn720x9pgkhj822nmmvc0"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; + paws_analytics = derive2 { name="paws.analytics"; version="0.1.5"; sha256="1k4s1qd8zy852a7ggns5kzj4sdhp1jabhy34kx37py0ahl2g9zd8"; depends=[paws_common]; }; + paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.5"; sha256="10d4fmr1savpk39yd2y7k6d4pbhy0cpq97mkgqz12iing7fdg3ml"; depends=[paws_common]; }; + paws_common = derive2 { name="paws.common"; version="0.2.4"; sha256="1hzxazh3qmizm2fk38lrkc8dxkaaq2hkys4nbp1amizjxq6gga99"; depends=[base64enc digest httr ini jsonlite xml2]; }; + paws_compute = derive2 { name="paws.compute"; version="0.1.5"; sha256="03p2j7isp0p4k4jagayqbylcja3f5z26js9m9dg190azgbplpl9p"; depends=[paws_common]; }; + paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.5"; sha256="0clddz1b7ndznwdhs6nb4bi5s71jb4zyp8bk8jh91hw44g0p29bp"; depends=[paws_common]; }; + paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.5"; sha256="054bvpqyhp6j3b857ra65p6yxsq2wncfiwgw1vxpw1c5j858yvbf"; depends=[paws_common]; }; + paws_database = derive2 { name="paws.database"; version="0.1.5"; sha256="1mfvvkncqs6fb28x375g3vs4ygk2dcgzbhj0hn8x1mkv0gk7wdx5"; depends=[paws_common]; }; + paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.5"; sha256="02kq69nsd8nba48x9c0gzprw727glam22dpp094c7c91y92677np"; depends=[paws_common]; }; + paws_management = derive2 { name="paws.management"; version="0.1.5"; sha256="0mmzmzg00gg1g2sm6jcp30rxwch36gvd4hrism77g7dbp8s9kgvf"; depends=[paws_common]; }; + paws_networking = derive2 { name="paws.networking"; version="0.1.5"; sha256="08v9wlkziv7vabygfpzm8m8k7qn9n5w06i7i2d3qpsnxmqpvrwhs"; depends=[paws_common]; }; + paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.5"; sha256="0h3xi543sacl9iw7r7g431sbp48gynk7wbrsdb4y0z5250hgsjjr"; depends=[paws_common]; }; + paws_storage = derive2 { name="paws.storage"; version="0.1.5"; sha256="1nvyxlvcwaki4s3gr8sphvpahvfvzysq7n8f9dsa8c7hfa6kcfyh"; depends=[paws_common]; }; pbapply = derive2 { name="pbapply"; version="1.4-2"; sha256="1xmk4p006v8gij26rs6kp5prjyf2n32nqjxiyp8a6kvgyc4z46dc"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-13"; sha256="01ra1ggdpxdl1xqjdh86qynr5gkgzw01ww6j9bwgx4mj20i6j1ha"; depends=[rootSolve survival]; }; pbdBASE = derive2 { name="pbdBASE"; version="0.5-0"; sha256="11jlfr0pswldd5h06swfrc8bm785dv09iqgg3kfnc53yvrs0d7qv"; depends=[pbdMPI pbdSLAP]; }; pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; }; pbdDMAT = derive2 { name="pbdDMAT"; version="0.5-1"; sha256="0vg362f3wj5bmla5h85lqy5vs3q0sffcxbmbs9s0m378ahjcjqh3"; depends=[pbdBASE pbdMPI]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.3-9"; sha256="04085h8k61l3nsji13nvvq4phlcs1faiignjbqbk7pgi3194diph"; depends=[float rlecuyer]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.4-1"; sha256="1f7pjv0nqwnw74jb8hkds4as6w302mjncwjrv6jbbr81i0szncms"; depends=[float rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; - pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; }; + pbdPROF = derive2 { name="pbdPROF"; version="0.4-0"; sha256="174jwrkvw5qz1430y6id01w1czlw45j1yw8a8dyw36knrmvmdz10"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-1"; sha256="1pz71zfs9qw96dj3h5mrm734vbbi4drlv9hrw91dbzm3a7jsxg4q"; depends=[]; }; pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-6"; sha256="0165v210pyc0mh3pp6d32jg6g2zyjajgams83g03yhqmz73kd6dj"; depends=[pbdMPI rlecuyer]; }; pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-3"; sha256="1jkfcfhspvqra7vbllrvkz3jx8j7d0ang6zzcdjgpb7200sc29mf"; depends=[]; }; @@ -11128,8 +11353,8 @@ in with self; { pbmcapply = derive2 { name="pbmcapply"; version="1.5.0"; sha256="0i58gcqpnbyvc448qfgm45b7rpbmrnagsvk1h1hsqchbbicfslnz"; depends=[]; }; pbo = derive2 { name="pbo"; version="1.3.4"; sha256="0v522z36q48k4mx5gym564kgvhmf08fsadp8qs6amzbgkdx40yc4"; depends=[lattice]; }; pbs = derive2 { name="pbs"; version="1.1"; sha256="0cpgs6k5h8y2cia01zs1p4ri8r7ljg2z4x8xcbx73s680dvnxa2w"; depends=[]; }; - pbv = derive2 { name="pbv"; version="0.2-16"; sha256="1jr0xvk56d7qqpj7azw64lidwc3604iw87k7cccswv4yvbihvzzk"; depends=[Rcpp RcppArmadillo]; }; - pcFactorStan = derive2 { name="pcFactorStan"; version="1.1.0"; sha256="08lgi8j5q64nwix1npz0dw4vmzc9pfv8cdrn8jm1vsa2dazssnm4"; depends=[BH igraph loo mvtnorm Rcpp RcppEigen reshape2 rstan StanHeaders]; }; + pbv = derive2 { name="pbv"; version="0.3-19"; sha256="18cypzbyamafq942bwp3k0ml3crwcpxa6rdck8657kkc22lq05g5"; depends=[Rcpp RcppArmadillo]; }; + pcFactorStan = derive2 { name="pcFactorStan"; version="1.2.0"; sha256="15nq45p9bsmb649gp39pkq77ryzf6bcpmr70c6ijq2dda73f6265"; depends=[BH igraph loo mvtnorm Rcpp RcppEigen reshape2 rstan StanHeaders]; }; pcIRT = derive2 { name="pcIRT"; version="0.2.4"; sha256="0crll51s14nisnaxjln7bc3b1a181v358nfkh1p5iiyn98clacl6"; depends=[combinat Rcpp]; }; pcLasso = derive2 { name="pcLasso"; version="1.1"; sha256="1wdwin6xszysydspxjb8b6r3y416ri3zndh0s142b2487lhmqkb6"; depends=[svd]; }; pca3d = derive2 { name="pca3d"; version="0.10"; sha256="1bpm4sbj7h2fd0h5ybjhq8g61l8v2fbc92yiiascdgfili85zsf3"; depends=[ellipse rgl]; }; @@ -11137,7 +11362,7 @@ in with self; { pcaL1 = derive2 { name="pcaL1"; version="1.5.2"; sha256="1f7481wn2c935llb9visfdlv958ixxqybp5r2dy7nm18jacf2a0l"; depends=[]; }; pcaPP = derive2 { name="pcaPP"; version="1.9-73"; sha256="1z2kdf9gfp965xbcd4rg6vf20d1bl443na0qjkpq7gmzpaq6cifa"; depends=[mvtnorm]; }; pcadapt = derive2 { name="pcadapt"; version="4.1.0"; sha256="0631qx37ffz21bgwvjq2y5xn4dvz6kpmwg3rlmkxa93kwsx2b7rb"; depends=[data_table ggplot2 magrittr mmapcharr plotly Rcpp rmio robust RSpectra vcfR]; }; - pcalg = derive2 { name="pcalg"; version="2.6-6"; sha256="01irqkw7lv5m4svrjalpgpgp28y1m6w3jsgz0hlzwfdz2z5gkkhh"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcalg = derive2 { name="pcalg"; version="2.6-8"; sha256="1pp7y0v3li8y5q599cz10ws6nql4xqdmgxfjp69h1dmc5635kr06"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; pccc = derive2 { name="pccc"; version="1.0.3"; sha256="1dd1kh0gx7ffwnmxqn3zbcsxiav4z70psis24dgqxwq42r0kw5mk"; depends=[dplyr Rcpp]; }; pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; }; pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; }; @@ -11161,10 +11386,11 @@ in with self; { pdfetch = derive2 { name="pdfetch"; version="0.2.4"; sha256="0qskxak1mb8h038ly4hlsjvkz8nyinaraqh5f91d8nyzjzhj7x3c"; depends=[curl httr jsonlite lubridate readr reshape2 XML xml2 xts zoo]; }; pdfsearch = derive2 { name="pdfsearch"; version="0.3.0"; sha256="0mk1s8b7cdz025xn9kg5xnw388sndhjm80ckf71daxviknrzcscf"; depends=[pdftools stringi tibble tokenizers]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; - pdftools = derive2 { name="pdftools"; version="2.2"; sha256="1cvmr33jx09r7d76q0g8bd0ik4xa304n42b7psw1lj8a3a4wrk0l"; depends=[qpdf Rcpp]; }; + pdftools = derive2 { name="pdftools"; version="2.3"; sha256="1v193v74higrkafcn96wank86wixnb0p9x3z2j2ddlvypc355i69"; depends=[qpdf Rcpp]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; pdp = derive2 { name="pdp"; version="0.7.0"; sha256="0wcszaq4c14f9a2r1gd32mzhs035jlg2w8mkfklzigcj7fv9xmi8"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; + pdqr = derive2 { name="pdqr"; version="0.2.0"; sha256="1wcsdx0nns5vb0gksmykhyrn0y00x9b8m4d05dxllyvx9xika1n5"; depends=[]; }; pds3 = derive2 { name="pds3"; version="0.5.0"; sha256="1hipi4ygk30khrrslxq3m9qdichazhrl34k444shs7gi6wjx9ilr"; depends=[rly]; }; peRiodiCS = derive2 { name="peRiodiCS"; version="0.5.0"; sha256="1366gmn6qfciwcjsfnbl3hfa16ffn11g00fm0kv74ilvm3nnawk3"; depends=[Hmisc rms]; }; peRspective = derive2 { name="peRspective"; version="0.1.0"; sha256="1zz3znzaa80k60jddys5fhxwx4c8lyqymx5fw2zvj654rnk0mmzc"; depends=[crayon dplyr glue httr jsonlite magrittr purrr rlang rlist stringr tibble]; }; @@ -11173,7 +11399,7 @@ in with self; { peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pear = derive2 { name="pear"; version="1.2"; sha256="1ixmyzm72s18qrfv2m8xzh5503k1q90lhddq4sp46m0q7qyxb192"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-2"; sha256="0x8bnlzgmfah8lzdg8skxs7bm8yq0nkrhqi7q43h902j4jl5b8jy"; depends=[]; }; - pec = derive2 { name="pec"; version="2018.07.26"; sha256="07xr22klvmxpn2k72mjd775fs89f5hppb5xcy4sjy1njalmn3icm"; depends=[foreach prodlim rms survival timereg]; }; + pec = derive2 { name="pec"; version="2019.11.03"; sha256="1h6fk3k9w61a9xqhvkm1zdv75nsl06n78036qvcxkcf0bkfxl360"; depends=[foreach prodlim rms survival timereg]; }; pedantics = derive2 { name="pedantics"; version="1.7"; sha256="14hphziwqrq4fkxlvp94j564q19k9fabvhmdz7zhb6cvak6xv1n6"; depends=[genetics kinship2 MasterBayes MCMCglmm mvtnorm]; }; pedgene = derive2 { name="pedgene"; version="3.2"; sha256="1cl95fw6wdh4k6rg1nlydh09gf96pcgyfd3bxdcaisq0vfn05g0j"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; @@ -11181,11 +11407,14 @@ in with self; { pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; pedmut = derive2 { name="pedmut"; version="0.1.0"; sha256="0b8qlcl4g8kjix4q1drs1yk7wnilxqslv4p8svyabcg8wb4bnvwa"; depends=[]; }; pedometrics = derive2 { name="pedometrics"; version="0.6-6"; sha256="1w9wa73wva6z0d56g221l8qmc5igfypwsa2xq4sn4r501bdy8qpq"; depends=[lattice latticeExtra Rcpp]; }; + pedprobr = derive2 { name="pedprobr"; version="0.1.0"; sha256="1nn8pmxzj1lnfynaws87lbrk2p5y8im4cdm46vw91lbk00z7j3vc"; depends=[pedmut pedtools]; }; pedquant = derive2 { name="pedquant"; version="0.1.2"; sha256="18shjp241ihy01ksmp2sqrpq5y693njml4wqaayypb961s1850kj"; depends=[curl data_table ggplot2 gridExtra httr jsonlite readr readxl rvest scales stringi TTR webdriver xml2 zoo]; }; - pegas = derive2 { name="pegas"; version="0.11"; sha256="0l21bapzbjcvblbvks3jh9rpy9hng1ccd7f0glhqw695lc737bpx"; depends=[adegenet ape]; }; + pedtools = derive2 { name="pedtools"; version="0.9.1"; sha256="1qki2yf0dy9yl7b0n8va2knzpjnrai4v5qg6538kqsbpx1i9rxcy"; depends=[kinship2]; }; + pegas = derive2 { name="pegas"; version="0.12"; sha256="0sb8cmz4d238mcb56hv9fa0cagm00k82r7aj4cj4lxa1flxlpy8p"; depends=[adegenet ape]; }; pems_utils = derive2 { name="pems.utils"; version="0.2.26.4"; sha256="13d5cg2wdz84inby017bra6xzwhkp5qcy1b213r387fq771h2xrx"; depends=[baseline dplyr ggplot2 lattice latticeExtra loa RColorBrewer Rcpp rlang]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; + penPHcure = derive2 { name="penPHcure"; version="1.0.1"; sha256="0d5sz5027dvjgp4zc9qjlidplldpq4y18rfiq2wxxcrba7xp8yvp"; depends=[MASS Rcpp RcppArmadillo Rdpack survival]; }; penalized = derive2 { name="penalized"; version="0.9-51"; sha256="1zcrwa93mc27qj3g4ayc2k895r6g8q0g6qb2azmvj7wqk750va7a"; depends=[Rcpp RcppArmadillo survival]; }; penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; penalizedSVM = derive2 { name="penalizedSVM"; version="1.1.2"; sha256="03zw95bc6svbnzak9x72s3b8l9gh581mxn2di1fl89gxlh864amd"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; @@ -11202,7 +11431,7 @@ in with self; { perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; perccalc = derive2 { name="perccalc"; version="1.0.3"; sha256="0x895b75fjipzv7ff9mz7qpcabm9zys3bjsalk6h2q2350lwjmq1"; depends=[broom dplyr magrittr multcomp purrr tibble tidyr]; }; perfectphyloR = derive2 { name="perfectphyloR"; version="0.1.3"; sha256="05awwlsams9qc75hxl362scjsfz65kd250a5a545yniljr6wm6zl"; depends=[ape dendextend HHG phytools Rcpp RcppArmadillo]; }; - performance = derive2 { name="performance"; version="0.3.0"; sha256="13j74ffhx950kacs86ixx84nviq9qlwzr7hjnhkmzw2hspjxq99w"; depends=[bayestestR insight]; }; + performance = derive2 { name="performance"; version="0.4.0"; sha256="0lxpmp9smn5r3xvfik36nr608wcpmmximjh0v2sckyvjf7hnb4s0"; depends=[bayestestR insight]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; periscope = derive2 { name="periscope"; version="0.4.6"; sha256="0544b525nbq26sr5zwxgvcw9mpg6v4qgbzjjji5xirzfj0ra1v1h"; depends=[DT ggplot2 logging lubridate openxlsx shiny shinyBS shinydashboard]; }; @@ -11213,12 +11442,12 @@ in with self; { permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; permubiome = derive2 { name="permubiome"; version="1.2"; sha256="0np10qhj5rl2gjmq5sfnpaqymmr0wag2b8fwyzndjflvypfmcsyp"; depends=[ggplot2]; }; permuco = derive2 { name="permuco"; version="1.0.2"; sha256="0mms11j2x3rw7c9pq2pb2wvcvx0a14p20clysa2b081xgmzx3971"; depends=[Matrix permute]; }; - permutations = derive2 { name="permutations"; version="1.0-4"; sha256="1i40impzc6vd3zbrhw8jflsafp8brc60hl2vswn6a8qan4k8p2jn"; depends=[magic numbers partitions]; }; + permutations = derive2 { name="permutations"; version="1.0-5"; sha256="0891yqrj45fn11762d4an3bri8ihlxf0102z06mbfdy4hf8582h0"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-5"; sha256="0ra8p5mf2590azrkas8z2ry7mif77xqxd29n4zgyi5vll225726j"; depends=[]; }; permutes = derive2 { name="permutes"; version="1.0"; sha256="1lrhlqwv1y2vgklgwp16jw90vmgifnp4rlxw55hhj8gs97agv5y8"; depends=[ggplot2 lmPerm plyr viridis]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; - personalized = derive2 { name="personalized"; version="0.2.4"; sha256="0yn07mxngyx0vnxn47h6pnfn1g9rp5kd30yd4hcsrw03hvbdsb35"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; + personalized = derive2 { name="personalized"; version="0.2.5"; sha256="073mi3g0khba1s8wz01h1xc0zxq0yr05nflf15nss2rv7lh2qazb"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.10"; sha256="07c84x67hzyr70zkmd00f4gxqzcrpizc7w7h2hs22xy6p719a5i2"; depends=[gdata]; }; @@ -11248,6 +11477,7 @@ in with self; { phantom = derive2 { name="phantom"; version="0.1.3"; sha256="0kgw65jziw5s03isq5ywmqijhkbik5i84k30hx5gbi0zzgj8y0h1"; depends=[gplots MASS NMF qusage RColorBrewer Rcpp RcppArmadillo]; }; phase1PRMD = derive2 { name="phase1PRMD"; version="1.0.1"; sha256="1gg11rvs5zqza66f7r7sw7g3w8nzi3il1883wpwzqhp58hsphjdw"; depends=[arrayhelpers coda dplyr ggplot2 gridExtra kableExtra knitr MASS phase1RMD plyr RColorBrewer reshape2 rjags]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; + phaseR = derive2 { name="phaseR"; version="2.1.3"; sha256="1xqh6k8zl0jc2srklb8vg57f88kssm80b286asg2cawanj06qs2k"; depends=[deSolve]; }; phateR = derive2 { name="phateR"; version="0.4.1"; sha256="13vqrxbshk62wk4myhwyp4a7k6i9synknvmfah3l1pg2b3b3dqmj"; depends=[ggplot2 Matrix reticulate]; }; phd = derive2 { name="phd"; version="0.1"; sha256="1scwan3pkhdl0nyhpjrkcal1f58x0jkdkhixdcxppr1363r1v22a"; depends=[glmnet]; }; pheatmap = derive2 { name="pheatmap"; version="1.0.12"; sha256="1hdh74az3vyzz6dqa311rhxdm74n46lyr03p862kn80p0kp9d7ap"; depends=[gtable RColorBrewer scales]; }; @@ -11284,19 +11514,19 @@ in with self; { photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.3"; sha256="04nc3yhd97k2pb1jv2bgda8mii4y4ph1884wagw8y3lc0g4dkicv"; depends=[photobiology]; }; photosynthesis = derive2 { name="photosynthesis"; version="1.0.0"; sha256="089b42s4277j6pmxa3jsg0bcrilqanp7dblnz6hlmgprqcbmlhwb"; depends=[crayon dplyr furrr future glue gunit magrittr purrr rlang stringr tealeaves tidyr tidyselect units]; }; phrasemachine = derive2 { name="phrasemachine"; version="1.1.2"; sha256="1145c8ymarhbza8253rw4ybnq0k5pcckqxpdcr8s2y23pj182r1p"; depends=[NLP openNLP stringr]; }; - phreeqc = derive2 { name="phreeqc"; version="3.4.10"; sha256="1gmi81dical39ph1yf7n0pkhgbaf7p5xhv2cg3n15j1vpr8gwikl"; depends=[]; }; + phreeqc = derive2 { name="phreeqc"; version="3.6.0"; sha256="17dv4c94y7z5yaqx1g8llbmwpg15pkkixkhmi5knyyvi2fd23vkl"; depends=[]; }; phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; - phuse = derive2 { name="phuse"; version="0.1.8"; sha256="1ppinprmanpkhvf9apmjzsqc1q26m0mmgxl97iqqnrpk8cpln54d"; depends=[git2r httr jsonlite RCurl rlist shiny stringr yaml]; }; + phuse = derive2 { name="phuse"; version="0.2.0"; sha256="0zbkh7j3i87c77k9z959gq676qn3aqnsx8lvm7jg99yl9p7i5znm"; depends=[git2r httr jsonlite RCurl rlist SASxport shiny stringr yaml]; }; phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; }; - phyclust = derive2 { name="phyclust"; version="0.1-26"; sha256="1zapp8252przxlbi9knx9qvv8vc1cm3ywf65m07j9n2cdl31iqbw"; depends=[ape]; }; + phyclust = derive2 { name="phyclust"; version="0.1-27"; sha256="0pcid1vf3cb9ly0kx2a5jgdlns5chx51zkgnfj33z30h50fs2n02"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; - phylin = derive2 { name="phylin"; version="2.0"; sha256="1j7v79ga6d4ysfmsh8na4s6mgs04wi4c89l5kxvwaqvj8ic0jlpn"; depends=[]; }; + phylin = derive2 { name="phylin"; version="2.0.1"; sha256="0gmvr9zcaxb49gfjg3bq0izmw18hhganv1hnzjg257ar2xr5hbgn"; depends=[]; }; phyloTop = derive2 { name="phyloTop"; version="2.1.1"; sha256="1n44kr3a9yg8yvy3m493zi04x6aiqm424fp2ls9yzyx1cga2h9nk"; depends=[ape igraph NHPoisson phylobase]; }; phylobase = derive2 { name="phylobase"; version="0.8.6"; sha256="1n9g69llrh8xfmrnxh78rr09cxy5qbc99dr3amg121pl1qhpn4g7"; depends=[ade4 ape Rcpp rncl RNeXML]; }; phylocanvas = derive2 { name="phylocanvas"; version="0.1.3"; sha256="1l5br500lwwf7vp8wph5ykpkpqd15lypvhzy0c1cc8g8c6f7pckn"; depends=[ape htmlwidgets phylobase]; }; phyloclim = derive2 { name="phyloclim"; version="0.9.5"; sha256="107kilh0gwr84ig54g92zyk7zv553pky2bzpjqgf9fjwbm6fvmrs"; depends=[ape raster sp]; }; - phylocomr = derive2 { name="phylocomr"; version="0.1.4"; sha256="1jaznba7mmizkx7xipxr9l89j6cmpq7rrsg9jjl4wi8sdv2s7fcc"; depends=[sys tibble]; }; + phylocomr = derive2 { name="phylocomr"; version="0.3.0"; sha256="0w02r7nwnal22gqrs53fbmhbzs10237yghhmm20fh6va0cfh1j36"; depends=[sys tibble]; }; phylocurve = derive2 { name="phylocurve"; version="2.0.9"; sha256="1d01nwfpyh61r00dq6cnhxdwzk81jr3l6aa51dl1wck4cy0frscp"; depends=[ape doParallel drc dtw foreach geiger geomorph GPfit Matrix mvnmle phylolm phytools Rcpp RcppArmadillo rgl]; }; phylogram = derive2 { name="phylogram"; version="2.1.0"; sha256="1p4h5pirc0m5pzc18q0jk3mcmb5n48gdf9abz03vml3a209xxl2v"; depends=[ape]; }; phyloland = derive2 { name="phyloland"; version="1.3"; sha256="10g40m6n2s4qvnzlqcwpy3k0j7bxdp79f586jj910b8p00ymrksp"; depends=[ape]; }; @@ -11305,10 +11535,11 @@ in with self; { phylopath = derive2 { name="phylopath"; version="1.1.1"; sha256="02wx4hav2p81hpzyd2k589h7d56ziki7gmk16bi28c6z49pn2cfx"; depends=[ape ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble]; }; phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.0.2"; sha256="1xgv2kf7j3ia5vk10r7w9588rfv7asdaf8f3yxwp5q7aqn3krm6q"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; phylosignal = derive2 { name="phylosignal"; version="1.2.1"; sha256="10ds4vn5rw3nrgvsg2n0b53bivy54p5j7fmnqn81alzz9irgrkcs"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; - phylosim = derive2 { name="phylosim"; version="3.0.4"; sha256="08ajpb3gjglgx2s4jqbpgpcm01hz4p9c3wacfmq0wl1l7sjgsnrs"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; + phylosim = derive2 { name="phylosim"; version="3.0.5"; sha256="07adqgkxng0jj51nhwlsxxnd0bdxrk54lvj1fs53yxy236q6xwkf"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; phylotaR = derive2 { name="phylotaR"; version="1.0.0"; sha256="0plxc3l9fxxj9mfnhnpp5wrxyvxm292fxrwx2g8xysasmjb301v9"; depends=[ggplot2 igraph R_utils rentrez sys treeman treemapify XML]; }; phylotate = derive2 { name="phylotate"; version="1.3"; sha256="092kvn32j06vm8ilwjkgidcz11r3qhsmi0cb0g0nnykw0a0vii4p"; depends=[]; }; phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; }; + phyr = derive2 { name="phyr"; version="1.0.2"; sha256="1qk4mbchi5dcz6vsmwb93gj5ihp2ygvm1ya63mkw11vkyy2nv67c"; depends=[ape dplyr gridExtra latticeExtra lme4 Matrix mvtnorm nloptr Rcpp RcppArmadillo]; }; phyreg = derive2 { name="phyreg"; version="1.0.2"; sha256="0m1psq79zl7h8791pl8g6i0ybda7vgddza8r9mwqhg4sw1q4bzcp"; depends=[]; }; physiology = derive2 { name="physiology"; version="1.2.1"; sha256="1z7xymwgj7bqn0yvcz3q8pvwhpr5vx5qd0x8sayal1vgpqc0nccb"; depends=[Rcpp]; }; phytools = derive2 { name="phytools"; version="0.6-99"; sha256="03rrcx2r8sbf6510xdd0259p02apy2z84ifk7f076pvwlz5k5x9f"; depends=[animation ape clusterGeneration coda combinat expm gtools maps MASS mnormt nlme numDeriv phangorn plotrix scatterplot3d]; }; @@ -11316,7 +11547,7 @@ in with self; { picante = derive2 { name="picante"; version="1.8"; sha256="1bcq2j7fs89c2jib68qq6la67rxyg9raryf162mwvjakpf6k19l1"; depends=[ape nlme vegan]; }; picasso = derive2 { name="picasso"; version="1.3.1"; sha256="1z7zm88wjp7fia7054l7i55f152iddrjj9wbcpcskhc8s6kfg53c"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.50"; sha256="05s3xqf95d4avh7gkr49jsm8jzacbv694c3wgppkkc40zip6vkc7"; depends=[DoE_base FrF2 FrF2_catlg128 ggplot2 png]; }; - piecepackr = derive2 { name="piecepackr"; version="1.0.2"; sha256="108nq35xgbwzhab900pn2dqdqhxycqiigf5cvliswpxx0zddp0n7"; depends=[grImport2 purrr R6 stringr tibble]; }; + piecepackr = derive2 { name="piecepackr"; version="1.1.1"; sha256="1s5qkawjsqv0nz1ixk87nlr6sg1jxc3jf8sxfphl4bgvhkyx0f5j"; depends=[grImport2 purrr R6 stringr tibble]; }; piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.0.2"; sha256="07vz90cghkbmcar9ps94wydvg4r7mj32pa7vjdmgm5j8dhxq8max"; depends=[car lme4 MASS nlme pbkrtest]; }; pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; }; piggyback = derive2 { name="piggyback"; version="0.0.10"; sha256="08d7jxw7mvfyhjbr8zy95p952j2p94ii6zq38b8xw96g6k1380bz"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; @@ -11326,12 +11557,12 @@ in with self; { pinbasic = derive2 { name="pinbasic"; version="1.2.2"; sha256="0mcw68wrixz2jf62nfifdgg8bnp4h1p3byivz28wi61blj8iaa75"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; pingers = derive2 { name="pingers"; version="0.1.1"; sha256="09np6aph6rhvdh6mwky8a57i38bi2amwi7x91p9kfb2mzkql8k8w"; depends=[data_table dplyr lubridate plotly reshape2 stringr tibble tictoc tidyselect]; }; - pingr = derive2 { name="pingr"; version="1.1.2"; sha256="17fh2gjlmwy6wy8i24q76fivjig8jm05g9kvfz81q0h6b5zxnpmg"; depends=[]; }; + pingr = derive2 { name="pingr"; version="2.0.0"; sha256="0fyzm8hlksqyzp1mrb5b10qprnqd9jhk8lsdyb4j4h4ap94wwzb7"; depends=[processx]; }; pinnacle_API = derive2 { name="pinnacle.API"; version="2.3.3"; sha256="1b6adns1xr3cgcj2mdjvl16cm2vjjgsj2l8m2c47plyc5jh05qmb"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; }; pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; }; pinochet = derive2 { name="pinochet"; version="0.1.0"; sha256="0qy18mlw34cv9p7b3qb5bidxyq44k0hzj91hm5vp6wkjhik4knvi"; depends=[]; }; pinp = derive2 { name="pinp"; version="0.0.9"; sha256="1hdj0mqwz0hwl6jsh5zknbgg10bj49giqnr4y3lavfbk8d7qmmvs"; depends=[knitr rmarkdown]; }; - pins = derive2 { name="pins"; version="0.2.0"; sha256="07mjrpfd4mvczlfg4dhradacirlrf8lq9mhrfjf71v2vlhzv54da"; depends=[base64enc httr jsonlite magrittr openssl rappdirs withr yaml zip]; }; + pins = derive2 { name="pins"; version="0.3.0"; sha256="17hzp8rcif85bc4svazwhyv434aqilzm7ir019l8y7bwhsfnbilw"; depends=[base64enc crayon httr jsonlite magrittr mime openssl rappdirs withr yaml zip]; }; pinyin = derive2 { name="pinyin"; version="1.1.6"; sha256="0rw9qd5hbcmpi30vdqs31ijy37d8jlpqv0xif2nndb8cwj8x5bw2"; depends=[data_table splitstackshape]; }; pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; }; pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; }; @@ -11344,21 +11575,22 @@ in with self; { piton = derive2 { name="piton"; version="0.1.1"; sha256="1265y4lv2m5nwrh25sahjkxwmivpxgh9shrdidlmaman7zs6cclr"; depends=[Rcpp]; }; pivmet = derive2 { name="pivmet"; version="0.2.0"; sha256="0xcm0pb5qn2vikhnf7fnp6942syq0xax7fgwmspixa6la5bdkksg"; depends=[bayesmix cluster corpcor MASS mclust mvtnorm RcmdrMisc rjags rstan runjags]; }; pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; }; - pivottabler = derive2 { name="pivottabler"; version="1.2.2"; sha256="1j74jd48xh2x3jzgi5v45g4lg8xp7fwqw0pkhx1c0dhdp4d1wf02"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; + pivottabler = derive2 { name="pivottabler"; version="1.2.3"; sha256="08aapjisah7q0lyw70cfiqkyic633z8cfiq760nnngh88cp1hkc7"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; pixels = derive2 { name="pixels"; version="0.1.0"; sha256="0lna0z2shs49kh48ipjnyigaa22wb9gm4mq970ldhh9msb7wcv55"; depends=[htmlwidgets miniUI shiny]; }; pixiedust = derive2 { name="pixiedust"; version="0.8.6"; sha256="1dajiblpm51szndz026lmwh6swx8f9f03s6md26d84awcx0q1dpc"; depends=[broom checkmate dplyr htmltools knitr labelVector magrittr scales tidyr]; }; pixmap = derive2 { name="pixmap"; version="0.4-11"; sha256="04klxp6jndw1bp6z40v20fbmdmdpfca2g0czmmmgbkark9s1183g"; depends=[]; }; - pkgKitten = derive2 { name="pkgKitten"; version="0.1.4"; sha256="0c44zrvpyz87s5mjhsqdrkyrvyzhyldnq371bwnn9crbpbac3wnd"; depends=[]; }; - pkgbuild = derive2 { name="pkgbuild"; version="1.0.5"; sha256="0y4i85axwajrk67h3w6fiqfm6wxmhn3dr240w5l2nvqg3ahpxc8q"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; + pkgKitten = derive2 { name="pkgKitten"; version="0.1.5"; sha256="0nnib0gv9g22b9p01xigsgj04jv29fv7f444invfphfh9cc866m4"; depends=[]; }; + pkgbuild = derive2 { name="pkgbuild"; version="1.0.6"; sha256="0xnlz6ivhkbmncg9hfw5p69lm4rjy3wn5lyxmygxyf4rrfnnqwxx"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; pkgcache = derive2 { name="pkgcache"; version="1.0.5"; sha256="0d0w3gqw3429dwmfc9804f9pl71l14phh03ppk2q5q1kyp49xw92"; depends=[assertthat cli cliapp crayon curl digest filelock glue prettyunits R6 rappdirs rematch2 rlang tibble uuid withr]; }; pkgcond = derive2 { name="pkgcond"; version="0.1.0"; sha256="0pxj798042g23cf19r67nbgdyhpd868n2pkqjvjgrgr8ivwnkf1h"; depends=[]; }; pkgconfig = derive2 { name="pkgconfig"; version="2.0.3"; sha256="0l1qph8zyi2sic3k2qcd7vlfl7rzfh1q7z7zvjkl5f7y1x2fy3rk"; depends=[]; }; pkgdown = derive2 { name="pkgdown"; version="1.4.1"; sha256="1y0mnsiq05snzschh2y5a0y1wrwh79c4jclsljjyflibbffhxxcf"; depends=[callr cli crayon desc digest evaluate fansi fs highlight httr magrittr MASS memoise openssl processx purrr rematch2 rlang rmarkdown rstudioapi tibble whisker withr xml2 yaml]; }; + pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.2"; sha256="07x63w19fg7sl547501r2dx2ds5sfdfb29xvqrvjibf8265x25fw"; depends=[downloader rappdirs]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.3"; sha256="1isiywgm20rypc5qr03p0k7lis76zzd96x5ncbvia644d2n13brm"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; pkgload = derive2 { name="pkgload"; version="1.0.2"; sha256="0z7jvharafahi2gv5547mk1n499isjzw06kfwymmxc0gd575d1ii"; depends=[desc pkgbuild rlang rprojroot rstudioapi withr]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.27"; sha256="0spcamjncj78kzjps2rw4v1a4494yazv6xvhn0vmdflnypc8k8hp"; depends=[bibtex codetools digest magrittr registry stringi stringr withr xtable]; }; pkgnet = derive2 { name="pkgnet"; version="0.4.0"; sha256="0da139p57xvy2v5ld3mnddgak59zjr58ndnbgg3y8msni80g52gq"; depends=[assertthat covr data_table DT futile_logger glue igraph knitr magrittr R6 rlang rmarkdown visNetwork]; }; - pkgsearch = derive2 { name="pkgsearch"; version="2.0.1"; sha256="00wi4lym0zjb29qdalgwlbcdxi4k39pxxm6a2qhllfcbgc099mlb"; depends=[httr jsonlite magrittr parsedate prettyunits]; }; + pkgsearch = derive2 { name="pkgsearch"; version="3.0.1"; sha256="0gkc8dnsfp6df8y1s09m52faz069vsv7kgpkjw1w2fw93nl1354f"; depends=[assertthat httr jsonlite parsedate prettyunits tibble]; }; pkgverse = derive2 { name="pkgverse"; version="0.0.1"; sha256="0lsv7s9vsjvfpy19nxbdlbm363j01wwqqnrp0nlrik590hfq4w83"; depends=[devtools usethis]; }; pkmon = derive2 { name="pkmon"; version="1.0"; sha256="0j2v4zlf7vgy5gld29xiii15m9i85cpiwc25rmzjm02cz2p32c72"; depends=[]; }; pkr = derive2 { name="pkr"; version="0.1.2"; sha256="0m045dlcq3rls1w0smy4jvk3c57ckpqdv8xnz261k1gnnyjmz1k2"; depends=[binr foreign forestplot rtf]; }; @@ -11384,9 +11616,8 @@ in with self; { plfMA = derive2 { name="plfMA"; version="1.0.4"; sha256="0q6wiiknmgw812kcf9qq309zlizyry7ldn6m08lkw6xq6i4f4s85"; depends=[cairoDevice gWidgets gWidgetsRGtk2 limma RGtk2]; }; plfm = derive2 { name="plfm"; version="2.2.2"; sha256="1jgf3jrkdpsf77i4lf68s6sxax95c9is4nryhnzanq9i5f23j24v"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; - pliable = derive2 { name="pliable"; version="1.1"; sha256="0z1hm4k0q3dgwgd1dy6wl0ydsqzygmn85m6yimffzqvnlmrq3vjg"; depends=[class glmnet]; }; plink = derive2 { name="plink"; version="1.5-1"; sha256="0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0"; depends=[lattice MASS statmod]; }; - plinkQC = derive2 { name="plinkQC"; version="0.2.3"; sha256="1xjwa5zc69m4p9x4vx0fi5xi8zhwv1a5b4l3b1z3l3vw800ngjjq"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; + plinkQC = derive2 { name="plinkQC"; version="0.3.0"; sha256="1s458cg4y1zisjk3var3fnm1q54hfbl228i9qdxgzkkrhzc9mghw"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; plm = derive2 { name="plm"; version="2.2-0"; sha256="0sn8a3f5xaa1c98br454c6h5jfba7s3jscl61km1gm47qcr8a0vz"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-1"; sha256="09zg7zwmmqpjr1j59lqsjf4blrkya9wfwddgzfm9rr5jxrzvqcv8"; depends=[]; }; @@ -11397,18 +11628,18 @@ in with self; { plot3logit = derive2 { name="plot3logit"; version="1.0.2"; sha256="0pgqlq8rpkrv277d1mfy2z22mkykc5zmhvkg07wsz3hdxr0ifx80"; depends=[ellipse ggplot2 ggtern magrittr reshape2 Ternary]; }; plotGMM = derive2 { name="plotGMM"; version="0.2.1"; sha256="1gp99gvb886kcwjk9yvfd7s6mgy3jf3x0zhpaj9zp0fky12ivz7b"; depends=[amerika ggplot2 wesanderson]; }; plotGoogleMaps = derive2 { name="plotGoogleMaps"; version="2.2"; sha256="0qv57k46ncg0wrgma0sbr3xf0j9j8cii3ppk3gs65ardghs3bf6b"; depends=[lattice maptools raster rgdal sp spacetime]; }; - plotKML = derive2 { name="plotKML"; version="0.5-9"; sha256="08pbpa3j4m4vngl902z7hr1p7yjimhxmajx7lw45p226x654x6xr"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; + plotKML = derive2 { name="plotKML"; version="0.6-0"; sha256="18c2lwdlxbzlfhlf0bip825v2mfrnqd9gg30l967zv112j7x0hrf"; depends=[aqp classInt colorRamps colorspace dismo gstat pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sp spacetime stringr XML zoo]; }; plotMCMC = derive2 { name="plotMCMC"; version="2.0-0"; sha256="0i4kcx6cpqjd6i16w3i8s34siw44qigca2jbk98b9ligbi65qnqb"; depends=[coda gplots lattice]; }; plotMElm = derive2 { name="plotMElm"; version="0.1.5"; sha256="0wwqzrpkmq9gzazdzlk62qig6vz43niada6fxh1wcsjqjwkcccgp"; depends=[ggplot2 interactionTest]; }; plotROC = derive2 { name="plotROC"; version="2.2.1"; sha256="0bk8j2lp80zcz4kkig1y5a1ig8vbjh7b4inzc46bn07ns1rdjgzg"; depends=[ggplot2 gridSVG plyr rlang shiny]; }; plotSEMM = derive2 { name="plotSEMM"; version="2.4"; sha256="0fircrayhz92zvkigkyb1zpn07bvssqs1ip15p926zj3rl77fqgy"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; - plotdap = derive2 { name="plotdap"; version="0.0.3"; sha256="0ymgbg24k1v853jfd621swhh4g8i77sywbxjzm7pjqcg7wrb1z44"; depends=[dplyr gganimate ggplot2 lazyeval lubridate magrittr maps maptools raster rerddap rgdal rgeos scales sf tidyr]; }; + plotdap = derive2 { name="plotdap"; version="0.0.4"; sha256="1lal5vqy7s9g5wj39d5d5kw8lzpl9gvq0p2wig8s1w3m7cb2ignx"; depends=[dplyr gganimate ggplot2 lazyeval lubridate magrittr maps raster rerddap rgeos scales sf tidyr]; }; plotfunctions = derive2 { name="plotfunctions"; version="1.3"; sha256="0cnmwkfjg45187j490sf01gxijhajrpi6j13hfckli2ysn6xrgz3"; depends=[]; }; - plothelper = derive2 { name="plothelper"; version="0.1.4"; sha256="0qmzbks70rjhkih0g2xvwd4zsfykxh0i18l61phz77zz71w4nbr1"; depends=[ggfittext ggplot2 gridExtra magick plyr scales]; }; + plothelper = derive2 { name="plothelper"; version="0.1.5"; sha256="1bvk45cfajcjwr4b4ajw33xk5p9hwqw833n05vxhhgrwnmsla2ag"; depends=[ggfittext ggplot2 gridExtra magick plyr scales]; }; plotluck = derive2 { name="plotluck"; version="1.1.1"; sha256="16wqj4xfa8b7kal6v8mp2zlhwf9l3y6y5n44qbpvy652gzb2rw2z"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; - plotly = derive2 { name="plotly"; version="4.9.0"; sha256="1kz2hm7vnkn4clxr6yyxxnmdmkz9zwjq6bzysw7j27r3721i8qgp"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; + plotly = derive2 { name="plotly"; version="4.9.1"; sha256="0gadam4qw81q9gpjp7sqrpd7ikmcdsc78d8vjn39g0xzs5j8r845"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; plotlyGeoAssets = derive2 { name="plotlyGeoAssets"; version="0.0.2"; sha256="1c6i4dz5qmym1pcddgffcqgb76jz84252xldprg2caylrqvzv6b7"; depends=[]; }; - plotmo = derive2 { name="plotmo"; version="3.5.5"; sha256="0wdpdik6kn21pf3fmb0qxm9pwsh3l59wgsd8a1789mfvi2a7f37f"; depends=[Formula plotrix TeachingDemos]; }; + plotmo = derive2 { name="plotmo"; version="3.5.6"; sha256="15555b7y62sc0z3r41gb56fmc6rmj1icnanyibx22v8kjz48vw3q"; depends=[Formula plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; plotrix = derive2 { name="plotrix"; version="3.7-6"; sha256="0ijfjlr7ls5hvfyzdmwab6bx0w3nvp0c8fgynj4355cj8mbzgmc3"; depends=[]; }; @@ -11423,7 +11654,7 @@ in with self; { plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; plsdof = derive2 { name="plsdof"; version="0.2-9"; sha256="1g41nbycgzjwrackbdf08q1phqpyy6zihm5ak2728683vd88fxzv"; depends=[MASS]; }; plsgenomics = derive2 { name="plsgenomics"; version="1.5-2"; sha256="1pvb50nv6jc99bm2hsxpzazg26y49yi24wwwim5xcjj6j1szbip4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; - plsmselect = derive2 { name="plsmselect"; version="0.1.3"; sha256="0j5g0hlm2zk02ygp0692b3721xdhdy7lf8pmwbfq5dkrxq805jhj"; depends=[dplyr glmnet mgcv survival]; }; + plsmselect = derive2 { name="plsmselect"; version="0.2.0"; sha256="044mwdqv5vw0apmx3yhn6xkdmw6baalvb8c6hhmawcs279kwi1m9"; depends=[dplyr glmnet mgcv survival]; }; plspm = derive2 { name="plspm"; version="0.4.9"; sha256="03aj1ffq11hh931dbkxy9ba74xyvzmr1ylrj4fw1rbryrwqg89v6"; depends=[amap diagram shape tester turner]; }; plspm_formula = derive2 { name="plspm.formula"; version="1.0.1"; sha256="1i2d1q8pz21js1ci8afnqzcky430hh1iwf5f6jr3j9yr9gs365k5"; depends=[plspm]; }; plsr = derive2 { name="plsr"; version="0.0.1"; sha256="0l413m49zjpb35v0zw8dlxn53nh7fghinbmwfmldl3jgdvay2s7x"; depends=[boot ggplot2 reshape2 shiny]; }; @@ -11444,11 +11675,11 @@ in with self; { pmhtutorial = derive2 { name="pmhtutorial"; version="1.5"; sha256="1hcw8hwpsivbhz86lnzy08q9n8vahnq8f7rmi4xkmg6b44582cqx"; depends=[mvtnorm Quandl]; }; pmml = derive2 { name="pmml"; version="2.1.0"; sha256="0vcfwc4gwc2cgf1v2008wf3mkbw77vq5dqziw13ivir49qnzjf2g"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.3"; sha256="0315kb5x04pidpzr04yaxyynp0mz4ilzp7vkspq4agjkds5hyc88"; depends=[]; }; - pmpp = derive2 { name="pmpp"; version="0.1.0"; sha256="1vmv7aav0rvp7kd5f16ym422ygw1wpnwrhmmp2w1c2fl8i263zh9"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; + pmpp = derive2 { name="pmpp"; version="0.1.1"; sha256="1srmkih6zsyf8yf1f045xy1afcz0if6nf1ncslgrq6rgm7330lkw"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; - pmsampsize = derive2 { name="pmsampsize"; version="1.0.1"; sha256="1463pw28f09f9yvn4lhlsiz1cv017i693i73rvlq94qb3fzar5yw"; depends=[]; }; + pmsampsize = derive2 { name="pmsampsize"; version="1.0.2"; sha256="1jb6vpbc3p7xpskjs7cfkird096fl1faczmp3nfawf7pnvf679jg"; depends=[]; }; pmultinom = derive2 { name="pmultinom"; version="1.0.0"; sha256="0p2amb3y4jl24r21fii1qpmdbn5pfgywrx8k7x1jxpg49rk7k0rp"; depends=[fftw]; }; - pmxTools = derive2 { name="pmxTools"; version="0.1.1"; sha256="0ryvbrk0f5x6b8rx479ifhk651wzg32zb4kn75dbjgh9q2qnsqhl"; depends=[GGally ggplot2 magrittr MASS PKNCA plyr stringr XML]; }; + pmxTools = derive2 { name="pmxTools"; version="0.1.3"; sha256="0v1q83hgql2qpkc199m1sf0kwmacda3i06lbs4ws02had3r4nv8s"; depends=[ggplot2 ggrepel gridExtra MASS stringr XML]; }; png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; }; pnmtrem = derive2 { name="pnmtrem"; version="1.3"; sha256="0053gg368sdpcw2qzydpq0c5v2cxdlwgf5k68cbw0yx41csjgvz0"; depends=[MASS]; }; pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; }; @@ -11473,13 +11704,14 @@ in with self; { poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; }; polidata = derive2 { name="polidata"; version="0.1.0.1"; sha256="0mfjcjhv2prc2xdg9672z1cjxd2wp541hb7lz497cqlig2p6qgb4"; depends=[jsonlite RCurl]; }; poliscidata = derive2 { name="poliscidata"; version="2.2.3"; sha256="18mmdzf9hrfz36rh1rg1j5q1m131xadppy272y4f4yay0ljafbm2"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; - politeness = derive2 { name="politeness"; version="0.3.3"; sha256="1v9xm67lgn3bj4cf9x996ymb21l7l15jfarikbs1zf1vxb7qpq21"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; + polite = derive2 { name="polite"; version="0.1.1"; sha256="15hiifaf63hx0xn453lr0xhdnxqifrgyrgrymp0a9k3j7qja59jk"; depends=[here httr magrittr memoise ratelimitr robotstxt rvest usethis]; }; + politeness = derive2 { name="politeness"; version="0.4.1"; sha256="0jb5s62qbf5904j0990iv4z1zlqmyvci4dbahkd2lzxsz51ykdq3"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; politicaldata = derive2 { name="politicaldata"; version="0.1.3"; sha256="1n25k53mmlmmg9p9a36jh4z6xhl1yyv9v1c56mav873105h359wi"; depends=[]; }; pollen = derive2 { name="pollen"; version="0.71.0"; sha256="0g0g6n8y87jyk7l4s6xpdk60dz4lkg2xp5c5agakkrah8a233920"; depends=[dplyr lubridate purrr]; }; pollimetry = derive2 { name="pollimetry"; version="1.0.1"; sha256="09zmcwlgzl4fnkdg2m424ibv3izzrm595c7pi4mc3bd1g8sa2ypn"; depends=[brms repmis]; }; pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; polmineR = derive2 { name="polmineR"; version="0.7.11"; sha256="0vifxnvzh2nvrykpx8y9waps1aqzplvjpxxcfy2z31lyfca646kz"; depends=[data_table DT jsonlite knitr Matrix pbapply R6 RcppCWB slam stringi tm xml2]; }; - polspline = derive2 { name="polspline"; version="1.1.15"; sha256="19zs4kpagsrzhng1byjbz1c4jxnfk58h4rgr096ml1bjwrgamnwc"; depends=[]; }; + polspline = derive2 { name="polspline"; version="1.1.17"; sha256="0c7fnxpqpy3hibiim4yib6l6bq363s97wwvllxp4lp8h06fjcyyn"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.7.1"; sha256="0ln1n5w64vgq63gm4mm9wzl9lbp7ppgaxg0ba0yw0xsr5cmkyp37"; depends=[sp]; }; polyPK = derive2 { name="polyPK"; version="3.1.0"; sha256="0cb83sq8iz4swr73vwhh8n4k62p6321nsy1sz5fba0wiicycxf55"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls sqldf xlsx]; }; polyRAD = derive2 { name="polyRAD"; version="1.1"; sha256="04rhff7yzswilx67ak56vsr4sxfjzhd3d9fihnx2mnyddf1mhamq"; depends=[fastmatch pcaMethods Rcpp]; }; @@ -11500,19 +11732,18 @@ in with self; { polywog = derive2 { name="polywog"; version="0.4-1"; sha256="02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; pomdp = derive2 { name="pomdp"; version="0.9.1-1"; sha256="16vbriv5ssb75qcp6c6gaz796wryf5b4d09vc9i3dd37gdf09d4s"; depends=[igraph]; }; - pomp = derive2 { name="pomp"; version="2.3"; sha256="0zkb6h2i34p2y4vhhrfwhqcdw0jqps7yafgry7wlpczdfjjdnqh2"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; + pomp = derive2 { name="pomp"; version="2.4"; sha256="19j8aqsxx54xacw6vd3yva8jznqrycc831zs5f08x9r2q1ld6yjp"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; pompom = derive2 { name="pompom"; version="0.2.0"; sha256="1alz3lrj7m16vhymsvvrcmf0kmgx88q2f3v4j6wiciqv77bnyai1"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.4.3"; sha256="065pbvhgvvgv00df4kj4zn7mlbrv2iqa1583k0hlgavn15gfm6d2"; depends=[DBI dbplyr dplyr later R6]; }; poolVIM = derive2 { name="poolVIM"; version="1.0.0"; sha256="19yw6pp5l3jmla4wjbvpjq132f645yks49pzsdv123f3qfr8f0m6"; depends=[EmpiricalBrownsMethod Hmisc ranger]; }; - poolfstat = derive2 { name="poolfstat"; version="1.1.0"; sha256="126rlvjnssh7s0r637in75wzjyv9f1pb35ivfinib5paw2nx1sy5"; depends=[doParallel foreach]; }; + poolfstat = derive2 { name="poolfstat"; version="1.1.1"; sha256="12iwhfj1a87mbis7whgp4z3qg97xkj90rw8b9jsqnfmzhz6fn0yp"; depends=[doParallel foreach]; }; pooling = derive2 { name="pooling"; version="1.1.1"; sha256="0011w80pxz01scj2sa69m1bcfq797hq3ihpw46fdlxsxavz8prwy"; depends=[cubature dplyr dvmisc ggplot2 ggrepel mvtnorm pracma]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; pop_wolf = derive2 { name="pop.wolf"; version="0.1"; sha256="19n00xv47v9j7slvm2ykzlksjfwjzimf88b3nk0y0192c29sdc9x"; depends=[abind]; }; popEpi = derive2 { name="popEpi"; version="0.4.8"; sha256="1gc7kyik0209pc8mvl6c69lzb3dnkif0mby4l4pq8zfdz73lmi06"; depends=[data_table Epi survival]; }; popKorn = derive2 { name="popKorn"; version="0.3-0"; sha256="1zcl6ms7ghbcjyjgfg35h37ma8nspg15rk2ik82yalqlzxjf7kxw"; depends=[boot]; }; - popRange = derive2 { name="popRange"; version="1.1.3"; sha256="0kkz6va0p8zv3skaqqcpw42014d9x9x4ilx0czz91qf46h61jgb0"; depends=[findpython]; }; - popReconstruct = derive2 { name="popReconstruct"; version="1.0-5"; sha256="0fvrjb3b3bahi5da0ikzv164p49zvgm43mskqd7p9dgadbg1xpi2"; depends=[coda]; }; + popReconstruct = derive2 { name="popReconstruct"; version="1.0-6"; sha256="0nmf93dy2qf7z9mafpy99ry53aapbxlismn7drn732r8gvravapx"; depends=[coda]; }; popbio = derive2 { name="popbio"; version="2.6"; sha256="1j8q4rdq8b9r56p0slwkfsknv6linjnmcprrzbck9yr99zfqp067"; depends=[]; }; popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; popkin = derive2 { name="popkin"; version="1.2.2"; sha256="1dc1p791v20zq6wxc3n45g6bqpvjvhy9pn4s5v1y6sw69myxlhj3"; depends=[RColorBrewer Rcpp RcppEigen]; }; @@ -11523,14 +11754,17 @@ in with self; { poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; population = derive2 { name="population"; version="0.2"; sha256="1k0hwh17dyfbbyw8gprsz1klx6l2ncq5mxkmnjmknlnrkpah0bbl"; depends=[abind]; }; populationPDXdesign = derive2 { name="populationPDXdesign"; version="1.0.3"; sha256="0p73ddv3j1s1vs4j3axnsf39n626qjv0w1qlq9p7km4s6729bhgv"; depends=[devtools ggplot2 plyr roxygen2 shiny shinycssloaders]; }; - portalr = derive2 { name="portalr"; version="0.2.6"; sha256="08d29xg377vrrxzdzbsivm2zvh795fwhhz8aw53gbg4xxz23ydkj"; depends=[clisymbols crayon dplyr forecast httr jsonlite lubridate lunar magrittr rlang tibble tidyr usethis]; }; + porridge = derive2 { name="porridge"; version="0.0.2"; sha256="04w31avmjhb997vdzxg5mxddjgjzbhphw4a0l2xck7x374v3qqh7"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; + portalr = derive2 { name="portalr"; version="0.2.7"; sha256="09l61ncxs0v65x43yp189yj53sl4wdrgsiiz89c4lhasjh5q64h7"; depends=[clisymbols crayon dplyr forecast httr jsonlite lubridate lunar magrittr rlang tibble tidyr usethis]; }; portes = derive2 { name="portes"; version="3.0"; sha256="144fipskh6yb6xcz3m5bgh2kwjwa58zaw24y88hzzrdvh9glvyrc"; depends=[forecast]; }; portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; portfolio_optimization = derive2 { name="portfolio.optimization"; version="1.0-0"; sha256="1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr"; depends=[magrittr MASS modopt_matlab xts]; }; - portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.0"; sha256="0y905km1kj8v2nvs88f4kl7w9bmhhs7qx9ain3mwm1i488viz65g"; depends=[digest doSNOW evaluate foreach ggplot2 PerformanceAnalytics quantmod R_utils snow xts zoo]; }; + portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.1"; sha256="15yh3vi8qdahmsy2lic77vfv9c5ssalw08lmhq6vk9dbcl04z5n1"; depends=[digest doSNOW evaluate foreach ggplot2 PerformanceAnalytics quantmod R_utils rlang snow xts zoo]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; portsort = derive2 { name="portsort"; version="0.1.0"; sha256="0swl39dn7lzwvps18bva4l64a441gkf6lbwcwrhlf93f1ardvxji"; depends=[xts zoo]; }; + postDoubleR = derive2 { name="postDoubleR"; version="1.4.12"; sha256="19z8wisi16g7a78gw16r72dkxh3x5qh888qz260ih5naq0p8vy71"; depends=[doParallel ggplot2 glmnet grf neuralnet progress]; }; postGIStools = derive2 { name="postGIStools"; version="0.2.4"; sha256="04d6iqnk7j2lgv1h5c94j6y89jk75pmv26sxa51s5iwkjq7rchym"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; + posterdown = derive2 { name="posterdown"; version="1.0"; sha256="13plrrnylw3yldm0md1gr5drccfjk9f2wwlhz6lrmb3px7w5nqs0"; depends=[pagedown rmarkdown yaml]; }; postinfectious = derive2 { name="postinfectious"; version="0.1.0"; sha256="1v327zxxiwc1cdksk6s39lkkgck5dxg169pp3jiqmm7xs35dcl6y"; depends=[]; }; postlightmercury = derive2 { name="postlightmercury"; version="1.2"; sha256="1345ckp50jplcdqp3a250c6mhapqh9322jzpxj5dyqmbg2nmgp9i"; depends=[crul jsonlite purrr rvest tibble xml2]; }; postlogic = derive2 { name="postlogic"; version="0.1.0"; sha256="1m4z92y9kjjgz5xh0x74i1sgsybm8gv36l25fbbcwlg1jazwgrwn"; depends=[]; }; @@ -11552,6 +11786,7 @@ in with self; { ppcSpatial = derive2 { name="ppcSpatial"; version="0.2.0"; sha256="1gi57zngc42wcrihg29nn7qa3gaq105ckp76qmczkldshlpd7x4r"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; ppcc = derive2 { name="ppcc"; version="1.1"; sha256="0c22nkp6c6rl2d6c868pnrda1l6h9bxssmdbca3pdc5s8wjxi0nd"; depends=[]; }; ppclust = derive2 { name="ppclust"; version="0.1.3"; sha256="1480fcjzz1vfmz3sgcdrpfilqklmb1f0h4vna6xkfib5xh624lxb"; depends=[inaparc MASS]; }; + ppcong = derive2 { name="ppcong"; version="0.0.1"; sha256="1maf9lyb24v3q48x1zn9i25lqdsjpwl0hzsq8spljdzvjiyl84rb"; depends=[curl jsonlite tfse tibble]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; ppgmmga = derive2 { name="ppgmmga"; version="1.2"; sha256="1dq0p3xna5r1kiyhiziz3wc78dfqh362qhna5hmkjzhljawr9jg0"; depends=[cli crayon GA ggplot2 ggthemes mclust Rcpp RcppArmadillo]; }; ppitables = derive2 { name="ppitables"; version="0.5.1"; sha256="1gc0hh2g1wmqk49cmswq9drxw8h94xpriibs76n287nmvrg6ip7d"; depends=[tibble tidyr]; }; @@ -11572,10 +11807,11 @@ in with self; { prcbench = derive2 { name="prcbench"; version="0.8"; sha256="0bidf7268c130xj4c2pxljgkrppvjg8bmivj9zq0cm9nwhm0fdf5"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; prcr = derive2 { name="prcr"; version="0.1.5"; sha256="1hfr0jijnj5nd25rh16i81bsz8kwz0q9vmn7bqgy467cwvypg9k2"; depends=[class dplyr ggplot2 irr lpSolve purrr tibble tidyr]; }; - pre = derive2 { name="pre"; version="0.7.1"; sha256="1saz7by3r0vj97bm6jdyyyaf1041dvcs8kbj12ir6xsx6iv355s7"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; + pre = derive2 { name="pre"; version="0.7.2"; sha256="156wgyv88a5qvdksfhyyim2h1igaba8gf4mgaq6ii6sxppmik4a8"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; preText = derive2 { name="preText"; version="0.6.2"; sha256="0pcnqssv542cfajzrqfsbq0jf628nnmcb3nryvd7d5wk4wdkji4q"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; precrec = derive2 { name="precrec"; version="0.10.1"; sha256="008vcnbg0rl9x70ly1xzz1xn4fs7mjhnp2c0a7jxzwiri5gymh09"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; + predhy = derive2 { name="predhy"; version="0.1.0"; sha256="1m4ysryh66blqnvnskfwmjbz85pziqlii12jv9gpf2a3jnl5dvij"; depends=[]; }; predict3d = derive2 { name="predict3d"; version="0.1.3.3"; sha256="1kb3jacpgzln1ddnkfzhvfpzzf9wig60lppca6iy0fvq5cm8ddr4"; depends=[dplyr ggiraphExtra ggplot2 magrittr modelr moonBook plyr prediction purrr reshape2 rgl rlang stringr TH_data tidyr]; }; prediction = derive2 { name="prediction"; version="0.3.14"; sha256="0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; @@ -11596,12 +11832,14 @@ in with self; { preputils = derive2 { name="preputils"; version="1.0.2"; sha256="0cww3x7375ck56cm14ssalvpgvsdi4myr3p19zy4fcjy6fgyyxc5"; depends=[data_table]; }; prereg = derive2 { name="prereg"; version="0.4.0"; sha256="1jhlgp7ajq6mx7gn4kf3b7wqzs3v0678pa1r6p4mgvvynic8rnqj"; depends=[rmarkdown]; }; presens = derive2 { name="presens"; version="2.1.0"; sha256="175nr9pqn3m6kh9bcc1gxqmqv05xdsqdw9lx385lmm1g947d2159"; depends=[marelac measurements]; }; + presentes = derive2 { name="presentes"; version="0.1.0"; sha256="0d6zhishc7wxcvvglgw44pc6c172qpxb8i4iw3lqbmji7ash5zpx"; depends=[]; }; preseqR = derive2 { name="preseqR"; version="4.0.0"; sha256="1g2rnnmi45649vpy6z45v5i3wxm54s138ajqrzwi3a5r7x3xnhq1"; depends=[polynom]; }; + presmTP = derive2 { name="presmTP"; version="1.1.0"; sha256="134p58zzk8i0whscvl5qdfn4niksypyxavq1m15cvw4zzk4dk6fw"; depends=[mgcv survPresmooth]; }; prettyB = derive2 { name="prettyB"; version="0.2.1"; sha256="1qpqr490bpvmj1ybjbh4lhiznqa0n3chn09m7bhn9wfm3ic56s0p"; depends=[]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.6"; sha256="0yjpwxdy9mkj2k33zvd5klyv4ava46i19yls87n0bvf79y90ikpy"; depends=[]; }; prettyR = derive2 { name="prettyR"; version="2.2-3"; sha256="1rs90cmr5dyry724php90mp41qwzzk1z3gxfwcj1k157qawacyhr"; depends=[]; }; prettycode = derive2 { name="prettycode"; version="1.0.2"; sha256="0yz75qqpvrk4p9mypjnmrg1xwlrhh2iax2897f11cfk8rjj784jg"; depends=[crayon withr]; }; - prettydoc = derive2 { name="prettydoc"; version="0.3.0"; sha256="1bjgcr9kxyzm8q5hilc6kfjy32rwy10cdfajb90w8drc91g0g9n9"; depends=[rmarkdown]; }; + prettydoc = derive2 { name="prettydoc"; version="0.3.1"; sha256="02x4vf7rr4gazz6mmygynqnjs016jhjb2gg109sqrs0nwk1blcm9"; depends=[rmarkdown]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; }; prevR = derive2 { name="prevR"; version="3.4.0"; sha256="1y61ggqjf3b2a5f9zprbp9ylfkcfk0jiqfymkyqci9figsnahdy1"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; @@ -11613,6 +11851,7 @@ in with self; { prim = derive2 { name="prim"; version="1.0.16"; sha256="0i5jpk798qbvyv9adgjbzpg4dvf7x51bcgbdp38fzdnam6g88y5a"; depends=[misc3d rgl]; }; primePCA = derive2 { name="primePCA"; version="1.0"; sha256="0kpyqv3l58xcyd98a7c7ggsna30j6k62aliidlyxgv2ya0g0dshv"; depends=[MASS Matrix softImpute]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; + primer = derive2 { name="primer"; version="1.1.1"; sha256="1hw7qd0xq3bvzk5ms9q568a3nkj3ws4jnzbmlypy8c5x3ly6pl1d"; depends=[deSolve lattice]; }; primerTree = derive2 { name="primerTree"; version="1.0.4"; sha256="15am88swc9h8igjnjqr4jg105i91lsl28nncqly03cgy4vm814kk"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr reshape2 scales stringr XML]; }; primes = derive2 { name="primes"; version="0.1.0"; sha256="0hhkgpkadvai9xcivfalsvr5w0irsxygyz3p2zngwl3g5rvvh5g9"; depends=[Rcpp]; }; princurve = derive2 { name="princurve"; version="2.1.4"; sha256="1b3grra328wkfsmqkkwp3lwdzhbdiwyq380qi5pl9r2jc6arnppj"; depends=[Rcpp]; }; @@ -11623,6 +11862,7 @@ in with self; { prioritizrdata = derive2 { name="prioritizrdata"; version="0.2.2"; sha256="1gljrll89r2y6nb4jwcp1pyjs5qrahqawi84kgg74w2q6xq65kga"; depends=[raster sp]; }; prioritylasso = derive2 { name="prioritylasso"; version="0.2.2"; sha256="1wdnizwq0mgjqbaxp6swf3z4wkdfig390i2d8jy86lg0q7gym5af"; depends=[glmnet survival]; }; prism = derive2 { name="prism"; version="0.1.0"; sha256="0d2llrpw5y0svrdzbk52pjrfp76lknrw4r8ciqq0cq3l6kbynh9r"; depends=[dplyr ggplot2 httr lubridate magrittr purrr raster readr stringr]; }; + prismatic = derive2 { name="prismatic"; version="0.2.0"; sha256="0j077khvagzs9lxrryi4q1czk1129r93cqf1i1hiz0b3wij2bwsg"; depends=[farver]; }; prisonbrief = derive2 { name="prisonbrief"; version="0.1.0"; sha256="1fnhg6vqdabdnhvgd19vnkfrdgz8a53snfrx6m6mmdwb6cvavb8m"; depends=[data_table dplyr httr magrittr passport rlang rnaturalearth rnaturalearthdata rvest stringr tibble tidyr xml2]; }; prithulib = derive2 { name="prithulib"; version="1.0.2"; sha256="12ybksrvxzc5gjz8m38cs35b7r3kd8m0zqm2c67pqw38vq82sjxm"; depends=[]; }; prnsamplr = derive2 { name="prnsamplr"; version="0.1.0"; sha256="0hdxbdkmxfd3ax1qfc4fj9bbxz8cv08qzcjwpxgkapgm2jwgxpgc"; depends=[]; }; @@ -11638,14 +11878,14 @@ in with self; { proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; processR = derive2 { name="processR"; version="0.1.0"; sha256="1c36f1l9ylj01hr5fs1413kixd3jx6fdhha4rw1mpcjbn9cxnjgq"; depends=[diagram dplyr flextable ggiraphExtra ggplot2 jtools lavaan magrittr modelr mycor officer prediction psych purrr rlang rrtable semTools shiny shinyWidgets stringr TH_data tidyr tidyselect]; }; processanimateR = derive2 { name="processanimateR"; version="1.0.1"; sha256="0dd09s7k46snwqjznpl38kz9xhlx9qd2n3h3y4ai7p7hpa96c22d"; depends=[bupaR DiagrammeR dplyr htmlwidgets magrittr processmapR rlang tidyr]; }; - processcheckR = derive2 { name="processcheckR"; version="0.1.0"; sha256="1arckp3m9z9idq8dq6aghijc6h8i6giir606h1viivrwj0ks0f90"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; + processcheckR = derive2 { name="processcheckR"; version="0.1.2"; sha256="1l8qx7ivw6vwmw7d7x7dawv11aklbyjwpyial3crhamnj5389ngj"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; processmapR = derive2 { name="processmapR"; version="0.3.3"; sha256="0skiavjays0qp9yvxfdzhp7iagz3zirq90m08lcl6sa83n5dj8rr"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr tidyr]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; processx = derive2 { name="processx"; version="3.4.1"; sha256="1g6ipcaxg9y94lyrnbp7kkbqfkcdh1fyrqjjclbjp3x7iysdvazi"; depends=[ps R6]; }; prodest = derive2 { name="prodest"; version="1.0.1"; sha256="16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509"; depends=[AER DEoptim dplyr Matrix Rsolnp]; }; prodigenr = derive2 { name="prodigenr"; version="0.5.0"; sha256="1h15fwd4rclja0q80y119sah1qbyjlbaqxg360ywq9ig151lxsjq"; depends=[fs git2r rmarkdown rprojroot usethis withr]; }; - prodlim = derive2 { name="prodlim"; version="2018.04.18"; sha256="1aslq87sqwikh8chxc378r38146y7kv79zz0kcq3j93ivx7va8jb"; depends=[KernSmooth lava Rcpp survival]; }; + prodlim = derive2 { name="prodlim"; version="2019.11.13"; sha256="03wvh3kirp1prac5nky6a5whs97rvaf4hc27x0fnh51sa17r42b8"; depends=[KernSmooth lava Rcpp survival]; }; productivity = derive2 { name="productivity"; version="1.1.0"; sha256="1g8b4vlyqq3xyzd4dki01glhc3g9j3ywgwpxylkmzp0ivqic53yc"; depends=[doParallel foreach iterators lpSolveAPI]; }; productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; @@ -11666,7 +11906,7 @@ in with self; { projects = derive2 { name="projects"; version="2.0.0"; sha256="0m9177ldp0d3f9k2ifrbww5snhvaql8h96shcdm46i1kjnzj4070"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble zip]; }; projmgr = derive2 { name="projmgr"; version="0.1.0"; sha256="1iysxcl6awvp7zbm04zyq4d9659fcz3sy711jnycsxhsk8hsvmc2"; depends=[gh magrittr]; }; projpred = derive2 { name="projpred"; version="1.1.4"; sha256="1zlay8pj86mj68nh332ki53pz1lpdbl1k181lpmkh9dxpak0nwg0"; depends=[ggplot2 loo Rcpp RcppArmadillo]; }; - promises = derive2 { name="promises"; version="1.0.1"; sha256="0n2mlv6bvfb4yhgcml696l9vkbw21pz0smqylivr606z99rwgny2"; depends=[later magrittr R6 Rcpp rlang]; }; + promises = derive2 { name="promises"; version="1.1.0"; sha256="01l0ydjvvy6afcg5d6pzvk1ikd3djq8n2flv8c831ksn68z0zsn8"; depends=[later magrittr R6 Rcpp rlang]; }; promote = derive2 { name="promote"; version="1.1.1"; sha256="1cdz4xqinyzpbbgkxxd4f86n1h8zj88vp5z6w01cxd5ykyjf5411"; depends=[httr jsonlite stringr]; }; promotionImpact = derive2 { name="promotionImpact"; version="0.1.2"; sha256="1mx745q37fqgn46y9qj3ql54r747qfab1yq8878g08cq6y696rmp"; depends=[crayon data_table dplyr ggplot2 ggpubr KernSmooth lmtest prophet Rcpp reshape2 scales stringr strucchange]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; }; @@ -11677,7 +11917,7 @@ in with self; { proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; propr = derive2 { name="propr"; version="4.1.6"; sha256="1zpqx0xcf0di3p8x48g8icjwisfans0b1x902mq9fcal0qyc5mi1"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; - protViz = derive2 { name="protViz"; version="0.4.0"; sha256="150i2q4nakz28f39kmhrchz4qsr8ax6y02512md94k8hq4hamxg1"; depends=[Rcpp]; }; + protViz = derive2 { name="protViz"; version="0.5.1"; sha256="0cznzm1ijlq33yd5wsa61prav77y2vi698w0n2fx1xcv504c4bjv"; depends=[Rcpp]; }; protag = derive2 { name="protag"; version="1.0.0"; sha256="1iaw2w1d7hdvlg5vplpqc49wq08dgmm0ifvp2v0ggqb8invvdnw8"; depends=[dplyr ggplot2 RColorBrewer]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; proteomics = derive2 { name="proteomics"; version="0.2"; sha256="01cd4sb79gcx8gbzl624scvjbwhgcsca1wdvvfkhsv7jfwdd2ry2"; depends=[foreach ggplot2 plyr reshape2]; }; @@ -11685,7 +11925,7 @@ in with self; { proto = derive2 { name="proto"; version="1.0.0"; sha256="1l843p8vckjckdhgv37ngv47fga5jzy0n00pmipvp05nnaixk54j"; depends=[]; }; protoclass = derive2 { name="protoclass"; version="1.0"; sha256="17d2m6r1shgb47v8mwdg1a7f5h29m5l7f5m0nsmv0xc90s9cpvk8"; depends=[class]; }; protoclust = derive2 { name="protoclust"; version="1.6.3"; sha256="1jwfzlxyi2mx3mry2xr2glc6fm6a9jc8fhsdzjbb4zgx7vx2vpqv"; depends=[]; }; - protolite = derive2 { name="protolite"; version="1.9"; sha256="18k2909af314k3av7vwnkcz0k7ykfwjk2891pyqnlkxmknmg69z6"; depends=[jsonlite Rcpp]; }; + protolite = derive2 { name="protolite"; version="2.0"; sha256="0vzdsngns3s4r272vh783d2v7576p4fgxbahzn2c9c6vfw7539vg"; depends=[jsonlite Rcpp]; }; proton = derive2 { name="proton"; version="1.0"; sha256="1mgaw54is8l6ac1rf8s70rj7kv9xgsfdrlvjz01ggfwg7c6pyr3s"; depends=[digest]; }; prototest = derive2 { name="prototest"; version="1.2"; sha256="07g58hq2qdpczqhjsv6dq1bya9rs958r103n91icw5yc19bvyhi2"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; protr = derive2 { name="protr"; version="1.6-2"; sha256="13vgiqkqqq1w2yj5f6i6scag0mr189zmisyvi6fgaw8g9dgxpxan"; depends=[]; }; @@ -11740,17 +11980,17 @@ in with self; { pterrace = derive2 { name="pterrace"; version="1.0"; sha256="15k5149jqjy20cck5121zsv2mk63amn5b8qgdlacivri9dpxjns1"; depends=[doParallel foreach plotly TDA viridis]; }; ptest = derive2 { name="ptest"; version="1.0-8"; sha256="1d30a23yknf7xgqj8adgr36pnh9dpffl1v5fq682f26fk3ss30qp"; depends=[quantreg]; }; ptinpoly = derive2 { name="ptinpoly"; version="2.4"; sha256="1jbj8z7lqg7w1mqdh230qjaydx2yb6ffgkc39k7dx8xl30g00i5b"; depends=[misc3d]; }; - ptmixed = derive2 { name="ptmixed"; version="0.3.1"; sha256="160d7a0h2qpa4mpg6al2jh73arxcx2ljqz15d1yydi8fy1yxrldw"; depends=[GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; + ptmixed = derive2 { name="ptmixed"; version="0.4.1"; sha256="0sqlg4pk383xig3q86c6x5dyb0ws4ccijr8v1w9526zcrabi4b8v"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; pts2polys = derive2 { name="pts2polys"; version="0.1.1"; sha256="1pnh8ajh95c8xzfa4bvd2w41fi7h0jcg003rsji6xsasly3q34vr"; depends=[Rcpp]; }; ptstem = derive2 { name="ptstem"; version="0.0.4"; sha256="0dx677c7qh7rbalsys1n3xv4hjdhd6qypjd1mrggfwz1bd4vig4j"; depends=[dplyr hunspell magrittr rslp SnowballC stringr tidyr tokenizers]; }; ptsuite = derive2 { name="ptsuite"; version="1.0.0"; sha256="1df273p8v6zvhy2jj6imhjigwj77grx6sxqmg0sidxwqny5d1d9c"; depends=[Rcpp]; }; - ptw = derive2 { name="ptw"; version="1.9-13"; sha256="0iighsx6xn8nbw4qpzmwgi4czmr5m8yrr7fzm7mx7cvx2r5ffmbq"; depends=[nloptr]; }; + ptw = derive2 { name="ptw"; version="1.9-15"; sha256="0ikvzc5vfcs50jl5n49mhk39pcijyfdxd26adgs01h0b50zh1yi2"; depends=[nloptr]; }; ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; pubchunks = derive2 { name="pubchunks"; version="0.2.0"; sha256="119ihi6xi9k3p5lv2qkch2jc2fqmf8h0wi7mqh57asg7n6f0qb6r"; depends=[data_table rcrossref xml2]; }; pubh = derive2 { name="pubh"; version="0.4.3"; sha256="18n6jyidq01gxbqvfal7ipgpjvfkdy71niy7w24dvvxnvcy7hc4l"; depends=[bookdown car desctable effects Epi epiR epitools knitr latex2exp lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR sandwich survival tactile]; }; pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.16"; sha256="1dcviy347lypbzwwz506d37wy5swla2vjgyqijwc37daic71bnih"; depends=[boot R2HTML RCurl XML]; }; - pubtatordb = derive2 { name="pubtatordb"; version="0.1.3"; sha256="0k16nq7fbsd07wkv6zys0jqdd35ikq3aiax3jdihk94gq46raqc1"; depends=[assertthat DBI dplyr R_utils readr RSQLite]; }; + pubtatordb = derive2 { name="pubtatordb"; version="0.1.4"; sha256="0i5azbf75bwxxzpsr5fc2hh22pbwix00hz9dcdpn5jgp2957f7wx"; depends=[assertthat DBI dplyr R_utils readr RSQLite]; }; pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; pulsar = derive2 { name="pulsar"; version="0.3.6"; sha256="0r1myng3wmirlp1ixqkkzlgv5i0my37irligah3wwfh0cprip1dm"; depends=[Matrix]; }; pulseTD = derive2 { name="pulseTD"; version="0.1.0"; sha256="0sdnswinpnm0vvplrh5gl9gx4p03dx175mqxzg5r52rkzd3rfbsr"; depends=[AnnotationDbi Biobase GenomicAlignments GenomicFeatures ggplot2 Rsamtools S4Vectors SummarizedExperiment]; }; @@ -11758,15 +11998,16 @@ in with self; { puniform = derive2 { name="puniform"; version="0.2.1"; sha256="0pizpq3v0jlvl41pqypk5i5ghyg2na8mysf2pcvihx4ha7415i51"; depends=[ADGofTest metafor Rcpp]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; purging = derive2 { name="purging"; version="1.0.0"; sha256="1b8f87jn6wyh4fp6b1660bd484wcf7xiajdg9dz2594aj1r94qsr"; depends=[MASS]; }; - purrr = derive2 { name="purrr"; version="0.3.2"; sha256="0ccs78a2ylr60f3z0f7iywi8h1pwr8mz4ga78bs4pwgnwkclvir7"; depends=[magrittr rlang]; }; + purrr = derive2 { name="purrr"; version="0.3.3"; sha256="17lyys7dxjrwsfkq7a7hw65iy3qn3pp1sn70srdy64jf8adahc8g"; depends=[magrittr rlang]; }; purrrlyr = derive2 { name="purrrlyr"; version="0.0.5"; sha256="0rcamyf7d01rpd9izh8xp66j130aqarfbc24p898dqhghb6q1ryq"; depends=[BH dplyr magrittr purrr Rcpp]; }; purrrogress = derive2 { name="purrrogress"; version="0.1.1"; sha256="1l7wr7jjpang9gx61pfw9qiapsviwpp13kbylmxvw7lz7q0khzcz"; depends=[assertthat glue hms pkgcond purrr R6 rlang testextra]; }; pushbar = derive2 { name="pushbar"; version="0.1.0"; sha256="1gxarv6x32y6ssrhsq3pyihzcvpnnj7bg0jf2cpcr99da78n1d9b"; depends=[jsonlite shiny]; }; pushoverr = derive2 { name="pushoverr"; version="1.0.0"; sha256="1zazrx0szx21ymn7zlkfqkhid0ar8jblnpnf5nycj0p7dbh6d0bd"; depends=[assertthat httr]; }; - pvaluefunctions = derive2 { name="pvaluefunctions"; version="1.4.0"; sha256="1cvym37l3vyanfvbb845fcdcy8xsqinj8vnz64wiqyb83hnq3cq7"; depends=[ggplot2 scales zipfR]; }; + puzzle = derive2 { name="puzzle"; version="0.0.1"; sha256="073n074irsvn4w1jy5xmr6l24a209kn0ypvf1d2zn3p6yd93wzss"; depends=[dplyr kableExtra lubridate plyr readr readxl reshape reshape2 sqldf tidyverse]; }; + pvaluefunctions = derive2 { name="pvaluefunctions"; version="1.5.0"; sha256="0gch4fkb7fdmqvckanpskfm51kw6dk86i77s74w2qhy3ig6vvi3c"; depends=[ggplot2 scales zipfR]; }; pvar = derive2 { name="pvar"; version="2.2.5"; sha256="1a5dxhki5nd5s1d5wwnc1dkg7mdib2s8w1i0l8mdg3f1g3l00klz"; depends=[Rcpp]; }; pvclass = derive2 { name="pvclass"; version="1.4"; sha256="1g6x75qz3xybq1xnik0hzi7mcs0gzzqd3f0iwfkzi5d1zcddnw13"; depends=[Matrix]; }; - pvclust = derive2 { name="pvclust"; version="2.0-0"; sha256="0hfpf257k5f1w59m0zq6sk0gaamflc3ldkw6qzbpyc4j94hiaihs"; depends=[]; }; + pvclust = derive2 { name="pvclust"; version="2.2-0"; sha256="0082icm54k2yq60k06qpr92a626k39j2jr0046lva4ylmhxqb4kq"; depends=[]; }; pvsR = derive2 { name="pvsR"; version="0.3"; sha256="1ijmqlcsc8z0aphdd3j37ci8yqsy50wnr2fwn7h8fxbyd12ax2nj"; depends=[httr nnet XML]; }; pwr = derive2 { name="pwr"; version="1.2-2"; sha256="0r5g781lr677vp3zyhgmi7r68c87l8gd05l1s3ffnxgn5wf043sm"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; @@ -11788,7 +12029,7 @@ in with self; { qCBA = derive2 { name="qCBA"; version="0.3.1"; sha256="0lr97hig9c4l9k7vjalvgar4f1dic1lqf91li4q63j07lgdyvh4c"; depends=[arc arules rJava]; }; qGaussian = derive2 { name="qGaussian"; version="0.1.8"; sha256="02xy35xg4swr1ldnsbywnz2h0ga1pbsivnj0aqmpll7kvwl9qz4c"; depends=[Rcpp robustbase zipfR]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; - qMRI = derive2 { name="qMRI"; version="1.0.1"; sha256="1b6wa3s9km22ymwhd7a1hxnaish4zhdi23w96mydjb32bf28x0rp"; depends=[adimpro aws awsMethods dti oro_nifti stringr]; }; + qMRI = derive2 { name="qMRI"; version="1.1.1"; sha256="05r5kzndmwxad3rkq4jrrg1i7gzclv32zfibsk84dwv90c4qrlyv"; depends=[adimpro aws awsMethods dti oro_nifti stringr]; }; qVarSel = derive2 { name="qVarSel"; version="1.0"; sha256="13x2hnqjsm0ifzmqkkl9ilhykrh80q04lhlkkp06hkysmh5w9rkx"; depends=[lpSolveAPI Rcpp]; }; qad = derive2 { name="qad"; version="0.1.1"; sha256="11v291swfl4llgzfffm786xqp9cn82vl8xlqjlma5wah7ig73rgh"; depends=[copula data_table doParallel foreach ggplot2 plyr viridis]; }; qap = derive2 { name="qap"; version="0.1-1"; sha256="0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"; depends=[]; }; @@ -11806,8 +12047,8 @@ in with self; { qdm = derive2 { name="qdm"; version="0.1-0"; sha256="0cfxyy8s5zfb7867f9xv9scq9blq2qnw68x66m7y7nqlrrff5xdr"; depends=[]; }; qfasar = derive2 { name="qfasar"; version="1.2.0"; sha256="067wnwwz8s0yxig13wrjq37w62kf8p5pa8my5lfpc1ik1b7iysby"; depends=[Rsolnp]; }; qgam = derive2 { name="qgam"; version="1.3.0"; sha256="0i0irz2jqi73d97zyy8xz2yi95y93kw3sr9xf4hmrjdd4k15l0wk"; depends=[doParallel mgcv plyr shiny]; }; - qgcomp = derive2 { name="qgcomp"; version="1.1.0"; sha256="1nh6z45rzfiv8zymxdigz6zd86x751ciwrmc85s1g3awn5bf6r1p"; depends=[ggplot2 gridExtra survival]; }; - qgraph = derive2 { name="qgraph"; version="1.6.3"; sha256="0makwk8kygqfi4hqzhfzd2jbljlwvs24mv7psr5wyh76g8392drn"; depends=[abind BDgraph colorspace corpcor d3Network fdrtool ggm ggplot2 glasso gtools Hmisc huge igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2]; }; + qgcomp = derive2 { name="qgcomp"; version="1.2.0"; sha256="1kpg0hjnmfvakzq45qpng92dhi3nfvm7qd5fgqy58z453hpg5hn4"; depends=[arm future future_apply ggplot2 gridExtra survival]; }; + qgraph = derive2 { name="qgraph"; version="1.6.4"; sha256="1glg814h7fwl1jfm6dw1d9i80bilmj5jcjjrfln15byrdh4mm1j3"; depends=[abind BDgraph colorspace corpcor d3Network dplyr fdrtool ggm ggplot2 ggraph glasso gtools Hmisc huge igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2 tidygraph]; }; qgtools = derive2 { name="qgtools"; version="1.0"; sha256="0irqfaj2qqx7n1jfc0kmfpgzqrhwwlj0qizsmya94zk9d27bcpn5"; depends=[MASS Matrix]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; }; @@ -11844,12 +12085,13 @@ in with self; { qrng = derive2 { name="qrng"; version="0.0-7"; sha256="1dw1qqajxavlnfyh6xn58069fpfza28x1xjzd3diqlcxxlb4hjaf"; depends=[copula randtoolbox]; }; qrnn = derive2 { name="qrnn"; version="2.0.5"; sha256="0ligz67kbfg5cmvacnb7y0ms1v0c7mbvbcfsxyfiz543ppl3xn1v"; depends=[]; }; qrsvm = derive2 { name="qrsvm"; version="0.2.1"; sha256="0qpj3c8qwrwr2asvp921av0mbdba1ayz0pdq4a52i1waqng4fgis"; depends=[doParallel foreach kernlab Matrix quadprog]; }; - qs = derive2 { name="qs"; version="0.18.3"; sha256="1rlfm2s7yx97z1fwi6prw7y8kpzfy902bxjqqk1znxmarza2wa13"; depends=[RApiSerialize Rcpp]; }; + qs = derive2 { name="qs"; version="0.20.2"; sha256="12iqfa5rmcvw8dhprg4w8xvk2qd5796rmdsl9bsj59ijzr7zwg82"; depends=[RApiSerialize Rcpp]; }; qsort = derive2 { name="qsort"; version="0.2.3"; sha256="1xvp29dijfa2207wyw3z09rmffn61fngfy0f00qjk284n1jnnvrg"; depends=[cowplot ggplot2 gridExtra purrr]; }; qsub = derive2 { name="qsub"; version="1.1.0"; sha256="0i52bibc782k09f5hp3ic9ll14fsrwjnkdxlb0mhkjvsqm7m5hc5"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; qtbase = derive2 { name="qtbase"; version="1.0.14"; sha256="1pcgjycq61x9h52sqr6fz83qjnlpbawvpavnn9hyw2b7jlv3nwfd"; depends=[]; }; qte = derive2 { name="qte"; version="1.3.0"; sha256="0x65n2qyq1py0nrachxkqd273mywkw433ai5x6ni3ak4ckbp3g66"; depends=[BMisc formula_tools ggplot2 Hmisc knitr msm pbapply quantreg texreg]; }; qtl = derive2 { name="qtl"; version="1.44-9"; sha256="03lmvydln8b7666b6w46qbryhf83vsd11d4y2v95rfgvqgq66l1i"; depends=[]; }; + qtl2pleio = derive2 { name="qtl2pleio"; version="1.2.3"; sha256="0ihlp6glsw4pk97vpqlcbd6zmg0qww3i19c1b76vx1wkazjg6pd8"; depends=[dplyr gemma2 ggplot2 magrittr MASS Matrix Rcpp RcppEigen rlang stringr testthat tibble]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; qtlbook = derive2 { name="qtlbook"; version="0.18-8"; sha256="1c849xy2ki7niddajv5wnsm0zdp5381w8zm9lc8rvkdbs2v6rhf4"; depends=[]; }; qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; }; @@ -11862,7 +12104,7 @@ in with self; { quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; quadmatrix = derive2 { name="quadmatrix"; version="0.1.0"; sha256="0nngrvvbalmrr6g9bq9f5qrllvwfq5p1b9yhs4zb098s3wga8jms"; depends=[geigen matrixcalc]; }; quadmesh = derive2 { name="quadmesh"; version="0.4.0"; sha256="196p1qiis1hbs8yxd5570cqln0zcp3ngbajf3rsc0rwgjzqgm3wv"; depends=[geometry gridBase png raster reproj scales sp viridis]; }; - quadprog = derive2 { name="quadprog"; version="1.5-7"; sha256="0vg7i9p241bwvfdspjbydjrsvgipl6nsb8bjigp0hbbgvxbixx0s"; depends=[]; }; + quadprog = derive2 { name="quadprog"; version="1.5-8"; sha256="1ka9g8zak8sg4y2xbz93dfrldznlk9qpd4pq9z21cdcdn3b8s4i2"; depends=[]; }; quadprogXT = derive2 { name="quadprogXT"; version="0.0.4"; sha256="1bqjlqihb371ggds60219x474b6n4wsl6fnia8hd410iyn9wm05g"; depends=[quadprog]; }; quadrupen = derive2 { name="quadrupen"; version="0.2-7"; sha256="05yn9cnnc1481k8yqc6dg5hcv0ll4v3h2yw3qyaarwhgyxiips11"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; }; qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; @@ -11872,14 +12114,15 @@ in with self; { qualpalr = derive2 { name="qualpalr"; version="0.4.3"; sha256="1hlssqj2129796d00gnip3ih5b705qasw0hkj25xfz7xak0vdbkm"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; qualtRics = derive2 { name="qualtRics"; version="3.1.1"; sha256="092f8d59g5b5619q6v4vkpjw8za5rrmhv805xg95m3z0xcscg1rl"; depends=[assertthat dplyr httr jsonlite purrr readr rlang sjlabelled stringr tibble yaml]; }; qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; + qualypsoss = derive2 { name="qualypsoss"; version="1.0.0"; sha256="1pvf9b9yw8317wnh1x1jkmwl4cl0r9q7npfw0xzgbs8mfpl9j2ah"; depends=[doParallel foreach MASS mvtnorm]; }; quantable = derive2 { name="quantable"; version="0.3.6"; sha256="15q4phc2j7aihl8f4qzpdwxcvshq2cfzkfcxc8k4qypsxk9a00sb"; depends=[caret dplyr e1071 ggplot2 ggrepel gplots Matrix plyr pROC RColorBrewer readr reshape2 rlang scales stringr tibble tidyr]; }; - quanteda = derive2 { name="quanteda"; version="1.5.1"; sha256="08hzgqza853jrk0r6cgn5398k0llfpm6jk4hs4rw8l2dn0520nq5"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network proxyC Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi xml2 yaml]; }; + quanteda = derive2 { name="quanteda"; version="1.5.2"; sha256="0iv25rpx5cl9ansazjs0qb97pniajrxf4mqsnb5q98y2hil9ipd3"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network proxyC Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi xml2 yaml]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; - quantities = derive2 { name="quantities"; version="0.1.2"; sha256="01h0d2cmqqyqch98d8pgv3n2rvp3vc3sby95srahgcrrlxmmrrvj"; depends=[errors Rcpp units]; }; + quantities = derive2 { name="quantities"; version="0.1.3"; sha256="0crcwcr53bpqj07q5hvqkpq1sg9ikwz3nig2ifshqq5g2a3m57qs"; depends=[errors Rcpp units]; }; quantmod = derive2 { name="quantmod"; version="0.4-15"; sha256="0lyzaf5ypk93v6zj9gdghy05cc7cxgn9yasv1apx5r6qsjcfgwky"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; - quantreg = derive2 { name="quantreg"; version="5.51"; sha256="1cdx51a9g6fjq2g9arr6wp6ghkyl2m6bs2dj4kcycvpn8p9304yz"; depends=[Matrix MatrixModels SparseM]; }; + quantreg = derive2 { name="quantreg"; version="5.52"; sha256="0rq9as31wiz41lmi9hmdq3gknpcbpwqzfcn065ysjdxzjdb57dcy"; depends=[Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; quantregGrowth = derive2 { name="quantregGrowth"; version="0.4-3"; sha256="0q2yk51hcn7jnvh14nxa7szfj4pr9grh5rdfwazaziilbwqdmw4f"; depends=[quantreg]; }; @@ -11904,8 +12147,8 @@ in with self; { quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; quotedargs = derive2 { name="quotedargs"; version="0.1.3"; sha256="11cswg9bmddsl1axxcdz11flq46p1zkpv022526f2vgl4qsprwbm"; depends=[]; }; qut = derive2 { name="qut"; version="2.1"; sha256="1wkk4c4f10a1whrspr5yalp7flcxckzxlx187ymmpnz7qcncz619"; depends=[flare glmnet lars Matrix]; }; - qvcalc = derive2 { name="qvcalc"; version="1.0.0"; sha256="1x8ywx0vzssvjk99a7hp4razcvnggd7bhpgqn14zg74w07fmjgvc"; depends=[]; }; - qwraps2 = derive2 { name="qwraps2"; version="0.4.1"; sha256="0p1fc9h2c6ax3iz6dw03ljr394sbj1p9j2wsd26anc1pr047jy25"; depends=[dplyr ggplot2 knitr magrittr Rcpp RcppArmadillo rlang tidyr]; }; + qvcalc = derive2 { name="qvcalc"; version="1.0.1"; sha256="1wr5zivnfwscrzhw9myc5llpac0xjkz51s6hravjhflmp8s8lm7k"; depends=[]; }; + qwraps2 = derive2 { name="qwraps2"; version="0.4.2"; sha256="14h9xwv6x5lci17hg048a6n0cp3d2rif4v0g7dr05w504h157kw9"; depends=[dplyr ggplot2 knitr magrittr Rcpp RcppArmadillo rlang tidyr]; }; r_blip = derive2 { name="r.blip"; version="1.1"; sha256="1p33g6i6fq9c27d5ix9nd8prv90i4hrf91x34bldlw8041sjqxm0"; depends=[bnlearn foreign]; }; r_jive = derive2 { name="r.jive"; version="2.1"; sha256="0l0bhhp6bdc84pzxi7gnsxx3scycw0zahrnc496wx3j43np9hlsg"; depends=[abind gplots SpatioTemporal]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; @@ -11915,12 +12158,12 @@ in with self; { r2pmml = derive2 { name="r2pmml"; version="0.23.0"; sha256="1md7fzx7yc6b3plflcq4c109v2plhvb1a6dg628bhyiicjs1s83c"; depends=[]; }; r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; }; r4lineups = derive2 { name="r4lineups"; version="0.1.1"; sha256="1p0dnrp21zx1l9lqx01jnq54d5ppb8siibv47i4gsp7c7db9ymxc"; depends=[boot dplyr ggplot2 ggrepel here magick magrittr pROC psych purrr]; }; - r4ss = derive2 { name="r4ss"; version="1.24.0"; sha256="1kifzfg2zx6lq2c8qqbhb096z1wgdayhg5qzx5hnkwpn05w5cma3"; depends=[coda corpcor gplots gtools maps pso truncnorm]; }; + r4ss = derive2 { name="r4ss"; version="1.36.1"; sha256="03xin7avdbg5ayrcdbw5rx9sh6ingjq2kv3405h01vqf1jhkfsxk"; depends=[coda corpcor gdata gplots gtools kableExtra pso truncnorm]; }; r511 = derive2 { name="r511"; version="0.1.1"; sha256="1njsnjf0746cv6x7fznq4cg556fczqcfawwb869r3w9zv0zj1iy9"; depends=[assertthat dplyr httr tibble xml2]; }; r6extended = derive2 { name="r6extended"; version="0.1.2"; sha256="1kq1j5rx57053mslj8jx1s0wjvhis7x3y264zw44q4k2x48q9wxs"; depends=[digest hellno magrittr R6]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; }; - rAmCharts = derive2 { name="rAmCharts"; version="2.1.11"; sha256="1r8k2ri03pyxkh76hcbsxmmmyy4dqdx7dfldpkni4s9m0kj1bcqn"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; + rAmCharts = derive2 { name="rAmCharts"; version="2.1.12"; sha256="16ha5f21xlvpk59sxrwks5l5bsw4ldz0psgs0l2sq7cz144qls5f"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; rAverage = derive2 { name="rAverage"; version="0.5-8"; sha256="09yap3qv02k5nidi6a4png9xa5yy7cb8hg8s2dq99wnc88s42d26"; depends=[]; }; rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; }; rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; }; @@ -11936,11 +12179,12 @@ in with self; { rDEA = derive2 { name="rDEA"; version="1.2-5"; sha256="1wsi2dkq9izvbhdqmd4qk8i277r1j38dk59fcmnxnwqvk6ar6nrb"; depends=[maxLik slam truncnorm truncreg]; }; rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; - rEDM = derive2 { name="rEDM"; version="0.7.2"; sha256="1k7i8idn3aybkwld0093ixkn7ijqfrgqprgan5a9xmipp4divla4"; depends=[Rcpp RcppEigen]; }; + rEDM = derive2 { name="rEDM"; version="0.7.3"; sha256="1k5k5qpm5icgsdl859my9gx3p27fldlbbcsdzr378aaqg351pvqx"; depends=[Rcpp RcppEigen]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; - rENA = derive2 { name="rENA"; version="0.1.6.1"; sha256="1j1nli1mk737ksy6j499vyi0lblwyrr7h28rmpiriy0w9hh54dh1"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel scales]; }; + rENA = derive2 { name="rENA"; version="0.2.0.0"; sha256="0hr45rcd756fny7sk79p2sav34jdnrc67887jgncm4jwh3bd9d6l"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppParallel scales]; }; rERR = derive2 { name="rERR"; version="0.1"; sha256="1ymf0v3r2sv9m72c19csk38fy5kmld3i18jh06rir5kxkb5l245p"; depends=[dplyr ggplot2 numDeriv plyr reshape2 survival]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; + rFIA = derive2 { name="rFIA"; version="0.1.1"; sha256="0yd20kgcr3lszqx63ihg05lkpnw80xlnarn4lq96yay93icmarx8"; depends=[bit64 data_table dplyr gganimate ggplot2 progress sf sp stringr tidyr]; }; rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; }; rFerns = derive2 { name="rFerns"; version="3.0.0"; sha256="0z12201y1b9d3rd02k4y64hpnlrgkg7pi1jpzsh1br4pchdf7rrm"; depends=[]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; @@ -11959,12 +12203,11 @@ in with self; { rLDCP = derive2 { name="rLDCP"; version="1.0.2"; sha256="0k7zc1xyqmcl7070hhpqw1d2k1ij6bd4wjym8cw263pds2n7nx21"; depends=[XML]; }; rLTP = derive2 { name="rLTP"; version="0.1.4"; sha256="04w432m03xwh0szshsrfw5h7wy43q4lj8z0y07k8w6gsf27cy5bx"; depends=[RCurl]; }; rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.4.1"; sha256="1bwg8mzddsc39km85b41bxp2hwqmb4g5a3010f6yp1qlgcb9rmj1"; depends=[plyr]; }; - rLandsat = derive2 { name="rLandsat"; version="0.1.1"; sha256="0zbmd36fs2rwdw4x2aphp44q3abyh4zj3dvx9z6jbkgwlsxvck0v"; depends=[dplyr httr jsonlite RCurl readr stringr svMisc]; }; rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; rMEA = derive2 { name="rMEA"; version="1.1.0"; sha256="1aarnik0qjxg6h55xpskx1dwkp78nfdyrwpy9r6ffyxhz9jbplnj"; depends=[]; }; rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; - rMVP = derive2 { name="rMVP"; version="0.99.16"; sha256="1fmnbz7cmmf0zkikag3q2nfw7fmjizki8db0lwgvx3kw48p4l912"; depends=[BH bigmemory MASS Rcpp RcppArmadillo RcppEigen RcppProgress]; }; + rMVP = derive2 { name="rMVP"; version="0.99.17"; sha256="1ddnvpi5m3z52z0prcsi9bd2cp2axgl7nry50rmgxjfv7nal61bl"; depends=[BH bigmemory MASS Rcpp RcppArmadillo RcppEigen RcppProgress]; }; rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; rNOMADS = derive2 { name="rNOMADS"; version="2.4.1"; sha256="0qag0riwkrzgybwfbhpkapjcf7ccqrqa4j8zqh3xx0548k8mm37l"; depends=[fields GEOmap MBA RCurl rvest stringr uuid XML]; }; @@ -11978,10 +12221,10 @@ in with self; { rQCC = derive2 { name="rQCC"; version="0.19.8.2"; sha256="091c53jggq3k9sf48pnds8s4kkqia6x268lbkb2fx88b408i0iny"; depends=[]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; rSCA = derive2 { name="rSCA"; version="3.0"; sha256="1ka8p1slqb3a9hfc8z4j7v90k0wn6y35vmwxqaf8jlgwfhhc1v9f"; depends=[]; }; - rSEA = derive2 { name="rSEA"; version="2.0.0"; sha256="129qj44x4151f5516fv041l0hmzj38l9xjqhvmbvq240iflgqmf1"; depends=[hommel]; }; + rSEA = derive2 { name="rSEA"; version="2.1.0"; sha256="0zym2kg7vzi61xiglwr3dw5kvavjqcgjj56219aqyclkqrnf67rc"; depends=[hommel]; }; rSFA = derive2 { name="rSFA"; version="1.04"; sha256="0gd6ji1ynbb04rfv8jfdmp7dqnyz8pxcl5636fypd9a81fggl0gs"; depends=[MASS]; }; rSHAPE = derive2 { name="rSHAPE"; version="0.3.2"; sha256="0z6dizsxlkmaymbd24b1m1i8kmndcf21nxxnyfzq6gvdii7bal4h"; depends=[abind DBI doParallel evd foreach RSQLite sn VGAM]; }; - rSPARCS = derive2 { name="rSPARCS"; version="0.0.6"; sha256="0fvzvsi33lhgr6ik7038blv45wyfl5s4whd2qvyy7m945y0f7dzd"; depends=[data_table geosphere plyr raster sp spatialEco tigris]; }; + rSPARCS = derive2 { name="rSPARCS"; version="0.0.7"; sha256="0z9l7d03r5qxnnl9as2dl1z8r8a28qbwp8n69sxrnd7rffcwm17l"; depends=[data_table geosphere plyr raster sp spatialEco tigris]; }; rSPDE = derive2 { name="rSPDE"; version="0.4.6"; sha256="1fdk7mhrkp5r7lr9rn9wz1rbxinrr8yvfcss9ky8namp7f65vwa1"; depends=[Matrix]; }; rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; rSymPy = derive2 { name="rSymPy"; version="0.2-1.2"; sha256="0jdl8ss3dbgjqrmmppb0ix1gqk9g28pbh6w5sybil046ic83s13i"; depends=[rJython]; }; @@ -11994,11 +12237,11 @@ in with self; { rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; rWind = derive2 { name="rWind"; version="1.1.3"; sha256="1q9f7mrjks7nb9lgkmi6w774dz479d2hhzhns0v0mrllmv9nck1s"; depends=[gdistance lubridate Matrix raster]; }; - rWishart = derive2 { name="rWishart"; version="0.1.1"; sha256="1zv35l2nvwwidx5zxfh7a4jgiaq2mqk69xf974994k1ksfvibkmi"; depends=[lazyeval MASS Matrix]; }; + rWishart = derive2 { name="rWishart"; version="0.1.2"; sha256="0wzijc454mrvmggb7a5jqwjbmk0kzr4bmy0iwniz5cn343pr1rri"; depends=[lazyeval MASS Matrix]; }; rYoutheria = derive2 { name="rYoutheria"; version="1.0.3"; sha256="1r63ggy4knwzxnpjkmsn7zwmwfaznm8mmxl7r9ph10wz4sblgygl"; depends=[plyr RCurl reshape2 RJSONIO]; }; rabhit = derive2 { name="rabhit"; version="0.1.1"; sha256="010ayd8hyk02gwpnpa06n2rymxl1hy3j4jm5cn4x2xl3mj2kzg8h"; depends=[alakazam cowplot data_table dendextend dplyr ggdendro ggplot2 gridExtra gtable gtools htmlwidgets plotly RColorBrewer reshape2 rlang stringi tidyr tigger]; }; rabi = derive2 { name="rabi"; version="1.0.0"; sha256="1ljs6wgdw045q1acdmci5b3p8qxhhm4d6bdj64nha76fnq2rr76x"; depends=[numbers polynom shiny stringdist]; }; - raceland = derive2 { name="raceland"; version="1.0.0"; sha256="058hpimpbzxda7h6walxczp9ndfs7480189w0rml085cpl2g3mwm"; depends=[comat fasterize plotwidgets raster Rcpp RcppArmadillo sf]; }; + raceland = derive2 { name="raceland"; version="1.0.3"; sha256="0gd5x3k1mdk6s1svgv9vgy2bzml6qg74rfr6p009g2bkbxpcjydy"; depends=[comat fasterize plotwidgets raster Rcpp RcppArmadillo sf]; }; radar = derive2 { name="radar"; version="1.0.0"; sha256="1wh5j3cfbj01jx2kbm9ca5cqhbb0vw7ifjn426bllm4lbbd8l273"; depends=[]; }; radarBoxplot = derive2 { name="radarBoxplot"; version="1.0.0"; sha256="16s38yy984mb1hmsdw17z4nk2z4xg03xi0yrp7445yqv3fs1fghl"; depends=[]; }; radarchart = derive2 { name="radarchart"; version="0.3.1"; sha256="0gcxnbgj8ja1m4wzhbjy67m6zphf0c5ni9yx7sr7f0abm03ry753"; depends=[htmltools htmlwidgets]; }; @@ -12021,11 +12264,9 @@ in with self; { ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.2"; sha256="03613amz11ixgkjhc8rg4vp3ih60g1ibhdjrldr9mazzkak46y91"; depends=[abind expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; ragtop = derive2 { name="ragtop"; version="1.1.0"; sha256="1gz4hdfb4yxjqcmclxw2yacpk0km29n3gfpqkcj48wr1s6vv7djb"; depends=[futile_logger limSolve]; }; rai = derive2 { name="rai"; version="1.0.0"; sha256="0qimfzchbrarkwmv3mxxbdgvqzk16sc8m1h140zm0cnfgr2pvi5p"; depends=[dplyr ggplot2 readr rlang]; }; - railtrails = derive2 { name="railtrails"; version="0.1.1"; sha256="1hi55rcxmr7k3na3rpjqmd5fpgn51bymrp7yxmw45ff7mlzpa5h6"; depends=[tibble]; }; rainbow = derive2 { name="rainbow"; version="3.6"; sha256="11vfcck17d2xjc049ci5i8l1nqv345anmd110gdz7654i1pj9lb3"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; }; rainfarmr = derive2 { name="rainfarmr"; version="0.1"; sha256="1gasnmyjnis6vv0krx6299ck2a6v9v1fgqajzqdpjaz2fsxn245i"; depends=[]; }; - rainfreq = derive2 { name="rainfreq"; version="0.3"; sha256="0985ck2bglg22gfj7m0hc7kpk0apljsbssf1ci99mgk47yi8fk9v"; depends=[RCurl SDMTools]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; ramchoice = derive2 { name="ramchoice"; version="1.1"; sha256="1im9r95109919hfmici6avdqxh3a375wmg2lfy75z1gjivvcygbr"; depends=[MASS]; }; ramcmc = derive2 { name="ramcmc"; version="0.1.0-1"; sha256="0x8q0bah8fcyqlwap9iw52xhl6b989va5c144kgmfimh2b4yinc7"; depends=[Rcpp RcppArmadillo]; }; @@ -12042,22 +12283,23 @@ in with self; { random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-2"; sha256="1ybwfn3hdwisxjn85vqrib1zhk8dcddbarbwjdf1vn27ih3c4h2c"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; randomForest = derive2 { name="randomForest"; version="4.6-14"; sha256="0kbmm0l42fc2d1rdq0l7k09d34kd87q4lx651ffsic4y84h8kf7l"; depends=[]; }; randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.10.0"; sha256="08j4mj6r595kzkrgkvjhkda9x6w275nmnvmmhmyk0knq2p2g7p2r"; depends=[data_table dplyr DT GGally ggplot2 ggrepel randomForest ranger reshape2 rmarkdown]; }; - randomForestSRC = derive2 { name="randomForestSRC"; version="2.9.1"; sha256="1vylj5mdhy11nda644yn7mdz9kf64a9zz8j317y5n1jmzvx4fyii"; depends=[]; }; + randomForestSRC = derive2 { name="randomForestSRC"; version="2.9.2"; sha256="0x3d9sycrn4yfsdx8b543d1jnrw7i0klsvapvzx7c9hbr83vq3vq"; depends=[]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; randomLCA = derive2 { name="randomLCA"; version="1.0-15"; sha256="10rx2ah50dcjxz5y492c59d3pn0dvlgjaxfdf8sknkf6s4pmwkis"; depends=[boot fastGHQuad lattice Matrix]; }; randomNames = derive2 { name="randomNames"; version="1.4-0.0"; sha256="1kchngfjv53n32z2qjrplp2xmssl8gjx1y3m7bxsfq1wjzj52qf5"; depends=[crayon data_table toOrdinal]; }; randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; }; - randomcoloR = derive2 { name="randomcoloR"; version="1.1.0"; sha256="0sirxgrf7xf470d7lls45c698l6c078hqjkjcswmwz6kphykrzhg"; depends=[cluster colorspace Rtsne scales stringr V8]; }; + randomcoloR = derive2 { name="randomcoloR"; version="1.1.0.1"; sha256="0rqh1zrdza12qq7475f77yvryhh4hj0pg25lb8ywrcljgaj53bnb"; depends=[cluster colorspace Rtsne scales stringr V8]; }; randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; randomizeBE = derive2 { name="randomizeBE"; version="0.3-5"; sha256="08yfdrf56i8php48ycilc79jk7ms0f6k40swg56mccnqm2yb3b12"; depends=[]; }; - randomizeR = derive2 { name="randomizeR"; version="1.4.2"; sha256="0jv0mc40cy4w17jrsb2023l7k7cnzl9czdigl4shq9nx67mccdwx"; depends=[ggplot2 plotrix]; }; + randomizeR = derive2 { name="randomizeR"; version="2.0.0"; sha256="1bcdh245lh5a2yim00m2cgcmlcjm2vyba813026v0a4c42gr3b8x"; depends=[ggplot2 plotrix survival]; }; randomizr = derive2 { name="randomizr"; version="0.20.0"; sha256="0dljyfldnardaps3fq6vi5wcs9x6qfaq5apapa78c51lnaa6fn9h"; depends=[]; }; randomsearch = derive2 { name="randomsearch"; version="0.2.0"; sha256="0ywr4ms66p5nmq8bzy04gbvmpp0nhfyf8rvynhr2c4alqva9x3yi"; depends=[checkmate fs parallelMap ParamHelpers smoof]; }; + randquotes = derive2 { name="randquotes"; version="0.1.1"; sha256="0fj9vx0c4059511wka7ip30yz87y144pz7ny840gp72qm73pp8li"; depends=[curl httr jsonlite xml2]; }; randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; randtoolbox = derive2 { name="randtoolbox"; version="1.30.0"; sha256="141p13ajgzmb2s89rlac7zrra92mi1izvpfrngb4kqzlf3igdsqd"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.4"; sha256="1jjy1d3kljysm3mqgdszdi6incbmg2di63akxswfaiqcp1m68a6y"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; - rangeMapper = derive2 { name="rangeMapper"; version="0.3-5"; sha256="1y34b23mayx8h12lvgv4dvnv009pvs145xh1csnzvg15x4s2z6fa"; depends=[classInt data_table doFuture foreach future future_apply ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; + rangeMapper = derive2 { name="rangeMapper"; version="0.3-7"; sha256="0b457qxlhwcnsw9x60mccvivq7a5cg7lkyfmsfva7qaipnjixcmh"; depends=[classInt data_table doFuture foreach future future_apply ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.2"; sha256="1d31nz2izppkj0zsm6iq74py5s7zg4w3vvjjxzbzprnj2x6r9zlw"; depends=[biomod2 dismo dplyr ecospat ENMeval googlesheets jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; rangemodelR = derive2 { name="rangemodelR"; version="1.0.4"; sha256="0y8hdqi04n3pc3iwz82gikn61h42bmfi7iccwgbglk8wkrkg4gy0"; depends=[]; }; ranger = derive2 { name="ranger"; version="0.11.2"; sha256="1sxyzxmjc6lm8wcmq15j6sscnza7aay4mr3dyri2zngx6fa8mb0k"; depends=[Matrix Rcpp RcppEigen]; }; @@ -12076,17 +12318,17 @@ in with self; { rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; - rarhsmm = derive2 { name="rarhsmm"; version="1.0.7"; sha256="0pvqa6f0ib1jb0rwc6wv6hfinncb21v2g0y0hsy5l33gdagjw2sz"; depends=[glmnet Rcpp RcppArmadillo]; }; rasciidoc = derive2 { name="rasciidoc"; version="2.0.0"; sha256="1bqabjr8h0ldhmf7mirk0fkv6nrv80zrm2vrx836ib5cxb2hw1yv"; depends=[document highr knitr]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.3-3"; sha256="03jqf5y5vj354m9psp81wzw6d7dfqr76bfjqv9kannsakkj587sy"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; raster = derive2 { name="raster"; version="3.0-7"; sha256="0faxv71hlxkblvbi3ps1vfzm3wwi0brwzmpsr5114bddcqyiqkvn"; depends=[Rcpp sp]; }; - rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; }; + rasterImage = derive2 { name="rasterImage"; version="0.4.0"; sha256="191m5k1rbbwziznmxbsq4g55afkw8gb5011i70f3wx3dscr3phxz"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; rasterVis = derive2 { name="rasterVis"; version="0.46"; sha256="0lzjqkm22qfcmzgnjv9k9b49hx9xa3vjwcl9935a5kjqsn57ipdy"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; rasterize = derive2 { name="rasterize"; version="0.1"; sha256="18nrhmq1qmi05rkyr86xsyc8nz0fbdpf2d45h62bbfzbfynqd4qy"; depends=[png]; }; - rasterpdf = derive2 { name="rasterpdf"; version="0.1.0"; sha256="00l83a26b76wpg0nd9cqms7d5yqw8cg4k5f94j34bxl3d7bzx5vc"; depends=[png]; }; + rasterly = derive2 { name="rasterly"; version="0.1.0"; sha256="128699nc1y2parfwqfx31afdy3f91z5iarpx8q1v5qfmbmb12ppx"; depends=[data_table ggplot2 magrittr plotly Rcpp rlang]; }; + rasterpdf = derive2 { name="rasterpdf"; version="0.1.1"; sha256="0zi54nifbb4dzb29i8rskynblw3z42vzaykwbq30ia5zs9q1bvm5"; depends=[png]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.4.1"; sha256="06x759jxr5zcnvg9q120n5bpipkb16piw15kxrpk7i918mby889b"; depends=[assertthat]; }; ratematrix = derive2 { name="ratematrix"; version="1.2.1"; sha256="0hbwfgwkkd5a83f3nqk5gdyiqbpzsgshvcjcslaz73si05zsrkgs"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; @@ -12100,8 +12342,10 @@ in with self; { raw = derive2 { name="raw"; version="0.1.6"; sha256="0hnqwa9pwj3k2y0bs6hxrvbwksjyq0q6m73c9hhlafg8g3lkyxnf"; depends=[]; }; rawr = derive2 { name="rawr"; version="0.1.0"; sha256="1a8r1vyvki3z2ms4miqv6wq9pzympgifsjx0pzzs6f4b40m083lq"; depends=[dplyr jsonlite rvest xml2]; }; raws_profile = derive2 { name="raws.profile"; version="0.1.0"; sha256="04f7wk7x9j3rb6nn3zqss9vw0h9a4vpcjyilc2vqy0fm2by41xkg"; depends=[stringr tibble withr]; }; - rayshader = derive2 { name="rayshader"; version="0.11.5"; sha256="1sycybfpw0d5d7f2579047jr60vay26hzqlvj8a5c9czdyrvlcxs"; depends=[doParallel foreach ggplot2 imager magrittr png progress raster Rcpp RcppArmadillo rgl scales]; }; + rayrender = derive2 { name="rayrender"; version="0.4.2"; sha256="070h6p7dmai0rrdiyghr97i3jn9yj86ak74zvw019b6g50rid6h6"; depends=[assertthat magrittr png progress purrr raster Rcpp RcppThread tibble]; }; + rayshader = derive2 { name="rayshader"; version="0.13.1"; sha256="0szwa07kyakgyd0cgj9fl9v7szchi8bqg2j2v8pqmxzs6i103qhr"; depends=[doParallel foreach ggplot2 imager magrittr png progress raster rayrender Rcpp RcppArmadillo rgl scales]; }; rbacon = derive2 { name="rbacon"; version="2.3.9.1"; sha256="0gnvi0aaw4yyg1cvrdyps2590gx1lwcjl21y4q9zn3k00mnwmc12"; depends=[coda Rcpp]; }; + rbamtools = derive2 { name="rbamtools"; version="2.16.17"; sha256="0qj37ljdva3v29s01dkrbg31mcfzy3bl145cp40d54v4h9xhcghc"; depends=[refGenome]; }; rbart = derive2 { name="rbart"; version="1.0"; sha256="1byfm1ycw9nfhdblqklyn8pxn6b9q5fa3inbgfpynqpsid97ig35"; depends=[Rcpp]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; @@ -12110,15 +12354,16 @@ in with self; { rbi = derive2 { name="rbi"; version="0.10.2"; sha256="158yi9d8pxgb5b1x1qpjzrfnq673vmsbmgm00w0dbk03akcvlfzc"; depends=[data_table ncdf4 processx reshape2]; }; rbi_helpers = derive2 { name="rbi.helpers"; version="0.3.1"; sha256="0hngqbdydvvp4zmicvnnmwz3fw6pjvgdxp7h80zk1qczid2yg4x5"; depends=[data_table lubridate Matrix rbi reshape2]; }; rbin = derive2 { name="rbin"; version="0.1.1"; sha256="1rbwm5xc61sva1m3n5hd9vsh7gm4hamswny35zm7j0fyc4v4bzxz"; depends=[DescTools dplyr forcats ggplot2 glue magrittr miniUI purrr recipes rlang rstudioapi shiny tibble]; }; - rbiouml = derive2 { name="rbiouml"; version="1.8"; sha256="0qvc896sf6idczbxix3klf56paxf0wpfbmga8qqlcyjasv1dsdql"; depends=[RCurl RJSONIO]; }; + rbiouml = derive2 { name="rbiouml"; version="1.9"; sha256="01ysjq49nhawp0r2by7b15s4b7bzsbn2xhdcyyrh38vrl04rpf57"; depends=[RCurl RJSONIO]; }; rbison = derive2 { name="rbison"; version="0.8.0"; sha256="0x2yiq1wvm6mzmhfa3ds8mmhidv91hxi14nhz4nib6nmna3c9al2"; depends=[crul data_table dplyr ggplot2 jsonlite mapproj plyr sp]; }; rbit = derive2 { name="rbit"; version="1.0.0"; sha256="09ywr711gv0vgfims2vfcxk3rnd0iadzlksil0q9159yarapfc59"; depends=[R6]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; - rblt = derive2 { name="rblt"; version="0.2.4.3"; sha256="0s205cyhndcs3gjyh311fii9pmckp5mp4w9sagdpa4qsjh5x1hx4"; depends=[data_table dygraphs h5 shiny xts]; }; + rblt = derive2 { name="rblt"; version="0.2.4.4"; sha256="0psxv9rrbyk4j4nh60fwcn67xk2czhyzdjvjn52256ag192z6lms"; depends=[data_table dygraphs h5 shiny xts]; }; rbmn = derive2 { name="rbmn"; version="0.9-2"; sha256="1zy832y399cmfmhpyfh7vfd293fylf1ylmp8w8krkmzkmyfa80f2"; depends=[MASS]; }; rbokeh = derive2 { name="rbokeh"; version="0.5.0"; sha256="1lpbph6bhh9rf5rs0ivp8dchx8i8ylz5nr7xc2xv9bnwlwj35729"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; rbraries = derive2 { name="rbraries"; version="0.1.0"; sha256="12vdci4rzjvd419nxh99hpkhjlx86nsmrbjca0am5q0rkc68dgmj"; depends=[crul data_table fauxpas jsonlite tibble]; }; + rbridge = derive2 { name="rbridge"; version="1.0"; sha256="1ggak2rp20vs3zzpl86yaa9dkxxwmnznbzxcy4wzdgsllmfij628"; depends=[dplyr Matrix Rcpp RcppArmadillo]; }; rbtc = derive2 { name="rbtc"; version="0.1-6"; sha256="1z5p1jn5b0hzwcbdpiwj224h45x01bbsgkskllir5j13l416561p"; depends=[gmp httr openssl rjson]; }; rbtt = derive2 { name="rbtt"; version="0.1.0"; sha256="1gbsb0vmqxcl28c5nn0rz95bxrvl7i0b17lq90cj5ahbk6x9jblz"; depends=[data_table]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; @@ -12149,6 +12394,7 @@ in with self; { rcorpora = derive2 { name="rcorpora"; version="2.0.0"; sha256="1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy"; depends=[jsonlite]; }; rcosmo = derive2 { name="rcosmo"; version="1.1.1"; sha256="195cxjgkcgz9qx51hsg9bd2y7c96dk69c8yvy9s2w59jy9iy5i7y"; depends=[cli entropy FITSio geoR mmap nnls Rcpp rgl tibble]; }; rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; }; + rcrimeanalysis = derive2 { name="rcrimeanalysis"; version="0.1.0"; sha256="17s5k0p24vgy34gp213sxy7d7fd3fl8zyhiibszm2z81aknpszz8"; depends=[dplyr forecast ggmap htmltools igraph KernSmooth leaflet lubridate raster rgdal sp]; }; rcrossref = derive2 { name="rcrossref"; version="0.9.2"; sha256="1383xlwy3vj08hhghx5zsy0890zsm402x9hdqzs5x5q7mxkqdwjq"; depends=[bibtex crul dplyr DT jsonlite miniUI plyr R6 shiny stringr xml2]; }; rcrtan = derive2 { name="rcrtan"; version="0.1.1"; sha256="0kcp3gnjmp00i1hsjagpp0dlr6zgpc4y5ihpx93hm4m3fnzcmn7x"; depends=[dplyr magrittr purrrlyr tibble tidyr]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; @@ -12174,33 +12420,34 @@ in with self; { rdist = derive2 { name="rdist"; version="0.0.3"; sha256="1jp3s4293h973dpz0waq9abpd8ibp4gxdyk3bwn7a32zfpk4kjza"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="1.2.1"; sha256="0j67b9mnq2xfbi2hrn1x9vgdv63779d0rcbzndljh37b1x5zlr22"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; }; rdlocrand = derive2 { name="rdlocrand"; version="0.5"; sha256="1dadb3yazk9kn051rswq3568m77x44485l2268ahm0im6bj2i7al"; depends=[AER sandwich]; }; - rdmulti = derive2 { name="rdmulti"; version="0.2"; sha256="1sl677kaq5qr2m9nzxfslwzai7h07mdfqjjzrak2xbpgqa44288z"; depends=[rdrobust]; }; + rdmulti = derive2 { name="rdmulti"; version="0.3"; sha256="0s65zpy4zlqzdg34wq1bf2g0r97iak3fscrik2p83p4ah4gf4raw"; depends=[rdrobust]; }; rdnb = derive2 { name="rdnb"; version="0.1-3"; sha256="0g85masa1a2c26l12i6ck1hdjvm2saqdlqnwb2p29rm9spmc04qg"; depends=[brew httr stringr xml2]; }; rdoc = derive2 { name="rdoc"; version="0.1.0"; sha256="0ac6413jyrr7m25z30n3bpiafsvjx38ik6rrjzsiqxrfp41j6l9x"; depends=[cli crayon prettycode R6]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpla = derive2 { name="rdpla"; version="0.2.0"; sha256="0d32bp68z1agymcmjwnds4fkblhjrcx8i2q6f5b7sl4kdfdbjchf"; depends=[crul data_table hoardr jsonlite tibble]; }; - rdpower = derive2 { name="rdpower"; version="0.3"; sha256="1jdr18xrnws07iczi1f52l3py9fhxgvpina230jyr713hz99hzm3"; depends=[rdrobust]; }; + rdpower = derive2 { name="rdpower"; version="0.4"; sha256="050yy1zwkxniqails24nmmaglcmlx50niqqqw5sgqfyn64yxndk1"; depends=[rdrobust]; }; rdrobust = derive2 { name="rdrobust"; version="0.99.4"; sha256="0ykz9lgkr95l6h7jk9k8k0yv26hd4iyvgr9j298l388ry9w1ph9w"; depends=[]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="0.4.0"; sha256="19ca618hymvpk5byrrglc6iidsgm6wn43fypspssa7b3r1c4xhdc"; depends=[crul curl data_table oai solrium tibble xml2]; }; rdtLite = derive2 { name="rdtLite"; version="1.2"; sha256="1g4y8rsq7hy8kwradlmkmf4r309128mb3mfdyxjb24acazmaybyl"; depends=[curl digest ggplot2 gtools jsonlite knitr rmarkdown sessioninfo stringi XML]; }; - rdwd = derive2 { name="rdwd"; version="1.1.0"; sha256="1zx00bbfh0nqycs3h2f05kridikxqq59xaqkvbxv4rm827y8356x"; depends=[berryFunctions pbapply]; }; + rdwd = derive2 { name="rdwd"; version="1.2.0"; sha256="1vcw5pcvcw1rx6dwwwh9j9g2pb1m81g812abd5h8zq5n7plkd2jk"; depends=[berryFunctions pbapply]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; }; - reReg = derive2 { name="reReg"; version="1.1.6"; sha256="198vgf3294if9zmvl54pgx6ram63pswpjnh44fy7n60g8nza44bb"; depends=[BB dplyr ggplot2 MASS nleqslv plyr purrr SQUAREM survival tibble tidyr]; }; + reReg = derive2 { name="reReg"; version="1.2.1"; sha256="0nfi02wlmb1n8j134qgv3p03z2j200kkrwhvd5i17ybhzpwfndri"; depends=[BB ggplot2 MASS nleqslv reda scam SQUAREM survival]; }; reactR = derive2 { name="reactR"; version="0.4.1"; sha256="0fzx0qy9s366gd81xiz36k3v4d9sdsrrf3m5azlghvbvq5h42wxv"; depends=[htmltools]; }; + reactable = derive2 { name="reactable"; version="0.1.0"; sha256="00ydsx8g27a40qwnkp593dd9pn62r32riry9ayhv3nzqa6mwzb4d"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; reactlog = derive2 { name="reactlog"; version="1.0.0"; sha256="1pajxd9k208s06sava2gqip22pzwlyslnfvkbkfw47mp4wb7zmk9"; depends=[jsonlite]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; read_gb = derive2 { name="read.gb"; version="1.6"; sha256="17py6al9cwq4jmab7k2164f7hi8943gi8a50d8zpn1xms9l2cnld"; depends=[]; }; readABF = derive2 { name="readABF"; version="1.0.1"; sha256="0w85v8dl337lsyfad3hxwavma1gnhi4wyszdj8npaz37y12nk2gy"; depends=[]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; readHAC = derive2 { name="readHAC"; version="1.0"; sha256="0z80ai6xfswwgdfh83l9sq279c97n0wz25bk2l7xfb6w0sndzq53"; depends=[]; }; - readJDX = derive2 { name="readJDX"; version="0.3.250"; sha256="0h7yfc0y4b67rhh949zknqyjx0jknsld1099y9x563a5lhzwrchv"; depends=[stringr]; }; + readJDX = derive2 { name="readJDX"; version="0.4.29"; sha256="0hy8lcy8n2qf17b5q7q67mmv23m155nd9dcnlpgvzcr6hsify78q"; depends=[stringr]; }; readMLData = derive2 { name="readMLData"; version="0.9-7"; sha256="0l752j1jq37j9pdcsbmcb23b5l8fkfsbisfr3yjy3q4rxsphc7k6"; depends=[XML]; }; readMzXmlData = derive2 { name="readMzXmlData"; version="2.8.1"; sha256="03lnhajj75i3imy95n2npr5qpm4birbli922kphj0w3458nq8g8w"; depends=[base64enc digest XML]; }; readODS = derive2 { name="readODS"; version="1.6.7"; sha256="1nvkhjv3i6l7d15v2abxg4141hrgv2jmc4agxi2d0wv6j1fc1ya1"; depends=[cellranger readr stringi xml2]; }; readOffice = derive2 { name="readOffice"; version="0.2.2"; sha256="0dg7fwxdl41nrjqnxvh9rpz0la99iid0wy51gncjwrh3s85fj2ks"; depends=[magrittr purrr rvest xml2]; }; - readabs = derive2 { name="readabs"; version="0.4.1"; sha256="1kjvvasc780icfx8wn456y9fsa1rllg09vbsy6ym4cifnws74100"; depends=[curl dplyr purrr readr readxl rsdmx stringr tibble tidyr XML]; }; + readabs = derive2 { name="readabs"; version="0.4.2"; sha256="08lkddcfvb3j4nlkbnqwxb7w7a95hklfgky6jhlk119r1czb5ycd"; depends=[curl dplyr purrr readr readxl rsdmx stringr tibble tidyr XML]; }; readbitmap = derive2 { name="readbitmap"; version="0.1.5"; sha256="14825906l326w59g6apy00j55jg3h5kx2r6s031f4gdkbrc7szbk"; depends=[bmp jpeg png tiff]; }; readbulk = derive2 { name="readbulk"; version="1.1.2"; sha256="0341sp9jqqci62zx6my4r50dwrysgjppjasx2lf1dj8w5bv559rd"; depends=[jsonlite plyr]; }; reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; @@ -12212,11 +12459,12 @@ in with self; { readsdmx = derive2 { name="readsdmx"; version="0.3.0"; sha256="188yzkjblbjly032312w0fazj7k7j4ynqfc69xpblnw4gs708sx0"; depends=[Rcpp]; }; readstata13 = derive2 { name="readstata13"; version="0.9.2"; sha256="02mqwpzn7n3pqjxivnd1vlfc47xkyiywfz594x0f6vd2dym8rdwd"; depends=[Rcpp]; }; readtext = derive2 { name="readtext"; version="0.75"; sha256="0xbl4q3y4kzigr6rgqb04sq1xqddfzqivkjmbd0v5sfammrhla8n"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; + readthat = derive2 { name="readthat"; version="0.0.1"; sha256="04vnpvfa8in3gxi6nv3si59hr8hj17wq3a5n8rnpiaczg46qr1dr"; depends=[curl Rcpp]; }; readwritesqlite = derive2 { name="readwritesqlite"; version="0.0.2"; sha256="064imgjl197avdsjhqvlg9yzgsp4p4yisvk62l6arcnkixwlz086"; depends=[checkr DBI dttr2 err hms RSQLite sf tibble units]; }; readxl = derive2 { name="readxl"; version="1.3.1"; sha256="15mambxr8c7k2ikdfsl1w3vxvm54dsnk0cl1qvks6iig7rql3d14"; depends=[cellranger progress Rcpp tibble]; }; readxlsb = derive2 { name="readxlsb"; version="0.1.2"; sha256="0vm1hl8rjmcly6wkq06x9q5yswcdxasdc66xgpvhvw8mf0q6rlkd"; depends=[cellranger Rcpp xml2]; }; reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; - rebird = derive2 { name="rebird"; version="1.0.0"; sha256="0gp8afj6y3vss2b11v0fqyc3ai67kilicr4fnk5zghljfvbxsxm8"; depends=[assertthat dplyr httr jsonlite]; }; + rebird = derive2 { name="rebird"; version="1.1.0"; sha256="0l1wignhs4hsy0yshr9gh9mwy8h794injkl5f7flkl1m4c39rz8w"; depends=[assertthat dplyr httr jsonlite]; }; rebmix = derive2 { name="rebmix"; version="2.10.3"; sha256="0yhazicibq8h2d7ldv59isapc6f68psawa3vrs1fdzwkrraj6893"; depends=[mvtnorm]; }; rebus = derive2 { name="rebus"; version="0.1-3"; sha256="0ms3dm6g0fq3jycpgjl7q7kyljxc97cczy2jj0lyviwmipdgjg9d"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; rebus_base = derive2 { name="rebus.base"; version="0.0-3"; sha256="1n2khszcya9k6379bdkq47xi2nw9jngiwj7z8a14wfswqydczv6y"; depends=[]; }; @@ -12237,21 +12485,19 @@ in with self; { reconstructr = derive2 { name="reconstructr"; version="2.0.2"; sha256="0pzpd2l1b6y1b1lnd95lpc5s8niz7p56vkmxgyi6g6b25vh9c2vi"; depends=[openssl Rcpp]; }; recorder = derive2 { name="recorder"; version="0.8.2"; sha256="1j3fqqp5vi8z3hxqgb887v9r8x0cl5jikiyx3c7arwna7k89215a"; depends=[crayon data_table]; }; recosystem = derive2 { name="recosystem"; version="0.4.2"; sha256="1bn6l23gqmfpr6w60ph7zgv53vy3vnq9zdy5x0a8n1yp6b0lw48x"; depends=[Rcpp RcppProgress]; }; - recurse = derive2 { name="recurse"; version="1.1.0"; sha256="1zgzzhbvdzqgmgzj43yvpyc7ahbkn96l5wyr1iqpnn3ha78fy0p3"; depends=[Rcpp]; }; red = derive2 { name="red"; version="1.4.0"; sha256="1z8ja8qbwgpbmy4ira9q6x482nw5rm4bksm82y0vc4gwpdxls5z3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.1"; sha256="0bd1jzjip6p449m9ysi4kybxqljh2wj8z9mrgyk1cy08bjivd1cd"; depends=[imager]; }; - reda = derive2 { name="reda"; version="0.4.1"; sha256="0aq6c2h694kdmjis12g4nxq5hdlzsi42nbnpzq7wic305l5r7nxl"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; + reda = derive2 { name="reda"; version="0.5.0"; sha256="05lbhamd8z0bhc7cvpd24nmgsc5lfzidjynbi0dzbvkn2gphpdzs"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; redcapAPI = derive2 { name="redcapAPI"; version="2.2"; sha256="0bszw9px7ddcwnc1p3zpd8426mwym5369hglz3qm5x92va1j4036"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; redist = derive2 { name="redist"; version="1.3-3"; sha256="18asjam8hvayvnfysyjzbazjn27ds7163qhdq0p9aqlx03v89aa9"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; - redland = derive2 { name="redland"; version="1.0.17-10"; sha256="0k28896jsxy1qxnn6iyx3xxasq4y171xfjragqkj568nn9lmzfi8"; depends=[roxygen2]; }; + redland = derive2 { name="redland"; version="1.0.17-11"; sha256="1xbzz6iv4yal1gwplnb9d4z0xzrv25hnqmr6ima2aq9mirwr1l5b"; depends=[roxygen2]; }; redlistr = derive2 { name="redlistr"; version="1.0.3"; sha256="003jxfmj1gryw77vnrvaxmpvjbshlq53wgcrj02mcywfcqzg4jcr"; depends=[plyr raster rgeos sp]; }; redshiftTools = derive2 { name="redshiftTools"; version="1.0.1"; sha256="0rg9s9i7cdy2qm45bpm50d7859pqx1kmk4m8gpazkp0kgr7alb7l"; depends=[aws_s3 DBI progress purrr]; }; redux = derive2 { name="redux"; version="1.1.0"; sha256="0a551w7fph338mqzxda6y21lsad19dway7w18jw9cv1rgvcp9nvc"; depends=[R6 storr]; }; ref_ICAR = derive2 { name="ref.ICAR"; version="1.0"; sha256="0k6czsbjclgmi7vp5hl50jghkzm573s50993iz3dcv55mv662251"; depends=[coda MCMCglmm mvtnorm Rdpack rgdal spdep]; }; refGenome = derive2 { name="refGenome"; version="1.7.7"; sha256="1za89bn3am1zgvm641qi1ab6kaqpll4rb9p9f1sjwvcgqq6065g5"; depends=[DBI doBy RSQLite]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.1.1"; sha256="04199nxh216msaghkp66zsi96h76a7c42ldml0fm66v2vamcslg8"; depends=[boot car extremevalues outliers]; }; - refimpact = derive2 { name="refimpact"; version="1.0.0"; sha256="0qifqhar2pv81npsxl2pj713vgldyap7y79fq20jpk7qigzf9573"; depends=[checkmate curl httr jsonlite tibble xml2]; }; refinr = derive2 { name="refinr"; version="0.3.1"; sha256="0q76sr050pg3ahwzcxj08mjig0k2jq8yh7nv6d914pwg3dhq05sn"; depends=[Rcpp stringdist stringi]; }; refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; }; @@ -12271,7 +12517,6 @@ in with self; { regress = derive2 { name="regress"; version="1.3-15"; sha256="1cgr0r49cmr8nzs2lr2cm8lli1i8azyas0lbnf1681kyab15c0r7"; depends=[]; }; regressoR = derive2 { name="regressoR"; version="1.1.8"; sha256="1a8whcr32sjv6lncch8y1n7xs44djm3nx90lpvh8z8r5ggc8bw21"; depends=[colourpicker corrplot dplyr DT e1071 flexdashboard gbm ggplot2 glmnet htmltools kknn neuralnet pls randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets xgboost zip]; }; regrrr = derive2 { name="regrrr"; version="0.1.0"; sha256="0h9vag1ypf5ycvz5fbfvw4nh4l8dgn2kmsgzq9kmn7hw2qsjwbbl"; depends=[dplyr ggplot2 magrittr MuMIn purrr rlang robustbase scales spatstat stringr tidyr usdm]; }; - regsel = derive2 { name="regsel"; version="0.2"; sha256="0wwwpawqsqimaldy0zxnqsy23nwp30ypa5dnrnndwhbs4qz99c9w"; depends=[elasticnet glmnet]; }; regsem = derive2 { name="regsem"; version="1.3.9"; sha256="1klml4bp76mplipxaca7fk653cjxgdmmiciksxgiglxkzmf2bdps"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; @@ -12291,8 +12536,7 @@ in with self; { relabeLoadings = derive2 { name="relabeLoadings"; version="1.0"; sha256="16gxdrhkaaa33hypnsacn4vd1g3lbqdl3j8p8va54v777c561g81"; depends=[]; }; relaimpo = derive2 { name="relaimpo"; version="2.2-3"; sha256="0pbffalyhmfigyynkl6il60dyyf2aw1i71sncwrqcp18qgx4bxq9"; depends=[boot corpcor MASS mitools survey]; }; relatable = derive2 { name="relatable"; version="1.0.0"; sha256="0147gin6dn76gg7gassar64f0w2gny1sh0k60v7914qhb4sj4s7i"; depends=[compare]; }; - relations = derive2 { name="relations"; version="0.6-8"; sha256="0zld95ak07g3gqgjq80p18sww2ib5xg45idrvhxjvn19wddy87vz"; depends=[cluster sets slam]; }; - relaxnet = derive2 { name="relaxnet"; version="0.3-2"; sha256="1l83rk7r4vkcxbfljmibzm8lzpx0vf406hv4h5cy9x0k3rz2bfh0"; depends=[glmnet]; }; + relations = derive2 { name="relations"; version="0.6-9"; sha256="0vq4wawj9k3a9n70i7y6c7k2jylmyczsi6iqssydn5z5h48m15fj"; depends=[cluster sets slam]; }; relaxo = derive2 { name="relaxo"; version="0.1-2"; sha256="1rzmq7q3j271s6qwwrmwidv0vxcjpgjhyiqgr6fkczkai2lbnd8x"; depends=[lars]; }; reldist = derive2 { name="reldist"; version="1.6-6"; sha256="09vips7spcz0fahrpy0bl15hk43zgnq74h189hmygyi41l95aywa"; depends=[Hmisc mgcv]; }; relen = derive2 { name="relen"; version="1.0.1"; sha256="0br7c3j30a1yc61pyinmk5lvk8zw9rivd0z2096g6crgmbzix8ml"; depends=[]; }; @@ -12309,15 +12553,17 @@ in with self; { remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; remotes = derive2 { name="remotes"; version="2.1.0"; sha256="19v8dmnk9l4i9m64p7zgmj7y1vhnnwhi5kyn0k5d034zzkvchi49"; depends=[]; }; + remss = derive2 { name="remss"; version="1.0.0"; sha256="0dl7iqg65qgafq7s1srcymqzvplkpzplpn6g68lb1mqirqzvgpqw"; depends=[survival]; }; renpow = derive2 { name="renpow"; version="0.1-1"; sha256="0kbfpzr17fvf5zzxpzdhvfmrqmlkba2w3rzxl5q5ac1w3h75gfhc"; depends=[]; }; rentrez = derive2 { name="rentrez"; version="1.2.2"; sha256="0ghrvh1czf2kbz7p5fh5c20wiwppg6x6fdns247fvlh6zmjl5jz5"; depends=[httr jsonlite XML]; }; + renv = derive2 { name="renv"; version="0.8.3"; sha256="0034jlaq7z40q3hcpkjlaff37dpn46kvxvzw4scbwlw4x9q8sx9j"; depends=[]; }; repeated = derive2 { name="repeated"; version="1.1.2"; sha256="19kcsj96i1zpnwfan3gz5vrzc2gqlah0wrdr9vb4vvacz45wcdfq"; depends=[rmutil]; }; repec = derive2 { name="repec"; version="0.1.0"; sha256="0alr9fbmfxmnnnn1qymy65crcycynwz435jj0vangbb4p0qhv8pm"; depends=[jsonlite]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; - replicateBE = derive2 { name="replicateBE"; version="1.0.11"; sha256="0j958jzkw67yjjmfxh9y42bdv0z3dyki6qcxvacj4c6qmb26b0jq"; depends=[lmerTest nlme pbkrtest PowerTOST readxl]; }; + replicateBE = derive2 { name="replicateBE"; version="1.0.12"; sha256="1vvl88vak56s2q96crr34q8lpwp0davpqysvzxrs5y1sswb6xb3b"; depends=[lmerTest nlme pbkrtest PowerTOST readxl]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; - replyr = derive2 { name="replyr"; version="1.0.4"; sha256="1vz2lw2b587c7yc2l9x2rx9wdb2l3nfr3cjv1jy0h4y9k5rmzfpg"; depends=[DBI dbplyr dplyr rlang wrapr]; }; + replyr = derive2 { name="replyr"; version="1.0.5"; sha256="0k77rz0vwgyhdgvry3j2i290w1378fjjfkfrykb0b6wjs7pq4q4b"; depends=[DBI dbplyr dplyr rlang wrapr]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; repo = derive2 { name="repo"; version="2.1.3"; sha256="1g72zvj2mg8cxfy1w3d46lkk4hayad64ns5w1y43731whzraxk95"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -12332,14 +12578,14 @@ in with self; { represtools = derive2 { name="represtools"; version="0.1.3"; sha256="00hnvzkkcl9d3k115i5l9gs0wah5d11amn7q62m1j158lkqlcfza"; depends=[whisker]; }; reprex = derive2 { name="reprex"; version="0.3.0"; sha256="0v7vxzs8alwz8y1cjicpimp5yimf1g9gb8x5wy3zhvrz6kk2lg10"; depends=[callr clipr fs rlang rmarkdown whisker withr]; }; reproducer = derive2 { name="reproducer"; version="0.3.0"; sha256="0z0gkikr5219wb20hndqlflxar1mn3638zn2095ja0b2d1cn40nk"; depends=[dplyr GetoptLong ggplot2 gridExtra httr jsonlite lme4 magrittr MASS metafor openxlsx readr reshape stringr tibble tidyr xtable]; }; - reproducible = derive2 { name="reproducible"; version="0.2.10"; sha256="08k9kly2fhim2zv7dv8sd79wxpaqaf1ssb0jyvn2ci9hb1rvv7ms"; depends=[archivist backports crayon data_table digest dplyr fastdigest fasterize fpCompare gdalUtils git2r googledrive httr magrittr memoise quickPlot R_utils raster RCurl remotes rgdal rgeos rlang sf sp testthat versions]; }; + reproducible = derive2 { name="reproducible"; version="0.2.11"; sha256="08pjmhhcgcrnrr8w6sdc3phz2ymp2b7gml0848f384blqkg9wavj"; depends=[archivist backports crayon data_table digest dplyr fastdigest fasterize fpCompare gdalUtils git2r googledrive httr magrittr memoise quickPlot R_utils raster RCurl remotes rgdal rgeos rlang sf sp testthat versions]; }; reproj = derive2 { name="reproj"; version="0.4.0"; sha256="0liwv4sgxdm42vyykjyc3jihcxk3b5q0d7cwgai8349nn1ah0wdh"; depends=[proj4 tibble]; }; repurrrsive = derive2 { name="repurrrsive"; version="1.0.0"; sha256="1nmy88h2bfv2bad282kbrmnkjx9d8klgzv4mm8nspm049s09ydmz"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.3"; sha256="0dly09h8dpjlmvrd1wfg1gqcqhm03ax97qr0nd1p0fg9y0pdapya"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; rerddap = derive2 { name="rerddap"; version="0.6.5"; sha256="1pmpf9jdgp71ganzslwlp5qhkxhy7snaxgbrrym7swx6v2jnwhmv"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; - rerddapXtracto = derive2 { name="rerddapXtracto"; version="0.4.4"; sha256="03sd24hbm9s3q014ys77avjbqpm9mpl8lmaw9r6bwbq81jw2ak9c"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; + rerddapXtracto = derive2 { name="rerddapXtracto"; version="0.4.5"; sha256="1c185qckr931a0rqr5l1c4vpcqy1ll8387ssb0lfrwbah41j11sj"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; rerf = derive2 { name="rerf"; version="2.0.4"; sha256="0ykgxdmkqapdpk5zwi8h1cbsvjv6jpscqpr5cjmdzdan22m09l6k"; depends=[dummies mclust Rcpp RcppArmadillo RcppZiggurat]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; resampledata = derive2 { name="resampledata"; version="0.3.1"; sha256="1nxjqvxxvycccmh1n7lpc4k8zmwnciicfr5rzfid1icij5fzw3ak"; depends=[]; }; @@ -12350,13 +12596,13 @@ in with self; { reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; respirometry = derive2 { name="respirometry"; version="1.0.1"; sha256="1syc2gf3jri90pi0qmrhwg472rn6dx8abpr9yb8jb5q1f1qs07p0"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; - restatapi = derive2 { name="restatapi"; version="0.3.6"; sha256="1g82vnka0nq98rxjjx6ph8dsd7dgarq4fwsf4c8jfsna6r1prrcx"; depends=[data_table rjson rsdmx xml2]; }; + restatapi = derive2 { name="restatapi"; version="0.4.0"; sha256="0syacz5fy0hcqfzj0x0ymkdwb61j9qn9s4maijywpd3yhrk2ijjs"; depends=[data_table rjson rsdmx xml2]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; }; restorepoint = derive2 { name="restorepoint"; version="0.2"; sha256="0pjp5dvycvfg75hhj8lrr2lrjn6n6bqj0ziwyd87lyi15b9j8w4s"; depends=[]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; - restriktor = derive2 { name="restriktor"; version="0.2-15"; sha256="1m3ng5cmkiim5gwi3v18d0987ghw1pkxxyw37pyz02iwlhzdj06s"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + restriktor = derive2 { name="restriktor"; version="0.2-250"; sha256="0ks6fg76y1h7mgdxgl0w895ykwp3dri6if2va08aj4sqxcgg1rpa"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; reticulate = derive2 { name="reticulate"; version="1.13"; sha256="1qwxh7zq9igl7dxl5g5qjbvv0mlac3w80djnkm0w8rxnaval3gmd"; depends=[jsonlite Matrix Rcpp]; }; @@ -12366,7 +12612,7 @@ in with self; { retrodesign = derive2 { name="retrodesign"; version="0.1.0"; sha256="173jrpzasimplv8vbm8gzpl8aibnsjkgvhz1hd75is0b2l8gnbxy"; depends=[]; }; reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; }; - revdbayes = derive2 { name="revdbayes"; version="1.3.4"; sha256="0aqj2hvav3k4b1xiaz2adrqjdm87074a14p58ddclywq609cy2zk"; depends=[bayesplot Rcpp RcppArmadillo rust]; }; + revdbayes = derive2 { name="revdbayes"; version="1.3.6"; sha256="15nrmnl3g4l8yn6x1xvbfjn4fznryvgkvaqyxjr929v05rrf3fl0"; depends=[bayesplot Rcpp RcppArmadillo rust]; }; revealedPrefs = derive2 { name="revealedPrefs"; version="0.4.1"; sha256="1m8y1mj39bnf9q0n9mi0ashvb79lksx5dfkxb04qj2h5kkyxg49g"; depends=[pso Rcpp RcppArmadillo]; }; revealjs = derive2 { name="revealjs"; version="0.9"; sha256="0h4csxrcl1rzmj3g01nf0mr990zc8swrf4jvmxwqsyzx9v2cqbnc"; depends=[rmarkdown]; }; revengc = derive2 { name="revengc"; version="1.0.4"; sha256="1nipkff9zmkdi509qfdrmvsq5c643xd7bzzw5bchxd8nmfqb412i"; depends=[dplyr mipfp stringr truncdist]; }; @@ -12375,7 +12621,7 @@ in with self; { revtools = derive2 { name="revtools"; version="0.4.0"; sha256="138k9pcdv1gxfh52wlxavy6dinwqigrnckwka8bg3rwhdw0j8cky"; depends=[ade4 modeltools NLP plotly shiny shinydashboard SnowballC stringdist tm topicmodels viridisLite]; }; reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; }; rex = derive2 { name="rex"; version="1.1.2"; sha256="0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"; depends=[lazyeval magrittr]; }; - rexpokit = derive2 { name="rexpokit"; version="0.26.6.4"; sha256="0flqf57zsf0a70yrkgp9jfq3bmj36wyfzwldpkmfvw3qvfhddysw"; depends=[Rcpp]; }; + rexpokit = derive2 { name="rexpokit"; version="0.26.6.6"; sha256="13dxra3s68i499g21z9i93mbn6n8s4xay5zmvslafaccbq3q1ray"; depends=[Rcpp]; }; rfPermute = derive2 { name="rfPermute"; version="2.1.7"; sha256="0dhgxm9b2djgadr1wnwgd0gbqv7751y0ln4jis32p0qmwi30v76d"; depends=[abind dplyr ggplot2 gridExtra magrittr plyr randomForest reshape2 rlang scales swfscMisc tibble tidyr]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-5"; sha256="1anwvmxn3xrc1aqxl75rzlk4wby8l54rmkp0bgi8dgbz2l223xr0"; depends=[cluster randomForest]; }; rfVarImpOOB = derive2 { name="rfVarImpOOB"; version="1.0"; sha256="1341bicd65qw3pz1j8d6c9baj9d6s70ljdaaf87xvx8pjnajrfsw"; depends=[binaryLogic dplyr ggplot2 ggpubr magrittr prob randomForest titanic]; }; @@ -12394,17 +12640,17 @@ in with self; { rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rfviz = derive2 { name="rfviz"; version="1.0.0"; sha256="0rzyy7r2ybqjnp1g5bbkxydpa93h8q4r71kdaj77r475m2i4kb6b"; depends=[loon randomForest]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; - rgbif = derive2 { name="rgbif"; version="1.3.0"; sha256="1lamyylaj51vn693964xhgmx2fyrnlc4yljh63cb74gx9qjc9yga"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; - rgdal = derive2 { name="rgdal"; version="1.4-6"; sha256="0lj1dax56dxxsj1hindxcvgz169p9dxd0y4wjypbyr01nja8rz4d"; depends=[sp]; }; + rgbif = derive2 { name="rgbif"; version="1.4.0"; sha256="00ik9aab13zq6n5r7sa8199nczrxb77xcf9j5bn2v8x0b7kyj4l9"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; + rgdal = derive2 { name="rgdal"; version="1.4-8"; sha256="1jd691amf3ghznq5im15gvhl6v6k25klpl75m4ngrqf9xlxaa3as"; depends=[sp]; }; rgdax = derive2 { name="rgdax"; version="1.0.0"; sha256="16ph6n1nyl2v2w51ih6wzkpw0j0hfa3f60q1g6p9zis59j0rh7d9"; depends=[digest httr jsonlite RCurl]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-3.0"; sha256="0p93wf6ghgz2nifxbscb6bhahh5jd2ba7nh1c2mb6fmbxnsi3swv"; depends=[]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; }; rgeopat2 = derive2 { name="rgeopat2"; version="0.2.6"; sha256="04r8q3mig7sp38f3m9g20xlb0h046c04hhrzg4n06b5wkn7298s5"; depends=[readr sf stringr]; }; + rgeoprofile = derive2 { name="rgeoprofile"; version="0.1.0"; sha256="1s72l7gl370gfcwdhv1qqsyiq8qb530yi1dn4frslf6ay00yash9"; depends=[aspace geosphere leaflet pals RANN_L1 raster sp splancs]; }; rgeos = derive2 { name="rgeos"; version="0.5-2"; sha256="0ajrrxfwfp184c6rnby3dq54hzp3rrx3px72dn7gbdn6c4li2bqz"; depends=[sp]; }; rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; }; rggobi = derive2 { name="rggobi"; version="2.1.22"; sha256="1g7k4xais9xkjlbvrkadr5d6c5rw4jp9c0gljhm71pa1fc9fcqff"; depends=[RGtk2]; }; - rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; }; rgl = derive2 { name="rgl"; version="0.100.30"; sha256="0rzqzskcwf2ah4yr62x5rjwf7yh90d43h39gk7jmfc5lc08zaxc5"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; rglobi = derive2 { name="rglobi"; version="0.2.20"; sha256="0fygxl5bfkkl5d2wadpbk5xg0y6kab4c99mliwlzvl9d3mqpnpsp"; depends=[curl RCurl readr rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; @@ -12414,17 +12660,17 @@ in with self; { rgsp = derive2 { name="rgsp"; version="0.2.0"; sha256="1fk0k479srfr0f4a5abyzcrzwy9hr1v5xf0jgs36fbim9bh7njlc"; depends=[dplyr magrittr tibble]; }; rgw = derive2 { name="rgw"; version="0.1.0"; sha256="12f7bsfg24cld9y47jyqxswgc1bk4adbhhdpycapinbcfhyzc91p"; depends=[]; }; rhandsontable = derive2 { name="rhandsontable"; version="0.3.7"; sha256="1y6dlpzid5apjx0gphkym7gq3lhwp0bxan8ca274pg170xyb33h8"; depends=[htmlwidgets jsonlite magrittr]; }; - rhierbaps = derive2 { name="rhierbaps"; version="1.1.2"; sha256="0xi52wx4vswh7i4flg6y2pcrrbx6syk6pw43gkjccddwb4rf87sq"; depends=[ape ggplot2 gmp matrixStats purrr]; }; rhli = derive2 { name="rhli"; version="0.0.2"; sha256="1mb6bizqkg7zd8nc5a81fw7d0y0vcv6zh6y28k9vikqmc5l1n21q"; depends=[]; }; rhmc = derive2 { name="rhmc"; version="1.0.0"; sha256="1m79f1hx404y0k8lk3n6jnzhr6wwrk83xiym68sq1zvj0wjqiqmw"; depends=[]; }; rhmmer = derive2 { name="rhmmer"; version="0.1.0"; sha256="0875b29i8rl9iypxp7vw514avq0ac4abdlfq3861cdd3kgycw8jh"; depends=[dplyr magrittr readr rlang tidyr]; }; rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; }; - rhoR = derive2 { name="rhoR"; version="1.2.1.1"; sha256="0jinacyaibf4yk5dizkyxaz0bi0lx8f5av0gzqzs15870vb8ybil"; depends=[]; }; + rhoR = derive2 { name="rhoR"; version="1.3.0.0"; sha256="1nmnrib3dlsf2cswnx19l63449cv4yl6nbq5ih5j7m9ygxr8b8s8"; depends=[Rcpp RcppArmadillo]; }; rhosp = derive2 { name="rhosp"; version="1.10"; sha256="1k0rb4fchjlzinky6ysdvyk0xjsx5986aqwn3yc6s7m3v7y9wb9m"; depends=[]; }; rhub = derive2 { name="rhub"; version="1.1.1"; sha256="05b4phrny85fshismspjbaz1h0klg1fpy4b309si94pnqffxaqx6"; depends=[assertthat callr cli crayon desc digest httr jsonlite parsedate pillar prettyunits processx R6 rappdirs rcmdcheck rematch tibble uuid whoami withr]; }; rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; ri2 = derive2 { name="ri2"; version="0.1.2"; sha256="0z6mbhrda7fh7a4y2kx3mf1zc1p0k4d76phw3187w50kwvkpb737"; depends=[estimatr generics ggplot2 pbapply randomizr]; }; + ribd = derive2 { name="ribd"; version="1.0.0"; sha256="1r3w8zfihs5i1al0g136319zaj2dr0x52s3spxrcvd0irq9r4v8b"; depends=[glue kinship2 pedtools slam]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; ridge = derive2 { name="ridge"; version="2.4"; sha256="18a16653k850sfxw9rmk4spy44hn93i97b2a0jfx41qh43hmkgqy"; depends=[]; }; @@ -12441,15 +12687,15 @@ in with self; { rio = derive2 { name="rio"; version="0.5.16"; sha256="0rfl56fdawlhc98451a9lcb6a6m56kw0i7dvd5hx58z025d8vsyk"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; rioja = derive2 { name="rioja"; version="0.9-21"; sha256="01vc7zfw13zdri0rx93adx86gprzcmw9d454848ach95hdkwipk5"; depends=[mgcv vegan]; }; rise = derive2 { name="rise"; version="1.0.4"; sha256="12r7mbaxp9pjypbpjxlsbqg7spw80gjgm2w0lsvgvclffc50a6ni"; depends=[dplyr ggplot2]; }; - riskParityPortfolio = derive2 { name="riskParityPortfolio"; version="0.2.0"; sha256="1blswxlxf5iyrjixcabwmn1c5a3kkpyn57pw89a0k36cijry30pk"; depends=[alabama Matrix nloptr quadprog Rcpp RcppEigen]; }; + riskParityPortfolio = derive2 { name="riskParityPortfolio"; version="0.2.1"; sha256="0l51spflm7wwwz5yrkw1i5534d1840wyyh2w3mz8apaxac76l0xz"; depends=[alabama Matrix nloptr quadprog Rcpp RcppEigen]; }; riskPredictClustData = derive2 { name="riskPredictClustData"; version="0.2.6"; sha256="0mvy9299pg374gvvqs9lmj2j0f3bzyy279kjpz7jq35hkgz5wif3"; depends=[gee Hmisc MASS mvtnorm]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; - riskRegression = derive2 { name="riskRegression"; version="2019.01.29"; sha256="0nvp42j2bzqmiffni2yxg7170z1hl9xli614v6ji65nhy27gnr85"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava plotrix prodlim ranger Rcpp RcppArmadillo rms survival timereg]; }; + riskRegression = derive2 { name="riskRegression"; version="2019.11.03"; sha256="15mz89cdzd6pjrlf61qs6vlcwx10rqxmz8ggpynyclhm9327skbb"; depends=[cmprsk data_table doParallel foreach ggplot2 lattice lava plotrix prodlim ranger Rcpp RcppArmadillo rms survival timereg]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; riskclustr = derive2 { name="riskclustr"; version="0.2"; sha256="0j5gcm9a57yrg5ppqmacdjr16b9d8rwqkhq1mawy1fjpf18d2max"; depends=[aod gtools Matrix mlogit stringr]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; riskyr = derive2 { name="riskyr"; version="0.2.0"; sha256="0zq5qybqisbh9k7i57s8yw9xcm7yckcjk17h4ybcx4p8788gg5m3"; depends=[]; }; - ritis = derive2 { name="ritis"; version="0.7.6"; sha256="1a1q44dmagzf4k67pxa5x0s5s5jx9kpqg4s193c8r3m7kk3xwna6"; depends=[crul data_table jsonlite solrium tibble]; }; + ritis = derive2 { name="ritis"; version="0.8.0"; sha256="1ggcchavhxcd3pawcf631ca8w1y4v0ygm1hflvkmzhk4k9ci3g13"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-5"; sha256="0n19jlrs12iysq45xyi3zvghkircg0ww5vbsfpnqkw5b22zsv30s"; depends=[MASS quantreg rrcov]; }; riverdist = derive2 { name="riverdist"; version="0.15.0"; sha256="145mvqnhv12dcvss54wdycgb3wwk95phl4kx5z0jnh3kmm1zsdl4"; depends=[rgdal sp]; }; rivernet = derive2 { name="rivernet"; version="1.2"; sha256="0lvl7m1y779g7jsbbc2gh1h6giy1m293j0ky9759c0w17fm454fd"; depends=[]; }; @@ -12457,7 +12703,7 @@ in with self; { rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; rivr = derive2 { name="rivr"; version="1.2-1"; sha256="17kh5kin2id8imarvwkjikrmz266x2ldja6b7xpj34s35dzap682"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; - rjags = derive2 { name="rjags"; version="4-9"; sha256="1vrmxxfnia2mkmfkp5yaq5qrlh4xg3ggab6fnj14mrp1231wb91a"; depends=[coda]; }; + rjags = derive2 { name="rjags"; version="4-10"; sha256="1nhaim84ww8fd6m8xlpmngqcnp2qpql29ahc38366fxja3ghngmx"; depends=[coda]; }; rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rjdqa = derive2 { name="rjdqa"; version="0.1.0"; sha256="07qvvy3i0ak7p717wf68gx8d1m9l4lhibf0ynmc0jny58i56fiw8"; depends=[plotrix RJDemetra]; }; rje = derive2 { name="rje"; version="1.10.10"; sha256="1i0v8v5sdc9dwwljgnv3365sxyshp9dqbmamr3fa5gmhsjly3zs2"; depends=[knitr]; }; @@ -12471,19 +12717,21 @@ in with self; { rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.4.0"; sha256="038mmbmklw17ncgz53vrdx2506c1jj6di3y165bbx2sl2yia8j4p"; depends=[]; }; + rlang = derive2 { name="rlang"; version="0.4.2"; sha256="0fczcp17kaz3s4p0nd4126bppwl20vpxfybhsndpcky9h75wklgv"; depends=[]; }; rlas = derive2 { name="rlas"; version="1.3.4"; sha256="0ccdbg634ibdjh1c7bri4l6achfrb4agy4iilr4z1pc1yzgsnk6r"; depends=[BH data_table Rcpp]; }; + rlc = derive2 { name="rlc"; version="0.1.0"; sha256="1f0ibhnj43aalks7z9w2sbnqwccjvff1lbkkykr5fqllybnsn05r"; depends=[httpuv hwriter jrc jsonlite plyr stringr]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; - rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; }; + rlecuyer = derive2 { name="rlecuyer"; version="0.3-5"; sha256="09mniai7v8gapr6hd3zm8sm3vi1zcyhgym389904ykb2yx7l68s7"; depends=[]; }; rless = derive2 { name="rless"; version="0.1.1"; sha256="0ham8kf2hbswrcnc5i5b3svywdwq3kwp9n66n4k9sllahl4x9jdn"; depends=[V8]; }; - rlfsm = derive2 { name="rlfsm"; version="0.3.1"; sha256="1pqhm25xc1i7lx99vapflcdp7i82sw3zd20avx3p71j60wyngdx0"; depends=[doParallel foreach ggplot2 plyr Rdpack reshape2 stabledist]; }; + rlfsm = derive2 { name="rlfsm"; version="1.0.0"; sha256="06dar7hfxpah3dm8zlfq5g0n2gwr9wjch1dy08f8dj22600spbya"; depends=[doParallel foreach ggplot2 plyr Rdpack reshape2 stabledist]; }; rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; }; rlmDataDriven = derive2 { name="rlmDataDriven"; version="0.4.0"; sha256="1fhh2siafpqmvpxi2piccxvvn5n38s5d6as6iyn43rgpsslswc8g"; depends=[MASS tseries]; }; rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; }; rly = derive2 { name="rly"; version="1.6.2"; sha256="1bb55g3rip524dccaxvahjxsi2cimxqvzc897pxplv3bb10pm0r2"; depends=[futile_logger R6]; }; + rmRNAseq = derive2 { name="rmRNAseq"; version="0.1.0"; sha256="0hh44bn7z7945aw722haazw8dx7fwzym67jismkygzhnksh59wqi"; depends=[AUC Biobase DESeq2 edgeR limma MASS Matrix nlme reshape rlang splineTimeR statmod]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; rmake = derive2 { name="rmake"; version="1.1.0"; sha256="00qlki2vps505nxzmfykf1iyq4b0y20nb75hbfcj63ap46z7zk3c"; depends=[assertthat pryr rmarkdown visNetwork]; }; @@ -12491,14 +12739,14 @@ in with self; { rmapshaper = derive2 { name="rmapshaper"; version="0.4.1"; sha256="0kd8hppn4d3z527s3kqz0mll7qjy0pbxbif46dfqx3rci6m62a68"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; rmapzen = derive2 { name="rmapzen"; version="0.4.2"; sha256="1vybg3lmrqghvd23jwpfmypvqz2b65bc0m2pwbpizwkkg35iza70"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmargint = derive2 { name="rmargint"; version="1.0.2"; sha256="1hl2nxmgknw74jvmc05wz6zkf7i151xl7h7hdpcivvm60yizlx8i"; depends=[]; }; - rmarkdown = derive2 { name="rmarkdown"; version="1.16"; sha256="1p11g9lma604ndrhvyvriqxxp91lardc543nmvmr49n1m7309qvz"; depends=[base64enc evaluate htmltools jsonlite knitr mime stringr tinytex xfun yaml]; }; + rmarkdown = derive2 { name="rmarkdown"; version="1.18"; sha256="0fykzbb5kjsqc8v6gjcdma7rmq0gailp30qij6plgna4d8nhjw3w"; depends=[base64enc evaluate htmltools jsonlite knitr mime stringr tinytex xfun yaml]; }; rmatio = derive2 { name="rmatio"; version="0.14.0"; sha256="072fxg81r4rsc71qrf5p6lr5s3gchbgvxhyzwlx3wxw7y2px6w7y"; depends=[Matrix]; }; rmcfs = derive2 { name="rmcfs"; version="1.3.0"; sha256="0mvrf6d2pfdvsgfgwkkb7k7q367k5i71wbq96gjhfimxr2lxwf7f"; depends=[data_table dplyr ggplot2 gridExtra igraph reshape2 rJava stringi yaml]; }; rmcorr = derive2 { name="rmcorr"; version="0.3.0"; sha256="1p05ln653yrd02wmn8wfzawiw6a924d8an0568fcbgl1pdna43b1"; depends=[psych RColorBrewer]; }; rmd = derive2 { name="rmd"; version="0.1.4"; sha256="01ib000hq6acklvysdxnyjmlypnxznsk0zymj1f6vs9vwh711f00"; depends=[blogdown bookdown bookdownplus citr cli crayon curl devtools dplyr DT magrittr mindr miniUI pagedown purrr rappdirs rmarkdown rstudioapi rticles rvest shiny shinyjs tibble tinytex xaringan xml2]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; rmda = derive2 { name="rmda"; version="1.6"; sha256="1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc"; depends=[caret MASS pander reshape]; }; - rmdcev = derive2 { name="rmdcev"; version="0.9.0"; sha256="0bcriwrfynhvw27z57374hc7llsv5l58baplqkw4diq16gpqx5ik"; depends=[BH dplyr purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidyr tidyselect tmvtnorm]; }; + rmdcev = derive2 { name="rmdcev"; version="1.1.1"; sha256="0pz60hzd3gvmrzcb29h0h4zb4lr5sdyw3nsa84hixsph00cf4lm0"; depends=[BH dplyr Formula purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidyr tidyselect tmvtnorm]; }; rmdfiltr = derive2 { name="rmdfiltr"; version="0.1.0"; sha256="05hr6lrlsdp8g9y41g3zz875x9gg1533as95krb37ywp3rr4p819"; depends=[assertthat rmarkdown]; }; rmdformats = derive2 { name="rmdformats"; version="0.3.5"; sha256="16ncawidfkkzh67ak6043kg504glli5g9npfg7vsrw168r7mmyci"; depends=[bookdown htmltools knitr questionr rmarkdown]; }; rmdplugr = derive2 { name="rmdplugr"; version="0.4.0"; sha256="10xwaxjhrkkinahv9n29br0znkfvbyvx7yjva7ycrlibndm55bxq"; depends=[bookdown rmarkdown]; }; @@ -12512,11 +12760,11 @@ in with self; { rmio = derive2 { name="rmio"; version="0.1.2"; sha256="0lhfwjmi5s7ysm4jrb0r18cm3sdcswdrsx9kps4dv7v2yab4jkvx"; depends=[]; }; rmonad = derive2 { name="rmonad"; version="0.5.0"; sha256="0m7hhmn87rfh49hxrjlcxcq6q36niyxlh3w2frld68jkbks71jn5"; depends=[digest glue igraph magrittr pryr]; }; rmpw = derive2 { name="rmpw"; version="0.0.4"; sha256="1a49rvdwvmccv4gfir48fw0b9jyrpc2q9zfyk5j9b7nxsx6x7abl"; depends=[gtools MASS]; }; - rms = derive2 { name="rms"; version="5.1-3.1"; sha256="0drbr3g0x5pbxyzy50wnf92rbal8izizrcqslqhg0gsfg9adjih9"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; + rms = derive2 { name="rms"; version="5.1-4"; sha256="19knh1sw0icw6jh9wfb2hq5jf49i2qfvp9myvqm5paa495689x9q"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="0.0.0.2"; sha256="0by2d6l25lf5vidxbkcxghpxycffyldzzbxcw6h4rm86zmkkv1m0"; depends=[magrittr purrr readr tidyverse xts zoo]; }; - rmumps = derive2 { name="rmumps"; version="5.2.1-5"; sha256="0pgfmnkj3v4raf49w5229m27a54jpkhd000r202xyp679vcwsapc"; depends=[Rcpp]; }; + rmumps = derive2 { name="rmumps"; version="5.2.1-6"; sha256="1a0y4iaq2697z34b8jr9pm12n4qa5knxb1q995bli50pygz8zyl8"; depends=[Rcpp]; }; rmutil = derive2 { name="rmutil"; version="1.1.3"; sha256="1nl20nyahnm55z41d096ni9iqhn19ab98i9c13ja1i6ik4gg9fks"; depends=[]; }; rmweather = derive2 { name="rmweather"; version="0.1.3"; sha256="1qdf511vmpffrdfcxlll54km2s0pf6pdswj8401k4ymv5iif91hl"; depends=[dplyr ggplot2 lubridate magrittr pdp purrr ranger stringr strucchange tibble viridis]; }; rmytarget = derive2 { name="rmytarget"; version="2.1.8"; sha256="1sn1pncxnv2jgxhmbm4zlq6zyi8nsz90x8b7697qlqf2la837v96"; depends=[dplyr httr lubridate purrr stringr]; }; @@ -12533,10 +12781,10 @@ in with self; { rngtools = derive2 { name="rngtools"; version="1.4"; sha256="1kivj594bn774lbn29ws2rmzy2km99sza0j3jqvhal6hwmk27a9s"; depends=[digest pkgmaker stringr]; }; rngwell19937 = derive2 { name="rngwell19937"; version="0.6-0"; sha256="0m6icqf7nckdxxvmqvwfkrpjs10hc7l8xisc65q8iqpnpwl5p2f6"; depends=[]; }; rnn = derive2 { name="rnn"; version="0.9.8"; sha256="1f1h7x9vff0jrdkv1gpxlmlr5v1c81gsfxy4z83rq3v0drpxahnv"; depends=[shiny sigmoid]; }; - rnoaa = derive2 { name="rnoaa"; version="0.9.0"; sha256="1hhp2axqpqrfvn5isxay1ci032inagir57b0z52apcjk1y271c4r"; depends=[crul dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; + rnoaa = derive2 { name="rnoaa"; version="0.9.5"; sha256="123gzgycv8lnx9dikkqjn2fhnpzlwgxdmzkvdvf3kgwl1gw9170b"; depends=[crul dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; rnpn = derive2 { name="rnpn"; version="0.1.0"; sha256="10xx8fxgdknv71ks42xxvf38xsmjy6s87y67wi21673v0n07fxb5"; depends=[data_table httr jsonlite plyr]; }; rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; - rnrfa = derive2 { name="rnrfa"; version="2.0"; sha256="0ymfgas1hzmmmf56ax47nfjm9mf9yzj48np1fzyshhzavnlymg0s"; depends=[curl dplyr ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble xts]; }; + rnrfa = derive2 { name="rnrfa"; version="2.0.1"; sha256="1p7wc3czp0i6il16nc1syp51i5gnb1hjx32j35ms8v20ficyb1zp"; depends=[curl dplyr ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble xts]; }; roadoi = derive2 { name="roadoi"; version="0.6"; sha256="1mlf63018qpgyqma51fas1nvags7qcrsw11hm6c1idnxjh0sz82z"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; roahd = derive2 { name="roahd"; version="1.4.1"; sha256="0d89d21s32bsjkm8bdiqrbccd3m9badh87vrsb1laawhl4hr3dn9"; depends=[dplyr magrittr robustbase scales]; }; robCompositions = derive2 { name="robCompositions"; version="2.1.0"; sha256="17kpl35lynm1fwsl8ljwl6yjph1fps8vk2m8qxsx0x64wwfvccim"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp robustbase rrcov sROC tidyr VIM zCompositions]; }; @@ -12546,12 +12794,14 @@ in with self; { robcp = derive2 { name="robcp"; version="0.2.4"; sha256="1pvd8dw0kgwxrwnafaraya1qm3cwnp2c3ma569i7nwm2xsys76xj"; depends=[]; }; robeth = derive2 { name="robeth"; version="2.7-5"; sha256="0jz3ivck9ma8x03sz41zkln3qh70ckfm5c2l57nlxi0ci5h0dfh2"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; - robfilter = derive2 { name="robfilter"; version="4.1.1"; sha256="1fxqva2khk16sj5ka5zdpaknh2w9n925ys0i4v7ahqvzhnxg6l3b"; depends=[lattice MASS robustbase]; }; + robfilter = derive2 { name="robfilter"; version="4.1.2"; sha256="0mvpaf6g694b7175bl3yr6lxbwla4pwp7g4y34qb4klgl5n3nw03"; depends=[lattice MASS robustbase]; }; + robin = derive2 { name="robin"; version="0.99.1"; sha256="0ghlfkpcfnywfb8psszbkzrljlissw11y4n52hhgm9ivk2ds4lk5"; depends=[DescTools fdatest ggplot2 gprege igraph networkD3]; }; robis = derive2 { name="robis"; version="2.1.8"; sha256="1qi6ay0v3vc2gz5xalgj8vfx7zaiz5726mkkgwawxfj35gmdq0mk"; depends=[dplyr ggplot2 httr jsonlite leaflet]; }; - robmed = derive2 { name="robmed"; version="0.4.0"; sha256="1wds9yh2sjjwmfmkjaxarmbmq226gm55m2r1y6ry41i3kjjrr83b"; depends=[boot ggplot2 quantreg robustbase shiny]; }; + robmed = derive2 { name="robmed"; version="0.5.0"; sha256="02kavd5vllp3mf2gir66kf00n1ppc19k47zg4agfm2rhcn8whz9s"; depends=[boot ggplot2 quantreg robustbase shiny]; }; robmixglm = derive2 { name="robmixglm"; version="1.0-2"; sha256="0z23frjv9yscw0q33s5vlrmisg9an5hksyhcrgcnlan6x63r91kq"; depends=[actuar bbmle boot fastGHQuad MASS numDeriv Rcpp VGAM]; }; robotstxt = derive2 { name="robotstxt"; version="0.6.2"; sha256="1c1rhiwkdzvbspwa5km6gp3sjhzmb60ljibb2pf26s931lkr5b6l"; depends=[future future_apply httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; + robregcc = derive2 { name="robregcc"; version="1.0"; sha256="159ms69jqjkf8bhi4hkm929hpwqi8qbcfyaahcjlkyximv7qnqaz"; depends=[magrittr MASS Rcpp RcppArmadillo]; }; robsurvey = derive2 { name="robsurvey"; version="0.1.1"; sha256="0rf2sd7maz565hlgpyhvkswqyck01hif4mg5isbnnky9n3nc98pi"; depends=[survey]; }; robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; }; robust = derive2 { name="robust"; version="0.4-18.1"; sha256="0xs098pfw5zdcdk3rsxkylfl6d2pyp566s5v92bzhgl7h8c90cfy"; depends=[fit_models lattice MASS robustbase rrcov]; }; @@ -12571,19 +12821,19 @@ in with self; { robustrao = derive2 { name="robustrao"; version="1.0-3"; sha256="0gcxxizsg380blrv55vl9f3az8gnr274c6idi0pimhh5c26h7ma6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-11"; sha256="08c6dyzki68hzl006s12bkjiirlw2n2isirjh8b79sd6zjrjlh72"; depends=[Matrix Rcpp RcppArmadillo]; }; robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; }; + robvis = derive2 { name="robvis"; version="0.3.0"; sha256="0xzvx3230ydd082jmdlm70vyhjizknngfzhvcbqpdcm403klni5h"; depends=[ggplot2 scales tidyr]; }; rocNIT = derive2 { name="rocNIT"; version="1.0"; sha256="18vxyh1wcq6dv62xf2dyl4226cd00n4hlbaqnynl9j5gnrmmsvi1"; depends=[]; }; - rocTree = derive2 { name="rocTree"; version="1.0.0"; sha256="0zq2w4jjkh6b657b92knkmnl121xiybnxq81x4xzz5nsg1sc8w1q"; depends=[data_tree DiagrammeR dplyr flexsurv ggplot2 MASS survival tibble]; }; rocc = derive2 { name="rocc"; version="1.2"; sha256="00yxbbphhwkg4sj2h7pd9vw86yavl711nk8yylwmjd3qv39qjml0"; depends=[ROCR]; }; roccv = derive2 { name="roccv"; version="1.2"; sha256="18kq2gzcbz97dw168xppql8k3slpkfl8yv1d8ac48damlhvipif1"; depends=[glmnet pROC]; }; - rock = derive2 { name="rock"; version="0.0.1"; sha256="1kss47w89rbdzzh92p7fwci76n6ld7pnxw9s6rjii039q7zrywk0"; depends=[data_tree DiagrammeR dplyr glue purrr yum]; }; + rock = derive2 { name="rock"; version="0.1.0"; sha256="0plyn9n3ngbdakdv98ywakr5xgkwqkwspla3pdmsi6w12zsvkak8"; depends=[data_tree DiagrammeR dplyr glue purrr yum]; }; rockchalk = derive2 { name="rockchalk"; version="1.8.144"; sha256="07dp1n155b9gfvk8l30h6bhjbhbylsjxfzns08mryn4mxj3nqpnb"; depends=[carData kutils lme4 MASS]; }; rococo = derive2 { name="rococo"; version="1.1.7"; sha256="1fp3kk5j9kc0vyr50rlbsxjc9p3qz5137sifxsbd297p7zj1fcs2"; depends=[Rcpp]; }; rocsvm_path = derive2 { name="rocsvm.path"; version="0.1.0"; sha256="1pd59bzcz96sxpp725pqa7pjh2gdrfapbilp4wccjkf5290zw56v"; depends=[quadprog svmpath]; }; rodd = derive2 { name="rodd"; version="0.2-1"; sha256="01zrkw4lr21vxk2grfc37iyrcipfdcj5m0i7gnxsvs435y9fqagd"; depends=[Matrix matrixcalc numDeriv quadprog rootSolve]; }; - rodeo = derive2 { name="rodeo"; version="0.7.4"; sha256="16yzj12m9wvcrqxc33rpbyzbq019swi5jxnbda9crfwjdvafaa0d"; depends=[deSolve R6]; }; + rodeo = derive2 { name="rodeo"; version="0.7.5"; sha256="0825py3a41ccbd1dplkv1hci11wcp0ai5m37489cjg4gqaka7qgn"; depends=[deSolve R6]; }; rodham = derive2 { name="rodham"; version="0.1.1"; sha256="15mrlx7azvwkwjgfplvs5fhk2nwlg9pay2l99q327p8hx87jr8ra"; depends=[jsonlite plyr splitstackshape stringr tibble]; }; - roll = derive2 { name="roll"; version="1.1.2"; sha256="16s60r8p85q176k5smzcdcqzx9snf62v8q6r3ddvpp7mh5l9clgj"; depends=[Rcpp RcppArmadillo RcppParallel]; }; - rollRegres = derive2 { name="rollRegres"; version="0.1.2"; sha256="1cgdg4a40dqy7kc7bx567w8hirlwzg5aqn41hi5m1plzzprmcfzm"; depends=[checkmate Rcpp RcppArmadillo]; }; + roll = derive2 { name="roll"; version="1.1.3"; sha256="1fhxsvxhvf7m01n1fyyq9pc65w16wpw76ww4l538m9m54g49xs8g"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + rollRegres = derive2 { name="rollRegres"; version="0.1.3"; sha256="1rf6hdbndindq6kr5yzyqq4jy1c11shfdvjb8mwm957dd0kbs3rx"; depends=[checkmate Rcpp RcppArmadillo]; }; rollbar = derive2 { name="rollbar"; version="0.1.0"; sha256="1q2ym0vkgbdnibxmwx0bp9c20g3bm8fzwwgs3j4bxg1ydg3gnkj4"; depends=[httr]; }; rolldown = derive2 { name="rolldown"; version="0.1"; sha256="1awr8lcxz7y9mjhia4p85jvixc72gj525gk2jjl13njgq6shp0b5"; depends=[bookdown htmltools jsonlite]; }; rollmatch = derive2 { name="rollmatch"; version="2.0.1"; sha256="1nyxsl2n8bnx31i78pzq0b19d58w70rqdn62bzrxdd11h9ph2dpr"; depends=[dplyr magrittr]; }; @@ -12591,11 +12841,12 @@ in with self; { rolocISCCNBS = derive2 { name="rolocISCCNBS"; version="0.1"; sha256="100jh5m2c1zp5wg3wd4y2i47dzx1j0g6lfwyqmwk4bz99yzzz5am"; depends=[colorspace roloc]; }; rolr = derive2 { name="rolr"; version="1.0.0"; sha256="04nm4q0mlr4w6jb0frykzlyknfn3gn02ysqr5ll5jch6wawichy2"; depends=[survival]; }; rolypoly = derive2 { name="rolypoly"; version="0.1.0"; sha256="11nf7in6n03675l11ynl4rp20rlzy7jli3m518s4sqqxdm8f8ci7"; depends=[data_table dplyr foreach ggplot2 glmnet MASS Matrix matrixcalc]; }; - rootSolve = derive2 { name="rootSolve"; version="1.7"; sha256="08ic6ggcc5dw4nv9xsqkm3vnvswmxyhnqnv1rdjv1h2gy1ivpcq8"; depends=[]; }; + rootSolve = derive2 { name="rootSolve"; version="1.8.1"; sha256="0skrspq7sd7gaq73w91km14v8znc8chncgy64hvjgcng2xw15phx"; depends=[]; }; rootWishart = derive2 { name="rootWishart"; version="0.4.1"; sha256="1l9pr3i20hi5k02qnlb3blxhlvp2j0njn74xslw3gcjvyzjlr12j"; depends=[BH Rcpp RcppEigen]; }; roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; ropenaq = derive2 { name="ropenaq"; version="0.2.7"; sha256="161yc2d82iivxaqpl5kzvxcmcqjpv6s5jj9pa304vj8cz0rnxgfr"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; + ropenblas = derive2 { name="ropenblas"; version="0.1.0"; sha256="1lbdkiagbgpdj7zvy7vszbwh7zdz2bfcmjgj4hi3lry9qq9k6w1a"; depends=[fs getPass git2r glue magrittr rstudioapi stringr]; }; ropendata = derive2 { name="ropendata"; version="0.1.0"; sha256="1bv6y241abs6pb4wq5ybx9x4zh72kf8ffs3vlcgdsmhw4jwrsxdl"; depends=[httr jsonlite]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; roperators = derive2 { name="roperators"; version="1.1.0"; sha256="0klmk1jmh1iysgf345qa6qyjmn1pkz072ha254k90flprgicg7c6"; depends=[]; }; @@ -12604,8 +12855,8 @@ in with self; { roptim = derive2 { name="roptim"; version="0.1.2"; sha256="0kamdhyc7s1i7mbgzf6zbdbcs2qjjq4wgl1v181xzhq6gpv7fhy6"; depends=[Rcpp RcppArmadillo]; }; rorcid = derive2 { name="rorcid"; version="0.5.0"; sha256="0508dc3av593bqylrq5zysav56p9243hg35gs8vhnbqjngfm1pib"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; - rosetta = derive2 { name="rosetta"; version="0.1.1"; sha256="0q2rhz9icx4w7ihb289v1bzngbi3dnsvyviv6mvg32il1xfw8ji9"; depends=[car ggplot2 ggrepel gridExtra lme4 multcompView pander plyr psych pwr rio ufs]; }; - rosetteApi = derive2 { name="rosetteApi"; version="1.12.1"; sha256="1b3cwxg7ja7g3bdl13j23xs8lw6ip70r4bah92pqs5pzmb5hx0wz"; depends=[httr jsonlite]; }; + rosetta = derive2 { name="rosetta"; version="0.2.0"; sha256="0b5xcy9gzw8d71m2pyx1m71mnbdggckhd42c7pzhkivkl79n5wdz"; depends=[car ggplot2 ggrepel gridExtra lavaan lme4 multcompView pander plyr psych pwr rio ufs]; }; + rosetteApi = derive2 { name="rosetteApi"; version="1.14.3"; sha256="1fq5wg2rgcqv4x5045zgccpawgi6ac47hykfam9waqjnqy7r4y1a"; depends=[httr jsonlite]; }; rosm = derive2 { name="rosm"; version="0.2.5"; sha256="10n3yzhk29i3mzbcg6nkjqgvwc9n53ax0d7imn9l4a9msa06as07"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; }; rospca = derive2 { name="rospca"; version="1.0.4"; sha256="1pxm34xsc2610n0i6dwcm4rhn016yqb03f8vrm93r7285c04n4q7"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; }; @@ -12619,10 +12870,10 @@ in with self; { roundhouse = derive2 { name="roundhouse"; version="0.0.1"; sha256="142dw9ky6fyp5n8zf5lymx083gi56q6wxj4jm0m8cjb0khiqw2lq"; depends=[httr jsonlite]; }; routr = derive2 { name="routr"; version="0.4.0"; sha256="1vswq7vm80nwb50grr4cs290kbq5lx9b19dq0c2wlp9d2dxk50si"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; - roxygen2 = derive2 { name="roxygen2"; version="6.1.1"; sha256="0wq29ilqas8yn2z8v49fk0hbgchg29nmyyhwczgdipz0cbhbfipd"; depends=[brew commonmark desc digest pkgload purrr R6 Rcpp stringi stringr xml2]; }; + roxygen2 = derive2 { name="roxygen2"; version="7.0.2"; sha256="162xag27hwwyadfwm5zpyy15nxwhw2vbhwapx3jmi9cfyryr68sq"; depends=[brew commonmark desc digest pkgload purrr R6 Rcpp rlang stringi stringr xml2]; }; roxygen2md = derive2 { name="roxygen2md"; version="1.0.0"; sha256="1gvrfy0sk5qi8d93zxj5f7xgnnw0w38zyxdik4ckf0pkk0zdm27a"; depends=[desc devtools enc rex rlang tibble usethis withr]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; - rpact = derive2 { name="rpact"; version="2.0.4"; sha256="1x4jrvprss2s4qgagypqrq0flalkqlxha8ap2bcf5wc7i63c5c8m"; depends=[Rcpp]; }; + rpact = derive2 { name="rpact"; version="2.0.5"; sha256="0mj4l1sdwqbxccsailx2b252qswq92kjl7cq0b2s5c41jxjc97k4"; depends=[Rcpp]; }; rpanel = derive2 { name="rpanel"; version="1.1-4"; sha256="0yzasb4k5jcx3wfsll9k9alyrwc0l1x6pk91nj7cqrdiapw8j519"; depends=[]; }; rpart = derive2 { name="rpart"; version="4.1-15"; sha256="0p5frya963ppn476p5dxs2mnarsalksr6gw9zzmjsn8ikq7bx3ib"; depends=[]; }; rpart_plot = derive2 { name="rpart.plot"; version="3.0.8"; sha256="0y8054jw44jkjg8ijp3p2grsqwrmsdfzk8vps9ksgm7mgfq5732d"; depends=[rpart]; }; @@ -12642,33 +12893,34 @@ in with self; { rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; }; rplos = derive2 { name="rplos"; version="0.8.6"; sha256="1i5dzlv57bpddf9qsnq0azc0fsbmzqz9bkrijabp2qwxg0w76mcx"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; rplotengine = derive2 { name="rplotengine"; version="1.0-7"; sha256="1bbciq84l0h6g4qajlcqg3v66g2rspflv6k7x5h5qzwlcb4p4dps"; depends=[xtable]; }; + rpmodel = derive2 { name="rpmodel"; version="1.0.2"; sha256="0daldm91lmmk6ivsj3rknn60w5fa9wakrnxxp77xm88bf1fr5yda"; depends=[rlang]; }; rpms = derive2 { name="rpms"; version="0.4.0"; sha256="10zw0xln0vjrzrilyn67nnw13aadnskzca1930fvb483c691bm36"; depends=[Rcpp RcppArmadillo]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; }; - rpostgis = derive2 { name="rpostgis"; version="1.4.2"; sha256="0zbq9605jk26r2mdkigi2pgn2s5ssrp5dvm4kbgk7fscnm1r6fbs"; depends=[DBI raster rgeos RPostgreSQL sp]; }; + rpostgis = derive2 { name="rpostgis"; version="1.4.3"; sha256="04x5qdz0kznxnp9kygp0m2rjxyhqfz3mc81mcr4aw6cy5p4zp9aq"; depends=[DBI raster rgeos RPostgreSQL sp]; }; rpostgisLT = derive2 { name="rpostgisLT"; version="0.6.0"; sha256="1adwpkfndm6n3s9xcx8zrwnj6bmgvq4nzs072fnl5i6kjy6ngjm6"; depends=[adehabitatLT DBI htmltools leaflet lubridate magrittr mapview rpostgis RPostgreSQL sf shiny shinyWidgets sp]; }; - rppo = derive2 { name="rppo"; version="1.0"; sha256="0agqys52l8bb3mc3bpawym12phl5r1ymalfvgrq5w6n78lpzcxls"; depends=[httr jsonlite plyr readr]; }; rpql = derive2 { name="rpql"; version="0.7"; sha256="18llgwk1jfwf3y1dabpc508kfb1k4yh4cr4k76azkziv11arbh0c"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; rprev = derive2 { name="rprev"; version="1.0.2"; sha256="0gdragdnakq9476df116viw8nyv0iahsfm1a3insv01j8x1y5l8c"; depends=[data_table dplyr ggplot2 lazyeval lubridate magrittr survival tidyr]; }; rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; rprojroot = derive2 { name="rprojroot"; version="1.3-2"; sha256="12r3fdxmi2pmwn6ic3rhg0b20ll5z420m0d8fziv1n21961namnz"; depends=[backports]; }; - rpsftm = derive2 { name="rpsftm"; version="1.2.5"; sha256="1l8i1v4si5x6g8mn7n6vllfdywzcpmxik7mg91ig1dci9bgcd9ya"; depends=[ggplot2 rootSolve survival]; }; + rpsftm = derive2 { name="rpsftm"; version="1.2.6"; sha256="1bidxyvn8r3pdd3yf1clcc4dil3wsl3hc4kznyhhk67870p25n6s"; depends=[ggplot2 rootSolve survival]; }; rpst = derive2 { name="rpst"; version="1.0.0"; sha256="10cbgj67lqgh5bawwa0nwj9kfl3jg4vdm121kc61q199v8dw7nrz"; depends=[plotrix survival]; }; rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; rptR = derive2 { name="rptR"; version="0.9.22"; sha256="0vvjc6qiq71d5wckl77z606q1fp43mgrfzp1bxcab96n5whb2r9k"; depends=[lme4 pbapply]; }; rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; rqPen = derive2 { name="rqPen"; version="2.1"; sha256="195s2l60llw2hb5abykydajadzg44700j5kahkw57413hh86qrh0"; depends=[quantreg regpro]; }; - rqdatatable = derive2 { name="rqdatatable"; version="1.2.2"; sha256="1r1i8g17ij5397xa86rzax4iw3v5gniy2d2s4a724zj8fxwcws34"; depends=[data_table rquery wrapr]; }; - rquery = derive2 { name="rquery"; version="1.3.8"; sha256="1pmxs1w2c84wljrq10lch8bs0l4nbx6l5nwm5mq9ynal9xhp4qas"; depends=[wrapr]; }; + rqdatatable = derive2 { name="rqdatatable"; version="1.2.4"; sha256="01q4pzipn3kbbbb9fika5n727rbjca66mldfh0kn5gx8mlsf08ny"; depends=[data_table rquery wrapr]; }; + rquery = derive2 { name="rquery"; version="1.4.0"; sha256="0dnbdi9fn5r2s2p0f9z1qnszxnbbsvwgnbql5awrk5zjbajybxgy"; depends=[wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rr2 = derive2 { name="rr2"; version="1.0.2"; sha256="099vjg91ni2bnxlra18pvgsvzrl28zrj639cdjrh3wkpqv99d04q"; depends=[ape lme4 Matrix nlme phylolm]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6"; sha256="1bw4pjj9hm9ik5bvvklnlkykhlqm6k7pbkma1iwc3kbg8shpbd18"; depends=[]; }; + rrat = derive2 { name="rrat"; version="1.0.0"; sha256="1j1jd32pgggn5cqv66l63sw5p4hblgpznf33wd0zdbfapwy8rx4r"; depends=[quantreg]; }; rray = derive2 { name="rray"; version="0.1.0"; sha256="0x4wavvjsiy8b9bhgxddisx82k6q52qhngr2am50bf38d3x2n58h"; depends=[glue Rcpp rlang vctrs xtensor]; }; - rrcov = derive2 { name="rrcov"; version="1.4-7"; sha256="14zjyqcdiqx6js99nx5s8hmyx564ixy2d8s6i7wa50xmx368rl6b"; depends=[cluster lattice mvtnorm pcaPP robustbase]; }; + rrcov = derive2 { name="rrcov"; version="1.4-9"; sha256="11zvxidlb1pr2j5dzvmbjqdgsmmicsq8ppjf5wcfykfyf2fkcmz7"; depends=[cluster lattice mvtnorm pcaPP robustbase]; }; rrcov3way = derive2 { name="rrcov3way"; version="0.1-10"; sha256="0ybl759mfva185z2mjs5s8cjim9h8dk4gkqnva2rj9kxp7i45srd"; depends=[robustbase rrcov ThreeWay]; }; - rrcovHD = derive2 { name="rrcovHD"; version="0.2-5"; sha256="1wv50lcjf0fsxb1zagxbrcx68ilfmnmkc8ccpy9hw3qql5p368ij"; depends=[pcaPP pls robustbase robustHD rrcov spls]; }; - rrcovNA = derive2 { name="rrcovNA"; version="0.4-9"; sha256="1qc9xqm5x55dqjx1y7s4a2nwc07v32rygicbb8469knxasf92cs3"; depends=[cluster lattice norm robustbase rrcov]; }; + rrcovHD = derive2 { name="rrcovHD"; version="0.2-6"; sha256="03dr42np7a0yl3hi2iz4xp5b6yrazx6vlsjrby6fcn9r8y1fmac9"; depends=[pcaPP pls Rcpp robustbase robustHD rrcov spls]; }; + rrcovNA = derive2 { name="rrcovNA"; version="0.4-13"; sha256="1nq37iaay2w7y573ni5dgi4vzx5rnzibjimb97k6gzn3si6r68g9"; depends=[cluster lattice norm robustbase rrcov]; }; rrd = derive2 { name="rrd"; version="0.2.2"; sha256="104iz2y49vzm92a8nrvgzrjyljxl467mp1hjnjmzl4rhf9kl809y"; depends=[assertthat tibble]; }; rrecsys = derive2 { name="rrecsys"; version="0.9.7.3.1"; sha256="1qnjriv1xq4gjjhzz8jxrbk88mw5xddl2l2i4bmfhnxhi51d2rk3"; depends=[ggplot2 knitr MASS Rcpp registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; @@ -12681,7 +12933,7 @@ in with self; { rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; rroad = derive2 { name="rroad"; version="0.0.5"; sha256="09q5r9wq3vm5wy5aigx9wffv7m0njlp3sma1djm6cp7hhwgss0nj"; depends=[]; }; rromeo = derive2 { name="rromeo"; version="0.1.0"; sha256="0dab3gcdpc5w9nxjw02348vj8cbrr8324aw982kjlrwkpjnvmfv5"; depends=[httr xml2]; }; - rrpack = derive2 { name="rrpack"; version="0.1-10"; sha256="03lr72327fa8sim2n4bfrwni4hhn5rf27mnpw0lrscjw37gjd7bz"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; + rrpack = derive2 { name="rrpack"; version="0.1-11"; sha256="1bchha6dbkgc1raiks22cjmqzsias0c0frz8il67napkgmwlqk6d"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; }; rrscale = derive2 { name="rrscale"; version="0.1.3"; sha256="0pf5pac883f1p6gidy2k1nrbrygi1va8r5h785449dhphx806bf5"; depends=[abind DEoptim doParallel foreach]; }; rrtable = derive2 { name="rrtable"; version="0.1.0"; sha256="1rvqb32fr63dkm5kz291pxzli8yi10k76v0lm1qdn28cx1l6ff3y"; depends=[devEMF editData flextable ggplot2 magrittr moonBook officer purrr readr rmarkdown rvg shiny stringr ztable]; }; @@ -12694,6 +12946,7 @@ in with self; { rscielo = derive2 { name="rscielo"; version="1.0.0"; sha256="005nmi18831a2krl2xhj74ya9mfjq8zzccjafnfxha89x8ygxsa3"; depends=[dplyr httr magrittr purrr rvest stringr tibble xml2]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; rsconnect = derive2 { name="rsconnect"; version="0.8.15"; sha256="018cdbcxlbvqpwzv0qxvvz8yhl0d6gcavpbk1m5fyrgpvys1brri"; depends=[curl jsonlite openssl packrat rstudioapi yaml]; }; + rscontract = derive2 { name="rscontract"; version="0.1.0"; sha256="0hhhndvrk9z6izdq4vh95bi9879k0svgpmhajrnm20xc5sb136jf"; depends=[]; }; rscopus = derive2 { name="rscopus"; version="0.6.6"; sha256="0kl6rv0j2396b8izvy0lp1f588il6w3yhq6d4swv8x8z14rsgcpw"; depends=[dplyr glue httr jsonlite plyr tidyr]; }; rscorecard = derive2 { name="rscorecard"; version="0.13.0"; sha256="1iahfdgjslcnhm24ynvyzdvlrkdkjy1s6hhxqaqc56wprd5bhx27"; depends=[dplyr httr jsonlite lazyeval magrittr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; @@ -12701,35 +12954,34 @@ in with self; { rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; - rsf = derive2 { name="rsf"; version="0.1.0"; sha256="1jnay391jqylhg4d5fjg0mr38apa64v42gv4y83fqx3x04q3l9zx"; depends=[bookdown stringr usethis whoami yaml]; }; + rsf = derive2 { name="rsf"; version="0.2.0"; sha256="0p9h61nvr5p42c7cjqgsvv45ycircw8jd4h3075rly08jbp02nim"; depends=[bookdown knitr magrittr rlang usethis yaml ymlthis]; }; rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; - rsggm = derive2 { name="rsggm"; version="0.3.1"; sha256="1yl0gq5qyw7vgagdnvwgkzc0cfnb62ydcndmzxvrlg1jpbkmq7yl"; depends=[glasso MASS Matrix QUIC]; }; - rsimsum = derive2 { name="rsimsum"; version="0.6.1"; sha256="1ypkh27n71il64l1v2qbgkmss62j965ybf89asprdp15vcbhld33"; depends=[checkmate ggplot2 ggridges rlang scales]; }; + rsimsum = derive2 { name="rsimsum"; version="0.7.0"; sha256="1c63nzvyrnjva99hh3ikijpgsmnks8y8qsqxshxn9s1gjix7il5p"; depends=[checkmate ggplot2 ggridges rlang scales]; }; rsinaica = derive2 { name="rsinaica"; version="0.6.1"; sha256="1ba19b2fgnnl50qp6hgjppgxbadghq68qap9f0m51k2k3ijgfiwn"; depends=[dplyr httr jsonlite lubridate stringr]; }; rskey = derive2 { name="rskey"; version="0.4.1"; sha256="0l9z5zbii4wi7da6cl9mr62zn72pc3dgfhk6dp8sjx4jbzpa94s3"; depends=[berryFunctions miniUI rstudioapi shiny]; }; rsleep = derive2 { name="rsleep"; version="1.0.1"; sha256="0kjb5sgv1y50cqg54dy5cx9ngr64hx2bhfav314vm2alnxsk19jh"; depends=[edfReader ggplot2 jsonlite phonTools signal]; }; rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; }; - rslurm = derive2 { name="rslurm"; version="0.4.0"; sha256="1ck4ky5d0pf8hnxz1ijbjk0nfyj1hfnhf9la5qrqw2spa09z82ki"; depends=[whisker]; }; + rslurm = derive2 { name="rslurm"; version="0.5.0"; sha256="0dpxglcsqa2k0nak10515ga13c46rb4mrbpbr3gv7xckg6347zqg"; depends=[whisker]; }; rsm = derive2 { name="rsm"; version="2.10"; sha256="0a6bxrb0qad40lnigqjv2pnwwzcwi1rcmh9gb1a1b00k1n3mnmlc"; depends=[estimability]; }; rsnps = derive2 { name="rsnps"; version="0.3.0"; sha256="1ym58gqpvn708228pbkq1klvl60a60bwxwm0arzzad3wh1wansxj"; depends=[crul data_table jsonlite plyr stringr XML xml2]; }; rsoi = derive2 { name="rsoi"; version="0.5.0"; sha256="0y7883b4zw95rhndxl66ji513a1m4riacbkbvd1bzkzq4jb3a8fc"; depends=[curl]; }; rsolr = derive2 { name="rsolr"; version="0.0.9"; sha256="1mxvzb7wvm1agv35r82pr1hxa3fimixcwf36j98qjlxj9p7valrw"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; rspa = derive2 { name="rspa"; version="0.2.5"; sha256="0jvrr3jaw66zqi5pal9dycpac24dn9v7lf2m63q01wmd8m3mlnv9"; depends=[lintools validate]; }; rsparkling = derive2 { name="rsparkling"; version="0.2.18"; sha256="0lhq9jxxib2krl298hy3sglh5lm5lyibknigpbxx68pn71jwp1hm"; depends=[h2o sparklyr]; }; - rsparse = derive2 { name="rsparse"; version="0.3.3.3"; sha256="0kdgyn9qcmblwqmz8c0hwcysvz38bjf98b6sj9qsg83kq7prj8zg"; depends=[data_table float lgr Matrix mlapi Rcpp RcppArmadillo RhpcBLASctl]; }; + rsparse = derive2 { name="rsparse"; version="0.3.3.4"; sha256="1n4h33vrbgia9pm04clji3qgvnamn53v334mj7z1ksx121avli38"; depends=[data_table float lgr Matrix mlapi Rcpp RcppArmadillo RhpcBLASctl]; }; rsppfp = derive2 { name="rsppfp"; version="1.0.4"; sha256="123yv54i58xj4wx9n08qp50mm4l271fm1zhzimrxx22wn2bg8zy5"; depends=[doParallel dplyr foreach igraph stringr tidyr]; }; rsq = derive2 { name="rsq"; version="1.1"; sha256="0pvnyf875jybid16mg1y3dmnlrk1vahckhr5zaai1a0k4i6mh4jf"; depends=[MASS]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; rstan = derive2 { name="rstan"; version="2.19.2"; sha256="1nh8sm97ck1fwmqj5ia70p5w8alcagx7y2956a3n5k97qfwwxr1i"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen StanHeaders]; }; rstanarm = derive2 { name="rstanarm"; version="2.19.2"; sha256="1k4sal4pmyyfb0n9k0x6n7kd04xq75scr6j357vpryaz8dfn46iz"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; - rstanemax = derive2 { name="rstanemax"; version="0.1.0"; sha256="0xwacxaj99qz4i2npgpiq4jggx73q53il3jm4qlhmpapbwrkbl5f"; depends=[BH dplyr ggplot2 magrittr Rcpp RcppEigen rstan rstantools StanHeaders tidyr]; }; + rstanemax = derive2 { name="rstanemax"; version="0.1.1"; sha256="0yvinnz0ybrarl1p36ibaiflava1hhdnh4avjgc5iq0b3nr6x42g"; depends=[BH dplyr ggplot2 magrittr purrr Rcpp RcppEigen rstan rstantools StanHeaders tidyr]; }; rstantools = derive2 { name="rstantools"; version="2.0.0"; sha256="1il0pn4ksbdkska5fmhvgaicvwnnc6cs08g6ags9fj1xkjiqmrsa"; depends=[desc Rcpp]; }; rstap = derive2 { name="rstap"; version="1.0.3"; sha256="176z39k54l5r60md6wziz828c46alv2pmqivvmhvb358crrb8x7n"; depends=[abind bayesplot BH dplyr ggplot2 lme4 loo Matrix nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders]; }; - rstatix = derive2 { name="rstatix"; version="0.2.0"; sha256="16xln4skyp222834glzzkck82p1dcfqhhkzhrnrbla81b9isziwn"; depends=[broom car corrplot dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; + rstatix = derive2 { name="rstatix"; version="0.3.0"; sha256="0rg1wfvjap09x0lc4hfiwsdk0ghldiy33lb97i9w5xs4napkj04d"; depends=[broom car corrplot dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.3"; sha256="07w7ixq1faq7mif2ksxcgl8n6ali9h0wx0nb2yz4kbdgvz68r7b9"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="1.0.0"; sha256="0g09fpp3432v78gqgn0hiva6zqr8yqn379wz4428wanmiskqr3f0"; depends=[]; }; - rstpm2 = derive2 { name="rstpm2"; version="1.4.5"; sha256="0xdvv27cf3b45ahvlzbn8n0kmj4kyc7sl52xjr71757ymf154q3g"; depends=[bbmle fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; + rstpm2 = derive2 { name="rstpm2"; version="1.5.1"; sha256="0p1zqqjss8i5wca4qvr56d6p9ak20ki4cfbxja1wrhkp4kii29r6"; depends=[bbmle deSolve fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; rstream = derive2 { name="rstream"; version="1.3.5"; sha256="1wprsnwl63cc4a6j5h18r09wlh32bq5z6hj6r5klp7rkpjchsplp"; depends=[]; }; rstudioapi = derive2 { name="rstudioapi"; version="0.10"; sha256="15mbw607ncdf53mgga76n3va5zzdcjqz14nb0jcn9axwccqamic0"; depends=[]; }; rsubgroup = derive2 { name="rsubgroup"; version="0.6"; sha256="1hz8rnbsl97ch6sjwxdicn2sjyn6cajg2zwmfp03idzpb3ixlk7l"; depends=[foreign rJava]; }; @@ -12741,21 +12993,22 @@ in with self; { rt_test = derive2 { name="rt.test"; version="1.18.7.9"; sha256="0ywkdjvfzmrmmsfkz4jbhwzbzv7wivx80xy8wr92dch1862h6ias"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; - rtdists = derive2 { name="rtdists"; version="0.9-0"; sha256="14ccpn67xdsx5fhwiw32z55gldzdcpaparqb1zpls2r233wg0v99"; depends=[evd gsl msm Rcpp]; }; + rtdists = derive2 { name="rtdists"; version="0.10-0"; sha256="0dm4nx94xfg6bs7v2m4makk4qx4zw1xh49nihpsaj8vx1ng4lp89"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; rtext = derive2 { name="rtext"; version="0.1.21"; sha256="0j2jfz0mz9552dwa78d527lxipmj5ql8q8np8qq5jw4ka6wj5lbs"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-14"; sha256="1v4vb2ijqlbqcjqdhf85kfzs67whkhm6ygp5cw8xa6qw179vkgd5"; depends=[R_methodsS3 R_oo]; }; rtfbs = derive2 { name="rtfbs"; version="0.3.9"; sha256="02irj6c7nfgp42yb5zdmhbr5pi09xgx0z76d1ccfczjf0r1cyvfz"; depends=[rphast]; }; - rticles = derive2 { name="rticles"; version="0.11"; sha256="1gzbm7hj8xbml1rs2f2g5baqh3g5073j1vjq5l77i90s7gklvh5m"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rticles = derive2 { name="rticles"; version="0.12"; sha256="1zc8cpm3621a9qnwa15clqkn3qf2n55xrj1ncpz6gmcqkw2gxs0g"; depends=[knitr rmarkdown tinytex xfun yaml]; }; rtide = derive2 { name="rtide"; version="0.0.5"; sha256="0ns79xkkl141bbns8zlvx3gf48k4a03qa21pjyhnhgkm9lsihwfc"; depends=[abind checkr lubridate]; }; - rtiff = derive2 { name="rtiff"; version="1.4.6"; sha256="09p4rki1z6zy79z9hb8pajglznnklr4hg7fcyrdxnqs1sjbw1iwy"; depends=[pixmap]; }; + rtiff = derive2 { name="rtiff"; version="1.4.7"; sha256="0l0chjbn8kipnhi37zshphxmxga6id39rm5gzz5gjrv8bnaaxxqb"; depends=[pixmap]; }; rtika = derive2 { name="rtika"; version="1.22"; sha256="1vlv2v7s7p6plahph1wvki68ssyqq8l49brj3pp3r0cnz082askl"; depends=[curl digest rappdirs sys]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.4.0"; sha256="0z6bnzks8mcb871m3z5b3cd883hj1i17swjgly005hvwbvi9h61f"; depends=[changepoint dplyr fs ggplot2 knitr lazyeval lubridate R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; rtk = derive2 { name="rtk"; version="0.2.5.7"; sha256="0h2664z7rbpj0zqnixb5swkkpjbbsgiagmd6dl92k10zphw0c8i0"; depends=[Rcpp]; }; rtkore = derive2 { name="rtkore"; version="1.5.5"; sha256="0srk0ih4gbmhb1pl6zf8sjwrkdmgws9cl1397fcqv6l3bc376622"; depends=[inline Rcpp]; }; + rtmpt = derive2 { name="rtmpt"; version="0.1-17"; sha256="0hp4hia8fp9kbs25hgbjv2nr3h0lkn4v4b0j0c4a9bfm2mrvy0l9"; depends=[coda data_table LaplacesDemon loo stringr truncnorm]; }; rtop = derive2 { name="rtop"; version="0.5-14"; sha256="1wwllckginnzisapbklpsizy47db24r83xahq4qsd8zhqvv9yj33"; depends=[gstat sp]; }; - rtrek = derive2 { name="rtrek"; version="0.2.0"; sha256="0xp97vzbd5lmad7zd1n14y3x6l7kdqrl9kzj5ncmikwxa5iavcn2"; depends=[downloader dplyr ggplot2 jpeg jsonlite magrittr memoise purrr rvest tibble tidyr xml2]; }; + rtrek = derive2 { name="rtrek"; version="0.2.5"; sha256="0b7j0y20damrzih3ibj4jf7gpa0sjqqxh31h9cs6r41mn5m7pyj2"; depends=[downloader dplyr ggplot2 jpeg jsonlite magrittr memoise purrr rvest tibble tidyr xml2]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; rtrim = derive2 { name="rtrim"; version="2.0.6"; sha256="18fvi8zbf9dqwi5x0sgy2aay5565ldvqpispqqb5gx2lwb9qra2r"; depends=[]; }; rts = derive2 { name="rts"; version="1.0-49"; sha256="086zlmcjsv7a38k1jfzq2vhlmx7nivhffcz83i57hl6wbkjl7gv2"; depends=[raster RCurl sp xts zoo]; }; @@ -12774,27 +13027,27 @@ in with self; { ruler = derive2 { name="ruler"; version="0.2.1"; sha256="01b5qn6b69hhl9df6sr187w16z5hj6vxb8yi77y2rghkcrnm12i9"; depends=[dplyr keyholder rlang tibble tidyr]; }; runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; }; runjags = derive2 { name="runjags"; version="2.0.4-4"; sha256="0wqc3kmilvn3szyqvwrvqlins6smpvwv2fj80yflxcr553kph7xd"; depends=[coda lattice]; }; - runner = derive2 { name="runner"; version="0.2.1"; sha256="107mf3c0paxbncfzm4l1xjiig4gl25ww3ncvbs0j6a13q6pfgjif"; depends=[Rcpp]; }; - runstats = derive2 { name="runstats"; version="1.0.1"; sha256="05kaw3wkvr6csaa17ivib0hssh2c4nmmkqyba796zpixwmmmb7wq"; depends=[]; }; + runner = derive2 { name="runner"; version="0.2.3"; sha256="1vnq8lchsffdi8bwi9bv4n6aw2ha1gykwsm0wrm2nhsfp7i1y164"; depends=[Rcpp]; }; + runstats = derive2 { name="runstats"; version="1.1.0"; sha256="0n9348af60j8a2mwgbafabspb4nm45ry92zlzmynja06zyx8lb2d"; depends=[fftwtools]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1.1"; sha256="0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; - rust = derive2 { name="rust"; version="1.3.6"; sha256="1qh7cf9h1v1fhh2cibrz5afdri6zhcdx0nv0d2y2i6mam0xljf6x"; depends=[Rcpp RcppArmadillo spatstat]; }; + rust = derive2 { name="rust"; version="1.3.7"; sha256="0d92vqm7hvdwy0glsjg7l1w324zmnq1igypb7f2ymsj7bls0h61d"; depends=[Rcpp RcppArmadillo spatstat]; }; ruta = derive2 { name="ruta"; version="1.1.0"; sha256="1qr2ryz55h2j3wlwg0535lhmk2ydm0idfxl07rlfxq1pi32cjms1"; depends=[keras purrr R_utils]; }; ruv = derive2 { name="ruv"; version="0.9.7.1"; sha256="1n4q9mrp9f644spbns6bbnzmlabrg90hwkdfg3hnm3rxp9b4xid0"; depends=[ggplot2 gridExtra scales]; }; rv = derive2 { name="rv"; version="2.3.3"; sha256="1h5lhy87v88b70a7pbq5xirskm6ih9fk90n6mzp1nmkr7w1d3zai"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvalues = derive2 { name="rvalues"; version="0.6.3"; sha256="1bsdvwcijb75f27c8padjx8663as667axc4skwa6xgv5y423kbd0"; depends=[]; }; - rvcheck = derive2 { name="rvcheck"; version="0.1.5"; sha256="15222q3sglq0mad5q806p99fhrb96qizmpqw35fa1rb148f95paf"; depends=[BiocManager rlang]; }; + rvcheck = derive2 { name="rvcheck"; version="0.1.7"; sha256="1a3xlzi4n1rqiapfa180aif7n7nws8pbg8k3nk7ccaczvmni38aw"; depends=[BiocManager rlang]; }; rversions = derive2 { name="rversions"; version="2.0.0"; sha256="0mkg9zrjxlbwqzijiysivrs523x48syqj30xdfp88clpkqfk435m"; depends=[curl xml2]; }; rvertnet = derive2 { name="rvertnet"; version="0.7.0"; sha256="01z3ij5z21v901hz4l9173r4pa9jz2nl7bx086ka1bxvcy0dgqgj"; depends=[crul dplyr ggplot2 jsonlite maps]; }; - rvest = derive2 { name="rvest"; version="0.3.4"; sha256="0ji5lk8g1gbv4d9c4jg1fg6rgsqrrwkm05j1id7drdw9kqdifgj1"; depends=[httr magrittr selectr xml2]; }; - rvg = derive2 { name="rvg"; version="0.2.1"; sha256="0j61qlswrivz4a4jx8laprcyfzm867x3qibr65vd0fyvf7m6dl8p"; depends=[gdtools officer Rcpp rlang xml2]; }; + rvest = derive2 { name="rvest"; version="0.3.5"; sha256="0r0a5jic09xw5pk0x42pr99r3zab5m9s4x85ymx1sl769jz42zqf"; depends=[httr magrittr selectr xml2]; }; + rvg = derive2 { name="rvg"; version="0.2.2"; sha256="0f74ja8frkfgb5hhsdydirn7v6hhylmq5wbay9p0z2ac16xrslrd"; depends=[gdtools officer Rcpp rlang xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; rviewgraph = derive2 { name="rviewgraph"; version="1.2"; sha256="0qw1fdfwg2763a1k1qmryblw5rpagsi5p70rs7fj256zfcjvwrz8"; depends=[rJava]; }; - rvinecopulib = derive2 { name="rvinecopulib"; version="0.3.2.1.1"; sha256="093iy7jy7iair3qiqifmbml420bkyzyj8xd09vyffwnw1q3cri1d"; depends=[assertthat BH cctools kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; + rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.1.1.0"; sha256="1616xqchjyqqf2nmgx5rlpnw8g4696lvlpmrx7jav2cnvkff7s2i"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; rvkstat = derive2 { name="rvkstat"; version="2.6.2"; sha256="11jaxmf24rkzmymx5dvfjbw2i6lxw4n4g4f83kpjf2768cvscyp2"; depends=[httr jsonlite RCurl tidyr]; }; - rwalkr = derive2 { name="rwalkr"; version="0.4.0"; sha256="01ia1wkmbigly45kyc1ydrah0yzxlymsnj3vy6wf8ck24lv51dif"; depends=[dplyr httr tidyr]; }; + rwalkr = derive2 { name="rwalkr"; version="0.5.0"; sha256="1sf3f072j8lywik0j8dhnpd34svlv2j4j47nvyym9ykw4w4apm2a"; depends=[dplyr hms httr tidyr]; }; rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; }; rwavelet = derive2 { name="rwavelet"; version="0.4.0"; sha256="0wb3kd97inyh985q1hspnzwxfawfdps43r3zzdpw0jd8sgd7zqxp"; depends=[signal]; }; rwc = derive2 { name="rwc"; version="1.11"; sha256="1qhgkbkp4nz0wq5c4x8232xiszpiyzcdklfgvpnx4cbp3bbfdi4g"; depends=[MASS Matrix mvtnorm raster]; }; @@ -12808,7 +13061,7 @@ in with self; { rwunderground = derive2 { name="rwunderground"; version="0.1.8"; sha256="02p26gkicd5v511kb04p1h3wxj57r7j5vr97n3ibywc6ivz7nqxa"; depends=[countrycode dplyr httr lubridate tibble]; }; rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; }; rxylib = derive2 { name="rxylib"; version="0.2.4"; sha256="0va7kw40nycjn8gh9blzpbph4z319r5a16yim8lwx3hi6rs9myhr"; depends=[BH Rcpp]; }; - ryandexdirect = derive2 { name="ryandexdirect"; version="3.2.1"; sha256="0rfvwi4nhqvifqr54zvin2fzfrhjr6w8jq1srk71mm4mjwvaq37y"; depends=[bitops data_table dplyr httr jsonlite magrittr readr xml2]; }; + ryandexdirect = derive2 { name="ryandexdirect"; version="3.2.2"; sha256="0ga6kx4mpd1dw6b8nbnmc7cly7kcmkplldgdy6jaiz3jmsiy2vgn"; depends=[bitops data_table dplyr httr jsonlite magrittr readr xml2]; }; rym = derive2 { name="rym"; version="0.5.2"; sha256="1j69fmc0wgj8w5y68ix13kh3rsc4blmyc9hsmp41crgr10mi3nvi"; depends=[httr stringr]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; @@ -12816,7 +13069,7 @@ in with self; { rzmq = derive2 { name="rzmq"; version="0.9.6"; sha256="05j34fwwqlzq9nfkaafl39aqc0nvljf22pndqhj151gpnrpgr8w0"; depends=[]; }; s2 = derive2 { name="s2"; version="0.4-2"; sha256="17r3xn2ldlz7qpdwrp0mdm7pfrdfwibyv8biaxq4b6qx0p7wvw6n"; depends=[Rcpp]; }; s20x = derive2 { name="s20x"; version="3.1-28"; sha256="1fx5206gy7cq4n0xrdxcvnd913i08yjjz39ldjm3a98sfz6xj636"; depends=[]; }; - s2dverification = derive2 { name="s2dverification"; version="2.8.5"; sha256="1y4sj5dkjr9kx3m0iwxpsrq7x1rqjfrz2wxbngk1a6qnxyk52aim"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; + s2dverification = derive2 { name="s2dverification"; version="2.8.6"; sha256="1nvmc3mpdqrcnv17vk8rjd7mh55pj68y2ffiia09lc8h84r3zxil"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; }; sAIC = derive2 { name="sAIC"; version="1.0"; sha256="1ih63cfs98kb61gwbmrx2yq7iacb5qa1qrh1a264041qd27r5pj5"; depends=[]; }; sBF = derive2 { name="sBF"; version="1.1.1"; sha256="0dankakl4rwl9apl46hk57ps4mvn2l1crw4gdqds26fc8w6f6rab"; depends=[]; }; @@ -12831,7 +13084,7 @@ in with self; { sValues = derive2 { name="sValues"; version="0.1.6"; sha256="0830f4w6jgpiysk0vz0bxaxwa8m3k94fgj9l3qb42r3jjf9cdn29"; depends=[ggplot2 reshape2]; }; saasCNV = derive2 { name="saasCNV"; version="0.3.4"; sha256="12h5vrl55sb4wmx0hzib5iax8p0q2qzk19h15r0asfkh9l7qz94l"; depends=[DNAcopy RANN]; }; sabarsi = derive2 { name="sabarsi"; version="0.1.0"; sha256="14c94zby3jjm6jr28nrg3qp6r6iw68wsb5l5bpd6jjz9pkljrk9i"; depends=[]; }; - sabre = derive2 { name="sabre"; version="0.3.1"; sha256="0yqw126yr7syjdwq780b395b9qwncqr86vjkmwcvs2w6v1j3nppi"; depends=[dplyr entropy raster rlang sf tibble tidyr]; }; + sabre = derive2 { name="sabre"; version="0.3.2"; sha256="14rvc8in8lfs9vg96jkqm3xg7bszwss5zd78vngp36x4yay007b6"; depends=[dplyr entropy raster rlang sf tibble tidyr]; }; sac = derive2 { name="sac"; version="1.0.1"; sha256="1rl5ayhg5y84fw9w3zf43dijjlw9x0g0w2z4haw5xmxfni72ms8w"; depends=[]; }; saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sadists = derive2 { name="sadists"; version="0.2.3"; sha256="17jlzx5h5l1w7riz0rs99w31n6lxnnxwzbzqn2z5r292j2nxvmkw"; depends=[hypergeo orthopolynom PDQutils]; }; @@ -12846,7 +13099,7 @@ in with self; { safer = derive2 { name="safer"; version="0.2.1"; sha256="1lmhaj9y0hi4ybxfkllxl99vsagcg73sy4kkcmlvn3bs69jky1r9"; depends=[assertthat base64enc sodium]; }; safetyGraphics = derive2 { name="safetyGraphics"; version="1.0.0"; sha256="0vkl31bwh2ishijby2xhp5jcnjxzvy6bsv83f3cfpv4qcw4wbd4k"; depends=[dplyr DT haven htmlwidgets jsonlite magrittr purrr rlang rmarkdown shiny shinyjs shinyWidgets stringr tibble tidyr]; }; salesforcer = derive2 { name="salesforcer"; version="0.1.3"; sha256="1nhw7l6bg375dqqcaxjfvhjm9sb1jsil5wayhffdxc9lqdxrd5a2"; depends=[data_table dplyr httr jsonlite lubridate purrr readr XML xml2]; }; - salso = derive2 { name="salso"; version="0.1.3"; sha256="1skqr5q42xrx9l6jikfvhqqbqjgy2jsp79n1r2z8wj97cw5g30m8"; depends=[]; }; + salso = derive2 { name="salso"; version="0.1.9"; sha256="1an0viw8j1mnafc16hdgiynnaxxvwi3nf4pwaig5zagpzg4kl6im"; depends=[]; }; salty = derive2 { name="salty"; version="0.1.0"; sha256="1dxq62yrkv416fy09l03slc7ci6mnwiyvjlsxhbqnj8yjy3kbhr6"; depends=[assertthat purrr stringr]; }; sambia = derive2 { name="sambia"; version="0.1.0"; sha256="15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln"; depends=[dplyr e1071 FNN mvtnorm pROC ranger smotefamily]; }; samc = derive2 { name="samc"; version="1.0.3"; sha256="1jhlxyh1h4p29axrpncpjhqxaziybf8hpfa52nxgnif0c9hwjn4b"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; @@ -12869,6 +13122,7 @@ in with self; { sandwich = derive2 { name="sandwich"; version="2.5-1"; sha256="1mk685b9wq7k566pbml52rj96i5h6b3vf215k9picgmq296nzvyv"; depends=[zoo]; }; sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; }; sankey = derive2 { name="sankey"; version="1.0.2"; sha256="0jvcr2bn69aklfbgj4hbsrc047mymrx0jmsg26m0g6w7n1igqvcw"; depends=[simplegraph]; }; + sankeywheel = derive2 { name="sankeywheel"; version="0.1.0"; sha256="1sigj4jz13qj4s8vxk0dl2xsddqgyfxabj8yggkasawm7pryvbyy"; depends=[htmlwidgets]; }; sanon = derive2 { name="sanon"; version="1.5"; sha256="1iikm7ivlz87kbq0ax9r1dz29zdq1kmhxd2imzc4hkvr1rwgciv6"; depends=[]; }; santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; }; saotd = derive2 { name="saotd"; version="0.2.0"; sha256="1rhkhsnmh3nf7y0x5sl3mmr5mismz8m92gj0v12niysalcywiarh"; depends=[dplyr ggplot2 ggraph igraph ldatuning lubridate magrittr maps plyr purrr reshape2 scales stringr tidyr tidytext topicmodels twitteR widyr]; }; @@ -12886,7 +13140,6 @@ in with self; { saves = derive2 { name="saves"; version="0.5"; sha256="1b4mfi2851bwcp0frx079h5yl6y1bhc2s8ziigmr8kwy1y1cxw10"; depends=[]; }; saws = derive2 { name="saws"; version="0.9-6.1"; sha256="0w40j6xczqs74z1z3na4510w06px7yn55s2mw9mddd6736l56fv1"; depends=[gee]; }; sazedR = derive2 { name="sazedR"; version="2.0.1"; sha256="1y8vlffvw7ff6j6pqwd0r2zxx1an846znajgcl8mdcbjimvf7fg5"; depends=[bspec dplyr fftwtools pracma zoo]; }; - sbart = derive2 { name="sbart"; version="0.1.1"; sha256="0552dbdj7rm1h7dbl34m4r4disra6x3p919d9c4719ks88i78255"; depends=[LaplacesDemon msm Rcpp]; }; sbfc = derive2 { name="sbfc"; version="1.0.1"; sha256="1xz8h1m5d5ahrz4wsy55amd5mxh3acjs5qmcn7gl6yh3pn0c8phf"; depends=[DiagrammeR discretization Matrix Rcpp RcppArmadillo]; }; sbgcop = derive2 { name="sbgcop"; version="0.980"; sha256="0vmg8b4462qghlyx6hq0raf9xqvygzgwi5y0cbqcljhmbmqjrwxs"; depends=[]; }; sbioPN = derive2 { name="sbioPN"; version="1.1.0"; sha256="0yvg55xnkhm35hfl7rldy2grb26hm4a68jr4x9n45fs7hhdylxri"; depends=[]; }; @@ -12902,7 +13155,7 @@ in with self; { scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4.1"; sha256="1azg1xlid63l9mcyns9yyl3a3hykbl0sl0h5jhyvzjzahfyanq53"; depends=[rJava]; }; scaleboot = derive2 { name="scaleboot"; version="0.3-4"; sha256="16shdj4b8pbdbphqzw7r5xzx6k2qfkr729inv21gkp9qcp4h0vrm"; depends=[mvtnorm pvclust]; }; - scales = derive2 { name="scales"; version="1.0.0"; sha256="0353dkh3d7x78463c6ds80hcml59lrqwr8rlv82a8dnkxla4l7qc"; depends=[labeling munsell R6 RColorBrewer Rcpp viridisLite]; }; + scales = derive2 { name="scales"; version="1.1.0"; sha256="00rdbfj5mwc3kr8pskidn3n2zkp4ms6cx36xazz54pxw3pysdr0y"; depends=[farver labeling lifecycle munsell R6 RColorBrewer viridisLite]; }; scalpel = derive2 { name="scalpel"; version="1.0.1"; sha256="18mapg96xl9a1g85h5xhqsz1333hkc28z0ivfjaff933p1kc6sng"; depends=[gam igraph Matrix protoclust R_matlab SDMTools]; }; scalreg = derive2 { name="scalreg"; version="1.0.1"; sha256="0kfcgl9cpp6g1qx23s1yrjzn0hi74vmrw567vy9wpsmhk04a5bkx"; depends=[lars]; }; scam = derive2 { name="scam"; version="1.2-5"; sha256="0c8pp2cr3khaibpv3m8kkw73q2pdx6931kh8w64s38wgvjv293fp"; depends=[Matrix mgcv]; }; @@ -12912,20 +13165,20 @@ in with self; { scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; scatterD3 = derive2 { name="scatterD3"; version="0.9"; sha256="0miadn406viqzw1sc27fl3xb1l0vvachrfiv72jl9r7qgk2ga5jv"; depends=[digest ellipse htmlwidgets]; }; - scatterpie = derive2 { name="scatterpie"; version="0.1.3"; sha256="1h89dbcnkqc3l1b8rvdcxsw2d2ak2wcvlj7xg3wzgf7pjah1i6g9"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; + scatterpie = derive2 { name="scatterpie"; version="0.1.4"; sha256="0g5sn0iv6c1q7y51j4gbbbnil5089dgk1w4q94c7h5y3x7wfrzqb"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; scbursts = derive2 { name="scbursts"; version="1.6"; sha256="09yxnq6m35xmp0priavjnh0bdcwkr5hhy7j33cz13xwkrd1cgw5j"; depends=[readxl tibble]; }; scclust = derive2 { name="scclust"; version="0.2.2"; sha256="0w0qwz8wfdprs2bgv1cjvd2yb6g12jylad21a9rr3w5bkgxprcrp"; depends=[distances]; }; - sccr = derive2 { name="sccr"; version="1.0"; sha256="1x0ynm64nk1ilknmxgskan8nxymb2y5hmg8i2xw5pbjagyag17lx"; depends=[dplyr]; }; + sccr = derive2 { name="sccr"; version="2.0"; sha256="1r5hmkij73l0z19smq080gr66nnlqk4v5sq0wcmidbxxsjpzwb45"; depends=[dplyr]; }; scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; }; scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; }; scgwr = derive2 { name="scgwr"; version="0.1.0"; sha256="1pyq6qnfhnzbkla1yp49sfkx5y4g26ccgi803axivyjyp5zvwc1b"; depends=[dplyr FNN spData]; }; - schoRsch = derive2 { name="schoRsch"; version="1.6"; sha256="0n6mgw185q0d31sxqvqqxc6w79rybmr66wsaqvcxp8ny13l82lr7"; depends=[]; }; + schoRsch = derive2 { name="schoRsch"; version="1.7"; sha256="19h721v4a7rb1dlkbpb9s24x87fvz3q449ndi0rn0yc0m6mhmcvi"; depends=[]; }; schoenberg = derive2 { name="schoenberg"; version="2.0.2"; sha256="17pbw9266r9lv9blygmvq9285kcrcy07jaqrj3zfa2pg0zyvhjvm"; depends=[crayon]; }; scholar = derive2 { name="scholar"; version="0.1.7"; sha256="142iwrips1589fa0g1178a6s1cz4dfcv9b0qs570q6b6ccfjxi6r"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; - schumaker = derive2 { name="schumaker"; version="1.1"; sha256="09ggzhi60lzqwmc344h6f31zdz0b22mzvj0jpfpdp9lllqb25amf"; depends=[]; }; + schumaker = derive2 { name="schumaker"; version="1.2"; sha256="1whfmnjmib7lh72src7cnbw3mswzaxq8vd50x5x9cv0031n0y6l7"; depends=[]; }; scico = derive2 { name="scico"; version="1.1.0"; sha256="0c52a4mhsd9y5vhz3h6f7j2fa5cq0lkks5qa449w6kra5cqpbx34"; depends=[]; }; scidb = derive2 { name="scidb"; version="2.0.0"; sha256="079akdsxxjnca5jsv0grw1c2nd3dl368xhy4mzm94mh5j6ghi57l"; depends=[bit64 curl data_table digest openssl]; }; scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; @@ -12933,12 +13186,12 @@ in with self; { scio = derive2 { name="scio"; version="0.6.1"; sha256="0h15sscv7k3j7qyr70h00n58i5f44k96qg263mxcdjk9mwqr0y65"; depends=[]; }; sciplot = derive2 { name="sciplot"; version="1.1-1"; sha256="1ydwx9kh778z3x7s3i6gqinqi6bmsf6bslaf0mgszj0nrgcmj6y3"; depends=[]; }; sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; - sclr = derive2 { name="sclr"; version="0.1.0"; sha256="0fl8zqxqfvrcbs1x7lxb99dfl0z6kfka38fvvclkd1agrw2csks9"; depends=[broom dplyr rlang tibble]; }; + sclr = derive2 { name="sclr"; version="0.3.0"; sha256="1qm9jds7kxaz1g6v71z2vfmih2sr4c2n26xxjs6ic9hr9dd15y9y"; depends=[broom dplyr rlang tibble]; }; scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; scoper = derive2 { name="scoper"; version="0.2.0"; sha256="1b4kyrml5yk46fw9hrp21i6w6ylck5qs64y0mzkbqr2wf1x4ncvs"; depends=[alakazam data_table doParallel dplyr foreach ggplot2 Rcpp rlang seqinr shazam stringi stringr]; }; scopr = derive2 { name="scopr"; version="0.3.3"; sha256="1j45l5zcrpc4dnb6ik1v0jlqizpkijl0p656s869jhhvv55r6v2i"; depends=[behavr data_table memoise readr RSQLite stringr]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.2.6"; sha256="18irjp8y8mdn1aiqr50h67w18c3m9yd0ywp5f2vd4l7rw7h5jj23"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx]; }; + scorecard = derive2 { name="scorecard"; version="0.2.7"; sha256="1fp7qd1wy0ki0wwsa2ir0wyqrwjvq5g0b023c5gvzs5y6k7hg4jj"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx]; }; scorecardModelUtils = derive2 { name="scorecardModelUtils"; version="0.0.1.0"; sha256="09znaxrv14m58hsk5pac458xbpcsidc6ygcsw4q9j0p4yd80qbvl"; depends=[car e1071 gbm ggplot2 partykit randomForest reshape2 sqldf stringr]; }; scorepeak = derive2 { name="scorepeak"; version="0.1.2"; sha256="1g9n7kjqb9qk5b7hw8ysrc069w9dzc4z29ay6z1kbm0v4kkzp7bi"; depends=[checkmate Rcpp]; }; scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; }; @@ -12954,18 +13207,18 @@ in with self; { scriptexec = derive2 { name="scriptexec"; version="0.3.1"; sha256="0k10x0npdga1nmchzz9xxv0qijnq2n9pb49z1g06bmva1z8wb4wg"; depends=[]; }; scriptuRs = derive2 { name="scriptuRs"; version="0.1.0"; sha256="1wbvfqcc0raazhdc6pyp93q859ilxfz9rz338p3sb7fjyxvparbl"; depends=[]; }; scrm = derive2 { name="scrm"; version="1.7.3-1"; sha256="090gsa23l9s4x92q4n7ggp491fc8ghgnjw5p7j67gd1i1iwr55n8"; depends=[Rcpp]; }; - scrobbler = derive2 { name="scrobbler"; version="0.1.0"; sha256="166ria9pw1v8ky4975xb0jhqrl9jr3y95p7jl8bsmsgyii6lxcia"; depends=[anytime]; }; + scrobbler = derive2 { name="scrobbler"; version="0.2.12"; sha256="0zqz5hpq9kabcz2q0zdmbygwj9xgdvs9mmv5k6h4gdbfjbzl4fiy"; depends=[anytime httr jsonlite]; }; scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; }; scrypt = derive2 { name="scrypt"; version="0.1.3"; sha256="14iblgbp9v2by8fjbrpsd59iknp5babcz7j3yv1yxxzcwyb6wrrm"; depends=[Rcpp]; }; - scs = derive2 { name="scs"; version="1.2-3"; sha256="0kljqx0f6x1s98896vwckd3yhmzrilh3k27mvmyvw8nxadkapys7"; depends=[]; }; + scs = derive2 { name="scs"; version="1.3-2"; sha256="10z5619gbnnygk8pkdx2qji56jlv1q6c1z4581pdkd9sfnhg1yp3"; depends=[]; }; sctransform = derive2 { name="sctransform"; version="0.2.0"; sha256="1r5kiqqs318q59h2i8m7c6nhghp9w6q26ss2y5a390lkhsawgx6p"; depends=[future future_apply ggplot2 gridExtra MASS Matrix Rcpp RcppEigen reshape2]; }; scuba = derive2 { name="scuba"; version="1.9-1"; sha256="1b92b6p9dn54rmcaw2ng41pvvvkmrzgg12d6zcr3yh8qgi89pvdi"; depends=[]; }; sdPrior = derive2 { name="sdPrior"; version="1.0-0"; sha256="0g4crlasnvxz752n3az5jc681jvvj2g87c3a8s2h1i2vh64p5h37"; depends=[doParallel GB2 MASS mgcv mvtnorm pscl]; }; sdStaf = derive2 { name="sdStaf"; version="1.0.2"; sha256="0r7lqj30r3f0b18kpahi63zsdizcw2zjf1vvvs04s4cg1djjbcp3"; depends=[dismo dplyr ggplot2 raster rasterVis rgdal rgeos sp tidyr]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; - sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.18.1"; sha256="0k7kks4kg62pk00zs7y5gbikaz2fpgkldw9p5jzhghdlkykz03xw"; depends=[cli data_table jsonlite rlang shiny shinyjs shinythemes shinyTree]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.4.0"; sha256="0qh9rcjg5pbq2lnymjzf5xh3h22f0j30xmq5hqsk9lkhr863mbn6"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; + sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.18.2"; sha256="09f9b6padx6jsjhh0d7qa7qs99rar4j9fbmyp9569ywc9ld7z7mm"; depends=[cli data_table jsonlite rlang shiny shinyjs shinythemes shinyTree]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.5.0"; sha256="0qskj65994kmv1s0rpz1a4dvlji1s4sn3y6lfqsh1zdf6lfdvhpn"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; sdcSpatial = derive2 { name="sdcSpatial"; version="0.1.1"; sha256="1szv2nb758k3x5scxml2ns11fi99rlmd11r3fhzy3dgylf0m0xnm"; depends=[raster]; }; sdcTable = derive2 { name="sdcTable"; version="0.30"; sha256="1sbdnm2na36jx76hcpfks3kr5milid5sn0cpzjky90ldfii2pqf9"; depends=[data_table knitr lpSolveAPI Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; @@ -12993,14 +13246,14 @@ in with self; { seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seastests = derive2 { name="seastests"; version="0.14.2"; sha256="04kx4sijnpsarq4iaclxvckgr5y0gmz5a0fmkkqjmfi3hm1kvw3d"; depends=[forecast xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; }; - secr = derive2 { name="secr"; version="3.2.1"; sha256="1612zbbpcm5xbvki7qz1jsk09wdxf64285f87a3dmh1479fnc16q"; depends=[abind MASS mgcv nlme raster sp stringr]; }; + secr = derive2 { name="secr"; version="4.0.2"; sha256="07b8prqx9yy9k2pzm69mf6lahcwzb6z8x52bgph6ljxwji53vyk6"; depends=[abind MASS mgcv nlme raster Rcpp RcppParallel sp stringr]; }; secrdesign = derive2 { name="secrdesign"; version="2.5.7"; sha256="064c9vwcn0pn0hd461j60fzzc21k22gqlm5zcsz2qqvv5c64ynic"; depends=[abind openCR secr]; }; secret = derive2 { name="secret"; version="1.0.0"; sha256="09b28f7ndc167bbanbdydralykq718fixnrgs5xr9d3fbdhz1vdl"; depends=[assertthat curl jsonlite openssl rprojroot]; }; secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; }; secsse = derive2 { name="secsse"; version="2.0.0"; sha256="0qsbn56vc6y19hmc94bimv1mf86ayxa8rj38qvvsxjfm9czmw2ac"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; secure = derive2 { name="secure"; version="0.5"; sha256="16pv5m7rrcs8hcjj3kylq7smyzf2qk8rkg9m1b421w0ac7lg04x1"; depends=[MASS Rcpp RcppArmadillo]; }; securitytxt = derive2 { name="securitytxt"; version="0.1.1"; sha256="0yrydcc68qcsq5wrdfgwfi347pdd0zc8hp2ikmw3iz31anm3b4yw"; depends=[Rcpp]; }; - see = derive2 { name="see"; version="0.2.1"; sha256="0c4hw3x30zip8rp04knw07b3cvczfkpx7zi7m6n411d5bl90xiij"; depends=[bayestestR dplyr ggplot2 ggridges gridExtra insight magrittr rlang scales]; }; + see = derive2 { name="see"; version="0.3.0"; sha256="0qcnfv2v7p2day4p6839jlwf6jr9ls8049zw9qfl0xynxnxz66s1"; depends=[bayestestR dplyr effectsize ggplot2 ggridges gridExtra insight magrittr parameters rlang scales]; }; seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; seedCCA = derive2 { name="seedCCA"; version="1.0"; sha256="1grs6ykiyp8p5gh93hgb4niggppbh2wzwl6yx0l1qs9fkcz5zvy7"; depends=[CCA corpcor]; }; seedwater = derive2 { name="seedwater"; version="1.0"; sha256="0qqhjax16lnyriv6q9n89g93bs1zy8xwx9jp0xbilba7djzjh33g"; depends=[rpanel tkrplot]; }; @@ -13022,12 +13275,13 @@ in with self; { selectapref = derive2 { name="selectapref"; version="0.1.1"; sha256="0pn0s8dxbshwmv0qdrf670cjk3inf5w7jgac3fq29gmcx4f3fhl2"; depends=[]; }; selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; selectiveInference = derive2 { name="selectiveInference"; version="1.2.5"; sha256="07kzpvdmflca1sriqfzn20f84fx2b9kwwiqm91lqjpx854bsx5kh"; depends=[adaptMCMC glmnet intervals MASS Rcpp survival]; }; - selectr = derive2 { name="selectr"; version="0.4-1"; sha256="1jp27rxks4w29l47k42869hp8hnkzq2rnvsqbr44wd19fqb2zm4b"; depends=[R6 stringr]; }; + selectr = derive2 { name="selectr"; version="0.4-2"; sha256="09y1n3iy297g49xlpl7xrjpwgnm57pskx5991lyfcpizbz8ax22m"; depends=[R6 stringr]; }; selectspm = derive2 { name="selectspm"; version="0.2"; sha256="0wvhlzhl0janhms107xczmilpmr4y26jgk0ag3g34iqba7fbnfqd"; depends=[ecespa spatstat]; }; seleniumPipes = derive2 { name="seleniumPipes"; version="0.3.7"; sha256="1krpzh2gy3yl07c2n1d8q21xjc2qcv5ac1kv7212710bxkdyfad6"; depends=[httr jsonlite magrittr whisker xml2]; }; selfea = derive2 { name="selfea"; version="1.0.1"; sha256="0zyxbd5vg8nhigill3ndcvavzbb9sbh5bz6yrdsvzy8i5gzpspvx"; depends=[ggplot2 MASS plyr pwr]; }; selfingTree = derive2 { name="selfingTree"; version="0.2"; sha256="18ylxmg2ms4ccgm4ahzfl65x614wiq5id7zazjjz5y75h8gs7gzj"; depends=[foreach]; }; sem = derive2 { name="sem"; version="3.1-9"; sha256="1f9c6g6pfx66gd2pappcsqh484ah6a0x4z47hpd46rah0817hcsa"; depends=[boot MASS matrixcalc mi]; }; + semEff = derive2 { name="semEff"; version="0.1.0"; sha256="0mch1xzm4j2i612qs6002756zzdl7wmrgjmlp047dpa89dlp2yly"; depends=[boot lme4]; }; semPLS = derive2 { name="semPLS"; version="1.0-10"; sha256="0q5linjyv5npkw4grx3vq58iq2q1grf06ikivhkg8w7rvb7pqn6b"; depends=[lattice]; }; semPlot = derive2 { name="semPlot"; version="1.1.2"; sha256="0l1v9yi1pv59iwfknw4dh9qskk5y8r347jq1vq13gnfd3bmd71xr"; depends=[colorspace corpcor igraph lavaan lisrelToR OpenMx plyr qgraph regsem rockchalk sem XML]; }; semPower = derive2 { name="semPower"; version="1.0.0"; sha256="0wciz5qrd40q4mxq96pibnya11ac42n37c9xhjd4zfhznhjz06bb"; depends=[]; }; @@ -13043,13 +13297,14 @@ in with self; { semsfa = derive2 { name="semsfa"; version="1.1"; sha256="1k6i1m4r9y7j85rlrsgfjm8w15ax4xgf70xyvqwsszmf9950ldxx"; depends=[doParallel foreach gamlss iterators mgcv moments np]; }; semtree = derive2 { name="semtree"; version="0.9.13"; sha256="0am7fm7f9kgq6kmd17axrswlg191ny3pq6b5sf731diz1ghyncmp"; depends=[bitops cluster digest OpenMx plotrix rpart rpart_plot sets stringr]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; + sen2r = derive2 { name="sen2r"; version="1.2.1"; sha256="19rzh7xxq6b9rbiqmmk4rwh5x0w3h8p8yk7c3111fggm67jy62dv"; depends=[data_table doParallel foreach geojsonio httr jsonlite leaflet leaflet_extras magrittr mapedit raster reticulate sf shiny shinydashboard shinyFiles shinyjs shinyWidgets stars units XML]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; sensR = derive2 { name="sensR"; version="1.5-1"; sha256="0hqnk6gvlkl9harz7rh5ikbp0s0vjwi63gxixqjfhkyk02ilaa3z"; depends=[MASS multcomp numDeriv]; }; sensemakr = derive2 { name="sensemakr"; version="0.1.2"; sha256="0p5rh511fymbh8vkfwdv62xxwflkmrqwas1b16m0hlzjwyzdn03m"; depends=[]; }; sensiPhy = derive2 { name="sensiPhy"; version="0.8.3"; sha256="03qrxal0wvgiyr5vnnzc8n95h4460p11idnmr6vnr73c5f8q905h"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; sensibo_sky = derive2 { name="sensibo.sky"; version="1.0.0"; sha256="0s8gbj7qrcbcnflp7v0s93ykh2xgk7jwpyvzndj1f90hjy20x3bc"; depends=[glue httr jsonlite]; }; - sensitivity = derive2 { name="sensitivity"; version="1.16.1"; sha256="1qzkj0bzyyh42n40a6ihzs08bngrd8bq62rssrgzj7vfs7a14wi3"; depends=[boot ggplot2]; }; + sensitivity = derive2 { name="sensitivity"; version="1.16.2"; sha256="1y9w7vxzkw0rx6sbgvs5b0czmksqxcf1c6iycmw6yf4hgwjf5clm"; depends=[boot ggplot2]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityCalibration = derive2 { name="sensitivityCalibration"; version="0.0.1"; sha256="1fn07dra7dhpsg6f1yn1ayfpmvwaxma8cps94070nrpfwmdvi04g"; depends=[ggplot2 ggrepel plotly relaimpo splitstackshape stringi]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; @@ -13063,12 +13318,12 @@ in with self; { sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; sentimentr = derive2 { name="sentimentr"; version="2.7.1"; sha256="13myh7w9pynmgvqspsxpnj8mz8jz8nwkwjyax4hahvwb9707hf2s"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.7.0"; sha256="08vpjpbcyp4r8psi06ql6zij51r1cp2hz45r007r1lz151pd043y"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; + sentometrics = derive2 { name="sentometrics"; version="0.7.6"; sha256="1yjli4lkh164m68qhf5fnz7gvv0wpxb4cwx9vqc3n75m7ybc45vw"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; }; seplyr = derive2 { name="seplyr"; version="0.8.4"; sha256="18z3nfxghzzcn23ilgsimbxz8mqi3q45i7b3ihdmkllc3ln1f0vk"; depends=[dplyr rlang tidyr wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2.1"; sha256="176ggpdcgmpsjixmz0ldknyd0vw120kjyrid3bq2bn4cgkwzb74z"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.2"; sha256="10p8ldj83mvhpcz1yas4xns5qh8zbs533na8nv87phngi8dsb76m"; depends=[survival]; }; - seqHMM = derive2 { name="seqHMM"; version="1.0.13"; sha256="1kg0vjwbmapvrwh0cn2rfzsbkp8f2l0hlaw4qd5hxjij177h0whx"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; + seqHMM = derive2 { name="seqHMM"; version="1.0.14"; sha256="0ybdp5364jddakkd7rawrfk87hn30fgjpsirlz2440w600m69ydr"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; seqICP = derive2 { name="seqICP"; version="1.1"; sha256="1dfhl7g47icjw38p9c0hyvnn3pwzw7pndywk22vgcyfhiz23xjcp"; depends=[dHSIC mgcv]; }; seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; @@ -13102,7 +13357,7 @@ in with self; { sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; sfdct = derive2 { name="sfdct"; version="0.0.6"; sha256="0ilh89mfwp1yqn44yn80vz1a6g65hryk6w87ngzvak3pd6jxq6aa"; depends=[dplyr RTriangle sf sp tibble]; }; - sfheaders = derive2 { name="sfheaders"; version="0.0.1"; sha256="1zx3kqx8p9mhmxlhh39i0lp9lnwl6khn1phm7rl4capfa9d7ry0p"; depends=[Rcpp]; }; + sfheaders = derive2 { name="sfheaders"; version="0.0.2"; sha256="1bl76g27kv8szivxrp8pki7z16ghk9v50nhwbkl2x66r9d6n778x"; depends=[Rcpp]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; sfsmisc = derive2 { name="sfsmisc"; version="1.1-4"; sha256="0zaw617zarmwir8l60riky0z6r1j3mwfnm1f32vqcbljb74akdj4"; depends=[]; }; sft = derive2 { name="sft"; version="2.2-1"; sha256="0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33"; depends=[fda SuppDists]; }; @@ -13115,30 +13370,30 @@ in with self; { sglasso = derive2 { name="sglasso"; version="1.2.3"; sha256="1xf4jni7gybk66wp542p92jxrp4lf63ypbwsnb3av5db04bis7ll"; depends=[igraph Matrix]; }; sglg = derive2 { name="sglg"; version="0.1.5"; sha256="0b2lksn887h92y8l1gjmhm2pxzfn6kk0rjvyh9k2b1j4plkvp73b"; depends=[AdequacyModel Formula ggplot2 gridExtra moments robustloggamma ssym survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; - sgmcmc = derive2 { name="sgmcmc"; version="0.2.4"; sha256="1bivg3rw5c98355z4d596pwf4ciibbrmr3ay2ixj16dqd7g23j94"; depends=[reticulate tensorflow]; }; + sgmcmc = derive2 { name="sgmcmc"; version="0.2.5"; sha256="0lq79c7i6bklh8c63wx3k6h9mk8s1abbr0hc41drcm96bbbg0aal"; depends=[reticulate tensorflow]; }; sgmodel = derive2 { name="sgmodel"; version="0.1.0"; sha256="03s9z7n7w3pys5dp1z5x91bszgv3q1sax5z591dz9rvmn5glp2lj"; depends=[ggplot2 ramify Rtauchen tidyverse]; }; sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; shades = derive2 { name="shades"; version="1.4.0"; sha256="1zg95sjhrfvbdlfc387g9p0vnb8nb6agdk1mb3wq3kwkm2da0bqj"; depends=[]; }; - shadow = derive2 { name="shadow"; version="0.6.2"; sha256="10azq8w2hwd2ff2yvl81jrfsfqjq1qb6dqkhvkb7xnnwmd4488bs"; depends=[plyr raster rgeos sp]; }; - shadowtext = derive2 { name="shadowtext"; version="0.0.6"; sha256="1cx9wdx99n9k8ysf947vkxry27rvjs24yhg8yqygs84z5rjaahzp"; depends=[ggplot2 scales]; }; + shadow = derive2 { name="shadow"; version="0.6.3"; sha256="0xm3d3x02z2lk1n9z5ny7cdybyvxxznwrfn76nk1jx5dshqhrwpr"; depends=[plyr raster rgeos sp]; }; + shadowtext = derive2 { name="shadowtext"; version="0.0.7"; sha256="1s1ip8zfr684a3ld7hvf524bhn2j31k6d1wbhh1ni0flsggv2ckf"; depends=[ggplot2 scales]; }; shallot = derive2 { name="shallot"; version="0.4.7"; sha256="0lvvnia3yngywp7gm68kdwgfmvag4llhzim8nqcbl6iq52lvlj2g"; depends=[commonsMath rscala salso]; }; shape = derive2 { name="shape"; version="1.4.4"; sha256="0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; - shapes = derive2 { name="shapes"; version="1.2.4"; sha256="1zqykhx8rz1k2ahi2lmmzll1c8k0as6vw4gbd3rpfb5fvpni3ni0"; depends=[MASS minpack_lm rgl scatterplot3d]; }; + shapes = derive2 { name="shapes"; version="1.2.5"; sha256="0gfpdydfysp5mwg7qmkn73s67gvh2szb40mzqrx97h41ijgcgd8s"; depends=[MASS minpack_lm rgl scatterplot3d]; }; shapper = derive2 { name="shapper"; version="0.1.2"; sha256="0z2ad0hk1gwxbr4kqbk26lzl25hrcifcp92i3am5j6y0ys71dwsx"; depends=[ggplot2 reticulate]; }; - shar = derive2 { name="shar"; version="1.0.1"; sha256="0qpjmxdfp08lqhn70nh4728scm1ah93qpdyg3215640b3js0d3ik"; depends=[classInt raster Rcpp spatstat]; }; + shar = derive2 { name="shar"; version="1.1"; sha256="157b1pia21qygb7pqb97v8b3bklnfq40xf8y7wg6p2ixkab0ws6c"; depends=[classInt raster Rcpp spatstat]; }; sharpData = derive2 { name="sharpData"; version="1.2"; sha256="0pvaq8i1vrra3d0wf6yyqkbin0zgsd1kvdzh4bfnyps6pzn5k789"; depends=[KernSmooth quadprog]; }; sharpeRratio = derive2 { name="sharpeRratio"; version="1.1"; sha256="0rgsad8idhjyjgwlzk358jlqkqf6sk7g6vl3fchkamjzxnhbb8p9"; depends=[ghyp Rcpp]; }; sharpr2 = derive2 { name="sharpr2"; version="1.1.1.0"; sha256="1r7anfr296l5sbhgry6rb15hlca6mpcm24qssdzz9bckavyfvqgi"; depends=[Matrix mvtnorm]; }; - sharpshootR = derive2 { name="sharpshootR"; version="1.0"; sha256="1x9cava7b9lg8qpmjqlbkqmpc9a2dn8k4kl71s4himr4wzp9z4y3"; depends=[ape aqp circular cluster digest Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp vegan]; }; + sharpshootR = derive2 { name="sharpshootR"; version="1.5"; sha256="1r9pmrbdbncph1xjvwa29pzfw0xvw0p0giy098jswiyzfipsjv6k"; depends=[ape aqp circular cluster digest e1071 Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; shazam = derive2 { name="shazam"; version="0.2.1"; sha256="1qqrjddkj29b7c9vgc2x4w6ya0gilgc983sqbgmm60ljl1ihl958"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales SDMTools seqinr stringi tidyr]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.5"; sha256="18y2qzqx8hd6yph1wnsq4ygm16pcdszynh174xsrxrhvx2h9mi4x"; depends=[]; }; - shiny = derive2 { name="shiny"; version="1.3.2"; sha256="0ky2w2f1lgak2q5a3ym44g0mlna7j8vw25g8yr2shv0rdjp53f18"; depends=[crayon digest htmltools httpuv jsonlite later mime promises R6 rlang sourcetools xtable]; }; + shiny = derive2 { name="shiny"; version="1.4.0"; sha256="0jvcxs0vdxdlbriahxjzzcmg8v8if21k3xvdgk59iskw71ch81qc"; depends=[crayon digest fastmap htmltools httpuv jsonlite later mime promises R6 rlang sourcetools xtable]; }; shiny_i18n = derive2 { name="shiny.i18n"; version="0.1.0"; sha256="15llwr4yrx6rlk32b92wcq3dn360y5cvy4mh2aqkza9ikcvlhcvv"; depends=[jsonlite yaml]; }; shiny_router = derive2 { name="shiny.router"; version="0.1.1"; sha256="0biwni6bk39qafvsh8w32crlgm4hf8r9kwkmnlc3w5za2x2fja4c"; depends=[magrittr shiny]; }; shiny_semantic = derive2 { name="shiny.semantic"; version="0.2.1"; sha256="0m0f22qlmf7f2cf33myn72dm48yslqyx4kwzb96i78a3yz6a2awp"; depends=[htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; @@ -13148,29 +13403,30 @@ in with self; { shinyEffects = derive2 { name="shinyEffects"; version="0.1.0"; sha256="03fm2i1ydlp90w299nvz7dqs9724g0m2f0bc44ni8m2gz9cfpccs"; depends=[htmltools shiny shinydashboard]; }; shinyEventLogger = derive2 { name="shinyEventLogger"; version="0.1.1"; sha256="1piycfg9j0dg3fgq9f88gs7zvhldmrzn7ggy2ijbh6r7iwipwgdm"; depends=[bupaR jsonlite mongolite purrr R_utils shiny stringr]; }; shinyFeedback = derive2 { name="shinyFeedback"; version="0.1.0"; sha256="01qp75c5dsvc4xs1id1yhn81gmjl0hnjz8msf8mkvf4ifqal563f"; depends=[digest shiny]; }; - shinyFiles = derive2 { name="shinyFiles"; version="0.7.3"; sha256="01as3l9ffj5dwac0vviais2x5l3027zxlj67kcvkdwxaj5hql33i"; depends=[fs htmltools jsonlite shiny tibble]; }; + shinyFiles = derive2 { name="shinyFiles"; version="0.7.5"; sha256="1143m941hma9hc77c3xcw26c0ygfhn9ii2sbp9wrydxv4gc7mr8a"; depends=[fs htmltools jsonlite shiny tibble]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; }; shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.2"; sha256="1sjcll10ciq6pj9h8c6ybjqp8763wc423hddlalcblxxpajf6avz"; depends=[shiny]; }; - shinyML = derive2 { name="shinyML"; version="0.1.1"; sha256="16agyfss9zxigi34qz9823rdfzzi20174ssb3mk3la7rcdpb8chr"; depends=[data_table dplyr DT dygraphs ggplot2 h2o plotly shiny shinycssloaders shinydashboard shinyWidgets sparklyr tidyr]; }; - shinyMatrix = derive2 { name="shinyMatrix"; version="0.2.0"; sha256="10l85263xkj9mgx8ylpabq8319qlzd712bb46qc50rl7x10k7piz"; depends=[jsonlite shiny]; }; + shinyML = derive2 { name="shinyML"; version="0.2.0"; sha256="1x7fshfq85cbaydhhqx1lcfybv6qlrc6rmajsbcvvnbnbp1m5ysb"; depends=[data_table dplyr DT dygraphs ggplot2 h2o plotly shiny shinycssloaders shinydashboard shinyWidgets sparklyr tidyr]; }; + shinyMatrix = derive2 { name="shinyMatrix"; version="0.3.0"; sha256="0gakbwfrqyxbm946rgxk3xc4qh4i3631hg8q37058ji63bxqzadc"; depends=[jsonlite shiny]; }; + shinyMobile = derive2 { name="shinyMobile"; version="0.1.0"; sha256="1jk4dpg78qxpsqnj44ia3z668bhf8mfziiz8v4zp7mmpp7x5447b"; depends=[htmltools jsonlite magrittr shiny]; }; shinyMolBio = derive2 { name="shinyMolBio"; version="0.2"; sha256="09lq5pvis450il1agcq5n9cilnq84rfv08w2dz1d0bbq1qgrgnvg"; depends=[checkmate dplyr plotly purrr RColorBrewer RDML shiny stringr whisker]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="1.0.1"; sha256="1d830wf7d5ki7frbr1vgy9d0vllyfcylq7pfkspjkz64b2xfhah3"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.7"; sha256="0jfx2capckv7hf2yx3fn8i4rcmhi222ah91jnmhg497x8wgz31s3"; depends=[htmlwidgets jsonlite promises shiny stringr]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.9"; sha256="1yxmqvq96hhbnvwsaf7cpp2947bxww5ap3jlz7sjch8jrkwlb4cl"; depends=[htmltools jsonlite scales shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.5.0"; sha256="111w6f23m16w6zb5bg85brg90gsyw50rad6c4qqm1y5k3ny1gzgb"; depends=[htmltools jsonlite scales shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; }; shinyanimate = derive2 { name="shinyanimate"; version="0.3.0"; sha256="0vshid5mfq006cprjj61d0g7ajyc3plc66x55c5jjmijwbp6pw7a"; depends=[shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; - shinybusy = derive2 { name="shinybusy"; version="0.1.3"; sha256="0drkxw1vnhkii12vv8b2k8j3d7mg93dg8iz097a38sd6l7i3wxfj"; depends=[htmltools jsonlite shiny]; }; + shinybusy = derive2 { name="shinybusy"; version="0.2.0"; sha256="1zhi4nfnwwxn25r47fa8c5dq0wfvxmmdzrr8vfiq3qjj46bi1alf"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="0.2.0"; sha256="1bpzsm7m7c366sjl1qndp4m5dg2vlm68rjgdy9n1ija9xbp0r2g4"; depends=[digest glue shiny]; }; shinycustomloader = derive2 { name="shinycustomloader"; version="0.9.0"; sha256="1klx71vr26g0gjf6hbiia1qidqii5d467i1sdjvlrg1hxdcggqff"; depends=[glue shiny]; }; shinydashboard = derive2 { name="shinydashboard"; version="0.7.1"; sha256="0khac8b27q3swdw07kl609hm0fjfjsjv591b388q99mqqr2rk92i"; depends=[htmltools promises shiny]; }; shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="0.7.0"; sha256="0hxg9gxravalfbrh05jixk9pz1qsq92pspysgx0vn2smgvp7rzlb"; depends=[htmltools shiny shinydashboard]; }; - shinyglide = derive2 { name="shinyglide"; version="0.1.1"; sha256="1jl48s4pl0f69j3gg9y1zpxnx0l4p6f4czjr27g6cs9y780z3r96"; depends=[htmltools shiny]; }; - shinyhelper = derive2 { name="shinyhelper"; version="0.3.1"; sha256="1z3wb3vdpz9pcn6rfmpbxky05cf8bxldhpwzldrmhn03spz3n987"; depends=[markdown shiny]; }; + shinyglide = derive2 { name="shinyglide"; version="0.1.2"; sha256="0i98k3gl83kfzp3vs1his05idhwj1n0bw98ik7d62cgn4rqi6ar4"; depends=[htmltools shiny]; }; + shinyhelper = derive2 { name="shinyhelper"; version="0.3.2"; sha256="1c4hvf19j3yyh8r12nx85ldkxs89g98q74csnqs5ml5l79a65vgp"; depends=[markdown shiny]; }; shinyhttr = derive2 { name="shinyhttr"; version="1.0.0"; sha256="1l02g0qgvycwpfr6wl7svnms128fhlzbn9p7i4mr7ghgsd5qr58a"; depends=[shinyWidgets]; }; shinyjqui = derive2 { name="shinyjqui"; version="0.3.2"; sha256="1a73vsq1wc3xf14y64hkgnk5jgxj98b8aj3g0fs7mgayar3an5g0"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="1.0"; sha256="113zpijri0l80rlgrvqn6bxk0sdqgl79h7yhja2p76f9dc9i2sr8"; depends=[digest htmltools jsonlite shiny]; }; @@ -13185,13 +13441,14 @@ in with self; { shipunov = derive2 { name="shipunov"; version="1.3"; sha256="0bja3gb837ccyqxncm666749abnlr8bn88k788x0z4mnc8x32zak"; depends=[]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="1.0.0"; sha256="05hih1v5vvr7vmwarizsdx8517g74s96fdsz3klcz3g12idx1nqn"; depends=[curl jsonlite R6]; }; + shortcuts = derive2 { name="shortcuts"; version="1.3.0"; sha256="0y35civsrm8lc508khiwg5igzl1xb141p8012d9civ3pvv7i5vd7"; depends=[rstudioapi]; }; shotGroups = derive2 { name="shotGroups"; version="0.7.5.1"; sha256="0il6hlv2hnfx5rmj3vk3q9p24xqii77z6hdz5fsgyh4i3kgcyrjy"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; showtext = derive2 { name="showtext"; version="0.7"; sha256="1ihgqzfia36b0n9aa41p1w98wxxvs1lxh1zz0570hbfqmph1sk73"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-5"; sha256="1l9mg98hkb0bvr5dzd2p26g8mw5hqjxrym2gmbm10kyapvccfk56"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; - shrinkTVP = derive2 { name="shrinkTVP"; version="1.0.2"; sha256="0psn20a68fvmr8d94jjvrqhngkzdrqpgq0rr6fz3jximy4856437"; depends=[coda GIGrvg Rcpp RcppArmadillo RcppProgress stochvol]; }; + shrinkTVP = derive2 { name="shrinkTVP"; version="1.1.1"; sha256="0dl6dpbjq6ykh813344qs3n6kp8xgif354wjz7lzv1ik4kl3a71s"; depends=[coda GIGrvg Rcpp RcppArmadillo RcppProgress stochvol zoo]; }; shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; shuffleCI = derive2 { name="shuffleCI"; version="0.1.0"; sha256="1n9k28m1fcnw1my9a7v0gy9waygd48lab45vj9k2wwijbc325zai"; depends=[plotrix]; }; shutterstock = derive2 { name="shutterstock"; version="0.1.0"; sha256="1vqbrjbwl2gdcf607f51cdzkjbkmk11n08mzx01j7bwcd278ny8r"; depends=[httr jsonlite]; }; @@ -13213,29 +13470,30 @@ in with self; { signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.5"; sha256="1d4v6cbvcbi8pb5zmn58s01h3jb0kv7yr7qvcnx4p2v82knvhik7"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; - signs = derive2 { name="signs"; version="0.1.0"; sha256="1kkm8gxwgvbkjz5pvscj7x9c88acara4qnzg311va9fd43li55h8"; depends=[rlang scales]; }; + signs = derive2 { name="signs"; version="0.1.1"; sha256="1pcn5pf3gc8fl5nrfjqafx1ap9s23q7kqnxwkknqbabqhl7d1453"; depends=[rlang scales]; }; sigora = derive2 { name="sigora"; version="3.0.5"; sha256="1240q42kpb4l1idanywzal7c85kp3ncdl5m2irh8qs5xrs02gdc7"; depends=[]; }; sigr = derive2 { name="sigr"; version="1.0.6"; sha256="01crx8r9bcq1kwlq66vypnv1r48fp3hbl06ykd8g2k5zm06w0yyi"; depends=[wrapr]; }; siland = derive2 { name="siland"; version="1.2"; sha256="1njn5a4gr4rpf8xwbfvxiyg7h64pfzxijakn9sbhb1agspn5z1zz"; depends=[ggforce ggplot2 lme4 raster rgdal sp]; }; + silicate = derive2 { name="silicate"; version="0.2.0"; sha256="19386cd46jil4fhs6340wbk96igi9jlfgghbm88c0j5ff4ah1bsj"; depends=[decido dplyr geometry gibble gridBase magrittr purrr rlang tibble tidyr unjoin]; }; sim1000G = derive2 { name="sim1000G"; version="1.40"; sha256="1avq6xfc34izavvp9vb5ccc2b9nc4m7cwr06ygnsmpgwi5nswbb8"; depends=[hapsim MASS readr stringr]; }; simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; simExam = derive2 { name="simExam"; version="1.0.0"; sha256="10p3y67cli5is2gj23cjy8y7zpbnn2jbxmfiq01ls0hc1jind82w"; depends=[Matrix msm]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; - simGWAS = derive2 { name="simGWAS"; version="0.2.0-2"; sha256="1228kbcsv16gmdl3rv816547bkn1nlj5pyipfwbcf3g6ll2x4pk0"; depends=[combinat corpcor dplyr mvtnorm Rcpp]; }; simIReff = derive2 { name="simIReff"; version="1.0"; sha256="0yi43splda8chnh4bq5x6chbrl5c0y9sv1k2m31763da0czayall"; depends=[bde extraDistr ks MASS np rvinecopulib truncnorm]; }; simLife = derive2 { name="simLife"; version="0.5.2"; sha256="1dhrjszfgxr0j4dkc2bwykyj515ji5rkb572nmnyjgkyi652j01v"; depends=[splancs]; }; simMP = derive2 { name="simMP"; version="0.17.3"; sha256="1pzg79dd08ds3pfzxnk9h95gaibicv00mnm0jb4i8v5is4gzrdhr"; depends=[Biostrings BSgenome doParallel foreach GenomeInfoDb GenomicRanges IRanges XVector]; }; simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; - simPATHy = derive2 { name="simPATHy"; version="0.2"; sha256="0ai5wmjz8k0glbwkclgg3m3ncsjghja4iys2mn1psn3r8gxk79yc"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; + simPATHy = derive2 { name="simPATHy"; version="0.3"; sha256="09ss23sh90b8ggmw26pldx3jnbvh9l0rr27268xf4sri013y7hiq"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; simPH = derive2 { name="simPH"; version="1.3.10"; sha256="0br32m28ynmhr4xal69bsv925rlmih898rk5bskn1s6bhsshalqq"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; simPop = derive2 { name="simPop"; version="1.2.0"; sha256="05f1azdz202bap4pkqxiacj7wqkbmw3naw6p7xgmvx8nlh5xl40h"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp RcppArmadillo vcd VIM wrswoR]; }; simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; + simTargetCov = derive2 { name="simTargetCov"; version="1.0"; sha256="0r34jkrkq382a7afy4nqrw1ci9yh8aq3mfixw11asxjb7m16c1j2"; depends=[MASS]; }; simTool = derive2 { name="simTool"; version="1.1.4"; sha256="1jb5r32kwyfv38vij236f3mb2ijqm48iz427zya27dyhps8i305s"; depends=[dplyr plyr purrr reshape tibble tidyr]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; simboot = derive2 { name="simboot"; version="0.2-6"; sha256="0bgibrqb9j62p1chldi1lvdsgc6sgsr7afyq4lvyrc2h861f3j9d"; depends=[boot mvtnorm]; }; simcausal = derive2 { name="simcausal"; version="0.5.5"; sha256="0k1dbg10bmpxc37nq9vk849qsdi09whc8r85rj08pbcfaac8cgfv"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; simcdm = derive2 { name="simcdm"; version="0.1.1"; sha256="1qzxxpz3nvqf9801k6zgphv6vd8alf2sf6cvzggk7cz6x5jc3w1r"; depends=[Rcpp RcppArmadillo]; }; - simctest = derive2 { name="simctest"; version="2.5"; sha256="038ipxww0n09sh8al5isbm1fikr8kazwxn9cj2d0wgm6cdpy681n"; depends=[]; }; + simctest = derive2 { name="simctest"; version="2.6"; sha256="0igwn82zfx6ajv42gpyx6969aldygldkpdc9ik6601511sscvf2a"; depends=[]; }; simdistr = derive2 { name="simdistr"; version="1.0.1"; sha256="16fsj42zr627i57q1q72l1nhin7g6rxq9hfy487hf1ywd6rvns18"; depends=[]; }; simecol = derive2 { name="simecol"; version="0.8-13"; sha256="0641qh5ih1mkbdr0a5qg9i280qkzdvdjyzw56awlv66zqbjqvqq8"; depends=[deSolve minqa]; }; simest = derive2 { name="simest"; version="0.4"; sha256="1wp08dkbshn5parq69d7iizp4g16qzpdim37kcg09pgsc3aghwaj"; depends=[cobs nnls]; }; @@ -13247,7 +13505,7 @@ in with self; { simmer_plot = derive2 { name="simmer.plot"; version="0.1.15"; sha256="0g13d6qw6cl7bzmpkckiswvg9n4mrrdbs195r3pyljaw5c5bmvhp"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; simml = derive2 { name="simml"; version="0.1.0"; sha256="0j3vv3kp8rl4an6r0vzzn6syzi9h058v9040pshz0hldkhi21pby"; depends=[mgcv plyr]; }; simmr = derive2 { name="simmr"; version="0.4.1"; sha256="0903fh8vhl7r9cspanzkrn23kq68dkxhn01bjhyhf3c8wc9zfdy5"; depends=[bayesplot boot compositions ggplot2 MASS R2jags reshape2 viridis]; }; - simode = derive2 { name="simode"; version="1.1.6"; sha256="1lqndadcrqc3jix7b9kjlc8a2w712bqnw56k5h5slwrawp7krwxj"; depends=[deSolve pracma quadprog]; }; + simode = derive2 { name="simode"; version="1.1.8"; sha256="19l4xwbc7n53sgjbirpssppz5ps6alghxia4asv239fm2251r2jx"; depends=[deSolve pracma quadprog]; }; simone = derive2 { name="simone"; version="1.0-4"; sha256="09d8kdg2wxpmjgcn4dk6yqr6nmf7mzqqi6x1rz3fv7qknja6l1xi"; depends=[blockmodels]; }; simpleCache = derive2 { name="simpleCache"; version="0.4.1"; sha256="1prhahphyb4dg9qv813ahpwfngmr9blirb97pvypc5npzvahj5lv"; depends=[]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; }; @@ -13261,8 +13519,9 @@ in with self; { simrel = derive2 { name="simrel"; version="2.0"; sha256="1wshbnmq9yqh01f9mjvfhhr3d76dshkxmqchxk11v4yx4apd8b4z"; depends=[FrF2 ggplot2 gridExtra jsonlite magrittr miniUI purrr reshape2 rlang rstudioapi scales sfsmisc shiny testthat tibble tidyr]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-10"; sha256="1q7kh44xl7q48vpqbyrp85my6x97l4fqq36bry8vg3k5riihirzf"; depends=[colorspace gridBase sfsmisc]; }; simsem = derive2 { name="simsem"; version="0.5-14"; sha256="1sg1zmngpviqpbsy8kxnw4f4x93gy3gh02ykmcw8j9falfnd7g6i"; depends=[lavaan]; }; + simsl = derive2 { name="simsl"; version="0.1.0"; sha256="09d6k61c2m0n03xpqvig7310bpgddxl8vzfjgn6wbr21s73b9xis"; depends=[mgcv]; }; simstandard = derive2 { name="simstandard"; version="0.3.0"; sha256="0fg5y6n5ydn6qxbd5sdbxh3aqj4i7qk7h9c28i3s5z4s9rxgycdj"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; - simstudy = derive2 { name="simstudy"; version="0.1.14"; sha256="1a8hxfvvvyxdja9rihgrwwhsnlsn2painr06qx6lxng7wyql0z0g"; depends=[data_table mvnfast mvtnorm Rcpp]; }; + simstudy = derive2 { name="simstudy"; version="0.1.15"; sha256="14jynqvxfp8lc7vxa3lc5cfwmvxkg9ssrh78nq0x80rj7lwx8916"; depends=[data_table mvnfast mvtnorm Rcpp]; }; simsurv = derive2 { name="simsurv"; version="0.2.3"; sha256="0jlacjgrnnlmcl6k83clfkdfb1kr2xbyz2zcmq1f3xg2z0zwypjq"; depends=[]; }; simtimer = derive2 { name="simtimer"; version="4.0.0"; sha256="1c5017xmh4767d75k4rs1pssyn7p5w41bcsjjmwk4c9g6w1jgx1w"; depends=[]; }; simts = derive2 { name="simts"; version="0.1.1"; sha256="1b76grf7c14pgyhphplnil4lkzbwn3dih4pv4xdy721ih9n9llby"; depends=[broom dplyr magrittr purrr Rcpp RcppArmadillo robcor scales tidyr]; }; @@ -13276,7 +13535,7 @@ in with self; { sinx = derive2 { name="sinx"; version="0.0.12"; sha256="0hv54n6pc8qdxl1kmwbrnnmgmd8mz6fzlplz9nr7iws1y1v0ckf5"; depends=[bookdownplus clipr cowsay crayon jsonlite multicolor pagedown rmsfact rosr xaringan]; }; siplab = derive2 { name="siplab"; version="1.4"; sha256="1kayskawq9dqwwmk17akl68xw9kwllkmh4i251gdqkfcz61j3bb4"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="3.6-21"; sha256="0khjjps3q1gdanszmgzi30yrk5qcwi2fxf8jq71raj77hfvgd2s8"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; + sirt = derive2 { name="sirt"; version="3.7-40"; sha256="18adv3gnk1cg9i3jrv6mxfdn68gpdak8451jpwkagz7n9hr0x6dj"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; sirus = derive2 { name="sirus"; version="0.1.2"; sha256="1ryi9b6vadgmv3ybb2vw7sqy4nr8f8zxb3by0s6f8xqn6vfpmmbg"; depends=[ggplot2 Matrix Rcpp ROCR]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; @@ -13288,25 +13547,25 @@ in with self; { sitreeE = derive2 { name="sitreeE"; version="0.0-5"; sha256="16m8w0rxb40pimzd06znqskz74jk4rrki4gjy8nk24r1zih2cjq1"; depends=[data_table sitree]; }; sivipm = derive2 { name="sivipm"; version="1.1-4.2"; sha256="0y1wpzvndbyyzf063mzisqdk9ndj29ygiipmmz7i4xdpwidv21p6"; depends=[seqinr]; }; sizeMat = derive2 { name="sizeMat"; version="1.1.0"; sha256="1pxb99gd0zfrpbq2ndmhciv2bc8xdfgm0q1y771f6ji5665qxgfw"; depends=[MASS matrixStats MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.7.2"; sha256="1kx1qqgp4fhwwwpqn9mv8m1pnpjxfs7ww36ns7j1ja4a7ydwn2hp"; depends=[bayestestR broom dplyr forcats ggeffects ggplot2 ggrepel glmmTMB insight knitr lme4 magrittr MASS modelr nlme parameters performance psych purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; + sjPlot = derive2 { name="sjPlot"; version="2.8.0"; sha256="0ahz6v6bhvq1537inwakmrafs44hs2m9w0ra8q17fz626nn9rb9b"; depends=[bayestestR dplyr effectsize forcats ggeffects ggplot2 ggrepel glmmTMB insight knitr lme4 magrittr MASS modelr parameters performance psych purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; sjlabelled = derive2 { name="sjlabelled"; version="1.1.1"; sha256="0c9wy0gsr2sbkrv2638xbi7qm0gl6jyr6sfricavhkm7l4hljjkz"; depends=[haven insight magrittr purrr rlang tidyselect]; }; sjmisc = derive2 { name="sjmisc"; version="2.8.2"; sha256="0rl0bmk91wc4dxdgy008fl0dwkx3ffvys30vgpnr78lb4pk45nb2"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.17.6"; sha256="11z1wfi0d74d1rld0320l3vmv6rl41wa0v9bjc44rk06yc90wld2"; depends=[bayestestR broom dplyr emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; + sjstats = derive2 { name="sjstats"; version="0.17.7"; sha256="029rl05p88bp01favz300m980r1khcx2a2kn88yqbnbgkjjgqqc6"; depends=[bayestestR broom dplyr emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; - skimr = derive2 { name="skimr"; version="1.0.7"; sha256="0zbmj8vx4m7z66lf7phr3cj8dzp1ry5xc705w401154h2f5a4fk9"; depends=[cli dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; }; + skimr = derive2 { name="skimr"; version="2.0.2"; sha256="1310fgmg1mzgy1xw6rbnr0v5habzi0v18383cpwkgir38ild9llk"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect]; }; sklarsomega = derive2 { name="sklarsomega"; version="2.0"; sha256="05ar391bsaixv83dah3qzfi50avsjhn85niyq5n05sb8d5943z9h"; depends=[extraDistr hash LaplacesDemon Matrix mcmcse numDeriv spam]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.61.3"; sha256="1n3cfsvrrnf3n9yvxwxq9jczc2k208rkbsr809hi0g33lcizcm33"; depends=[car doParallel doRNG foreach future iterators kableExtra knitr lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; + skpr = derive2 { name="skpr"; version="0.62.0"; sha256="07i6k3dzhwy7yblja3dpds0mihnzy9m9hip00p9n5plw65hywi2n"; depends=[car doParallel doRNG foreach future iterators kableExtra knitr lazyeval lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; skynet = derive2 { name="skynet"; version="1.3.0"; sha256="02kkgrqcrg1x61fip47w6vzi8nya12rxg47qjhn4lw4czaympqpx"; depends=[data_table dplyr ggplot2 ggrepel httr igraph maps stringr]; }; skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; }; slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; - slam = derive2 { name="slam"; version="0.1-45"; sha256="0xvj8va6xd7zkn3l4a5ad7v62s7xmkz8frq7gpcl3b6vqwckkaw4"; depends=[]; }; + slam = derive2 { name="slam"; version="0.1-46"; sha256="1ihhbx76miwys35gsbhijriadvrw4f51lc3v45pnn6cvcfd9hr0b"; depends=[]; }; sld = derive2 { name="sld"; version="0.3.2"; sha256="0za5pw7ki419ni9pqqzddb10d16nvv5rh5jrkl4f77j0ps2ajylp"; depends=[lmom]; }; sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; }; sleepr = derive2 { name="sleepr"; version="0.3.0"; sha256="1ka4pl6a09d1qga5svcirc5ywmzz9pcml09053745lz3p1v8fnn3"; depends=[behavr data_table]; }; @@ -13318,7 +13577,7 @@ in with self; { slim = derive2 { name="slim"; version="0.1.1"; sha256="0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1"; depends=[data_table MASS]; }; slimrec = derive2 { name="slimrec"; version="0.1.0"; sha256="1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377"; depends=[assertthat bigmemory glmnet Matrix pbapply]; }; slippymath = derive2 { name="slippymath"; version="0.3.1"; sha256="0dqnv089mcfxvpsc1px7mblim6m77n59xpcysz75jrvpc5q4lsrg"; depends=[png purrr raster]; }; - slm = derive2 { name="slm"; version="1.0.0"; sha256="06r04kamg9y491q9wl4cvnvl301y7a47l70sl25vzi2q7y3bcf8y"; depends=[capushe ltsa]; }; + slm = derive2 { name="slm"; version="1.1.0"; sha256="1y9pw9lgxp2xz6smbhg0rayjszm83kxf2an9rk9pdhlmx6670bbf"; depends=[capushe expm ltsa sandwich]; }; sloop = derive2 { name="sloop"; version="1.0.1"; sha256="00fk5fr5zsk2qxc1kfhmshhjxgnamm3401089sx8m2l529zd6r8j"; depends=[codetools crayon purrr rlang tibble]; }; slouch = derive2 { name="slouch"; version="2.1.2"; sha256="0xf2saf4q0ywmng3avl6hjd2wjjzfpbwlnagggvs8ri41jyk7gma"; depends=[ape memoise]; }; slowraker = derive2 { name="slowraker"; version="0.1.1"; sha256="0glc3ldvbqkvzfvhs4s5mzx1kfz05px4k7rx5jfp9dm9d0gfpvsx"; depends=[NLP openNLP SnowballC]; }; @@ -13333,7 +13592,7 @@ in with self; { smapr = derive2 { name="smapr"; version="0.2.1"; sha256="1gcq66gs6968c5h303dqd2jyw2rcdwxv642ki1cmpdj6ix665dpr"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; smartR = derive2 { name="smartR"; version="0.62.0"; sha256="1jc2zvys05xs8y24fsrqkfvg77dpcqd2ydq1rknh0j9m4qhd9x9i"; depends=[caret chron clues cluster foreign ggplot2 ggrepel ggthemes gridExtra gstat gsubfn gWidgets2 gWidgets2RGtk2 igraph jpeg jsonlite lattice mapdata mapproj maps maptools marmap mtsdi nnls PBSmapping plyr R6 RColorBrewer reshape2 rgdal rgeos rjags ROCR rpart scales shape sp spdep sqldf vegan]; }; smartdata = derive2 { name="smartdata"; version="1.0.2"; sha256="1j1ngvlaj0kx0kp8ffvndcd5kk8zamjrgx2dn156zp4zjsd27vhv"; depends=[adaptiveGPCA Amelia Boruta checkmate class clusterSim denoiseR discretization DMwR FSelector functional imbalance infotheo lle magrittr mice missForest missMDA MVN NoiseFiltersR outliers RoughSets unbalanced VIM]; }; - smartsizer = derive2 { name="smartsizer"; version="1.0.1"; sha256="0m474f6dz0izwdh2xvgx6shsbkpr969ckcld56d7c589kjhapbrl"; depends=[MASS]; }; + smartsizer = derive2 { name="smartsizer"; version="1.0.2"; sha256="1w2vf6q3f7bywkvazgxn9gh7f2bqy4rg74mm4r6izw4gx7r81ls6"; depends=[MASS]; }; smatr = derive2 { name="smatr"; version="3.4-8"; sha256="0qqqbg65flxh48sw7x90zvgzbpcfzb1811h0pz3zlhdw9a7khs9n"; depends=[]; }; smbinning = derive2 { name="smbinning"; version="0.9"; sha256="1sr0nsqqzxdf402g9qx1ycigbh330idl9n2cyli4x4zxj1nqm3yv"; depends=[Formula gsubfn partykit sqldf]; }; smcfcs = derive2 { name="smcfcs"; version="1.4.0"; sha256="0dlk2i2g8scbqy573drpf5252g0aa2i1v63172jswjmy5hl28byf"; depends=[MASS survival VGAM]; }; @@ -13349,7 +13608,7 @@ in with self; { smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; }; smoof = derive2 { name="smoof"; version="1.5.1"; sha256="01jkldmxn86vmcmmz81mdlhpm1m3bddj4sv550a3b4wm1r3gddng"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="2.5.3"; sha256="0anmdqsx3yxpj4amjv00igsmrxbn5lx4g10x4gjbf6cns2dl4q29"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; + smooth = derive2 { name="smooth"; version="2.5.4"; sha256="0apjjqzb36z71500lyccm9jdss7h7736g8lrs3rfz5f6d2k5yqf6"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.3"; sha256="11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothROCtime = derive2 { name="smoothROCtime"; version="0.1.0"; sha256="03iihjxb5xdaf74cm9cajqqjli754mdmv5v1y4hla9vv23017ca1"; depends=[ks]; }; @@ -13359,12 +13618,13 @@ in with self; { smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; smoothr = derive2 { name="smoothr"; version="0.1.1"; sha256="03pqvblrw0qj55gncn6a3hb0y0y64k8v1a2a8g64p53jjmlrw9nv"; depends=[sf units]; }; smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; + smoots = derive2 { name="smoots"; version="1.0.1"; sha256="1kk1hvfqxslg76gy8gzaidv3d55pflyvbv3ski6rkk0l9lwbb2q1"; depends=[]; }; smotefamily = derive2 { name="smotefamily"; version="1.3.1"; sha256="062yps71bqnyff1hzqb7yvigvqg2lnc24r9gfp8m3zhvmyprk3cp"; depends=[dbscan FNN igraph]; }; - smovie = derive2 { name="smovie"; version="1.0.1"; sha256="0nh228vp06w83wm826vw62gzy0zk66ng61safwvhl8lgaxkbwqmj"; depends=[revdbayes rpanel SuppDists]; }; + smovie = derive2 { name="smovie"; version="1.1.1"; sha256="10mqzk9xrd3iicldz8n49v0nj81rjwy6fds4kxwa7vzsqapdw1g2"; depends=[revdbayes rpanel SuppDists]; }; smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; }; sms = derive2 { name="sms"; version="2.3.1"; sha256="0vr5jy8bxbczaqr9kg0fnanxhv9nj51yzgacrb63k33cs85p981m"; depends=[doParallel foreach iterators]; }; smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; - smurf = derive2 { name="smurf"; version="1.0.1"; sha256="1jp0dziqpiffj08kkm28bg4jzsijs30xlz237q8xdxdrf64igvik"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; + smurf = derive2 { name="smurf"; version="1.0.2"; sha256="08k64y0wb9da7ji94zra411zwcvssi0lb1drh98p6w9pwvn552rf"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; sn = derive2 { name="sn"; version="1.5-4"; sha256="0x46gxkplxbnhaqbpiav1r4xlv4ib7n57kxmca7scqwj22y7wrs6"; depends=[mnormt numDeriv]; }; sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; }; snahelper = derive2 { name="snahelper"; version="1.0.0"; sha256="15x7qp36lzs61ll3gqyjmxix0pqnyf2rz799mxzkzxzwqsp0srwi"; depends=[colourpicker formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; @@ -13390,12 +13650,13 @@ in with self; { snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; }; snplist = derive2 { name="snplist"; version="0.18.1"; sha256="14x31h8h3lx25rm30vhp89byrzy3qrmawi07pmzy4xpxdf0rxm4s"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; + sobir = derive2 { name="sobir"; version="0.1.1"; sha256="1v9ic35s1qm27hj2fihli68x2b5lxhddca6hgvdnpwq4hpz4vlmj"; depends=[ggplot2 raster rlang scales sp statmod tidyr]; }; sobolnp = derive2 { name="sobolnp"; version="0.1.0"; sha256="00rmigjyd3fsmhrhbvjzrfsl4ir0xpfr4xbgjws6vkx2rmcqnq1s"; depends=[minqa np pbmcapply]; }; soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; }; socceR = derive2 { name="socceR"; version="0.1.1"; sha256="1vd0r3vixavg1br2q3kfn3nvl7dw854vkcfwcvyw411k84ivb13y"; depends=[Rcpp]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; socialmixr = derive2 { name="socialmixr"; version="0.1.5"; sha256="1kkvhrw28cgijnhcyc8phbq797pcal5h40av8brpbvvcf82yx0xd"; depends=[countrycode curl data_table httr jsonlite oai stringr wpp2015 XML]; }; - sociome = derive2 { name="sociome"; version="1.2.0"; sha256="12qk3qjxp0sczcawi29fy1gzqzkprr2d1raqhs01rhk2a1hyp2p8"; depends=[dplyr magrittr mice psych purrr rlang stringr tibble tidycensus tidyr]; }; + sociome = derive2 { name="sociome"; version="1.3.0"; sha256="0anynmpb6i8hwp5b0axkmfwsdyfzwd28g26ril2i3mlcivkgjyg4"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; socviz = derive2 { name="socviz"; version="1.0.0"; sha256="14713g5saa167c5wk06i9v5708cj60znc8a7c3a2wpk0h2idfjlb"; depends=[dplyr fs magrittr rlang tibble]; }; sodavis = derive2 { name="sodavis"; version="1.2"; sha256="1jf5sml51qxlpgv5b1rvyig4dm4ijw2hpnk85zf790jp22xm64jw"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; @@ -13403,7 +13664,8 @@ in with self; { softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; softmaxreg = derive2 { name="softmaxreg"; version="1.2"; sha256="0y1r4n83sv2744lpli65aip0c0cq823asb8gw9yy9yjjc9sbyr9s"; depends=[]; }; - soilDB = derive2 { name="soilDB"; version="2.3.5"; sha256="1qljwr9b09ag51bh0ip5532fs6q6qagkm8rbjbi9xr869iw16zal"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; }; + soilDB = derive2 { name="soilDB"; version="2.4.1"; sha256="0ac4pqfnpzjv6bgsyd759zkqs427jbsj5jl7zq3sdqhsq2xawjap"; depends=[aqp curl lattice plyr raster reshape2 sp xml2]; }; + soilassessment = derive2 { name="soilassessment"; version="0.1.0"; sha256="0xap6x41my7ardjpcp6rp3wvvkbjcvf6p2wla4zg2l72zb55s710"; depends=[arm caret Cubist e1071 FuzzyAHP Hmisc kernlab maptools randomForest raster rgdal rpart soiltexture sp]; }; soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="3.1"; sha256="11c094bqbwhggh0n3hdva1321gqzz2k1b7v3767wyyk1xpgzg98r"; depends=[boot MASS rpanel tkrplot]; }; soiltexture = derive2 { name="soiltexture"; version="1.5.1"; sha256="1l9npvk910488qzd45ibc7ss557hnkb78lx1p6fs3nhl8sacgyxh"; depends=[MASS sp]; }; @@ -13415,24 +13677,25 @@ in with self; { solartime = derive2 { name="solartime"; version="0.0.1"; sha256="0q6la6d281zgf1kxhrdvi3b91na60szknq0fvldvlnszlqb5vkgs"; depends=[lubridate]; }; solitude = derive2 { name="solitude"; version="0.2.0"; sha256="1wvhvzak1jy31z3q0s2m25kbkkn725qdvawpdr4gkcswk3vvr22x"; depends=[data_table future_apply igraph R6 ranger]; }; solrad = derive2 { name="solrad"; version="1.0.0"; sha256="13ybllvmig1yqsy4md4kazs83hxb9lrlwy64yw1wwr1w6sxpbnp6"; depends=[]; }; - solrium = derive2 { name="solrium"; version="1.0.2"; sha256="011yyn2fwk222w3cn0zr7pf4d8fxwxqp2i6x6b89ns58lipcrbhd"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.6.1"; sha256="17zcnfmccfl2njv1ph40jchxb06x0qhgn82fz4yg8nqyf8b9cq5h"; depends=[dplyr httr jsonlite mime]; }; + solrium = derive2 { name="solrium"; version="1.1.4"; sha256="0x83s83r4sr4r9cgk9fgcw6xz778m4gg14fzwib3qja6ax2xpk2z"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; + solvebio = derive2 { name="solvebio"; version="2.7.0"; sha256="0xgwpng5264q47axryxr19x70fljyj9frc100ys7q30b325w963h"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="4.0.4"; sha256="0ad2ifhhphx5x4kyyjvjlibdp5g84yx41i85668vcxds8r1d1i8h"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo]; }; + sommer = derive2 { name="sommer"; version="4.0.8"; sha256="0czizds24y2dj2w3611kydcs40lcg71pa9v2v7j4z73vks2p17mc"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; somspace = derive2 { name="somspace"; version="1.0.0"; sha256="1cp7mprapidzfphis697r3jipm1ig5198580mmdygvbajxcjib75"; depends=[data_table ggplot2 kohonen maps]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.6"; sha256="0jh9zk908afqxacccsph6477cc8sbcc1vxbv7jz8ppgc20imw932"; depends=[]; }; + sonicscrewdriver = derive2 { name="sonicscrewdriver"; version="0.0.1"; sha256="03v53blb8f67ybhqys4n0zxf7pk9g024ncq0g9rnj9qpr740zclb"; depends=[ggplot2 seewave tuneR]; }; sonify = derive2 { name="sonify"; version="0.0-1"; sha256="1wkqqgf8fhhaz1dmri2zzr8cdwmx3cgrxbprrz3yily5r1m17d15"; depends=[tuneR]; }; soobench = derive2 { name="soobench"; version="1.0-73"; sha256="1y2r061pd4kr0kdgp8db3qy2aj07jdiyvy2py4fmwg6b8pcf9y0l"; depends=[]; }; - sophisthse = derive2 { name="sophisthse"; version="0.7.0"; sha256="08vr5y5cvn2q7410krg7620cqv7jmprh96bv43yhh3mk6ixd21dl"; depends=[dplyr RCurl stringr XML zoo]; }; soptdmaeA = derive2 { name="soptdmaeA"; version="1.0.0"; sha256="03n1y82myq0rz14awjnx9nx1dz3dxqq58m13cw7a7ncap7fmw9r5"; depends=[igraph MASS Matrix]; }; soql = derive2 { name="soql"; version="0.1.1"; sha256="12wvbxy9xx140b7mga4ma7hkg4q6kv549gkq15fnf4dn8q43x8nf"; depends=[]; }; + sortable = derive2 { name="sortable"; version="0.4.2"; sha256="08v78r0vibr0lk09lxm0s0vfkzpp03asqnqpl8jqa6rxcb484fri"; depends=[assertthat ellipsis htmltools htmlwidgets jsonlite learnr shiny]; }; sorvi = derive2 { name="sorvi"; version="0.7.26"; sha256="19lfrc4bdiljs437w3a2bpf7abnkv0934dh929bbj2w1w8rzghjn"; depends=[dplyr ggplot2 RColorBrewer reshape2]; }; sos = derive2 { name="sos"; version="2.0-0"; sha256="0fwv76m0iihzy60kglsdjnlp6800qsll6h0v2435a50lcr53jj8g"; depends=[brew]; }; sos4R = derive2 { name="sos4R"; version="0.3.1"; sha256="0zcrk8fgg2jsp29wvbw448yp15m4lz0sbf570nyjg3admnpf5whs"; depends=[httr sp stringr xml2]; }; @@ -13440,14 +13703,15 @@ in with self; { sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.5.0"; sha256="0qczrspc8gbhxw95gclfmfxi1c098iwfryiwsnwc43g6h6gnm7fi"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="1.5.1"; sha256="0mzxqwi0qqvlaf48m901szbfqn8riwkghxjqbcpcwrx77rph22gp"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; - sp = derive2 { name="sp"; version="1.3-1"; sha256="17xm1ig80p9wc860hm3bgishz6lj9fxgwqidj7rkbk4ap99qp62p"; depends=[lattice]; }; + sp = derive2 { name="sp"; version="1.3-2"; sha256="0kpjsqh3lzqp1m0avsvm54lazlgwfx3hyf0av3mvbyslsanj42ll"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; spANOVA = derive2 { name="spANOVA"; version="0.99.1"; sha256="0dsi1cj0i5gm3b1wlrb2r5nbw1zmnqiwvgz41s0wmm7wwjsbva3x"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; + spBFA = derive2 { name="spBFA"; version="1.0"; sha256="0w50zzizh8ki0ngwjaj92g0lcj79ssllv75a1b4i37hiy4qh4z1m"; depends=[msm mvtnorm pgdraw Rcpp RcppArmadillo]; }; spBayes = derive2 { name="spBayes"; version="0.4-2"; sha256="0qmh8sdawhssr1jmx9dc56mxxwsgya8spsss88jgg0npvmpl5khb"; depends=[abind coda Formula magic Matrix]; }; spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.3"; sha256="0syb4x05j878jhcql8prfw1aqxmpi1idxk1d4xl52j32wngkpn8b"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; spCP = derive2 { name="spCP"; version="1.2"; sha256="0y00k96p96jgp84wbdhqfwsq2fg8c68gc5310rnzpiv3clws27fb"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; @@ -13455,15 +13719,14 @@ in with self; { spFSR = derive2 { name="spFSR"; version="1.0.0"; sha256="0094plnjlyhnnjqw3i4an5q95bw6hjy1gzc7zr6wy77faivqsbms"; depends=[class ggplot2 mlbench mlr parallelMap tictoc]; }; spGARCH = derive2 { name="spGARCH"; version="0.2.0"; sha256="03jn5v5szq2nfihwvv3v966bv48wng2bahyaxlkvik2firdl8j9y"; depends=[Matrix nleqslv Rcpp RcppEigen Rsolnp spdep truncnorm]; }; spMC = derive2 { name="spMC"; version="0.3.10"; sha256="0p0s6w7sif02b91b73a0zb2i4i95a8m86dkqmgx6w1jk9h2mgqaz"; depends=[]; }; - spMaps = derive2 { name="spMaps"; version="0.3"; sha256="0w4rrzbybaf9zgb09zg0zkf2hgvfrwx57yzbxm4px1ygdfxyi4cm"; depends=[raster rgeos sp]; }; + spMaps = derive2 { name="spMaps"; version="0.4.0"; sha256="0n9693aam7gsclfhijq7cy61l0w4mm5vf3rjaz5w0jrz77lrkprh"; depends=[raster rgeos sp]; }; spNNGP = derive2 { name="spNNGP"; version="0.1.2"; sha256="0zr2lfvrjlpi6j3xswi974spvhmkbf1ddfb6d8f2zddkfhppfg00"; depends=[coda Formula RANN]; }; spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; }; - spTest = derive2 { name="spTest"; version="0.2.5"; sha256="11x2wq3031mqbj4n6hvb4l3sp4382qankdl1v1qh7ab2xa0h6xw8"; depends=[geoR sp]; }; - spThin = derive2 { name="spThin"; version="0.1.0.1"; sha256="1cj859q0i5ldqvndky2jwr5jwnpgj01mfqkw8hb8pibpwaknmy7y"; depends=[fields knitr spam]; }; + spThin = derive2 { name="spThin"; version="0.2.0"; sha256="0j10j1cbbwp3baqm3b59rxlnd643mkx1mirlxpnr1ad2g7xpm69f"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.3"; sha256="0vzqig9dq4k6p5s2gbm5arqiih28ghzjx0fs7ml70vx2f181jrxi"; depends=[coda extraDistr sp spacetime]; }; spaMM = derive2 { name="spaMM"; version="3.0.0"; sha256="1rwgwh4lvpgbplbzrxi08cdmay9q44dv0szcdfnz74wdsgmpxjjs"; depends=[MASS Matrix nlme nloptr pbapply proxy Rcpp RcppEigen]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; - space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; }; + space = derive2 { name="space"; version="0.1-1.1"; sha256="09dpksbda4lg5hax47a9h9shjmggza6583slvdj0fldblykpyxck"; depends=[]; }; spaceNet = derive2 { name="spaceNet"; version="1.2"; sha256="1s2672icxs0qvdhl52xhllgvh1i9mjfrn5j3icyw6h61ljbnhy11"; depends=[MASS mclust permute RcppTN Rfast sna vegan]; }; spacejam = derive2 { name="spacejam"; version="1.1"; sha256="1mdxmfa1aifh3h279cklm4inin0cx3h0z2lm738bai34j6hpvar7"; depends=[igraph Matrix]; }; spacesRGB = derive2 { name="spacesRGB"; version="1.2-2"; sha256="0rl5xh4pa29ab3ckqhb4pq7s8x76738na320kzhidyhj6x39a6kf"; depends=[]; }; @@ -13474,18 +13737,18 @@ in with self; { spacyr = derive2 { name="spacyr"; version="1.2"; sha256="1xsiz6zx89vs6ykrkkp011d8fz4ksdgnf5nyaq5ynjr6zv865vks"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.5.0"; sha256="1r3rgvmkcrkzm6ikbbmnm4rfdrnwgmn4wq21mxgjs2bzg2r72mw6"; depends=[]; }; spagmix = derive2 { name="spagmix"; version="0.3-1"; sha256="0xfrm4i28sy490g5324bc43dxlrgcnzxg27gsd5b81mqi03sry9j"; depends=[abind mvtnorm RandomFields sparr spatstat]; }; - spam = derive2 { name="spam"; version="2.3-0"; sha256="194n5mgvyms9ckjqixl3h33apii8h9kqspqg2si9k741k578qb3w"; depends=[dotCall64]; }; - spam64 = derive2 { name="spam64"; version="2.3-0"; sha256="1n9gf063r5mfr4aagwcvv2g6wyyp46r744lylpzr9hm4hx04sw0c"; depends=[]; }; + spam = derive2 { name="spam"; version="2.4-0"; sha256="0xb7a0x1i93kzijr518m9plzmg8s3mxh5anwfx9xrkg5ipldvz10"; depends=[dotCall64]; }; + spam64 = derive2 { name="spam64"; version="2.4-0"; sha256="1s2kjjyzrvj9yc57x5f03pkc4p2xclfnny14xch6dcv6rkkk6izq"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.4.2"; sha256="15drc11lh0qxpww50p0smi8qxfbln82bx0yd74jqf71irhk5jxyp"; depends=[magrittr xml2]; }; - spant = derive2 { name="spant"; version="0.15.0"; sha256="05pqa0zv9zqykr8xgvd3mm7m62igy1jln70q0qn9lsdbdb79yn5z"; depends=[abind complexplus foreach magrittr matrixcalc minpack_lm nnls plyr pracma readr signal smoother stringr svd tibble tkrplot]; }; + spant = derive2 { name="spant"; version="0.18.0"; sha256="047xk0a2a93pzda8ygsxbvhdd2ycs95rqrkljwgrd698l9fkqsc4"; depends=[abind complexplus fields foreach magrittr MASS matrixcalc miniUI minpack_lm mmand nnls oro_dicom plyr pracma ptw readr RNifti RNiftyReg shiny signal smoother stringr svd tibble viridisLite]; }; sparcl = derive2 { name="sparcl"; version="1.0.4"; sha256="138krflvfdlx4hlh90mswds51i8aw2vv00gm5lgkfsvxj4w324jg"; depends=[]; }; spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.2"; sha256="1kvzfjhf1q5jzlq5d04s7d96j63vnvqqrh8s03rwkl79h1dhqhhp"; depends=[sparklyr]; }; sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; sparkavro = derive2 { name="sparkavro"; version="0.2.0"; sha256="005pdfb08clq2fsabdxcbmd4n8nj5ix6yqk5pxpv3gvrzw8s7y32"; depends=[DBI dplyr sparklyr]; }; sparkbq = derive2 { name="sparkbq"; version="0.1.0"; sha256="0jcxnivi5zfbixmdywhn1v42lxi085wh7r4c26laclz9j2wvj8mk"; depends=[sparklyr]; }; sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; - sparklyr = derive2 { name="sparklyr"; version="1.0.3"; sha256="16lzr72hf2ryid6m7pf0wbw69ji9r6fv88lxgr6n5l1xbspja301"; depends=[assertthat base64enc config DBI dbplyr digest dplyr ellipsis forge generics httr jsonlite openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi tibble tidyr withr xml2]; }; + sparklyr = derive2 { name="sparklyr"; version="1.0.5"; sha256="1sh023f6djxm2bmjhrbgly8x3y87vlcjx00p7s3vkc2zl3mpydy5"; depends=[assertthat base64enc config DBI dbplyr digest dplyr ellipsis forge generics httr jsonlite openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi tibble tidyr withr xml2]; }; sparklyr_nested = derive2 { name="sparklyr.nested"; version="0.0.3"; sha256="0lva7fbjp253kxq3970h52cr8s52xycbi03d5shsyna8grhkbczj"; depends=[dplyr jsonlite listviewer purrr rlang sparklyr]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; sparktf = derive2 { name="sparktf"; version="0.1.0"; sha256="0jd018n7553q0ldv6whxbj2s38myig0m8zq4fbp8fsv34q5wnsx4"; depends=[sparklyr]; }; @@ -13503,10 +13766,10 @@ in with self; { sparseMatEst = derive2 { name="sparseMatEst"; version="1.0.0"; sha256="06y061zl6id7cfw3cqzvwykzlijmala8hj61i04mgc491ngybimv"; depends=[glasso]; }; sparseSEM = derive2 { name="sparseSEM"; version="2.5"; sha256="0ig8apsi94kvbcq3i8nzmywbdizlss7c6r9bppcyl9lxgikc3cds"; depends=[]; }; sparseSVM = derive2 { name="sparseSVM"; version="1.1-6"; sha256="0b0qiikjyyh9qfd4jl69zqnlp7adxq63mwsxvgwvyc0pv5ccg8i0"; depends=[]; }; - sparsebn = derive2 { name="sparsebn"; version="0.0.5"; sha256="19315nzj9pz98498amlhas6ii3vwvn3qxz5a6136nh2xfwfg2bhc"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; + sparsebn = derive2 { name="sparsebn"; version="0.1.0"; sha256="1f6b6wb5lg3avcgwcr2dbaikcrrvk0vb5ag5c1c30j0xckgl3n1v"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.7"; sha256="1a810wrjvgzqmlgcx1lnvxz8j1v8ycfqwk9acnm84c4lmb8rkyx0"; depends=[Matrix nnet]; }; sparseinv = derive2 { name="sparseinv"; version="0.1.3"; sha256="06inzix9m7b5g7c97lyvyl2g7fdr4iz60791hl2w9mah7nd6bfja"; depends=[Matrix Rcpp spam]; }; - sparsenet = derive2 { name="sparsenet"; version="1.3"; sha256="1n95imjvs0c0yp4bmayaib5yab0abrr0zyq1crp5gg8686dzcbjc"; depends=[glmnet Matrix shape]; }; + sparsenet = derive2 { name="sparsenet"; version="1.4"; sha256="1r7xmpn3r8dq1zm6ghygks3l014kqlrpfgsl8q23w7rly8ksw3m9"; depends=[Matrix shape]; }; sparsepca = derive2 { name="sparsepca"; version="0.1.2"; sha256="0wk2nm37p15gb8i4s45izzzdmwywr56kv4g0j3jd5s3slm224vv4"; depends=[rsvd]; }; sparsepp = derive2 { name="sparsepp"; version="1.22"; sha256="0wa1585pkbn3y11apyim4z1ixn300c1yyv9bf2qldb6cjfiv7699"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; @@ -13529,8 +13792,8 @@ in with self; { spatialkernel = derive2 { name="spatialkernel"; version="0.4-23"; sha256="0kvhirh7afk2gfy21pa6117yk6kzbaf2dxfkr1ax3b554rnrv4p0"; depends=[spatstat]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; - spatialreg = derive2 { name="spatialreg"; version="1.1-3"; sha256="1004rz4x34i0nmm46ac2vq7ddxp31cvbbdhd79jd49z4vzycs2bn"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; - spatialrisk = derive2 { name="spatialrisk"; version="0.6.2"; sha256="1n7akj7jhl6m3gqa51wi4cmbi3bblzrja3ss6ni664pargnkvd0q"; depends=[classInt dplyr ggplot2 Rcpp RcppProgress sf shiny tmap viridis]; }; + spatialreg = derive2 { name="spatialreg"; version="1.1-5"; sha256="0zdj67rvfvssjch5hwyi4gvyr7pjgfjrkbhnc4q9psfjp9rhggyx"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; + spatialrisk = derive2 { name="spatialrisk"; version="0.6.5"; sha256="0qgy4imk1p35vglj8ahfaf8gy7ixqzdwp75nf1q2y22gjq45d1xa"; depends=[automap classInt dplyr fs ggplot2 gstat lubridate mgcv Rcpp RcppProgress sf sp tmap viridis vroom]; }; spatialsegregation = derive2 { name="spatialsegregation"; version="2.45"; sha256="04ibvk6shs15b8piln2lcnlj8s5gy6r7wraz6591dbc31grzaa36"; depends=[spatstat]; }; spatialwarnings = derive2 { name="spatialwarnings"; version="1.3.1"; sha256="139m6jaw6f5gglwqrd4f5mzr4vkqk2r1a069971y7ap2klzzbhns"; depends=[ggplot2 plyr Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; spatialwidget = derive2 { name="spatialwidget"; version="0.2"; sha256="105pgsv4dq3pmk9bylb3fxzvp44frfp6xcvq5d01ja4gnwmb35p2"; depends=[BH colourvalues geojsonsf jsonify rapidjsonr Rcpp]; }; @@ -13539,10 +13802,10 @@ in with self; { spatstat_Knet = derive2 { name="spatstat.Knet"; version="1.11-2"; sha256="0jkpj4m44cqid5jdn7fwg3cl15lsmc0dp3bzp6759spivsx1yzq1"; depends=[Matrix spatstat spatstat_utils]; }; spatstat_data = derive2 { name="spatstat.data"; version="1.4-0"; sha256="137cf9x6qcp7lw3rpjqizsy73z99yihff8gr434wlz7b5fwmn7hj"; depends=[spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="3.6-0"; sha256="19kv85smy8jp2bx1mgppav50k07xm8zvmf7snzj29rrspiws7sig"; depends=[spatstat spatstat_utils tensor]; }; - spatstat_utils = derive2 { name="spatstat.utils"; version="1.13-0"; sha256="0wijib2fmmvz5sf2sp212ms88ffhcz9c1d0j2ljdxf222lp6v8l1"; depends=[]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="1.15-0"; sha256="031ar9yycg8kwknn0aa0pn12qjw722payff9jdzz8fb91drpvq4h"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.2"; sha256="0acg6n5qs3z9c7y2n3amla61dm3z1p16njkx0h52dlgdbj5v1nhn"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.5.0"; sha256="0jwv3mirm5wkfqja0nwy25nfndis8px4awpjh4hk9bi77dfy14bf"; depends=[dplyr sp tibble]; }; - spc = derive2 { name="spc"; version="0.6.1"; sha256="0pwmwyizpxky50nlm0k7i3rn0985wg0vg7d58a1jphzf2r8pdcp2"; depends=[]; }; + spc = derive2 { name="spc"; version="0.6.3"; sha256="0ik5qmf0f0l77rbg78rp8v606h0d1qp4kccl6j3vqfb2hjsqb7r0"; depends=[]; }; spc4sts = derive2 { name="spc4sts"; version="0.5.1"; sha256="0fvmzp222qsprl7jhmj9yz23kf1n7xl4i05infms3nasgac20hcb"; depends=[gridExtra LS2Wstat rpart]; }; spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; spcosa = derive2 { name="spcosa"; version="0.3-8"; sha256="1hw3njn2c8wj8bk2qpnbi2mbhj485q3gpbjf1gq9k6my4brdp86b"; depends=[ggplot2 rJava sp]; }; @@ -13565,6 +13828,7 @@ in with self; { spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; }; spectralAnalysis = derive2 { name="spectralAnalysis"; version="3.12.0"; sha256="0mz01hx86qi65k6vzz9k1j9q7gi10dh14cqvrlfy93f3kmi52q0x"; depends=[baseline BiocGenerics data_table ggplot2 hNMF jsonlite magrittr NMF nnls plotly plyr RColorBrewer signal viridis]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; + spectralGraphTopology = derive2 { name="spectralGraphTopology"; version="0.2.0"; sha256="02j374zsz4ba8ldy52x43rih1p77b56cv5xlbycj5wmkzny2gzx1"; depends=[MASS Matrix progress Rcpp RcppArmadillo RcppEigen rlist]; }; spectrolab = derive2 { name="spectrolab"; version="0.0.8"; sha256="1hjvi9na94f7n7yr64p0bvh0mzckwmfh36d6zxisrxr08zxwyxzz"; depends=[devtools prospectr RColorBrewer shiny shinyjs usethis]; }; speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; spef = derive2 { name="spef"; version="1.0.8"; sha256="1c4hpm19zqh869z8qbixkfbidnygc3fy91d0m2l4bp2s6bq1wdnz"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; @@ -13615,7 +13879,7 @@ in with self; { spmoran = derive2 { name="spmoran"; version="0.1.7.1"; sha256="0nxg1xl3m4lkpxrkfcbnmf1x0gf43llz7095rj6i3flgmymirnxh"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK spdep vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spnn = derive2 { name="spnn"; version="1.2"; sha256="1pfgffcaycv8ym9sal24s7h3zycjnnkkwhp4c2drigh6qvq8bly6"; depends=[MASS Rcpp RcppArmadillo]; }; - spocc = derive2 { name="spocc"; version="0.9.0"; sha256="1azid8girmj4f0j4x9irljpxbsdpsxz572grb4fdjdxmlzpls7sy"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; + spocc = derive2 { name="spocc"; version="1.0.2"; sha256="1mglkbbr2zhy884ilhxy2dkcjlr4aq16z08vs9gc44258i59kzy0"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; spongebob = derive2 { name="spongebob"; version="0.4.0"; sha256="1ar5173fwx1am5rgjlnczfla6b49g0azl0h9vn89ipw7f71rr5j7"; depends=[]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; @@ -13624,11 +13888,10 @@ in with self; { spotifyr = derive2 { name="spotifyr"; version="2.1.1"; sha256="0d3n75gyyqi5vgp3z4v3g9l7963xgadi98p1b5iag78zzz1zkcz8"; depends=[dplyr genius httr jsonlite lubridate purrr readr rvest stringr tibble tidyr]; }; spp = derive2 { name="spp"; version="1.16.0"; sha256="08zxxgyp0h6733b08jmml7k4rhfd3mi5dda3jrzid0s184y0z29w"; depends=[BH caTools Rcpp Rsamtools]; }; sppmix = derive2 { name="sppmix"; version="1.0.2"; sha256="1924lrxjlijlbvjbkkwb3pfa4klg49ph6hz66b7kyy1371wa2b9y"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; }; - spray = derive2 { name="spray"; version="1.0-7"; sha256="0lx837swixh02ivpg8b39c895g5xlxwrv95nppkpbqivxkn0zyjp"; depends=[magic partitions Rcpp]; }; + spray = derive2 { name="spray"; version="1.0-8"; sha256="0gkzfzidwccznbf17qkmyppr7qsl8w7jn5ghqxgaqwkz6k8ad93f"; depends=[magic partitions Rcpp]; }; spread = derive2 { name="spread"; version="2019.8.5"; sha256="1mc25abh1jxgis9p78pdy91a45kanr7y32xbqypyd514jjylnc52"; depends=[data_table fhidata Rcpp RcppProgress readxl stringr zoo]; }; spreadr = derive2 { name="spreadr"; version="0.1.0"; sha256="1azf1543ijlgmry0f2sxivpy4hk9mcwnn5kqggzwwzwla2ql3lhj"; depends=[extrafont ggplot2 igraph Rcpp]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; - sprinter = derive2 { name="sprinter"; version="1.1.0"; sha256="12v4l4fxijh2d46yzs0w4235a8raip5rfbxskl0dw7701ryh7n8g"; depends=[CoxBoost GAMBoost LogicReg randomForestSRC survival]; }; sprintr = derive2 { name="sprintr"; version="0.9.0"; sha256="0nnzjn7zrcgcmk3rs0hn56jcjrzrn5z0kc77bv4zzvbz5vr8gbwj"; depends=[glmnet Rcpp RcppArmadillo]; }; sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; }; sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; }; @@ -13640,7 +13903,7 @@ in with self; { spsurvey = derive2 { name="spsurvey"; version="4.1.0"; sha256="1f48jddws3whaakvkcps7kvg179q74mjprh0rs3y6wfhfn0w67hm"; depends=[crossdes deldir foreign Hmisc MASS rgeos sf sp]; }; spt = derive2 { name="spt"; version="2.5.1"; sha256="04j38d2b35p4798znnc49vqrg8r8bygwi07vybfj3nzimlp2mkrn"; depends=[]; }; sptemExp = derive2 { name="sptemExp"; version="0.1.4"; sha256="16rp20l65id6jiqify7hii0xpgkiyhgp9xg89b002n0jsy10pgph"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; - sptm = derive2 { name="sptm"; version="17.12-7"; sha256="1l5in0jkqg44rr2id3h25jrfbn7x855p31z338hnmdpfwkpm2b1a"; depends=[kyotil survey survival]; }; + sptm = derive2 { name="sptm"; version="2019.11-25"; sha256="1hdymzngdppmh56dqh0k88n9hg68pbx9rgmimbz4ihnfx2plvadh"; depends=[kyotil survey survival]; }; spuRs = derive2 { name="spuRs"; version="2.0.2"; sha256="00c0hnyrcbkbj269czxbfgmgi88y0vxzm79sxclllkzr9rdd1p53"; depends=[lattice MASS]; }; spup = derive2 { name="spup"; version="1.3-1"; sha256="0xq9z9iy3bwqhzq783qydgmczxvh7knkk9vdvwnbpbk0rbjgq3kn"; depends=[gstat magrittr mvtnorm purrr raster whisker]; }; sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; }; @@ -13653,8 +13916,8 @@ in with self; { sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; }; srm = derive2 { name="srm"; version="0.2-10"; sha256="1vcggiifp3h12pb4dcdyz4345n2sr5yjszdjgn6s4jsc99lzmj0a"; depends=[Rcpp RcppArmadillo]; }; srp = derive2 { name="srp"; version="1.2.0"; sha256="0xdzfvi7z78xmyxwd8fha3lr86jwmgjba1w8hhn4sv3v5gc9vlkh"; depends=[fda mgcv]; }; - srvyr = derive2 { name="srvyr"; version="0.3.5"; sha256="0yy18jaja7w7q6lbc2ky2lranjr6j23s88nplrvvn5a28n72mkdp"; depends=[dplyr magrittr rlang survey tibble tidyselect]; }; - ss3sim = derive2 { name="ss3sim"; version="0.9.5"; sha256="0rdb49bfxvyh0jrqycrv1hxvh7y4kvw81jccjg5ma734x44q0vm5"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; + srvyr = derive2 { name="srvyr"; version="0.3.6"; sha256="0d8mqi0cf8kxkw802vhrvnazg3kdnqzg8x5myfmz3a3m8cbk8w8q"; depends=[dplyr magrittr rlang survey tibble tidyselect]; }; + ss3sim = derive2 { name="ss3sim"; version="1.0.3"; sha256="0s2yajlhi07fvqc0rr4msd9g2jrswb83dx55wsxnw925vikqa5kz"; depends=[bbmle foreach ggplot2 gtools r4ss]; }; ssMousetrack = derive2 { name="ssMousetrack"; version="1.1.5"; sha256="069jsp2l63jp4fv2hwadqxpkp89aqmbh439zy66rx55kws75b556"; depends=[BH CircStats cowplot dtw ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; ssa = derive2 { name="ssa"; version="1.3.0"; sha256="0lbwvw8f88wvlhzd469fww0av0nbi6l76vmmxbps0ifw2q87l00d"; depends=[iterators]; }; ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; }; @@ -13686,7 +13949,7 @@ in with self; { st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.4"; sha256="120k8k1l8cfy8x746808jym7lnaplgh4s3lycgyq2wia2c35r0rc"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; stUPscales = derive2 { name="stUPscales"; version="1.0.3.4"; sha256="0a6b38lhi1p0n2hjq2j8aw2vkasdv50cpgllxfxla7ddwbhbk3nk"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; - staRdom = derive2 { name="staRdom"; version="1.0.18"; sha256="15jgp1i3fs73g2gw3blx85rgww6w94a93632f9292x342bpsy7c4"; depends=[cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; + staRdom = derive2 { name="staRdom"; version="1.1.1"; sha256="089fks6qik8wplsfibdvj7r6m89329n3grlm7sdhg4m0m7x2z8yc"; depends=[cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; stability = derive2 { name="stability"; version="0.5.0"; sha256="0mz7ikfhpfbdcp72klq7fi4zfmx2w18gz46yhwywcc4dyi277m11"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.4"; sha256="01azqg4yi5wl6wfdpjq57w41x5z2b4dsp5n3vpkz24b9avk6rm8s"; depends=[rmutil stabledist]; }; @@ -13709,26 +13972,27 @@ in with self; { stargazer = derive2 { name="stargazer"; version="5.2.2"; sha256="1pij76r60hkjlvxw6zw1v7gkib81smiqmjq7mwszn6xclq9lmsvh"; depends=[]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; }; - stars = derive2 { name="stars"; version="0.3-1"; sha256="1bcvv4y4fcnvw5lgxwab89wz27ajqqwhn4q8rqsk6lsa8259qz4v"; depends=[abind classInt rlang sf units]; }; + stars = derive2 { name="stars"; version="0.4-0"; sha256="1wby9mkqybq17aakplhz22xp3xkpih9y5b2kc5mhgsl7s07glh42"; depends=[abind classInt lwgeom rlang sf units]; }; startR = derive2 { name="startR"; version="0.0.1"; sha256="12y57n3yip5rz4rln41896a15zv5b4c67k164282fh1p6ww9gr3r"; depends=[abind bigmemory future]; }; - startup = derive2 { name="startup"; version="0.12.0"; sha256="1lan8rzl8b4zh4msh9w97kcj5d93wvwga81g9jh39gyl7xjbyqyl"; depends=[]; }; + startup = derive2 { name="startup"; version="0.13.0"; sha256="0xwilml9yv26l5bygnn9158nc0z0b8aydf09klxzsyycmsp0r2y8"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.6"; sha256="0vkqxir4ady4dn9s70dfg1fxck2xg8vnmrmxjzvk01i6pc9zyq0x"; depends=[]; }; - statGraph = derive2 { name="statGraph"; version="0.2.0"; sha256="03cxm3kvs88q7p8v859xzma97vlklx50yh3kgmmfzf4axdm6dcgm"; depends=[igraph MASS]; }; + statGraph = derive2 { name="statGraph"; version="0.3.0"; sha256="1xc10pkv3dq7x98xjqkg7ily89qj2r637y5qlnfvk08n6mzhn8w0"; depends=[igraph MASS]; }; statVisual = derive2 { name="statVisual"; version="1.1.8"; sha256="06l6f9zbycwrm47hi564v1lnxx8xjmrn79kva84n0gliblci8nx8"; depends=[Biobase dplyr factoextra forestplot gbm GGally ggdendro ggfortify ggplot2 ggrepel glmnet gplots gridExtra knitr limma magrittr multigroup pheatmap pROC pvca randomForest RColorBrewer reshape2 rmarkdown rpart_plot tibble tidyverse]; }; statar = derive2 { name="statar"; version="0.7.1"; sha256="0gxchf3mnjvxcp7dg8f1dxbm16hx4ks92z0h0ig7m9l6k6f8adkv"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr tidyselect]; }; statcheck = derive2 { name="statcheck"; version="1.3.0"; sha256="0ivybdcrymlsfv6pg6p5bv70qdvgxf2vgp0kf4r0pf2fcvav1mcp"; depends=[ggplot2 plyr rmarkdown]; }; + statcomp = derive2 { name="statcomp"; version="0.1.0"; sha256="0793k14rxiwq98zlrbsmbbkjn5z2ny5c90pia7cx3s77a3wdc96l"; depends=[Matrix zoo]; }; statebins = derive2 { name="statebins"; version="1.2.2"; sha256="0qfs796dk5x983qah32w3npv9mxzljp3g7kffdd0ansn3z7i1zbb"; depends=[ggplot2 gridExtra RColorBrewer scales]; }; states = derive2 { name="states"; version="0.2.2"; sha256="1lw1gljmkn8i8fd4ng5c3jpqrwr0gkiyazppy19dp8xl94m1xa4b"; depends=[dplyr]; }; stationaRy = derive2 { name="stationaRy"; version="0.5.0"; sha256="1h6c7iivjqir45rk6qdfr8driqjliqn09sjdm521kkb3c5qv334r"; depends=[downloader dplyr lubridate lutz magrittr progress readr stringr tidyr]; }; - stationery = derive2 { name="stationery"; version="0.98.6"; sha256="0qvvalck0j2bgzvmnl4dl54wx3b2v9mr88ii26zb5hvm7i2i4x9f"; depends=[knitr kutils rmarkdown]; }; - statip = derive2 { name="statip"; version="0.2.0"; sha256="012caxqa04qv3z49cz09qzh9crfbdc4il2d2b96l5d3qnqv9xbh9"; depends=[bazar clue rpart]; }; + stationery = derive2 { name="stationery"; version="0.98.24"; sha256="06qn3ck2cgcyrx8l27ka1y5dq8hyf01wq3hky6876a5g65b1wax2"; depends=[knitr kutils rmarkdown]; }; + statip = derive2 { name="statip"; version="0.2.3"; sha256="0kymc3ds1nx0h11ffmm3vmqr1w34gd0k788vf72x2v45h8c1ma2n"; depends=[clue rpart]; }; statmod = derive2 { name="statmod"; version="1.4.32"; sha256="083yyp84xj85zg4bhz7i90bqzl3p6155ch4abwsfc9k1lv7s2rrg"; depends=[]; }; statnet = derive2 { name="statnet"; version="2019.6"; sha256="17dj6vjnjyqrfhzjq1lys5b29j942kd15zffb69jidni3slf20q9"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm tsna]; }; statnet_common = derive2 { name="statnet.common"; version="4.3.0"; sha256="0ng90i0wm9wlyhjbnmnylc1bbqw396p1dr7f402dyry9x9ck6jl3"; depends=[coda]; }; statnetWeb = derive2 { name="statnetWeb"; version="0.5.5"; sha256="1v2zgbfl975gqhkhxvgdfhgbw7yf9y3p6kqqxldr9zskhmrn7p1x"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; - stats19 = derive2 { name="stats19"; version="1.0.0"; sha256="1lm2qif0g710n5i7gzqhbwhxm76cabs5zm6504wja343fk3vzb54"; depends=[readr sf]; }; + stats19 = derive2 { name="stats19"; version="1.1.0"; sha256="163v39dvy0gahw2ra0pvri21k02iv9waqb8pv6j55nicvpvha7jm"; depends=[readr sf]; }; statsExpressions = derive2 { name="statsExpressions"; version="0.1.1"; sha256="11f3ikrznp21sxk7r8m417f1sad0a7y63g623crvpyjr0cg0zq53"; depends=[BayesFactor boot broomExtra crayon dplyr ellipsis ez groupedstats magrittr MCMCpack psych rcompanion rlang tibble tidyr WRS2]; }; statsguRu = derive2 { name="statsguRu"; version="0.1.0"; sha256="0pqz0la86mk6zp65zzbfwhxyrqqx040p8mrm2j9wqb53r8fbnmqc"; depends=[devtools htmltab plotrix]; }; statsr = derive2 { name="statsr"; version="0.1-0"; sha256="1z0wfj1jxz02x7vl6sr651v85k88wg8rx0k2kkrwzc4ynim8shms"; depends=[BayesFactor broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tidyr]; }; @@ -13744,7 +14008,7 @@ in with self; { stemmatology = derive2 { name="stemmatology"; version="0.3.2"; sha256="1l2y4jlszz1dnafdl2wqqfgdjis07i3gzfnp1v1af32pvjy4zqhw"; depends=[cluster igraph xml2]; }; stepPenal = derive2 { name="stepPenal"; version="0.2"; sha256="08gizl6c606ibbv7x2rdvfw37rghkrprwszha79yngkzpajw8gql"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; }; - stepR = derive2 { name="stepR"; version="2.0-3"; sha256="1vz7mr2zycn4w0zv4rg2dn4v4dbbpxv8vy20sl9nphya0w0w4mrg"; depends=[digest R_cache Rcpp]; }; + stepR = derive2 { name="stepR"; version="2.0-4"; sha256="1jv2mv1glzap7nsyxwzil9wif3q3p4y9q0c3kphz49hwwrg20k79"; depends=[digest R_cache Rcpp]; }; stepp = derive2 { name="stepp"; version="3.2.0.0"; sha256="0fnjqbncadscv6ryvqyqf8qqgpfzh2hka5ld2zvw39mjqzy5gadi"; depends=[car survival]; }; steps = derive2 { name="steps"; version="0.2.1"; sha256="1ccghvhrbk0d2m1896wbnzf55i1rlvwmdnr5dikr9h9sc79dahla"; depends=[future future_apply memuse raster rasterVis Rcpp viridisLite]; }; stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; @@ -13756,7 +14020,7 @@ in with self; { stinepack = derive2 { name="stinepack"; version="1.4"; sha256="0crl77gr4x2bz2zp0a0lqiw5iqlrcx7vj67igkbzg64d1fxai85d"; depends=[]; }; stlcsb = derive2 { name="stlcsb"; version="0.1.2"; sha256="08pnj1yb4xcbhnrp2wny8lq9rvcvmsgaza07k4358csfksvmcira"; depends=[dplyr lubridate purrr readr readxl rlang rvest sf stringr tibble xml2]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; - stm = derive2 { name="stm"; version="1.3.3"; sha256="1b1i4r161i92f5q63zjfghzg39bw9d2rqdxx0y6zjd8n2p0ni3wv"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; + stm = derive2 { name="stm"; version="1.3.4"; sha256="0w8adswwrdkgv5pc5g2v60r63qhqlg7f4zkcg1x09bi9hc1i6qgv"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; stmgp = derive2 { name="stmgp"; version="1.0.2"; sha256="14d7aivnm2y5cb6wm3cj1fgaqhv0i59jb4khvrjwqihzcnii90x5"; depends=[MASS]; }; stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; @@ -13764,7 +14028,7 @@ in with self; { stoRy = derive2 { name="stoRy"; version="0.1.3"; sha256="146xs8as5f8ig2xpj9k2san4bllqxddsnlflnhl0sy6132vshyr1"; depends=[data_tree R6]; }; stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochQN = derive2 { name="stochQN"; version="0.1.2"; sha256="1zwxw95jrpkqgbgwhwdy907v9gqmvn5as4v35a75wvy3nhawka9a"; depends=[]; }; - stochprofML = derive2 { name="stochprofML"; version="1.2"; sha256="0gqfm2l2hq1dy3cvg9v2ksphydqdmaj8lppl5s5as2khnh6bd1l1"; depends=[MASS numDeriv]; }; + stochprofML = derive2 { name="stochprofML"; version="2.0.0"; sha256="1101jshd1k3b1gy6fqdirnc17qa2fgjg48rlf8kc3jklmx4n1hfs"; depends=[MASS numDeriv]; }; stochvol = derive2 { name="stochvol"; version="2.0.4"; sha256="1hb2fgnyn8zxq1j74x00msq3j807y70yxx2s3fq4csrb1935vr85"; depends=[coda Rcpp RcppArmadillo]; }; stockR = derive2 { name="stockR"; version="1.0.68"; sha256="0pgyxh19csv21vgji1sjpqaaqb1wwz62mnsf85a97ba9aph9lxwb"; depends=[gtools]; }; stocks = derive2 { name="stocks"; version="1.1.4"; sha256="0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp TTR zoo]; }; @@ -13773,7 +14037,7 @@ in with self; { stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.1"; sha256="16w6si2icpsyhkn0d3l6sh64nj6ynyymp7jxfwa792ds2wrz2mkm"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; }; storr = derive2 { name="storr"; version="1.2.1"; sha256="0409gb6wji3cjxkdcd0wc3jvsx61h3rxd8a3nr018y8rh1rpsaj6"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.3.1"; sha256="11r7ijma1v47kjd8ai06r1z4h207823cfrh0iajzjlrnx91qi4qg"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate lwgeom magrittr maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgeos rlang sf sp stringi stringr]; }; + stplanr = derive2 { name="stplanr"; version="0.4.1"; sha256="0kgs3ccyhm2hi8aia7misxwj45c5fy686sqliz7vdk8jayzdsqv1"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate lwgeom magrittr maptools nabor openxlsx raster Rcpp RcppArmadillo readr rgeos rlang sf sp stringr]; }; stpm = derive2 { name="stpm"; version="1.7.7"; sha256="1l40zb9qwshg7saqmgi7c49a3jd93ycrbvmysgzs0q8pl94vgcfs"; depends=[knitcitations MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; @@ -13782,11 +14046,13 @@ in with self; { strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; stratEst = derive2 { name="stratEst"; version="0.1.2"; sha256="045wmvkv9jxmazvy0p2dkf3200vy5gf124cv78132ysrnh2vcd4v"; depends=[Rcpp RcppArmadillo]; }; strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; }; + stratamatch = derive2 { name="stratamatch"; version="0.1.2"; sha256="0lpvz5ma7afyb08d1fn0nsdakpxd4i61vjdr774kx8f2akjrhqf2"; depends=[dplyr Hmisc magrittr rlang survival]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-6"; sha256="1jlks3g8wpqlpci6v0ryyv93agiabdiklmk6ij0pc5icrfiynbhw"; depends=[]; }; stratifyR = derive2 { name="stratifyR"; version="1.0-2"; sha256="10qlxkdbym206bvl2wc8ig00fvj1n7553vmjk6rs2n4p945qd47g"; depends=[actuar fitdistrplus mc2d triangle zipfR]; }; stratvns = derive2 { name="stratvns"; version="1.0"; sha256="1bw9l389lxiji4h7hrsshf24v135h6la9dg3xxjly53d4fi56ifh"; depends=[MultAlloc Rglpk sampling snowfall stratification]; }; + straweib = derive2 { name="straweib"; version="1.1"; sha256="0hi59p580yg6rj72grq4jx6grv7lmpi2cimp0rbxhkjpj6i1hav9"; depends=[]; }; stream = derive2 { name="stream"; version="1.3-1"; sha256="09f26m0fajaw77mb6pk9qkinzkhxpghagd1qhc3nkvcki3vwlcxa"; depends=[BH clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; streamDepletr = derive2 { name="streamDepletr"; version="0.1.0"; sha256="0a8cihwjr5bzw5dw07x2kisi4qycwmxpj5hhv9b4pjvfghdwq4b8"; depends=[dplyr magrittr Rmpfr]; }; streamMOA = derive2 { name="streamMOA"; version="1.2-2"; sha256="1zm7bcdsyazqksizir5rqibgw6w1bz85gdga0ncirh2s1z0dhi79"; depends=[rJava stream]; }; @@ -13796,14 +14062,14 @@ in with self; { strex = derive2 { name="strex"; version="1.2.0"; sha256="1vshbq83szgig93ljhnwqwdsdskayszdzwk85n1n650clriv0b85"; depends=[checkmate glue magrittr matrixStats ore processx Rcpp rlang stringi stringr tibble]; }; strider = derive2 { name="strider"; version="1.2"; sha256="0kfwanz80ki41yr5m0xw4nbbqgzl6zfvwqx906bxywlqiqi47cb6"; depends=[BH Rcpp]; }; stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; - stringdist = derive2 { name="stringdist"; version="0.9.5.2"; sha256="0nw8c317qkfq63pr0prl0hx522ddfq4cbgixb5r4pq3fxk9z303l"; depends=[]; }; + stringdist = derive2 { name="stringdist"; version="0.9.5.5"; sha256="1dqfakclzaf878x7mhwmqrcpcql2h9cv19fz5f3ygpajf3si5kqi"; depends=[]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; stringi = derive2 { name="stringi"; version="1.4.3"; sha256="1vbr6g9p1iyzdj7wfw6afyizvnd1a2srfvkl72pq23vhdcwwpkhk"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.4.0"; sha256="1p9ip7p87gbbg4s6d3d392svvzz2b5dqdq2c8ilgvn4s78nlsq47"; depends=[glue magrittr stringi]; }; strip = derive2 { name="strip"; version="1.0.0"; sha256="1j3kq6w8k66z45rpd1cgxplpnldzbyqklgs4bnbv906pyd8wk9ak"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; striprtf = derive2 { name="striprtf"; version="0.5.2"; sha256="1ra6aalalig6drsj26z9s24lmb10zssagqrvgqqi4358zbm8gwcd"; depends=[magrittr Rcpp stringr]; }; - strucchange = derive2 { name="strucchange"; version="1.5-1"; sha256="0cdgvl6kphm2i59bmnppn1y3kv65ml111bk7yzpcx7vv8wh2w3kl"; depends=[sandwich zoo]; }; + strucchange = derive2 { name="strucchange"; version="1.5-2"; sha256="1y022363a4pp0mnji91sjh1qiyspkh09sybqwj03r9pmwrd7q93x"; depends=[sandwich zoo]; }; structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; }; structree = derive2 { name="structree"; version="1.1.6"; sha256="0d3ww07grprp908i3h1xaz3jw92g0g0s3gjdnb63wl10yqqsq2vj"; depends=[lme4 mgcv penalized]; }; strum = derive2 { name="strum"; version="0.6.2"; sha256="0f5cb7cfvqhmnv4sjfr58lns4fclmr8iyka595zddy9f6dv5rqp1"; depends=[graph MASS Matrix pedigree Rcpp RcppArmadillo Rgraphviz]; }; @@ -13813,12 +14079,13 @@ in with self; { stuart = derive2 { name="stuart"; version="0.8.0"; sha256="1hcb1jybra0cpibxc1k31nr6xciwd2chxjfdnir4kfzxn2bd2cxd"; depends=[]; }; stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; studentlife = derive2 { name="studentlife"; version="1.0.0"; sha256="1snrsaapjwvcifa91hg5xcbg7n70aqcdyyq69gg20168qg8abkws"; depends=[crayon dplyr ggplot2 jsonlite purrr R_utils readr skimr tibble tidyr visdat]; }; - styler = derive2 { name="styler"; version="1.1.1"; sha256="1k660lpjvd64gnf6bndcb1cq3qxsvik928kcn6271zmkhja5rgyb"; depends=[backports cli magrittr purrr rematch2 rlang rprojroot tibble withr xfun]; }; + styler = derive2 { name="styler"; version="1.2.0"; sha256="0rdbz60x8bymis6r6188ia1y0ip3nhf5y363i4cmakr618irjab9"; depends=[backports cli magrittr purrr rematch2 rlang rprojroot tibble withr xfun]; }; stylest = derive2 { name="stylest"; version="0.1.0"; sha256="0dr7j9fh8kp6wsqql38s3rk596xl6m9nx0w1l5v25hv2bphidxzr"; depends=[corpus Matrix]; }; - stylo = derive2 { name="stylo"; version="0.6.9"; sha256="14kr12gjbk7l6f4lz5m4j51vsjkyhnpgbiflsl327az5l0nrr5vw"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; + stylo = derive2 { name="stylo"; version="0.7.1"; sha256="0l7z4d8q4kp9m0di0hch2zpbxmf7im4h0n95mrylqw93w768z76s"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; subcopem2D = derive2 { name="subcopem2D"; version="1.3"; sha256="06wwd847g9pxd0z2a8494h3nc9s280a3s1510bir24m3z7w1pqf3"; depends=[]; }; subdetect = derive2 { name="subdetect"; version="1.1"; sha256="1bcc13avs5w9vmwyf71cnjd2kwmcavmzpwyv8gvsn61n7b4j8wlk"; depends=[]; }; + subformula = derive2 { name="subformula"; version="0.1.0"; sha256="0nsl0nzj79z6aib12b5qijyab0yxlljfssiq9p8xgcgbxy4a7syy"; depends=[]; }; subgroup = derive2 { name="subgroup"; version="1.1"; sha256="1n3qw7vih1rngmp4fwjbs050ngby840frj28i8x7d7aa52ha2syf"; depends=[]; }; subgroup_discovery = derive2 { name="subgroup.discovery"; version="0.2.1"; sha256="15yvkymcig19y9h8362izap0qbv1igmd0s0yxdgv0n0l1xgfsywj"; depends=[]; }; subgxe = derive2 { name="subgxe"; version="0.9.0"; sha256="0faww87ncylqixb640hc2axvn4i50d2r2ggngmd7s9wazbb6sd55"; depends=[]; }; @@ -13835,7 +14102,7 @@ in with self; { subspace = derive2 { name="subspace"; version="1.0.4"; sha256="0p2j0lnwj3ym1v4xla6r97zjikb8alnibdc690xn9c0z21hmv43v"; depends=[colorspace ggvis rJava stringr]; }; subtee = derive2 { name="subtee"; version="0.3-5"; sha256="14pvfghsd17n9qkznik4vdalqfv5ykgqrhk2g33idl8chi9q7jjn"; depends=[ggplot2 MASS matrixStats survival]; }; subtype = derive2 { name="subtype"; version="1.0"; sha256="1094q46j0njkkqv09slliclp3jf8hkg4147hmisggy433xwd19xh"; depends=[penalized ROCR]; }; - suddengains = derive2 { name="suddengains"; version="0.3.1"; sha256="0l9dfgf07myi7sgz8xrgh93kzl2am0v3h6fbm3r9wmn63q2kqiml"; depends=[dplyr ggplot2 ggrepel magrittr psych readr rlang stringr tibble tidyr]; }; + suddengains = derive2 { name="suddengains"; version="0.4.0"; sha256="1606lj9x4qlkg5sm7i7xgp8bd2ivzngz0phc7bs06akwd7xbbnra"; depends=[dplyr ggplot2 ggrepel magrittr psych readr rlang stringr tibble tidyr]; }; sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; }; sudokuAlt = derive2 { name="sudokuAlt"; version="0.2-0"; sha256="0d530hb4d8i0qziw5iaf5r5c46c9d9ns7n5c1kcb3ffw2c1xi1pl"; depends=[magrittr]; }; sugarbag = derive2 { name="sugarbag"; version="0.1.1"; sha256="1wldsqfgw8mqhwikgaasrz7qrnpj51f0kwi9i7v6hil756y5bhjv"; depends=[dplyr geosphere purrr rlang rmapshaper sf tibble tidyr]; }; @@ -13843,27 +14110,28 @@ in with self; { sumFREGAT = derive2 { name="sumFREGAT"; version="1.1.0"; sha256="1ycdnf5ghrv3czi4lh5yc8n8690m3b8i85s46k7lya2k0rasvac4"; depends=[GBJ Matrix seqminer]; }; summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; }; summarytools = derive2 { name="summarytools"; version="0.9.4"; sha256="1n695baz56mg4f13xjjadfq0xalw5xsn6xicil0yap5hgi8fsr3a"; depends=[checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools RCurl tibble tidyr]; }; - sunburstR = derive2 { name="sunburstR"; version="2.1.1"; sha256="0r46ca3pvnvak7dqslbn64dg8h6d50nlhh0wrsxi8vcwgsycaf6y"; depends=[d3r dplyr htmltools htmlwidgets]; }; + sunburstR = derive2 { name="sunburstR"; version="2.1.3"; sha256="1zxy1zyi8sp26vicxjh7jx167qwnmvj1h6hpyj6398cbzcx7dvy7"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.5.0"; sha256="1chkl297km313m89h9mbp7vnpz188fhzz5dn8x5cjkqy0mm6c0qc"; depends=[data_table lubridate magrittr]; }; sundialr = derive2 { name="sundialr"; version="0.1.3"; sha256="1bpqfxbg187g113nzsgk5pnfw9ldg9v7x52frrw8wjjs8b3c0v8z"; depends=[Rcpp]; }; - supc = derive2 { name="supc"; version="0.2.1"; sha256="121dy7ymvxvq3ksf17hg0df74ycd2nag2z2ggnw4p2rwzj99vgc5"; depends=[BH Rcpp]; }; + supc = derive2 { name="supc"; version="0.2.2"; sha256="0b7safpg766mzi2qiwyyf9wn5pcpcb9w7dn5qb3kjalijvcqz7mp"; depends=[BH Rcpp]; }; supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; }; supcluster = derive2 { name="supcluster"; version="1.0"; sha256="1rkd4bpzzvzbmqaj907pqv53hxcgic0jklbsf5iayf0ra768b5w6"; depends=[gtools mvtnorm]; }; superMDS = derive2 { name="superMDS"; version="1.0.2"; sha256="0jxbwm3izk7bc3bd01ygisn6ihnapg9k5lr6nbkr96d3blpikk04"; depends=[]; }; superbiclust = derive2 { name="superbiclust"; version="1.1"; sha256="1gzjbzbl8y1nzdfhyd6dlrwjq8mwj43a26qav84s1bdzwx6dra48"; depends=[biclust fabia Matrix]; }; superdiag = derive2 { name="superdiag"; version="1.1"; sha256="0pa3mv74riabpm7j4587zww2364fszzlw48ijj1apcgz8y6pyqbw"; depends=[boa coda]; }; superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; - superml = derive2 { name="superml"; version="0.4.0"; sha256="0lq2mjlapihnz8pfb8y3zzv460pdplkyh0dbsm7cdhr01shwz4n9"; depends=[assertthat data_table doParallel Metrics R6]; }; + superml = derive2 { name="superml"; version="0.5.0"; sha256="1h5jpafriw5drkmwyyk42fn33qq9qvc19wmi13mfnpkhc67xmlyp"; depends=[assertthat data_table doParallel Metrics R6]; }; supernova = derive2 { name="supernova"; version="2.1.1"; sha256="1vjx0mfnqksgvcgn8hfvpx8j3q8791yifdsaqjqkhc7h56r9gcc5"; depends=[magrittr stringr]; }; superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; suppdata = derive2 { name="suppdata"; version="1.1-1"; sha256="1sysd5w59y9hkm1ab8m9i1d976dv6cxchssc86s27bsibhsj2blc"; depends=[httr jsonlite rcrossref xml2]; }; support = derive2 { name="support"; version="0.1.4"; sha256="1yahhb9l2f3129av4cj4q77q1s0nfszzd6z7dqkfpnjvvk8gzdq7"; depends=[BH MHadaptive randtoolbox Rcpp RcppArmadillo]; }; - support_BWS = derive2 { name="support.BWS"; version="0.2-0"; sha256="1yfjpr9v9zsbkysm3r6zk9r0a072g038lmj9wk4014a3rk9kmm80"; depends=[]; }; - support_BWS2 = derive2 { name="support.BWS2"; version="0.2-2"; sha256="1pykq297gz42n6scl5s6zjy33wjvcb5590vcrgysdigf3hqb22ra"; depends=[]; }; - support_BWS3 = derive2 { name="support.BWS3"; version="0.1-1"; sha256="1pzgc98har44kylrg04669lmmfn10pb3km5598p163nzh5s4ymgg"; depends=[]; }; + support_BWS = derive2 { name="support.BWS"; version="0.3-0"; sha256="1mylc1jys8j56qciscy8ra4dv0ig0swh2gyf3wv5q00v85n1wf92"; depends=[]; }; + support_BWS2 = derive2 { name="support.BWS2"; version="0.3-0"; sha256="0k9yvg0n4lzsq43r53r9f70hq1q3zfljjafj9ds2p3c6qzgs9chi"; depends=[]; }; + support_BWS3 = derive2 { name="support.BWS3"; version="0.2-0"; sha256="012kcvscz7m2is92r71731zc7xnp7pwyx30vivwjazrigp9bq1kl"; depends=[]; }; support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; + sur = derive2 { name="sur"; version="1.0.2"; sha256="13mkn153x9sgkmj2vchma5qz1zggxw5vf28v8sfbg0n77f4wjc1p"; depends=[learnr]; }; sure = derive2 { name="sure"; version="0.2.0"; sha256="0gwr2j321i2vq98rin5b1m4sl123dm1nih1ghcmj0zd1wd6x5x54"; depends=[ggplot2 goftest gridExtra]; }; surface = derive2 { name="surface"; version="0.4-1"; sha256="0z7fh09hjmxfmqzi588gjwqqlpj1a475aixrnvy911lkx3zfk146"; depends=[ape geiger MASS ouch]; }; suropt = derive2 { name="suropt"; version="0.1.1"; sha256="0fm3vq3d0r4ahjgdmxm06yyakngssryzvdd1w0my34m0nvk6cbq4"; depends=[DiceKriging DiceOptim dplyr emoa GenSA ggplot2 GPareto lhs mco pso purrr rgenoud tibble tidyr]; }; @@ -13885,7 +14153,7 @@ in with self; { survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; }; survRM2adapt = derive2 { name="survRM2adapt"; version="1.0-1"; sha256="1r3jvjbc2sb7b00s95b3sdx4d99rmrnd573fx1n4914ydiggi9nn"; depends=[survival]; }; survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; - surveillance = derive2 { name="surveillance"; version="1.17.1"; sha256="0fz37ah1ljylmn0sycc2pr1sp757c8iwrm6ijcsj21rzxxyajind"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; + surveillance = derive2 { name="surveillance"; version="1.17.2"; sha256="1gnyylil70qw06fnyhg38xqh9pmzqj5ykf79p66dvhv7zhjq95r7"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; survey = derive2 { name="survey"; version="3.36"; sha256="0xclsy4ram4k48vzh5m5bpmknnpwxnss85v73s4czsjj5ffjxwwh"; depends=[lattice Matrix minqa mitools numDeriv survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; @@ -13896,7 +14164,7 @@ in with self; { surveysd = derive2 { name="surveysd"; version="1.1.0"; sha256="0ab1f3z86idv3cy9nycqh4nnkcwachlm27pynlrn6g4jmcvcbj9b"; depends=[data_table dplyr ggplot2 laeken matrixStats Rcpp]; }; survidm = derive2 { name="survidm"; version="1.2.0"; sha256="0dgcxhf8x1aavr4n4aqanfc23zd62dyk3h05sa04611h6n9l8j9c"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; survivALL = derive2 { name="survivALL"; version="0.9.3"; sha256="0lnvs7b097sl21gvnfafdprzvh197p1q4nzzagkdf4xm1xw8pj0h"; depends=[cowplot desiR ggplot2 ggthemes survcomp survival viridis]; }; - survival = derive2 { name="survival"; version="2.44-1.1"; sha256="1faiwyg7x8y2kfzb66l4yc8br0mdlz4k20znmjrwq96dbzhm3cam"; depends=[Matrix]; }; + survival = derive2 { name="survival"; version="3.1-7"; sha256="1ij77bgfcjx29xkx5bck0sv4ybglpcmzzv9ilkinj8fqhhclbs8p"; depends=[Matrix]; }; survivalAnalysis = derive2 { name="survivalAnalysis"; version="0.1.1"; sha256="0y4hgskc36jrriy6577bnkvg1gmxs0x3pxiv3lma38a9lj71ivwf"; depends=[cowplot dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales stringr survival survminer tibble tidyr tidytidbits]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; @@ -13936,14 +14204,14 @@ in with self; { svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; svydiags = derive2 { name="svydiags"; version="0.3"; sha256="0xgizswdqs8cjac200sqv3ygvrnbcy74h92kgx4r6nv1fhlcljl3"; depends=[MASS Matrix survey]; }; - swCRTdesign = derive2 { name="swCRTdesign"; version="3.0"; sha256="053d7dhdhv61j30rdl6s0h0sfh28hjzljhj6d4n5sydhn0g2137x"; depends=[]; }; + swCRTdesign = derive2 { name="swCRTdesign"; version="3.1"; sha256="18ln02fnxkpjqi8a36wr2qr427hxrghkhfjx0384grmdg1mmkbf5"; depends=[]; }; swa = derive2 { name="swa"; version="0.8.1"; sha256="1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4"; depends=[ggplot2 reshape ROCR]; }; swagger = derive2 { name="swagger"; version="3.9.2"; sha256="13scbzv65qzxh7kfwlb2k47zgvv7fz085g5lki6zr5w6a33g45q9"; depends=[]; }; swamp = derive2 { name="swamp"; version="1.4.1"; sha256="01w44d7rqh6q9wpapd3g7rzllhbm2brwilmna9vk2dwqx57jyim6"; depends=[amap gplots impute MASS]; }; swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; }; swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; swdft = derive2 { name="swdft"; version="1.0.0"; sha256="0529rw8nsl48hwiy741alvrzg5d5q1nhnjshrsfwchm5kdv0igva"; depends=[]; }; - sweep = derive2 { name="sweep"; version="0.2.1.1"; sha256="0hfvgvzr5mh9niwpsr9jcly426dz457afrg4q5w13ahsasx7c9jg"; depends=[broom devtools dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; + sweep = derive2 { name="sweep"; version="0.2.2"; sha256="12mbkkinvv11s96bn61vww79xjivjshhg9m3lmza5y0512zm89k5"; depends=[broom dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; }; swephR = derive2 { name="swephR"; version="0.3.0"; sha256="0fk5wih3i5vpkcc9y1n30xwc1hyqgfgnad9jkdgdx0m31pn1y9j5"; depends=[Rcpp]; }; swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; }; @@ -14005,7 +14273,7 @@ in with self; { tables = derive2 { name="tables"; version="0.8.8"; sha256="1cgfwrnmgi1jhv9kj918mv0ib75hvprqjg0nb7ppih73kqpaw5m2"; depends=[Hmisc knitr]; }; tableschema_r = derive2 { name="tableschema.r"; version="1.1.0"; sha256="0ny683p9kaidj5bayz77hyvsaqg3jk87pb95271znk8hzhl2jlcj"; depends=[config future httr iterators jsonlite jsonvalidate lubridate purrr R6 RCurl rlist stringr urltools]; }; tabplot = derive2 { name="tabplot"; version="1.3-3"; sha256="0gv27igixcy5vqrk71ckyhlk4yhcprm8r2a2l0lgmn4rbsm20c6h"; depends=[bit ff ffbase]; }; - tabr = derive2 { name="tabr"; version="0.3.0"; sha256="0723yzjnv30bfs4v7ircn17hhpjx0w1hzls6bcqc3xi3awqzkbg3"; depends=[crayon dplyr ggplot2 magrittr purrr]; }; + tabr = derive2 { name="tabr"; version="0.3.5"; sha256="14lsqkn5xzxmnh23ppmv9b0pkqiyw82b2nnmnv56cpgv2ds6bv4h"; depends=[crayon dplyr ggplot2 magrittr purrr tidyr]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1.1"; sha256="0396a8hla508na1hmyyhfbl8w10dbg810cln2xyhhvxi7rr223dj"; depends=[]; }; tabula = derive2 { name="tabula"; version="1.3.0"; sha256="12fqkqky2amg9lzm7q1dc7j2i71cbm1mdpzgfkyjwgjkv87b896k"; depends=[ca ggplot2 rlang]; }; tabularaster = derive2 { name="tabularaster"; version="0.5.0"; sha256="0cqax6hq0pbxmqls3cs21cc86662wdzjyx4lkxw42dbw4v13f728"; depends=[dplyr fasterize gibble magrittr raster rlang sp spatstat spbabel spex tibble viridis]; }; @@ -14021,7 +14289,8 @@ in with self; { tailr = derive2 { name="tailr"; version="0.1.3"; sha256="0agm83zwj6f3bpicbn2pcwira05v2pbv0g7myc1x06jxbw1qbfwp"; depends=[foolbox glue rlang]; }; taipan = derive2 { name="taipan"; version="0.1.2"; sha256="192sy5pgq74vs31p7jfn6svdzf9mk9ybppzhp1rlki1bagmm5f1r"; depends=[shiny]; }; takos = derive2 { name="takos"; version="0.1.0"; sha256="0a26jmxccpyk36sah9nz7pqpkc1rd9kbwrvwh0r0zp7lwvxbjb8w"; depends=[baseline broom colorRamps data_table devEMF MASS minpack_lm pracma segmented sfsmisc smoother]; }; - tanaka = derive2 { name="tanaka"; version="0.1.0"; sha256="1j0xjklwrlzrh0078bk34qzk2fvv0fb3r2rak571hkm3xpl2g5zn"; depends=[isoband lwgeom raster sf]; }; + tanaka = derive2 { name="tanaka"; version="0.1.1"; sha256="0d7kqgl4kdmgvc8an0h1jqh8h4qw7mgdqmghxs49ssw3db6ir6lh"; depends=[isoband lwgeom raster sf]; }; + tangles = derive2 { name="tangles"; version="0.8.1"; sha256="06a5hn5hkvgr6pcjz3n0vi1zwmv00wypi5f62agqh8mas80v44vh"; depends=[digest raster sp]; }; tangram = derive2 { name="tangram"; version="0.4"; sha256="1yj5vwc8jkiic4zjag9k7w3j6dibqw5zsi78q6gssshsi9z0zbgy"; depends=[base64enc digest htmltools magrittr R6 stringi stringr]; }; tapkee = derive2 { name="tapkee"; version="1.1"; sha256="1s8710m4drhnycfv27bv1w7vqc99dvbcn8zxkahq0lrsx7q8i5mz"; depends=[]; }; tashu = derive2 { name="tashu"; version="0.1.0"; sha256="04xvmbcwi84zg1pqw21nmrbnkyx184wc200vl1vhmwxggq1i60np"; depends=[dplyr drat ggplot2 lubridate plyr randomForest RColorBrewer reshape2]; }; @@ -14032,7 +14301,7 @@ in with self; { tawny = derive2 { name="tawny"; version="2.1.7"; sha256="1b2v0cgkmhzxy36dcdn6hnbqk6l5ac5c3myvwryf7wlp19xi786d"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.5"; sha256="1vg0hv91dif6cfqfzrf7m1qbk57fp8v97fp88whwmvs83yd521hq"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; taxa = derive2 { name="taxa"; version="0.3.2"; sha256="1kiffyfpgapap6m2k3wx7p89kzpdyk48nwbmqvfa883kvg0ddzcy"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; - taxize = derive2 { name="taxize"; version="0.9.8"; sha256="11b486jyd447np8ri4s0ywry7n0xdyw42vspcdpxb11pli9x4x45"; depends=[ape bold cli crayon crul data_table foreach jsonlite natserv phangorn plyr R6 reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; + taxize = derive2 { name="taxize"; version="0.9.91"; sha256="0ncglmj0nzk60dvmngzskr2psn0bi2wj8jr628kczln2qz2hagff"; depends=[ape bold cli crayon crul data_table foreach jsonlite natserv phangorn plyr R6 reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; }; taxlist = derive2 { name="taxlist"; version="0.1.6"; sha256="0p68izdhqggra14g6n93124qnwrxmdy5f9x0617fmix5yc23rww3"; depends=[foreign stringdist taxize vegdata]; }; taxonomizr = derive2 { name="taxonomizr"; version="0.5.3"; sha256="0hxvcbyr5b3sxqy5kw1q17qx7c2q90a6x79r9bmjn6c2lnrqn83i"; depends=[data_table R_utils RSQLite]; }; @@ -14041,8 +14310,8 @@ in with self; { tbd = derive2 { name="tbd"; version="0.1.0"; sha256="1wmfy3p82gckhfsslxzapryfygmircii7x24j6ysfyx52gy8iwf5"; depends=[numDeriv]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; tbl2xts = derive2 { name="tbl2xts"; version="0.1.3"; sha256="0yy0cpsflwx7fbql3vh0l87cvqgn0ghdqal4m7l9aplqhzdwxs3r"; depends=[dplyr lazyeval PerformanceAnalytics xts zoo]; }; - tbm = derive2 { name="tbm"; version="0.3-0"; sha256="03bh98jn5rm3c159sbyx830cjf8yhpbn8jdgrmnqrwgr1fp5hdqf"; depends=[basefun coneproj mboost mlt sandwich variables]; }; - tbrf = derive2 { name="tbrf"; version="0.1.2"; sha256="03n9s2n5y9d669l78v6s2dbk3sz51g5v28301ng2w082njrsvxhv"; depends=[boot dplyr lubridate purrr rlang tibble tidyr]; }; + tbm = derive2 { name="tbm"; version="0.3-1"; sha256="1nakiixh833jwfz5zp3kz9zc09373zd8ydy94x4v9vxxwqp3zvl5"; depends=[basefun coneproj mboost mlt sandwich variables]; }; + tbrf = derive2 { name="tbrf"; version="0.1.3"; sha256="1g6ll9vqhszas3czpnvvxhrih4b1h10dhn40ljh4206m27mzl8v9"; depends=[boot dplyr lubridate purrr rlang tibble tidyr]; }; tcR = derive2 { name="tcR"; version="2.2.4"; sha256="17g26cq6zpcmg9kv32v0rvyqmml5wkbwra7p8f1cdzyc0zajbvn2"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; tcgsaseq = derive2 { name="tcgsaseq"; version="1.8.1"; sha256="1v5b3qghygb81lqc2h1fijgw856b1778xndppq7r4b0zhhvb81ac"; depends=[CompQuadForm ggplot2 GSA KernSmooth statmod]; }; tcl = derive2 { name="tcl"; version="0.1.0"; sha256="1ssqx50ii6j2y5n2nxn5ndp20nrjss0xf0fqp8aiwlgnm3d1zggn"; depends=[eRm lattice MASS Matrix numDeriv]; }; @@ -14052,18 +14321,18 @@ in with self; { tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; tdigest = derive2 { name="tdigest"; version="0.3.0"; sha256="17axsir4xig3vm3sc2gziy9n0p80b14vg52nwys23bzkfp0n63bm"; depends=[magrittr]; }; tdr = derive2 { name="tdr"; version="0.13"; sha256="0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15"; depends=[ggplot2 lattice RColorBrewer]; }; - tdsc = derive2 { name="tdsc"; version="1.0.0.1"; sha256="17nr5fa4f16ww8si8qikbqmixl38jxjy185b80ff2i5v4129mnwd"; depends=[data_table]; }; + tdsc = derive2 { name="tdsc"; version="1.0.2"; sha256="19wd7gbpb23x55jzp0snnqm8ccnga3bfgr0mbhh31frkf6453721"; depends=[data_table moments]; }; tdthap = derive2 { name="tdthap"; version="1.1-11"; sha256="15qlj2bivvz3pizd8dq34wczbkbxhzqh3cqp1ixkdkprlyvcxj5k"; depends=[]; }; tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; teachingApps = derive2 { name="teachingApps"; version="1.0.4"; sha256="0wi25wdpkz7kh8r1s42wa9kiky8ilmcg8kgw0j1caygwg0bml2fa"; depends=[actuar BH d3heatmap data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI networkD3 pacman plotly radarchart Rcpp RcppEigen RcppNumerical rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; }; tealeaves = derive2 { name="tealeaves"; version="1.0.0"; sha256="0hzih93h8c9gqvsmfaldq9jaw8hgvd4kmrlqlaqr6xhi6zhjqhf1"; depends=[crayon dplyr furrr future ggplot2 glue magrittr purrr rlang stringr tidyr units]; }; - teamcolors = derive2 { name="teamcolors"; version="0.0.2"; sha256="1dns9z03n2bf8bda965wx243dacdm6ixp7zgzkvqr5mifcgmfafh"; depends=[dplyr ggplot2]; }; + teamcolors = derive2 { name="teamcolors"; version="0.0.3"; sha256="1p2fx30j4wplicd30b8677jdmg78fpp6cbd3nqmx8xbs01gwix9w"; depends=[dplyr ggplot2]; }; teamr = derive2 { name="teamr"; version="0.0.1"; sha256="01gngws8lf093598wlzrv4ls74avsli6ij33v1plqgc0znyaw4s2"; depends=[httr jsonlite R6]; }; teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; }; telefit = derive2 { name="telefit"; version="1.0.1"; sha256="05qnnp7bsv6q9230kikwk1r80f6v809cc2nv117w08nax4423vwx"; depends=[abind coda cowplot doRNG dplyr fields foreach ggplot2 gtable itertools mvtnorm raster Rcpp RcppArmadillo RcppEigen reshape2 scales scoringRules SDMTools sp stringr]; }; telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; - telegram_bot = derive2 { name="telegram.bot"; version="2.3.1"; sha256="1mzmc3gvma90mrzyn3w8s3jwmq7apqy4wacv0j6zd99a96nj855b"; depends=[curl httr jsonlite R6]; }; + telegram_bot = derive2 { name="telegram.bot"; version="2.4.0"; sha256="1bvfnr6k0zxdawrf63yh8wj9hcgq1xvy791xbqhiy0isaa86yfw9"; depends=[curl httr jsonlite R6]; }; tempR = derive2 { name="tempR"; version="0.9.9.15"; sha256="00xxrwzbqcsvb50xcrr4aii4fjcfa8bc25jn0zvg4dxmww8w4s1r"; depends=[]; }; tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; }; @@ -14077,22 +14346,24 @@ in with self; { tensorBSS = derive2 { name="tensorBSS"; version="0.3.5"; sha256="1m4g9jr2s37xys2q4gv6rqknrznd4nrppa7qrgygqywwlmnyid44"; depends=[ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; tensorflow = derive2 { name="tensorflow"; version="2.0.0"; sha256="1cz0l6blr8wan47lslq4lx0aafk61gjxwm6b3nn8zwgx849nqyr4"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; tensorr = derive2 { name="tensorr"; version="0.1.1"; sha256="18xdvp328h96jn8y1iayxh7cyz2s8j5nn43nq18pyaxq271hkfyh"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; + tensorregress = derive2 { name="tensorregress"; version="1.0"; sha256="0gx2skh175gs2cmihqaklwadnp777xcfimd66w3wh18qiz66ggaz"; depends=[MASS pracma rTensor speedglm]; }; tensorsparse = derive2 { name="tensorsparse"; version="1.0"; sha256="1qy6s58nkqq4spg7sapq3jafmxda0mx0j0cqjaj9pd34qqxifglf"; depends=[clues fields glasso glmnet HDCI mvtnorm RColorBrewer reshape rgl rTensor viridis]; }; tensr = derive2 { name="tensr"; version="1.0.1"; sha256="1z6b3ra7fgn88mxbhsq65x3frj5j7p17n119s9kbw7sg9y633vfx"; depends=[assertthat]; }; tergm = derive2 { name="tergm"; version="3.6.1"; sha256="03yd4l317airz84jfjyczjx43wi6sraid58lmxivm29xjk52xpi1"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; ternvis = derive2 { name="ternvis"; version="1.2"; sha256="057i6i3ygxrin0npc18gsg3dpdldzafyb5sr6lix5mhy6b09lkxf"; depends=[dichromat maps quadprog]; }; tesseract = derive2 { name="tesseract"; version="4.1"; sha256="1a7cf48n7hdd6inqz23ifqhq6kx6wxri34a79ns2vxaj6f4llxf0"; depends=[curl digest pdftools rappdirs Rcpp]; }; + test2norm = derive2 { name="test2norm"; version="0.1.1"; sha256="11by5a1j6613akxj1nc16r07jfwxr1izkpvymr9yycnddiqyp42c"; depends=[mfp]; }; testDriveR = derive2 { name="testDriveR"; version="0.5.1"; sha256="0wjdqvsyv33fsg1lljp9m0bhz38mpfgpgickgj4zdspc9x6lbnv6"; depends=[]; }; testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; }; testequavar = derive2 { name="testequavar"; version="0.1.2"; sha256="12qfy53rkrasxphcfmch5bmdlvlybd27jfg3azsi3fg4zk4qgdw2"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; testextra = derive2 { name="testextra"; version="0.1.0"; sha256="0n5d3a4fnqb9bc47sha5zyi18gd9k6hm1jkjlb7apk43zry6n0y8"; depends=[assertthat parsetools pkgcond postlogic purrr rlang stringi testthat]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; - testit = derive2 { name="testit"; version="0.10"; sha256="0jhlqv5qfms4mwhaaicn6c3rlijkyvb5akk0qazb37a0msjns0mh"; depends=[]; }; - testthat = derive2 { name="testthat"; version="2.2.1"; sha256="0y0bvggm4pzkzp6xn7b8cf3ybqp9ijxkhhyp3z49a9iipc90bvk7"; depends=[cli crayon digest evaluate magrittr praise R6 rlang withr]; }; + testit = derive2 { name="testit"; version="0.11"; sha256="13iq4p8xzng88miizf04yv6z8vk7zhg1c8kd2h6swcmhqzq29yqj"; depends=[]; }; + testthat = derive2 { name="testthat"; version="2.3.1"; sha256="0m8xchdpgn9iwj6gb2qw46zr85v9zf1gkbr9nnahmy5sp1s9bbky"; depends=[cli crayon digest ellipsis evaluate magrittr pkgload praise R6 rlang withr]; }; testthis = derive2 { name="testthis"; version="1.1.0"; sha256="1ci7q25f8lq7mvigdj48gvpi75j08s0kll72kwa88xyfx9q8m3yl"; depends=[assertthat devtools fs magrittr pkgload rprojroot stringi testthat usethis]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; - texPreview = derive2 { name="texPreview"; version="1.3.2"; sha256="0gg46iy4s17gri28g0nvqibm8wy4c6mj1hc5iyj6dsn4jskvpfmy"; depends=[base64enc htmltools magick rematch2 rstudioapi svgPanZoom whisker xml2]; }; + texPreview = derive2 { name="texPreview"; version="1.4.1"; sha256="0vjplajgrzz97a9lrrx43vx05djyi5dq22l6smjywn7m1ij6c9gv"; depends=[base64enc details fs htmltools knitr lifecycle magick magrittr rematch2 rstudioapi svgPanZoom whisker xml2]; }; texmex = derive2 { name="texmex"; version="2.4.2"; sha256="01qx4f5f0gf0xz85lzxxv79fp7syd7x484iw711rbnv0nw3aqwa2"; depends=[ggplot2 mvtnorm Rcpp]; }; texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; }; text2speech = derive2 { name="text2speech"; version="0.2.5"; sha256="0wc9c6sgv2p6qq8n9cmf143gn8ijps5ncwnkjq3q8m7558m6f24j"; depends=[aws_polly aws_signature dplyr googleAuthR googleLanguageR httr magrittr mscstts tuneR]; }; @@ -14118,21 +14389,23 @@ in with self; { textstem = derive2 { name="textstem"; version="0.1.4"; sha256="1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2"; depends=[dplyr hunspell koRpus koRpus_lang_en lexicon quanteda SnowballC stringi textclean textshape]; }; textutils = derive2 { name="textutils"; version="0.1-11"; sha256="12vx89k49js7k7h2ay1qx345infr5gns8bhvlm3jinrm9saj0f54"; depends=[]; }; tfCox = derive2 { name="tfCox"; version="0.1.0"; sha256="06mbiz1jwp8mv5dbwyvdvy1wpp8s3xp9hhsm94vrbvjaxg680g28"; depends=[Rcpp survival]; }; + tfautograph = derive2 { name="tfautograph"; version="0.1.0"; sha256="0bia0hqwwhf2iwbzy6wa9r72fl00k8pm5ll74bb9w372r129i5wh"; depends=[reticulate tensorflow]; }; tfdatasets = derive2 { name="tfdatasets"; version="1.13.1"; sha256="19szgpb040v33hicrqdigjpg3z6jph0fxx6rh8ln16hk4sb2rd2d"; depends=[magrittr reticulate rlang tensorflow tidyselect]; }; tfdeploy = derive2 { name="tfdeploy"; version="0.6.1"; sha256="1vbxyvmzaafbwp1pmvzn16zyl4nz85787m79gn7iazh9zw9f7j34"; depends=[httpuv httr jsonlite magrittr reticulate swagger tensorflow]; }; tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; }; tfestimators = derive2 { name="tfestimators"; version="1.9.1"; sha256="0da34iy7fyfzhbvaj8494sl6nrmhcfbqcr71l95ziaxgb8285ndm"; depends=[forge magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; tfio = derive2 { name="tfio"; version="0.4.0"; sha256="1ah37sf3qf099bv50gsz1ny13vrp67ry0famabihc5kmqk9viyhg"; depends=[forge magrittr reticulate tensorflow tfdatasets]; }; tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; + tfprobability = derive2 { name="tfprobability"; version="0.8.0.0"; sha256="1h32r15yxxzmvqp0gs2k5m2c6z1jkgfwj757sl6pfhwpr7av9zqp"; depends=[keras magrittr reticulate tensorflow]; }; tframe = derive2 { name="tframe"; version="2015.12-1.1"; sha256="1yff22jzh1mp73zbz2mav6z8m42lylfjhb8dgxj4337fv3if3i13"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; tfruns = derive2 { name="tfruns"; version="1.4"; sha256="1mqv5m13qm1dqz0622jd5ayb3nk76lfa657y2hyqv261flxizhvg"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; tfse = derive2 { name="tfse"; version="0.5.0"; sha256="05q75xsiy955xwgchagk7l7725y6mylp5lj5284xm7y2xh197zp3"; depends=[dapr magrittr]; }; - tgcd = derive2 { name="tgcd"; version="2.1"; sha256="0anaycfsjax62iasly9b0mmmhqfcl11a8ncavr1c1i7rikandj0i"; depends=[]; }; tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; }; tgp = derive2 { name="tgp"; version="2.4-14"; sha256="1l3kssjkh5sbrh75qdpmynjfnidgz8vmzq1jml1qm1yfwval8ak1"; depends=[maptree]; }; tgram = derive2 { name="tgram"; version="0.2-3"; sha256="0vlnry8drq3fqfy8dk50pcwcx9dj657kx6s19fs2b6acigkr4g7w"; depends=[zoo]; }; thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; }; + thectar = derive2 { name="thectar"; version="1.0.0"; sha256="1qh0qzg0ybb38kzm56xxlvhm201pdjm16aky5f1fdflcsszgy8mx"; depends=[proxy smacof]; }; theiaR = derive2 { name="theiaR"; version="0.2.0"; sha256="1zvgg3xs1xlmg7gkv7pax7w5xgarvya4nvv4d78iv7p02bzckbxv"; depends=[askpass httr R6 raster tiff XML]; }; themetagenomics = derive2 { name="themetagenomics"; version="0.1.0"; sha256="1p8qyvll6a9yx2akny1087f73r6p5zi6cf1si7b8i786bcs9khwj"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; @@ -14142,7 +14415,7 @@ in with self; { thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; }; thinkr = derive2 { name="thinkr"; version="0.13"; sha256="1j43mjznriq8d5ki50rb41vgmzj2gq8sahvhj11742ggxd0bzvdb"; depends=[assertthat devtools dplyr ggplot2 lazyeval lubridate magrittr officer rvg stringi stringr tidyr]; }; thor = derive2 { name="thor"; version="1.1.0"; sha256="0ard98z5kb9r6k4qvnbqq4mx4x6ydhd4b6ppzrp19yilvdb8wgjp"; depends=[R6 storr]; }; - threeBrain = derive2 { name="threeBrain"; version="0.1.3"; sha256="02jmr2wgmw0qqczpmnlivwrh5s9x36a8rbz6j8dnj30j6hrk1jqi"; depends=[base64enc crayon gifti htmltools htmlwidgets jsonlite R6 reticulate shiny startup stringr]; }; + threeBrain = derive2 { name="threeBrain"; version="0.1.4"; sha256="1lp1wy7c9927156nvchah7rhdgblfg8vx178k106nhaa1a56in04"; depends=[base64enc crayon gifti htmltools htmlwidgets jsonlite oro_nifti R6 reticulate shiny startup stringr]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; threejs = derive2 { name="threejs"; version="0.3.1"; sha256="1s3rdlzy7man6177ycayg6xsh6k8y1r9rdj9yzn3b93j2rs0nxbi"; depends=[base64enc crosstalk htmlwidgets igraph]; }; threewords = derive2 { name="threewords"; version="0.1.0"; sha256="083y5i4qyl1wj017wy5ywl2yx9wvrpjl9g9k9clvnrbwzbycx2cg"; depends=[httr]; }; @@ -14153,32 +14426,37 @@ in with self; { thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; thurstonianIRT = derive2 { name="thurstonianIRT"; version="0.9.0"; sha256="0jjrdx5f581h8vh0fw4p85mlqfym467azp7cln48wzi1s28m9mn2"; depends=[BH dplyr lavaan magrittr MplusAutomation mvtnorm Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidyr]; }; tibble = derive2 { name="tibble"; version="2.1.3"; sha256="06jfayiip8j8ibdhw3fvxn4n8aqbqhwanrszpzlsf92xdfgfm34s"; depends=[cli crayon fansi pillar pkgconfig rlang]; }; + tibbleOne = derive2 { name="tibbleOne"; version="0.1.0"; sha256="01v3jqxps0d27hg50d38zzh8lypr5735xsdggpc6zmqd39cbnjsp"; depends=[dplyr flextable forcats glue kableExtra knitr labelled lifecycle magrittr officer purrr rlang stringr tibble tidyr tidyselect vctrs]; }; tibbletime = derive2 { name="tibbletime"; version="0.1.3"; sha256="0p42g73cmw460v372317as50ijvsg49avg9cf222ypf1v0ls3ig1"; depends=[assertthat dplyr glue hms lifecycle lubridate purrr Rcpp rlang tibble tidyselect vctrs zoo]; }; tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; tidyLPA = derive2 { name="tidyLPA"; version="1.0.4"; sha256="154jikhm1dnriwdib5ncmkjixlihs3b74ilpi225h8ijq84n31ai"; depends=[dplyr ggplot2 mclust mix MplusAutomation tibble]; }; tidyRSS = derive2 { name="tidyRSS"; version="1.2.11"; sha256="0ikizs24frvv888zxris6j41lfcvy7hrp5z3h3mk5vxdlqi3rag7"; depends=[dplyr httr jsonlite lubridate magrittr purrr sf stringr testthat tibble xml2]; }; - tidyUSDA = derive2 { name="tidyUSDA"; version="0.2.0"; sha256="1jxg6q7h90zllm35h2vx5r0y6zihxzvn29pa9c8plfgi4b5pskky"; depends=[dplyr fuzzyjoin ggplot2 jsonlite keyring magrittr nlme rgdal rgeos sf tigris]; }; + tidyUSDA = derive2 { name="tidyUSDA"; version="0.2.4"; sha256="0mlvjrhrbnvck7d1ml48yzaq4gks5m5r9cdnz8kqvaffwjwbyr2q"; depends=[crayon curl dplyr fuzzyjoin ggplot2 jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis]; }; tidybayes = derive2 { name="tidybayes"; version="1.1.0"; sha256="1mq6gqr66pqrwdmnk3fmfi508ds086k7jnlazi5mczn4r6pdyzd7"; depends=[arrayhelpers coda dplyr forcats ggplot2 ggstance HDInterval magrittr plyr purrr rlang tibble tidyr tidyselect]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; tidycells = derive2 { name="tidycells"; version="0.2.1"; sha256="161g06ga4wk1sn2qp9ljjq9mrjmvwl2dcs1nc352alk6p7bjbj8p"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tibble tidyr unpivotr]; }; tidycensus = derive2 { name="tidycensus"; version="0.9.2"; sha256="0dlm5f24rw7zyf5wx1v1rsx1zkkff1c4zqgbysm9xzya059m4m14"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; tidycode = derive2 { name="tidycode"; version="0.1.0"; sha256="16chz6bbj28aa039s57j48qa5fhj9hlj8ijsqmbfp5ib8bnijgc4"; depends=[glue matahari pryr purrr rlang tibble]; }; tidycomm = derive2 { name="tidycomm"; version="0.1.0"; sha256="0xas6nr7fy612r0b5h8ncvirxhzy099zvhdzxbnskm3sa21046ni"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; + tidycwl = derive2 { name="tidycwl"; version="1.0.3"; sha256="0m92g6ykglpdygb41jacixanzwrn60lk8az0ygs6diffikyv8sk3"; depends=[dplyr htmlwidgets jsonlite magrittr visNetwork webshot yaml]; }; + tidydice = derive2 { name="tidydice"; version="0.0.4"; sha256="01ahmyk7jpsp03kffazy2b73i5z6466jh7y66flpqk5jyszghyr2"; depends=[assertthat dplyr ggplot2 magrittr purrr tibble]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.2"; sha256="1cnwmmmzp9kg4k7iy2kgb22bdllpnz257pv1ahy3l11zy6bl48fc"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp rlang tidyr]; }; + tidygeocoder = derive2 { name="tidygeocoder"; version="0.2.4"; sha256="0r37s3hfyqz4zqs7cwp72dhc6f1y7zfc22v9b0705bdbqnfllahn"; depends=[dplyr httr jsonlite purrr rlang stringr tibble tidyr tmaptools]; }; tidygraph = derive2 { name="tidygraph"; version="1.1.2"; sha256="1zpsarm74afbc7p5dlyb0whc09670qdcddw1ckb25cfc9hfh0hjn"; depends=[dplyr igraph magrittr pillar R6 Rcpp rlang tibble tidyr]; }; - tidyhydat = derive2 { name="tidyhydat"; version="0.4.0"; sha256="0k239xixq6x9xb51ipmxn7ph72ibqa9s9sp79gkabgawc0lij6q0"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; + tidyhydat = derive2 { name="tidyhydat"; version="0.5.0"; sha256="0bf8rnk0yhdjjs79d4s833z9j165cwvg3xdmqg3kc5yzc31m4hsg"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; tidyimpute = derive2 { name="tidyimpute"; version="0.1.0"; sha256="03b475nn206hxq3i0n7j1qws82rwwk5vqivmdg5mff44dvz4gl5s"; depends=[dplyr na_tools rlang]; }; + tidyjson = derive2 { name="tidyjson"; version="0.2.4"; sha256="1nbg7wg8r38ydvcp3kbxmmnayxrdkl3p7x0fjxny3bj9a0fp99y7"; depends=[assertthat dplyr jsonlite magrittr purrr tibble tidyr]; }; tidylog = derive2 { name="tidylog"; version="0.2.0"; sha256="04l9bjfjnc706ya19swywr489wldkr7n9cm6kkyws56kqb571zxv"; depends=[clisymbols dplyr glue tidyr]; }; tidymargins = derive2 { name="tidymargins"; version="0.1.0"; sha256="1r782h6a5fhk9yb9ixjbpq3a9g56j3xz1871fsndkfigbzz39w51"; depends=[assertthat dplyr forcats magrittr pkgcond purrr rlang tidyr tidyselect]; }; - tidymodels = derive2 { name="tidymodels"; version="0.0.2"; sha256="1hidjrayqxz1g7bn20pqs1bwyx4cxxqx9dq5lwqyfsij0ir0lia9"; depends=[broom cli crayon dials dplyr ggplot2 infer magrittr parsnip pillar purrr recipes rlang rsample rstudioapi tibble tidyposterior tidypredict tidytext yardstick]; }; + tidymodels = derive2 { name="tidymodels"; version="0.0.3"; sha256="07l33slvh38lpycz2v4slwz06v33ni9jqr5wv672gzcgirw5xy7p"; depends=[broom cli crayon dials dplyr ggplot2 infer magrittr parsnip pillar purrr recipes rlang rsample rstudioapi tibble tidyposterior tidypredict tidytext yardstick]; }; tidymv = derive2 { name="tidymv"; version="2.2.0"; sha256="0g550b0frgk4wy3sicsqqinffrlbqzghhcnvh3snci6xd7j37hmm"; depends=[dplyr ggplot2 itsadug magrittr mgcv rlang tibble tidyr]; }; - tidync = derive2 { name="tidync"; version="0.2.1"; sha256="1w6ciyk4024aad6japfar1pq4q9bygcgl5avzg2l8c7mcqd58rvl"; depends=[dplyr forcats magrittr ncdf4 ncmeta purrr rlang RNetCDF tibble tidyr]; }; + tidync = derive2 { name="tidync"; version="0.2.3"; sha256="1wjw3fmyj8f95f94zai58h8b6h0vqqlrw4c629jjgg8ayy7aay9p"; depends=[dplyr forcats magrittr ncdf4 ncmeta purrr rlang RNetCDF tibble tidyr]; }; tidypmc = derive2 { name="tidypmc"; version="1.7"; sha256="1fijlvdiw4vwm34wizm4xlm0x10vvpkldzk7rrla44apq7y2w3yq"; depends=[dplyr readr stringr tibble tokenizers xml2]; }; tidyposterior = derive2 { name="tidyposterior"; version="0.0.2"; sha256="1sdbar3ycnjqyjy664zyhr9xks48l6g6mw8p5scp31x3gdh352rs"; depends=[dplyr generics ggplot2 purrr rlang rsample rstanarm tibble tidyr]; }; tidypredict = derive2 { name="tidypredict"; version="0.4.3"; sha256="1mn14rd33irgcfrhm9d3zd71jdwdjay5z5xsmas8d9zmf05g0bcr"; depends=[dplyr generics knitr purrr rlang tibble]; }; - tidyquant = derive2 { name="tidyquant"; version="0.5.7"; sha256="1j987dmg74ah0vs8i46811phn84ccfyglwjmx2l2fg10naflcgzx"; depends=[cli crayon dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod rlang rstudioapi stringr tibble tidyr timetk TTR xml2 xts]; }; + tidyquant = derive2 { name="tidyquant"; version="0.5.8"; sha256="1wg2r2197j846kapra58z51r6xgp38g0m6rb3dvmz5awlkb9mdz8"; depends=[cli crayon dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod rlang rstudioapi stringr tibble tidyr timetk TTR xml2 xts]; }; tidyquery = derive2 { name="tidyquery"; version="0.1.0"; sha256="0jbkzm2vlzjfwn1849skkinywh7xa0n772qyrdhya7cg53xqp5vd"; depends=[dplyr lubridate queryparser stringr]; }; tidyqwi = derive2 { name="tidyqwi"; version="0.1.1"; sha256="0qrwclaz6cf2wg3rkg2nqjygflj0a1mx4cfbv5lx4r194km2dmr9"; depends=[dplyr furrr future httr jsonlite labelled magrittr purrr stringr tidyr xml2]; }; tidyr = derive2 { name="tidyr"; version="1.0.0"; sha256="1403j0xd93l0r7qj738ryd5zc79hbcghrzybib3c3hrnaq5s78cj"; depends=[dplyr ellipsis glue lifecycle magrittr purrr Rcpp rlang stringi tibble tidyselect vctrs]; }; @@ -14189,9 +14467,9 @@ in with self; { tidystringdist = derive2 { name="tidystringdist"; version="0.1.4"; sha256="1srxh5gyspcghzvnmpyq36ky608ipf71vv0s1jg01mgf2i5pdkf4"; depends=[attempt rlang stringdist tibble]; }; tidytext = derive2 { name="tidytext"; version="0.2.2"; sha256="1h1fpy86fha3jidb1xz0n3mfn7110mmf3dz9hpyfczqpyd62k3qq"; depends=[dplyr generics hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; tidytidbits = derive2 { name="tidytidbits"; version="0.2.1"; sha256="1hyqk8p4w1mjk9f497f2lh8hlic6fs37jnawqpfmrl39ylx4z6r7"; depends=[dplyr extrafont forcats magrittr purrr rlang stringr tibble tidyr tidyselect]; }; - tidytransit = derive2 { name="tidytransit"; version="0.5.2"; sha256="0j2gdljfq6jp833qr30v5nlrqh5vr0hl5hjh69ii8k4fdk0zj4v1"; depends=[assertthat data_table digest dplyr here hms htmltools httr lubridate magrittr readr rlang scales sf stringr tibble tidyr zip]; }; - tidytree = derive2 { name="tidytree"; version="0.2.8"; sha256="1hkddl8kj1g01dy7xiracx81f6b405b3ga2qp4wlrl552b9xxpby"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; - tidyverse = derive2 { name="tidyverse"; version="1.2.1"; sha256="0yy3fkjksgcn6wkbgsb0pbnmsyqs4m01mziqafhig578nixs4rxd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; + tidytransit = derive2 { name="tidytransit"; version="0.6.1"; sha256="0gm33d73k5rygdk6waaqlknkm65gg5xc6w85m3qhllch2akphh1j"; depends=[assertthat data_table digest dplyr hms httr lubridate magrittr readr rlang sf tibble tidyr zip]; }; + tidytree = derive2 { name="tidytree"; version="0.3.0"; sha256="1sbfwcxf9v1lhpa0392b49b6qfjrq7nlqz2djqzk5aknj9j64zvy"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; + tidyverse = derive2 { name="tidyverse"; version="1.3.0"; sha256="02gyys08qv2v4cl2d66gml4d31ipxay0iyfwwksvxyclx60wp2kd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr pillar purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.4"; sha256="19kcm9lfbkf61z0whfkn69b8m36qd1rvyhyk5y0cqbzkxvq8f70i"; depends=[piton Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; }; tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; @@ -14203,7 +14481,7 @@ in with self; { tigris = derive2 { name="tigris"; version="0.8.2"; sha256="03hlwykm14j8il53yslii8npfr42plj87maq120crhijafr6m3gd"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; tikzDevice = derive2 { name="tikzDevice"; version="0.12.3"; sha256="1d8cxb3srmfv54c61c25myiknkm43ysl69lqjknhaj682x0nyz2r"; depends=[filehash png]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; - tiler = derive2 { name="tiler"; version="0.2.1"; sha256="19w772wwv764i2b8i9ym6scf18kyci3albz27hw3mdhjy7i0acm3"; depends=[png raster rgdal sp]; }; + tiler = derive2 { name="tiler"; version="0.2.4"; sha256="1j1952vp0gnx0pnhqydipj4qw3cm05im502jc77wb2r1vklwimgb"; depends=[png raster rgdal sp]; }; tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; }; time2event = derive2 { name="time2event"; version="0.1.0"; sha256="1xkvarw53lcn07wqq7ly5znr6vjq7x72xb0piq5igdmwqmg2y26g"; depends=[survival timereg]; }; timeDate = derive2 { name="timeDate"; version="3043.102"; sha256="0wvl5pq261rvbgly7vilk3x3m9xk3ly6il1i5scwdf6srl1vlz1p"; depends=[]; }; @@ -14217,7 +14495,7 @@ in with self; { timelineR = derive2 { name="timelineR"; version="0.1.0"; sha256="1a2pdy5b9nca66khydrb50yzjglr78lxrgzisw6bp2simk5cix51"; depends=[dplyr futile_logger ggplot2 gtable lubridate mtconnectR stringr]; }; timelineS = derive2 { name="timelineS"; version="0.1.1"; sha256="076w8ckzzl59bc1gnwjgdwynnz86320hyfmzb0k26hl3k13jlmxs"; depends=[dplyr ggplot2 lubridate magrittr]; }; timeordered = derive2 { name="timeordered"; version="0.9.9"; sha256="0rfga5i6kckmlz2dzqb1pp634dl93wxp7v3kisxlbjl7mgnbck3k"; depends=[igraph plyr]; }; - timeperiodsR = derive2 { name="timeperiodsR"; version="0.1.0"; sha256="1pb27389ab8s2xz5zx4xi742hwbdf4bny311g7s7m2gvypc38cxi"; depends=[lubridate]; }; + timeperiodsR = derive2 { name="timeperiodsR"; version="0.2.0"; sha256="04m4dgz8xxvrpqhiz7rnf8in2cdbms9xj740p969zgybp1vlww7x"; depends=[lubridate]; }; timereg = derive2 { name="timereg"; version="1.9.4"; sha256="0jxm3h2sjc83klxdry5r1wgliadk6967cmiifycfpz282vpfxx7v"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.4.1"; sha256="1ghb3lg63fs9zx34l5qczv39mdccnmqzlc74l1zhb8qmsg8sm1g2"; depends=[data_table DBI jsonlite openxlsx RPostgreSQL shiny xtable xts zoo]; }; @@ -14232,7 +14510,7 @@ in with self; { tinter = derive2 { name="tinter"; version="0.0.1"; sha256="1zw5a79mryqighf8b6gidsi30001749sllpwqwbck26cyal6m8y6"; depends=[checkr]; }; tinyProject = derive2 { name="tinyProject"; version="0.6.1"; sha256="0cflnfp5mib3j1y3n5yvi867h5a7z6xr6163gq9y9b6nrl2skxfk"; depends=[brew R_utils]; }; tinytest = derive2 { name="tinytest"; version="1.1.0"; sha256="1y3f0x56xagf9m5wr2b26qahww13p8i2s66yr51xy9pqxdyjh2yl"; depends=[]; }; - tinytex = derive2 { name="tinytex"; version="0.16"; sha256="1dadq9l0527v038b1k1dyfs0dklsgxnmplls3qhqprfgskif8mga"; depends=[xfun]; }; + tinytex = derive2 { name="tinytex"; version="0.17"; sha256="0mgxrbj4gam2gvxfk26nq820vsfjggj81m2l7j9m8vp361k15r0w"; depends=[xfun]; }; tiobeindexr = derive2 { name="tiobeindexr"; version="0.1.1"; sha256="09vw83hkf7lgd3xyhbmqkyv57g3dz856230xkf8630jiicfvcg3b"; depends=[rvest xml2]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tippy = derive2 { name="tippy"; version="0.0.1"; sha256="0kkyi4s4ffpyjyfl89cd5y788ab1p253rx179k422y3y1z6w1md7"; depends=[htmltools htmlwidgets jsonlite shiny]; }; @@ -14242,19 +14520,20 @@ in with self; { titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titeIR = derive2 { name="titeIR"; version="0.1.0"; sha256="047vidn3zydbjijwgz6qm2d9j2ny8ng2sv5jzm8zb300y7k2426c"; depends=[Iso]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; - tkRplotR = derive2 { name="tkRplotR"; version="0.1.1"; sha256="0fr30c2xjgpjh0pkqv0m7g413wkzzffbak7ak26k7bsi2ls341qa"; depends=[]; }; + tkRplotR = derive2 { name="tkRplotR"; version="0.1.2"; sha256="146jqjnbxqsph804ysd2jrcmm5qvqa7yi4f41sq0myjlkqvd6ndk"; depends=[]; }; tkrgl = derive2 { name="tkrgl"; version="0.8"; sha256="1c5jiahqpf3nfybkzmks785dlkchjdisvknxkb0biv3xj9nzgz14"; depends=[rgl]; }; tkrplot = derive2 { name="tkrplot"; version="0.0-24"; sha256="04gk48vm8ilj1n3b3ir66pcfv504ra4rlgc0ll4ixbnp6w566wr8"; depends=[]; }; tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; }; tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; }; + tlrmvnmvt = derive2 { name="tlrmvnmvt"; version="1.0.0"; sha256="0qfpmh8kbakx7am64pvlcfw5w33p72c15gj53chmyc119l4vv1lg"; depends=[BH Rcpp RcppEigen]; }; tls = derive2 { name="tls"; version="0.1.0"; sha256="183b5m70s2whlgp9s1gb4xnylhlp4hnh3lw6b8f2vx4kahaid763"; depends=[]; }; tm = derive2 { name="tm"; version="0.7-6"; sha256="0spv43kjbpxq3rdxx8ysgrncjyc35ydiwk7gp8n4sig45iqyz59r"; depends=[BH NLP Rcpp slam xml2]; }; tm_plugin_alceste = derive2 { name="tm.plugin.alceste"; version="1.1"; sha256="0wid51bbbx01mjfhnaiv50vfyxxmjxw8alb73c1hq9wlsh3x3vjf"; depends=[NLP tm]; }; tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-8"; sha256="0z843i2wlmx75748p95jz3j45d9bzmlmqa3awgya24k7bdhpd6kd"; depends=[DSL NLP slam tm]; }; tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; }; - tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.7"; sha256="1zcddarjd083p3sly49wvsnbn6bmpx5wd1bqm3acgydxk8y84nif"; depends=[NLP rvest tm xml2]; }; - tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.4.0"; sha256="0q4njhfpwqym9d8xfbb577vn6g9ks4nkpb4bh6j31nzg7yp96av7"; depends=[ISOcodes NLP tm xml2]; }; + tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.8"; sha256="1gdkflz2g1vmqzv4p65w6zfynnx0fls7xyvhzg4li4kjg2xf6l75"; depends=[NLP rvest tm xml2]; }; + tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.4.1"; sha256="0c094z83mcq8blc8w7kvy91d28qqcx6f6193p3frpviznlaq21xk"; depends=[ISOcodes NLP tm xml2]; }; tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.2-1"; sha256="0rn8jqv622qmc0zkz534ka5qnbca2rlabxm3vjbqplr6fh1ahwb1"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; tm1r = derive2 { name="tm1r"; version="1.1.3"; sha256="1r1va052aaya70pvvn950833w0q0sbd67yyg3m2qdikgniq3dn6z"; depends=[httr jsonlite]; }; @@ -14263,7 +14542,7 @@ in with self; { tmbstan = derive2 { name="tmbstan"; version="1.0.2"; sha256="1g4b415k36wij028xz15kwpv8hmx92kznsp231bnrprzw2vrninr"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-13"; sha256="0rf8mz6kdm83pm85kzfyzb8kd3iwaxv5bgphjpxlnq6z32m9yds7"; depends=[]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; - tmle = derive2 { name="tmle"; version="1.3.0-2"; sha256="0krcyky19p60mkq29dvmcfc5jrv38wy0jv8xqqq5glh6yjyyslaj"; depends=[SuperLearner]; }; + tmle = derive2 { name="tmle"; version="1.4.0.1"; sha256="009mndjjbbq8g02a053gdisxnxj4p06ysnmkbrw04vj9w1zpnph7"; depends=[glmnet SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; tmod = derive2 { name="tmod"; version="0.40"; sha256="157m5jjkfd7g9aih5zylxzwkkdryj9l6yapgwjqydvwj6ab6k67l"; depends=[beeswarm plotwidgets tagcloud XML]; }; tmpm = derive2 { name="tmpm"; version="1.0.3"; sha256="1fqk39zyc07gh0ygi7pfljlnj6ih37jsb7bcxm05zcd4796wil8j"; depends=[reshape2]; }; @@ -14276,13 +14555,14 @@ in with self; { toOrdinal = derive2 { name="toOrdinal"; version="1.1-0.0"; sha256="0zg4zk7jx8s57g8nb0jw7r7gss00349jmkglf6sz26p7jldpgmff"; depends=[crayon testthat]; }; todor = derive2 { name="todor"; version="0.0.5"; sha256="1zv6bky5v14csq3pmyy7qzmy680pg3qrj1zghqixsf54aqm7h96q"; depends=[rex rstudioapi stringr]; }; togglr = derive2 { name="togglr"; version="0.1.33"; sha256="105c9vxa67bqccj31ksk5myfd0v7v0wbz6qqjhxqndlg7v6ggfzc"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr parsedate prettyunits purrr rstudioapi]; }; - tokenbrowser = derive2 { name="tokenbrowser"; version="0.1.0"; sha256="1kbw5bsghhpxd1742wgq2pw2y52s2vhbk0w8qiw6qagvx2dq5z52"; depends=[Rcpp stringi]; }; + tokenbrowser = derive2 { name="tokenbrowser"; version="0.1.1"; sha256="0sslli1m4lrg8bf5rzjndvf9hsw3c6mqwj8cp27mgn8ibxckrjd2"; depends=[Rcpp stringi]; }; tokenizers = derive2 { name="tokenizers"; version="0.2.1"; sha256="006xf1vdrmp9skhpss9ldhmk4cwqk512cjp1pxm2gxfybpf7qq98"; depends=[Rcpp SnowballC stringi]; }; tokenizers_bpe = derive2 { name="tokenizers.bpe"; version="0.1.0"; sha256="1pwgjrzdcsafpv9rlyly6fckcjiymz0xcjm9byavj069kc4c69mi"; depends=[Rcpp]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; tools4uplift = derive2 { name="tools4uplift"; version="0.1-1"; sha256="0difrjqgj8amc49mwh059ca9mr0z1fzy0g43vk43alsyl8lvajc4"; depends=[dplyr glmnet]; }; + topicdoc = derive2 { name="topicdoc"; version="0.1.0"; sha256="0qliy6y8l09nblch1swlywam2awzwjl5xx0w8c3kiz48jxfysw0j"; depends=[slam topicmodels]; }; topicmodels = derive2 { name="topicmodels"; version="0.2-8"; sha256="19msp5cz67ff4v1gfd8vhjnnsmwfkxiv08ym4k506j2mhaklipci"; depends=[modeltools slam tm]; }; topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; }; topoDistance = derive2 { name="topoDistance"; version="1.0.1"; sha256="055z3gvqlb8nyy58ix89w7miav9gj3h43a4wcfc3kagd97xc3222"; depends=[gdistance igraph plotly raster RColorBrewer scales sp]; }; @@ -14292,19 +14572,19 @@ in with self; { tosca = derive2 { name="tosca"; version="0.1-4"; sha256="1c7x89b2vh2xl5bc1xgclmnk2gajqalxmz4ipqlwp9axz91w85gs"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; totalcensus = derive2 { name="totalcensus"; version="0.6.2"; sha256="1z0awdzi93r4mmaymdahansss7ccb0y3ym1sqja0jr3dx71zy4jn"; depends=[data_table magrittr purrr stringr]; }; - touch = derive2 { name="touch"; version="0.1-4"; sha256="0xz3mvwhyn7wbqhbfp2klrnf89gvsncrv5y7fmk9ym3nkq7z26cg"; depends=[Rcpp]; }; + touch = derive2 { name="touch"; version="0.1-5"; sha256="0dan4mlvc5lg9v4zj9w6gk3c4cy64kaa984y495xpc1bzmv5c6jd"; depends=[Rcpp]; }; touchard = derive2 { name="touchard"; version="2.0.1"; sha256="06491r4x3ycmv3ddbqwig334wj9qvm395xlaifx4hjjyyi65xb3q"; depends=[MASS nleqslv numDeriv plotrix]; }; tourr = derive2 { name="tourr"; version="0.5.6"; sha256="028pbprq1hjfbzvybpdkwi49arsg9r7ayjb52flw33szfqdpcimw"; depends=[MASS]; }; - toxEval = derive2 { name="toxEval"; version="1.0.4"; sha256="1jz2d1wxw1jnyygsp34y3py8mwxjrnvj64smsifac32mvvi6ka5s"; depends=[dplyr DT ggplot2 leaflet magrittr RColorBrewer readxl shiny shinyAce shinycssloaders shinydashboard tidyr]; }; + toxEval = derive2 { name="toxEval"; version="1.1.0"; sha256="1zdgk91girmlxqq6zz3vzhj9m9q4r5ckn073cd7dpfdxl87444hh"; depends=[dplyr DT ggplot2 leaflet magrittr RColorBrewer readxl shiny shinyAce shinycssloaders shinydashboard tidyr]; }; toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; }; tpAUC = derive2 { name="tpAUC"; version="2.1.1"; sha256="0wix9qwcidj7xfqhh7bmrpnadd9qlkvg3515gaamdxkjbz2kyydc"; depends=[pROC]; }; tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; }; tpr = derive2 { name="tpr"; version="0.3-1.2"; sha256="0fnvzvis75gfkmxhyx6h3g4ps4rs07abk36r03108qwsmhcfk3y7"; depends=[lgtdl]; }; tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; }; - tracerer = derive2 { name="tracerer"; version="2.0.1"; sha256="0w8si9fgdh28swqba5jvb0zqgpkb33nq9vyq9rga83sfzn2wkik8"; depends=[jsonlite Rcpp testit]; }; + tracerer = derive2 { name="tracerer"; version="2.0.2"; sha256="0xh95qrd63s04zs69fcrmvwscn153qlpw2xlkzn8h6jwsd92amv9"; depends=[jsonlite Rcpp testit]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; - trackdem = derive2 { name="trackdem"; version="0.4.3"; sha256="04gjvm4dxdy7nwaq6f0nbvqb2hbvmava5x6q5kvyy7snsr8mx25f"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; + trackdem = derive2 { name="trackdem"; version="0.5"; sha256="12p6pg2gvqa55j9sxfvdjc3ah00w0av5cpmi400szkc2lr1gpb9s"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; trackdf = derive2 { name="trackdf"; version="0.2.1"; sha256="18kiwbrfalj19gjp2v3yhxlmc6liw5scfnwx2svq5f5h3h54a7iz"; depends=[data_table lubridate rgdal sp tibble]; }; trackeR = derive2 { name="trackeR"; version="1.5.2"; sha256="1f3giz6naxxyicgy9v0391ang43srwhy9zbiv4zmlc8i9v05b57i"; depends=[fda foreach ggmap ggplot2 ggridges gridExtra gtable jsonlite leaflet raster RSQLite scam sp xml2 zoo]; }; trackeRapp = derive2 { name="trackeRapp"; version="1.0"; sha256="05r012kcf86j45q00y6ynz9srd0by45w41bpx9mf7q4h8m5nm0jn"; depends=[changepoint colorspace DT foreach mapdeck mgcv plotly sf shiny shinydashboard shinyjs shinyWidgets trackeR V8 zoo]; }; @@ -14314,6 +14594,7 @@ in with self; { trade = derive2 { name="trade"; version="0.5.4"; sha256="05skmm2j826wjhmxdvkln50y0mjy74qcl2hay2l1322qqs7phin6"; depends=[antitrust]; }; tradestatistics = derive2 { name="tradestatistics"; version="0.2.5"; sha256="0y6xyba3lr7mdd8q4ar8x7v8shkknbd0qhkvnz2ad9kfbwbxv7v1"; depends=[crul dplyr jsonlite magrittr purrr rlang stringr]; }; trafo = derive2 { name="trafo"; version="1.0.1"; sha256="0gq3snjpkw0ncny7pkfi686qkgdhd8id73jxjk3chhqf5mzrrsbc"; depends=[FNN lmtest moments pryr]; }; + traineR = derive2 { name="traineR"; version="1.0.0"; sha256="0m0k9hxdpx8dzxdy8i0k2rqmibm78fkw8fykkm5r56g7zjh3b7g0"; depends=[ada dplyr dummies e1071 kknn neuralnet nnet randomForest rpart stringr xgboost]; }; traipse = derive2 { name="traipse"; version="0.1.0"; sha256="0174rxc3p3s848s9ynkkw32f33dq9gnq7zd14i3b9xnp8zr9jnph"; depends=[geodist geosphere magrittr]; }; traitdataform = derive2 { name="traitdataform"; version="0.5.6"; sha256="0wp3z9l9vpniaa2b53qq6a77ya0my9cvkqd8i831zsxyj63vaabl"; depends=[data_table getPass plyr RCurl reshape2 taxize units XML]; }; traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; }; @@ -14321,7 +14602,7 @@ in with self; { traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; trajectories = derive2 { name="trajectories"; version="0.2-1"; sha256="0sw1gcwmz2d27ck8gm5xa9bmmpgpy483brdyi74wccchwb3nfw2m"; depends=[lattice sp spacetime zoo]; }; trajr = derive2 { name="trajr"; version="1.3.0"; sha256="1p092kqvwg3ncbk9hh8dij2grl1hfs3j5j64cqn227nr5b3xn1rc"; depends=[plotrix signal]; }; - tram = derive2 { name="tram"; version="0.2-6"; sha256="1vlqc41g22lbsl9wa0zlfsb940frf3ddzyh2b6s5257nkpf17f9d"; depends=[basefun Formula mlt multcomp sandwich survival variables]; }; + tram = derive2 { name="tram"; version="0.3-1"; sha256="1qpnm498w5z9qhmhhh5dvm76hcdiv60s10njl8w9dhl0ljd21x68"; depends=[basefun Formula Matrix mlt multcomp sandwich survival variables]; }; tranSurv = derive2 { name="tranSurv"; version="1.2.0"; sha256="0r698s2yg7ypyzid52a46p0bhl3xi4rh50bfnx0pacc65rigjr6f"; depends=[SQUAREM survival]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; transformr = derive2 { name="transformr"; version="0.1.1"; sha256="186n789zzf2p9ggw9j7gmd4knfq051jhl35x1585jgll2karyn2c"; depends=[lpSolve Rcpp rlang sf tweenr]; }; @@ -14333,8 +14614,10 @@ in with self; { trawl = derive2 { name="trawl"; version="0.2.1"; sha256="1ns4nk8zdnl2z9clc2q38sbb1ijkj86lcifxq7d111mcwsmpb6fi"; depends=[DEoptim MASS rootSolve Runuran squash TSA]; }; tree = derive2 { name="tree"; version="1.0-40"; sha256="1rr6ws62j9h36f3nl713f8h3ndkh95mv46l055jvgmby5lw1dazz"; depends=[]; }; tree_bins = derive2 { name="tree.bins"; version="0.1.1"; sha256="1flrkhdqimsn8dxn97xzl1fykx916i1dis1bfany44yk0cjmd85g"; depends=[data_table dplyr rpart rpart_utils]; }; + tree_interpreter = derive2 { name="tree.interpreter"; version="0.1.0"; sha256="17yci49zsz05ydjzs0zbz8xg2vdjmh8xq6cfxchrq488kvjyjzsz"; depends=[Rcpp RcppArmadillo]; }; treeClust = derive2 { name="treeClust"; version="1.1-7"; sha256="1s7kh6q0bkixsygrip95zf1bi10ihddsa5lq9dfxd68yh8rsby6z"; depends=[cluster rpart]; }; treeDA = derive2 { name="treeDA"; version="0.0.4"; sha256="0zhzb21lvxk278ysl275g39y2r8dlgqdix5rfg2pwv3nzj2531rc"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; + treeHMM = derive2 { name="treeHMM"; version="0.1.0"; sha256="1iasvqfy62psj7md9sv97hqm1lcvkiw1qapsfsjcc6bdx5zflnxq"; depends=[future gtools Matrix matrixStats PRROC]; }; treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; treeclim = derive2 { name="treeclim"; version="2.0.3"; sha256="03d734zxz4vjrx7xw9r8y8lcsacn0p92q09n05vqfx4p7wvpwp26"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; @@ -14343,22 +14626,24 @@ in with self; { treeman = derive2 { name="treeman"; version="1.1.3"; sha256="0xvazizpi3dbdgjd48ff4kg4dhsi2yzbnkk43pgyi21zii673yyn"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; treemapify = derive2 { name="treemapify"; version="2.5.3"; sha256="1y6fyzxk542fp4h975xfgajz7cjym3rjs6asal9arv94a9cqra33"; depends=[ggfittext ggplot2]; }; + treenomial = derive2 { name="treenomial"; version="1.0.0"; sha256="1052f4k96p6849y9jsqjirqqbgg7kaabxh6f7fwflp7g8y6jkyd2"; depends=[ape Rcpp RcppArmadillo RcppThread]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; treeplyr = derive2 { name="treeplyr"; version="0.1.7"; sha256="11y15dslalwifarz79zyc5vxszyajkjyzm98p0w1n8gfr6lrq9yy"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; treespace = derive2 { name="treespace"; version="1.1.3.1"; sha256="0wnzc4fw23yi28a5hdl381kbkqxsqwyq3b3ljw1hfy89rpyy2v8c"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; treestartr = derive2 { name="treestartr"; version="0.1.0"; sha256="05rxy9lmb77ng4266871sd881mlp4rd5qalvsd7ps2x2j4plaqf4"; depends=[ape phytools]; }; treethresh = derive2 { name="treethresh"; version="0.1-11"; sha256="1fksyn9mycr6dpw1yh5b3fa7fk7ndz7q39174daplm55jbrz1dr5"; depends=[EbayesThresh wavethresh]; }; + trekcolors = derive2 { name="trekcolors"; version="0.1.1"; sha256="1fw2wgkkky79vy9sc3cn42vmfcdnsjsnhb81wvalwi6ww64fzrkh"; depends=[ggplot2]; }; trekfont = derive2 { name="trekfont"; version="0.9.3"; sha256="15p1r5q36fbajhwidjhhvvldckvz5js08w4cnj47gqr4lpmmpbx7"; depends=[]; }; trelliscopejs = derive2 { name="trelliscopejs"; version="0.1.18"; sha256="1i13l3a74cxppkffzbpnyh2faqdwj3gy55s4s0fck1fwpvlkn5zr"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; trend = derive2 { name="trend"; version="1.1.1"; sha256="1bd567n15k2vpmgbx02584k5kglrc58mlb5kgd07wdss3knpa48q"; depends=[extraDistr]; }; - trendchange = derive2 { name="trendchange"; version="0.1.0"; sha256="0j5rrahs0dsdnxs8g6qmkzvsahpfjhnf27a75k9kkxkhj0sj6xv4"; depends=[]; }; + trendchange = derive2 { name="trendchange"; version="1.1"; sha256="19r0kmwsim78ynssyh6j0zd99cz96cacy3hmyrjabwwvz0f8sk3h"; depends=[]; }; trendsegmentR = derive2 { name="trendsegmentR"; version="1.0.0"; sha256="0zgm5nbm5azmz6x0xg4aphc80q6x1cvijry9pznyi0mg14743g86"; depends=[]; }; trendyy = derive2 { name="trendyy"; version="0.1.1"; sha256="03n7qdfc197hds8bdwl20b0nn62nqnz9r35v1q315nm3ccdifl1p"; depends=[crayon dplyr gtrendsR magrittr purrr stringr tibble]; }; trialr = derive2 { name="trialr"; version="0.1.2"; sha256="1pwg6n11642a8zn7443a73w18yxrwqdniriaj7iq7ajnj31dbi70"; depends=[BH binom coda dplyr ggplot2 gtools magrittr MASS purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidybayes tidyr]; }; triangle = derive2 { name="triangle"; version="0.12"; sha256="1cv3l97myhkyl0c4xjympqghlk0av8xfk00av8kj93ndgkv5bfj7"; depends=[]; }; triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; }; - tribe = derive2 { name="tribe"; version="0.1.7"; sha256="1k12yzicf3p5wpgzpsv4kk5xzrdfx712z67kj9xmcr1mbs8l5skb"; depends=[bazar dplyr lazyeval magrittr rlist rstudioapi]; }; + tribe = derive2 { name="tribe"; version="0.1.8"; sha256="01z1b9k3j4xi5fp9pkpr991yr7x8vk8vysipy7iwdmdr7xg4w4p0"; depends=[dplyr lazyeval magrittr rlang rstudioapi]; }; tricolore = derive2 { name="tricolore"; version="1.2.1"; sha256="04ihsgy6l8nlfp1q8c14g56v2inpw48mlhni4xqfqb7mzvalvhf8"; depends=[assertthat ggplot2 ggtern shiny]; }; triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; trigpoints = derive2 { name="trigpoints"; version="1.0.0"; sha256="1hckjh2gb0fvd2c8x6mj0idpk3im7b831y7mbli1hqhry6qqdw15"; depends=[sf tibble]; }; @@ -14387,8 +14672,8 @@ in with self; { trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; }; trustOptim = derive2 { name="trustOptim"; version="0.8.6.2"; sha256="1nsl8jd6cna52b5dd92jw3sh84jqpg7gazskn7166bcjbph19bf7"; depends=[Matrix Rcpp RcppEigen]; }; trustedtimestamping = derive2 { name="trustedtimestamping"; version="0.2.6"; sha256="1rx7ypy331mq5ni5hxhqcfnicvwdgg9j2pm3aj097a5hhigibdrq"; depends=[digest httr jsonlite]; }; - tryCatchLog = derive2 { name="tryCatchLog"; version="1.1.4"; sha256="0iahbm1zjgrb5x5awlvy1jgylw47p7qa1cxhrzg2mjknwpsd4vwm"; depends=[]; }; - tsBSS = derive2 { name="tsBSS"; version="0.5.3"; sha256="1x56rm1nnkzfg482gahk4c7fvj5k1jhsqdfd7vcaac84h3a8xd9x"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; + tryCatchLog = derive2 { name="tryCatchLog"; version="1.1.6"; sha256="0ik2y2ac771z9r0wb4av2xhr3xv36n4wcv8cqx0vid3wcmbl6prc"; depends=[]; }; + tsBSS = derive2 { name="tsBSS"; version="0.5.5"; sha256="19i9raw3wiig66a84msqqwwxd9br4ayk108v7d9j78d0ynm6ki84"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; tsDyn = derive2 { name="tsDyn"; version="0.9-48.1"; sha256="0r8xxzr2z7r7xzpvi3sani169j3irw866gdmml0798czbdarq1qd"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.2"; sha256="0lw4s7gxn4xldsk5f3dz27bb9jywa14195703b5q1497h9j966gk"; depends=[KFAS]; }; @@ -14407,10 +14692,11 @@ in with self; { tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.6-0"; sha256="04clfkpkiy5p5nxcq59c7f4v1llj1d95lvck23h1px50lvb993fv"; depends=[cubature ks]; }; tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; }; tsfeatures = derive2 { name="tsfeatures"; version="1.0.1"; sha256="11ysmi9jd3x92fcylw6jbg62fdmdbi58nnasz0pm3ji46knwnd5n"; depends=[ForeCA forecast fracdiff furrr future purrr RcppRoll tibble tseries urca]; }; + tsfgrnn = derive2 { name="tsfgrnn"; version="0.1.0"; sha256="1kx4q1a12yrngg1jps4jk2k5svnmsl1lhybb6ziypza20hmmzral"; depends=[ggplot2]; }; tsfknn = derive2 { name="tsfknn"; version="0.3.0"; sha256="0h44s8bvnd68nhl0rbwvs0sycsjlmpnni0nr2169429a9y3f91f1"; depends=[ggplot2]; }; tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.4.2"; sha256="1yc9kcyj8yg7zsdkqsxkr7czv3i5gf2146z5h89qfqifrrzmjifa"; depends=[ggplot2 kernlab reshape2]; }; - tsibble = derive2 { name="tsibble"; version="0.8.4"; sha256="1qvjhnm7czg5fzpb360xq361sy372f7cnd6r7kqxs9a0dar19vhn"; depends=[anytime dplyr lifecycle lubridate purrr rlang tibble tidyselect vctrs]; }; + tsibble = derive2 { name="tsibble"; version="0.8.5"; sha256="1xm5zwx0p101gr4qf4yc1p33fhck44ppdk104pcwbhxwbza6mh3y"; depends=[anytime dplyr lifecycle lubridate purrr rlang tibble tidyselect vctrs]; }; tsibbledata = derive2 { name="tsibbledata"; version="0.1.0"; sha256="17qvjfkppg1z4pxgax37ikx2x28ib39syps5vhppc1y3yn8441vq"; depends=[tsibble]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; tsmp = derive2 { name="tsmp"; version="0.3.5"; sha256="1gilzxxgaa1qqsk56s7ynlqhz6bssxrpc1h7fxkjp0z9amajvb5h"; depends=[audio doSNOW foreach magrittr progress]; }; @@ -14428,7 +14714,7 @@ in with self; { ttScreening = derive2 { name="ttScreening"; version="1.6"; sha256="1i8c9l3sdkzl99zxxyfqm84vkh6wjdh3a32l5q8ikf74g9dhxkf4"; depends=[corpcor limma MASS matrixStats simsalapar sva]; }; ttTensor = derive2 { name="ttTensor"; version="0.99.2"; sha256="1qhpsaa0m8g61mhdffnrpfsc66iwm240na2wsa3cnmydk1mqjlxd"; depends=[Matrix PTAk rTensor tensorr]; }; ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; - ttdo = derive2 { name="ttdo"; version="0.0.3"; sha256="1zb09llgfwf039lzs27f3habzz0c8v3af5b8bxklvkp24mly0arg"; depends=[diffobj tinytest]; }; + ttdo = derive2 { name="ttdo"; version="0.0.4"; sha256="1hq1s2rsngx496mhrf9pnpvp25805f17pfj7l0dm5g7lmiq24rr8"; depends=[diffobj tinytest]; }; ttestshiny = derive2 { name="ttestshiny"; version="0.1.0"; sha256="186569p9h3597z9lxyzm7fj8k6bzgm2kw757dcv2qhhf2k7nfch9"; depends=[dplyr shiny shinyAce shinyjs]; }; tth = derive2 { name="tth"; version="4.3-2-1"; sha256="19rvmyprl1nk9mmngk6dax8rnli10msfvm3vzp86pbdjxnsh3hjc"; depends=[]; }; tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; @@ -14450,11 +14736,12 @@ in with self; { turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; }; tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; tuts = derive2 { name="tuts"; version="0.1.1"; sha256="0mwc6lsnhxww041wh3020wz7w812asp1d6djv4n9pl7jil0kvkry"; depends=[coda doParallel foreach lomb mcmcplots rjags truncnorm]; }; - tvR = derive2 { name="tvR"; version="0.3.0"; sha256="1pg13bvndqyyi2yl1bg3bkdh2xq060ihl25j3a91nahwasy3225m"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; + tvR = derive2 { name="tvR"; version="0.3.1"; sha256="056a241m3c1jhf8idly1bm4xja349cg5yzz19l45zyggml82snin"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; tvReg = derive2 { name="tvReg"; version="0.4.2"; sha256="1ma6jiqlj5jlsyk37vcddyv427xi8980cbplb40ppync18f7psmp"; depends=[bvarsv MASS Matrix systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; + tvgeom = derive2 { name="tvgeom"; version="1.0.0"; sha256="18vqkxqikj87nhcayp7f5amh1mzfpnv2lfb9wg900wi5xpzg4n1q"; depends=[knitr testthat]; }; tvm = derive2 { name="tvm"; version="0.4.0"; sha256="0v5b9s35q08a4z2ccph7g9q211w04x99sh72lrfby43fgl2jwyd1"; depends=[ggplot2 reshape2]; }; - tvthemes = derive2 { name="tvthemes"; version="1.0.0"; sha256="1817m5w6qcvsc0ci7nqfwcnn4xv36mlz8cx6f3mzh2ad9dkrc9y6"; depends=[extrafont ggplot2 glue magick scales]; }; + tvthemes = derive2 { name="tvthemes"; version="1.1.0"; sha256="0bc9li8vgmm4r6dshm52ll2d69gcynv1xrv8n7jhbyn7xmx3q3kz"; depends=[extrafont ggplot2 glue magick scales]; }; twang = derive2 { name="twang"; version="1.5"; sha256="1sp1vb6l0mwpy9b9my5d3spc0q0zs7xg4dkmi4cl7hy7m9xy1dbk"; depends=[gbm lattice latticeExtra survey xtable]; }; tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; }; tweenr = derive2 { name="tweenr"; version="1.0.1"; sha256="0sq90pbln6lkc2q3zflhkxxwpqdw5dd7igrxhdnlynkdrmi83mpg"; depends=[farver magrittr Rcpp rlang]; }; @@ -14469,26 +14756,27 @@ in with self; { twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; twoway = derive2 { name="twoway"; version="0.6.2"; sha256="0q053jvb2sa762bjnpzkxzdcq1wk82ynp4rjl4j6qncqccvqq0c3"; depends=[]; }; txtplot = derive2 { name="txtplot"; version="1.0-3"; sha256="1949ab1bzvysdb79g8x1gaknj0ih3d6g63pv9512h5m5l3a6c31h"; depends=[]; }; - txtq = derive2 { name="txtq"; version="0.1.6"; sha256="062ljbfix54dsfj4kjc7nmmvdhff5jigds60r1z860hf3bxwvlqi"; depends=[base64url filelock R6]; }; + txtq = derive2 { name="txtq"; version="0.2.0"; sha256="1w4dmws2l0r5bbx2n2g79dfrpa8dz4hlg8raphgh8mimf1skfb3h"; depends=[base64url filelock R6]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; uCAREChemSuiteCLI = derive2 { name="uCAREChemSuiteCLI"; version="0.2.0"; sha256="1nccgkxv57inhgvgmhwm4fr8cp28sj8n83za5gam9xx1f42mzsqk"; depends=[ChemmineR usethis]; }; uGMAR = derive2 { name="uGMAR"; version="3.2.0"; sha256="09x7wf5lgqrz5vpgbsl13c4p57amf3wp6yaib10zh1xnmw3fa2i6"; depends=[Brobdingnag pbapply]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; uavRmp = derive2 { name="uavRmp"; version="0.5.4"; sha256="0djx6z9489pr03bf01y2d79ar840q4ffj39j72c8phz27yz40y04"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; - ubci = derive2 { name="ubci"; version="0.0.5"; sha256="1470cvnniwa8pn4yvqg82d5b2zg8n1l4yjdbg0jmqyiw7bf41m0b"; depends=[dplyr httr lubridate magrittr tibble tidyr]; }; + ubiquity = derive2 { name="ubiquity"; version="1.0.0"; sha256="065jygsqsz2sczpri4xdw7gjjk1pp6z87nl3v5a6a6lsmkzkwlhz"; depends=[deSolve digest doParallel doRNG flextable foreach gdata ggplot2 gridExtra knitr MASS officer optimx PKNCA pso rhandsontable rmarkdown rstudioapi shiny]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; + uchardet = derive2 { name="uchardet"; version="1.0.1"; sha256="1h6vkf3kbh7bzb1vp5rdss1r52lgvd4m3c73r89ba3kpsnwyzcvq"; depends=[Rcpp]; }; uclust = derive2 { name="uclust"; version="0.1.0"; sha256="0b4cj1np4b7m3nfk3crisw9qznk86lbh7x9xb70lwjmcjjgxkw8q"; depends=[dendextend robcor]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; udapi = derive2 { name="udapi"; version="0.1.3"; sha256="0qyn6fdh8ia913hn2dl0x99xsm20ps8zm52snswlyb00prinm668"; depends=[curl httr]; }; udpipe = derive2 { name="udpipe"; version="0.8.3"; sha256="1ys4ss700h3xk4z72lsjavd6vic4ihm00b1mzidq41klrgpwzcb0"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; ufs = derive2 { name="ufs"; version="0.3.1"; sha256="079azpicvimjq7qw1790j5f0vq5jis67lv4r28x3390r9fh04m6l"; depends=[digest diptest dplyr GGally ggplot2 ggrepel ggridges gridExtra gtable knitr pander plyr scales SuppDists viridis]; }; - ui = derive2 { name="ui"; version="0.1.0"; sha256="1pc18v99n1psiiv7jxy3as1qwg2y41i1syrpvkbk05yii1qzsw2b"; depends=[Matrix maxLik mvtnorm numDeriv]; }; + ui = derive2 { name="ui"; version="0.1.1"; sha256="15hcdzaj75ip6j7yglx8rqhp4y3yf3aw5cpbjgk1mjr4cya7lvzi"; depends=[Matrix maxLik mvtnorm numDeriv]; }; uiucthemes = derive2 { name="uiucthemes"; version="0.3.0"; sha256="0bby3a1fdh3y7yia38qy2gjgcqxkkvp4k13b6iabj219yck9a4lq"; depends=[rmarkdown xaringan]; }; ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; }; ukbtools = derive2 { name="ukbtools"; version="0.11.3"; sha256="1j5p9ypn3s781582all64kvywih1ry0lqsh1zirr35g7r46fy783"; depends=[data_table doParallel dplyr foreach ggplot2 magrittr purrr readr scales stringr tibble tidyr XML]; }; - ukgasapi = derive2 { name="ukgasapi"; version="0.16"; sha256="0bj1dpsz4709dcb297b9rcb4nbzvxxhrqh5sv2qbrcypdh0x2m3b"; depends=[RCurl XML]; }; + ukgasapi = derive2 { name="ukgasapi"; version="0.17"; sha256="1jly1bzisvvx8pcsw0fb35xxvjgq7ydpxianf3dbxa88msdjr02d"; depends=[RCurl XML]; }; ukpolice = derive2 { name="ukpolice"; version="0.1.2"; sha256="0jwc57360cr9fkqzs5j2jmnfagci86jzi6p5d5mpm35drsrzm1ca"; depends=[jsonlite purrr tibble]; }; ulid = derive2 { name="ulid"; version="0.3.0"; sha256="0xxkqrnlz3pkb3s1gacfzqav54w97gc0w8rh0fn1qy5rkmg2bplv"; depends=[Rcpp]; }; umap = derive2 { name="umap"; version="0.2.3.1"; sha256="0rzz1s029cn1w1bf5va2pav2lg9j1mq97ibwcln39drvm67kj76d"; depends=[openssl Rcpp reticulate RSpectra]; }; @@ -14497,14 +14785,15 @@ in with self; { unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncertainty = derive2 { name="uncertainty"; version="0.2.0"; sha256="1mq14ny7l3gy3wjsqijnm37azavyapxszjnckd861h4hgcpdcdjz"; depends=[mvtnorm triangle]; }; - uncmbb = derive2 { name="uncmbb"; version="0.2.0"; sha256="0cvbh7a81g52hd2qzp23jwwjd5406iszf4wilgrz8sjfrfgybgfm"; depends=[dplyr rlang]; }; + uncmbb = derive2 { name="uncmbb"; version="0.2.1"; sha256="0ilbsl6hww613i6in9x4v8knx9vlv6hiycgl2879aiq456ghx91m"; depends=[dplyr rlang]; }; understandBPMN = derive2 { name="understandBPMN"; version="1.1.1"; sha256="04wnyxplrn5c6jb76dw25pawwcvvn5xq80lqn5imsf31nbwybpm5"; depends=[devtools dplyr purrr R_utils Rcpp tibble tidyr usethis XML]; }; unfoldr = derive2 { name="unfoldr"; version="0.7"; sha256="18qjsmlbqy9nhwyv288r9n3plv22fgb4g73jpyjyzy3hzfamcb17"; depends=[]; }; + unglue = derive2 { name="unglue"; version="0.0.1"; sha256="0avk5d4dgbmqvmqlr5kbhg3qsyg5rxmw9icadivaahzf4znav5x4"; depends=[]; }; ungroup = derive2 { name="ungroup"; version="1.1.1"; sha256="0jrxxp93ak9bva98j3nmkhrb7znz7lpywk56415k4b2rzpy3j7fs"; depends=[MortalitySmooth pbapply Rcpp RcppEigen Rdpack rgl]; }; uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; uniah = derive2 { name="uniah"; version="1.0"; sha256="19zwy33gwa749i81mi9h05k8k3l4xbbln3k6q70fa7ic5lqbbdzj"; depends=[ahaz Iso survival]; }; - unifDAG = derive2 { name="unifDAG"; version="1.0.2"; sha256="0az9knspvf49mvp41m64lpm1a0nzvkygg957pb81mm9kh6cjbhfs"; depends=[gmp graph]; }; - unifed = derive2 { name="unifed"; version="1.1.1"; sha256="0bh15cvpasgd0ypcmybbss5s9hsilfxgqj4b0mppj44vxm15bzk6"; depends=[]; }; + unifDAG = derive2 { name="unifDAG"; version="1.0.3"; sha256="052qjrnj04imhj6i62k8jdx9rs8r70n0qrmd2z45x4fimn5py6j5"; depends=[gmp graph]; }; + unifed = derive2 { name="unifed"; version="1.1.2"; sha256="04598l4ngf0v9j49m9gzxls7z2aal76pddprliqh1qbb694yq44r"; depends=[]; }; uniformly = derive2 { name="uniformly"; version="0.1.0"; sha256="0n3s0x05v4d79jn51nwj06gm074rgy269f57y2q5z0bkwyp6yc7n"; depends=[pgnorm]; }; uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; }; unikn = derive2 { name="unikn"; version="0.2.0"; sha256="1lw3wn93bb8y76phnqwhvgn14zrs68rq8xx9hl2wbngispvwpwn1"; depends=[ggplot2]; }; @@ -14512,20 +14801,20 @@ in with self; { uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; unitedR = derive2 { name="unitedR"; version="0.3.1"; sha256="06plbhjbn1gflpxarn21knhiwfr02vxprak9qcghl30fkkymd02r"; depends=[plyr]; }; unitizer = derive2 { name="unitizer"; version="1.4.8"; sha256="1q2l32lkxv87vaih5wqfn6n2a2q6mlaw83mgrn4g5ircp5z3r98j"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.6-4"; sha256="1jz0mzd78sdfxkhqw041ji50hmhjk2ha55i31yjvz35nsw30lwi5"; depends=[Rcpp]; }; - unittest = derive2 { name="unittest"; version="1.3-0"; sha256="0haf3s3pc5bhsm6y5njghr9w8ifsjxczm5r7g0ynylwzvd019n8b"; depends=[]; }; + units = derive2 { name="units"; version="0.6-5"; sha256="02nls8m0r1r7kljs4x35naz3szq62hyqyd5vracf1xwi1kz5kdsh"; depends=[Rcpp]; }; + unittest = derive2 { name="unittest"; version="1.4-0"; sha256="1wyiikccnkw8fzrjrb2a80lw2xyiii4zb0hrbzfszy2bd6prqxx4"; depends=[]; }; univOutl = derive2 { name="univOutl"; version="0.1-5"; sha256="193wrpkvgmlrx43nag8w3ivrlqm37nm6g86wcvd3bgw3hchs70gi"; depends=[Hmisc robustbase]; }; unival = derive2 { name="unival"; version="1.0.2"; sha256="1sw0z7dmicmka3znrc1c5v0s9g8cpqapacdjzl5i4k5ak2qq35qp"; depends=[optimbase psych]; }; unix = derive2 { name="unix"; version="1.5"; sha256="0sgm1gzfkfilrsgmv567ld79azmfk076xl998sv139kh9dvwgsyx"; depends=[]; }; unjoin = derive2 { name="unjoin"; version="0.0.3"; sha256="08vjgl4dnh9kycrvdq5ngf57fy61n0nc582bi4znv06pq696rkwp"; depends=[dplyr rlang tibble]; }; - unmarked = derive2 { name="unmarked"; version="0.12-3"; sha256="0cbi3saga4g39x68xxhvk07wd0qwjx9jih3g5lhz0zidz4fp3g40"; depends=[lattice Matrix plyr raster Rcpp RcppArmadillo reshape2]; }; + unmarked = derive2 { name="unmarked"; version="0.13-0"; sha256="02i6iz4fqzb2frpscgq2kb7ywk2kpwsa3k9lx4c06p4x5zfhqfyj"; depends=[lattice MASS Matrix plyr raster Rcpp RcppArmadillo reshape2]; }; unpivotr = derive2 { name="unpivotr"; version="0.5.1"; sha256="0j2q98xm3gg3mscn9ckl4pcihwc4p5gn4sk5sr1nqi4ghc047qaf"; depends=[cellranger dplyr forcats magrittr pillar purrr rlang tibble tidyr tidyselect xml2]; }; unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; unrtf = derive2 { name="unrtf"; version="1.3"; sha256="06v6hjpbybv07vqfq23i2s6j0ic035vnm0i4wfqgiw0pw6c85242"; depends=[sys]; }; unsystation = derive2 { name="unsystation"; version="0.2.0"; sha256="02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-4"; sha256="1i7m4vfslsix98dwx4jlrsldm7fhhfp25gr7aapcxqxms7ryaby6"; depends=[Brobdingnag partitions polynom]; }; unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; - updog = derive2 { name="updog"; version="1.1.1"; sha256="0gsklxccvp887mr8rmn0vsmv6746fldbr66s900xa7l4lprn84hm"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo stringr]; }; + updog = derive2 { name="updog"; version="1.1.3"; sha256="0dnvf205x39sb236652rsa2c9wlb8a6c93i8ldr2f9mhrhwndzbp"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo stringr]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; uplifteval = derive2 { name="uplifteval"; version="0.1.0"; sha256="1gnn40c47rpx40j210bz6fb48d70p6spv3drr8hd5b3vzfz6686c"; depends=[dplyr ggplot2 gridExtra whisker]; }; upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; @@ -14540,21 +14829,23 @@ in with self; { uroot = derive2 { name="uroot"; version="2.1-0"; sha256="1hhq7ns2pyiziwx6sx7sb6445p3nynv7l04rksjngai2vpdaj0iw"; depends=[]; }; usdarnass = derive2 { name="usdarnass"; version="0.1.0"; sha256="10fh9anpmbb7i70q3hjxbplrkqa1q86zgh8nldsf2i526p62hpm1"; depends=[httr jsonlite readr]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; - usedist = derive2 { name="usedist"; version="0.1.0"; sha256="17mldp0888ig2xc8cp1nhldj5g3srwmbx3mfcnzz21n1fz31jkmg"; depends=[]; }; + usedist = derive2 { name="usedist"; version="0.3.0"; sha256="11bklq2fzmk49rnmlrpjlf9qn4lzdzx52722wy0mfd3qsg9mpcbm"; depends=[]; }; useful = derive2 { name="useful"; version="1.2.6"; sha256="0n50v1q75k518sq23id14jphwla35q4sasahrnrnllwrachl67v1"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; + usefun = derive2 { name="usefun"; version="0.4.1"; sha256="1fv10s73hk0xnwrigri9713bxa03jhrf8lafc110syihdj7d5kvx"; depends=[]; }; userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.2"; sha256="17arxxha8qr876nrf9szpymgamxlvacj3lfbmpiv973kyi3hr7m4"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists ufs viridis XML xtable]; }; usethis = derive2 { name="usethis"; version="1.5.1"; sha256="07an5wbikilg7cb3q6x5aykw8dfqnjrc3wpfb7gjmy0d9fh20fcy"; depends=[clipr clisymbols crayon curl desc fs gh git2r glue purrr rlang rprojroot rstudioapi whisker withr yaml]; }; usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; + ushr = derive2 { name="ushr"; version="0.1.0"; sha256="1m25pi96hkv4v2933clgzyknp36mvn9hsay8k4phqar4xxarrm11"; depends=[dplyr ggplot2 tidyr]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; usl = derive2 { name="usl"; version="1.8.0"; sha256="04w7p9i08a51smgg11kh4hablic5rjmr5hndrnlg49j5h20i7w1v"; depends=[nlsr]; }; usmap = derive2 { name="usmap"; version="0.5.0"; sha256="0fjmmw8xhba31gv8mx9k55881yb94z518csbqas3bvssq5s7048f"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; utc = derive2 { name="utc"; version="0.1.5"; sha256="1lhm5rhr78cxp3cz5n6j2zkhjphj7csk026xvvhkjqdi39rrq6i4"; depends=[]; }; utf8 = derive2 { name="utf8"; version="1.1.4"; sha256="0m0ywg8k3blfiahxvh1i4zn9dksrlc937d2lbza5fc38zjnrrnpn"; depends=[]; }; - utile_tables = derive2 { name="utile.tables"; version="0.1.6"; sha256="0azsqsz3rl8nwqj8c7chhipl739wfyf0anvfw29lnw8iwvik6a7y"; depends=[dplyr purrr rlang survival tibble utile_tools]; }; - utile_tools = derive2 { name="utile.tools"; version="0.2.1"; sha256="1advgh7xymviqj9qr84i9ykgwpb0ihj40q42z4i2xghgnnfwyqfy"; depends=[dplyr lubridate purrr rlang stringr tibble]; }; - utile_visuals = derive2 { name="utile.visuals"; version="0.2.1"; sha256="107gmlispmvafb2yvv8j869xpbcgyy6by6lj7910j5ll8pn74k55"; depends=[dplyr ggplot2 gridExtra purrr utile_tools]; }; - utility = derive2 { name="utility"; version="1.4.3"; sha256="12g2y9xzzi2sl3ya3va1p7nc7hrjhr4arsz06f8xlxw5n8kvdxag"; depends=[]; }; + utile_tables = derive2 { name="utile.tables"; version="0.1.8"; sha256="0zxy5y8d34lssg5jr7hzqkwf92k3yy52p1qjd505zrp90sgz9cjj"; depends=[dplyr purrr rlang survival tibble utile_tools]; }; + utile_tools = derive2 { name="utile.tools"; version="0.2.3"; sha256="0jlyrd7a96gpvs6i62smg4mcds9660y65lykqjs0dvm42c1j0823"; depends=[dplyr lubridate purrr rlang stringr tibble]; }; + utile_visuals = derive2 { name="utile.visuals"; version="0.2.3"; sha256="1748nbj2vzigw0q97z9c6pgxa9x8h9rllh8asaahdybachwal7kh"; depends=[dplyr ggplot2 gridExtra purrr utile_tools]; }; + utility = derive2 { name="utility"; version="1.4.4"; sha256="18ariimhlmh4gi01jdywidk3gwfcm2yhl4d0dbr8ymdxlg1f1w8g"; depends=[]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.6"; sha256="07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7"; depends=[data_table dplyr RCurl stringdist stringr]; }; utiml = derive2 { name="utiml"; version="0.1.5"; sha256="02wxsg1gg2y83cii5ly7r8lk376kas261f9qyl03z55p5m72w9zy"; depends=[mldr ROCR]; }; uuid = derive2 { name="uuid"; version="0.1-2"; sha256="1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx"; depends=[]; }; @@ -14576,7 +14867,7 @@ in with self; { valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.5.0"; sha256="14jhrwkiwmha3vlmm7b50n2xxyizj6ddmy89gb20mpzq7qhz1ika"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; - valueEQ5D = derive2 { name="valueEQ5D"; version="0.4.4"; sha256="05949qd1ydiz86kp4vanv8g6z0mry9iyjr7ja2ni919sz91bw0zs"; depends=[dplyr rstudioapi stringr testthat]; }; + valueEQ5D = derive2 { name="valueEQ5D"; version="0.5.0"; sha256="0835p71lipihxks8mzb4wisrjlnlqb794khzw0bh6f6j5s3kaspb"; depends=[rstudioapi testthat]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; vamc = derive2 { name="vamc"; version="0.1.0"; sha256="1rcyj2zsx33rxmhw7p1i45cm6z6380df0bayxlyizi7vh43ggy6p"; depends=[Rdpack]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.1.1"; sha256="094kd72slq0n3pk0p6zps241aszb9yql49h4mr007zf0kn8wlf8v"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; @@ -14592,7 +14883,7 @@ in with self; { varclust = derive2 { name="varclust"; version="0.9.4"; sha256="0knmfq3pn38j8p29j6sqapdv3g5335si3gwiw932ml5z49a8ga5m"; depends=[doParallel doRNG foreach pesel RcppEigen]; }; vardiag = derive2 { name="vardiag"; version="0.2-1"; sha256="07i0wv84sw035bpjil3cfw69fdgbcf2j8wq4k22narkrz83iyi2z"; depends=[]; }; vardpoor = derive2 { name="vardpoor"; version="0.16.0"; sha256="09dy1q1lx3b53an7qdszqzl5r4aswddy3046cvz997k1f692mwda"; depends=[data_table foreach ggplot2 laeken MASS plyr pracma stringr surveyplanning]; }; - varhandle = derive2 { name="varhandle"; version="2.0.3"; sha256="11yisjgqc8fq0sj1kzgp51i926cs4yqkpfmbis5ak786wqalc6na"; depends=[]; }; + varhandle = derive2 { name="varhandle"; version="2.0.4"; sha256="17hvn991268xdfmxx9a03k04zy9gbd4jihyl0750pm3flsldarrl"; depends=[]; }; variables = derive2 { name="variables"; version="1.0-2"; sha256="02q1fyd7r0xclvwbiqz07dr6y5g2sqfjj1qv5hvvhs0vmx93w7f9"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; variantspark = derive2 { name="variantspark"; version="0.1.1"; sha256="13hkp6l64hi7xlll09gin7kdlkqrkn0lggrw8147zy9ivhknhk59"; depends=[sparklyr]; }; @@ -14601,6 +14892,7 @@ in with self; { varrank = derive2 { name="varrank"; version="0.2"; sha256="19c40wwiadyqwn4z7nd22ynpa4wxr2anr2487mllmpg1d7wz3y38"; depends=[FNN]; }; vars = derive2 { name="vars"; version="1.5-3"; sha256="0zc6v827ll19n088n31afgjf65zqwvyzmmj4q3ab1xhqzxfsgbw6"; depends=[lmtest MASS sandwich strucchange urca]; }; varsExplore = derive2 { name="varsExplore"; version="0.1.0"; sha256="1sscz565i288nmk7sv03kj2xysfppvil4nl2lxxbvp3y4mrkz09b"; depends=[dplyr DT glue magrittr purrr rio rstudioapi stringr tidyr]; }; + varycoef = derive2 { name="varycoef"; version="0.2.9"; sha256="1hc6w5bmmp98bnly7wyb10ljdsfl40xy2i60lmrask93zk80br7f"; depends=[fields RandomFields sp spam]; }; vaultr = derive2 { name="vaultr"; version="1.0.2"; sha256="1b7g0jplp5dw1img7d6wm75gaycb3z8a8mzc6s0iwvhbfl8vf574"; depends=[getPass httr jsonlite R6]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; @@ -14623,16 +14915,14 @@ in with self; { vegan3d = derive2 { name="vegan3d"; version="1.1-2"; sha256="01yyhrapdvs6rr5hw1ij4jnpz7mq005s35pn96snpy8ngn6ir386"; depends=[cluster rgl scatterplot3d vegan]; }; vegawidget = derive2 { name="vegawidget"; version="0.2.1"; sha256="1afmz3bpd863hghvfbv3yicy9hf29fr9ga741yxbkx5jd8grxzzs"; depends=[assertthat glue htmltools htmlwidgets jsonlite magrittr rlang]; }; vegclust = derive2 { name="vegclust"; version="1.7.7"; sha256="0f81jw429ib601lvbzi4q23kb5n6lvavlgw56wfqdmvvkl68vwlc"; depends=[circular Kendall MASS Rcpp sp vegan]; }; - vegdata = derive2 { name="vegdata"; version="0.9.5"; sha256="145frmlsdb7m5z8qa03js4061pqmgvy3gykxkpiv1wv2wnfzyvnr"; depends=[foreign XML]; }; + vegdata = derive2 { name="vegdata"; version="0.9.7"; sha256="1cfb993p8sgm08g5859v4q9mil3a64yzhx3hzddvp536pq7jsc86"; depends=[foreign plyr xml2]; }; vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; vegperiod = derive2 { name="vegperiod"; version="0.2.6"; sha256="0v8bpxaa0xp8ywnycxs3613scncrhv8g7p99j6n5hs26m4h1km49"; depends=[]; }; - vegtable = derive2 { name="vegtable"; version="0.1.4"; sha256="1gk80i4gi98nigiya4n8ng8d2y7l3j63i1ijg4g80nfr5w64qh5w"; depends=[foreign plotKML qdapRegex sp stringi taxlist vegdata]; }; vein = derive2 { name="vein"; version="0.8.0"; sha256="1yaz7vxcb6sspalsdzjjb0i08w0s2f0p3ms0gli1v8z4qfgg5izz"; depends=[data_table eixport sf sp units]; }; velociraptr = derive2 { name="velociraptr"; version="1.1.0"; sha256="0a67vmv05cxc9f27aqzr6nkgy2mj3fhykwj5nb23qwfqa669a5hi"; depends=[sf]; }; velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; }; vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; }; venn = derive2 { name="venn"; version="1.7"; sha256="0lll5bcwx64di4m0k56f00vsfaas2l2mkcbblniq302v0g12v8cj"; depends=[]; }; - vennLasso = derive2 { name="vennLasso"; version="0.1.5"; sha256="05msl15kgscj8dhnvb9ngkqldasgvw4jrfmkbfrfajbw1w3qbqm3"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; vennplot = derive2 { name="vennplot"; version="1.0"; sha256="0x59awa1zsjwk5qb1jzv6d2mn2fm4aq1lq8zlbnf1da0h4837yab"; depends=[Rcpp rgl stringr]; }; verification = derive2 { name="verification"; version="1.42"; sha256="0pdqvg7cm9gam49lhc2xy42w788hh2zd06apydc95q2gj95xnaiw"; depends=[boot CircStats dtw fields MASS]; }; @@ -14643,16 +14933,17 @@ in with self; { vetr = derive2 { name="vetr"; version="0.2.7"; sha256="1gwaa5wz675g6hgifwvskix929ar1jk2h0gpfyhxifzdb6dp2mw4"; depends=[]; }; vfcp = derive2 { name="vfcp"; version="1.4.0"; sha256="0zj1ihqdx5x1695al1xyi8k001yw8x7gdss72myxlnh7b4flnp9m"; depends=[copula extraDistr stringr]; }; vfprogression = derive2 { name="vfprogression"; version="0.7.1"; sha256="0kgw1jx0rl9v8qy8qg7zjzdgvwqdi7k1lsvsx3lnpw4sfpkzsq23"; depends=[]; }; + vhcub = derive2 { name="vhcub"; version="1.0.0"; sha256="04a8hdm4pxl8fzwy9q2wqc9q0dl5r49xwbid70yj9qlflh683id0"; depends=[Biostrings coRdon ggplot2 seqinr stringr]; }; vhica = derive2 { name="vhica"; version="0.2.4"; sha256="0km49lrzn9rm3wxadwxc290dvx3bsblbmna7f9lnkq6g1z5jdqwg"; depends=[]; }; viafr = derive2 { name="viafr"; version="0.1.0"; sha256="14y5k1vskfzxfpzjkk9602p8mvvyfrf3qpr517zdb714wv3gwk3h"; depends=[assertthat crul dplyr jsonlite magrittr purrr rlang stringr tibble tidyr utf8]; }; vici = derive2 { name="vici"; version="0.5.2"; sha256="0qad8ab04ndd29kcmd388piiymablfc7xlv6iml4sxkid7z5kgby"; depends=[cowplot DT ggplot2 ggpubr nlme shiny tidyr]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; viewshed3d = derive2 { name="viewshed3d"; version="2.0.0"; sha256="0wil1k64clfzjl2j5gl4xi4m4q0l15frxsphvsajp5hqgfpk6fn0"; depends=[data_table doParallel foreach iterators rgl tcltk2 viridis VoxR]; }; vimp = derive2 { name="vimp"; version="1.1.6"; sha256="1jczlg8sa62f9skn32gbc094lbm41w5hp65w1k1imqxcvb43n8ql"; depends=[SuperLearner]; }; - vinereg = derive2 { name="vinereg"; version="0.5.0"; sha256="17qni21jaizmfzl975xd39ahlc5flfnmy6xy7n9adfv346f3zwp0"; depends=[cctools furrr future kde1d rvinecopulib]; }; + vinereg = derive2 { name="vinereg"; version="0.7.0"; sha256="1fviqzs879n7rin3b0jks8dfvcxiay8jssqy7salslghpj7rkm84"; depends=[assertthat BH kde1d Rcpp RcppEigen RcppThread rvinecopulib wdm]; }; vines = derive2 { name="vines"; version="1.1.5"; sha256="057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1"; depends=[ADGofTest copula cubature TSP]; }; violinmplot = derive2 { name="violinmplot"; version="0.2.1"; sha256="1j3hb03y988xa704kp25v1z1pmpxw5k1502zfqjaf8cy4lr3kzsc"; depends=[lattice]; }; - vioplot = derive2 { name="vioplot"; version="0.3.2"; sha256="13kfjp747bnzksai8j39y2hyl3ljc6n53c2cfhaw78q3d63x0lbv"; depends=[sm zoo]; }; + vioplot = derive2 { name="vioplot"; version="0.3.4"; sha256="1fsklymilspzz5fzlj7666x09aglaw0v4x0yfjjzy4vr5qpjc529"; depends=[sm zoo]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; vip = derive2 { name="vip"; version="0.1.3"; sha256="140sv4rp7g600adh0mq8k8m8v6qdb6rkan87fh6i0svw67vbjr16"; depends=[ggplot2 gridExtra magrittr ModelMetrics pdp plyr tibble]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; @@ -14667,7 +14958,7 @@ in with self; { visTree = derive2 { name="visTree"; version="0.8.1"; sha256="1l07zfr2hagjpdxfw5290wa3ki4bl7iqxrrhda0d1bp3wmwfz0ai"; depends=[colorspace partykit rpart]; }; visdat = derive2 { name="visdat"; version="0.5.3"; sha256="1ikqp29nncbw1xlwyb9dqqgcdk9q0bs3wxhnhnjpb11vcjv7cz2j"; depends=[dplyr ggplot2 glue magrittr purrr readr tibble tidyr]; }; visit = derive2 { name="visit"; version="2.1"; sha256="0kkspih7m18g5pqlwrxpgjdwqxpp23c3xyvcnvv247abl9aq81rd"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders]; }; - visreg = derive2 { name="visreg"; version="2.5-1"; sha256="106i8y16iam1kbfqd56447vfhk5mixkm92gpqcl8rf6ycd6vi5y5"; depends=[lattice]; }; + visreg = derive2 { name="visreg"; version="2.6-0"; sha256="0an58wrgn8qxmigc3nvykvglh41asdz8bn4zrzpg34dxiqykqb4b"; depends=[lattice]; }; vistime = derive2 { name="vistime"; version="0.8.1"; sha256="0nm7sdbj99nlb46rfs5w2k62v1iikfymmz934rb21rn7cj8hs99p"; depends=[plotly RColorBrewer]; }; vistributions = derive2 { name="vistributions"; version="0.1.1"; sha256="1s68dpcy55v6yw7ivh2xpshz6qc0qaifjd15h7rjg3zl1cx81mh3"; depends=[ggplot2 magrittr shiny]; }; visualFields = derive2 { name="visualFields"; version="0.6"; sha256="1w6wkyzjakj6ss9nv4gzkgva4m21jbsz10c2jy660bjb25rf59ih"; depends=[deldir flip gtools Hmisc matrixStats spatstat]; }; @@ -14687,7 +14978,7 @@ in with self; { voronoiTreemap = derive2 { name="voronoiTreemap"; version="0.2.0"; sha256="1wvnqdrvba4ss4f3k8gzb720irdq2brv2aaq16ywifv8fnjf02r3"; depends=[data_tree DT htmlwidgets rlang shiny shinyjs]; }; vortexR = derive2 { name="vortexR"; version="1.1.6"; sha256="113ndhf2f3hlhmgbg6gh5fq1az6d314fwl872dwypj2zsvfm7x03"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; }; vortexRdata = derive2 { name="vortexRdata"; version="1.0.5"; sha256="0b47q3aslz4110a1bfaa103i098y2ngzrjh01rwasq3gd6xbif9n"; depends=[]; }; - vosonSML = derive2 { name="vosonSML"; version="0.27.2"; sha256="0a2qqs6kf48l5ik3dsw40xsw1wzq7bnc3vdh33jiqh2fm93nzvrp"; depends=[data_table dplyr Hmisc httpuv httr igraph magrittr RCurl RedditExtractoR rlang rtweet stringr textutils tictoc tm]; }; + vosonSML = derive2 { name="vosonSML"; version="0.29.4"; sha256="0ngipwg83xw832ikaaqbyh2zxkwwwxalp6xrb60dk96z2r7qgj2r"; depends=[data_table dplyr Hmisc httpuv httr igraph magrittr purrr RCurl RedditExtractoR rlang rtweet stringr textutils tibble tictoc tm]; }; vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.3.1"; sha256="12xv0c3g4vr23c8adkk8z7m7sx31w5mjvdg9h4qbvaimb99p2r7z"; depends=[dplyr ggplot2 jsonlite scales]; }; votesys = derive2 { name="votesys"; version="0.1.1"; sha256="1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920"; depends=[data_table gtools Matrix]; }; @@ -14706,7 +14997,7 @@ in with self; { vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; vtable = derive2 { name="vtable"; version="0.5.0"; sha256="02dagwaakf08v9y2lm5j2r5bfz8sg6ac0hv6akmjp0llq2bd725d"; depends=[sjlabelled]; }; vtreat = derive2 { name="vtreat"; version="1.4.7"; sha256="1x2z1sc45jnbnj3p2nfb7v1r2f4lca86ky0znl5hlvk174d2nxyf"; depends=[wrapr]; }; - vtree = derive2 { name="vtree"; version="2.0.0"; sha256="1zxsvzbyq6nkghg9dx1zxs2mnxzwv54nv317fh3vq45c6wdj43cn"; depends=[DiagrammeR DiagrammeRsvg rsvg]; }; + vtree = derive2 { name="vtree"; version="3.0.0"; sha256="0la03f34pnrghsaszp97xl0bri71v23cqylsaqz077077aryj1m2"; depends=[DiagrammeR DiagrammeRsvg rsvg]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwline = derive2 { name="vwline"; version="0.2-2"; sha256="1hilr996xn5wh8kfyab55w2i1c02a8x909h4ahag5q6s7603qng5"; depends=[gridBezier polyclip]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; @@ -14721,18 +15012,18 @@ in with self; { waffect = derive2 { name="waffect"; version="1.2"; sha256="0r5dvm0ggyxyv81hxdr1an658wkqkhqq2xaqzqpnh4sh4wbak35a"; depends=[Rcpp]; }; waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; - waiter = derive2 { name="waiter"; version="0.0.1"; sha256="1zl95v01qbnrs7nh2rcmhjny57wvfylzrdm7gpyyxj753mzwla6b"; depends=[shiny]; }; + waiter = derive2 { name="waiter"; version="0.0.6"; sha256="1hxp525zk422cw88cnap5kc773qff9gc840jqa0k88hh34yhyybb"; depends=[magrittr R6 shiny]; }; wakefield = derive2 { name="wakefield"; version="0.3.3"; sha256="05z9a6g1cdavalp50wss7klnlcdbv3y1jvz1v8ry1x2bziy216y2"; depends=[chron dplyr ggplot2 stringi]; }; walkalytics = derive2 { name="walkalytics"; version="0.1.0"; sha256="1kl6kwwnl67d45akna01xp389wjxsxlc84l0bcpadbipsqyb3kd1"; depends=[base64enc dplyr httr purrr sp stringr tibble]; }; walker = derive2 { name="walker"; version="0.3.0"; sha256="0p45mq6xfpzr82y8pbfv04r85prvygm6z01xda4paicmimynd2r4"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; walkr = derive2 { name="walkr"; version="0.4.0"; sha256="1lra3ard90nzlpwwfiq50ghd3qv5xnmsp8rjhlq9rkpa7xazsnx8"; depends=[hitandrun limSolve MASS Rcpp RcppEigen shinystan]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; wallace = derive2 { name="wallace"; version="1.0.6"; sha256="0pnkwdfmimnvyygbz1iz1b9fhcdi7k53wjw44kmnr2b7ln9pbcl2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin XML zip]; }; - wally = derive2 { name="wally"; version="1.0.9"; sha256="1g6dywny8s8fpdnfvrlbzsp9d9dhxdxrm1j4dd3b9r6rpiajf964"; depends=[data_table prodlim riskRegression]; }; + wally = derive2 { name="wally"; version="1.0.10"; sha256="1d03vxn6q7v0nsrkd7dxkkv3siysgicv6c13fkvwmypln9vsl6sl"; depends=[data_table prodlim riskRegression]; }; walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.3"; sha256="1nk2glcvy4hyksl5ipq2mz8jy4fss90hx6cq98m3w96kzjni6jjj"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.5.0"; sha256="0y9xmh9a93lnadg83i223j2nf77jazz8m1ck1bmdf5jwj4vyzaqa"; depends=[]; }; - warbleR = derive2 { name="warbleR"; version="1.1.17"; sha256="0chpq5sr1qzv5ymcqg98k2g8rkmwpazjmxi50q0jvlkqijvr1m5j"; depends=[bitops dtw fftw iterators jpeg maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc soundgen tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.18"; sha256="10kwr7x4m210hmhjn15rxg72mm24imibswqasdx7pkxpfbavccq1"; depends=[dtw fftw maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc tuneR]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; }; washeR = derive2 { name="washeR"; version="0.1.2"; sha256="0sb5sgwf7y9sd291qfj1az3x6h6gmznnnsdmqizkmv2xz9029rxz"; depends=[gplots]; }; @@ -14773,7 +15064,7 @@ in with self; { webr = derive2 { name="webr"; version="0.1.0"; sha256="0fjbk933034cgmqd41cw7q5xcvrwgylcic6lxav9jv3b2sspzw06"; depends=[ggplot2 moonBook stringr]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; websearchr = derive2 { name="websearchr"; version="0.0.3"; sha256="1c6dwm5g5rjq0b12zrwwi5k9760jb0ph83v4j2gm8zm0x9dhiqm9"; depends=[]; }; - webshot = derive2 { name="webshot"; version="0.5.1"; sha256="08sb1xi376pfy1vwilk2d68zljsg9yiv04n2dkqz383gdhh0sxdr"; depends=[callr jsonlite magrittr]; }; + webshot = derive2 { name="webshot"; version="0.5.2"; sha256="0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi"; depends=[callr jsonlite magrittr]; }; websocket = derive2 { name="websocket"; version="1.1.0"; sha256="1qw3cb48ha579cijasq23w946p138k2x9yl37kpf51lyaagikzg1"; depends=[AsioHeaders BH later R6 Rcpp]; }; webuse = derive2 { name="webuse"; version="0.1.3"; sha256="09xvw0v991cq1ck2kfxblp5cngfh9j6swvh5xv420mvky0kshv32"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="1.0"; sha256="0khvvfrjhzcjbnsjshbsjgqk2pcvhkw34248f9wglwjmmsh6wbs1"; depends=[curl jsonlite]; }; @@ -14798,7 +15089,7 @@ in with self; { wgaim = derive2 { name="wgaim"; version="2.0-1"; sha256="1qiyfkpsbzjr9xsq5kqq6rlqpndngkn2irdfh3gyi45h6hn118j4"; depends=[ggplot2 qtl]; }; wgeesel = derive2 { name="wgeesel"; version="1.5"; sha256="0lybvsq5168cjybzv2dbyx2z8aakcx7i7ivm8zc90haiispm9n5x"; depends=[bindata CRTgeeDR geepack MASS PoisNor]; }; wheatmap = derive2 { name="wheatmap"; version="0.1.0"; sha256="1c1xvzy194vw3idkwkqp9kyrfldzczj30cl15jw1bbnw87zcwdzy"; depends=[colorspace RColorBrewer]; }; - whereami = derive2 { name="whereami"; version="0.1.8.1"; sha256="007a5wcg80gapqhn3s0sax83fxm55zx36l8rmipkr0c58wi0nr72"; depends=[cli rstudioapi]; }; + whereami = derive2 { name="whereami"; version="0.1.9"; sha256="0mjq9haacsf0zkgh7xxx8dr67hnw5ijjdhaz8c69mfjmd2zfzfwq"; depends=[cli jsonlite rstudioapi]; }; whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; whiboclustering = derive2 { name="whiboclustering"; version="0.1.2"; sha256="0bzzr71kbynzj28i8g5li5j40653nyh08ywgs2xww49qxjm3b9lj"; depends=[cluster clusterCrit]; }; whisker = derive2 { name="whisker"; version="0.4"; sha256="1a7vz0dk95xfjvi38wbpw8vmf5qn3g8p490msz2rw0piwidmk1ks"; depends=[]; }; @@ -14809,9 +15100,9 @@ in with self; { whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; }; wicket = derive2 { name="wicket"; version="0.4.0"; sha256="1lizzmj69bswzlk18fv2v4yxxc6dynvmkymdiafznzcyyz4a8xnf"; depends=[BH Rcpp]; }; widals = derive2 { name="widals"; version="0.5.4"; sha256="1bl59s1r4gkvq4nkf94fk7m0zvhbrszkgmig66lfxhyvk9r84fvb"; depends=[snowfall]; }; - widenet = derive2 { name="widenet"; version="0.1-2"; sha256="1nimm8szbg82vg00f5c7b3f3sk0gplssbl4ggasjnh7dl621vfny"; depends=[glmnet relaxnet]; }; widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; widyr = derive2 { name="widyr"; version="0.1.2"; sha256="0mqj9w5sy8m2vqhjxmjrf68bfixbvmkigrsdzfnwvxp18hhfw5mj"; depends=[broom dplyr Matrix purrr reshape2 tidyr tidytext]; }; + wiesbaden = derive2 { name="wiesbaden"; version="1.2.0"; sha256="09nf25s134livlcgfl0aq5njg50kcw82nmiin6jqzwpjkd35x6vp"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikifacts = derive2 { name="wikifacts"; version="0.1.0"; sha256="01mwzqign59lh7wvf8q8kwkgnfxi9nkk6n0qwfh27q64fajw8clg"; depends=[magrittr rvest xml2]; }; wikilake = derive2 { name="wikilake"; version="0.4"; sha256="0pm0brzkf2k6aknwl4b3fba5ly7mhah8qfb0h94fckiaqbnpyx9v"; depends=[maps rvest selectr sp stringi stringr units WikipediR xml2]; }; @@ -14821,8 +15112,9 @@ in with self; { wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; wildlifeDI = derive2 { name="wildlifeDI"; version="0.3.0"; sha256="1aqiazrr2sp76777m0isscainhdnn9qp87dwpr4cspk7grbsa53k"; depends=[adehabitatLT rgeos sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; - wilson = derive2 { name="wilson"; version="2.0.2"; sha256="0ivd3cm6swhbcg38f66505rwf8h19wcg69mf3p4f9vjif8l13q4s"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs viridis]; }; + wilson = derive2 { name="wilson"; version="2.3.1"; sha256="040hq68l2ja37gx8g6q1nrr9b15v4gmc2l23c772vr4gq9k97977"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r magrittr openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs viridis zip]; }; winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; + windAC = derive2 { name="windAC"; version="1.2.0"; sha256="1dwnj0spxq9n73vg938j5jn0vvzvlqnfb4j0slzxp6lvkkyd2sc4"; depends=[mvtnorm sf]; }; windex = derive2 { name="windex"; version="1.0"; sha256="0ci10x6mm5i03j05fyadxa0ic0ngpyp5nsn05p9m7v1is5jhxci0"; depends=[ape geiger scatterplot3d]; }; windfarmGA = derive2 { name="windfarmGA"; version="2.2.2"; sha256="0gj62b0ppk478xz5f5cwqkb4rhs7fabpx8zl6p0zm1z6dzclq1rc"; depends=[calibrate doParallel foreach ggplot2 gstat leaflet magrittr raster RColorBrewer Rcpp rgdal rworldmap sf sp spatstat]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; @@ -14833,6 +15125,7 @@ in with self; { wkb = derive2 { name="wkb"; version="0.3-0"; sha256="0s7libkg27jdmcw5qmk5j0cmz3nqq7ny4q8gy4vhbgsgj4gbbdn9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; + wmm = derive2 { name="wmm"; version="1.0.0"; sha256="0f46a69vcz1cb4qmz68gf8h0hq5amilsp9h4gmacmprad49n702g"; depends=[]; }; wmtsa = derive2 { name="wmtsa"; version="2.0-3"; sha256="1q436krz5p1f4a7a7sya6a9rh9x9mi8zzcgq66gbk9w9w4hcqcj6"; depends=[ifultools MASS splus2R]; }; wmwpow = derive2 { name="wmwpow"; version="0.1.2"; sha256="0f7gkpr64g2wl9ag70hikyjfqbr4c5nwzyfjwfpdl4a26c2k5xz6"; depends=[lamW MASS smoothmest]; }; wnl = derive2 { name="wnl"; version="0.5.1"; sha256="09xm9x3wz0p9srncw5527slkqrqr37d6kgbzlc2g9zf9frmdlpmb"; depends=[numDeriv]; }; @@ -14849,7 +15142,7 @@ in with self; { wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-14"; sha256="12a21zlc7h973gi1632gngbk8b09vhp3sldh1mh9b5n6h18ga25p"; depends=[rJava]; }; wordspace = derive2 { name="wordspace"; version="0.2-5"; sha256="1xrnzq5hmdwdd7692as4ddjkr64bfgl141xx2gvcla308rxql9yp"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; - workflowr = derive2 { name="workflowr"; version="1.4.0"; sha256="1m7x89wmivcpj4p8qi6dlpf25j4r7l5axa602qq1bx0r050hajrm"; depends=[callr fs getPass git2r glue httr knitr rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; + workflowr = derive2 { name="workflowr"; version="1.5.0"; sha256="0jvdm6kgny84rxmriqq2hrabgdx9v3m5wmypsc5nbwyka94578gl"; depends=[callr fs getPass git2r glue httpuv httr knitr rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; worldmet = derive2 { name="worldmet"; version="0.8.7"; sha256="1hhh3a28xxi5265053gclsbihv41372f64isz9xc5sjdjnpcv6g4"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; }; worms = derive2 { name="worms"; version="0.2.2"; sha256="183chjdi5qvsmdznvc9igcxaz769a37rwh5nzgvf5zf012a85wir"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.4.0"; sha256="0nb02k0aimf6z1fw4y5qzja4xwgwff7gdzh364w2lrhj8imcb044"; depends=[crul data_table jsonlite tibble]; }; @@ -14859,15 +15152,16 @@ in with self; { wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; wpp2015 = derive2 { name="wpp2015"; version="1.1-2"; sha256="07bnbmrshlqnlpca5djpq5crnpsmz228wmbpv1ah7ywnjvks6fyx"; depends=[plyr]; }; wpp2017 = derive2 { name="wpp2017"; version="1.2-1"; sha256="1hg3fj92ja93kw226crfxjvnjb7p0svdbi6pr3sqkg9w5zpwfwp1"; depends=[]; }; - wpp2019 = derive2 { name="wpp2019"; version="1.0-0"; sha256="0652jbwm5xa1031lhpghlh9q1w4xqng21q8ykb759fnqvj1744vm"; depends=[]; }; - wppExplorer = derive2 { name="wppExplorer"; version="2.1-1"; sha256="0n0ayn8bxkrabw2iyqv3hfkdchbk9bzv1lhkjpxnjb6z3zl1sggl"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2017]; }; + wpp2019 = derive2 { name="wpp2019"; version="1.1-0"; sha256="0gx8rgz9lg6crn6ss76sg4xj8dsiwj08fkq5f67slvx4c0cjfhc5"; depends=[]; }; + wppExplorer = derive2 { name="wppExplorer"; version="2.3-2"; sha256="05cvdwfmflciq42zr6v0279fhmsmsgdmqva2zvka95sch09kxci6"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2019]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; + wrMisc = derive2 { name="wrMisc"; version="1.0.4"; sha256="042by7n3xr0ggwna3jlaq56sp8027q0iivs88mqc6mr6pngrs53f"; depends=[MASS]; }; wrangle = derive2 { name="wrangle"; version="0.5.2"; sha256="1b6qgwdjvwbrarp9ylgkb5ia1p5a5g7ws0jyqrwc6hii8z5yj2qb"; depends=[dplyr lazyeval magrittr rlang tidyr]; }; - wrapr = derive2 { name="wrapr"; version="1.9.0"; sha256="0l51r3f391xs9gbfsaan7yb0ygmabbqjn14w107vk3rnikb2lw24"; depends=[]; }; + wrapr = derive2 { name="wrapr"; version="1.9.3"; sha256="1spkjpbx9plyiyr9ndni63cxxb3nxwzwszj2brdz5wj18qhvn86i"; depends=[]; }; wrassp = derive2 { name="wrassp"; version="0.1.8"; sha256="052x0lxpchr6f97yfj3vmhh8gc8qg5pp1m91h5akrav4yfawbs7k"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; - writexl = derive2 { name="writexl"; version="1.1"; sha256="0w4wnpl3yhaqp63p32bk60xrbmd7xd11kxifjbzrghi7d4483a46"; depends=[]; }; + writexl = derive2 { name="writexl"; version="1.2"; sha256="09fhdip6igcg97fjx4c7727cx2lb49l4d74l4i8rg2bag2s5lrj3"; depends=[]; }; wrswoR = derive2 { name="wrswoR"; version="1.1"; sha256="0jnb818xz841bx2i03k3hhy4hxcwpxblskg9nrc8kgbc22rxx4lz"; depends=[logging Rcpp]; }; wrswoR_benchmark = derive2 { name="wrswoR.benchmark"; version="0.2"; sha256="0vzs2lqq48kzk63xz2k9b7qcy0ph5yyvih6z98jfz36kpdfhdps9"; depends=[curl lazyeval]; }; wru = derive2 { name="wru"; version="0.1-9"; sha256="0xrm3f1khggcvdzzk65mnbfcyji3kjz8hrk9d2n4y15nhpbw8p8h"; depends=[devtools]; }; @@ -14875,14 +15169,14 @@ in with self; { wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; }; wsyn = derive2 { name="wsyn"; version="1.0.1"; sha256="1lsaah5dndg1myx3qgbm4hih2wr1zgjfaracnyljfrri2cb436n6"; depends=[fields MASS]; }; wtest = derive2 { name="wtest"; version="3.2"; sha256="063ax9mbb2dy33l1cl533mjzpvhf2akw3613pklfjg6bhprlniz7"; depends=[]; }; - wtss = derive2 { name="wtss"; version="1.1.0"; sha256="019zvmq4z5xy5dwcf4g0z43x2mb14d1lgqhs1zp6821izffpbd0s"; depends=[jsonlite lubridate RCurl roxygen2 zoo]; }; wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; wv = derive2 { name="wv"; version="0.1.0"; sha256="13avx4dydy91aak9bjcqjj2hsbk9f0l4imqmwpg1fdmg6zx7694z"; depends=[coda Rcpp RcppArmadillo simts]; }; wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; wwntests = derive2 { name="wwntests"; version="1.0.0"; sha256="1wsqbhsnzkishqwxz5kjcb5xawafizi3ip4yzxj05p9rx9wja1yc"; depends=[ftsa MASS rainbow sde]; }; - wyz_code_offensiveProgramming = derive2 { name="wyz.code.offensiveProgramming"; version="1.1.12"; sha256="1xj0k9yxk7abh49w85ffxh9zmkgq57xim8409zw9mk8ysx8nv0zv"; depends=[crayon data_table lubridate R6 stringr tidyr]; }; - wyz_code_rdoc = derive2 { name="wyz.code.rdoc"; version="1.1.6"; sha256="0ch46gxhlgp1y4v8xh7jxqd69gm48ncjnsm2y9021lwpx5vgx75l"; depends=[data_table lubridate tidyr wyz_code_offensiveProgramming]; }; - wyz_code_testthat = derive2 { name="wyz.code.testthat"; version="1.1.6"; sha256="18y53n3vjgri01ak099r8c98fgf597bn5f83i7289xg3z9bslqsk"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; + wyz_code_metaTesting = derive2 { name="wyz.code.metaTesting"; version="1.1.4"; sha256="0npk9axsg6x8pgf3f19y2544jlrzf88269604cfdynp724l2dwb9"; depends=[crayon data_table lubridate tidyr wyz_code_offensiveProgramming]; }; + wyz_code_offensiveProgramming = derive2 { name="wyz.code.offensiveProgramming"; version="1.1.14"; sha256="0zh3sqgwrv172dlmiiw5z86pyf1m32xkylixpdlillq731ag79v9"; depends=[crayon data_table lubridate R6 stringr tidyr]; }; + wyz_code_rdoc = derive2 { name="wyz.code.rdoc"; version="1.1.7"; sha256="0rravk8hl2pbr3blsx96xas2zi7c9d83mpzhrqqqna66hg88zq5q"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; + wyz_code_testthat = derive2 { name="wyz.code.testthat"; version="1.1.9"; sha256="0i4jmww0sg5w8ffvk4302jdi3m5bfrbywbx5756r4dijfhv9n2kq"; depends=[data_table lubridate R6 tidyr wyz_code_offensiveProgramming]; }; x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; }; x12 = derive2 { name="x12"; version="1.9.0"; sha256="0hrcw1d52yp5rr4r120lcnfxw2rgs95njg37m28blcnfbq2flfc2"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; @@ -14893,27 +15187,28 @@ in with self; { xRing = derive2 { name="xRing"; version="0.1.0"; sha256="17f1jif8yw2508k86p8mjgw1h20ml5wzaff04ix9xq96plqzi8ma"; depends=[dplR imager tcltk2 tkRplotR]; }; xSub = derive2 { name="xSub"; version="2.0.2"; sha256="00mahp8fi6iskjaf5nwka67a7hqb3i08j8yrd4d2av39zfs268h2"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.12"; sha256="0k7x9cn9pm3dmp88bjzpjf4y8lqnwcmd13sjisrvqkjb82bd3pyq"; depends=[htmltools knitr rmarkdown servr xfun]; }; - xbreed = derive2 { name="xbreed"; version="1.0.1"; sha256="0grrfra9j0k3mqikmrif5qawh4260ayr40irskzpp9ywsixim63h"; depends=[BGLR]; }; + xaringan = derive2 { name="xaringan"; version="0.13"; sha256="1xbrjqa676m7bv6vbr4ydf7c8v6bgpcqiqzjy90vz78rg8c1hcc2"; depends=[htmltools knitr rmarkdown servr xfun]; }; + xbreed = derive2 { name="xbreed"; version="1.0.1.1"; sha256="032i04ginyf9dyabfkygnhrkq7lqdvvyw7s41vjimy2kvjrnkkkx"; depends=[BGLR]; }; xdcclarge = derive2 { name="xdcclarge"; version="0.1.0"; sha256="1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn"; depends=[nlshrink Rcpp RcppArmadillo]; }; xergm = derive2 { name="xergm"; version="1.8.3"; sha256="155469550rsdwszrhw7vdgwz2h0d72a8f4hirrb6hny7f1q63ykk"; depends=[btergm GERGM rem tnam xergm_common]; }; xergm_common = derive2 { name="xergm.common"; version="1.7.7"; sha256="0nfls8a1knmnjjrrw0q93qsfrrb9p3yqsm5dxp13z0780vrzxvcj"; depends=[ergm network]; }; xesreadR = derive2 { name="xesreadR"; version="0.2.3"; sha256="1pvdx0mxg2f885bhy4hb3kqzcgva4q7hzzaipkfzyi5lnjdsbc81"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; - xfun = derive2 { name="xfun"; version="0.10"; sha256="065ygh046ah43p5aqyrkv2vkxcnvnb4j7blfdygysg6hmqzp4pbv"; depends=[]; }; + xfun = derive2 { name="xfun"; version="0.11"; sha256="0dncw6bqkal7nyarrrrj9arxy0y3nkdzmrbibcjh84m1cxd4phiw"; depends=[]; }; xgb2sql = derive2 { name="xgb2sql"; version="0.1.2"; sha256="1gw5dw0ck5hip8mv347zaswrggk395bg2hgn02bvqs0d31jhmgvi"; depends=[data_table xgboost]; }; xgboost = derive2 { name="xgboost"; version="0.90.0.2"; sha256="1gy9rzg43mjpfis893vf15drmbigfn0481zrzss9ajnmnk0q8194"; depends=[data_table magrittr Matrix stringi]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; - xgxr = derive2 { name="xgxr"; version="1.0.3"; sha256="0wjk869viyzd0mb3idgg1ixapc1a7x3v63ndhp2n48wfcbzib9sq"; depends=[assertthat binom dplyr ggplot2 labeling magrittr pander png scales tibble]; }; + xgxr = derive2 { name="xgxr"; version="1.0.5"; sha256="0q97lavhlq66cfkcq1p3jqrknd5dxgsfrsiccgzk84bd8ab42i8h"; depends=[assertthat binom dplyr ggplot2 labeling magrittr pander png scales tibble]; }; xhmmScripts = derive2 { name="xhmmScripts"; version="1.1"; sha256="1qryyb34jx9c64l8bnwp40b08y81agdj5w0icj8dk052x50ip1hl"; depends=[gplots plotrix]; }; xkcd = derive2 { name="xkcd"; version="0.0.6"; sha256="1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f"; depends=[extrafont ggplot2 Hmisc]; }; xkcdcolors = derive2 { name="xkcdcolors"; version="1.0"; sha256="07fnjv01r3b951dqca2zs9b9f6hsgbpbpsrggvb8rps53kpid0i7"; depends=[FNN]; }; xlink = derive2 { name="xlink"; version="1.0.1"; sha256="02ahgjampy92gcwhv269px5w8651a7j50dn1295zwqxj44lk4g9q"; depends=[survival]; }; xlsimple = derive2 { name="xlsimple"; version="0.0.1"; sha256="1x0b2pb1sg2sqmh4z03bchsc9fhcphi6mxk4nbb6my2cr0kqrrdq"; depends=[]; }; xlsx = derive2 { name="xlsx"; version="0.6.1"; sha256="1d58qlzdj4vrk4vnlyzri600ix7z3wnc30gnbcc1qz27nlbbv055"; depends=[rJava xlsxjars]; }; + xlsx2dfs = derive2 { name="xlsx2dfs"; version="0.1.0"; sha256="0bdawr80grks91sy221d33fsk75g20zh3wjg6gvd0zj0m1zvvwvd"; depends=[openxlsx]; }; xlsxjars = derive2 { name="xlsxjars"; version="0.6.1"; sha256="1rka5smm7yqnhhlblpihhciydfap4i6kjaa4a7isdg7qjmzm3h9p"; depends=[rJava]; }; xltabr = derive2 { name="xltabr"; version="0.1.2"; sha256="0pwbpcdiqkhvzxsi6yxly4zza12bw7zc7ji8cvhldw4yl5sxkz1l"; depends=[magrittr openxlsx]; }; xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; - xmeta = derive2 { name="xmeta"; version="1.1-4"; sha256="1y9jldi8qn4jpr05g8fnvb23gig180hh36pc2v4y8n8289s9yvg2"; depends=[aod glmmML metafor mvmeta numDeriv]; }; + xmeta = derive2 { name="xmeta"; version="1.1-5"; sha256="1r2mqrrcl7vmbyydw3kzpskinkiqr919bxgq69i1y6pbfim7jzag"; depends=[aod glmmML metafor mvmeta numDeriv]; }; xml2 = derive2 { name="xml2"; version="1.2.2"; sha256="1x3q3a0xv8j0nx3hs4d3pfjm5g9nvaxmfrapba9f4nrkqi3z2l1h"; depends=[Rcpp]; }; xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.3"; sha256="0gjr3l5z5dp276lchr2649as1rkj56d2mlvbr66yg393zzw50lsh"; depends=[]; }; xmlrpc2 = derive2 { name="xmlrpc2"; version="1.1"; sha256="13rfw0civp3hzi4hn31x1idliid1qb73495x4c31z5msd35lzxrs"; depends=[base64enc curl xml2]; }; @@ -14922,7 +15217,7 @@ in with self; { xopen = derive2 { name="xopen"; version="1.0.0"; sha256="1vrvgdika1d63dwygynbv2wmd87ll8dji5dy89hj576n8hw601z2"; depends=[processx]; }; xplain = derive2 { name="xplain"; version="0.2.1"; sha256="01hl9dxiqqxzdixqccga0sywlhv97pi1l51r9sr7v106s7q11jxn"; depends=[RCurl readr XML]; }; xplorerr = derive2 { name="xplorerr"; version="0.1.1"; sha256="17h8z9rmqkmm6lm9gipa33mr7zxpzd5xbjk251592mwr79lwsh8n"; depends=[magrittr shiny]; }; - xpose = derive2 { name="xpose"; version="0.4.4"; sha256="0ps9v2iiygrzpj1zvw0xbg0cscpvsph3b2w2cv4m602iwkd6372r"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xpose = derive2 { name="xpose"; version="0.4.5"; sha256="08z0n78ah27waj16rlzkvpgr9dy8z93j1lc9pfd3yip2nb9yxx45"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; xpose4 = derive2 { name="xpose4"; version="4.6.1"; sha256="1722ai8r94dmy4d2r728iir0hl2b2gmym8xjsqscfc6jw070734i"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; }; xptr = derive2 { name="xptr"; version="1.1.1"; sha256="1xjmplalf5w7iqkc5dk57g7lvx4jlndg4b2hvqpn05g628bxxdx2"; depends=[]; }; xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; @@ -14956,16 +15251,16 @@ in with self; { yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; yll = derive2 { name="yll"; version="1.0.0"; sha256="0lf3cd6pfzki29nk2iy0vd6v4dw6zlsbrjh2839zq5vlpiimsvck"; depends=[]; }; - ymlthis = derive2 { name="ymlthis"; version="0.1.0"; sha256="02zazpi109ydgs1p4qljnx4wdvhdyx2hpv7vcavv9fwsnkl6s0a3"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; - yonder = derive2 { name="yonder"; version="0.1.1"; sha256="0sb0sahxab1n42cy0kwi6dn9nhbw6vkpdd3k20a62baplxcwabn5"; depends=[htmltools magrittr shiny]; }; + ymlthis = derive2 { name="ymlthis"; version="0.1.1"; sha256="04vf722n0yk50bclv25m11rfvqjja5kjzkn9bbdf8pw3kw83brqa"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; + yonder = derive2 { name="yonder"; version="0.1.2"; sha256="0xw78nmixhp8rb6vd7pgsjqgxdrig8f652hzpiirmqcc87f80ksk"; depends=[htmltools magrittr shiny]; }; yorkr = derive2 { name="yorkr"; version="0.0.7"; sha256="035pmvignq4lip3y5670kxj1n70ff04yy2jwi4837pimr9d0qjhv"; depends=[dplyr ggplot2 gridExtra reshape2 rpart_plot yaml]; }; - youtubecaption = derive2 { name="youtubecaption"; version="0.1.1"; sha256="0q6ifhgmaby3lj089hld7mwaq81522r2d1zsgijc9a9xfcwfqgv0"; depends=[dplyr magrittr purrr reticulate stringr tibble writexl]; }; + youtubecaption = derive2 { name="youtubecaption"; version="0.1.2"; sha256="183zbkzczcidd773ivahfjlsxfayczql10s8qxi3cpdr83f5dv6x"; depends=[dplyr magrittr purrr reticulate stringr tibble writexl]; }; ypr = derive2 { name="ypr"; version="0.3.1"; sha256="0yir9c34i5yncijf6yiliv38glzbfmlr5781nvsnckh8wdb9flgx"; depends=[checkr ggplot2 scales]; }; yuima = derive2 { name="yuima"; version="1.8.1"; sha256="1jzk3623c1cpw9j8d9b96x6n0jwz8h2izzhrdp01cwwskbnv3hq2"; depends=[boot cubature expm mvtnorm Rcpp RcppArmadillo zoo]; }; yuimaGUI = derive2 { name="yuimaGUI"; version="1.3.0"; sha256="1znwfkhnmv9m32izikziqpgxx8gpw50786r81va808x7q058cp5n"; depends=[DT ggplot2 ghyp plotly quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; yum = derive2 { name="yum"; version="0.0.1"; sha256="1q8yxn18nia7jh6g2016hxm81d2jak8pwylr6nai9kfynv9wri0g"; depends=[yaml]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; - zCompositions = derive2 { name="zCompositions"; version="1.3.2-1"; sha256="0xd0vgb6hvhxaqjkxwbgjfkx3mly4wkp40vzlsn2dph720vj87b7"; depends=[MASS NADA truncnorm]; }; + zCompositions = derive2 { name="zCompositions"; version="1.3.3"; sha256="14f4gnvwcw7mcs08dfnrjmrdifvv0h15zaz9ajxkzsazd619mkpj"; depends=[MASS NADA truncnorm]; }; zFactor = derive2 { name="zFactor"; version="0.1.9"; sha256="1x0cfcmnmpb8dq6wn6538ghlz9cm00grv54dj91hvb09i96cp95x"; depends=[covr data_table dplyr ggplot2 knitcitations logging rootSolve tibble tidyr]; }; zTree = derive2 { name="zTree"; version="1.0.6"; sha256="1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv"; depends=[plyr]; }; zbank = derive2 { name="zbank"; version="0.1.0"; sha256="0vzvlri3sncvbz2cdg8wzlpskm1lq9ji0jrfy5cx4ib19m6gxhpc"; depends=[crul jsonlite tibble]; }; @@ -14982,12 +15277,13 @@ in with self; { zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; zip = derive2 { name="zip"; version="2.0.4"; sha256="1c02amk3pl6xir5jnbfiwiv2wvpkpbkkb1w71y6lf2yk7g3d0pdb"; depends=[]; }; zipR = derive2 { name="zipR"; version="0.1.1"; sha256="1aaw3dslhsw3zgxvkc1v60vsk44x64i4qmjwx0gq4f7dad1rbiqp"; depends=[]; }; + zipangu = derive2 { name="zipangu"; version="0.1.0"; sha256="1scl047mj7vpkrpgg2glvrr958p5nrwwcpymbkh4mqbhb90s79bg"; depends=[dplyr lifecycle magrittr purrr rlang stringr]; }; zipcode = derive2 { name="zipcode"; version="1.0"; sha256="1lvlf1h5fv412idpdssjfh4fki933dm5nhr41ppl1mf45b9j7azn"; depends=[]; }; zipfR = derive2 { name="zipfR"; version="0.6-66"; sha256="0fjqa9a4z2p21ywy8h3pg0gwq4gwzjnrl78kn1nswly3w637574h"; depends=[]; }; zipfextR = derive2 { name="zipfextR"; version="1.0.1"; sha256="14p17xxnpnvvinbgjkfxjcmipfanj6vabfh8bzw78k30rl7bj32b"; depends=[copula tolerance VGAM]; }; ziphsmm = derive2 { name="ziphsmm"; version="2.0.6"; sha256="0lm6m2g9jd1v7gxv4viych8c59phbvz1yly1ydgajl8q251d8n87"; depends=[pracma Rcpp RcppArmadillo]; }; zoeppritz = derive2 { name="zoeppritz"; version="1.0-7"; sha256="14j9jl2g7gn94nzs96mwsgwlxnfbr1crjfmfwbi3rk367xi197jb"; depends=[]; }; - zoib = derive2 { name="zoib"; version="1.5.3"; sha256="0qm626z679kpzjxjlkq6fy3jg9x75x1k03pcjh57ar3saa2h96df"; depends=[abind coda Formula matrixcalc rjags]; }; + zoib = derive2 { name="zoib"; version="1.5.4"; sha256="10hv5li1l9gm1bl3k3c9qcmzkqa4ri0kccrsgw1mn8ddn11g9m0a"; depends=[abind coda Formula matrixcalc rjags]; }; zoltr = derive2 { name="zoltr"; version="0.2.2"; sha256="0nxg37h6vlj5g6rxmgzy060h3lwfgjxvcf5gfpsgpg1mjg9h4k3f"; depends=[base64url httr jsonlite mockery readr webmockr]; }; zoo = derive2 { name="zoo"; version="1.8-6"; sha256="1k1pmzr9nfwbxq1xf0jzn3nawv4sgnkxkgzxnm1i887jcbrs85r2"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; @@ -14996,8 +15292,8 @@ in with self; { zooimage = derive2 { name="zooimage"; version="5.5.2"; sha256="0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"; depends=[digest DT filehash jpeg MASS mda mlearning png shiny svDialogs svMisc tiff]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; zoomgrid = derive2 { name="zoomgrid"; version="1.0.0"; sha256="1bjm2b1ll5ikym21ia7k6gfiw1bcplcn4p6fls2298nf20q63kaa"; depends=[]; }; - zoon = derive2 { name="zoon"; version="0.6.3"; sha256="11accyiv9n2zk7fq5bapbmv1ixadab19666i8w41bw642lafgivq"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; }; - zscorer = derive2 { name="zscorer"; version="0.3.0"; sha256="1fhmrkzacbqrsjcwkfc0vv2lz9mwcb1gfdpxajcc06cfkjdq8f4f"; depends=[shiny]; }; + zoon = derive2 { name="zoon"; version="0.6.4"; sha256="1pdhsglp5w2y2pm4irnp849389iakvp03942hhgl9dzc93ad2k14"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; }; + zscorer = derive2 { name="zscorer"; version="0.3.1"; sha256="0aijhs0fyird5gq68x4dxchb02mxa7ijk10k9zjhngghxbjj7iqn"; depends=[shiny]; }; ztable = derive2 { name="ztable"; version="0.2.0"; sha256="0g7khk5ifsdh9p31wlwh2l5mn1hzxzpv6qcn1wh34vsfjdmijjwy"; depends=[flextable magrittr moonBook officer RColorBrewer scales stringr]; }; ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; zyp = derive2 { name="zyp"; version="0.10-1.1"; sha256="03cxpkfbhrx1fy8l0dl9a13ghz93cqq6877wa8rig09ksdiivaw9"; depends=[Kendall]; }; diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index f1a9a9e0e41..2019ee45f3c 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -853,6 +853,11 @@ let PKGCONFIG_LIBS = "-Wl,-rpath,${pkgs.openssl.out}/lib -L${pkgs.openssl.out}/lib -lssl -lcrypto"; }); + websocket = old.websocket.overrideDerivation (attrs: { + PKGCONFIG_CFLAGS = "-I${pkgs.openssl.dev}/include"; + PKGCONFIG_LIBS = "-Wl,-rpath,${pkgs.openssl.out}/lib -L${pkgs.openssl.out}/lib -lssl -lcrypto"; + }); + Rserve = old.Rserve.overrideDerivation (attrs: { patches = [ ./patches/Rserve.patch ]; configureFlags = [ diff --git a/pkgs/development/ruby-modules/gem-config/default.nix b/pkgs/development/ruby-modules/gem-config/default.nix index 18e24d5a31e..de9d06f7ce0 100644 --- a/pkgs/development/ruby-modules/gem-config/default.nix +++ b/pkgs/development/ruby-modules/gem-config/default.nix @@ -536,7 +536,7 @@ in dontBuild = false; postPatch = '' substituteInPlace lib/rbreadline.rb \ - --replace 'infocmp' '${ncurses.dev}/bin/infocmp' + --replace 'infocmp' '${ncurses}/bin/infocmp' ''; }; diff --git a/pkgs/development/ruby-modules/gem/nix-bundle-install.rb b/pkgs/development/ruby-modules/gem/nix-bundle-install.rb index 142d2da9bee..0d501bd9add 100644 --- a/pkgs/development/ruby-modules/gem/nix-bundle-install.rb +++ b/pkgs/development/ruby-modules/gem/nix-bundle-install.rb @@ -5,6 +5,7 @@ require 'rubygems/command' require 'fileutils' require 'pathname' require 'tmpdir' +require 'shellwords' if defined?