diff options
Diffstat (limited to 'pkgs')
560 files changed, 18863 insertions, 10638 deletions
diff --git a/pkgs/applications/audio/ardour/5.nix b/pkgs/applications/audio/ardour/5.nix deleted file mode 100644 index b25f9339da1..00000000000 --- a/pkgs/applications/audio/ardour/5.nix +++ /dev/null @@ -1,161 +0,0 @@ -{ lib, stdenv -, fetchgit -, alsa-lib -, aubio -, boost -, cairomm -, curl -, doxygen -, fftwSinglePrec -, flac -, glibmm -, graphviz -, gtkmm2 -, libjack2 -, liblo -, libogg -, libsamplerate -, libsigcxx -, libsndfile -, libusb1 -, fluidsynth_1 -, hidapi -, libltc -, qm-dsp -, libxml2 -, lilv -, lrdf -, lv2 -, perl -, pkg-config -, itstool -, python2 -, rubberband -, serd -, sord -, sratom -, taglib -, vamp-plugin-sdk -, dbus -, fftw -, pango -, suil -, libarchive -, wafHook -}: -let - # Ardour git repo uses a mix of annotated and lightweight tags. Annotated - # tags are used for MAJOR.MINOR versioning, and lightweight tags are used - # in-between; MAJOR.MINOR.REV where REV is the number of commits since the - # last annotated tag. A slightly different version string format is needed - # for the 'revision' info that is built into the binary; it is the format of - # "git describe" when _not_ on an annotated tag(!): MAJOR.MINOR-REV-HASH. - - # Version to build. - tag = "5.12"; -in stdenv.mkDerivation rec { - pname = "ardour_5"; - version = "5.12"; - - src = fetchgit { - url = "git://git.ardour.org/ardour/ardour.git"; - rev = "ae0dcdc0c5d13483271065c360e378202d20170a"; - sha256 = "0mla5lm51ryikc2rrk53max2m7a5ds6i1ai921l2h95wrha45nkr"; - }; - - nativeBuildInputs = [ - wafHook - pkg-config - itstool - doxygen - graphviz # for dot - perl - python2 - ]; - - buildInputs = [ - alsa-lib - aubio - boost - cairomm - curl - dbus - fftw - fftwSinglePrec - flac - glibmm - gtkmm2 - libjack2 - liblo - libogg - libsamplerate - libsigcxx - libsndfile - libusb1 - fluidsynth_1 - hidapi - libltc - qm-dsp - libxml2 - lilv - lrdf - lv2 - pango - rubberband - serd - sord - sratom - suil - taglib - vamp-plugin-sdk - libarchive - ]; - - wafConfigureFlags = [ - "--optimize" - "--docs" - "--use-external-libs" - "--freedesktop" - "--with-backends=jack,alsa,dummy" - ]; - - NIX_CFLAGS_COMPILE = "-I${qm-dsp}/include/qm-dsp"; - - # ardour's wscript has a "tarball" target but that required the git revision - # be available. Since this is an unzipped tarball fetched from github we - # have to do that ourself. - postPatch = '' - printf '#include "libs/ardour/ardour/revision.h"\nnamespace ARDOUR { const char* revision = \"${tag}-${builtins.substring 0 8 src.rev}\"; }\n' > libs/ardour/revision.cc - patchShebangs ./tools/ - ''; - - postInstall = '' - # wscript does not install these for some reason - install -vDm 644 "build/gtk2_ardour/ardour.xml" \ - -t "$out/share/mime/packages" - install -vDm 644 "build/gtk2_ardour/ardour5.desktop" \ - -t "$out/share/applications" - for size in 16 22 32 48 256 512; do - install -vDm 644 "gtk2_ardour/resources/Ardour-icon_''${size}px.png" \ - "$out/share/icons/hicolor/''${size}x''${size}/apps/ardour5.png" - done - install -vDm 644 "ardour.1"* -t "$out/share/man/man1" - ''; - - meta = with lib; { - description = "Multi-track hard disk recording software"; - longDescription = '' - Ardour is a digital audio workstation (DAW), You can use it to - record, edit and mix multi-track audio and midi. Produce your - own CDs. Mix video soundtracks. Experiment with new ideas about - music and sound. - - Please consider supporting the ardour project financially: - https://community.ardour.org/donate - ''; - homepage = "https://ardour.org/"; - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = with maintainers; [ goibhniu fps ]; - }; -} diff --git a/pkgs/applications/audio/blanket/default.nix b/pkgs/applications/audio/blanket/default.nix new file mode 100644 index 00000000000..b343953f3f8 --- /dev/null +++ b/pkgs/applications/audio/blanket/default.nix @@ -0,0 +1,69 @@ +{ lib +, stdenv +, fetchFromGitHub +, meson +, ninja +, pkg-config +, wrapGAppsHook +, desktop-file-utils +, appstream-glib +, python3Packages +, glib +, gtk3 +, libhandy +, gobject-introspection +, gst_all_1 +}: + +python3Packages.buildPythonApplication rec { + pname = "blanket"; + version = "0.5.0"; + + src = fetchFromGitHub { + owner = "rafaelmardojai"; + repo = "blanket"; + rev = version; + sha256 = "00i821zqfbigxmc709322r16z75qsw4rg23yhv35gza9sl65bzkg"; + }; + + nativeBuildInputs = [ + meson + ninja + pkg-config + wrapGAppsHook + desktop-file-utils + appstream-glib + ]; + + buildInputs = [ + glib + gtk3 + libhandy + gobject-introspection + gst_all_1.gstreamer + gst_all_1.gst-plugins-base + gst_all_1.gst-plugins-good + gst_all_1.gst-plugins-bad + ]; + + propagatedBuildInputs = with python3Packages; [ + pygobject3 + ]; + + # Broken with gobject-introspection setup hook + # https://github.com/NixOS/nixpkgs/issues/56943 + strictDeps = false; + format = "other"; + + postPatch = '' + patchShebangs build-aux/meson/postinstall.py + ''; + + meta = with lib; { + homepage = "https://github.com/rafaelmardojai/blanket"; + description = "Listen to different sounds"; + maintainers = with maintainers; [ onny ]; + license = licenses.gpl3Plus; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/audio/noisetorch/default.nix b/pkgs/applications/audio/noisetorch/default.nix index 05e17bf7c98..b24c2eebcf7 100644 --- a/pkgs/applications/audio/noisetorch/default.nix +++ b/pkgs/applications/audio/noisetorch/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "NoiseTorch"; - version = "0.11.3"; + version = "0.11.4"; src = fetchFromGitHub { owner = "lawl"; repo = "NoiseTorch"; rev = version; - sha256 = "0rjs6hbi7dvd179lzjmvqy4rv4pbc9amgzb8jfky4yc0zh8xf5z5"; + sha256 = "sha256-3+Yk7dqD7eyvd1I5CMmrg085ZtFxD2EnGqL5ttwx8eM="; }; vendorSha256 = null; diff --git a/pkgs/applications/audio/spot/default.nix b/pkgs/applications/audio/spot/default.nix index 2859a2e942e..aa7a041f40c 100644 --- a/pkgs/applications/audio/spot/default.nix +++ b/pkgs/applications/audio/spot/default.nix @@ -10,8 +10,9 @@ , rustPlatform , pkg-config , glib +, libadwaita , libhandy -, gtk3 +, gtk4 , openssl , alsa-lib , libpulseaudio @@ -20,19 +21,19 @@ stdenv.mkDerivation rec { pname = "spot"; - version = "0.1.14"; + version = "0.2.0"; src = fetchFromGitHub { owner = "xou816"; repo = "spot"; rev = version; - sha256 = "eHhbm1amTx3ngqsP32uDEdrhrBeurMftg5SToTQGX9o="; + sha256 = "16pri0in514xzy21bsijyvyyjwa0f6lg4zyizmdcmcdw4glrs11m"; }; cargoDeps = rustPlatform.fetchCargoTarball { inherit src; name = "${pname}-${version}"; - hash = "sha256-jY7pWoY9IJi5hHVRS1gQKb+Vmfc+wxHvoAwupOtXXQs="; + sha256 = "1fvnidxh4rnkzqg3qjk3zlkp2d41qdamm0bfavk8jrazw8sgih84"; }; nativeBuildInputs = [ @@ -41,7 +42,7 @@ stdenv.mkDerivation rec { ninja pkg-config python3 # for meson postinstall script - gtk3 # for gtk-update-icon-cache + gtk4 # for gtk-update-icon-cache glib # for glib-compile-schemas desktop-file-utils rustPlatform.rust.cargo @@ -52,13 +53,17 @@ stdenv.mkDerivation rec { buildInputs = [ glib - gtk3 + gtk4 + libadwaita libhandy openssl alsa-lib libpulseaudio ]; + # https://github.com/xou816/spot/issues/313 + mesonBuildType = "release"; + postPatch = '' chmod +x build-aux/cargo.sh patchShebangs build-aux/cargo.sh build-aux/meson/postinstall.py @@ -74,6 +79,6 @@ stdenv.mkDerivation rec { description = "Native Spotify client for the GNOME desktop"; homepage = "https://github.com/xou816/spot"; license = licenses.mit; - maintainers = with maintainers; [ jtojnar ]; + maintainers = with maintainers; [ jtojnar tomfitzhenry ]; }; } diff --git a/pkgs/applications/blockchains/bisq-desktop/default.nix b/pkgs/applications/blockchains/bisq-desktop/default.nix index 832c453ce7c..4077442b341 100644 --- a/pkgs/applications/blockchains/bisq-desktop/default.nix +++ b/pkgs/applications/blockchains/bisq-desktop/default.nix @@ -35,11 +35,11 @@ let in stdenv.mkDerivation rec { pname = "bisq-desktop"; - version = "1.7.3"; + version = "1.7.4"; src = fetchurl { url = "https://github.com/bisq-network/bisq/releases/download/v${version}/Bisq-64bit-${version}.deb"; - sha256 = "1q250lj0ig6aqd1dfc335z8pjj7qa7l75kws6d78k3wchzmk7jrk"; + sha256 = "1yhxq6pv8hc0pz8g993a9nng2srnmmajkqxf0lfvkypy13k9zdg4"; }; nativeBuildInputs = [ makeWrapper copyDesktopItems imagemagick dpkg gnutar zip xz ]; diff --git a/pkgs/applications/blockchains/ledger-live-desktop/default.nix b/pkgs/applications/blockchains/ledger-live-desktop/default.nix index acf03368d3c..89e0a9291d1 100644 --- a/pkgs/applications/blockchains/ledger-live-desktop/default.nix +++ b/pkgs/applications/blockchains/ledger-live-desktop/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, appimageTools, imagemagick }: +{ lib, fetchurl, appimageTools, imagemagick, systemd }: let pname = "ledger-live-desktop"; @@ -13,9 +13,22 @@ let appimageContents = appimageTools.extractType2 { inherit name src; }; -in appimageTools.wrapType2 rec { + + # Hotplug events from udevd are fired into the kernel, which then re-broadcasts them over a + # special socket, to every libudev client listening for hotplug when the kernel does that. It will + # try to preserve the uid of the sender but a non-root namespace (like the fhs-env) cant map root + # to a uid, for security reasons, so the uid of the sender becomes nobody and libudev actively + # rejects such messages. This patch disables that bit of security in libudev. + # See: https://github.com/NixOS/nixpkgs/issues/116361 + systemdPatched = systemd.overrideAttrs ({ patches ? [ ], ... }: { + patches = patches ++ [ ./systemd.patch ]; + }); +in +appimageTools.wrapType2 rec { inherit name src; + extraPkgs = pkgs: [ systemdPatched ]; + extraInstallCommands = '' mv $out/bin/${name} $out/bin/${pname} install -m 444 -D ${appimageContents}/ledger-live-desktop.desktop $out/share/applications/ledger-live-desktop.desktop diff --git a/pkgs/applications/blockchains/ledger-live-desktop/systemd.patch b/pkgs/applications/blockchains/ledger-live-desktop/systemd.patch new file mode 100644 index 00000000000..a70053d7118 --- /dev/null +++ b/pkgs/applications/blockchains/ledger-live-desktop/systemd.patch @@ -0,0 +1,14 @@ +diff --git a/src/libsystemd/sd-device/device-monitor.c b/src/libsystemd/sd-device/device-monitor.c +index fd5900704d..f9106fdbe5 100644 +--- a/src/libsystemd/sd-device/device-monitor.c ++++ b/src/libsystemd/sd-device/device-monitor.c +@@ -445,9 +445,6 @@ int device_monitor_receive_device(sd_device_monitor *m, sd_device **ret) { + "sd-device-monitor: No sender credentials received, message ignored."); + + cred = (struct ucred*) CMSG_DATA(cmsg); +- if (cred->uid != 0) +- return log_debug_errno(SYNTHETIC_ERRNO(EAGAIN), +- "sd-device-monitor: Sender uid="UID_FMT", message ignored.", cred->uid); + + if (streq(buf.raw, "libudev")) { + /* udev message needs proper version magic */ diff --git a/pkgs/applications/blockchains/polkadot/default.nix b/pkgs/applications/blockchains/polkadot/default.nix index 656c5974bea..54e45a432f7 100644 --- a/pkgs/applications/blockchains/polkadot/default.nix +++ b/pkgs/applications/blockchains/polkadot/default.nix @@ -7,16 +7,16 @@ }: rustPlatform.buildRustPackage rec { pname = "polkadot"; - version = "0.9.9-1"; + version = "0.9.10"; src = fetchFromGitHub { owner = "paritytech"; repo = "polkadot"; rev = "v${version}"; - sha256 = "sha256-EmnrwBMHb9jpEZAG393yyMaFRRQJ6YYDRvsp+ATT7MY="; + sha256 = "1iBA7R63g0UOuCmnFONc9j/7jfcHA54jJ327AL/aPIE="; }; - cargoHash = "sha256-WzsaUrqe7F4x+ShqG14kq78MTSWIxIMRa3pdr3RXrwk="; + cargoSha256 = "1ysbyv323qmpswbnd2lvisrwnk30l4zvcidh866nrk6b6jqjag42"; nativeBuildInputs = [ clang ]; diff --git a/pkgs/applications/blockchains/zcash/default.nix b/pkgs/applications/blockchains/zcash/default.nix index 298b678a316..99c9d6dccdb 100644 --- a/pkgs/applications/blockchains/zcash/default.nix +++ b/pkgs/applications/blockchains/zcash/default.nix @@ -1,24 +1,24 @@ { rust, rustPlatform, stdenv, lib, fetchFromGitHub, autoreconfHook, makeWrapper -, cargo, pkg-config, curl, coreutils, boost174, db62, hexdump, libsodium +, cargo, pkg-config, curl, coreutils, boost175, db62, hexdump, libsodium , libevent, utf8cpp, util-linux, withDaemon ? true, withMining ? true , withUtils ? true, withWallet ? true, withZmq ? true, zeromq }: rustPlatform.buildRustPackage.override { stdenv = stdenv; } rec { pname = "zcash"; - version = "4.4.1"; + version = "4.5.0"; src = fetchFromGitHub { owner = "zcash"; repo = "zcash"; rev = "v${version}"; - sha256 = "0nhrjizx518khrl8aygag6a1ianzzqpchasggi963f807kv7ipb7"; + sha256 = "0zn6ms2c4mh64cckjg88v0byy2ck116z5g4y82hh34mz3r11d9mn"; }; - cargoSha256 = "101j8cn2lg3l1gn53yg3svzwx783z331g9kzn9ici4azindyx903"; + cargoSha256 = "16il7napj7ryxsap6icvdpvagm9mvgz2mpshny9wn56y60qaymd0"; nativeBuildInputs = [ autoreconfHook cargo hexdump makeWrapper pkg-config ]; - buildInputs = [ boost174 libevent libsodium utf8cpp ] + buildInputs = [ boost175 libevent libsodium utf8cpp ] ++ lib.optional withWallet db62 ++ lib.optional withZmq zeromq; @@ -37,7 +37,7 @@ rustPlatform.buildRustPackage.override { stdenv = stdenv; } rec { configureFlags = [ "--disable-tests" - "--with-boost-libdir=${lib.getLib boost174}/lib" + "--with-boost-libdir=${lib.getLib boost175}/lib" "CXXFLAGS=-I${lib.getDev utf8cpp}/include/utf8cpp" "RUST_TARGET=${rust.toRustTargetSpec stdenv.hostPlatform}" ] ++ lib.optional (!withWallet) "--disable-wallet" diff --git a/pkgs/applications/editors/apostrophe/default.nix b/pkgs/applications/editors/apostrophe/default.nix index df0be4ccfbe..e5cfeb964bd 100644 --- a/pkgs/applications/editors/apostrophe/default.nix +++ b/pkgs/applications/editors/apostrophe/default.nix @@ -1,8 +1,8 @@ -{ lib, stdenv, fetchFromGitLab, meson, ninja, cmake +{ lib, stdenv, fetchFromGitLab, meson, ninja , wrapGAppsHook, pkg-config, desktop-file-utils , appstream-glib, pythonPackages, glib, gobject-introspection , gtk3, webkitgtk, glib-networking, gnome, gspell, texlive -, shared-mime-info, libhandy, fira +, shared-mime-info, libhandy, fira, sassc }: let @@ -13,18 +13,18 @@ let in stdenv.mkDerivation rec { pname = "apostrophe"; - version = "2.4"; + version = "2.5"; src = fetchFromGitLab { - owner = "somas"; + owner = "World"; repo = pname; domain = "gitlab.gnome.org"; rev = "v${version}"; - sha256 = "1qzy3zhi18wf42m034s8kcmx9gl05j620x3hf6rnycq2fvy7g4gz"; + sha256 = "06yfiflmj3ip7ppcz41nb3xpgb5ggw5h74w0v87yaqqkq7qh31lp"; }; - nativeBuildInputs = [ meson ninja cmake pkg-config desktop-file-utils - appstream-glib wrapGAppsHook ]; + nativeBuildInputs = [ meson ninja pkg-config desktop-file-utils + appstream-glib wrapGAppsHook sassc ]; buildInputs = [ glib pythonEnv gobject-introspection gtk3 gnome.adwaita-icon-theme webkitgtk gspell texlive @@ -49,7 +49,7 @@ in stdenv.mkDerivation rec { ''; meta = with lib; { - homepage = "https://gitlab.gnome.org/somas/apostrophe"; + homepage = "https://gitlab.gnome.org/World/apostrophe"; description = "A distraction free Markdown editor for GNU/Linux"; license = licenses.gpl3; platforms = platforms.linux; diff --git a/pkgs/applications/editors/emacs/elisp-packages/bqn-mode/default.nix b/pkgs/applications/editors/emacs/elisp-packages/bqn-mode/default.nix index a12eee62fec..24a6e4f344e 100644 --- a/pkgs/applications/editors/emacs/elisp-packages/bqn-mode/default.nix +++ b/pkgs/applications/editors/emacs/elisp-packages/bqn-mode/default.nix @@ -5,13 +5,13 @@ trivialBuild { pname = "bqn-mode"; - version = "0.0.0+unstable=-2021-09-15"; + version = "0.0.0+unstable=2021-09-26"; src = fetchFromGitHub { owner = "mlochbaum"; repo = "BQN"; - rev = "fb6ec1d8b083cd2b335828ae22e978b1b13986fa"; - hash = "sha256-57ryT5gb7hToAJOiGjjgU87rmlswjPK9tV1iQzJ4C0Y="; + rev = "97cbdc67fe6a9652c42daefadd658cc41c1e5ae3"; + sha256 = "09nmsl7gzyi56g0x459a6571c8nsafl0g350m0hk1vy2gpg6yq0p"; }; postUnpack = '' diff --git a/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix b/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix index 753428f9cc8..e3ce4e5c873 100644 --- a/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix +++ b/pkgs/applications/editors/emacs/elisp-packages/elpa-generated.nix @@ -711,10 +711,10 @@ elpaBuild { pname = "crdt"; ename = "crdt"; - version = "0.1.4"; + version = "0.2.5"; src = fetchurl { - url = "https://elpa.gnu.org/packages/crdt-0.1.4.tar"; - sha256 = "1qqfjvkajwhdhz0jhqixdn68l1rl02pn2fmxizzsv0as20v0ay0r"; + url = "https://elpa.gnu.org/packages/crdt-0.2.5.tar"; + sha256 = "092f82kq78c9gih6xri4n3ma5ixw9c8mx12i00c174g0v041r6sp"; }; packageRequires = []; meta = { @@ -756,10 +756,10 @@ elpaBuild { pname = "csv-mode"; ename = "csv-mode"; - version = "1.15"; + version = "1.16"; src = fetchurl { - url = "https://elpa.gnu.org/packages/csv-mode-1.15.tar"; - sha256 = "0pigqhqg5mfza6jdskcr9yvrzdxnd68iyp3vyb8p8wskdacmbiyx"; + url = "https://elpa.gnu.org/packages/csv-mode-1.16.tar"; + sha256 = "1i43b2p31xhrf97xbdi35y550ysp69fasa5gcrhg6iyxw176807p"; }; packageRequires = [ cl-lib emacs ]; meta = { @@ -831,10 +831,10 @@ elpaBuild { pname = "debbugs"; ename = "debbugs"; - version = "0.28"; + version = "0.29"; src = fetchurl { - url = "https://elpa.gnu.org/packages/debbugs-0.28.tar"; - sha256 = "1qks38hpg3drhxzw66n5yxfq0v6fj9ya7d9dc6x0xwfp6r2x0li0"; + url = "https://elpa.gnu.org/packages/debbugs-0.29.tar"; + sha256 = "1bn21d9dr9pb3vdak3v07x056xafym89kdpxavjf4avy6bry6s4d"; }; packageRequires = [ emacs soap-client ]; meta = { @@ -1022,6 +1022,21 @@ license = lib.licenses.free; }; }) {}; + easy-escape = callPackage ({ elpaBuild, fetchurl, lib }: + elpaBuild { + pname = "easy-escape"; + ename = "easy-escape"; + version = "0.2.1"; + src = fetchurl { + url = "https://elpa.gnu.org/packages/easy-escape-0.2.1.tar"; + sha256 = "19blpwka440y6r08hzzaz61gb24jr6a046pai2j1a3jg6x9fr3j5"; + }; + packageRequires = []; + meta = { + homepage = "https://elpa.gnu.org/packages/easy-escape.html"; + license = lib.licenses.free; + }; + }) {}; easy-kill = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "easy-kill"; @@ -1101,10 +1116,10 @@ elpaBuild { pname = "eev"; ename = "eev"; - version = "20210822"; + version = "20210925"; src = fetchurl { - url = "https://elpa.gnu.org/packages/eev-20210822.tar"; - sha256 = "1682hl8s15snz9vq2r0q7jfpf81gbhlyxp55l2alsmxll4qq72wh"; + url = "https://elpa.gnu.org/packages/eev-20210925.tar"; + sha256 = "0kwmjspmvz9lfm6y0kls9v2l55ccni0gviv9jlzxiwynrc01rz4y"; }; packageRequires = [ emacs ]; meta = { @@ -1224,10 +1239,10 @@ elpaBuild { pname = "emms"; ename = "emms"; - version = "7.6"; + version = "7.7"; src = fetchurl { - url = "https://elpa.gnu.org/packages/emms-7.6.tar"; - sha256 = "03cp6mr0kxy41dg4ri5ymbzpkw7bd8zg7hx0a2rb4axiss5qmx7i"; + url = "https://elpa.gnu.org/packages/emms-7.7.tar"; + sha256 = "0n9nx4wgjxkr8nsxcq8svg0x0qkqj7bsd2j0ihy4jzj29xmyxl0h"; }; packageRequires = [ cl-lib nadvice seq ]; meta = { @@ -1405,16 +1420,16 @@ license = lib.licenses.free; }; }) {}; - flymake = callPackage ({ eldoc, elpaBuild, emacs, fetchurl, lib }: + flymake = callPackage ({ eldoc, elpaBuild, emacs, fetchurl, lib, project }: elpaBuild { pname = "flymake"; ename = "flymake"; - version = "1.1.1"; + version = "1.2.1"; src = fetchurl { - url = "https://elpa.gnu.org/packages/flymake-1.1.1.tar"; - sha256 = "0lk2v34b59b24j3hsmi8d0v7fgpwcipv7ka9i88cdgjmjjmzgz5q"; + url = "https://elpa.gnu.org/packages/flymake-1.2.1.tar"; + sha256 = "1j4j1mxqvkpdccrm5khykmdpm8z9p0pxvnsw4cz9b76xzfdzy5pz"; }; - packageRequires = [ eldoc emacs ]; + packageRequires = [ eldoc emacs project ]; meta = { homepage = "https://elpa.gnu.org/packages/flymake.html"; license = lib.licenses.free; @@ -1828,10 +1843,10 @@ elpaBuild { pname = "ioccur"; ename = "ioccur"; - version = "2.4"; + version = "2.5"; src = fetchurl { - url = "https://elpa.gnu.org/packages/ioccur-2.4.el"; - sha256 = "1isid3kgsi5qkz27ipvmp9v5knx0qigmv7lz12mqdkwv8alns1p9"; + url = "https://elpa.gnu.org/packages/ioccur-2.5.tar"; + sha256 = "06a6djln2rry3qnb063yarji3p18hcpp5zrw7q43a45k7qaiaji8"; }; packageRequires = [ cl-lib emacs ]; meta = { @@ -1938,10 +1953,10 @@ elpaBuild { pname = "ivy-posframe"; ename = "ivy-posframe"; - version = "0.6.1"; + version = "0.6.2"; src = fetchurl { - url = "https://elpa.gnu.org/packages/ivy-posframe-0.6.1.tar"; - sha256 = "1nay2sfbwm2fkp3f1y89innd9h6j3q70q9y4yddrwa69cxlj9m23"; + url = "https://elpa.gnu.org/packages/ivy-posframe-0.6.2.tar"; + sha256 = "1x6pm0pry2j7yazhxvq1gydbymwll9yg85m8qi4sh8s0pnm0vjzk"; }; packageRequires = [ emacs ivy posframe ]; meta = { @@ -2208,10 +2223,10 @@ elpaBuild { pname = "map"; ename = "map"; - version = "3.1"; + version = "3.2.1"; src = fetchurl { - url = "https://elpa.gnu.org/packages/map-3.1.tar"; - sha256 = "1akkp34psm71ylbf1i02m56ga1dkswhz069j98amixrhw20hq4nx"; + url = "https://elpa.gnu.org/packages/map-3.2.1.tar"; + sha256 = "1vy231m2fm5cgz5nib14ib7ifprajhnbmzf6x4id48h2491m1n24"; }; packageRequires = [ emacs ]; meta = { @@ -2855,10 +2870,10 @@ elpaBuild { pname = "phps-mode"; ename = "phps-mode"; - version = "0.4.6"; + version = "0.4.7"; src = fetchurl { - url = "https://elpa.gnu.org/packages/phps-mode-0.4.6.tar"; - sha256 = "0mfwyz9rwnrs0xcd1jmq1ngdhbwygm6hbfhyr14djywxx0b4hpm5"; + url = "https://elpa.gnu.org/packages/phps-mode-0.4.7.tar"; + sha256 = "0y5milfjf45bi7gj7brl2lhyla8nsj3dc1a4nfq1wx3zw8arlc50"; }; packageRequires = [ emacs ]; meta = { @@ -2915,10 +2930,10 @@ elpaBuild { pname = "project"; ename = "project"; - version = "0.6.1"; + version = "0.7.1"; src = fetchurl { - url = "https://elpa.gnu.org/packages/project-0.6.1.tar"; - sha256 = "174fli3swbn67qcs9isv70vwrf6r41mak6dbs98gia89rlb71c8v"; + url = "https://elpa.gnu.org/packages/project-0.7.1.tar"; + sha256 = "1ip8s924n50mmh068p42zi0ylvv79a2pi9sji1c2pqj2q19d7jr6"; }; packageRequires = [ emacs xref ]; meta = { @@ -3411,10 +3426,10 @@ elpaBuild { pname = "seq"; ename = "seq"; - version = "2.22"; + version = "2.23"; src = fetchurl { - url = "https://elpa.gnu.org/packages/seq-2.22.tar"; - sha256 = "0zlqcbabzj8crg36ird2l74dbg5k7w1zf5iwva0h2dyvwyf9grma"; + url = "https://elpa.gnu.org/packages/seq-2.23.tar"; + sha256 = "1lbxnrzq88z8k9dyylg2636pg9vc8bzfprs1hxwp9ah0zkvsn52p"; }; packageRequires = []; meta = { @@ -3426,10 +3441,10 @@ elpaBuild { pname = "setup"; ename = "setup"; - version = "1.0.0"; + version = "1.0.1"; src = fetchurl { - url = "https://elpa.gnu.org/packages/setup-1.0.0.tar"; - sha256 = "05k65r5mgkpbj6f84qscgq4gjbj4wyn7c60b9xjvadw9b55yvfxk"; + url = "https://elpa.gnu.org/packages/setup-1.0.1.tar"; + sha256 = "1n390hiv5a8ij584r24cpbahj2sb12wjh0l3kzhccdxnxskrzgmh"; }; packageRequires = [ emacs ]; meta = { @@ -3576,10 +3591,10 @@ elpaBuild { pname = "so-long"; ename = "so-long"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://elpa.gnu.org/packages/so-long-1.1.1.tar"; - sha256 = "0qgdnkb702mkm886v0zv0hnm5y7zlifgx9ji6xmdsxycpsfkjz1f"; + url = "https://elpa.gnu.org/packages/so-long-1.1.2.tar"; + sha256 = "053msvy2pyispwg4zzpaczfkl6rvnwfklm4jdsbjhqm0kx4vlcs9"; }; packageRequires = [ emacs ]; meta = { @@ -3786,10 +3801,10 @@ elpaBuild { pname = "taxy"; ename = "taxy"; - version = "0.4"; + version = "0.8"; src = fetchurl { - url = "https://elpa.gnu.org/packages/taxy-0.4.tar"; - sha256 = "1iy1761v2q0i020x8ch4z3vljx2v62pcy5bifxq8gw5qx0115576"; + url = "https://elpa.gnu.org/packages/taxy-0.8.tar"; + sha256 = "00pc6lh35gj8vzcsn17fyazb9jsc4m6nr7cvb32w02isadv8qd3m"; }; packageRequires = [ emacs ]; meta = { @@ -4050,6 +4065,21 @@ license = lib.licenses.free; }; }) {}; + vc-got = callPackage ({ elpaBuild, emacs, fetchurl, lib }: + elpaBuild { + pname = "vc-got"; + ename = "vc-got"; + version = "1.0"; + src = fetchurl { + url = "https://elpa.gnu.org/packages/vc-got-1.0.tar"; + sha256 = "1lx52g261zr52gy63vjll8mvczcbdzbsx3wa47qdajrq9bwmj99j"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://elpa.gnu.org/packages/vc-got.html"; + license = lib.licenses.free; + }; + }) {}; vc-hgcmd = callPackage ({ elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "vc-hgcmd"; @@ -4116,10 +4146,10 @@ elpaBuild { pname = "verilog-mode"; ename = "verilog-mode"; - version = "2021.4.12.188864585"; + version = "2021.9.23.89128420"; src = fetchurl { - url = "https://elpa.gnu.org/packages/verilog-mode-2021.4.12.188864585.tar"; - sha256 = "0np2q0jhf1fbb1nl5nx1q9hw40yg62bhlddp2raqryxbkvsh0nbv"; + url = "https://elpa.gnu.org/packages/verilog-mode-2021.9.23.89128420.tar"; + sha256 = "1sgmkmif44npghz4nnag1w91qrrylq36175cjj87lcdp22s6isgk"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/emacs/elisp-packages/nongnu-generated.nix b/pkgs/applications/editors/emacs/elisp-packages/nongnu-generated.nix index 1804188cdbb..be3c69e1140 100644 --- a/pkgs/applications/editors/emacs/elisp-packages/nongnu-generated.nix +++ b/pkgs/applications/editors/emacs/elisp-packages/nongnu-generated.nix @@ -45,16 +45,16 @@ license = lib.licenses.free; }; }) {}; - caml = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib }: + caml = callPackage ({ elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "caml"; ename = "caml"; - version = "4.8"; + version = "4.9"; src = fetchurl { - url = "https://elpa.nongnu.org/nongnu/caml-4.8.tar"; - sha256 = "02wzjdd1ig8ajy65rf87zaysfddjbhyswifwlcs52ly7p84q72wk"; + url = "https://elpa.nongnu.org/nongnu/caml-4.9.tar"; + sha256 = "00ldvz6r10vwwmk6f3az534p0340ywn7knsg2bmvbvh3q51vyl9i"; }; - packageRequires = [ cl-lib emacs ]; + packageRequires = [ emacs ]; meta = { homepage = "https://elpa.gnu.org/packages/caml.html"; license = lib.licenses.free; @@ -841,10 +841,10 @@ elpaBuild { pname = "swift-mode"; ename = "swift-mode"; - version = "8.3.0"; + version = "8.4.0"; src = fetchurl { - url = "https://elpa.nongnu.org/nongnu/swift-mode-8.3.0.tar"; - sha256 = "1bsyv0dl7c2m3f690g7fij7g4937skxjin456vfrgbzb219pdkcs"; + url = "https://elpa.nongnu.org/nongnu/swift-mode-8.4.0.tar"; + sha256 = "1pfp1nvq2gny6kbiq3q0dcms0ysw43zq0aayfwqdj0llkf025dfp"; }; packageRequires = [ emacs seq ]; meta = { @@ -946,10 +946,10 @@ elpaBuild { pname = "yasnippet-snippets"; ename = "yasnippet-snippets"; - version = "0.2"; + version = "1.0"; src = fetchurl { - url = "https://elpa.nongnu.org/nongnu/yasnippet-snippets-0.2.tar"; - sha256 = "1xhlx2n2sdpcc82cba9r7nbd0gwi7m821p7vk0vnw84dhwy863ic"; + url = "https://elpa.nongnu.org/nongnu/yasnippet-snippets-1.0.tar"; + sha256 = "0p2a10wfh1dvmxbjlbj6p241xaldjim2h8vrv9aghvm3ryfixcpb"; }; packageRequires = [ yasnippet ]; meta = { diff --git a/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix b/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix index 3eae4bc52ce..1e47b281736 100644 --- a/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix +++ b/pkgs/applications/editors/emacs/elisp-packages/org-generated.nix @@ -4,10 +4,10 @@ elpaBuild { pname = "org"; ename = "org"; - version = "20210906"; + version = "20210920"; src = fetchurl { - url = "https://orgmode.org/elpa/org-20210906.tar"; - sha256 = "04aqniwix4w0iap38dsdskndknhw9k6apkmkrc79yfs3c4jcsszq"; + url = "https://orgmode.org/elpa/org-20210920.tar"; + sha256 = "01b44npf0rxq7c4ddygc3n3cv3h7afs41az0nfs67a5x7ag6c1jj"; }; packageRequires = []; meta = { @@ -19,10 +19,10 @@ elpaBuild { pname = "org-plus-contrib"; ename = "org-plus-contrib"; - version = "20210906"; + version = "20210920"; src = fetchurl { - url = "https://orgmode.org/elpa/org-plus-contrib-20210906.tar"; - sha256 = "1v0yy92x8shwp36qfyzmvk8ayz9amkdis967gqacq5jxcyq7mhbn"; + url = "https://orgmode.org/elpa/org-plus-contrib-20210920.tar"; + sha256 = "1m376fnm8hrm83hgx4b0y21lzdrbxjp83bv45plvrjky44qfdwfn"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json b/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json index 2b89f5466d5..56acbe90815 100644 --- a/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json +++ b/pkgs/applications/editors/emacs/elisp-packages/recipes-archive-melpa.json @@ -279,11 +279,11 @@ "repo": "afroisalreadyinu/abl-mode", "unstable": { "version": [ - 20210122, - 1508 + 20210923, + 950 ], - "commit": "fdd83e732b2c870f4ddc0f62b5b261e03bfb212a", - "sha256": "1ny3386n5h3s3lg9235vj17vwsx6n1y99kln6vgqy6kk37q0ig42" + "commit": "fc0eeb780d22aa1aac337f06cc9b479c51600243", + "sha256": "1vv3p6fkp352chrjm7jwc3frifzfral1jyrkx4m8pfq0cyj2g197" } }, { @@ -297,8 +297,8 @@ 20210519, 322 ], - "commit": "fb1fe91ab8ec75dcd52130c38f13759f19d20fe9", - "sha256": "05fqxsk0fk6llc5sgk4gqnpx4xy598nyl2kkjv6rhld2xjaps3q9" + "commit": "85d0512e239f2ec2217da7f316a5aed350041fd9", + "sha256": "0ca375q90fg29c0y47s7ljb5ymwf8wnq6b8v375r06rkqvi7svdx" }, "stable": { "version": [ @@ -1044,8 +1044,8 @@ "auto-complete", "yasnippet" ], - "commit": "e29075f810af73f6bf7803eebf15d96bffee7154", - "sha256": "08vfdp7q6x5fk2nn5dl884cyysxrl2gw8f16g7wqvf7v24jmx71d" + "commit": "933805013e026991d29a7abfb425075d104aa1cf", + "sha256": "0qzb6wlh2hf0kp9n74m2q6hrf4rar62dfxfh8yj1rjx2brpi1qdq" }, "stable": { "version": [ @@ -1070,8 +1070,8 @@ "repo": "xcwen/ac-php", "unstable": { "version": [ - 20210820, - 1000 + 20210909, + 918 ], "deps": [ "dash", @@ -1081,8 +1081,8 @@ "s", "xcscope" ], - "commit": "e29075f810af73f6bf7803eebf15d96bffee7154", - "sha256": "08vfdp7q6x5fk2nn5dl884cyysxrl2gw8f16g7wqvf7v24jmx71d" + "commit": "933805013e026991d29a7abfb425075d104aa1cf", + "sha256": "0qzb6wlh2hf0kp9n74m2q6hrf4rar62dfxfh8yj1rjx2brpi1qdq" }, "stable": { "version": [ @@ -1148,8 +1148,8 @@ "auto-complete", "rtags" ], - "commit": "3a057f127b931c683288f8731f05ba5e2aab4133", - "sha256": "1brf05grh0xdcjllaiixpjxmcg2j130gcrxkqm5v4ryb1w9fki7g" + "commit": "cdff9b47fc17710aad7815652490c3c620b5e792", + "sha256": "0mrb2dayd8ls56cjlp63315ai0ds09d4qsajgv5kks2gqqxbkrjb" }, "stable": { "version": [ @@ -1962,8 +1962,8 @@ "annotation", "eri" ], - "commit": "731f300deac14e10792a0bbf22c86cbe0c9c7e4b", - "sha256": "1fgqk0xvfxaqj737b62ngnqivd8fhp5pakwbh2zvvdl76frkbsmv" + "commit": "7f58030124fa99dfbf8db376659416f3ad8384de", + "sha256": "0hhc3n6z7p366rywn0zal5lakzpl6m71jxcy0ddd2f358hfzz8ac" }, "stable": { "version": [ @@ -2194,15 +2194,15 @@ "repo": "alan-platform/AlanForEmacs", "unstable": { "version": [ - 20210802, - 1950 + 20210916, + 1135 ], "deps": [ "flycheck", "s" ], - "commit": "9e66137860d05e9c8e1d70a087bfd9cb5ca5ec07", - "sha256": "1xnb2n77bj3ynrgrl13pwdjbbka9s6gwdskz99cjdky2m7z1xh0z" + "commit": "217ffe99e3acf7d545827605ec95434e392a9f5f", + "sha256": "09wd1k3hnf1hri8c9m27g8cnqka59szr2anfkkh35s52bynvpxf2" }, "stable": { "version": [ @@ -2338,14 +2338,14 @@ "repo": "cpitclaudel/alectryon", "unstable": { "version": [ - 20210817, - 49 + 20210925, + 414 ], "deps": [ "flycheck" ], - "commit": "59aac2167ca623358ddbb800abe5912194137f74", - "sha256": "17vn4hxkvd1nkn7gjjg867rjd5r0qsb7qlf2fh75pikk806x5sa8" + "commit": "955c616be9725c819fa6ef27cebe537c2e51bf56", + "sha256": "1qzqadliwlv33n6p5gma25yck1d83jjcpxriifbd8zg0rp3svwmm" }, "stable": { "version": [ @@ -2542,14 +2542,14 @@ "repo": "seagle0128/all-the-icons-ibuffer", "unstable": { "version": [ - 20210727, - 808 + 20210927, + 1407 ], "deps": [ "all-the-icons" ], - "commit": "165f1702f6f49f4fc2fb15534ede141102657aef", - "sha256": "0k985lg08dml5cpw9piqhwrh27bbxwqgsy4zcj4f40niaallk6fy" + "commit": "f689582a413ba5bb722067ea470829819e1f1131", + "sha256": "1r4v86jgp656cs1mxxsb30i1kwka29nzfri151bjrnbyy0z99qrg" }, "stable": { "version": [ @@ -2604,15 +2604,15 @@ "repo": "seagle0128/all-the-icons-ivy-rich", "unstable": { "version": [ - 20210823, - 1544 + 20210927, + 1411 ], "deps": [ "all-the-icons", "ivy-rich" ], - "commit": "09b887c01aeb33d715a1f8269f45c38594614d93", - "sha256": "0l6brqdqqgcijd2jfycy3i2n39bwcq7m12km8hg3kx4bv0zmn00g" + "commit": "8c0cd543c8d79cf223216b3f44ac3a4b0695c484", + "sha256": "0yhg39gg5w3gjhwfgz6v33ld0qyjj4v627ka9az97biz2xvvvrl1" }, "stable": { "version": [ @@ -2678,8 +2678,8 @@ 20200723, 1037 ], - "commit": "4aba676d49b0705cb4431b7e7c733ef8eac7d5aa", - "sha256": "1z5b5ivn81hmvndd7ari07kj1bsp9ziyxcrgf7xq21g1dfsbq8cs" + "commit": "fb8550cb690b0ec954968afc7e8e953fd6859cdb", + "sha256": "1flw5msh1sda3ymkkg8xcgixpa5jgm2i1ligna5h501xbybnk1iz" }, "stable": { "version": [ @@ -3204,11 +3204,11 @@ "repo": "bastibe/annotate.el", "unstable": { "version": [ - 20210819, - 1443 + 20210923, + 1338 ], - "commit": "4ae1d4f2a6b6d7e598285c6a43ae1785d44147e5", - "sha256": "0i1ldw5iz61p3sp8anihf3a16z56jqgznrwphgf0b1kl0sdsq6lq" + "commit": "c737b516b8058cbc0c6f2bf8f3431339be854217", + "sha256": "0v00n5gwkzg428rqrjbapx9vca4m7zaf33fz4qm7ah7plha6b0k2" }, "stable": { "version": [ @@ -3246,8 +3246,8 @@ 20200914, 644 ], - "commit": "731f300deac14e10792a0bbf22c86cbe0c9c7e4b", - "sha256": "1fgqk0xvfxaqj737b62ngnqivd8fhp5pakwbh2zvvdl76frkbsmv" + "commit": "7f58030124fa99dfbf8db376659416f3ad8384de", + "sha256": "0hhc3n6z7p366rywn0zal5lakzpl6m71jxcy0ddd2f358hfzz8ac" }, "stable": { "version": [ @@ -3567,11 +3567,11 @@ "repo": "dieter-wilhelm/apdl-mode", "unstable": { "version": [ - 20210828, - 1913 + 20210928, + 1628 ], - "commit": "f1d4bef95c3be736c15f0d9b41037ba02933acf1", - "sha256": "1a6s7zcz176845fp38n1ilpqkgzzpq3miwg7cpymrcdnp3kxvc0n" + "commit": 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"849683fa055afc982af4811f89998281ffe99315", - "sha256": "0zcjb8glb28q1vskyp4mwqpysx1nphyciw8jszfhxqgsbr7nq3fv" + "commit": "9610142c9edbeb312f3c510af9e3ccfa85fb0014", + "sha256": "036gk93hkllhwl76y284c8nk39r6m1yfsjaj8wbmhgmqz4yidyqi" } }, { @@ -112274,11 +112611,11 @@ "repo": "xahlee/lookup-word-on-internet", "unstable": { "version": [ - 20210902, - 519 + 20210925, + 1653 ], - "commit": "a8ef9b5597ab176015c185a9da435b2d5e5d5b71", - "sha256": "0hsy7y1vdc8warh4h0yanckm5b0jh6kpmwhyh035j7xvkg6lzf4w" + "commit": "d99cce539d82cb4f0e10b7c02b5500561b13ff09", + "sha256": "07mlhsxhb3l3xawlvzx76jy4z6q52znjapmpj47w8hllnaibmhmy" } }, { @@ -113220,11 +113557,11 @@ "repo": "JorisE/yapfify", "unstable": { "version": [ - 20200406, - 830 + 20210914, + 634 ], - "commit": "3df4e8ce65f55fd69479b3417525ce83a2b00b45", - "sha256": "13q84a4q5bv56r9dhi84jqbkx7dc1bvi42s01ahh8vmdvg4h39d3" + "commit": "c9347e3b1dec5fc8d34883e206fcdc8500d22368", + "sha256": "0gkz4f0yfpfchh78v1c0plbjafag23y18gcg8a8rc5s21nqqhkj4" }, "stable": { "version": [ @@ -113392,25 +113729,25 @@ "repo": "AndreaCrotti/yasnippet-snippets", "unstable": { "version": [ - 20210808, - 1851 + 20210910, + 1959 ], "deps": [ "yasnippet" ], - "commit": "8bf33e9e54de0dca1728221b0dda6789d99b7930", - "sha256": "1gz4q8knyss9bsz5s5vywi4qvazgwg8ryh7byxkrmbrxibvc9d18" + "commit": "f50b4c16ca2a73fd04ebd301f0bf2f5ab6107d88", + "sha256": "0iglhbwnx2pk2p05ym43fh3p4vwd77kch6f8aw63jz77ia05cba4" }, "stable": { "version": [ - 0, - 24 + 1, + 0 ], "deps": [ "yasnippet" ], - "commit": "be823d7e1a1a46454d60a9f3dabb16b68b5dd853", - "sha256": "0ak0drxlg3m2v4ya5chpgl82rcl7ic2nmnybhpw1qk51mcmv643y" + "commit": "c0ef1e8cfd05ef77b9240f3d9e8f0798bbcf9a58", + "sha256": "0m78jxhjyf4212ig2ncxr6bhhd6yx4c3nc8x4ylamzq21x4fl21r" } }, { @@ -114091,15 +114428,15 @@ "repo": "EFLS/zetteldeft", "unstable": { "version": [ - 20210819, - 1048 + 20210919, + 1306 ], "deps": [ "ace-window", "deft" ], - "commit": "910a6607e172ae20347d74e651d29ebedc58ea06", - "sha256": "1cccj3y7a353b2b8gvbbs2ami1g3a7961j3dwmcar9lc0yrh3hys" + "commit": "f4f227a9cdb69cf06fd3715e40ddf17a069063f1", + "sha256": "0baydmll48m0z2pk8gw5z5ki9b04mc7xjxw8ljaz58ph7ik1dpi0" }, "stable": { "version": [ @@ -114127,8 +114464,8 @@ "deps": [ "s" ], - "commit": "748e14b5a0dc2200d10b946d0111bd286e2c1c71", - "sha256": "1s9nhqbw5jxkqsvy40dd80l5wjw1407vk9qmdfiva8hj0ymcigr6" + "commit": "85f9fbc0fdef6310647d9457e9a242826f387877", + "sha256": "1vdgjwab872kh009lminrrwkghl3ylswn54qad4ahwhmkdz2p5ra" }, "stable": { "version": [ @@ -114605,11 +114942,11 @@ "repo": "abo-abo/zoutline", "unstable": { "version": [ - 20210901, - 1100 + 20210913, + 1117 ], - "commit": "3c0b5072a2f19a35d92dde6377ae7c1ac0d3bfe7", - "sha256": "0ickivsq8zn0b50mqfa94c63id3fki94wd1w9br84dbd6kjiy1s7" + "commit": "d678b0ea805dd18c18746455c70ea68e51422c1d", + "sha256": "134c9ibk920nnhmgnvkr97zwgxy7a41kqj14dkrzxmw9lhxnmz20" }, "stable": { "version": [ diff --git a/pkgs/applications/editors/leo-editor/default.nix b/pkgs/applications/editors/leo-editor/default.nix index e583671bcb4..cf4a752b1bd 100644 --- a/pkgs/applications/editors/leo-editor/default.nix +++ b/pkgs/applications/editors/leo-editor/default.nix @@ -63,5 +63,6 @@ mkDerivation rec { longDescription = "Leo is a PIM, IDE and outliner that accelerates the work flow of programmers, authors and web designers."; license = licenses.mit; maintainers = with maintainers; [ leonardoce ]; + mainProgram = "leo"; }; } diff --git a/pkgs/applications/editors/nano/nanorc/default.nix b/pkgs/applications/editors/nano/nanorc/default.nix index fcec55871aa..0675ceaba96 100644 --- a/pkgs/applications/editors/nano/nanorc/default.nix +++ b/pkgs/applications/editors/nano/nanorc/default.nix @@ -32,7 +32,6 @@ in stdenv.mkDerivation rec { git gnused nix - nixfmt ] } oldVersion="$(nix-instantiate --eval -E "with import ./. {}; lib.getVersion ${pname}" | tr -d '"' | sed 's|\\.|-|g')" @@ -42,7 +41,6 @@ in stdenv.mkDerivation rec { default_nix="$nixpkgs/pkgs/applications/editors/nano/nanorc/default.nix" newTag=$(echo $latestTag | sed 's|\.|-|g') update-source-version ${pname} "$newTag" --version-key=version --print-changes - nixfmt "$default_nix" else echo "${pname} is already up-to-date" fi diff --git a/pkgs/applications/editors/neovim/default.nix b/pkgs/applications/editors/neovim/default.nix index 9e5901cb941..8655235f292 100644 --- a/pkgs/applications/editors/neovim/default.nix +++ b/pkgs/applications/editors/neovim/default.nix @@ -32,13 +32,13 @@ let in stdenv.mkDerivation rec { pname = "neovim-unwrapped"; - version = "0.5.0"; + version = "0.5.1"; src = fetchFromGitHub { owner = "neovim"; repo = "neovim"; rev = "v${version}"; - sha256 = "0lgbf90sbachdag1zm9pmnlbn35964l3khs27qy4462qzpqyi9fi"; + sha256 = "0b2gda9h14lvwahrr7kq3ix8wsw99g4ngy1grmhv5544n93ypcyk"; }; patches = [ diff --git a/pkgs/applications/editors/vscode/generic.nix b/pkgs/applications/editors/vscode/generic.nix index 49836b94d81..7a3f34828ee 100644 --- a/pkgs/applications/editors/vscode/generic.nix +++ b/pkgs/applications/editors/vscode/generic.nix @@ -112,7 +112,8 @@ let ''; # See https://github.com/NixOS/nixpkgs/issues/49643#issuecomment-873853897 - postPatch = '' + # linux only because of https://github.com/NixOS/nixpkgs/issues/138729 + postPatch = lib.optionalString stdenv.isLinux '' # this is a fix for "save as root" functionality packed="resources/app/node_modules.asar" unpacked="resources/app/node_modules" diff --git a/pkgs/applications/gis/qgis/unwrapped.nix b/pkgs/applications/gis/qgis/unwrapped.nix index bdd8ace1e3d..70b5ffcc707 100644 --- a/pkgs/applications/gis/qgis/unwrapped.nix +++ b/pkgs/applications/gis/qgis/unwrapped.nix @@ -1,9 +1,42 @@ -{ mkDerivation, lib, fetchFromGitHub, cmake, ninja, flex, bison, proj, geos -, xlibsWrapper, sqlite, gsl, qwt, fcgi, python3Packages, libspatialindex -, libspatialite, postgresql, txt2tags, openssl, libzip, hdf5, netcdf, exiv2 -, protobuf, qtbase, qtsensors, qca-qt5, qtkeychain, qscintilla, qtserialport -, qtxmlpatterns, withGrass ? true, grass, withWebKit ? true, qtwebkit }: -with lib; +{ lib +, mkDerivation +, fetchFromGitHub +, fetchpatch +, cmake +, ninja +, flex +, bison +, proj +, geos +, xlibsWrapper +, sqlite +, gsl +, qwt +, fcgi +, python3Packages +, libspatialindex +, libspatialite +, postgresql +, txt2tags +, openssl +, libzip +, hdf5 +, netcdf +, exiv2 +, protobuf +, qtbase +, qtsensors +, qca-qt5 +, qtkeychain +, qscintilla +, qtserialport +, qtxmlpatterns +, withGrass ? true +, grass +, withWebKit ? true +, qtwebkit +}: + let pythonBuildInputs = with python3Packages; [ qscintilla-qt5 @@ -25,8 +58,7 @@ let ]; in mkDerivation rec { version = "3.16.10"; - pname = "qgis"; - name = "${pname}-unwrapped-${version}"; + pname = "qgis-unwrapped"; src = fetchFromGitHub { owner = "qgis"; @@ -35,6 +67,13 @@ in mkDerivation rec { sha256 = "sha256-/lsfyTDlkZNIVHg5qgZW7qfOyTC2+1r3ZbsnQmEdy30="; }; + patches = [ + (fetchpatch { + url = "https://github.com/qgis/QGIS/commit/fc1ac8bef8dcc3194857ecd32519aca4867b4fa1.patch"; + sha256 = "106smg3drx8c7yxzfhd1c7xrq757l5cfxx8lklihyvr4a7wc9gpy"; + }) + ]; + passthru = { inherit pythonBuildInputs; inherit python3Packages; diff --git a/pkgs/applications/graphics/feh/default.nix b/pkgs/applications/graphics/feh/default.nix index cd7b6e95d03..c279ccf3df6 100644 --- a/pkgs/applications/graphics/feh/default.nix +++ b/pkgs/applications/graphics/feh/default.nix @@ -7,11 +7,11 @@ with lib; stdenv.mkDerivation rec { pname = "feh"; - version = "3.7.1"; + version = "3.7.2"; src = fetchurl { url = "https://feh.finalrewind.org/${pname}-${version}.tar.bz2"; - sha256 = "sha256-V6scph9XyWWVh4Bp9VDTb1GFMPiPoxt0zDnNc5+SWLY="; + sha256 = "sha256-hHGP0nIM9UDSRXaElP4OtOWY9Es54jJrrow2ioKcglg="; }; outputs = [ "out" "man" "doc" ]; diff --git a/pkgs/applications/graphics/qimgv/default.nix b/pkgs/applications/graphics/qimgv/default.nix index 886a753ee2c..d3a46482be5 100644 --- a/pkgs/applications/graphics/qimgv/default.nix +++ b/pkgs/applications/graphics/qimgv/default.nix @@ -16,13 +16,13 @@ mkDerivation rec { pname = "qimgv"; - version = "0.9.1"; + version = "1.0.1"; src = fetchFromGitHub { owner = "easymodo"; repo = pname; rev = "v${version}"; - sha256 = "0b2hddps969gjim2r9a22zaxmnzp600av2zz6icq66ksfrx1rpac"; + sha256 = "1wybpmqvj7vj7cl6r4gif7mkrcdr6zpb939mmz46xsil5vb4pirh"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/kde/akregator.nix b/pkgs/applications/kde/akregator.nix index 5cacfe0c04f..9cb23ad35ac 100644 --- a/pkgs/applications/kde/akregator.nix +++ b/pkgs/applications/kde/akregator.nix @@ -12,6 +12,8 @@ mkDerivation { pname = "akregator"; meta = { + homepage = "https://apps.kde.org/akregator/"; + description = "KDE feed reader"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/ark/default.nix b/pkgs/applications/kde/ark/default.nix index ef27380a330..508f7e79f55 100644 --- a/pkgs/applications/kde/ark/default.nix +++ b/pkgs/applications/kde/ark/default.nix @@ -30,6 +30,7 @@ mkDerivation { qtWrapperArgs = [ "--prefix" "PATH" ":" (lib.makeBinPath extraTools) ]; meta = with lib; { + homepage = "https://apps.kde.org/ark/"; description = "Graphical file compression/decompression utility"; license = with licenses; [ gpl2 lgpl3 ] ++ optional unfreeEnableUnrar unfree; maintainers = [ maintainers.ttuegel ]; diff --git a/pkgs/applications/kde/dolphin.nix b/pkgs/applications/kde/dolphin.nix index 83f698b8977..92d256f4770 100644 --- a/pkgs/applications/kde/dolphin.nix +++ b/pkgs/applications/kde/dolphin.nix @@ -11,6 +11,8 @@ mkDerivation { pname = "dolphin"; meta = { + homepage = "https://apps.kde.org/dolphin/"; + description = "KDE file manager"; license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = [ lib.maintainers.ttuegel ]; broken = lib.versionOlder qtbase.version "5.14"; diff --git a/pkgs/applications/kde/dragon.nix b/pkgs/applications/kde/dragon.nix index 0483d535c9a..4fb5583a8ff 100644 --- a/pkgs/applications/kde/dragon.nix +++ b/pkgs/applications/kde/dragon.nix @@ -10,6 +10,7 @@ mkDerivation { pname = "dragon"; meta = { + homepage = "https://apps.kde.org/dragonplayer/"; license = with lib.licenses; [ gpl2 fdl12 ]; description = "A simple media player for KDE"; maintainers = [ lib.maintainers.jonathanreeve ]; diff --git a/pkgs/applications/kde/elisa.nix b/pkgs/applications/kde/elisa.nix index 6252e53078f..cdcca2cc9bb 100644 --- a/pkgs/applications/kde/elisa.nix +++ b/pkgs/applications/kde/elisa.nix @@ -40,6 +40,7 @@ mkDerivation rec { ]; meta = with lib; { + homepage = "https://apps.kde.org/elisa/"; description = "A simple media player for KDE"; license = licenses.gpl3; maintainers = with maintainers; [ peterhoeg ]; diff --git a/pkgs/applications/kde/filelight.nix b/pkgs/applications/kde/filelight.nix index 95a89b01b8c..64592ab9944 100644 --- a/pkgs/applications/kde/filelight.nix +++ b/pkgs/applications/kde/filelight.nix @@ -7,6 +7,8 @@ mkDerivation { pname = "filelight"; meta = { + description = "Disk usage statistics"; + homepage = "https://apps.kde.org/filelight/"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ fridh vcunat ]; broken = lib.versionOlder qtbase.version "5.13"; diff --git a/pkgs/applications/kde/gwenview.nix b/pkgs/applications/kde/gwenview.nix index 5fe126c04e6..27d676303f9 100644 --- a/pkgs/applications/kde/gwenview.nix +++ b/pkgs/applications/kde/gwenview.nix @@ -9,6 +9,8 @@ mkDerivation { pname = "gwenview"; meta = { + homepage = "https://apps.kde.org/gwenview/"; + description = "KDE image viewer"; license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = [ lib.maintainers.ttuegel ]; }; diff --git a/pkgs/applications/kde/k3b.nix b/pkgs/applications/kde/k3b.nix index eed3a4fac12..728260120a5 100644 --- a/pkgs/applications/kde/k3b.nix +++ b/pkgs/applications/kde/k3b.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "k3b"; meta = with lib; { + homepage = "https://apps.kde.org/k3b/"; + description = "Disk burning application"; license = with licenses; [ gpl2Plus ]; maintainers = with maintainers; [ sander phreedom ]; platforms = platforms.linux; diff --git a/pkgs/applications/kde/kaddressbook.nix b/pkgs/applications/kde/kaddressbook.nix index 2672d815fb0..7a2a319c655 100644 --- a/pkgs/applications/kde/kaddressbook.nix +++ b/pkgs/applications/kde/kaddressbook.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "kaddressbook"; meta = { + homepage = "https://apps.kde.org/kaddressbook/"; + description = "KDE contact manager"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/kalarm.nix b/pkgs/applications/kde/kalarm.nix index 8239cdf0864..869a0f6ac67 100644 --- a/pkgs/applications/kde/kalarm.nix +++ b/pkgs/applications/kde/kalarm.nix @@ -19,6 +19,8 @@ mkDerivation { pname = "kalarm"; meta = { + homepage = "https://apps.kde.org/kalarm/"; + description = "Personal alarm scheduler"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.rittelle ]; }; diff --git a/pkgs/applications/kde/kamoso.nix b/pkgs/applications/kde/kamoso.nix index 3e5eb53858f..9baa06275a7 100644 --- a/pkgs/applications/kde/kamoso.nix +++ b/pkgs/applications/kde/kamoso.nix @@ -37,5 +37,9 @@ mkDerivation { "--prefix GST_PLUGIN_PATH : ${lib.makeSearchPath "lib/gstreamer-1.0" gst}" ]; - meta.license = with lib.licenses; [ lgpl21Only gpl3Only ]; + meta = { + homepage = "https://apps.kde.org/kamoso/"; + description = "A simple and friendly program to use your camera"; + license = with lib.licenses; [ lgpl21Only gpl3Only ]; + }; } diff --git a/pkgs/applications/kde/kate.nix b/pkgs/applications/kde/kate.nix index 1cc16496d12..713d7dbe830 100644 --- a/pkgs/applications/kde/kate.nix +++ b/pkgs/applications/kde/kate.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "kate"; meta = { + homepage = "https://apps.kde.org/kate/"; + description = "Advanced text editor"; license = with lib.licenses; [ gpl3 lgpl3 lgpl2 ]; maintainers = [ lib.maintainers.ttuegel ]; }; diff --git a/pkgs/applications/kde/kbreakout.nix b/pkgs/applications/kde/kbreakout.nix index cf60ada3c00..b29c83914c6 100644 --- a/pkgs/applications/kde/kbreakout.nix +++ b/pkgs/applications/kde/kbreakout.nix @@ -11,7 +11,11 @@ mkDerivation { pname = "kbreakout"; - meta.license = with lib.licenses; [ lgpl21 gpl3 ]; + meta = { + homepage = "KBreakOut"; + description = "Breakout-like game"; + license = with lib.licenses; [ lgpl21 gpl3 ]; + }; outputs = [ "out" "dev" ]; nativeBuildInputs = [ cmake extra-cmake-modules diff --git a/pkgs/applications/kde/kcachegrind.nix b/pkgs/applications/kde/kcachegrind.nix index 5988885c471..61ff38f3168 100644 --- a/pkgs/applications/kde/kcachegrind.nix +++ b/pkgs/applications/kde/kcachegrind.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kcachegrind"; meta = { + homepage = "https://apps.kde.org/kcachegrind/"; + description = "Profiler frontend"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ orivej ]; }; diff --git a/pkgs/applications/kde/kcalc.nix b/pkgs/applications/kde/kcalc.nix index b24046df5f5..20ae678dc01 100644 --- a/pkgs/applications/kde/kcalc.nix +++ b/pkgs/applications/kde/kcalc.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kcalc"; meta = { + homepage = "https://apps.kde.org/kcalc/"; + description = "Scientific calculator"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.fridh ]; }; diff --git a/pkgs/applications/kde/kcharselect.nix b/pkgs/applications/kde/kcharselect.nix index d35ee5ee670..0bc76b42087 100644 --- a/pkgs/applications/kde/kcharselect.nix +++ b/pkgs/applications/kde/kcharselect.nix @@ -7,6 +7,7 @@ mkDerivation { pname = "kcharselect"; meta = { + homepage = "https://apps.kde.org/kcharselect/"; license = lib.licenses.gpl2Plus; maintainers = [ lib.maintainers.schmittlauch ]; description = "A tool to select special characters from all installed fonts and copy them into the clipboard"; diff --git a/pkgs/applications/kde/kcolorchooser.nix b/pkgs/applications/kde/kcolorchooser.nix index 87ab2271561..26601bb37e3 100644 --- a/pkgs/applications/kde/kcolorchooser.nix +++ b/pkgs/applications/kde/kcolorchooser.nix @@ -7,6 +7,8 @@ mkDerivation { pname = "kcolorchooser"; meta = { + homepage = "https://apps.kde.org/kcolorchooser/"; + description = "Color chooser"; license = with lib.licenses; [ mit ]; maintainers = [ lib.maintainers.ttuegel ]; }; diff --git a/pkgs/applications/kde/kdebugsettings.nix b/pkgs/applications/kde/kdebugsettings.nix index 7f24ec8e2fc..e73f6f13ce9 100644 --- a/pkgs/applications/kde/kdebugsettings.nix +++ b/pkgs/applications/kde/kdebugsettings.nix @@ -9,6 +9,8 @@ mkDerivation { pname = "kdebugsettings"; meta = { + homepage = "https://apps.kde.org/kdebugsettings/"; + description = "KDE debug settings"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.rittelle ]; broken = lib.versionOlder qtbase.version "5.13"; diff --git a/pkgs/applications/kde/kdenlive/default.nix b/pkgs/applications/kde/kdenlive/default.nix index 8ec2d2a81b0..885b1c1d8cc 100644 --- a/pkgs/applications/kde/kdenlive/default.nix +++ b/pkgs/applications/kde/kdenlive/default.nix @@ -101,6 +101,8 @@ mkDerivation { ''; meta = { + homepage = "https://apps.kde.org/kdenlive/"; + description = "Video editor"; license = with lib.licenses; [ gpl2Plus ]; maintainers = with lib.maintainers; [ turion ]; }; diff --git a/pkgs/applications/kde/kdialog.nix b/pkgs/applications/kde/kdialog.nix index 192bfda4c27..015c86bc7d1 100644 --- a/pkgs/applications/kde/kdialog.nix +++ b/pkgs/applications/kde/kdialog.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kdialog"; meta = { + homepage = "https://apps.kde.org/kdialog/"; + description = "Display dialog boxes from shell scripts"; license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = with lib.maintainers; [ peterhoeg ]; }; diff --git a/pkgs/applications/kde/kfind.nix b/pkgs/applications/kde/kfind.nix index fa0ef1c9220..2c96b17dea1 100644 --- a/pkgs/applications/kde/kfind.nix +++ b/pkgs/applications/kde/kfind.nix @@ -7,6 +7,8 @@ mkDerivation { pname = "kfind"; meta = { + homepage = "https://apps.kde.org/kfind/"; + description = "Find files/folders"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.iblech ]; }; diff --git a/pkgs/applications/kde/kgeography.nix b/pkgs/applications/kde/kgeography.nix index 7a5d5516b5e..b832ffcfa2c 100644 --- a/pkgs/applications/kde/kgeography.nix +++ b/pkgs/applications/kde/kgeography.nix @@ -7,6 +7,8 @@ mkDerivation { pname = "kgeography"; meta = { + homepage = "https://apps.kde.org/kgeography/"; + description = "Geography trainer"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.globin ]; }; diff --git a/pkgs/applications/kde/kget.nix b/pkgs/applications/kde/kget.nix index b03246eacd5..2f59e3aaf96 100644 --- a/pkgs/applications/kde/kget.nix +++ b/pkgs/applications/kde/kget.nix @@ -16,6 +16,8 @@ mkDerivation { ]; meta = with lib; { + homepage = "https://apps.kde.org/kget/"; + description = "Download manager"; license = with licenses; [ gpl2 ]; maintainers = with maintainers; [ peterhoeg ]; }; diff --git a/pkgs/applications/kde/kgpg.nix b/pkgs/applications/kde/kgpg.nix index 32ba95231cd..1590887575b 100644 --- a/pkgs/applications/kde/kgpg.nix +++ b/pkgs/applications/kde/kgpg.nix @@ -18,6 +18,8 @@ mkDerivation { wrapProgram "$out/bin/kgpg" --prefix PATH : "${lib.makeBinPath [ gnupg ]}" ''; meta = { + homepage = "https://apps.kde.org/kgpg/"; + description = "Encryption tool"; license = [ lib.licenses.gpl2 ]; maintainers = [ lib.maintainers.ttuegel ]; }; diff --git a/pkgs/applications/kde/khelpcenter.nix b/pkgs/applications/kde/khelpcenter.nix index 0270118fc55..6f331dcf77c 100644 --- a/pkgs/applications/kde/khelpcenter.nix +++ b/pkgs/applications/kde/khelpcenter.nix @@ -1,8 +1,7 @@ -{ - mkDerivation, - extra-cmake-modules, kdoctools, - grantlee, kcmutils, kconfig, kcoreaddons, kdbusaddons, ki18n, - kinit, khtml, kservice, xapian +{ lib, mkDerivation +, extra-cmake-modules, kdoctools +, grantlee, kcmutils, kconfig, kcoreaddons, kdbusaddons, ki18n +, kinit, khtml, kservice, xapian }: mkDerivation { @@ -12,4 +11,9 @@ mkDerivation { grantlee kcmutils kconfig kcoreaddons kdbusaddons khtml ki18n kinit kservice xapian ]; + meta = with lib; { + homepage = "https://apps.kde.org/help/"; + description = "Help center"; + license = licenses.gpl2Plus; + }; } diff --git a/pkgs/applications/kde/kig.nix b/pkgs/applications/kde/kig.nix index 1ca57d91c19..d04cc76fc22 100644 --- a/pkgs/applications/kde/kig.nix +++ b/pkgs/applications/kde/kig.