(Encoding.default_internal) Encoding.default_internal = Encoding::UTF_8 @@ -31,7 +32,7 @@ bin_dir = File.join(ENV["out"], "bin") type = ARGV[0] name = ARGV[1] version = ARGV[2] -build_flags = ARGV[3] +build_flags = Shellwords.split(ARGV[3]) if type == "git" uri = ARGV[4] REPO = ARGV[5] @@ -117,7 +118,7 @@ else source = Bundler::Source::Path.new(options) end spec = source.specs.search_all(name).first -Bundler.rubygems.with_build_args [build_flags] do +Bundler.rubygems.with_build_args build_flags do source.install(spec) end diff --git a/pkgs/development/tools/alloy/default.nix b/pkgs/development/tools/alloy/default.nix index 056bbd85916..0b34055274d 100644 --- a/pkgs/development/tools/alloy/default.nix +++ b/pkgs/development/tools/alloy/default.nix @@ -59,14 +59,14 @@ in rec { }; }; - alloy5 = let version = "5.0.0.1"; in generic { + alloy5 = let version = "5.1.0"; in generic { major = "5"; inherit version; src = fetchurl { - sha256 = "0kz6i9av9ksjk62lx0dxx8xr542iqvbqd14m1f9h8xpf72c25xw4"; - url = "https://github.com/AlloyTools/org.alloytools.alloy/releases/download/v${version}/Alloy-${version}.jar"; + sha256 = "02k9khs4k5nc86x9pp5k3vcb0kiwdgcin46mlap4fycnr673xd53"; + url = "https://github.com/AlloyTools/org.alloytools.alloy/releases/download/v${version}/org.alloytools.alloy.dist.jar"; }; }; - alloy = alloy4; + alloy = alloy5; } diff --git a/pkgs/development/tools/ameba/default.nix b/pkgs/development/tools/ameba/default.nix new file mode 100644 index 00000000000..5ac6c5afa91 --- /dev/null +++ b/pkgs/development/tools/ameba/default.nix @@ -0,0 +1,42 @@ +{ stdenv, lib, fetchFromGitHub, crystal, shards }: + +stdenv.mkDerivation rec { + pname = "ameba"; + version = "0.11.0"; + + src = fetchFromGitHub { + owner = "crystal-ameba"; + repo = "ameba"; + rev = "v${version}"; + sha256 = "0zjv59f555q2w8ahrvmpdzasrifwjgr0mk6rly9yss4ab3rj8cy2"; + }; + + nativeBuildInputs = [ crystal shards ]; + + buildPhase = '' + runHook preBuild + shards build --release + runHook postBuild + ''; + + installPhase = '' + runHook preInstall + install -Dm755 -t $out/bin bin/ameba + runHook postInstall + ''; + + doCheck = true; + + checkPhase = '' + runHook preCheck + crystal spec + runHook postCheck + ''; + + meta = with stdenv.lib; { + description = "A static code analysis tool for Crystal"; + homepage = https://crystal-ameba.github.io; + license = licenses.mit; + maintainers = with maintainers; [ kimburgess ]; + }; +} diff --git a/pkgs/development/tools/analysis/bingrep/default.nix b/pkgs/development/tools/analysis/bingrep/default.nix index 5fd6b402e0b..2367e197f84 100644 --- a/pkgs/development/tools/analysis/bingrep/default.nix +++ b/pkgs/development/tools/analysis/bingrep/default.nix @@ -2,17 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "bingrep"; - version = "0.7.0"; + version = "0.8.1"; src = fetchFromGitHub { owner = "m4b"; repo = pname; - # Currently doesn't tag versions so we're using the raw revision - rev = "33d56a4b020c4a3c111294fe41c613d5e8e9c7af"; - sha256 = "0lg92wqknr584b44i5v4f97js56j89z7n8p2zpm8j1pfhjmgcigs"; + rev = "v${version}"; + sha256 = "1xig3lrw0jdaxibzirqnm50l8nj4si9pa9w0jypmyhf1lr6yzd0g"; }; - cargoSha256 = "1yxm7waldhilx7wh1ag79rkp8kypb9k1px4ynmzq11r72yl2p4m7"; + cargoSha256 = "1fsp1ycfswrzldwnjw5cdwi809fd37pwshvrpf7sp0wmzx2bqhgm"; meta = with stdenv.lib; { description = "Greps through binaries from various OSs and architectures, and colors them"; diff --git a/pkgs/development/tools/analysis/brakeman/default.nix b/pkgs/development/tools/analysis/brakeman/default.nix index 121e1597eb7..edf37efbce9 100644 --- a/pkgs/development/tools/analysis/brakeman/default.nix +++ b/pkgs/development/tools/analysis/brakeman/default.nix @@ -4,13 +4,13 @@ buildRubyGem rec { inherit ruby; name = "${gemName}-${version}"; gemName = "brakeman"; - version = "4.7.1"; - source.sha256 = "149ny2n82hzxw4g8xnimjavs2niq14wl9kwq8zlvadavdg4g9ind"; + version = "4.7.2"; + source.sha256 = "1j1svldxvbl27kpyp9yngfwa0fdqal926sjk0cha7h520wvnz79k"; meta = with lib; { description = "Static analysis security scanner for Ruby on Rails"; - homepage = https://brakemanscanner.org/; - license = [ licenses.cc-by-nc-sa-40 licenses.mit ]; + homepage = "https://brakemanscanner.org/"; + license = [ licenses.unfreeRedistributable ]; platforms = ruby.meta.platforms; maintainers = [ maintainers.marsam ]; }; diff --git a/pkgs/development/tools/analysis/checkstyle/default.nix b/pkgs/development/tools/analysis/checkstyle/default.nix index 2ecb660ff84..009458d4176 100644 --- a/pkgs/development/tools/analysis/checkstyle/default.nix +++ b/pkgs/development/tools/analysis/checkstyle/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, makeWrapper, jre }: stdenv.mkDerivation rec { - version = "8.26"; + version = "8.27"; pname = "checkstyle"; src = fetchurl { url = "https://github.com/checkstyle/checkstyle/releases/download/checkstyle-${version}/checkstyle-${version}-all.jar"; - sha256 = "0q0jb0ip78vai2qcig51lgp9pbb4bsg9wlwjxq0gm61icbxw6vy3"; + sha256 = "1x3klaww0x5ql0jrqfmirni7jbph4hybmkslc268f6knsbs5lijl"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/development/tools/analysis/flow/default.nix b/pkgs/development/tools/analysis/flow/default.nix index 2150ca004c2..ecd8f3a17ec 100644 --- a/pkgs/development/tools/analysis/flow/default.nix +++ b/pkgs/development/tools/analysis/flow/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "flow"; - version = "0.113.0"; + version = "0.114.0"; src = fetchFromGitHub { owner = "facebook"; repo = "flow"; rev = "refs/tags/v${version}"; - sha256 = "1z7zy2ma1rmx2jjrsrnlrv2j5ff4zlzzlqvlmv7fc7dds3wlz6ia"; + sha256 = "1dkp3v898b5vd0a9fl5xknwbbqv23v0icqml8ypyhzrv6wz5qiy3"; }; installPhase = '' @@ -30,6 +30,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A static type checker for JavaScript"; homepage = https://flow.org/; + changelog = "https://github.com/facebook/flow/releases/tag/v${version}"; license = licenses.mit; platforms = ocamlPackages.ocaml.meta.platforms; maintainers = with maintainers; [ marsam puffnfresh ]; diff --git a/pkgs/development/tools/analysis/oclgrind/default.nix b/pkgs/development/tools/analysis/oclgrind/default.nix index 4d1b22a72b5..f5e649d0354 100644 --- a/pkgs/development/tools/analysis/oclgrind/default.nix +++ b/pkgs/development/tools/analysis/oclgrind/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "oclgrind"; - version = "18.3"; # see comment in all-packages.nix + version = "19.10"; src = fetchFromGitHub { owner = "jrprice"; repo = "oclgrind"; rev = "v${version}"; - sha256 = "0s42z3dg684a0gk8qyx2h08cbh95zkrdaaj9y71rrc5bjsg8197x"; + sha256 = "12v5z5x3ls26p3y3yc4mqmh12cazc0nlrwvmfbn6cyg4af9dp0zn"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/tools/analysis/tflint/default.nix b/pkgs/development/tools/analysis/tflint/default.nix index 65a5539028c..79dedb3afba 100644 --- a/pkgs/development/tools/analysis/tflint/default.nix +++ b/pkgs/development/tools/analysis/tflint/default.nix @@ -2,22 +2,23 @@ buildGoModule rec { pname = "tflint"; - version = "0.13.1"; + version = "0.13.3"; src = fetchFromGitHub { owner = "terraform-linters"; repo = pname; rev = "v${version}"; - sha256 = "0ivvx1nbhzijyiv9q05b5953wxga5wdskamnhfvlwpniabic3gxi"; + sha256 = "13azczm5lg9v5mvf1jx165qy2nj2941qlr9vvxa7q3gqmhxcg271"; }; - modSha256 = "0q1sc0bj4a29rzly4fk6m40b8i7syxa7ff9882jwi7gxjdiklch3"; + modSha256 = "0xckzyfc144bc212amw1n63jkmdljbmj0rq0midr37h6bg5a10q3"; subPackages = [ "." ]; meta = with lib; { description = "Terraform linter focused on possible errors, best practices, and so on"; homepage = "https://github.com/terraform-linters/tflint"; + changelog = "https://github.com/terraform-linters/tflint/releases/tag/v${version}"; license = licenses.mpl20; maintainers = [ maintainers.marsam ]; }; diff --git a/pkgs/development/tools/analysis/tfsec/default.nix b/pkgs/development/tools/analysis/tfsec/default.nix index 80c23205c40..953e9f5b95a 100644 --- a/pkgs/development/tools/analysis/tfsec/default.nix +++ b/pkgs/development/tools/analysis/tfsec/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "tfsec"; - version = "0.12.2"; + version = "0.13.0"; src = fetchFromGitHub { owner = "liamg"; repo = pname; rev = "v${version}"; - sha256 = "1xrhsl60xf7230z4d2dyy86406a2306yfqchijrz0957xpkrik2r"; + sha256 = "1nv7wdchbgf3y265kghhy8rbyvbs03ys5gv9622v0f2kswscy9xl"; }; goPackagePath = "github.com/liamg/tfsec"; diff --git a/pkgs/development/tools/analysis/valgrind/default.nix b/pkgs/development/tools/analysis/valgrind/default.nix index b5abff94c79..8e2db5caab1 100644 --- a/pkgs/development/tools/analysis/valgrind/default.nix +++ b/pkgs/development/tools/analysis/valgrind/default.nix @@ -16,6 +16,9 @@ stdenv.mkDerivation rec { # Perl is needed for `callgrind_{annotate,control}'. buildInputs = [ gdb perl ] ++ stdenv.lib.optionals (stdenv.isDarwin) [ bootstrap_cmds xnu ]; + # Perl is also a native build input. + nativeBuildInputs = [ perl ]; + enableParallelBuilding = true; separateDebugInfo = stdenv.isLinux; diff --git a/pkgs/development/tools/apktool/default.nix b/pkgs/development/tools/apktool/default.nix index 56f9f98856c..76037f98e1b 100644 --- a/pkgs/development/tools/apktool/default.nix +++ b/pkgs/development/tools/apktool/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "apktool"; - version = "2.4.0"; + version = "2.4.1"; src = fetchurl { urls = [ "https://bitbucket.org/iBotPeaches/apktool/downloads/apktool_${version}.jar" "https://github.com/iBotPeaches/Apktool/releases/download/v${version}/apktool_${version}.jar" ]; - sha256 = "1hdwgsw3ggmdzv523wq037kjxhxqp1xq8n8m1qb22vvdj7l1dwd0"; + sha256 = "0ljsh8nx065isnyzzrwddypikkfhyqsww0w02cgwgh8x3lhndsxx"; }; phases = [ "installPhase" ]; diff --git a/pkgs/development/tools/aws-sam-cli/default.nix b/pkgs/development/tools/aws-sam-cli/default.nix index 12cce3e8d46..43cb26a30d8 100644 --- a/pkgs/development/tools/aws-sam-cli/default.nix +++ b/pkgs/development/tools/aws-sam-cli/default.nix @@ -62,10 +62,12 @@ buildPythonApplication rec { # fix over-restrictive version bounds postPatch = '' - substituteInPlace requirements/base.txt --replace "requests==2.20.1" "requests==2.22.0" - substituteInPlace requirements/base.txt --replace "serverlessrepo==0.1.9" "serverlessrepo~=0.1.9" - substituteInPlace requirements/base.txt --replace "six~=1.11.0" "six~=1.12.0" - substituteInPlace requirements/base.txt --replace "PyYAML~=3.12" "PyYAML~=5.1" + substituteInPlace requirements/base.txt \ + --replace "requests==2.20.1" "requests==2.22.0" \ + --replace "serverlessrepo==0.1.9" "serverlessrepo~=0.1.9" \ + --replace "six~=1.11.0" "six~=1.12.0" \ + --replace "python-dateutil~=2.6, <2.8.1" "python-dateutil~=2.6" \ + --replace "PyYAML~=3.12" "PyYAML~=5.1" ''; meta = with lib; { diff --git a/pkgs/development/tools/azcopy/default.nix b/pkgs/development/tools/azcopy/default.nix index 403d0ab745a..e3e85ffcd40 100644 --- a/pkgs/development/tools/azcopy/default.nix +++ b/pkgs/development/tools/azcopy/default.nix @@ -1,20 +1,24 @@ -{ stdenv, fetchFromGitHub, buildGoPackage }: +{ stdenv, fetchFromGitHub, buildGoModule }: -buildGoPackage rec { +buildGoModule rec { pname = "azure-storage-azcopy"; - version = "10.0.1-pre"; - revision = "10.0.1"; - goPackagePath = "github.com/Azure/azure-storage-azcopy"; - - goDeps= ./deps.nix; + version = "10.3.2"; src = fetchFromGitHub { owner = "Azure"; repo = "azure-storage-azcopy"; - rev = revision; - sha256 = "0v1qli01nnx81186q1d2556w457qkbwypq6yy89ns52pqg941arp"; + rev = "v${version}"; + sha256 = "0n4yns81kwwx725smsgqg8hc693ygqlzrgkqdrhrfszkpm205479"; }; + subPackages = [ "." ]; + + modSha256 = "07cy2zi7m2pkbfdcy659x4k5j2w60cmjy8kxv1dcii3dc6ls4bvb"; + + postInstall = '' + ln -rs "$out/bin/azure-storage-azcopy" "$out/bin/azcopy" + ''; + meta = with stdenv.lib; { maintainers = with maintainers; [ colemickens ]; license = licenses.mit; diff --git a/pkgs/development/tools/azcopy/deps.nix b/pkgs/development/tools/azcopy/deps.nix deleted file mode 100644 index cef400200d0..00000000000 --- a/pkgs/development/tools/azcopy/deps.nix +++ /dev/null @@ -1,129 +0,0 @@ -# file generated from Gopkg.lock using dep2nix (https://github.com/nixcloud/dep2nix) -[ - { - goPackagePath = "github.com/Azure/azure-pipeline-go"; - fetch = { - type = "git"; - url = "https://github.com/Azure/azure-pipeline-go"; - rev = "7571e8eb0876932ab505918ff7ed5107773e5ee2"; - sha256 = "0i8n7jna9prq3zdbj0bsr1ha271lgg9233n71dw8li5qsiyg8bs2"; - }; - } - { - goPackagePath = "github.com/Azure/azure-storage-blob-go"; - fetch = { - type = "git"; - url = "https://github.com/Azure/azure-storage-blob-go"; - rev = "197d1c0aea1b9eedbbaee0a1a32bf81e879bde80"; - sha256 = "0wslfah8x1i5l98ss4wxv47ddxfp8mbc90cnfi81v7qnf0bpjp2g"; - }; - } - { - goPackagePath = "github.com/Azure/azure-storage-file-go"; - fetch = { - type = "git"; - url = "https://github.com/Azure/azure-storage-file-go"; - rev = "9227fd295d972e4395fd601e6f48cee2f5cda02b"; - sha256 = "0sr5iqiddjs2lnma5ixrrdik9zciqqd74priivvpycgi3cyxyxyn"; - }; - } - { - goPackagePath = "github.com/Azure/go-autorest"; - fetch = { - type = "git"; - url = "https://github.com/Azure/go-autorest"; - rev = "39013ecb48eaf6ced3f4e3e1d95515140ce6b3cf"; - sha256 = "1cbf1ay68lghr4swy2a0asfcjpzkamvz1cqxpdm6691b76j2x6cm"; - }; - } - { - goPackagePath = "github.com/JeffreyRichter/enum"; - fetch = { - type = "git"; - url = "https://github.com/JeffreyRichter/enum"; - rev = "2567042f9cda26772f0afe08bab6e5105745f298"; - sha256 = "1d2sjjlp0r2ynk1fb3sb7dgbqzbq4czipb7ffm9zdmjbz0gp6crr"; - }; - } - { - goPackagePath = "github.com/dgrijalva/jwt-go"; - fetch = { - type = "git"; - url = "https://github.com/dgrijalva/jwt-go"; - rev = "06ea1031745cb8b3dab3f6a236daf2b0aa468b7e"; - sha256 = "08m27vlms74pfy5z79w67f9lk9zkx6a9jd68k3c4msxy75ry36mp"; - }; - } - { - goPackagePath = "github.com/inconshreveable/mousetrap"; - fetch = { - type = "git"; - url = "https://github.com/inconshreveable/mousetrap"; - rev = "76626ae9c91c4f2a10f34cad8ce83ea42c93bb75"; - sha256 = "1mn0kg48xkd74brf48qf5hzp0bc6g8cf5a77w895rl3qnlpfw152"; - }; - } - { - goPackagePath = "github.com/jiacfan/keychain"; - fetch = { - type = "git"; - url = "https://github.com/jiacfan/keychain"; - rev = "55285221316b0547171a4258015906e3a4da4721"; - sha256 = "0nfpmqmj33953awysp1948y6k28cmh4770q0i60jv88k35p10s56"; - }; - } - { - goPackagePath = "github.com/jiacfan/keyctl"; - fetch = { - type = "git"; - url = "https://github.com/jiacfan/keyctl"; - rev = "988d05162bc59cf7789c35af405be8f1599a87a3"; - sha256 = "1q4svv9z3s3n2x4ff8cyr53g5ln1yfrcmc3bvznhhwq190dhm94c"; - }; - } - { - goPackagePath = "github.com/kr/pretty"; - fetch = { - type = "git"; - url = "https://github.com/kr/pretty"; - rev = "73f6ac0b30a98e433b289500d779f50c1a6f0712"; - sha256 = "18m4pwg2abd0j9cn5v3k2ksk9ig4vlwxmlw9rrglanziv9l967qp"; - }; - } - { - goPackagePath = "github.com/kr/text"; - fetch = { - type = "git"; - url = "https://github.com/kr/text"; - rev = "e2ffdb16a802fe2bb95e2e35ff34f0e53aeef34f"; - sha256 = "1gm5bsl01apvc84bw06hasawyqm4q84vx1pm32wr9jnd7a8vjgj1"; - }; - } - { - goPackagePath = "github.com/spf13/cobra"; - fetch = { - type = "git"; - url = "https://github.com/spf13/cobra"; - rev = "ef82de70bb3f60c65fb8eebacbb2d122ef517385"; - sha256 = "1q1nsx05svyv9fv3fy6xv6gs9ffimkyzsfm49flvl3wnvf1ncrkd"; - }; - } - { - goPackagePath = "github.com/spf13/pflag"; - fetch = { - type = "git"; - url = "https://github.com/spf13/pflag"; - rev = "9a97c102cda95a86cec2345a6f09f55a939babf5"; - sha256 = "005598piihl3l83a71ahj10cpq9pbhjck4xishx1b4dzc02r9xr2"; - }; - } - { - goPackagePath = "gopkg.in/check.v1"; - fetch = { - type = "git"; - url = "https://github.com/go-check/check"; - rev = "788fd78401277ebd861206a03c884797c6ec5541"; - sha256 = "0v3bim0j375z81zrpr5qv42knqs0y2qv2vkjiqi5axvb78slki1a"; - }; - } -] \ No newline at end of file diff --git a/pkgs/development/tools/build-managers/apache-maven/default.nix b/pkgs/development/tools/build-managers/apache-maven/default.nix index 89103ee540c..9194eda3361 100644 --- a/pkgs/development/tools/build-managers/apache-maven/default.nix +++ b/pkgs/development/tools/build-managers/apache-maven/default.nix @@ -2,7 +2,7 @@ assert jdk != null; -let version = "3.6.2"; in +let version = "3.6.3"; in stdenv.mkDerivation rec { pname = "apache-maven"; inherit version; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://apache/maven/maven-3/${version}/binaries/${pname}-${version}-bin.tar.gz"; - sha256 = "1p6z6bmjfzda8kxy73jjg03yfkbssbb3vgvzspxxd0hljv8r5g1z"; + sha256 = "1i9qlj3vy4j1yyf22nwisd0pg88n9qzp9ymfhwqabadka7br3b96"; }; buildInputs = [ makeWrapper ]; diff --git a/pkgs/development/tools/build-managers/bazel/bazel_rc.patch b/pkgs/development/tools/build-managers/bazel/bazel_rc.patch new file mode 100644 index 00000000000..a599ac3ec72 --- /dev/null +++ b/pkgs/development/tools/build-managers/bazel/bazel_rc.patch @@ -0,0 +1,13 @@ +diff --git a/src/main/cpp/option_processor.cc b/src/main/cpp/option_processor.cc +index 8f8f15685f..a7ae52d1e4 100644 +--- a/src/main/cpp/option_processor.cc ++++ b/src/main/cpp/option_processor.cc +@@ -56,7 +56,7 @@ OptionProcessor::OptionProcessor( + : workspace_layout_(workspace_layout), + startup_options_(std::move(default_startup_options)), + parse_options_called_(false), +- system_bazelrc_path_(BAZEL_SYSTEM_BAZELRC_PATH) {} ++ system_bazelrc_path_("@bazelSystemBazelRCPath@") {} + + OptionProcessor::OptionProcessor( + const WorkspaceLayout* workspace_layout, diff --git a/pkgs/development/tools/build-managers/bazel/default.nix b/pkgs/development/tools/build-managers/bazel/default.nix index aef94073219..e82bbb4aba1 100644 --- a/pkgs/development/tools/build-managers/bazel/default.nix +++ b/pkgs/development/tools/build-managers/bazel/default.nix @@ -21,6 +21,7 @@ , autoPatchelfHook , file , substituteAll +, writeTextFile }: let @@ -126,6 +127,18 @@ let ''; }; + bazelRC = writeTextFile { + name = "bazel-rc"; + text = '' + build --override_repository=${remote_java_tools.name}=${remote_java_tools} + build --distdir=${distDir} + startup --server_javabase=${runJdk} + + # load default location for the system wide configuration + try-import /etc/bazel.bazelrc + ''; + }; + in stdenv.mkDerivation rec { pname = "bazel"; @@ -158,6 +171,13 @@ stdenv.mkDerivation rec { src = ./strict_action_env.patch; strictActionEnvPatch = defaultShellPath; }) + + # bazel reads its system bazelrc in /etc + # override this path to a builtin one + (substituteAll { + src = ./bazel_rc.patch; + bazelSystemBazelRCPath = bazelRC; + }) ] ++ lib.optional enableNixHacks ./nix-hacks.patch; @@ -418,12 +438,6 @@ stdenv.mkDerivation rec { mv runfiles.bash.tmp tools/bash/runfiles/runfiles.bash patchShebangs . - - # bazel reads its system bazelrc in /etc - # override this path to a builtin one - substituteInPlace \ - src/main/cpp/option_processor.cc \ - --replace BAZEL_SYSTEM_BAZELRC_PATH "\"$out/etc/bazelrc\"" ''; in lib.optionalString stdenv.hostPlatform.isDarwin darwinPatches + genericPatches; @@ -475,15 +489,6 @@ stdenv.mkDerivation rec { cp ./bazel_src/scripts/packages/bazel.sh $out/bin/bazel mv ./bazel_src/output/bazel $out/bin/bazel-real - wrapProgram "$out/bin/bazel" --add-flags --server_javabase="${runJdk}" - - # generates the system bazelrc - # warning: the name of the repository depends on the system, hence - # the reference to .name - mkdir $out/etc - echo "build --override_repository=${remote_java_tools.name}=${remote_java_tools}" > $out/etc/bazelrc - echo "build --distdir=${distDir}" >> $out/etc/bazelrc - # shell completion files mkdir -p $out/share/bash-completion/completions $out/share/zsh/site-functions mv ./bazel_src/output/bazel-complete.bash $out/share/bash-completion/completions/bazel diff --git a/pkgs/development/tools/build-managers/cmake/default.nix b/pkgs/development/tools/build-managers/cmake/default.nix index 3cd724b1a31..37a44f15e9c 100644 --- a/pkgs/development/tools/build-managers/cmake/default.nix +++ b/pkgs/development/tools/build-managers/cmake/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, pkgconfig +{ stdenv, lib, fetchurl, fetchpatch, pkgconfig , bzip2, curl, expat, libarchive, xz, zlib, libuv, rhash , buildPackages # darwin attributes @@ -36,6 +36,13 @@ stdenv.mkDerivation rec { # Derived from https://github.com/libuv/libuv/commit/1a5d4f08238dd532c3718e210078de1186a5920d ./libuv-application-services.patch + + # Fix for harfbuzz with pango versions > 1.43. + # Should be removed with cmake >= 3.16 + (fetchpatch { + url = "https://gitlab.kitware.com/cmake/cmake/commit/effafca77eacbb4988006b1f3f4d9154df6c33f8.diff"; + sha256 = "0vxam5kka1dffygp1nd0g21ib9qk8kds8iprbfga2gimzyrlfmfr"; + }) ] ++ lib.optional stdenv.isCygwin ./3.2.2-cygwin.patch; outputs = [ "out" ]; diff --git a/pkgs/development/tools/build-managers/meson/default.nix b/pkgs/development/tools/build-managers/meson/default.nix index 6633d101ce4..49d7287087f 100644 --- a/pkgs/development/tools/build-managers/meson/default.nix +++ b/pkgs/development/tools/build-managers/meson/default.nix @@ -19,11 +19,11 @@ let in python3Packages.buildPythonApplication rec { pname = "meson"; - version = "0.51.2"; + version = "0.52.1"; src = python3Packages.fetchPypi { inherit pname version; - sha256 = "0cqhkjbab1mbvxmbjvyfrbjfkm7bh436svqpjapca36c2k9h1vwr"; + sha256 = "02fnrk1fjf3yiix0ak0m9vgbpl4h97fafii5pmw7phmvnlv9fyan"; }; postFixup = '' @@ -69,23 +69,6 @@ python3Packages.buildPythonApplication rec { url = "https://github.com/mesonbuild/meson/commit/972ede1d14fdf17fe5bb8fb99be220f9395c2392.patch"; sha256 = "19bfsylhpy0b2xv3ks8ac9x3q6vvvyj1wjcy971v9d5f1455xhbb"; }) - ] ++ lib.optionals stdenv.isDarwin [ - # We use custom Clang, which makes Meson think *not Apple*, while still - # relying on system linker. When it detects standard Clang, Meson will - # pass it `-Wl,-O1` flag but optimizations are not recognized by - # Mac linker. - # https://github.com/mesonbuild/meson/issues/4784 - # Should be fixed in 0.52 - ./fix-objc-linking.patch - - # Fixes error finding some frameworks - # https://github.com/NixOS/nixpkgs/pull/70690#issuecomment-553704175 - # https://github.com/mesonbuild/meson/pull/5980 - # Should be fixed in 0.52 - (fetchpatch { - url = "https://github.com/mesonbuild/meson/commit/8d3fcb3dc4d7204a4646807f8b5191d79fb291e5.patch"; - sha256 = "0g95gl662mribnnz5jcyn1jaaw8w7r1vgbg2jbm91dcrr5zji5ng"; - }) ]; setupHook = ./setup-hook.sh; diff --git a/pkgs/development/tools/build-managers/meson/fix-objc-linking.patch b/pkgs/development/tools/build-managers/meson/fix-objc-linking.patch deleted file mode 100644 index 996e0c3420e..00000000000 --- a/pkgs/development/tools/build-managers/meson/fix-objc-linking.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff --git a/mesonbuild/environment.py b/mesonbuild/environment.py -index dc8f099b..d8581fcf 100644 ---- a/mesonbuild/environment.py -+++ b/mesonbuild/environment.py -@@ -944,7 +944,7 @@ - compiler_type = self.get_gnu_compiler_type(defines) - version = self.get_gnu_version_from_defines(defines) - return GnuObjCCompiler(ccache + compiler, version, compiler_type, for_machine, is_cross, exe_wrap, defines) -- if out.startswith('Apple LLVM') or out.startswith('Apple clang'): -+ if out.startswith('Apple LLVM') or out.startswith('Apple clang') or self.machines.build.is_darwin(): - return ClangObjCCompiler(ccache + compiler, version, CompilerType.CLANG_OSX, for_machine, is_cross, exe_wrap) - if 'windows' in out: - return ClangObjCCompiler(ccache + compiler, version, CompilerType.CLANG_MINGW, for_machine, is_cross, exe_wrap) -@@ -974,7 +974,7 @@ - compiler_type = self.get_gnu_compiler_type(defines) - version = self.get_gnu_version_from_defines(defines) - return GnuObjCPPCompiler(ccache + compiler, version, compiler_type, for_machine, is_cross, exe_wrap, defines) -- if out.startswith('Apple LLVM') or out.startswith('Apple clang'): -+ if out.startswith('Apple LLVM') or out.startswith('Apple clang') or self.machines.build.is_darwin(): - return ClangObjCPPCompiler(ccache + compiler, version, CompilerType.CLANG_OSX, for_machine, is_cross, exe_wrap) - if 'windows' in out: - return ClangObjCPPCompiler(ccache + compiler, version, CompilerType.CLANG_MINGW, for_machine, is_cross, exe_wrap) diff --git a/pkgs/development/tools/build-managers/meson/fix-rpath.patch b/pkgs/development/tools/build-managers/meson/fix-rpath.patch index 1a5f8cb89dc..6cf7afc2bdf 100644 --- a/pkgs/development/tools/build-managers/meson/fix-rpath.patch +++ b/pkgs/development/tools/build-managers/meson/fix-rpath.patch @@ -1,21 +1,34 @@ ---- a/mesonbuild/compilers/compilers.py -+++ b/mesonbuild/compilers/compilers.py -@@ -1202,8 +1202,10 @@ - # In order to avoid relinking for RPATH removal, the binary needs to contain just - # enough space in the ELF header to hold the final installation RPATH. - paths = ':'.join(all_paths) -- if len(paths) < len(install_rpath): -- padding = 'X' * (len(install_rpath) - len(paths)) -+ store_paths = ':'.join(filter(lambda path: path.startswith('@storeDir@'), all_paths)) -+ extra_space_needed = len(install_rpath + (':' if install_rpath and store_paths else '') + store_paths) - len(paths) -+ if extra_space_needed > 0: -+ padding = 'X' * extra_space_needed - if not paths: - paths = padding - else: +--- a/mesonbuild/linkers.py ++++ b/mesonbuild/linkers.py +@@ -527,8 +527,10 @@ class GnuLikeDynamicLinkerMixin: + # In order to avoid relinking for RPATH removal, the binary needs to contain just + # enough space in the ELF header to hold the final installation RPATH. + paths = ':'.join(all_paths) +- if len(paths) < len(install_rpath): +- padding = 'X' * (len(install_rpath) - len(paths)) ++ store_paths = ':'.join(filter(lambda path: path.startswith('@storeDir@'), all_paths)) ++ extra_space_needed = len(install_rpath + (':' if install_rpath and store_paths else '') + store_paths) - len(paths) ++ if extra_space_needed > 0: ++ padding = 'X' * extra_space_needed + if not paths: + paths = padding + else: +@@ -902,8 +904,10 @@ class SolarisDynamicLinker(PosixDynamicLinkerMixin, DynamicLinker): + # In order to avoid relinking for RPATH removal, the binary needs to contain just + # enough space in the ELF header to hold the final installation RPATH. + paths = ':'.join(all_paths) +- if len(paths) < len(install_rpath): +- padding = 'X' * (len(install_rpath) - len(paths)) ++ store_paths = ':'.join(filter(lambda path: path.startswith('@storeDir@'), all_paths)) ++ extra_space_needed = len(install_rpath + (':' if install_rpath and store_paths else '') + store_paths) - len(paths) ++ if extra_space_needed > 0: ++ padding = 'X' * extra_space_needed + if not paths: + paths = padding + else: --- a/mesonbuild/scripts/depfixer.py +++ b/mesonbuild/scripts/depfixer.py -@@ -303,6 +303,14 @@ +@@ -303,6 +303,14 @@ class Elf(DataSizes): return self.bf.seek(rp_off) old_rpath = self.read_str() @@ -30,7 +43,7 @@ if len(old_rpath) < len(new_rpath): sys.exit("New rpath must not be longer than the old one.") # The linker does read-only string deduplication. If there is a -@@ -316,6 +324,10 @@ +@@ -316,6 +324,10 @@ class Elf(DataSizes): if not new_rpath: self.remove_rpath_entry(entrynum) else: diff --git a/pkgs/development/tools/build-managers/meson/gir-fallback-path.patch b/pkgs/development/tools/build-managers/meson/gir-fallback-path.patch index 7a33d4127fa..e59795486aa 100644 --- a/pkgs/development/tools/build-managers/meson/gir-fallback-path.patch +++ b/pkgs/development/tools/build-managers/meson/gir-fallback-path.patch @@ -1,8 +1,8 @@ --- a/mesonbuild/modules/gnome.py +++ b/mesonbuild/modules/gnome.py -@@ -805,6 +805,13 @@ - scan_command += self._scan_langs(state, [lc[0] for lc in langs_compilers]) - scan_command += list(external_ldflags) +@@ -801,6 +801,13 @@ class GnomeModule(ExtensionModule): + scan_command += ['--sources-top-dirs', os.path.join(state.environment.get_source_dir(), self.interpreter.subproject_dir, state.subproject)] + scan_command += ['--sources-top-dirs', os.path.join(state.environment.get_build_dir(), self.interpreter.subproject_dir, state.subproject)] + if len(set([girtarget.get_custom_install_dir()[0] for girtarget in girtargets])) > 1: + raise MesonException('generate_gir tries to build multiple libraries with different install_dir at once: {}'.format(','.join([str(girtarget) for girtarget in girtargets]))) diff --git a/pkgs/development/tools/build-managers/mill/default.nix b/pkgs/development/tools/build-managers/mill/default.nix index 71df187eaa5..6a4431be0eb 100644 --- a/pkgs/development/tools/build-managers/mill/default.nix +++ b/pkgs/development/tools/build-managers/mill/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "mill"; - version = "0.5.2"; + version = "0.5.3"; src = fetchurl { url = "https://github.com/lihaoyi/mill/releases/download/${version}/${version}"; - sha256 = "14az9znpbaads5dbcfpzw38yipmncz94i6gcl6bdjgngn0barhga"; + sha256 = "1m4p0d15qgayfnknvl99sd1kpgrqfaj1yczvwh7ip0gxcladn1wv"; }; nativeBuildInputs = [ makeWrapper ]; @@ -19,7 +19,10 @@ stdenv.mkDerivation rec { runHook preInstall install -Dm555 "$src" "$out/bin/.mill-wrapped" # can't use wrapProgram because it sets --argv0 - makeWrapper "$out/bin/.mill-wrapped" "$out/bin/mill" --set JAVA_HOME "${jre}" + makeWrapper "$out/bin/.mill-wrapped" "$out/bin/mill" \ + --prefix PATH : "${jre}/bin" \ + --set JAVA_HOME "${jre}" \ + --set MILL_VERSION "${version}" runHook postInstall ''; diff --git a/pkgs/development/tools/buildah/default.nix b/pkgs/development/tools/buildah/default.nix index 6810a053a80..db01a068c00 100644 --- a/pkgs/development/tools/buildah/default.nix +++ b/pkgs/development/tools/buildah/default.nix @@ -4,13 +4,13 @@ buildGoPackage rec { pname = "buildah"; - version = "1.11.6"; + version = "1.12.0"; src = fetchFromGitHub { owner = "containers"; repo = "buildah"; rev = "v${version}"; - sha256 = "0slhq11nmqsp2rjfwldvcwlpj823ckfpipggkaxhcb66dv8ymm7n"; + sha256 = "0lsjsfp6ls38vlgibbnsyd1m7jvmjwdmpyrd0qigp4aa2abwi4dg"; }; outputs = [ "bin" "man" "out" ]; diff --git a/pkgs/development/tools/cmake-format/default.nix b/pkgs/development/tools/cmake-format/default.nix index 5726b067e67..69fbfecc18f 100644 --- a/pkgs/development/tools/cmake-format/default.nix +++ b/pkgs/development/tools/cmake-format/default.nix @@ -10,12 +10,12 @@ buildPythonApplication rec { pname = "cmake-format"; - version = "0.6.0"; + version = "0.6.3"; src = fetchPypi { inherit version; pname = "cmake_format"; - sha256 = "0sip832bxsvnm7fhqhx49d53g2s7swdk3fhyhlglm2shgj89b5zw"; + sha256 = "12fsgmqimc09qhkrqzi5n5qq3rigkagymn0cx6ayn2qglh8pwknw"; }; propagatedBuildInputs = [ autopep8 flake8 jinja2 pylint pyyaml ]; diff --git a/pkgs/development/tools/continuous-integration/fly/default.nix b/pkgs/development/tools/continuous-integration/fly/default.nix index 3f394472c40..1a56be02a28 100644 --- a/pkgs/development/tools/continuous-integration/fly/default.nix +++ b/pkgs/development/tools/continuous-integration/fly/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "fly"; - version = "5.4.1"; + version = "5.7.2"; src = fetchFromGitHub { owner = "concourse"; repo = "concourse"; rev = "v${version}"; - sha256 = "15lkhdvxqcryn5k7qflkby666ddj66gpqzga13yxjgjjp7zx2mi3"; + sha256 = "1jhc2h00rh6lpgdq3n2d1sk7gdzmhkigyra04gf70s6kjb903igw"; }; - modSha256 = "0wz0v7w2di23cvqpg35zzqs2hvsbjgcrl7pr90ymmpsspq97fkf7"; + modSha256 = "00qagz28iz1z5kjshs1m74bf12qlhjbkf4pbchy7lzf09bd291pg"; subPackages = [ "fly" ]; diff --git a/pkgs/development/tools/cue/default.nix b/pkgs/development/tools/cue/default.nix index 2046ea90fd1..98bf5249b62 100644 --- a/pkgs/development/tools/cue/default.nix +++ b/pkgs/development/tools/cue/default.nix @@ -2,12 +2,12 @@ buildGoModule rec { pname = "cue"; - version = "0.0.14"; + version = "0.0.15"; src = fetchgit { url = "https://cue.googlesource.com/cue"; rev = "v${version}"; - sha256 = "1gbw377wm41bhn9pw0l5l7v6g5s9jw1p2jammflac7hgwdrxkb64"; + sha256 = "0mipzci2zjp6yh4lxg9jrdxn03ska188zg3jl6g1zr8rn0ry274h"; }; modSha256 = "04dapx75zwi8cv1pj3c6266znrhwihv3df4izm3gjk34r2i07q6s"; diff --git a/pkgs/development/tools/database/pgcli/default.nix b/pkgs/development/tools/database/pgcli/default.nix index 147988b22b3..03f0ae3c444 100644 --- a/pkgs/development/tools/database/pgcli/default.nix +++ b/pkgs/development/tools/database/pgcli/default.nix @@ -1,17 +1,17 @@ -{ buildPythonApplication, lib, fetchPypi, isPy3k, fetchpatch +{ buildPythonApplication, lib, fetchPypi, isPy3k , cli-helpers, click, configobj, humanize, prompt_toolkit, psycopg2 , pygments, sqlparse, pgspecial, setproctitle, keyring, pytest, mock }: buildPythonApplication rec { pname = "pgcli"; - version = "2.1.1"; + version = "2.2.0"; disabled = !isPy3k; src = fetchPypi { inherit pname version; - sha256 = "1jmnb8izsdjmq9cgajhfapr31wlhvcml4lakz2mcmjn355x83q44"; + sha256 = "54138a31e6736a34c63b84a6d134c9292c9a73543cc0f66e80a0aaf79259d39b"; }; propagatedBuildInputs = [ @@ -21,9 +21,10 @@ buildPythonApplication rec { checkInputs = [ pytest mock ]; - # One test fails: https://github.com/dbcli/pgcli/issues/1104 - doCheck = false; - checkPhase = "pytest"; + # `test_application_name_db_uri` fails: https://github.com/dbcli/pgcli/issues/1104 + checkPhase = '' + pytest --deselect=tests/test_main.py::test_application_name_db_uri + ''; meta = with lib; { description = "Command-line interface for PostgreSQL"; diff --git a/pkgs/development/tools/erlang/hex2nix/default.nix b/pkgs/development/tools/erlang/hex2nix/default.nix deleted file mode 100644 index 5155632169f..00000000000 --- a/pkgs/development/tools/erlang/hex2nix/default.nix +++ /dev/null @@ -1,21 +0,0 @@ -{ fetchFromGitHub, fetchRebar3Deps, rebar3Relx }: - -rebar3Relx rec { - name = "hex2nix"; - version = "0.0.6-42d7b2ec"; - - releaseType = "escript"; - - checkouts = fetchRebar3Deps { - inherit name version; - src = "${src}/rebar.config"; - sha256 = "0z6v1f6hagl3qyj97frqr2ww3adrwgfwdyb2zshaai0d3xchg3ly"; - }; - - src = fetchFromGitHub { - owner = "erlang-nix"; - repo = "hex2nix"; - rev = "42d7b2ec64f61f21061066b192003cf7f460bf43"; - sha256 = "0ac1fmckvid5077djg3ajycxn7gwbf7pdk1knhfp8yva3c5qq58r"; - }; -} diff --git a/pkgs/development/tools/godot/default.nix b/pkgs/development/tools/godot/default.nix index 20c031ead4a..e31d27f710b 100644 --- a/pkgs/development/tools/godot/default.nix +++ b/pkgs/development/tools/godot/default.nix @@ -10,13 +10,13 @@ let }; in stdenv.mkDerivation rec { pname = "godot"; - version = "3.1.1"; + version = "3.1.2"; src = fetchFromGitHub { owner = "godotengine"; repo = "godot"; rev = "${version}-stable"; - sha256 = "0lplkwgshh0x7r1daai9gflzwjnp3yfx4724h1myvidaz234v2wh"; + sha256 = "12305wj2i4067jc50l8r0wmb7zjcna24fli8vb8kiaild0jrlip6"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/tools/hcloud/default.nix b/pkgs/development/tools/hcloud/default.nix index 9b64dc8a3b1..480456ff21d 100644 --- a/pkgs/development/tools/hcloud/default.nix +++ b/pkgs/development/tools/hcloud/default.nix @@ -1,8 +1,8 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoModule, fetchFromGitHub }: -buildGoPackage rec { +buildGoModule rec { pname = "hcloud"; - version = "1.13.0"; + version = "1.14.0"; goPackagePath = "github.com/hetznercloud/cli"; @@ -10,24 +10,24 @@ buildGoPackage rec { owner = "hetznercloud"; repo = "cli"; rev = "v${version}"; - sha256 = "1bin9gcmmj3i6a11rv7czvnryl8bv7cjz3pi2cqx8baycg3hia5j"; + sha256 = "167x64ni4xm0d9b02gy8zvc8knhsvb1c9jhysw7svi7iaw5f2ds5"; }; - goDeps = ./deps.nix; + modSha256 = "1g81szkrkxmv51l78v0d39i8dvrrdhf8wh38rwxvnay3iajgrnqk"; buildFlagsArray = [ "-ldflags=" "-w -X github.com/hetznercloud/cli/cli.Version=${version}" ]; postInstall = '' mkdir -p \ - $bin/etc/bash_completion.d \ - $bin/share/zsh/vendor-completions + $out/etc/bash_completion.d \ + $out/share/zsh/vendor-completions # Add bash completions - $bin/bin/hcloud completion bash > "$bin/etc/bash_completion.d/hcloud" + $out/bin/hcloud completion bash > "$out/etc/bash_completion.d/hcloud" # Add zsh completions - echo "#compdef hcloud" > "$bin/share/zsh/vendor-completions/_hcloud" - $bin/bin/hcloud completion zsh >> "$bin/share/zsh/vendor-completions/_hcloud" + echo "#compdef hcloud" > "$out/share/zsh/vendor-completions/_hcloud" + $out/bin/hcloud completion zsh >> "$out/share/zsh/vendor-completions/_hcloud" ''; meta = { diff --git a/pkgs/development/tools/hcloud/deps.nix b/pkgs/development/tools/hcloud/deps.nix deleted file mode 100644 index 01bde6f302a..00000000000 --- a/pkgs/development/tools/hcloud/deps.nix +++ /dev/null @@ -1,111 +0,0 @@ -# This file was generated by https://github.com/kamilchm/go2nix v1.3.0 -[ - { - goPackagePath = "github.com/dustin/go-humanize"; - fetch = { - type = "git"; - url = "https://github.com/dustin/go-humanize"; - rev = "9f541cc9db5d55bce703bd99987c9d5cb8eea45e"; - sha256 = "1kqf1kavdyvjk7f8kx62pnm7fbypn9z1vbf8v2qdh3y7z7a0cbl3"; - }; - } - { - goPackagePath = "github.com/fatih/structs"; - fetch = { - type = "git"; - url = "https://github.com/fatih/structs"; - rev = "878a968ab22548362a09bdb3322f98b00f470d46"; - sha256 = "15nkffa8ylr5kkv52gyry675l8bzv3c0xx39j0fzz0vp2kcjyy8x"; - }; - } - { - goPackagePath = "github.com/gosuri/uilive"; - fetch = { - type = "git"; - url = "https://github.com/gosuri/uilive"; - rev = "4512d98b127f3f3a1b7c3cf1104969fdd17b31d9"; - sha256 = "12n3kjgdzrb50jhkcb2ac3437mdhxh33zrcz7mi4gpji20jz4ai7"; - }; - } - { - goPackagePath = "github.com/gosuri/uiprogress"; - fetch = { - type = "git"; - url = "https://github.com/gosuri/uiprogress"; - rev = "4442fea128d2bc91caf276b08518bdf4582561c8"; - sha256 = "1g6xjknm0981h3b1drbvm6vd66hiah1cylpdck9cqd18kyxd6bpd"; - }; - } - { - goPackagePath = "github.com/hetznercloud/cli"; - fetch = { - type = "git"; - url = "https://github.com/hetznercloud/cli"; - rev = "d6ec656f964aac4382d9c724edd27a8608e7b354"; - sha256 = "0ng7hihzplwyz4sdipms4m9qq2bcj92qczzd5adhm6da851jxpbc"; - }; - } - { - goPackagePath = "github.com/hetznercloud/hcloud-go"; - fetch = { - type = "git"; - url = "https://github.com/hetznercloud/hcloud-go"; - rev = "70b166c92266125ee6a621dcc6089023a5f8d055"; - sha256 = "02hh214qk8qrhl9rpaywv2z5jpkzx3y2j8gv5xmdprdamrjwwlbc"; - }; - } - { - goPackagePath = "github.com/pelletier/go-toml"; - fetch = { - type = "git"; - url = "https://github.com/pelletier/go-toml"; - rev = "84da2c4a25c585816f2c4211b699228d111d18ab"; - sha256 = "1zh5kswqckz7aaz4kpd1kxbxnlhlmprba1ghkl742x6mbv3w08bm"; - }; - } - { - goPackagePath = "github.com/spf13/cobra"; - fetch = { - type = "git"; - url = "https://github.com/spf13/cobra"; - rev = "1c9c46d5c1cc2aaebdd1898c0680e85e8a44b36d"; - sha256 = "0mxliq4gfvdazga8mapc2sazi915rz1h6prnark9hwbbsz0xn0r3"; - }; - } - { - goPackagePath = "github.com/spf13/pflag"; - fetch = { - type = "git"; - url = "https://github.com/spf13/pflag"; - rev = "24fa6976df40757dce6aea913e7b81ade90530e1"; - sha256 = "0rf6prz6gl0l1b3wijzdgq887cdwigvzxvz6gqbm5l8pkq3fx1m9"; - }; - } - { - goPackagePath = "github.com/thcyron/uiprogress"; - fetch = { - type = "git"; - url = "https://github.com/thcyron/uiprogress"; - rev = "25e98ffb0e98b5192b475d8f2fd78083bfe9a67e"; - sha256 = "1avb0jykn3qbjrvhc8i50ahisf9rsfy74ysrwfqbqqkpvhdxv12i"; - }; - } - { - goPackagePath = "golang.org/x/crypto"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/crypto"; - rev = "4def268fd1a49955bfb3dda92fe3db4f924f2285"; - sha256 = "1bfsnari529gw34cz0zqk3d9mrkcj1ay35kangri8kbgll0ss5a6"; - }; - } - { - goPackagePath = "golang.org/x/sys"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/sys"; - rev = "fc99dfbffb4e5ed5758a37e31dd861afe285406b"; - sha256 = "186x8bg926qb9sprs5zpd97xzvvhc2si7q1nhvyg12r5cd6v7zjd"; - }; - } -] diff --git a/pkgs/development/tools/jazzy/Gemfile.lock b/pkgs/development/tools/jazzy/Gemfile.lock index 2b27f9eaa96..907b095629f 100644 --- a/pkgs/development/tools/jazzy/Gemfile.lock +++ b/pkgs/development/tools/jazzy/Gemfile.lock @@ -1,7 +1,7 @@ GEM remote: https://rubygems.org/ specs: - CFPropertyList (3.0.1) + CFPropertyList (3.0.2) activesupport (4.2.11.1) i18n (~> 0.7) minitest (~> 5.1) @@ -38,7 +38,7 @@ GEM fuzzy_match (~> 2.0.4) nap (~> 1.0) cocoapods-deintegrate (1.0.4) - cocoapods-downloader (1.2.2) + cocoapods-downloader (1.3.0) cocoapods-plugins (1.0.0) nap cocoapods-search (1.0.0) @@ -50,14 +50,14 @@ GEM colored2 (3.1.2) concurrent-ruby (1.1.5) escape (0.0.4) - ffi (1.11.2) + ffi (1.11.3) fourflusher (2.3.1) fuzzy_match (2.0.4) gh_inspector (1.1.3) httpclient (2.8.3) i18n (0.9.5) concurrent-ruby (~> 1.0) - jazzy (0.12.0) + jazzy (0.13.0) cocoapods (~> 1.5) mustache (~> 1.1) open4 @@ -70,7 +70,7 @@ GEM liferaft (0.0.6) minitest (5.13.0) molinillo (0.6.6) - mustache (1.1.0) + mustache (1.1.1) nanaimo (0.2.6) nap (1.1.0) netrc (0.11.0) diff --git a/pkgs/development/tools/jazzy/gemset.nix b/pkgs/development/tools/jazzy/gemset.nix index 8c1a65d62fb..2073991e787 100644 --- a/pkgs/development/tools/jazzy/gemset.nix +++ b/pkgs/development/tools/jazzy/gemset.nix @@ -36,10 +36,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0fr8sdzs2q1969zqh790w223hjidlwx4hfm4c91gj0va5j5pv3n8"; + sha256 = "1825ll26p28swjiw8n3x2pnh5ygsmg83spf82fnzcjn2p87vc5lf"; type = "gem"; }; - version = "3.0.1"; + version = "3.0.2"; }; claide = { groups = ["default"]; @@ -88,10 +88,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "09fd4zaqkz8vz3djplacngcs4n0j6j956wgq43s1y6bwl0zyjmd3"; + sha256 = "08vn0pgcyn6w6fq5xjd7szv2h9s5rzl17kyidnd7fl5qdmzc9c54"; type = "gem"; }; - version = "1.2.2"; + version = "1.3.0"; }; cocoapods-plugins = { dependencies = ["nap"]; @@ -170,10 +170,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0cbads5da12lb3j0mg2hjrd57s5qkkairxh2y6r9bqyblb5b8xbw"; + sha256 = "10ay35dm0lkcqprsiya6q2kwvyid884102ryipr4vrk790yfp8kd"; type = "gem"; }; - version = "1.11.2"; + version = "1.11.3"; }; fourflusher = { groups = ["default"]; @@ -230,10 +230,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0a2pc4qlf531k85lp7kbwz4rqvs4lgdndmvv676x3qvm181p8blc"; + sha256 = "0d903aii1y54xb348cyj7rps7xa3in41w2qjh6yvgkbxbabnc616"; type = "gem"; }; - version = "0.12.0"; + version = "0.13.0"; }; json = { groups = ["default"]; @@ -278,10 +278,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1698xpwxmfvj39ii5vv8a4aka54p3fpk5i4rf8z9lfxrh4948rbk"; + sha256 = "1l0p4wx15mi3wnamfv92ipkia4nsx8qi132c6g51jfdma3fiz2ch"; type = "gem"; }; - version = "1.1.0"; + version = "1.1.1"; }; nanaimo = { groups = ["default"]; diff --git a/pkgs/development/tools/kind/default.nix b/pkgs/development/tools/kind/default.nix index 4ac57d0e850..411b6a261d6 100644 --- a/pkgs/development/tools/kind/default.nix +++ b/pkgs/development/tools/kind/default.nix @@ -1,22 +1,29 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoPackage, fetchFromGitHub, installShellFiles }: with stdenv.lib; buildGoPackage rec { pname = "kind"; - version = "0.5.1"; + version = "0.6.1"; src = fetchFromGitHub { rev = "v${version}"; owner = "kubernetes-sigs"; repo = "kind"; - sha256 = "12bjvma98dlxybqs43dggnd6cihxm18xz68a5jw8dzf0cg738gs8"; + sha256 = "165nwkhsa12z043rvkdf977jndhp82x7sccqfy75pkx99mzz43r2"; }; goDeps = ./deps.nix; goPackagePath = "sigs.k8s.io/kind"; subPackages = [ "." ]; + nativeBuildInputs = [ installShellFiles ]; + postInstall = '' + $bin/bin/kind completion bash > kind.bash + $bin/bin/kind completion zsh > kind.zsh + installShellCompletion kind.{bash,zsh} + ''; + meta = { description = "Kubernetes IN Docker - local clusters for testing Kubernetes"; homepage = https://github.com/kubernetes-sigs/kind; diff --git a/pkgs/development/tools/kind/deps.nix b/pkgs/development/tools/kind/deps.nix index c5557c2aa49..99a73291d71 100644 --- a/pkgs/development/tools/kind/deps.nix +++ b/pkgs/development/tools/kind/deps.nix @@ -1,6 +1,15 @@ # file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix) [ { + goPackagePath = "github.com/BurntSushi/toml"; + fetch = { + type = "git"; + url = "https://github.com/BurntSushi/toml"; + rev = "v0.3.1"; + sha256 = "1fjdwwfzyzllgiwydknf1pwjvy49qxfsczqx5gz3y0izs7as99j6"; + }; + } + { goPackagePath = "github.com/NYTimes/gziphandler"; fetch = { type = "git"; @@ -14,8 +23,8 @@ fetch = { type = "git"; url = "https://github.com/PuerkitoBio/purell"; - rev = "v1.1.1"; - sha256 = "0c525frsxmalrn55hzzsxy17ng8avkd40ga0wxfw9haxsdjgqdqy"; + rev = "v1.0.0"; + sha256 = "1qhsy1nm96b9kb63svkvkqmmw15xg6irwcysisxdgzk64adfwqv1"; }; } { @@ -23,8 +32,62 @@ fetch = { type = "git"; url = "https://github.com/PuerkitoBio/urlesc"; - rev = "de5bf2ad4578"; - sha256 = "0n0srpqwbaan1wrhh2b7ysz543pjs1xw2rghvqyffg9l0g8kzgcw"; + rev = "5bd2802263f2"; + sha256 = "15y5r3asvm7196m3nza5xvdvlc2k11p6lfs6hi917hl7r9vgi6mp"; + }; + } + { + goPackagePath = "github.com/alessio/shellescape"; + fetch = { + type = "git"; + url = "https://github.com/alessio/shellescape"; + rev = "b115ca0f9053"; + sha256 = "0z4jq94yn0jjj56bzrpdazb3pv1jg0r7z0ikq3gjaa51h423wk4z"; + }; + } + { + goPackagePath = "github.com/armon/consul-api"; + fetch = { + type = "git"; + url = "https://github.com/armon/consul-api"; + rev = "eb2c6b5be1b6"; + sha256 = "1j6fdr1sg36qy4n4xjl7brq739fpm5npq98cmvklzjc9qrx98nk9"; + }; + } + { + goPackagePath = "github.com/coreos/etcd"; + fetch = { + type = "git"; + url = "https://github.com/coreos/etcd"; + rev = "v3.3.10"; + sha256 = "1x2ii1hj8jraba8rbxz6dmc03y3sjxdnzipdvg6fywnlq1f3l3wl"; + }; + } + { + goPackagePath = "github.com/coreos/go-etcd"; + fetch = { + type = "git"; + url = "https://github.com/coreos/go-etcd"; + rev = "v2.0.0"; + sha256 = "1xb34hzaa1lkbq5vkzy9vcz6gqwj7hp6cdbvyack2bf28dwn33jj"; + }; + } + { + goPackagePath = "github.com/coreos/go-semver"; + fetch = { + type = "git"; + url = "https://github.com/coreos/go-semver"; + rev = "v0.2.0"; + sha256 = "1gghi5bnqj50hfxhqc1cxmynqmh2yk9ii7ab9gsm75y5cp94ymk0"; + }; + } + { + goPackagePath = "github.com/cpuguy83/go-md2man"; + fetch = { + type = "git"; + url = "https://github.com/cpuguy83/go-md2man"; + rev = "v1.0.10"; + sha256 = "1bqkf2bvy1dns9zd24k81mh2p1zxsx2nhq5cj8dz2vgkv1xkh60i"; }; } { @@ -37,12 +100,30 @@ }; } { + goPackagePath = "github.com/docker/spdystream"; + fetch = { + type = "git"; + url = "https://github.com/docker/spdystream"; + rev = "449fdfce4d96"; + sha256 = "1412cpiis971iq1kxrirzirhj2708ispjh0x0dh879b66x8507sl"; + }; + } + { + goPackagePath = "github.com/elazarl/goproxy"; + fetch = { + type = "git"; + url = "https://github.com/elazarl/goproxy"; + rev = "c4fc26588b6e"; + sha256 = "1s3v02px61a3hmvb47rqk598z5visayxq46k3c8dcrayhhngv2fw"; + }; + } + { goPackagePath = "github.com/emicklei/go-restful"; fetch = { type = "git"; url = "https://github.com/emicklei/go-restful"; - rev = "v2.9.6"; - sha256 = "0dgjld5240xhz45rj929ffm452n931qfw3fx8x99vhlnii9qrwz2"; + rev = "ff4f55a20633"; + sha256 = "1v5lj5142abz3gvbygp6xghpdx4ps2lwswl8559ivaidahwnc21c"; }; } { @@ -73,12 +154,21 @@ }; } { + goPackagePath = "github.com/go-logr/logr"; + fetch = { + type = "git"; + url = "https://github.com/go-logr/logr"; + rev = "v0.1.0"; + sha256 = "0fhijjhxz4n2j5i24ckzv8r9kri3v44jdyklgbqjfq0xm7izqg14"; + }; + } + { goPackagePath = "github.com/go-openapi/jsonpointer"; fetch = { type = "git"; url = "https://github.com/go-openapi/jsonpointer"; - rev = "v0.19.2"; - sha256 = "1s3cqf4svrbygvvpvi7hf122szsgihas52vqh0bba3avf4w03g9n"; + rev = "46af16f9f7b1"; + sha256 = "0w0fphmdycjzbsm1vppdcjc9aqinkcdzcq3pxikdvdqh5p791gsc"; }; } { @@ -86,8 +176,8 @@ fetch = { type = "git"; url = "https://github.com/go-openapi/jsonreference"; - rev = "v0.19.2"; - sha256 = "0v933yvcwyzzlpdxwb9204ki7lls2rwfd96ww2i901ndvz37kdf8"; + rev = "13c6e3589ad9"; + sha256 = "1fh4xcl9ijww4bdq656sx981d57w2c9zx5148jsxlsg4bsvxmwis"; }; } { @@ -95,8 +185,8 @@ fetch = { type = "git"; url = "https://github.com/go-openapi/spec"; - rev = "v0.19.2"; - sha256 = "1r2my46qc85fp1j4lbddmd6c1n0am9bq1wyqsnw7x8raiznqxp5l"; + rev = "6aced65f8501"; + sha256 = "0yf0nw7167yjpiqrikns5djarjpf2r07q6xnq9xb1cfsc4m7ynm4"; }; } { @@ -104,8 +194,8 @@ fetch = { type = "git"; url = "https://github.com/go-openapi/swag"; - rev = "v0.19.2"; - sha256 = "1mlxlajx2p9wjm72rmqjrx5g49q2sn04y45s3nrykkf6jqlq1v4z"; + rev = "1d0bd113de87"; + sha256 = "0fmk42chj20679n87n6sig3czs25lavyj6w208000n6kccv1ns3c"; }; } { @@ -113,8 +203,17 @@ fetch = { type = "git"; url = "https://github.com/gogo/protobuf"; - rev = "v1.2.1"; - sha256 = "06yqa6h0kw3gr5pc3qmas7f7435a96zf7iw7p0l00r2hqf6fqq6m"; + rev = "65acae22fc9d"; + sha256 = "0700alky9z0g9akhrzn20wf4jr1600d0clhs32sm8chnlbvidy46"; + }; + } + { + goPackagePath = "github.com/golang/groupcache"; + fetch = { + type = "git"; + url = "https://github.com/golang/groupcache"; + rev = "02826c3e7903"; + sha256 = "0w46bsllddfij66nrg8jbfjsr54birvfww8a2fj9fmgyig5syn2x"; }; } { @@ -122,8 +221,17 @@ fetch = { type = "git"; url = "https://github.com/golang/protobuf"; - rev = "v1.3.1"; - sha256 = "15am4s4646qy6iv0g3kkqq52rzykqjhm4bf08dk0fy2r58knpsyl"; + rev = "v1.3.2"; + sha256 = "1k1wb4zr0qbwgpvz9q5ws9zhlal8hq7dmq62pwxxriksayl6hzym"; + }; + } + { + goPackagePath = "github.com/google/go-cmp"; + fetch = { + type = "git"; + url = "https://github.com/google/go-cmp"; + rev = "v0.3.0"; + sha256 = "1hyxx3434zshl2m9ja78gwlkg1rx9yl6diqa7dnjb31xz5x4gbjj"; }; } { @@ -149,8 +257,26 @@ fetch = { type = "git"; url = "https://github.com/googleapis/gnostic"; - rev = "v0.3.0"; - sha256 = "0bnxpkxw9kmwm27rxhgv3i0jn362wp9whmqrv0lb77874s5iz2lc"; + rev = "0c5108395e2d"; + sha256 = "0jf3cp5clli88gpjf24r6wxbkvngnc1kf59d4cgjczsn2wasvsfc"; + }; + } + { + goPackagePath = "github.com/hashicorp/golang-lru"; + fetch = { + type = "git"; + url = "https://github.com/hashicorp/golang-lru"; + rev = "v0.5.1"; + sha256 = "13f870cvk161bzjj6x41l45r5x9i1z9r2ymwmvm7768kg08zznpy"; + }; + } + { + goPackagePath = "github.com/hashicorp/hcl"; + fetch = { + type = "git"; + url = "https://github.com/hashicorp/hcl"; + rev = "v1.0.0"; + sha256 = "0q6ml0qqs0yil76mpn4mdx4lp94id8vbv575qm60jzl1ijcl5i66"; }; } { @@ -176,8 +302,8 @@ fetch = { type = "git"; url = "https://github.com/json-iterator/go"; - rev = "v1.1.6"; - sha256 = "08caswxvdn7nvaqyj5kyny6ghpygandlbw9vxdj7l5vkp7q0s43r"; + rev = "v1.1.8"; + sha256 = "1kbp9fj6fxfql0ir59zb6v68l4bpwlmk76xm8vaikw1hp6y9bcss"; }; } { @@ -185,8 +311,8 @@ fetch = { type = "git"; url = "https://github.com/kisielk/errcheck"; - rev = "v1.1.0"; - sha256 = "19vd4rxmqbk5lpiav3pf7df3yjlz0l0dwx9mn0gjq5f998iyhy6y"; + rev = "v1.2.0"; + sha256 = "0am6g10ipdxw84byscm7shda654882wjcbinq5c4696m6mhi2qrd"; }; } { @@ -199,15 +325,6 @@ }; } { - goPackagePath = "github.com/konsorten/go-windows-terminal-sequences"; - fetch = { - type = "git"; - url = "https://github.com/konsorten/go-windows-terminal-sequences"; - rev = "v1.0.1"; - sha256 = "1lchgf27n276vma6iyxa0v1xds68n2g8lih5lavqnx5x6q5pw2ip"; - }; - } - { goPackagePath = "github.com/kr/pretty"; fetch = { type = "git"; @@ -221,8 +338,8 @@ fetch = { type = "git"; url = "https://github.com/kr/pty"; - rev = "v1.1.5"; - sha256 = "1bpq77b90z72cv9h66dvxsg2j197ylpgcps23xsjfbs752bykfw1"; + rev = "v1.1.1"; + sha256 = "0383f0mb9kqjvncqrfpidsf8y6ns5zlrc91c6a74xpyxjwvzl2y6"; }; } { @@ -235,12 +352,48 @@ }; } { + goPackagePath = "github.com/magiconair/properties"; + fetch = { + type = "git"; + url = "https://github.com/magiconair/properties"; + rev = "v1.8.0"; + sha256 = "1a10362wv8a8qwb818wygn2z48lgzch940hvpv81hv8gc747ajxn"; + }; + } + { goPackagePath = "github.com/mailru/easyjson"; fetch = { type = "git"; url = "https://github.com/mailru/easyjson"; - rev = "da37f6c1e481"; - sha256 = "0yhamddd1jyqslp0hm5g07ki82sp52f0idfiqylx6fm24fin74gh"; + rev = "d5b7844b561a"; + sha256 = "1g84l4wns28xjpn6nl1g33dcj3sfgxlkqqsa6w8fbq2kwyd50xka"; + }; + } + { + goPackagePath = "github.com/mattn/go-isatty"; + fetch = { + type = "git"; + url = "https://github.com/mattn/go-isatty"; + rev = "v0.0.10"; + sha256 = "0jf4hwfwd2cpxrlyv0jzcia809q2bjw7y1m3ciaj2s8lj2jqyf6r"; + }; + } + { + goPackagePath = "github.com/mitchellh/go-homedir"; + fetch = { + type = "git"; + url = "https://github.com/mitchellh/go-homedir"; + rev = "v1.1.0"; + sha256 = "0ydzkipf28hwj2bfxqmwlww47khyk6d152xax4bnyh60f4lq3nx1"; + }; + } + { + goPackagePath = "github.com/mitchellh/mapstructure"; + fetch = { + type = "git"; + url = "https://github.com/mitchellh/mapstructure"; + rev = "v1.1.2"; + sha256 = "03bpv28jz9zhn4947saqwi328ydj7f6g6pf1m2d4m5zdh5jlfkrr"; }; } { @@ -271,12 +424,21 @@ }; } { + goPackagePath = "github.com/mxk/go-flowrate"; + fetch = { + type = "git"; + url = "https://github.com/mxk/go-flowrate"; + rev = "cca7078d478f"; + sha256 = "0zqs39923ja0yypdmiqk6x8pgmfs3ms5x5sl1dqv9z6zyx2xy541"; + }; + } + { goPackagePath = "github.com/onsi/ginkgo"; fetch = { type = "git"; url = "https://github.com/onsi/ginkgo"; - rev = "v1.8.0"; - sha256 = "1326s5fxgasdpz1qqwrw4n5p3k0vz44msnyz14knrhlw5l97lx33"; + rev = "v1.10.1"; + sha256 = "033a42h1wzmji57p86igg9whvsbp6nvfdsypskw738ys903n3z4d"; }; } { @@ -284,8 +446,17 @@ fetch = { type = "git"; url = "https://github.com/onsi/gomega"; - rev = "v1.5.0"; - sha256 = "1n7i4hksdgv410m43v2sw14bl5vy59dkp6nlw5l76nibbh37syr9"; + rev = "v1.7.0"; + sha256 = "09j6wq425wgzzsbwm9ckhfgl2capv3yyqbrf45qyrjwkzm49i02y"; + }; + } + { + goPackagePath = "github.com/pelletier/go-toml"; + fetch = { + type = "git"; + url = "https://github.com/pelletier/go-toml"; + rev = "v1.2.0"; + sha256 = "1fjzpcjng60mc3a4b2ql5a00d5gah84wj740dabv9kq67mpg8fxy"; }; } { @@ -307,12 +478,30 @@ }; } { - goPackagePath = "github.com/sirupsen/logrus"; + goPackagePath = "github.com/russross/blackfriday"; + fetch = { + type = "git"; + url = "https://github.com/russross/blackfriday"; + rev = "v1.5.2"; + sha256 = "0jzbfzcywqcrnym4gxlz6nphmm1grg6wsl4f0r9x384rn83wkj7c"; + }; + } + { + goPackagePath = "github.com/spf13/afero"; fetch = { type = "git"; - url = "https://github.com/sirupsen/logrus"; - rev = "v1.4.1"; - sha256 = "1m7ny9jkb98cxqhsp13xa5hnqh1s9f25x04q6arsala4zswsw33c"; + url = "https://github.com/spf13/afero"; + rev = "v1.1.2"; + sha256 = "0miv4faf5ihjfifb1zv6aia6f6ik7h1s4954kcb8n6ixzhx9ck6k"; + }; + } + { + goPackagePath = "github.com/spf13/cast"; + fetch = { + type = "git"; + url = "https://github.com/spf13/cast"; + rev = "v1.3.0"; + sha256 = "0xq1ffqj8y8h7dcnm0m9lfrh0ga7pssnn2c1dnr09chqbpn4bdc5"; }; } { @@ -320,8 +509,17 @@ fetch = { type = "git"; url = "https://github.com/spf13/cobra"; - rev = "v0.0.3"; - sha256 = "1q1nsx05svyv9fv3fy6xv6gs9ffimkyzsfm49flvl3wnvf1ncrkd"; + rev = "v0.0.5"; + sha256 = "0z4x8js65mhwg1gf6sa865pdxfgn45c3av9xlcc1l3xjvcnx32v2"; + }; + } + { + goPackagePath = "github.com/spf13/jwalterweatherman"; + fetch = { + type = "git"; + url = "https://github.com/spf13/jwalterweatherman"; + rev = "v1.0.0"; + sha256 = "093fmmvavv84pv4q84hav7ph3fmrq87bvspjj899q0qsx37yvdr8"; }; } { @@ -329,8 +527,17 @@ fetch = { type = "git"; url = "https://github.com/spf13/pflag"; - rev = "v1.0.3"; - sha256 = "1cj3cjm7d3zk0mf1xdybh0jywkbbw7a6yr3y22x9sis31scprswd"; + rev = "v1.0.5"; + sha256 = "0gpmacngd0gpslnbkzi263f5ishigzgh6pbdv9hp092rnjl4nd31"; + }; + } + { + goPackagePath = "github.com/spf13/viper"; + fetch = { + type = "git"; + url = "https://github.com/spf13/viper"; + rev = "v1.3.2"; + sha256 = "1829hvf805kda65l59r17wvid7y0vr390s23zfhf4w7vdb4wp3zh"; }; } { @@ -338,8 +545,8 @@ fetch = { type = "git"; url = "https://github.com/stretchr/objx"; - rev = "v0.2.0"; - sha256 = "0pcdvakxgddaiwcdj73ra4da05a3q4cgwbpm2w75ycq4kzv8ij8k"; + rev = "v0.1.0"; + sha256 = "19ynspzjdynbi85xw06mh8ad5j0qa1vryvxjgvbnyrr8rbm4vd8w"; }; } { @@ -347,8 +554,26 @@ fetch = { type = "git"; url = "https://github.com/stretchr/testify"; - rev = "v1.3.0"; - sha256 = "0wjchp2c8xbgcbbq32w3kvblk6q6yn533g78nxl6iskq6y95lxsy"; + rev = "v1.4.0"; + sha256 = "187i5g88sxfy4vxpm7dw1gwv29pa2qaq475lxrdh5livh69wqfjb"; + }; + } + { + goPackagePath = "github.com/ugorji/go"; + fetch = { + type = "git"; + url = "https://github.com/ugorji/go"; + rev = "d75b2dcb6bc8"; + sha256 = "0di1k35gpq9bp958ywranpbskx2vdwlb38s22vl9rybm3wa5g3ps"; + }; + } + { + goPackagePath = "github.com/xordataexchange/crypt"; + fetch = { + type = "git"; + url = "https://github.com/xordataexchange/crypt"; + rev = "b2862e3d0a77"; + sha256 = "04q3856anpzl4gdfgmg7pbp9cx231nkz3ymq2xp27rnmmwhfxr8y"; }; } { @@ -356,8 +581,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/crypto"; - rev = "5c40567a22f8"; - sha256 = "17g8fb9vy2sqq8vgz8jdvf6c6d2290gm2qs0i4yzsd86mgn4dlrg"; + rev = "c2843e01d9a2"; + sha256 = "01xgxbj5r79nmisdvpq48zfy8pzaaj90bn6ngd4nf33j9ar1dp8r"; }; } { @@ -365,8 +590,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/net"; - rev = "3b0461eec859"; - sha256 = "0l00c8l0a8xnv6qdpwfzxxsr58jggacgzdrwiprrfx2xqm37b6d5"; + rev = "13f9640d40b9"; + sha256 = "1ba2767lvklnmfvb9jkwvd4m7z6326gaiz3rgylh795g88hy34g1"; }; } { @@ -374,8 +599,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/sync"; - rev = "112230192c58"; - sha256 = "05i2k43j2d0llq768hg5pf3hb2yhfzp9la1w5wp0rsnnzblr0lfn"; + rev = "1d60e4601c6f"; + sha256 = "046jlanz2lkxq1r57x9bl6s4cvfqaic6p2xybsj8mq1120jv4rs6"; }; } { @@ -383,8 +608,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/sys"; - rev = "d432491b9138"; - sha256 = "0ijq720jr76yxdd6mh1rdpxh7q93w6149paclb4g39vhr84hfiv8"; + rev = "c1f44814a5cd"; + sha256 = "1a6hb4326hk8hvcbs0pqypalsxzqc8xasnglrrwd6ai0njgh18pg"; }; } { @@ -401,8 +626,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/tools"; - rev = "5aca471b1d59"; - sha256 = "1i4h3q83w4y9s065w0wnnnwlssy69jbrj08k47ppsa8dnv85kyrf"; + rev = "6c7e314b6563"; + sha256 = "1m1n6r8v6mrlh0yvlz3qxz4s7jc7nis0zf3dfl1i6hqh5xblkwnw"; }; } { @@ -446,17 +671,17 @@ fetch = { type = "git"; url = "https://gopkg.in/yaml.v2"; - rev = "v2.2.2"; - sha256 = "01wj12jzsdqlnidpyjssmj0r4yavlqy7dwrg7adqd8dicjc4ncsa"; + rev = "v2.2.5"; + sha256 = "08smz8dfyxp02ha74my9iszqa5qzgl3ksi28ilyp8lqipssiq6fg"; }; } { - goPackagePath = "k8s.io/api"; + goPackagePath = "gopkg.in/yaml.v3"; fetch = { type = "git"; - url = "https://github.com/kubernetes/api"; - rev = "6e4e0e4f393b"; - sha256 = "0y7nxxywq2qx74a5vsg0h2jkfj879wbv6bjran12401fv0vsdlp1"; + url = "https://gopkg.in/yaml.v3"; + rev = "e228e37189d3"; + sha256 = "06sc63lqhkqjh188md1cywvscxq40cqgmdl8ccd3q891b1xpajl4"; }; } { @@ -464,17 +689,8 @@ fetch = { type = "git"; url = "https://github.com/kubernetes/apimachinery"; - rev = "6a84e37a896d"; - sha256 = "1ys06ixidvpcj9sgk0c2i5vsz11gg3h8xcpc9kqxfsik36cw1akk"; - }; - } - { - goPackagePath = "k8s.io/client-go"; - fetch = { - type = "git"; - url = "https://github.com/kubernetes/client-go"; - rev = "v11.0.0"; - sha256 = "006007k55b5q95fa0vih4bprwvx5sk4a5chvsn46baqa5znphyn1"; + rev = "v0.17.0"; + sha256 = "1418y3p2fx7zsf1anpwcma1fqnaymal12d6x33j600jf1y0j9g8i"; }; } { @@ -491,8 +707,8 @@ fetch = { type = "git"; url = "https://github.com/kubernetes/klog"; - rev = "v0.3.3"; - sha256 = "1gk1jhhyzsqcb4wnb02hkp8fwmk3ac924yzk87hfc6sgz43jplpn"; + rev = "v1.0.0"; + sha256 = "1cgannfmldcrcksb2wqdn2b5qabqyxl9r25w9y4qbljw24hhnlvn"; }; } { @@ -500,17 +716,8 @@ fetch = { type = "git"; url = "https://github.com/kubernetes/kube-openapi"; - rev = "db7b694dc208"; - sha256 = "11pmxz6if6gphspyyjqrphwclg02mgnp30mn1i0lr8r21d64m148"; - }; - } - { - goPackagePath = "sigs.k8s.io/kustomize/v3"; - fetch = { - type = "git"; - url = "https://github.com/kubernetes-sigs/kustomize"; - rev = "4b67a6de1296"; - sha256 = "1qi5swzs3qix9mimrc660hxh9qgcrbcw49z4w27hdv27xl5fa0rd"; + rev = "30be4d16710a"; + sha256 = "13pksn2xzyhrz569zihqy78y9ckn4sf4f4x31w1czfwbs87n00gf"; }; } { diff --git a/pkgs/development/tools/kubeprompt/default.nix b/pkgs/development/tools/kubeprompt/default.nix new file mode 100644 index 00000000000..7c6f3f3396c --- /dev/null +++ b/pkgs/development/tools/kubeprompt/default.nix @@ -0,0 +1,31 @@ +{ stdenv, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "kubeprompt"; + version = "0.3.0"; + + src = fetchFromGitHub { + owner = "jlesquembre"; + repo = pname; + rev = version; + sha256 = "1a0xi31bd7n2zrx2z4srhvixlbj028h63dlrjzqxgmgn2w6akbz2"; + }; + + preBuild = '' + export buildFlagsArray+=( + "-ldflags= + -w -s + -X ${goPackagePath}/pkg/version.Version=${version}") + ''; + + goPackagePath = "github.com/jlesquembre/kubeprompt"; + modSha256 = "0rbpdk2dixywn3wcdgz48f3xw3b7fk8xh7mrlx27wz7fq5wj9v8f"; + + meta = with stdenv.lib; { + description = "Kubernetes prompt"; + homepage = "https://github.com/jlesquembre/kubeprompt"; + license = licenses.epl20; + maintainers = with maintainers; [ jlesquembre ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/tools/misc/direvent/default.nix b/pkgs/development/tools/misc/direvent/default.nix new file mode 100644 index 00000000000..0ae1884646d --- /dev/null +++ b/pkgs/development/tools/misc/direvent/default.nix @@ -0,0 +1,21 @@ +{ stdenv +, fetchurl +}: + +stdenv.mkDerivation rec { + name = "direvent-${version}"; + version = "5.2"; + + src = fetchurl { + url = "mirror://gnu/direvent/${name}.tar.gz"; + sha256 = "0m9vi01b1km0cpknflyzsjnknbava0s1n6393b2bpjwyvb6j5613"; + }; + + meta = with stdenv.lib; { + description = "Directory event monitoring daemon"; + homepage = "https://www.gnu.org.ua/software/direvent/"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ puffnfresh ]; + }; +} diff --git a/pkgs/development/tools/misc/hydra/default.nix b/pkgs/development/tools/misc/hydra/default.nix index 4a65d088834..f8b04af3f97 100644 --- a/pkgs/development/tools/misc/hydra/default.nix +++ b/pkgs/development/tools/misc/hydra/default.nix @@ -15,7 +15,7 @@ else let perlDeps = buildEnv { name = "hydra-perl-deps"; - paths = with perlPackages; + paths = with perlPackages; lib.closePropagation [ ModulePluggable CatalystActionREST CatalystAuthenticationStoreDBIxClass diff --git a/pkgs/development/tools/misc/pwndbg/default.nix b/pkgs/development/tools/misc/pwndbg/default.nix index 9af43e4b747..449d9ee0984 100644 --- a/pkgs/development/tools/misc/pwndbg/default.nix +++ b/pkgs/development/tools/misc/pwndbg/default.nix @@ -44,7 +44,7 @@ in stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Exploit Development and Reverse Engineering with GDB Made Easy"; - homepage = http://pwndbg.com; + homepage = "https://github.com/pwndbg/pwndbg"; license = licenses.mit; platforms = platforms.linux; maintainers = with maintainers; [ mic92 ]; diff --git a/pkgs/development/tools/misc/reviewdog/default.nix b/pkgs/development/tools/misc/reviewdog/default.nix index 65a7c9eef39..2b20b3bd547 100644 --- a/pkgs/development/tools/misc/reviewdog/default.nix +++ b/pkgs/development/tools/misc/reviewdog/default.nix @@ -2,20 +2,20 @@ buildGoModule rec { pname = "reviewdog"; - version = "0.9.12"; + version = "0.9.14"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "0r7y8nbpwfbvinpapv6lgnlc93kwn4b6722cp5ihyf361fklcd02"; + sha256 = "1npawdvryrxrdfkv4j1jk63l3mwsdgsj85k9yqyhrrphk2w4s1cr"; }; - modSha256 = "1ydfirjhw238zbia5mk90fx9rrg3kvm2h54zjhiimlvnpls5y8c9"; + modSha256 = "0a6bmwysgvwpddh2mp228s2brb0kqfcxqjffs2pabf7ym5flmz0g"; subPackages = [ "cmd/reviewdog" ]; - buildFlagsArray = [ "-ldflags=-X github.com/reviewdog/reviewdog/commands.Version=${version}" ]; + buildFlagsArray = [ "-ldflags=-s -w -X github.com/reviewdog/reviewdog/commands.Version=${version}" ]; meta = with lib; { description = "Automated code review tool integrated with any code analysis tools regardless of programming language"; diff --git a/pkgs/development/tools/misc/strace/default.nix b/pkgs/development/tools/misc/strace/default.nix index 4f71d5ae410..2ecabb68670 100644 --- a/pkgs/development/tools/misc/strace/default.nix +++ b/pkgs/development/tools/misc/strace/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "strace"; - version = "5.3"; + version = "5.4"; src = fetchurl { url = "https://strace.io/files/${version}/${pname}-${version}.tar.xz"; - sha256 = "0ix06z4vnc49mv76f22kixz8dsh7daqv9mpgwcgl0mlnfjc124vc"; + sha256 = "0hd7sb7l99y9rcj8jjc1b6m3ryds17krsymdg3dvd40jsla0bl7p"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { doCheck = false; meta = with stdenv.lib; { - homepage = https://strace.io/; + homepage = "https://strace.io/"; description = "A system call tracer for Linux"; license = with licenses; [ lgpl21Plus gpl2Plus ]; # gpl2Plus is for the test suite platforms = platforms.linux; diff --git a/pkgs/development/tools/misc/usb-modeswitch/data.nix b/pkgs/development/tools/misc/usb-modeswitch/data.nix index fb43ff61a81..d2b80011dea 100644 --- a/pkgs/development/tools/misc/usb-modeswitch/data.nix +++ b/pkgs/development/tools/misc/usb-modeswitch/data.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "usb-modeswitch-data"; - version = "20170806"; + version = "20191128"; src = fetchurl { url = "http://www.draisberghof.de/usb_modeswitch/${pname}-${version}.tar.bz2"; - sha256 = "0b1wari3aza6qjggqd0hk2zsh93k1q8scgmwh6f8wr0flpr3whff"; + sha256 = "1ygahl3r26r38ai8yyblq9nhf3v5i6n6r6672p5wf88wg5h9n0rz"; }; inherit (usb-modeswitch) makeFlags; diff --git a/pkgs/development/tools/misc/usb-modeswitch/default.nix b/pkgs/development/tools/misc/usb-modeswitch/default.nix index 7c119c92943..a0e1b8eb8ce 100644 --- a/pkgs/development/tools/misc/usb-modeswitch/default.nix +++ b/pkgs/development/tools/misc/usb-modeswitch/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "usb-modeswitch"; - version = "2.5.2"; + version = "2.6.0"; src = fetchurl { url = "http://www.draisberghof.de/usb_modeswitch/${pname}-${version}.tar.bz2"; - sha256 = "19ifi80g9ns5dmspchjvfj4ykxssq9yrci8m227dgb3yr04srzxb"; + sha256 = "18wbbxc5cfsmikba0msdvd5qlaga27b32nhrzicyd9mdddp265f2"; }; makeFlags = [ diff --git a/pkgs/development/tools/ocaml/crunch/default.nix b/pkgs/development/tools/ocaml/crunch/default.nix new file mode 100644 index 00000000000..e48707dcb9a --- /dev/null +++ b/pkgs/development/tools/ocaml/crunch/default.nix @@ -0,0 +1,28 @@ +{ lib, buildDunePackage, fetchurl, ocaml, cmdliner, opaline, ptime }: + +buildDunePackage rec { + + pname = "crunch"; + version = "3.1.0"; + + src = fetchurl { + url = "https://github.com/mirage/ocaml-crunch/releases/download/v${version}/crunch-v${version}.tbz"; + sha256 = "0d26715a4h9r1wibnc12xy690m1kan7hrcgbb5qk8x78zsr67lnf"; + }; + + propagatedBuildInputs = [ cmdliner ptime ]; + + outputs = [ "lib" "bin" "out" ]; + + installPhase = '' + ${opaline}/bin/opaline -prefix $bin -libdir $lib/lib/ocaml/${ocaml.version}/site-lib/ + ''; + + meta = { + homepage = "https://github.com/mirage/ocaml-crunch"; + description = "Convert a filesystem into a static OCaml module"; + license = lib.licenses.isc; + maintainers = [ lib.maintainers.vbgl ]; + }; + +} diff --git a/pkgs/development/tools/ocaml/merlin/default.nix b/pkgs/development/tools/ocaml/merlin/default.nix index 67acf874baf..ed3d5efc789 100644 --- a/pkgs/development/tools/ocaml/merlin/default.nix +++ b/pkgs/development/tools/ocaml/merlin/default.nix @@ -1,21 +1,19 @@ -{ stdenv, fetchFromGitHub, buildDunePackage, yojson }: +{ lib, fetchurl, buildDunePackage, yojson }: buildDunePackage rec { pname = "merlin"; - version = "3.3.2"; + version = "3.3.3"; minimumOCamlVersion = "4.02.1"; - src = fetchFromGitHub { - owner = "ocaml"; - repo = pname; - rev = "v${version}"; - sha256 = "1z9mcxflraj15sbz6q7f84n31n9fsialw7z8bi3r1biz68nypva9"; + src = fetchurl { + url = "https://github.com/ocaml/merlin/releases/download/v${version}/merlin-v${version}.tbz"; + sha256 = "05dfkbpbb7nvs4g6y0iw7a9f73ygvhs9l45l2g56y7zagvs9x43j"; }; buildInputs = [ yojson ]; - meta = with stdenv.lib; { + meta = with lib; { description = "An editor-independent tool to ease the development of programs in OCaml"; homepage = "https://github.com/ocaml/merlin"; license = licenses.mit; diff --git a/pkgs/development/tools/ocaml/ocaml-top/default.nix b/pkgs/development/tools/ocaml/ocaml-top/default.nix index 7336439240d..3ceb9b1622c 100644 --- a/pkgs/development/tools/ocaml/ocaml-top/default.nix +++ b/pkgs/development/tools/ocaml/ocaml-top/default.nix @@ -1,15 +1,15 @@ -{ stdenv, fetchzip, ncurses, ocamlPackages }: +{ lib, fetchzip, ncurses, ocamlPackages }: with ocamlPackages; buildDunePackage rec { pname = "ocaml-top"; - version = "1.1.5"; + version = "1.2.0-rc"; src = fetchzip { url = "https://github.com/OCamlPro/ocaml-top/archive/${version}.tar.gz"; - sha256 = "1d4i6aanrafgrgk4mh154k6lkwk0b6mh66rykz33awlf5pfqd8yv"; + sha256 = "1r290m9vvr25lgaanivz05h0kf4fd3h5j61wj4hpp669zffcyyb5"; }; - buildInputs = [ ncurses ocp-build lablgtk ocp-index ]; + buildInputs = [ ncurses ocp-build lablgtk3-sourceview3 ocp-index ]; configurePhase = '' export TERM=xterm @@ -18,8 +18,8 @@ with ocamlPackages; buildDunePackage rec { meta = { homepage = https://www.typerex.org/ocaml-top.html; - license = stdenv.lib.licenses.gpl3; + license = lib.licenses.gpl3; description = "A simple cross-platform OCaml code editor built for top-level evaluation"; - maintainers = with stdenv.lib.maintainers; [ vbgl ]; + maintainers = with lib.maintainers; [ vbgl ]; }; } diff --git a/pkgs/development/tools/ocaml/ocamlformat/default.nix b/pkgs/development/tools/ocaml/ocamlformat/default.nix index 4eb1cc858ad..d599fb7ade1 100644 --- a/pkgs/development/tools/ocaml/ocamlformat/default.nix +++ b/pkgs/development/tools/ocaml/ocamlformat/default.nix @@ -1,16 +1,14 @@ -{ lib, fetchFromGitHub, ocamlPackages }: +{ lib, fetchurl, ocamlPackages }: with ocamlPackages; buildDunePackage rec { pname = "ocamlformat"; - version = "0.11.0"; + version = "0.12"; minimumOCamlVersion = "4.06"; - src = fetchFromGitHub { - owner = "ocaml-ppx"; - repo = pname; - rev = version; - sha256 = "0zvjn71jd4d3znnpgh0yphb2w8ggs457b6bl6cg1fmpdgxnds6yx"; + src = fetchurl { + url = "https://github.com/ocaml-ppx/ocamlformat/releases/download/${version}/ocamlformat-${version}.tbz"; + sha256 = "1zi8x597dhp2822j6j28s84yyiqppl7kykpwqqclx6ybypvlzdpj"; }; buildInputs = [ @@ -25,7 +23,7 @@ with ocamlPackages; buildDunePackage rec { ]; meta = { - inherit (src.meta) homepage; + homepage = "https://github.com/ocaml-ppx/ocamlformat"; description = "Auto-formatter for OCaml code"; maintainers = [ lib.maintainers.Zimmi48 ]; license = lib.licenses.mit; diff --git a/pkgs/development/tools/phantomjs2/default.nix b/pkgs/development/tools/phantomjs2/default.nix index 29b8d4d5ae1..f50e7670b46 100644 --- a/pkgs/development/tools/phantomjs2/default.nix +++ b/pkgs/development/tools/phantomjs2/default.nix @@ -69,6 +69,10 @@ in stdenv.mkDerivation rec { --replace "QT_MINOR_VERSION, 5" "QT_MINOR_VERSION, 9" ''; + # Avoids error in webpage.cpp:80:89: + # invalid suffix on literal; C++11 requires a space between litend identifier + NIX_CFLAGS_COMPILE = "-Wno-reserved-user-defined-literal"; + __impureHostDeps = stdenv.lib.optional stdenv.isDarwin "/usr/lib/libicucore.dylib"; enableParallelBuilding = true; diff --git a/pkgs/development/tools/profiling/pyflame/default.nix b/pkgs/development/tools/profiling/pyflame/default.nix deleted file mode 100644 index 2467769ad3d..00000000000 --- a/pkgs/development/tools/profiling/pyflame/default.nix +++ /dev/null @@ -1,143 +0,0 @@ -{ stdenv, autoreconfHook, coreutils, fetchFromGitHub, fetchpatch, pkgconfig, procps -# pyflame needs one python version per ABI -# are currently supported -# * 2.6 or 2.7 for 2.x ABI -# * 3.4 or 3.5 for 3.{4,5} ABI -# * 3.6 for 3.6 ABI -# * 3.7 for 3.7+ ABI -# to disable support for an ABI, make the corresponding argument null -, python2, python35, python36, python37, python3 -}: -stdenv.mkDerivation rec { - pname = "pyflame"; - version = "1.6.7"; - src = fetchFromGitHub { - owner = "uber"; - repo = "pyflame"; - rev = "v${version}"; - sha256 = "0hz1ryimh0w8zyxx4y8chcn54d6b02spflj5k9rcg26an2chkg2w"; - }; - - # Uber's abandoned this since Jun 2018, so we have to patch a lot. - # Yay. - patches = let - # "Add support for Python3.7 (#151)": - py37-support = [ # https://github.com/uber/pyflame/pull/153 - (fetchpatch { # "Add support for python3.7" - url = "https://github.com/uber/pyflame/commit/5ee674c4b09a29b82a0e2d7a4ce064fea3df1f4c.patch"; - sha256 = "19v0yl8frbsq1dkvcmr1zsxf9v75bs8hvlkiv2x8cwylndvz2g5n"; - }) - (fetchpatch { # "Add python3.7 to travis test matrix" - url = "https://github.com/uber/pyflame/commit/610b5281502ff6d57471e84071f17a33d30f3bcf.patch"; - sha256 = "13kwzrz0zwmdiirg061wvz7zvdl2w9dnrc81xbkxpm1hh8h0mi9z"; - }) - (fetchpatch { # "Update ppa and Ubuntu version" - url = "https://github.com/uber/pyflame/commit/ec82a43c90da64815a87d4e3fe2a12ec3c93dc38.patch"; - sha256 = "1rrcsj5095ns5iyk6ij9kylv8hsrflxjld7b4s5dbpk8jqkf3ndi"; - }) - (fetchpatch { # "Clang-Format" - url = "https://github.com/uber/pyflame/commit/fb81e40398d6209c38d49d0b6758d9581b3c2bba.patch"; - sha256 = "024namalrsai8ppl87lqsalfgd2fbqsnbkhpg8q93bvsdxldwc6r"; - }) - ]; - - # "Fix pyflame for code compiled with ld -z separate-code": - separate-code-support = [ # https://github.com/uber/pyflame/pull/170 - (fetchpatch { # "Fix for code compiled with ld -z separate-code" - url = "https://github.com/uber/pyflame/commit/739a77d9b9abf9599f633d49c9ec98a201bfe058.patch"; - sha256 = "03xhdysr5s73bw3a7nj2h45dylj9a4c1f1i3xqm1nngpd6arq4y6"; - }) - ]; - - # "Improve PtraceSeize error output" - full-ptrace-seize-errors = [ # https://github.com/uber/pyflame/pull/152 - (fetchpatch { # "Print whole error output from PtraceSeize" - url = "https://github.com/uber/pyflame/commit/4b0e2c1b442b0f0c6ac5f56471359cea9886aa0f.patch"; - sha256 = "0nkqs5zszf78cna0bavcdg18g7rdmn72li3091ygpkgxn77cnvis"; - }) - (fetchpatch { # "Print whole error for PtraceSeize" - url = "https://github.com/uber/pyflame/commit/1abb23abe4912c4a27553f0b3b5c934753f41f6d.patch"; - sha256 = "07razp9rlq3s92j8a3iak3qk2h4x4xwz4y915h52ivvnxayscj89"; - }) - ]; - in stdenv.lib.concatLists [ - py37-support - # Without this, tests will leak memory and run forever. - separate-code-support - full-ptrace-seize-errors - ]; - - nativeBuildInputs = [ autoreconfHook pkgconfig procps ]; - buildInputs = [ python37 python36 python2 python35 ]; - - postPatch = '' - patchShebangs . - - # some tests will fail in the sandbox - substituteInPlace tests/test_end_to_end.py \ - --replace 'skipif(IS_DOCKER' 'skipif(True' - - # don't use patchShebangs here to be explicit about the python version - substituteInPlace utils/flame-chart-json \ - --replace '#!usr/bin/env python' '#!${python3.interpreter}' - - # Many tests require the build machine to have kernel.yama.ptrace_scope = 0, - # but hardened machines have it set to 1. On build machines that cannot run - # these tests, skip them to avoid breaking the build. - if [[ $(sysctl -n kernel.yama.ptrace_scope || echo 0) != "0" ]]; then - for test in \ - test_monitor \ - test_non_gil \ - test_threaded \ - test_unthreaded \ - test_legacy_pid_handling \ - test_exclude_idle \ - test_exit_early \ - test_sample_not_python \ - test_include_ts \ - test_include_ts_exclude_idle \ - test_thread_dump \ - test_no_line_numbers \ - test_utf8_output; do - - substituteInPlace tests/test_end_to_end.py \ - --replace "def $test(" "\ -@pytest.mark.skip('build machine had kernel.yama.ptrace_scope != 0') -def $test(" - done - fi - ''; - - postInstall = '' - install -D utils/flame-chart-json $out/bin/flame-chart-json - ''; - - doCheck = true; - # reproduces the logic of their test script, but without downloading pytest - # from the internet with pip - checkPhase = let inherit (stdenv) lib; in - lib.concatMapStringsSep "\n" (python: '' - set -x - PYMAJORVERSION=${lib.substring 0 1 python.version} \ - PATH=${lib.makeBinPath [ coreutils ]}\ - PYTHONPATH= \ - ${python.pkgs.pytest}/bin/pytest -v tests/ - set +x - '') (lib.filter (x: x != null) buildInputs); - - meta = with stdenv.lib; { - description = "A ptracing profiler for Python "; - longDescription = '' - Pyflame is a high performance profiling tool that generates flame graphs - for Python. Pyflame uses the Linux ptrace(2) system call to collect - profiling information. It can take snapshots of the Python call stack - without explicit instrumentation, meaning you can profile a program - without modifying its source code. - ''; - homepage = https://github.com/uber/pyflame; - license = licenses.asl20; - maintainers = [ maintainers.symphorien ]; - # arm: https://github.com/uber/pyflame/issues/136 - platforms = [ "i686-linux" "x86_64-linux" ]; - }; -} diff --git a/pkgs/development/tools/pypi2nix/default.nix b/pkgs/development/tools/pypi2nix/default.nix index 6f8ef1b30a9..76302824d9d 100644 --- a/pkgs/development/tools/pypi2nix/default.nix +++ b/pkgs/development/tools/pypi2nix/default.nix @@ -4,13 +4,11 @@ with python3; pkgs.buildPythonApplication rec { pname = "pypi2nix"; - version = "2.0.1"; + version = "2.0.2"; src = pkgs.fetchPypi { inherit pname version; - sha256 = "138fwd3cznkfa6w3a5s4fbflh88q26hk4grlmq73dcbk06ykf84k"; + sha256 = "1kynyarqx49j89nxd7rx8mjncg8hkklscfcr36smham7cvj17nsv"; }; - checkInputs = with pkgs; [ pytest ]; - buildInputs = with pkgs; [ setuptools_scm ]; propagatedBuildInputs = with pkgs; [ attrs click @@ -20,6 +18,6 @@ pkgs.buildPythonApplication rec { parsley setuptools toml + jsonschema ]; - checkPhase = "${python3.interpreter} -m pytest unittests -m 'not nix'"; } diff --git a/pkgs/development/tools/rust/cargo-crev/default.nix b/pkgs/development/tools/rust/cargo-crev/default.nix new file mode 100644 index 00000000000..01ca288fba8 --- /dev/null +++ b/pkgs/development/tools/rust/cargo-crev/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchFromGitHub, rustPlatform, Security, openssl, pkgconfig, libiconv, curl }: + +rustPlatform.buildRustPackage rec { + pname = "cargo-crev"; + version = "0.13.0"; + + src = fetchFromGitHub { + owner = "crev-dev"; + repo = "cargo-crev"; + rev = "v${version}"; + sha256 = "15b4spz080y411h7niwzb1rshhyd9cx7rc6bpa0myd2kzrfky7yl"; + }; + + cargoSha256 = "02bi6pzm1ys31zi1s5yzyw47dmdgclgkfjyyfa9h686640nakg8d"; + + nativeBuildInputs = [ pkgconfig ]; + + buildInputs = [ openssl ] ++ stdenv.lib.optionals stdenv.isDarwin [ Security libiconv curl ]; + + meta = with stdenv.lib; { + description = "A cryptographically verifiable code review system for the cargo (Rust) package manager"; + homepage = "https://github.com/crev-dev/cargo-crev"; + license = with licenses; [ asl20 mit mpl20 ]; + maintainers = with maintainers; [ b4dm4n ]; + }; +} diff --git a/pkgs/development/tools/rust/cargo-geiger/default.nix b/pkgs/development/tools/rust/cargo-geiger/default.nix index 70601faaf6d..1edeaeb9b46 100644 --- a/pkgs/development/tools/rust/cargo-geiger/default.nix +++ b/pkgs/development/tools/rust/cargo-geiger/default.nix @@ -6,16 +6,16 @@ rustPlatform.buildRustPackage rec { pname = "cargo-geiger"; - version = "0.7.3"; + version = "0.9.0"; src = fetchFromGitHub { owner = "anderejd"; repo = pname; rev = "${pname}-${version}"; - sha256 = "1lm8dx19svdpg99zbpfcm1272n18y63sq756hf6k99zi51av17xc"; + sha256 = "0yn4m94bklxyg0cxzhqm1m976z66rbi58ri1phffvqz457mxj3hk"; }; - cargoSha256 = "16zvm2y0j7ywv6fx0piq99g8q1sayf3qipd6adrwyqyg8rbf4cw6"; + cargoSha256 = "0608wvbdw4i9pp3x6dgny186if6bzlbivkvfd5lfp1x1f53534za"; # Multiple tests require internet connectivity, so they are disabled here. # If we ever get cargo-insta (https://crates.io/crates/insta) in tree, diff --git a/pkgs/development/tools/rust/cargo-make/Cargo.lock b/pkgs/development/tools/rust/cargo-make/Cargo.lock index 54d32639f88..00a2eb721df 100644 --- a/pkgs/development/tools/rust/cargo-make/Cargo.lock +++ b/pkgs/development/tools/rust/cargo-make/Cargo.lock @@ -17,55 +17,47 @@ dependencies = [ ] [[package]] -name = "approx" -version = "0.1.1" -source = "registry+https://github.com/rust-lang/crates.io-index" - -[[package]] name = "arrayref" version = "0.3.5" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "arrayvec" -version = "0.4.12" +version = "0.5.1" source = "registry+https://github.com/rust-lang/crates.io-index" -dependencies = [ - "nodrop 0.1.14 (registry+https://github.com/rust-lang/crates.io-index)", -] [[package]] name = "atty" version = "0.2.13" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "libc 0.2.62 (registry+https://github.com/rust-lang/crates.io-index)", + "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "autocfg" -version = "0.1.6" +version = "0.1.7" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "backtrace" -version = "0.3.38" +version = "0.3.40" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "backtrace-sys 0.1.31 (registry+https://github.com/rust-lang/crates.io-index)", + "backtrace-sys 0.1.32 (registry+https://github.com/rust-lang/crates.io-index)", "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", - "libc 0.2.62 (registry+https://github.com/rust-lang/crates.io-index)", + "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", "rustc-demangle 0.1.16 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "backtrace-sys" -version = "0.1.31" +version = "0.1.32" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "cc 1.0.45 (registry+https://github.com/rust-lang/crates.io-index)", - "libc 0.2.62 (registry+https://github.com/rust-lang/crates.io-index)", + "cc 1.0.48 (registry+https://github.com/rust-lang/crates.io-index)", + "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] @@ -83,11 +75,11 @@ source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "blake2b_simd" -version = "0.5.8" +version = "0.5.9" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ "arrayref 0.3.5 (registry+https://github.com/rust-lang/crates.io-index)", - "arrayvec 0.4.12 (registry+https://github.com/rust-lang/crates.io-index)", + "arrayvec 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)", "constant_time_eq 0.1.4 (registry+https://github.com/rust-lang/crates.io-index)", ] @@ -98,39 +90,40 @@ source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "c2-chacha" -version = "0.2.2" +version = "0.2.3" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)", - "ppv-lite86 0.2.5 (registry+https://github.com/rust-lang/crates.io-index)", + "ppv-lite86 0.2.6 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "cargo-make" -version = "0.24.0" +version = "0.24.2" dependencies = [ - "ci_info 0.8.1 (registry+https://github.com/rust-lang/crates.io-index)", + "ci_info 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)", "clap 2.33.0 (registry+https://github.com/rust-lang/crates.io-index)", - "colored 1.8.0 (registry+https://github.com/rust-lang/crates.io-index)", + "colored 1.9.0 (registry+https://github.com/rust-lang/crates.io-index)", "dirs 2.0.2 (registry+https://github.com/rust-lang/crates.io-index)", "envmnt 0.7.4 (registry+https://github.com/rust-lang/crates.io-index)", - "fern 0.5.8 (registry+https://github.com/rust-lang/crates.io-index)", + "fern 0.5.9 (registry+https://github.com/rust-lang/crates.io-index)", + "git_info 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)", "glob 0.3.0 (registry+https://github.com/rust-lang/crates.io-index)", - "indexmap 1.2.0 (registry+https://github.com/rust-lang/crates.io-index)", + "home 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)", + "indexmap 1.3.0 (registry+https://github.com/rust-lang/crates.io-index)", "log 0.4.8 (registry+https://github.com/rust-lang/crates.io-index)", "rand 0.7.2 (registry+https://github.com/rust-lang/crates.io-index)", "run_script 0.3.2 (registry+https://github.com/rust-lang/crates.io-index)", "rust_info 0.2.2 (registry+https://github.com/rust-lang/crates.io-index)", "semver 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)", - "serde 1.0.101 (registry+https://github.com/rust-lang/crates.io-index)", - "serde_derive 1.0.101 (registry+https://github.com/rust-lang/crates.io-index)", + "serde 1.0.103 (registry+https://github.com/rust-lang/crates.io-index)", + "serde_derive 1.0.103 (registry+https://github.com/rust-lang/crates.io-index)", "shell2batch 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)", - "toml 0.5.3 (registry+https://github.com/rust-lang/crates.io-index)", + "toml 0.5.5 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "cc" -version = "1.0.45" +version = "1.0.48" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] @@ -139,18 +132,18 @@ version = "0.1.10" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] -name = "cgmath" -version = "0.16.1" +name = "chrono" +version = "0.4.10" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "approx 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)", - "num-traits 0.1.43 (registry+https://github.com/rust-lang/crates.io-index)", - "rand 0.4.6 (registry+https://github.com/rust-lang/crates.io-index)", + "num-integer 0.1.41 (registry+https://github.com/rust-lang/crates.io-index)", + "num-traits 0.2.10 (registry+https://github.com/rust-lang/crates.io-index)", + "time 0.1.42 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "ci_info" -version = "0.8.1" +version = "0.9.0" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ "envmnt 0.7.4 (registry+https://github.com/rust-lang/crates.io-index)", @@ -166,7 +159,7 @@ dependencies = [ "bitflags 1.2.1 (registry+https://github.com/rust-lang/crates.io-index)", "strsim 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)", "textwrap 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)", - "unicode-width 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)", + "unicode-width 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", "vec_map 0.8.1 (registry+https://github.com/rust-lang/crates.io-index)", ] @@ -180,11 +173,12 @@ dependencies = [ [[package]] name = "colored" -version = "1.8.0" +version = "1.9.0" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ + "atty 0.2.13 (registry+https://github.com/rust-lang/crates.io-index)", "lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)", - "winconsole 0.10.0 (registry+https://github.com/rust-lang/crates.io-index)", + "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] @@ -216,7 +210,7 @@ version = "0.3.4" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", - "libc 0.2.62 (registry+https://github.com/rust-lang/crates.io-index)", + "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", "redox_users 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)", "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", ] @@ -226,7 +220,7 @@ name = "envmnt" version = "0.7.4" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "indexmap 1.2.0 (registry+https://github.com/rust-lang/crates.io-index)", + "indexmap 1.3.0 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] @@ -234,7 +228,7 @@ name = "failure" version = "0.1.6" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "backtrace 0.3.38 (registry+https://github.com/rust-lang/crates.io-index)", + "backtrace 0.3.40 (registry+https://github.com/rust-lang/crates.io-index)", "failure_derive 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)", ] @@ -243,17 +237,18 @@ name = "failure_derive" version = "0.1.6" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "proc-macro2 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)", + "proc-macro2 1.0.6 (registry+https://github.com/rust-lang/crates.io-index)", "quote 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)", - "syn 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)", - "synstructure 0.12.1 (registry+https://github.com/rust-lang/crates.io-index)", + "syn 1.0.11 (registry+https://github.com/rust-lang/crates.io-index)", + "synstructure 0.12.3 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "fern" -version = "0.5.8" +version = "0.5.9" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ + "chrono 0.4.10 (registry+https://github.com/rust-lang/crates.io-index)", "log 0.4.8 (registry+https://github.com/rust-lang/crates.io-index)", ] @@ -264,25 +259,40 @@ source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "getrandom" -version = "0.1.12" +version = "0.1.13" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", - "libc 0.2.62 (registry+https://github.com/rust-lang/crates.io-index)", + "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", "wasi 0.7.0 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] +name = "git_info" +version = "0.1.1" +source = "registry+https://github.com/rust-lang/crates.io-index" + +[[package]] name = "glob" version = "0.3.0" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] +name = "home" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "scopeguard 1.0.0 (registry+https://github.com/rust-lang/crates.io-index)", + "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] name = "indexmap" -version = "1.2.0" +version = "1.3.0" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "serde 1.0.101 (registry+https://github.com/rust-lang/crates.io-index)", + "autocfg 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", + "serde 1.0.103 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] @@ -292,7 +302,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "libc" -version = "0.2.62" +version = "0.2.66" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] @@ -309,34 +319,30 @@ version = "2.2.1" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] -name = "nodrop" -version = "0.1.14" -source = "registry+https://github.com/rust-lang/crates.io-index" - -[[package]] -name = "num-traits" -version = "0.1.43" +name = "num-integer" +version = "0.1.41" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "num-traits 0.2.8 (registry+https://github.com/rust-lang/crates.io-index)", + "autocfg 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", + "num-traits 0.2.10 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "num-traits" -version = "0.2.8" +version = "0.2.10" source = "registry+https://github.com/rust-lang/crates.io-index" dependencies = [ - "autocfg 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)", + "autocfg 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", ] [[package]] name = "ppv-lite86" -version = "0.2.5" +version = "0.2.6" source = "registry+https://github.com/rust-lang/crates.io-index" [[package]] name = "proc-macro2" -version = "1.0.5" +version = "1.0.6" source = 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(registry+https://github.com/rust-lang/crates.io-index)" = "2089e4031214d129e201f8c3c8c2fe97cd7322478a0d1cdf78e7029b0042efdb" "checksum run_script 0.3.2 (registry+https://github.com/rust-lang/crates.io-index)" = "61b3a5ed82e15afc3e238178e2d22113af69ac88bd64a04499f025478853937f" "checksum rust-argon2 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)" = "4ca4eaef519b494d1f2848fc602d18816fed808a981aedf4f1f00ceb7c9d32cf" "checksum rust_info 0.2.2 (registry+https://github.com/rust-lang/crates.io-index)" = "6e4e04a5022c08c95c2285b0beb4cdd24c9b20bc018a263d6fdb0372f7a597db" "checksum rustc-demangle 0.1.16 (registry+https://github.com/rust-lang/crates.io-index)" = "4c691c0e608126e00913e33f0ccf3727d5fc84573623b8d65b2df340b5201783" +"checksum scopeguard 1.0.0 (registry+https://github.com/rust-lang/crates.io-index)" = "b42e15e59b18a828bbf5c58ea01debb36b9b096346de35d941dcb89009f24a0d" "checksum semver 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)" = "1d7eb9ef2c18661902cc47e535f9bc51b78acd254da71d375c2f6720d9a40403" "checksum semver-parser 0.7.0 (registry+https://github.com/rust-lang/crates.io-index)" = "388a1df253eca08550bef6c72392cfe7c30914bf41df5269b68cbd6ff8f570a3" -"checksum serde 1.0.101 (registry+https://github.com/rust-lang/crates.io-index)" = "9796c9b7ba2ffe7a9ce53c2287dfc48080f4b2b362fcc245a259b3a7201119dd" -"checksum serde_derive 1.0.101 (registry+https://github.com/rust-lang/crates.io-index)" = "4b133a43a1ecd55d4086bd5b4dc6c1751c68b1bfbeba7a5040442022c7e7c02e" +"checksum serde 1.0.103 (registry+https://github.com/rust-lang/crates.io-index)" = "1217f97ab8e8904b57dd22eb61cde455fa7446a9c1cf43966066da047c1f3702" +"checksum serde_derive 1.0.103 (registry+https://github.com/rust-lang/crates.io-index)" = "a8c6faef9a2e64b0064f48570289b4bf8823b7581f1d6157c1b52152306651d0" "checksum shell2batch 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)" = "185a52ee351c1001753c9e3b2eb48c525ff7f51803a4f2cef4365b5c3b743f65" "checksum strsim 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)" = "8ea5119cdb4c55b55d432abb513a0429384878c15dde60cc77b1c99de1a95a6a" -"checksum syn 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)" = "66850e97125af79138385e9b88339cbcd037e3f28ceab8c5ad98e64f0f1f80bf" -"checksum synstructure 0.12.1 (registry+https://github.com/rust-lang/crates.io-index)" = "3f085a5855930c0441ca1288cf044ea4aecf4f43a91668abdb870b4ba546a203" +"checksum syn 1.0.11 (registry+https://github.com/rust-lang/crates.io-index)" = "dff0acdb207ae2fe6d5976617f887eb1e35a2ba52c13c7234c790960cdad9238" +"checksum synstructure 0.12.3 (registry+https://github.com/rust-lang/crates.io-index)" = "67656ea1dc1b41b1451851562ea232ec2e5a80242139f7e679ceccfb5d61f545" "checksum textwrap 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)" = "d326610f408c7a4eb6f51c37c330e496b08506c9457c9d34287ecc38809fb060" "checksum thread_local 0.3.6 (registry+https://github.com/rust-lang/crates.io-index)" = "c6b53e329000edc2b34dbe8545fd20e55a333362d0a321909685a19bd28c3f1b" -"checksum toml 0.5.3 (registry+https://github.com/rust-lang/crates.io-index)" = "c7aabe75941d914b72bf3e5d3932ed92ce0664d49d8432305a8b547c37227724" -"checksum unicode-width 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)" = "7007dbd421b92cc6e28410fe7362e2e0a2503394908f417b68ec8d1c364c4e20" +"checksum time 0.1.42 (registry+https://github.com/rust-lang/crates.io-index)" = "db8dcfca086c1143c9270ac42a2bbd8a7ee477b78ac8e45b19abfb0cbede4b6f" +"checksum toml 0.5.5 (registry+https://github.com/rust-lang/crates.io-index)" = "01d1404644c8b12b16bfcffa4322403a91a451584daaaa7c28d3152e6cbc98cf" +"checksum unicode-width 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)" = "caaa9d531767d1ff2150b9332433f32a24622147e5ebb1f26409d5da67afd479" "checksum unicode-xid 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)" = "826e7639553986605ec5979c7dd957c7895e93eabed50ab2ffa7f6128a75097c" "checksum users 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)" = "c72f4267aea0c3ec6d07eaabea6ead7c5ddacfafc5e22bcf8d186706851fb4cf" "checksum vec_map 0.8.1 (registry+https://github.com/rust-lang/crates.io-index)" = "05c78687fb1a80548ae3250346c3db86a80a7cdd77bda190189f2d0a0987c81a" @@ -724,4 +717,3 @@ dependencies = [ "checksum winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)" = "8093091eeb260906a183e6ae1abdba2ef5ef2257a21801128899c3fc699229c6" "checksum winapi-i686-pc-windows-gnu 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6" "checksum winapi-x86_64-pc-windows-gnu 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f" -"checksum winconsole 0.10.0 (registry+https://github.com/rust-lang/crates.io-index)" = "3ef84b96d10db72dd980056666d7f1e7663ce93d82fa33b63e71c966f4cf5032" diff --git a/pkgs/development/tools/rust/cargo-make/default.nix b/pkgs/development/tools/rust/cargo-make/default.nix index 795329e3fe9..e4cb070464c 100644 --- a/pkgs/development/tools/rust/cargo-make/default.nix +++ b/pkgs/development/tools/rust/cargo-make/default.nix @@ -2,7 +2,7 @@ rustPlatform.buildRustPackage rec { pname = "cargo-make"; - version = "0.24.0"; + version = "0.24.2"; src = let @@ -10,7 +10,7 @@ rustPlatform.buildRustPackage rec { owner = "sagiegurari"; repo = pname; rev = version; - sha256 = "1sdc9qkclvv99j7ag038g8h1kjvfjxxj16xy0cqn8wvyljrqn3mc"; + sha256 = "02fc3vf802dzqvyh61cmkjf3vqf5xsl8dhjggns7p5zr2aqh8pfi"; }; in runCommand "cargo-make-src" {} '' @@ -21,7 +21,7 @@ rustPlatform.buildRustPackage rec { buildInputs = stdenv.lib.optionals stdenv.isDarwin [ Security ]; - cargoSha256 = "1hyc275drl5n0kcvkxd3blp77r8nck946bmlnnzym8cj50i5zbq1"; + cargoSha256 = "1x2pkis82hsikjqgma7f6wmkcmviiqwc7pvdpmww61iq2aqfg7ds"; # Some tests fail because they need network access. # However, Travis ensures a proper build. diff --git a/pkgs/development/tools/rust/cargo-raze/default.nix b/pkgs/development/tools/rust/cargo-raze/default.nix index 1c4e176966d..142edbdaf11 100644 --- a/pkgs/development/tools/rust/cargo-raze/default.nix +++ b/pkgs/development/tools/rust/cargo-raze/default.nix @@ -3,13 +3,13 @@ rustPlatform.buildRustPackage rec { pname = "cargo-raze"; - version = "0.2.8"; + version = "0.2.10"; src = fetchFromGitHub { owner = "google"; repo = pname; rev = "v${version}"; - sha256 = "0d87azip59bmkk38par23f5yvb9w8ikvdg6grn689zpgc3di2phx"; + sha256 = "1fznh8jygzyzphw7762qc2jv0370z7qjqk1vkql0g246iqby8pq9"; }; sourceRoot = "source/impl"; diff --git a/pkgs/development/tools/rust/cargo-xbuild/default.nix b/pkgs/development/tools/rust/cargo-xbuild/default.nix index 81814300655..a5220775b52 100644 --- a/pkgs/development/tools/rust/cargo-xbuild/default.nix +++ b/pkgs/development/tools/rust/cargo-xbuild/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "cargo-xbuild"; - version = "0.5.18"; + version = "0.5.19"; src = fetchFromGitHub { owner = "rust-osdev"; repo = pname; rev = "v${version}"; - sha256 = "1hcsdwwl1xc59f1ppwlxj1zyp1md07z70gfvg4zqvafc6dzx708j"; + sha256 = "0j15d52bpl3k6jw0hzcxdvjayd2azdp5b9s2fq3ywd4zbda8rqp7"; }; cargoSha256 = "1pj4x8y5vfpnn8vhxqqm3vicn29870r3jh0b17q3riq4vz1a2afp"; diff --git a/pkgs/development/tools/skaffold/default.nix b/pkgs/development/tools/skaffold/default.nix index 58dde838692..498de0edecf 100644 --- a/pkgs/development/tools/skaffold/default.nix +++ b/pkgs/development/tools/skaffold/default.nix @@ -2,9 +2,9 @@ buildGoPackage rec { pname = "skaffold"; - version = "0.36.0"; - # rev is the 0.36.0 commit, mainly for skaffold version command output - rev = "1c054d4ffc7e14b4d81efcbea8b2022403ee4b89"; + version = "1.0.1"; + # rev is the 1.0.1 commit, mainly for skaffold version command output + rev = "934dd5ad304bef89cb3619b5b2ef53eb8cf04715"; goPackagePath = "github.com/GoogleContainerTools/skaffold"; subPackages = ["cmd/skaffold"]; @@ -20,7 +20,7 @@ buildGoPackage rec { owner = "GoogleContainerTools"; repo = "skaffold"; rev = "v${version}"; - sha256 = "1d7z36r33lmxm5cv1kby6g9zbsr88prgsp32x4jcs9l1ifwblhng"; + sha256 = "0pvidf8m6v56qa3dlqls55jcmjqb54spkx7xxynvhj3590pjw4qx"; }; meta = { diff --git a/pkgs/development/tools/vim-vint/default.nix b/pkgs/development/tools/vim-vint/default.nix index 8eccdb6c285..382871ff6af 100644 --- a/pkgs/development/tools/vim-vint/default.nix +++ b/pkgs/development/tools/vim-vint/default.nix @@ -1,31 +1,26 @@ -{ fetchFromGitHub, lib, python3Packages }: +{ lib, python3Packages }: with python3Packages; buildPythonApplication rec { pname = "vim-vint"; - version = "0.3.20"; + version = "0.3.21"; - src = fetchFromGitHub { - owner = "kuniwak"; - repo = "vint"; - rev = "v${version}"; - sha256 = "0ij9br4z9h8qay6l41sicr4lbjc38hxsn3lgjrj9zpn2b3585syx"; + src = python3Packages.fetchPypi { + inherit pname version; + sha256 = "15qdh8fby9xgfjxidcfv1xmrqqrxxapky7zmyn46qx1abhp9piax"; }; # For python 3.5 > version > 2.7 , a nested dependency (pythonPackages.hypothesis) fails. disabled = ! pythonAtLeast "3.5"; - # Prevent setup.py from adding dependencies in run-time and insisting on specific package versions - postPatch = '' - substituteInPlace setup.py --replace "return requires" "return []" - ''; - checkInputs = [ pytest ]; - propagatedBuildInputs = [ ansicolor chardet pyyaml setuptools] ; + checkInputs = [ pytest pytestcov ]; + propagatedBuildInputs = [ ansicolor chardet pyyaml setuptools ]; - # The acceptance tests check for stdout and location of binary files, which fails in nix-build. - checkPhase = '' - py.test -k "not acceptance" + # Unpin test dependency versions. This is fixed in master but not yet released. + preCheck = '' + sed -i 's/==.*//g' test-requirements.txt + sed -i 's/mock == 1.0.1/mock/g' setup.py ''; meta = with lib; { diff --git a/pkgs/development/tools/yarn/default.nix b/pkgs/development/tools/yarn/default.nix index 3384dac5410..154b228e0e1 100644 --- a/pkgs/development/tools/yarn/default.nix +++ b/pkgs/development/tools/yarn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "yarn"; - version = "1.19.2"; + version = "1.21.1"; src = fetchzip { url = "https://github.com/yarnpkg/yarn/releases/download/v${version}/yarn-v${version}.tar.gz"; - sha256 = "05sjf7pgdj3hh92j2xxl683frrkiw1rqxs72z3an4gb83nllvi0n"; + sha256 = "1yw3v62a6309f9hr189870i9jw2a15pkians1nnfjqczzh7r5pih"; }; buildInputs = [ nodejs ]; diff --git a/pkgs/development/web/insomnia/default.nix b/pkgs/development/web/insomnia/default.nix index 68a28ddfeba..00ffa9d1d62 100644 --- a/pkgs/development/web/insomnia/default.nix +++ b/pkgs/development/web/insomnia/default.nix @@ -16,12 +16,12 @@ let ]; in stdenv.mkDerivation rec { pname = "insomnia"; - version = "7.0.3"; + version = "7.0.5"; src = fetchurl { url = "https://github.com/getinsomnia/insomnia/releases/download/v${version}/insomnia_${version}_amd64.deb"; - sha256 = "14mkvza7q6l2hn763pjy6zavcg1fmzanys3930w32g07vq3xi97l"; + sha256 = "1zcxldfi4rxg7rr6r588blhihyh7ggcdy32vwzjklgq7ihsvx5bs"; }; nativeBuildInputs = diff --git a/pkgs/development/web/nodejs/v10.nix b/pkgs/development/web/nodejs/v10.nix index 22887a44aff..a3b975e3718 100644 --- a/pkgs/development/web/nodejs/v10.nix +++ b/pkgs/development/web/nodejs/v10.nix @@ -5,6 +5,6 @@ let in buildNodejs { inherit enableNpm; - version = "10.17.0"; - sha256 = "13n5cvb340ba7vwm8il7bjrmpz89h6cibhk9rc3kq9ymdgbnf9j1"; + version = "10.18.0"; + sha256 = "1ppycqffsy7ix6whdp6id7ld1qizwvjlzxyk12kxw4wphjmn49hb"; } diff --git a/pkgs/development/web/nodejs/v12.nix b/pkgs/development/web/nodejs/v12.nix index fbec83c387a..61c433bc0d4 100644 --- a/pkgs/development/web/nodejs/v12.nix +++ b/pkgs/development/web/nodejs/v12.nix @@ -5,8 +5,8 @@ let in buildNodejs { inherit enableNpm; - version = "12.13.1"; - sha256 = "14mia71sr8p0ibz9g4j5xb5qwmik36qi5nhabjbv0sy2kirkm7il"; + version = "12.14.0"; + sha256 = "0wdyz6fymkf2pfb5bf5ddcza7f2n55p9zqjvq661nr5gl9xj32h8"; patches = stdenv.lib.optionals stdenv.isDarwin [ ./disable-libatomic-darwin.patch ]; } diff --git a/pkgs/development/web/twitter-bootstrap/default.nix b/pkgs/development/web/twitter-bootstrap/default.nix index 61e7947a479..d0de36d426a 100644 --- a/pkgs/development/web/twitter-bootstrap/default.nix +++ b/pkgs/development/web/twitter-bootstrap/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "bootstrap"; - version = "4.3.1"; + version = "4.4.1"; src = fetchurl { url = "https://github.com/twbs/bootstrap/releases/download/v${version}/${pname}-${version}-dist.zip"; - sha256 = "08rkg4q8x36k03g1d81brhncrzb98sh8r53a5wg3i4p1nwqgv3w8"; + sha256 = "1gdzp54f2xyvbw9hnyjlj4s69jvxkxr3hqclq1c8ajmx39s7rymz"; }; buildInputs = [ unzip ]; diff --git a/pkgs/development/web/wml/default.nix b/pkgs/development/web/wml/default.nix index 57fedb78407..841a6ebecb0 100644 --- a/pkgs/development/web/wml/default.nix +++ b/pkgs/development/web/wml/default.nix @@ -56,7 +56,7 @@ perlPackages.buildPerlPackage { installTargets = "install"; meta = with stdenv.lib; { - homepage = http://thewml.org/; + homepage = "https://www.shlomifish.org/open-source/projects/website-meta-language/"; description = "Off-line HTML generation toolkit for Unix"; license = licenses.gpl2; platforms = platforms.linux; diff --git a/pkgs/games/anki/default.nix b/pkgs/games/anki/default.nix index c3caf9105d0..c1ba8851f5c 100644 --- a/pkgs/games/anki/default.nix +++ b/pkgs/games/anki/default.nix @@ -163,10 +163,13 @@ buildPythonApplication rec { ''; dontWrapQtApps = true; - makeWrapperArgs = [ - ''--prefix PATH ':' "${lame}/bin:${mplayer}/bin"'' - "\${qtWrapperArgs[@]}" - ]; + + preFixup = '' + makeWrapperArgs+=( + "''${qtWrapperArgs[@]}" + --prefix PATH ':' "${lame}/bin:${mplayer}/bin" + ) + ''; # now wrapPythonPrograms from postFixup will add both python and qt env variables diff --git a/pkgs/games/cataclysm-dda/git.nix b/pkgs/games/cataclysm-dda/git.nix index b872e95d589..8e3c3e33994 100644 --- a/pkgs/games/cataclysm-dda/git.nix +++ b/pkgs/games/cataclysm-dda/git.nix @@ -10,15 +10,18 @@ let in stdenv.mkDerivation (common // rec { - version = "2019-05-03"; + version = "2019-11-22"; name = "cataclysm-dda-git-${version}"; src = fetchFromCleverRaven { - rev = "65a05026e7306b5d1228dc6ed885c43447f128b5"; - sha256 = "18yn0h6b4j9lx67sq1d886la3l6l7bqsnwj6mw2khidssiy18y0n"; + rev = "a6c8ece992bffeae3788425dd4b3b5871e66a9cd"; + sha256 = "0ww2q5gykxm802z1kffmnrfahjlx123j1gfszklpsv0b1fccm1ab"; }; - patches = [ ./patches/fix_locale_dir_git.patch ]; + patches = [ + # Locale patch required for Darwin builds, see: https://github.com/NixOS/nixpkgs/pull/74064#issuecomment-560083970 + ./patches/fix_locale_dir_git.patch + ]; makeFlags = common.makeFlags ++ [ "VERSION=git-${version}-${substring 0 8 src.rev}" diff --git a/pkgs/games/cataclysm-dda/patches/fix_locale_dir_git.patch b/pkgs/games/cataclysm-dda/patches/fix_locale_dir_git.patch index 1b92c881661..79b442ff5c9 100644 --- a/pkgs/games/cataclysm-dda/patches/fix_locale_dir_git.patch +++ b/pkgs/games/cataclysm-dda/patches/fix_locale_dir_git.patch @@ -1,8 +1,8 @@ diff --git a/src/translations.cpp b/src/translations.cpp -index 0068a35785..c8034cbeac 100644 +index 067e2cd77d..5660d18b3d 100644 --- a/src/translations.cpp +++ b/src/translations.cpp -@@ -202,14 +202,12 @@ void set_language() +@@ -211,14 +211,12 @@ void set_language() auto env = getenv( "LANGUAGE" ); locale_dir = std::string( FILENAMES["base_path"] + "lang/mo/" + ( env ? env : "none" ) + "/LC_MESSAGES/cataclysm-dda.mo" ); @@ -16,5 +16,5 @@ index 0068a35785..c8034cbeac 100644 -#else - locale_dir = "lang/mo"; #endif - + const char *locale_dir_char = locale_dir.c_str(); diff --git a/pkgs/games/flare/default.nix b/pkgs/games/flare/default.nix index 551276b1b25..2058abebb55 100644 --- a/pkgs/games/flare/default.nix +++ b/pkgs/games/flare/default.nix @@ -16,7 +16,7 @@ buildEnv { meta = with lib; { description = "Fantasy action RPG using the FLARE engine"; - homepage = "http://flarerpg.org/"; + homepage = "https://flarerpg.org/"; maintainers = [ maintainers.aanderse ]; license = [ licenses.gpl3 licenses.cc-by-sa-30 ]; platforms = platforms.unix; diff --git a/pkgs/games/harmonist/default.nix b/pkgs/games/harmonist/default.nix index a391a73069a..19074a309dd 100644 --- a/pkgs/games/harmonist/default.nix +++ b/pkgs/games/harmonist/default.nix @@ -3,13 +3,13 @@ buildGoPackage rec { pname = "harmonist"; - version = "0.2"; + version = "0.3.0"; goPackagePath = "git.tuxfamily.org/harmonist/harmonist.git"; src = fetchurl { url = "https://download.tuxfamily.org/harmonist/releases/${pname}-${version}.tar.gz"; - sha256 = "1r78v312x2k1v9rkxkxffs5vxn9sc0dcszm66yw10p7qy9lyvicd"; + sha256 = "16bh4zzq7szwcw19n34bslkf81fz3i0p4zqkd8gdi5ixkbm998lm"; }; goDeps = ./deps.nix; diff --git a/pkgs/games/harmonist/deps.nix b/pkgs/games/harmonist/deps.nix index c65c0e33998..68290823625 100644 --- a/pkgs/games/harmonist/deps.nix +++ b/pkgs/games/harmonist/deps.nix @@ -4,8 +4,8 @@ fetch = { type = "git"; url = "https://github.com/nsf/termbox-go"; - rev = "eeb6cd0a176293eeb2c69270d83835972e3567bc"; - sha256 = "14695dk07dj41s5f74l3wdf3xjj2flq4fq016i98f5xijh5f64i3"; + rev = "93860e16131719fa9722e7c448dbf8c0e3210a0d"; + sha256 = "03hz060cy8qrl4kgr80pbq6xvr38z4c6ghr3y81i8g854rvp6426"; }; } { @@ -13,8 +13,8 @@ fetch = { type = "git"; url = "https://github.com/mattn/go-runewidth"; - rev = "703b5e6b11ae25aeb2af9ebb5d5fdf8fa2575211"; - sha256 = "0znpyz71gajx3g0j2zp63nhjj2c07g16885vxv4ykwnrfmzbgk4w"; + rev = "18c3d09a134a52720932bbaa92c798a0ab111004"; + sha256 = "1snr8mk63vz2h44knq26dm81p83887v7kb09iywqmx0nqzngih66"; }; } ] diff --git a/pkgs/games/hexen/default.nix b/pkgs/games/hexen/default.nix deleted file mode 100644 index 48379da3a0a..00000000000 --- a/pkgs/games/hexen/default.nix +++ /dev/null @@ -1,18 +0,0 @@ -{stdenv, fetchurl, SDL} : - -stdenv.mkDerivation { - name = "hexen-0.2.3"; - src = fetchurl { - url = https://www.libsdl.org/projects/hexen/src/hexen-0.2.3.tar.gz; - sha256 = "c1433e930f2003c5f817f935406bb28ba15298a15b1c11f83f42df3e9f1f3bc4"; - }; - - buildInputs = [ SDL ]; - - meta = { - homepage = http://www.libsdl.org/projects/hexen/; - description = "Port of Raven Software's popular Hexen 3-D shooter game"; - license = stdenv.lib.licenses.free; - broken = true; - }; -} diff --git a/pkgs/games/instead/default.nix b/pkgs/games/instead/default.nix index b25341da01d..fff15b5c5b0 100644 --- a/pkgs/games/instead/default.nix +++ b/pkgs/games/instead/default.nix @@ -1,7 +1,7 @@ -{ stdenv, fetchurl, SDL, SDL_ttf, SDL_image, SDL_mixer, pkgconfig, lua, zlib, unzip }: +{ stdenv, fetchurl, SDL2, SDL2_ttf, SDL2_image, SDL2_mixer, pkgconfig, lua, zlib, unzip }: let - version = "3.3.0"; + version = "3.3.1"; # I took several games at random from http://instead.syscall.ru/games/ games = [ @@ -33,13 +33,13 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://sourceforge/project/instead/instead/${version}/instead_${version}.tar.gz"; - sha256 = "0kskwrq2gy1gpp97134sjrw08ip1h6i5dc64zrbl9yv7jaz4by69"; + sha256 = "10bppcdjnd0all71l5akdvy7fx0c8s8x0za9qxszs8cjmlv9z1q0"; }; NIX_LDFLAGS = "-llua -lgcc_s"; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ SDL SDL_ttf SDL_image SDL_mixer lua zlib unzip ]; + nativeBuildInputs = [ pkgconfig unzip ]; + buildInputs = [ SDL2 SDL2_ttf SDL2_image SDL2_mixer lua zlib ]; configurePhase = '' { echo 2; echo $out; } | ./configure.sh @@ -47,9 +47,7 @@ stdenv.mkDerivation { inherit games; - installPhase = '' - make install - + postInstall = '' pushd $out/share/instead/games for a in $games; do unzip $a @@ -57,6 +55,8 @@ stdenv.mkDerivation { popd ''; + enableParallelBuilding = true; + meta = with stdenv.lib; { description = "Simple text adventure interpreter for Unix and Windows"; homepage = http://instead.syscall.ru/; diff --git a/pkgs/games/minecraft/default.nix b/pkgs/games/minecraft/default.nix index 0de2268c1af..f71a0e4fd20 100644 --- a/pkgs/games/minecraft/default.nix +++ b/pkgs/games/minecraft/default.nix @@ -84,11 +84,11 @@ in stdenv.mkDerivation rec { pname = "minecraft-launcher"; - version = "2.1.7658"; + version = "2.1.9618"; src = fetchurl { url = "https://launcher.mojang.com/download/linux/x86_64/minecraft-launcher_${version}.tar.gz"; - sha256 = "10sng7l0q9r98zwifjmy50nyh65ny4djmacz8158hffcsfcx93px"; + sha256 = "1wk7414i9n6yvhhc0g3cpqjs4ryklmdp2pxgvfdg9zibjdx0avvy"; }; icon = fetchurl { diff --git a/pkgs/games/mnemosyne/default.nix b/pkgs/games/mnemosyne/default.nix index 99c369fdce8..779d9a98522 100644 --- a/pkgs/games/mnemosyne/default.nix +++ b/pkgs/games/mnemosyne/default.nix @@ -1,5 +1,6 @@ { fetchurl , python +, anki }: python.pkgs.buildPythonApplication rec { @@ -11,29 +12,39 @@ python.pkgs.buildPythonApplication rec { sha256 = "0xcwikq51abrlqfn5bv7kcw1ccd3ip0w6cjd5vnnzwnaqwdj8cb3"; }; + nativeBuildInputs = with python.pkgs; [ wrapPython pyqtwebengine.wrapQtAppsHook ]; + + buildInputs = [ anki ]; + propagatedBuildInputs = with python.pkgs; [ + pyqtwebengine pyqt5 matplotlib cherrypy cheroot webob - pillow ]; - # No tests/ directrory in tarball - doCheck = false; - prePatch = '' substituteInPlace setup.py --replace /usr $out find . -type f -exec grep -H sys.exec_prefix {} ';' | cut -d: -f1 | xargs sed -i s,sys.exec_prefix,\"$out\", ''; + # No tests/ directrory in tarball + doCheck = false; + postInstall = '' mkdir -p $out/share mv $out/${python.sitePackages}/$out/share/locale $out/share rm -r $out/${python.sitePackages}/nix ''; + dontWrapQtApps = true; + + preFixup = '' + makeWrapperArgs+=("''${qtWrapperArgs[@]}") + ''; + meta = { homepage = https://mnemosyne-proj.org/; description = "Spaced-repetition software"; diff --git a/pkgs/games/mudlet/default.nix b/pkgs/games/mudlet/default.nix index d2646bf8d67..a402587ed8b 100644 --- a/pkgs/games/mudlet/default.nix +++ b/pkgs/games/mudlet/default.nix @@ -1,4 +1,4 @@ -{ fetchFromGitHub, fetchpatch, stdenv, wrapQtAppsHook, pcre, pugixml, qtbase, qtmultimedia, qttools, yajl, libzip, hunspell +{ fetchFromGitHub, fetchpatch, stdenv, wrapQtAppsHook, git, pcre, pugixml, qtbase, libsForQt5, qtmultimedia, qttools, yajl, libzip, hunspell , boost, libGLU, lua, cmake, which, }: let @@ -6,19 +6,19 @@ let in stdenv.mkDerivation rec { pname = "mudlet"; - version = "4.1.2"; + version = "4.3"; src = fetchFromGitHub { owner = "Mudlet"; repo = "Mudlet"; rev = "Mudlet-${version}"; fetchSubmodules = true; - sha256 = "1d6r51cj8a71hmhzsayd2far4hliwz5pnrsaj3dn39m7c0iikgdn"; + sha256 = "0qqdmivfwf9jmv5yx90z1fj99nlhnq762lfw6bcxgv74y4l4b4c0"; }; - nativeBuildInputs = [ cmake wrapQtAppsHook qttools which ]; + nativeBuildInputs = [ cmake wrapQtAppsHook git qttools which ]; buildInputs = [ - pcre pugixml qtbase qtmultimedia luaEnv libzip libGLU yajl boost hunspell + pcre pugixml qtbase libsForQt5.qtkeychain qtmultimedia luaEnv libzip libGLU yajl boost hunspell ]; WITH_FONTS = "NO"; @@ -43,6 +43,7 @@ stdenv.mkDerivation rec { makeQtWrapper $out/mudlet $out/bin/mudlet \ --set LUA_CPATH "${luaEnv}/lib/lua/${lua.luaversion}/?.so" \ --prefix LUA_PATH : "$NIX_LUA_PATH" \ + --prefix LD_LIBRARY_PATH : "${libsForQt5.qtkeychain}/lib/" \ --run "cd $out"; ''; diff --git a/pkgs/games/qtads/default.nix b/pkgs/games/qtads/default.nix new file mode 100644 index 00000000000..dda7799aacb --- /dev/null +++ b/pkgs/games/qtads/default.nix @@ -0,0 +1,27 @@ +{ lib, stdenv, fetchFromGitHub, fetchpatch, pkgconfig, qmake +, SDL2, fluidsynth, libsndfile, libvorbis, mpg123, qtbase +}: + +stdenv.mkDerivation rec { + pname = "qtads"; + version = "2.1.99.2019-04-12"; + + src = fetchFromGitHub { + owner = "realnc"; + repo = pname; + rev = "43289a830a18c66a293c2b1ee75a08e92e8dd5dc"; + sha256 = "0zscf6nmjjc4i7c38iy8znv2s453xc49gn7knyi3g1l6iinjwbx7"; + }; + + nativeBuildInputs = [ pkgconfig qmake ]; + + buildInputs = [ SDL2 fluidsynth libsndfile libvorbis mpg123 qtbase ]; + + meta = with lib; { + homepage = https://realnc.github.io/qtads/; + description = "Multimedia interpreter for TADS games"; + license = licenses.gpl3Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ orivej ]; + }; +} diff --git a/pkgs/games/quake3/quake3e/default.nix b/pkgs/games/quake3/quake3e/default.nix index 2c9367bfe76..1e179f2f956 100644 --- a/pkgs/games/quake3/quake3e/default.nix +++ b/pkgs/games/quake3/quake3e/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "Quake3e"; - version = "2019-09-09"; + version = "2019-11-29"; src = fetchFromGitHub { owner = "ec-"; repo = pname; rev = version; - sha256 = "0i9flw8h87lagdpbci6vgqkriv05p3bidgqb4pwrxls947zwfcw8"; + sha256 = "1gpfl72rzwiawhcj3ir38sqdb95y7w7lm7wgj44lbn99z7bvkcn3"; }; buildInputs = [ curl libGL libX11 libXxf86dga alsaLib libXrandr libXxf86vm libXext ]; diff --git a/pkgs/games/sgt-puzzles/default.nix b/pkgs/games/sgt-puzzles/default.nix index 428be470b3e..8349be64264 100644 --- a/pkgs/games/sgt-puzzles/default.nix +++ b/pkgs/games/sgt-puzzles/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "sgt-puzzles-r${version}"; - version = "20190415.e2135d5"; + version = "20191114.1c0c49d"; src = fetchurl { url = "http://www.chiark.greenend.org.uk/~sgtatham/puzzles/puzzles-${version}.tar.gz"; - sha256 = "02p9kpvmqa0cm9y0lzdy7g8h4b4mqma8d9jfvgi2yysbgjfzq2ak"; + sha256 = "01fi2f3w71bfbgcfr6gxdp5a9cxh4dshbflv83q2j5rxxs2ll870"; }; nativeBuildInputs = [ autoreconfHook makeWrapper pkgconfig perl wrapGAppsHook ]; @@ -41,6 +41,6 @@ stdenv.mkDerivation rec { license = licenses.mit; maintainers = [ maintainers.raskin ]; platforms = platforms.linux; - homepage = http://www.chiark.greenend.org.uk/~sgtatham/puzzles/; + homepage = https://www.chiark.greenend.org.uk/~sgtatham/puzzles/; }; } diff --git a/pkgs/misc/cups/drivers/dymo/fix-includes.patch b/pkgs/misc/cups/drivers/dymo/fix-includes.patch index fa7df5591dd..55f71369a00 100644 --- a/pkgs/misc/cups/drivers/dymo/fix-includes.patch +++ b/pkgs/misc/cups/drivers/dymo/fix-includes.patch @@ -65,3 +65,16 @@ diff -rp dymo-cups-drivers-1.4.0.5/src/lw/CupsFilterLabelWriter.h dymo-cups-driv #include <cups/raster.h> #include "LabelWriterDriver.h" #include "LabelWriterLanguageMonitor.h" +diff -rp dymo-cups-drivers-1.4.0.5/src/common/CupsPrintEnvironment.cpp dymo-cups-drivers-1.4.0.5-fix/src/common/CupsPrintEnvironment.cpp +*** dymo-cups-drivers-1.4.0.5/src/common/CupsPrintEnvironment.cpp 2019-12-16 19:37:23.429662838 +0000 +--- dymo-cups-drivers-1.4.0.5-fix/src/common/CupsPrintEnvironment.cpp 2019-12-16 19:41:48.506991614 +0000 +*************** +*** 23,28 **** +--- 23,29 ---- + #include "CupsPrintEnvironment.h" + #include <errno.h> + #include <cups/cups.h> ++ #include <cups/sidechannel.h> + #include <cassert> + + namespace DymoPrinterDriver diff --git a/pkgs/misc/drivers/hplip/default.nix b/pkgs/misc/drivers/hplip/default.nix index fe890f3dce2..d81032ef270 100644 --- a/pkgs/misc/drivers/hplip/default.nix +++ b/pkgs/misc/drivers/hplip/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, substituteAll , pkgconfig -, cups, zlib, libjpeg, libusb1, python2Packages, sane-backends +, cups, zlib, libjpeg, libusb1, python3Packages, sane-backends , dbus, file, ghostscript, usbutils , net_snmp, openssl, perl, nettools , bash, coreutils, utillinux @@ -46,7 +46,7 @@ in assert withPlugin -> builtins.elem hplipArch pluginArches || throw "HPLIP plugin not supported on ${stdenv.hostPlatform.system}"; -python2Packages.buildPythonApplication { +python3Packages.buildPythonApplication { inherit name src; format = "other"; @@ -68,13 +68,14 @@ python2Packages.buildPythonApplication { pkgconfig ]; - pythonPath = with python2Packages; [ + pythonPath = with python3Packages; [ dbus pillow pygobject2 reportlab usbutils sip + dbus-python ] ++ stdenv.lib.optionals withQt5 [ pyqt5 enum-compat diff --git a/pkgs/misc/emulators/fuse-emulator/default.nix b/pkgs/misc/emulators/fuse-emulator/default.nix new file mode 100644 index 00000000000..a3a379eb2cf --- /dev/null +++ b/pkgs/misc/emulators/fuse-emulator/default.nix @@ -0,0 +1,29 @@ +{ lib, stdenv, fetchurl, perl, pkgconfig, wrapGAppsHook +, SDL, bzip2, glib, gtk3, libgcrypt, libpng, libspectrum, libxml2, zlib +}: + +stdenv.mkDerivation rec { + pname = "fuse-emulator"; + version = "1.5.7"; + + src = fetchurl { + url = "mirror://sourceforge/${pname}/fuse-${version}.tar.gz"; + sha256 = "0kaynjr28w42n3iha60mgr7nxm49w8j0v49plyrc7ka24qzmiqph"; + }; + + nativeBuildInputs = [ perl pkgconfig wrapGAppsHook ]; + + buildInputs = [ SDL bzip2 glib gtk3 libgcrypt libpng libspectrum libxml2 zlib ]; + + configureFlags = [ "--enable-desktop-integration" ]; + + enableParallelBuilding = true; + + meta = with lib; { + homepage = http://fuse-emulator.sourceforge.net/; + description = "ZX Spectrum emulator"; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ orivej ]; + }; +} diff --git a/pkgs/misc/emulators/mame/default.nix b/pkgs/misc/emulators/mame/default.nix index 499d7dd6c4a..d98232b1058 100644 --- a/pkgs/misc/emulators/mame/default.nix +++ b/pkgs/misc/emulators/mame/default.nix @@ -1,9 +1,9 @@ -{ stdenv, mkDerivation, fetchFromGitHub, makeDesktopItem +{ stdenv, mkDerivation, fetchFromGitHub, makeDesktopItem, makeWrapper , python, pkgconfig, SDL2, SDL2_ttf, alsaLib, which, qtbase, libXinerama }: let majorVersion = "0"; - minorVersion = "215"; + minorVersion = "216"; desktopItem = makeDesktopItem { name = "MAME"; @@ -12,6 +12,8 @@ let genericName = "MAME is a multi-purpose emulation framework"; categories = "System;Emulator;"; }; + + dest = "$out/opt/mame"; in mkDerivation { pname = "mame"; version = "${majorVersion}.${minorVersion}"; @@ -20,7 +22,7 @@ in mkDerivation { owner = "mamedev"; repo = "mame"; rev = "mame${majorVersion}${minorVersion}"; - sha256 = "1phz846p3zzgzrbfiq2vn79iqar2dbf7iv6wfkrp32sdkkvp7l3h"; + sha256 = "0dmmw08pxxznvadrc51zg27jc9fjh688355w8kxkmi7k8qa367r0"; }; hardeningDisable = [ "fortify" ]; @@ -28,22 +30,35 @@ in mkDerivation { makeFlags = [ "TOOLS=1" ]; + dontWrapQtApps = true; + buildInputs = [ SDL2 SDL2_ttf alsaLib qtbase libXinerama ]; - nativeBuildInputs = [ python pkgconfig which ]; + nativeBuildInputs = [ python pkgconfig which makeWrapper ]; - installPhase = '' - dest=$out/opt/mame + # by default MAME assumes that paths with stock resources + # are relative and that you run MAME changing to + # install directory, so we add absolute paths here + patches = [ ./emuopts.patch ]; - make -f dist.mak PTR64=${if stdenv.is64bit then "1" else "0"} - mkdir -p $dest - mv build/release/${if stdenv.is64bit then "x64" else "x32"}/Release/mame/* $dest + postPatch = '' + substituteInPlace src/emu/emuopts.cpp \ + --subst-var-by mame ${dest} + ''; + + installPhase = '' + make -f dist.mak PTR64=${stdenv.lib.optionalString stdenv.is64bit "1"} + mkdir -p ${dest} + mv build/release/*/Release/mame/* ${dest} mkdir -p $out/bin - find $dest -maxdepth 1 -executable -type f -exec mv -t $out/bin {} \; + find ${dest} -maxdepth 1 -executable -type f -exec mv -t $out/bin {} \; + install -Dm755 src/osd/sdl/taputil.sh $out/bin/taputil.sh mkdir -p $out/share/man/man{1,6} - mv $dest/docs/man/*.1 $out/share/man/man1 - mv $dest/docs/man/*.6 $out/share/man/man6 + mv ${dest}/docs/man/*.1 $out/share/man/man1 + mv ${dest}/docs/man/*.6 $out/share/man/man6 + + mv artwork plugins samples ${dest} mkdir -p $out/share ln -s ${desktopItem}/share/applications $out/share diff --git a/pkgs/misc/emulators/mame/emuopts.patch b/pkgs/misc/emulators/mame/emuopts.patch new file mode 100644 index 00000000000..b85291f52f7 --- /dev/null +++ b/pkgs/misc/emulators/mame/emuopts.patch @@ -0,0 +1,29 @@ +diff --git a/src/emu/emuopts.cpp b/src/emu/emuopts.cpp +index c42fcef848..d1bddae060 100644 +--- a/src/emu/emuopts.cpp ++++ b/src/emu/emuopts.cpp +@@ -36,16 +36,16 @@ const options_entry emu_options::s_option_entries[] = + { nullptr, nullptr, OPTION_HEADER, "CORE SEARCH PATH OPTIONS" }, + { OPTION_HOMEPATH, ".", OPTION_STRING, "path to base folder for plugin data (read/write)" }, + { OPTION_MEDIAPATH ";rp;biospath;bp", "roms", OPTION_STRING, "path to ROM sets and hard disk images" }, +- { OPTION_HASHPATH ";hash_directory;hash", "hash", OPTION_STRING, "path to software definition files" }, +- { OPTION_SAMPLEPATH ";sp", "samples", OPTION_STRING, "path to audio sample sets" }, +- { OPTION_ARTPATH, "artwork", OPTION_STRING, "path to artwork files" }, +- { OPTION_CTRLRPATH, "ctrlr", OPTION_STRING, "path to controller definitions" }, +- { OPTION_INIPATH, ".;ini;ini/presets", OPTION_STRING, "path to ini files" }, +- { OPTION_FONTPATH, ".", OPTION_STRING, "path to font files" }, ++ { OPTION_HASHPATH ";hash_directory;hash", "hash;@mame@/hash", OPTION_STRING, "path to software definition files" }, ++ { OPTION_SAMPLEPATH ";sp", "samples;@mame@/samples", OPTION_STRING, "path to audio sample sets" }, ++ { OPTION_ARTPATH, "artwork;@mame@/artwork", OPTION_STRING, "path to artwork files" }, ++ { OPTION_CTRLRPATH, "ctrlr;@mame@/ctrlr", OPTION_STRING, "path to controller definitions" }, ++ { OPTION_INIPATH, ".;ini;ini/presets;@mame@/ini/presets", OPTION_STRING, "path to ini files" }, ++ { OPTION_FONTPATH, ".;@mame@", OPTION_STRING, "path to font files" }, + { OPTION_CHEATPATH, "cheat", OPTION_STRING, "path to cheat files" }, + { OPTION_CROSSHAIRPATH, "crosshair", OPTION_STRING, "path to crosshair files" }, +- { OPTION_PLUGINSPATH, "plugins", OPTION_STRING, "path to plugin files" }, +- { OPTION_LANGUAGEPATH, "language", OPTION_STRING, "path to UI translation files" }, ++ { OPTION_PLUGINSPATH, "plugins;@mame@/plugins", OPTION_STRING, "path to plugin files" }, ++ { OPTION_LANGUAGEPATH, "language;@mame@/language", OPTION_STRING, "path to UI translation files" }, + { OPTION_SWPATH, "software", OPTION_STRING, "path to loose software" }, + + // output directory options diff --git a/pkgs/misc/emulators/ppsspp/default.nix b/pkgs/misc/emulators/ppsspp/default.nix index 98ea02cd897..b976c1e8c27 100644 --- a/pkgs/misc/emulators/ppsspp/default.nix +++ b/pkgs/misc/emulators/ppsspp/default.nix @@ -1,45 +1,69 @@ -{ stdenv, mkDerivation, fetchFromGitHub, cmake, pkgconfig, qtbase, qtmultimedia -, glew, libzip, snappy, zlib, withGamepads ? true, SDL2 }: - -assert withGamepads -> (SDL2 != null); -with stdenv.lib; +{ SDL2 +, cmake +, fetchFromGitHub +, ffmpeg +, glew +, lib +, libzip +, mkDerivation +, pkgconfig +, python3 +, qtbase +, qtmultimedia +, snappy +, zlib +}: mkDerivation rec { pname = "ppsspp"; - version = "1.4.2"; + version = "1.9.3"; src = fetchFromGitHub { owner = "hrydgard"; repo = "ppsspp"; rev = "v${version}"; fetchSubmodules = true; - sha256 = "0m4qkhx7q496sm7ibg2n7rm3npxzfr93iraxgndk0vhfk8vy8w75"; + sha256 = "17sym0vk72lzbh9a1501mhw98c78x1gq7k1fpy69nvvb119j37wa"; }; - patchPhase = '' - echo 'const char *PPSSPP_GIT_VERSION = "${src.rev}";' >> git-version.cpp - substituteInPlace UI/NativeApp.cpp --replace /usr/share $out/share + postPatch = '' + substituteInPlace git-version.cmake \ + --replace unknown ${src.rev} + substituteInPlace UI/NativeApp.cpp \ + --replace /usr/share $out/share ''; - nativeBuildInputs = [ cmake pkgconfig ]; - buildInputs = [ qtbase qtmultimedia glew libzip snappy zlib ] - ++ optionals withGamepads [ SDL2 SDL2.dev ]; + nativeBuildInputs = [ cmake pkgconfig python3 ]; + + buildInputs = [ + SDL2 + ffmpeg + glew + libzip + qtbase + qtmultimedia + snappy + zlib + ]; - cmakeFlags = [ "-DCMAKE_BUILD_TYPE=Release" "-DUSING_QT_UI=ON" ]; + cmakeFlags = [ + "-DOpenGL_GL_PREFERENCE=GLVND" + "-DUSE_SYSTEM_FFMPEG=ON" + "-DUSE_SYSTEM_LIBZIP=ON" + "-DUSE_SYSTEM_SNAPPY=ON" + "-DUSING_QT_UI=ON" + ]; installPhase = '' - mkdir -p $out/bin $out/share/ppsspp - mv PPSSPPQt $out/bin/ppsspp + mkdir -p $out/share/ppsspp + install -Dm555 PPSSPPQt $out/bin/ppsspp mv assets $out/share/ppsspp ''; - enableParallelBuilding = true; - - meta = { - homepage = https://www.ppsspp.org/; + meta = with lib; { description = "A PSP emulator for Android, Windows, Mac and Linux, written in C++"; + homepage = "https://www.ppsspp.org/"; license = licenses.gpl2Plus; maintainers = with maintainers; [ AndersonTorres ]; - platforms = platforms.linux ++ platforms.darwin ++ platforms.cygwin; }; } diff --git a/pkgs/misc/sailsd/default.nix b/pkgs/misc/sailsd/default.nix index ea2435c50ae..49d86491aa0 100644 --- a/pkgs/misc/sailsd/default.nix +++ b/pkgs/misc/sailsd/default.nix @@ -4,18 +4,18 @@ let libsailing = fetchFromGitHub { owner = "sails-simulator"; repo = "libsailing"; - rev = "c24cddb717f81cd432868b8d41e04486c0a440fd"; - sha256 = "0mna0c9n8lvfdf4y1iigjy3dlks70hq6jik52zkik2yxvkqv949f"; + rev = "9b2863ff0c539cd23d91b0254032a7af9c840574"; + sha256 = "06rcxkwgms9sxqr1swnnc4jnvgs0iahm4cksd475yd1bp5p1gq6j"; }; in stdenv.mkDerivation rec { - version = "0.2.0"; + version = "0.3.0"; pname = "sailsd"; src = fetchFromGitHub { owner = "sails-simulator"; repo = "sailsd"; rev = version; - sha256 = "147cr4aw1kw4gv3bhn0cska855kmyah8m70vdw1q2lwz56lbf4mb"; + sha256 = "1s4nlffp683binbdxwwzbsci61kbjylbcr1jf44sv1h1r5d5js05"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/misc/screensavers/xlockmore/default.nix b/pkgs/misc/screensavers/xlockmore/default.nix index 771abf79c1d..5e8fa725080 100644 --- a/pkgs/misc/screensavers/xlockmore/default.nix +++ b/pkgs/misc/screensavers/xlockmore/default.nix @@ -2,11 +2,11 @@ , libXdmcp, libXt }: stdenv.mkDerivation rec { - name = "xlockmore-5.59"; + name = "xlockmore-5.60"; src = fetchurl { url = "http://sillycycle.com/xlock/${name}.tar.xz"; - sha256 = "0lajc5a4lki33b9mzfsi74q4hbivbmhwysp7mib4ivnyxianhaid"; + sha256 = "16v7y9g42a4g2dlhj5qfcax9ydg814zfxb8c9yj69c6kl51xdh79"; curlOpts = "--user-agent 'Mozilla/5.0'"; }; diff --git a/pkgs/misc/tmux-plugins/default.nix b/pkgs/misc/tmux-plugins/default.nix index 4b93ec8dff9..0d10b44ab1e 100644 --- a/pkgs/misc/tmux-plugins/default.nix +++ b/pkgs/misc/tmux-plugins/default.nix @@ -95,8 +95,8 @@ in rec { pluginName = "ctrlw"; src = fetchgit { url = "https://github.com/eraserhd/tmux-ctrlw"; - rev = "2354b5d56828813d0f7a4b228ca74b6134c2695f"; - sha256 = "00hy1axmki8h2285mivsj923z327xkq89wfl2x4dxc71xjhdl216"; + rev = "b456977125c640cd587b786c6a79cb5c7b0f900d"; + sha256 = "1kv5pqfjczd6z7i9jf6j5xmcai50l9bn5p2p1w1l5fi6cj8cz1k1"; }; }; diff --git a/pkgs/misc/uboot/default.nix b/pkgs/misc/uboot/default.nix index 0c30e76b3fa..8a07461bb2f 100644 --- a/pkgs/misc/uboot/default.nix +++ b/pkgs/misc/uboot/default.nix @@ -1,5 +1,6 @@ -{ stdenv, lib, fetchurl, fetchpatch, bc, bison, dtc, flex, openssl, swig -, armTrustedFirmwareAllwinner +{ stdenv, lib, fetchurl, fetchpatch, fetchFromGitHub, bc, bison, dtc, flex +, openssl, swig, armTrustedFirmwareAllwinner, armTrustedFirmwareRK3328 +, armTrustedFirmwareRK3399 , buildPackages }: @@ -27,14 +28,22 @@ let src = if src == null then defaultSrc else src; patches = [ + # Submitted upstream: https://patchwork.ozlabs.org/patch/1203693/ (fetchpatch { url = https://github.com/dezgeg/u-boot/commit/extlinux-path-length-2018-03.patch; sha256 = "07jafdnxvqv8lz256qy29agjc2k1zj5ad4k28r1w5qkhwj4ixmf8"; }) + # Submitted upstream: https://patchwork.ozlabs.org/patch/1203678/ + (fetchpatch { + name = "rockchip-allow-loading-larger-kernels.patch"; + url = "https://marc.info/?l=u-boot&m=157537843004298&q=raw"; + sha256 = "0l3l88cc9xkxkraql82pfgpx6nqn4dj7cvfaagh5pzfwkxyw0n3p"; + }) ] ++ extraPatches; postPatch = '' patchShebangs tools + patchShebangs arch/arm/mach-rockchip ''; nativeBuildInputs = [ @@ -251,6 +260,43 @@ in { filesToInstall = ["u-boot.bin"]; }; + ubootRock64 = let + rkbin = fetchFromGitHub { + owner = "ayufan-rock64"; + repo = "rkbin"; + rev = "f79a708978232a2b6b06c2e4173c5314559e0d3a"; + sha256 = "0h7xm4ck3p3380c6bqm5ixrkxwcx6z5vysqdwvfa7gcqx5d6x5zz"; + }; + in buildUBoot { + extraMakeFlags = [ "all" "u-boot.itb" ]; + defconfig = "rock64-rk3328_defconfig"; + extraMeta = { + platforms = [ "aarch64-linux" ]; + license = lib.licenses.unfreeRedistributableFirmware; + }; + BL31="${armTrustedFirmwareRK3328}/bl31.elf"; + filesToInstall = [ "u-boot.itb" "idbloader.img"]; + # Derive MAC address from cpuid + # Submitted upstream: https://patchwork.ozlabs.org/patch/1203686/ + extraConfig = '' + CONFIG_MISC_INIT_R=y + ''; + # Close to being blob free, but the U-Boot TPL causes random memory + # corruption + postBuild = '' + ./tools/mkimage -n rk3328 -T rksd -d ${rkbin}/rk33/rk3328_ddr_786MHz_v1.13.bin idbloader.img + cat spl/u-boot-spl.bin >> idbloader.img + ''; + }; + + ubootRockPro64 = buildUBoot { + extraMakeFlags = [ "all" "u-boot.itb" ]; + defconfig = "rockpro64-rk3399_defconfig"; + extraMeta.platforms = ["aarch64-linux"]; + BL31="${armTrustedFirmwareRK3399}/bl31.elf"; + filesToInstall = [ "u-boot.itb" "idbloader.img"]; + }; + ubootSheevaplug = buildUBoot { defconfig = "sheevaplug_defconfig"; extraMeta.platforms = ["armv5tel-linux"]; diff --git a/pkgs/misc/uboot/rock64-fdt-dtc-compatibility.patch b/pkgs/misc/uboot/rock64-fdt-dtc-compatibility.patch deleted file mode 100644 index 92725cac5b4..00000000000 --- a/pkgs/misc/uboot/rock64-fdt-dtc-compatibility.patch +++ /dev/null @@ -1,105 +0,0 @@ -From fbee2adffd39b03e10262b09779faef94c4d5a9d Mon Sep 17 00:00:00 2001 -From: Ben Wolsieffer <benwolsieffer@gmail.com> -Date: Thu, 18 Apr 2019 15:50:24 -0400 -Subject: [PATCH] fdt: make compatible with dtc >=1.4.6 - -Signed-off-by: Ben Wolsieffer <benwolsieffer@gmail.com> ---- - include/libfdt_env.h | 6 +++--- - lib/libfdt/fdt.h | 6 +++--- - lib/libfdt/libfdt.h | 6 +++--- - lib/libfdt/libfdt_internal.h | 6 +++--- - tools/dtoc/fdt.py | 2 +- - 5 files changed, 13 insertions(+), 13 deletions(-) - -diff --git a/include/libfdt_env.h b/include/libfdt_env.h -index 6c6845f76c..1fbcd0ef83 100644 ---- a/include/libfdt_env.h -+++ b/include/libfdt_env.h -@@ -6,8 +6,8 @@ - * SPDX-License-Identifier: LGPL-2.1+ - */ - --#ifndef _LIBFDT_ENV_H --#define _LIBFDT_ENV_H -+#ifndef LIBFDT_ENV_H -+#define LIBFDT_ENV_H - - #include "compiler.h" - #include "linux/types.h" -@@ -32,4 +32,4 @@ typedef __be64 fdt64_t; - /* adding a ramdisk needs 0x44 bytes in version 2008.10 */ - #define FDT_RAMDISK_OVERHEAD 0x80 - --#endif /* _LIBFDT_ENV_H */ -+#endif /* LIBFDT_ENV_H */ -diff --git a/lib/libfdt/fdt.h b/lib/libfdt/fdt.h -index 3134d78332..38cc182739 100644 ---- a/lib/libfdt/fdt.h -+++ b/lib/libfdt/fdt.h -@@ -1,5 +1,5 @@ --#ifndef _FDT_H --#define _FDT_H -+#ifndef FDT_H -+#define FDT_H - /* - * libfdt - Flat Device Tree manipulation - * Copyright (C) 2006 David Gibson, IBM Corporation. -@@ -64,4 +64,4 @@ struct fdt_property { - #define FDT_V16_SIZE FDT_V3_SIZE - #define FDT_V17_SIZE (FDT_V16_SIZE + sizeof(fdt32_t)) - --#endif /* _FDT_H */ -+#endif /* FDT_H */ -diff --git a/lib/libfdt/libfdt.h b/lib/libfdt/libfdt.h -index cb533f4275..9345a59f05 100644 ---- a/lib/libfdt/libfdt.h -+++ b/lib/libfdt/libfdt.h -@@ -1,5 +1,5 @@ --#ifndef _LIBFDT_H --#define _LIBFDT_H -+#ifndef LIBFDT_H -+#define LIBFDT_H - /* - * libfdt - Flat Device Tree manipulation - * Copyright (C) 2006 David Gibson, IBM Corporation. -@@ -2189,4 +2189,4 @@ int fdt_device_is_available(const void *blob, int node); - int fdt_node_offset_by_phandle_node(const void *fdt, int node, uint32_t phandle); - #endif /* SWIG */ - --#endif /* _LIBFDT_H */ -+#endif /* LIBFDT_H */ -diff --git a/lib/libfdt/libfdt_internal.h b/lib/libfdt/libfdt_internal.h -index 9a79fe85dd..8fdda7ee79 100644 ---- a/lib/libfdt/libfdt_internal.h -+++ b/lib/libfdt/libfdt_internal.h -@@ -1,5 +1,5 @@ --#ifndef _LIBFDT_INTERNAL_H --#define _LIBFDT_INTERNAL_H -+#ifndef LIBFDT_INTERNAL_H -+#define LIBFDT_INTERNAL_H - /* - * libfdt - Flat Device Tree manipulation - * Copyright (C) 2006 David Gibson, IBM Corporation. -@@ -47,4 +47,4 @@ static inline struct fdt_reserve_entry *_fdt_mem_rsv_w(void *fdt, int n) - - #define FDT_SW_MAGIC (~FDT_MAGIC) - --#endif /* _LIBFDT_INTERNAL_H */ -+#endif /* LIBFDT_INTERNAL_H */ -diff --git a/tools/dtoc/fdt.py b/tools/dtoc/fdt.py -index dbc338653b..ac2191fb37 100644 ---- a/tools/dtoc/fdt.py -+++ b/tools/dtoc/fdt.py -@@ -360,7 +360,7 @@ class Fdt: - poffset = libfdt.fdt_first_property_offset(self._fdt, node._offset) - while poffset >= 0: - p = self._fdt_obj.get_property_by_offset(poffset) -- prop = Prop(node, poffset, p.name, p.value) -+ prop = Prop(node, poffset, p.name, p) - props_dict[prop.name] = prop - - poffset = libfdt.fdt_next_property_offset(self._fdt, poffset) --- -2.21.0 - diff --git a/pkgs/misc/uboot/rock64.nix b/pkgs/misc/uboot/rock64.nix deleted file mode 100644 index 9dd43f5fe7e..00000000000 --- a/pkgs/misc/uboot/rock64.nix +++ /dev/null @@ -1,38 +0,0 @@ -{ lib, buildUBoot, fetchFromGitHub, armTrustedFirmwareRK3328 }: let - rkbin = fetchFromGitHub { - owner = "ayufan-rock64"; - repo = "rkbin"; - rev = "f79a708978232a2b6b06c2e4173c5314559e0d3a"; - sha256 = "0h7xm4ck3p3380c6bqm5ixrkxwcx6z5vysqdwvfa7gcqx5d6x5zz"; - }; -in buildUBoot { - version = "2017.09"; - - src = fetchFromGitHub { - owner = "ayufan-rock64"; - repo = "linux-u-boot"; - rev = "56bd9582537a70c30387de3ce9038a56d2c77bfe"; - sha256 = "1m0k8ivzhmg9y4x0k7fz7y71pgblzxy81m6x32iivz5kjnxdnv4i"; - }; - - extraPatches = [ ./rock64-fdt-dtc-compatibility.patch ]; - - extraMakeFlags = [ "BL31=${armTrustedFirmwareRK3328}/bl31.elf" "u-boot.itb" "all" ]; - - # Close to being blob free, but the U-Boot TPL causes the kernel to hang after a few minutes - postBuild = '' - ./tools/mkimage -n rk3328 -T rksd -d ${rkbin}/rk33/rk3328_ddr_786MHz_v1.13.bin idbloader.img - cat spl/u-boot-spl.bin >> idbloader.img - dd if=u-boot.itb of=idbloader.img seek=448 conv=notrunc - ''; - - defconfig = "rock64-rk3328_defconfig"; - filesToInstall = [ "spl/u-boot-spl.bin" "tpl/u-boot-tpl.bin" "u-boot.itb" "idbloader.img"]; - - extraMeta = with lib; { - maintainers = [ maintainers.lopsided98 ]; - platforms = ["aarch64-linux"]; - # Because of the TPL blob - license = licenses.unfreeRedistributableFirmware; - }; -} diff --git a/pkgs/misc/uboot/rockpro64.nix b/pkgs/misc/uboot/rockpro64.nix deleted file mode 100644 index 436e1bcdf87..00000000000 --- a/pkgs/misc/uboot/rockpro64.nix +++ /dev/null @@ -1,38 +0,0 @@ -{ lib, buildUBoot, fetchFromGitHub }: let - rkbin = fetchFromGitHub { - owner = "ayufan-rock64"; - repo = "rkbin"; - rev = "f79a708978232a2b6b06c2e4173c5314559e0d3a"; - sha256 = "0h7xm4ck3p3380c6bqm5ixrkxwcx6z5vysqdwvfa7gcqx5d6x5zz"; - }; -in buildUBoot { - version = "2017.09"; - - src = fetchFromGitHub { - owner = "ayufan-rock64"; - repo = "linux-u-boot"; - rev = "56bd9582537a70c30387de3ce9038a56d2c77bfe"; - sha256 = "1m0k8ivzhmg9y4x0k7fz7y71pgblzxy81m6x32iivz5kjnxdnv4i"; - }; - - extraPatches = [ ./rock64-fdt-dtc-compatibility.patch ]; - - # Upstream ATF hangs in SPL - extraMakeFlags = [ "BL31=${rkbin}/rk33/rk3399_bl31_v1.25.elf" "u-boot.itb" "all" ]; - - postBuild = '' - ./tools/mkimage -n rk3399 -T rksd -d ${rkbin}/rk33/rk3399_ddr_933MHz_v1.19.bin idbloader.img - cat spl/u-boot-spl.bin >> idbloader.img - dd if=u-boot.itb of=idbloader.img seek=448 conv=notrunc - ''; - - defconfig = "rockpro64-rk3399_defconfig"; - filesToInstall = [ "spl/u-boot-spl.bin" "u-boot.itb" "idbloader.img"]; - - extraMeta = with lib; { - maintainers = [ maintainers.lopsided98 ]; - platforms = ["aarch64-linux"]; - # Because of the TPL and ATF (BL31) blobs - license = licenses.unfreeRedistributableFirmware; - }; -} diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix index c3f283fb160..f1ebc8cb7d9 100644 --- a/pkgs/misc/vim-plugins/generated.nix +++ b/pkgs/misc/vim-plugins/generated.nix @@ -39,12 +39,12 @@ let agda-vim = buildVimPluginFrom2Nix { pname = "agda-vim"; - version = "2019-08-04"; + version = "2019-12-08"; src = fetchFromGitHub { owner = "derekelkins"; repo = "agda-vim"; - rev = "4fc0a0a95a347b7b98715a78b6f41edd5aa084c5"; - sha256 = "15zzc1aqzflw36462ka5914cmfqckciqcgcff0kfmzglfcx7is6z"; + rev = "fbb55d9ef8829630ea8f12c112bebc69c7a15337"; + sha256 = "0fg43ggaxpnybc9ism4b5q7l0n6rdgh4vkpch80x89mwld287lqv"; }; }; @@ -83,12 +83,12 @@ let ansible-vim = buildVimPluginFrom2Nix { pname = "ansible-vim"; - version = "2019-09-27"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "pearofducks"; repo = "ansible-vim"; - rev = "ac2e4f55aedddd7f473aaaa4035062c3c489e8c3"; - sha256 = "0kgdm06g67y3pfzcd4wqdrc59klxchrim755ml1038hbnk39lilj"; + rev = "19e6ae0f2258953591d7c674abd7aca3ceb51374"; + sha256 = "0283nm92666idvwp0pzy6yzcfvrqy12nwn9zys1jbs34kk6srwa8"; }; }; @@ -204,12 +204,12 @@ let calendar-vim = buildVimPluginFrom2Nix { pname = "calendar-vim"; - version = "2019-12-03"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "itchyny"; repo = "calendar.vim"; - rev = "335e67e32865259c8a1f27a08fd1260a8cb1897b"; - sha256 = "1n35sf4v1piww31kqzg88s4xb5gdsxqgjvfmlif16na1kdvyjwd5"; + rev = "6d6ac26c537b996819eda9f0cf8f303d10048c10"; + sha256 = "120bx0wskkpk2r05sv74430270lf3c5j1z02bd05i9747dbjcgq5"; }; }; @@ -336,12 +336,12 @@ let coc-go = buildVimPluginFrom2Nix { pname = "coc-go"; - version = "2019-11-27"; + version = "2019-12-16"; src = fetchFromGitHub { owner = "josa42"; repo = "coc-go"; - rev = "82b66de274b0405fad8affcc21fcfec62655c266"; - sha256 = "0mfh1xscs1jn2fmzsq4cz57slicyvri83h1f7i3fwlmm1jw6l2nd"; + rev = "2408fb2c163aef22857645b58537879562373fbb"; + sha256 = "1cffcrmz72cn9sd7yl5z4r9yqzavh9dd9pjhxyjy80g5f0ryxc93"; }; }; @@ -380,12 +380,12 @@ let coc-java = buildVimPluginFrom2Nix { pname = "coc-java"; - version = "2019-10-31"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-java"; - rev = "77f7ecd8e6cc0af7a0cf293616b9f66a61a41f44"; - sha256 = "13qhw4gdl5p4imzmgickay6lc4hlnw5fsc46zw5qyqq7p88wgym9"; + rev = "4be4a57ad8f888ef92974ccb6e685358498863f1"; + sha256 = "15175bphaiih5j63bigj5sblcyqjj68g3k81wn7dwgwdpglf1mwf"; }; }; @@ -413,12 +413,12 @@ let coc-lists = buildVimPluginFrom2Nix { pname = "coc-lists"; - version = "2019-11-25"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-lists"; - rev = "c3d8bca71ba4cbf6eefdd24e77e62b595dcff856"; - sha256 = "0djmzw782m8vy3sfff3gnnib4iz3wilvjv4hagv7mhzcf2lzswsb"; + rev = "6dde4a564e33251d6745631fcf3168663cad7551"; + sha256 = "1w6cln4ac6df4ka7q4wkv303sh5bmgfzl7gck2v2n5fff7yhrqxq"; }; }; @@ -435,12 +435,12 @@ let coc-pairs = buildVimPluginFrom2Nix { pname = "coc-pairs"; - version = "2019-12-02"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-pairs"; - rev = "97a757cadecabd5a1bf0ed0eb831535d7011ecbd"; - sha256 = "0ygsiplb4slw7vf72njiy3cxslflnihr3qfi9i802dc9p02w4sl8"; + rev = "08ad1b1565960b41005bedbbd051f90c8edacc3c"; + sha256 = "0wfjs9hj11b0zfryfa2jnclgx4sfml9wvpjbwdqhhzz20ahc1jsh"; }; }; @@ -468,23 +468,23 @@ let coc-r-lsp = buildVimPluginFrom2Nix { pname = "coc-r-lsp"; - version = "2019-07-27"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-r-lsp"; - rev = "261e14c4d80c3302dda0d7b51c45637e3390fe76"; - sha256 = "1r4z8aiw8s66crrg9n26s93wpync7p6p3jwm32m8anvp1swkqp6b"; + rev = "a1b97e36c601975a8d730b6965f25592b1ecd1e7"; + sha256 = "04g1kbgm8p0asrsibmg4w6wj8i2xzwc70g7rkcs2bj3pakbkvws6"; }; }; coc-rls = buildVimPluginFrom2Nix { pname = "coc-rls"; - version = "2019-11-23"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-rls"; - rev = "1c7df237f76a50f25e8bbe3d8bec897991ca86b2"; - sha256 = "0q9i1lz4id9c3d4lch3fxkh8qg9v59vh3kin9h2qdnp3xwgfcvjr"; + rev = "c899418e8fae4a8c3eb15fee48513ae050b11d60"; + sha256 = "0sipvs8r8i239l2334k4qnhwpaijwd524q598rp4ma34ry42c2xl"; }; }; @@ -501,12 +501,12 @@ let coc-snippets = buildVimPluginFrom2Nix { pname = "coc-snippets"; - version = "2019-10-24"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-snippets"; - rev = "1294af604d65b66bac4ff05e159dc0bd0adb8710"; - sha256 = "093q9gx7fkahyk082gkawgvakzimvhhxazxhrdvmzsqs07yjxjmc"; + rev = "3ffd09dad94f6f41dd03cf3cec2a6b92a7028702"; + sha256 = "1qrkgva9yjjbjyflwaqfk84ia2vd5956ikjkmjfhd3gd52kh7hlg"; }; }; @@ -534,12 +534,12 @@ let coc-tabnine = buildVimPluginFrom2Nix { pname = "coc-tabnine"; - version = "2019-09-12"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-tabnine"; - rev = "cb787892b860a53fea65954b4afa32331ab17851"; - sha256 = "0c7hk8alggvz837w48fqiz3d01z56pxg2qss13qpp01kvvw12np6"; + rev = "f72b4f47109918cc6ad43b42ed566bec61feff8e"; + sha256 = "1jaj6qsascdpdyz0g8yvi7bcxf4jwcrb0766x4dsmfk9r7prxifl"; }; }; @@ -567,12 +567,12 @@ let coc-tsserver = buildVimPluginFrom2Nix { pname = "coc-tsserver"; - version = "2019-11-23"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-tsserver"; - rev = "4f493d6c35bfef71ec21e8db648bcabda5f9ad21"; - sha256 = "1n1b9ss5cjmn5vazfmy97x88s4nqw6f2mwvnqbnvx3cjrpwvyjy6"; + rev = "1f76767ffb0c79a8917b122c8091dbcdf71aa824"; + sha256 = "0p6pkhq4y69ib408g2r3a20ycfh8yyr8a5jld9snc1jpb8vi0m1l"; }; }; @@ -622,12 +622,12 @@ let coc-yank = buildVimPluginFrom2Nix { pname = "coc-yank"; - version = "2019-11-23"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc-yank"; - rev = "1d145660c81cf4f160965feb12ea69129d1cce3e"; - sha256 = "1sdpkr1rkvqaiixiddd5a0095di071nxr2gvnikb4pnzrknacngk"; + rev = "79c5a97c9b7122180b869f90f7f011934f3ae8f5"; + sha256 = "0dqz759aw0zlmgwrkv8ia45sdl27hb63ilawm9awzbl99w02psjf"; }; }; @@ -733,12 +733,12 @@ let csv-vim = buildVimPluginFrom2Nix { pname = "csv-vim"; - version = "2019-06-04"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "chrisbra"; repo = "csv.vim"; - rev = "f8d24584b01cc72e1a3bee640099a7d9bae98102"; - sha256 = "112spld65z56zbgd0zm2p1psc8g728pbd8gig0az1lnbxp3pl3jc"; + rev = "012cd2637d48aa33541078451d70d66930e03e0f"; + sha256 = "1gaqxhpzskcc28qma6vcjwig8v3q3a8sf7b2ckm14i7cb4c1lyh5"; }; }; @@ -788,12 +788,12 @@ let dart-vim-plugin = buildVimPluginFrom2Nix { pname = "dart-vim-plugin"; - version = "2019-12-02"; + version = "2019-12-03"; src = fetchFromGitHub { owner = "dart-lang"; repo = "dart-vim-plugin"; - rev = "917d0fe8670a5f3fcbd3ac12fbe5c10c8390ebd0"; - sha256 = "17fhq8vinmb0fxlyj45d2yyj39wapfy4cb4smmzzvx5hyhz3kj4x"; + rev = "ff468225ce2c8834b944ba6e040fe18a28a67cff"; + sha256 = "1h4yw71dj67q57d7iiw22silcmji5ibp4bj18kgm0gvwa53hy7hh"; }; }; @@ -843,12 +843,12 @@ let denite-nvim = buildVimPluginFrom2Nix { pname = "denite-nvim"; - version = "2019-12-01"; + version = "2019-12-16"; src = fetchFromGitHub { owner = "Shougo"; repo = "denite.nvim"; - rev = "31591499e27176c04b1605878755a121a0ff6fb6"; - sha256 = "0sf0a1wabq2f566nrwyapmz88m2bi2irprj5cyxlmlfypmgd4dhk"; + rev = "35ceadf33e1248caead987fc83f01336b81d98fb"; + sha256 = "1bazm1n2hqgg13yp5gywzghq310qhkbfqg1v42lyvc0gax8dngzj"; }; }; @@ -899,24 +899,24 @@ let deoplete-go = buildVimPluginFrom2Nix { pname = "deoplete-go"; - version = "2019-12-01"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "zchee"; repo = "deoplete-go"; - rev = "45ab448ad0bdd19a6f13ce691a5ce3c0c381ee9e"; - sha256 = "132wkvh62zhpiv37576k0a8akm90x40dq0sr7rc9q24cq5lym7rx"; + rev = "dffbe97e48e09e9e1cd3c5fed7365b8117e2df25"; + sha256 = "12p40sr6r9l7ngqynylffpms3cznym12djgbm4448kqcymj2imnz"; fetchSubmodules = true; }; }; deoplete-jedi = buildVimPluginFrom2Nix { pname = "deoplete-jedi"; - version = "2019-11-10"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "deoplete-plugins"; repo = "deoplete-jedi"; - rev = "f442e98c6c81649985f1cfc735fb4d25f3e27010"; - sha256 = "04g5vfzxyjddr6dhpm48jki0llxvb9smj1qxvk9d7j8n005bdlcx"; + rev = "7990447a308c6c5839ada856f31a7dd3e34f20a4"; + sha256 = "1570k79ihz6kif85ichdgdnbipbdkqb5ks8izhqppb68lajyjvd2"; fetchSubmodules = true; }; }; @@ -932,14 +932,25 @@ let }; }; + deoplete-khard = buildVimPluginFrom2Nix { + pname = "deoplete-khard"; + version = "2019-09-02"; + src = fetchFromGitHub { + owner = "nicoe"; + repo = "deoplete-khard"; + rev = "27221723a3bb8e480ff8cbe7f4be9ff38c076bf7"; + sha256 = "0g7sysm5lb8fpgagfg4565fz4rn16djdc4m2213ryq1s3crx40gw"; + }; + }; + deoplete-lsp = buildVimPluginFrom2Nix { pname = "deoplete-lsp"; - version = "2019-12-03"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "Shougo"; repo = "deoplete-lsp"; - rev = "dbac6111ae250e845070075f63a3d81fd6320815"; - sha256 = "1p55jk21l6qd16vh0yh0zilxqz8dpksis1w7ildjwhd5f8b8ach0"; + rev = "ca4018c69aca115033f3e3b5408331e76ff64cd0"; + sha256 = "0k3vgikvjapqniz0cmnhjx4ds5dn4kscd443sf2x2nd6ppa6fd6j"; }; }; @@ -967,34 +978,34 @@ let deoplete-ternjs = buildVimPluginFrom2Nix { pname = "deoplete-ternjs"; - version = "2019-11-22"; + version = "2019-12-06"; src = fetchFromGitHub { owner = "carlitux"; repo = "deoplete-ternjs"; - rev = "ca0ee77276bc688f847b566d64b32e4bb62691d8"; - sha256 = "0980fwr931dqyp032gcg4mwk2iv3inywa8w3m73zcr082xc0crp7"; + rev = "b94b24677daa095f980f31017caabd4fe051635f"; + sha256 = "1vi9y5kkiq3cmainqkdqn4hibnws0bs0zzg1nsx7pary9jfcmmra"; }; }; deoplete-nvim = buildVimPluginFrom2Nix { pname = "deoplete-nvim"; - version = "2019-12-02"; + version = "2019-12-18"; src = fetchFromGitHub { owner = "Shougo"; repo = "deoplete.nvim"; - rev = "f478a7b587dc2cb676fa1845d517aa0e7ccb8867"; - sha256 = "1wh6s18sn8rpc51zfn8yhz8fzkyz50b9h8k9limrqvlm538c72ys"; + rev = "18681650e81e809cd56e1006cf92cd7f9108266b"; + sha256 = "0rlh97bdmiagrxs9gqjvrimpqcj9w0ys77l0kyxb111zcgcr8s9s"; }; }; dhall-vim = buildVimPluginFrom2Nix { pname = "dhall-vim"; - version = "2019-05-01"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "vmchale"; repo = "dhall-vim"; - rev = "20d2fa23dddc11d694d62c957e4aa7287dba63d3"; - sha256 = "0718acz3qwrnjy1d76bar825dhbjj7mm5vrkgwxhyvdljx5w0hxs"; + rev = "5be708edaa89c93a585ed0ba04339c4f857dae3a"; + sha256 = "02s2wwd07qr2396hy3j3nw9f39ymahr9gpfsidrx4f1l4yb235in"; }; }; @@ -1022,23 +1033,23 @@ let echodoc-vim = buildVimPluginFrom2Nix { pname = "echodoc-vim"; - version = "2019-10-13"; + version = "2019-12-08"; src = fetchFromGitHub { owner = "Shougo"; repo = "echodoc.vim"; - rev = "dcbeba8ce075e3b6afc0422bbb339ef953582347"; - sha256 = "1y07a42a976z5cvkkjg6sir0vi7xdmk97bzyc2qvpx16gvqby6a2"; + rev = "e20bff5f3ef4ea29b64f386fa1994281832863d0"; + sha256 = "15xsin3wv7gba0wd7766ylgl9k32xzk0crv3liqmxsn5kgggkcxa"; }; }; editorconfig-vim = buildVimPluginFrom2Nix { pname = "editorconfig-vim"; - version = "2019-11-28"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "editorconfig"; repo = "editorconfig-vim"; - rev = "2ad3d7882d2e9622a7fdc1a5ba1c5d0064d89472"; - sha256 = "00cyvjzn2sr49fvjfsxv0rj7kmdr2m2xlcpqvnfamh6l19nagb35"; + rev = "53c56fcf358ca36b00b9cbf7dd70642c8922fdd0"; + sha256 = "1i0sk2s10ac5lagvn74m21lxsss1h4nfnn51lxnaflqbvlba4rln"; fetchSubmodules = true; }; }; @@ -1090,12 +1101,12 @@ let falcon = buildVimPluginFrom2Nix { pname = "falcon"; - version = "2019-11-29"; + version = "2019-12-14"; src = fetchFromGitHub { owner = "fenetikm"; repo = "falcon"; - rev = "4d34d3a44f7ee234460fcd8d543e5ba55b6b36e6"; - sha256 = "0llck06cpjjlfi4ga420z64fq064n0ykb9hh6dygklnnvkhdgb92"; + rev = "55ef64a057025209c48905df06f725430e63542f"; + sha256 = "07qca1xmwaak45ccgv5vg69s3vwl1p5h9r2agh0aw30qw50jvkkw"; }; }; @@ -1201,34 +1212,45 @@ let fzf-vim = buildVimPluginFrom2Nix { pname = "fzf-vim"; - version = "2019-11-24"; + version = "2019-12-18"; src = fetchFromGitHub { owner = "junegunn"; repo = "fzf.vim"; - rev = "65edb6ad99b51514aaf29afc25e35ce5f05281ba"; - sha256 = "1d40whzc21c4zbzssjwvhzddyb0a106ib8r4zzzdd61s1935z4xr"; + rev = "f71f4808d966da8be760f94fda131bc7d29f7d8f"; + sha256 = "1l34yz0cwgxsacscmasj634jg6hfhpial4m1a7j9c907ljdkabpr"; + }; + }; + + gen_tags-vim = buildVimPluginFrom2Nix { + pname = "gen_tags-vim"; + version = "2019-06-28"; + src = fetchFromGitHub { + owner = "jsfaint"; + repo = "gen_tags.vim"; + rev = "208cd0490547bc8f7615eea1b26e4635d2e60a96"; + sha256 = "00s1kxi1bsvz06z7x78kls0k6ncnbqdyz14fvdxxq82f6s1kdvdw"; }; }; gentoo-syntax = buildVimPluginFrom2Nix { pname = "gentoo-syntax"; - version = "2019-11-27"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "gentoo"; repo = "gentoo-syntax"; - rev = "c7ab3c0f6efbe68e864273ad460ab06905930bd0"; - sha256 = "1h46s31miyd3j8shmrs61phkljj7qp9bkclcx1l0yd4cppm3vi06"; + rev = "946aac94d5690e9ca1ca2db21a254fea56e45b2b"; + sha256 = "1q1rq1rxxq5hyglz90d7vd1m6az12lr2wz9aafn6zir68n3ak0lj"; }; }; ghcid = buildVimPluginFrom2Nix { pname = "ghcid"; - version = "2019-11-25"; + version = "2019-12-14"; src = fetchFromGitHub { owner = "ndmitchell"; repo = "ghcid"; - rev = "bd77010189fa5f14f9e06a0f71bb2831b9d5b4a6"; - sha256 = "0m1hxwri2imgjywrc9l1s8bnr38dbsfz8zxw228yknq392jpvlyk"; + rev = "723054642faf15082bbad6a0d6db921918e5db61"; + sha256 = "0ln5y7jfd4m59ci39zffjmzi9bda0bck7mkxk0i5fyp4whp8jqdr"; }; }; @@ -1311,12 +1333,12 @@ let gv-vim = buildVimPluginFrom2Nix { pname = "gv-vim"; - version = "2019-11-29"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "junegunn"; repo = "gv.vim"; - rev = "f12b8b80897c1214327e6075abc007ec6e55a691"; - sha256 = "0fb0zsmpx1vbdfh3d04dpgy2gkd4wkdn05jflcpr5cyf50zr1z9y"; + rev = "a18f4465974dfbd53f1ea33bfbbcc8a32baf1b4b"; + sha256 = "1b4y39zqjggqw6sybmr73di3grhnk19xb5jvyckjb43rp8nxrr00"; }; }; @@ -1465,12 +1487,12 @@ let jedi-vim = buildVimPluginFrom2Nix { pname = "jedi-vim"; - version = "2019-10-20"; + version = "2019-12-08"; src = fetchFromGitHub { owner = "davidhalter"; repo = "jedi-vim"; - rev = "08f13af066fad3a60cf241b37ac1878b8cfafa46"; - sha256 = "0ghdbxmmw1s67vb4l4ap6n6dy69lpp8k1sln27abxhympi2fs2dg"; + rev = "c80a08d9835565bb8988d6314dfec616f70c53da"; + sha256 = "0s86i6s0qwghcfb7a3mxy2cbzh001hw860dsaaf2jprnwsvs2p1q"; fetchSubmodules = true; }; }; @@ -1609,12 +1631,12 @@ let lh-vim-lib = buildVimPluginFrom2Nix { pname = "lh-vim-lib"; - version = "2019-12-03"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "LucHermitte"; repo = "lh-vim-lib"; - rev = "83a7693d7d078163d7959b279981aa59922452bd"; - sha256 = "1ks32izmibrkrsxnqc2ds961l5f3s06avr2vfp0q7433hbzm68hl"; + rev = "12388bb5ce5f5a16dc55dc22b80d7a410410b479"; + sha256 = "1k7l8sq6jcl0a6yk68ch72w20rhwi26fhrp0yvvvim0krs0yr068"; }; }; @@ -1631,12 +1653,12 @@ let lightline-vim = buildVimPluginFrom2Nix { pname = "lightline-vim"; - version = "2019-11-10"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "itchyny"; repo = "lightline.vim"; - rev = "e6f282f5e9ae931f0b404dd15aab2e5e249ae092"; - sha256 = "0ymb55gln97xzq94slghrmyrvn10jnh6547ci44gw1lq655c7wvb"; + rev = "ef6df46efe5ac5289f084045e57c492205bd08b5"; + sha256 = "01nrkjh18qd65kbnrw9s2kdb2ml5a7648zvqzyjxw1mcqpw57838"; }; }; @@ -1829,12 +1851,12 @@ let neodark-vim = buildVimPluginFrom2Nix { pname = "neodark-vim"; - version = "2019-11-15"; + version = "2019-12-04"; src = fetchFromGitHub { owner = "KeitaNakamura"; repo = "neodark.vim"; - rev = "ab86163fed0a2c2b776aff463745e792fbed01d6"; - sha256 = "0mv3vrqly1zgjy8knb87nhlhw4z2xyxzwfisqw6npi738xc612pz"; + rev = "44919aa0bebfa60e93e653fdd2a81d1c75c2e721"; + sha256 = "1wz9ygfdg59jwi19l9njcxknf77azlx5nkf5q0ghk6zyv1mqwvc1"; }; }; @@ -1895,12 +1917,12 @@ let neosnippet-vim = buildVimPluginFrom2Nix { pname = "neosnippet-vim"; - version = "2019-11-07"; + version = "2019-12-12"; src = fetchFromGitHub { owner = "Shougo"; repo = "neosnippet.vim"; - rev = "b8350cbbcdc951e1bac962f8339b011e2632d03f"; - sha256 = "11k3a8qgkl5wrk0wxhpnsvpcf5ymbb4kmnlp0k253ga6yhlxspmx"; + rev = "84057dd1dd28e1198d0b2777301ef6cafd8f2cef"; + sha256 = "164077vmqf4kcj0kn5c027faa4fjzfdbl1cz4j45dxpbak36hy6w"; }; }; @@ -1917,12 +1939,12 @@ let neoterm = buildVimPluginFrom2Nix { pname = "neoterm"; - version = "2019-11-11"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "kassio"; repo = "neoterm"; - rev = "18e7924ac96fb59a2a88c5a5a9ac1a7ec2fda297"; - sha256 = "0cn158gngglll23vfyk2bpcvw606xg0lj39yzn8pnl2gfg3476fs"; + rev = "9f0e71200274fc7906df1284d18d43c127214c2c"; + sha256 = "0shg7a66w8l6g872fgpf59sialc8gs3nx9h1awgngy0kk0m17ilq"; }; }; @@ -1950,12 +1972,12 @@ let neoyank-vim = buildVimPluginFrom2Nix { pname = "neoyank-vim"; - version = "2019-03-27"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "Shougo"; repo = "neoyank.vim"; - rev = "6a41fd651c00b1ff6a6298cb2be088e8d27d3629"; - sha256 = "1p084xbycwkghfih41z1sc6nn2xi7471vj8zgc9jgw0qkxbmbcnn"; + rev = "1829c6e426f829edea46660d0db08d4488010fcd"; + sha256 = "1y6fvxqpj3rwf1fmjib177lqzh3z7syp7bccn79g1j8177m515w6"; }; }; @@ -1972,12 +1994,12 @@ let nerdtree = buildVimPluginFrom2Nix { pname = "nerdtree"; - version = "2019-11-22"; + version = "2019-12-16"; src = fetchFromGitHub { owner = "scrooloose"; repo = "nerdtree"; - rev = "82b1649f2e1c79ff17730fe0a3750bbec203dd29"; - sha256 = "07viagjyd5bdnal7m6k0yschdnr2yxmxcg7zlgz7s7inn80blv79"; + rev = "1ab85e33bef8763a618c505ee5a0611519f81e5a"; + sha256 = "1fxbl06pqm1zay0lbg9q6qq21rbcbpmbn53kfw86qyqj71rayd01"; }; }; @@ -2005,12 +2027,12 @@ let nord-vim = buildVimPluginFrom2Nix { pname = "nord-vim"; - version = "2019-05-25"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "arcticicestudio"; repo = "nord-vim"; - rev = "9f7ce848723f69e33792e5606091bbfd5739d253"; - sha256 = "1n6kdnll5jh92kfbwwm8544mpp7c2awqsaps91agqjd3nwa5x27x"; + rev = "f06189a4c054fe8c22e46aca4d451e03456f2283"; + sha256 = "0gk4zq0gz3nnwfkldswg9bjpk0gf6d6mgfzcgvj0pnlbja6ass81"; }; }; @@ -2234,14 +2256,25 @@ let }; }; + quick-scope = buildVimPluginFrom2Nix { + pname = "quick-scope"; + version = "2019-04-22"; + src = fetchFromGitHub { + owner = "unblevable"; + repo = "quick-scope"; + rev = "994576d997a52b4c7828149e9f1325d1c4691ae2"; + sha256 = "0lr27vwv2bzva9s7f9d856vvls10icwli0kwj5v5f1q8y83fa4zd"; + }; + }; + quickfix-reflector-vim = buildVimPluginFrom2Nix { pname = "quickfix-reflector-vim"; - version = "2018-08-12"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "stefandtw"; repo = "quickfix-reflector.vim"; - rev = "c76b7a1f496864315eea3ff2a9d02a53128bad50"; - sha256 = "02vb7qkdprx3ksj4gwnj3j180kkdal8jky69dcjn8ivr0x8g26s8"; + rev = "8e9c05a110b80ab66fc8bc3d5fe9e6fa168aada6"; + sha256 = "1i8453z3s0xmbmbzk3kpxwvd42ar9v2m2gjqic9k7njpxw87czvs"; }; }; @@ -2302,12 +2335,12 @@ let readline-vim = buildVimPluginFrom2Nix { pname = "readline-vim"; - version = "2019-08-24"; + version = "2019-12-12"; src = fetchFromGitHub { owner = "ryvnf"; repo = "readline.vim"; - rev = "40964933819e2a719e6e34adcf3e8b2210c5c6ce"; - sha256 = "1jc8lzl49nl7r3v1b7fk6zpiba41h51qsi2w4lhf8v6lnzbazii7"; + rev = "9711f3c7c1d295e775750d7421060d74ee1b56e3"; + sha256 = "0zvavhc8033isdn7gdfla5kwif40rkn9p4zmkvwy423dpb3432h2"; }; }; @@ -2412,12 +2445,12 @@ let seoul256-vim = buildVimPluginFrom2Nix { pname = "seoul256-vim"; - version = "2017-09-05"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "junegunn"; repo = "seoul256.vim"; - rev = "1475b7610663c68aa90b6e565997c8792ce0d222"; - sha256 = "03gqw14f5cirivcg1p06g500ns066yv5rd0z3zikvn4ql7n278dk"; + rev = "b68f4032c49b64065072b449dc0f0f1f30616d8d"; + sha256 = "0bxw0ks5gndzrgixa6xqhnf78b7n75w2jnc3s6bv75lz0fn0gypx"; }; }; @@ -2454,6 +2487,17 @@ let }; }; + smartpairs-vim = buildVimPluginFrom2Nix { + pname = "smartpairs-vim"; + version = "2018-01-01"; + src = fetchFromGitHub { + owner = "gorkunov"; + repo = "smartpairs.vim"; + rev = "dc754c29509b1a942552b3cfa348e4aae209322c"; + sha256 = "1pyynwz7wfbgccdxsyggzl0301qjj3wgyymah5spx8b3s42a6slj"; + }; + }; + sourcemap-vim = buildVimPluginFrom2Nix { pname = "sourcemap-vim"; version = "2012-09-19"; @@ -2520,6 +2564,17 @@ let }; }; + split-term-vim = buildVimPluginFrom2Nix { + pname = "split-term-vim"; + version = "2018-09-30"; + src = fetchFromGitHub { + owner = "vimlab"; + repo = "split-term.vim"; + rev = "a4e28cab77ad07fc8a0ebb62a982768c02eb287c"; + sha256 = "12vrmbq1r8d6sgyxjwi0s856n1v4vjhrf8wpwq6l4ydmk1bnvjkb"; + }; + }; + starsearch-vim = buildVimPluginFrom2Nix { pname = "starsearch-vim"; version = "2014-09-21"; @@ -2555,12 +2610,12 @@ let swift-vim = buildVimPluginFrom2Nix { pname = "swift-vim"; - version = "2019-07-09"; + version = "2019-12-05"; src = fetchFromGitHub { owner = "keith"; repo = "swift.vim"; - rev = "d3d66151598b5d6dda159524baa9c66b3d1bf5ad"; - sha256 = "0pq4nwdhnw3qzz3xaz9fpbf3p0l6vrmjkqj4lrfymafbmxc94j6w"; + rev = "245e5f7aae6f1bc96849a0a01a58cb81cf56e721"; + sha256 = "0hj7ln0qvfpb0pmvkzj21zd8a2zribdahwwl4rn1yn8skclcq149"; }; }; @@ -2632,12 +2687,12 @@ let targets-vim = buildVimPluginFrom2Nix { pname = "targets-vim"; - version = "2019-10-27"; + version = "2019-12-08"; src = fetchFromGitHub { owner = "wellle"; repo = "targets.vim"; - rev = "be309773998ca729213206950109a758be15b556"; - sha256 = "0ravnykqlhw09cz5yyjm6k4kbikx39jagmmpj87q31pgf1rzycmx"; + rev = "8d6ff2984cdfaebe5b7a6eee8f226a6dd1226f2d"; + sha256 = "192wq3x64x11nm2jhs4yrc627b0lh002dfnj72xrc7jak9vbdps9"; }; }; @@ -2765,23 +2820,23 @@ let typescript-vim = buildVimPluginFrom2Nix { pname = "typescript-vim"; - version = "2019-06-23"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "leafgarland"; repo = "typescript-vim"; - rev = "5a319ea5504e18215d155576c78d1b7fb8e22c8f"; - sha256 = "1hz42blc1sshkms9ramdhzwnphqs26p83q8smw5y14blp1zdb628"; + rev = "2ca6afd1c05e89164bb29aaad82da35d5cf582a3"; + sha256 = "0jvyi4gy9pc2kd0b1yc118f16p1qrjphxvpa0bl7q2rvyk49742s"; }; }; ultisnips = buildVimPluginFrom2Nix { pname = "ultisnips"; - version = "2019-11-19"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "SirVer"; repo = "ultisnips"; - rev = "c309637e0243b71f7e3265ebe3cffdfe9674cfbc"; - sha256 = "1q2miwd56k2l7lfwmw3khqnfry9izaca91dcf32p0xp06bc3ah28"; + rev = "3a8b0548b3efd01bff0393f8f32228786149806c"; + sha256 = "10mnhlkxrzl008q7cfv3j78p1bd1dqmprpnmcz8nc6mmkldnflri"; }; }; @@ -2864,12 +2919,12 @@ let vim = buildVimPluginFrom2Nix { pname = "vim"; - version = "2019-10-21"; + version = "2019-12-06"; src = fetchFromGitHub { owner = "dracula"; repo = "vim"; - rev = "c8c0a9325407c487fd702eca39d987d67123c98b"; - sha256 = "054q6lk91x7dghvvzb51j7923bdy317iya5msv9as76nwzdrk5dp"; + rev = "2a1f03757eff82d07f64d45dad4af1a805492a67"; + sha256 = "1ahlpwqf61rr6y23fk9pvnh8drkhv7v82a3r3w07p65mv0mfk958"; }; }; @@ -3095,34 +3150,34 @@ let vim-airline = buildVimPluginFrom2Nix { pname = "vim-airline"; - version = "2019-12-02"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "vim-airline"; repo = "vim-airline"; - rev = "2daef1bcb8b240c303ef34c3348ee1af071963b4"; - sha256 = "1q806acihhv4yshd8pna7gs383yxs7mw2rnqm4c016sqhb20ba1i"; + rev = "98326670b604f522741b02baee82bf25141fbbc4"; + sha256 = "0n7avla6z8dnixbr1rc505yyb4bfc3sr69wnv6fj15j4kkx4k319"; }; }; vim-airline-themes = buildVimPluginFrom2Nix { pname = "vim-airline-themes"; - version = "2019-12-02"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "vim-airline"; repo = "vim-airline-themes"; - rev = "fe89bb50a15492c76a9fc55e0cff410f3d5f8b0f"; - sha256 = "01qplr1md3vzwrd7as2dkm8f4qvx4qcpgaw3q9i7s2i4yv80qnn8"; + rev = "1eecd5b1c02c88ad2f8303757f453e2d7f0bd414"; + sha256 = "08rjqjl0v5nsq8nf7ajv60jx41pmc5ym8mjbndlycz22hrsw8aq8"; }; }; vim-android = buildVimPluginFrom2Nix { pname = "vim-android"; - version = "2019-11-01"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "hsanson"; repo = "vim-android"; - rev = "928a7ba76ee7b48a715b397543f21ee28a9959da"; - sha256 = "1cdjjyzmclzc32i1wcc5k67laz75yvi4jj2yc1fxa95bbq9zi0h5"; + rev = "0849bcb6523d17a753fcaff8d40cbeed2d09cf65"; + sha256 = "1z3x72aprp950chk754h0qpf5lxh2svzk39flks5fanxaggkpkng"; }; }; @@ -3161,12 +3216,12 @@ let vim-autoformat = buildVimPluginFrom2Nix { pname = "vim-autoformat"; - version = "2019-11-11"; + version = "2019-12-04"; src = fetchFromGitHub { owner = "Chiel92"; repo = "vim-autoformat"; - rev = "4fb3ecc473093720f35d8d26ae8a8e46a445f116"; - sha256 = "199fpvfqbd1d4brxyy506j4nrp64wj6av2xh51a5q10dm84pddp9"; + rev = "354abcd3d533ba07eebc510102870d85d4e2c466"; + sha256 = "1hngbjj12q5v73smyhsay4irp3q71cxyc60n97ybfik5mmm455nj"; }; }; @@ -3447,12 +3502,12 @@ let vim-dirvish = buildVimPluginFrom2Nix { pname = "vim-dirvish"; - version = "2019-11-16"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "justinmk"; repo = "vim-dirvish"; - rev = "4d7b4d4e2db72e95ea03c6ef757b01cbc128179e"; - sha256 = "0ab7ivgkfaji0yl6mcx03nmr304vmdwxwiw0an94fa6wbhk0y9yl"; + rev = "9c12328df924ddb875ee1e5c9fc0f939b62d6a6c"; + sha256 = "1kpkwqrhix7whd00pcbanf3ij55x34cqc6qz3r2xshcmydk5vqxn"; }; }; @@ -3555,6 +3610,17 @@ let }; }; + vim-elm-syntax = buildVimPluginFrom2Nix { + pname = "vim-elm-syntax"; + version = "2019-11-28"; + src = fetchFromGitHub { + owner = "andys8"; + repo = "vim-elm-syntax"; + rev = "7ed55d9bc2c0cfd023d7cc6541634bcbf36430b5"; + sha256 = "1kq7qcw9l41q646a2ilwy94lj1qz9as14aqfmzkbi938yij18zpx"; + }; + }; + vim-eunuch = buildVimPluginFrom2Nix { pname = "vim-eunuch"; version = "2019-11-13"; @@ -3612,12 +3678,12 @@ let vim-fireplace = buildVimPluginFrom2Nix { pname = "vim-fireplace"; - version = "2019-11-12"; + version = "2019-12-15"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-fireplace"; - rev = "a74887f679916d428001dc48900b095f8720106a"; - sha256 = "0818wlnr5hphhp1bswd7k7fq344bhj9khf5v5c8ywi04m8p37v3p"; + rev = "63d7209ff4f17d4bdc30f3478986b5bd44a47a3e"; + sha256 = "1n0p70w0qmbxffchxsmklraxqrzg1q6bwnp4qhy0xjcz89p3fzx5"; }; }; @@ -3634,12 +3700,12 @@ let vim-flagship = buildVimPluginFrom2Nix { pname = "vim-flagship"; - version = "2019-11-13"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-flagship"; - rev = "d3e1b07a426b44cdf068d3fc4b7549cba2eb3358"; - sha256 = "095dz37qspjjg7sx22mmxnda6p592bp3bmnc59n0nan9g3zy8yk2"; + rev = "e522bd0ffb0e329f695ead7d4288a6245ff22410"; + sha256 = "0vqkdzd7b204kbinn12jk306kc9bn2f0yaifj49swd0g8hv6dk4b"; }; }; @@ -3700,12 +3766,12 @@ let vim-fugitive = buildVimPluginFrom2Nix { pname = "vim-fugitive"; - version = "2019-11-30"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-fugitive"; - rev = "671a85dabaed7e21aa7e435adfdad9b9461cb7d8"; - sha256 = "1k5qhdfnj84m8v3c2hm3ddqrdh2l3fs8hzk36qb83cjil24iz53w"; + rev = "b68b6d4329d9bee58a521e0ff8c6adbbc53915b4"; + sha256 = "1lrx2vk6bj10sy297mby4fqjrn09s7ghq2xjbp8z2ajww4pcxp05"; }; }; @@ -3777,12 +3843,12 @@ let vim-go = buildVimPluginFrom2Nix { pname = "vim-go"; - version = "2019-12-03"; + version = "2019-12-18"; src = fetchFromGitHub { owner = "fatih"; repo = "vim-go"; - rev = "d27aa72b206363ef5a2415c3eddbab6fbbcbd2c1"; - sha256 = "04p30ljbpz51hjf61nc3ixgvbndk9nzhck60bhd79js3s7sd35qn"; + rev = "9d912c9d908a45f8a583679753a480e6a0461da3"; + sha256 = "1z002n6mryhk2hi0arqyqaiayd6i14w2l5b2bmzj0g8vkk1kr41n"; }; }; @@ -3799,12 +3865,12 @@ let vim-grepper = buildVimPluginFrom2Nix { pname = "vim-grepper"; - version = "2019-11-19"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-grepper"; - rev = "d8fa51d4fa99221511dc8b9e2eb1cba23a9b0c20"; - sha256 = "1wb4g5g1phixqwpj9nd261f690ziimy80w12pjivrik20bj17ipd"; + rev = "dde6a660c7dd4e02b331da238ea477770073aca2"; + sha256 = "0c411yg2s6wb8141lqpgasg7iwgvfwy88z6l0c0gccmk8knypxhm"; }; }; @@ -4052,12 +4118,12 @@ let vim-javacomplete2 = buildVimPluginFrom2Nix { pname = "vim-javacomplete2"; - version = "2019-11-16"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "artur-shaik"; repo = "vim-javacomplete2"; - rev = "676fecd601e844bcd580aa806296dfe4de91a558"; - sha256 = "0ff3d1wsx47i9mim22j81r43z3n2c30ljw0fjicy43vb74wss873"; + rev = "dc7951895a98c49c39622f65cdd7b39374c348bc"; + sha256 = "1d8xiiwfg5wz57jyy7ahbi2bl5sjkhkpkqm2qbhsn7cd9vk36sxy"; }; }; @@ -4141,12 +4207,12 @@ let vim-jsx-pretty = buildVimPluginFrom2Nix { pname = "vim-jsx-pretty"; - version = "2019-11-19"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "MaxMEllon"; repo = "vim-jsx-pretty"; - rev = "8b96cea873612b35ddfd7aef4b6c21f991103f0f"; - sha256 = "18ilra7s29jl7k3nda2z3r7bvixk5b8bbfn9d3nvfz7l26n8s6i6"; + rev = "0d07dc85ba5a14b7e95f1f36539741d99c632bfb"; + sha256 = "1wxxln76mk5wd73pmaf67kv2q7gj6rb9zdfgx4hqx0jdcywhrjnw"; }; }; @@ -4262,12 +4328,12 @@ let vim-lsc = buildVimPluginFrom2Nix { pname = "vim-lsc"; - version = "2019-11-15"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "natebosch"; repo = "vim-lsc"; - rev = "7fa6a2db67d27782fedab751129249ab20ab1105"; - sha256 = "0lik69wyw7cpysck661pivcqiah6crw5isl5j5nfhhpf6mm7i5hg"; + rev = "0fd38b8a93ab16d380aed8467a5059e5b3932a2e"; + sha256 = "06jz7f5npwm2iknpfmzz5x8lw5377hzc5kpg6n5p2icjwzaha6mz"; }; }; @@ -4361,12 +4427,12 @@ let vim-mucomplete = buildVimPluginFrom2Nix { pname = "vim-mucomplete"; - version = "2019-12-01"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "lifepillar"; repo = "vim-mucomplete"; - rev = "92f0206dae54439bec6503c649263e38167011a9"; - sha256 = "1ygsb16ha7kxns1f1km7j3br9c0ylf8pan5z46bnmixcbvia53gb"; + rev = "137b7e5c671b4b376b2df7492c4023ac6e1439da"; + sha256 = "1pv19ylhifd32p8jb8rvbd8l5wik7349q4m4f8a8qycab2ba5xhv"; }; }; @@ -4493,12 +4559,12 @@ let vim-orgmode = buildVimPluginFrom2Nix { pname = "vim-orgmode"; - version = "2019-10-12"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "jceb"; repo = "vim-orgmode"; - rev = "5099025d0b632a5e56fa457f826153cd37c48d3c"; - sha256 = "145x60yxzxga92ix4pp0rac5r9r61jgqr8s0l991zz30jxcv1qy2"; + rev = "c6cd668ed13af85d8292b524f827e729bf70ea0f"; + sha256 = "1239c0yc51jyp5shwpx2j7kbsb63qj6zp3k2lirppy8c2lls4nsv"; }; }; @@ -4581,34 +4647,34 @@ let vim-peekaboo = buildVimPluginFrom2Nix { pname = "vim-peekaboo"; - version = "2019-08-11"; + version = "2019-12-12"; src = fetchFromGitHub { owner = "junegunn"; repo = "vim-peekaboo"; - rev = "9d3c7f39a6771496fac5f730ae7574bc57da21b4"; - sha256 = "0r61r0s01nn4n153k60dlhr3l0sfj0gcx4y5ry7cvixl85b6y505"; + rev = "cc4469c204099c73dd7534531fa8ba271f704831"; + sha256 = "11lgf60v2kj772d9azkfddypwidcgfps5mvnhmp4gg0fmfx12h99"; }; }; vim-pencil = buildVimPluginFrom2Nix { pname = "vim-pencil"; - version = "2019-11-22"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "reedes"; repo = "vim-pencil"; - rev = "9aead49ecfd0640e07fdf30fb149dc7d072051eb"; - sha256 = "189mqxsawdpb68vs9gpkh6flm00m3zhh744awwjd433dhyhz07fx"; + rev = "09458527601fdb2fbd174317bdddfb34e4c64e79"; + sha256 = "09b30cxlwbr9l07ya05is9q2y9vzbzhcc656nvjjzf968l496xr2"; }; }; vim-plug = buildVimPluginFrom2Nix { pname = "vim-plug"; - version = "2019-12-02"; + version = "2019-12-11"; src = fetchFromGitHub { owner = "junegunn"; repo = "vim-plug"; - rev = "93b702512d07bcad4c0d47913db587febe8cc054"; - sha256 = "0qfxrs3g45m7z36l6sad4yg6jfq60j9qknmmz4f2g40bs0vm1kdd"; + rev = "359ce90b9b37442974fd3ccd9279493d85efb3af"; + sha256 = "1dbdnyfzhfgn70jgcd0a079b76s4gdv9ykslmfiaiv7bvlmhs08s"; }; }; @@ -4625,12 +4691,12 @@ let vim-polyglot = buildVimPluginFrom2Nix { pname = "vim-polyglot"; - version = "2019-11-28"; + version = "2019-12-12"; src = fetchFromGitHub { owner = "sheerun"; repo = "vim-polyglot"; - rev = "15aeea662e0b08088ac7b6e3ee661c834e69106a"; - sha256 = "1x7xx12hdydn37hb2k0awzv4s00sb7zk09jixr9mjfrh2x7ywf1c"; + rev = "cea0d08a062478503814e51aa21c6486a0dd1b21"; + sha256 = "05vhwgq2kj3safjhnv0rl4fhcfszba02mbwnyrlq4ayyiyv3n7cc"; }; }; @@ -4669,12 +4735,12 @@ let vim-ps1 = buildVimPluginFrom2Nix { pname = "vim-ps1"; - version = "2017-10-20"; + version = "2019-12-06"; src = fetchFromGitHub { owner = "PProvost"; repo = "vim-ps1"; - rev = "0b2509f210f5dc73001fdcfe8fd7ac354b363388"; - sha256 = "0fkqd9xnr0310pmi5hjxfwh9x6b75z6q1w8qp1alm4qcv425q9rm"; + rev = "d11593b4a65551cc3391d36b088cc87a59c62da6"; + sha256 = "08d9mp6ig3vkvmynm6qfvb18hc128wwssffkwdd9xnqkr7c3dmlv"; }; }; @@ -4768,12 +4834,12 @@ let vim-ruby = buildVimPluginFrom2Nix { pname = "vim-ruby"; - version = "2019-11-06"; + version = "2019-12-08"; src = fetchFromGitHub { owner = "vim-ruby"; repo = "vim-ruby"; - rev = "d37f5a52a97239dcd503a3a84bb32dfc3200b5f7"; - sha256 = "158wdfkskxxqzjm0dls3sza4nfrp2dqxwsdiiqfhar4vm2n7x8yp"; + rev = "81f64ec3f33165159017f782bc8a1ce9f97348b4"; + sha256 = "0dja73g2mhbwnb29yqcwamwh77k8l3qqbmn25w9pa2mlnfkp9jy8"; }; }; @@ -4878,12 +4944,23 @@ let vim-signify = buildVimPluginFrom2Nix { pname = "vim-signify"; - version = "2019-11-12"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-signify"; - rev = "25f3d4b6faba8febfe67660194a966f3f27a2e9a"; - sha256 = "0szrwa2cbrvwnawgb5bwkpxms2djgz71b8ib5l2xaw7ds116wvi2"; + rev = "56db16f8d3825c4d066c2faf05315c2b208cd5f5"; + sha256 = "0alargsa6sxdxha6jshax7ff6jy8svzc9yxvsh83f8301zx9vmra"; + }; + }; + + vim-slash = buildVimPluginFrom2Nix { + pname = "vim-slash"; + version = "2019-08-28"; + src = fetchFromGitHub { + owner = "junegunn"; + repo = "vim-slash"; + rev = "31aee09b7ea8893a18fa34f65e63e364fc998444"; + sha256 = "0ifdd3yqbk8hdvdmr4k44967lyvjnv9ig3r2145wn1lab797sbl4"; }; }; @@ -4900,12 +4977,12 @@ let vim-slime = buildVimPluginFrom2Nix { pname = "vim-slime"; - version = "2019-11-01"; + version = "2019-12-13"; src = fetchFromGitHub { owner = "jpalardy"; repo = "vim-slime"; - rev = "93776ea69b99ad0ecd5291d8a5984386fd8ffa72"; - sha256 = "1izcb2iwlwxhzc048xwi9jxr3gqyy5kqysbd1358p39sfhfcdy4j"; + rev = "53c781b9532da50ab9d6ab1bbe640902b2629a0e"; + sha256 = "1cyi4v3rqf8ln0lz1rgzh1qpxw5mq3ihixx83qnrxn81nd1ivk2i"; }; }; @@ -4944,12 +5021,12 @@ let vim-snippets = buildVimPluginFrom2Nix { pname = "vim-snippets"; - version = "2019-12-01"; + version = "2019-12-12"; src = fetchFromGitHub { owner = "honza"; repo = "vim-snippets"; - rev = "a7a7d4d2dd252b71b904d362ba74572c660da67f"; - sha256 = "0ys0sczmjpc219hv2wwgcrkyiys21vk66i174axm147h33m3cm4f"; + rev = "3ba36bb710988349140138707731baeebd6337e4"; + sha256 = "19831g3b6cd5ws0zp6xp4aj110pzf6za3av9ac1s9dnpi97d37g9"; }; }; @@ -4999,12 +5076,12 @@ let vim-startify = buildVimPluginFrom2Nix { pname = "vim-startify"; - version = "2019-11-15"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-startify"; - rev = "a521559d7036c66a8d43287c5c17a48db771ac47"; - sha256 = "1gnjrixlkrrcxf291cwxiasl3yrnvc6bd56p8pa611z070253xlr"; + rev = "05122f08c6a553992f7b0a9ad88016a89f51548a"; + sha256 = "09kg1zf5lmwlksqz11scnjazg5d862fjip48qakjbabf66f23svs"; }; }; @@ -5076,12 +5153,12 @@ let vim-table-mode = buildVimPluginFrom2Nix { pname = "vim-table-mode"; - version = "2019-11-16"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "dhruvasagar"; repo = "vim-table-mode"; - rev = "5ec330d114bdc27d636ce16a6186013f121470df"; - sha256 = "168y5wbvhrislvj04g768mfhklczw7phmgf5am61gh4z2nsyw2lp"; + rev = "0af25d72ebc0271648c8f91c0ce5c59174d2761b"; + sha256 = "1wqfc8bilknz1j1spk3iag99hmz5f1w87v95rb3cyp46ymrf9dcv"; }; }; @@ -5109,23 +5186,23 @@ let vim-terraform = buildVimPluginFrom2Nix { pname = "vim-terraform"; - version = "2019-11-13"; + version = "2019-12-16"; src = fetchFromGitHub { owner = "hashivim"; repo = "vim-terraform"; - rev = "fd3374f1957d5611f0bc7dc2856a439c03d06ac0"; - sha256 = "12j95yj1sc61j66mrcbrm0q052rbs0rmsksfyvaxc8q5kxc4dvyz"; + rev = "bff65bf59401ef7d165637aedafe72f212ddf4c7"; + sha256 = "1jgzir5qn9v0ws6yb6d0hc3p859gy81x22wkqk58w55xxmfxd7am"; }; }; vim-test = buildVimPluginFrom2Nix { pname = "vim-test"; - version = "2019-11-25"; + version = "2019-12-07"; src = fetchFromGitHub { owner = "janko-m"; repo = "vim-test"; - rev = "3592eff62d38531acb2a948f0445463f27c5d801"; - sha256 = "1q41vp404n2pn65pg4br282wyimnfsrrhfkciwp0mhfp4ksn20mz"; + rev = "e9e824cf3f22fa1cddabb7ef739f2481436c3924"; + sha256 = "0nl1b3zzw3w413lmdl4fhm8ia079hr1rz1kpx7sf0i86lx1c0dcv"; }; }; @@ -5219,23 +5296,23 @@ let vim-tmux-focus-events = buildVimPluginFrom2Nix { pname = "vim-tmux-focus-events"; - version = "2019-04-19"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "tmux-plugins"; repo = "vim-tmux-focus-events"; - rev = "0f89b1ada151e22882a5a47a1ee2b6d6135bc5c1"; - sha256 = "0rx1615wlsl62y62l217vgjd5vjfzf3zjwq43fflpc6bixikqc6j"; + rev = "e80960715c09aef8ab9204848ed1683805a93a33"; + sha256 = "0ds6qw2i1r67jhxh9ff36al45bafsmbxxdc127l6iy2vl5wj0d3d"; }; }; vim-tmux-navigator = buildVimPluginFrom2Nix { pname = "vim-tmux-navigator"; - version = "2019-12-02"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "christoomey"; repo = "vim-tmux-navigator"; - rev = "b5ae5805db294a72380f77ee82592cd99246272b"; - sha256 = "0w8fn92k1p99wmhq4dv5w2fb97l0p8ay00qyzydm9lq87w06a939"; + rev = "8fdf78292bb3aed1c9de880be7e03efdbf23d306"; + sha256 = "0y92na4dcfcsj5zbs3m7y6csl3sd46a9968id78cdn9cgg8iwzac"; }; }; @@ -5263,12 +5340,12 @@ let vim-trailing-whitespace = buildVimPluginFrom2Nix { pname = "vim-trailing-whitespace"; - version = "2017-09-23"; + version = "2019-12-09"; src = fetchFromGitHub { owner = "bronson"; repo = "vim-trailing-whitespace"; - rev = "4c596548216b7c19971f8fc94e38ef1a2b55fee6"; - sha256 = "0f1cpnp1nxb4i5hgymjn2yn3k1jwkqmlgw1g02sq270lavp2dzs9"; + rev = "6b7cdecff252474fe560d32c6f05641f3c5952c7"; + sha256 = "0arv1hmlw7c1rlkc00hzjyg48pg8g4cc9q9l2hy8kpmsl037akm3"; }; }; @@ -5329,12 +5406,12 @@ let vim-visual-multi = buildVimPluginFrom2Nix { pname = "vim-visual-multi"; - version = "2019-11-29"; + version = "2019-12-17"; src = fetchFromGitHub { owner = "mg979"; repo = "vim-visual-multi"; - rev = "7c1934f91b33f64836d0e0d27e08481849831266"; - sha256 = "1ga0skivc5p09d29k4gx2gdisalcl9514062ckddphynqn69ghi9"; + rev = "9b06b851a7e822f3a2604a5d1505e387b62f3827"; + sha256 = "0g1wf5p905y653vl0cxb6idbr8panvj10hwz7hl50dybfc0zky7m"; }; }; @@ -5362,12 +5439,12 @@ let vim-wakatime = buildVimPluginFrom2Nix { pname = "vim-wakatime"; - version = "2019-11-28"; + version = "2019-12-05"; src = fetchFromGitHub { owner = "wakatime"; repo = "vim-wakatime"; - rev = "fd18019b94d97c2ded56f8cce6087d692e6a055c"; - sha256 = "0m3dp5m8fbb28b68kykcickgd79bwv7gg30w483ndh2bgjjahqn0"; + rev = "dfc57db34d641315ddf1880b27573dfa07a41872"; + sha256 = "05fhnw4jdi6wbf14zrmq6gvb7pqxhvmy65kij2zzf0nwyb8l1c09"; }; }; @@ -5406,12 +5483,12 @@ let vim-xkbswitch = buildVimPluginFrom2Nix { pname = "vim-xkbswitch"; - version = "2019-03-28"; + version = "2019-12-14"; src = fetchFromGitHub { owner = "lyokha"; repo = "vim-xkbswitch"; - rev = "3c968fd4fd83d3631dec4c0caf289c85917d8ca9"; - sha256 = "17ncq06al2pzqxpx45bmh4b66d48y3kklxcd1f80jfsp9hh5v0vm"; + rev = "b9839555f70d319b4e21fc7bc9b559d91cf1260a"; + sha256 = "1ql8yv8rxpr9j9phf4jddqs1j81vcb9gpp0p3fmy6f8nf4b26nvw"; }; }; @@ -5538,12 +5615,12 @@ let vimtex = buildVimPluginFrom2Nix { pname = "vimtex"; - version = "2019-12-02"; + version = "2019-12-15"; src = fetchFromGitHub { owner = "lervag"; repo = "vimtex"; - rev = "02829dee17a3d70889b5a0151a2f747754a0e2c4"; - sha256 = "0kkm18mi1am1ww3lb3xqr9v11s057drkv8wpq0l5vqr550iviail"; + rev = "7c08bf73aa15bc794c79b1e8750df3c18066c6fb"; + sha256 = "130x4nwp2wci67nf7v73r4b7xgmfgs18ls1ckyrsq54k16016dbz"; }; }; @@ -5693,12 +5770,12 @@ let youcompleteme = buildVimPluginFrom2Nix { pname = "youcompleteme"; - version = "2019-11-30"; + version = "2019-12-14"; src = fetchFromGitHub { owner = "valloric"; repo = "youcompleteme"; - rev = "1386c6b3fba94d93576cd344a1cd296c53ad7926"; - sha256 = "0y4ics5msz1lq3pzqspgf5zgzpqkimngvpzk0zpybs6idgxi05jz"; + rev = "25b620de35f45c046b220923a45c55ee062f9201"; + sha256 = "1c01w86rdhyasn56llhlrzszmvfgq40r7s7m8njbpiy30712dab2"; fetchSubmodules = true; }; }; @@ -5738,12 +5815,12 @@ let zig-vim = buildVimPluginFrom2Nix { pname = "zig-vim"; - version = "2019-11-11"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "zig-lang"; repo = "zig.vim"; - rev = "8c9c72cefdb2ad4e8c5d76ab3c9332d045426f9c"; - sha256 = "1lv0qc0r8f1vnq184gif753x024blnv33f9dkqvbi7mf22b3gz3f"; + rev = "65f71de21c31a0b7f7b09a62f865d1b61f9f71ed"; + sha256 = "0y0rfpsggl1a1h89zjzgpnx3vj244gmr3qwblsclh3hzf0sdav5r"; }; }; diff --git a/pkgs/misc/vim-plugins/overrides.nix b/pkgs/misc/vim-plugins/overrides.nix index f3f9b8825e6..a885dc163a1 100644 --- a/pkgs/misc/vim-plugins/overrides.nix +++ b/pkgs/misc/vim-plugins/overrides.nix @@ -14,6 +14,9 @@ # coc-go dependency , go +# deoplete-khard dependency +, khard + # vim-go denpencies , asmfmt, delve, errcheck, godef, golint , gomodifytags, gotags, gotools, go-motion @@ -49,16 +52,16 @@ self: super: { }; LanguageClient-neovim = let - version = "0.1.154"; + version = "0.1.155"; LanguageClient-neovim-src = fetchurl { url = "https://github.com/autozimu/LanguageClient-neovim/archive/${version}.tar.gz"; - sha256 = "03sp643nihj9p2s9cx2dcazhz68s30qx7igqprgsmr1040rhg2py"; + sha256 = "0v9n450iwgvm1d4qwv742bjam3p747cvyrkapkgxy7n1ar8rz50i"; }; LanguageClient-neovim-bin = rustPlatform.buildRustPackage { name = "LanguageClient-neovim-bin"; src = LanguageClient-neovim-src; - cargoSha256 = "1bvbls2l1xa0s3k11crvd98il4i20z5sn0hqmsc1b915k03qq4zj"; + cargoSha256 = "139sj1aq0kr4r4qzhgcn2hb4dyvp5wxjz7bxbm0bbh9bv2pr98jq"; buildInputs = stdenv.lib.optionals stdenv.isDarwin [ CoreServices ]; # FIXME: Use impure version of CoreFoundation because of missing symbols. @@ -115,12 +118,12 @@ self: super: { # NB: Make sure you pick a rev from the release branch! coc-nvim = buildVimPluginFrom2Nix rec { pname = "coc-nvim"; - version = "2019-11-29"; + version = "2019-11-30"; src = fetchFromGitHub { owner = "neoclide"; repo = "coc.nvim"; - rev = "d566fa03807d8d86ce9302680d135198a36c7d4d"; - sha256 = "0m355w837f61jfpjrhi3h47z7vq16g8yai8kd82v1h71ns5fw9gz"; + rev = "42a45c639e2c43f9f1795c3804787c6a686781c0"; + sha256 = "0bny7s7scbls01jkvrwcd516py09lp0vkr65p1ik4282blyxyy6s"; }; }; @@ -174,6 +177,17 @@ self: super: { ''; }); + deoplete-khard = super.deoplete-khard.overrideAttrs(old: { + dependencies = [ self.deoplete-nvim ]; + passthru.python3Dependencies = ps: [ (ps.toPythonModule khard) ]; + meta = { + description = "Address-completion for khard via deoplete"; + homepage = "https://github.com/nicoe/deoplete-khard"; + license = stdenv.lib.licenses.mit; + maintainers = with stdenv.lib.maintainers; [ jorsn ]; + }; + }); + ensime-vim = super.ensime-vim.overrideAttrs(old: { passthru.python3Dependencies = ps: with ps; [ sexpdata websocket_client ]; dependencies = with super; [ vimproc-vim vimshell-vim super.self forms ]; diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names index 17245014844..3b03976b05e 100644 --- a/pkgs/misc/vim-plugins/vim-plugin-names +++ b/pkgs/misc/vim-plugins/vim-plugin-names @@ -12,11 +12,12 @@ amiorin/ctrlp-z andreshazard/vim-logreview andsild/peskcolor.vim andviro/flake8-vim +andys8/vim-elm-syntax ap/vim-css-color arcticicestudio/nord-vim artur-shaik/vim-javacomplete2 -ayu-theme/ayu-vim autozimu/LanguageClient-neovim +ayu-theme/ayu-vim bazelbuild/vim-bazel bbchung/clighter8 benmills/vimux @@ -106,6 +107,7 @@ godlygeek/tabular google/vim-codefmt google/vim-jsonnet google/vim-maktaba +gorkunov/smartpairs.vim gotcha/vimelette gregsexton/gitv guns/vim-clojure-highlight @@ -157,6 +159,7 @@ joonty/vim-xdebug josa42/coc-go jpalardy/vim-slime jreybert/vimagit +jsfaint/gen_tags.vim JuliaEditorSupport/deoplete-julia JuliaEditorSupport/julia-vim Julian/vim-textobj-variable-segment @@ -170,6 +173,7 @@ junegunn/vim-easy-align junegunn/vim-github-dashboard junegunn/vim-peekaboo junegunn/vim-plug +junegunn/vim-slash justincampbell/vim-eighties justinmk/vim-dirvish justinmk/vim-sneak @@ -314,6 +318,7 @@ neovimhaskell/nvim-hs.vim neovim/nvimdev.nvim neutaaaaan/iosvkem nfnty/vim-nftables +nicoe/deoplete-khard nixprime/cpsm NLKNguyen/papercolor-theme noc7c9/vim-iced-coffee-script @@ -465,10 +470,12 @@ tyru/open-browser.vim uarun/vim-protobuf udalov/kotlin-vim ujihisa/neco-look +unblevable/quick-scope valloric/youcompleteme vhda/verilog_systemverilog.vim vim-airline/vim-airline vim-airline/vim-airline-themes +vimlab/split-term.vim vimoutliner/vimoutliner vim-pandoc/vim-pandoc vim-pandoc/vim-pandoc-after diff --git a/pkgs/os-specific/darwin/swift-corelibs/corefoundation.nix b/pkgs/os-specific/darwin/swift-corelibs/corefoundation.nix index 1df7070e7a3..4f2f84b3c0a 100644 --- a/pkgs/os-specific/darwin/swift-corelibs/corefoundation.nix +++ b/pkgs/os-specific/darwin/swift-corelibs/corefoundation.nix @@ -76,8 +76,8 @@ stdenv.mkDerivation { # later. buildPhase = stdenv.lib.optionalString true '' for i in {1..512}; do - if ninjaBuildPhase; then - break + if ninja -j $NIX_BUILD_CORES; then + break fi echo >&2 diff --git a/pkgs/os-specific/linux/alienfx/default.nix b/pkgs/os-specific/linux/alienfx/default.nix deleted file mode 100644 index d04e7b8fbeb..00000000000 --- a/pkgs/os-specific/linux/alienfx/default.nix +++ /dev/null @@ -1,39 +0,0 @@ -{ stdenv, libusb1, fetchgit}: - - -let - rev = "85ee5eeaca59a1c92659c3f49b148b0447d78f16"; -in - -stdenv.mkDerivation { - name = "alienfx-1.0.0"; - src = fetchgit { - inherit rev; - url = https://github.com/tibz/alienfx.git; - - sha256 = "47501a3b4e08d39edee4cd829ae24259a7e740b9798db76b846fa872989f8fb1"; - }; - - prePatch = '' - substituteInPlace Makefile --replace /usr/ $out/ - substituteInPlace Makefile --replace "install -o root -g root -m 4755" "install -m 555" - ''; - - patches = [./unistd.patch]; - buildInputs = [ libusb1 ]; - makeFlags = "build"; - preInstall = '' - mkdir -p $out/bin - mkdir -p $out/man/man1 - ''; - installTargets = "install"; - postInstall = ''cp alienfx.1 $out/man/man1''; - - meta = { - description = "Controls AlienFX lighting"; - homepage = https://github.com/tibz/alienfx; - maintainers = [stdenv.lib.maintainers.tomberek]; - platforms = stdenv.lib.platforms.linux; - }; -} - diff --git a/pkgs/os-specific/linux/alienfx/unistd.patch b/pkgs/os-specific/linux/alienfx/unistd.patch deleted file mode 100644 index 546a27892f0..00000000000 --- a/pkgs/os-specific/linux/alienfx/unistd.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/alienfx.cpp b/alienfx.cpp -index 5981039..aea8992 100644 ---- a/alienfx.cpp -+++ b/alienfx.cpp -@@ -13,6 +13,7 @@ - #include <string.h> - #include <iostream> - #include <libusb-1.0/libusb.h> -+#include <unistd.h> - - using namespace std; - diff --git a/pkgs/os-specific/linux/bcc/default.nix b/pkgs/os-specific/linux/bcc/default.nix index 449f8e3d40b..ffb14e9c3c1 100644 --- a/pkgs/os-specific/linux/bcc/default.nix +++ b/pkgs/os-specific/linux/bcc/default.nix @@ -1,38 +1,25 @@ { stdenv, fetchFromGitHub, makeWrapper, cmake, llvmPackages, kernel , flex, bison, elfutils, python, luajit, netperf, iperf, libelf -, systemtap +, systemtap, bash }: python.pkgs.buildPythonApplication rec { - version = "0.11.0"; + version = "0.12.0"; name = "bcc-${version}"; - srcs = [ - (fetchFromGitHub { - owner = "iovisor"; - repo = "bcc"; - rev = "v${version}"; - sha256 = "1v2gzdd4k58f3yxmq4z97a7xh5vyd84flzzfr9k2cm29i93cwcam"; - name = "bcc"; - }) - - # note: keep this in sync with the version that was used at the time of the - # tagged release! - (fetchFromGitHub { - owner = "libbpf"; - repo = "libbpf"; - rev = "a30df5c09fb3941fc42c4570ed2545e7057bf82a"; - sha256 = "088vb9sfs1zazlqi6abb3ia1xgpmwiz5pmz6y3a6gbh0zdrgh6px"; - name = "libbpf"; - }) - ]; - sourceRoot = "bcc"; + src = fetchFromGitHub { + owner = "iovisor"; + repo = "bcc"; + rev = "v${version}"; + sha256 = "1r2yjxam23k56prsvjhqf8i8d3irhcvmy0bly6x23h1jc3zc6yym"; + fetchSubmodules = true; + }; format = "other"; buildInputs = with llvmPackages; [ llvm clang-unwrapped kernel elfutils luajit netperf iperf - systemtap.stapBuild flex + systemtap.stapBuild flex bash ]; patches = [ @@ -58,12 +45,6 @@ python.pkgs.buildPythonApplication rec { patch -p1 < libbcc-path.patch ''; - preConfigure = '' - chmod -R u+w ../libbpf/ - rmdir src/cc/libbpf - (cd src/cc && ln -svf ../../../libbpf/ libbpf) - ''; - postInstall = '' mkdir -p $out/bin $out/share rm -r $out/share/bcc/tools/old @@ -76,6 +57,8 @@ python.pkgs.buildPythonApplication rec { if [ ! -e $bin ]; then ln -s $f $bin fi + substituteInPlace "$f" \ + --replace '$(dirname $0)/lib' "$out/share/bcc/tools/lib" done sed -i -e "s!lib=.*!lib=$out/bin!" $out/bin/{java,ruby,node,python}gc diff --git a/pkgs/os-specific/linux/bluez/bluez-5.37-obexd_without_systemd-1.patch b/pkgs/os-specific/linux/bluez/bluez-5.37-obexd_without_systemd-1.patch deleted file mode 100644 index 749787c5b3a..00000000000 --- a/pkgs/os-specific/linux/bluez/bluez-5.37-obexd_without_systemd-1.patch +++ /dev/null @@ -1,61 +0,0 @@ -Submitted By: Armin K. <krejzi at email dot com> -Date: 2013-04-29 -Initial Package Version: 5.17 -Upstream Status: unknown -Origin: Arch Linux (Giovanni Campagna) -Description: Allow using obexd without systemd in the user session - -Not all sessions run systemd --user (actually, the majority -doesn't), so the dbus daemon must be able to spawn obexd -directly, and to do so it needs the full path of the daemon. ---- - Makefile.obexd | 4 ++-- - obexd/src/org.bluez.obex.service | 4 ---- - obexd/src/org.bluez.obex.service.in | 4 ++++ - 3 files changed, 6 insertions(+), 6 deletions(-) - delete mode 100644 obexd/src/org.bluez.obex.service - create mode 100644 obexd/src/org.bluez.obex.service.in - -diff --git a/Makefile.obexd b/Makefile.obexd -index 3760867..142e7c3 100644 ---- a/Makefile.obexd -+++ b/Makefile.obexd -@@ -2,12 +2,12 @@ - if SYSTEMD - systemduserunitdir = @SYSTEMD_USERUNITDIR@ - systemduserunit_DATA = obexd/src/obex.service -+endif - - dbussessionbusdir = @DBUS_SESSIONBUSDIR@ - dbussessionbus_DATA = obexd/src/org.bluez.obex.service --endif - --EXTRA_DIST += obexd/src/obex.service.in obexd/src/org.bluez.obex.service -+EXTRA_DIST += obexd/src/obex.service.in obexd/src/org.bluez.obex.service.in - - obex_plugindir = $(libdir)/obex/plugins - -diff --git a/obexd/src/org.bluez.obex.service b/obexd/src/org.bluez.obex.service -deleted file mode 100644 -index a538088..0000000 ---- a/obexd/src/org.bluez.obex.service -+++ /dev/null -@@ -1,4 +0,0 @@ --[D-BUS Service] --Name=org.bluez.obex --Exec=/bin/false --SystemdService=dbus-org.bluez.obex.service -diff --git a/obexd/src/org.bluez.obex.service.in b/obexd/src/org.bluez.obex.service.in -new file mode 100644 -index 0000000..9c815f2 ---- /dev/null -+++ b/obexd/src/org.bluez.obex.service.in -@@ -0,0 +1,4 @@ -+[D-BUS Service] -+Name=org.bluez.obex -+Exec=@libexecdir@/obexd -+SystemdService=dbus-org.bluez.obex.service --- -1.8.3.1 - - diff --git a/pkgs/os-specific/linux/bluez/default.nix b/pkgs/os-specific/linux/bluez/default.nix index cca3674bdd1..cf9bcec554c 100644 --- a/pkgs/os-specific/linux/bluez/default.nix +++ b/pkgs/os-specific/linux/bluez/default.nix @@ -1,49 +1,58 @@ -{ stdenv, fetchurl, pkgconfig, dbus, glib, alsaLib, - python3, readline, udev, libical, systemd, fetchpatch, - enableWiimote ? false, enableMidi ? false, enableSixaxis ? false }: +{ stdenv +, lib +, fetchurl +, alsaLib +, dbus +, glib +, json_c +, libical +, pkgconfig +, python3 +, readline +, systemd +, udev +}: stdenv.mkDerivation rec { - name = "bluez-5.50"; + pname = "bluez"; + version = "5.52"; src = fetchurl { - url = "mirror://kernel/linux/bluetooth/${name}.tar.xz"; - sha256 = "048r91vx9gs5nwwbah2s0xig04nwk14c5s0vb7qmaqdvighsmz2z"; + url = "mirror://kernel/linux/bluetooth/${pname}-${version}.tar.xz"; + sha256 = "02jng21lp6fb3c2bh6vf9y7cj4gaxwk29dfc32ncy0lj0gi4q57p"; }; pythonPath = with python3.pkgs; [ - dbus-python pygobject2 pygobject3 recursivePthLoader + dbus-python + pygobject3 + recursivePthLoader ]; buildInputs = [ - dbus glib alsaLib python3 python3.pkgs.wrapPython - readline udev libical + alsaLib + dbus + glib + json_c + libical + python3 + readline + udev ]; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ + pkgconfig + python3.pkgs.wrapPython + ]; outputs = [ "out" "dev" "test" ]; - patches = [ - ./bluez-5.37-obexd_without_systemd-1.patch - (fetchpatch { - url = "https://git.kernel.org/pub/scm/bluetooth/bluez.git/patch/?id=1880b299086659844889cdaf687133aca5eaf102"; - name = "CVE-2018-10910-1.patch"; - sha256 = "17spsxza27gif8jpxk7360ynvwii1llfdfwg35rwywjjmvww0qj4"; - }) - (fetchpatch { - url = "https://git.kernel.org/pub/scm/bluetooth/bluez.git/patch/?id=9213ff7642a33aa481e3c61989ad60f7985b9984"; - name = "CVE-2018-10910-2.patch"; - sha256 = "0j7klbhym64yhn86dbsmybqmwx47bviyyhx931izl1p29z2mg8hn"; - }) - ]; - - postConfigure = '' + postPatch = '' substituteInPlace tools/hid2hci.rules \ --replace /sbin/udevadm ${systemd}/bin/udevadm \ --replace "hid2hci " "$out/lib/udev/hid2hci " ''; - configureFlags = (with stdenv.lib; [ + configureFlags = [ "--localstatedir=/var" "--enable-library" "--enable-cups" @@ -54,14 +63,21 @@ stdenv.mkDerivation rec { "--with-systemdsystemunitdir=${placeholder "out"}/etc/systemd/system" "--with-systemduserunitdir=${placeholder "out"}/etc/systemd/user" "--with-udevdir=${placeholder "out"}/lib/udev" - ] ++ optional enableWiimote [ "--enable-wiimote" ] - ++ optional enableMidi [ "--enable-midi" ] - ++ optional enableSixaxis [ "--enable-sixaxis" ]); + "--enable-health" + "--enable-mesh" + "--enable-midi" + "--enable-nfc" + "--enable-sap" + "--enable-sixaxis" + "--enable-wiimote" + ]; # Work around `make install' trying to create /var/lib/bluetooth. - installFlags = "statedir=$(TMPDIR)/var/lib/bluetooth"; + installFlags = [ "statedir=$(TMPDIR)/var/lib/bluetooth" ]; + + makeFlags = [ "rulesdir=${placeholder "out"}/lib/udev/rules.d" ]; - makeFlags = "rulesdir=${placeholder "out"}/lib/udev/rules.d"; + doCheck = stdenv.hostPlatform.isx86_64; postInstall = '' mkdir -p $test/{bin,test} diff --git a/pkgs/os-specific/linux/chromium-xorg-conf/default.nix b/pkgs/os-specific/linux/chromium-xorg-conf/default.nix index 58038923890..d9608650ed9 100644 --- a/pkgs/os-specific/linux/chromium-xorg-conf/default.nix +++ b/pkgs/os-specific/linux/chromium-xorg-conf/default.nix @@ -1,6 +1,6 @@ -{fetchgit }: +{ fetchFromGitiles }: -fetchgit { +fetchFromGitiles { name = "chromium-xorg-conf"; url = "https://chromium.googlesource.com/chromiumos/platform/xorg-conf"; rev = "26fb9d57e195c7e467616b35b17e2b5d279c1514"; diff --git a/pkgs/os-specific/linux/ebtables/default.nix b/pkgs/os-specific/linux/ebtables/default.nix index 23bd39ff388..3f025ca7504 100644 --- a/pkgs/os-specific/linux/ebtables/default.nix +++ b/pkgs/os-specific/linux/ebtables/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "ebtables"; - version = "2.0.10-4"; + version = "2.0.11"; src = fetchurl { - url = "mirror://sourceforge/ebtables/ebtables-v${version}.tar.gz"; - sha256 = "0pa5ljlk970yfyhpf3iqwfpbc30j8mgn90fapw9cfz909x47nvyw"; + url = "http://ftp.netfilter.org/pub/${pname}/${pname}-${version}.tar.gz"; + sha256 = "0apxgmkhsk3vxn9q3libxn3dgrdljrxyy4mli2gk49m7hi3na7xp"; }; makeFlags = @@ -15,11 +15,6 @@ stdenv.mkDerivation rec { "LOCALSTATEDIR=/var" ]; - preBuild = - '' - substituteInPlace Makefile --replace '-o root -g root' "" - ''; - NIX_CFLAGS_COMPILE = "-Wno-error"; preInstall = "mkdir -p $out/etc/sysconfig"; diff --git a/pkgs/os-specific/linux/fuse/default.nix b/pkgs/os-specific/linux/fuse/default.nix index edee6a52ba2..6792e05829d 100644 --- a/pkgs/os-specific/linux/fuse/default.nix +++ b/pkgs/os-specific/linux/fuse/default.nix @@ -11,7 +11,7 @@ in { }; fuse_3 = mkFuse { - version = "3.8.0"; - sha256Hash = "0zbj5l2pffs0q38lqfrnkafsgxf50mw5mqmh4m2jmqab1fxg5mip"; + version = "3.9.0"; + sha256Hash = "00yppzmv15jqjy3wq5ki9d49jl6bfxrlwr5sfz50ihr40d6dgx9p"; }; } diff --git a/pkgs/os-specific/linux/google-authenticator/default.nix b/pkgs/os-specific/linux/google-authenticator/default.nix index 03018c98818..a7aad276d37 100644 --- a/pkgs/os-specific/linux/google-authenticator/default.nix +++ b/pkgs/os-specific/linux/google-authenticator/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "google-authenticator-libpam"; - version = "1.06"; + version = "1.07"; src = fetchurl { url = "https://github.com/google/google-authenticator-libpam/archive/${version}.tar.gz"; - sha256 = "01kb1ppsc2fz1i3crdwi6ic8gyphjv89f5li6ypv3pp88v3kxw2j"; + sha256 = "01841dfmf6aw39idlv8y52b1nw9wx4skklzqhw1f519m0671ajhh"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/os-specific/linux/hostapd/default.nix b/pkgs/os-specific/linux/hostapd/default.nix index 41d7f236682..b1251a4396f 100644 --- a/pkgs/os-specific/linux/hostapd/default.nix +++ b/pkgs/os-specific/linux/hostapd/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "hostapd"; - version = "2.8"; + version = "2.9"; src = fetchurl { url = "https://w1.fi/releases/${pname}-${version}.tar.gz"; - sha256 = "1c74rrazkhy4lr7pwgwa2igzca7h9l4brrs7672kiv7fwqmm57wj"; + sha256 = "1mrbvg4v7vm7mknf0n29mf88k3s4a4qj6r4d51wq8hmjj1m7s7c8"; }; nativeBuildInputs = [ pkgconfig ]; @@ -49,6 +49,7 @@ stdenv.mkDerivation rec { CONFIG_INTERNETWORKING=y CONFIG_HS20=y CONFIG_ACS=y + CONFIG_GETRANDOM=y '' + stdenv.lib.optionalString (sqlite != null) '' CONFIG_SQLITE=y ''; diff --git a/pkgs/os-specific/linux/iptables/default.nix b/pkgs/os-specific/linux/iptables/default.nix index 882c24057bb..f556d7368e9 100644 --- a/pkgs/os-specific/linux/iptables/default.nix +++ b/pkgs/os-specific/linux/iptables/default.nix @@ -6,12 +6,12 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "1.8.3"; + version = "1.8.4"; pname = "iptables"; src = fetchurl { url = "https://www.netfilter.org/projects/${pname}/files/${pname}-${version}.tar.bz2"; - sha256 = "106xkkg5crsscjlinxvqvprva23fwwqfgrzl8m2nn841841sqg52"; + sha256 = "0z0mgs1ghvn3slc868mgbf2g26njgrzcy5ggyb5w4i55j1a3lflr"; }; nativeBuildInputs = [ pkgconfig pruneLibtoolFiles flex bison ]; diff --git a/pkgs/os-specific/linux/iw/default.nix b/pkgs/os-specific/linux/iw/default.nix index ad965f95c94..930f77437ac 100644 --- a/pkgs/os-specific/linux/iw/default.nix +++ b/pkgs/os-specific/linux/iw/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "iw"; - version = "5.3"; + version = "5.4"; src = fetchurl { url = "https://www.kernel.org/pub/software/network/${pname}/${pname}-${version}.tar.xz"; - sha256 = "1m85ap8hwzfs7xf9r0v5d55ra4mhw45f6vclc7j6gsldpibyibq4"; + sha256 = "0prrgb11pjrr6dw71v7nx2bic127qzrjifvz183v3mw8f1kryim2"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/kernel/common-config.nix b/pkgs/os-specific/linux/kernel/common-config.nix index ff3e4fb2562..4bd86a70267 100644 --- a/pkgs/os-specific/linux/kernel/common-config.nix +++ b/pkgs/os-specific/linux/kernel/common-config.nix @@ -363,6 +363,7 @@ let SECURITY_APPARMOR = yes; DEFAULT_SECURITY_APPARMOR = yes; + SECURITY_LOCKDOWN_LSM = whenAtLeast "5.4" yes; } // optionalAttrs (!stdenv.hostPlatform.isAarch32) { # Detect buffer overflows on the stack @@ -716,6 +717,9 @@ let # Enable AMD's ROCm GPU compute stack HSA_AMD = whenAtLeast "4.20" yes; + ZONE_DEVICE = whenAtLeast "5.3" yes; + HMM_MIRROR = whenAtLeast "5.3" yes; + DRM_AMDGPU_USERPTR = whenAtLeast "5.3" yes; PREEMPT = no; PREEMPT_VOLUNTARY = yes; diff --git a/pkgs/os-specific/linux/kernel/generate-config.pl b/pkgs/os-specific/linux/kernel/generate-config.pl index 26fc07202bb..26c559ea908 100644 --- a/pkgs/os-specific/linux/kernel/generate-config.pl +++ b/pkgs/os-specific/linux/kernel/generate-config.pl @@ -136,10 +136,12 @@ while (<CONFIG>) { } close CONFIG; +my $ret = 0; foreach my $name (sort (keys %answers)) { my $f = $requiredAnswers{$name} && $ignoreConfigErrors ne "1" - ? sub { die "error: " . $_[0]; } : sub { warn "warning: " . $_[0]; }; + ? sub { warn "error: " . $_[0]; $ret = -1; } : sub { warn "warning: " . $_[0]; }; &$f("unused option: $name\n") unless defined $config{$name}; &$f("option not set correctly: $name (wanted '$answers{$name}', got '$config{$name}')\n") if $config{$name} && $config{$name} ne $answers{$name}; } +exit $ret; diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix index 0f6d6393fe2..ccc2f94814a 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.14.157"; + version = "4.14.159"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0cvpagbjwpj63lpybfq1rnwdnxcjw49z0b5prah39krf0nd7dylh"; + sha256 = "1wi6m3w40z0v9krb12g9q09s9y471r51rhcv3qa81lc53cx2vm78"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.19.nix b/pkgs/os-specific/linux/kernel/linux-4.19.nix index c9a2771dfbc..a04156ebd84 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.19.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.19.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.19.87"; + version = "4.19.90"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "07fsds2k0hxqgny86winzl46d79g6mb9s28bp7nwlvwf67l22wm5"; + sha256 = "1zgpbim9019aymvgh0fr5g2r9j2xspw14amlnk09w5mgdl56rn19"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix index 477aa6d0cce..199a85f7f4b 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.4.205"; + version = "4.4.206"; extraMeta.branch = "4.4"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "19pasidvfmf94rs86v80x7hpirz9gavmkxwcl76ya61fq7lqy7zs"; + sha256 = "14ylg9cm7z12mvkzg8z92gsw0libw9xz392ayzw0d9cgw1py39ax"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix index 940c7c7e57c..885063c570a 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.9.205"; + version = "4.9.206"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "01cbqxw77g6rdg7dgk73pg9a2n9v4sxp48q2a77w1b068xjfifcq"; + sha256 = "1mnabj0d5ra40hijwynnzxnh5w1qnvkvj2l3ydsdhkdwm6cpiwhx"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-5.3.nix b/pkgs/os-specific/linux/kernel/linux-5.3.nix index 6349563bad1..d83f0fb9813 100644 --- a/pkgs/os-specific/linux/kernel/linux-5.3.nix +++ b/pkgs/os-specific/linux/kernel/linux-5.3.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "5.3.14"; + version = "5.3.18"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "0ckrbzwsc4lxd3l287wsd88mkfsd0kpf8nzchd9nfmkjiil14mwm"; + sha256 = "133342nv9ddjad2rizmcbilg9rhg339sfqr9l77j4cgkqhblkw90"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-5.4.nix b/pkgs/os-specific/linux/kernel/linux-5.4.nix index 1ac0d81530c..11cfcae8673 100644 --- a/pkgs/os-specific/linux/kernel/linux-5.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-5.4.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "5.4.1"; + version = "5.4.5"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "1nagqx18a49hgj13spvyf095231wgc441np4zcgl4gnm4jrqpm57"; + sha256 = "1h1ynb51gd4kiakqlkcc7vny45j2snbg4j985qf171mszckrz3jn"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-libre.nix b/pkgs/os-specific/linux/kernel/linux-libre.nix index d29a2382c2a..3231fc4ac62 100644 --- a/pkgs/os-specific/linux/kernel/linux-libre.nix +++ b/pkgs/os-specific/linux/kernel/linux-libre.nix @@ -1,11 +1,8 @@ { stdenv, lib, fetchsvn, linux , scripts ? fetchsvn { url = "https://www.fsfla.org/svn/fsfla/software/linux-libre/releases/branches/"; - - # Update this if linux_latest-libre fails to build. - # $ curl https://www.fsfla.org/svn/fsfla/software/linux-libre/releases/branches/ | grep -Eo 'Revision [0-9]+' - rev = "16794"; - sha256 = "1lpaka4hs7yrpnrzfybd6radjylwvw2p4aly68pypykqs2srvm7j"; + rev = "17119"; + sha256 = "0hyd7wp73w4555d42xcvk4x4nxrfckbzah2ckb4d2aqzxab87789"; } , ... }: @@ -36,6 +33,8 @@ in linux.override { ''; }; + passthru.updateScript = ./update-libre.sh; + maintainers = [ lib.maintainers.qyliss ]; }; } diff --git a/pkgs/os-specific/linux/kernel/linux-testing.nix b/pkgs/os-specific/linux/kernel/linux-testing.nix index 63a9c47a516..f89a7c93730 100644 --- a/pkgs/os-specific/linux/kernel/linux-testing.nix +++ b/pkgs/os-specific/linux/kernel/linux-testing.nix @@ -3,15 +3,15 @@ with stdenv.lib; buildLinux (args // rec { - version = "5.4-rc7"; - extraMeta.branch = "5.4"; + version = "5.5-rc2"; + extraMeta.branch = "5.5"; # modDirVersion needs to be x.y.z, will always add .0 modDirVersion = if (modDirVersionArg == null) then builtins.replaceStrings ["-"] [".0-"] version else modDirVersionArg; src = fetchurl { url = "https://git.kernel.org/torvalds/t/linux-${version}.tar.gz"; - sha256 = "1ii3klfb9yi0wbql2zss3pbhn4bb6ij6zk3mq5lip1yl8pwsj8wd"; + sha256 = "1fs432ld5k1j68hflqdxby9mxa6a7xnw1m6z5lfb9341gjw078xc"; }; # Should the testing kernels ever be built on Hydra? diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index fa5b168389b..4ec232d6255 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -6,6 +6,11 @@ patch = ./bridge-stp-helper.patch; }; + request_key_helper = + { name = "request-key-helper"; + patch = ./request-key-helper.patch; + }; + p9_fixes = { name = "p9-fixes"; patch = ./p9-fixes.patch; diff --git a/pkgs/os-specific/linux/kernel/request-key-helper.patch b/pkgs/os-specific/linux/kernel/request-key-helper.patch new file mode 100644 index 00000000000..8264e265aed --- /dev/null +++ b/pkgs/os-specific/linux/kernel/request-key-helper.patch @@ -0,0 +1,13 @@ +diff --git a/security/keys/request_key.c b/security/keys/request_key.c +index 957b9e3e1492..5436a0d8b81d 100644 +--- a/security/keys/request_key.c ++++ b/security/keys/request_key.c +@@ -114,7 +114,7 @@ static int call_usermodehelper_keys(const char *path, char **argv, char **envp, + */ + static int call_sbin_request_key(struct key *authkey, void *aux) + { +- static char const request_key[] = "/sbin/request-key"; ++ static char const request_key[] = "/run/current-system/sw/bin/request-key"; + struct request_key_auth *rka = get_request_key_auth(authkey); + const struct cred *cred = current_cred(); + key_serial_t prkey, sskey; diff --git a/pkgs/os-specific/linux/kernel/update-libre.sh b/pkgs/os-specific/linux/kernel/update-libre.sh new file mode 100755 index 00000000000..3b8a00edcda --- /dev/null +++ b/pkgs/os-specific/linux/kernel/update-libre.sh @@ -0,0 +1,26 @@ +#! /usr/bin/env nix-shell +#! nix-shell -i bash -p nix-prefetch-svn git curl +set -euo pipefail + +nixpkgs="$(git rev-parse --show-toplevel)" +path="$nixpkgs/pkgs/os-specific/linux/kernel/linux-libre.nix" + +old_rev="$(grep -o 'rev = ".*"' "$path" | awk -F'"' '{print $2}')" + +svn_url=https://www.fsfla.org/svn/fsfla/software/linux-libre/releases/branches/ +rev="$(curl -s "$svn_url" | grep -Em 1 -o 'Revision [0-9]+' | awk '{print $2}')" + +if [ "$old_rev" = "$rev" ]; then + echo "No updates for linux-libre" + exit 0 +fi + +sha256="$(QUIET=1 nix-prefetch-svn "$svn_url" "$rev" | tail -1)" + +sed -i -e "s/rev = \".*\"/rev = \"$rev\"/" \ + -e "s/sha256 = \".*\"/sha256 = \"$sha256\"/" "$path" + +if [ -n "$COMMIT" ]; then + git commit -qm "linux_latest-libre: $old_rev -> $rev" "$path" + echo "Updated linux_latest-libre $old_rev -> $rev" +fi diff --git a/pkgs/os-specific/linux/kernel/update.sh b/pkgs/os-specific/linux/kernel/update.sh index 7a86b05dafc..dbfa052d292 100755 --- a/pkgs/os-specific/linux/kernel/update.sh +++ b/pkgs/os-specific/linux/kernel/update.sh @@ -57,3 +57,6 @@ ls $NIXPKGS/pkgs/os-specific/linux/kernel | while read FILE; do echo "Updated $OLDVER -> $V" done + +# Update linux-libre +COMMIT=1 $NIXPKGS/pkgs/os-specific/linux/kernel/update-libre.sh diff --git a/pkgs/os-specific/linux/keyutils/conf-symlink.patch b/pkgs/os-specific/linux/keyutils/conf-symlink.patch new file mode 100644 index 00000000000..02762e857a8 --- /dev/null +++ b/pkgs/os-specific/linux/keyutils/conf-symlink.patch @@ -0,0 +1,13 @@ +diff --git a/request-key.c b/request-key.c +index bf47c0a..105fee8 100644 +--- a/request-key.c ++++ b/request-key.c +@@ -313,7 +313,7 @@ static void scan_conf_dir(struct parameters *params, const char *confdir) + while ((d = readdir(dir))) { + if (d->d_name[0] == '.') + continue; +- if (d->d_type != DT_UNKNOWN && d->d_type != DT_REG) ++ if (d->d_type != DT_UNKNOWN && d->d_type != DT_REG && d->d_type != DT_LNK) + continue; + l = strlen(d->d_name); + if (l < 5) diff --git a/pkgs/os-specific/linux/keyutils/default.nix b/pkgs/os-specific/linux/keyutils/default.nix index 792cd32d654..887aee45aa8 100644 --- a/pkgs/os-specific/linux/keyutils/default.nix +++ b/pkgs/os-specific/linux/keyutils/default.nix @@ -15,6 +15,7 @@ stdenv.mkDerivation rec { url = "https://salsa.debian.org/debian/keyutils/raw/4cecffcb8e2a2aa4ef41777ed40e4e4bcfb2e5bf/debian/patches/Make-build-reproducible.patch"; sha256 = "0wnvbjfrbk7rghd032z684l7vk7mhy3bd41zvhkrhgp3cd5id0bm"; }) + ./conf-symlink.patch ]; BUILDDATE = "1970-01-01"; diff --git a/pkgs/os-specific/linux/mbpfan/default.nix b/pkgs/os-specific/linux/mbpfan/default.nix index 1061653949f..4e2e31606c5 100644 --- a/pkgs/os-specific/linux/mbpfan/default.nix +++ b/pkgs/os-specific/linux/mbpfan/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "mbpfan"; - version = "2.2.0"; + version = "2.2.1"; src = fetchFromGitHub { owner = "dgraziotin"; repo = "mbpfan"; rev = "v${version}"; - sha256 = "0qcrxw4dx2fnq5hswzid2wi97zpn0k7kimprkl35nmsgz348xspr"; + sha256 = "0gc9ypxi55vxs77nx8ihhh9zk7fr9v0m0zfm76q7x0bi6jz11mbr"; }; installPhase = '' mkdir -p $out/bin $out/etc diff --git a/pkgs/os-specific/linux/nfs-utils/default.nix b/pkgs/os-specific/linux/nfs-utils/default.nix index 3f53c0f5817..74363be47f4 100644 --- a/pkgs/os-specific/linux/nfs-utils/default.nix +++ b/pkgs/os-specific/linux/nfs-utils/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, lib, pkgconfig, utillinux, libcap, libtirpc, libevent , sqlite, kerberos, kmod, libuuid, keyutils, lvm2, systemd, coreutils, tcp_wrappers -, python3, buildPackages +, python3, buildPackages, nixosTests }: let @@ -39,6 +39,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--enable-gss" + "--enable-svcgss" "--with-statedir=/var/lib/nfs" "--with-krb5=${lib.getLib kerberos}" "--with-systemd=${placeholder "out"}/etc/systemd/system" @@ -104,6 +105,12 @@ stdenv.mkDerivation rec { disallowedReferences = [ (lib.getDev kerberos) ]; + passthru.tests = { + nfs3-simple = nixosTests.nfs3.simple; + nfs4-simple = nixosTests.nfs4.simple; + nfs4-kerberos = nixosTests.nfs4.kerberos; + }; + meta = with stdenv.lib; { description = "Linux user-space NFS utilities"; diff --git a/pkgs/os-specific/linux/nftables/default.nix b/pkgs/os-specific/linux/nftables/default.nix index c9f9a512ad8..34f899977d1 100644 --- a/pkgs/os-specific/linux/nftables/default.nix +++ b/pkgs/os-specific/linux/nftables/default.nix @@ -10,12 +10,12 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "0.9.2"; + version = "0.9.3"; pname = "nftables"; src = fetchurl { url = "https://netfilter.org/projects/nftables/files/${pname}-${version}.tar.bz2"; - sha256 = "1x8kalbggjq44j4916i6vyv1rb20dlh1dcsf9xvzqsry2j063djw"; + sha256 = "0y6vbqp6x8w165q65h4n9sba1406gaz0d4744gqszbm7w9f92swm"; }; nativeBuildInputs = [ diff --git a/pkgs/os-specific/linux/nvidia-x11/settings.nix b/pkgs/os-specific/linux/nvidia-x11/settings.nix index 101f61f3020..533a74fcffd 100644 --- a/pkgs/os-specific/linux/nvidia-x11/settings.nix +++ b/pkgs/os-specific/linux/nvidia-x11/settings.nix @@ -50,6 +50,7 @@ stdenv.mkDerivation { buildInputs = [ jansson libXv libXrandr libXext libXxf86vm libvdpau nvidia_x11 gtk2 dbus ] ++ lib.optionals withGtk3 [ gtk3 librsvg wrapGAppsHook ]; + enableParallelBuilding = true; makeFlags = [ "NV_USE_BUNDLED_LIBJANSSON=0" ]; installFlags = [ "PREFIX=$(out)" ]; diff --git a/pkgs/os-specific/linux/procdump/default.nix b/pkgs/os-specific/linux/procdump/default.nix index 0185d3022bc..d24f665cc7c 100644 --- a/pkgs/os-specific/linux/procdump/default.nix +++ b/pkgs/os-specific/linux/procdump/default.nix @@ -1,28 +1,19 @@ -{ stdenv, fetchFromGitHub, fetchpatch, bash, coreutils, gdb, zlib }: +{ stdenv, fetchFromGitHub, bash, coreutils, gdb, zlib }: stdenv.mkDerivation rec { pname = "procdump"; - version = "1.0.1"; + version = "1.1"; src = fetchFromGitHub { owner = "Microsoft"; repo = "ProcDump-for-Linux"; rev = version; - sha256 = "1lkm05hq4hl1vadj9ifm18hi7cbf5045xlfxdfbrpsl6kxgfwcc4"; + sha256 = "1pcf6cpslpazla0na0q680dih9wb811q5irr7d2zmw0qmxm33jw2"; }; nativeBuildInputs = [ zlib ]; buildInputs = [ bash coreutils gdb ]; - patches = [ - # Fix name conflict when built with musl - # TODO: check if fixed upstream https://github.com/Microsoft/ProcDump-for-Linux/pull/50 - (fetchpatch { - url = "https://github.com/Microsoft/ProcDump-for-Linux/commit/1b7b50b910f20b463fb628c8213663c8a8d11d0d.patch"; - sha256 = "0h0dj3gi6hw1wdpc0ih9s4kkagv0d9jzrg602cr85r2z19lmb7yk"; - }) - ]; - postPatch = '' substituteInPlace src/CoreDumpWriter.c \ --replace '"gcore ' '"${gdb}/bin/gcore ' \ @@ -31,16 +22,26 @@ stdenv.mkDerivation rec { ''; makeFlags = [ - "DESTDIR=$(out)" + "DESTDIR=${placeholder "out"}" "INSTALLDIR=/bin" "MANDIR=/share/man/man1" ]; - doCheck = false; # needs root + doCheck = false; # needs sudo root + + doInstallCheck = true; + installCheckPhase = '' + runHook preInstallCheck + set +o pipefail + ($out/bin/procdump -h | grep "ProcDump v${version}") || + (echo "ERROR: ProcDump is not the expected version or does not run properly" ; exit 1) + set -o pipefail + runHook postInstallCheck + ''; meta = with stdenv.lib; { description = "A Linux version of the ProcDump Sysinternals tool"; - homepage = https://github.com/Microsoft/ProcDump-for-Linux; + homepage = "https://github.com/Microsoft/ProcDump-for-Linux"; license = licenses.mit; maintainers = with maintainers; [ c0bw3b ]; platforms = platforms.linux; diff --git a/pkgs/os-specific/linux/rdma-core/default.nix b/pkgs/os-specific/linux/rdma-core/default.nix index da40321d6bc..2162db25c86 100644 --- a/pkgs/os-specific/linux/rdma-core/default.nix +++ b/pkgs/os-specific/linux/rdma-core/default.nix @@ -4,7 +4,7 @@ } : let - version = "26.0"; + version = "26.1"; in stdenv.mkDerivation { pname = "rdma-core"; @@ -14,7 +14,7 @@ in stdenv.mkDerivation { owner = "linux-rdma"; repo = "rdma-core"; rev = "v${version}"; - sha256 = "0yvhc7xc3mxzjd7v2y408w333qi7hkf1f99gbsd3fv2qydp9gps3"; + sha256 = "1zb1y70ff8yy7rdl4gh2jx1gpja5hrbsh8gfi9fsxkz2rv1234r0"; }; nativeBuildInputs = [ cmake pkgconfig pandoc docutils makeWrapper ]; diff --git a/pkgs/os-specific/linux/reptyr/default.nix b/pkgs/os-specific/linux/reptyr/default.nix index c078fb18c4e..1635dc064be 100644 --- a/pkgs/os-specific/linux/reptyr/default.nix +++ b/pkgs/os-specific/linux/reptyr/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, python2 }: +{ stdenv, lib, fetchFromGitHub, fetchpatch, python2 }: stdenv.mkDerivation rec { version = "0.7.0"; @@ -11,6 +11,14 @@ stdenv.mkDerivation rec { sha256 = "1hnijfz1ab34j2h2cxc3f43rmbclyihgn9x9wxa7jqqgb2xm71hj"; }; + patches = [ + # Fix tests hanging + (fetchpatch { + url = "https://github.com/nelhage/reptyr/commit/bca3070ac0f3888b5d37ee162505be81b3b496ff.patch"; + sha256 = "0w6rpv9k4a80q0ijzdq5hlpr37ncr284piqjv5agy8diniwlilab"; + }) + ]; + makeFlags = [ "PREFIX=" "DESTDIR=$(out)" ]; checkInputs = [ (python2.withPackages (p: [ p.pexpect ])) ]; diff --git a/pkgs/os-specific/linux/shadow/default.nix b/pkgs/os-specific/linux/shadow/default.nix index f810270a29e..c2547ce262a 100644 --- a/pkgs/os-specific/linux/shadow/default.nix +++ b/pkgs/os-specific/linux/shadow/default.nix @@ -19,13 +19,13 @@ in stdenv.mkDerivation rec { pname = "shadow"; - version = "4.7"; + version = "4.8"; src = fetchFromGitHub { owner = "shadow-maint"; repo = "shadow"; rev = version; - sha256 = "0a7g9k83igfid8pybqpk6fracmz2q021isn2by3994p4hhh3s327"; + sha256 = "05a636dqxip09l5jjrrs30lvwq6xkhjrdgjbbj3bg6b6z7hc67qk"; }; buildInputs = stdenv.lib.optional (pam != null && stdenv.isLinux) pam; @@ -38,12 +38,6 @@ stdenv.mkDerivation rec { # Obtain XML resources from XML catalog (patch adapted from gtk-doc) ./respect-xml-catalog-files-var.patch dots_in_usernames - # Allow building with itstool - # https://github.com/shadow-maint/shadow/pull/184 - (fetchpatch { - url = https://github.com/shadow-maint/shadow/commit/6c6c8d3a33bba32277e1ed46f55df1e6dbc914b7.patch; - sha256 = "0xfr1mrfv5xsmri6l7ycbpz3qhs4vf3fyci4kwpffi3icsfjn557"; - }) ]; # The nix daemon often forbids even creating set[ug]id files. diff --git a/pkgs/servers/amqp/rabbitmq-server/default.nix b/pkgs/servers/amqp/rabbitmq-server/default.nix index bc83c5a8ea2..a25bf48f8dd 100644 --- a/pkgs/servers/amqp/rabbitmq-server/default.nix +++ b/pkgs/servers/amqp/rabbitmq-server/default.nix @@ -6,12 +6,12 @@ stdenv.mkDerivation rec { pname = "rabbitmq-server"; - version = "3.8.1"; + version = "3.8.2"; # when updating, consider bumping elixir version in all-packages.nix src = fetchurl { url = "https://github.com/rabbitmq/rabbitmq-server/releases/download/v${version}/${pname}-${version}.tar.xz"; - sha256 = "17ymzjgz3544jgf321f8f788gdxs9l252ah61nlgsglv0x8gggrh"; + sha256 = "17gixahxass9n4d697my8sq4an51rw3cicb36fqvl8fbhnwjjrwc"; }; buildInputs = diff --git a/pkgs/servers/atlassian/confluence.nix b/pkgs/servers/atlassian/confluence.nix index 4d403e7d938..a5aead770b8 100644 --- a/pkgs/servers/atlassian/confluence.nix +++ b/pkgs/servers/atlassian/confluence.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "atlassian-confluence"; - version = "7.0.3"; + version = "7.2.0"; src = fetchurl { url = "https://product-downloads.atlassian.com/software/confluence/downloads/${pname}-${version}.tar.gz"; - sha256 = "1anmhfdy4q74wchzha8fd2bd5hx0a2v3bgp9p5yvb8cal31zqcpd"; + sha256 = "1srwxk9c26hp1j3v6v1hr16l4dqaaiwrli5a9n9a44hkl7qy8yzl"; }; buildPhase = '' @@ -37,8 +37,8 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Team collaboration software written in Java and mainly used in corporate environments"; - homepage = https://www.atlassian.com/software/confluence; + homepage = "https://www.atlassian.com/software/confluence"; license = licenses.unfree; - maintainers = with maintainers; [ fpletz globin ]; + maintainers = with maintainers; [ fpletz globin willibutz ]; }; } diff --git a/pkgs/servers/dns/coredns/default.nix b/pkgs/servers/dns/coredns/default.nix index def78223f12..2c8506ac9d2 100644 --- a/pkgs/servers/dns/coredns/default.nix +++ b/pkgs/servers/dns/coredns/default.nix @@ -1,8 +1,8 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoModule, fetchFromGitHub }: -buildGoPackage rec { +buildGoModule rec { pname = "coredns"; - version = "1.3.1"; + version = "1.6.6"; goPackagePath = "github.com/coredns/coredns"; @@ -10,15 +10,15 @@ buildGoPackage rec { owner = "coredns"; repo = "coredns"; rev = "v${version}"; - sha256 = "0aflm0c3qcjcq4dy7yx9f5xlvdm4k0b2awsp3qvbfgyp74by0584"; + sha256 = "1x8sgchp0kkk5xdharjrq29qxgv1mdzrw3f12s2kchgqf1m6r0sx"; }; - goDeps = ./deps.nix; + modSha256 = "10ljggg1g5x00gpgzc5m29n1k5akf0s0g3hkdh8adcbrcz0pgr5c"; meta = with stdenv.lib; { - homepage = https://coredns.io; + homepage = "https://coredns.io"; description = "A DNS server that runs middleware"; license = licenses.asl20; - maintainers = [ maintainers.rushmorem maintainers.rtreffer maintainers.deltaevo ]; + maintainers = with maintainers; [ rushmorem rtreffer deltaevo ]; }; } diff --git a/pkgs/servers/dns/coredns/deps.nix b/pkgs/servers/dns/coredns/deps.nix deleted file mode 100644 index 4dd8228c8a6..00000000000 --- a/pkgs/servers/dns/coredns/deps.nix +++ /dev/null @@ -1,84 +0,0 @@ -[ - { - goPackagePath = "github.com/mholt/caddy"; - fetch = { - type = "git"; - url = "https://github.com/mholt/caddy"; - rev = "v0.11.1"; - sha256 = "0v35d3dy0f88wgk1vzznbx7p15vjjf7xm3qfi2c3192rsxgzvy0l"; - }; - } - { - goPackagePath = "github.com/miekg/dns"; - fetch = { - type = "git"; - url = "https://github.com/miekg/dns"; - rev = "v1.1.3"; - sha256 = "1xs1k9jm9f04y8callww9x4s0jrxmsn7882iyy4br8sbpl3wzkw4"; - }; - } - { - goPackagePath = "github.com/prometheus/client_golang"; - fetch = { - type = "git"; - url = "https://github.com/prometheus/client_golang"; - rev = "v0.9.1"; - sha256 = "01gnylazia30pcp069xcng482gwmm3xcx5zgrlwdkhic1lyb6i9l"; - }; - } - # client_golang dependencies - { - goPackagePath = "github.com/beorn7/perks"; - fetch = { - type = "git"; - url = "https://github.com/beorn7/perks"; - rev = "3a771d992973f24aa725d07868b467d1ddfceafb"; - sha256 = "1l2lns4f5jabp61201sh88zf3b0q793w4zdgp9nll7mmfcxxjif3"; - }; - } - { - goPackagePath = "github.com/golang/protobuf"; - fetch = { - type = "git"; - url = "https://github.com/golang/protobuf"; - rev = "347cf4a86c1cb8d262994d8ef5924d4576c5b331"; - sha256 = "0c5j5c2dnj1452653c8nnpx4jwijwafi1p8685g7ddm6kng9q1wz"; - }; - } - { - goPackagePath = "github.com/matttproud/golang_protobuf_extensions"; - fetch = { - type = "git"; - url = "https://github.com/matttproud/golang_protobuf_extensions"; - rev = "c182affec369e30f25d3eb8cd8a478dee585ae7d"; - sha256 = "1xqsf9vpcrd4hp95rl6kgmjvkv1df4aicfw4l5vfcxcwxknfx2xs"; - }; - } - { - goPackagePath = "github.com/prometheus/client_model"; - fetch = { - type = "git"; - url = "https://github.com/prometheus/client_model"; - rev = "56726106282f1985ea77d5305743db7231b0c0a8"; - sha256 = "19y4qs9mkxiiab5sh3b7cccjpl3xbp6sy8812ig9f1zg8vzkzj7j"; - }; - } - { - goPackagePath = "github.com/prometheus/common"; - fetch = { - type = "git"; - url = "https://github.com/prometheus/common"; - rev = "2998b132700a7d019ff618c06a234b47c1f3f681"; - sha256 = "131qmx0rs1nz0ci3qzkks4i6fdmr5c69i48h5cngjizlb9xxwir2"; - }; - } - { - goPackagePath = "github.com/prometheus/procfs"; - fetch = { - type = "git"; - url = "https://github.com/prometheus/procfs"; - rev = "bf6a532e95b1f7a62adf0ab5050a5bb2237ad2f4"; - sha256 = "0k65i2ikf3jp6863mpc1raf928i78r8jd7zn9djx6f4izls6l6j1"; - }; - } -] diff --git a/pkgs/servers/dns/knot-dns/default.nix b/pkgs/servers/dns/knot-dns/default.nix index 26d0217254a..c3d63a54ac0 100644 --- a/pkgs/servers/dns/knot-dns/default.nix +++ b/pkgs/servers/dns/knot-dns/default.nix @@ -7,11 +7,11 @@ let inherit (stdenv.lib) optional optionals; in # Note: ATM only the libraries have been tested in nixpkgs. stdenv.mkDerivation rec { pname = "knot-dns"; - version = "2.9.1"; + version = "2.9.2"; src = fetchurl { url = "https://secure.nic.cz/files/knot-dns/knot-${version}.tar.xz"; - sha256 = "f19121956caa360c387923654f13e4c97b3fb9093d242e110d7e0916b8d8a04d"; + sha256 = "298cdf33aa7589b50df7e5833694b24cd2de8b6d17cee7e1673873fe576db6ee"; }; outputs = [ "bin" "out" "dev" ]; diff --git a/pkgs/servers/documize-community/default.nix b/pkgs/servers/documize-community/default.nix index 2cc6b2a9f74..078936b237f 100644 --- a/pkgs/servers/documize-community/default.nix +++ b/pkgs/servers/documize-community/default.nix @@ -1,37 +1,26 @@ -{ lib, buildGoPackage, fetchFromGitHub, go-bindata, go-bindata-assetfs }: +{ lib, buildGoModule, fetchFromGitHub, go-bindata, go-bindata-assetfs }: -buildGoPackage rec { +buildGoModule rec { pname = "documize-community"; - version = "3.5.0"; + version = "3.6.0"; src = fetchFromGitHub { owner = "documize"; repo = "community"; rev = "v${version}"; - sha256 = "1y38lgkxhyrga44wj216vl08fzyv8wbk02a85flnihrb4b1092x0"; + sha256 = "0wic4j7spw9ya1m6yz0mkpqi1px6jd2vk60w8ldx0m0k606wy6ir"; }; - goPackagePath = "github.com/documize/community"; + modSha256 = "1z0v7n8klaxcqv7mvzf3jzgrp78zb4yiibx899ppk6i5qnj4xiv0"; buildInputs = [ go-bindata-assetfs go-bindata ]; - buildPhase = '' - runHook preBuild + subPackages = [ "edition/community.go" ]; - pushd go/src/github.com/documize/community - GO111MODULE=off go build -gcflags="all=-trimpath=$GOPATH" -o bin/documize ./edition/community.go - popd - - runHook postBuild - ''; - - installPhase = '' - runHook preInstall - - mkdir -p $bin/bin - cp go/src/github.com/documize/community/bin/documize $bin/bin - - runHook postInstall + postInstall = '' + # `buildGoModule` calls `go install` (without `go build` first), so + # `-o bin/documize` doesn't work. + mv $out/bin/community $out/bin/documize ''; meta = with lib; { diff --git a/pkgs/servers/gotty/default.nix b/pkgs/servers/gotty/default.nix index da24b0a0e26..a9cf6c1da47 100644 --- a/pkgs/servers/gotty/default.nix +++ b/pkgs/servers/gotty/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "gotty"; - version = "0.0.13"; + version = "2.0.0-alpha.3"; rev = "v${version}"; goPackagePath = "github.com/yudai/gotty"; @@ -11,11 +11,9 @@ buildGoPackage rec { inherit rev; owner = "yudai"; repo = "gotty"; - sha256 = "1hsfjyjjzr1zc9m8bnhid1ag6ipcbx59111y9p7k8az8jiyr112g"; + sha256 = "1vhhs7d4k1vpkf2k69ai2r3bp3zwnwa8l9q7vza0rck69g4nmz7a"; }; - goDeps = ./deps.nix; - meta = with stdenv.lib; { description = "Share your terminal as a web application"; homepage = https://github.com/yudai/gotty; diff --git a/pkgs/servers/gotty/deps.nix b/pkgs/servers/gotty/deps.nix deleted file mode 100644 index 4f59dc414c4..00000000000 --- a/pkgs/servers/gotty/deps.nix +++ /dev/null @@ -1,74 +0,0 @@ -[ - { - goPackagePath = "github.com/gorilla/websocket"; - fetch = { - type = "git"; - url = "https://github.com/gorilla/websocket"; - rev = "a622679ebd7a3b813862379232f645f8e690e43f"; - sha256 = "1nc9jbcmgya1i6dmf6sbcqsnxi9hbjg6dz1z0k7zmc6xdwlq0y4q"; - }; - } - { - goPackagePath = "github.com/kr/pty"; - fetch = { - type = "git"; - url = "https://github.com/kr/pty"; - rev = "67e2db24c831afa6c64fc17b4a143390674365ef"; - sha256 = "1l3z3wbb112ar9br44m8g838z0pq2gfxcp5s3ka0xvm1hjvanw2d"; - }; - } - { - goPackagePath = "github.com/braintree/manners"; - fetch = { - type = "git"; - url = "https://github.com/braintree/manners"; - rev = "cab36f97339b1925cd89e158632728025557e550"; - sha256 = "1q508c62iiklghkhwqz9c0zsn9hrij7kqb93gdywzj7ms7x6hlfh"; - }; - } - { - goPackagePath = "github.com/codegangsta/cli"; - fetch = { - type = "git"; - url = "https://github.com/codegangsta/cli"; - rev = "71f57d300dd6a780ac1856c005c4b518cfd498ec"; - sha256 = "1fxznirkvank5461789dm5aw5z8aqi0jvwligvz44659rfl376p3"; - }; - } - { - goPackagePath = "github.com/elazarl/go-bindata-assetfs"; - fetch = { - type = "git"; - url = "https://github.com/elazarl/go-bindata-assetfs"; - rev = "d5cac425555ca5cf00694df246e04f05e6a55150"; - sha256 = "636ce247ff6f85c14f38a421f46662fa77bdc29762692e1f72b3cd1f9d7a1d17"; - }; - } - { - goPackagePath = "github.com/fatih/structs"; - fetch = { - type = "git"; - url = "https://github.com/fatih/structs"; - rev = "a9f7daa9c2729e97450c2da2feda19130a367d8f"; - sha256 = "0pyrc7svc826g37al3db19n5l4r2m9h1mlhjh3hz2r41xfaqia50"; - }; - } - { - goPackagePath = "github.com/hashicorp/hcl"; - fetch = { - type = "git"; - url = "https://github.com/hashicorp/hcl"; - rev = "54864211433d45cb780682431585b3e573b49e4a"; - sha256 = "07l2dydzjpdgm2d4a72hkmincn455j3nrafg6hs3c23bkvizj950"; - }; - } - { - goPackagePath = "github.com/hashicorp/go-multierror"; - fetch = { - type = "git"; - url = "https://github.com/hashicorp/go-multierror"; - rev = "56912fb08d85084aa318edcf2bba735b97cf35c5"; - sha256 = "0s01cqdab2f7fxkkjjk2wqx05a1shnwlvfn45h2pi3i4gapvcn0r"; - }; - } -] diff --git a/pkgs/servers/hitch/default.nix b/pkgs/servers/hitch/default.nix index 7bc2da8b023..442796b8065 100644 --- a/pkgs/servers/hitch/default.nix +++ b/pkgs/servers/hitch/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, docutils, libev, openssl, pkgconfig }: stdenv.mkDerivation rec { - version = "1.5.0"; + version = "1.5.2"; pname = "hitch"; src = fetchurl { url = "https://hitch-tls.org/source/${pname}-${version}.tar.gz"; - sha256 = "02sd2p3jsbnqmldsjwzk5qcjc45k9n1x4ygjkx0kxxwjj9lm9hhf"; + sha256 = "1nnzqqigfw78nqhp81a72x1s8d6v49ayw4w5df0zzm2cb1jgv95i"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix index f46868c4cb4..492d5a0b0dc 100644 --- a/pkgs/servers/home-assistant/component-packages.nix +++ b/pkgs/servers/home-assistant/component-packages.nix @@ -644,7 +644,7 @@ "sensehat" = ps: with ps; [ ]; "sensibo" = ps: with ps; [ ]; "sensor" = ps: with ps; [ ]; - "serial" = ps: with ps; [ ]; + "serial" = ps: with ps; [ pyserial-asyncio ]; "serial_pm" = ps: with ps; [ ]; "sesame" = ps: with ps; [ ]; "seven_segments" = ps: with ps; [ ]; @@ -814,7 +814,7 @@ "vicare" = ps: with ps; [ ]; "vivotek" = ps: with ps; [ ]; "vizio" = ps: with ps; [ ]; - "vlc" = ps: with ps; [ ]; + "vlc" = ps: with ps; [ python-vlc ]; "vlc_telnet" = ps: with ps; [ ]; "voicerss" = ps: with ps; [ ]; "volkszaehler" = ps: with ps; [ ]; @@ -873,7 +873,7 @@ "zengge" = ps: with ps; [ ]; "zeroconf" = ps: with ps; [ aiohttp-cors zeroconf ]; "zestimate" = ps: with ps; [ xmltodict ]; - "zha" = ps: with ps; [ ]; + "zha" = ps: with ps; [ zha-quirks zigpy-deconz zigpy ]; "zhong_hong" = ps: with ps; [ ]; "zigbee" = ps: with ps; [ ]; "ziggo_mediabox_xl" = ps: with ps; [ ]; diff --git a/pkgs/servers/http/4store/4store-1.1.6-glibc-2.26.patch b/pkgs/servers/http/4store/4store-1.1.6-glibc-2.26.patch deleted file mode 100644 index dda21c54f69..00000000000 --- a/pkgs/servers/http/4store/4store-1.1.6-glibc-2.26.