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kig"; meta = { + homepage = "https://apps.kde.org/kig/"; + description = "Interactive geometry"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ raskin ]; }; @@ -16,4 +18,3 @@ mkDerivation { boost karchive kcrash kiconthemes kparts ktexteditor qtsvg qtxmlpatterns ]; } - diff --git a/pkgs/applications/kde/kleopatra.nix b/pkgs/applications/kde/kleopatra.nix index f1f8ae9b375..a640802fed3 100644 --- a/pkgs/applications/kde/kleopatra.nix +++ b/pkgs/applications/kde/kleopatra.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kleopatra"; meta = { + homepage = "https://apps.kde.org/kleopatra/"; + description = "Certificate manager and unified crypto GUI"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/kmahjongg.nix b/pkgs/applications/kde/kmahjongg.nix index 285cf8adff5..a0c277ec091 100644 --- a/pkgs/applications/kde/kmahjongg.nix +++ b/pkgs/applications/kde/kmahjongg.nix @@ -13,6 +13,8 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ kdeclarative libkmahjongg knewstuff libkdegames ]; meta = { + description = "Mahjongg solitaire"; + homepage = "https://apps.kde.org/kmahjongg/"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ ]; }; diff --git a/pkgs/applications/kde/kmail.nix b/pkgs/applications/kde/kmail.nix index 1a33eb2fe20..341d54a6388 100644 --- a/pkgs/applications/kde/kmail.nix +++ b/pkgs/applications/kde/kmail.nix @@ -53,6 +53,8 @@ mkDerivation { pname = "kmail"; meta = { + homepage = "https://apps.kde.org/kmail2/"; + description = "Mail client"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/kmix.nix b/pkgs/applications/kde/kmix.nix index a34f5a22d06..2f85454eb67 100644 --- a/pkgs/applications/kde/kmix.nix +++ b/pkgs/applications/kde/kmix.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "kmix"; meta = { + homepage = "https://apps.kde.org/kmix/"; + description = "Sound mixer"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = [ lib.maintainers.rongcuid ]; }; diff --git a/pkgs/applications/kde/kmplot.nix b/pkgs/applications/kde/kmplot.nix index 04ccb809c79..a6784982580 100644 --- a/pkgs/applications/kde/kmplot.nix +++ b/pkgs/applications/kde/kmplot.nix @@ -5,6 +5,8 @@ mkDerivation { pname = "kmplot"; meta = { + homepage = "https://apps.kde.org/kmplot/"; + description = "Mathematical function plotter"; license = with lib.licenses; [ gpl2Plus fdl12 ]; maintainers = [ lib.maintainers.orivej ]; }; diff --git a/pkgs/applications/kde/knotes.nix b/pkgs/applications/kde/knotes.nix index 1907a8fe910..a465b82041a 100644 --- a/pkgs/applications/kde/knotes.nix +++ b/pkgs/applications/kde/knotes.nix @@ -1,14 +1,13 @@ -{ - mkDerivation, - extra-cmake-modules, kdoctools, - kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, - kdbusaddons, kdnssd, kglobalaccel, kiconthemes, kitemmodels, - kitemviews, kcmutils, knewstuff, knotifications, knotifyconfig, - kparts, ktextwidgets, kwidgetsaddons, kwindowsystem, - grantlee, grantleetheme, qtx11extras, - akonadi, akonadi-notes, akonadi-search, kcalutils, - kontactinterface, libkdepim, kmime, pimcommon, kpimtextedit, - kcalendarcore +{ lib, mkDerivation +, extra-cmake-modules, kdoctools +, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash +, kdbusaddons, kdnssd, kglobalaccel, kiconthemes, kitemmodels +, kitemviews, kcmutils, knewstuff, knotifications, knotifyconfig +, kparts, ktextwidgets, kwidgetsaddons, kwindowsystem +, grantlee, grantleetheme, qtx11extras +, akonadi, akonadi-notes, akonadi-search, kcalutils +, kontactinterface, libkdepim, kmime, pimcommon, kpimtextedit +, kcalendarcore }: mkDerivation { @@ -25,4 +24,9 @@ mkDerivation { akonadi-search kcalendarcore ]; + meta = with lib; { + homepage = "https://apps.kde.org/knotes/"; + description = "Popup notes"; + license = licenses.gpl2Plus; + }; } diff --git a/pkgs/applications/kde/kolf.nix b/pkgs/applications/kde/kolf.nix index 2f1189855be..5bcb9fb1100 100644 --- a/pkgs/applications/kde/kolf.nix +++ b/pkgs/applications/kde/kolf.nix @@ -10,6 +10,8 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ libkdegames kio ktextwidgets ]; meta = { + homepage = "https://apps.kde.org/kolf/"; + description = "Miniature golf"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ peterhoeg ]; }; diff --git a/pkgs/applications/kde/kolourpaint.nix b/pkgs/applications/kde/kolourpaint.nix index cd703c49eee..b02c91e8641 100644 --- a/pkgs/applications/kde/kolourpaint.nix +++ b/pkgs/applications/kde/kolourpaint.nix @@ -17,6 +17,8 @@ mkDerivation { kguiaddons kio ktextwidgets kwidgetsaddons kxmlgui libkexiv2 ]; meta = { + homepage = "https://apps.kde.org/kolourpaint/"; + description = "Paint program"; maintainers = [ lib.maintainers.fridh ]; license = with lib.licenses; [ gpl2 ]; }; diff --git a/pkgs/applications/kde/kompare.nix b/pkgs/applications/kde/kompare.nix index d4d49c6a942..eace8660c2e 100644 --- a/pkgs/applications/kde/kompare.nix +++ b/pkgs/applications/kde/kompare.nix @@ -7,7 +7,11 @@ mkDerivation { pname = "kompare"; - meta = { license = with lib.licenses; [ gpl2 ]; }; + meta = { + homepage = "https://apps.kde.org/kompare/"; + description = "Diff/patch frontend"; + license = with lib.licenses; [ gpl2 ]; + }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ kiconthemes kparts ktexteditor kwidgetsaddons libkomparediff2 diff --git a/pkgs/applications/kde/konqueror.nix b/pkgs/applications/kde/konqueror.nix index 781368a108f..cf4002a8f67 100644 --- a/pkgs/applications/kde/konqueror.nix +++ b/pkgs/applications/kde/konqueror.nix @@ -22,6 +22,8 @@ mkDerivation { ''; meta = { + homepage = "https://apps.kde.org/konqueror/"; + description = "Web browser, file manager and viewer"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ ]; broken = lib.versionOlder qtbase.version "5.13"; diff --git a/pkgs/applications/kde/konquest.nix b/pkgs/applications/kde/konquest.nix index 5957df47956..7c4ac20f4a5 100644 --- a/pkgs/applications/kde/konquest.nix +++ b/pkgs/applications/kde/konquest.nix @@ -22,6 +22,8 @@ mkDerivation { qtquickcontrols ]; meta = { + homepage = "https://apps.kde.org/konquest/"; + description = "Galactic strategy game"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ lheckemann ]; }; diff --git a/pkgs/applications/kde/konsole.nix b/pkgs/applications/kde/konsole.nix index 18750d1f160..098001ef4c2 100644 --- a/pkgs/applications/kde/konsole.nix +++ b/pkgs/applications/kde/konsole.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "konsole"; meta = { + homepage = "https://apps.kde.org/konsole/"; + description = "KDE terminal emulator"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = with lib.maintainers; [ ttuegel turion ]; }; diff --git a/pkgs/applications/kde/kontact.nix b/pkgs/applications/kde/kontact.nix index 801c6845e40..dbdc5ba474b 100644 --- a/pkgs/applications/kde/kontact.nix +++ b/pkgs/applications/kde/kontact.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "kontact"; meta = { + homepage = "https://apps.kde.org/kontact/"; + description = "Personal information manager"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/korganizer.nix b/pkgs/applications/kde/korganizer.nix index 0f6689bb758..3eafd80cacf 100644 --- a/pkgs/applications/kde/korganizer.nix +++ b/pkgs/applications/kde/korganizer.nix @@ -13,6 +13,8 @@ mkDerivation { pname = "korganizer"; meta = { + homepage = "https://apps.kde.org/korganizer/"; + description = "Personal organizer"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/krdc.nix b/pkgs/applications/kde/krdc.nix index b0e79b0ff89..8049c6d11b4 100644 --- a/pkgs/applications/kde/krdc.nix +++ b/pkgs/applications/kde/krdc.nix @@ -18,6 +18,7 @@ mkDerivation { ''; meta = with lib; { homepage = "http://www.kde.org"; + description = "Remote desktop client"; license = with licenses; [ gpl2 lgpl21 fdl12 bsd3 ]; maintainers = with maintainers; [ peterhoeg ]; platforms = platforms.linux; diff --git a/pkgs/applications/kde/krfb.nix b/pkgs/applications/kde/krfb.nix index 905c72b3675..15835bc6107 100644 --- a/pkgs/applications/kde/krfb.nix +++ b/pkgs/applications/kde/krfb.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "krfb"; meta = { + homepage = "https://apps.kde.org/krfb/"; + description = "Desktop sharing (VNC)"; license = with lib.licenses; [ gpl2 fdl12 ]; maintainers = with lib.maintainers; [ jerith666 ]; }; diff --git a/pkgs/applications/kde/kruler.nix b/pkgs/applications/kde/kruler.nix index 460675e8cb1..918c0c55b62 100644 --- a/pkgs/applications/kde/kruler.nix +++ b/pkgs/applications/kde/kruler.nix @@ -7,6 +7,8 @@ mkDerivation { pname = "kruler"; meta = { + homepage = "https://apps.kde.org/kruler/"; + description = "Screen ruler"; license = with lib.licenses; [ gpl2 ]; maintainers = [ lib.maintainers.vandenoever ]; }; diff --git a/pkgs/applications/kde/kspaceduel.nix b/pkgs/applications/kde/kspaceduel.nix index 49ef76151ea..bf174546f2f 100644 --- a/pkgs/applications/kde/kspaceduel.nix +++ b/pkgs/applications/kde/kspaceduel.nix @@ -11,7 +11,11 @@ mkDerivation { pname = "kspaceduel"; - meta.license = with lib.licenses; [ lgpl21 gpl3 ]; + meta = { + homepage = "https://apps.kde.org/kspaceduel/"; + description = "Space arcade game"; + license = with lib.licenses; [ lgpl21 gpl3 ]; + }; outputs = [ "out" "dev" ]; nativeBuildInputs = [ cmake extra-cmake-modules diff --git a/pkgs/applications/kde/ksudoku.nix b/pkgs/applications/kde/ksudoku.nix index bf59c6e94c3..1cfb3884ff5 100644 --- a/pkgs/applications/kde/ksudoku.nix +++ b/pkgs/applications/kde/ksudoku.nix @@ -12,6 +12,8 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ libGLU kdeclarative libkdegames ]; meta = { + homepage = "https://apps.kde.org/ksudoku/"; + description = "Suduko game"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ ]; }; diff --git a/pkgs/applications/kde/ksystemlog.nix b/pkgs/applications/kde/ksystemlog.nix index 08f7ffb7e05..1b78c16b49d 100644 --- a/pkgs/applications/kde/ksystemlog.nix +++ b/pkgs/applications/kde/ksystemlog.nix @@ -11,6 +11,8 @@ mkDerivation { propagatedBuildInputs = [ karchive kconfig kio ]; meta = with lib; { + homepage = "https://apps.kde.org/ksystemlog/"; + description = "System log viewer"; license = with licenses; [ gpl2 ]; maintainers = with maintainers; [ peterhoeg ]; }; diff --git a/pkgs/applications/kde/ktouch.nix b/pkgs/applications/kde/ktouch.nix index 9d31d4ec62b..df727c43a16 100644 --- a/pkgs/applications/kde/ktouch.nix +++ b/pkgs/applications/kde/ktouch.nix @@ -7,22 +7,22 @@ , xorg }: +mkDerivation { + pname = "ktouch"; + meta = { + homepage = "https://apps.kde.org/ktouch/"; + license = lib.licenses.gpl2; + maintainers = [ lib.maintainers.schmittlauch ]; + description = "A touch typing tutor from the KDE software collection"; + }; + nativeBuildInputs = [ extra-cmake-modules kdoctools qtdeclarative ]; + buildInputs = [ + kconfig kconfigwidgets kcoreaddons kdeclarative ki18n + kitemviews kcmutils kio knewstuff ktexteditor kwidgetsaddons + kwindowsystem kxmlgui qtscript qtdeclarative kqtquickcharts + qtx11extras qtgraphicaleffects qtxmlpatterns qtquickcontrols2 + xorg.libxkbfile xorg.libxcb + ]; - mkDerivation { - pname = "ktouch"; - meta = { - license = lib.licenses.gpl2; - maintainers = [ lib.maintainers.schmittlauch ]; - description = "A touch typing tutor from the KDE software collection"; - }; - nativeBuildInputs = [ extra-cmake-modules kdoctools qtdeclarative ]; - buildInputs = [ - kconfig kconfigwidgets kcoreaddons kdeclarative ki18n - kitemviews kcmutils kio knewstuff ktexteditor kwidgetsaddons - kwindowsystem kxmlgui qtscript qtdeclarative kqtquickcharts - qtx11extras qtgraphicaleffects qtxmlpatterns qtquickcontrols2 - xorg.libxkbfile xorg.libxcb - ]; - - enableParallelBuilding = true; + enableParallelBuilding = true; } diff --git a/pkgs/applications/kde/kwalletmanager.nix b/pkgs/applications/kde/kwalletmanager.nix index 7f227f6d9e6..8d56adc4132 100644 --- a/pkgs/applications/kde/kwalletmanager.nix +++ b/pkgs/applications/kde/kwalletmanager.nix @@ -14,6 +14,9 @@ mkDerivation { pname = "kwalletmanager"; meta = { + homepage = "https://apps.kde.org/kwalletmanager5/"; + + description = "KDE wallet management tool"; license = with lib.licenses; [ gpl2 ]; maintainers = with lib.maintainers; [ fridh ]; }; diff --git a/pkgs/applications/kde/marble.nix b/pkgs/applications/kde/marble.nix index 525289bdc3b..7fe3aa529fa 100644 --- a/pkgs/applications/kde/marble.nix +++ b/pkgs/applications/kde/marble.nix @@ -7,7 +7,11 @@ mkDerivation { pname = "marble"; - meta.license = with lib.licenses; [ lgpl21 gpl3 ]; + meta = { + homepage = "https://apps.kde.org/marble/"; + description = "Virtual globe"; + license = with lib.licenses; [ lgpl21 gpl3 ]; + }; outputs = [ "out" "dev" ]; nativeBuildInputs = [ extra-cmake-modules kdoctools perl ]; propagatedBuildInputs = [ diff --git a/pkgs/applications/kde/minuet.nix b/pkgs/applications/kde/minuet.nix index cc7be0bf79a..50a6a6f282e 100644 --- a/pkgs/applications/kde/minuet.nix +++ b/pkgs/applications/kde/minuet.nix @@ -8,6 +8,8 @@ mkDerivation { pname = "minuet"; meta = with lib; { + homepage = "https://apps.kde.org/minuet/"; + description = "Music Education Software"; license = with licenses; [ lgpl21 gpl3 ]; maintainers = with maintainers; [ peterhoeg HaoZeke ]; broken = lib.versionOlder qtbase.version "5.14"; diff --git a/pkgs/applications/kde/okular.nix b/pkgs/applications/kde/okular.nix index 12537eba270..9962500d907 100644 --- a/pkgs/applications/kde/okular.nix +++ b/pkgs/applications/kde/okular.nix @@ -29,6 +29,7 @@ mkDerivation { meta = with lib; { homepage = "http://www.kde.org"; + description = "KDE document viewer"; license = with licenses; [ gpl2 lgpl21 fdl12 bsd3 ]; maintainers = with maintainers; [ ttuegel turion ]; platforms = lib.platforms.linux; diff --git a/pkgs/applications/kde/picmi.nix b/pkgs/applications/kde/picmi.nix index 25734e318ab..4358eb5ffac 100644 --- a/pkgs/applications/kde/picmi.nix +++ b/pkgs/applications/kde/picmi.nix @@ -6,6 +6,7 @@ mkDerivation { pname = "picmi"; meta = with lib; { + homepage = "https://apps.kde.org/picmi/"; description = "Nonogram game"; longDescription = ''The goal is to reveal the hidden pattern in the board by coloring or leaving blank the cells in a grid according to numbers given at the side of the grid. diff --git a/pkgs/applications/kde/pim-data-exporter.nix b/pkgs/applications/kde/pim-data-exporter.nix index 746bb2aec2a..f13e1f66795 100644 --- a/pkgs/applications/kde/pim-data-exporter.nix +++ b/pkgs/applications/kde/pim-data-exporter.nix @@ -10,6 +10,8 @@ mkDerivation { pname = "pim-data-exporter"; meta = { + homepage = "https://apps.kde.org/pimdataexporter/"; + description = "Saves and restores all data from PIM apps"; license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; maintainers = kdepimTeam; }; diff --git a/pkgs/applications/kde/spectacle.nix b/pkgs/applications/kde/spectacle.nix index 587877ad7a7..39e9f344c3e 100644 --- a/pkgs/applications/kde/spectacle.nix +++ b/pkgs/applications/kde/spectacle.nix @@ -20,6 +20,8 @@ mkDerivation { ''; propagatedUserEnvPkgs = [ kipi-plugins libkipi ]; meta = with lib; { + homepage = "https://apps.kde.org/spectacle/"; + description = "Screenshot capture utility"; maintainers = with maintainers; [ ttuegel ]; broken = versionOlder qtbase.version "5.15"; }; diff --git a/pkgs/applications/misc/chrysalis/default.nix b/pkgs/applications/misc/chrysalis/default.nix index 55560c50f13..3332a08f228 100644 --- a/pkgs/applications/misc/chrysalis/default.nix +++ b/pkgs/applications/misc/chrysalis/default.nix @@ -2,7 +2,7 @@ let pname = "chrysalis"; - version = "0.8.4"; + version = "0.8.5"; in appimageTools.wrapAppImage rec { name = "${pname}-${version}-binary"; @@ -10,7 +10,7 @@ in appimageTools.wrapAppImage rec { inherit name; src = fetchurl { url = "https://github.com/keyboardio/${pname}/releases/download/v${version}/${pname}-${version}.AppImage"; - sha256 = "b41f3e23dac855b1588cff141e3d317f96baff929a0543c79fccee0c6f095bc7"; + sha256 = "1vgymc99nci8rdq8hd7i98x77x45jnpcmhgb8v7fzsz3br6raxcm"; }; }; diff --git a/pkgs/applications/misc/dasel/default.nix b/pkgs/applications/misc/dasel/default.nix index ba2e8819517..a362481e974 100644 --- a/pkgs/applications/misc/dasel/default.nix +++ b/pkgs/applications/misc/dasel/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "dasel"; - version = "1.20.0"; + version = "1.21.0"; src = fetchFromGitHub { owner = "TomWright"; repo = pname; rev = "v${version}"; - sha256 = "sha256-SJWIjizPf0bRwanpnLpuqsWKjaCwc1wBV2sCPSqGiOs="; + sha256 = "sha256-XomB//VX4ovE2AWh6wQxuGoLSSIxoXnxy4Agbip6PYw="; }; - vendorSha256 = "sha256-u3KsMi63wOi1fCSLpGxATZNmbhoIAGeVpwcKh+nmi3k="; + vendorSha256 = "sha256-yP4iF3403WWgWAmBHiuOpDsIAUx4+KR8uKPfjy3qXt8="; ldflags = [ "-s" "-w" "-X github.com/tomwright/dasel/internal.Version=${version}" diff --git a/pkgs/applications/misc/firestarter/default.nix b/pkgs/applications/misc/firestarter/default.nix index b2ca9a0cab6..92c517835d8 100644 --- a/pkgs/applications/misc/firestarter/default.nix +++ b/pkgs/applications/misc/firestarter/default.nix @@ -2,6 +2,7 @@ , lib , fetchFromGitHub , fetchzip +, addOpenGLRunpath , cmake , glibc_multi , glibc @@ -9,7 +10,6 @@ , pkg-config , cudatoolkit , withCuda ? false -, linuxPackages }: let @@ -60,13 +60,23 @@ stdenv.mkDerivation rec { fetchSubmodules = true; }; - nativeBuildInputs = [ cmake git pkg-config ]; + nativeBuildInputs = [ + cmake + git + pkg-config + ] ++ lib.optionals withCuda [ + addOpenGLRunpath + ]; buildInputs = [ hwloc ] ++ (if withCuda then - [ glibc_multi cudatoolkit linuxPackages.nvidia_x11 ] + [ glibc_multi cudatoolkit ] else [ glibc.static ]); + NIX_LDFLAGS = lib.optionals withCuda [ + "-L${cudatoolkit}/lib/stubs" + ]; + cmakeFlags = [ "-DFIRESTARTER_BUILD_HWLOC=OFF" "-DCMAKE_C_COMPILER_WORKS=1" @@ -76,8 +86,14 @@ stdenv.mkDerivation rec { ]; installPhase = '' + runHook preInstall mkdir -p $out/bin cp src/FIRESTARTER${lib.optionalString withCuda "_CUDA"} $out/bin/ + runHook postInstall + ''; + + postFixup = lib.optionalString withCuda '' + addOpenGLRunpath $out/bin/FIRESTARTER_CUDA ''; meta = with lib; { diff --git a/pkgs/applications/misc/joshuto/default.nix b/pkgs/applications/misc/joshuto/default.nix index 89e5aea943a..5497d37ef0e 100644 --- a/pkgs/applications/misc/joshuto/default.nix +++ b/pkgs/applications/misc/joshuto/default.nix @@ -2,23 +2,19 @@ rustPlatform.buildRustPackage rec { pname = "joshuto"; - version = "0.9.0"; + version = "0.9.1"; src = fetchFromGitHub { owner = "kamiyaa"; repo = pname; rev = version; - sha256 = "08d6h7xwcgycw5bdzwwc6aaikcrw3yc7inkiydgml9q261kql7zl"; - # upstream includes an outdated Cargo.lock that stops cargo from compiling - postFetch = '' - mkdir -p $out - tar xf $downloadedFile --strip=1 -C $out - substituteInPlace $out/Cargo.lock \ - --replace 0.8.6 ${version} - ''; + sha256 = "sha256-+qKOvFoEF/gZL4ijL8lIRWE9ZWJM2eBlk29Lk46jAfQ="; }; - cargoSha256 = "1scrqm7fs8y7anfiigimj7y5rjxcc2qvrxiq8ai7k5cwfc4v1ghm"; + # upstream includes an outdated Cargo.lock that stops cargo from compiling + cargoPatches = [ ./fix-cargo-lock.patch ]; + + cargoSha256 = "sha256-JlekxU9pMkHNsIcH3+7b2I6MYUlxRqNX+0wwyVrQMAE="; buildInputs = lib.optional stdenv.isDarwin SystemConfiguration; diff --git a/pkgs/applications/misc/joshuto/fix-cargo-lock.patch b/pkgs/applications/misc/joshuto/fix-cargo-lock.patch new file mode 100644 index 00000000000..023c824add1 --- /dev/null +++ b/pkgs/applications/misc/joshuto/fix-cargo-lock.patch @@ -0,0 +1,11 @@ +--- a/Cargo.lock ++++ b/Cargo.lock +@@ -512,7 +512,7 @@ checksum = "b71991ff56294aa922b450139ee08b3bfc70982c6b2c7562771375cf73542dd4" + + [[package]] + name = "joshuto" +-version = "0.9.0" ++version = "0.9.1" + dependencies = [ + "alphanumeric-sort", + "chrono", diff --git a/pkgs/applications/misc/kile-wl/default.nix b/pkgs/applications/misc/kile-wl/default.nix index 03786a62997..f517bfe3f4c 100644 --- a/pkgs/applications/misc/kile-wl/default.nix +++ b/pkgs/applications/misc/kile-wl/default.nix @@ -2,20 +2,20 @@ rustPlatform.buildRustPackage rec { pname = "kile-wl"; - version = "unstable-2021-08-03"; + version = "unstable-2021-09-02"; src = fetchFromGitLab { owner = "snakedye"; repo = "kile"; - rev = "7f0b1578352d935084d3d56ef42487d2a8cfbfe8"; - sha256 = "sha256-Ir9LNQt7/7TjhCJ69HYx1tBXeq/i7F3ydmenvchZgDI="; + rev = "acd61f7e59cc34091c976b0cdc3067dd35b53cae"; + sha256 = "sha256-O5sdPw9tR3GFPmJmb/QDmdBc7yeSGui4k+yn4Xo016A="; }; passthru.updateScript = unstableGitUpdater { url = "https://gitlab.com/snakedye/kile.git"; }; - cargoSha256 = "sha256-195rPxX3BTxJ0xLgye14aWuBd5OuJ30wyUa4wrbQ3Xo="; + cargoSha256 = "sha256-2QCv5fk0AH4sv0QJ/16zniHfg3HZLoHB7dl6vSfkxpE="; nativeBuildInputs = [ scdoc ]; diff --git a/pkgs/applications/misc/menumaker/default.nix b/pkgs/applications/misc/menumaker/default.nix index 8d018a67d37..0fa9ad5e7f0 100644 --- a/pkgs/applications/misc/menumaker/default.nix +++ b/pkgs/applications/misc/menumaker/default.nix @@ -1,12 +1,12 @@ -{ lib, fetchurl, python2Packages }: +{ lib, fetchurl, python3Packages }: -python2Packages.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { pname = "menumaker"; - version = "0.99.12"; + version = "0.99.13"; src = fetchurl { url = "mirror://sourceforge/menumaker/${pname}-${version}.tar.gz"; - sha256 = "034v5204bsgkzzk6zfa5ia63q95gln47f7hwf96yvad5hrhmd8z3"; + sha256 = "sha256-JBXs5hnt1snbnB1hi7q7HBI7rNp0OoalLeIM0uJCdkE="; }; format = "other"; diff --git a/pkgs/applications/misc/mop/default.nix b/pkgs/applications/misc/mop/default.nix index 007965f868b..f31b79c9ddf 100644 --- a/pkgs/applications/misc/mop/default.nix +++ b/pkgs/applications/misc/mop/default.nix @@ -9,7 +9,7 @@ buildGoPackage rec { goDeps = ./deps.nix; preConfigure = '' - for i in $(find . -type f);do + for i in *.go **/*.go; do substituteInPlace $i --replace michaeldv/termbox-go nsf/termbox-go done substituteInPlace Makefile --replace mop/cmd mop/mop diff --git a/pkgs/applications/misc/osm2xmap/default.nix b/pkgs/applications/misc/osm2xmap/default.nix index 4f2af99ab14..f9f880050ed 100644 --- a/pkgs/applications/misc/osm2xmap/default.nix +++ b/pkgs/applications/misc/osm2xmap/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, libroxml, proj, libyamlcpp, boost } : +{ lib, stdenv, fetchFromGitHub, libroxml, proj_7, libyamlcpp, boost } : stdenv.mkDerivation rec { pname = "osm2xmap"; @@ -14,14 +14,14 @@ stdenv.mkDerivation rec { makeFlags = [ "GIT_VERSION=${version}" "GIT_TIMESTAMP=" - "SHAREDIR=${placeholder "out"}/share/osm2xmap" + "SHAREDIR=${placeholder "out"}/share/osm2xmap/" "INSTALL_BINDIR=${placeholder "out"}/bin" "INSTALL_MANDIR=${placeholder "out"}/share/man/man1" ]; NIX_CFLAGS_COMPILE = "-DACCEPT_USE_OF_DEPRECATED_PROJ_API_H"; - buildInputs = [ libroxml proj libyamlcpp boost ]; + buildInputs = [ libroxml proj_7 libyamlcpp boost ]; meta = with lib; { homepage = "https://github.com/sembruk/osm2xmap"; diff --git a/pkgs/applications/misc/psi-notify/default.nix b/pkgs/applications/misc/psi-notify/default.nix index 5a4b6f385df..9e4dcd783b7 100644 --- a/pkgs/applications/misc/psi-notify/default.nix +++ b/pkgs/applications/misc/psi-notify/default.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { install -D psi-notify $out/bin/psi-notify substituteInPlace psi-notify.service --replace psi-notify $out/bin/psi-notify - install -D psi-notify.service $out/share/systemd/user/psi-notify.service + install -D psi-notify.service $out/lib/systemd/user/psi-notify.service runHook postInstall ''; diff --git a/pkgs/applications/misc/survex/default.nix b/pkgs/applications/misc/survex/default.nix index f6865f877d7..27723096588 100644 --- a/pkgs/applications/misc/survex/default.nix +++ b/pkgs/applications/misc/survex/default.nix @@ -6,7 +6,7 @@ , wxGTK30-gtk3 , wxmac , ffmpeg -, proj +, proj_7 , perl532 , unscii , python @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ docbook5 docbook2x autoreconfHook pkg-config perlenv python ]; buildInputs = [ - libGL libGLU ffmpeg proj + libGL libGLU ffmpeg proj_7 ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ wxmac Carbon Cocoa ] ++ lib.optionals stdenv.hostPlatform.isLinux [ diff --git a/pkgs/applications/misc/xygrib/default.nix b/pkgs/applications/misc/xygrib/default.nix index 864ea27ede7..580faa36026 100644 --- a/pkgs/applications/misc/xygrib/default.nix +++ b/pkgs/applications/misc/xygrib/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, wrapQtAppsHook, cmake, bzip2, qtbase, qttools, libnova, proj, libpng, openjpeg }: +{ lib, stdenv, fetchFromGitHub, wrapQtAppsHook, cmake, bzip2, qtbase, qttools, libnova, proj_7, libpng, openjpeg }: stdenv.mkDerivation rec { version = "1.2.6.1"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ cmake qttools wrapQtAppsHook ]; - buildInputs = [ bzip2 qtbase libnova proj openjpeg libpng ]; + buildInputs = [ bzip2 qtbase libnova proj_7 openjpeg libpng ]; cmakeFlags = [ "-DOPENJPEG_INCLUDE_DIR=${openjpeg.dev}/include/openjpeg-${lib.versions.majorMinor openjpeg.version}" ] ++ lib.optionals stdenv.isDarwin [ "-DLIBNOVA_LIBRARY=${libnova}/lib/libnova.dylib" ]; diff --git a/pkgs/applications/misc/zola/default.nix b/pkgs/applications/misc/zola/default.nix index 52e3b9d847d..ab6bcc74726 100644 --- a/pkgs/applications/misc/zola/default.nix +++ b/pkgs/applications/misc/zola/default.nix @@ -1,4 +1,15 @@ -{ lib, stdenv, fetchFromGitHub, rustPlatform, cmake, pkg-config, openssl, oniguruma, CoreServices, installShellFiles }: +{ lib +, stdenv +, fetchFromGitHub +, rustPlatform +, cmake +, pkg-config +, openssl +, oniguruma +, CoreServices +, installShellFiles +, libsass +}: rustPlatform.buildRustPackage rec { pname = "zola"; @@ -13,9 +24,18 @@ rustPlatform.buildRustPackage rec { cargoSha256 = "1hg8j9a8c6c3ap24jd96y07rlp4f0s2mkyx5034nlnkm3lj4q42n"; - nativeBuildInputs = [ cmake pkg-config installShellFiles]; - buildInputs = [ openssl oniguruma ] - ++ lib.optional stdenv.isDarwin CoreServices; + nativeBuildInputs = [ + cmake + pkg-config + installShellFiles + ]; + buildInputs = [ + openssl + oniguruma + ] ++ lib.optional stdenv.isDarwin [ + CoreServices + libsass + ]; RUSTONIG_SYSTEM_LIBONIG = true; diff --git a/pkgs/applications/networking/browsers/brave/default.nix b/pkgs/applications/networking/browsers/brave/default.nix index c509941b8f1..df185c4c760 100644 --- a/pkgs/applications/networking/browsers/brave/default.nix +++ b/pkgs/applications/networking/browsers/brave/default.nix @@ -92,11 +92,11 @@ in stdenv.mkDerivation rec { pname = "brave"; - version = "1.29.77"; + version = "1.30.86"; src = fetchurl { url = "https://github.com/brave/brave-browser/releases/download/v${version}/brave-browser_${version}_amd64.deb"; - sha256 = "LJykdig44ACpvlaGogbwrbY9hCJT3CB4ZKDZ/IzaBOU="; + sha256 = "0pg29i01dm5gqfd3aagsc83dbx0n3051wfxi0r1c9l93dwm5bmq9"; }; dontConfigure = true; @@ -126,7 +126,7 @@ stdenv.mkDerivation rec { ln -sf $BINARYWRAPPER $out/bin/brave - for exe in $out/opt/brave.com/brave/{brave,crashpad_handler}; do + for exe in $out/opt/brave.com/brave/{brave,chrome_crashpad_handler}; do patchelf \ --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ --set-rpath "${rpath}" $exe diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.json b/pkgs/applications/networking/browsers/chromium/upstream-info.json index d7f29c4fefa..c789e04957a 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.json +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.json @@ -44,9 +44,9 @@ } }, "ungoogled-chromium": { - "version": "94.0.4606.54", - "sha256": "0p8kfnyhykbv1cylsx4hj2qdzqr2xdql9rhpva8bfla2w9hr8g83", - "sha256bin64": "0lq34l00zrr92g882xzqwq1lf2vf12x1mwidrr2qh6fz7v5418d3", + "version": "94.0.4606.61", + "sha256": "1gxrxmd2almwf067zycilyxkmc0d62h99ln8wp3n3i02bi9xnik4", + "sha256bin64": "116xrf8hcprbdpdx6a4xysac2phyvw88vs3n1bs24ly6pxydsasz", "deps": { "gn": { "version": "2021-08-11", @@ -55,8 +55,8 @@ "sha256": "031znmkbm504iim5jvg3gmazj4qnkfc7zg8aymjsij18fhf7piz0" }, "ungoogled-patches": { - "rev": "94.0.4606.54-1", - "sha256": "0phy87fiqdgikgl60yap7n1mvyvsidgznqp06j86287iihml3z2m" + "rev": "94.0.4606.61-1", + "sha256": "1sb6n3dnp8d1bzhyl9d8yc0x9imyccnwxf1fqzv7vs3fd6dgcprp" } } } diff --git a/pkgs/applications/networking/browsers/firefox-bin/default.nix b/pkgs/applications/networking/browsers/firefox-bin/default.nix index 54763b80181..c8f28b551cd 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/default.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/default.nix @@ -196,11 +196,9 @@ stdenv.mkDerivation { meta = with lib; { description = "Mozilla Firefox, free web browser (binary package)"; homepage = "http://www.mozilla.org/firefox/"; - license = { - free = false; - url = "http://www.mozilla.org/en-US/foundation/trademarks/policy/"; - }; + license = licenses.mpl20; platforms = builtins.attrNames mozillaPlatforms; + hydraPlatforms = []; maintainers = with maintainers; [ taku0 lovesegfault ]; }; } diff --git a/pkgs/applications/networking/cluster/kube3d/default.nix b/pkgs/applications/networking/cluster/kube3d/default.nix index 3652405194f..e37ba9e73fb 100644 --- a/pkgs/applications/networking/cluster/kube3d/default.nix +++ b/pkgs/applications/networking/cluster/kube3d/default.nix @@ -1,14 +1,14 @@ -{ lib, buildGoModule, fetchFromGitHub, installShellFiles, k3sVersion ? "1.20.6-k3s1" }: +{ lib, buildGoModule, fetchFromGitHub, installShellFiles, k3sVersion ? "1.21.3-k3s1" }: buildGoModule rec { pname = "kube3d"; - version = "4.4.7"; + version = "4.4.8"; src = fetchFromGitHub { owner = "rancher"; repo = "k3d"; rev = "v${version}"; - sha256 = "sha256-S1vHmXUCP1ayPo3vvHAbNCqNm1ueJ0jE4NUBvg5P3MU="; + sha256 = "sha256-PdbAkiua9AdcNDCpu4UILsmAz0nb4nLjahYomGSHqnc="; }; vendorSha256 = null; @@ -17,10 +17,9 @@ buildGoModule rec { excludedPackages = "\\(tools\\|docgen\\)"; - ldflags = let t = "github.com/rancher/k3d/v4/version"; in - [ - "-s" "-w" "-X ${t}.Version=v${version}" "-X ${t}.K3sVersion=v${k3sVersion}" - ]; + ldflags = + let t = "github.com/rancher/k3d/v4/version"; in + [ "-s" "-w" "-X ${t}.Version=v${version}" "-X ${t}.K3sVersion=v${k3sVersion}" ]; doCheck = false; diff --git a/pkgs/applications/networking/cluster/nomad/1.0.nix b/pkgs/applications/networking/cluster/nomad/1.0.nix index 62034a39bbc..092a620b98f 100644 --- a/pkgs/applications/networking/cluster/nomad/1.0.nix +++ b/pkgs/applications/networking/cluster/nomad/1.0.nix @@ -6,6 +6,6 @@ callPackage ./generic.nix { inherit buildGoPackage nvidia_x11 nvidiaGpuSupport; - version = "1.0.10"; - sha256 = "1yd4j35dmxzg9qapqyq3g3hnhxi5c4f57q43xbim8255bjyn94f0"; + version = "1.0.11"; + sha256 = "15h7w020p576zl91s5mr4npcmngrqqfj9xzlx6bk9i1cp6h4w0jy"; } diff --git a/pkgs/applications/networking/cluster/nomad/1.1.nix b/pkgs/applications/networking/cluster/nomad/1.1.nix index 3d34331b57d..6363852068e 100644 --- a/pkgs/applications/networking/cluster/nomad/1.1.nix +++ b/pkgs/applications/networking/cluster/nomad/1.1.nix @@ -6,7 +6,7 @@ callPackage ./genericModule.nix { inherit buildGoModule nvidia_x11 nvidiaGpuSupport; - version = "1.1.4"; - sha256 = "182f3sxw751s8qg16vbssplhl92i9gshgzvflwwvnxraz2795y7l"; - vendorSha256 = "1nddknnsvb05sapbj1c52cv2fmibvdg48f88malxqblzw33wfziq"; + version = "1.1.5"; + sha256 = "03gxh12bd5mj1l4q3xilil806dsqaqmz93ff7ysf441frgkx3iy3"; + vendorSha256 = "0rfd22rf76mwj489zhswah4g3dhhz6davm336xgm9dbnyaz9d8r0"; } diff --git a/pkgs/applications/networking/cluster/terragrunt/default.nix b/pkgs/applications/networking/cluster/terragrunt/default.nix index b238e5a4b71..1c52f56437c 100644 --- a/pkgs/applications/networking/cluster/terragrunt/default.nix +++ b/pkgs/applications/networking/cluster/terragrunt/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "terragrunt"; - version = "0.32.2"; + version = "0.33.0"; src = fetchFromGitHub { owner = "gruntwork-io"; repo = pname; rev = "v${version}"; - sha256 = "sha256-1s6/Xn/NsClG7YvRyzpvzMy8HmDITNCQUJxHaA84470="; + sha256 = "sha256-FvgB0jG6PEvhrT9Au/Uv9XSgKx+zNw8zETpg2dJ6QX4="; }; vendorSha256 = "sha256-y84EFmoJS4SeA5YFIVFU0iWa5NnjU5yvOj7OFE+jGN0="; diff --git a/pkgs/applications/networking/instant-messengers/chatterino2/default.nix b/pkgs/applications/networking/instant-messengers/chatterino2/default.nix index 075fd5b3a20..99e3a90b60b 100644 --- a/pkgs/applications/networking/instant-messengers/chatterino2/default.nix +++ b/pkgs/applications/networking/instant-messengers/chatterino2/default.nix @@ -2,12 +2,12 @@ mkDerivation rec { pname = "chatterino2"; - version = "2.3.0"; + version = "2.3.4"; src = fetchFromGitHub { owner = "Chatterino"; repo = pname; rev = "v${version}"; - sha256 = "0x12zcrbkxn2nn0hqkj1amrxv4q032id282cajzsx7by970r1shd"; + sha256 = "sha256-ZmUM56+YNH98J3XE/mWOOIfb0qBld2n4iuHpImbrU4o="; fetchSubmodules = true; }; nativeBuildInputs = [ qmake pkg-config wrapQtAppsHook ]; diff --git a/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json b/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json index 65093878da2..f1bce0b8fc0 100644 --- a/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json +++ b/pkgs/applications/networking/instant-messengers/element/element-desktop-package.json @@ -2,7 +2,7 @@ "name": "element-desktop", "productName": "Element", "main": "lib/electron-main.js", - "version": "1.8.5", + "version": "1.9.0", "description": "A feature-rich client for Matrix.org", "author": "Element", "repository": { @@ -57,7 +57,7 @@ "allchange": "^1.0.2", "asar": "^2.0.1", "chokidar": "^3.5.2", - "electron": "^13.1.9", + "electron": "13", "electron-builder": "22.11.4", "electron-builder-squirrel-windows": "22.11.4", "electron-devtools-installer": "^3.1.1", @@ -83,7 +83,7 @@ }, "build": { "appId": "im.riot.app", - "electronVersion": "13.2.2", + "electronVersion": "13.4.0", "files": [ "package.json", { diff --git a/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix b/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix index 45f2a5638ed..3aeaf58dbc2 100644 --- a/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix +++ b/pkgs/applications/networking/instant-messengers/element/element-desktop-yarndeps.nix @@ -42,43 +42,43 @@ }; } { - name = "_babel_generator___generator_7.15.0.tgz"; + name = "_babel_generator___generator_7.15.4.tgz"; path = fetchurl { - name = "_babel_generator___generator_7.15.0.tgz"; - url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.15.0.tgz"; - sha1 = "a7d0c172e0d814974bad5aa77ace543b97917f15"; + name = "_babel_generator___generator_7.15.