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/src/frontend/filter-datatypes.c b/src/frontend/filter-datatypes.c -index 8aae1dd..49ed358 100644 ---- a/src/frontend/filter-datatypes.c -+++ b/src/frontend/filter-datatypes.c -@@ -23,6 +23,7 @@ - #include <string.h> - #include <math.h> - #define __USE_MISC -+#define __USE_XOPEN_EXTENDED - #include <time.h> - - #include "filter.h" diff --git a/pkgs/servers/http/4store/default.nix b/pkgs/servers/http/4store/default.nix deleted file mode 100644 index 6e4be4a36fe..00000000000 --- a/pkgs/servers/http/4store/default.nix +++ /dev/null @@ -1,50 +0,0 @@ -{ stdenv, fetchFromGitHub, librdf_raptor -, librdf_rasqal, glib, libxml2, pcre -, avahi, readline, ncurses, expat, autoreconfHook -, zlib, pkgconfig, which, perl, libuuid -, gmp, mpfr -, db_dir ? "/var/lib/4store" }: - - -stdenv.mkDerivation rec { - pname = "4store"; - version = "1.1.6"; - - src = fetchFromGitHub { - owner = "4store"; - repo = "4store"; - rev = "v${version}"; - sha256 = "1kzdfmwpzy64cgqlkcz5v4klwx99w0jk7afckyf7yqbqb4rydmpk"; - }; - - patches = [ ./4store-1.1.6-glibc-2.26.patch ]; - - nativeBuildInputs = [ autoreconfHook perl pkgconfig which ]; - - buildInputs = [ librdf_raptor librdf_rasqal glib libxml2 pcre - avahi readline ncurses expat zlib libuuid gmp mpfr ]; - - # needed for ./autogen.sh - prePatch = '' - echo "${version}" > .version - ''; - - preConfigure = '' - sed -e 's@#! */bin/bash@#! ${stdenv.shell}@' -i configure - find . -name Makefile -exec sed -e "s@/usr/local@$out@g" -i '{}' ';' - - rm src/utilities/4s-backend - sed -e 's@/var/lib/4store@${db_dir}@g' -i configure.ac src/utilities/* - sed -e '/FS_STORE_ROOT/d' -i src/utilities/Makefile* - ''; - - enableParallelBuilding = true; - - meta = with stdenv.lib; { - description = "SparQL query server (RDF storage)"; - homepage = https://4store.danielknoell.de/; - maintainers = with maintainers; [ raskin ]; - platforms = platforms.linux; - broken = true; # since 2018-04-11 - }; -} diff --git a/pkgs/servers/http/4store/src-for-default.nix b/pkgs/servers/http/4store/src-for-default.nix deleted file mode 100644 index 7076b921911..00000000000 --- a/pkgs/servers/http/4store/src-for-default.nix +++ /dev/null @@ -1,9 +0,0 @@ -rec { - version="v1.1.5"; - name="4store-v1.1.5"; - hash="0nwckvf8xqwvc2h3v6s1rvmxvcx2xrjy6yapghc052180jw6zp9b"; - url="http://4store.org/download/4store-${version}.tar.gz"; - advertisedUrl="http://4store.org/download/4store-v1.1.5.tar.gz"; - - -} diff --git a/pkgs/servers/http/4store/src-info-for-default.nix b/pkgs/servers/http/4store/src-info-for-default.nix deleted file mode 100644 index 91a9bad92de..00000000000 --- a/pkgs/servers/http/4store/src-info-for-default.nix +++ /dev/null @@ -1,6 +0,0 @@ -{ - downloadPage = "http://4store.org/download/"; - baseName = "4store"; - choiceCommand = "tail -n 1"; - versionExtractorSedScript = "s@.*-(v[0-9.]+)[.].*@\\1@"; -} diff --git a/pkgs/servers/http/unit/default.nix b/pkgs/servers/http/unit/default.nix index f05d9c1ce8f..8711be4b5c0 100644 --- a/pkgs/servers/http/unit/default.nix +++ b/pkgs/servers/http/unit/default.nix @@ -1,11 +1,14 @@ { stdenv, fetchFromGitHub, which -, withPython ? true, python -, withPHP72 ? true, php72 -, withPHP73 ? false, php73 -, withPerl ? true, perl +, withPython2 ? false, python2 +, withPython3 ? true, python3, ncurses +, withPHP72 ? false, php72 +, withPHP73 ? true, php73 +, withPerl528 ? false, perl528 +, withPerl530 ? true, perl530 , withPerldevel ? false, perldevel , withRuby_2_4 ? false, ruby_2_4 -, withRuby ? true, ruby +, withRuby_2_5 ? false, ruby_2_5 +, withRuby_2_6 ? true, ruby_2_6 , withSSL ? true, openssl ? null , withIPv6 ? true , withDebug ? false @@ -14,26 +17,29 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "1.12.0"; + version = "1.13.0"; pname = "unit"; src = fetchFromGitHub { owner = "nginx"; repo = "unit"; rev = version; - sha256 = "1ylzfsajjfaxzn7mycjs69ms4x58r4szpk07kqrmbf03dp2cmxkq"; + sha256 = "1b5il05isq5yvnx2qpnihsrmj0jliacvhrm58i87d48anwpv1k8q"; }; nativeBuildInputs = [ which ]; buildInputs = [ ] - ++ optional withPython python + ++ optional withPython2 python2 + ++ optionals withPython3 [ python3 ncurses ] ++ optional withPHP72 php72 ++ optional withPHP73 php73 - ++ optional withPerl perl + ++ optional withPerl528 perl528 + ++ optional withPerl530 perl530 ++ optional withPerldevel perldevel ++ optional withRuby_2_4 ruby_2_4 - ++ optional withRuby ruby + ++ optional withRuby_2_5 ruby_2_5 + ++ optional withRuby_2_6 ruby_2_6 ++ optional withSSL openssl; configureFlags = [ @@ -46,13 +52,16 @@ stdenv.mkDerivation rec { ++ optional withDebug [ "--debug" ]; postConfigure = '' - ${optionalString withPython "./configure python --module=python --config=${python}/bin/python-config --lib-path=${python}/lib"} - ${optionalString withPHP72 "./configure php --module=php72 --config=${php72.dev}/bin/php-config --lib-path=${php72}/lib"} - ${optionalString withPHP73 "./configure php --module=php73 --config=${php73.dev}/bin/php-config --lib-path=${php73}/lib"} - ${optionalString withPerl "./configure perl --module=perl --perl=${perl}/bin/perl"} - ${optionalString withPerldevel "./configure perl --module=perl529 --perl=${perldevel}/bin/perl"} - ${optionalString withRuby_2_4 "./configure ruby --module=ruby24 --ruby=${ruby_2_4}/bin/ruby"} - ${optionalString withRuby "./configure ruby --module=ruby --ruby=${ruby}/bin/ruby"} + ${optionalString withPython2 "./configure python --module=python2 --config=${python2}/bin/python2-config --lib-path=${python2}/lib"} + ${optionalString withPython3 "./configure python --module=python3 --config=${python3}/bin/python3-config --lib-path=${python3}/lib"} + ${optionalString withPHP72 "./configure php --module=php72 --config=${php72.dev}/bin/php-config --lib-path=${php72}/lib"} + ${optionalString withPHP73 "./configure php --module=php73 --config=${php73.dev}/bin/php-config --lib-path=${php73}/lib"} + ${optionalString withPerl528 "./configure perl --module=perl528 --perl=${perl528}/bin/perl"} + ${optionalString withPerl530 "./configure perl --module=perl530 --perl=${perl530}/bin/perl"} + ${optionalString withPerldevel "./configure perl --module=perldev --perl=${perldevel}/bin/perl"} + ${optionalString withRuby_2_4 "./configure ruby --module=ruby24 --ruby=${ruby_2_4}/bin/ruby"} + ${optionalString withRuby_2_5 "./configure ruby --module=ruby25 --ruby=${ruby_2_5}/bin/ruby"} + ${optionalString withRuby_2_6 "./configure ruby --module=ruby26 --ruby=${ruby_2_6}/bin/ruby"} ''; meta = { diff --git a/pkgs/servers/jellyfin/default.nix b/pkgs/servers/jellyfin/default.nix index 3ceeb73e4ef..b1116dc4a95 100644 --- a/pkgs/servers/jellyfin/default.nix +++ b/pkgs/servers/jellyfin/default.nix @@ -18,12 +18,12 @@ let in stdenv.mkDerivation rec { pname = "jellyfin"; - version = "10.4.2"; + version = "10.4.3"; # Impossible to build anything offline with dotnet src = fetchurl { url = "https://github.com/jellyfin/jellyfin/releases/download/v${version}/jellyfin_${version}_portable.tar.gz"; - sha256 = "08y3bxyqwpa28hgvvpiksbvss9wahmxprbi2dsm4gks9ba412f2f"; + sha256 = "11scxcwf02h6gvll0jwwac1wcpwz8d2y16yc3da0hrhy34yhysbl"; }; buildInputs = [ diff --git a/pkgs/servers/mail/dovecot/2.2.x-module_dir.patch b/pkgs/servers/mail/dovecot/2.2.x-module_dir.patch deleted file mode 100644 index 422bfad92e6..00000000000 --- a/pkgs/servers/mail/dovecot/2.2.x-module_dir.patch +++ /dev/null @@ -1,135 +0,0 @@ -diff --git a/src/auth/main.c b/src/auth/main.c -index 2dbf9e1..b1e778a 100644 ---- a/src/auth/main.c -+++ b/src/auth/main.c -@@ -192,7 +192,7 @@ static void main_preinit(void) - mod_set.debug = global_auth_settings->debug; - mod_set.filter_callback = auth_module_filter; - -- modules = module_dir_load(AUTH_MODULE_DIR, NULL, &mod_set); -+ modules = module_dir_load("/etc/dovecot/modules/auth", NULL, &mod_set); - module_dir_init(modules); - - if (!worker) -@@ -223,7 +223,7 @@ void auth_module_load(const char *names) - mod_set.debug = global_auth_settings->debug; - mod_set.ignore_missing = TRUE; - -- modules = module_dir_load_missing(modules, AUTH_MODULE_DIR, names, -+ modules = module_dir_load_missing(modules, "/etc/dovecot/modules/auth", names, - &mod_set); - module_dir_init(modules); - } -diff --git a/src/config/all-settings.c b/src/config/all-settings.c -index 4a2ab53..5057d63 100644 ---- a/src/config/all-settings.c -+++ b/src/config/all-settings.c -@@ -1079,7 +1079,7 @@ static const struct mail_user_settings mail_user_default_settings = { - .last_valid_gid = 0, - - .mail_plugins = "", -- .mail_plugin_dir = MODULEDIR, -+ .mail_plugin_dir = "/etc/dovecot/modules", - - .mail_log_prefix = "%s(%u)<%{pid}><%{session}>: ", - -@@ -4723,7 +4723,7 @@ const struct doveadm_settings doveadm_default_settings = { - .base_dir = PKG_RUNDIR, - .libexec_dir = PKG_LIBEXECDIR, - .mail_plugins = "", -- .mail_plugin_dir = MODULEDIR, -+ .mail_plugin_dir = "/etc/dovecot/modules", - .auth_debug = FALSE, - .auth_socket_path = "auth-userdb", - .doveadm_socket_path = "doveadm-server", -diff --git a/src/config/config-parser.c b/src/config/config-parser.c -index 6894123..07e9fec 100644 ---- a/src/config/config-parser.c -+++ b/src/config/config-parser.c -@@ -1077,7 +1077,7 @@ void config_parse_load_modules(void) - - i_zero(&mod_set); - mod_set.abi_version = DOVECOT_ABI_VERSION; -- modules = module_dir_load(CONFIG_MODULE_DIR, NULL, &mod_set); -+ modules = module_dir_load("/etc/dovecot/modules/settings", NULL, &mod_set); - module_dir_init(modules); - - i_array_init(&new_roots, 64); -diff --git a/src/dict/main.c b/src/dict/main.c -index 722ed02..4ed12ae 100644 ---- a/src/dict/main.c -+++ b/src/dict/main.c -@@ -104,7 +104,7 @@ static void main_init(void) - mod_set.abi_version = DOVECOT_ABI_VERSION; - mod_set.require_init_funcs = TRUE; - -- modules = module_dir_load(DICT_MODULE_DIR, NULL, &mod_set); -+ modules = module_dir_load("/etc/dovecot/modules/dict", NULL, &mod_set); - module_dir_init(modules); - - /* Register only after loading modules. They may contain SQL drivers, -diff --git a/src/doveadm/doveadm-settings.c b/src/doveadm/doveadm-settings.c -index 88da40c..141ed05 100644 ---- a/src/doveadm/doveadm-settings.c -+++ b/src/doveadm/doveadm-settings.c -@@ -86,7 +86,7 @@ const struct doveadm_settings doveadm_default_settings = { - .base_dir = PKG_RUNDIR, - .libexec_dir = PKG_LIBEXECDIR, - .mail_plugins = "", -- .mail_plugin_dir = MODULEDIR, -+ .mail_plugin_dir = "/etc/dovecot/modules", - .auth_debug = FALSE, - .auth_socket_path = "auth-userdb", - .doveadm_socket_path = "doveadm-server", -diff --git a/src/lib-fs/fs-api.c b/src/lib-fs/fs-api.c -index a939f61..846cf86 100644 ---- a/src/lib-fs/fs-api.c -+++ b/src/lib-fs/fs-api.c -@@ -114,7 +114,7 @@ static void fs_class_try_load_plugin(const char *driver) - mod_set.abi_version = DOVECOT_ABI_VERSION; - mod_set.ignore_missing = TRUE; - -- fs_modules = module_dir_load_missing(fs_modules, MODULE_DIR, -+ fs_modules = module_dir_load_missing(fs_modules, "/etc/dovecot/modules", - module_name, &mod_set); - module_dir_init(fs_modules); - -diff --git a/src/lib-ssl-iostream/iostream-ssl.c b/src/lib-ssl-iostream/iostream-ssl.c -index f857ec9..0d1023b 100644 ---- a/src/lib-ssl-iostream/iostream-ssl.c -+++ b/src/lib-ssl-iostream/iostream-ssl.c -@@ -53,7 +53,7 @@ int ssl_module_load(const char **error_r) - mod_set.abi_version = DOVECOT_ABI_VERSION; - mod_set.setting_name = "<built-in lib-ssl-iostream lookup>"; - mod_set.require_init_funcs = TRUE; -- ssl_module = module_dir_load(MODULE_DIR, plugin_name, &mod_set); -+ ssl_module = module_dir_load("/etc/dovecot/modules", plugin_name, &mod_set); - if (module_dir_try_load_missing(&ssl_module, MODULE_DIR, plugin_name, - &mod_set, error_r) < 0) - return -1; -diff --git a/src/lib-storage/mail-storage-settings.c b/src/lib-storage/mail-storage-settings.c -index b314b52..7055094 100644 ---- a/src/lib-storage/mail-storage-settings.c -+++ b/src/lib-storage/mail-storage-settings.c -@@ -337,7 +337,7 @@ static const struct mail_user_settings mail_user_default_settings = { - .last_valid_gid = 0, - - .mail_plugins = "", -- .mail_plugin_dir = MODULEDIR, -+ .mail_plugin_dir = "/etc/dovecot/modules", - - .mail_log_prefix = "%s(%u)<%{pid}><%{session}>: ", - -diff --git a/src/lmtp/lmtp-settings.c b/src/lmtp/lmtp-settings.c -index 1666ec9..8a27200 100644 ---- a/src/lmtp/lmtp-settings.c -+++ b/src/lmtp/lmtp-settings.c -@@ -89,7 +89,7 @@ static const struct lmtp_settings lmtp_default_settings = { - .login_trusted_networks = "", - - .mail_plugins = "", -- .mail_plugin_dir = MODULEDIR, -+ .mail_plugin_dir = "/etc/dovecot/modules", - }; - - static const struct setting_parser_info *lmtp_setting_dependencies[] = { diff --git a/pkgs/servers/mail/dovecot/2.3.x-module_dir.patch b/pkgs/servers/mail/dovecot/2.3.x-module_dir.patch new file mode 100644 index 00000000000..0f987b44d8a --- /dev/null +++ b/pkgs/servers/mail/dovecot/2.3.x-module_dir.patch @@ -0,0 +1,165 @@ +diff -ru dovecot-2.3.9.2.orig/src/auth/main.c dovecot-2.3.9.2/src/auth/main.c +--- dovecot-2.3.9.2.orig/src/auth/main.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/auth/main.c 2019-12-15 19:46:52.101597499 +0100 +@@ -191,7 +191,7 @@ + mod_set.debug = global_auth_settings->debug; + mod_set.filter_callback = auth_module_filter; + +- modules = module_dir_load(AUTH_MODULE_DIR, NULL, &mod_set); ++ modules = module_dir_load("/etc/dovecot/modules/auth", NULL, &mod_set); + module_dir_init(modules); + + if (!worker) +@@ -222,7 +222,7 @@ + mod_set.debug = global_auth_settings->debug; + mod_set.ignore_missing = TRUE; + +- modules = module_dir_load_missing(modules, AUTH_MODULE_DIR, names, ++ modules = module_dir_load_missing(modules, "/etc/dovecot/modules/auth", names, + &mod_set); + module_dir_init(modules); + } +diff -ru dovecot-2.3.9.2.orig/src/config/all-settings.c dovecot-2.3.9.2/src/config/all-settings.c +--- dovecot-2.3.9.2.orig/src/config/all-settings.c 2019-12-13 14:12:32.000000000 +0100 ++++ dovecot-2.3.9.2/src/config/all-settings.c 2019-12-15 19:49:42.764650074 +0100 +@@ -1080,7 +1080,7 @@ + .last_valid_gid = 0, + + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + + .mail_log_prefix = "%s(%u)<%{pid}><%{session}>: ", + +@@ -3849,7 +3849,7 @@ + .login_log_format = "%$: %s", + .login_access_sockets = "", + .login_proxy_notify_path = "proxy-notify", +- .login_plugin_dir = MODULEDIR"/login", ++ .login_plugin_dir = "/etc/dovecot/modules""/login", + .login_plugins = "", + .login_proxy_max_disconnect_delay = 0, + .director_username_hash = "%u", +@@ -4058,7 +4058,7 @@ + .login_trusted_networks = "", + + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + }; + static const struct setting_parser_info *lmtp_setting_dependencies[] = { + &lda_setting_parser_info, +@@ -4823,7 +4823,7 @@ + .base_dir = PKG_RUNDIR, + .libexec_dir = PKG_LIBEXECDIR, + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + .mail_temp_dir = "/tmp", + .auth_debug = FALSE, + .auth_socket_path = "auth-userdb", +diff -ru dovecot-2.3.9.2.orig/src/config/config-parser.c dovecot-2.3.9.2/src/config/config-parser.c +--- dovecot-2.3.9.2.orig/src/config/config-parser.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/config/config-parser.c 2019-12-15 19:46:52.102597505 +0100 +@@ -1077,7 +1077,7 @@ + + i_zero(&mod_set); + mod_set.abi_version = DOVECOT_ABI_VERSION; +- modules = module_dir_load(CONFIG_MODULE_DIR, NULL, &mod_set); ++ modules = module_dir_load("/etc/dovecot/modules/settings", NULL, &mod_set); + module_dir_init(modules); + + i_array_init(&new_roots, 64); +diff -ru dovecot-2.3.9.2.orig/src/dict/main.c dovecot-2.3.9.2/src/dict/main.c +--- dovecot-2.3.9.2.orig/src/dict/main.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/dict/main.c 2019-12-15 19:46:52.102597505 +0100 +@@ -104,7 +104,7 @@ + mod_set.abi_version = DOVECOT_ABI_VERSION; + mod_set.require_init_funcs = TRUE; + +- modules = module_dir_load(DICT_MODULE_DIR, NULL, &mod_set); ++ modules = module_dir_load("/etc/dovecot/modules/dict", NULL, &mod_set); + module_dir_init(modules); + + /* Register only after loading modules. They may contain SQL drivers, +diff -ru dovecot-2.3.9.2.orig/src/doveadm/doveadm-settings.c dovecot-2.3.9.2/src/doveadm/doveadm-settings.c +--- dovecot-2.3.9.2.orig/src/doveadm/doveadm-settings.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/doveadm/doveadm-settings.c 2019-12-15 19:47:29.525812499 +0100 +@@ -89,7 +89,7 @@ + .base_dir = PKG_RUNDIR, + .libexec_dir = PKG_LIBEXECDIR, + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + .mail_temp_dir = "/tmp", + .auth_debug = FALSE, + .auth_socket_path = "auth-userdb", +diff -ru dovecot-2.3.9.2.orig/src/doveadm/doveadm-util.c dovecot-2.3.9.2/src/doveadm/doveadm-util.c +--- dovecot-2.3.9.2.orig/src/doveadm/doveadm-util.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/doveadm/doveadm-util.c 2019-12-15 19:52:32.003844670 +0100 +@@ -33,7 +33,7 @@ + mod_set.debug = doveadm_debug; + mod_set.ignore_dlopen_errors = TRUE; + +- modules = module_dir_load_missing(modules, DOVEADM_MODULEDIR, ++ modules = module_dir_load_missing(modules, "/etc/dovecot/modules/doveadm", + NULL, &mod_set); + module_dir_init(modules); + } +@@ -58,7 +58,7 @@ + return FALSE; + } + +- dir = opendir(DOVEADM_MODULEDIR); ++ dir = opendir("/etc/dovecot/modules/doveadm"); + if (dir == NULL) + return FALSE; + +diff -ru dovecot-2.3.9.2.orig/src/lib-fs/fs-api.c dovecot-2.3.9.2/src/lib-fs/fs-api.c +--- dovecot-2.3.9.2.orig/src/lib-fs/fs-api.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/lib-fs/fs-api.c 2019-12-15 19:46:52.102597505 +0100 +@@ -114,7 +114,7 @@ + mod_set.abi_version = DOVECOT_ABI_VERSION; + mod_set.ignore_missing = TRUE; + +- fs_modules = module_dir_load_missing(fs_modules, MODULE_DIR, ++ fs_modules = module_dir_load_missing(fs_modules, "/etc/dovecot/modules", + module_name, &mod_set); + module_dir_init(fs_modules); + +diff -ru dovecot-2.3.9.2.orig/src/lib-ssl-iostream/iostream-ssl.c dovecot-2.3.9.2/src/lib-ssl-iostream/iostream-ssl.c +--- dovecot-2.3.9.2.orig/src/lib-ssl-iostream/iostream-ssl.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/lib-ssl-iostream/iostream-ssl.c 2019-12-15 19:46:52.102597505 +0100 +@@ -54,7 +54,7 @@ + mod_set.abi_version = DOVECOT_ABI_VERSION; + mod_set.setting_name = "<built-in lib-ssl-iostream lookup>"; + mod_set.require_init_funcs = TRUE; +- ssl_module = module_dir_load(MODULE_DIR, plugin_name, &mod_set); ++ ssl_module = module_dir_load("/etc/dovecot/modules", plugin_name, &mod_set); + if (module_dir_try_load_missing(&ssl_module, MODULE_DIR, plugin_name, + &mod_set, error_r) < 0) + return -1; +diff -ru dovecot-2.3.9.2.orig/src/lib-storage/mail-storage-settings.c dovecot-2.3.9.2/src/lib-storage/mail-storage-settings.c +--- dovecot-2.3.9.2.orig/src/lib-storage/mail-storage-settings.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/lib-storage/mail-storage-settings.c 2019-12-15 19:46:52.102597505 +0100 +@@ -337,7 +337,7 @@ + .last_valid_gid = 0, + + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + + .mail_log_prefix = "%s(%u)<%{pid}><%{session}>: ", + +diff -ru dovecot-2.3.9.2.orig/src/lmtp/lmtp-settings.c dovecot-2.3.9.2/src/lmtp/lmtp-settings.c +--- dovecot-2.3.9.2.orig/src/lmtp/lmtp-settings.c 2019-12-13 14:12:00.000000000 +0100 ++++ dovecot-2.3.9.2/src/lmtp/lmtp-settings.c 2019-12-15 19:46:52.102597505 +0100 +@@ -95,7 +95,7 @@ + .login_trusted_networks = "", + + .mail_plugins = "", +- .mail_plugin_dir = MODULEDIR, ++ .mail_plugin_dir = "/etc/dovecot/modules", + }; + + static const struct setting_parser_info *lmtp_setting_dependencies[] = { diff --git a/pkgs/servers/mail/dovecot/default.nix b/pkgs/servers/mail/dovecot/default.nix index 35c274eff25..3aff9f53ce7 100644 --- a/pkgs/servers/mail/dovecot/default.nix +++ b/pkgs/servers/mail/dovecot/default.nix @@ -9,7 +9,7 @@ }: stdenv.mkDerivation rec { - name = "dovecot-2.3.8"; + name = "dovecot-2.3.9.2"; nativeBuildInputs = [ perl pkgconfig ]; buildInputs = @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://dovecot.org/releases/2.3/${name}.tar.gz"; - sha256 = "0jdng27hqqagjy6v7ymd0xflbv5dbc1rhh450nk39ar6pw1qsxy5"; + sha256 = "1yc6hi4hqg4hcc4495sf4m5f1lnargphi6dawj43if21vncgp127"; }; enableParallelBuilding = true; @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { # Make dovecot look for plugins in /etc/dovecot/modules # so we can symlink plugins from several packages there. # The symlinking needs to be done in NixOS. - ./2.2.x-module_dir.patch + ./2.3.x-module_dir.patch ]; configureFlags = [ diff --git a/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix b/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix index 4184771f8a8..71a5c20dea3 100644 --- a/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix +++ b/pkgs/servers/mail/dovecot/plugins/pigeonhole/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "dovecot-pigeonhole"; - version = "0.5.8"; + version = "0.5.9"; src = fetchurl { url = "https://pigeonhole.dovecot.org/releases/2.3/dovecot-2.3-pigeonhole-${version}.tar.gz"; - sha256 = "08lhfl877xm790f1mqdhvz74xqr2kkl8wpz2m6p0j6hv1kan1f4g"; + sha256 = "01dxidrnmrr2gqggfsgkfxa6ynvyjyw13xw32gi86yqmwnm6inin"; }; buildInputs = [ dovecot openssl ]; diff --git a/pkgs/servers/mail/spamassassin/default.nix b/pkgs/servers/mail/spamassassin/default.nix index 186f4670153..95d39c999ee 100644 --- a/pkgs/servers/mail/spamassassin/default.nix +++ b/pkgs/servers/mail/spamassassin/default.nix @@ -2,18 +2,19 @@ perlPackages.buildPerlPackage rec { pname = "SpamAssassin"; - version = "3.4.2"; + version = "3.4.3"; src = fetchurl { url = "mirror://apache/spamassassin/source/Mail-${pname}-${version}.tar.bz2"; - sha256 = "1np8h293bzg33i0xn9gj9krwgr7k6xbyf1yhxr2j2xci95d080yg"; + sha256 = "1380cmrgjsyidnznr844c5yr9snz36dw7xchdfryi2s61vjzvf55"; }; # https://bz.apache.org/SpamAssassin/show_bug.cgi?id=7434 patches = [ ./sa-update_add--siteconfigpath.patch ]; buildInputs = [ makeWrapper ] ++ (with perlPackages; [ HTMLParser NetDNS NetAddrIP DBFile HTTPDate MailDKIM - LWP IOSocketSSL DBI EncodeDetect IPCountry NetIdent Razor2ClientAgent MailSPF NetDNSResolverProgrammable ]); + LWP IOSocketSSL DBI EncodeDetect IPCountry NetIdent Razor2ClientAgent MailSPF NetDNSResolverProgrammable + Socket6 ]); # Enabling 'taint' mode is desirable, but that flag disables support # for the PERL5LIB environment variable. Needs further investigation. diff --git a/pkgs/servers/matrix-synapse/default.nix b/pkgs/servers/matrix-synapse/default.nix index b9f4cb38742..30ccf6512f2 100644 --- a/pkgs/servers/matrix-synapse/default.nix +++ b/pkgs/servers/matrix-synapse/default.nix @@ -1,5 +1,5 @@ { lib, stdenv, python3, openssl -, enableSystemd ? stdenv.isLinux +, enableSystemd ? stdenv.isLinux, nixosTests }: with python3.pkgs; @@ -7,11 +7,11 @@ with python3.pkgs; let matrix-synapse-ldap3 = buildPythonPackage rec { pname = "matrix-synapse-ldap3"; - version = "0.1.3"; + version = "0.1.4"; src = fetchPypi { inherit pname version; - sha256 = "0a0d1y9yi0abdkv6chbmxr3vk36gynnqzrjhbg26q4zg06lh9kgn"; + sha256 = "01bms89sl16nyh9f141idsz4mnhxvjrc3gj721wxh1fhikps0djx"; }; propagatedBuildInputs = [ service-identity ldap3 twisted ]; @@ -23,11 +23,11 @@ let in buildPythonApplication rec { pname = "matrix-synapse"; - version = "1.5.1"; + version = "1.7.1"; src = fetchPypi { inherit pname version; - sha256 = "14c9wjp3w9m8hnm91r2a33lvd3avq5xx759dy23wmmh0z8xf0k4a"; + sha256 = "1aix4n4nk90xh6y3w3gvq3wzvykzz7mhj9isl437nid7mf9mcj6n"; }; patches = [ @@ -78,6 +78,8 @@ in buildPythonApplication rec { doCheck = !stdenv.isDarwin; + passthru.tests = { inherit (nixosTests) matrix-synapse; }; + checkPhase = '' PYTHONPATH=".:$PYTHONPATH" ${python3.interpreter} -m twisted.trial tests ''; diff --git a/pkgs/servers/matrix-synapse/matrix-appservice-slack/node-packages.nix b/pkgs/servers/matrix-synapse/matrix-appservice-slack/node-packages.nix index 6cbcd4d38f7..d46e3d75f02 100644 --- a/pkgs/servers/matrix-synapse/matrix-appservice-slack/node-packages.nix +++ b/pkgs/servers/matrix-synapse/matrix-appservice-slack/node-packages.nix @@ -22,13 +22,13 @@ let sha512 = "7dV4eu9gBxoM0dAnj/BCFDW9LFU0zvTrkq0ugM7pnHEgguOEeOz1so2ZghEdzviYzQEED0r4EAgpsBChKy1TRQ=="; }; }; - "@slack/logger-1.1.0" = { + "@slack/logger-1.1.1" = { name = "_at_slack_slash_logger"; packageName = "@slack/logger"; - version = "1.1.0"; + version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/@slack/logger/-/logger-1.1.0.tgz"; - sha512 = "D3tabyLoUrsFy0w3koxaCVv+5ZJfIy+j0QW3PUq0XO3UiVuF5rtpAbqngAYVpeKnxPpqBjeth4XJ3tllKoW3aA=="; + url = "https://registry.npmjs.org/@slack/logger/-/logger-1.1.1.tgz"; + sha512 = "PAC5CMnNAv/FPtJ0le+YD2wUV+tZ7n3Bnjj9dBI+deIcHsExCnQkQmZE79cLvfuYXbz3PWyv5coti30MJQhEjA=="; }; }; "@slack/rtm-api-5.0.3" = { @@ -40,22 +40,22 @@ let sha512 = "rzNIFst8iuVYyHdE7e3KSrbAtIA7sfS4Pth9ObKUm5KDemX0zyI7YfAijO1kgr1EMriQkjlpKBhlNq9Y+aQr6g=="; }; }; - "@slack/types-1.2.1" = { + "@slack/types-1.3.0" = { name = "_at_slack_slash_types"; packageName = "@slack/types"; - version = "1.2.1"; + version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/@slack/types/-/types-1.2.1.tgz"; - sha512 = "NyGh7MibW+a0OHkwwOPlv63hC639dzQdkFy4dj0tl4sAdZR4OBaE/OhXixKhCzcT3kJsPXaQmvkUN7sqSf52iA=="; + url = "https://registry.npmjs.org/@slack/types/-/types-1.3.0.tgz"; + sha512 = "3AjHsDJjJKT3q0hQzFHQN7piYIh99LuN7Po56W/R6P/uscqZqwS5xm1U1cTYGIzk8fmsuW7TvWVg0W85hKY/MQ=="; }; }; - "@slack/web-api-5.2.1" = { + "@slack/web-api-5.6.0" = { name = "_at_slack_slash_web-api"; packageName = "@slack/web-api"; - version = "5.2.1"; + version = "5.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/@slack/web-api/-/web-api-5.2.1.tgz"; - sha512 = "YobhBNMwEFZvfvOIBNU+GNyOqUa/S1rdiWliESYAq9ZcUXGblgEYIL3sxKwuNQckBjCgSYzexT3+nX5dSepwJg=="; + url = "https://registry.npmjs.org/@slack/web-api/-/web-api-5.6.0.tgz"; + sha512 = "/HxTI9/4fMk3su1UAa7oN0n8fGSZLHXGUne3WJ+vjxGek2rvvzazqL6yTRWWWcpttPtsNyjk4KI9FkPq+6yLNg=="; }; }; "@types/body-parser-1.17.1" = { @@ -76,13 +76,13 @@ let sha512 = "6ckxMjBBD8URvjB6J3NcnuAn5Pkl7t3TizAg+xdlzzQGSPSmBcXf8KoIH0ua/i+tio+ZRUHEXp0HEmvaR4kt0w=="; }; }; - "@types/chai-4.2.3" = { + "@types/chai-4.2.6" = { name = "_at_types_slash_chai"; packageName = "@types/chai"; - version = "4.2.3"; + version = "4.2.6"; src = fetchurl { - url = "https://registry.npmjs.org/@types/chai/-/chai-4.2.3.tgz"; - sha512 = "VRw2xEGbll3ZiTQ4J02/hUjNqZoue1bMhoo2dgM2LXjDdyaq4q80HgBDHwpI0/VKlo4Eg+BavyQMv/NYgTetzA=="; + url = "https://registry.npmjs.org/@types/chai/-/chai-4.2.6.tgz"; + sha512 = "HF8faEUA4JurIm+68VaA2KedtZf5LYdXpQEAbIAN79DwWQbO82BNTksZgCH3UMqbZHXex9C6TrBfg7OUInRISQ=="; }; }; "@types/connect-3.4.32" = { @@ -103,22 +103,22 @@ let sha512 = "EaObqwIvayI5a8dCzhFrjKzVwKLxjoG9T6Ppd5CEo07LRKfQ8Yokw54r5+Wq7FaBQ+yXRvQAYPrHwya1/UFt9g=="; }; }; - "@types/express-4.17.1" = { + "@types/express-4.17.2" = { name = "_at_types_slash_express"; packageName = "@types/express"; - version = "4.17.1"; + version = "4.17.2"; src = fetchurl { - url = "https://registry.npmjs.org/@types/express/-/express-4.17.1.tgz"; - sha512 = "VfH/XCP0QbQk5B5puLqTLEeFgR8lfCJHZJKkInZ9mkYd+u8byX0kztXEQxEk4wZXJs8HI+7km2ALXjn4YKcX9w=="; + url = "https://registry.npmjs.org/@types/express/-/express-4.17.2.tgz"; + sha512 = "5mHFNyavtLoJmnusB8OKJ5bshSzw+qkMIBAobLrIM48HJvunFva9mOa6aBwh64lBFyNwBbs0xiEFuj4eU/NjCA=="; }; }; - "@types/express-serve-static-core-4.16.9" = { + "@types/express-serve-static-core-4.17.0" = { name = "_at_types_slash_express-serve-static-core"; packageName = "@types/express-serve-static-core"; - version = "4.16.9"; + version = "4.17.0"; src = fetchurl { - url = "https://registry.npmjs.org/@types/express-serve-static-core/-/express-serve-static-core-4.16.9.tgz"; - sha512 = "GqpaVWR0DM8FnRUJYKlWgyARoBUAVfRIeVDZQKOttLFp5SmhhF9YFIYeTPwMd/AXfxlP7xVO2dj1fGu0Q+krKQ=="; + url = "https://registry.npmjs.org/@types/express-serve-static-core/-/express-serve-static-core-4.17.0.tgz"; + sha512 = "Xnub7w57uvcBqFdIGoRg1KhNOeEj0vB6ykUM7uFWyxvbdE89GFyqgmUcanAriMr4YOxNFZBAWkfcWIb4WBPt3g=="; }; }; "@types/is-stream-1.1.0" = { @@ -157,13 +157,13 @@ let sha512 = "w9Tl3DQCkdT0Ghes+PKhe+3/pZppBXuFFpSCjPJbb2KE3DjYmUpEyCYzjrAYlT9Y1TndnbbnChzkax2h/JorVQ=="; }; }; - "@types/node-12.7.11" = { + "@types/node-12.12.14" = { name = "_at_types_slash_node"; packageName = "@types/node"; - version = "12.7.11"; + version = "12.12.14"; src = fetchurl { - url = "https://registry.npmjs.org/@types/node/-/node-12.7.11.tgz"; - sha512 = "Otxmr2rrZLKRYIybtdG/sgeO+tHY20GxeDjcGmUnmmlCWyEnv2a2x1ZXBo3BTec4OiTXMQCiazB8NMBf0iRlFw=="; + url = "https://registry.npmjs.org/@types/node/-/node-12.12.14.tgz"; + sha512 = "u/SJDyXwuihpwjXy7hOOghagLEV1KdAST6syfnOk6QZAMzZuWZqXy5aYYZbh8Jdpd4escVFP0MvftHNDb9pruA=="; }; }; "@types/node-emoji-1.8.1" = { @@ -238,22 +238,22 @@ let sha512 = "oprSwp094zOglVrXdlo/4bAHtKTAxX6VT8FOZlBKrmyLbNvE1zxZyJ6yikMVtHIvwP45+ZQGJn+FdXGKTozq0g=="; }; }; - "@types/tough-cookie-2.3.5" = { + "@types/tough-cookie-2.3.6" = { name = "_at_types_slash_tough-cookie"; packageName = "@types/tough-cookie"; - version = "2.3.5"; + version = "2.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/@types/tough-cookie/-/tough-cookie-2.3.5.tgz"; - sha512 = "SCcK7mvGi3+ZNz833RRjFIxrn4gI1PPR3NtuIS+6vMkvmsGjosqTJwRt5bAEFLRz+wtJMWv8+uOnZf2hi2QXTg=="; + url = "https://registry.npmjs.org/@types/tough-cookie/-/tough-cookie-2.3.6.tgz"; + sha512 = "wHNBMnkoEBiRAd3s8KTKwIuO9biFtTf0LehITzBhSco+HQI0xkXZbLOD55SW3Aqw3oUkHstkm5SPv58yaAdFPQ=="; }; }; - "@types/uuid-3.4.5" = { + "@types/uuid-3.4.6" = { name = "_at_types_slash_uuid"; packageName = "@types/uuid"; - version = "3.4.5"; + version = "3.4.6"; src = fetchurl { - url = "https://registry.npmjs.org/@types/uuid/-/uuid-3.4.5.tgz"; - sha512 = "MNL15wC3EKyw1VLF+RoVO4hJJdk9t/Hlv3rt1OL65Qvuadm4BYo6g9ZJQqoq7X8NBFSsQXgAujWciovh2lpVjA=="; + url = "https://registry.npmjs.org/@types/uuid/-/uuid-3.4.6.tgz"; + sha512 = "cCdlC/1kGEZdEglzOieLDYBxHsvEOIg7kp/2FYyVR9Pxakq+Qf/inL3RKQ+PA8gOlI/NnL+fXmQH12nwcGzsHw=="; }; }; "@types/ws-5.1.2" = { @@ -365,13 +365,13 @@ let sha512 = "VT0ZI6kZRdTh8YyJw3SMbYm/u+NqfsAxEpWO0Pf9sq8/e94WxxOpPKx9FR1FlyCtOVDNOQ+8ntlqFxiRc+r5qA=="; }; }; - "arg-4.1.1" = { + "arg-4.1.2" = { name = "arg"; packageName = "arg"; - version = "4.1.1"; + version = "4.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/arg/-/arg-4.1.1.tgz"; - sha512 = "SlmP3fEA88MBv0PypnXZ8ZfJhwmDeIE3SP71j37AiXQBXYosPV0x6uISAaHYSlSVhmHOVkomen0tbGk6Anlebw=="; + url = "https://registry.npmjs.org/arg/-/arg-4.1.2.tgz"; + sha512 = "+ytCkGcBtHZ3V2r2Z06AncYO8jz46UEamcspGoU8lHcEbpn6J77QK0vdWvChsclg/tM5XIJC5tnjmPp7Eq6Obg=="; }; }; "argparse-1.0.10" = { @@ -482,13 +482,13 @@ let sha1 = "b46e890934a9591f2d2f6f86d7e6a9f1b3fe76a8"; }; }; - "aws4-1.8.0" = { + "aws4-1.9.0" = { name = "aws4"; packageName = "aws4"; - version = "1.8.0"; + version = "1.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/aws4/-/aws4-1.8.0.tgz"; - sha512 = "ReZxvNHIOv88FlT7rxcXIIC0fPt4KZqZbOlivyWtXLt8ESx84zd3kMC6iK5jVeS2qt+g7ftS7ye4fi06X5rtRQ=="; + url = "https://registry.npmjs.org/aws4/-/aws4-1.9.0.tgz"; + sha512 = "Uvq6hVe90D0B2WEnUqtdgY1bATGz3mw33nH9Y+dmA+w5DHvUmBgkr5rM/KCHpCsiFNRUfokW/szpPPgMK2hm4A=="; }; }; "axios-0.18.1" = { @@ -572,13 +572,13 @@ let sha1 = "534b9033c022c9579c56ba3b3e5a5caafbb650e1"; }; }; - "bluebird-3.7.0" = { + "bluebird-3.5.5" = { name = "bluebird"; packageName = "bluebird"; - version = "3.7.0"; + version = "3.5.5"; src = fetchurl { - url = "https://registry.npmjs.org/bluebird/-/bluebird-3.7.0.tgz"; - sha512 = "aBQ1FxIa7kSWCcmKHlcHFlT2jt6J/l4FzC7KcPELkOJOsPOb/bccdhmIrKDfXhwFrmc7vDoDrrepFvGqjyXGJg=="; + url = "https://registry.npmjs.org/bluebird/-/bluebird-3.5.5.tgz"; + sha512 = "5am6HnnfN+urzt4yfg7IgTbotDjIT/u8AJpEt0sIU9FtXfVeezXAPKswrG+xKUCOYAINpSdgZVDU6QFh+cuH3w=="; }; }; "body-parser-1.19.0" = { @@ -788,13 +788,13 @@ let sha512 = "FQN4MRfuJeHf7cBbBMJFXhKSDq+2kAArBlmRBvcvFE5BB1HZKXtSFASDhdlz9zOYwxh8lDdnvmMOe/+5cdoEdg=="; }; }; - "commander-2.20.1" = { + "commander-2.20.3" = { name = "commander"; packageName = "commander"; - version = "2.20.1"; + version = "2.20.3"; src = fetchurl { - url = "https://registry.npmjs.org/commander/-/commander-2.20.1.tgz"; - sha512 = "cCuLsMhJeWQ/ZpsFTbE765kvVfoeSddc4nU3up4fV+fDBcfUXnbITJ+JzhkdjzOqhURjZgujxaioam4RM9yGUg=="; + url = "https://registry.npmjs.org/commander/-/commander-2.20.3.tgz"; + sha512 = "GpVkmM8vF2vQUkj2LvZmD35JxeJOLCwJ9cUkugyk2nuhbv3+mJvpLYYt+0+USMxE+oj+ey/lJEnhZw75x/OMcQ=="; }; }; "concat-map-0.0.1" = { @@ -842,13 +842,13 @@ let sha1 = "e303a882b342cc3ee8ca513a79999734dab3ae2c"; }; }; - "core-js-2.6.9" = { + "core-js-2.6.10" = { name = "core-js"; packageName = "core-js"; - version = "2.6.9"; + version = "2.6.10"; src = fetchurl { - url = "https://registry.npmjs.org/core-js/-/core-js-2.6.9.tgz"; - sha512 = "HOpZf6eXmnl7la+cUdMnLvUxKNqLUzJvgIziQ0DiF3JwSImNphIqdGqzj6hIKyX04MmV0poclQ7+wjWvxQyR2A=="; + url = "https://registry.npmjs.org/core-js/-/core-js-2.6.10.tgz"; + sha512 = "I39t74+4t+zau64EN1fE5v2W31Adtc/REhzWN+gWRRXg6WH5qAsZm62DHpQ1+Yhe4047T55jvzz7MUqF/dBBlA=="; }; }; "core-util-is-1.0.2" = { @@ -1040,22 +1040,22 @@ let sha512 = "zoB603vQReOFvTg5xMl9I1P2PnHsHQQKTEowsKKD7nseUfJq6UWzK+4YtlWUO1nhiQUxe6XMkk+JleSZD1NZFA=="; }; }; - "es-abstract-1.15.0" = { + "es-abstract-1.16.3" = { name = "es-abstract"; packageName = "es-abstract"; - version = "1.15.0"; + version = "1.16.3"; src = fetchurl { - url = "https://registry.npmjs.org/es-abstract/-/es-abstract-1.15.0.tgz"; - sha512 = "bhkEqWJ2t2lMeaJDuk7okMkJWI/yqgH/EoGwpcvv0XW9RWQsRspI4wt6xuyuvMvvQE3gg/D9HXppgk21w78GyQ=="; + url = "https://registry.npmjs.org/es-abstract/-/es-abstract-1.16.3.tgz"; + sha512 = "WtY7Fx5LiOnSYgF5eg/1T+GONaGmpvpPdCpSnYij+U2gDTL0UPfWrhDw7b2IYb+9NQJsYpCA0wOQvZfsd6YwRw=="; }; }; - "es-to-primitive-1.2.0" = { + "es-to-primitive-1.2.1" = { name = "es-to-primitive"; packageName = "es-to-primitive"; - version = "1.2.0"; + version = "1.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/es-to-primitive/-/es-to-primitive-1.2.0.tgz"; - sha512 = "qZryBOJjV//LaxLTV6UC//WewneB3LcXOL9NP++ozKVXsIIIpm/2c13UDiD9Jp2eThsecw9m3jPqDwTyobcdbg=="; + url = "https://registry.npmjs.org/es-to-primitive/-/es-to-primitive-1.2.1.tgz"; + sha512 = "QCOllgZJtaUo9miYBcLChTUaHNjJF3PYs1VidD7AwiEj1kYxKeQTctLAezAOH5ZKRH0g2IgPn6KwB4IT8iRpvA=="; }; }; "escape-html-1.0.3" = { @@ -1409,13 +1409,13 @@ let sha1 = "b5d454dc2199ae225699f3467e5a07f3b955bafd"; }; }; - "has-symbols-1.0.0" = { + "has-symbols-1.0.1" = { name = "has-symbols"; packageName = "has-symbols"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/has-symbols/-/has-symbols-1.0.0.tgz"; - sha1 = "ba1a8f1af2a0fc39650f5c850367704122063b44"; + url = "https://registry.npmjs.org/has-symbols/-/has-symbols-1.0.1.tgz"; + sha512 = "PLcsoqu++dmEIZB+6totNFKq/7Do+Z0u4oT0zKOJNl3lYK6vGwwu2hjHs+68OEZbTjiUE9bgOABXbP/GvrS0Kg=="; }; }; "he-1.2.0" = { @@ -1580,13 +1580,13 @@ let sha1 = "12d4a3dd4e68e0b79ceb8dbc84173ae80d91ca44"; }; }; - "is-symbol-1.0.2" = { + "is-symbol-1.0.3" = { name = "is-symbol"; packageName = "is-symbol"; - version = "1.0.2"; + version = "1.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/is-symbol/-/is-symbol-1.0.2.tgz"; - sha512 = "HS8bZ9ox60yCJLH9snBpIwv9pYUAkcuLhSA1oero1UB5y9aiQpRA8y2ex945AOtCZL1lJDeIk3G5LthswI46Lw=="; + url = "https://registry.npmjs.org/is-symbol/-/is-symbol-1.0.3.tgz"; + sha512 = "OwijhaRSgqvhm/0ZdAcXNZt9lYdKFpcRDT5ULUuYXPoT794UNOdU+gpT6Rzo7b4V2HUl/op6GqY894AZwv9faQ=="; }; }; "is-typedarray-1.0.0" = { @@ -1778,13 +1778,13 @@ let sha512 = "+lZh4OpERDBLqjiwDLpAWNQu6KMjnlXH2ByZwCuSqVPJletw0kTWJf5CgSNAUKn1KUkv3m2cUz/LK8zyEy7wzQ=="; }; }; - "loglevel-1.6.1" = { + "loglevel-1.6.6" = { name = "loglevel"; packageName = "loglevel"; - version = "1.6.1"; + version = "1.6.6"; src = fetchurl { - url = "https://registry.npmjs.org/loglevel/-/loglevel-1.6.1.tgz"; - sha1 = "e0fc95133b6ef276cdc8887cdaf24aa6f156f8fa"; + url = "https://registry.npmjs.org/loglevel/-/loglevel-1.6.6.tgz"; + sha512 = "Sgr5lbboAUBo3eXCSPL4/KoVz3ROKquOjcctxmHIt+vol2DrqTQe3SwkKKuYhEiWB5kYa13YyopJ69deJ1irzQ=="; }; }; "make-error-1.3.5" = { @@ -1805,31 +1805,31 @@ let sha512 = "pfDSB7QYoVg0Io4KMV9hhPoXpj6p0uBscgtyUSKCOFZe8bqgbpStfgnKIbF/ulnr6U3ICu4OqdyxAqBgOhZwBQ=="; }; }; - "matrix-appservice-0.3.5" = { + "matrix-appservice-0.4.1" = { name = "matrix-appservice"; packageName = "matrix-appservice"; - version = "0.3.5"; + version = "0.4.1"; src = fetchurl { - url = "https://registry.npmjs.org/matrix-appservice/-/matrix-appservice-0.3.5.tgz"; - sha512 = "oQcxlpERcUj90QbGjV7t5Ly5/Aze/sUwB9ZrIt1UMFwuNT+CgEzA7cxLDHAiJkXfgoNzFvjVnKJ3203oIuLONQ=="; + url = "https://registry.npmjs.org/matrix-appservice/-/matrix-appservice-0.4.1.tgz"; + sha512 = "mxHr9XDOvN/p6OFrfb4kkcEjCPftnXNzMS8Lg9Cz/pDy1arfRWq11vl9pL9bjzBaAouBGLpW1JzmCR2MsW+VKA=="; }; }; - "matrix-appservice-bridge-1.10.3" = { + "matrix-appservice-bridge-1.11.1" = { name = "matrix-appservice-bridge"; packageName = "matrix-appservice-bridge"; - version = "1.10.3"; + version = "1.11.1"; src = fetchurl { - url = "https://registry.npmjs.org/matrix-appservice-bridge/-/matrix-appservice-bridge-1.10.3.tgz"; - sha512 = "PqAExCsokZOAnY/d2uqTmB7sCVNKDSHZ9R1V8hDNr6rtMUmO3jIuuKNuwFudeOGL2iYcqzB+s8tCz7yh9a3dew=="; + url = "https://registry.npmjs.org/matrix-appservice-bridge/-/matrix-appservice-bridge-1.11.1.tgz"; + sha512 = "xrtjxScBIx33HRkiK/5G6wkUxZ9jxF9GqTiKzM/Fn7CgMZoHVDIms3sTc7ybZKA6RHAqH68bg4Eg4JbGCtUrhw=="; }; }; - "matrix-js-sdk-2.4.1" = { + "matrix-js-sdk-2.4.5" = { name = "matrix-js-sdk"; packageName = "matrix-js-sdk"; - version = "2.4.1"; + version = "2.4.5"; src = fetchurl { - url = "https://registry.npmjs.org/matrix-js-sdk/-/matrix-js-sdk-2.4.1.tgz"; - sha512 = "5mOp396eOtvaMiuUD85TWvuxSP532PuvtH/QLugBGenI15FGwtnC40cTnVYviYWGBi340FPrOKWulc5ILRX6qQ=="; + url = "https://registry.npmjs.org/matrix-js-sdk/-/matrix-js-sdk-2.4.5.tgz"; + sha512 = "Mh0fPoiqyXRksFNYS4/2s20xAklmYVIgSms3qFvLhno32LN43NizUoAMBYYGtyjt8BQi+U77lbNL0s5f2V7gPQ=="; }; }; "media-typer-0.3.0" = { @@ -1868,22 +1868,22 @@ let sha512 = "x0Vn8spI+wuJ1O6S7gnbaQg8Pxh4NNHb7KSINmEWKiPE4RKOplvijn+NkmYmmRgP68mc70j2EbeTFRsrswaQeg=="; }; }; - "mime-db-1.40.0" = { + "mime-db-1.42.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.40.0"; + version = "1.42.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.40.0.tgz"; - sha512 = "jYdeOMPy9vnxEqFRRo6ZvTZ8d9oPb+k18PKoYNYUe2stVEBPPwsln/qWzdbmaIvnhZ9v2P+CuecK+fpUfsV2mA=="; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.42.0.tgz"; + sha512 = "UbfJCR4UAVRNgMpfImz05smAXK7+c+ZntjaA26ANtkXLlOe947Aag5zdIcKQULAiF9Cq4WxBi9jUs5zkA84bYQ=="; }; }; - "mime-types-2.1.24" = { + "mime-types-2.1.25" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.24"; + version = "2.1.25"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.24.tgz"; - sha512 = "WaFHS3MCl5fapm3oLxU4eYDw77IQM2ACcxQ9RIxfaC3ooc6PFuBMGZZsYpvoXS5D5QTWPieo1jjLdAm3TBP3cQ=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.25.tgz"; + sha512 = "5KhStqB5xpTAeGqKBAMgwaYMnQik7teQN4IAzC7npDv6kzeU6prfkR67bc87J1kWMPGkoaZSq1npmexMgkmEVg=="; }; }; "minimatch-3.0.4" = { @@ -1922,13 +1922,13 @@ let sha1 = "30057438eac6cf7f8c4767f38648d6697d75c903"; }; }; - "mocha-6.2.1" = { + "mocha-6.2.2" = { name = "mocha"; packageName = "mocha"; - version = "6.2.1"; + version = "6.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/mocha/-/mocha-6.2.1.tgz"; - sha512 = "VCcWkLHwk79NYQc8cxhkmI8IigTIhsCwZ6RTxQsqK6go4UvEhzJkYuHm8B2YtlSxcYq2fY+ucr4JBwoD6ci80A=="; + url = "https://registry.npmjs.org/mocha/-/mocha-6.2.2.tgz"; + sha512 = "FgDS9Re79yU1xz5d+C4rv1G7QagNGHZ+iXF81hO8zY35YZZcLEsJVfFolfsqKFWunATEvNzMK0r/CwWd/szO9A=="; }; }; "moment-2.24.0" = { @@ -2039,13 +2039,13 @@ let sha512 = "OSuu/pU4ENM9kmREg0BdNrUDIl1heYa4mBZacJc+vVWz4GtAwu7jO8s4AIt2aGRUTqxykpWzI3Oqnsm13tTMDA=="; }; }; - "object-inspect-1.6.0" = { + "object-inspect-1.7.0" = { name = "object-inspect"; packageName = "object-inspect"; - version = "1.6.0"; + version = "1.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/object-inspect/-/object-inspect-1.6.0.tgz"; - sha512 = "GJzfBZ6DgDAmnuaM3104jR4s1Myxr3Y3zfIyN4z3UdqN69oSRacNK8UhnobDdC+7J2AHCjGwxQubNJfE70SXXQ=="; + url = "https://registry.npmjs.org/object-inspect/-/object-inspect-1.7.0.tgz"; + sha512 = "a7pEHdh1xKIAgTySUGgLMx/xwDZskN1Ud6egYYN3EdRW4ZMPNEDUTF+hwy2LUC+Bl+SyLXANnwz/jyh/qutKUw=="; }; }; "object-keys-1.1.1" = { @@ -2156,22 +2156,22 @@ let sha512 = "n8/y+yDJwBjoLQe1GSJbbaYQLTI7QHNZI2+rpmCDbe++WLf9HC3gf6iqj5yfPAV71W4UF3ql5W1+UBPXoXTxng=="; }; }; - "p-queue-6.1.1" = { + "p-queue-6.2.1" = { name = "p-queue"; packageName = "p-queue"; - version = "6.1.1"; + version = "6.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/p-queue/-/p-queue-6.1.1.tgz"; - sha512 = "R9gq36Th88xZ+rWAptN5IXLwqkwA1gagCQhT6ZXQ6RxEfmjb9ZW+UBzRVqv9sm5TQmbbI/TsKgGLbOaA61xR5w=="; + url = "https://registry.npmjs.org/p-queue/-/p-queue-6.2.1.tgz"; + sha512 = "wV8yC/rkuWpgu9LGKJIb48OynYSrE6lVl2Bx6r8WjbyVKrFAzzQ/QevAvwnDjlD+mLt8xy0LTDOU1freOvMTCg=="; }; }; - "p-retry-4.1.0" = { + "p-retry-4.2.0" = { name = "p-retry"; packageName = "p-retry"; - version = "4.1.0"; + version = "4.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/p-retry/-/p-retry-4.1.0.tgz"; - sha512 = "oepllyG9gX1qH4Sm20YAKxg1GA7L7puhvGnTfimi31P07zSIj7SDV6YtuAx9nbJF51DES+2CIIRkXs8GKqWJxA=="; + url = "https://registry.npmjs.org/p-retry/-/p-retry-4.2.0.tgz"; + sha512 = "jPH38/MRh263KKcq0wBNOGFJbm+U6784RilTmHjB/HM9kH9V8WlCpVUcdOmip9cjXOh6MxZ5yk1z2SjDUJfWmA=="; }; }; "p-timeout-3.2.0" = { @@ -2309,13 +2309,13 @@ let sha512 = "UiJyO5B9zZpu32GSlP0tXy8J2NsJ9EFGFfz5v6PSbdz/1hBLX1rNiiy5+mAm5iJJYwfCv4A0EBcQLGWwjbpzZw=="; }; }; - "pg-promise-9.3.3" = { + "pg-promise-9.3.6" = { name = "pg-promise"; packageName = "pg-promise"; - version = "9.3.3"; + version = "9.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/pg-promise/-/pg-promise-9.3.3.tgz"; - sha512 = "C7Mj5RSUvK0cGOaJ0p1fcOk5jhS1n+HgY+DoE8s1+Zjzf6ta70zYDIlOmy6MtYWs4DFHhUW654hb0FmtGKkIkg=="; + url = "https://registry.npmjs.org/pg-promise/-/pg-promise-9.3.6.tgz"; + sha512 = "b64UalKAkUImn01z7LeG2NtTTsp0TYfqMzo1vXjO2bDAshL+kXJ2HvCyHstJ4Nj8hLeqtCe0Tar5TbB4QGUHfw=="; }; }; "pg-types-2.2.0" = { @@ -2399,13 +2399,13 @@ let sha512 = "t/7RxHXPH6cJtP0pRG6smSr9QJidhB+3kXu0KgXnbGYMgzEnUxRQ4/LDdfOwZEMyIh3/xHb8PX3t+lfL9z+YVQ=="; }; }; - "psl-1.4.0" = { + "psl-1.6.0" = { name = "psl"; packageName = "psl"; - version = "1.4.0"; + version = "1.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/psl/-/psl-1.4.0.tgz"; - sha512 = "HZzqCGPecFLyoRj5HLfuDSKYTJkAfB5thKBIkRHtGjWwY7p1dAyveIbXIq4tO0KYfDF2tHqPUgY9SDnGm00uFw=="; + url = "https://registry.npmjs.org/psl/-/psl-1.6.0.tgz"; + sha512 = "SYKKmVel98NCOYXpkwUqZqh0ahZeeKfmisiLIcEZdsb+WbLv02g/dI5BUmZnIyOe7RzZtLax81nnb2HbvC2tzA=="; }; }; "punycode-1.4.1" = { @@ -2516,22 +2516,22 @@ let sha512 = "NAqBSrijGLZdM0WZNsInLJpkJokL72XYjUpnB0iwsRgxh7dB6COrHnTBNwN0E+lHDAJzu7kLAkDeY08z2/A0hg=="; }; }; - "request-promise-core-1.1.2" = { + "request-promise-core-1.1.3" = { name = "request-promise-core"; packageName = "request-promise-core"; - version = "1.1.2"; + version = "1.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/request-promise-core/-/request-promise-core-1.1.2.tgz"; - sha512 = "UHYyq1MO8GsefGEt7EprS8UrXsm1TxEvFUX1IMTuSLU2Rh7fTIdFtl8xD7JiEYiWU2dl+NYAjCTksTehQUxPag=="; + url = "https://registry.npmjs.org/request-promise-core/-/request-promise-core-1.1.3.tgz"; + sha512 = "QIs2+ArIGQVp5ZYbWD5ZLCY29D5CfWizP8eWnm8FoGD1TX61veauETVQbrV60662V0oFBkrDOuaBI8XgtuyYAQ=="; }; }; - "request-promise-native-1.0.7" = { + "request-promise-native-1.0.8" = { name = "request-promise-native"; packageName = "request-promise-native"; - version = "1.0.7"; + version = "1.0.8"; src = fetchurl { - url = "https://registry.npmjs.org/request-promise-native/-/request-promise-native-1.0.7.tgz"; - sha512 = "rIMnbBdgNViL37nZ1b3L/VfPOpSi0TqVDQPAvO6U14lMzOLrt5nilxCQqtDKhZeDiW0/hkCXGoQjhgJd/tCh6w=="; + url = "https://registry.npmjs.org/request-promise-native/-/request-promise-native-1.0.8.tgz"; + sha512 = "dapwLGqkHtwL5AEbfenuzjTYg35Jd6KPytsC2/TLkVMz8rm+tNt72MGUWT1RP/aYawMpN6HqbNGBQaRcBtjQMQ=="; }; }; "require-directory-2.1.1" = { @@ -2552,13 +2552,13 @@ let sha512 = "NKN5kMDylKuldxYLSUfrbo5Tuzh4hd+2E8NPPX02mZtn1VuREQToYe/ZdlJy+J3uCpfaiGF05e7B8W0iXbQHmg=="; }; }; - "resolve-1.12.0" = { + "resolve-1.13.1" = { name = "resolve"; packageName = "resolve"; - version = "1.12.0"; + version = "1.13.1"; src = fetchurl { - url = "https://registry.npmjs.org/resolve/-/resolve-1.12.0.tgz"; - sha512 = "B/dOmuoAik5bKcD6s6nXDCjzUKnaDvdkRyAk6rsmsKLipWj4797iothd7jmmUhWTfinVMU+wc56rYKsit2Qy4w=="; + url = "https://registry.npmjs.org/resolve/-/resolve-1.13.1.tgz"; + sha512 = "CxqObCX8K8YtAhOBRg+lrcdn+LK+WYOS8tSjqSFbjtrI5PnS63QPhZl4+yKfrU9tdsbMu9Anr/amegT87M9Z6w=="; }; }; "retry-0.12.0" = { @@ -2678,13 +2678,13 @@ let sha512 = "UjgapumWlbMhkBgzT7Ykc5YXUT46F0iKu8SGXq0bcwP5dz/h0Plj6enJqjz1Zbq2l5WaqYnrVbwWOWMyF3F47g=="; }; }; - "source-map-support-0.5.13" = { + "source-map-support-0.5.16" = { name = "source-map-support"; packageName = "source-map-support"; - version = "0.5.13"; + version = "0.5.16"; src = fetchurl { - url = "https://registry.npmjs.org/source-map-support/-/source-map-support-0.5.13.tgz"; - sha512 = "SHSKFHadjVA5oR4PPqhtAVdcBWwRYVd6g6cAXnIbRiIwc2EhPrTuKUBdSLvlEKyIP3GCf89fltvcZiP9MMFA1w=="; + url = "https://registry.npmjs.org/source-map-support/-/source-map-support-0.5.16.tgz"; + sha512 = "efyLRJDr68D9hBBNIPWFjhpFzURh+KJykQwvMyW5UiZzYwoF6l4YMMDIJJEyFWxWCqfyxLzz6tSfUFR+kXXsVQ=="; }; }; "spex-3.0.0" = { @@ -2903,13 +2903,13 @@ let sha512 = "XrHUvV5HpdLmIj4uVMxHggLbFSZYIn7HEWsqePZcI50pco+MPqJ50wMGY794X7AOOhxOBAjbkqfAbEe/QMp2Lw=="; }; }; - "ts-node-8.4.1" = { + "ts-node-8.5.4" = { name = "ts-node"; packageName = "ts-node"; - version = "8.4.1"; + version = "8.5.4"; src = fetchurl { - url = "https://registry.npmjs.org/ts-node/-/ts-node-8.4.1.tgz"; - sha512 = "5LpRN+mTiCs7lI5EtbXmF/HfMeCjzt7DH9CZwtkr6SywStrNQC723wG+aOWFiLNn7zT3kD/RnFqi3ZUfr4l5Qw=="; + url = "https://registry.npmjs.org/ts-node/-/ts-node-8.5.4.tgz"; + sha512 = "izbVCRV68EasEPQ8MSIGBNK9dc/4sYJJKYA+IarMQct1RtEot6Xp0bXuClsbUSnKpg50ho+aOAx8en5c+y4OFw=="; }; }; "tslib-1.10.0" = { @@ -2921,13 +2921,13 @@ let sha512 = "qOebF53frne81cf0S9B41ByenJ3/IuH8yJKngAX35CmiZySA0khhkovshKK+jGCaMnVomla7gVlIcc3EvKPbTQ=="; }; }; - "tslint-5.20.0" = { + "tslint-5.20.1" = { name = "tslint"; packageName = "tslint"; - version = "5.20.0"; + version = "5.20.1"; src = fetchurl { - url = "https://registry.npmjs.org/tslint/-/tslint-5.20.0.tgz"; - sha512 = "2vqIvkMHbnx8acMogAERQ/IuINOq6DFqgF8/VDvhEkBqQh/x6SP0Y+OHnKth9/ZcHQSroOZwUQSN18v8KKF0/g=="; + url = "https://registry.npmjs.org/tslint/-/tslint-5.20.1.tgz"; + sha512 = "EcMxhzCFt8k+/UP5r8waCf/lzmeSyVlqxqMEDQE7rWYiQky8KpIBz1JAoYXfROHrPZ1XXd43q8yQnULOLiBRQg=="; }; }; "tsutils-2.29.0" = { @@ -2975,13 +2975,13 @@ let sha512 = "TkRKr9sUTxEH8MdfuCSP7VizJyzRNMjj2J2do2Jr3Kym598JVdEksuzPQCnlFPW4ky9Q+iA+ma9BGm06XQBy8g=="; }; }; - "typescript-3.6.3" = { + "typescript-3.7.3" = { name = "typescript"; packageName = "typescript"; - version = "3.6.3"; + version = "3.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-3.6.3.tgz"; - sha512 = "N7bceJL1CtRQ2RiG0AQME13ksR7DiuQh/QehubYcghzv20tnh+MQnQIuJddTmsbqYj+dztchykemz0zFzlvdQw=="; + url = "https://registry.npmjs.org/typescript/-/typescript-3.7.3.tgz"; + sha512 = "Mcr/Qk7hXqFBXMN7p7Lusj1ktCBydylfQM/FZCk5glCNQJrCUKPkMHdo9R0MTFWsC/4kPFvDS0fDPvukfCkFsw=="; }; }; "underscore-1.4.4" = { @@ -2993,13 +2993,13 @@ let sha1 = "61a6a32010622afa07963bf325203cf12239d604"; }; }; - "unhomoglyph-1.0.2" = { + "unhomoglyph-1.0.3" = { name = "unhomoglyph"; packageName = "unhomoglyph"; - version = "1.0.2"; + version = "1.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/unhomoglyph/-/unhomoglyph-1.0.2.tgz"; - sha1 = "d69e5f5a6a1c6b211941a0889b81eba86595c253"; + url = "https://registry.npmjs.org/unhomoglyph/-/unhomoglyph-1.0.3.tgz"; + sha512 = "PC/OAHE8aiTK0Gfmy0PxOlePazRn+BeCM1r4kFtkHgEnkJZgJoI7yD2yUEjsfSdLXKU1FSt/EcIZvNoKazYUTw=="; }; }; "unpipe-1.0.0" = { @@ -3212,42 +3212,42 @@ let }; in { - "matrix-appservice-slack-git+https://github.com/matrix-org/matrix-appservice-slack.git#1.0.1" = nodeEnv.buildNodePackage { + "matrix-appservice-slack-git+https://github.com/matrix-org/matrix-appservice-slack.git#1.0.2" = nodeEnv.buildNodePackage { name = "matrix-appservice-slack"; packageName = "matrix-appservice-slack"; - version = "1.0.1"; + version = "1.0.2"; src = fetchgit { url = "https://github.com/matrix-org/matrix-appservice-slack.git"; - rev = "3e30ae24faa0d457bea7f650a22083223af8d957"; - sha256 = "40a68132606da347ffb90650ca5e0bd1e2be3025397c2f48e286fe9f5e78e847"; + rev = "8202c97c1fee0f8215f86b0fda1845ca17db3612"; + sha256 = "b419d34771f4f4be56fe66ba4cbf690fb5a337e317a927e70e65be3f1ddd55ef"; }; dependencies = [ sources."@babel/code-frame-7.5.5" sources."@babel/highlight-7.5.0" - sources."@slack/logger-1.1.0" + sources."@slack/logger-1.1.1" (sources."@slack/rtm-api-5.0.3" // { dependencies = [ sources."p-queue-2.4.2" ]; }) - sources."@slack/types-1.2.1" - (sources."@slack/web-api-5.2.1" // { + sources."@slack/types-1.3.0" + (sources."@slack/web-api-5.6.0" // { dependencies = [ sources."p-queue-2.4.2" ]; }) sources."@types/body-parser-1.17.1" sources."@types/caseless-0.12.2" - sources."@types/chai-4.2.3" + sources."@types/chai-4.2.6" sources."@types/connect-3.4.32" sources."@types/events-3.0.0" - sources."@types/express-4.17.1" - sources."@types/express-serve-static-core-4.16.9" + sources."@types/express-4.17.2" + sources."@types/express-serve-static-core-4.17.0" sources."@types/is-stream-1.1.0" sources."@types/mime-2.0.1" sources."@types/mocha-5.2.7" sources."@types/nedb-1.8.9" - sources."@types/node-12.7.11" + sources."@types/node-12.12.14" sources."@types/node-emoji-1.8.1" sources."@types/p-queue-2.3.2" sources."@types/randomstring-1.1.6" @@ -3256,8 +3256,8 @@ in sources."@types/request-promise-native-1.0.17" sources."@types/retry-0.12.0" sources."@types/serve-static-1.13.3" - sources."@types/tough-cookie-2.3.5" - sources."@types/uuid-3.4.5" + sources."@types/tough-cookie-2.3.6" + sources."@types/uuid-3.4.6" sources."@types/ws-5.1.2" sources."@types/yargs-13.0.3" sources."@types/yargs-parser-13.1.0" @@ -3269,7 +3269,7 @@ in sources."ansi-colors-3.2.3" sources."ansi-regex-4.1.0" sources."ansi-styles-3.2.1" - sources."arg-4.1.1" + sources."arg-4.1.2" sources."argparse-1.0.10" sources."array-flatten-1.1.1" sources."array-uniq-1.0.2" @@ -3281,7 +3281,7 @@ in sources."async-limiter-1.0.1" sources."asynckit-0.4.0" sources."aws-sign2-0.7.0" - sources."aws4-1.8.0" + sources."aws4-1.9.0" sources."axios-0.18.1" sources."babel-runtime-6.26.0" sources."balanced-match-1.0.0" @@ -3322,13 +3322,13 @@ in sources."colors-1.4.0" sources."colorspace-1.1.2" sources."combined-stream-1.0.8" - sources."commander-2.20.1" + sources."commander-2.20.3" sources."concat-map-0.0.1" sources."content-disposition-0.5.3" sources."content-type-1.0.4" sources."cookie-0.4.0" sources."cookie-signature-1.0.6" - sources."core-js-2.6.9" + sources."core-js-2.6.10" sources."core-util-is-1.0.2" sources."cycle-1.0.3" sources."dashdash-1.14.1" @@ -3347,8 +3347,8 @@ in sources."enabled-1.0.2" sources."encodeurl-1.0.2" sources."env-variable-0.0.5" - sources."es-abstract-1.15.0" - sources."es-to-primitive-1.2.0" + sources."es-abstract-1.16.3" + sources."es-to-primitive-1.2.1" sources."escape-html-1.0.3" sources."escape-string-regexp-2.0.0" sources."esprima-4.0.1" @@ -3393,7 +3393,7 @@ in sources."har-validator-5.1.3" sources."has-1.0.3" sources."has-flag-3.0.0" - sources."has-symbols-1.0.0" + sources."has-symbols-1.0.1" sources."he-1.2.0" sources."http-errors-1.7.2" sources."http-signature-1.2.0" @@ -3412,7 +3412,7 @@ in sources."is-property-1.0.2" sources."is-regex-1.0.4" sources."is-stream-1.1.0" - sources."is-symbol-1.0.2" + sources."is-symbol-1.0.3" sources."is-typedarray-1.0.0" sources."isarray-1.0.0" sources."isexe-2.0.0" @@ -3437,22 +3437,22 @@ in sources."ms-2.1.2" ]; }) - sources."loglevel-1.6.1" + sources."loglevel-1.6.6" sources."make-error-1.3.5" sources."manakin-0.5.2" - sources."matrix-appservice-0.3.5" - sources."matrix-appservice-bridge-1.10.3" - (sources."matrix-js-sdk-2.4.1" // { + sources."matrix-appservice-0.4.1" + sources."matrix-appservice-bridge-1.11.1" + (sources."matrix-js-sdk-2.4.5" // { dependencies = [ - sources."bluebird-3.7.0" + sources."bluebird-3.5.5" ]; }) sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.40.0" - sources."mime-types-2.1.24" + sources."mime-db-1.42.0" + sources."mime-types-2.1.25" sources."minimatch-3.0.4" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -3460,7 +3460,7 @@ in sources."minimist-0.0.8" ]; }) - (sources."mocha-6.2.1" // { + (sources."mocha-6.2.2" // { dependencies = [ sources."debug-3.2.6" sources."escape-string-regexp-1.0.5" @@ -3486,7 +3486,7 @@ in sources."nopt-3.0.6" sources."oauth-sign-0.9.0" sources."object-hash-1.3.1" - sources."object-inspect-1.6.0" + sources."object-inspect-1.7.0" sources."object-keys-1.1.1" sources."object.assign-4.1.0" sources."object.getownpropertydescriptors-2.0.3" @@ -3498,12 +3498,12 @@ in sources."p-finally-1.0.0" sources."p-limit-2.2.1" sources."p-locate-3.0.0" - (sources."p-queue-6.1.1" // { + (sources."p-queue-6.2.1" // { dependencies = [ sources."eventemitter3-4.0.0" ]; }) - sources."p-retry-4.1.0" + sources."p-retry-4.2.0" sources."p-timeout-3.2.0" sources."p-try-2.2.0" sources."packet-reader-1.0.0" @@ -3519,7 +3519,7 @@ in sources."pg-int8-1.0.1" sources."pg-minify-1.5.1" sources."pg-pool-2.0.7" - sources."pg-promise-9.3.3" + sources."pg-promise-9.3.6" sources."pg-types-2.2.0" sources."pgpass-1.0.2" sources."postgres-array-2.0.0" @@ -3529,7 +3529,7 @@ in sources."process-nextick-args-2.0.1" sources."prom-client-11.5.3" sources."proxy-addr-2.0.5" - sources."psl-1.4.0" + sources."psl-1.6.0" sources."punycode-2.1.1" sources."qs-6.7.0" sources."quick-lru-4.0.1" @@ -3544,11 +3544,11 @@ in sources."qs-6.5.2" ]; }) - sources."request-promise-core-1.1.2" - sources."request-promise-native-1.0.7" + sources."request-promise-core-1.1.3" + sources."request-promise-native-1.0.8" sources."require-directory-2.1.1" sources."require-main-filename-2.0.0" - sources."resolve-1.12.0" + sources."resolve-1.13.1" sources."retry-0.12.0" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" @@ -3568,7 +3568,7 @@ in sources."setprototypeof-1.1.1" sources."simple-swizzle-0.2.2" sources."source-map-0.6.1" - sources."source-map-support-0.5.13" + sources."source-map-support-0.5.16" sources."spex-3.0.0" sources."split-1.0.1" sources."sprintf-js-1.0.3" @@ -3597,13 +3597,13 @@ in ]; }) sources."triple-beam-1.3.0" - (sources."ts-node-8.4.1" // { + (sources."ts-node-8.5.4" // { dependencies = [ sources."diff-4.0.1" ]; }) sources."tslib-1.10.0" - (sources."tslint-5.20.0" // { + (sources."tslint-5.20.1" // { dependencies = [ sources."diff-4.0.1" sources."semver-5.7.1" @@ -3614,9 +3614,9 @@ in sources."tweetnacl-0.14.5" sources."type-detect-4.0.8" sources."type-is-1.6.18" - sources."typescript-3.6.3" + sources."typescript-3.7.3" sources."underscore-1.4.4" - sources."unhomoglyph-1.0.2" + sources."unhomoglyph-1.0.3" sources."unpipe-1.0.0" sources."uri-js-4.2.2" sources."util-deprecate-1.0.2" diff --git a/pkgs/servers/matrix-synapse/matrix-appservice-slack/package.json b/pkgs/servers/matrix-synapse/matrix-appservice-slack/package.json index 72d259f26ce..87dada8f027 100644 --- a/pkgs/servers/matrix-synapse/matrix-appservice-slack/package.json +++ b/pkgs/servers/matrix-synapse/matrix-appservice-slack/package.json @@ -1,3 +1,3 @@ [ - {"matrix-appservice-slack": "git+https://github.com/matrix-org/matrix-appservice-slack.git#1.0.1" } + {"matrix-appservice-slack": "git+https://github.com/matrix-org/matrix-appservice-slack.git#1.0.2" } ] diff --git a/pkgs/servers/meteor/default.nix b/pkgs/servers/meteor/default.nix index 6f9c22ebecf..c2f0ffa59b9 100644 --- a/pkgs/servers/meteor/default.nix +++ b/pkgs/servers/meteor/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, zlib, patchelf, runtimeShell }: let - version = "1.8.1"; + version = "1.8.2"; in stdenv.mkDerivation { @@ -9,7 +9,7 @@ stdenv.mkDerivation { pname = "meteor"; src = fetchurl { url = "https://static-meteor.netdna-ssl.com/packages-bootstrap/${version}/meteor-bootstrap-os.linux.x86_64.tar.gz"; - sha256 = "1ql58j2d1pqhzpj7c9a6zrpmxxfmlgx743q7lw7g35vz2mpq34c6"; + sha256 = "1pydmwx1yjbw54qfq7ndw2l3i3v302bvasvf71x4y9572r2p99mp"; }; #dontStrip = true; diff --git a/pkgs/servers/misc/airsonic/default.nix b/pkgs/servers/misc/airsonic/default.nix index e9ca958a95b..d8501878435 100644 --- a/pkgs/servers/misc/airsonic/default.nix +++ b/pkgs/servers/misc/airsonic/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "airsonic"; - version = "10.4.2"; + version = "10.5.0"; src = fetchurl { url = "https://github.com/airsonic/airsonic/releases/download/v${version}/airsonic.war"; - sha256 = "15dxrz1vi5h26g4z9p3x9p96hm1swajsfc2i725xbllpkhnykzcx"; + sha256 = "0nja33x3qh8zylqc7dn6x8j1wyxf7pzf9vdg9rzaq1hl6mi573jq"; }; buildCommand = '' diff --git a/pkgs/servers/monitoring/alertmanager-bot/default.nix b/pkgs/servers/monitoring/alertmanager-bot/default.nix new file mode 100644 index 00000000000..8677a8d03f2 --- /dev/null +++ b/pkgs/servers/monitoring/alertmanager-bot/default.nix @@ -0,0 +1,25 @@ +{ stdenv, buildGoPackage, fetchFromGitHub }: + +buildGoPackage rec { + pname = "alertmanager-bot"; + version = "0.4.0"; + + goPackagePath = "github.com/metalmatze/alertmanager-bot"; + + src = fetchFromGitHub { + owner = "metalmatze"; + repo = pname; + rev = version; + sha256 = "10v0fxxcs5s6zmqindr30plyw7p2yg0a64rdw1b2cj2mc1m3byx3"; + }; + + goDeps = ./deps.nix; + + meta = with stdenv.lib; { + description = "Bot for Prometheus' Alertmanager"; + homepage = "https://github.com/metalmatze/alertmanager-bot"; + license = licenses.mit; + platforms = platforms.all; + maintainers = with maintainers; [ mmahut ]; + }; +} diff --git a/pkgs/servers/monitoring/alertmanager-bot/deps.nix b/pkgs/servers/monitoring/alertmanager-bot/deps.nix new file mode 100644 index 00000000000..51e98ccbc93 --- /dev/null +++ b/pkgs/servers/monitoring/alertmanager-bot/deps.nix @@ -0,0 +1,948 @@ +# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix) +[ + { + goPackagePath = "github.com/DataDog/datadog-go"; + fetch = { + type = "git"; + url = "https://github.com/DataDog/datadog-go"; + rev = "0ddda6bee211"; + sha256 = "07ap1qhz8vwdypmlny5gxnc191c0qbm6acacs30m1d4p22x6wxip"; + }; + } + { + goPackagePath = "github.com/OneOfOne/xxhash"; + fetch = { + type = "git"; + url = "https://github.com/OneOfOne/xxhash"; + rev = "v1.2.5"; + sha256 = "15ai4nzm8cv8nqs4xm5h6ghnms19c2sp8z0zpkc46rld6y7k0xky"; + }; + } + { + goPackagePath = "github.com/alecthomas/template"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/template"; + rev = "a0175ee3bccc"; + sha256 = "0qjgvvh26vk1cyfq9fadyhfgdj36f1iapbmr5xp6zqipldz8ffxj"; + }; + } + { + goPackagePath = "github.com/alecthomas/units"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/units"; + rev = "2efee857e7cf"; + sha256 = "1j65b91qb9sbrml9cpabfrcf07wmgzzghrl7809hjjhrmbzri5bl"; + }; + } + { + goPackagePath = "github.com/armon/circbuf"; + fetch = { + type = "git"; + url = "https://github.com/armon/circbuf"; + rev = "bbbad097214e"; + sha256 = "1idpr0lzb2px2p3wgfq2276yl7jpaz43df6n91kf790404s4zmk3"; + }; + } + { + goPackagePath = "github.com/armon/go-metrics"; + fetch = { + type = "git"; + url = "https://github.com/armon/go-metrics"; + rev = "f0300d1749da"; + sha256 = "13l7c35ps0r27vxfil2w0xhhc7w5rh00awvlmn4cz0a937b9ffpv"; + }; + } + { + goPackagePath = "github.com/armon/go-radix"; + fetch = { + type = "git"; + url = "https://github.com/armon/go-radix"; + rev = "7fddfc383310"; + sha256 = "0y8chspn14n9xpsfb9gxnnf819rfpriaz64v81p7873a42kkhxb4"; + }; + } + { + goPackagePath = "github.com/beorn7/perks"; + fetch = { + type = "git"; + url = "https://github.com/beorn7/perks"; + rev = "v1.0.1"; + sha256 = "17n4yygjxa6p499dj3yaqzfww2g7528165cl13haj97hlx94dgl7"; + }; + } + { + goPackagePath = "github.com/bgentry/speakeasy"; + fetch = { + type = "git"; + url = "https://github.com/bgentry/speakeasy"; + rev = "v0.1.0"; + sha256 = "02dfrj0wyphd3db9zn2mixqxwiz1ivnyc5xc7gkz58l5l27nzp8s"; + }; + } + { + goPackagePath = "github.com/boltdb/bolt"; + fetch = { + type = "git"; + url = "https://github.com/boltdb/bolt"; + rev = "v1.3.1"; + sha256 = "0z7j06lijfi4y30ggf2znak2zf2srv2m6c68ar712wd2ys44qb3r"; + }; + } + { + goPackagePath = "github.com/cenkalti/backoff"; + fetch = { + type = "git"; + url = "https://github.com/cenkalti/backoff"; + rev = "v2.1.1"; + sha256 = "1mf4lsl3rbb8kk42x0mrhzzy4ikqy0jf6nxpzhkr02rdgwh6rjk8"; + }; + } + { + goPackagePath = "github.com/cespare/xxhash"; + fetch = { + type = "git"; + url = "https://github.com/cespare/xxhash"; + rev = "v1.0.0"; + sha256 = "02aii7z46sasagw816zz3v0gzax1z5d1hkjslz7ng25386p0gzk1"; + }; + } + { + goPackagePath = "github.com/circonus-labs/circonus-gometrics"; + fetch = { + type = "git"; + url = "https://github.com/circonus-labs/circonus-gometrics"; + rev = "v2.0.0"; + sha256 = "0d6cnswq28mjak7092vf89f9l0ga2ziwyamq9kdgfc7aavpwr6l9"; + }; + } + { + goPackagePath = "github.com/circonus-labs/circonusllhist"; + fetch = { + type = "git"; + url = "https://github.com/circonus-labs/circonusllhist"; + rev = "6e85b9352cf0"; + sha256 = "182gry1clk12m34574qif7bx74qpxib2zv0mr5kv2j9hfq7f9m01"; + }; + } + { + goPackagePath = "github.com/creack/pty"; + fetch = { + type = "git"; + url = "https://github.com/creack/pty"; + rev = "v1.1.7"; + sha256 = "1plwwlk1i9b80zv8zdplvv81shfyc9gf0flydnydsh5sr3ib5vrc"; + }; + } + { + goPackagePath = "github.com/davecgh/go-spew"; + fetch = { + type = "git"; + url = "https://github.com/davecgh/go-spew"; + rev = "v1.1.1"; + sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y"; + }; + } + { + goPackagePath = "github.com/docker/libkv"; + fetch = { + type = "git"; + url = "https://github.com/docker/libkv"; + rev = "v0.2.1"; + sha256 = "0blq7kxjy1bvm3j5q4i6csnc4i88c1wvj4gjvxbqfk3sny73gjkr"; + }; + } + { + goPackagePath = "github.com/fatih/color"; + fetch = { + type = "git"; + url = "https://github.com/fatih/color"; + rev = "v1.7.0"; + sha256 = "0v8msvg38r8d1iiq2i5r4xyfx0invhc941kjrsg5gzwvagv55inv"; + }; + } + { + goPackagePath = "github.com/fsnotify/fsnotify"; + fetch = { + type = "git"; + url = "https://github.com/fsnotify/fsnotify"; + rev = "v1.4.7"; + sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g"; 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+ fetch = { + type = "git"; + url = "https://github.com/golang/appengine"; + rev = "v1.1.0"; + sha256 = "1pz202zszg8f35dk5pfhwgcdi3r6dx1l4yk6x6ly7nb4j45zi96x"; + }; + } + { + goPackagePath = "gopkg.in/airbrake/gobrake.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/airbrake/gobrake.v2"; + rev = "v2.0.9"; + sha256 = "1x06f7n7qlyzqgyz0sdfcidf3w4ldn6zs6qx2mhibggk2z4whcjw"; + }; + } + { + goPackagePath = "gopkg.in/alecthomas/kingpin.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/alecthomas/kingpin.v2"; + rev = "v2.2.6"; + sha256 = "0mndnv3hdngr3bxp7yxfd47cas4prv98sqw534mx7vp38gd88n5r"; + }; + } + { + goPackagePath = "gopkg.in/check.v1"; + fetch = { + type = "git"; + url = "https://gopkg.in/check.v1"; + rev = "788fd7840127"; + sha256 = "0v3bim0j375z81zrpr5qv42knqs0y2qv2vkjiqi5axvb78slki1a"; + }; + } + { + goPackagePath = "gopkg.in/fsnotify.v1"; + fetch = { + type = "git"; + url = "https://gopkg.in/fsnotify.v1"; + rev = "v1.4.7"; + sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g"; + }; + } + { + goPackagePath = "gopkg.in/gemnasium/logrus-airbrake-hook.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/gemnasium/logrus-airbrake-hook.v2"; + rev = "v2.1.2"; + sha256 = "0sbg0dn6cysmf8f2bi209jwl4jnpiwp4rdghnxlzirw3c32ms5y5"; + }; + } + { + goPackagePath = "gopkg.in/tomb.v1"; + fetch = { + type = "git"; + url = "https://gopkg.in/tomb.v1"; + rev = "dd632973f1e7"; + sha256 = "1lqmq1ag7s4b3gc3ddvr792c5xb5k6sfn0cchr3i2s7f1c231zjv"; + }; + } + { + goPackagePath = "gopkg.in/vmihailenco/msgpack.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/vmihailenco/msgpack.v2"; + rev = "v2.9.1"; + sha256 = "0ah9j7i97ifyqhiscq8d43gcrhksb3bx83s2p1nyfi1bxw78jwfi"; + }; + } + { + goPackagePath = "gopkg.in/yaml.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/yaml.v2"; + rev = "v2.2.2"; + sha256 = "01wj12jzsdqlnidpyjssmj0r4yavlqy7dwrg7adqd8dicjc4ncsa"; + }; + } +] diff --git a/pkgs/servers/monitoring/grafana/default.nix b/pkgs/servers/monitoring/grafana/default.nix index 7e2aaa66257..787c7b1d463 100644 --- a/pkgs/servers/monitoring/grafana/default.nix +++ b/pkgs/servers/monitoring/grafana/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "grafana"; - version = "6.5.1"; + version = "6.5.2"; goPackagePath = "github.com/grafana/grafana"; @@ -12,12 +12,12 @@ buildGoPackage rec { rev = "v${version}"; owner = "grafana"; repo = "grafana"; - sha256 = "1hcfn9dgx8vabadagm69dgk5sdyc1kxkbma2ryfdb0v6vpm01784"; + sha256 = "1hplnb8rv2sxai05qf6il5kza08bkhcawvymr2h9lfdsj7p4kbzy"; }; srcStatic = fetchurl { url = "https://dl.grafana.com/oss/release/grafana-${version}.linux-amd64.tar.gz"; - sha256 = "1m2rxxgs8sf8qrg0bk3i2gy17q6n4nk4cwlp9bbffwmwcmf78gnw"; + sha256 = "1fnj41lp9b53iyjgis5x8k3g5vl73fdrxsdxnf10d4ma95cwb2qa"; }; postPatch = '' diff --git a/pkgs/servers/monitoring/loki/default.nix b/pkgs/servers/monitoring/loki/default.nix index 9bc4223b5d6..895621d4cba 100644 --- a/pkgs/servers/monitoring/loki/default.nix +++ b/pkgs/servers/monitoring/loki/default.nix @@ -1,7 +1,7 @@ { stdenv, buildGoPackage, fetchFromGitHub, makeWrapper, systemd }: buildGoPackage rec { - version = "1.0.0"; + version = "1.2.0"; pname = "grafana-loki"; goPackagePath = "github.com/grafana/loki"; @@ -11,13 +11,13 @@ buildGoPackage rec { rev = "v${version}"; owner = "grafana"; repo = "loki"; - sha256 = "0qqmxrbiph268i5c8i6wpcihspdcglfxd4hy6ag03bl66rciq8nb"; + sha256 = "04ix58gb9yy5jf8fhn3k1pbwqs69k7m96cck38ymhwml1793b4k9"; }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ systemd.dev ]; + buildInputs = stdenv.lib.optionals stdenv.isLinux [ systemd.dev ]; - preFixup = '' + preFixup = stdenv.lib.optionalString stdenv.isLinux '' wrapProgram $bin/bin/promtail \ --prefix LD_LIBRARY_PATH : "${systemd.lib}/lib" ''; @@ -25,8 +25,8 @@ buildGoPackage rec { meta = with stdenv.lib; { description = "Like Prometheus, but for logs"; license = licenses.asl20; - homepage = "https://grafana.com/loki"; + homepage = "https://grafana.com/oss/loki/"; maintainers = with maintainers; [ willibutz globin mmahut ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/servers/monitoring/prometheus/default.nix b/pkgs/servers/monitoring/prometheus/default.nix index 9559c9b5c37..d772d9935bc 100644 --- a/pkgs/servers/monitoring/prometheus/default.nix +++ b/pkgs/servers/monitoring/prometheus/default.nix @@ -1,11 +1,8 @@ -{ lib, go, buildGoPackage, fetchFromGitHub }: +{ lib, go, buildGoPackage, fetchFromGitHub, mkYarnPackage }: -buildGoPackage rec { - pname = "prometheus"; +let version = "2.14.0"; - goPackagePath = "github.com/prometheus/prometheus"; - src = fetchFromGitHub { rev = "v${version}"; owner = "prometheus"; @@ -13,16 +10,47 @@ buildGoPackage rec { sha256 = "0zmxj78h3cnqbhsqab940hyzpim5i9r81b15a57f3dnrrd10p287"; }; + webui = mkYarnPackage { + src = "${src}/web/ui/react-app"; + packageJSON = ./webui-package.json; + yarnNix = ./webui-yarndeps.nix; + + # The standard yarn2nix directory management causes build failures with + # Prometheus's webui due to using relative imports into node_modules. Use + # an extremely simplified version of it instead. + configurePhase = "ln -s $node_modules node_modules"; + buildPhase = "PUBLIC_URL=. yarn build"; + installPhase = "mv build $out"; + distPhase = "true"; + }; +in buildGoPackage rec { + pname = "prometheus"; + inherit src version; + + goPackagePath = "github.com/prometheus/prometheus"; + + postPatch = '' + ln -s ${webui.node_modules} web/ui/react-app/node_modules + ln -s ${webui} web/ui/static/react + ''; + buildFlagsArray = let t = "${goPackagePath}/vendor/github.com/prometheus/common/version"; - in '' - -ldflags= - -X ${t}.Version=${version} - -X ${t}.Revision=unknown - -X ${t}.Branch=unknown - -X ${t}.BuildUser=nix@nixpkgs - -X ${t}.BuildDate=unknown - -X ${t}.GoVersion=${lib.getVersion go} + in [ + "-tags=builtinassets" + '' + -ldflags= + -X ${t}.Version=${version} + -X ${t}.Revision=unknown + -X ${t}.Branch=unknown + -X ${t}.BuildUser=nix@nixpkgs + -X ${t}.BuildDate=unknown + -X ${t}.GoVersion=${lib.getVersion go} + '' + ]; + + preBuild = '' + make -C go/src/${goPackagePath} assets ''; preInstall = '' diff --git a/pkgs/servers/monitoring/prometheus/nginx-exporter.nix b/pkgs/servers/monitoring/prometheus/nginx-exporter.nix index cc527c29ac2..ce3ed9ab9d6 100644 --- a/pkgs/servers/monitoring/prometheus/nginx-exporter.nix +++ b/pkgs/servers/monitoring/prometheus/nginx-exporter.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "nginx_exporter"; - version = "0.4.2"; + version = "0.5.0"; goPackagePath = "github.com/nginxinc/nginx-prometheus-exporter"; @@ -14,7 +14,7 @@ buildGoPackage rec { rev = "v${version}"; owner = "nginxinc"; repo = "nginx-prometheus-exporter"; - sha256 = "023nl83w0fic7sj0yxxgj7jchyafqnmv6dq35amzz37ikx92mdcj"; + sha256 = "1fyn2bjq80dx4jv1rakrm0vg6i657a5rs7kkg0f9mbv1alir8kkx"; }; doCheck = true; diff --git a/pkgs/servers/monitoring/prometheus/update-webui-deps.sh b/pkgs/servers/monitoring/prometheus/update-webui-deps.sh new file mode 100755 index 00000000000..812f6d5d9cf --- /dev/null +++ b/pkgs/servers/monitoring/prometheus/update-webui-deps.sh @@ -0,0 +1,20 @@ +#!/usr/bin/env nix-shell +#!nix-shell -I nixpkgs=../../../.. -i bash -p wget yarn2nix-moretea.yarn2nix + +# This script is based upon: +# pkgs/applications/networking/instant-messengers/riot/update-riot-desktop.sh + +set -euo pipefail + +if [ "$#" -ne 1 ] || [[ "$1" == -* ]]; then + echo "Regenerates the Yarn dependency lock files for the prometheus package." + echo "Usage: $0 <git release tag>" + exit 1 +fi + +PROM_WEB_SRC="https://raw.githubusercontent.com/prometheus/prometheus/$1" + +wget "$PROM_WEB_SRC/web/ui/react-app/package.json" -O webui-package.json +wget "$PROM_WEB_SRC/web/ui/react-app/yarn.lock" -O yarn.lock +yarn2nix --lockfile=yarn.lock > webui-yarndeps.nix +rm yarn.lock diff --git a/pkgs/servers/monitoring/prometheus/webui-package.json b/pkgs/servers/monitoring/prometheus/webui-package.json new file mode 100644 index 00000000000..1a96845d15e --- /dev/null +++ b/pkgs/servers/monitoring/prometheus/webui-package.json @@ -0,0 +1,96 @@ +{ + "name": "graph", + "version": "0.1.0", + "private": true, + "dependencies": { + "@fortawesome/fontawesome-svg-core": "^1.2.14", + "@fortawesome/free-solid-svg-icons": "^5.7.1", + "@fortawesome/react-fontawesome": "^0.1.4", + "@reach/router": "^1.2.1", + "@testing-library/react-hooks": "^3.1.1", + "@types/jest": "^24.0.20", + "@types/jquery": "^3.3.29", + "@types/node": "^12.11.1", + "@types/reach__router": "^1.2.6", + "@types/react": "^16.8.2", + "@types/react-copy-to-clipboard": "^4.3.0", + "@types/react-dom": "^16.8.0", + "@types/react-resize-detector": "^4.0.2", + "@types/sanitize-html": "^1.20.2", + "bootstrap": "^4.2.1", + "downshift": "^3.2.2", + "enzyme-to-json": "^3.4.3", + "flot": "^3.2.13", + "fuzzy": "^0.1.3", + "i": "^0.3.6", + "jest-fetch-mock": "^2.1.2", + "jquery": "^3.3.1", + "jquery.flot.tooltip": "^0.9.0", + "jsdom": "^15.2.0", + "moment": "^2.24.0", + "moment-timezone": "^0.5.23", + "popper.js": "^1.14.3", + "react": "^16.7.0", + "react-copy-to-clipboard": "^5.0.1", + "react-dom": "^16.7.0", + "react-resize-detector": "^4.2.1", + "react-scripts": "^3.2.0", + "react-test-renderer": "^16.9.0", + "reactstrap": "^8.0.1", + "sanitize-html": "^1.20.1", + "tempusdominus-bootstrap-4": "^5.1.2", + "tempusdominus-core": "^5.0.3", + "typescript": "^3.3.3" + }, + "scripts": { + "start": "react-scripts start", + "build": "react-scripts build", + "test": "react-scripts test", + "test:debug": "react-scripts --inspect-brk test --runInBand --no-cache", + "eject": "react-scripts eject", + "lint:ci": "eslint --quiet \"src/**/*.{ts,tsx}\"", + "lint": "eslint --fix \"src/**/*.{ts,tsx}\"" + }, + "prettier": { + "singleQuote": true, + "trailingComma": "es5", + "printWidth": 125 + }, + "browserslist": [ + ">0.2%", + "not dead", + "not ie <= 11", + "not op_mini all" + ], + "devDependencies": { + "@types/enzyme": "^3.10.3", + "@types/enzyme-adapter-react-16": "^1.0.5", + "@types/flot": "0.0.31", + "@types/moment-timezone": "^0.5.10", + "@types/reactstrap": "^8.0.5", + "@types/sinon": "^7.5.0", + "@typescript-eslint/eslint-plugin": "2.x", + "@typescript-eslint/parser": "2.x", + "babel-eslint": "10.x", + "enzyme": "^3.10.0", + "enzyme-adapter-react-16": "^1.15.1", + "eslint": "6.x", + "eslint-config-prettier": "^6.4.0", + "eslint-config-react-app": "^5.0.2", + "eslint-plugin-flowtype": "3.x", + "eslint-plugin-import": "2.x", + "eslint-plugin-jsx-a11y": "6.x", + "eslint-plugin-prettier": "^3.1.1", + "eslint-plugin-react": "7.x", + "eslint-plugin-react-hooks": "1.x", + "jest-fetch-mock": "^2.1.2", + "prettier": "^1.18.2", + "sinon": "^7.5.0" + }, + "proxy": "http://localhost:9090", + "jest": { + "snapshotSerializers": [ + "enzyme-to-json/serializer" + ] + } +} diff --git a/pkgs/servers/monitoring/prometheus/webui-yarndeps.nix b/pkgs/servers/monitoring/prometheus/webui-yarndeps.nix new file mode 100644 index 00000000000..3cc45a2f691 --- /dev/null +++ b/pkgs/servers/monitoring/prometheus/webui-yarndeps.nix @@ -0,0 +1,11885 @@ +{ fetchurl, fetchgit, linkFarm, runCommandNoCC, gnutar }: rec { + offline_cache = linkFarm "offline" packages; + packages = [ + { + name = "_babel_code_frame___code_frame_7.5.5.tgz"; + path = fetchurl { + name = "_babel_code_frame___code_frame_7.5.5.tgz"; + url = "https://registry.yarnpkg.com/@babel/code-frame/-/code-frame-7.5.5.tgz"; + sha1 = "bc0782f6d69f7b7d49531219699b988f669a8f9d"; + }; + } + { + name = "_babel_core___core_7.6.0.tgz"; + path = fetchurl { + name = "_babel_core___core_7.6.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/core/-/core-7.6.0.tgz"; + sha1 = "9b00f73554edd67bebc86df8303ef678be3d7b48"; + }; + } + { + name = "_babel_core___core_7.6.4.tgz"; + path = fetchurl { + name = "_babel_core___core_7.6.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/core/-/core-7.6.4.tgz"; + sha1 = "6ebd9fe00925f6c3e177bb726a188b5f578088ff"; + }; + } + { + name = "_babel_generator___generator_7.6.4.tgz"; + path = fetchurl { + name = "_babel_generator___generator_7.6.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.6.4.tgz"; + sha1 = "a4f8437287bf9671b07f483b76e3bb731bc97671"; + }; + } + { + name = "_babel_helper_annotate_as_pure___helper_annotate_as_pure_7.0.0.tgz"; + path = fetchurl { + name = "_babel_helper_annotate_as_pure___helper_annotate_as_pure_7.0.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-annotate-as-pure/-/helper-annotate-as-pure-7.0.0.tgz"; + sha1 = "323d39dd0b50e10c7c06ca7d7638e6864d8c5c32"; + }; + } + { + name = "_babel_helper_builder_binary_assignment_operator_visitor___helper_builder_binary_assignment_operator_visitor_7.1.0.tgz"; + path = fetchurl { + name = "_babel_helper_builder_binary_assignment_operator_visitor___helper_builder_binary_assignment_operator_visitor_7.1.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-builder-binary-assignment-operator-visitor/-/helper-builder-binary-assignment-operator-visitor-7.1.0.tgz"; + sha1 = "6b69628dfe4087798e0c4ed98e3d4a6b2fbd2f5f"; + }; + } + { + name = "_babel_helper_builder_react_jsx___helper_builder_react_jsx_7.3.0.tgz"; + path = fetchurl { + name = "_babel_helper_builder_react_jsx___helper_builder_react_jsx_7.3.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-builder-react-jsx/-/helper-builder-react-jsx-7.3.0.tgz"; + sha1 = "a1ac95a5d2b3e88ae5e54846bf462eeb81b318a4"; + }; + } + { + name = "_babel_helper_call_delegate___helper_call_delegate_7.4.4.tgz"; + path = fetchurl { + name = "_babel_helper_call_delegate___helper_call_delegate_7.4.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-call-delegate/-/helper-call-delegate-7.4.4.tgz"; + sha1 = "87c1f8ca19ad552a736a7a27b1c1fcf8b1ff1f43"; + }; + } + { + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.6.0.tgz"; + path = fetchurl { + name = "_babel_helper_create_class_features_plugin___helper_create_class_features_plugin_7.6.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.6.0.tgz"; + sha1 = "769711acca889be371e9bc2eb68641d55218021f"; + }; + } + { + name = "_babel_helper_define_map___helper_define_map_7.5.5.tgz"; + path = fetchurl { + name = "_babel_helper_define_map___helper_define_map_7.5.5.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-define-map/-/helper-define-map-7.5.5.tgz"; + sha1 = "3dec32c2046f37e09b28c93eb0b103fd2a25d369"; + }; + } + { + name = "_babel_helper_explode_assignable_expression___helper_explode_assignable_expression_7.1.0.tgz"; + path = fetchurl { + name = "_babel_helper_explode_assignable_expression___helper_explode_assignable_expression_7.1.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-explode-assignable-expression/-/helper-explode-assignable-expression-7.1.0.tgz"; + sha1 = "537fa13f6f1674df745b0c00ec8fe4e99681c8f6"; + }; + } + { + name = "_babel_helper_function_name___helper_function_name_7.1.0.tgz"; + path = fetchurl { + name = "_babel_helper_function_name___helper_function_name_7.1.0.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-function-name/-/helper-function-name-7.1.0.tgz"; + sha1 = "a0ceb01685f73355d4360c1247f582bfafc8ff53"; + }; + } + { + name = "_babel_helper_get_function_arity___helper_get_function_arity_7.0.0.tgz"; 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+ url = "https://registry.yarnpkg.com/write-file-atomic/-/write-file-atomic-2.4.1.tgz"; + sha1 = "d0b05463c188ae804396fd5ab2a370062af87529"; + }; + } + { + name = "write___write_1.0.3.tgz"; + path = fetchurl { + name = "write___write_1.0.3.tgz"; + url = "https://registry.yarnpkg.com/write/-/write-1.0.3.tgz"; + sha1 = "0800e14523b923a387e415123c865616aae0f5c3"; + }; + } + { + name = "ws___ws_5.2.2.tgz"; + path = fetchurl { + name = "ws___ws_5.2.2.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-5.2.2.tgz"; + sha1 = "dffef14866b8e8dc9133582514d1befaf96e980f"; + }; + } + { + name = "ws___ws_6.2.1.tgz"; + path = fetchurl { + name = "ws___ws_6.2.1.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-6.2.1.tgz"; + sha1 = "442fdf0a47ed64f59b6a5d8ff130f4748ed524fb"; + }; + } + { + name = "ws___ws_7.1.2.tgz"; + path = fetchurl { + name = "ws___ws_7.1.2.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-7.1.2.tgz"; + sha1 = "c672d1629de8bb27a9699eb599be47aeeedd8f73"; + }; + } + { + name = "xml_name_validator___xml_name_validator_3.0.0.tgz"; + path = fetchurl { + name = "xml_name_validator___xml_name_validator_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/xml-name-validator/-/xml-name-validator-3.0.0.tgz"; + sha1 = "6ae73e06de4d8c6e47f9fb181f78d648ad457c6a"; + }; + } + { + name = "xmlchars___xmlchars_2.2.0.tgz"; + path = fetchurl { + name = "xmlchars___xmlchars_2.2.0.tgz"; + url = "https://registry.yarnpkg.com/xmlchars/-/xmlchars-2.2.0.tgz"; + sha1 = "060fe1bcb7f9c76fe2a17db86a9bc3ab894210cb"; + }; + } + { + name = "xregexp___xregexp_4.0.0.tgz"; + path = fetchurl { + name = "xregexp___xregexp_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/xregexp/-/xregexp-4.0.0.tgz"; + sha1 = "e698189de49dd2a18cc5687b05e17c8e43943020"; + }; + } + { + name = "xtend___xtend_4.0.2.tgz"; + path = fetchurl { + name = "xtend___xtend_4.0.2.tgz"; + url = "https://registry.yarnpkg.com/xtend/-/xtend-4.0.2.tgz"; + sha1 = "bb72779f5fa465186b1f438f674fa347fdb5db54"; + }; + } + { + name = "y18n___y18n_4.0.0.tgz"; + path = fetchurl { + name = "y18n___y18n_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/y18n/-/y18n-4.0.0.tgz"; + sha1 = "95ef94f85ecc81d007c264e190a120f0a3c8566b"; + }; + } + { + name = "yallist___yallist_3.1.1.tgz"; + path = fetchurl { + name = "yallist___yallist_3.1.1.tgz"; + url = "https://registry.yarnpkg.com/yallist/-/yallist-3.1.1.tgz"; + sha1 = "dbb7daf9bfd8bac9ab45ebf602b8cbad0d5d08fd"; + }; + } + { + name = "yargs_parser___yargs_parser_10.1.0.tgz"; + path = fetchurl { + name = "yargs_parser___yargs_parser_10.1.0.tgz"; + url = "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-10.1.0.tgz"; + sha1 = "7202265b89f7e9e9f2e5765e0fe735a905edbaa8"; + }; + } + { + name = "yargs_parser___yargs_parser_13.1.1.tgz"; + path = fetchurl { + name = "yargs_parser___yargs_parser_13.1.1.tgz"; + url = "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-13.1.1.tgz"; + sha1 = "d26058532aa06d365fe091f6a1fc06b2f7e5eca0"; + }; + } + { + name = "yargs___yargs_12.0.2.tgz"; + path = fetchurl { + name = "yargs___yargs_12.0.2.tgz"; + url = "https://registry.yarnpkg.com/yargs/-/yargs-12.0.2.tgz"; + sha1 = "fe58234369392af33ecbef53819171eff0f5aadc"; + }; + } + { + name = "yargs___yargs_13.3.0.tgz"; + path = fetchurl { + name = "yargs___yargs_13.3.0.tgz"; + url = "https://registry.yarnpkg.com/yargs/-/yargs-13.3.0.tgz"; + sha1 = "4c657a55e07e5f2cf947f8a366567c04a0dedc83"; + }; + } + ]; +} diff --git a/pkgs/servers/monitoring/riemann/default.nix b/pkgs/servers/monitoring/riemann/default.nix index 83b7433b14a..295a7592880 100644 --- a/pkgs/servers/monitoring/riemann/default.nix +++ b/pkgs/servers/monitoring/riemann/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "riemann"; - version = "0.3.4"; + version = "0.3.5"; src = fetchurl { url = "https://github.com/riemann/riemann/releases/download/${version}/${pname}-${version}.tar.bz2"; - sha256 = "1c31higrsmpkvl956rrw1hpwjyvypgrjzl6vky0gn55zgvisasn4"; + sha256 = "1d7v2lg1b7z6v0qckq70nzqpqcs90v29laizsf8ghyj113ips3rc"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/servers/mpd/clientlib.nix b/pkgs/servers/mpd/clientlib.nix index 76b00b4cb29..c6b36fed8eb 100644 --- a/pkgs/servers/mpd/clientlib.nix +++ b/pkgs/servers/mpd/clientlib.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, meson, ninja, fixDarwinDylibNames }: stdenv.mkDerivation rec { - version = "2.16"; + version = "2.17"; pname = "libmpdclient"; src = fetchFromGitHub { owner = "MusicPlayerDaemon"; repo = "libmpdclient"; rev = "v${version}"; - sha256 = "0kd76pcf8pvmzl4k3cbq68c16imwaak2zljsa1wwwgk6idyw6gb1"; + sha256 = "0458zq12ph1pbm9mcbdj8mm31iq3yzzc1aq9fhfwz341zwpwcp21"; }; nativeBuildInputs = [ meson ninja ] diff --git a/pkgs/servers/mpd/default.nix b/pkgs/servers/mpd/default.nix index 2364043c868..d2578b185fc 100644 --- a/pkgs/servers/mpd/default.nix +++ b/pkgs/servers/mpd/default.nix @@ -82,7 +82,7 @@ let # Disable platform specific features if needed # using libmad to decode mp3 files on darwin is causing a segfault -- there # is probably a solution, but I'm disabling it for now - platformMask = lib.optionals stdenv.isDarwin [ "mad" "pulse" "jack" "nfs" "smb" ] + platformMask = lib.optionals stdenv.isDarwin [ "mad" "pulse" "jack" "nfs" "smbclient" ] ++ lib.optionals (!stdenv.isLinux) [ "alsa" "systemd" "syslog" ]; knownFeatures = builtins.attrNames featureDependencies; @@ -113,7 +113,7 @@ let buildInputs = [ glib boost ] ++ (lib.concatLists (lib.attrVals features_ featureDependencies)) - ++ lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.AudioToolbox; + ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AudioToolbox darwin.apple_sdk.frameworks.AudioUnit ]; nativeBuildInputs = [ meson ninja pkgconfig ]; diff --git a/pkgs/servers/nosql/neo4j/default.nix b/pkgs/servers/nosql/neo4j/default.nix index 69decb2f28d..2e06ff5d95e 100644 --- a/pkgs/servers/nosql/neo4j/default.nix +++ b/pkgs/servers/nosql/neo4j/default.nix @@ -4,11 +4,11 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "neo4j"; - version = "3.5.12"; + version = "3.5.13"; src = fetchurl { url = "https://neo4j.com/artifact.php?name=neo4j-community-${version}-unix.tar.gz"; - sha256 = "0v6qs3szxdqi1s8r9bfh5xpfs4hby7wlm3zicj5n46qx44mbg0iv"; + sha256 = "0l320314pqy1mbcrkf7xkifwz86s5xa5saq81yqr8a67df0jknrg"; }; buildInputs = [ makeWrapper jre8 which gawk ]; diff --git a/pkgs/servers/openafs/1.8/cross-build.patch b/pkgs/servers/openafs/1.8/cross-build.patch index 2b4fd58b23a..62254164a1b 100644 --- a/pkgs/servers/openafs/1.8/cross-build.patch +++ b/pkgs/servers/openafs/1.8/cross-build.patch @@ -2,9 +2,9 @@ diff -Nur --unidirectional-new-file openafs-1.8.2/configure.ac openafs-1.8.2.new --- openafs-1.8.2/configure.ac 2018-09-11 17:52:48.000000000 +0200 +++ openafs-1.8.2.new/configure.ac 2018-10-16 15:56:36.512277860 +0200 @@ -23,6 +23,7 @@ + AFS_LT_INIT AC_PROG_CC - AC_PROG_LIBTOOL +AX_PROG_CC_FOR_BUILD AC_PATH_PROGS([PATH_CPP], [cpp], [${CC-cc} -E], [$PATH:/lib:/usr/ccs/lib]) diff --git a/pkgs/servers/openafs/1.8/default.nix b/pkgs/servers/openafs/1.8/default.nix index 541962c542c..5fe4cad021f 100644 --- a/pkgs/servers/openafs/1.8/default.nix +++ b/pkgs/servers/openafs/1.8/default.nix @@ -28,9 +28,6 @@ stdenv.mkDerivation { # Makefiles don't include install targets for all new shared libs, yet. dontDisableStatic = true; - # Fixes broken format string in 1.8.2 - hardeningDisable=[ "format" ]; - preConfigure = '' patchShebangs . for i in `grep -l -R '/usr/\(include\|src\)' .`; do diff --git a/pkgs/servers/openafs/1.8/module.nix b/pkgs/servers/openafs/1.8/module.nix index 9ae66175acf..dab97f10bee 100644 --- a/pkgs/servers/openafs/1.8/module.nix +++ b/pkgs/servers/openafs/1.8/module.nix @@ -11,20 +11,6 @@ in stdenv.mkDerivation { name = "openafs-${version}-${kernel.modDirVersion}"; inherit version src; - patches = [ - # Linux 5.3 - (fetchpatch { - name = "openafs_1_8-recurse-keyring_search.patch"; - url = "http://git.openafs.org/?p=openafs.git;a=patch;h=02d82275c17284d04629282aa374bb39f511c989"; - sha256 = "03pkldwf6i67yf6i1705qp18rx5b0b342ryda8vfjw9lnvpinygs"; - }) - (fetchpatch { - name = "openafs_1_8-send-sig.patch"; - url = "http://git.openafs.org/?p=openafs.git;a=patch;h=2b7af1243f46496c0b5973b3fa2a6396243f7613"; - sha256 = "13gyh5ncpp15dl7056gdzl5xhp2bmafc557bd2a4bwx9nyj53bag"; - }) - ]; - nativeBuildInputs = [ autoconf automake flex libtool_2 perl which yacc ] ++ kernel.moduleBuildDependencies; diff --git a/pkgs/servers/openafs/1.8/srcs.nix b/pkgs/servers/openafs/1.8/srcs.nix index d1b23d8bcae..4a5591ef464 100644 --- a/pkgs/servers/openafs/1.8/srcs.nix +++ b/pkgs/servers/openafs/1.8/srcs.nix @@ -1,14 +1,14 @@ { fetchurl }: rec { - version = "1.8.3"; + version = "1.8.5"; src = fetchurl { url = "http://www.openafs.org/dl/openafs/${version}/openafs-${version}-src.tar.bz2"; - sha256 = "19ffchxwgqg4wl98l456jdpgq2w8b5izn8hxdsq9hjs0a1nc3nga"; + sha256 = "08w5n803xm75j7daa3mr2ncfmcg0wpm7yasj6zyddqlb4f7xdppf"; }; srcs = [ src (fetchurl { url = "http://www.openafs.org/dl/openafs/${version}/openafs-${version}-doc.tar.bz2"; - sha256 = "14smdhn1f6f3cbvvwxgjjld0m4b17vqh3rzkxf5apmjsdda21njq"; + sha256 = "08mg3n0q2igfas1khj18r9apyrkpbp1jick0ix5nfaal90jbifis"; })]; } diff --git a/pkgs/servers/samba/4.x.nix b/pkgs/servers/samba/4.x.nix index f92c5aaa210..c7ee15bc9f8 100644 --- a/pkgs/servers/samba/4.x.nix +++ b/pkgs/servers/samba/4.x.nix @@ -20,11 +20,11 @@ with lib; stdenv.mkDerivation rec { pname = "samba"; - version = "4.10.10"; + version = "4.10.11"; src = fetchurl { url = "mirror://samba/pub/samba/stable/${pname}-${version}.tar.gz"; - sha256 = "19b653rr2i9snvapik58phbqj38cxjdlyx6nl3m2y3k1a55p633h"; + sha256 = "157qvz8x2s7994rzxhcmpc79cfk86zc0rq5qwg8alvjcw0r457v0"; }; outputs = [ "out" "dev" "man" ]; diff --git a/pkgs/servers/search/groonga/default.nix b/pkgs/servers/search/groonga/default.nix index 7fb7a774e8d..cfadeac5f07 100644 --- a/pkgs/servers/search/groonga/default.nix +++ b/pkgs/servers/search/groonga/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { pname = "groonga"; - version = "9.0.9"; + version = "9.1.0"; src = fetchurl { url = "https://packages.groonga.org/source/groonga/${pname}-${version}.tar.gz"; - sha256 = "0axf07cg8j5lahkl41li9f7i3c6318cmlb40865iscmkjl17yxh9"; + sha256 = "11mlpnaldb6z438qdb7qjq9dxbh71l6v6lrv69fxka34izpgyhkk"; }; buildInputs = with stdenv.lib; diff --git a/pkgs/servers/search/solr/8.x.nix b/pkgs/servers/search/solr/8.x.nix index 7abfe9a2b20..6a5dfb98aa7 100644 --- a/pkgs/servers/search/solr/8.x.nix +++ b/pkgs/servers/search/solr/8.x.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "solr"; - version = "8.3.0"; + version = "8.3.1"; src = fetchurl { url = "mirror://apache/lucene/${pname}/${version}/${pname}-${version}.tgz"; - sha256 = "11qkipmj8qq4gw5lwnx1j8dr2lq8d5h1v1fbdyppw8l6a68j160s"; + sha256 = "0n80690vdsd0gf5gg77kg8pyf3nw0iv33zag9r7al88j5riy42ih"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/servers/sql/dolt/default.nix b/pkgs/servers/sql/dolt/default.nix new file mode 100644 index 00000000000..b9876fbc5ea --- /dev/null +++ b/pkgs/servers/sql/dolt/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchFromGitHub, lib, buildGoModule }: + +buildGoModule rec { + pname = "dolt"; + version = "0.12.0"; + + src = fetchFromGitHub { + owner = "liquidata-inc"; + repo = "dolt"; + rev = "v${version}"; + sha256 = "1sy8ia9j5aymjpf3k86fc8yw6384iy9ryd8cl72fr9cp70l7sx1q"; + }; + + modRoot = "./go"; + subPackages = [ "cmd/dolt" "cmd/git-dolt" "cmd/git-dolt-smudge" ]; + modSha256 = "0fagi529m1gf5jrqdlg9vxxq4yz9k9q8h92ch0gahp43kxfbgr4q"; + + meta = with lib; { + description = "Relational database with version control and CLI a-la Git."; + homepage = "https://github.com/liquidata-inc/dolt"; + license = licenses.asl20; + maintainers = with maintainers; [ danbst ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/servers/sql/monetdb/default.nix b/pkgs/servers/sql/monetdb/default.nix index 34ebebbbcc1..08d2f8e504b 100644 --- a/pkgs/servers/sql/monetdb/default.nix +++ b/pkgs/servers/sql/monetdb/default.nix @@ -3,7 +3,7 @@ }: let - version = "11.33.11"; + version = "11.35.3"; in stdenv.mkDerivation { pname = "monetdb"; @@ -11,7 +11,7 @@ in stdenv.mkDerivation { src = fetchurl { url = "https://dev.monetdb.org/downloads/sources/archive/MonetDB-${version}.tar.bz2"; - sha256 = "1fzgf1hplwlki6l6yvrk8an9y4jj40xzl4m5x1d8vi3xr526bzc9"; + sha256 = "185v8ph8jq8im77dmm20d64nwgjzzc01kz71rh09nb6x6rgcna2x"; }; postPatch = '' diff --git a/pkgs/servers/web-apps/matomo/default.nix b/pkgs/servers/web-apps/matomo/default.nix index 98c532d5ddc..5c88b8efb4a 100644 --- a/pkgs/servers/web-apps/matomo/default.nix +++ b/pkgs/servers/web-apps/matomo/default.nix @@ -3,8 +3,8 @@ let versions = { matomo = { - version = "3.11.0"; - sha256 = "1fbnmmzzsi3dfm9qm30wypxjcazl37mryaik9mlrb19hnp2md40q"; + version = "3.13.0"; + sha256 = "0h4jqibb86zw5l26r927qrbjhba8c79pc4xp3hgpi25p3fjncax8"; }; matomo-beta = { @@ -74,15 +74,22 @@ stdenv.mkDerivation rec { "vendor/leafo/lessphp/package.sh" "vendor/pear/archive_tar/sync-php4" "vendor/szymach/c-pchart/coverage.sh" + # drupal_test.sh does not exist in 3.12.0-b3; added for 3.13.0 + "vendor/twig/twig/drupal_test.sh" ]; # This fixes the consistency check in the admin interface + # + # The filesToFix list may contain files that are exclusive to only one of the versions we build + # make sure to test for existence to avoid erroring on an incompatible version and failing postFixup = '' pushd $out/share > /dev/null for f in $filesToFix; do - length="$(wc -c "$f" | cut -d' ' -f1)" - hash="$(md5sum "$f" | cut -d' ' -f1)" - sed -i "s:\\(\"$f\"[^(]*(\\).*:\\1\"$length\", \"$hash\"),:g" config/manifest.inc.php + if [ -f "$f" ]; then + length="$(wc -c "$f" | cut -d' ' -f1)" + hash="$(md5sum "$f" | cut -d' ' -f1)" + sed -i "s:\\(\"$f\"[^(]*(\\).*:\\1\"$length\", \"$hash\"),:g" config/manifest.inc.php + fi done popd > /dev/null ''; diff --git a/pkgs/shells/oil/default.nix b/pkgs/shells/oil/default.nix index eeb6f9ab6a9..13b36bf54ad 100644 --- a/pkgs/shells/oil/default.nix +++ b/pkgs/shells/oil/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "oil"; - version = "0.7.pre6"; + version = "0.7.pre9"; src = fetchurl { url = "https://www.oilshell.org/download/oil-${version}.tar.xz"; - sha256 = "1yhfrxrqd4jbjsf0g2fkxv8zypcndnikv9g15yp9szgp4sh1r9vv"; + sha256 = "1j17yxpjqv37vbl3qhnwl3gdmb33n9c6g6byxcc8mhbvbw91zi5i"; }; postPatch = '' diff --git a/pkgs/shells/zsh/oh-my-zsh/default.nix b/pkgs/shells/zsh/oh-my-zsh/default.nix index db19d340a57..97377c9fff0 100644 --- a/pkgs/shells/zsh/oh-my-zsh/default.nix +++ b/pkgs/shells/zsh/oh-my-zsh/default.nix @@ -4,13 +4,13 @@ { stdenv, fetchgit }: stdenv.mkDerivation rec { - version = "2019-11-23"; + version = "2019-12-18"; pname = "oh-my-zsh"; - rev = "7b73c9ca1ced57cdf545e860e880658753b81777"; + rev = "7dddfe0a39b75acbe265c47b6d1dc575d6dedd9f"; src = fetchgit { inherit rev; - url = "https://github.com/robbyrussell/oh-my-zsh"; - sha256 = "1mxqa2gf309vjdb1snbczrqwpwi7y6rnmv3n77hsph41bb6j64rz"; + url = "https://github.com/ohmyzsh/ohmyzsh"; + sha256 = "14p723ax6l24kwi72dwl3zjd7907p0f38bdhwk527fpihm7vgrj0"; }; pathsToLink = [ "/share/oh-my-zsh" ]; diff --git a/pkgs/shells/zsh/oh-my-zsh/update.sh b/pkgs/shells/zsh/oh-my-zsh/update.sh index 9567a2b6ae5..0146cac8496 100755 --- a/pkgs/shells/zsh/oh-my-zsh/update.sh +++ b/pkgs/shells/zsh/oh-my-zsh/update.sh @@ -4,11 +4,11 @@ set -eu -o pipefail oldVersion="$(nix-instantiate --eval -E "with import ./. {}; lib.getVersion oh-my-zsh" | tr -d '"')" -latestSha="$(curl -L -s https://api.github.com/repos/robbyrussell/oh-my-zsh/commits\?sha\=master\&since\=${oldVersion} | jq -r '.[0].sha')" +latestSha="$(curl -L -s https://api.github.com/repos/ohmyzsh/ohmyzsh/commits\?sha\=master\&since\=${oldVersion} | jq -r '.[0].sha')" url="$(nix-instantiate --eval -E "with import ./. {}; oh-my-zsh.src.url" | tr -d '"')" if [ ! "null" = "${latestSha}" ]; then - latestDate="$(curl -L -s https://api.github.com/repos/robbyrussell/oh-my-zsh/commits/${latestSha} | jq '.commit.author.date' | sed 's|"\(.*\)T.*|\1|g')" + latestDate="$(curl -L -s https://api.github.com/repos/ohmyzsh/ohmyzsh/commits/${latestSha} | jq '.commit.author.date' | sed 's|"\(.*\)T.*|\1|g')" update-source-version oh-my-zsh "${latestSha}" --version-key=rev update-source-version oh-my-zsh "${latestDate}" --ignore-same-hash nixpkgs="$(git rev-parse --show-toplevel)" diff --git a/pkgs/shells/zsh/zsh-history/0001-Fix-path-marshalling-when-saveing-config.patch b/pkgs/shells/zsh/zsh-history/0001-Fix-path-marshalling-when-saveing-config.patch deleted file mode 100644 index 0c4fd22c54f..00000000000 --- a/pkgs/shells/zsh/zsh-history/0001-Fix-path-marshalling-when-saveing-config.patch +++ /dev/null @@ -1,25 +0,0 @@ -From efc16fbe7e41784f218d9c6cb4239b209cd77214 Mon Sep 17 00:00:00 2001 -From: Christian Kampka <christian@kampka.net> -Date: Sat, 12 Oct 2019 21:47:47 +0200 -Subject: [PATCH 1/2] Fix path marshalling when saveing config - ---- - config/config.go | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/config/config.go b/config/config.go -index 69a10c5..b5c61fe 100644 ---- a/config/config.go -+++ b/config/config.go -@@ -26,7 +26,7 @@ func (p *Path) UnmarshalText(text []byte) error { - return nil - } - --func (p *Path) MarshalText() (text []byte, err error) { -+func (p Path) MarshalText() (text []byte, err error) { - return []byte(p.path), nil - } - --- -2.19.2 - diff --git a/pkgs/shells/zsh/zsh-history/default.nix b/pkgs/shells/zsh/zsh-history/default.nix index 6bbcdac2c17..ece3c87cb66 100644 --- a/pkgs/shells/zsh/zsh-history/default.nix +++ b/pkgs/shells/zsh/zsh-history/default.nix @@ -1,20 +1,16 @@ -{ lib, fetchFromGitHub, buildGoModule, installShellFiles }: +{ lib, fetchFromGitHub, buildGoModule, installShellFiles, nixosTests }: buildGoModule rec { pname = "zsh-history"; - version = "2019-10-07"; + version = "2019-12-10"; src = fetchFromGitHub { owner = "b4b4r07"; repo = "history"; - rev = "a08ad2dcffc852903ae54b0c5704b8a085009ef7"; - sha256 = "0r3p04my40dagsq1dssnk583qrlcps9f7ajp43z7mq73q3hrya5s"; + rev = "8da016bd91b0c2eb53c9980f00eee6abdbb097e2"; + sha256 = "13n643ik1zjvpk8h9458yd9ffahhbdnigmbrbmpn7b7g23wqqsi3"; }; - patches = [ - ./0001-Fix-path-marshalling-when-saveing-config.patch - ]; - nativeBuildInputs = [ installShellFiles ]; modSha256 = "0f10b86gyn7m7lw43c8y1m30mdg0i092a319v3cb2qj05jb9vn42"; @@ -33,4 +29,8 @@ buildGoModule rec { platforms = platforms.unix; maintainers = with maintainers; [ kampka ]; }; + + passthru.tests = { + zsh-history-shell-integration = nixosTests.zsh-history; + }; } diff --git a/pkgs/stdenv/generic/check-meta.nix b/pkgs/stdenv/generic/check-meta.nix index 6bd6a9bf41e..21ae809a222 100644 --- a/pkgs/stdenv/generic/check-meta.nix +++ b/pkgs/stdenv/generic/check-meta.nix @@ -67,7 +67,7 @@ let isUnfree (lib.lists.toList attrs.meta.license) && !allowUnfreePredicate attrs; - allowInsecureDefaultPredicate = x: builtins.elem x.name (config.permittedInsecurePackages or []); + allowInsecureDefaultPredicate = x: builtins.elem (getName x) (config.permittedInsecurePackages or []); allowInsecurePredicate = x: (config.allowInsecurePredicate or allowInsecureDefaultPredicate) x; hasAllowedInsecure = attrs: diff --git a/pkgs/tools/X11/imwheel/default.nix b/pkgs/tools/X11/imwheel/default.nix index f33e15e59cc..efed00f9639 100644 --- a/pkgs/tools/X11/imwheel/default.nix +++ b/pkgs/tools/X11/imwheel/default.nix @@ -10,10 +10,15 @@ stdenv.mkDerivation rec { buildInputs = [ libX11 libXext libXi libXmu libXt libXtst ]; - postPatch = '' - substituteInPlace Makefile.in --replace "ETCDIR = " "ETCDIR = $out" - substituteInPlace util.c --replace "/etc/X11/imwheel" "$out/etc/X11/imwheel" - ''; + makeFlags = [ + "sysconfdir=/etc" + "ETCDIR=/etc" + ]; + + installFlags = [ + "sysconfdir=${placeholder "out"}/etc" + "ETCDIR=${placeholder "out"}/etc" + ]; meta = with stdenv.lib; { homepage = "http://imwheel.sourceforge.net/"; diff --git a/pkgs/tools/X11/oblogout/default.nix b/pkgs/tools/X11/oblogout/default.nix deleted file mode 100644 index 9acd113d0ab..00000000000 --- a/pkgs/tools/X11/oblogout/default.nix +++ /dev/null @@ -1,36 +0,0 @@ -{ stdenv, fetchFromGitHub, intltool, file, pythonPackages, cairo }: - -pythonPackages.buildPythonApplication { - pname = "oblogout-unstable"; - version = "2009-11-18"; - - src = fetchFromGitHub { - owner = "nikdoof"; - repo = "oblogout"; - rev = "ee023158c03dee720a1af9b1307b14ed5a95f5a0"; - sha256 = "0nj87q94idb5ki4wnb2xipfgc6k6clr3rmm4xxh46b58z4zhhbmj"; - }; - - nativeBuildInputs = [ intltool file pythonPackages.distutils_extra ]; - - buildInputs = [ cairo ]; - - propagatedBuildInputs = [ pythonPackages.pygtk pythonPackages.pillow pythonPackages.dbus-python ]; - - patches = [ ./oblogout-0.3-fixes.patch ]; - - postPatch = '' - substituteInPlace data/oblogout --replace sys.prefix \"$out/${pythonPackages.python.sitePackages}\" - substituteInPlace oblogout/__init__.py --replace sys.prefix \"$out\" - mkdir -p $out/share/doc - cp -a README $out/share/doc - ''; - - meta = { - description = "Openbox logout script"; - homepage = https://launchpad.net/oblogout; - license = stdenv.lib.licenses.gpl2; - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.romildo ]; - }; -} diff --git a/pkgs/tools/X11/oblogout/oblogout-0.3-fixes.patch b/pkgs/tools/X11/oblogout/oblogout-0.3-fixes.patch deleted file mode 100644 index c58103c6d40..00000000000 --- a/pkgs/tools/X11/oblogout/oblogout-0.3-fixes.patch +++ /dev/null @@ -1,66 +0,0 @@ -diff --git a/data/oblogout b/data/oblogout -index 8058c4a..dfe5285 100755 ---- a/data/oblogout -+++ b/data/oblogout -@@ -77,8 +77,10 @@ def main(argv = None): - config = 'data/oblogout.conf' - elif os.path.isfile('%s/.config/oblogout.conf' % os.getenv("HOME")): - config = '%s/.config/oblogout.conf' % os.getenv("HOME") -- else: -+ elif os.path.isfile('/etc/oblogout.conf'): - config = '/etc/oblogout.conf' -+ else: -+ config = sys.prefix + '/etc/oblogout.conf' - - # Check config in local path, if it exists pass it on - if not os.path.isfile(config): -diff --git a/data/oblogout.conf b/data/oblogout.conf -index 810872c..b1c1009 100644 ---- a/data/oblogout.conf -+++ b/data/oblogout.conf -@@ -1,11 +1,11 @@ - [settings] --usehal = true -+usehal = false - - [looks] - opacity = 70 - bgcolor = black - buttontheme = simplistic --buttons = cancel, logout, restart, shutdown, suspend, lock -+buttons = cancel, logout, restart, shutdown, suspend - - [shortcuts] - cancel = Escape -@@ -17,11 +17,11 @@ lock = K - hibernate = H - - [commands] --shutdown = shutdown -h now --restart = reboot --suspend = pmi action suspend --hibernate = pmi action hibernate --safesuspend = safesuspend --lock = gnome-screensaver-command -l --switchuser = gdm-control --switch-user -+shutdown = systemctl poweroff -+restart = systemctl reboot -+suspend = systemctl suspend -+hibernate = systemctl hibernate -+# safesuspend = safesuspend -+# lock = gnome-screensaver-command -l -+# switchuser = gdm-control --switch-user - logout = openbox --exit -diff --git a/oblogout/__init__.py b/oblogout/__init__.py -index b9e4e01..12f521f 100644 ---- a/oblogout/__init__.py -+++ b/oblogout/__init__.py -@@ -138,7 +138,7 @@ class OpenboxLogout(): - self.logger.debug("Rendering Fade") - # Convert Pixbuf to PIL Image - wh = (pb.get_width(),pb.get_height()) -- pilimg = Image.fromstring("RGB", wh, pb.get_pixels()) -+ pilimg = Image.frombytes("RGB", wh, pb.get_pixels()) - - pilimg = pilimg.point(lambda p: (p * self.opacity) / 255 ) - diff --git a/pkgs/tools/X11/winswitch/default.nix b/pkgs/tools/X11/winswitch/default.nix deleted file mode 100644 index 404cef72a3e..00000000000 --- a/pkgs/tools/X11/winswitch/default.nix +++ /dev/null @@ -1,47 +0,0 @@ -{ stdenv, fetchurl, pythonPackages -, which, xpra, xmodmap }: - -let - base = pythonPackages.buildPythonApplication rec { - pname = "winswitch"; - namePrefix = ""; - version = "0.12.23"; - - src = fetchurl { - url = "http://winswitch.org/src/${pname}-${version}.src.tar.bz2"; - sha256 = "1m0akjcdlsgng426rwvzlcl76kjm993icj0pggvha40cizig1yd9"; - }; - - propagatedBuildInputs = with pythonPackages; [ - pygtk twisted pycrypto pyasn1 which xpra xmodmap - ]; - - patchPhase = '' - sed -i -r -e 's|(PREFIX_DIR *= *).*|\1"'"$out"'"|' \ - -e 's|(PREFIX_SEARCH_ORDER *= *).*|\1["'"$out"'"]|' \ - -e 's|(ETC_SEARCH_ORDER *= *).*|\1["'"$out/etc"'"]|' \ - -e 's|(BIN_SEARCH_ORDER *= *).*|\1["'"$out/bin"'"]|' \ - winswitch/util/paths.py - - sed -i -e '/elif *LINUX:/,/distro_helper/{ - s/elif *LINUX:.*/else: name = "NixOS"/p - /distro_helper/!d - }' winswitch/util/distro_packaging_util.py - ''; - - preInstall = '' - # see https://bitbucket.org/pypa/setuptools/issue/130/install_data-doesnt-respect-prefix - python setup.py install_data --install-dir=$out --root=$out - sed -i '/data_files = data_files/d' setup.py - ''; - - doCheck = false; - - meta.platforms = stdenv.lib.platforms.linux; - meta.broken = true; - }; -in stdenv.lib.overrideDerivation base (b: { - postFixup = b.postFixup + '' - sed -i -e 's/\''${PATH:+:}\$PATH//g' "$out/bin"/* - ''; -}) diff --git a/pkgs/tools/X11/xsecurelock/default.nix b/pkgs/tools/X11/xsecurelock/default.nix index 6e6aa1fb60e..30d7f69aeb5 100644 --- a/pkgs/tools/X11/xsecurelock/default.nix +++ b/pkgs/tools/X11/xsecurelock/default.nix @@ -32,11 +32,6 @@ stdenv.mkDerivation rec { EOF ''; - preInstall = '' - substituteInPlace helpers/saver_blank \ - --replace 'protect xset' 'protect ${xset}/bin/xset' - ''; - meta = with lib; { description = "X11 screen lock utility with security in mind"; homepage = https://github.com/google/xsecurelock; diff --git a/pkgs/tools/admin/ansible/default.nix b/pkgs/tools/admin/ansible/default.nix index eaba5225150..5b724fb0bf9 100644 --- a/pkgs/tools/admin/ansible/default.nix +++ b/pkgs/tools/admin/ansible/default.nix @@ -7,21 +7,21 @@ ansible_2_7 = with python3Packages; toPythonApplication (ansible.overridePythonAttrs(old: rec { pname = "ansible"; - version = "2.7.11"; + version = "2.7.15"; src = fetchurl { url = "https://releases.ansible.com/ansible/${pname}-${version}.tar.gz"; - sha256 = "0zipzm9al6k74h88b6zkddpcbxqs4cms7lidid6wn1vx3d3dxrp7"; + sha256 = "1kjqr35c11njyi3f2rjab6821bhqcrdykv4285q76gwv0qynigwr"; }; })); ansible_2_6 = with python3Packages; toPythonApplication (ansible.overridePythonAttrs(old: rec { pname = "ansible"; - version = "2.6.17"; + version = "2.6.20"; src = fetchurl { url = "https://releases.ansible.com/ansible/${pname}-${version}.tar.gz"; - sha256 = "0ixr3g1nb02xblqyk87bzag8sj8phy37m24xflabfl1k2zfh0313"; + sha256 = "02ra9q2mifyawn0719y78wrbqzik73aymlzwi90fq71jgyfvkkqn"; }; })); } diff --git a/pkgs/tools/admin/awscli/default.nix b/pkgs/tools/admin/awscli/default.nix index 02a27b0fe48..1f327e7ed55 100644 --- a/pkgs/tools/admin/awscli/default.nix +++ b/pkgs/tools/admin/awscli/default.nix @@ -2,7 +2,6 @@ , python3 , groff , less -, fetchpatch }: let @@ -15,7 +14,6 @@ let sha256 = "25df4e10c263fb88b5ace923dd84bf9aa7f5019687b5e55382ffcdb8bede9db5"; }; }); - prompt_toolkit = self.callPackage ../../../development/python-modules/prompt_toolkit/1.nix { }; }; }; diff --git a/pkgs/tools/admin/awsweeper/default.nix b/pkgs/tools/admin/awsweeper/default.nix new file mode 100644 index 00000000000..91ef7ee022e --- /dev/null +++ b/pkgs/tools/admin/awsweeper/default.nix @@ -0,0 +1,22 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "awsweeper"; + version = "0.4.1"; + + src = fetchFromGitHub { + owner = "cloudetc"; + repo = pname; + rev = "v${version}"; + sha256 = "0if2sfxd28m832zyiy40grwa4may45zq20h35yxf8bq0wxvp0q3f"; + }; + + modSha256 = "0nzc8ib2c3wlwk97qq45kgpnval69v8nbxhkfabcx0idipx3pbvk"; + + meta = with lib; { + description = "A tool to clean out your AWS account"; + homepage = "https://github.com/cloudetc/awsweeper/"; + license = licenses.mpl20; + maintainers = [ maintainers.marsam ]; + }; +} diff --git a/pkgs/tools/admin/azure-cli/python-packages.nix b/pkgs/tools/admin/azure-cli/python-packages.nix index 958bf31673c..529bc4d50d3 100644 --- a/pkgs/tools/admin/azure-cli/python-packages.nix +++ b/pkgs/tools/admin/azure-cli/python-packages.nix @@ -111,6 +111,9 @@ let ''; }; + azure-mgmt-recoveryservicesbackup = overrideAzureMgmtPackage super.azure-mgmt-recoveryservicesbackup "0.4.0" "zip" + "0zssvzdip23yzaxlac9rlzg9mlyjl97fwr0gj8y27z8j58pwj72i"; + azure-mgmt-resource = overrideAzureMgmtPackage super.azure-mgmt-resource "4.0.0" "zip" "0gy89bi89ikg5hps8rvnq28r33lixci3sk2m86jvziv9fh9rz41b"; diff --git a/pkgs/tools/admin/eksctl/default.nix b/pkgs/tools/admin/eksctl/default.nix index 7af60ab33b4..e5fcf3933eb 100644 --- a/pkgs/tools/admin/eksctl/default.nix +++ b/pkgs/tools/admin/eksctl/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "eksctl"; - version = "0.11.0"; + version = "0.11.1"; src = fetchFromGitHub { owner = "weaveworks"; repo = pname; rev = version; - sha256 = "0dh2fa60w5jbxkrn4j4nf6dn4ljcfpl2xf8vx0j49k36dirfp8y3"; + sha256 = "197lf6cb1maam1yxy29wgp4dkakaavmwqvq2d9i4qxhscalrdra5"; }; modSha256 = "04ba3dyfwlf0m6kn7yp7qyp3h2qdwp17y1f9pa79y3c6sd2nadk2"; diff --git a/pkgs/tools/admin/procs/default.nix b/pkgs/tools/admin/procs/default.nix index 24f8036b428..20e9c8b3d47 100644 --- a/pkgs/tools/admin/procs/default.nix +++ b/pkgs/tools/admin/procs/default.nix @@ -1,22 +1,30 @@ -{ stdenv, fetchFromGitHub, rustPlatform +{ stdenv, fetchFromGitHub, rustPlatform, fetchpatch , Security }: rustPlatform.buildRustPackage rec { pname = "procs"; - version = "0.8.13"; + version = "0.8.16"; src = fetchFromGitHub { owner = "dalance"; repo = pname; rev = "v${version}"; - sha256 = "0yy41v2crds9500fa4r0kqiddciqkilr2h13nrjqy44ckvw2mi5y"; + sha256 = "0l4n3gr1sc7wfa21p8yh7idaii0mnfpyqp4cg7f9l4345isy94vq"; }; - cargoSha256 = "1gnl97h0l9k8xnrwl6807qlbx13vd45kmla02mk9p1h52sr0din5"; + cargoSha256 = "03c63dlzvag341n6la1s61ccri1avlprd91m11z9zzjhi9b46kcr"; buildInputs = stdenv.lib.optional stdenv.isDarwin Security; + patches = [ + # Fix tests on darwin. Remove with the next release + (fetchpatch { + url = "https://github.com/dalance/procs/commit/bb554e247b5b339bc00fa5dd2e771b0d7cb09cd5.patch"; + sha256 = "1szvvifa4pdbgdsmdj5f0zq6qzf1lh6wwc6ipawblfzwmg7d9wvk"; + }) + ]; + meta = with stdenv.lib; { description = "A modern replacement for ps written in Rust"; homepage = "https://github.com/dalance/procs"; diff --git a/pkgs/tools/admin/tigervnc/default.nix b/pkgs/tools/admin/tigervnc/default.nix index 3536e39418e..78fa4359c91 100644 --- a/pkgs/tools/admin/tigervnc/default.nix +++ b/pkgs/tools/admin/tigervnc/default.nix @@ -5,7 +5,7 @@ , cmake, gettext, libtool , libGLU , gnutls, pam, nettle -, xterm, openssh +, xterm, openssh, perl , makeWrapper}: with stdenv.lib; @@ -79,7 +79,7 @@ stdenv.mkDerivation rec { buildInputs = with xorg; [ libjpeg_turbo fltk pixman - gnutls pam nettle + gnutls pam nettle perl xorgproto utilmacros libXtst libXext libX11 libXext libICE libXi libSM libXft libxkbfile libXfont2 libpciaccess diff --git a/pkgs/tools/audio/abcmidi/default.nix b/pkgs/tools/audio/abcmidi/default.nix index 8d990f3a3a8..804f9f3ed24 100644 --- a/pkgs/tools/audio/abcmidi/default.nix +++ b/pkgs/tools/audio/abcmidi/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "abcMIDI"; - version = "2019.10.13"; + version = "2019.11.11"; src = fetchzip { url = "https://ifdo.ca/~seymour/runabc/${pname}-${version}.zip"; - sha256 = "1i2gpfrzi12smrlni25fcah6a8rb5l7p358r60jbysc2bpzxwd9l"; + sha256 = "0xid13jqhbknrs31j74iwgjm0h0c64w3kqk9g9am1pkjwxh8d460"; }; # There is also a file called "makefile" which seems to be preferred by the standard build phase diff --git a/pkgs/tools/audio/beets/beet-check-tests.patch b/pkgs/tools/audio/beets/beet-check-tests.patch new file mode 100644 index 00000000000..2de97b86c8b --- /dev/null +++ b/pkgs/tools/audio/beets/beet-check-tests.patch @@ -0,0 +1,17 @@ +diff --git a/test/cli_test.py b/test/cli_test.py +index 26df140..2eb913c 100644 +--- a/test/cli_test.py ++++ b/test/cli_test.py +@@ -372,12 +372,6 @@ class ToolListTest(TestHelper, TestCase): + self.assertIn('flac', stdout.getvalue()) + self.assertIn('oggz-validate', stdout.getvalue()) + +- def test_found_mp3val(self): +- shutil.copy('/bin/echo', os.path.join(self.temp_dir, 'mp3val')) +- with captureStdout() as stdout: +- beets.ui._raw_main(['check', '--list-tools']) +- self.assertRegexpMatches(stdout.getvalue(), r'mp3val *found') +- + def test_oggz_validate_not_found(self): + with captureStdout() as stdout: + beets.ui._raw_main(['check', '--list-tools']) diff --git a/pkgs/tools/audio/beets/check-plugin.nix b/pkgs/tools/audio/beets/check-plugin.nix new file mode 100644 index 00000000000..49ee97ead06 --- /dev/null +++ b/pkgs/tools/audio/beets/check-plugin.