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/generator/-/generator-7.15.4.tgz"; + sha1 = "85acb159a267ca6324f9793986991ee2022a05b0"; }; } { - name = "_babel_helper_function_name___helper_function_name_7.14.5.tgz"; + name = "_babel_helper_function_name___helper_function_name_7.15.4.tgz"; path = fetchurl { - name = "_babel_helper_function_name___helper_function_name_7.14.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-function-name/-/helper-function-name-7.14.5.tgz"; - sha1 = "89e2c474972f15d8e233b52ee8c480e2cfcd50c4"; + name = "_babel_helper_function_name___helper_function_name_7.15.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-function-name/-/helper-function-name-7.15.4.tgz"; + sha1 = "845744dafc4381a4a5fb6afa6c3d36f98a787ebc"; }; } { - name = "_babel_helper_get_function_arity___helper_get_function_arity_7.14.5.tgz"; + name = "_babel_helper_get_function_arity___helper_get_function_arity_7.15.4.tgz"; path = fetchurl { - name = "_babel_helper_get_function_arity___helper_get_function_arity_7.14.5.tgz"; - url = "https://registry.yarnpkg.com/@babel/helper-get-function-arity/-/helper-get-function-arity-7.14.5.tgz"; - sha1 = "25fbfa579b0937eee1f3b805ece4ce398c431815"; + name = "_babel_helper_get_function_arity___helper_get_function_arity_7.15.4.tgz"; + url = "https://registry.yarnpkg.com/@babel/helper-get-function-arity/-/helper-get-function-arity-7.15.4.tgz"; + sha1 = "098818934a137fce78b536a3e015864be1e2879b"; }; } { - name = "_babel_helper_hoist_variables___helper_hoist_variables_7.14.5.tgz"; + name = "_babel_helper_hoist_variables___helper_hoist_variables_7.15.4.tgz"; path = fetchurl { - name = "_babel_helper_hoist_variables___helper_hoist_variables_7.14.5.tgz"; 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+ }; + } + { name = "_npmcli_git___git_2.1.0.tgz"; path = fetchurl { name = "_npmcli_git___git_2.1.0.tgz"; @@ -530,27 +546,27 @@ }; } { - name = "_octokit_graphql___graphql_4.6.4.tgz"; + name = "_octokit_graphql___graphql_4.8.0.tgz"; path = fetchurl { - name = "_octokit_graphql___graphql_4.6.4.tgz"; - url = "https://registry.yarnpkg.com/@octokit/graphql/-/graphql-4.6.4.tgz"; - sha1 = "0c3f5bed440822182e972317122acb65d311a5ed"; + name = "_octokit_graphql___graphql_4.8.0.tgz"; + url = "https://registry.yarnpkg.com/@octokit/graphql/-/graphql-4.8.0.tgz"; + sha1 = "664d9b11c0e12112cbf78e10f49a05959aa22cc3"; }; } { - name = "_octokit_openapi_types___openapi_types_9.7.0.tgz"; + name = "_octokit_openapi_types___openapi_types_10.2.2.tgz"; path = fetchurl { - name = "_octokit_openapi_types___openapi_types_9.7.0.tgz"; - url = "https://registry.yarnpkg.com/@octokit/openapi-types/-/openapi-types-9.7.0.tgz"; - sha1 = "9897cdefd629cd88af67b8dbe2e5fb19c63426b2"; + name = "_octokit_openapi_types___openapi_types_10.2.2.tgz"; 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- url = "https://registry.yarnpkg.com/@typescript-eslint/types/-/types-4.29.3.tgz"; - sha1 = "d7980c49aef643d0af8954c9f14f656b7fd16017"; + name = "_typescript_eslint_types___types_4.31.1.tgz"; + url = "https://registry.yarnpkg.com/@typescript-eslint/types/-/types-4.31.1.tgz"; + sha1 = "5f255b695627a13401d2fdba5f7138bc79450d66"; }; } { - name = "_typescript_eslint_typescript_estree___typescript_estree_4.29.3.tgz"; + name = "_typescript_eslint_typescript_estree___typescript_estree_4.31.1.tgz"; path = fetchurl { - name = "_typescript_eslint_typescript_estree___typescript_estree_4.29.3.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/typescript-estree/-/typescript-estree-4.29.3.tgz"; - sha1 = "1bafad610015c4ded35c85a70b6222faad598b40"; + name = "_typescript_eslint_typescript_estree___typescript_estree_4.31.1.tgz"; + url = "https://registry.yarnpkg.com/@typescript-eslint/typescript-estree/-/typescript-estree-4.31.1.tgz"; + sha1 = "4a04d5232cf1031232b7124a9c0310b577a62d17"; }; } { - name = "_typescript_eslint_visitor_keys___visitor_keys_4.29.3.tgz"; + name = "_typescript_eslint_visitor_keys___visitor_keys_4.31.1.tgz"; path = fetchurl { - name = "_typescript_eslint_visitor_keys___visitor_keys_4.29.3.tgz"; - url = "https://registry.yarnpkg.com/@typescript-eslint/visitor-keys/-/visitor-keys-4.29.3.tgz"; - sha1 = "c691760a00bd86bf8320d2a90a93d86d322f1abf"; + name = "_typescript_eslint_visitor_keys___visitor_keys_4.31.1.tgz"; + url = "https://registry.yarnpkg.com/@typescript-eslint/visitor-keys/-/visitor-keys-4.31.1.tgz"; + sha1 = "f2e7a14c7f20c4ae07d7fc3c5878c4441a1da9cc"; }; } { @@ -866,19 +882,19 @@ }; } { - name = "ajv___ajv_8.6.2.tgz"; + name = "ajv___ajv_8.6.3.tgz"; path = fetchurl { - name = "ajv___ajv_8.6.2.tgz"; - url = "https://registry.yarnpkg.com/ajv/-/ajv-8.6.2.tgz"; - sha1 = "2fb45e0e5fcbc0813326c1c3da535d1881bb0571"; + name = "ajv___ajv_8.6.3.tgz"; + url = "https://registry.yarnpkg.com/ajv/-/ajv-8.6.3.tgz"; + sha1 = "11a66527761dc3e9a3845ea775d2d3c0414e8764"; }; } { - name = "allchange___allchange_1.0.2.tgz"; + name = "allchange___allchange_1.0.3.tgz"; path = fetchurl { - name = "allchange___allchange_1.0.2.tgz"; - url = "https://registry.yarnpkg.com/allchange/-/allchange-1.0.2.tgz"; - sha1 = "86b9190e12b7ede4f230ae763cbd504c48fd907b"; + name = "allchange___allchange_1.0.3.tgz"; + url = "https://registry.yarnpkg.com/allchange/-/allchange-1.0.3.tgz"; + sha1 = "f8814ddfbcfe39a01bf4570778ee7e6d9ff0ebb3"; }; } { @@ -922,11 +938,11 @@ }; } { - name = "ansi_regex___ansi_regex_5.0.0.tgz"; + name = "ansi_regex___ansi_regex_5.0.1.tgz"; path = fetchurl { - name = "ansi_regex___ansi_regex_5.0.0.tgz"; - url = "https://registry.yarnpkg.com/ansi-regex/-/ansi-regex-5.0.0.tgz"; - sha1 = "388539f55179bf39339c81af30a654d69f87cb75"; + name = "ansi_regex___ansi_regex_5.0.1.tgz"; + url = "https://registry.yarnpkg.com/ansi-regex/-/ansi-regex-5.0.1.tgz"; + sha1 = "082cb2c89c9fe8659a311a53bd6a4dc5301db304"; }; } { @@ -1010,11 +1026,11 @@ }; } { - name = "are_we_there_yet___are_we_there_yet_1.1.5.tgz"; + name = "are_we_there_yet___are_we_there_yet_1.1.7.tgz"; path = fetchurl { - name = "are_we_there_yet___are_we_there_yet_1.1.5.tgz"; - url = "https://registry.yarnpkg.com/are-we-there-yet/-/are-we-there-yet-1.1.5.tgz"; - sha1 = "4b35c2944f062a8bfcda66410760350fe9ddfc21"; + name = "are_we_there_yet___are_we_there_yet_1.1.7.tgz"; + url = "https://registry.yarnpkg.com/are-we-there-yet/-/are-we-there-yet-1.1.7.tgz"; + sha1 = "b15474a932adab4ff8a50d9adfa7e4e926f21146"; }; } { @@ -1050,11 +1066,11 @@ }; } { - name = "asar___asar_3.0.3.tgz"; + name = "asar___asar_3.1.0.tgz"; path = fetchurl { - name = "asar___asar_3.0.3.tgz"; - url = "https://registry.yarnpkg.com/asar/-/asar-3.0.3.tgz"; - sha1 = "1fef03c2d6d2de0cbad138788e4f7ae03b129c7b"; + name = "asar___asar_3.1.0.tgz"; + url = "https://registry.yarnpkg.com/asar/-/asar-3.1.0.tgz"; + sha1 = "70b0509449fe3daccc63beb4d3c7d2e24d3c6473"; }; } { @@ -1234,11 +1250,11 @@ }; } { - name = "boxen___boxen_5.0.1.tgz"; + name = "boxen___boxen_5.1.1.tgz"; path = fetchurl { - name = "boxen___boxen_5.0.1.tgz"; - url = "https://registry.yarnpkg.com/boxen/-/boxen-5.0.1.tgz"; - sha1 = "657528bdd3f59a772b8279b831f27ec2c744664b"; + name = "boxen___boxen_5.1.1.tgz"; + url = "https://registry.yarnpkg.com/boxen/-/boxen-5.1.1.tgz"; + sha1 = "4faca6a437885add0bf8d99082e272d480814cd4"; }; } { @@ -1322,11 +1338,11 @@ }; } { - name = "cacache___cacache_15.2.0.tgz"; + name = "cacache___cacache_15.3.0.tgz"; path = fetchurl { - name = "cacache___cacache_15.2.0.tgz"; - url = "https://registry.yarnpkg.com/cacache/-/cacache-15.2.0.tgz"; - sha1 = "73af75f77c58e72d8c630a7a2858cb18ef523389"; + name = "cacache___cacache_15.3.0.tgz"; + url = "https://registry.yarnpkg.com/cacache/-/cacache-15.3.0.tgz"; + sha1 = "dc85380fb2f556fe3dda4c719bfa0ec875a7f1eb"; }; } { @@ -1610,11 +1626,11 @@ }; } { - name = "core_js___core_js_3.16.3.tgz"; + name = "core_js___core_js_3.17.3.tgz"; path = fetchurl { - name = "core_js___core_js_3.16.3.tgz"; - url = "https://registry.yarnpkg.com/core-js/-/core-js-3.16.3.tgz"; - sha1 = "1f2d43c51a9ed014cc6c83440af14697ae4b75f2"; + name = "core_js___core_js_3.17.3.tgz"; + url = "https://registry.yarnpkg.com/core-js/-/core-js-3.17.3.tgz"; + sha1 = "8e8bd20e91df9951e903cabe91f9af4a0895bc1e"; }; } { @@ -1626,6 +1642,14 @@ }; } { + name = "core_util_is___core_util_is_1.0.3.tgz"; + path = fetchurl { + name = "core_util_is___core_util_is_1.0.3.tgz"; + url = "https://registry.yarnpkg.com/core-util-is/-/core-util-is-1.0.3.tgz"; + sha1 = "a6042d3634c2b27e9328f837b965fac83808db85"; + }; + } + { name = "counterpart___counterpart_0.18.6.tgz"; path = fetchurl { name = "counterpart___counterpart_0.18.6.tgz"; @@ -1754,11 +1778,11 @@ }; } { - name = "deep_is___deep_is_0.1.3.tgz"; + name = "deep_is___deep_is_0.1.4.tgz"; path = fetchurl { - name = "deep_is___deep_is_0.1.3.tgz"; - url = "https://registry.yarnpkg.com/deep-is/-/deep-is-0.1.3.tgz"; - sha1 = "b369d6fb5dbc13eecf524f91b070feedc357cf34"; + name = "deep_is___deep_is_0.1.4.tgz"; + url = "https://registry.yarnpkg.com/deep-is/-/deep-is-0.1.4.tgz"; + sha1 = "a6f2dce612fadd2ef1f519b73551f17e85199831"; }; } { @@ -1946,11 +1970,11 @@ }; } { - name = "electron_notarize___electron_notarize_1.1.0.tgz"; + name = "electron_notarize___electron_notarize_1.1.1.tgz"; path = fetchurl { - name = "electron_notarize___electron_notarize_1.1.0.tgz"; - url = "https://registry.yarnpkg.com/electron-notarize/-/electron-notarize-1.1.0.tgz"; - sha1 = "00ed0182366b97f5593cb5ccdcf1120f1de37179"; + name = "electron_notarize___electron_notarize_1.1.1.tgz"; + url = "https://registry.yarnpkg.com/electron-notarize/-/electron-notarize-1.1.1.tgz"; + sha1 = "3ed274b36158c1beb1dbef14e7faf5927e028629"; }; } { @@ -1978,11 +2002,11 @@ }; } { - name = "electron___electron_13.2.2.tgz"; + name = "electron___electron_13.4.0.tgz"; path = fetchurl { - name = "electron___electron_13.2.2.tgz"; - url = "https://registry.yarnpkg.com/electron/-/electron-13.2.2.tgz"; - sha1 = "332d91891d0db4f9a1d22d4d0bc3b500e59dc051"; + name = "electron___electron_13.4.0.tgz"; + url = "https://registry.yarnpkg.com/electron/-/electron-13.4.0.tgz"; + sha1 = "f9f9e518d8c6bf23bfa8b69580447eea3ca0f880"; }; } { @@ -2346,11 +2370,11 @@ }; } { - name = "fastq___fastq_1.12.0.tgz"; + name = "fastq___fastq_1.13.0.tgz"; path = fetchurl { - name = "fastq___fastq_1.12.0.tgz"; - url = "https://registry.yarnpkg.com/fastq/-/fastq-1.12.0.tgz"; - sha1 = "ed7b6ab5d62393fb2cc591c853652a5c318bf794"; + name = "fastq___fastq_1.13.0.tgz"; + url = "https://registry.yarnpkg.com/fastq/-/fastq-1.13.0.tgz"; + sha1 = "616760f88a7526bdfc596b7cab8c18938c36b98c"; }; } { @@ -3602,11 +3626,11 @@ }; } { - name = "minipass_fetch___minipass_fetch_1.3.4.tgz"; + name = "minipass_fetch___minipass_fetch_1.4.1.tgz"; path = fetchurl { - name = "minipass_fetch___minipass_fetch_1.3.4.tgz"; - url = "https://registry.yarnpkg.com/minipass-fetch/-/minipass-fetch-1.3.4.tgz"; - sha1 = "63f5af868a38746ca7b33b03393ddf8c291244fe"; + name = "minipass_fetch___minipass_fetch_1.4.1.tgz"; + url = "https://registry.yarnpkg.com/minipass-fetch/-/minipass-fetch-1.4.1.tgz"; + sha1 = "d75e0091daac1b0ffd7e9d41629faff7d0c1f1b6"; }; } { @@ -3650,11 +3674,11 @@ }; } { - name = "minipass___minipass_3.1.3.tgz"; + name = "minipass___minipass_3.1.5.tgz"; path = fetchurl { - name = "minipass___minipass_3.1.3.tgz"; - url = "https://registry.yarnpkg.com/minipass/-/minipass-3.1.3.tgz"; - sha1 = "7d42ff1f39635482e15f9cdb53184deebd5815fd"; + name = "minipass___minipass_3.1.5.tgz"; + url = "https://registry.yarnpkg.com/minipass/-/minipass-3.1.5.tgz"; + sha1 = "71f6251b0a33a49c01b3cf97ff77eda030dff732"; }; } { @@ -3722,11 +3746,11 @@ }; } { - name = "needle___needle_2.9.0.tgz"; + name = "needle___needle_2.9.1.tgz"; path = fetchurl { - name = "needle___needle_2.9.0.tgz"; - url = "https://registry.yarnpkg.com/needle/-/needle-2.9.0.tgz"; - sha1 = "c680e401f99b6c3d8d1f315756052edf3dc3bdff"; + name = "needle___needle_2.9.1.tgz"; + url = "https://registry.yarnpkg.com/needle/-/needle-2.9.1.tgz"; + sha1 = "22d1dffbe3490c2b83e301f7709b6736cd8f2684"; }; } { @@ -3762,11 +3786,11 @@ }; } { - name = "node_fetch___node_fetch_2.6.1.tgz"; + name = "node_fetch___node_fetch_2.6.2.tgz"; path = fetchurl { - name = "node_fetch___node_fetch_2.6.1.tgz"; - url = "https://registry.yarnpkg.com/node-fetch/-/node-fetch-2.6.1.tgz"; - sha1 = "045bd323631f76ed2e2b55573394416b639a0052"; + name = "node_fetch___node_fetch_2.6.2.tgz"; + url = "https://registry.yarnpkg.com/node-fetch/-/node-fetch-2.6.2.tgz"; + sha1 = "986996818b73785e47b1965cc34eb093a1d464d0"; }; } { @@ -4178,11 +4202,11 @@ }; } { - name = "plist___plist_3.0.3.tgz"; + name = "plist___plist_3.0.4.tgz"; path = fetchurl { - name = "plist___plist_3.0.3.tgz"; - url = "https://registry.yarnpkg.com/plist/-/plist-3.0.3.tgz"; - sha1 = "007df34c7be0e2c3dcfcf460d623e6485457857d"; + name = "plist___plist_3.0.4.tgz"; + url = "https://registry.yarnpkg.com/plist/-/plist-3.0.4.tgz"; + sha1 = "a62df837e3aed2bb3b735899d510c4f186019cbe"; }; } { @@ -4666,11 +4690,11 @@ }; } { - name = "socks_proxy_agent___socks_proxy_agent_6.0.0.tgz"; + name = "socks_proxy_agent___socks_proxy_agent_6.1.0.tgz"; path = fetchurl { - name = "socks_proxy_agent___socks_proxy_agent_6.0.0.tgz"; - url = "https://registry.yarnpkg.com/socks-proxy-agent/-/socks-proxy-agent-6.0.0.tgz"; - sha1 = "9f8749cdc05976505fa9f9a958b1818d0e60573b"; + name = "socks_proxy_agent___socks_proxy_agent_6.1.0.tgz"; + url = "https://registry.yarnpkg.com/socks-proxy-agent/-/socks-proxy-agent-6.1.0.tgz"; + sha1 = "869cf2d7bd10fea96c7ad3111e81726855e285c3"; }; } { @@ -4682,11 +4706,11 @@ }; } { - name = "source_map_support___source_map_support_0.5.19.tgz"; + name = "source_map_support___source_map_support_0.5.20.tgz"; path = fetchurl { - name = "source_map_support___source_map_support_0.5.19.tgz"; - url = "https://registry.yarnpkg.com/source-map-support/-/source-map-support-0.5.19.tgz"; - sha1 = "a98b62f86dcaf4f67399648c085291ab9e8fed61"; + name = "source_map_support___source_map_support_0.5.20.tgz"; + url = "https://registry.yarnpkg.com/source-map-support/-/source-map-support-0.5.20.tgz"; + sha1 = "12166089f8f5e5e8c56926b377633392dd2cb6c9"; }; } { @@ -4890,11 +4914,11 @@ }; } { - name = "tar___tar_6.1.10.tgz"; + name = "tar___tar_6.1.11.tgz"; path = fetchurl { - name = "tar___tar_6.1.10.tgz"; - url = "https://registry.yarnpkg.com/tar/-/tar-6.1.10.tgz"; - sha1 = "8a320a74475fba54398fa136cd9883aa8ad11175"; + name = "tar___tar_6.1.11.tgz"; + url = "https://registry.yarnpkg.com/tar/-/tar-6.1.11.tgz"; + sha1 = "6760a38f003afa1b2ffd0ffe9e9abbd0eab3d621"; }; } { @@ -5130,11 +5154,11 @@ }; } { - name = "typescript___typescript_4.3.5.tgz"; + name = "typescript___typescript_4.4.3.tgz"; path = fetchurl { - name = "typescript___typescript_4.3.5.tgz"; - url = "https://registry.yarnpkg.com/typescript/-/typescript-4.3.5.tgz"; - sha1 = "4d1c37cc16e893973c45a06886b7113234f119f4"; + name = "typescript___typescript_4.4.3.tgz"; + url = "https://registry.yarnpkg.com/typescript/-/typescript-4.4.3.tgz"; + sha1 = "bdc5407caa2b109efd4f82fe130656f977a29324"; }; } { @@ -5410,14 +5434,6 @@ }; } { - name = "xmldom___xmldom_0.6.0.tgz"; - path = fetchurl { - name = "xmldom___xmldom_0.6.0.tgz"; - url = "https://registry.yarnpkg.com/xmldom/-/xmldom-0.6.0.tgz"; - sha1 = "43a96ecb8beece991cef382c08397d82d4d0c46f"; - }; - } - { name = "xtend___xtend_4.0.2.tgz"; path = fetchurl { name = "xtend___xtend_4.0.2.tgz"; diff --git a/pkgs/applications/networking/instant-messengers/element/element-desktop.nix b/pkgs/applications/networking/instant-messengers/element/element-desktop.nix index 27a5204e9e9..c14f408441f 100644 --- a/pkgs/applications/networking/instant-messengers/element/element-desktop.nix +++ b/pkgs/applications/networking/instant-messengers/element/element-desktop.nix @@ -19,12 +19,12 @@ let executableName = "element-desktop"; - version = "1.8.5"; + version = "1.9.0"; src = fetchFromGitHub { owner = "vector-im"; repo = "element-desktop"; rev = "v${version}"; - sha256 = "sha256-i9PWGEcf+EOn6j++GuYt6xmwYycmW5hE5xhpRMOFBGM="; + sha256 = "sha256-vsLu41n3oCSyyPLgASs7jZViu6DPkWmMfSO7414VPO4="; }; electron_exec = if stdenv.isDarwin then "${electron}/Applications/Electron.app/Contents/MacOS/Electron" else "${electron}/bin/electron"; in diff --git a/pkgs/applications/networking/instant-messengers/element/element-web.nix b/pkgs/applications/networking/instant-messengers/element/element-web.nix index 05c5e732ced..d1f128dda15 100644 --- a/pkgs/applications/networking/instant-messengers/element/element-web.nix +++ b/pkgs/applications/networking/instant-messengers/element/element-web.nix @@ -12,11 +12,11 @@ let in stdenv.mkDerivation rec { pname = "element-web"; - version = "1.8.5"; + version = "1.9.0"; src = fetchurl { url = "https://github.com/vector-im/element-web/releases/download/v${version}/element-v${version}.tar.gz"; - sha256 = "sha256-E3H6iXBRi4mnhu0mu96ly9f8AYOiMFf9zTcpjDmfHy4="; + sha256 = "sha256-QMLa1Bgz9feAAR9PKVXAzlRDztJBZnGIG+SsPgwvYRw="; }; installPhase = '' diff --git a/pkgs/applications/networking/instant-messengers/jackline/default.nix b/pkgs/applications/networking/instant-messengers/jackline/default.nix index 89d4931a2fe..3bd1564af2a 100644 --- a/pkgs/applications/networking/instant-messengers/jackline/default.nix +++ b/pkgs/applications/networking/instant-messengers/jackline/default.nix @@ -4,7 +4,7 @@ with ocamlPackages; buildDunePackage rec { pname = "jackline"; - version = "unstable-2021-04-23"; + version = "unstable-2021-08-10"; minimumOCamlVersion = "4.08"; @@ -13,8 +13,8 @@ buildDunePackage rec { src = fetchFromGitHub { owner = "hannesm"; repo = "jackline"; - rev = "861c59bb7cd27ad5c7558ff94cb0d0e8dca249e5"; - sha256 = "00waw5qr0n70i9l9b25r9ryfi836x4qrj046bb4k9qa4d0p8q1sa"; + rev = "73d87e9a62d534566bb0fbe64990d32d75487f11"; + sha256 = "0wk574rqfg2vqz27nasxzwf67x51pj5fgl4vkc27r741dg4q6c5a"; }; nativeBuildInpts = [ diff --git a/pkgs/applications/networking/instant-messengers/quaternion/default.nix b/pkgs/applications/networking/instant-messengers/quaternion/default.nix index 31b37fc2dfb..359c0fa7aac 100644 --- a/pkgs/applications/networking/instant-messengers/quaternion/default.nix +++ b/pkgs/applications/networking/instant-messengers/quaternion/default.nix @@ -1,17 +1,27 @@ -{ mkDerivation, stdenv, lib, fetchFromGitHub, cmake -, qtbase, qtquickcontrols, qtquickcontrols2, qtkeychain, qtmultimedia, qttools -, libquotient, libsecret +{ mkDerivation +, stdenv +, lib +, fetchFromGitHub +, cmake +, qtbase +, qtquickcontrols +, qtquickcontrols2 +, qtkeychain +, qtmultimedia +, qttools +, libquotient +, libsecret }: mkDerivation rec { pname = "quaternion"; - version = "0.0.9.5-beta2"; + version = "0.0.95"; src = fetchFromGitHub { owner = "QMatrixClient"; repo = "Quaternion"; rev = version; - sha256 = "sha256-K4SMB5kL0YO2OIeNUu4hWqU4E4n4vZDRRsJVYmCZqvM="; + sha256 = "sha256-WqhHqo4ySxufulC+TxS2ko2R5hUiORgdNAkp5Awdcw8="; }; buildInputs = [ @@ -26,14 +36,15 @@ mkDerivation rec { nativeBuildInputs = [ cmake qttools ]; - postInstall = if stdenv.isDarwin then '' - mkdir -p $out/Applications - mv $out/bin/quaternion.app $out/Applications - rmdir $out/bin || : - '' else '' - substituteInPlace $out/share/applications/com.github.quaternion.desktop \ - --replace 'Exec=quaternion' "Exec=$out/bin/quaternion" - ''; + postInstall = + if stdenv.isDarwin then '' + mkdir -p $out/Applications + mv $out/bin/quaternion.app $out/Applications + rmdir $out/bin || : + '' else '' + substituteInPlace $out/share/applications/com.github.quaternion.desktop \ + --replace 'Exec=quaternion' "Exec=$out/bin/quaternion" + ''; meta = with lib; { description = diff --git a/pkgs/applications/networking/irc/weechat/scripts/default.nix b/pkgs/applications/networking/irc/weechat/scripts/default.nix index f83b6705348..a3cf55d6a03 100644 --- a/pkgs/applications/networking/irc/weechat/scripts/default.nix +++ b/pkgs/applications/networking/irc/weechat/scripts/default.nix @@ -30,4 +30,6 @@ buffer_autoset = callPackage ./buffer_autoset { }; highmon = callPackage ./highmon { }; + + zncplayback = callPackage ./zncplayback { }; } diff --git a/pkgs/applications/networking/irc/weechat/scripts/zncplayback/default.nix b/pkgs/applications/networking/irc/weechat/scripts/zncplayback/default.nix new file mode 100644 index 00000000000..d15b130cae2 --- /dev/null +++ b/pkgs/applications/networking/irc/weechat/scripts/zncplayback/default.nix @@ -0,0 +1,28 @@ +{ lib, stdenv, fetchurl }: + +stdenv.mkDerivation { + pname = "weechat-zncplayback"; + version = "0.2.1"; + + src = fetchurl { + url = "https://github.com/weechat/scripts/raw/bcc9643136addd2cd68ac957dd64e336e4f88aa1/python/zncplayback.py"; + sha256 = "1k32p6naxg40g664ip48zvm61xza7l9az3v3rawmjw97i0mwz7y3"; + }; + + dontUnpack = true; + + installPhase = '' + mkdir -p $out/share + cp $src $out/share/zncplayback.py + ''; + + passthru = { + scripts = [ "zncplayback.py" ]; + }; + + meta = with lib; { + description = "Add support for the ZNC Playback module"; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ qyliss ]; + }; +} diff --git a/pkgs/applications/networking/mpop/default.nix b/pkgs/applications/networking/mpop/default.nix index 613226a2dc1..75f620ead9c 100644 --- a/pkgs/applications/networking/mpop/default.nix +++ b/pkgs/applications/networking/mpop/default.nix @@ -4,11 +4,11 @@ with lib; stdenv.mkDerivation rec { pname = "mpop"; - version = "1.4.13"; + version = "1.4.14"; src = fetchurl { url = "https://marlam.de/${pname}/releases/${pname}-${version}.tar.xz"; - sha256 = "sha256-s0mEZsZbZQrdGm55IJsnuoY3VnOkXJalknvtaFoyfcE="; + sha256 = "046wbglvry54id9wik6c020fs09piv3gig3z0nh5nmyhsxjw4i18"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/pkgs/applications/networking/onionshare/default.nix b/pkgs/applications/networking/onionshare/default.nix index f80fb3a7395..074fb770b53 100644 --- a/pkgs/applications/networking/onionshare/default.nix +++ b/pkgs/applications/networking/onionshare/default.nix @@ -1,52 +1,52 @@ -{ - lib, - buildPythonApplication, - substituteAll, - fetchFromGitHub, - isPy3k, - colorama, - flask, - flask-httpauth, - flask-socketio, - stem, - psutil, - pyqt5, - pycrypto, - pyside2, - pytestCheckHook, - qrcode, - qt5, - requests, - unidecode, - tor, - obfs4, +{ lib +, buildPythonApplication +, substituteAll +, fetchFromGitHub +, isPy3k +, colorama +, flask +, flask-httpauth +, flask-socketio +, stem +, psutil +, pyqt5 +, pycrypto +, pynacl +, pyside2 +, pytestCheckHook +, qrcode +, qt5 +, requests +, unidecode +, tor +, obfs4 }: let - version = "2.3.3"; + version = "2.4"; src = fetchFromGitHub { - owner = "micahflee"; + owner = "onionshare"; repo = "onionshare"; rev = "v${version}"; - sha256 = "sha256-wU2020RNXlwJ2y9uzcLxIX4EECev1Z9YvNyiBalLj/Y="; + sha256 = "sha256-Lclm7mIkaAkQpWcNILTRJtLA43dpiyHtWAeHS2r3+ZQ="; }; meta = with lib; { description = "Securely and anonymously send and receive files"; longDescription = '' - OnionShare is an open source tool for securely and anonymously sending - and receiving files using Tor onion services. It works by starting a web - server directly on your computer and making it accessible as an - unguessable Tor web address that others can load in Tor Browser to - download files from you, or upload files to you. It doesn't require - setting up a separate server, using a third party file-sharing service, - or even logging into an account. - - Unlike services like email, Google Drive, DropBox, WeTransfer, or nearly - any other way people typically send files to each other, when you use - OnionShare you don't give any companies access to the files that you're - sharing. So long as you share the unguessable web address in a secure way - (like pasting it in an encrypted messaging app), no one but you and the - person you're sharing with can access the files. + OnionShare is an open source tool for securely and anonymously sending + and receiving files using Tor onion services. It works by starting a web + server directly on your computer and making it accessible as an + unguessable Tor web address that others can load in Tor Browser to + download files from you, or upload files to you. It doesn't require + setting up a separate server, using a third party file-sharing service, + or even logging into an account. + + Unlike services like email, Google Drive, DropBox, WeTransfer, or nearly + any other way people typically send files to each other, when you use + OnionShare you don't give any companies access to the files that you're + sharing. So long as you share the unguessable web address in a secure way + (like pasting it in an encrypted messaging app), no one but you and the + person you're sharing with can access the files. ''; homepage = "https://onionshare.org/"; @@ -54,8 +54,19 @@ let license = licenses.gpl3Plus; maintainers = with maintainers; [ lourkeur ]; }; + stem' = stem.overrideAttrs (_: rec { + version = "1.8.1"; + + src = fetchFromGitHub { + owner = "onionshare"; + repo = "stem"; + rev = version; + sha256 = "Dzpvx7CgAr5OtGmfubWAYDLqq5LkGqcwjr3bxpfL/3A="; + }; + }); -in rec { +in +rec { onionshare = buildPythonApplication { pname = "onionshare-cli"; inherit version meta; @@ -74,9 +85,10 @@ in rec { flask flask-httpauth flask-socketio - stem + stem' psutil pycrypto + pynacl requests unidecode ]; @@ -98,6 +110,7 @@ in rec { disabledTests = [ "test_firefox_like_behavior" "test_if_unmodified_since" + "test_get_tor_paths_linux" # expects /usr instead of /nix/store ]; }; diff --git a/pkgs/applications/networking/trebleshot/default.nix b/pkgs/applications/networking/trebleshot/default.nix deleted file mode 100644 index 82f91ddef8b..00000000000 --- a/pkgs/applications/networking/trebleshot/default.nix +++ /dev/null @@ -1,29 +0,0 @@ -{ mkDerivation, lib, fetchFromGitHub -, cmake, qtbase, kdnssd -}: - -mkDerivation rec { - pname = "trebleshot"; - version = "0.1.0-alpha2-15-ga7ac23c"; - # name="${pname}-${version}"; - - src = fetchFromGitHub { - owner = "genonbeta"; - repo = "TrebleShot-Desktop"; - rev = version; - sha256 = "1k8wagw6arsi1lqkhn1nl6j11mb122vi1qs0q2np6nznwfy7pn1k"; - }; - - nativeBuildInputs = [ cmake ]; - - buildInputs = [ qtbase kdnssd ]; - - meta = with lib; { - description = "Android file transferring tool for desktop"; - homepage = "https://github.com/genonbeta/TrebleShot-Desktop"; - license = licenses.gpl2; - - platforms = platforms.linux; - maintainers = with maintainers; [ woffs ]; - }; -} diff --git a/pkgs/applications/office/onlyoffice-bin/default.nix b/pkgs/applications/office/onlyoffice-bin/default.nix index 121a65f941c..214b8376d8d 100644 --- a/pkgs/applications/office/onlyoffice-bin/default.nix +++ b/pkgs/applications/office/onlyoffice-bin/default.nix @@ -147,10 +147,6 @@ stdenv.mkDerivation rec { ln -s $out/share/desktopeditors/DesktopEditors $out/bin/DesktopEditors - wrapProgram $out/bin/DesktopEditors \ - --set QT_XKB_CONFIG_ROOT ${xkeyboard_config}/share/X11/xkb \ - --set QTCOMPOSE ${xorg.libX11.out}/share/X11/locale - substituteInPlace $out/share/applications/onlyoffice-desktopeditors.desktop \ --replace "/usr/bin/onlyoffice-desktopeditor" "$out/bin/DesktopEditor" @@ -158,7 +154,13 @@ stdenv.mkDerivation rec { ''; preFixup = '' - gappsWrapperArgs+=(--prefix LD_LIBRARY_PATH : "${runtimeLibs}" ) + gappsWrapperArgs+=( + --prefix LD_LIBRARY_PATH : "${runtimeLibs}" \ + --set QT_XKB_CONFIG_ROOT "${xkeyboard_config}/share/X11/xkb" \ + --set QTCOMPOSE "${xorg.libX11.out}/share/X11/locale" \ + --set QT_QPA_PLATFORM "xcb" + # the bundled version of qt does not support wayland + ) ''; passthru.updateScript = ./update.sh; diff --git a/pkgs/applications/office/vnote/default.nix b/pkgs/applications/office/vnote/default.nix index b266ce86e2a..3519f015ffa 100644 --- a/pkgs/applications/office/vnote/default.nix +++ b/pkgs/applications/office/vnote/default.nix @@ -1,27 +1,31 @@ -{ lib, mkDerivation, fetchFromGitHub, qmake, qtbase, qtwebengine }: +{ lib +, mkDerivation +, fetchFromGitHub +, qmake +, qtbase +, qtwebengine +}: -let - description = "A note-taking application that knows programmers and Markdown better"; -in mkDerivation rec { - version = "2.10"; +mkDerivation rec { pname = "vnote"; + version = "3.7.0"; src = fetchFromGitHub { - owner = "tamlok"; - repo = "vnote"; + owner = "vnotex"; + repo = pname; fetchSubmodules = true; rev = "v${version}"; - sha256 = "EeeVGnKI0irLO1zJQxlVlIUhqG987JIgxNvKpUgLxUQ="; + sha256 = "sha256-D9/4BakXTComvGTV8F131G5PzA8LhWfNSZRBOMo5t5c="; }; nativeBuildInputs = [ qmake ]; buildInputs = [ qtbase qtwebengine ]; meta = with lib; { - inherit description; - homepage = "https://tamlok.github.io/vnote"; + homepage = "https://vnotex.github.io/vnote"; + description = "A pleasant note-taking platform"; license = licenses.mit; + maintainers = with maintainers; [ AndersonTorres ]; platforms = platforms.linux; - maintainers = [ maintainers.kuznero ]; }; } diff --git a/pkgs/applications/radio/sdrangel/default.nix b/pkgs/applications/radio/sdrangel/default.nix index e9a15aaed19..fd742474ec1 100644 --- a/pkgs/applications/radio/sdrangel/default.nix +++ b/pkgs/applications/radio/sdrangel/default.nix @@ -33,13 +33,13 @@ mkDerivation rec { pname = "sdrangel"; - version = "6.16.2"; + version = "6.16.3"; src = fetchFromGitHub { owner = "f4exb"; repo = "sdrangel"; rev = "v${version}"; - sha256 = "sha256-wWGKJWd3JDaT0dDMUrxv9ShMVe+q4zvH8SjyKw7UIbo="; + sha256 = "sha256-qgFnl9IliKRI4TptpXyK9JHzpLEUQ7NZLIfc0AROCvA="; fetchSubmodules = false; }; diff --git a/pkgs/applications/science/astronomy/stellarium/default.nix b/pkgs/applications/science/astronomy/stellarium/default.nix index 2e28d9d83e5..02ef96e2e12 100644 --- a/pkgs/applications/science/astronomy/stellarium/default.nix +++ b/pkgs/applications/science/astronomy/stellarium/default.nix @@ -6,13 +6,13 @@ mkDerivation rec { pname = "stellarium"; - version = "0.21.1"; + version = "0.21.2"; src = fetchFromGitHub { owner = "Stellarium"; repo = "stellarium"; rev = "v${version}"; - sha256 = "sha256-dAdB57phD5phl8dQZIHtqtnA2LZqR+JoXTzIBtqBevA="; + sha256 = "sha256-bh00o++l3sqELX5kgRhiCcQOLVqvjEyEMcJTnnVPNU8="; }; nativeBuildInputs = [ cmake perl wrapQtAppsHook ]; diff --git a/pkgs/applications/science/logic/symbiyosys/default.nix b/pkgs/applications/science/logic/symbiyosys/default.nix index 118bb8ecd20..87bd1e2e637 100644 --- a/pkgs/applications/science/logic/symbiyosys/default.nix +++ b/pkgs/applications/science/logic/symbiyosys/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation { pname = "symbiyosys"; - version = "2020.08.22"; + version = "2021.09.13"; src = fetchFromGitHub { owner = "YosysHQ"; repo = "SymbiYosys"; - rev = "33b0bb7d836fe2a73dc7b10587222f2a718beef4"; - sha256 = "03rbrbwsji1sqcp2yhgbc0fca04zsryv2g4izjhdzv64nqjzjyhn"; + rev = "15278f13467bea24a7300e23ebc5555b9261facf"; + sha256 = "sha256-gp9F4MaGgD6XfD7AjuB/LmMVcxFurqWHEiXPeyzlQzk="; }; buildInputs = [ ]; diff --git a/pkgs/applications/science/logic/z3/default.nix b/pkgs/applications/science/logic/z3/default.nix index e482a071bb4..4153ba5f66f 100644 --- a/pkgs/applications/science/logic/z3/default.nix +++ b/pkgs/applications/science/logic/z3/default.nix @@ -19,13 +19,13 @@ with lib; stdenv.mkDerivation rec { pname = "z3"; - version = "4.8.10"; + version = "4.8.12"; src = fetchFromGitHub { owner = "Z3Prover"; repo = pname; rev = "z3-${version}"; - sha256 = "1w1ym2l0gipvjx322npw7lhclv8rslq58gnj0d9i96masi3gbycf"; + sha256 = "1wbcdc7h3mag8infspvxxja2hiz4igjwxzvss2kqar1rjj4ivfx0"; }; nativeBuildInputs = optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames; diff --git a/pkgs/applications/science/math/caffe/default.nix b/pkgs/applications/science/math/caffe/default.nix index 08bf84be7c8..462a05d300c 100644 --- a/pkgs/applications/science/math/caffe/default.nix +++ b/pkgs/applications/science/math/caffe/default.nix @@ -91,7 +91,11 @@ stdenv.mkDerivation rec { inherit (python.sourceVersion) major minor; # Should be changed in case of PyPy }); - postPatch = lib.optionalString (cudaSupport && lib.versionAtLeast cudatoolkit.version "9.0") '' + postPatch = '' + substituteInPlace src/caffe/util/io.cpp --replace \ + 'SetTotalBytesLimit(kProtoReadBytesLimit, 536870912)' \ + 'SetTotalBytesLimit(kProtoReadBytesLimit)' + '' + lib.optionalString (cudaSupport && lib.versionAtLeast cudatoolkit.version "9.0") '' # CUDA 9.0 doesn't support sm_20 sed -i 's,20 21(20) ,,' cmake/Cuda.cmake ''; diff --git a/pkgs/applications/science/math/cntk/default.nix b/pkgs/applications/science/math/cntk/default.nix index c007490c94d..ba2225b903f 100644 --- a/pkgs/applications/science/math/cntk/default.nix +++ b/pkgs/applications/science/math/cntk/default.nix @@ -1,4 +1,5 @@ { lib, stdenv, fetchgit, fetchFromGitHub, cmake +, fetchpatch , openblas, blas, lapack, opencv3, libzip, boost, protobuf, mpi , onebitSGDSupport ? false , cudaSupport ? false, addOpenGLRunpath, cudatoolkit, nvidia_x11 @@ -28,6 +29,26 @@ in stdenv.mkDerivation rec { sha256 = "18l9k7s966a26ywcf7flqyhm61788pcb9fj3wk61jrmgkhy2pcns"; }; + patches = [ + # Fix build with protobuf 3.18+ + # Remove with onnx submodule bump to 1.9+ + (fetchpatch { + url = "https://github.com/onnx/onnx/commit/d3bc82770474761571f950347560d62a35d519d7.patch"; + extraPrefix = "Source/CNTKv2LibraryDll/proto/onnx/onnx_repo/"; + stripLen = 1; + sha256 = "00raqj8wx30b06ky6cdp5vvc1mrzs7hglyi6h58hchw5lhrwkzxp"; + }) + ]; + + postPatch = '' + # Fix build with protobuf 3.18+ + substituteInPlace Source/CNTKv2LibraryDll/Serialization.cpp \ + --replace 'SetTotalBytesLimit(INT_MAX, INT_MAX)' \ + 'SetTotalBytesLimit(INT_MAX)' \ + --replace 'SetTotalBytesLimit(limit, limit)' \ + 'SetTotalBytesLimit(limit)' + ''; + nativeBuildInputs = [ cmake ] ++ lib.optional cudaSupport addOpenGLRunpath; # Force OpenMPI to use g++ in PATH. diff --git a/pkgs/applications/science/math/sage/threejs-sage.nix b/pkgs/applications/science/math/sage/threejs-sage.nix