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, beets, pythonPackages, flac, liboggz, mp3val }: + +pythonPackages.buildPythonApplication rec { + name = "beets-check"; + version = "0.12.0"; + + src = fetchFromGitHub { + repo = "beets-check"; + owner = "geigerzaehler"; + rev = "v${version}"; + sha256 = "0b2ijjf0gycs6b40sm33ida3sjygjiv4spb5mba52vysc7iwmnjn"; + }; + + nativeBuildInputs = [ beets ]; + checkInputs = [ pythonPackages.nose flac liboggz mp3val ]; + propagatedBuildInputs = [ flac liboggz mp3val ]; + + # patch out broken tests + patches = [ ./beet-check-tests.patch ]; + + # patch out futures dependency, it is only needed for Python2 which we don't + # support. + prePatch = '' + sed -i "/futures/d" setup.py + ''; + + checkPhase = "nosetests"; + + meta = with stdenv.lib; { + description = "Beets plugin to Verify and store checksums in your library"; + homepage = https://github.com/geigerzaehler/beets-check; + license = licenses.mit; + maintainers = with maintainers; [ lovesegfault ]; + }; +} diff --git a/pkgs/tools/audio/beets/default.nix b/pkgs/tools/audio/beets/default.nix index 9509eccabdc..b4dfa71ca96 100644 --- a/pkgs/tools/audio/beets/default.nix +++ b/pkgs/tools/audio/beets/default.nix @@ -29,6 +29,7 @@ # External plugins , enableAlternatives ? false +, enableCheck ? false, liboggz ? null , enableCopyArtifacts ? false , bashInteractive, bash-completion @@ -37,6 +38,7 @@ assert enableAbsubmit -> essentia-extractor != null; assert enableAcoustid -> pythonPackages.pyacoustid != null; assert enableBadfiles -> flac != null && mp3val != null; +assert enableCheck -> flac != null && mp3val != null && liboggz != null; assert enableConvert -> ffmpeg != null; assert enableDiscogs -> pythonPackages.discogs_client != null; assert enableFetchart -> pythonPackages.responses != null; @@ -106,6 +108,7 @@ let plugins = { alternatives = callPackage ./alternatives-plugin.nix pluginArgs; + check = callPackage ./check-plugin.nix pluginArgs; copyartifacts = callPackage ./copyartifacts-plugin.nix pluginArgs; }; @@ -142,6 +145,7 @@ in pythonPackages.buildPythonApplication rec { || enableSubsonicupdate || enableAcousticbrainz) pythonPackages.requests + ++ optional enableCheck plugins.check ++ optional enableConvert ffmpeg ++ optional enableDiscogs pythonPackages.discogs_client ++ optional enableGmusic pythonPackages.gmusicapi @@ -246,6 +250,10 @@ in pythonPackages.buildPythonApplication rec { makeWrapperArgs = [ "--set GI_TYPELIB_PATH \"$GI_TYPELIB_PATH\"" "--set GST_PLUGIN_SYSTEM_PATH_1_0 \"$GST_PLUGIN_SYSTEM_PATH_1_0\"" ]; + passthru = { + externalPlugins = plugins; + }; + meta = { description = "Music tagger and library organizer"; homepage = http://beets.io; diff --git a/pkgs/tools/backup/restic/default.nix b/pkgs/tools/backup/restic/default.nix index b78fc9b61f7..26f05d41954 100644 --- a/pkgs/tools/backup/restic/default.nix +++ b/pkgs/tools/backup/restic/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "restic"; - version = "0.9.5"; + version = "0.9.6"; goPackagePath = "github.com/restic/restic"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "restic"; repo = "restic"; rev = "v${version}"; - sha256 = "1bhn3xwlycpnjg2qbqblwxn3apj43lr5cakgkmrblk13yfwfv5xv"; + sha256 = "0lydll93n1lcn1fl669b9cikmzz9d6vfpc8ky3ng5fi8kj3v1dz7"; }; buildPhase = '' diff --git a/pkgs/tools/compression/advancecomp/default.nix b/pkgs/tools/compression/advancecomp/default.nix index 8bee8059fe2..46c8f4338c6 100644 --- a/pkgs/tools/compression/advancecomp/default.nix +++ b/pkgs/tools/compression/advancecomp/default.nix @@ -1,5 +1,9 @@ -{ stdenv, fetchFromGitHub -, autoreconfHook, zlib }: +{ stdenv +, fetchFromGitHub +, fetchpatch +, autoreconfHook +, zlib +}: stdenv.mkDerivation rec { pname = "advancecomp"; @@ -15,6 +19,15 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; buildInputs = [ zlib ]; + patches = [ + (fetchpatch { + name = "CVE-2019-9210.patch"; + url = "https://github.com/amadvance/advancecomp/commit/fcf71a89265c78fc26243574dda3a872574a5c02.patch"; + sha256 = "0cdv9g87c1y8zwhqkd9ba2zjw4slcvg7yzcqv43idvnwb5fl29n7"; + excludes = [ "doc/history.d" ]; + }) + ]; + meta = with stdenv.lib; { description = ''A set of tools to optimize deflate-compressed files''; license = licenses.gpl3 ; diff --git a/pkgs/tools/compression/lbzip2/default.nix b/pkgs/tools/compression/lbzip2/default.nix index cf616a21e0a..7e9cc055abf 100644 --- a/pkgs/tools/compression/lbzip2/default.nix +++ b/pkgs/tools/compression/lbzip2/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { }; meta = with stdenv.lib; { - homepage = http://lbzip2.org/; + homepage = "https://github.com/kjn/lbzip2"; # Formerly http://lbzip2.org/ description = "Parallel bzip2 compression utility"; license = licenses.gpl3; maintainers = with maintainers; [ abbradar ]; diff --git a/pkgs/tools/filesystems/btrfs-progs/default.nix b/pkgs/tools/filesystems/btrfs-progs/default.nix index e04b9efe48f..1da8470280b 100644 --- a/pkgs/tools/filesystems/btrfs-progs/default.nix +++ b/pkgs/tools/filesystems/btrfs-progs/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "btrfs-progs"; - version = "5.3.1"; + version = "5.4"; src = fetchurl { url = "mirror://kernel/linux/kernel/people/kdave/btrfs-progs/btrfs-progs-v${version}.tar.xz"; - sha256 = "0f6s1iwiqbncrvxp74k50s88x6zqf85sjxg04kyni82l1vk1m8xz"; + sha256 = "1ykhasv0jc3qi3xrm5841mzkmlbkjw6rm70gl4aww90jj6ak55qg"; }; nativeBuildInputs = [ diff --git a/pkgs/tools/filesystems/e2fsprogs/default.nix b/pkgs/tools/filesystems/e2fsprogs/default.nix index eb17e9fc60c..0fd7062ac6c 100644 --- a/pkgs/tools/filesystems/e2fsprogs/default.nix +++ b/pkgs/tools/filesystems/e2fsprogs/default.nix @@ -1,4 +1,4 @@ -{ stdenv, buildPackages, fetchurl, fetchpatch, pkgconfig, libuuid, gettext, texinfo }: +{ stdenv, buildPackages, fetchurl, fetchpatch, pkgconfig, libuuid, gettext, texinfo, shared ? true }: stdenv.mkDerivation rec { pname = "e2fsprogs"; @@ -36,7 +36,9 @@ stdenv.mkDerivation rec { configureFlags = if stdenv.isLinux then [ - "--enable-elf-shlibs" + # It seems that the e2fsprogs is one of the few packages that cannot be + # build with shared and static libs. + (if shared then "--enable-elf-shlibs" else "--disable-elf-shlibs") "--enable-symlink-install" "--enable-relative-symlinks" "--with-crond-dir=no" diff --git a/pkgs/tools/filesystems/fuse-overlayfs/default.nix b/pkgs/tools/filesystems/fuse-overlayfs/default.nix index c65b2a63f2d..0d7bcdcd0f2 100644 --- a/pkgs/tools/filesystems/fuse-overlayfs/default.nix +++ b/pkgs/tools/filesystems/fuse-overlayfs/default.nix @@ -2,24 +2,25 @@ stdenv.mkDerivation rec { pname = "fuse-overlayfs"; - version = "0.7"; + version = "0.7.2"; src = fetchFromGitHub { owner = "containers"; repo = pname; rev = "v${version}"; - sha256 = "1nhqy1fdzhkjhqs54nq66zj5bf85n3gr4k6zl0hswdvhg6flkg75"; + sha256 = "1ybrki63ixrkraynms5i4jiil9901whwxs6p61h2c2ild8w2ir8n"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; + buildInputs = [ fuse3 ]; meta = with lib; { - homepage = https://github.com/containers/fuse-overlayfs; description = "FUSE implementation for overlayfs"; longDescription = "An implementation of overlay+shiftfs in FUSE for rootless containers."; license = licenses.gpl3; + maintainers = with maintainers; [ ma9e ]; platforms = platforms.unix; - maintainers = [ maintainers.ma9e ]; + inherit (src.meta) homepage; }; } diff --git a/pkgs/tools/filesystems/nixpart/0.4/blivet.nix b/pkgs/tools/filesystems/nixpart/0.4/blivet.nix index 48a72c5dd62..da2dff6b77a 100644 --- a/pkgs/tools/filesystems/nixpart/0.4/blivet.nix +++ b/pkgs/tools/filesystems/nixpart/0.4/blivet.nix @@ -3,6 +3,7 @@ { stdenv, fetchurl, buildPythonApplication, pykickstart, pyparted, pyblock , libselinux, cryptsetup, multipath_tools, lsof, utillinux , useNixUdev ? true, systemd ? null +# useNixUdev is here for bw compatibility }: assert useNixUdev -> systemd != null; @@ -28,7 +29,6 @@ buildPythonApplication rec { }' blivet/formats/__init__.py sed -i -e 's|"lsof"|"${lsof}/bin/lsof"|' blivet/formats/fs.py sed -i -r -e 's|"(u?mount)"|"${utillinux.bin}/bin/\1"|' blivet/util.py - '' + stdenv.lib.optionalString useNixUdev '' sed -i -e '/find_library/,/find_library/ { c libudev = "${systemd.lib}/lib/libudev.so.1" }' blivet/pyudev.py diff --git a/pkgs/tools/graphics/dpic/default.nix b/pkgs/tools/graphics/dpic/default.nix index 7a9217302d6..d28f73dd91c 100644 --- a/pkgs/tools/graphics/dpic/default.nix +++ b/pkgs/tools/graphics/dpic/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "dpic"; - version = "2019.08.30"; + version = "2019.11.30"; src = fetchurl { url = "https://ece.uwaterloo.ca/~aplevich/dpic/${pname}-${version}.tar.gz"; - sha256 = "059m53cppw67hwygm7l03ciaxbnaldx63bqdhx1vzbx3kiwz8iw2"; + sha256 = "0rgd31mdbaqbm9rz49872s17n25n5ajxcn61xailz3f0kzr4f3dg"; }; phases = [ "unpackPhase" "buildPhase" "installPhase" ]; diff --git a/pkgs/tools/graphics/gmic-qt/default.nix b/pkgs/tools/graphics/gmic-qt/default.nix index cb0862c6373..a8dd35ce7b0 100644 --- a/pkgs/tools/graphics/gmic-qt/default.nix +++ b/pkgs/tools/graphics/gmic-qt/default.nix @@ -7,7 +7,7 @@ , fetchFromGitLab , cmake , pkgconfig -, opencv +, opencv3 , openexr , graphicsmagick , fftw @@ -120,7 +120,7 @@ mkDerivation rec { libjpeg libtiff libpng - opencv + opencv3 openexr graphicsmagick curl diff --git a/pkgs/tools/graphics/gmic/default.nix b/pkgs/tools/graphics/gmic/default.nix index 54b140cdb3e..3f181d12ba0 100644 --- a/pkgs/tools/graphics/gmic/default.nix +++ b/pkgs/tools/graphics/gmic/default.nix @@ -3,7 +3,7 @@ , cmake , ninja , pkgconfig -, opencv +, opencv3 , openexr , graphicsmagick , fftw @@ -36,7 +36,7 @@ stdenv.mkDerivation rec { libjpeg libtiff libpng - opencv + opencv3 openexr graphicsmagick ]; diff --git a/pkgs/tools/graphics/gnuplot/default.nix b/pkgs/tools/graphics/gnuplot/default.nix index 7e823711e33..9f6393b6372 100644 --- a/pkgs/tools/graphics/gnuplot/default.nix +++ b/pkgs/tools/graphics/gnuplot/default.nix @@ -11,14 +11,14 @@ , fontconfig ? null , gnused ? null , coreutils ? null -, withQt ? false, qttools, qtbase, qtsvg +, withQt ? false, mkDerivation, qttools, qtbase, qtsvg }: assert libX11 != null -> (fontconfig != null && gnused != null && coreutils != null); let withX = libX11 != null && !aquaterm && !stdenv.isDarwin; in -stdenv.mkDerivation rec { +(if withQt then mkDerivation else stdenv.mkDerivation) rec { name = "gnuplot-5.2.7"; src = fetchurl { diff --git a/pkgs/tools/graphics/graphviz/base.nix b/pkgs/tools/graphics/graphviz/base.nix index cd2302efd16..700bed237bd 100644 --- a/pkgs/tools/graphics/graphviz/base.nix +++ b/pkgs/tools/graphics/graphviz/base.nix @@ -7,7 +7,7 @@ assert stdenv.isDarwin -> ApplicationServices != null; let - inherit (stdenv.lib) optionals optionalString; + inherit (stdenv.lib) optional optionals optionalString; raw_patch = # https://gitlab.com/graphviz/graphviz/issues/1367 CVE-2018-10196 fetchpatch { @@ -17,11 +17,13 @@ let excludes = ["tests/*"]; # we don't run them and they don't apply }; # the patch needs a small adaption for older versions - patch = if stdenv.lib.versionAtLeast version "2.37" then raw_patch else + patchToUse = if stdenv.lib.versionAtLeast version "2.37" then raw_patch else stdenv.mkDerivation { inherit (raw_patch) name; buildCommand = "sed s/dot_root/agroot/g ${raw_patch} > $out"; }; + # 2.42 has the patch included + patches = optional (stdenv.lib.versionOlder version "2.42") patchToUse; in stdenv.mkDerivation { @@ -52,9 +54,7 @@ stdenv.mkDerivation { "--with-ltdl-include=${libtool}/include" ] ++ stdenv.lib.optional (xorg == null) [ "--without-x" ]; - patches = [ - patch - ]; + inherit patches; postPatch = '' for f in $(find . -name Makefile.in); do diff --git a/pkgs/tools/graphics/graphviz/default.nix b/pkgs/tools/graphics/graphviz/default.nix index 7249a6cdaad..c79fe3aaf4d 100644 --- a/pkgs/tools/graphics/graphviz/default.nix +++ b/pkgs/tools/graphics/graphviz/default.nix @@ -1,5 +1,5 @@ import ./base.nix rec { - rev = "67cd2e5121379a38e0801cc05cce5033f8a2a609"; - version = "2.40.1"; - sha256 = "1xjqq3g2n6jgwp5xzyvibgrxawlskkpam69fjjz9ksrrjas2qwzj"; + rev = "da4c2ec6f24ca1b6d1752c6b5bc4389e55682147"; # use rev as tags have disappeared before + version = "2.42.2"; + sha256 = "0lacl11amyvj04j78m63qifljl4c0nkyy50z4bkg8mg9j4hjdy0x"; } diff --git a/pkgs/tools/graphics/ifm/default.nix b/pkgs/tools/graphics/ifm/default.nix new file mode 100644 index 00000000000..c6e8df31dd0 --- /dev/null +++ b/pkgs/tools/graphics/ifm/default.nix @@ -0,0 +1,25 @@ +{ lib, stdenv, fetchzip, autoreconfHook, bison, flex, help2man, perl, tk }: + +stdenv.mkDerivation rec { + pname = "ifm"; + version = "2015-11-08"; + + src = fetchzip { + url = "https://bitbucket.org/zondo/ifm/get/dca0774e4d3a.zip"; + sha256 = "14af21qjd5jvsscm6vxpsdrnipdr33g6niagzmykrhyfhwcbjahi"; + }; + + nativeBuildInputs = [ autoreconfHook bison flex help2man ]; + + buildInputs = [ perl tk ]; # perl and wish are not run but written as shebangs. + + enableParallelBuilding = false; # ifm-scan.l:16:10: fatal error: ifm-parse.h: No such file or directory + + meta = with lib; { + homepage = https://bitbucket.org/zondo/ifm; + description = "Interactive fiction mapper"; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ orivej ]; + }; +} diff --git a/pkgs/tools/graphics/vips/default.nix b/pkgs/tools/graphics/vips/default.nix index 3efbd6e0765..e551fc382fb 100644 --- a/pkgs/tools/graphics/vips/default.nix +++ b/pkgs/tools/graphics/vips/default.nix @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { pname = "vips"; - version = "8.8.3"; + version = "8.8.4"; src = fetchFromGitHub { owner = "libvips"; repo = "libvips"; rev = "v${version}"; - sha256 = "0wlwcgcp7d3vhjdbi3xlpvnj4jl4321vac9v1sr1mis4aivwzsrn"; + sha256 = "1gw8srjf5r6dhg6g5hh91if302mcr44dzy87mv230ar7027kwwbi"; # Remove unicode file names which leads to different checksums on HFS+ # vs. other filesystems because of unicode normalisation. extraPostFetch = '' diff --git a/pkgs/tools/inputmethods/fusuma/Gemfile.lock b/pkgs/tools/inputmethods/fusuma/Gemfile.lock index 4038b50b44f..c35e7658d63 100644 --- a/pkgs/tools/inputmethods/fusuma/Gemfile.lock +++ b/pkgs/tools/inputmethods/fusuma/Gemfile.lock @@ -1,7 +1,7 @@ GEM remote: https://rubygems.org/ specs: - fusuma (0.10.2) + fusuma (1.3.0) PLATFORMS ruby @@ -10,4 +10,4 @@ DEPENDENCIES fusuma BUNDLED WITH - 1.16.3 + 1.17.3 diff --git a/pkgs/tools/inputmethods/fusuma/default.nix b/pkgs/tools/inputmethods/fusuma/default.nix index b410a21cd6b..a8901dfb0e4 100644 --- a/pkgs/tools/inputmethods/fusuma/default.nix +++ b/pkgs/tools/inputmethods/fusuma/default.nix @@ -16,9 +16,9 @@ bundlerApp { meta = with lib; { description = "Multitouch gestures with libinput driver on X11, Linux"; - homepage = https://github.com/iberianpig/fusuma; - license = licenses.mit; - maintainers = with maintainers; [ jfrankenau nicknovitski ]; - platforms = platforms.linux; + homepage = "https://github.com/iberianpig/fusuma"; + license = licenses.mit; + maintainers = with maintainers; [ jfrankenau nicknovitski filalex77 ]; + platforms = platforms.linux; }; } diff --git a/pkgs/tools/inputmethods/fusuma/gemset.nix b/pkgs/tools/inputmethods/fusuma/gemset.nix index 2edf9c0886f..2dd9af421ba 100644 --- a/pkgs/tools/inputmethods/fusuma/gemset.nix +++ b/pkgs/tools/inputmethods/fusuma/gemset.nix @@ -1,10 +1,12 @@ { fusuma = { + groups = ["default"]; + platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0hj64kafxj29gk53vj2syhs3vdywl3h9cpiknaqqm4srjx9g04a0"; + sha256 = "150jc8jyqj3w4k13lf1ihqmm2sld1yawp4jwnf43jixnc9rmzx6f"; type = "gem"; }; - version = "0.10.2"; + version = "1.3.0"; }; } \ No newline at end of file diff --git a/pkgs/tools/inputmethods/gebaar-libinput/default.nix b/pkgs/tools/inputmethods/gebaar-libinput/default.nix new file mode 100644 index 00000000000..6d4947e517e --- /dev/null +++ b/pkgs/tools/inputmethods/gebaar-libinput/default.nix @@ -0,0 +1,25 @@ +{ stdenv, lib, fetchFromGitHub, pkgconfig, cmake, libinput, zlib }: + +stdenv.mkDerivation rec { + pname = "gebaar-libinput"; + version = "0.0.5"; + + src = fetchFromGitHub { + owner = "Coffee2CodeNL"; + repo = pname; + rev = "v${version}"; + sha256 = "1kqcgwkia1p195xr082838dvj1gqif9d63i8a52jb0lc32zzizh6"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ pkgconfig cmake ]; + buildInputs = [ libinput zlib ]; + + meta = with lib; { + description = "Gebaar, A Super Simple WM Independent Touchpad Gesture Daemon for libinput"; + homepage = "https://github.com/Coffee2CodeNL/gebaar-libinput"; + license = licenses.gpl3; + platforms = platforms.linux; + maintainers = with maintainers; [ colemickens lovesegfault ]; + }; +} diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-anthy/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-anthy/default.nix index d2f68fd5269..cfdfa85ad9f 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-anthy/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-anthy/default.nix @@ -1,35 +1,57 @@ -{ stdenv, fetchurl, intltool, pkgconfig -, anthy, ibus, glib, gobject-introspection, gtk3, python3 +{ stdenv +, fetchurl +, gettext +, pkgconfig +, wrapGAppsHook +, anthy +, ibus +, glib +, gobject-introspection +, gtk3 +, python3 }: stdenv.mkDerivation rec { pname = "ibus-anthy"; version = "1.5.11"; - meta = with stdenv.lib; { - isIbusEngine = true; - description = "IBus interface to the anthy input method"; - homepage = https://github.com/fujiwarat/ibus-anthy; - license = licenses.gpl2Plus; - platforms = platforms.linux; - maintainers = with maintainers; [ gebner ericsagnes ]; + src = fetchurl { + url = "https://github.com/ibus/ibus-anthy/releases/download/${version}/${pname}-${version}.tar.gz"; + sha256 = "1zwgswpibh67sgbza8kvg03v06maxc08ihkgm5hmh333sjq9d5c0"; }; - configureFlags = [ "--with-anthy-zipcode=${anthy}/share/anthy/zipcode.t" ]; - buildInputs = [ - anthy glib gobject-introspection gtk3 ibus (python3.withPackages (ps: [ps.pygobject3])) + anthy + glib + gtk3 + ibus + (python3.withPackages (ps: [ + ps.pygobject3 + (ps.toPythonModule ibus) + ])) + ]; + + nativeBuildInputs = [ + gettext + gobject-introspection + pkgconfig + wrapGAppsHook ]; - nativeBuildInputs = [ intltool pkgconfig python3.pkgs.wrapPython ]; + configureFlags = [ + "--with-anthy-zipcode=${anthy}/share/anthy/zipcode.t" + ]; postFixup = '' - wrapPythonPrograms substituteInPlace $out/share/ibus/component/anthy.xml --replace \$\{exec_prefix\} $out ''; - src = fetchurl { - url = "https://github.com/ibus/ibus-anthy/releases/download/${version}/${pname}-${version}.tar.gz"; - sha256 = "1zwgswpibh67sgbza8kvg03v06maxc08ihkgm5hmh333sjq9d5c0"; + meta = with stdenv.lib; { + isIbusEngine = true; + description = "IBus interface to the anthy input method"; + homepage = https://github.com/fujiwarat/ibus-anthy; + license = licenses.gpl2Plus; + platforms = platforms.linux; + maintainers = with maintainers; [ gebner ericsagnes ]; }; } diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-hangul/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-hangul/default.nix index 0a38ccfa3bd..d5e2f50299e 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-hangul/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-hangul/default.nix @@ -1,7 +1,8 @@ { stdenv , fetchurl , substituteAll -, intltool +, appstream-glib +, gettext , pkgconfig , wrapGAppsHook , gtk3 @@ -12,11 +13,11 @@ stdenv.mkDerivation rec { pname = "ibus-hangul"; - version = "1.5.1"; + version = "1.5.3"; src = fetchurl { url = "https://github.com/choehwanjin/ibus-hangul/releases/download/${version}/${pname}-${version}.tar.gz"; - sha256 = "0gha8dfdf54rx8fv3yfikbgdg6lqq6l883lhg7q68ybvkjx9bwbs"; + sha256 = "1400ba2p34vr9q285lqvjm73f6m677cgfdymmjpiwyrjgbbiqrjy"; }; patches = [ @@ -27,9 +28,9 @@ stdenv.mkDerivation rec { ]; nativeBuildInputs = [ - intltool + appstream-glib + gettext pkgconfig - python3.pkgs.wrapPython wrapGAppsHook ]; diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix index fc4677e06b0..2c1d558f04d 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix @@ -1,33 +1,54 @@ -{ stdenv, fetchFromGitHub, autoreconfHook -, intltool, pkgconfig, sqlite, libpinyin, db -, ibus, glib, gtk3, python3 +{ stdenv +, fetchFromGitHub +, autoreconfHook +, gettext +, pkgconfig +, wrapGAppsHook +, sqlite +, libpinyin +, db +, ibus +, glib +, gtk3 +, python3 }: stdenv.mkDerivation rec { pname = "ibus-libpinyin"; - version = "1.10.0"; + version = "1.11.1"; src = fetchFromGitHub { - owner = "libpinyin"; - repo = "ibus-libpinyin"; - rev = version; - sha256 = "0zkzz6ig74nws8phqxbsggnpf5g5f2hxi0mdyn2m3s4nm14q3ma6"; + owner = "libpinyin"; + repo = "ibus-libpinyin"; + rev = version; + sha256 = "0b8rilk9zil9gvfhlk3rphcby6ph11dw66j175wp0na6h6hjlaf2"; }; - buildInputs = [ ibus glib sqlite libpinyin python3 gtk3 db ]; - nativeBuildInputs = [ autoreconfHook intltool pkgconfig python3.pkgs.wrapPython ]; + nativeBuildInputs = [ + autoreconfHook + gettext + pkgconfig + wrapGAppsHook + ]; - postAutoreconf = '' - intltoolize - ''; - - postFixup = "wrapPythonPrograms"; + buildInputs = [ + ibus + glib + sqlite + libpinyin + (python3.withPackages (pypkgs: with pypkgs; [ + pygobject3 + (toPythonModule ibus) + ])) + gtk3 + db + ]; meta = with stdenv.lib; { isIbusEngine = true; - description = "IBus interface to the libpinyin input method"; - license = licenses.gpl2; - maintainers = with maintainers; [ ericsagnes ]; - platforms = platforms.linux; + description = "IBus interface to the libpinyin input method"; + license = licenses.gpl2; + maintainers = with maintainers; [ ericsagnes ]; + platforms = platforms.linux; }; } diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-m17n/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-m17n/default.nix index 01b227f6f1b..c026a9d1a81 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-m17n/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-m17n/default.nix @@ -1,6 +1,14 @@ -{ stdenv, fetchFromGitHub -, autoreconfHook, pkgconfig -, ibus, m17n_lib, m17n_db, gettext, python3 +{ stdenv +, fetchFromGitHub +, autoreconfHook +, pkgconfig +, ibus +, gtk3 +, m17n_lib +, m17n_db +, gettext +, python3 +, wrapGAppsHook }: stdenv.mkDerivation rec { @@ -8,27 +16,40 @@ stdenv.mkDerivation rec { version = "1.4.1"; src = fetchFromGitHub { - owner = "ibus"; - repo = "ibus-m17n"; - rev = version; + owner = "ibus"; + repo = "ibus-m17n"; + rev = version; sha256 = "1xl7swqn46nhi43rka0zx666mpk667ykag3sz07x0zqrwi41frps"; }; - buildInputs = [ - ibus m17n_lib m17n_db gettext - python3 + nativeBuildInputs = [ + autoreconfHook + gettext + pkgconfig + wrapGAppsHook ]; - nativeBuildInputs = [ autoreconfHook pkgconfig python3.pkgs.wrapPython ]; + buildInputs = [ + ibus + gtk3 + m17n_lib + m17n_db + (python3.withPackages (ps: [ + ps.pygobject3 + (ps.toPythonModule ibus) + ])) + ]; - postFixup = "wrapPythonPrograms"; + configureFlags = [ + "--with-gtk=3.0" + ]; meta = with stdenv.lib; { isIbusEngine = true; - description = "m17n engine for ibus"; - homepage = https://github.com/ibus/ibus-m17n; - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = with maintainers; [ ericsagnes ]; + description = "m17n engine for ibus"; + homepage = https://github.com/ibus/ibus-m17n; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ ericsagnes ]; }; } diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-table/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-table/default.nix index 8e34cb860a6..c95a9c1651c 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-table/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-table/default.nix @@ -32,7 +32,6 @@ stdenv.mkDerivation rec { buildInputs = [ dconf gtk3 - gobject-introspection ibus (python3.withPackages (pypkgs: with pypkgs; [ pygobject3 @@ -44,7 +43,7 @@ stdenv.mkDerivation rec { autoreconfHook docbook2x pkgconfig - python3.pkgs.wrapPython + gobject-introspection wrapGAppsHook ]; diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-typing-booster/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-typing-booster/default.nix index 6980478f685..e10d6ed607a 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-typing-booster/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-typing-booster/default.nix @@ -13,13 +13,13 @@ in stdenv.mkDerivation rec { pname = "ibus-typing-booster"; - version = "2.7.0"; + version = "2.7.2"; src = fetchFromGitHub { owner = "mike-fabian"; repo = "ibus-typing-booster"; rev = version; - sha256 = "1rd9dkjc9s15mxifcbr12944rsh8z66p0j6abh3iw8vkiylk674s"; + sha256 = "1v11hipdh8chkd81gcack42v8h8q4z2x2gv2gyymqk15yj0959i3"; }; patches = [ ./hunspell-dirs.patch ]; diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/allow-wrapping.patch b/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/allow-wrapping.patch new file mode 100644 index 00000000000..434c85d3dbe --- /dev/null +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/allow-wrapping.patch @@ -0,0 +1,13 @@ +diff --git a/uniemoji.xml.in b/uniemoji.xml.in +index 5fbfd0f..6fb8ad3 100644 +--- a/uniemoji.xml.in ++++ b/uniemoji.xml.in +@@ -7,7 +7,7 @@ + <license>GPL</license> + <author>Lalo Martins <lalo.martins@gmail.com></author> + <homepage>https://github.com/salty-horse/ibus-uniemoji</homepage> +- <exec>@PYTHON@ @DATADIR@/ibus-uniemoji/uniemoji.py --ibus</exec> ++ <exec>@DATADIR@/ibus-uniemoji/uniemoji.py --ibus</exec> + <textdomain>uniemoji</textdomain> + <engines> + <engine> diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/default.nix index 107c8c60271..435d1154d4a 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-uniemoji/default.nix @@ -1,8 +1,19 @@ -{ stdenv, fetchFromGitHub -, python3Packages +{ stdenv +, fetchFromGitHub +, gobject-introspection +, wrapGAppsHook +, python3 +, ibus }: -stdenv.mkDerivation rec { +let + python = python3.withPackages (ps: with ps; [ + pygobject3 + (toPythonModule ibus) + pyxdg + python-Levenshtein + ]); +in stdenv.mkDerivation rec { pname = "ibus-uniemoji"; version = "0.6.0"; @@ -13,25 +24,39 @@ stdenv.mkDerivation rec { sha256 = "121zh3q0li1k537fcvbd4ns4jgl9bbb9gm9ihy8cfxgirv38lcfa"; }; - propagatedBuildInputs = with python3Packages; [ pyxdg python-Levenshtein pygobject3 ]; + patches = [ + # Do not run wrapper script with Python, + # the wrapped script will have Python in shebang anyway. + ./allow-wrapping.patch + ]; - nativeBuildInputs = [ python3Packages.wrapPython ]; + + nativeBuildInputs = [ + wrapGAppsHook + gobject-introspection + ]; + + buildInputs = [ + python + ibus + ]; + + makeFlags = [ + "PREFIX=${placeholder ''out''}" + "SYSCONFDIR=${placeholder ''out''}/etc" + "PYTHON=${python.interpreter}" + ]; postFixup = '' - buildPythonPath $out - patchPythonScript $out/share/ibus-uniemoji/uniemoji.py + wrapGApp $out/share/ibus-uniemoji/uniemoji.py ''; - makeFlags = [ "PREFIX=$(out)" "SYSCONFDIR=$(out)/etc" - "PYTHON=${python3Packages.python.interpreter}" - ]; - meta = with stdenv.lib; { isIbusEngine = true; - description = "Input method (ibus) for entering unicode symbols and emoji by name"; - homepage = "https://github.com/salty-horse/ibus-uniemoji"; - license = with licenses; [ gpl3 mit ]; - platforms = platforms.linux; - maintainers = with maintainers; [ aske ]; + description = "Input method (ibus) for entering unicode symbols and emoji by name"; + homepage = "https://github.com/salty-horse/ibus-uniemoji"; + license = with licenses; [ gpl3 mit ]; + platforms = platforms.linux; + maintainers = with maintainers; [ aske ]; }; } diff --git a/pkgs/tools/inputmethods/ibus/default.nix b/pkgs/tools/inputmethods/ibus/default.nix index 0dc339e51c6..4951074bc43 100644 --- a/pkgs/tools/inputmethods/ibus/default.nix +++ b/pkgs/tools/inputmethods/ibus/default.nix @@ -1,74 +1,43 @@ -{ stdenv, substituteAll, fetchurl, fetchFromGitHub, autoreconfHook, gettext, makeWrapper, pkgconfig -, vala, wrapGAppsHook, dbus, dconf ? null, glib, gdk-pixbuf, gobject-introspection, gtk2 -, gtk3, gtk-doc, isocodes, python3, json-glib, libnotify ? null, enablePython2Library ? false -, enableUI ? true, withWayland ? false, libxkbcommon ? null, wayland ? null -, buildPackages, runtimeShell }: +{ stdenv +, substituteAll +, fetchurl +, fetchFromGitHub +, autoreconfHook +, gettext +, makeWrapper +, pkgconfig +, vala +, wrapGAppsHook +, dbus +, dconf ? null +, glib +, gdk-pixbuf +, gobject-introspection +, gtk2 +, gtk3 +, gtk-doc +, isocodes +, cldr-emoji-annotation +, unicode-character-database +, unicode-emoji +, python3 +, json-glib +, libnotify ? null +, enablePython2Library ? false +, enableUI ? true +, withWayland ? false +, libxkbcommon ? null +, wayland ? null +, buildPackages +, runtimeShell +, nixosTests +}: assert withWayland -> wayland != null && libxkbcommon != null; with stdenv.lib; let - emojiSrcs = { - data = fetchurl { - url = "http://unicode.org/Public/emoji/5.0/emoji-data.txt"; - sha256 = "11jfz5rrvyc2ixliqfcjgmch4cn9mfy0x96qnpfcyz5fy1jvfyxf"; - }; - sequences = fetchurl { - url = "http://unicode.org/Public/emoji/5.0/emoji-sequences.txt"; - sha256 = "09bii7f5mmladg0kl3n80fa9qaix6bv5ylm92x52j7wygzv0szb1"; - }; - variation-sequences = fetchurl { - url = "http://unicode.org/Public/emoji/5.0/emoji-variation-sequences.txt"; - sha256 = "1wlg4gbq7spmpppjfy5zdl82sj0hc836p8gljgfrjmwsjgybq286"; - }; - zwj-sequences = fetchurl { - url = "http://unicode.org/Public/emoji/5.0/emoji-zwj-sequences.txt"; - sha256 = "16gvzv76mjv9g81lm1m6cr3rpfqyn2k4hb9a62xd329252dhl25q"; - }; - test = fetchurl { - url = "http://unicode.org/Public/emoji/5.0/emoji-test.txt"; - sha256 = "031qk2v8xdnba7hfinmgrmpglc9l8ll2hds6mw885p0hngdb3dgw"; - }; - }; - emojiData = stdenv.mkDerivation { - name = "emoji-data-5.0"; - dontUnpack = true; - installPhase = '' - mkdir $out - ${builtins.toString (flip mapAttrsToList emojiSrcs (k: v: "cp ${v} $out/emoji-${k}.txt;"))} - ''; - }; - cldrEmojiAnnotation = stdenv.mkDerivation rec { - pname = "cldr-emoji-annotation"; - version = "31.90.0_1"; - src = fetchFromGitHub { - owner = "fujiwarat"; - repo = "cldr-emoji-annotation"; - rev = version; - sha256 = "1vsj32bg8ab4d80rz0fxy6sj2lv31inzyjnddjm079bnvlaf2kih"; - }; - nativeBuildInputs = [ autoreconfHook ]; - }; - ucdVersion = "12.0.0"; - ucdSrcs = { - NamesList = fetchurl { - url = "https://www.unicode.org/Public/${ucdVersion}/ucd/NamesList.txt"; - sha256 = "c17c7726f562bd9ef869096807f0297e1edef9a58fdae1fbae487378fa43586f"; - }; - Blocks = fetchurl { - url = "https://www.unicode.org/Public/${ucdVersion}/ucd/Blocks.txt"; - sha256 = "a1a3ca4381eb91f7b65afe7cb7df615cdcf67993fef4b486585f66b349993a10"; - }; - }; - ucd = stdenv.mkDerivation { - name = "ucd-${ucdVersion}"; - dontUnpack = true; - installPhase = '' - mkdir $out - ${builtins.toString (flip mapAttrsToList ucdSrcs (k: v: "cp ${v} $out/${k}.txt;"))} - ''; - }; python3Runtime = python3.withPackages (ps: with ps; [ pygobject3 ]); python3BuildEnv = python3.buildEnv.override { # ImportError: No module named site @@ -82,13 +51,13 @@ in stdenv.mkDerivation rec { pname = "ibus"; - version = "1.5.20"; + version = "1.5.21"; src = fetchFromGitHub { owner = "ibus"; repo = "ibus"; rev = version; - sha256 = "1npavb896qrp6qbqayb0va4mpsi68wybcnlbjknzgssqyw2ylh9r"; + sha256 = "0fjbqj7d2g5c8i1wdggzhz269xisxv4xb1pa9swalm5p2b2vrjlx"; }; patches = [ @@ -99,7 +68,7 @@ stdenv.mkDerivation rec { }) ]; - outputs = [ "out" "dev" ]; + outputs = [ "out" "dev" "installedTests" ]; postPatch = '' echo \#!${runtimeShell} > data/dconf/make-dconf-override-db.sh @@ -116,9 +85,15 @@ stdenv.mkDerivation rec { (enableFeature enablePython2Library "python-library") (enableFeature enablePython2Library "python2") # XXX: python2 library does not work anyway (enableFeature enableUI "ui") - "--with-unicode-emoji-dir=${emojiData}" - "--with-emoji-annotation-dir=${cldrEmojiAnnotation}/share/unicode/cldr/common/annotations" - "--with-ucd-dir=${ucd}" + "--enable-install-tests" + "--with-unicode-emoji-dir=${unicode-emoji}/share/unicode/emoji" + "--with-emoji-annotation-dir=${cldr-emoji-annotation}/share/unicode/cldr/common/annotations" + "--with-ucd-dir=${unicode-character-database}/share/unicode" + ]; + + makeFlags = [ + "test_execsdir=${placeholder ''installedTests''}/libexec/installed-tests/ibus" + "test_sourcesdir=${placeholder ''installedTests''}/share/installed-tests/ibus" ]; nativeBuildInputs = [ @@ -132,7 +107,9 @@ stdenv.mkDerivation rec { wrapGAppsHook ]; - propagatedBuildInputs = [ glib ]; + propagatedBuildInputs = [ + glib + ]; buildInputs = [ dbus @@ -154,10 +131,31 @@ stdenv.mkDerivation rec { doCheck = false; # requires X11 daemon doInstallCheck = true; - installCheckPhase = "$out/bin/ibus version"; + installCheckPhase = '' + $out/bin/ibus version + ''; + + postInstall = '' + # It has some hardcoded FHS paths and also we do not use it + # since we set up the environment in NixOS tests anyway. + moveToOutput "bin/ibus-desktop-testing-runner" "$installedTests" + ''; + + postFixup = '' + # set necessary environment also for tests + for f in $installedTests/libexec/installed-tests/ibus/*; do + wrapGApp $f + done + ''; + + passthru = { + tests = { + installed-tests = nixosTests.installed-tests.ibus; + }; + }; meta = { - homepage = https://github.com/ibus/ibus; + homepage = "https://github.com/ibus/ibus"; description = "Intelligent Input Bus, input method framework"; license = licenses.lgpl21Plus; platforms = platforms.linux; diff --git a/pkgs/tools/inputmethods/ibus/fix-paths.patch b/pkgs/tools/inputmethods/ibus/fix-paths.patch index 192aa7d6395..60269c6c241 100644 --- a/pkgs/tools/inputmethods/ibus/fix-paths.patch +++ b/pkgs/tools/inputmethods/ibus/fix-paths.patch @@ -40,6 +40,6 @@ export IBUS_DATAROOTDIR=@datarootdir@ export IBUS_LOCALEDIR=@localedir@ export IBUS_LIBEXECDIR=${libexecdir} --exec @PYTHON@ @prefix@/share/ibus/setup/main.py $@ +-exec ${PYTHON:-@PYTHON@} @prefix@/share/ibus/setup/main.py $@ +exec @pythonInterpreter@ @prefix@/share/ibus/setup/main.py $@ diff --git a/pkgs/tools/misc/arp-scan/default.nix b/pkgs/tools/misc/arp-scan/default.nix index 4f50e0f556b..9a3164db5d7 100644 --- a/pkgs/tools/misc/arp-scan/default.nix +++ b/pkgs/tools/misc/arp-scan/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "arp-scan"; - version = "1.9.5"; + version = "1.9.7"; src = fetchFromGitHub { owner = "royhills"; repo = "arp-scan"; - rev = "4de863c2627a05177eda7159692a588f9f520cd1"; - sha256 = "15zpfdybk2kh98shqs8qqd0f9nyi2ch2wcyv729rfj7yp0hif5mb"; + rev = version; + sha256 = "1mf7a4f9vzvnkiavc87aqyciswggsb4fpy7j05jxnvjyyxv3l7gp"; }; perlModules = with perlPackages; [ @@ -19,11 +19,11 @@ stdenv.mkDerivation rec { ]; nativeBuildInputs = [ autoreconfHook ]; - buildInputs = [ libpcap makeWrapper ]; + buildInputs = [ perlPackages.perl libpcap makeWrapper ]; postInstall = '' for name in get-{oui,iab}; do - wrapProgram "$out/bin/$name" --set PERL5LIB "${perlPackages.makePerlPath perlModules }" + wrapProgram "$out/bin/$name" --set PERL5LIB "${perlPackages.makeFullPerlPath perlModules}" done; ''; @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { Arp-scan is a command-line tool that uses the ARP protocol to discover and fingerprint IP hosts on the local network. ''; - homepage = http://www.nta-monitor.com/wiki/index.php/Arp-scan_Documentation; + homepage = "http://www.nta-monitor.com/wiki/index.php/Arp-scan_Documentation"; license = licenses.gpl3; platforms = platforms.linux; maintainers = with maintainers; [ bjornfor mikoim ]; diff --git a/pkgs/tools/misc/birdfont/xmlbird.nix b/pkgs/tools/misc/birdfont/xmlbird.nix index a5581c84d50..3d51f282dae 100644 --- a/pkgs/tools/misc/birdfont/xmlbird.nix +++ b/pkgs/tools/misc/birdfont/xmlbird.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "xmlbird"; - version = "1.2.10"; + version = "1.2.11"; src = fetchurl { url = "https://birdfont.org/${pname}-releases/lib${pname}-${version}.tar.xz"; - sha256 = "0qpqpqqd4wj711jzczfsr38fgcz1rzxchrqbssxnan659ycd9c78"; + sha256 = "1ycbgjvywnlc0garw8qjqd18s0xnrwjvssdrb410yschv3wjq1i0"; }; nativeBuildInputs = [ python3 pkgconfig vala gobject-introspection ]; diff --git a/pkgs/tools/misc/byobu/default.nix b/pkgs/tools/misc/byobu/default.nix index 65196e2a3b6..94db365f6d6 100644 --- a/pkgs/tools/misc/byobu/default.nix +++ b/pkgs/tools/misc/byobu/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, python3, perl, textual-window-manager }: stdenv.mkDerivation rec { - version = "5.129"; + version = "5.130"; name = "byobu-" + version; src = fetchurl { url = "https://launchpad.net/byobu/trunk/${version}/+download/byobu_${version}.orig.tar.gz"; - sha256 = "1ff20xdi58pncw76hrkf7azqy0y654kwz1zff5irnd8cflh5y4z5"; + sha256 = "0qblw5vz90fixvpwfvlc8bkljsviri5gj77cp63l44ns3lb19r27"; }; doCheck = true; diff --git a/pkgs/tools/misc/chezmoi/default.nix b/pkgs/tools/misc/chezmoi/default.nix index 660dcf34459..897ecadd872 100644 --- a/pkgs/tools/misc/chezmoi/default.nix +++ b/pkgs/tools/misc/chezmoi/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "chezmoi"; - version = "1.7.5"; + version = "1.7.7"; src = fetchFromGitHub { owner = "twpayne"; repo = "chezmoi"; rev = "v${version}"; - sha256 = "1s64468q7hhp42lzgcixhh3jq7i7bgmiakahyfj0mzc49mn6rr0a"; + sha256 = "18v3sgi0aa8cd9sk3nhhyc4dmzpmq28wa21zyc9nvyw40ngmmxsb"; }; modSha256 = "0c2jslcigq9ajchfr7inb7b6cpla7xjibcmjsvwspfzknrlrsbfn"; diff --git a/pkgs/tools/misc/debianutils/default.nix b/pkgs/tools/misc/debianutils/default.nix index b42c302a38f..b924d5a74ea 100644 --- a/pkgs/tools/misc/debianutils/default.nix +++ b/pkgs/tools/misc/debianutils/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "debianutils"; - version = "4.8.6.3"; + version = "4.9"; src = fetchurl { url = "mirror://debian/pool/main/d/${pname}/${pname}_${version}.tar.xz"; - sha256 = "08g2gdm6n66w5m8qwm4f48wzgs3ymkpki6dg01nwzwbdzhxdxirc"; + sha256 = "0gq7m2glwdhai93ms2qlnqjlynczzncxsddcq8l5yc6bp1f5r5r0"; }; meta = with stdenv.lib; { @@ -20,5 +20,6 @@ stdenv.mkDerivation rec { license = with licenses; [ gpl2Plus publicDomain smail ]; maintainers = []; platforms = platforms.all; + broken = stdenv.isDarwin; }; } diff --git a/pkgs/tools/misc/dust/default.nix b/pkgs/tools/misc/dust/default.nix index 68f06f1ceb8..4239b54f18e 100644 --- a/pkgs/tools/misc/dust/default.nix +++ b/pkgs/tools/misc/dust/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "dust"; - version = "0.4.1.2"; + version = "0.4.2"; src = fetchFromGitHub { owner = "bootandy"; repo = "dust"; rev = "v${version}"; - sha256 = "0a2n96p6z4y09l5z617qbpm8lgxvfagd1l950d2gz9xw4xf1ik5w"; + sha256 = "0z1vi5agaf1gcq1bdzgfc89v6vpk9kaxxy8f3rd2h6yzdrd2dhk7"; }; - cargoSha256 = "0cpgxkgz10na90r3fgz8hs20vihqdcc8983inn71fq90627bhdx7"; + cargoSha256 = "08c428rrana0llzhkg8ngzqs6vc773jrf4wql2qxdvm4l0nsx596"; doCheck = false; diff --git a/pkgs/tools/misc/etcher/default.nix b/pkgs/tools/misc/etcher/default.nix new file mode 100644 index 00000000000..4944600108a --- /dev/null +++ b/pkgs/tools/misc/etcher/default.nix @@ -0,0 +1,94 @@ +{ lib +, stdenv +, fetchurl +, gcc-unwrapped +, dpkg +, polkit +, bash +, nodePackages +, electron_3 +, gtk3 +, wrapGAppsHook +}: + +let + libPath = lib.makeLibraryPath [ + # for libstdc++.so.6 + gcc-unwrapped.lib + ]; + + sha256 = { + "x86_64-linux" = "0zb9j34dz7ybjix018bm8g0b6kilw9300q4ahcm22p0ggg528dh7"; + "i686-linux" = "0wsv4mvwrvsaz1pwiqs94b3854h5l8ff2dbb1ybxmvwjbfrkdcqc"; + }."${stdenv.system}"; + + arch = { + "x86_64-linux" = "amd64"; + "i686-linux" = "i386"; + }."${stdenv.system}"; + +in stdenv.mkDerivation rec { + pname = "etcher"; + version = "1.5.60"; + + src = fetchurl { + url = "https://github.com/balena-io/etcher/releases/download/v${version}/balena-etcher-electron_${version}_${arch}.deb"; + inherit sha256; + }; + + buildInputs = [ + gtk3 + ]; + + nativeBuildInputs = [ + wrapGAppsHook + ]; + + dontBuild = true; + dontConfigure = true; + + unpackPhase = '' + ${dpkg}/bin/dpkg-deb -x $src . + ''; + + # sudo-prompt has hardcoded binary paths on Linux and we patch them here + # along with some other paths + patchPhase = '' + ${nodePackages.asar}/bin/asar extract opt/balenaEtcher/resources/app.asar tmp + # Use Nix(OS) paths + sed -i "s|/usr/bin/pkexec|/usr/bin/pkexec', '/run/wrappers/bin/pkexec|" tmp/node_modules/sudo-prompt/index.js + sed -i 's|/bin/bash|${bash}/bin/bash|' tmp/node_modules/sudo-prompt/index.js + sed -i "s|process.resourcesPath|'$out/opt/balenaEtcher/resources/'|" tmp/generated/gui.js + ${nodePackages.asar}/bin/asar pack tmp opt/balenaEtcher/resources/app.asar + rm -rf tmp + # Fix up .desktop file + substituteInPlace usr/share/applications/balena-etcher-electron.desktop \ + --replace "/opt/balenaEtcher/balena-etcher-electron" "$out/bin/balena-etcher-electron" + ''; + + installPhase = '' + mkdir -p $out/bin + cp -r opt $out/ + cp -r usr/share $out/ + + # We'll use our Nixpkgs electron_3 instead + rm $out/opt/balenaEtcher/balena-etcher-electron + + ln -s ${electron_3}/bin/electron $out/bin/balena-etcher-electron + ''; + + preFixup = '' + gappsWrapperArgs+=( + --add-flags $out/opt/balenaEtcher/resources/app.asar + --prefix LD_LIBRARY_PATH : ${libPath} + ) + ''; + + meta = with stdenv.lib; { + description = "Flash OS images to SD cards and USB drives, safely and easily"; + homepage = "https://etcher.io/"; + license = licenses.asl20; + maintainers = [ maintainers.shou ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; +} diff --git a/pkgs/tools/misc/eva/Cargo.lock.patch b/pkgs/tools/misc/eva/Cargo.lock.patch index c9fea04c75d..67553f0d6d8 100644 --- a/pkgs/tools/misc/eva/Cargo.lock.patch +++ b/pkgs/tools/misc/eva/Cargo.lock.patch @@ -1,12 +1,20 @@ diff --git a/Cargo.lock b/Cargo.lock new file mode 100644 -index 00000000000..630f81eae76 +index 0000000..ac198e7 --- /dev/null -+++ b/pkgs/tools/misc/eva/Cargo.lock -@@ -0,0 +1,448 @@ ++++ b/Cargo.lock +@@ -0,0 +1,583 @@ +# This file is automatically @generated by Cargo. +# It is not intended for manual editing. +[[package]] ++name = "aho-corasick" ++version = "0.7.6" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "memchr 2.2.1 (registry+https://github.com/rust-lang/crates.io-index)", ++] ++ ++[[package]] +name = "ansi_term" +version = "0.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" @@ -21,29 +29,31 @@ index 00000000000..630f81eae76 + +[[package]] +name = "arrayvec" -+version = "0.4.12" ++version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" -+dependencies = [ -+ "nodrop 0.1.14 (registry+https://github.com/rust-lang/crates.io-index)", -+] + +[[package]] +name = "atty" +version = "0.2.13" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", + "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] ++name = "autocfg" ++version = "0.1.7" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++ ++[[package]] +name = "backtrace" +version = "0.3.40" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "backtrace-sys 0.1.32 (registry+https://github.com/rust-lang/crates.io-index)", + "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", + "rustc-demangle 0.1.16 (registry+https://github.com/rust-lang/crates.io-index)", +] + @@ -52,8 +62,8 @@ index 00000000000..630f81eae76 +version = "0.1.32" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ -+ "cc 1.0.46 (registry+https://github.com/rust-lang/crates.io-index)", -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "cc 1.0.48 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] @@ -71,11 +81,11 @@ index 00000000000..630f81eae76 + +[[package]] +name = "blake2b_simd" -+version = "0.5.8" ++version = "0.5.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "arrayref 0.3.5 (registry+https://github.com/rust-lang/crates.io-index)", -+ "arrayvec 0.4.12 (registry+https://github.com/rust-lang/crates.io-index)", ++ "arrayvec 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)", + "constant_time_eq 0.1.4 (registry+https://github.com/rust-lang/crates.io-index)", +] + @@ -86,7 +96,7 @@ index 00000000000..630f81eae76 + +[[package]] +name = "cc" -+version = "1.0.46" ++version = "1.0.48" +source = "registry+https://github.com/rust-lang/crates.io-index" + +[[package]] @@ -131,22 +141,45 @@ index 00000000000..630f81eae76 +] + +[[package]] ++name = "directories" ++version = "2.0.2" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", ++ "dirs-sys 0.3.4 (registry+https://github.com/rust-lang/crates.io-index)", ++] ++ ++[[package]] +name = "dirs" +version = "1.0.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", ++ "redox_users 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", ++] ++ ++[[package]] ++name = "dirs-sys" ++version = "0.3.4" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", + "redox_users 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)", + "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] +name = "eva" -+version = "0.2.4" ++version = "0.2.7" +dependencies = [ + "clap 2.33.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "directories 2.0.2 (registry+https://github.com/rust-lang/crates.io-index)", + "lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)", + "radix_fmt 1.0.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "regex 1.3.1 (registry+https://github.com/rust-lang/crates.io-index)", + "rustyline 4.1.0 (registry+https://github.com/rust-lang/crates.io-index)", +] + @@ -166,8 +199,8 @@ index 00000000000..630f81eae76 +dependencies = [ + "proc-macro2 1.0.6 (registry+https://github.com/rust-lang/crates.io-index)", + "quote 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)", -+ "syn 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)", -+ "synstructure 0.12.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "syn 1.0.11 (registry+https://github.com/rust-lang/crates.io-index)", ++ "synstructure 0.12.3 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] @@ -182,7 +215,7 @@ index 00000000000..630f81eae76 + +[[package]] +name = "libc" -+version = "0.2.65" ++version = "0.2.66" +source = "registry+https://github.com/rust-lang/crates.io-index" + +[[package]] @@ -204,16 +237,81 @@ index 00000000000..630f81eae76 +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "bitflags 1.2.1 (registry+https://github.com/rust-lang/crates.io-index)", -+ "cc 1.0.46 (registry+https://github.com/rust-lang/crates.io-index)", ++ "cc 1.0.48 (registry+https://github.com/rust-lang/crates.io-index)", + "cfg-if 0.1.10 (registry+https://github.com/rust-lang/crates.io-index)", -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", + "void 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)", +] + +[[package]] -+name = "nodrop" -+version = "0.1.14" ++name = "num" ++version = "0.2.0" +source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "num-bigint 0.2.3 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-complex 0.2.3 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-integer 0.1.41 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-iter 0.1.39 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-rational 0.2.2 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-traits 0.2.10 (registry+https://github.com/rust-lang/crates.io-index)", ++] ++ ++[[package]] ++name = "num-bigint" ++version = "0.2.3" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "autocfg 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", ++ "num-integer 0.1.41 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(registry+https://github.com/rust-lang/crates.io-index)", + "fuchsia-cprng 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)", -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)", + "rand_core 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)", + "rdrand 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)", + "winapi 0.3.8 (registry+https://github.com/rust-lang/crates.io-index)", @@ -287,12 +385,28 @@ index 00000000000..630f81eae76 +] + +[[package]] ++name = "regex" ++version = "1.3.1" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++dependencies = [ ++ "aho-corasick 0.7.6 (registry+https://github.com/rust-lang/crates.io-index)", ++ "memchr 2.2.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "regex-syntax 0.6.12 (registry+https://github.com/rust-lang/crates.io-index)", ++ "thread_local 0.3.6 (registry+https://github.com/rust-lang/crates.io-index)", ++] ++ ++[[package]] ++name = "regex-syntax" ++version = "0.6.12" ++source = "registry+https://github.com/rust-lang/crates.io-index" ++ ++[[package]] +name = "rust-argon2" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "base64 0.10.1 (registry+https://github.com/rust-lang/crates.io-index)", -+ "blake2b_simd 0.5.8 (registry+https://github.com/rust-lang/crates.io-index)", ++ "blake2b_simd 0.5.9 (registry+https://github.com/rust-lang/crates.io-index)", + "crossbeam-utils 0.6.6 (registry+https://github.com/rust-lang/crates.io-index)", +] + @@ -307,11 +421,11 @@ index 00000000000..630f81eae76 +source = "registry+https://github.com/rust-lang/crates.io-index" +dependencies = [ + "dirs 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)", -+ "libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libc 0.2.66 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(registry+https://github.com/rust-lang/crates.io-index)" = "ddfc5b9aa5d4507acaf872de71051dfd0e309860e88966e1051e462a077aac4f" +"checksum constant_time_eq 0.1.4 (registry+https://github.com/rust-lang/crates.io-index)" = "995a44c877f9212528ccc74b21a232f66ad69001e40ede5bcee2ac9ef2657120" +"checksum crossbeam-utils 0.6.6 (registry+https://github.com/rust-lang/crates.io-index)" = "04973fa96e96579258a5091af6003abde64af786b860f18622b82e026cca60e6" ++"checksum directories 2.0.2 (registry+https://github.com/rust-lang/crates.io-index)" = "551a778172a450d7fc12e629ca3b0428d00f6afa9a43da1b630d54604e97371c" +"checksum dirs 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)" = "3fd78930633bd1c6e35c4b42b1df7b0cbc6bc191146e512bb3bedf243fcc3901" ++"checksum dirs-sys 0.3.4 (registry+https://github.com/rust-lang/crates.io-index)" = "afa0b23de8fd801745c471deffa6e12d248f962c9fd4b4c33787b055599bde7b" +"checksum failure 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)" = "f8273f13c977665c5db7eb2b99ae520952fe5ac831ae4cd09d80c4c7042b5ed9" +"checksum failure_derive 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)" = "0bc225b78e0391e4b8683440bf2e63c2deeeb2ce5189eab46e2b68c6d3725d08" +"checksum fuchsia-cprng 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)" = "a06f77d526c1a601b7c4cdd98f54b5eaabffc14d5f2f0296febdc7f357c6d3ba" +"checksum lazy_static 1.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "e2abad23fbc42b3700f2f279844dc832adb2b2eb069b2df918f455c4e18cc646" -+"checksum libc 0.2.65 (registry+https://github.com/rust-lang/crates.io-index)" = "1a31a0627fdf1f6a39ec0dd577e101440b7db22672c0901fe00a9a6fbb5c24e8" ++"checksum libc 0.2.66 (registry+https://github.com/rust-lang/crates.io-index)" = "d515b1f41455adea1313a4a2ac8a8a477634fbae63cc6100e3aebb207ce61558" +"checksum log 0.4.8 (registry+https://github.com/rust-lang/crates.io-index)" = "14b6052be84e6b71ab17edffc2eeabf5c2c3ae1fdb464aae35ac50c67a44e1f7" +"checksum memchr 2.2.1 (registry+https://github.com/rust-lang/crates.io-index)" = "88579771288728879b57485cc7d6b07d648c9f0141eb955f8ab7f9d45394468e" +"checksum nix 0.13.1 (registry+https://github.com/rust-lang/crates.io-index)" = "4dbdc256eaac2e3bd236d93ad999d3479ef775c863dbda3068c4006a92eec51b" -+"checksum nodrop 0.1.14 (registry+https://github.com/rust-lang/crates.io-index)" = "72ef4a56884ca558e5ddb05a1d1e7e1bfd9a68d9ed024c21704cc98872dae1bb" ++"checksum num 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)" = "cf4825417e1e1406b3782a8ce92f4d53f26ec055e3622e1881ca8e9f5f9e08db" ++"checksum num-bigint 0.2.3 (registry+https://github.com/rust-lang/crates.io-index)" = "f9c3f34cdd24f334cb265d9bf8bfa8a241920d026916785747a92f0e55541a1a" ++"checksum num-complex 0.2.3 (registry+https://github.com/rust-lang/crates.io-index)" = "fcb0cf31fb3ff77e6d2a6ebd6800df7fdcd106f2ad89113c9130bcd07f93dffc" ++"checksum num-integer 0.1.41 (registry+https://github.com/rust-lang/crates.io-index)" = "b85e541ef8255f6cf42bbfe4ef361305c6c135d10919ecc26126c4e5ae94bc09" ++"checksum num-iter 0.1.39 (registry+https://github.com/rust-lang/crates.io-index)" = "76bd5272412d173d6bf9afdf98db8612bbabc9a7a830b7bfc9c188911716132e" ++"checksum num-rational 0.2.2 (registry+https://github.com/rust-lang/crates.io-index)" = "f2885278d5fe2adc2f75ced642d52d879bffaceb5a2e0b1d4309ffdfb239b454" ++"checksum num-traits 0.2.10 (registry+https://github.com/rust-lang/crates.io-index)" = "d4c81ffc11c212fa327657cb19dd85eb7419e163b5b076bede2bdb5c974c07e4" +"checksum proc-macro2 1.0.6 (registry+https://github.com/rust-lang/crates.io-index)" = "9c9e470a8dc4aeae2dee2f335e8f533e2d4b347e1434e5671afc49b054592f27" +"checksum quote 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)" = "053a8c8bcc71fcce321828dc897a98ab9760bef03a4fc36693c231e5b3216cfe" +"checksum radix_fmt 1.0.0 (registry+https://github.com/rust-lang/crates.io-index)" = "ce082a9940a7ace2ad4a8b7d0b1eac6aa378895f18be598230c5f2284ac05426" @@ -436,14 +568,17 @@ index 00000000000..630f81eae76 +"checksum rdrand 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "678054eb77286b51581ba43620cc911abf02758c91f93f479767aed0f90458b2" +"checksum redox_syscall 0.1.56 (registry+https://github.com/rust-lang/crates.io-index)" = "2439c63f3f6139d1b57529d16bc3b8bb855230c8efcc5d3a896c8bea7c3b1e84" +"checksum redox_users 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)" = "4ecedbca3bf205f8d8f5c2b44d83cd0690e39ee84b951ed649e9f1841132b66d" ++"checksum regex 1.3.1 (registry+https://github.com/rust-lang/crates.io-index)" = "dc220bd33bdce8f093101afe22a037b8eb0e5af33592e6a9caafff0d4cb81cbd" ++"checksum regex-syntax 0.6.12 (registry+https://github.com/rust-lang/crates.io-index)" = "11a7e20d1cce64ef2fed88b66d347f88bd9babb82845b2b858f3edbf59a4f716" +"checksum rust-argon2 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)" = "4ca4eaef519b494d1f2848fc602d18816fed808a981aedf4f1f00ceb7c9d32cf" +"checksum rustc-demangle 0.1.16 (registry+https://github.com/rust-lang/crates.io-index)" = "4c691c0e608126e00913e33f0ccf3727d5fc84573623b8d65b2df340b5201783" +"checksum rustyline 4.1.0 (registry+https://github.com/rust-lang/crates.io-index)" = "0f47ea1ceb347d2deae482d655dc8eef4bd82363d3329baffa3818bd76fea48b" +"checksum strsim 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)" = "8ea5119cdb4c55b55d432abb513a0429384878c15dde60cc77b1c99de1a95a6a" -+"checksum syn 1.0.5 (registry+https://github.com/rust-lang/crates.io-index)" = "66850e97125af79138385e9b88339cbcd037e3f28ceab8c5ad98e64f0f1f80bf" -+"checksum synstructure 0.12.1 (registry+https://github.com/rust-lang/crates.io-index)" = "3f085a5855930c0441ca1288cf044ea4aecf4f43a91668abdb870b4ba546a203" ++"checksum syn 1.0.11 (registry+https://github.com/rust-lang/crates.io-index)" = "dff0acdb207ae2fe6d5976617f887eb1e35a2ba52c13c7234c790960cdad9238" ++"checksum synstructure 0.12.3 (registry+https://github.com/rust-lang/crates.io-index)" = "67656ea1dc1b41b1451851562ea232ec2e5a80242139f7e679ceccfb5d61f545" +"checksum textwrap 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)" = "d326610f408c7a4eb6f51c37c330e496b08506c9457c9d34287ecc38809fb060" -+"checksum unicode-segmentation 1.3.0 (registry+https://github.com/rust-lang/crates.io-index)" = "1967f4cdfc355b37fd76d2a954fb2ed3871034eb4f26d60537d88795cfc332a9" ++"checksum thread_local 0.3.6 (registry+https://github.com/rust-lang/crates.io-index)" = "c6b53e329000edc2b34dbe8545fd20e55a333362d0a321909685a19bd28c3f1b" ++"checksum unicode-segmentation 1.6.0 (registry+https://github.com/rust-lang/crates.io-index)" = "e83e153d1053cbb5a118eeff7fd5be06ed99153f00dbcd8ae310c5fb2b22edc0" +"checksum unicode-width 0.1.6 (registry+https://github.com/rust-lang/crates.io-index)" = "7007dbd421b92cc6e28410fe7362e2e0a2503394908f417b68ec8d1c364c4e20" +"checksum unicode-xid 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)" = "826e7639553986605ec5979c7dd957c7895e93eabed50ab2ffa7f6128a75097c" +"checksum utf8parse 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)" = "8772a4ccbb4e89959023bc5b7cb8623a795caa7092d99f3aa9501b9484d4557d" diff --git a/pkgs/tools/misc/eva/default.nix b/pkgs/tools/misc/eva/default.nix index 0efaf008d48..bf43d11e566 100644 --- a/pkgs/tools/misc/eva/default.nix +++ b/pkgs/tools/misc/eva/default.nix @@ -1,24 +1,32 @@ -{ stdenv, fetchFromGitHub, rustPlatform }: +{ stdenv, fetchFromGitHub, rustPlatform, fetchpatch }: rustPlatform.buildRustPackage rec { pname = "eva"; - version = "0.2.5"; + version = "0.2.7"; - cargoSha256 = "1zns4xspw9w1f84sf8cz30mp2fl1jyjc2ca09gkqhzhgaj055y7k"; + cargoSha256 = "0n3xvlmp4l925nbz8lx6dr9yrrfh6z7b9z8wd6sli3a1dq26d6bg"; src = fetchFromGitHub { owner = "NerdyPepper"; repo = "${pname}"; - rev = "v${version}"; - sha256 = "1vqr6z4vicqx1lm5ll09za4jh8rki2qbav1pawz15hqqzps3y8h1"; + rev = "6ce0fc0212a34ffb647b24d9d903029ac4518165"; + sha256 = "10242vnq2ph0g3p2hdacs4lmx3f474xm04nadplxbpv9xh4nbag3"; }; cargoPatches = [ ./Cargo.lock.patch ]; + patches = [ + # to fix the test suite (can be removed as soon as #33 is merged). + (fetchpatch { + url = https://github.com/NerdyPepper/eva/commit/cacf51dbb9748b1dbe97b35f3c593a0a272bd4db.patch; + sha256 = "11q7dkz2x1888f3awnlr1nbbxzzfjrr46kd0kk6sgjdkyfh50cvv"; + }) + ]; + meta = with stdenv.lib; { description = "A calculator REPL, similar to bc"; homepage = https://github.com/NerdyPepper/eva; license = licenses.mit; - maintainers = with maintainers; [ nrdxp ]; + maintainers = with maintainers; [ nrdxp ma27 ]; }; } diff --git a/pkgs/tools/misc/exa/default.nix b/pkgs/tools/misc/exa/default.nix index e05963b6902..0edd8a1b318 100644 --- a/pkgs/tools/misc/exa/default.nix +++ b/pkgs/tools/misc/exa/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, rustPlatform, cmake, perl, pkgconfig, zlib +{ stdenv, fetchFromGitHub, fetchpatch, rustPlatform, cmake, perl, pkgconfig, zlib , darwin, libiconv, installShellFiles }: @@ -17,6 +17,15 @@ buildRustPackage rec { sha256 = "14qlm9zb9v22hxbbi833xaq2b7qsxnmh15s317200vz5f1305hhw"; }; + patches = [ + (fetchpatch { + # https://github.com/ogham/exa/pull/584 + name = "fix-panic-on-broken-symlink-in-git-repository.patch"; + url = "https://github.com/ogham/exa/pull/584/commits/a7a8e99cf3a15992afb2383435da0231917ffb54.patch"; + sha256 = "0n5q483sz300jkp0sbb350hdinmkw7s6bmigdyr6ypz3fvygd9hx"; + }) + ]; + nativeBuildInputs = [ cmake pkgconfig perl installShellFiles ]; buildInputs = [ zlib ] ++ stdenv.lib.optionals stdenv.isDarwin [ diff --git a/pkgs/tools/misc/ffsend/default.nix b/pkgs/tools/misc/ffsend/default.nix index ff21d701d80..d0c389f31f9 100644 --- a/pkgs/tools/misc/ffsend/default.nix +++ b/pkgs/tools/misc/ffsend/default.nix @@ -16,16 +16,16 @@ with rustPlatform; buildRustPackage rec { pname = "ffsend"; - version = "0.2.56"; + version = "0.2.57"; src = fetchFromGitLab { owner = "timvisee"; repo = "ffsend"; rev = "v${version}"; - sha256 = "12ymy2f7nd7w4qm1w8kd6p5dk8prnzsmynmh434x0pzh3cg4fhji"; + sha256 = "04y3mnh77g8mvcikp3m0a20vz180fzv847z8xjnz97ynhrbp3q94"; }; - cargoSha256 = "08xqvrsyxy131702d6l6klznp6vijik910k65k6sgxqdw6r7ah9a"; + cargoSha256 = "19w1lwvp54fjl1ll5pay5grfgj4zs2idqiqppxhksf61az6knql9"; nativeBuildInputs = [ cmake pkgconfig installShellFiles ]; buildInputs = [ openssl ] @@ -55,7 +55,7 @@ buildRustPackage rec { ''; homepage = https://gitlab.com/timvisee/ffsend; license = licenses.gpl3; - maintainers = [ maintainers.lilyball maintainers.equirosa]; + maintainers = with maintainers; [ lilyball equirosa ]; platforms = platforms.unix; }; } diff --git a/pkgs/tools/misc/fluent-bit/default.nix b/pkgs/tools/misc/fluent-bit/default.nix index fe68613b542..516badb7bc7 100644 --- a/pkgs/tools/misc/fluent-bit/default.nix +++ b/pkgs/tools/misc/fluent-bit/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "fluent-bit"; - version = "1.3.2"; + version = "1.3.5"; src = fetchFromGitHub { owner = "fluent"; repo = "fluent-bit"; rev = "v${version}"; - sha256 = "155szha6mx7cvq0bzqb528zg4q1m9gip7f0m1zv9yrz1sr9p1nzv"; + sha256 = "0xwh8fnvahcyygz0ydi4pdzgsyvjaphwl3f2ccdas52fbirwnicn"; }; nativeBuildInputs = [ cmake flex bison ]; diff --git a/pkgs/tools/misc/fwup/default.nix b/pkgs/tools/misc/fwup/default.nix index a189e8c1dba..87702586a38 100644 --- a/pkgs/tools/misc/fwup/default.nix +++ b/pkgs/tools/misc/fwup/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "fwup"; - version = "1.3.1"; + version = "1.5.0"; src = fetchFromGitHub { owner = "fhunleth"; repo = "fwup"; rev = "v${version}"; - sha256 = "058llxr8hbdjl721g76icm0gr50bglcgazwrbp3dxyd9jaa0bzc7"; + sha256 = "11jh6pqzgcvzg5i0zhhlc3v4yc2x9bnmd9g8sqzb666jwz3yn7x3"; }; doCheck = true; diff --git a/pkgs/tools/misc/html-proofer/Gemfile.lock b/pkgs/tools/misc/html-proofer/Gemfile.lock index ac229cf4657..ec69f523f3b 100644 --- a/pkgs/tools/misc/html-proofer/Gemfile.lock +++ b/pkgs/tools/misc/html-proofer/Gemfile.lock @@ -5,20 +5,22 @@ GEM public_suffix (>= 2.0.2, < 5.0) ethon (0.12.0) ffi (>= 1.3.0) - ffi (1.11.2) - html-proofer (3.14.1) + ffi (1.11.3) + html-proofer (3.15.0) addressable (~> 2.3) mercenary (~> 0.3) - nokogiri (~> 1.10) + nokogumbo (~> 2.0) parallel (~> 1.3) rainbow (~> 3.0) typhoeus (~> 1.3) yell (~> 2.0) mercenary (0.3.6) mini_portile2 (2.4.0) - nokogiri (1.10.5) + nokogiri (1.10.7) mini_portile2 (~> 2.4.0) - parallel (1.19.0) + nokogumbo (2.0.2) + nokogiri (~> 1.8, >= 1.8.4) + parallel (1.19.1) public_suffix (4.0.1) rainbow (3.0.0) typhoeus (1.3.1) diff --git a/pkgs/tools/misc/html-proofer/gemset.nix b/pkgs/tools/misc/html-proofer/gemset.nix index 8cf066c6c68..1f561f52976 100644 --- a/pkgs/tools/misc/html-proofer/gemset.nix +++ b/pkgs/tools/misc/html-proofer/gemset.nix @@ -26,21 +26,21 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0cbads5da12lb3j0mg2hjrd57s5qkkairxh2y6r9bqyblb5b8xbw"; + sha256 = "10ay35dm0lkcqprsiya6q2kwvyid884102ryipr4vrk790yfp8kd"; type = "gem"; }; - version = "1.11.2"; + version = "1.11.3"; }; html-proofer = { - dependencies = ["addressable" "mercenary" "nokogiri" "parallel" "rainbow" "typhoeus" "yell"]; + dependencies = ["addressable" "mercenary" "nokogumbo" "parallel" "rainbow" "typhoeus" "yell"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "16i803vhrygcbln077czhv9ngipljsawr338lbvd0zr2473r8qja"; + sha256 = "0nmwxmn0dxgs53g1cqn251dzmjrklw14cpa6z6wz7cdwvjq47500"; type = "gem"; }; - version = "3.14.1"; + version = "3.15.0"; }; mercenary = { groups = ["default"]; @@ -68,20 +68,31 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "185g3dwba73jqxjr94bd2zk6fil6n9hmcfnfyzh3p1w47vm296r7"; + sha256 = "0r0qpgf80h764k176yr63gqbs2z0xbsp8vlvs2a79d5r9vs83kln"; type = "gem"; }; - version = "1.10.5"; + version = "1.10.7"; + }; + nokogumbo = { + dependencies = ["nokogiri"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0sxjnpjvrn10gdmfw2dimhch861lz00f28hvkkz0b1gc2rb65k9s"; + type = "gem"; + }; + version = "2.0.2"; }; parallel = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0bsg06zklvxv1qkpqhiric2m07108rqlmnl4axv5fzpxx9973pfz"; + sha256 = "12jijkap4akzdv11lm08dglsc8jmc87xcgq6947i1s3qb69f4zn2"; type = "gem"; }; - version = "1.19.0"; + version = "1.19.1"; }; public_suffix = { groups = ["default"]; diff --git a/pkgs/tools/misc/multitail/default.nix b/pkgs/tools/misc/multitail/default.nix index 3037b672498..92945004cb0 100644 --- a/pkgs/tools/misc/multitail/default.nix +++ b/pkgs/tools/misc/multitail/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, ncurses }: stdenv.mkDerivation rec { - version = "6.4.2"; + version = "6.5.0"; pname = "multitail"; src = fetchurl { url = "https://www.vanheusden.com/multitail/${pname}-${version}.tgz"; - sha256 = "1zd1r89xkxngl1pdrvsc877838nwkfqkbcgfqm3vglwalxc587dg"; + sha256 = "1vd9vdxyxsccl64ilx542ya5vlw2bpg6gnkq1x8cfqy6vxvmx7dj"; }; buildInputs = [ ncurses ]; diff --git a/pkgs/tools/misc/noti/default.nix b/pkgs/tools/misc/noti/default.nix index dcc946c854e..a6288b32295 100644 --- a/pkgs/tools/misc/noti/default.nix +++ b/pkgs/tools/misc/noti/default.nix @@ -3,13 +3,13 @@ buildGoPackage rec { pname = "noti"; - version = "3.3.0"; + version = "3.4.0"; src = fetchFromGitHub { owner = "variadico"; repo = "noti"; rev = version; - sha256 = "1644bivjcky07n3rrm83vsms7hw47p4hnp2536q0z3qca5jyri2f"; + sha256 = "0bcwfyd93fx0rzjc9jgg4pvvqbpxwizr044yqqa5rx70gaasz7qa"; }; buildInputs = lib.optional stdenv.isDarwin Cocoa; diff --git a/pkgs/tools/misc/osm2pgsql/default.nix b/pkgs/tools/misc/osm2pgsql/default.nix index 1a4e4d5b3a2..007ae348bc2 100644 --- a/pkgs/tools/misc/osm2pgsql/default.nix +++ b/pkgs/tools/misc/osm2pgsql/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "osm2pgsql"; - version = "1.0.0"; + version = "1.2.0"; src = fetchFromGitHub { owner = "openstreetmap"; repo = pname; rev = version; - sha256 = "1g9qc1z5gzdjd37n586vcmq1qli0lkhbnsrnky0mf22szzv8iwfx"; + sha256 = "1xbzkrjv5d34dahgp9xxhasr8xzygpjbsr675rq59xzy9v7nvs9b"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/tools/misc/parted/default.nix b/pkgs/tools/misc/parted/default.nix index 4934252bed9..0eed491e8a9 100644 --- a/pkgs/tools/misc/parted/default.nix +++ b/pkgs/tools/misc/parted/default.nix @@ -1,28 +1,29 @@ -{ stdenv, fetchurl, fetchpatch, lvm2, libuuid, gettext, readline, perl, python2 -, utillinux, check, enableStatic ? false }: +{ stdenv +, fetchurl +, fetchpatch +, lvm2 +, libuuid +, gettext +, readline +, dosfstools +, e2fsprogs +, perl +, python2 +, utillinux +, check +, enableStatic ? false +}: stdenv.mkDerivation rec { - name = "parted-3.2"; + name = "parted-3.3"; src = fetchurl { url = "mirror://gnu/parted/${name}.tar.xz"; - sha256 = "1r3qpg3bhz37mgvp9chsaa3k0csby3vayfvz8ggsqz194af5i2w5"; + sha256 = "0i1xp367wpqw75b20c3jnism3dg3yqj4a7a22p2jb1h1hyyv9qjp"; }; outputs = [ "out" "dev" "man" "info" ]; - patches = stdenv.lib.optional doCheck ./gpt-unicode-test-fix.patch - ++ stdenv.lib.optional stdenv.hostPlatform.isMusl - (fetchpatch { - url = "https://git.alpinelinux.org/cgit/aports/plain/main/parted/fix-includes.patch?id=9c5cd3c329a40ba4559cc1d8c7d17a9bf95c237b"; - sha256 = "117ypyiwvzym6pi8xmy16wa5z3sbpx7gh6haabs6kfb1x2894z7q"; - }) - ++ stdenv.lib.optional (lvm2 == null) - (fetchpatch { - url = https://git.savannah.gnu.org/cgit/parted.git/patch/?id=7e87ca3c531228d35e13e802d2622006138b104c; - sha256 = "0i29lfg8cwj342q5s7qwqhncz2bkifj5rjc7cx6jd4zqb6ykkndj"; - }); - postPatch = '' patchShebangs tests ''; @@ -42,8 +43,7 @@ stdenv.mkDerivation rec { # Tests were previously failing due to Hydra running builds as uid 0. # That should hopefully be fixed now. doCheck = !stdenv.hostPlatform.isMusl; /* translation test */ - - checkInputs = [ check perl python2 utillinux ]; + checkInputs = [ check dosfstools e2fsprogs perl python2 utillinux ]; meta = { description = "Create, destroy, resize, check, and copy partitions"; diff --git a/pkgs/tools/misc/parted/gpt-unicode-test-fix.patch b/pkgs/tools/misc/parted/gpt-unicode-test-fix.patch deleted file mode 100644 index 3070a2e4666..00000000000 --- a/pkgs/tools/misc/parted/gpt-unicode-test-fix.patch +++ /dev/null @@ -1,34 +0,0 @@ -From Ludo's suggestion at: - - http://debbugs.gnu.org/cgi/bugreport.cgi?msg=8;bug=18258 - -diff --git a/tests/t0251-gpt-unicode.sh b/tests/t0251-gpt-unicode.sh -index c845950..fa63a72 100755 ---- a/tests/t0251-gpt-unicode.sh -+++ b/tests/t0251-gpt-unicode.sh -@@ -22,7 +22,24 @@ dev=loop-file - # create zeroed device - truncate -s 10m $dev || fail=1 - --export LC_ALL=C.UTF-8 -+found_locale=no -+for locale in en_US de_DE fr_FR es_ES -+do -+ LC_ALL="$locale.UTF-8" -+ export LC_ALL -+ -+ # In a UTF-8 locale, the string below prints as 4 characters. -+ if [ `printf 'foo\341\264\244' | wc -m` -eq 4 ]; then -+ found_locale=yes -+ break -+ fi -+done -+ -+if [ "$found_locale" != "yes" ]; then -+ echo "no valid UTF-8 locale found; skipping" >&2 -+ exit 77 -+fi -+ - # create gpt label with named partition - part_name=$(printf 'foo\341\264\244') - parted -s $dev mklabel gpt mkpart primary ext2 1MiB 2MiB name 1 $part_name > empty 2>&1 || fail=1 diff --git a/pkgs/tools/misc/pfetch/default.nix b/pkgs/tools/misc/pfetch/default.nix new file mode 100644 index 00000000000..491844f26b7 --- /dev/null +++ b/pkgs/tools/misc/pfetch/default.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "pfetch"; + version = "0.4.0"; + + src = fetchFromGitHub { + owner = "dylanaraps"; + repo = "pfetch"; + rev = version; + sha256 = "180vvbmvak888vs4dgzlmqk0ss4qfsz09700n4p8s68j7krkxsfq"; + }; + + dontbuild = true; + + installPhase = '' + mkdir -p $out/bin + cp pfetch $out/bin + ''; + + meta = with stdenv.lib; { + description = "A pretty system information tool written in POSIX sh"; + homepage = https://github.com/dylanaraps/pfetch; + license = licenses.mit; + platforms = platforms.all; + maintainers = with maintainers; [ equirosa ]; + }; +} diff --git a/pkgs/tools/misc/phoronix-test-suite/default.nix b/pkgs/tools/misc/phoronix-test-suite/default.nix index 88f24676b79..2436bbe4381 100644 --- a/pkgs/tools/misc/phoronix-test-suite/default.nix +++ b/pkgs/tools/misc/phoronix-test-suite/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "phoronix-test-suite"; - version = "9.0.1"; + version = "9.2.0"; src = fetchurl { url = "https://phoronix-test-suite.com/releases/${pname}-${version}.tar.gz"; - sha256 = "056f2z1ssr2z7qnacq5aihpnawl05blbbw0bv64pkrkl0wss85x1"; + sha256 = "04r4zm550kp44pzl5xgj8abncrd1rxcfs7hqm38an1lz7shiisfi"; }; buildInputs = [ php ]; diff --git a/pkgs/tools/misc/ponysay/default.nix b/pkgs/tools/misc/ponysay/default.nix index 1aa7dbedd93..3fc3efa0eda 100644 --- a/pkgs/tools/misc/ponysay/default.nix +++ b/pkgs/tools/misc/ponysay/default.nix @@ -26,7 +26,7 @@ stdenv.mkDerivation { meta = { description = "Cowsay reimplemention for ponies"; - homepage = http://erkin.co/ponysay/; + homepage = "https://github.com/erkin/ponysay"; license = stdenv.lib.licenses.gpl3; maintainers = with stdenv.lib.maintainers; [ bodil ]; platforms = with stdenv.lib.platforms; unix; diff --git a/pkgs/tools/misc/powerline-go/default.nix b/pkgs/tools/misc/powerline-go/default.nix index 5c1b1be2db3..47336e54d67 100644 --- a/pkgs/tools/misc/powerline-go/default.nix +++ b/pkgs/tools/misc/powerline-go/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "powerline-go"; - version = "1.13.0"; + version = "1.15.0"; src = fetchFromGitHub { owner = "justjanne"; repo = pname; rev = "v${version}"; - sha256 = "0hgc0ji9jcsq5qnvx54dvpq8qx80mgdbvkllzavnvqr7md638zk9"; + sha256 = "06i07m68l24v29j01qp2y91rwsfqh4x1nc8sxkjzrc7q1c7fsc1r"; }; - modSha256 = "0800r08rawv4fz08d332z0fy6pd16l1dyflz3h91ba00g59wc2ah"; + modSha256 = "0mz1qrwar9cgrhrgw4z3gwhjj62bnfnn59ji31zkyvwlc1mqh9an"; meta = with stdenv.lib; { description = "A Powerline like prompt for Bash, ZSH and Fish"; diff --git a/pkgs/tools/misc/pspg/default.nix b/pkgs/tools/misc/pspg/default.nix index ca769be02d8..c42ea76ca85 100644 --- a/pkgs/tools/misc/pspg/default.nix +++ b/pkgs/tools/misc/pspg/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "pspg"; - version = "2.1.8"; + version = "2.6.0"; src = fetchFromGitHub { owner = "okbob"; repo = pname; rev = version; - sha256 = "0nfc1cv2l2v1rav5jj7jz5wyb2df5l3iwrvvpkvxxpv3qll8kcfv"; + sha256 = "0cs0hsrrknl2cv39zzq4wydx5p7095hz18yly572fnniyi4ljbdg"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/misc/rename/default.nix b/pkgs/tools/misc/rename/default.nix index 770b229a315..e32b016016b 100644 --- a/pkgs/tools/misc/rename/default.nix +++ b/pkgs/tools/misc/rename/default.nix @@ -12,6 +12,7 @@ perlPackages.buildPerlPackage { }; meta = with stdenv.lib; { description = "Rename files according to a Perl rewrite expression"; + homepage = "https://github.com/pstray/rename"; maintainers = with maintainers; [ mkg ]; license = with licenses; [ gpl1Plus ]; }; diff --git a/pkgs/tools/misc/snapper/default.nix b/pkgs/tools/misc/snapper/default.nix index 26cdbfeab67..ccd43270404 100644 --- a/pkgs/tools/misc/snapper/default.nix +++ b/pkgs/tools/misc/snapper/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "snapper"; - version = "0.8.5"; + version = "0.8.6"; src = fetchFromGitHub { owner = "openSUSE"; repo = "snapper"; rev = "v${version}"; - sha256 = "1h8qpkfcp04xpnaki2hmc7h3536dnjli2cczhzma6q9m985y45kr"; + sha256 = "1czx8brfhbfi614mqw46d38xwq6w7d5aca3pibwx8zz47rn99w6d"; }; nativeBuildInputs = [ diff --git a/pkgs/tools/misc/starship/default.nix b/pkgs/tools/misc/starship/default.nix index 2c6c1e55e19..4fdc2bbda2a 100644 --- a/pkgs/tools/misc/starship/default.nix +++ b/pkgs/tools/misc/starship/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "starship"; - version = "0.27.0"; + version = "0.30.1"; src = fetchFromGitHub { owner = "starship"; repo = pname; rev = "v${version}"; - sha256 = "1bps40rzljxihl87hbbdlas5v9lphhsjzgaqz2y0haqwjj1vjpm9"; + sha256 = "19h6ahbqfrq5jfdjqxd7phzh1lanqqvkb1phr4fx6qnn5icj9hlm"; }; buildInputs = stdenv.lib.optionals stdenv.isDarwin [ libiconv darwin.apple_sdk.frameworks.Security ]; @@ -18,7 +18,7 @@ rustPlatform.buildRustPackage rec { --replace "/bin/echo" "echo" ''; - cargoSha256 = "110ajwgdshakcqxfnqi30yy0miikp2qx86flwfkd78jawfll2krp"; + cargoSha256 = "0391l44rqshjz62658mfl58c2npv7k11l4lb4kk9gb3ywdhbjv26"; checkPhase = "cargo test -- --skip directory::home_directory --skip directory::directory_in_root"; meta = with stdenv.lib; { diff --git a/pkgs/tools/misc/tio/default.nix b/pkgs/tools/misc/tio/default.nix index 3a8388280d6..9ee9b977ab2 100644 --- a/pkgs/tools/misc/tio/default.nix +++ b/pkgs/tools/misc/tio/default.nix @@ -16,6 +16,6 @@ stdenv.mkDerivation rec { homepage = https://tio.github.io/; license = licenses.gpl2Plus; maintainers = with maintainers; [ yegortimoshenko ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/tools/misc/tmux/default.nix b/pkgs/tools/misc/tmux/default.nix index c628ae30e95..1aa221bd59e 100644 --- a/pkgs/tools/misc/tmux/default.nix +++ b/pkgs/tools/misc/tmux/default.nix @@ -21,7 +21,7 @@ in stdenv.mkDerivation rec { pname = "tmux"; - version = "3.0"; + version = "3.0a"; outputs = [ "out" "man" ]; @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { owner = "tmux"; repo = "tmux"; rev = version; - sha256 = "0772hajzgpl4cvb9l2bma9hmnh4jg1phvqr2gg4292w34n5dsl3k"; + sha256 = "0y9lv1yr0x50v3k70vzkc8hfr7yijlsi30p7dr7i8akp3lwmmc7h"; }; nativeBuildInputs = [ diff --git a/pkgs/tools/misc/vdirsyncer/default.nix b/pkgs/tools/misc/vdirsyncer/default.nix index 7ac9542c6b5..328c343ba70 100644 --- a/pkgs/tools/misc/vdirsyncer/default.nix +++ b/pkgs/tools/misc/vdirsyncer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, python3Packages, fetchFromGitHub, fetchpatch, rustPlatform, pkgconfig, openssl, Security }: +{ stdenv, python3Packages, fetchFromGitHub, fetchpatch, rustPlatform, pkgconfig, openssl, CoreServices, Security }: # Packaging documentation at: # https://github.com/untitaker/vdirsyncer/blob/master/docs/packaging.rst @@ -20,7 +20,7 @@ python3Packages.buildPythonApplication rec { inherit src; sourceRoot = "source/rust"; cargoSha256 = "1n1dxq3klsry5mmbfff2jv7ih8mr5zvpncrdgba6qs93wi77qi0y"; - buildInputs = [ pkgconfig openssl ] ++ stdenv.lib.optional stdenv.isDarwin Security; + buildInputs = [ pkgconfig openssl ] ++ stdenv.lib.optionals stdenv.isDarwin [ CoreServices Security ]; }; propagatedBuildInputs = with python3Packages; [ @@ -37,6 +37,13 @@ python3Packages.buildPythonApplication rec { checkInputs = with python3Packages; [ hypothesis pytest pytest-localserver pytest-subtesthack ]; + patches = [ + (fetchpatch { + url = "https://github.com/pimutils/vdirsyncer/commit/7b636e8e40d69c495901f965b9c0686513659e44.patch"; + sha256 = "0vl942ii5iad47y63v0ngmhfp37n30nxyk4j7h64b95fk38vfwx9"; + }) + ]; + postPatch = '' # see https://github.com/pimutils/vdirsyncer/pull/805 substituteInPlace setup.cfg --replace --duration --durations diff --git a/pkgs/tools/misc/vector/default.nix b/pkgs/tools/misc/vector/default.nix index b5e34165030..a304873ca1e 100644 --- a/pkgs/tools/misc/vector/default.nix +++ b/pkgs/tools/misc/vector/default.nix @@ -4,33 +4,22 @@ , features ? (if stdenv.isAarch64 - then [ "jemallocator" ] - else [ "leveldb" "jemallocator" ]) - -# Unfortunately, buildRustPackage does not really support using overrideAttrs -# on the underlying fields, because it doesn't pass them to stdenv.mkDerivation -# as an attr. making it a parameter is the only way to do so. sigh - -, version ? "0.5.0" - -, srcRef ? { - rev = "refs/tags/v${version}"; - sha256 = "0niyxlvphn3awrpfh1hbqy767cckgjzyjrkqjxj844czxhh1hhff"; - } - -, cargoSha256 ? "0bdgan891hrah54g6aaysqizkxrfsbidnxihai0i7h7knzq9gsk5" -, patches ? [] + then [ "shiplift/unix-socket" "jemallocator" ] + else [ "leveldb" "leveldb/leveldb-sys-2" "shiplift/unix-socket" "jemallocator" ]) }: rustPlatform.buildRustPackage rec { pname = "vector"; - inherit version cargoSha256 patches; + version = "0.6.0"; + src = fetchFromGitHub { - owner = "timberio"; - repo = pname; - inherit (srcRef) rev sha256; + owner = "timberio"; + repo = pname; + rev = "refs/tags/v${version}"; + sha256 = "0bb4552nwkdpnxhaq2mn4iz5w92ggqxc1b78jq2vjbh1317sj9hw"; }; + cargoSha256 = "1akyzrscc6pv7ggb1kna05vvxhfzrf1b4kji4bah1ry3yyqxdjsj"; buildInputs = [ openssl pkgconfig protobuf ] ++ stdenv.lib.optional stdenv.isDarwin [ Security libiconv ]; diff --git a/pkgs/tools/misc/websocat/default.nix b/pkgs/tools/misc/websocat/default.nix index b994aecfc0e..f682bb3d2eb 100644 --- a/pkgs/tools/misc/websocat/default.nix +++ b/pkgs/tools/misc/websocat/default.nix @@ -1,28 +1,27 @@ -{ stdenv, fetchFromGitHub, pkgconfig, openssl, rustPlatform, Security -}: +{ stdenv, fetchFromGitHub, pkgconfig, openssl, rustPlatform, Security }: rustPlatform.buildRustPackage rec { pname = "websocat"; - version = "1.3.0"; + version = "1.5.0"; src = fetchFromGitHub { - owner = "vi"; - repo = "websocat"; - rev = "v${version}"; - sha256 = "1gf2snr12vnx2mhsrwkb5274r1pvdrf8m3bybrqbh8s9wd83nrh6"; + owner = "vi"; + repo = "websocat"; + rev = "v${version}"; + sha256 = "1lmra91ahpk4gamhnbdr066hl4vzwfh5i09fbabzdnxcvylbx8zf"; }; cargoBuildFlags = [ "--features=ssl" ]; - cargoSha256 = "1zqfvbihf8xwgh092n9wzm3mdgbv0n99gjsfk9przqj2vh7wfvh2"; + cargoSha256 = "163kwpahrbb9v88kjkrc0jx2np3c068pspr8rqrm9cb8jyl2njrr"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ openssl ] ++ stdenv.lib.optional stdenv.isDarwin Security; meta = with stdenv.lib; { description = "Command-line client for WebSockets (like netcat/socat)"; - homepage = https://github.com/vi/websocat; - license = with licenses; [ mit ]; - maintainers = [ maintainers.thoughtpolice ]; - platforms = platforms.all; + homepage = "https://github.com/vi/websocat"; + license = licenses.mit; + maintainers = with maintainers; [ thoughtpolice filalex77 ]; + platforms = platforms.all; }; } diff --git a/pkgs/tools/misc/xilinx-bootgen/default.nix b/pkgs/tools/misc/xilinx-bootgen/default.nix new file mode 100644 index 00000000000..e7aa30ac059 --- /dev/null +++ b/pkgs/tools/misc/xilinx-bootgen/default.nix @@ -0,0 +1,37 @@ +{ stdenv, fetchFromGitHub, openssl }: + +stdenv.mkDerivation { + pname = "xilinx-bootgen"; + version = "unstable-2019-10-23"; + + src = fetchFromGitHub { + owner = "xilinx"; + repo = "bootgen"; + rev = "f9f477adf243fa40bc8c7316a7aac37a0efd426d"; + sha256 = "1qciz3jkzy0z0lcgqnhch9pqj0202mk5ghzp2m9as5pzk8n8hrbz"; + }; + + buildInputs = [ openssl ]; + + enableParallelBuilding = true; + + installPhase = '' + install -Dm755 bootgen $out/bin/bootgen + ''; + + meta = with stdenv.lib; { + description = "Generate Boot Images for Xilinx Zynq and ZU+ SoCs"; + longDescription = '' + Bootgen for Xilinx Zynq and ZU+ SoCs, without code related to generating + obfuscated key and without code to support FPGA encryption and + authentication. These features are only available as part of Bootgen + shipped with Vivado tools. + + For more details about Bootgen, please refer to Xilinx UG1283. + ''; + homepage = "https://github.com/Xilinx/bootgen"; + license = licenses.asl20; + platforms = platforms.linux; + maintainers = [ maintainers.flokli ]; + }; +} diff --git a/pkgs/tools/networking/6tunnel/default.nix b/pkgs/tools/networking/6tunnel/default.nix new file mode 100644 index 00000000000..bf0e8ba3316 --- /dev/null +++ b/pkgs/tools/networking/6tunnel/default.nix @@ -0,0 +1,23 @@ +{ stdenv, lib, fetchFromGitHub, autoreconfHook }: + +stdenv.mkDerivation rec { + pname = "6tunnel"; + version = "0.13"; + + src = fetchFromGitHub { + owner = "wojtekka"; + repo = pname; + rev = version; + sha256 = "0zsx9d6xz5w8zvrqsm8r625gpbqqhjzvjdzc3z8yix668yg8ff8h"; + }; + + nativeBuildInputs = [ autoreconfHook ]; + + meta = with lib; { + description = "Tunnelling for application that don't speak IPv6"; + homepage = "https://github.com/wojtekka/6tunnel"; + license = licenses.gpl2; + maintainers = with maintainers; [ filalex77 ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/tools/networking/aircrack-ng/default.nix b/pkgs/tools/networking/aircrack-ng/default.nix index f367d2817cd..9d948eaf822 100644 --- a/pkgs/tools/networking/aircrack-ng/default.nix +++ b/pkgs/tools/networking/aircrack-ng/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, libpcap, openssl, zlib, wirelesstools , iw, ethtool, pciutils, libnl, pkgconfig, makeWrapper -, autoreconfHook }: +, autoreconfHook, usbutils }: stdenv.mkDerivation rec { name = "aircrack-ng-1.5.2"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { postFixup = '' wrapProgram $out/bin/airmon-ng --prefix PATH : ${stdenv.lib.makeBinPath [ - ethtool iw pciutils + ethtool iw pciutils usbutils ]} ''; diff --git a/pkgs/tools/networking/chrony/allow-clock_adjtime.patch b/pkgs/tools/networking/chrony/allow-clock_adjtime.patch new file mode 100644 index 00000000000..2fa3baca722 --- /dev/null +++ b/pkgs/tools/networking/chrony/allow-clock_adjtime.patch @@ -0,0 +1,26 @@ +From 0cf506c92967c84f9ed83ba9e1be946a7fda6425 Mon Sep 17 00:00:00 2001 +From: Miroslav Lichvar <mlichvar@redhat.com> +Date: Mon, 2 Dec 2019 12:47:13 +0100 +Subject: sys_linux: allow clock_adjtime in seccomp filter + +The adjtimex() function in glibc was switched to the clock_adjtime +system call. + +diff --git a/sys_linux.c b/sys_linux.c +index 63eb8f1..fcf89c2 100644 +--- a/sys_linux.c ++++ b/sys_linux.c +@@ -478,8 +478,8 @@ SYS_Linux_EnableSystemCallFilter(int level) + { + const int syscalls[] = { + /* Clock */ +- SCMP_SYS(adjtimex), SCMP_SYS(clock_gettime), SCMP_SYS(gettimeofday), +- SCMP_SYS(settimeofday), SCMP_SYS(time), ++ SCMP_SYS(adjtimex), SCMP_SYS(clock_adjtime), SCMP_SYS(clock_gettime), ++ SCMP_SYS(gettimeofday), SCMP_SYS(settimeofday), SCMP_SYS(time), + /* Process */ + SCMP_SYS(clone), SCMP_SYS(exit), SCMP_SYS(exit_group), SCMP_SYS(getpid), + SCMP_SYS(getrlimit), SCMP_SYS(rt_sigaction), SCMP_SYS(rt_sigreturn), +-- +cgit v0.10.2 + diff --git a/pkgs/tools/networking/chrony/default.nix b/pkgs/tools/networking/chrony/default.nix index 69c4f897c93..c0c3281431f 100644 --- a/pkgs/tools/networking/chrony/default.nix +++ b/pkgs/tools/networking/chrony/default.nix @@ -12,6 +12,11 @@ stdenv.mkDerivation rec { sha256 = "1d9r2dhslll4kzdmxrj0qfgwq1b30d4l3s5cwr8yr93029dpj0jf"; }; + patches = [ + ./allow-clock_adjtime.patch + ./fix-seccomp-build.patch + ]; + postPatch = '' patchShebangs test ''; diff --git a/pkgs/tools/networking/chrony/fix-seccomp-build.patch b/pkgs/tools/networking/chrony/fix-seccomp-build.patch new file mode 100644 index 00000000000..6888e7efeb7 --- /dev/null +++ b/pkgs/tools/networking/chrony/fix-seccomp-build.patch @@ -0,0 +1,13 @@ +diff --git a/sys_linux.c b/sys_linux.c +index 898dc7a7f75..fcd334ecf03 100644 +--- a/sys_linux.c ++++ b/sys_linux.c +@@ -503,7 +503,7 @@ SYS_Linux_EnableSystemCallFilter(int level) + SCMP_SYS(socketcall), + /* General I/O */ + SCMP_SYS(_newselect), SCMP_SYS(close), SCMP_SYS(open), SCMP_SYS(openat), SCMP_SYS(pipe), +- SCMP_SYS(pipe2), SCMP_SYS(poll), SCMP_SYS(ppoll), SCMP_SYS(pselect6), SCMP_SYS(read), ++ SCMP_SYS(pipe2), SCMP_SYS(poll), SCMP_SYS(pselect6), SCMP_SYS(read), + SCMP_SYS(futex), SCMP_SYS(select), SCMP_SYS(set_robust_list), SCMP_SYS(write), + /* Miscellaneous */ + SCMP_SYS(getrandom), SCMP_SYS(sysinfo), SCMP_SYS(uname), diff --git a/pkgs/tools/networking/croc/default.nix b/pkgs/tools/networking/croc/default.nix index 828d61ca43c..0a754140706 100644 --- a/pkgs/tools/networking/croc/default.nix +++ b/pkgs/tools/networking/croc/default.nix @@ -2,7 +2,7 @@ buildGoModule rec { pname = "croc"; - version = "6.4.6"; + version = "6.4.7"; goPackagePath = "github.com/schollz/croc"; @@ -10,7 +10,7 @@ buildGoModule rec { owner = "schollz"; repo = pname; rev = "v${version}"; - sha256 = "13sgjyrabr34a6sz8lzc21zvv5wc5lkgwbx0ar8afmikkrpdypln"; + sha256 = "1i8g90sr5rk7flfxvmxca6z5vp9wh8zraf2lfz618s5axds3kb50"; }; modSha256 = "1w84xqnn9fnkakak6j069app4ybbxpwq79g8qypwvmqg5bhvzywg"; diff --git a/pkgs/tools/networking/curl/default.nix b/pkgs/tools/networking/curl/default.nix index 24c3145c7db..051271e9788 100644 --- a/pkgs/tools/networking/curl/default.nix +++ b/pkgs/tools/networking/curl/default.nix @@ -5,6 +5,7 @@ , zlibSupport ? true, zlib ? null , sslSupport ? zlibSupport, openssl ? null , gnutlsSupport ? false, gnutls ? null +, wolfsslSupport ? false, wolfssl ? null , scpSupport ? zlibSupport && !stdenv.isSunOS && !stdenv.isCygwin, libssh2 ? null , gssSupport ? !stdenv.hostPlatform.isWindows, libkrb5 ? null , c-aresSupport ? false, c-ares ? null @@ -17,7 +18,10 @@ assert ldapSupport -> openldap != null; assert zlibSupport -> zlib != null; assert sslSupport -> openssl != null; assert !(gnutlsSupport && sslSupport); +assert !(gnutlsSupport && wolfsslSupport); +assert !(sslSupport && wolfsslSupport); assert gnutlsSupport -> gnutls != null; +assert wolfsslSupport -> wolfssl != null; assert scpSupport -> libssh2 != null; assert c-aresSupport -> c-ares != null; assert brotliSupport -> brotli != null; @@ -53,6 +57,7 @@ stdenv.mkDerivation rec { optional c-aresSupport c-ares ++ optional sslSupport openssl ++ optional gnutlsSupport gnutls ++ + optional wolfsslSupport wolfssl ++ optional scpSupport libssh2 ++ optional brotliSupport brotli; @@ -67,7 +72,8 @@ stdenv.mkDerivation rec { # to nss-cacert from the default profile. "--without-ca-bundle" "--without-ca-path" - "--with-ca-fallback" + # The build fails when using wolfssl with --with-ca-fallback + ( if wolfsslSupport then "--without-ca-fallback" else "--with-ca-fallback") "--disable-manual" ( if sslSupport then "--with-ssl=${openssl.dev}" else "--without-ssl" ) ( if gnutlsSupport then "--with-gnutls=${gnutls.dev}" else "--without-gnutls" ) @@ -77,6 +83,7 @@ stdenv.mkDerivation rec { ( if idnSupport then "--with-libidn=${libidn.dev}" else "--without-libidn" ) ( if brotliSupport then "--with-brotli" else "--without-brotli" ) ] + ++ stdenv.lib.optional wolfsslSupport "--with-wolfssl=${wolfssl.dev}" ++ stdenv.lib.optional c-aresSupport "--enable-ares=${c-ares}" ++ stdenv.lib.optional gssSupport "--with-gssapi=${libkrb5.dev}" # For the 'urandom', maybe it should be a cross-system option diff --git a/pkgs/tools/networking/curlie/default.nix b/pkgs/tools/networking/curlie/default.nix index 2073c0b8497..fa1471aa620 100644 --- a/pkgs/tools/networking/curlie/default.nix +++ b/pkgs/tools/networking/curlie/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "curlie"; - version = "1.2.0"; + version = "1.3.1"; src= fetchFromGitHub { owner = "rs"; repo = pname; rev = "v${version}"; - sha256 = "0jgwd1amwjpmfgg08j9m9i15rpxijhmld9najzqb2gf8c1n5d8cf"; + sha256 = "09v8alrbw6qva3q3bcqxnyjm7svagfxqvhdff7cqf5pbmkxnhln9"; }; modSha256 = "18nwq99vv3nbdwfilfn8v64mn58jviwybi93li0lcg7779nxab3d"; diff --git a/pkgs/tools/networking/frp/default.nix b/pkgs/tools/networking/frp/default.nix new file mode 100644 index 00000000000..87932cd02bd --- /dev/null +++ b/pkgs/tools/networking/frp/default.nix @@ -0,0 +1,31 @@ +{ buildGoModule, lib, fetchFromGitHub }: + +buildGoModule rec { + pname = "frp"; + version = "0.30.0"; + + src = fetchFromGitHub { + owner = "fatedier"; + repo = pname; + rev = "v${version}"; + sha256 = "15q2lfwqyicgllhh5fn3a8g3iw9m42cd0izb99a24hn57pd9cr0n"; + }; + + modSha256 = "1zbl0gfc99pbzdacxhfa1k3y6i7v13sb441wpbp9aygxhvwqrms9"; + + subPackages = [ "cmd/frpc" "cmd/frps" ]; + + meta = with lib; { + description = "Fast reverse proxy"; + longDescription = '' + frp is a fast reverse proxy to help you expose a local server behind a + NAT or firewall to the Internet. As of now, it supports TCP and UDP, as + well as HTTP and HTTPS protocols, where requests can be forwarded to + internal services by domain name. frp also has a P2P connect mode. + ''; + homepage = "https://github.com/fatedier/frp"; + license = licenses.asl20; + maintainers = with maintainers; [ filalex77 ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/tools/networking/libreswan/default.nix b/pkgs/tools/networking/libreswan/default.nix index 9a0b8c9ebf5..0f043c58a18 100644 --- a/pkgs/tools/networking/libreswan/default.nix +++ b/pkgs/tools/networking/libreswan/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, makeWrapper, pkgconfig, systemd, gmp, unbound, bison, flex, pam, libevent, libcap_ng, curl, nspr, bash, iproute, iptables, procps, coreutils, gnused, gawk, nss, which, python, - docs ? false, xmlto + docs ? false, xmlto, libselinux, ldns }: let optional = stdenv.lib.optional; - version = "3.18"; + version = "3.29"; name = "libreswan-${version}"; binPath = stdenv.lib.makeBinPath [ bash iproute iptables procps coreutils gnused gawk nss.tools which python @@ -14,6 +14,7 @@ let in assert docs -> xmlto != null; +assert stdenv.isLinux -> libselinux != null; stdenv.mkDerivation { inherit name; @@ -21,7 +22,7 @@ stdenv.mkDerivation { src = fetchurl { url = "https://download.libreswan.org/${name}.tar.gz"; - sha256 = "0zginnakxw7m79zrdvfdvliaiyg78zgqfqkks9z5d1rjj5w13xig"; + sha256 = "0gmbb1m5in5dvnbk1n31r8myrdankzvi6yk9gcqbcwijyih423nn"; }; # These flags were added to compile v3.18. Try to lift them when updating. @@ -34,15 +35,21 @@ stdenv.mkDerivation { nativeBuildInputs = [ makeWrapper pkgconfig ]; buildInputs = [ bash iproute iptables systemd coreutils gnused gawk gmp unbound bison flex pam libevent - libcap_ng curl nspr nss python ] - ++ optional docs xmlto; + libcap_ng curl nspr nss python ldns ] + ++ optional docs xmlto + ++ optional stdenv.isLinux libselinux; prePatch = '' # Correct bash path sed -i -e 's|/bin/bash|/usr/bin/env bash|' mk/config.mk - # Fix systemd unit directory, and prevent the makefile from trying to reload the systemd daemon - sed -i -e 's|UNITDIR=.*$|UNITDIR=$\{out}/etc/systemd/system/|' -e 's|systemctl --system daemon-reload|true|' initsystems/systemd/Makefile + # Fix systemd unit directory, and prevent the makefile from trying to reload the + # systemd daemon or create tmpfiles + sed -i -e 's|UNITDIR=.*$|UNITDIR=$\{out}/etc/systemd/system/|g' \ + -e 's|TMPFILESDIR=.*$|TMPFILESDIR=$\{out}/tmpfiles.d/|g' \ + -e 's|systemctl|true|g' \ + -e 's|systemd-tmpfiles|true|g' \ + initsystems/systemd/Makefile # Fix the ipsec program from crushing the PATH sed -i -e 's|\(PATH=".*"\):.*$|\1:$PATH|' programs/ipsec/ipsec.in @@ -51,8 +58,6 @@ stdenv.mkDerivation { sed -i -e 's|#!/usr/bin/python|#!/usr/bin/env python|' -e 's/^\(\W*\)installstartcheck()/\1sscmd = "ss"\n\0/' programs/verify/verify.in ''; - patches = [ ./libreswan-3.18-glibc-2.26.patch ]; - # Set appropriate paths for build preBuild = "export INC_USRLOCAL=\${out}"; diff --git a/pkgs/tools/networking/libreswan/libreswan-3.18-glibc-2.26.patch b/pkgs/tools/networking/libreswan/libreswan-3.18-glibc-2.26.patch deleted file mode 100644 index 33c44f617a0..00000000000 --- a/pkgs/tools/networking/libreswan/libreswan-3.18-glibc-2.26.patch +++ /dev/null @@ -1,36 +0,0 @@ -diff --git a/lib/libswan/id.c b/lib/libswan/id.c -index 8f06275..efb0394 100644 ---- a/lib/libswan/id.c -+++ b/lib/libswan/id.c -@@ -22,6 +22,7 @@ - #include <sys/socket.h> - #include <netinet/in.h> - #include <arpa/inet.h> -+#include <limits.h> - #include <unistd.h> - #ifndef HOST_NAME_MAX /* POSIX 1003.1-2001 says <unistd.h> defines this */ - #define HOST_NAME_MAX 255 /* upper bound, according to SUSv2 */ -diff --git a/linux/include/libreswan.h b/linux/include/libreswan.h -index c5efc6a..b0af4d7 100644 ---- a/linux/include/libreswan.h -+++ b/linux/include/libreswan.h -@@ -211,6 +211,7 @@ static inline deltatime_t monotimediff(monotime_t a, monotime_t b) { - #include <assert.h> - #define user_assert(foo) assert(foo) - #include <stdio.h> -+#include <stdint.h> - - # define uint8_t u_int8_t - # define uint16_t u_int16_t -diff --git a/programs/pluto/rcv_whack.c b/programs/pluto/rcv_whack.c -index 588c66c..4fc6289 100644 ---- a/programs/pluto/rcv_whack.c -+++ b/programs/pluto/rcv_whack.c -@@ -24,6 +24,7 @@ - #include <stddef.h> - #include <stdlib.h> - #include <string.h> -+#include <limits.h> - #include <unistd.h> - #ifndef HOST_NAME_MAX /* POSIX 1003.1-2001 says <unistd.h> defines this */ - # define HOST_NAME_MAX 255 /* upper bound, according to SUSv2 */ diff --git a/pkgs/tools/networking/mailutils/default.nix b/pkgs/tools/networking/mailutils/default.nix index 40eeed7f050..dcf377ca0c0 100644 --- a/pkgs/tools/networking/mailutils/default.nix +++ b/pkgs/tools/networking/mailutils/default.nix @@ -1,15 +1,15 @@ { stdenv, fetchurl, fetchpatch, autoreconfHook, dejagnu, gettext, pkgconfig , gdbm, pam, readline, ncurses, gnutls, guile, texinfo, gnum4, sasl, fribidi, nettools -, python, gss, libmysqlclient, system-sendmail }: +, python3, gss, libmysqlclient, system-sendmail }: stdenv.mkDerivation rec { name = "${project}-${version}"; project = "mailutils"; - version = "3.2"; + version = "3.8"; src = fetchurl { url = "mirror://gnu/${project}/${name}.tar.xz"; - sha256 = "0zh7xn8yvnw9zkc7gi5290i34viwxp1rn0g1q9nyvmckkvk59lwn"; + sha256 = "1wkn9ch664477r4d8jk9153w5msljsbj99907k7zgzpmywbs6ba7"; }; postPatch = '' @@ -29,17 +29,11 @@ stdenv.mkDerivation rec { buildInputs = [ gdbm pam readline ncurses gnutls guile texinfo gnum4 sasl fribidi nettools - gss libmysqlclient python + gss libmysqlclient python3 ]; patches = [ - (fetchpatch { - url = "https://git.savannah.gnu.org/cgit/mailutils.git/patch/?id=afbb33cf9ff"; - excludes = [ "NEWS" ]; - sha256 = "0yzkfx3j1zkkb43fhchjqphw4xznbclj39bjzjggv32gppy6d1db"; - }) ./fix-build-mb-len-max.patch - ./fix-test-ali-awk.patch ./path-to-cat.patch ]; diff --git a/pkgs/tools/networking/mailutils/fix-test-ali-awk.patch b/pkgs/tools/networking/mailutils/fix-test-ali-awk.patch deleted file mode 100644 index 3d301d530de..00000000000 --- a/pkgs/tools/networking/mailutils/fix-test-ali-awk.patch +++ /dev/null @@ -1,16 +0,0 @@ -diff --git a/mh/tests/ali.at b/mh/tests/ali.at -index 28c0e5451..c76cf9363 100644 ---- a/mh/tests/ali.at -+++ b/mh/tests/ali.at -@@ -85,9 +85,9 @@ ali -a ./mh_aliases korzen | tr -d ' ' - [expout]) - - MH_CHECK([ali: group id],[ali05 ali-group-id ali-gid],[ --cat /etc/passwd | awk -F : '/^#/ { next } $4==0 { print $1 }' > expout -+cat /etc/passwd | awk -F : '/^#/ { next } $4==0 { print $1; exit }' > expout - test -s expout || AT_SKIP_TEST --name=`awk -F : '/^#/ { next } $3==0 { print $1 }' /etc/group < /dev/null` -+name=`awk -F : '/^#/ { next } $3==0 { print $1; exit }' /etc/group < /dev/null` - test -z "$name" && AT_SKIP_TEST - - echo "korzen: +$name" > mh_aliases diff --git a/pkgs/tools/networking/mu/default.nix b/pkgs/tools/networking/mu/default.nix index bd035e8f03c..6c2a42e3a24 100644 --- a/pkgs/tools/networking/mu/default.nix +++ b/pkgs/tools/networking/mu/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, sqlite, pkgconfig, autoreconfHook, pmccabe , xapian, glib, gmime3, texinfo , emacs, guile -, gtk3, webkitgtk24x-gtk3, libsoup, icu +, gtk3, webkitgtk, libsoup, icu , withMug ? false }: stdenv.mkDerivation rec { @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { buildInputs = [ sqlite xapian glib gmime3 texinfo emacs guile libsoup icu - ] ++ stdenv.lib.optionals withMug [ gtk3 webkitgtk24x-gtk3 ]; + ] ++ stdenv.lib.optionals withMug [ gtk3 webkitgtk ]; nativeBuildInputs = [ pkgconfig autoreconfHook pmccabe ]; diff --git a/pkgs/tools/networking/network-manager/default.nix b/pkgs/tools/networking/network-manager/default.nix index 4e015254658..e762ac73844 100644 --- a/pkgs/tools/networking/network-manager/default.nix +++ b/pkgs/tools/networking/network-manager/default.nix @@ -10,11 +10,11 @@ let pythonForDocs = python3.withPackages (pkgs: with pkgs; [ pygobject3 ]); in stdenv.mkDerivation rec { pname = "network-manager"; - version = "1.20.6"; + version = "1.20.8"; src = fetchurl { url = "mirror://gnome/sources/NetworkManager/${stdenv.lib.versions.majorMinor version}/NetworkManager-${version}.tar.xz"; - sha256 = "0fa5my2czxxlr0lcrzm4zcbcfmvzflnzg1n0yrf6wssa07qaklp8"; + sha256 = "1ijpnx25wy5bcvp4mc49va942q56d0pncpj4jpknpdzwilmf455d"; }; outputs = [ "out" "dev" "devdoc" "man" "doc" ]; diff --git a/pkgs/tools/networking/openapi-generator-cli/default.nix b/pkgs/tools/networking/openapi-generator-cli/default.nix index 9429dee64bd..1cb8e02130f 100644 --- a/pkgs/tools/networking/openapi-generator-cli/default.nix +++ b/pkgs/tools/networking/openapi-generator-cli/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, jre, makeWrapper }: stdenv.mkDerivation rec { - version = "4.2.1"; + version = "4.2.2"; pname = "openapi-generator-cli"; jarfilename = "${pname}-${version}.jar"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://central.maven.org/maven2/org/openapitools/${pname}/${version}/${jarfilename}"; - sha256 = "1inkiqbr183ksmkvpawagv1gqgc323wa1d6sdrd33pb9lk6wahdl"; + sha256 = "1pafv432ll3pp52580pbnk0gnrm6byl5fkrf1rarhxfkpkr82yif"; }; phases = [ "installPhase" ]; diff --git a/pkgs/tools/networking/openfortivpn/default.nix b/pkgs/tools/networking/openfortivpn/default.nix index 2672996a095..d1a73f1c148 100644 --- a/pkgs/tools/networking/openfortivpn/default.nix +++ b/pkgs/tools/networking/openfortivpn/default.nix @@ -3,7 +3,7 @@ with stdenv.lib; let repo = "openfortivpn"; - version = "1.10.0"; + version = "1.11.0"; in stdenv.mkDerivation { name = "${repo}-${version}"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation { owner = "adrienverge"; inherit repo; rev = "v${version}"; - sha256 = "1d9mp03dxz9j6pwd3d5z2pa7i1sqx5psshli1inqs0cq8zjmbzrw"; + sha256 = "03ljyam0027w412vmi4gc0bp9c2xfmcspi676qck8cvvzg4gf736"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/tools/networking/p2p/amule/default.nix b/pkgs/tools/networking/p2p/amule/default.nix index 2330a97d77d..264c6fd4e16 100644 --- a/pkgs/tools/networking/p2p/amule/default.nix +++ b/pkgs/tools/networking/p2p/amule/default.nix @@ -87,7 +87,7 @@ stdenv.mkDerivation rec { applications. ''; - homepage = "https://amule.org/"; + homepage = "https://github.com/amule-project/amule"; license = licenses.gpl2Plus; maintainers = with maintainers; [ phreedom ]; platforms = platforms.unix; diff --git a/pkgs/tools/networking/pirate-get/default.nix b/pkgs/tools/networking/pirate-get/default.nix index 5d410685c0d..b92d255b719 100644 --- a/pkgs/tools/networking/pirate-get/default.nix +++ b/pkgs/tools/networking/pirate-get/default.nix @@ -4,13 +4,13 @@ with python3Packages; buildPythonApplication rec { pname = "pirate-get"; - version = "0.3.3"; + version = "0.3.4"; doCheck = false; src = fetchPypi { inherit pname version; - sha256 = "1zwfgfiszkca44wlx5p2243hmf8594n7bnfva5if1f69dic6w7mi"; + sha256 = "0f82yf3bl9jaywagv4vvwypm57z1x8a8qqn0xhz9np3949df4ysm"; }; propagatedBuildInputs = [ colorama veryprettytable beautifulsoup4 pyperclip ]; diff --git a/pkgs/tools/networking/shadowsocks-libev/default.nix b/pkgs/tools/networking/shadowsocks-libev/default.nix index 254e5d3e5d3..b6051ef26b0 100644 --- a/pkgs/tools/networking/shadowsocks-libev/default.nix +++ b/pkgs/tools/networking/shadowsocks-libev/default.nix @@ -5,14 +5,14 @@ stdenv.mkDerivation rec { pname = "shadowsocks-libev"; - version = "3.3.1"; + version = "3.3.3"; # Git tag includes CMake build files which are much more convenient. src = fetchFromGitHub { owner = "shadowsocks"; repo = pname; rev = "refs/tags/v${version}"; - sha256 = "0l15mbwlzx446rn5cix9f1726by62807bhnxkzknd41j7r937vyv"; + sha256 = "1i2431imbn4bhwmwyz63g5mh1g5ikhsiwv6mzcdc2kx34zjpibrj"; fetchSubmodules = true; }; diff --git a/pkgs/tools/networking/slirp4netns/default.nix b/pkgs/tools/networking/slirp4netns/default.nix index 83f315706ef..f9add47dd3f 100644 --- a/pkgs/tools/networking/slirp4netns/default.nix +++ b/pkgs/tools/networking/slirp4netns/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "slirp4netns"; - version = "0.4.2"; + version = "0.4.3"; src = fetchFromGitHub { owner = "rootless-containers"; repo = "slirp4netns"; rev = "v${version}"; - sha256 = "0i0rhb7n2i2nmbvdqdx83vi3kw4r17p7p099sr857cr3f3c221qx"; + sha256 = "0g7apfw33wkxxj7qwvlnnhv7qy13s1gkbmvns8612c0yfv9jrsvq"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/tools/networking/subfinder/default.nix b/pkgs/tools/networking/subfinder/default.nix index 65b88a34fb0..cd5f2bf18cb 100644 --- a/pkgs/tools/networking/subfinder/default.nix +++ b/pkgs/tools/networking/subfinder/default.nix @@ -1,16 +1,16 @@ { stdenv, buildGoPackage, fetchFromGitHub }: -buildGoPackage { - pname = "subfinder-git"; - version = "2018-07-15"; +buildGoPackage rec { + pname = "subfinder"; + version = "2.2.4"; - goPackagePath = "github.com/subfinder/subfinder"; + goPackagePath = "github.com/projectdiscovery/subfinder"; src = fetchFromGitHub { - owner = "subfinder"; - repo = "subfinder"; - rev = "26596affed961c535676395f443acc5af95ac9e6"; - sha256 = "0m842jyrwlg4kaja1m3kca07jf20fxva0frg66b13zpsm8hdp10q"; + owner = "projectdiscovery"; + repo = pname; + rev = "v${version}"; + sha256 = "00ni835zvgrj8gmmmpjdszrcijyd6apig8rpb4g2z3g016b6gwar"; }; goDeps = ./deps.nix; @@ -22,8 +22,8 @@ buildGoPackage { subdomains for websites. Designed as a passive framework to be useful for bug bounties and safe for penetration testing. ''; - homepage = https://github.com/subfinder/subfinder; + homepage = "https://github.com/projectdiscovery/subfinder"; license = licenses.mit; - maintainers = with maintainers; [ fpletz ]; + maintainers = with maintainers; [ fpletz filalex77 ]; }; } diff --git a/pkgs/tools/networking/subfinder/deps.nix b/pkgs/tools/networking/subfinder/deps.nix index 34095c81428..16427eddcf6 100644 --- a/pkgs/tools/networking/subfinder/deps.nix +++ b/pkgs/tools/networking/subfinder/deps.nix @@ -1,12 +1,48 @@ # file generated from Gopkg.lock using dep2nix (https://github.com/nixcloud/dep2nix) [ { - goPackagePath = "github.com/bogdanovich/dns_resolver"; + goPackagePath = "github.com/davecgh/go-spew"; fetch = { type = "git"; - url = "https://github.com/bogdanovich/dns_resolver"; - rev = "a8e42bc6a5b6c9a93be01ca204be7e17f7ba4cd2"; - sha256 = "0l1hgxxqafappw0y18sbkkk2vijclvf1b8x73b0nhi4r74wyib49"; + url = "https://github.com/davecgh/go-spew"; + rev = "8991bc29aa16c548c550c7ff78260e27b9ab7c73"; + sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y"; + }; + } + { + goPackagePath = "github.com/json-iterator/go"; + fetch = { + type = "git"; + url = "https://github.com/json-iterator/go"; + rev = "03217c3e97663914aec3faafde50d081f197a0a2"; + sha256 = "1kbp9fj6fxfql0ir59zb6v68l4bpwlmk76xm8vaikw1hp6y9bcss"; + }; + } + { + goPackagePath = "github.com/konsorten/go-windows-terminal-sequences"; + fetch = { + type = "git"; + url = "https://github.com/konsorten/go-windows-terminal-sequences"; + rev = "f55edac94c9bbba5d6182a4be46d86a2c9b5b50e"; + sha256 = "09mn209ika7ciy87xf2x31dq5fnqw39jidgaljvmqxwk7ff1hnx7"; + }; + } + { + goPackagePath = "github.com/logrusorgru/aurora"; + fetch = { + type = "git"; + url = "https://github.com/logrusorgru/aurora"; + rev = "21d75270181e0436fee7bd58b991c212cf309068"; + sha256 = "0vc9qdl6jzq7vazfqgz628gcgsvir56bdi2bkhl54pi92cz9cw0p"; + }; + } + { + goPackagePath = "github.com/m-mizutani/urlscan-go"; + fetch = { + type = "git"; + url = "https://github.com/m-mizutani/urlscan-go"; + rev = "21d37c8d3d34d514f2ef49db9b59cc94f335e9c3"; + sha256 = "1hpymd4ncp78hgpksnw8k27rp0lh832x1pyk3bhj5dm6xmh79g4c"; }; } { @@ -14,17 +50,71 @@ fetch = { type = "git"; url = "https://github.com/miekg/dns"; - rev = "3e6e47bc11bc7f93f9e2f1c7bd6481ba4802808b"; - sha256 = "1vmsnv6r799z5lz5g9l2dh065m9003yfjb18w8n6c053hp8jvrfm"; + rev = "1e224ff5dead8366ed6fcdcb832794be42e73f0e"; + sha256 = "1iv9jznakz8f5swiir0z4zilr9ypavnsc0g4zi1r0vad6npy7zfl"; + }; + } + { + goPackagePath = "github.com/modern-go/concurrent"; + fetch = { + type = "git"; + url = "https://github.com/modern-go/concurrent"; + rev = "bacd9c7ef1dd9b15be4a9909b8ac7a4e313eec94"; + sha256 = "0s0fxccsyb8icjmiym5k7prcqx36hvgdwl588y0491gi18k5i4zs"; }; } { - goPackagePath = "github.com/subfinder/urlx"; + goPackagePath = "github.com/modern-go/reflect2"; fetch = { type = "git"; - url = "https://github.com/subfinder/urlx"; - rev = "8e731c8be06edbae81cab15937cd3c291c2a7680"; - sha256 = "11vrx1c0mq1h6lwpsvibd3386wy4kirzmmm8ibrlx2gj0h6pkkcb"; + url = "https://github.com/modern-go/reflect2"; + rev = "4b7aa43c6742a2c18fdef89dd197aaae7dac7ccd"; + sha256 = "1721y3yr3dpx5dx5ashf063qczk2awy5zjir1jvp1h5hn7qz4i49"; + }; + } + { + goPackagePath = "github.com/pkg/errors"; + fetch = { + type = "git"; + url = "https://github.com/pkg/errors"; + rev = "ba968bfe8b2f7e042a574c888954fccecfa385b4"; + sha256 = "0g5qcb4d4fd96midz0zdk8b9kz8xkzwfa8kr1cliqbg8sxsy5vd1"; + }; + } + { + goPackagePath = "github.com/pmezard/go-difflib"; + fetch = { + type = "git"; + url = "https://github.com/pmezard/go-difflib"; + rev = "792786c7400a136282c1664665ae0a8db921c6c2"; + sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw"; + }; + } + { + goPackagePath = "github.com/rs/xid"; + fetch = { + type = "git"; + url = "https://github.com/rs/xid"; + rev = "15d26544def341f036c5f8dca987a4cbe575032c"; + sha256 = "1vgw1dikqw273awcci6pzifs7shkl5ah4l88j1zjbnpgbiwzlx9j"; + }; + } + { + goPackagePath = "github.com/sirupsen/logrus"; + fetch = { + type = "git"; + url = "https://github.com/sirupsen/logrus"; + rev = "839c75faf7f98a33d445d181f3018b5c3409a45e"; + sha256 = "087k2lxrr9p9dh68yw71d05h5g9p5v26zbwd6j7lghinjfaw334x"; + }; + } + { + goPackagePath = "github.com/stretchr/testify"; + fetch = { + type = "git"; + url = "https://github.com/stretchr/testify"; + rev = "221dbe5ed46703ee255b1da0dec05086f5035f62"; + sha256 = "187i5g88sxfy4vxpm7dw1gwv29pa2qaq475lxrdh5livh69wqfjb"; }; } { @@ -32,8 +122,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/crypto"; - rev = "a49355c7e3f8fe157a85be2f77e6e269a0f89602"; - sha256 = "020q1laxjx5kcmnqy4wmdb63zhb0lyq6wpy40axhswzg2nd21s44"; + rev = "86a70503ff7e82ffc18c7b0de83db35da4791e6a"; + sha256 = "0w7ih86lmll9gs2j0z3nmmy148i2yism9z53yp58zwa6d5pjahfn"; }; } { @@ -41,8 +131,35 @@ fetch = { type = "git"; url = "https://go.googlesource.com/net"; - rev = "d0887baf81f4598189d4e12a37c6da86f0bba4d0"; - sha256 = "00dmz9a5d3myyb0256b33vf1bk8wv1khhh88kcvbmqsfd6x1n6p5"; + rev = "5ee1b9f4859acd2e99987ef94ec7a58427c53bef"; + sha256 = "0jvzqv6phv64rw4pj86x3j9kp5yx9p34fd38r46rb9464h69ba29"; + }; + } + { + goPackagePath = "golang.org/x/sys"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sys"; + rev = "ce4227a45e2eb77e5c847278dcc6a626742e2945"; + sha256 = "1s43wvqfml6ml5ks7iv2bis9d664g77mq86v7mfmjhn56x856g35"; + }; + } + { + goPackagePath = "gopkg.in/yaml.v2"; + fetch = { + type = "git"; + url = "https://github.com/go-yaml/yaml"; + rev = "1f64d6156d11335c3f22d9330b0ad14fc1e789ce"; + sha256 = "0k5xcwkd3wmcx54isk7ck9cwp8fapfhyqdz3f13kxp77cxqizazj"; + }; + } + { + goPackagePath = "gopkg.in/yaml.v3"; + fetch = { + type = "git"; + url = "https://github.com/go-yaml/yaml"; + rev = "4206685974f28e3178b35fa198a59899aa4dee3a"; + sha256 = "1ff5fd8x45cay9100ds63hxd32s7czsrric0ql6a1jrxczsgqk1g"; }; } ] diff --git a/pkgs/tools/networking/unbound/default.nix b/pkgs/tools/networking/unbound/default.nix index 08e2e07581b..18d9defdd94 100644 --- a/pkgs/tools/networking/unbound/default.nix +++ b/pkgs/tools/networking/unbound/default.nix @@ -34,6 +34,10 @@ stdenv.mkDerivation rec { installFlags = [ "configfile=\${out}/etc/unbound/unbound.conf" ]; + postInstall = '' + make unbound-event-install + ''; + preFixup = stdenv.lib.optionalString (stdenv.isLinux && !stdenv.hostPlatform.isMusl) # XXX: revisit # Build libunbound again, but only against nettle instead of openssl. # This avoids gnutls.out -> unbound.lib -> openssl.out. diff --git a/pkgs/tools/networking/wireguard-tools/default.nix b/pkgs/tools/networking/wireguard-tools/default.nix index d5edb128cd5..8133e2a5a54 100644 --- a/pkgs/tools/networking/wireguard-tools/default.nix +++ b/pkgs/tools/networking/wireguard-tools/default.nix @@ -14,11 +14,11 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "wireguard-tools"; - version = "0.0.20191127"; + version = "0.0.20191219"; src = fetchzip { url = "https://git.zx2c4.com/WireGuard/snapshot/WireGuard-${version}.tar.xz"; - sha256 = "1n1x5858c32p0a13rrhn9a491174k5z4wd0gsy8qn546k1a8qj99"; + sha256 = "1qxpjvj3927xdly022rp2sndbifmr0c2y6ik77v43k95ch94716d"; }; sourceRoot = "source/src/tools"; diff --git a/pkgs/tools/package-management/cargo-edit/default.nix b/pkgs/tools/package-management/cargo-edit/default.nix index 1cdcffd2e7b..0adc2add96d 100644 --- a/pkgs/tools/package-management/cargo-edit/default.nix +++ b/pkgs/tools/package-management/cargo-edit/default.nix @@ -1,39 +1,28 @@ { stdenv, lib, darwin , rustPlatform, fetchFromGitHub -, openssl, pkgconfig }: +, openssl, pkg-config, libiconv }: rustPlatform.buildRustPackage rec { pname = "cargo-edit"; - version = "0.4.1"; + version = "0.4.2"; src = fetchFromGitHub { owner = "killercup"; repo = pname; rev = "v${version}"; - sha256 = "087l8qdwfnnklw6zyjwflxh7hyhh4r7wala36cc4lrj7lag2xm9n"; + sha256 = "0y0sq0kll6bg0qrfdyas8rcx5dj50j9f05qx244kv7vqxp2q25jq"; }; - cargoSha256 = "1ih1p9jdwr1ymq2p6ipz6rybi17f3qn65kn4bqkgzx36afvpnd5l"; + cargoSha256 = "0prd53p20cha2y2qp8dmq0ywd32f6jm8mszdkbi4x606dj9bcgbl"; - nativeBuildInputs = lib.optional (!stdenv.isDarwin) pkgconfig; - buildInputs = lib.optional (!stdenv.isDarwin) openssl; - propagatedBuildInputs = lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Security; - - patches = [ - # https://github.com/killercup/cargo-edit/pull/362 - ./no_upgrade_index_in_tests.patch - ]; - - # The default `/build` will fail the test (seems) due to permission problem. - preCheck = '' - export TMPDIR="/tmp" - ''; + nativeBuildInputs = [ pkg-config ]; + buildInputs = [ openssl ] ++ lib.optionals stdenv.isDarwin [ libiconv darwin.apple_sdk.frameworks.Security ]; meta = with lib; { description = "A utility for managing cargo dependencies from the command line"; homepage = https://github.com/killercup/cargo-edit; license = with licenses; [ mit ]; - maintainers = with maintainers; [ gerschtli jb55 ]; + maintainers = with maintainers; [ gerschtli jb55 filalex77 ]; platforms = platforms.all; }; } diff --git a/pkgs/tools/package-management/cargo-edit/no_upgrade_index_in_tests.patch b/pkgs/tools/package-management/cargo-edit/no_upgrade_index_in_tests.patch deleted file mode 100644 index 56b216e7baa..00000000000 --- a/pkgs/tools/package-management/cargo-edit/no_upgrade_index_in_tests.patch +++ /dev/null @@ -1,123 +0,0 @@ -diff --git a/src/bin/add/main.rs b/src/bin/add/main.rs -index 41cde585..848612b3 100644 ---- a/src/bin/add/main.rs -+++ b/src/bin/add/main.rs -@@ -87,7 +87,7 @@ fn handle_add(args: &Args) -> Result<()> { - let mut manifest = Manifest::open(manifest_path)?; - let deps = &args.parse_dependencies()?; - -- if !args.offline { -+ if !args.offline && std::env::var("CARGO_IS_TEST").is_err() { - let url = registry_url( - &find(&manifest_path)?, - args.registry.as_ref().map(String::as_ref), -diff --git a/src/bin/upgrade/main.rs b/src/bin/upgrade/main.rs -index cf2414da..c066e6f4 100644 ---- a/src/bin/upgrade/main.rs -+++ b/src/bin/upgrade/main.rs -@@ -409,7 +409,7 @@ fn process(args: Args) -> Result<()> { - .. - } = args; - -- if !args.offline && !to_lockfile { -+ if !args.offline && !to_lockfile && std::env::var("CARGO_IS_TEST").is_err() { - let url = registry_url(&find(&manifest_path)?, None)?; - update_registry_index(&url)?; - } -@@ -427,7 +427,7 @@ fn process(args: Args) -> Result<()> { - - // Update indices for any alternative registries, unless - // we're offline. -- if !args.offline { -+ if !args.offline && std::env::var("CARGO_IS_TEST").is_err() { - for registry_url in existing_dependencies - .0 - .values() -diff --git a/tests/cargo-add.rs b/tests/cargo-add.rs -index fbdbf4e2..612ffa78 100644 ---- a/tests/cargo-add.rs -+++ b/tests/cargo-add.rs -@@ -1184,6 +1184,7 @@ fn add_prints_message() { - "--vers=0.6.0", - &format!("--manifest-path={}", manifest), - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .succeeds() - .and() - .stdout() -@@ -1204,6 +1205,7 @@ fn add_prints_message_with_section() { - "--vers=0.1.0", - &format!("--manifest-path={}", manifest), - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .succeeds() - .and() - .stdout() -@@ -1224,6 +1226,7 @@ fn add_prints_message_for_dev_deps() { - "0.8.0", - &format!("--manifest-path={}", manifest), - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .succeeds() - .and() - .stdout() -@@ -1244,6 +1247,7 @@ fn add_prints_message_for_build_deps() { - "0.1.0", - &format!("--manifest-path={}", manifest), - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .succeeds() - .and() - .stdout() -diff --git a/tests/cargo-upgrade.rs b/tests/cargo-upgrade.rs -index b11a88dc..cf117940 100644 ---- a/tests/cargo-upgrade.rs -+++ b/tests/cargo-upgrade.rs -@@ -385,6 +385,7 @@ fn upgrade_workspace() { - - /// Detect if attempting to run against a workspace root and give a helpful warning. - #[test] -+#[cfg(feature = "test-external-apis")] - fn detect_workspace() { - let (_tmpdir, root_manifest, _workspace_manifests) = copy_workspace_test(); - -@@ -414,6 +415,7 @@ fn invalid_manifest() { - "--manifest-path", - &manifest, - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .fails_with(1) - .and() - .stderr() -@@ -442,6 +444,7 @@ fn invalid_root_manifest() { - "--manifest-path", - &manifest, - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .fails_with(1) - .and() - .stderr() -@@ -457,6 +460,7 @@ fn unknown_flags() { - "foo", - "--flag", - ]) -+ .with_env(&[("CARGO_IS_TEST", "1")]) - .fails_with(1) - .and() - .stderr() -@@ -473,6 +477,7 @@ For more information try --help ", - - // Verify that an upgraded Cargo.toml matches what we expect. - #[test] -+#[cfg(feature = "test-external-apis")] - fn upgrade_to_lockfile() { - let (tmpdir, manifest) = clone_out_test("tests/fixtures/upgrade/Cargo.toml.lockfile_source"); - fs::copy( -@@ -489,6 +494,7 @@ fn upgrade_to_lockfile() { - } - - #[test] -+#[cfg(feature = "test-external-apis")] - fn upgrade_workspace_to_lockfile() { - let (tmpdir, root_manifest, _workspace_manifests) = copy_workspace_test(); - \ No newline at end of file diff --git a/pkgs/tools/package-management/cargo-license/add-Cargo.lock.patch b/pkgs/tools/package-management/cargo-license/add-Cargo.lock.patch index 7137f8b7fb1..c6c4e3f62e1 100644 --- a/pkgs/tools/package-management/cargo-license/add-Cargo.lock.patch +++ b/pkgs/tools/package-management/cargo-license/add-Cargo.lock.patch @@ -1,15 +1,9 @@ -commit ed7cd525d00a0f8517894cfec6e3e277f630b15f -Author: Bas van Dijk <v.dijk.bas@gmail.com> -Date: Mon Jun 24 00:13:13 2019 +0200 - - Add Cargo.lock - diff --git a/Cargo.lock b/Cargo.lock new file mode 100644 -index 0000000..b552c16 +index 0000000..20311b5 --- /dev/null +++ b/Cargo.lock -@@ -0,0 +1,285 @@ +@@ -0,0 +1,429 @@ +# This file is automatically @generated by Cargo. +# It is not intended for manual editing. +[[package]] @@ -18,122 +12,169 @@ index 0000000..b552c16 +source = "registry+https://github.com/rust-lang/crates.io-index" + +[[package]] -+name = "autocfg" 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"ce4b6baddc94b77a155abbb5a4fa4d3b31a45598"; - sha256 = "0x00vn0ldnm2hvndfmq4g4q5w6axyg9vsri3i5zxhmir7423xabp"; + rev = "v${version}"; + sha256 = "02gsarwm4gjkr9m4sfbjwp37xmqhch8qpyy027bxqkg8iyipxm69"; }; - cargoSha256 = "1xqii2z0asgkwn1ny9n19w7d4sjz12a6i55x2pf4cfrciapdpvdl"; + cargoPatches = [ ./cargo-lock.patch ]; + cargoSha256 = "1ywmrvkwwwwh99l4j8vc4cyk8qjd0jx8hn68yr2h31ya1bzcqbd1"; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ openssl ] @@ -26,6 +27,6 @@ rustPlatform.buildRustPackage rec { homepage = https://github.com/kbknapp/cargo-outdated; license = with licenses; [ asl20 /* or */ mit ]; platforms = platforms.all; - maintainers = [ maintainers.sondr3 ]; + maintainers = with maintainers; [ sondr3 ivan ]; }; } diff --git a/pkgs/tools/package-management/cargo-outdated/update-cargo-lock.sh b/pkgs/tools/package-management/cargo-outdated/update-cargo-lock.sh new file mode 100755 index 00000000000..21ee27c59b7 --- /dev/null +++ b/pkgs/tools/package-management/cargo-outdated/update-cargo-lock.sh @@ -0,0 +1,18 @@ +#!/bin/sh + +# This updates cargo-lock.patch for the cargo-outdated version listed in default.nix. + +set -eu -o verbose + +here=$PWD +version=$(cat default.nix | grep '^ version = "' | cut -d '"' -f 2) +checkout=$(mktemp -d) +git clone -b "v$version" --depth=1 https://github.com/kbknapp/cargo-outdated "$checkout" +cd "$checkout" + +cargo generate-lockfile +git add -f Cargo.lock +git diff HEAD -- Cargo.lock > "$here"/cargo-lock.patch + +cd "$here" +rm -rf "$checkout" diff --git a/pkgs/tools/package-management/cargo-tree/default.nix b/pkgs/tools/package-management/cargo-tree/default.nix index 8c3035ae79a..add08c50fcc 100644 --- a/pkgs/tools/package-management/cargo-tree/default.nix +++ b/pkgs/tools/package-management/cargo-tree/default.nix @@ -1,17 +1,16 @@ { stdenv, lib, rustPlatform, fetchFromGitHub, pkgconfig, cmake, curl, libiconv, darwin }: rustPlatform.buildRustPackage rec { pname = "cargo-tree"; - version = "0.26.0"; + version = "0.27.0"; src = fetchFromGitHub { owner = "sfackler"; repo = "cargo-tree"; - rev = "v${version}"; - - sha256 = "12z0sa7g79x46q2ybpy6i9rf1x4cnwajw8dsjzra2qhssyp8rp9c"; + rev = "37030742fbf83106707525913ab6c4c3c701cd0e"; + sha256 = "1mi52n02j9dmi19af6js0vmmqnl8rf4zxind3cxh401530cd8ml4"; }; - cargoSha256 = "0ibmgyiqa53m9xfvl726w1sq37lbdp7vzyc76gwcp1zvzkcv2860"; + cargoSha256 = "12p9dqlxa1b1sx8572w7hj0rlkkpv3k440pffdyjgyx4s1r9m0s0"; nativeBuildInputs = [ pkgconfig cmake ]; buildInputs = [ curl ] ++ lib.optionals stdenv.isDarwin [ libiconv darwin.apple_sdk.frameworks.Security ]; @@ -20,5 +19,6 @@ rustPlatform.buildRustPackage rec { description = "A cargo subcommand that visualizes a crate's dependency graph in a tree-like format"; license = with licenses; [ asl20 mit ]; maintainers = with maintainers; [ jD91mZM2 ]; + homepage = "https://crates.io/crates/cargo-tree"; }; } diff --git a/pkgs/tools/package-management/emplace/default.nix b/pkgs/tools/package-management/emplace/default.nix index 614959b651c..67829330844 100644 --- a/pkgs/tools/package-management/emplace/default.nix +++ b/pkgs/tools/package-management/emplace/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "emplace"; - version = "0.2.7"; + version = "0.2.8"; src = fetchFromGitHub { owner = "tversteeg"; repo = pname; rev = "v${version}"; - sha256 = "0dkdgb0hbaixc69yh75lq4lamvgd421lk1v7qn802h83fibcmh81"; + sha256 = "0s04hi0i1ssg9dp75f9qdglnvqmh0cxmbk8nnhd4w45v9m5sadph"; }; cargoSha256 = "10y7lpgj9mxrh3rmc15km4rfzspwdjr8dcdh0747rjn6dcpfhcdq"; diff --git a/pkgs/tools/security/aws-okta/default.nix b/pkgs/tools/security/aws-okta/default.nix index 9067e6a4dbf..f960245e2b3 100644 --- a/pkgs/tools/security/aws-okta/default.nix +++ b/pkgs/tools/security/aws-okta/default.nix @@ -1,4 +1,4 @@ -{ buildGoPackage, fetchFromGitHub, libusb1, pkgconfig, stdenv }: +{ buildGoPackage, fetchFromGitHub, libusb1, pkgconfig, stdenv, libiconv }: buildGoPackage rec { pname = "aws-okta"; @@ -18,14 +18,13 @@ buildGoPackage rec { buildFlags = "--tags release"; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ libusb1 ]; + buildInputs = [ libusb1 libiconv ]; meta = with stdenv.lib; { inherit version; description = "aws-vault like tool for Okta authentication"; license = licenses.mit; maintainers = [maintainers.imalsogreg]; - broken = stdenv.isDarwin; # test with CoreFoundation 10.11 platforms = platforms.all; homepage = https://github.com/segmentio/aws-okta; downloadPage = "https://github.com/segmentio/aws-okta"; diff --git a/pkgs/tools/security/bruteforce-luks/default.nix b/pkgs/tools/security/bruteforce-luks/default.nix index 0c650781bda..cfa27a5c686 100644 --- a/pkgs/tools/security/bruteforce-luks/default.nix +++ b/pkgs/tools/security/bruteforce-luks/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "bruteforce-luks"; - version = "1.3.2"; + version = "1.4.0"; src = fetchFromGitHub { - sha256 = "0ws5bm5pczhvqrlhl60h8a9rdwk6xlh9wr5ndnkyxvv7m90qpy9b"; + sha256 = "0yyrda077avdapq1mvavgv5mvj2r94d6p01q56bbnaq4a3h5kfd6"; rev = version; repo = "bruteforce-luks"; owner = "glv2"; diff --git a/pkgs/tools/security/chaps/default.nix b/pkgs/tools/security/chaps/default.nix index e81567c3ed8..c8ee9506968 100644 --- a/pkgs/tools/security/chaps/default.nix +++ b/pkgs/tools/security/chaps/default.nix @@ -1,9 +1,10 @@ -{ stdenv, fetchgit, fetchurl, trousers, leveldb, unzip, scons, pkgconfig -, glib, dbus_cplusplus, dbus, protobuf, openssl, snappy, pam }: +{ stdenv, fetchFromGitiles, fetchFromGitHub, fetchurl, trousers, leveldb, unzip +, scons, pkgconfig, glib, dbus_cplusplus, dbus, protobuf, openssl, snappy, pam +}: let - src_chromebase = fetchgit { - url = "https://chromium.googlesource.com/chromium/src/base.git"; + src_chromebase = fetchFromGitiles { + url = "https://chromium.googlesource.com/chromium/src/base"; rev = "2dfe404711e15e24e79799516400c61b2719d7af"; sha256 = "2bd93a3ace4b6767db2c1bd1e16f426c97b8d2133a9cb15f8372b2516cfa65c5"; }; @@ -13,7 +14,7 @@ let sha256 = "0nq98cpnv2jsx2byp4ilam6kydcnziflkc16ikydajmp4mcvpz16"; }; - src_platform2 = fetchgit { + src_platform2 = fetchFromGitiles { url = "https://chromium.googlesource.com/chromiumos/platform2"; rev = "e999e989eaa71c3db7314fc7b4e20829b2b5473b"; sha256 = "15n1bsv6r7cny7arx0hdb223xzzbk7vkxg2r7xajhl4nsj39adjh"; @@ -25,8 +26,9 @@ stdenv.mkDerivation rec { name = "chaps-0.42-6812"; version = "0.42-6812"; - src = fetchgit { - url = "https://github.com/google/chaps-linux"; + src = fetchFromGitHub { + owner = "google"; + repo = "chaps-linux"; rev = "989aadc45cdb216ca35b0c97d13fc691576fa1d7"; sha256 = "0chk6pnn365d5kcz6vfqx1d0383ksk97icc0lzg0vvb0kvyj0ff1"; }; diff --git a/pkgs/tools/security/enchive/default.nix b/pkgs/tools/security/enchive/default.nix index baada40a6cb..7e45ab76ed0 100644 --- a/pkgs/tools/security/enchive/default.nix +++ b/pkgs/tools/security/enchive/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "enchive"; - version = "3.4"; + version = "3.5"; src = fetchFromGitHub { owner = "skeeto"; repo = "enchive"; rev = version; - sha256 = "0ssxbnsjx4mvaqimp5nzfixpxinhmi12z8lxdd8cj2361wbb54yk"; + sha256 = "0fdrfc5l42lj2bvmv9dmkmhmm7qiszwk7cmdvnqad3fs7652g0qa"; }; makeFlags = ["PREFIX=$(out)"]; diff --git a/pkgs/tools/security/ghidra/default.nix b/pkgs/tools/security/ghidra/default.nix index d68fd5e7e92..b3773725e6e 100644 --- a/pkgs/tools/security/ghidra/default.nix +++ b/pkgs/tools/security/ghidra/default.nix @@ -1,16 +1,26 @@ { stdenv, fetchurl, unzip, lib, makeWrapper, autoPatchelfHook -, openjdk11, pam +, openjdk11, pam, makeDesktopItem, icoutils }: let pkg_path = "$out/lib/ghidra"; + desktopItem = makeDesktopItem { + name = "ghidra"; + exec = "ghidra"; + icon = "ghidra"; + desktopName = "Ghidra"; + genericName = "Ghidra Software Reverse Engineering Suite"; + categories = "Development;"; + }; + + in stdenv.mkDerivation { - name = "ghidra-9.0.4"; + name = "ghidra-9.1"; src = fetchurl { - url = https://ghidra-sre.org/ghidra_9.0.4_PUBLIC_20190516.zip; - sha256 = "1gqqxk57hswwgr97qisqivcfgjdxjipfdshyh4r76dyrfpa0q3d5"; + url = https://ghidra-sre.org/ghidra_9.1_PUBLIC_20191023.zip; + sha256 = "0pl7s59008gvgwz4mxp7rz3xr3vaa12a6s5zvx2yr9jxx3gk1l99"; }; nativeBuildInputs = [ @@ -22,13 +32,24 @@ in stdenv.mkDerivation { buildInputs = [ stdenv.cc.cc.lib pam + icoutils ]; dontStrip = true; installPhase = '' mkdir -p "${pkg_path}" + mkdir -p "${pkg_path}" "$out/share/applications" cp -a * "${pkg_path}" + ln -s ${desktopItem}/share/applications/* $out/share/applications + + icotool -x "${pkg_path}/support/ghidra.ico" + rm ghidra_4_40x40x32.png + for f in ghidra_*.png; do + res=$(basename "$f" ".png" | cut -d"_" -f3 | cut -d"x" -f1-2) + mkdir -pv "$out/share/icons/hicolor/$res/apps" + mv "$f" "$out/share/icons/hicolor/$res/apps/ghidra.png" + done; ''; postFixup = '' diff --git a/pkgs/tools/security/gnupg/22.nix b/pkgs/tools/security/gnupg/22.nix index 0be7b936bb7..9aa92fd6829 100644 --- a/pkgs/tools/security/gnupg/22.nix +++ b/pkgs/tools/security/gnupg/22.nix @@ -16,11 +16,11 @@ assert guiSupport -> pinentry != null && enableMinimal == false; stdenv.mkDerivation rec { pname = "gnupg"; - version = "2.2.18"; + version = "2.2.19"; src = fetchurl { url = "mirror://gnupg/gnupg/${pname}-${version}.tar.bz2"; - sha256 = "02pcdmb9p4a8hil88gyd86mnc85jldss3cl02jvbkcjmrbi7rlrh"; + sha256 = "1h6yx6sdpz3lf9gdppgxqcf73baynr8gflmh43286fkgw3058994"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; diff --git a/pkgs/tools/security/jd-gui/default.nix b/pkgs/tools/security/jd-gui/default.nix index 213f7c30051..86b88638bd7 100644 --- a/pkgs/tools/security/jd-gui/default.nix +++ b/pkgs/tools/security/jd-gui/default.nix @@ -1,22 +1,27 @@ -{ stdenv, fetchurl, gradle_2_5, perl, makeWrapper, jre, makeDesktopItem, writeText, runtimeShell }: +{ stdenv, fetchFromGitHub, jre, jdk, makeDesktopItem, perl, writeText, runtimeShell }: let - version = "1.4.0"; - name = "jd-gui-${version}"; - - src = fetchurl { - url = "https://github.com/java-decompiler/jd-gui/archive/v${version}.tar.gz"; - sha256 = "0anz7szlr5kgmsmkyv34jdynsnk8v6kvibcyz98jsd96fh725lax"; + pname = "jd-gui"; + version = "1.6.5"; + + src = fetchFromGitHub { + owner = "java-decompiler"; + repo = pname; + rev = "v${version}"; + sha256 = "0yn2xcwznig941pw2f3wi8ixz1wprxcn9wl0g2ggdzx51rfwgzzi"; }; deps = stdenv.mkDerivation { - name = "${name}-deps"; + name = "${pname}-deps"; inherit src; - nativeBuildInputs = [ gradle_2_5 perl ]; + + nativeBuildInputs = [ jdk perl ]; + + patchPhase = "patchShebangs gradlew"; buildPhase = '' export GRADLE_USER_HOME=$(mktemp -d); - gradle --no-daemon build + ./gradlew --no-daemon jar ''; # Mavenize dependency paths @@ -25,11 +30,12 @@ let find $GRADLE_USER_HOME/caches/modules-2 -type f -regex '.*\.\(jar\|pom\)' \ | perl -pe 's#(.*/([^/]+)/([^/]+)/([^/]+)/[0-9a-f]{30,40}/([^/\s]+))$# ($x = $2) =~ tr|\.|/|; "install -Dm444 $1 \$out/$x/$3/$4/$5" #e' \ | sh + cp -r $GRADLE_USER_HOME/wrapper $out ''; outputHashAlgo = "sha256"; outputHashMode = "recursive"; - outputHash = "1apmqiphnav79m4rdii58h7f4qslpfig4qybyyl2fr7zk92gv3l9"; + outputHash = "1s4p91iiyikrsgvpzkhw3jm5lsm0jpzp7iw7afdhhl9jm18igs70"; }; # Point to our local deps repo @@ -59,18 +65,24 @@ let comment = "Java Decompiler JD-GUI"; desktopName = "JD-GUI"; genericName = "Java Decompiler"; - mimeType = "application/x-java-archive;application/x-java"; + mimeType = "application/java;application/java-vm;application/java-archive"; categories = "Development;Debugger;"; + extraEntries="StartupWMClass=org-jd-gui-App"; }; -in stdenv.mkDerivation { - inherit name version src; +in stdenv.mkDerivation rec { + inherit pname version src; + name = "${pname}-${version}"; - nativeBuildInputs = [ gradle_2_5 perl makeWrapper ]; + nativeBuildInputs = [ jdk ]; + + patchPhase = "patchShebangs gradlew"; buildPhase = '' export GRADLE_USER_HOME=$(mktemp -d) - gradle --offline --no-daemon --info --init-script ${gradleInit} jar + cp -r ${deps}/wrapper $GRADLE_USER_HOME + chmod u+w $GRADLE_USER_HOME/wrapper/dists/gradle*/*/*.lck + ./gradlew --offline --no-daemon --info --init-script ${gradleInit} jar ''; installPhase = let @@ -83,18 +95,16 @@ in stdenv.mkDerivation { cat > $out/bin/jd-gui <<EOF #!${runtimeShell} export JAVA_HOME=${jre} - ${jre}/bin/java -jar ${jar} $@ + exec ${jre}/bin/java -jar ${jar} "\$@" EOF chmod +x $out/bin/jd-gui ${(desktopItem "$out/bin/jd-gui").buildCommand} ''; - dontStrip = true; - meta = with stdenv.lib; { description = "Fast Java Decompiler with powerful GUI"; - homepage = "http://jd.benow.ca/"; + homepage = "https://java-decompiler.github.io/"; license = licenses.gpl3; platforms = platforms.unix; maintainers = [ maintainers.thoughtpolice ]; diff --git a/pkgs/tools/security/john/default.nix b/pkgs/tools/security/john/default.nix index fd5659e7f9d..17e02e736dc 100644 --- a/pkgs/tools/security/john/default.nix +++ b/pkgs/tools/security/john/default.nix @@ -31,7 +31,10 @@ stdenv.mkDerivation rec { export AS=$CC export LD=$CC ''; - configureFlags = [ "--disable-native-macro" ]; + configureFlags = [ + "--disable-native-tests" + "--with-systemwide" + ]; buildInputs = [ openssl nss nspr kerberos gmp zlib libpcap re2 ]; nativeBuildInputs = [ gcc python3Packages.wrapPython perl makeWrapper ]; @@ -44,8 +47,6 @@ stdenv.mkDerivation rec { # gcc: error: memdbg.o: No such file or directory enableParallelBuilding = false; - NIX_CFLAGS_COMPILE = [ "-DJOHN_SYSTEMWIDE=1" ]; - postInstall = '' mkdir -p "$out/bin" "$out/etc/john" "$out/share/john" "$out/share/doc/john" "$out/share/john/rules" find -L ../run -mindepth 1 -maxdepth 1 -type f -executable \ @@ -68,7 +69,7 @@ stdenv.mkDerivation rec { description = "John the Ripper password cracker"; license = licenses.gpl2; homepage = https://github.com/magnumripper/JohnTheRipper/; - maintainers = with maintainers; [ offline ]; - platforms = [ "x86_64-linux" "x86_64-darwin"]; + maintainers = with maintainers; [ offline matthewbauer ]; + platforms = platforms.unix; }; } diff --git a/pkgs/tools/security/keybase/fix-paths-kbfs.patch b/pkgs/tools/security/keybase/fix-paths-kbfs.patch deleted file mode 100644 index 1180f38b865..00000000000 --- a/pkgs/tools/security/keybase/fix-paths-kbfs.patch +++ /dev/null @@ -1,48 +0,0 @@ -diff --git a/go/kbfs/libfuse/mounter.go b/go/kbfs/libfuse/mounter.go -index d791ffc2..b116ad5d 100644 ---- a/go/kbfs/libfuse/mounter.go -+++ b/go/kbfs/libfuse/mounter.go -@@ -108,7 +108,7 @@ func (m *mounter) Unmount() (err error) { - case "darwin": - _, err = exec.Command("/sbin/umount", dir).Output() - case "linux": -- fusermountOutput, fusermountErr := exec.Command("fusermount", "-u", dir).CombinedOutput() -+ fusermountOutput, fusermountErr := exec.Command("@fusermount@", "-u", dir).CombinedOutput() - // Only clean up mountdir on a clean unmount. - if fusermountErr == nil { - m.log.Info("Successfully unmounted") -@@ -135,7 +135,7 @@ func (m *mounter) Unmount() (err error) { - "/usr/sbin/diskutil", "unmountDisk", "force", dir).Output() - case "linux": - // Lazy unmount; will unmount when KBFS is no longer in use. -- _, err = exec.Command("fusermount", "-u", "-z", dir).Output() -+ _, err = exec.Command("@fusermount@", "-u", "-z", dir).Output() - default: - err = errors.New("Forced unmount is not supported on this platform yet") - } -diff --git a/go/vendor/bazil.org/fuse/mount_linux.go b/go/vendor/bazil.org/fuse/mount_linux.go -index ec7fd89c..4d0a9e30 100644 ---- a/go/vendor/bazil.org/fuse/mount_linux.go -+++ b/go/vendor/bazil.org/fuse/mount_linux.go -@@ -196,7 +196,7 @@ func mount(dir string, conf *mountConfig, ready chan<- struct{}, _ *error) (fuse - defer readFile.Close() - - cmd := exec.Command( -- "fusermount", -+ "@fusermount@", - "-o", conf.getOptions(), - "--", - dir, -diff --git a/go/vendor/bazil.org/fuse/unmount_linux.go b/go/vendor/bazil.org/fuse/unmount_linux.go -index f02448af..6e4c6c23 100644 ---- a/go/vendor/bazil.org/fuse/unmount_linux.go -+++ b/go/vendor/bazil.org/fuse/unmount_linux.go -@@ -21,7 +21,7 @@ func unmount(dir string) error { - return sysunix.Unmount(dir, sysunix.MNT_DETACH) - } - -- cmd := exec.Command("fusermount", "-u", dir) -+ cmd := exec.Command("@fusermount@", "-u", dir) - output, err := cmd.CombinedOutput() - if err != nil { - if len(output) > 0 { diff --git a/pkgs/tools/security/keybase/kbfs.nix b/pkgs/tools/security/keybase/kbfs.nix index 93c7bd540d8..9448182a65a 100644 --- a/pkgs/tools/security/keybase/kbfs.nix +++ b/pkgs/tools/security/keybase/kbfs.nix @@ -1,4 +1,4 @@ -{ stdenv, substituteAll, buildGoPackage, fetchFromGitHub, fuse, osxfuse, keybase }: +{ stdenv, buildGoPackage, fetchFromGitHub, keybase }: buildGoPackage { pname = "kbfs"; @@ -10,13 +10,6 @@ buildGoPackage { dontRenameImports = true; - patches = [ - (substituteAll { - src = ./fix-paths-kbfs.patch; - fusermount = "${fuse}/bin/fusermount"; - }) - ]; - buildFlags = [ "-tags production" ]; meta = with stdenv.lib; { diff --git a/pkgs/tools/security/ripasso/cursive.nix b/pkgs/tools/security/ripasso/cursive.nix index 9eac6b6e5ca..b273b882daf 100644 --- a/pkgs/tools/security/ripasso/cursive.nix +++ b/pkgs/tools/security/ripasso/cursive.nix @@ -1,30 +1,37 @@ -{ stdenv, lib, rustPlatform, fetchFromGitHub, pkgconfig, ncurses, python3, openssl, libgpgerror, gpgme, xorg }: +{ stdenv, lib, rustPlatform, fetchFromGitHub, pkgconfig, ncurses, python3, openssl, libgpgerror, gpgme, xorg, AppKit, Security }: with rustPlatform; buildRustPackage rec { - version = "unstable-2019-08-27"; + version = "0.3.0"; pname = "ripasso-cursive"; src = fetchFromGitHub { owner = "cortex"; repo = "ripasso"; - rev = "1b5ef4ae19f95f1422ba5cb09e9e689880599c40"; - sha256 = "1lh1in8knpqz4vbsmdyd4hh8y4bfhxjciysfbq3qzdpdpihgj0nn"; + rev = "release-${version}"; + sha256 = "1rkb23i9gcfmifcl31s8w86k7aza6nxrh3w33fvhv1ins1gxxk7w"; }; - cargoSha256 = "0dwaa106vj7jbgshhqpjabsr0zmkg1a5syzky7jcaasvc7r7njwl"; - cargoBuildFlags = [ "-p ripasso-cursive" ]; + cargoSha256 = "1p0bsl4h2w257vfjbpqiga693gaslfq34g30dghpqb5n4kl416zp"; + + cargoBuildFlags = [ "-p ripasso-cursive -p ripasso-man" ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ ncurses python3 openssl libgpgerror gpgme xorg.libxcb - ]; + ] ++ stdenv.lib.optionals stdenv.isDarwin [ AppKit Security ]; + + preFixup = '' + mkdir -p "$out/man/man1" + $out/bin/ripasso-man > $out/man/man1/ripasso-cursive.1 + rm $out/bin/ripasso-man + ''; meta = with stdenv.lib; { description = "A simple password manager written in Rust"; homepage = "https://github.com/cortex/ripasso"; license = licenses.gpl3; maintainers = with maintainers; [ sgo ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/tools/security/tpm2-tools/default.nix b/pkgs/tools/security/tpm2-tools/default.nix index 03347f5f787..b7c2141b0f7 100644 --- a/pkgs/tools/security/tpm2-tools/default.nix +++ b/pkgs/tools/security/tpm2-tools/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "tpm2-tools"; - version = "4.0.1"; + version = "4.1"; src = fetchurl { url = "https://github.com/tpm2-software/${pname}/releases/download/${version}/${pname}-${version}.tar.gz"; - sha256 = "zOw/ymNwNBoQLFwu8d205c0kK/G7xsUdlp93/HjKZ9E="; + sha256 = "1wnw4i2m6dkafqjjma8mxw9419py2v1knhn3zf1gaizdabskgkh7"; }; nativeBuildInputs = [ pandoc pkgconfig makeWrapper ]; diff --git a/pkgs/tools/security/vault/default.nix b/pkgs/tools/security/vault/default.nix index 1e5a16e1958..11b0b067ccb 100644 --- a/pkgs/tools/security/vault/default.nix +++ b/pkgs/tools/security/vault/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "vault"; - version = "1.3.0"; + version = "1.3.1"; src = fetchFromGitHub { owner = "hashicorp"; repo = "vault"; rev = "v${version}"; - sha256 = "0ayvmqg4fj9cliwbl4pb12mailq7062j3f9v8arpv6x5r4hydlpy"; + sha256 = "052aj79gwmydc7ph1g567cbssqf8dsmqxad47k5hc5sc58bx7c93"; }; goPackagePath = "github.com/hashicorp/vault"; diff --git a/pkgs/tools/security/vulnix/default.nix b/pkgs/tools/security/vulnix/default.nix index 809787508f6..59d8b8c0875 100644 --- a/pkgs/tools/security/vulnix/default.nix +++ b/pkgs/tools/security/vulnix/default.nix @@ -2,11 +2,11 @@ python3Packages.buildPythonApplication rec { pname = "vulnix"; - version = "1.9.2"; + version = "1.9.4"; src = python3Packages.fetchPypi { inherit pname version; - sha256 = "06mi4a80g6nzvqxj51c7lc0q0dpdr603ly2r77ksf5m3k4glb6dm"; + sha256 = "06dpdsnz1ih0syas3x25s557qpw0f4kmypvxwaffm734djg8klmi"; }; outputs = [ "out" "doc" "man" ]; diff --git a/pkgs/tools/security/wpscan/Gemfile.lock b/pkgs/tools/security/wpscan/Gemfile.lock index bf03aba1418..7a29a18b7c3 100644 --- a/pkgs/tools/security/wpscan/Gemfile.lock +++ b/pkgs/tools/security/wpscan/Gemfile.lock @@ -1,45 +1,53 @@ GEM remote: https://rubygems.org/ specs: - activesupport (5.2.3) + activesupport (6.0.1) concurrent-ruby (~> 1.0, >= 1.0.2) i18n (>= 0.7, < 2) minitest (~> 5.1) tzinfo (~> 1.1) - addressable (2.6.0) - public_suffix (>= 2.0.2, < 4.0) - cms_scanner (0.5.1) - nokogiri (~> 1.10.0) - opt_parse_validator (~> 1.7.2) - public_suffix (~> 3.0.0) + zeitwerk (~> 2.2) + addressable (2.7.0) + public_suffix (>= 2.0.2, < 5.0) + cms_scanner (0.7.1) + get_process_mem (~> 0.2.5) + nokogiri (~> 1.10.4) + opt_parse_validator (~> 1.8.1) + public_suffix (>= 3.0, < 4.1) ruby-progressbar (~> 1.10.0) + sys-proctable (~> 1.2.2) typhoeus (~> 1.3.0) xmlrpc (~> 0.3) yajl-ruby (~> 1.4.1) concurrent-ruby (1.1.5) ethon (0.12.0) ffi (>= 1.3.0) - ffi (1.10.0) - i18n (1.6.0) + ffi (1.11.3) + get_process_mem (0.2.5) + ffi (~> 1.0) + i18n (1.7.0) concurrent-ruby (~> 1.0) mini_portile2 (2.4.0) - minitest (5.11.3) - nokogiri (1.10.3) + minitest (5.13.0) + nokogiri (1.10.7) mini_portile2 (~> 2.4.0) - opt_parse_validator (1.7.2) - activesupport (>= 4.2, < 5.3.0) - addressable (>= 2.5, < 2.7) - public_suffix (3.0.3) - ruby-progressbar (1.10.0) + opt_parse_validator (1.8.1) + activesupport (> 4.2, < 6.1.0) + addressable (>= 2.5, < 2.8) + public_suffix (4.0.1) + ruby-progressbar (1.10.1) + sys-proctable (1.2.2) + ffi thread_safe (0.3.6) typhoeus (1.3.1) ethon (>= 0.9.0) tzinfo (1.2.5) thread_safe (~> 0.1) - wpscan (3.5.3) - cms_scanner (~> 0.5.0) + wpscan (3.7.5) + cms_scanner (~> 0.7.1) xmlrpc (0.3.0) yajl-ruby (1.4.1) + zeitwerk (2.2.2) PLATFORMS ruby @@ -48,4 +56,4 @@ DEPENDENCIES wpscan BUNDLED WITH - 1.17.2 + 1.17.3 diff --git a/pkgs/tools/security/wpscan/default.nix b/pkgs/tools/security/wpscan/default.nix index 85455325f69..e7a784c1a77 100644 --- a/pkgs/tools/security/wpscan/default.nix +++ b/pkgs/tools/security/wpscan/default.nix @@ -13,7 +13,7 @@ bundlerApp { meta = with lib; { description = "Black box WordPress vulnerability scanner"; - homepage = https://wpscan.org/; + homepage = "https://wpscan.org/"; license = licenses.unfreeRedistributable; maintainers = with maintainers; [ nyanloutre manveru ]; platforms = platforms.unix; diff --git a/pkgs/tools/security/wpscan/gemset.nix b/pkgs/tools/security/wpscan/gemset.nix index c0ad80bd99b..5c0691fda1b 100644 --- a/pkgs/tools/security/wpscan/gemset.nix +++ b/pkgs/tools/security/wpscan/gemset.nix @@ -1,14 +1,14 @@ { activesupport = { - dependencies = ["concurrent-ruby" "i18n" "minitest" "tzinfo"]; + dependencies = ["concurrent-ruby" "i18n" "minitest" "tzinfo" "zeitwerk"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "110vp4frgkw3mpzlmshg2f2ig09cknls2w68ym1r1s39d01v0mi8"; + sha256 = "190xv21yz03zz8nlfly557ir859jr5zkwi89naziy65hskdnkw1s"; type = "gem"; }; - version = "5.2.3"; + version = "6.0.1"; }; addressable = { dependencies = ["public_suffix"]; @@ -16,21 +16,21 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0bcm2hchn897xjhqj9zzsxf3n9xhddymj4lsclz508f4vw3av46l"; + sha256 = "1fvchp2rhp2rmigx7qglf69xvjqvzq7x0g49naliw29r2bz656sy"; type = "gem"; }; - version = "2.6.0"; + version = "2.7.0"; }; cms_scanner = { - dependencies = ["nokogiri" "opt_parse_validator" "public_suffix" "ruby-progressbar" "typhoeus" "xmlrpc" "yajl-ruby"]; + dependencies = ["get_process_mem" "nokogiri" "opt_parse_validator" "public_suffix" "ruby-progressbar" "sys-proctable" "typhoeus" "xmlrpc" "yajl-ruby"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "03hvvqq0s35a6l7lx9zpagv0gcdzhw7jvhzssiaiy6y81cx4z9pn"; + sha256 = "14xmsigczibihlziisdgabsaz9lm2v31snlkc8kmza73pv8a61r4"; type = "gem"; }; - version = "0.5.1"; + version = "0.7.1"; }; concurrent-ruby = { groups = ["default"]; @@ -58,10 +58,21 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0j8pzj8raxbir5w5k6s7a042sb5k02pg0f8s4na1r5lan901j00p"; + sha256 = "10ay35dm0lkcqprsiya6q2kwvyid884102ryipr4vrk790yfp8kd"; type = "gem"; }; - version = "1.10.0"; + version = "1.11.3"; + }; + get_process_mem = { + dependencies = ["ffi"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1q7pivp9z9pdxc2ha32q7x9zgqy8m9jf87g6n5mvi5l6knxya8sh"; + type = "gem"; + }; + version = "0.2.5"; }; i18n = { dependencies = ["concurrent-ruby"]; @@ -69,10 +80,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1hfxnlyr618s25xpafw9mypa82qppjccbh292c4l3bj36az7f6wl"; + sha256 = "0hmypvx9iyc0b4hski7aic2xzm09cg1c7q1qlpnk3k8s5acxzyhl"; type = "gem"; }; - version = "1.6.0"; + version = "1.7.0"; }; mini_portile2 = { groups = ["default"]; @@ -89,10 +100,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0icglrhghgwdlnzzp4jf76b0mbc71s80njn5afyfjn4wqji8mqbq"; + sha256 = "0w16p7cvslh3hxd3cia8jg4pd85z7rz7xqb16vh42gj4rijn8rmi"; type = "gem"; }; - version = "5.11.3"; + version = "5.13.0"; }; nokogiri = { dependencies = ["mini_portile2"]; @@ -100,10 +111,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "02bjydih0j515szfv9mls195cvpyidh6ixm7dwbl3s2sbaxxk5s4"; + sha256 = "0r0qpgf80h764k176yr63gqbs2z0xbsp8vlvs2a79d5r9vs83kln"; type = "gem"; }; - version = "1.10.3"; + version = "1.10.7"; }; opt_parse_validator = { dependencies = ["activesupport" "addressable"]; @@ -111,30 +122,41 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "14zp0260x652pf75maq9ydvqsqgv8ji9w85gjk8f0vwjykf1151n"; + sha256 = "19rm44ww3zfb440kqpdprwb7y2d0gcm4znhv4kfs8dkhz8k1k5vy"; type = "gem"; }; - version = "1.7.2"; + version = "1.8.1"; }; public_suffix = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "08q64b5br692dd3v0a9wq9q5dvycc6kmiqmjbdxkxbfizggsvx6l"; + sha256 = "0xnfv2j2bqgdpg2yq9i2rxby0w2sc9h5iyjkpaas2xknwrgmhdb0"; type = "gem"; }; - version = "3.0.3"; + version = "4.0.1"; }; ruby-progressbar = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1cv2ym3rl09svw8940ny67bav7b2db4ms39i4raaqzkf59jmhglk"; + sha256 = "1k77i0d4wsn23ggdd2msrcwfy0i376cglfqypkk2q77r2l3408zf"; type = "gem"; }; - version = "1.10.0"; + version = "1.10.1"; + }; + sys-proctable = { + dependencies = ["ffi"]; + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0ndk34ipd4v96v5cbvj0kbkhnssi4nqrzd7sifyg3bavi1jrw3w8"; + type = "gem"; + }; + version = "1.2.2"; }; thread_safe = { groups = ["default"]; @@ -174,10 +196,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0j4v24iwy35q7qy3l8zr5r8mjn7nc7ahdiq13dpgjwrprvrw1jk2"; + sha256 = "0vn6i48msxhj8g769vn2s3siv98cnqchblw69ldk1mr85lw4jci6"; type = "gem"; }; - version = "3.5.3"; + version = "3.7.5"; }; xmlrpc = { groups = ["default"]; @@ -199,4 +221,14 @@ }; version = "1.4.1"; }; -} \ No newline at end of file + zeitwerk = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0jywi63w1m2b2w9fj9rjb9n3imf6p5bfijfmml1xzdnsrdrjz0x1"; + type = "gem"; + }; + version = "2.2.2"; + }; +} diff --git a/pkgs/tools/system/bootchart/default.nix b/pkgs/tools/system/bootchart/default.nix deleted file mode 100644 index d3f692b70e7..00000000000 --- a/pkgs/tools/system/bootchart/default.nix +++ /dev/null @@ -1,31 +0,0 @@ -{stdenv, fetchFromGitHub, pkgconfig, glib, gtk2, python2Packages }: - -stdenv.mkDerivation rec { - version = "0.14.8"; - pname = "bootchart"; - - src = fetchFromGitHub { - owner = "mmeeks"; - repo = "bootchart"; - rev = version; - sha256 = "12ja2hp6f49416zfjdx0kjfmlkh9wl9b7wz7gk372kps4gjnypqx"; - }; - - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ glib gtk2 python2Packages.python python2Packages.wrapPython python2Packages.pygtk ]; - pythonPath = with python2Packages; [ pygtk pycairo ]; - - installPhase = '' - make install DESTDIR=$out BINDIR=/bin PY_LIBDIR=/lib/${python2Packages.python.libPrefix} - wrapProgram $out/bin/pybootchartgui \ - --prefix PYTHONPATH : "$PYTHONPATH:$(toPythonPath $out)" - ''; - - meta = with stdenv.lib; { - homepage = http://www.bootchart.org/; - description = "Performance analysis and visualization of the GNU/Linux boot process"; - license = licenses.gpl2Plus; - platforms = platforms.linux; - }; - -} diff --git a/pkgs/tools/system/ipmiutil/default.nix b/pkgs/tools/system/ipmiutil/default.nix index 7966deeccc2..0d2a78efba1 100644 --- a/pkgs/tools/system/ipmiutil/default.nix +++ b/pkgs/tools/system/ipmiutil/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { baseName = "ipmiutil"; - version = "3.1.4"; + version = "3.1.5"; name = "${baseName}-${version}"; src = fetchurl { url = "mirror://sourceforge/project/${baseName}/${name}.tar.gz"; - sha256 = "0rca9bjn46i3xzah53l1r5bv1493773chj8x11by2asxyl9wlf4r"; + sha256 = "18q1nc2caaixy3dr2axdvwq37iz916piarvmg0jdfzaxfpaxpk2q"; }; buildInputs = [ openssl ]; diff --git a/pkgs/tools/system/minijail/default.nix b/pkgs/tools/system/minijail/default.nix index 74f0a84716a..2b4d1deb9f9 100644 --- a/pkgs/tools/system/minijail/default.nix +++ b/pkgs/tools/system/minijail/default.nix @@ -1,14 +1,13 @@ -{ stdenv, fetchgit, libcap }: +{ stdenv, fetchFromGitiles, libcap }: stdenv.mkDerivation rec { - shortname = "minijail"; - name = "${shortname}-${version}"; - version = "android-9.0.0_r3"; + pname = "minijail"; + version = "android-10.0.0_r9"; - src = fetchgit { + src = fetchFromGitiles { url = "https://android.googlesource.com/platform/external/minijail"; rev = version; - sha256 = "1g1g52s3q61amcnx8cv1332sbixpck1bmjzgsrjiw5ix7chrzkp2"; + sha256 = "0gcfsyim1krrddcklydqfxl8mamaxgail2xl5qp9yclq60km8f22"; }; buildInputs = [ libcap ]; @@ -20,13 +19,20 @@ stdenv.mkDerivation rec { sed -i '/#include <asm\/siginfo.h>/ d' signal_handler.c ''; + postPatch = '' + patchShebangs platform2_preinstall.sh + ''; + + postBuild = '' + ./platform2_preinstall.sh ${version} $out/include/chromeos + ''; + installPhase = '' - mkdir -p $out/lib + mkdir -p $out/lib/pkgconfig $out/include/chromeos $out/bin cp -v *.so $out/lib - mkdir -p $out/include - cp -v libminijail.h $out/include - mkdir -p $out/bin - cp minijail0 $out/bin + cp -v *.pc $out/lib/pkgconfig + cp -v libminijail.h scoped_minijail.h $out/include/chromeos + cp -v minijail0 $out/bin ''; meta = { diff --git a/pkgs/tools/system/thermald/default.nix b/pkgs/tools/system/thermald/default.nix index 8caff1170bc..7afa91abf13 100644 --- a/pkgs/tools/system/thermald/default.nix +++ b/pkgs/tools/system/thermald/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { pname = "thermald"; - version = "1.9"; + version = "1.9.1"; src = fetchFromGitHub { owner = "01org"; repo = "thermal_daemon"; rev = "v${version}"; - sha256 = "1ajhivl9jifcf12nbk281yayk7666v65m249aclyli0bz1kh8cfs"; + sha256 = "0iagc3jqpnh6q2fa1gx4wx6r8qg0556j60xr159zqg95djr4dv99"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/system/vboot_reference/default.nix b/pkgs/tools/system/vboot_reference/default.nix index 0bf8a7e85dc..bce6d0c4185 100644 --- a/pkgs/tools/system/vboot_reference/default.nix +++ b/pkgs/tools/system/vboot_reference/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchgit, pkgconfig, libuuid, openssl, libyaml, lzma }: +{ stdenv, fetchFromGitiles, pkgconfig, libuuid, openssl, libyaml, lzma }: stdenv.mkDerivation rec { version = "20180311"; @@ -6,8 +6,8 @@ stdenv.mkDerivation rec { pname = "vboot_reference"; - src = fetchgit { - url = https://chromium.googlesource.com/chromiumos/platform/vboot_reference; + src = fetchFromGitiles { + url = "https://chromium.googlesource.com/chromiumos/platform/vboot_reference"; rev = checkout; sha256 = "1zja4ma6flch08h5j2l1hqnxmw2xwylidnddxxd5y2x05dai9ddj"; }; diff --git a/pkgs/tools/text/diffstat/default.nix b/pkgs/tools/text/diffstat/default.nix index fa5718ce4d3..bf4ff279f8f 100644 --- a/pkgs/tools/text/diffstat/default.nix +++ b/pkgs/tools/text/diffstat/default.nix @@ -1,14 +1,14 @@ { fetchurl, stdenv }: stdenv.mkDerivation rec { - name = "diffstat-1.62"; + name = "diffstat-1.63"; src = fetchurl { urls = [ "ftp://ftp.invisible-island.net/diffstat/${name}.tgz" "https://invisible-mirror.net/archives/diffstat/${name}.tgz" ]; - sha256 = "07sr482y6iw7n7ddkba0w51kbjc99snvnijkn5ba2xzd8hv1h2bz"; + sha256 = "0vyw200s5dv1257pmrh6c6fdkmw3slyz5szpqfx916xr04sdbpby"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/text/gawk/gawk-with-extensions.nix b/pkgs/tools/text/gawk/gawk-with-extensions.nix new file mode 100644 index 00000000000..751e5181bb5 --- /dev/null +++ b/pkgs/tools/text/gawk/gawk-with-extensions.nix @@ -0,0 +1,12 @@ +{ runCommand, gawk, extensions, makeWrapper }: + +runCommand "gawk-with-extensions" { + buildInputs = [ makeWrapper gawk ] ++ extensions; +} '' + mkdir -p $out/bin + for i in ${gawk}/bin/*; do + name="$(basename "$i")" + makeWrapper $i $out/bin/$name \ + --prefix AWKLIBPATH : "${gawk}/lib/gawk:''${AWKLIBPATH:-}" + done +'' diff --git a/pkgs/tools/text/gawk/gawkextlib.nix b/pkgs/tools/text/gawk/gawkextlib.nix new file mode 100644 index 00000000000..e15b2d4e257 --- /dev/null +++ b/pkgs/tools/text/gawk/gawkextlib.nix @@ -0,0 +1,149 @@ +{ stdenv, recurseIntoAttrs, fetchgit, writeText, pkgconfig, autoreconfHook +, autoconf, automake, libiconv, libtool, texinfo, gettext, gawk, rapidjson, gd +, shapelib, libharu, lmdb, gmp, glibcLocales, mpfr, more, postgresql, hiredis +, expat, tre, makeWrapper }: + +let + buildExtension = stdenv.lib.makeOverridable + ({ name, gawkextlib, extraBuildInputs ? [ ], doCheck ? true }: + let is_extension = !isNull gawkextlib; + in stdenv.mkDerivation rec { + pname = "gawkextlib-${name}"; + version = "unstable-2019-11-21"; + + src = fetchgit { + url = "git://git.code.sf.net/p/gawkextlib/code"; + rev = "f70f10da2804e4fd0a0bac57736e9c1cf21e345d"; + sha256 = "0r8fz89n3l4dfszs1980yqj0ah95430lj0y1lb7blfkwxa6c2xik"; + }; + + postPatch = '' + cd ${name} + ''; + + nativeBuildInputs = [ + autoconf + automake + libtool + autoreconfHook + pkgconfig + texinfo + gettext + ]; + + buildInputs = [ gawk ] ++ extraBuildInputs; + propagatedBuildInputs = stdenv.lib.optional is_extension gawkextlib; + + setupHook = if is_extension then ./setup-hook.sh else null; + inherit gawk; + + inherit doCheck; + checkInputs = [ more ]; + + meta = with stdenv.lib; { + homepage = "https://sourceforge.net/projects/gawkextlib/"; + description = "Dynamically loaded extension libraries for GNU AWK"; + longDescription = '' + The gawkextlib project provides several extension libraries for + gawk (GNU AWK), as well as libgawkextlib containing some APIs that + are useful for building gawk extension libraries. These libraries + enable gawk to process XML data, interact with a PostgreSQL + database, use the GD graphics library, and perform unlimited + precision MPFR calculations. + ''; + license = licenses.gpl3Plus; + platforms = platforms.unix; + maintainers = with maintainers; [ tomberek ]; + }; + }); + gawkextlib = buildExtension { + gawkextlib = null; + name = "lib"; + }; + libs = { + abort = buildExtension { + inherit gawkextlib; + name = "abort"; + }; + aregex = buildExtension { + inherit gawkextlib; + name = "aregex"; + extraBuildInputs = [ tre ]; + }; + csv = buildExtension { + inherit gawkextlib; + name = "csv"; + }; + errno = buildExtension { + inherit gawkextlib; + name = "errno"; + }; + gd = buildExtension { + inherit gawkextlib; + name = "gd"; + extraBuildInputs = [ gd ]; + }; + haru = buildExtension { + inherit gawkextlib; + name = "haru"; + extraBuildInputs = [ libharu ]; + }; + json = buildExtension { + inherit gawkextlib; + name = "json"; + extraBuildInputs = [ rapidjson ]; + }; + lmdb = buildExtension { + inherit gawkextlib; + name = "lmdb"; + extraBuildInputs = [ lmdb ]; + # mdb_env_open(env, /dev/null) + #! No such device + # mdb_env_open(env, /dev/null) + #! Operation not supported by device + doCheck = !stdenv.isDarwin; + }; + mbs = buildExtension { + inherit gawkextlib; + name = "mbs"; + extraBuildInputs = [ glibcLocales ]; + #! "spät": length: 5, mbs_length: 6, wcswidth: 4 + doCheck = !stdenv.isDarwin; + }; + mpfr = buildExtension { + inherit gawkextlib; + name = "mpfr"; + extraBuildInputs = [ gmp mpfr ]; + }; + nl_langinfo = buildExtension { + inherit gawkextlib; + name = "nl_langinfo"; + }; + pgsql = buildExtension { + inherit gawkextlib; + name = "pgsql"; + extraBuildInputs = [ postgresql ]; + }; + redis = buildExtension { + inherit gawkextlib; + name = "redis"; + extraBuildInputs = [ hiredis ]; + }; + select = buildExtension { + inherit gawkextlib; + name = "select"; + }; + timex = buildExtension { + inherit gawkextlib; + name = "timex"; + }; + xml = buildExtension { + inherit gawkextlib; + name = "xml"; + extraBuildInputs = [ expat libiconv ]; + }; + }; +in recurseIntoAttrs (libs // { + inherit gawkextlib buildExtension; + full = builtins.attrValues libs; +}) diff --git a/pkgs/tools/text/gawk/setup-hook.sh b/pkgs/tools/text/gawk/setup-hook.sh new file mode 100644 index 00000000000..d568cb8c7dd --- /dev/null +++ b/pkgs/tools/text/gawk/setup-hook.sh @@ -0,0 +1,6 @@ +local oldOpts="-u" +shopt -qo nounset || oldOpts="+u" +set +u +. @gawk@/etc/profile.d/gawk.sh +gawklibpath_append @out@/lib/gawk +set "$oldOpts" diff --git a/pkgs/tools/text/groff/0001-Fix-cross-compilation-by-looking-for-ar.patch b/pkgs/tools/text/groff/0001-Fix-cross-compilation-by-looking-for-ar.patch new file mode 100644 index 00000000000..671293cda5b --- /dev/null +++ b/pkgs/tools/text/groff/0001-Fix-cross-compilation-by-looking-for-ar.patch @@ -0,0 +1,46 @@ +From 1454525f70b43a6957b7c9e1870e997368787da3 Mon Sep 17 00:00:00 2001 +From: Samuel Dionne-Riel <samuel@dionne-riel.com> +Date: Fri, 8 Nov 2019 21:59:21 -0500 +Subject: [PATCH] Fix cross-compilation by looking for `ar`. + +--- + Makefile.am | 2 +- + configure.ac | 2 ++ + 2 files changed, 3 insertions(+), 1 deletion(-) + +diff --git a/Makefile.am b/Makefile.am +index d18c49b8..b1b53338 100644 +--- a/Makefile.am ++++ b/Makefile.am +@@ -494,7 +494,7 @@ CCC=@CXX@ + # INSTALL_INFO + # LN_S + +-AR=ar ++AR=@AR@ + ETAGS=etags + ETAGSFLAGS= + # Flag that tells etags to assume C++. +diff --git a/configure.ac b/configure.ac +index 28e75f17..2449b9f5 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -37,6 +37,7 @@ AC_CONFIG_AUX_DIR([build-aux]) + + AC_CONFIG_HEADERS([src/include/config.h:src/include/config.hin]) + AC_CONFIG_SRCDIR([src/roff/groff/groff.cpp]) ++AC_CONFIG_MACRO_DIR([m4]) + + AC_USE_SYSTEM_EXTENSIONS + +@@ -72,6 +73,7 @@ GROFF_DOC_CHECK + GROFF_MAKEINFO + GROFF_TEXI2DVI + AC_PROG_RANLIB ++AC_CHECK_TOOL([AR], [ar], [ar]) + GROFF_INSTALL_SH + GROFF_INSTALL_INFO + AC_PROG_INSTALL +-- +2.23.0 + diff --git a/pkgs/tools/text/groff/default.nix b/pkgs/tools/text/groff/default.nix index 4055c5c083d..ec7e724d1fc 100644 --- a/pkgs/tools/text/groff/default.nix +++ b/pkgs/tools/text/groff/default.nix @@ -20,6 +20,10 @@ stdenv.mkDerivation rec { enableParallelBuilding = false; + patches = [ + ./0001-Fix-cross-compilation-by-looking-for-ar.patch + ]; + postPatch = stdenv.lib.optionalString (psutils != null) '' substituteInPlace src/preproc/html/pre-html.cpp \ --replace "psselect" "${psutils}/bin/psselect" diff --git a/pkgs/tools/text/mdcat/default.nix b/pkgs/tools/text/mdcat/default.nix index 9ebc9840b07..4139771b5cb 100644 --- a/pkgs/tools/text/mdcat/default.nix +++ b/pkgs/tools/text/mdcat/default.nix @@ -2,24 +2,26 @@ rustPlatform.buildRustPackage rec { pname = "mdcat"; - version = "0.13.0"; + version = "0.14.0"; src = fetchFromGitHub { owner = "lunaryorn"; repo = pname; rev = "mdcat-${version}"; - sha256 = "0xlcpyfmil7sszv4008v4ipqswz49as4nzac0kzmzsb86np191q0"; + sha256 = "1q8h6pc1i89j1zl4s234inl9v95vsdrry1fzlis89sl2mnbv8ywy"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ (stdenv.lib.optional stdenv.isDarwin Security) openssl ]; - cargoSha256 = "16q17gm59lpjqa18q289cjmjlf2jicag12jz529x5kh11x6bjl8v"; + cargoSha256 = "1hxsfls6fpllc9yg5ib3qz6pa62j1y1va8a6356j6812csk4ifnn"; checkInputs = [ ansi2html ]; checkPhase = '' - # Skip tests that use the network. - cargo test -- --skip terminal::iterm2 + # Skip tests that use the network and that include files. + cargo test -- --skip terminal::iterm2 --skip terminal::resources::tests::remote \ + --skip magic::tests::detect_mimetype_of_svg_image \ + --skip magic::tests::detect_mimetype_of_png_image ''; meta = with stdenv.lib; { diff --git a/pkgs/tools/text/ocrmypdf/default.nix b/pkgs/tools/text/ocrmypdf/default.nix index 820d98408fb..13353daa171 100644 --- a/pkgs/tools/text/ocrmypdf/default.nix +++ b/pkgs/tools/text/ocrmypdf/default.nix @@ -28,14 +28,14 @@ let in buildPythonApplication rec { pname = "ocrmypdf"; - version = "9.0.3"; + version = "9.2.0"; disabled = ! python3Packages.isPy3k; src = fetchFromGitHub { owner = "jbarlow83"; repo = "OCRmyPDF"; rev = "v${version}"; - sha256 = "1qnjdcbwkxxqfahylzl0wj1gk51yi9m8akd4d1rrq37vg2vwdkjy"; + sha256 = "1mvc6x5nn242z65pxv39ch71vaikgi89bb0sjbfy2jbw91vk41xa"; }; nativeBuildInputs = with python3Packages; [ @@ -53,7 +53,6 @@ in buildPythonApplication rec { pikepdf pillow reportlab - ruffus setuptools tqdm ]; @@ -71,8 +70,8 @@ in buildPythonApplication rec { postPatch = '' substituteInPlace src/ocrmypdf/leptonica.py \ - --replace "ffi.dlopen(find_library('lept'))" \ - 'ffi.dlopen("${stdenv.lib.makeLibraryPath [leptonica]}/liblept${stdenv.hostPlatform.extensions.sharedLibrary}")' + --replace "lept = ffi.dlopen(_libpath)" \ + 'lept = ffi.dlopen("${stdenv.lib.makeLibraryPath [leptonica]}/liblept${stdenv.hostPlatform.extensions.sharedLibrary}")' ''; # The tests take potentially 20+ minutes, depending on machine diff --git a/pkgs/tools/text/ripgrep-all/default.nix b/pkgs/tools/text/ripgrep-all/default.nix index 521b123d878..d41be25231c 100644 --- a/pkgs/tools/text/ripgrep-all/default.nix +++ b/pkgs/tools/text/ripgrep-all/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub, rustPlatform, makeWrapper, ffmpeg -, pandoc, poppler_utils, ripgrep, Security +, pandoc, poppler_utils, ripgrep, Security, imagemagick, tesseract }: rustPlatform.buildRustPackage rec { @@ -19,9 +19,33 @@ rustPlatform.buildRustPackage rec { postInstall = '' wrapProgram $out/bin/rga \ - --prefix PATH ":" "${lib.makeBinPath [ ffmpeg pandoc poppler_utils ripgrep ]}" + --prefix PATH ":" "${lib.makeBinPath [ ffmpeg pandoc poppler_utils ripgrep imagemagick tesseract ]}" ''; + # Use upstream's example data to run a couple of queries to ensure the dependencies + # for all of the adapters are available. + installCheckPhase = '' + set -e + export PATH="$PATH:$out/bin" + + test1=$(rga --rga-no-cache "hello" exampledir/ | wc -l) + test2=$(rga --rga-no-cache --rga-adapters=tesseract "crate" exampledir/screenshot.png | wc -l) + + if [ $test1 != 26 ] + then + echo "ERROR: test1 failed! Could not find the word 'hello' 26 times in the sample data." + exit 1 + fi + + if [ $test2 != 1 ] + then + echo "ERROR: test2 failed! Could not find the word 'crate' in the screenshot." + exit 1 + fi + ''; + + doInstallCheck = true; + meta = with stdenv.lib; { description = "Ripgrep, but also search in PDFs, E-Books, Office documents, zip, tar.gz, and more"; longDescription = '' diff --git a/pkgs/tools/text/snippetpixie/default.nix b/pkgs/tools/text/snippetpixie/default.nix new file mode 100644 index 00000000000..276fb639205 --- /dev/null +++ b/pkgs/tools/text/snippetpixie/default.nix @@ -0,0 +1,83 @@ +{ stdenv +, fetchFromGitHub +, meson +, ninja +, vala +, pkgconfig +, wrapGAppsHook +, appstream +, desktop-file-utils +, python3 +, libgee +, glib +, gtk3 +, sqlite +, at-spi2-atk +, at-spi2-core +, dbus +, ibus +, json-glib +, pantheon +}: + +stdenv.mkDerivation rec { + pname = "snippetpixie"; + version = "1.2.2"; + + src = fetchFromGitHub { + owner = "bytepixie"; + repo = pname; + rev = version; + sha256 = "096xj7n1ypr8ss8mbwd1hyypvmzw5lc0hjlj2d1x8hbjljldfd13"; + }; + + nativeBuildInputs = [ + meson + ninja + vala + pkgconfig + wrapGAppsHook + appstream + desktop-file-utils + python3 + ]; + + buildInputs = [ + libgee + glib + gtk3 + sqlite + at-spi2-atk + at-spi2-core + dbus + ibus + json-glib + pantheon.granite + pantheon.elementary-gtk-theme + pantheon.elementary-icon-theme + ]; + + doCheck = true; + + postPatch = '' + chmod +x meson/post_install.py + patchShebangs meson/post_install.py + ''; + + meta = with stdenv.lib; { + description = "Your little expandable text snippet helper"; + longDescription = '' + Your little expandable text snippet helper. + + Save your often used text snippets and then expand them whenever you type their abbreviation. + + For example:- "spr`" expands to "Snippet Pixie rules!" + ''; + homepage = https://www.snippetpixie.com; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ + ianmjones + ] ++ pantheon.maintainers; + platforms = platforms.linux; + }; +} diff --git a/pkgs/tools/typesetting/pygmentex/default.nix b/pkgs/tools/typesetting/pygmentex/default.nix deleted file mode 100644 index 662f7717b33..00000000000 --- a/pkgs/tools/typesetting/pygmentex/default.nix +++ /dev/null @@ -1,56 +0,0 @@ -{ stdenv, fetchFromBitbucket, python2Packages }: - -python2Packages.buildPythonApplication rec { - pname = "pygmentex"; - version = "0.8"; - tlType = "run"; - - src = fetchFromBitbucket { - owner = "romildo"; - repo = pname; - rev = version; - sha256 = "07dnv7hgppy15bda2kcbrlvfqzl6lhza80klc7133dwg8q92hm6m"; - }; - - pythonPath = with python2Packages; [ pygments chardet ]; - - dontBuild = true; - - doCheck = false; - - installPhase = '' - mkdir -p $out/bin - cp -a pygmentex.py $out/bin - - mkdir -p $out/scripts/pygmentex - ln -s $out/bin/pygmentex.py $out/scripts/pygmentex - - mkdir -p $out/tex/latex/pygmentex - cp -a pygmentex.sty $out/tex/latex/pygmentex - - mkdir -p $out/doc/latex/pygmentex - cp -a README demo.* blueshade.png Factorial.java $out/doc/latex/pygmentex - ''; - - meta = with stdenv.lib; { - homepage = https://www.ctan.org/pkg/pygmentex; - description = "Auxiliary tool for typesetting code listings in LaTeX documents using Pygments"; - longDescription = '' - PygmenTeX is a Python-based LaTeX package that can be used for - typesetting code listings in a LaTeX document using Pygments. - - Pygments is a generic syntax highlighter for general use in all kinds of - software such as forum systems, wikis or other applications that need to - prettify source code. - - This package installs just the script needed to process code listings - snippets extracted from the a LaTeX document by the pygmentex LaTeX - package. In order to use it effectivelly the texlive package pygmentex - also has to be installed. This can be done by adding pygmentex to - texlive.combine. - ''; - license = licenses.lppl13c; - platforms = platforms.unix; - maintainers = with maintainers; [ romildo ]; - }; -} diff --git a/pkgs/tools/typesetting/tectonic/default.nix b/pkgs/tools/typesetting/tectonic/default.nix index 98c80da5b2c..c78e60996bb 100644 --- a/pkgs/tools/typesetting/tectonic/default.nix +++ b/pkgs/tools/typesetting/tectonic/default.nix @@ -3,16 +3,16 @@ rustPlatform.buildRustPackage rec { pname = "tectonic"; - version = "0.1.11"; + version = "0.1.12"; src = fetchFromGitHub { owner = "tectonic-typesetting"; repo = "tectonic"; rev = "v${version}"; - sha256 = "1j98qxlq74vs8nf2jsn2xw9iyrf8kih4v0hrvznkhcab6bpibp2x"; + sha256 = "0dycv135bkpf71iwlwh8rwwvn287d605nl7v8mjxlrsayiivdmn9"; }; - cargoSha256 = "0hsm5a40lc3gy1zrfrchp7zby17xjv5a4llqr4xmka07y7sk08fn"; + cargoSha256 = "0bkgh73kqcdv3j9hr3m13wrdhls3zrk7aii9shzbzl6rnp2ry1az"; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/typesetting/tex/texlive/bin.nix b/pkgs/tools/typesetting/tex/texlive/bin.nix index 8fb155da755..9eaa81e144b 100644 --- a/pkgs/tools/typesetting/tex/texlive/bin.nix +++ b/pkgs/tools/typesetting/tex/texlive/bin.nix @@ -2,7 +2,7 @@ , texlive , zlib, libiconv, libpng, libX11 , freetype, gd, libXaw, icu, ghostscript, libXpm, libXmu, libXext -, perl, perlPackages, pkgconfig, autoreconfHook +, perl, perlPackages, python2Packages, pkgconfig, autoreconfHook , poppler, libpaper, graphite2, zziplib, harfbuzz, potrace, gmp, mpfr , cairo, pixman, xorg, clisp, biber, xxHash , makeWrapper, shortenPerlShebang @@ -261,9 +261,24 @@ dvisvgm = stdenv.mkDerivation { inherit (common) src; + patches = [ + # Fix for ghostscript>=9.27 + # Backport of + # https://github.com/mgieseki/dvisvgm/commit/bc51951bc90b700c28ea018993bdb058e5271e9b + ./dvisvgm-fix.patch + + # Needed for ghostscript>=9.50 + (fetchpatch { + url = "https://github.com/mgieseki/dvisvgm/commit/7b93a9197b69305429183affd24fa40ee04a663a.patch"; + sha256 = "1gmj76ja9xng39wxckhs9q140abixgb8rkrcfv2cdgq786wm3vag"; + stripLen = 1; + extraPrefix = "texk/dvisvgm/dvisvgm-src/"; + }) + ]; + nativeBuildInputs = [ pkgconfig ]; # TODO: dvisvgm still uses vendored dependencies - buildInputs = [ core/*kpathsea*/ ghostscript zlib freetype potrace xxHash ]; + buildInputs = [ core/*kpathsea*/ ghostscript zlib freetype /*potrace xxHash*/ ]; preConfigure = "cd texk/dvisvgm"; @@ -287,6 +302,15 @@ dvipng = stdenv.mkDerivation { nativeBuildInputs = [ perl pkgconfig ]; buildInputs = [ core/*kpathsea*/ zlib libpng freetype gd ghostscript makeWrapper ]; + patches = [ + (fetchpatch { + url = "http://git.savannah.nongnu.org/cgit/dvipng.git/patch/?id=f3ff241827a587e3d39eda477041fd3280f5b245"; + sha256 = "1a0ixl9mga24p6xk8dy3v60yifvbzd27vs0hv8996rfkp8jqa7is"; + stripLen = 1; + extraPrefix = "texk/dvipng/dvipng-src/"; + }) + ]; + preConfigure = '' cd texk/dvipng patchShebangs doc/texi2pod.pl @@ -335,6 +359,43 @@ latexindent = perlPackages.buildPerlPackage rec { }; +pygmentex = python2Packages.buildPythonApplication rec { + pname = "pygmentex"; + inherit (src) version; + + src = stdenv.lib.head (builtins.filter (p: p.tlType == "run") texlive.pygmentex.pkgs); + + propagatedBuildInputs = with python2Packages; [ pygments chardet ]; + + dontBuild = true; + + doCheck = false; + + installPhase = '' + runHook preInstall + + install -D ./scripts/pygmentex/pygmentex.py "$out"/bin/pygmentex + + runHook postInstall + ''; + + meta = with stdenv.lib; { + homepage = https://www.ctan.org/pkg/pygmentex; + description = "Auxiliary tool for typesetting code listings in LaTeX documents using Pygments"; + longDescription = '' + PygmenTeX is a Python-based LaTeX package that can be used for + typesetting code listings in a LaTeX document using Pygments. + + Pygments is a generic syntax highlighter for general use in all kinds of + software such as forum systems, wikis or other applications that need to + prettify source code. + ''; + license = licenses.lppl13c; + maintainers = with maintainers; [ romildo ]; + }; +}; + + inherit biber; bibtexu = bibtex8; bibtex8 = stdenv.mkDerivation { diff --git a/pkgs/tools/typesetting/tex/texlive/default.nix b/pkgs/tools/typesetting/tex/texlive/default.nix index 0c05b3be18d..44dc45fdfb2 100644 --- a/pkgs/tools/typesetting/tex/texlive/default.nix +++ b/pkgs/tools/typesetting/tex/texlive/default.nix @@ -100,11 +100,15 @@ let map (up: "${up}/${urlName}.tar.xz") urlPrefixes ); - # Upstream refuses to distribute stable tarballs, - # so we host snapshots on IPFS or on our own servers. - # Common packages should get served from the binary cache anyway. - # See discussions, e.g. https://github.com/NixOS/nixpkgs/issues/24683 + # The tarballs on CTAN mirrors for the current release are constantly + # receiving updates, so we can't use those directly. Stable snapshots + # need to be used instead. Ideally, for the release branches of NixOS we + # should be switching to the tlnet-final versions + # (https://tug.org/historic/). urlPrefixes = args.urlPrefixes or [ + # Snapshots hosted by one of the texlive release managers + https://texlive.info/tlnet-archive/2019/10/19/tlnet/archive + # Mirror hosted by @veprbl http://146.185.144.154/texlive-2019 diff --git a/pkgs/tools/typesetting/tex/texlive/dvisvgm-fix.patch b/pkgs/tools/typesetting/tex/texlive/dvisvgm-fix.patch new file mode 100644 index 00000000000..0e927e24fd0 --- /dev/null +++ b/pkgs/tools/typesetting/tex/texlive/dvisvgm-fix.patch @@ -0,0 +1,16 @@ +diff a/texk/dvisvgm/dvisvgm-src/src/psdefs.cpp b/texk/dvisvgm/dvisvgm-src/src/psdefs.cpp +--- a/texk/dvisvgm/dvisvgm-src/src/psdefs.cpp ++++ b/texk/dvisvgm/dvisvgm-src/src/psdefs.cpp +@@ -107,8 +107,7 @@ const char *PSInterpreter::PSDEFS = + "dmode sysexec<</Normal 0/Compatible 0/Multiply 1/Screen 2/Overlay 3/SoftLight " + "4/HardLight 5/ColorDodge 6/ColorBurn 7/Darken 8/Lighten 9/Difference 10/Exclus" + "ion 11/Hue 12/Saturation 13/Color 14/Luminosity 15/CompatibleOverprint 16>>exc" +-"h get 1(setblendmode)prcmd}def/@pdfpagecount{GS_PDF_ProcSet begin pdfdict begi" +-"n(r)file pdfopen begin pdfpagecount currentdict pdfclose end end end}def/@pdfp" +-"agebox{GS_PDF_ProcSet begin pdfdict begin(r)file pdfopen begin dup dup 1 lt ex" +-"ch pdfpagecount gt or{pop}{pdfgetpage/MediaBox pget pop aload pop}ifelse curre" +-"ntdict pdfclose end end end}def DELAYBIND{.bindnow}if "; ++"h get 1(setblendmode)prcmd}def/@pdfpagecount{(r)file runpdfbegin pdfpagecount " ++"runpdfend}def/@pdfpagebox{(r)file runpdfbegin dup dup 1 lt exch pdfpagecount g" ++"t or{pop}{pdfgetpage/MediaBox pget pop aload pop}ifelse runpdfend}def DELAYBIN" ++"D{.bindnow}if "; diff --git a/pkgs/tools/video/rav1e/default.nix b/pkgs/tools/video/rav1e/default.nix new file mode 100644 index 00000000000..1b0fa9f551b --- /dev/null +++ b/pkgs/tools/video/rav1e/default.nix @@ -0,0 +1,48 @@ +{ rustPlatform, fetchFromGitHub, fetchurl, stdenv, lib, unzip, nasm }: + +rustPlatform.buildRustPackage rec { + pname = "rav1e"; + version = "0.2.0"; + + src = stdenv.mkDerivation rec { + name = "${pname}-${version}-source"; + + src = fetchFromGitHub { + owner = "xiph"; + repo = "rav1e"; + rev = "v${version}"; + sha256 = "0sij9hwnar27gcwvfcjbhgyrhw99zjv8gr9s9gshqi766p5dy51a"; + }; + cargoLock = fetchurl { + url = "https://github.com/xiph/rav1e/releases/download/v${version}/rav1e-${version}.zip"; + sha256 = "1i48c7mvc9q20d76p2rpxva551249m3p52q2z1g9sj4xzpyyk41m"; + }; + + nativeBuildInputs = [ unzip ]; + + installPhase = '' + mkdir -p $out + cp -R ./* $out/ + unzip ${cargoLock} + cp ./Cargo.lock $out/Cargo.lock + ''; + }; + + cargoSha256 = "1z0xrcq4mx6gpjyqh1csa424sxmx54z3x7ij3w2063h6s2fv9jy3"; + + nativeBuildInputs = [ nasm ]; + + meta = with lib; { + description = "The fastest and safest AV1 encoder"; + longDescription = '' + rav1e is an AV1 video encoder. It is designed to eventually cover all use + cases, though in its current form it is most suitable for cases where + libaom (the reference encoder) is too slow. + Features: https://github.com/xiph/rav1e#features + ''; + inherit (src.src.meta) homepage; + license = licenses.bsd2; + maintainers = [ maintainers.primeos ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/tools/virtualization/amazon-ecs-cli/default.nix b/pkgs/tools/virtualization/amazon-ecs-cli/default.nix index 7745a3e7cb5..a27e006053f 100644 --- a/pkgs/tools/virtualization/amazon-ecs-cli/default.nix +++ b/pkgs/tools/virtualization/amazon-ecs-cli/default.nix @@ -4,10 +4,18 @@ stdenv.mkDerivation rec { pname = "amazon-ecs-cli"; version = "1.18.0"; - src = fetchurl { - url = "https://s3.amazonaws.com/amazon-ecs-cli/ecs-cli-linux-amd64-v${version}"; - sha256 = "1w4n7rkcxpdzg7450s22a80a27g845n61k2bdfhq4c1md7604nyz"; - }; + src = + if stdenv.hostPlatform.system == "x86_64-linux" then + fetchurl { + url = "https://s3.amazonaws.com/amazon-ecs-cli/ecs-cli-linux-amd64-v${version}"; + sha256 = "1w4n7rkcxpdzg7450s22a80a27g845n61k2bdfhq4c1md7604nyz"; + } + else if stdenv.hostPlatform.system == "x86_64-darwin" then + fetchurl { + url = "https://s3.amazonaws.com/amazon-ecs-cli/ecs-cli-darwin-amd64-v${version}"; + sha256 = "011rw4rv2vz6xa4vqfjsf9j6m3rffclv9xh0dgf5ckd07m3fd3sm"; + } + else throw "Architecture not supported"; dontUnpack = true; @@ -24,7 +32,6 @@ stdenv.mkDerivation rec { longDescription = "The Amazon Elastic Container Service (Amazon ECS) command line interface (CLI) provides high-level commands to simplify creating, updating, and monitoring clusters and tasks from a local development environment."; license = licenses.asl20; maintainers = with maintainers; [ Scriptkiddi ]; - platforms = [ "x86_64-linux" ]; + platforms = [ "x86_64-linux" "x86_64-darwin" ]; }; } - diff --git a/pkgs/tools/virtualization/cri-tools/default.nix b/pkgs/tools/virtualization/cri-tools/default.nix index f8df49240a5..910f2822c6f 100644 --- a/pkgs/tools/virtualization/cri-tools/default.nix +++ b/pkgs/tools/virtualization/cri-tools/default.nix @@ -2,12 +2,12 @@ buildGoPackage rec { pname = "cri-tools"; - version = "1.16.1"; + version = "1.17.0"; src = fetchFromGitHub { owner = "kubernetes-sigs"; repo = pname; rev = "v${version}"; - sha256 = "1kpbs9dxwhlmqdqrmsqhp03qs4s7dl8b86lkmg066sicdaw433fn"; + sha256 = "0h9gry56graif761lmcy91q9fzwvmwb15wcx8245927yfg5j0zgh"; }; goPackagePath = "github.com/kubernetes-sigs/cri-tools"; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index cc92b56da57..4f522103003 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -40,6 +40,7 @@ mapAliases ({ adobe_flex_sdk = apache-flex-sdk; # added 2018-06-01 ag = silver-searcher; # added 2018-04-25 aircrackng = aircrack-ng; # added 2016-01-14 + alienfx = throw "alienfx has been removed."; # added 2019-12-08 ammonite-repl = ammonite; # added 2017-05-02 arduino_core = arduino-core; # added 2015-02-04 asciidocFull = asciidoc-full; # added 2014-06-22 @@ -47,9 +48,12 @@ mapAliases ({ at_spi2_core = at-spi2-core; # added 2018-02-25 bar-xft = lemonbar-xft; # added 2015-01-16 bashCompletion = bash-completion; # Added 2016-09-28 + batti = throw "batti has been removed from nixpkgs, as it was unmaintained"; # added 2019-12-10 beegfs = throw "beegfs has been removed."; # added 2019-11-24 + bluezFull = bluez; # Added 2019-12-03 bridge_utils = bridge-utils; # added 2015-02-20 bro = zeek; # added 2019-09-29 + bootchart = throw "bootchart has been removed from nixpkgs, as it is without a maintainer"; # added 2019-12-10 btrfsProgs = btrfs-progs; # added 2016-01-03 bittorrentSync = throw "bittorrentSync has been deprecated by resilio-sync."; # added 2019-06-03 bittorrentSync14 = throw "bittorrentSync14 has been deprecated by resilio-sync."; # added 2019-06-03 @@ -59,6 +63,7 @@ mapAliases ({ cantarell_fonts = cantarell-fonts; # added 2018-03-03 checkbashism = checkbashisms; # added 2016-08-16 cide = throw "deprecated in 2019-09-11: abandoned by upstream"; + cinepaint = throw "cinepaint has been removed from nixpkgs, as it was unmaintained"; # added 2019-12-10 cifs_utils = cifs-utils; # added 2016-08 ckb = ckb-next; # added 2018-10-21 clangAnalyzer = clang-analyzer; # added 2015-02-20 @@ -68,6 +73,7 @@ mapAliases ({ compton-git = compton; # added 2019-05-20 conntrack_tools = conntrack-tools; # added 2018-05 cool-old-term = cool-retro-term; # added 2015-01-31 + coprthr = throw "coprthr has been removed."; # added 2019-12-08 corebird = throw "deprecated 2019-10-02: See https://www.patreon.com/posts/corebirds-future-18921328. Please use Cawbird as replacement."; coredumper = throw "coredumper has been removed: Abandoned by upstream."; # added 2019-11-16 cpp-gsl = microsoft_gsl; # added 2019-05-24 @@ -79,6 +85,7 @@ mapAliases ({ dbus_daemon = dbus.daemon; # added 2018-04-25 dbus_glib = dbus-glib; # added 2018-02-25 dbus_libs = dbus; # added 2018-04-25 + diffuse = throw "diffuse has been removed from nixpkgs, as it's unmaintained"; # added 2019-12-10 dbus_tools = dbus.out; # added 2018-04-25 deadbeef-mpris2-plugin = deadbeefPlugins.mpris2; # added 2018-02-23 deadpixi-sam = deadpixi-sam-unstable; @@ -106,6 +113,7 @@ mapAliases ({ firefox-esr-wrapper = firefox-esr; # 2016-01 firefox-wrapper = firefox; # 2016-01 firefoxWrapper = firefox; # 2015-09 + firestr = throw "firestr has been removed."; # added 2019-12-08 flameGraph = flamegraph; # added 2018-04-25 font-awesome-ttf = font-awesome; # 2018-02-25 # 2019-10-31 @@ -126,6 +134,7 @@ mapAliases ({ git-hub = gitAndTools.git-hub; # added 2016-04-29 glib_networking = glib-networking; # added 2018-02-25 gnome-mpv = celluloid; # added 2019-08-22 + gnome15 = throw "gnome15 has been removed from nixpkgs, as it's unmaintained and depends on deprecated libraries."; # added 2019-12-10 gmic_krita_qt = gmic-qt-krita; # added 2019-09-07 gnome-themes-standard = gnome-themes-extra; # added 2018-03-14 gnome_doc_utils = gnome-doc-utils; # added 2018-02-25 @@ -160,8 +169,10 @@ mapAliases ({ gupnp_igd = gupnp-igd; # added 2018-02-25 gupnptools = gupnp-tools; # added 2015-12-19 gutenberg = zola; # added 2018-11-17 + hamster-time-traker = throw "hamster-time-tracker has been removed from nixpkgs, as it was unmaintained."; # added 2019-12-10 heimdalFull = heimdal; # added 2018-05-01 hepmc = hepmc2; # added 2019-08-05 + hexen = throw "hexen (SDL port) has been removed: Abandoned by upstream."; # added 2019-12-11 hicolor_icon_theme = hicolor-icon-theme; # added 2018-02-25 htmlTidy = html-tidy; # added 2014-12-06 iana_etc = iana-etc; # added 2017-03-08 @@ -181,6 +192,7 @@ mapAliases ({ keepassx2-http = keepassx-reboot; # added 2016-10-17 keybase-go = keybase; # added 2016-08-24 krename-qt5 = krename; # added 2017-02-18 + keymon = throw "keymon has been removed from nixpkgs, as it's abandoned and archived."; # 2019-12-10 kvm = qemu_kvm; # added 2018-04-25 letsencrypt = certbot; # added 2016-05-16 libaudit = audit; # added 2018-04-25 @@ -188,6 +200,9 @@ mapAliases ({ libcanberra_gtk3 = libcanberra-gtk3; # added 2018-02-25 libcap_manpages = libcap.doc; # added 2016-04-29 libcap_pam = if stdenv.isLinux then libcap.pam else null; # added 2016-04-29 + libindicate = throw "libindacate has been removed from nixpkgs, as it's abandoned and uses deprecated libraries"; # added 2019-12-10 + libindicate-gtk3 = throw "libindacate-gtk2 has been removed from nixpkgs, as it's abandoned and uses deprecated libraries"; # added 2019-12-10 + libindicate-gtk2 = throw "libindacate-gtk3 has been removed from nixpkgs, as it's abandoned and uses deprecated libraries"; # added 2019-12-10 libcap_progs = libcap.out; # added 2016-04-29 libdbusmenu_qt5 = libsForQt5.libdbusmenu; # added 2015-12-19 libdbusmenu-glib = libdbusmenu; # added 2018-05-01 @@ -207,6 +222,7 @@ mapAliases ({ libsysfs = sysfsutils; # added 2018-04-25 libtidy = html-tidy; # added 2014-12-21 libudev = udev; # added 2018-04-25 + libsexy = throw "libsexy has been removed from nixpkgs, as it's abandoned and no package needed it."; # 2019-12-10 links = links2; # added 2016-01-31 linux_rpi0 = linux_rpi1; linuxPackages_rpi0 = linuxPackages_rpi1; @@ -219,7 +235,10 @@ mapAliases ({ man_db = man-db; # added 2016-05 manpages = man-pages; # added 2015-12-06 mariadb-client = hiPrio mariadb.client; #added 2019.07.28 + mbedtls_1_3 = throw "mbedtls_1_3 is end of life, see https://tls.mbed.org/kb/how-to/upgrade-2.0"; # added 2019-12-08 mess = mame; # added 2019-10-30 + mcomix = throw "mcomix has been removed from nixpkgs, as it's unmaintained"; # added 2019-12-10 + mirage = throw "mirage has been femoved from nixpkgs, as it's unmaintained"; # added 2019-12-10 mysql-client = hiPrio mariadb.client; memtest86 = memtest86plus; # added 2019-05-08 mesa_noglu = mesa; # added 2019-05-28 @@ -259,6 +278,7 @@ mapAliases ({ nxproxy = nx-libs; # added 2019-02-15 nylas-mail-bin = throw "deprecated in 2019-09-11: abandoned by upstream"; opencascade_oce = opencascade; # added 2018-04-25 + oblogout = throw "oblogout has been removed from nixpkgs, as it's archived upstream."; # added 2019-12-10 opencl-icd = ocl-icd; # added 2017-01-20 openexr_ctl = ctl; # added 2018-04-25 openjpeg_2_1 = openjpeg_2; # added 2018-10-25 @@ -285,6 +305,7 @@ mapAliases ({ pltScheme = racket; # just to be sure plexpy = tautulli; # plexpy got renamed to tautulli, added 2019-02-22 pmtools = acpica-tools; # added 2018-11-01 + polarssl = mbedtls; # added 2018-04-25 poppler_qt5 = libsForQt5.poppler; # added 2015-12-19 postgresql95 = postgresql_9_5; postgresql96 = postgresql_9_6; @@ -312,7 +333,9 @@ mapAliases ({ ppl-address-book = throw "deprecated in 2019-05-02: abandoned by upstream."; processing3 = processing; # added 2019-08-16 procps-ng = procps; # added 2018-06-08 + pygmentex = texlive.bin.pygmentex; # added 2019-12-15 pyo3-pack = maturin; + pmenu = throw "pmenu has been removed from nixpkgs, as its maintainer is no longer interested in the package."; # added 2019-12-10 pulseaudioLight = pulseaudio; # added 2018-04-25 phonon-backend-gstreamer = throw "Please use libsForQt5.phonon-backend-gstreamer, as Qt4 support in this package has been removed."; # added 2019-11-22 phonon-backend-vlc = throw "Please use libsForQt5.phonon-backend-vlc, as Qt4 support in this package has been removed."; # added 2019-11-22 @@ -327,6 +350,9 @@ mapAliases ({ rng_tools = rng-tools; # added 2018-10-24 robomongo = robo3t; #added 2017-09-28 rssglx = rss-glx; #added 2015-03-25 + recordmydesktop = throw "recordmydesktop has been removed from nixpkgs, as it's unmaintained and uses deprecated libraries"; # added 2019-12-10 + gtk-recordmydesktop = throw "gtk-recordmydesktop has been removed from nixpkgs, as it's unmaintained and uses deprecated libraries"; # added 2019-12-10 + qt-recordmydesktop = throw "qt-recordmydesktop has been removed from nixpkgs, as it's abandoned and uses deprecated libraries"; # added 2019-12-10 ruby_2_0_0 = throw "deprecated 2018-0213: use a newer version of ruby"; ruby_2_1_0 = throw "deprecated 2018-0213: use a newer version of ruby"; ruby_2_2_9 = throw "deprecated 2018-0213: use a newer version of ruby"; @@ -413,19 +439,24 @@ mapAliases ({ ultrastardx-beta = ultrastardx; # added 2017-08-12 usb_modeswitch = usb-modeswitch; # added 2016-05-10 usbguard-nox = usbguard; # added 2019-09-04 + uzbl = throw "uzbl has been removed from nixpkgs, as it's unmaintained and uses insecure libraries"; v4l_utils = v4l-utils; # added 2019-08-07 v8_3_16_14 = throw "removed 2019-11-01: no longer referenced by other packages"; valadoc = throw "deprecated 2019-10-10: valadoc was merged into vala 0.38"; vimbWrapper = vimb; # added 2015-01 - vimprobable2Wrapper = vimprobable2; # added 2015-01 + vimprobable2 = throw "vimprobable2 has been removed from nixpkgs. It relied on webkitgtk24x that has been removed."; # added 2019-12-05 + vimprobable2-unwrapped = vimprobable2; # added 2019-12-05 virtviewer = virt-viewer; # added 2015-12-24 virtmanager = virt-manager; # added 2019-10-29 virtmanager-qt = virt-manager-qt; # added 2019-10-29 vorbisTools = vorbis-tools; # added 2016-01-26 webkit = webkitgtk; # added 2019-03-05 + webkitgtk24x-gtk3 = throw "webkitgtk24x-gtk3 has been removed because it's insecure. Please use webkitgtk."; # added 2019-12-05 + webkitgtk24x-gtk2 = throw "webkitgtk24x-gtk2 has been removed because it's insecure. Please use webkitgtk."; # added 2019-12-05 weechat-matrix-bridge = weechatScripts.weechat-matrix-bridge; # added 2018-09-06 wineStaging = wine-staging; # added 2018-01-08 winusb = woeusb; # added 2017-12-22 + winswitch = throw "winswitch has been removed from nixpkgs."; # added 2019-12-10 wireguard = wireguard-tools; # added 2018-05-19 morituri = whipper; # added 2018-09-13 xfceUnstable = xfce4-14; # added 2019-09-17 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index b63c5806692..6b9a6c44e61 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -221,6 +221,8 @@ in dispad = callPackage ../tools/X11/dispad { }; + dupeguru = callPackage ../applications/misc/dupeguru { }; + dump1090 = callPackage ../applications/radio/dump1090 { }; ebook2cw = callPackage ../applications/radio/ebook2cw { }; @@ -358,6 +360,8 @@ in fetchFromGitLab = callPackage ../build-support/fetchgitlab {}; + fetchFromGitiles = callPackage ../build-support/fetchgitiles {}; + fetchFromRepoOrCz = callPackage ../build-support/fetchrepoorcz {}; fetchNuGet = callPackage ../build-support/fetchnuget { }; @@ -480,6 +484,8 @@ in _1password = callPackage ../applications/misc/1password { }; + _6tunnel = callPackage ../tools/networking/6tunnel { }; + _9pfs = callPackage ../tools/filesystems/9pfs { }; a2ps = callPackage ../tools/text/a2ps { }; @@ -1057,6 +1063,8 @@ in awstats = callPackage ../tools/system/awstats { }; + awsweeper = callPackage ../tools/admin/awsweeper { }; + axel = callPackage ../tools/networking/axel { libssl = openssl; }; @@ -1222,8 +1230,6 @@ in boot = callPackage ../development/tools/build-managers/boot { }; - bootchart = callPackage ../tools/system/bootchart { }; - bowtie2 = callPackage ../applications/science/biology/bowtie2 { }; boxfs = callPackage ../tools/filesystems/boxfs { }; @@ -1285,6 +1291,8 @@ in burpsuite = callPackage ../tools/networking/burpsuite {}; + bs-platform = (callPackage ../development/compilers/bs-platform {}).bs-platform-621; + c3d = callPackage ../applications/graphics/c3d { inherit (darwin.apple_sdk.frameworks) Cocoa; }; @@ -1454,8 +1462,6 @@ in contrast = callPackage ../applications/accessibility/contrast { }; - coprthr = callPackage ../development/libraries/coprthr { }; - cplex = callPackage ../applications/science/math/cplex (config.cplex or {}); cpulimit = callPackage ../tools/misc/cpulimit { }; @@ -1489,6 +1495,8 @@ in crip = callPackage ../applications/audio/crip { }; + crosvm = callPackage ../applications/virtualization/crosvm { }; + crunch = callPackage ../tools/security/crunch { }; crudini = callPackage ../tools/misc/crudini { }; @@ -1837,6 +1845,8 @@ in icdiff = callPackage ../tools/text/icdiff {}; + ifm = callPackage ../tools/graphics/ifm {}; + interlock = callPackage ../servers/interlock {}; jellyfin = callPackage ../servers/jellyfin { ffmpeg = ffmpeg_4; }; @@ -2011,6 +2021,8 @@ in snipes = callPackage ../games/snipes { }; + snippetpixie = callPackage ../tools/text/snippetpixie { }; + socklog = callPackage ../tools/system/socklog { }; staccato = callPackage ../tools/text/staccato { }; @@ -2033,6 +2045,8 @@ in rainloop-community rainloop-standard; + rav1e = callPackage ../tools/video/rav1e { }; + ring-daemon = callPackage ../applications/networking/instant-messengers/ring-daemon { }; riot-desktop = callPackage ../applications/networking/instant-messengers/riot/riot-desktop.nix { }; @@ -2041,7 +2055,9 @@ in conf = config.riot-web.conf or null; }; - ripasso-cursive = callPackage ../tools/security/ripasso/cursive.nix {}; + ripasso-cursive = callPackage ../tools/security/ripasso/cursive.nix { + inherit (darwin.apple_sdk.frameworks) AppKit Security; + }; roundcube = callPackage ../servers/roundcube { }; @@ -2334,6 +2350,7 @@ in citrix_receiver_13_8_0 = citrix_receiver; citrix_workspace_unwrapped = callPackage ../applications/networking/remote/citrix-workspace { }; + citrix_workspace_unwrapped_19_12_0 = citrix_workspace_unwrapped.override { version = "19.12.0"; }; citrix_workspace_unwrapped_19_10_0 = citrix_workspace_unwrapped.override { version = "19.10.0"; }; citrix_workspace_unwrapped_19_8_0 = citrix_workspace_unwrapped.override { version = "19.8.0"; }; citrix_workspace_unwrapped_19_6_0 = citrix_workspace_unwrapped.override { version = "19.6.0"; }; @@ -2342,6 +2359,9 @@ in citrix_workspace = callPackage ../applications/networking/remote/citrix-workspace/wrapper.nix { citrix_workspace = citrix_workspace_unwrapped; }; + citrix_workspace_19_12_0 = callPackage ../applications/networking/remote/citrix-workspace/wrapper.nix { + citrix_workspace = citrix_workspace_unwrapped_19_12_0; + }; citrix_workspace_19_10_0 = callPackage ../applications/networking/remote/citrix-workspace/wrapper.nix { citrix_workspace = citrix_workspace_unwrapped_19_10_0; }; @@ -2422,6 +2442,8 @@ in evdevremapkeys = callPackage ../tools/inputmethods/evdevremapkeys { }; + gebaar-libinput = callPackage ../tools/inputmethods/gebaar-libinput { }; + libpinyin = callPackage ../development/libraries/libpinyin { }; libskk = callPackage ../development/libraries/libskk { @@ -3049,6 +3071,8 @@ in inherit (pythonPackages) buildPythonApplication pygtk numpy; }; + etcher = callPackage ../tools/misc/etcher { }; + ethtool = callPackage ../tools/misc/ethtool { }; ettercap = callPackage ../applications/networking/sniffers/ettercap { @@ -3395,6 +3419,11 @@ in inherit (darwin) locale; }; + gawk-with-extensions = callPackage ../tools/text/gawk/gawk-with-extensions.nix { + extensions = gawkextlib.full; + }; + gawkextlib = callPackage ../tools/text/gawk/gawkextlib.nix {}; + gawkInteractive = appendToName "interactive" (gawk.override { interactive = true; }); @@ -3535,10 +3564,6 @@ in gnirehtet = callPackage ../tools/networking/gnirehtet { }; - gnome15 = callPackage ../applications/misc/gnome15 { - inherit (gnome2) gnome_python gnome_python_desktop; - }; - gnome-builder = callPackage ../applications/editors/gnome-builder { }; gnome-keysign = callPackage ../tools/security/gnome-keysign { }; @@ -4452,7 +4477,7 @@ in makebootfat = callPackage ../tools/misc/makebootfat { }; - matrix-synapse = callPackage ../servers/matrix-synapse { }; + matrix-synapse = callPackage ../servers/matrix-synapse { python3 = python38; }; matrix-appservice-slack = callPackage ../servers/matrix-synapse/matrix-appservice-slack {}; @@ -5634,6 +5659,8 @@ in ssh = openssh; }; + pfetch = callPackage ../tools/misc/pfetch { }; + pfstools = callPackage ../tools/graphics/pfstools { }; philter = callPackage ../tools/networking/philter { }; @@ -5721,6 +5748,8 @@ in podman = callPackage ../applications/virtualization/podman { }; + podman-compose = python3Packages.callPackage ../applications/virtualization/podman-compose {}; + pod2mdoc = callPackage ../tools/misc/pod2mdoc { }; poedit = callPackage ../tools/text/poedit { }; @@ -5827,14 +5856,10 @@ in pydf = callPackage ../applications/misc/pydf { }; - pygmentex = callPackage ../tools/typesetting/pygmentex { }; - pympress = callPackage ../applications/office/pympress { }; pythonIRClib = pythonPackages.pythonIRClib; - pythonSexy = pythonPackages.libsexy; - pyditz = callPackage ../applications/misc/pyditz { pythonPackages = python27Packages; }; @@ -5968,18 +5993,8 @@ in reaverwps-t6x = callPackage ../tools/networking/reaver-wps-t6x {}; - recordmydesktop = callPackage ../applications/video/recordmydesktop { }; - rx = callPackage ../applications/graphics/rx { }; - gtk-recordmydesktop = callPackage ../applications/video/recordmydesktop/gtk.nix { - jack2 = jack2Full; - }; - - qt-recordmydesktop = callPackage ../applications/video/recordmydesktop/qt.nix { - jack2 = jack2Full; - }; - qt-box-editor = libsForQt5.callPackage ../applications/misc/qt-box-editor { }; recutils = callPackage ../tools/misc/recutils { }; @@ -7680,6 +7695,8 @@ in chez-scmutils = callPackage ../development/chez-modules/chez-scmutils { }; + chez-matchable = callPackage ../development/chez-modules/chez-matchable { }; + clang = llvmPackages.clang; clang-manpages = llvmPackages.clang-manpages; @@ -7986,8 +8003,7 @@ in isl = isl_0_17; })); - # Version 8.x is marked broken on Darwin: https://gist.github.com/GrahamcOfBorg/bef0231b7129681950f03c4ac06781c8. - gfortran = if stdenv.isDarwin then gfortran7 else gfortran8; + gfortran = gfortran8; gfortran48 = wrapCC (gcc48.cc.override { name = "gfortran"; @@ -8099,6 +8115,10 @@ in gforth = callPackage ../development/compilers/gforth {}; + gleam = callPackage ../development/compilers/gleam { + inherit (darwin.apple_sdk.frameworks) Security; + }; + gtk-server = callPackage ../development/interpreters/gtk-server {}; # Haskell and GHC @@ -8569,6 +8589,8 @@ in ocamlPackages = recurseIntoAttrs ocaml-ng.ocamlPackages; + ocaml-crunch = ocamlPackages.crunch.bin; + ocamlformat = callPackage ../development/tools/ocaml/ocamlformat { }; orc = callPackage ../development/compilers/orc { }; @@ -8608,6 +8630,8 @@ in qbe = callPackage ../development/compilers/qbe { }; + rasm = callPackage ../development/compilers/rasm { }; + rgbds = callPackage ../development/compilers/rgbds { }; rtags = callPackage ../development/tools/rtags { @@ -8668,6 +8692,9 @@ in inherit (darwin.apple_sdk.frameworks) Security; }; cargo-bloat = callPackage ../development/tools/rust/cargo-bloat { }; + cargo-crev = callPackage ../development/tools/rust/cargo-crev { + inherit (darwin.apple_sdk.frameworks) Security; + }; cargo-expand = callPackage ../development/tools/rust/cargo-expand { }; cargo-fuzz = callPackage ../development/tools/rust/cargo-fuzz { }; cargo-geiger = callPackage ../development/tools/rust/cargo-geiger { @@ -9471,6 +9498,8 @@ in alloy5 alloy; + ameba = callPackage ../development/tools/ameba { }; + augeas = callPackage ../tools/system/augeas { }; inherit (callPackage ../tools/admin/ansible { }) @@ -9820,6 +9849,8 @@ in lattice-diamond = callPackage ../development/tools/lattice-diamond { }; + direvent = callPackage ../development/tools/misc/direvent { }; + distcc = callPackage ../development/tools/misc/distcc { libiberty_static = libiberty.override { staticBuild = true; }; }; @@ -9858,6 +9889,8 @@ in doit = callPackage ../development/tools/build-managers/doit { }; + dolt = callPackage ../servers/sql/dolt { }; + dot2tex = pythonPackages.dot2tex; doxygen = callPackage ../development/tools/documentation/doxygen { @@ -9924,6 +9957,8 @@ in frame = callPackage ../development/libraries/frame { }; + frp = callPackage ../tools/networking/frp { }; + fsatrace = callPackage ../development/tools/misc/fsatrace { }; fswatch = callPackage ../development/tools/misc/fswatch { @@ -10118,6 +10153,8 @@ in kube-prompt = callPackage ../development/tools/kube-prompt { }; + kubeprompt = callPackage ../development/tools/kubeprompt { }; + kubicorn = callPackage ../development/tools/kubicorn { }; kustomize = callPackage ../development/tools/kustomize { }; @@ -10167,6 +10204,8 @@ in maven = maven3; maven3 = callPackage ../development/tools/build-managers/apache-maven { }; + mavproxy = python3Packages.callPackage ../applications/science/robotics/mavproxy { }; + go-md2man = callPackage ../development/tools/misc/md2man {}; mage = callPackage ../development/tools/build-managers/mage { }; @@ -10316,8 +10355,6 @@ in puppet-lint = callPackage ../development/tools/puppet/puppet-lint { }; - pyflame = callPackage ../development/tools/profiling/pyflame { }; - pyrseas = callPackage ../development/tools/database/pyrseas { }; qtcreator = libsForQt5.callPackage ../development/tools/qtcreator { }; @@ -10864,7 +10901,10 @@ in caf = callPackage ../development/libraries/caf {}; - cgal = callPackage ../development/libraries/CGAL {}; + # CGAL 5 has API changes + cgal_4 = callPackage ../development/libraries/CGAL/4.nix {}; + cgal_5 = callPackage ../development/libraries/CGAL {}; + cgal = cgal_4; cgui = callPackage ../development/libraries/cgui {}; @@ -11601,7 +11641,9 @@ in cairomm = callPackage ../development/libraries/cairomm { }; - pango = callPackage ../development/libraries/pango { }; + pango = callPackage ../development/libraries/pango { + harfbuzz = harfbuzz.override { withCoreText = stdenv.isDarwin; }; + }; pangolin = callPackage ../development/libraries/pangolin { inherit (darwin.apple_sdk.frameworks) Carbon Cocoa; @@ -12428,10 +12470,6 @@ in libimobiledevice = callPackage ../development/libraries/libimobiledevice { }; - libindicate-gtk2 = libindicate.override { gtkVersion = "2"; }; - libindicate-gtk3 = libindicate.override { gtkVersion = "3"; }; - libindicate = callPackage ../development/libraries/libindicate { }; - libindicator-gtk2 = libindicator.override { gtkVersion = "2"; }; libindicator-gtk3 = libindicator.override { gtkVersion = "3"; }; libindicator = callPackage ../development/libraries/libindicator { }; @@ -12804,6 +12842,8 @@ in libsoup = callPackage ../development/libraries/libsoup { }; + libspectrum = callPackage ../development/libraries/libspectrum { }; + libspiro = callPackage ../development/libraries/libspiro {}; libssh = callPackage ../development/libraries/libssh { }; @@ -13095,8 +13135,6 @@ in matio = callPackage ../development/libraries/matio { }; mbedtls = callPackage ../development/libraries/mbedtls { }; - mbedtls_1_3 = callPackage ../development/libraries/mbedtls/1.3.nix { }; - polarssl = mbedtls; # TODO: add to aliases.nix mdds = callPackage ../development/libraries/mdds { }; @@ -13642,7 +13680,7 @@ in inherit (kdeFrameworks.override { libsForQt5 = self; }) attica baloo bluez-qt kactivities kactivities-stats - karchive kauth kbookmarks kcmutils kcodecs kcompletion kconfig + karchive kauth kbookmarks kcmutils kcalendarcore kcodecs kcompletion kconfig kconfigwidgets kcoreaddons kcrash kdbusaddons kdeclarative kdelibs4support kdesignerplugin kdnssd kemoticons kfilemetadata kglobalaccel kguiaddons khtml ki18n kiconthemes kidletime kimageformats kio kitemmodels kitemviews @@ -14467,19 +14505,6 @@ in stdenv = clangStdenv; # TODO: https://github.com/NixOS/nixpkgs/issues/36947 }; - webkitgtk24x-gtk3 = callPackage ../development/libraries/webkitgtk/2.4.nix { - harfbuzz = harfbuzzFull.override { - icu = icu58; - }; - gst-plugins-base = gst_all_1.gst-plugins-base; - inherit (darwin) libobjc; - }; - - webkitgtk24x-gtk2 = webkitgtk24x-gtk3.override { - withGtk2 = true; - enableIntrospection = false; - }; - websocketpp = callPackage ../development/libraries/websocket++ { }; webrtc-audio-processing = callPackage ../development/libraries/webrtc-audio-processing { }; @@ -14659,11 +14684,11 @@ in plugins = []; }; - gsignondPlugins = { + gsignondPlugins = recurseIntoAttrs { sasl = callPackage ../development/libraries/gsignond/plugins/sasl.nix { }; oauth = callPackage ../development/libraries/gsignond/plugins/oauth.nix { }; lastfm = callPackage ../development/libraries/gsignond/plugins/lastfm.nix { }; - mail = callPackages ../development/libraries/gsignond/plugins/mail.nix { }; + mail = callPackage ../development/libraries/gsignond/plugins/mail.nix { }; }; ### DEVELOPMENT / LIBRARIES / AGDA @@ -14894,8 +14919,6 @@ in kerberos = libkrb5; }; - rdf4store = callPackage ../servers/http/4store { }; - apacheHttpd_2_4 = callPackage ../servers/http/apache-httpd/2.4.nix { }; apacheHttpd = pkgs.apacheHttpd_2_4; @@ -15766,12 +15789,11 @@ in server = server-pgsql; }; - zabbix44 = zabbixFor "v44"; - zabbix42 = zabbixFor "v42"; - zabbix40 = zabbixFor "v40"; - zabbix30 = zabbixFor "v30"; + zabbix44 = recurseIntoAttrs (zabbixFor "v44"); + zabbix40 = dontRecurseIntoAttrs (zabbixFor "v40"); + zabbix30 = dontRecurseIntoAttrs (zabbixFor "v30"); - zabbix = zabbix42; + zabbix = zabbix44; zipkin = callPackage ../servers/monitoring/zipkin { }; @@ -15793,7 +15815,7 @@ in alfred = callPackage ../os-specific/linux/batman-adv/alfred.nix { }; - alienfx = callPackage ../os-specific/linux/alienfx { }; + alertmanager-bot = callPackage ../servers/monitoring/alertmanager-bot { }; alsa-firmware = callPackage ../os-specific/linux/alsa-firmware { }; @@ -15854,12 +15876,6 @@ in bluez = bluez5; - bluezFull = bluez.override { - enableWiimote = true; - enableMidi = true; - enableSixaxis = true; - }; - inherit (python3Packages) bedup; bolt = callPackage ../os-specific/linux/bolt { }; @@ -16137,6 +16153,7 @@ in linux_mptcp_94 = callPackage ../os-specific/linux/kernel/linux-mptcp-94.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.cpu-cgroup-v2."4.11" kernelPatches.modinst_arg_list_too_long ] @@ -16154,6 +16171,7 @@ in linux_rpi1 = callPackage ../os-specific/linux/kernel/linux-rpi.nix { kernelPatches = with kernelPatches; [ bridge_stp_helper + request_key_helper ]; rpiVersion = 1; }; @@ -16161,6 +16179,7 @@ in linux_rpi2 = callPackage ../os-specific/linux/kernel/linux-rpi.nix { kernelPatches = with kernelPatches; [ bridge_stp_helper + request_key_helper ]; rpiVersion = 2; }; @@ -16168,6 +16187,7 @@ in linux_rpi3 = callPackage ../os-specific/linux/kernel/linux-rpi.nix { kernelPatches = with kernelPatches; [ bridge_stp_helper + request_key_helper ]; rpiVersion = 3; }; @@ -16175,6 +16195,7 @@ in linux_rpi4 = callPackage ../os-specific/linux/kernel/linux-rpi.nix { kernelPatches = with kernelPatches; [ bridge_stp_helper + request_key_helper ]; rpiVersion = 4; }; @@ -16182,6 +16203,7 @@ in linux_4_4 = callPackage ../os-specific/linux/kernel/linux-4.4.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.cpu-cgroup-v2."4.4" kernelPatches.modinst_arg_list_too_long # https://github.com/NixOS/nixpkgs/issues/42755 @@ -16195,6 +16217,7 @@ in linux_4_9 = callPackage ../os-specific/linux/kernel/linux-4.9.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.cpu-cgroup-v2."4.9" kernelPatches.modinst_arg_list_too_long ]; @@ -16203,6 +16226,7 @@ in linux_4_14 = callPackage ../os-specific/linux/kernel/linux-4.14.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper # See pkgs/os-specific/linux/kernel/cpu-cgroup-v2-patches/README.md # when adding a new linux version kernelPatches.cpu-cgroup-v2."4.11" @@ -16214,6 +16238,7 @@ in linux_4_19 = callPackage ../os-specific/linux/kernel/linux-4.19.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.modinst_arg_list_too_long kernelPatches.export_kernel_fpu_functions."4.14" ]; @@ -16222,6 +16247,7 @@ in linux_5_3 = callPackage ../os-specific/linux/kernel/linux-5.3.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.export_kernel_fpu_functions."5.3" ]; }; @@ -16229,18 +16255,21 @@ in linux_5_4 = callPackage ../os-specific/linux/kernel/linux-5.4.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper ]; }; linux_testing = callPackage ../os-specific/linux/kernel/linux-testing.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper ]; }; linux_testing_bcachefs = callPackage ../os-specific/linux/kernel/linux-testing-bcachefs.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.modinst_arg_list_too_long ]; }; @@ -16248,6 +16277,7 @@ in linux_hardkernel_4_14 = callPackage ../os-specific/linux/kernel/linux-hardkernel-4.14.nix { kernelPatches = [ kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper kernelPatches.modinst_arg_list_too_long ]; }; @@ -16559,8 +16589,6 @@ in libsass = callPackage ../development/libraries/libsass { }; - libsexy = callPackage ../development/libraries/libsexy { }; - libsepol = callPackage ../os-specific/linux/libsepol { }; libsmbios = callPackage ../os-specific/linux/libsmbios { }; @@ -16965,6 +16993,8 @@ in ubootRaspberryPi3_32bit ubootRaspberryPi3_64bit ubootRaspberryPiZero + ubootRock64 + ubootRockPro64 ubootSheevaplug ubootSopine ubootUtilite @@ -16974,10 +17004,6 @@ in # Non-upstream U-Boots: ubootNanonote = callPackage ../misc/uboot/nanonote.nix { }; - ubootRock64 = callPackage ../misc/uboot/rock64.nix { }; - - ubootRockPro64 = callPackage ../misc/uboot/rockpro64.nix { }; - uclibc = callPackage ../os-specific/linux/uclibc { }; uclibcCross = callPackage ../os-specific/linux/uclibc { @@ -17042,6 +17068,8 @@ in xf86_video_nested = callPackage ../os-specific/linux/xf86-video-nested { }; + xilinx-bootgen = callPackage ../tools/misc/xilinx-bootgen { }; + xorg_sys_opengl = callPackage ../os-specific/linux/opengl/xorg-sys { }; zd1211fw = callPackage ../os-specific/linux/firmware/zd1211 { }; @@ -17133,6 +17161,8 @@ in cherry = callPackage ../data/fonts/cherry { inherit (xorg) fonttosfnt mkfontdir; }; + cldr-emoji-annotation = callPackage ../data/misc/cldr-emoji-annotation { }; + clearlooks-phenix = callPackage ../data/themes/clearlooks-phenix { }; cnstrokeorder = callPackage ../data/fonts/cnstrokeorder {}; @@ -17292,6 +17322,8 @@ in greybird = callPackage ../data/themes/greybird { }; + gubbi-font = callPackage ../data/fonts/gubbi { }; + gyre-fonts = callPackage ../data/fonts/gyre {}; hack-font = callPackage ../data/fonts/hack { }; @@ -17587,6 +17619,8 @@ in shades-of-gray-theme = callPackage ../data/themes/shades-of-gray { }; + sweet = callPackage ../data/themes/sweet { }; + mime-types = callPackage ../data/misc/mime-types { }; shared-mime-info = callPackage ../data/misc/shared-mime-info { }; @@ -17744,12 +17778,20 @@ in uni-vga = callPackage ../data/fonts/uni-vga { }; + unicode-character-database = callPackage ../data/misc/unicode-character-database { }; + + unicode-emoji = callPackage ../data/misc/unicode-emoji { }; + + unihan-database = callPackage ../data/misc/unihan-database { }; + unifont = callPackage ../data/fonts/unifont { }; unifont_upper = callPackage ../data/fonts/unifont_upper { }; unscii = callPackage ../data/fonts/unscii { }; + uw-ttyp0 = callPackage ../data/fonts/uw-ttyp0 { inherit (xorg) fonttosfnt mkfontdir; }; + vanilla-dmz = callPackage ../data/icons/vanilla-dmz { }; vdrsymbols = callPackage ../data/fonts/vdrsymbols { }; @@ -17995,8 +18037,6 @@ in batik = callPackage ../applications/graphics/batik { }; - batti = callPackage ../applications/misc/batti { }; - baudline = callPackage ../applications/audio/baudline { }; @@ -18176,9 +18216,7 @@ in cgminer = callPackage ../applications/misc/cgminer { }; - chirp = callPackage ../applications/radio/chirp { - inherit (pythonPackages) pyserial pygtk; - }; + chirp = callPackage ../applications/radio/chirp { }; browsh = callPackage ../applications/networking/browsers/browsh { }; @@ -18264,12 +18302,6 @@ in python = python27; }; - cinepaint = callPackage ../applications/graphics/cinepaint { - fltk = fltk13; - libpng = libpng12; - cmake = cmake_2_8; - }; - codeblocks = callPackage ../applications/editors/codeblocks { }; codeblocksFull = codeblocks.override { contribPlugins = true; }; @@ -18364,8 +18396,6 @@ in inherit (pkgs.gnome2) libart_lgpl libgnomeui; }; - diffuse = callPackage ../applications/version-management/diffuse { }; - direwolf = callPackage ../applications/misc/direwolf { }; dirt = callPackage ../applications/audio/dirt {}; @@ -18614,7 +18644,7 @@ in eq10q = callPackage ../applications/audio/eq10q { }; errbot = callPackage ../applications/networking/errbot { - pythonPackages = python3Packages; + python = python3; }; espeak-classic = callPackage ../applications/audio/espeak { }; @@ -18950,10 +18980,6 @@ in desktopName = "Firefox DevEdition"; }; - firestr = libsForQt5.callPackage ../applications/networking/p2p/firestr - { boost = boost155; - }; - flac = callPackage ../applications/audio/flac { }; redoflacs = callPackage ../applications/audio/redoflacs { }; @@ -19198,6 +19224,8 @@ in gpsprune = callPackage ../applications/misc/gpsprune { }; + gpxlab = libsForQt5.callPackage ../applications/misc/gpxlab { }; + gpxsee = libsForQt5.callPackage ../applications/misc/gpxsee { }; gspell = callPackage ../development/libraries/gspell { }; @@ -19230,10 +19258,6 @@ in hakuneko = callPackage ../tools/misc/hakuneko { }; - hamster-time-tracker = callPackage ../applications/misc/hamster-time-tracker { - inherit (gnome2) gnome_python; - }; - hashit = callPackage ../tools/misc/hashit { }; hello = callPackage ../applications/misc/hello { }; @@ -19289,6 +19313,8 @@ in hydrogen = callPackage ../applications/audio/hydrogen { }; + hydroxide = callPackage ../applications/networking/hydroxide { }; + hyper = callPackage ../applications/misc/hyper { }; hyper-haskell-server-with-packages = callPackage ../development/tools/haskell/hyper-haskell/server.nix { @@ -19634,8 +19660,6 @@ in keyfinder-cli = libsForQt5.callPackage ../applications/audio/keyfinder-cli { }; - keymon = callPackage ../applications/video/key-mon { }; - kgraphviewer = libsForQt5.callPackage ../applications/graphics/kgraphviewer { }; khal = callPackage ../applications/misc/khal { }; @@ -19908,6 +19932,8 @@ in mako = callPackage ../applications/misc/mako { }; + mandelbulber = libsForQt5.callPackage ../applications/graphics/mandelbulber { }; + mapmap = libsForQt5.callPackage ../applications/video/mapmap { }; marathon = callPackage ../applications/networking/cluster/marathon { }; @@ -19950,8 +19976,6 @@ in meme = callPackage ../applications/graphics/meme { }; - mcomix = callPackage ../applications/graphics/mcomix { }; - mendeley = libsForQt5.callPackage ../applications/office/mendeley { gconf = pkgs.gnome2.GConf; }; @@ -20001,8 +20025,6 @@ in meh = callPackage ../applications/graphics/meh {}; - mirage = callPackage ../applications/graphics/mirage { }; - mixxx = libsForQt5.callPackage ../applications/audio/mixxx { inherit (vamp) vampSDK; }; @@ -20016,7 +20038,10 @@ in MMA = callPackage ../applications/audio/MMA { }; mmex = callPackage ../applications/office/mmex { - wxGTK30 = wxGTK30.override { withWebKit = true ; }; + wxGTK30 = wxGTK30.override { + withWebKit = true; + withGtk2 = false; + }; }; mmsd = callPackage ../tools/networking/mmsd { }; @@ -20173,7 +20198,7 @@ in avahi = avahi-compat; jackSupport = config.mumble.jackSupport or false; speechdSupport = config.mumble.speechdSupport or false; - pulseSupport = config.pulseaudio or false; + pulseSupport = config.pulseaudio or stdenv.isLinux; }).mumble; mumble_overlay = callPackage ../applications/networking/mumble/overlay.nix { @@ -20206,6 +20231,8 @@ in neocomp = callPackage ../applications/window-managers/neocomp { }; + netease-cloud-music = callPackage ../applications/audio/netease-cloud-music {}; + nicotine-plus = callPackage ../applications/networking/soulseek/nicotine-plus { geoip = geoipWithDatabase; }; @@ -20428,8 +20455,6 @@ in inherit (gnome2) libglade; }; - oblogout = callPackage ../tools/X11/oblogout { }; - obs-linuxbrowser = callPackage ../applications/video/obs-studio/linuxbrowser.nix { }; obs-studio = libsForQt5.callPackage ../applications/video/obs-studio { }; @@ -20676,8 +20701,6 @@ in plugin-torture = callPackage ../applications/audio/plugin-torture { }; - pmenu = callPackage ../applications/misc/pmenu { }; - polar-bookshelf = callPackage ../applications/misc/polar-bookshelf { }; poezio = python3Packages.poezio; @@ -20744,6 +20767,9 @@ in pythonmagick = callPackage ../applications/graphics/PythonMagick { }; qbittorrent = libsForQt5.callPackage ../applications/networking/p2p/qbittorrent { }; + qbittorrent-nox = qbittorrent.override { + guiSupport = false; + }; qcomicbook = libsForQt5.callPackage ../applications/graphics/qcomicbook { }; @@ -20889,6 +20915,8 @@ in railcar = callPackage ../applications/virtualization/railcar {}; + raiseorlaunch = callPackage ../applications/misc/raiseorlaunch {}; + rapcad = libsForQt5.callPackage ../applications/graphics/rapcad { boost = boost159; }; rapid-photo-downloader = libsForQt5.callPackage ../applications/graphics/rapid-photo-downloader { }; @@ -21370,12 +21398,16 @@ in tailor = callPackage ../applications/version-management/tailor {}; + taizen = callPackage ../applications/misc/taizen { }; + tangogps = callPackage ../applications/misc/tangogps { gconf = gnome2.GConf; }; tambura = callPackage ../applications/audio/tambura { }; + teams = callPackage ../applications/networking/instant-messengers/teams { }; + teamspeak_client = libsForQt512.callPackage ../applications/networking/instant-messengers/teamspeak/client.nix { }; teamspeak_server = callPackage ../applications/networking/instant-messengers/teamspeak/server.nix { }; @@ -21457,7 +21489,7 @@ in inherit (gnome2) libIDL; inherit (rustPackages_1_38_0) cargo rustc; libpng = libpng_apng; - enableGTK3 = true; + gtk3Support = true; }; thunderbolt = callPackage ../os-specific/linux/thunderbolt {}; @@ -21582,6 +21614,8 @@ in ulauncher = callPackage ../applications/misc/ulauncher { }; + twinkle = qt5.callPackage ../applications/networking/instant-messengers/twinkle { }; + umurmur = callPackage ../applications/networking/umurmur { }; udocker = pythonPackages.callPackage ../tools/virtualization/udocker { }; @@ -21604,10 +21638,6 @@ in uwimap = callPackage ../tools/networking/uwimap { }; - uzbl = callPackage ../applications/networking/browsers/uzbl { - webkitgtk = webkitgtk24x-gtk2; - }; - utox = callPackage ../applications/networking/instant-messengers/utox { }; valentina = libsForQt5.callPackage ../applications/misc/valentina { }; @@ -21619,7 +21649,7 @@ in vcv-rack = callPackage ../applications/audio/vcv-rack { }; vdirsyncer = callPackage ../tools/misc/vdirsyncer { - inherit (darwin.apple_sdk.frameworks) Security; + inherit (darwin.apple_sdk.frameworks) CoreServices Security; }; vdirsyncerStable = callPackage ../tools/misc/vdirsyncer/stable.nix { }; @@ -21873,8 +21903,6 @@ in wily = callPackage ../applications/editors/wily { }; - winswitch = callPackage ../tools/X11/winswitch { }; - wings = callPackage ../applications/graphics/wings { erlang = erlangR21; }; @@ -22622,7 +22650,8 @@ in digikam = libsForQt5.callPackage ../applications/graphics/digikam { inherit (plasma5) oxygen; - inherit (kdeApplications) akonadi-contacts kcalcore; + inherit (kdeApplications) akonadi-contacts; + inherit (kdeFrameworks) kcalendarcore; ffmpeg = ffmpeg_4; opencv3 = opencv3WithoutCuda; }; @@ -22779,6 +22808,8 @@ in gshogi = python3Packages.callPackage ../games/gshogi {}; + qtads = qt5.callPackage ../games/qtads { }; + gtetrinet = callPackage ../games/gtetrinet { inherit (gnome2) GConf libgnome libgnomeui; }; @@ -22795,8 +22826,6 @@ in inherit (haskellPackages) ghcWithPackages; }; - hexen = callPackage ../games/hexen { }; - holdingnuts = callPackage ../games/holdingnuts { }; hyperrogue = callPackage ../games/hyperrogue { }; @@ -22809,9 +22838,7 @@ in ideogram = callPackage ../applications/graphics/ideogram { }; - instead = callPackage ../games/instead { - lua = lua5; - }; + instead = callPackage ../games/instead { }; instead-launcher = callPackage ../games/instead-launcher { }; @@ -23352,6 +23379,8 @@ in ### DESKTOP ENVIRONMENTS + cinnamon = recurseIntoAttrs (callPackage ../desktops/cinnamon { }); + deepin = recurseIntoAttrs (import ../desktops/deepin { inherit pkgs libsForQt5; inherit (lib) makeScope; @@ -23389,6 +23418,7 @@ in timepp = callPackage ../desktops/gnome-3/extensions/timepp { }; topicons-plus = callPackage ../desktops/gnome-3/extensions/topicons-plus { }; window-corner-preview = callPackage ../desktops/gnome-3/extensions/window-corner-preview { }; + workspace-matrix = callPackage ../desktops/gnome-3/extensions/workspace-matrix { }; nohotcorner = throw "gnomeExtensions.nohotcorner removed since 2019-10-09: Since 3.34, it is a part of GNOME Shell configurable through GNOME Tweaks."; mediaplayer = throw "gnomeExtensions.mediaplayer deprecated since 2019-09-23: retired upstream https://github.com/JasonLG1979/gnome-shell-extensions-mediaplayer/blob/master/README.md"; @@ -23461,6 +23491,8 @@ in kwin-tiling = libsForQt5.callPackage ../desktops/plasma-5/kwin/scripts/tiling.nix { }; + krohnkite = libsForQt5.callPackage ../desktops/plasma-5/kwin/scripts/krohnkite.nix { }; + ### SCIENCE ### SCIENCE/CHEMISTY @@ -23571,6 +23603,8 @@ in kallisto = callPackage ../applications/science/biology/kallisto { }; + kssd = callPackage ../applications/science/biology/kssd { }; + macse = callPackage ../applications/science/biology/macse { }; migrate = callPackage ../applications/science/biology/migrate { }; @@ -23659,6 +23693,8 @@ in SPAdes = callPackage ../applications/science/biology/spades { }; + svaba = callPackage ../applications/science/biology/svaba { }; + trimal = callPackage ../applications/science/biology/trimal { }; truvari = callPackage ../applications/science/biology/truvari { }; @@ -23888,6 +23924,7 @@ in coqPackages_8_8 coq_8_8 coqPackages_8_9 coq_8_9 coqPackages_8_10 coq_8_10 + coqPackages_8_11 coq_8_11 coqPackages coq ; @@ -24231,8 +24268,8 @@ in ns-3 = callPackage ../development/libraries/science/networking/ns-3 { python = python3; }; root = callPackage ../applications/science/misc/root { + python = python3; inherit (darwin.apple_sdk.frameworks) Cocoa OpenGL; - stdenv = if stdenv.cc.isClang then llvmPackages_5.stdenv else stdenv; }; root5 = lowPrio (callPackage ../applications/science/misc/root/5.nix { @@ -24490,6 +24527,8 @@ in foomatic-filters = callPackage ../misc/drivers/foomatic-filters {}; + fuse-emulator = callPackage ../misc/emulators/fuse-emulator {}; + gajim = callPackage ../applications/networking/instant-messengers/gajim { inherit (gst_all_1) gstreamer gst-plugins-base gst-libav gst-plugins-ugly; }; @@ -24889,9 +24928,7 @@ in sndio = callPackage ../misc/sndio { }; - # Oclgrind 18.3 does not work with newer LLVMs (but HEAD does, so - # fix this after next release). - oclgrind = callPackage ../development/tools/analysis/oclgrind { llvmPackages = llvmPackages_6; }; + oclgrind = callPackage ../development/tools/analysis/oclgrind { }; opkg = callPackage ../tools/package-management/opkg { }; @@ -24960,6 +24997,10 @@ in rfc-bibtex = python3Packages.callPackage ../development/python-modules/rfc-bibtex { }; + pick-colour-picker = python3Packages.callPackage ../applications/graphics/pick-colour-picker { + inherit (pkgs) glib gtk3 gobject-introspection wrapGAppsHook; + }; + rpl = callPackage ../tools/text/rpl { pythonPackages = python3Packages; }; @@ -25186,11 +25227,6 @@ in llvmPackages = llvmPackages_6; }); - vimprobable2-unwrapped = callPackage ../applications/networking/browsers/vimprobable2 { - webkitgtk = webkitgtk24x-gtk2; - }; - vimprobable2 = wrapFirefox vimprobable2-unwrapped { }; - vimb-unwrapped = callPackage ../applications/networking/browsers/vimb { }; vimb = wrapFirefox vimb-unwrapped { }; @@ -25317,11 +25353,7 @@ in xteddy = callPackage ../applications/misc/xteddy { }; - xwiimote = callPackage ../misc/drivers/xwiimote { - bluez = pkgs.bluez5.override { - enableWiimote = true; - }; - }; + xwiimote = callPackage ../misc/drivers/xwiimote { }; xzoom = callPackage ../tools/X11/xzoom {}; @@ -25603,4 +25635,6 @@ in gortr = callPackage ../servers/gortr {}; + sentencepiece = callPackage ../development/libraries/sentencepiece {}; + } diff --git a/pkgs/top-level/coq-packages.nix b/pkgs/top-level/coq-packages.nix index 2cc1750c464..3fa3d30aa94 100644 --- a/pkgs/top-level/coq-packages.nix +++ b/pkgs/top-level/coq-packages.nix @@ -130,6 +130,9 @@ in rec { coq_8_10 = callPackage ../applications/science/logic/coq { version = "8.10.2"; }; + coq_8_11 = callPackage ../applications/science/logic/coq { + version = "8.11+beta1"; + }; coqPackages_8_5 = mkCoqPackages coq_8_5; coqPackages_8_6 = mkCoqPackages coq_8_6; @@ -137,6 +140,7 @@ in rec { coqPackages_8_8 = mkCoqPackages coq_8_8; coqPackages_8_9 = mkCoqPackages coq_8_9; coqPackages_8_10 = mkCoqPackages coq_8_10; + coqPackages_8_11 = mkCoqPackages coq_8_11; coqPackages = recurseIntoAttrs (lib.mapDerivationAttrset lib.dontDistribute coqPackages_8_9 ); diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index ddd13784b5d..f46d953fb48 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -73,6 +73,8 @@ let bigstringaf = callPackage ../development/ocaml-modules/bigstringaf { }; + biocaml = callPackage ../development/ocaml-modules/biocaml { }; + bistro = callPackage ../development/ocaml-modules/bistro { }; bitstring = callPackage ../development/ocaml-modules/bitstring { }; @@ -138,6 +140,8 @@ let cairo2 = callPackage ../development/ocaml-modules/cairo2 { }; + cfstream = callPackage ../development/ocaml-modules/cfstream { }; + charInfo_width = callPackage ../development/ocaml-modules/charInfo_width { }; checkseum = callPackage ../development/ocaml-modules/checkseum { }; @@ -185,6 +189,8 @@ let cpuid = callPackage ../development/ocaml-modules/cpuid { }; + crunch = callPackage ../development/tools/ocaml/crunch { }; + cryptokit = callPackage ../development/ocaml-modules/cryptokit { }; cstruct = @@ -217,6 +223,8 @@ let digestif = callPackage ../development/ocaml-modules/digestif { }; + dispatch = callPackage ../development/ocaml-modules/dispatch { }; + dolmen = callPackage ../development/ocaml-modules/dolmen { }; dolog = callPackage ../development/ocaml-modules/dolog { }; @@ -291,6 +299,10 @@ let gmap = callPackage ../development/ocaml-modules/gmap { }; + gnuplot = callPackage ../development/ocaml-modules/gnuplot { + inherit (pkgs) gnuplot; + }; + herelib = callPackage ../development/ocaml-modules/herelib { }; higlo = callPackage ../development/ocaml-modules/higlo { }; @@ -336,6 +348,14 @@ let gmetadom = callPackage ../development/ocaml-modules/gmetadom { }; + graphql = callPackage ../development/ocaml-modules/graphql { }; + + graphql-cohttp = callPackage ../development/ocaml-modules/graphql/cohttp.nix { }; + + graphql-lwt = callPackage ../development/ocaml-modules/graphql/lwt.nix { }; + + graphql_parser = callPackage ../development/ocaml-modules/graphql/parser.nix { }; + gtktop = callPackage ../development/ocaml-modules/gtktop { }; hex = callPackage ../development/ocaml-modules/hex { }; @@ -424,6 +444,8 @@ let lru = callPackage ../development/ocaml-modules/lru { }; + lua-ml = callPackage ../development/ocaml-modules/lua-ml { }; + lwt2 = callPackage ../development/ocaml-modules/lwt/legacy.nix { }; lwt4 = callPackage ../development/ocaml-modules/lwt/4.x.nix { }; @@ -468,7 +490,9 @@ let metrics-lwt = callPackage ../development/ocaml-modules/metrics/lwt.nix { }; - metrics-unix = callPackage ../development/ocaml-modules/metrics/unix.nix { }; + metrics-unix = callPackage ../development/ocaml-modules/metrics/unix.nix { + inherit (pkgs) gnuplot; + }; mezzo = callPackage ../development/compilers/mezzo { }; @@ -563,6 +587,8 @@ let ocaml_text = callPackage ../development/ocaml-modules/ocaml-text { }; + ocaml-version = callPackage ../development/ocaml-modules/ocaml-version { }; + ocf = callPackage ../development/ocaml-modules/ocf { }; ocp-build = callPackage ../development/tools/ocaml/ocp-build { }; @@ -619,6 +645,8 @@ let pgsolver = callPackage ../development/ocaml-modules/pgsolver { }; + phylogenetics = callPackage ../development/ocaml-modules/phylogenetics { }; + piqi = callPackage ../development/ocaml-modules/piqi { base64 = base64_2; }; @@ -831,6 +859,8 @@ let wasm = callPackage ../development/ocaml-modules/wasm { }; + webmachine = callPackage ../development/ocaml-modules/webmachine { }; + wtf8 = callPackage ../development/ocaml-modules/wtf8 { }; x509 = callPackage ../development/ocaml-modules/x509 { }; diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix index 5b8778ef12b..22249e644e9 100644 --- a/pkgs/top-level/perl-packages.nix +++ b/pkgs/top-level/perl-packages.nix @@ -360,7 +360,7 @@ let doCheck = !stdenv.isLinux; meta = { - homepage = http://search.cpan.org/dist/Apache-AuthCookie/; + homepage = "https://github.com/mschout/apache-authcookie"; description = "Perl Authentication and Authorization via cookies"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -2478,7 +2478,7 @@ let }; buildInputs = [ TestFatal TestNeeds ]; meta = { - homepage = https://github.com/sartak/Class-Method-Modifiers/tree; + homepage = "https://github.com/moose/Class-Method-Modifiers"; description = "Provides Moose-like method modifiers"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -6377,7 +6377,7 @@ let buildInputs = [ FennecLite TestException ]; propagatedBuildInputs = [ MetaBuilder aliased ]; meta = { - homepage = http://open-exodus.net/projects/Exporter-Declare; + homepage = "https://metacpan.org/release/Exporter-Declare"; description = "Exporting done right"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -6418,7 +6418,7 @@ let meta = { description = "Compile and link C code for Perl modules"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; - homepage = "http://search.cpan.org/dist/ExtUtils-CBuilder"; + homepage = "https://metacpan.org/release/ExtUtils-CBuilder"; }; }; @@ -6722,7 +6722,7 @@ let sha256 = "dce28e3932762c2ff92aa52d90405c06e898e81cb7b164ccae8966ae77f1dcab"; }; meta = { - homepage = http://open-exodus.net/projects/Fennec-Lite; + homepage = "https://metacpan.org/release/Fennec-Lite"; description = "Minimalist Fennec, the commonly used bits"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -7140,7 +7140,7 @@ let }; propagatedBuildInputs = [ FileShareDir ]; meta = { - homepage = https://github.com/ingydotnet/file-share-pm/tree; + homepage = "https://github.com/ingydotnet/file-share-pm"; description = "Extend File::ShareDir to Local Libraries"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -7334,7 +7334,7 @@ let sha256 = "b79dc2244b2d97b6f27167fc3b7799ef61a179040f3abd76ce1e0a3b0bc4e078"; }; meta = { - homepage = http://perl.wdlabs.com/File-Which; + homepage = "https://metacpan.org/release/File-Which"; description = "Perl implementation of the which utility as an API"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -8996,7 +8996,7 @@ let sha256 = "0nsd9knlbd7if2v6zwj4q978axq0w5hk8ymp61z14a821hjivqjl"; }; meta = { - homepage = https://github.com/ingydotnet/io-all-pm/tree; + homepage = "https://github.com/ingydotnet/io-all-pm"; description = "IO::All of it to Graham and Damian!"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -12487,7 +12487,7 @@ let buildInputs = [ ModuleBuildTiny TestFatal ]; propagatedBuildInputs = [ Moose aliased namespaceautoclean ]; meta = { - homepage = https://github.com/karenetheridge/moosex-lazyrequire; + homepage = "https://github.com/moose/MooseX-LazyRequire"; description = "Required attributes which fail only when trying to use them"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -12588,7 +12588,7 @@ let buildInputs = [ CPANMetaCheck ModuleBuildTiny TestFatal TestNeeds ]; propagatedBuildInputs = [ Moose namespaceautoclean ]; meta = { - homepage = https://github.com/sartak/MooseX-Role-Parameterized/tree; + homepage = "https://github.com/moose/MooseX-Role-Parameterized"; description = "Roles with composition parameters"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -18850,7 +18850,7 @@ let sha256 = "bb8a3b8ff515c85101baf553a769337f944a05cde81f111ae78aff416bf4ae2b"; }; meta = { - homepage = https://www.shlomifish.org/open-source/projects/Text-Format/; + homepage = "https://metacpan.org/release/Text-Format"; description = "Format text"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; maintainers = with maintainers; [ bcdarwin ]; @@ -19229,7 +19229,7 @@ let sha256 = "ef371b1769cd8d36d2d657e8321723d94c8f8d89e7fd7437c6648c5dc6711b7a"; }; meta = { - homepage = https://github.com/2shortplanks/Test-utf8/tree; + homepage = "https://github.com/2shortplanks/Test-utf8"; description = "Handy utf8 tests"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -19984,7 +19984,7 @@ let }; propagatedBuildInputs = [ URI ]; meta = { - homepage = http://perl.wdlabs.com/URI-ws/; + homepage = "https://metacpan.org/release/URI-ws"; description = "WebSocket support for URI package"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -20131,7 +20131,7 @@ let propagatedBuildInputs = [ HTMLForm HTMLTree LWP ]; doCheck = false; meta = { - homepage = https://github.com/bestpractical/www-mechanize; + homepage = "https://github.com/libwww-perl/WWW-Mechanize"; description = "Handy web browsing in a Perl object"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; @@ -20701,7 +20701,7 @@ let buildInputs = [ TestBase TestDeep TestYAML ]; meta = { - homepage = https://github.com/ingydotnet/yaml-pm/tree; + homepage = "https://github.com/ingydotnet/yaml-pm"; description = "YAML Ain't Markup Language (tm)"; license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; }; diff --git a/pkgs/top-level/php-packages.nix b/pkgs/top-level/php-packages.nix index 41db7109d9f..7beaa43adad 100644 --- a/pkgs/top-level/php-packages.nix +++ b/pkgs/top-level/php-packages.nix @@ -40,10 +40,10 @@ let }; ast = buildPecl { - version = "1.0.3"; + version = "1.0.5"; pname = "ast"; - sha256 = "1sk9bkyw3ck9jgvlazxx8zl2nv6lc0gq66v1rfcby9v0zyydb7xr"; + sha256 = "16c5isldm4csjbcvz1qk2mmrhgvh24sxsp6w6f5a37xpa3vciawp"; }; box = mkDerivation rec { @@ -74,12 +74,12 @@ let }; composer = mkDerivation rec { - version = "1.9.0"; + version = "1.9.1"; pname = "composer"; src = pkgs.fetchurl { url = "https://getcomposer.org/download/${version}/composer.phar"; - sha256 = "0x88bin1c749ajymz2cqjx8660a3wxvndpv4xr6w3pib16fzdpy9"; + sha256 = "04a1fqxhxrckgxw9xbx7mplkzw808k2dz4jqsxq2dy7w6y80n88z"; }; dontUnpack = true; @@ -199,14 +199,35 @@ let sha256 = "00nk14jbdbln93mx3ag691avc11ff94hkadrcv5pn51c6ihsxbmz"; }; + maxminddb = buildPecl rec { + pname = "maxminddb"; + version = "1.5.0"; + + src = pkgs.fetchFromGitHub { + owner = "maxmind"; + repo = "MaxMind-DB-Reader-php"; + rev = "v${version}"; + sha256 = "1ilgpx36rgihjr8s4bvkbms5hl6xy7mymna3ym2bl4lb15vkr0sm"; + }; + + buildInputs = [ pkgs.libmaxminddb ]; + sourceRoot = "source/ext"; + + meta = with pkgs.lib; { + description = "C extension that is a drop-in replacement for MaxMind\\Db\\Reader"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ ajs124 das_j ]; + }; + }; + memcached = buildPecl rec { - version = "3.1.3"; + version = "3.1.5"; pname = "memcached"; src = fetchgit { url = "https://github.com/php-memcached-dev/php-memcached"; rev = "v${version}"; - sha256 = "1w9g8k7bmq3nbzskskpsr5632gh9q75nqy7nkjdzgs17klq9khjk"; + sha256 = "01mbh2m3kfbdvih3c8g3g9h4vdd80r0i9g2z8b3lx3mi8mmcj380"; }; configureFlags = [ @@ -220,9 +241,9 @@ let mongodb = buildPecl { pname = "mongodb"; - version = "1.6.0"; + version = "1.6.1"; - sha256 = "0bybfjs61v66bynajbd8dwjlwbz6p2gck49r3zqbxa3ja6d671l6"; + sha256 = "1j1w4n33347j9kwvxwsrix3gvjbiqcn1s5v59pp64s536cci8q0m"; nativeBuildInputs = [ pkgs.pkgconfig ]; buildInputs = with pkgs; [ @@ -278,12 +299,12 @@ let }; php-cs-fixer = mkDerivation rec { - version = "2.15.3"; + version = "2.16.1"; pname = "php-cs-fixer"; src = pkgs.fetchurl { url = "https://github.com/FriendsOfPHP/PHP-CS-Fixer/releases/download/v${version}/php-cs-fixer.phar"; - sha256 = "0hbc9y3676dd0841llgp1g7bhklfxi1cw47dcww0qmk69gjfv54c"; + sha256 = "1dq1nhy666zg6d4fkfsjwhj1vwh1ncap2c9ljplxv98a9mm6fk68"; }; phases = [ "installPhase" ]; @@ -354,12 +375,12 @@ let }; phpcbf = mkDerivation rec { - version = "3.5.1"; + version = "3.5.3"; pname = "phpcbf"; src = pkgs.fetchurl { url = "https://github.com/squizlabs/PHP_CodeSniffer/releases/download/${version}/phpcbf.phar"; - sha256 = "1b68cmdvg356s2vk5q0jkk8sizza7r7pbcl9v5s0944wi0apsj0r"; + sha256 = "1mrsf9p6p64pyqyylnlxb2b7cirdfccch83g7yhfnka3znffq86v"; }; phases = [ "installPhase" ]; @@ -381,12 +402,12 @@ let }; phpcs = mkDerivation rec { - version = "3.5.1"; + version = "3.5.3"; pname = "phpcs"; src = pkgs.fetchurl { url = "https://github.com/squizlabs/PHP_CodeSniffer/releases/download/${version}/phpcs.phar"; - sha256 = "060jzgd99j16xjs0n75sgp79an6n7qp6zv5lrw6700jnw67zpmn7"; + sha256 = "0y4nhsifj4pdmf5g1nnm4951yjgiqswyz7wmjxx6kqiqc7chlkml"; }; phases = [ "installPhase" ]; @@ -408,12 +429,12 @@ let }; phpstan = mkDerivation rec { - version = "0.11.19"; + version = "0.12.3"; pname = "phpstan"; src = pkgs.fetchurl { url = "https://github.com/phpstan/phpstan/releases/download/${version}/phpstan.phar"; - sha256 = "0b04d2x07vipx1850v3d2hga3s6ssv7g21x58dhcjrg35i1bvq71"; + sha256 = "08ya50qf75nq8ypyhb0vsqnj166kc27rc8iasxr3y7kssbfd95ai"; }; phases = [ "installPhase" ]; @@ -436,7 +457,7 @@ let actual line. ''; license = licenses.mit; - homepage = https://github.com/phpstan/phpstan; + homepage = "https://github.com/phpstan/phpstan"; maintainers = with maintainers; [ etu ]; }; }; @@ -486,10 +507,10 @@ let }; protobuf = buildPecl { - version = "3.9.0"; + version = "3.11.1"; pname = "protobuf"; - sha256 = "1pyfxrfdbzzg5al4byyazdrvy7yad13zwq7papbb2d8gkvc3f3kh"; + sha256 = "1dv2hln2rifjlljry4b7qqx3gx68fm0a6nf66sh4ls2p9if1jzp2"; buildInputs = with pkgs; [ (if isPhp73 then pcre2 else pcre) ]; @@ -504,12 +525,12 @@ let }; psalm = mkDerivation rec { - version = "3.5.3"; + version = "3.7.2"; pname = "psalm"; src = pkgs.fetchurl { url = "https://github.com/vimeo/psalm/releases/download/${version}/psalm.phar"; - sha256 = "1n5pfzln82wzk1qa40c436lhbin1g06lfdk89q720yzrrs07r8sw"; + sha256 = "0mcxlckycvpxxc6h0x0kdidbq2l4m3xws1v3kdf797js234x0vjx"; }; phases = [ "installPhase" ]; @@ -530,12 +551,12 @@ let }; psysh = mkDerivation rec { - version = "0.9.9"; + version = "0.9.12"; pname = "psysh"; src = pkgs.fetchurl { url = "https://github.com/bobthecow/psysh/releases/download/v${version}/psysh-v${version}.tar.gz"; - sha256 = "0knbib0afwq2z5fc639ns43x8pi3kmp85y13bkcl00dhvf46yinw"; + sha256 = "0bzmc94li481xk81gv460ipq9zl03skbnq8m3rnw34i2c04hxczc"; }; phases = [ "installPhase" ]; @@ -587,10 +608,10 @@ let }; redis = buildPecl { - version = "5.0.2"; + version = "5.1.1"; pname = "redis"; - sha256 = "0b5pw17lzqknhijfymksvf8fm1zilppr97ypb31n599jw3mxf62f"; + sha256 = "1041zv91fkda73w4c3pj6zdvwjgb3q7mxg6mwnq9gisl80mrs732"; }; sqlsrv = buildPecl { @@ -627,10 +648,10 @@ let }; xdebug = buildPecl { - version = "2.8.0"; + version = "2.8.1"; pname = "xdebug"; - sha256 = "0r62501fdp63zz81scz2x1pq3qzpjafya96g12j0jx7crdz127fb"; + sha256 = "080mwr7m72rf0jsig5074dgq2n86hhs7rdbfg6yvnm959sby72w3"; doCheck = true; checkTarget = "test"; diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index db57b33dfd0..ed66a20db53 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -165,6 +165,8 @@ in { aioredis = callPackage ../development/python-modules/aioredis { }; + aiorun = callPackage ../development/python-modules/aiorun { }; + ansicolor = callPackage ../development/python-modules/ansicolor { }; ansiwrap = callPackage ../development/python-modules/ansiwrap { }; @@ -179,10 +181,14 @@ in { apprise = callPackage ../development/python-modules/apprise { }; + arrayqueues = callPackage ../development/python-modules/arrayqueues { }; + aresponses = callPackage ../development/python-modules/aresponses { }; argon2_cffi = callPackage ../development/python-modules/argon2_cffi { }; + arviz = callPackage ../development/python-modules/arviz { }; + asana = callPackage ../development/python-modules/asana { }; asdf = callPackage ../development/python-modules/asdf { }; @@ -227,6 +233,7 @@ in { automat = callPackage ../development/python-modules/automat { }; awkward = callPackage ../development/python-modules/awkward { }; + awkward1 = callPackage ../development/python-modules/awkward1 { }; aws-sam-translator = callPackage ../development/python-modules/aws-sam-translator { }; @@ -792,6 +799,8 @@ in { manhole = callPackage ../development/python-modules/manhole { }; + mapbox = callPackage ../development/python-modules/mapbox { }; + markerlib = callPackage ../development/python-modules/markerlib { }; matchpy = callPackage ../development/python-modules/matchpy { }; @@ -912,6 +921,8 @@ in { poetry = callPackage ../development/python-modules/poetry { }; + polyline = callPackage ../development/python-modules/polyline { }; + postorius = disabledIf (!isPy3k) (callPackage ../servers/mail/mailman/postorius.nix { }); pplpy = callPackage ../development/python-modules/pplpy { }; @@ -1063,6 +1074,8 @@ in { pymatgen-lammps = callPackage ../development/python-modules/pymatgen-lammps { }; + pymavlink = callPackage ../development/python-modules/pymavlink { }; + pymsgbox = callPackage ../development/python-modules/pymsgbox { }; pynisher = callPackage ../development/python-modules/pynisher { }; @@ -1139,7 +1152,7 @@ in { pytesseract = callPackage ../development/python-modules/pytesseract { }; pytest-bdd = callPackage ../development/python-modules/pytest-bdd { }; - + pytest-black = callPackage ../development/python-modules/pytest-black { }; pytest-click = callPackage ../development/python-modules/pytest-click { }; @@ -1268,6 +1281,14 @@ in { selectors2 = callPackage ../development/python-modules/selectors2 { }; + sacremoses = callPackage ../development/python-modules/sacremoses { }; + + sentencepiece = callPackage ../development/python-modules/sentencepiece { + inherit (pkgs) sentencepiece pkgconfig; + }; + + transformers = callPackage ../development/python-modules/transformers { }; + sentinel = callPackage ../development/python-modules/sentinel { }; sentry-sdk = callPackage ../development/python-modules/sentry-sdk {}; @@ -1318,6 +1339,12 @@ in { stumpy = callPackage ../development/python-modules/stumpy { }; + stups-cli-support = callPackage ../development/python-modules/stups-cli-support { }; + + stups-tokens = callPackage ../development/python-modules/stups-tokens { }; + + stups-zign = callPackage ../development/python-modules/stups-zign { }; + sumo = callPackage ../development/python-modules/sumo { }; supervise_api = callPackage ../development/python-modules/supervise_api { }; @@ -1714,10 +1741,14 @@ in { colorlog = callPackage ../development/python-modules/colorlog { }; + colorspacious = callPackage ../development/python-modules/colorspacious { }; + colour = callPackage ../development/python-modules/colour {}; configshell = callPackage ../development/python-modules/configshell { }; + consonance = callPackage ../development/python-modules/consonance { }; + constantly = callPackage ../development/python-modules/constantly { }; cornice = callPackage ../development/python-modules/cornice { }; @@ -1726,6 +1757,8 @@ in { crc16 = callPackage ../development/python-modules/crc16 { }; + crccheck = callPackage ../development/python-modules/crccheck { }; + croniter = callPackage ../development/python-modules/croniter { }; csscompressor = callPackage ../development/python-modules/csscompressor {}; @@ -1883,6 +1916,8 @@ in { cartopy = callPackage ../development/python-modules/cartopy {}; + casbin = callPackage ../development/python-modules/casbin { }; + case = callPackage ../development/python-modules/case {}; cbor = callPackage ../development/python-modules/cbor {}; @@ -2017,6 +2052,8 @@ in { envs = callPackage ../development/python-modules/envs { }; + etelemetry = callPackage ../development/python-modules/etelemetry { }; + eth-hash = callPackage ../development/python-modules/eth-hash { }; eth-typing = callPackage ../development/python-modules/eth-typing { }; @@ -2270,6 +2307,10 @@ in { zict = callPackage ../development/python-modules/zict { }; + zigpy = callPackage ../development/python-modules/zigpy { }; + + zigpy-deconz = callPackage ../development/python-modules/zigpy-deconz { }; + digital-ocean = callPackage ../development/python-modules/digitalocean { }; leather = callPackage ../development/python-modules/leather { }; @@ -2449,6 +2490,8 @@ in { filetype = callPackage ../development/python-modules/filetype { }; + flammkuchen = callPackage ../development/python-modules/flammkuchen { }; + flexmock = callPackage ../development/python-modules/flexmock { }; flit = callPackage ../development/python-modules/flit { }; @@ -2649,10 +2692,6 @@ in { latexcodec = callPackage ../development/python-modules/latexcodec {}; - libsexy = callPackage ../development/python-modules/libsexy { - inherit (pkgs) libsexy pkgconfig; - }; - libselinux = pipe pkgs.libselinux [ toPythonModule @@ -2682,6 +2721,8 @@ in { lightning = callPackage ../development/python-modules/lightning { }; + lightparam = callPackage ../development/python-modules/lightparam { }; + jupyter = callPackage ../development/python-modules/jupyter { }; jupyter_console = if pythonOlder "3.5" then @@ -4132,6 +4173,8 @@ in { nibabel = callPackage ../development/python-modules/nibabel {}; + nidaqmx = callPackage ../development/python-modules/nidaqmx { }; + nilearn = callPackage ../development/python-modules/nilearn {}; nimfa = callPackage ../development/python-modules/nimfa {}; @@ -4307,6 +4350,8 @@ in { aioeventlet = callPackage ../development/python-modules/aioeventlet { }; + aiokafka = callPackage ../development/python-modules/aiokafka { }; + olefile = callPackage ../development/python-modules/olefile { }; requests-mock = callPackage ../development/python-modules/requests-mock { }; @@ -4810,6 +4855,8 @@ in { pyserial = callPackage ../development/python-modules/pyserial {}; + pyserial-asyncio = callPackage ../development/python-modules/pyserial-asyncio { }; + pysonos = callPackage ../development/python-modules/pysonos {}; pymongo = callPackage ../development/python-modules/pymongo {}; @@ -4846,8 +4893,6 @@ in { pywal = callPackage ../development/python-modules/pywal { }; - pywebkitgtk = callPackage ../development/python-modules/pywebkitgtk { }; - pywinrm = callPackage ../development/python-modules/pywinrm { }; pyxattr = callPackage ../development/python-modules/pyxattr { }; @@ -4914,6 +4959,8 @@ in { qds_sdk = callPackage ../development/python-modules/qds_sdk { }; + qimage2ndarray = callPackage ../development/python-modules/qimage2ndarray { }; + quamash = callPackage ../development/python-modules/quamash { }; quandl = callPackage ../development/python-modules/quandl { }; @@ -5025,10 +5072,6 @@ in { Pyro4 = callPackage ../development/python-modules/pyro4 { }; - root_numpy = callPackage ../development/python-modules/root_numpy { }; - - rootpy = callPackage ../development/python-modules/rootpy { }; - rope = callPackage ../development/python-modules/rope { }; ropper = callPackage ../development/python-modules/ropper { }; @@ -5228,6 +5271,8 @@ in { structlog = callPackage ../development/python-modules/structlog { }; + stytra = callPackage ../development/python-modules/stytra { }; + sybil = callPackage ../development/python-modules/sybil { }; # legacy alias @@ -5405,6 +5450,11 @@ in { xapian = callPackage ../development/python-modules/xapian { xapian = pkgs.xapian; }; + xapp = callPackage ../development/python-modules/xapp { + inherit (pkgs) gtk3 gobject-introspection polkit; + inherit (pkgs.cinnamon) xapps; + }; + xlwt = callPackage ../development/python-modules/xlwt { }; xxhash = callPackage ../development/python-modules/xxhash { }; @@ -5697,6 +5747,8 @@ in { twitter-common-options = callPackage ../development/python-modules/twitter-common-options { }; + python-twitter = callPackage ../development/python-modules/python-twitter { }; + umalqurra = callPackage ../development/python-modules/umalqurra { }; unicodecsv = callPackage ../development/python-modules/unicodecsv { }; @@ -5763,6 +5815,8 @@ in { zfec = callPackage ../development/python-modules/zfec { }; + zha-quirks = callPackage ../development/python-modules/zha-quirks { }; + zipp = callPackage ../development/python-modules/zipp { }; zope_broken = callPackage ../development/python-modules/zope_broken { }; @@ -6117,6 +6171,8 @@ in { inherit (pkgs) udev libusb1; }; + ckcc-protocol = callPackage ../development/python-modules/ckcc-protocol { }; + mnemonic = callPackage ../development/python-modules/mnemonic { }; keepkey = callPackage ../development/python-modules/keepkey { }; @@ -6199,9 +6255,10 @@ in { cudnn = pkgs.cudnn_cudatoolkit_10; nccl = pkgs.nccl_cudatoolkit_10; openssl = pkgs.openssl_1_0_2; + inherit (pkgs.darwin.apple_sdk.frameworks) Foundation Security; }; - tensorflow = if stdenv.isDarwin then self.tensorflow-bin else self.tensorflow-build; + tensorflow = self.tensorflow-build; tensorflowWithoutCuda = self.tensorflow.override { cudaSupport = false; @@ -6383,6 +6440,8 @@ in { diskcache = callPackage ../development/python-modules/diskcache { }; + dissononce = callPackage ../development/python-modules/dissononce { }; + distro = callPackage ../development/python-modules/distro { }; bz2file = callPackage ../development/python-modules/bz2file { }; diff --git a/pkgs/top-level/static.nix b/pkgs/top-level/static.nix index 98a75e2df87..687086b6ed3 100644 --- a/pkgs/top-level/static.nix +++ b/pkgs/top-level/static.nix @@ -115,14 +115,15 @@ in { } // optionalAttrs super.stdenv.hostPlatform.isDarwin { pythonSupport = false; }); - zlib = (super.zlib.override { + zlib = super.zlib.override { static = true; shared = false; + splitStaticOutput = false; # Don’t use new stdenv zlib because # it doesn’t like the --disable-shared flag stdenv = super.stdenv; - }).static; + }; xz = super.xz.override { enableStatic = true; }; @@ -214,6 +215,10 @@ in { gssSupport = false; }; + e2fsprogs = super.e2fsprogs.override { + shared = false; + }; + brotli = super.brotli.override { staticOnly = true; }; |