index 0e4ad4dee95..bc7230f333a 100644 --- a/pkgs/applications/science/math/sage/threejs-sage.nix +++ b/pkgs/applications/science/math/sage/threejs-sage.nix @@ -12,7 +12,8 @@ stdenv.mkDerivation rec { }; installPhase = '' - mkdir -p $out/lib/node_modules/three - cp -r build version $out/lib/node_modules/three + mkdir -p "$out/lib/node_modules/three/" + cp version "$out/lib/node_modules/three" + cp -r build "$out/lib/node_modules/three/$(cat version)" ''; } diff --git a/pkgs/applications/science/misc/gplates/default.nix b/pkgs/applications/science/misc/gplates/default.nix index d0315d15967..67ab202160c 100644 --- a/pkgs/applications/science/misc/gplates/default.nix +++ b/pkgs/applications/science/misc/gplates/default.nix @@ -1,31 +1,69 @@ -{ lib, stdenv, fetchurl, qt4, qwt6_qt4, libGLU, libGL, glew, gdal, cgal -, proj, boost, cmake, python2, doxygen, graphviz, gmp, mpfr }: +{ lib +, mkDerivation +, fetchurl +, cmake +, doxygen +, graphviz +, boost +, cgal_5 +, gdal +, glew +, gmp +, libGL +, libGLU +, mpfr +, proj +, python3 +, qtxmlpatterns +, qwt +}: -stdenv.mkDerivation rec { +let + python = python3.withPackages (ps: with ps; [ + numpy + ]); + boost' = boost.override { + enablePython = true; + inherit python; + }; + cgal = cgal_5.override { + boost = boost'; + }; +in mkDerivation rec { pname = "gplates"; - version = "2.2.0"; + version = "2.3.0"; src = fetchurl { - url = "mirror://sourceforge/gplates/${pname}-${version}-unixsrc.tar.bz2"; - sha256 = "1jrcv498vpcs8xklhbsgg12yfa90f96p2mwq6x5sjnrlpf8mh50b"; + name = "gplates_${version}_src.tar.bz2"; + url = "https://www.earthbyte.org/download/8421/?uid=b89bb31428"; + sha256 = "0lrcmcxc924ixddii8cyglqlwwxvk7f00g4yzbss5i3fgcbh8n96"; }; - nativeBuildInputs = [ cmake ]; - buildInputs = [ - qt4 qwt6_qt4 libGLU libGL glew gdal cgal proj python2 - doxygen graphviz gmp mpfr - (boost.override { - enablePython = true; - python = python2; - }) + nativeBuildInputs = [ + cmake + doxygen + graphviz ]; - NIX_CFLAGS_LINK="-ldl -lpthread -lutil"; + buildInputs = [ + boost' + cgal + gdal + glew + gmp + libGL + libGLU + mpfr + proj + python + qtxmlpatterns + qwt + ]; meta = with lib; { description = "Desktop software for the interactive visualisation of plate-tectonics"; homepage = "https://www.gplates.org"; - license = licenses.gpl2; + license = licenses.gpl2Only; platforms = platforms.all; }; } diff --git a/pkgs/applications/system/monitor/default.nix b/pkgs/applications/system/monitor/default.nix index afe18c399a3..f5d36c332ae 100644 --- a/pkgs/applications/system/monitor/default.nix +++ b/pkgs/applications/system/monitor/default.nix @@ -10,7 +10,6 @@ , gettext , glib , gtk3 -, bamf , libwnck , libgee , libgtop @@ -19,13 +18,13 @@ stdenv.mkDerivation rec { pname = "monitor"; - version = "0.9.5"; + version = "0.10.0"; src = fetchFromGitHub { owner = "stsdc"; repo = "monitor"; rev = version; - sha256 = "sha256-eTsPn2Z1++KsZnnBnZ2s9fKK2HguPw+JqaRRkxQDiAk="; + sha256 = "sha256-Gin/1vbQbOAKFrjzDuDTNDQlTGTIlb0NUfIWWXd5tQ4="; fetchSubmodules = true; }; @@ -40,7 +39,6 @@ stdenv.mkDerivation rec { ]; buildInputs = [ - bamf glib gtk3 pantheon.granite diff --git a/pkgs/applications/terminal-emulators/aminal/default.nix b/pkgs/applications/terminal-emulators/aminal/default.nix deleted file mode 100644 index 70d0d083dcf..00000000000 --- a/pkgs/applications/terminal-emulators/aminal/default.nix +++ /dev/null @@ -1,69 +0,0 @@ -{ buildGoPackage -, Carbon -, Cocoa -, Kernel -, fetchFromGitHub -, lib -, mesa_glu -, stdenv -, xorg -}: - -buildGoPackage rec { - pname = "aminal"; - version = "0.9.0"; - - goPackagePath = "github.com/liamg/aminal"; - - buildInputs = - lib.optionals stdenv.isLinux [ - mesa_glu - xorg.libX11 - xorg.libXcursor - xorg.libXi - xorg.libXinerama - xorg.libXrandr - xorg.libXxf86vm - ] ++ lib.optionals stdenv.isDarwin [ Carbon Cocoa Kernel ]; - - src = fetchFromGitHub { - owner = "liamg"; - repo = "aminal"; - rev = "v${version}"; - sha256 = "0syv9md7blnl6i19zf8s1xjx5vfz6s755fxyg2ply0qc1pwhsj8n"; - }; - - ldflags = [ - "-X ${goPackagePath}/version.Version=${version}" - ]; - - meta = with lib; { - description = "Golang terminal emulator from scratch"; - longDescription = '' - Aminal is a modern terminal emulator for Mac/Linux implemented in Golang - and utilising OpenGL. - - The project is experimental at the moment, so you probably won't want to - rely on Aminal as your main terminal for a while. - - Features: - - Unicode support - - OpenGL rendering - - Customisation options - - True colour support - - Support for common ANSI escape sequences a la xterm - - Scrollback buffer - - Clipboard access - - Clickable URLs - - Multi platform support (Windows coming soon...) - - Sixel support - - Hints/overlays - - Built-in patched fonts for powerline - - Retina display support - ''; - homepage = "https://github.com/liamg/aminal"; - license = licenses.gpl3; - maintainers = with maintainers; [ kalbasit ]; - platforms = platforms.linux ++ platforms.darwin; - }; -} diff --git a/pkgs/applications/version-management/git-and-tools/git-extras/default.nix b/pkgs/applications/version-management/git-and-tools/git-extras/default.nix index 387a1cb59c5..d57fe657517 100644 --- a/pkgs/applications/version-management/git-and-tools/git-extras/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git-extras/default.nix @@ -11,15 +11,21 @@ stdenv.mkDerivation rec { sha256 = "sha256-ACuTb1DGft2/32Ezg23jhpl9yua5kUTZ2kKL8KHU+BU="; }; - nativeBuildInputs = [ unixtools.column which ]; + postPatch = '' + patchShebangs check_dependencies.sh + ''; - dontBuild = true; + nativeBuildInputs = [ + unixtools.column + which + ]; - preInstall = '' - patchShebangs . - ''; + dontBuild = true; - installFlags = [ "PREFIX=${placeholder "out"}" ]; + installFlags = [ + "PREFIX=${placeholder "out"}" + "SYSCONFDIR=${placeholder "out"}/share" + ]; postInstall = '' # bash completion is already handled by make install diff --git a/pkgs/applications/version-management/git-and-tools/git-remote-hg/default.nix b/pkgs/applications/version-management/git-and-tools/git-remote-hg/default.nix index 69689a49a92..4490f8068e0 100644 --- a/pkgs/applications/version-management/git-and-tools/git-remote-hg/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git-remote-hg/default.nix @@ -4,13 +4,13 @@ python3Packages.buildPythonApplication rec { pname = "git-remote-hg"; - version = "unstable-2020-06-12"; + version = "1.0.2.1"; src = fetchFromGitHub { owner = "mnauw"; repo = "git-remote-hg"; - rev = "28ed63b707919734d230cb13bff7d231dfeee8fc"; - sha256 = "0dw48vbnk7pp0w6fzgl29mq8fyn52pacbya2w14z9c6jfvh5sha1"; + rev = "v${version}"; + sha256 = "1crgq13v2p9wmw1yhckmyzybh8h1nz3839qhqvzh48vxqkailzmn"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/version-management/git-and-tools/pass-git-helper/default.nix b/pkgs/applications/version-management/git-and-tools/pass-git-helper/default.nix index 1821dba0f00..a431a50af3b 100644 --- a/pkgs/applications/version-management/git-and-tools/pass-git-helper/default.nix +++ b/pkgs/applications/version-management/git-and-tools/pass-git-helper/default.nix @@ -2,13 +2,13 @@ buildPythonApplication rec { pname = "pass-git-helper"; - version = "1.1.1"; + version = "1.1.2"; src = fetchFromGitHub { owner = "languitar"; repo = "pass-git-helper"; rev = "v${version}"; - sha256 = "sha256-GdsFPpBdoEaOCmdKxw5xTuFOcGFH94w5q/lV891lCUs="; + sha256 = "sha256-HEdOR6jS16c4UIatlgB6HeBtyyxePSab+6e2hu85dsI="; }; propagatedBuildInputs = [ pyxdg ]; @@ -21,6 +21,6 @@ buildPythonApplication rec { homepage = "https://github.com/languitar/pass-git-helper"; description = "A git credential helper interfacing with pass, the standard unix password manager"; license = licenses.gpl3Plus; - maintainers = with maintainers; [ vanzef ]; + maintainers = with maintainers; [ hmenke vanzef ]; }; } diff --git a/pkgs/applications/version-management/git-and-tools/thicket/default.nix b/pkgs/applications/version-management/git-and-tools/thicket/default.nix index d8420b1cb33..0fd180c441a 100644 --- a/pkgs/applications/version-management/git-and-tools/thicket/default.nix +++ b/pkgs/applications/version-management/git-and-tools/thicket/default.nix @@ -1,10 +1,10 @@ { lib , fetchFromGitHub -, crystal_0_33 +, crystal_1_0 }: let - crystal = crystal_0_33; + crystal = crystal_1_0; in crystal.buildCrystalPackage rec { pname = "thicket"; diff --git a/pkgs/applications/version-management/git-and-tools/thicket/shards.nix b/pkgs/applications/version-management/git-and-tools/thicket/shards.nix index c8839651a26..1c035d332e5 100644 --- a/pkgs/applications/version-management/git-and-tools/thicket/shards.nix +++ b/pkgs/applications/version-management/git-and-tools/thicket/shards.nix @@ -2,7 +2,7 @@ ameba = { owner = "veelenga"; repo = "ameba"; - rev = "v0.10.0"; - sha256 = "1yjxzwdhigsyjn0qp362jkj85qvg4dsyzal00pgr1srnh2xry912"; + rev = "v0.14.3"; + sha256 = "1cfr95xi6hsyxw1wlrh571hc775xhwmssk3k14i8b7dgbwfmm5x1"; }; } diff --git a/pkgs/applications/version-management/github-desktop/default.nix b/pkgs/applications/version-management/github-desktop/default.nix index 650ec73619a..5e8061c157c 100644 --- a/pkgs/applications/version-management/github-desktop/default.nix +++ b/pkgs/applications/version-management/github-desktop/default.nix @@ -19,11 +19,11 @@ stdenv.mkDerivation rec { pname = "github-desktop"; - version = "2.9.0"; + version = "2.9.3"; src = fetchurl { - url = "https://github.com/shiftkey/desktop/releases/download/release-${version}-linux4/GitHubDesktop-linux-${version}-linux4.deb"; - sha256 = "sha256-kyzvvzSCfo6uaTA0Z1yqAUjr4A5p3OuIpaVQv64WW7M"; + url = "https://github.com/shiftkey/desktop/releases/download/release-${version}-linux1/GitHubDesktop-linux-${version}-linux1.deb"; + sha256 = "sha256-e3XDjVQ5VcsS/MGxNsDs2h77joZAz8mNn+SwrqiUAR0="; }; nativeBuildInputs = [ diff --git a/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix b/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix index 9985b7fd0f1..c78a8236bf2 100644 --- a/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix +++ b/pkgs/applications/video/obs-studio/plugins/obs-multi-rtmp.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "obs-multi-rtmp"; - version = "0.2.6.1"; + version = "0.2.7.1"; src = fetchFromGitHub { owner = "sorayuki"; repo = "obs-multi-rtmp"; rev = version; - sha256 = "sha256-ZcvmiE9gbDUHAO36QAIaUdjV14ZfPabD9CW7Ogeqdro="; + sha256 = "sha256-pnSIbAWGufcWIARXpX/zwA/Ff35lrinFaMIdFY00c4Y="; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/applications/video/shotcut/default.nix b/pkgs/applications/video/shotcut/default.nix index 6ea41b4d925..3b6116d5a06 100644 --- a/pkgs/applications/video/shotcut/default.nix +++ b/pkgs/applications/video/shotcut/default.nix @@ -25,13 +25,13 @@ assert lib.versionAtLeast mlt.version "6.24.0"; mkDerivation rec { pname = "shotcut"; - version = "21.03.21"; + version = "21.09.20"; src = fetchFromGitHub { owner = "mltframework"; repo = "shotcut"; rev = "v${version}"; - sha256 = "UdeHbNkJ0U9FeTmpbcU4JxiyIHkrlC8ErhtY6zdCZEk="; + sha256 = "1y46n5gmlayfl46l0vhg5g5dbbc0sg909mxb68sia0clkaas8xrh"; }; nativeBuildInputs = [ pkg-config qmake ]; @@ -57,7 +57,7 @@ mkDerivation rec { ]; prePatch = '' - sed 's_shotcutPath, "melt"_"${mlt}/bin/melt"_' -i src/jobs/meltjob.cpp + sed 's_shotcutPath, "melt[^"]*"_"${mlt}/bin/melt"_' -i src/jobs/meltjob.cpp sed 's_shotcutPath, "ffmpeg"_"${mlt.ffmpeg}/bin/ffmpeg"_' -i src/jobs/ffmpegjob.cpp sed 's_qApp->applicationDirPath(), "ffmpeg"_"${mlt.ffmpeg}/bin/ffmpeg"_' -i src/docks/encodedock.cpp NICE=$(type -P nice) @@ -94,7 +94,7 @@ mkDerivation rec { please use the official build from shotcut.org instead. ''; homepage = "https://shotcut.org"; - license = licenses.gpl3; + license = licenses.gpl3Plus; maintainers = with maintainers; [ goibhniu woffs peti ]; platforms = platforms.linux; }; diff --git a/pkgs/applications/virtualization/crun/default.nix b/pkgs/applications/virtualization/crun/default.nix index cc9d0268179..3175e00f4a9 100644 --- a/pkgs/applications/virtualization/crun/default.nix +++ b/pkgs/applications/virtualization/crun/default.nix @@ -38,13 +38,13 @@ let in stdenv.mkDerivation rec { pname = "crun"; - version = "1.0"; + version = "1.1"; src = fetchFromGitHub { owner = "containers"; repo = pname; rev = version; - sha256 = "sha256-xpNwhNAbcTKkXl5i4L8aayMAx8O8SWdFlgHguHNiqqw="; + sha256 = "sha256-0UyxQ0eOsU3hIh7B56ClynjLFBIsBF+WTqOw4mSqulQ="; fetchSubmodules = true; }; diff --git a/pkgs/applications/virtualization/qemu/default.nix b/pkgs/applications/virtualization/qemu/default.nix index 5bf5f169e47..a00d87f0447 100644 --- a/pkgs/applications/virtualization/qemu/default.nix +++ b/pkgs/applications/virtualization/qemu/default.nix @@ -1,6 +1,6 @@ { lib, stdenv, fetchurl, fetchpatch, python, zlib, pkg-config, glib , perl, pixman, vde2, alsa-lib, texinfo, flex -, bison, lzo, snappy, libaio, gnutls, nettle, curl, ninja, meson +, bison, lzo, snappy, libaio, libtasn1, gnutls, nettle, curl, ninja, meson, sigtool , makeWrapper, autoPatchelfHook , attr, libcap, libcap_ng , CoreServices, Cocoa, Hypervisor, rez, setfile @@ -43,19 +43,20 @@ stdenv.mkDerivation rec { + lib.optionalString xenSupport "-xen" + lib.optionalString hostCpuOnly "-host-cpu-only" + lib.optionalString nixosTestRunner "-for-vm-tests"; - version = "6.0.0"; + version = "6.1.0"; src = fetchurl { url= "https://download.qemu.org/qemu-${version}.tar.xz"; - sha256 = "1f9hz8rf12jm8baa7kda34yl4hyl0xh0c4ap03krfjx23i3img47"; + sha256 = "15iw7982g6vc4jy1l9kk1z9sl5bm1bdbwr74y7nvwjs1nffhig7f"; }; - nativeBuildInputs = [ makeWrapper python python.pkgs.sphinx pkg-config flex bison meson ninja ] + nativeBuildInputs = [ makeWrapper python python.pkgs.sphinx python.pkgs.sphinx_rtd_theme pkg-config flex bison meson ninja ] ++ lib.optionals gtkSupport [ wrapGAppsHook ] - ++ lib.optionals stdenv.isLinux [ autoPatchelfHook ]; + ++ lib.optionals stdenv.isLinux [ autoPatchelfHook ] + ++ lib.optionals stdenv.isDarwin [ sigtool ]; buildInputs = [ zlib glib perl pixman - vde2 texinfo lzo snappy + vde2 texinfo lzo snappy libtasn1 gnutls nettle curl ] ++ lib.optionals ncursesSupport [ ncurses ] @@ -85,23 +86,15 @@ stdenv.mkDerivation rec { patches = [ ./fix-qemu-ga.patch ./9p-ignore-noatime.patch + # Cocoa clipboard support only works on macOS 10.14+ (fetchpatch { - name = "CVE-2021-3545.patch"; - url = "https://gitlab.com/qemu-project/qemu/-/commit/121841b25d72d13f8cad554363138c360f1250ea.patch"; - sha256 = "13dgfd8dmxcalh2nvb68iv0kyv4xxrvpdqdxf1h3bjr4451glag1"; - }) - (fetchpatch { - name = "CVE-2021-3546.patch"; - url = "https://gitlab.com/qemu-project/qemu/-/commit/9f22893adcb02580aee5968f32baa2cd109b3ec2.patch"; - sha256 = "1vkhm9vl671y4cra60b6704339qk1h5dyyb3dfvmvpsvfyh2pm7n"; + url = "https://gitlab.com/qemu-project/qemu/-/commit/7e3e20d89129614f4a7b2451fe321cc6ccca3b76.diff"; + sha256 = "09xz06g57wxbacic617pq9c0qb7nly42gif0raplldn5lw964xl2"; + revert = true; }) ] ++ lib.optional nixosTestRunner ./force-uid0-on-9p.patch ++ lib.optionals stdenv.hostPlatform.isMusl [ (fetchpatch { - url = "https://raw.githubusercontent.com/alpinelinux/aports/2bb133986e8fa90e2e76d53369f03861a87a74ef/main/qemu/xattr_size_max.patch"; - sha256 = "1xfdjs1jlvs99hpf670yianb8c3qz2ars8syzyz8f2c2cp5y4bxb"; - }) - (fetchpatch { url = "https://raw.githubusercontent.com/alpinelinux/aports/2bb133986e8fa90e2e76d53369f03861a87a74ef/main/qemu/musl-F_SHLCK-and-F_EXLCK.patch"; sha256 = "1gm67v41gw6apzgz7jr3zv9z80wvkv0jaxd2w4d16hmipa8bhs0k"; }) @@ -117,13 +110,6 @@ stdenv.mkDerivation rec { sed -i "/install_subdir('run', install_dir: get_option('localstatedir'))/d" \ qga/meson.build - # TODO: On aarch64-darwin, we automatically codesign everything, but qemu - # needs specific entitlements and does its own signing. This codesign - # command fails, but we have no fix at the moment, so this disables it. - # This means `-accel hvf` is broken for now, on aarch64-darwin only. - substituteInPlace meson.build \ - --replace 'if exe_sign' 'if false' - # glibc 2.33 compat fix: if `has_statx = true` is set, `tools/virtiofsd/passthrough_ll.c` will # rely on `stx_mnt_id`[1] which is not part of glibc's `statx`-struct definition. # diff --git a/pkgs/applications/window-managers/fluxbox/default.nix b/pkgs/applications/window-managers/fluxbox/default.nix index 36a22cb46d7..934f8c9b3fc 100644 --- a/pkgs/applications/window-managers/fluxbox/default.nix +++ b/pkgs/applications/window-managers/fluxbox/default.nix @@ -15,6 +15,15 @@ stdenv.mkDerivation rec { sha256 = "1h1f70y40qd225dqx937vzb4k2cz219agm1zvnjxakn5jkz7b37w"; }; + patches = [ + # Upstream fix to build against gcc-11. + (fetchurl { + name = "gcc-11.patch"; + url = "http://git.fluxbox.org/fluxbox.git/patch/?id=22866c4d30f5b289c429c5ca88d800200db4fc4f"; + sha256 = "1x7126rlmzky51lk370fczssgnjs7i6wgfaikfib9pvn4vv945ai"; + }) + ]; + nativeBuildInputs = [ pkg-config ]; buildInputs = [ freetype fribidi libXext libXft libXpm libXrandr libXrender xorgproto libXinerama imlib2 ]; diff --git a/pkgs/applications/window-managers/river/default.nix b/pkgs/applications/window-managers/river/default.nix index 5c809097ee1..24acb2664e5 100644 --- a/pkgs/applications/window-managers/river/default.nix +++ b/pkgs/applications/window-managers/river/default.nix @@ -19,13 +19,13 @@ stdenv.mkDerivation rec { pname = "river"; - version = "unstable-2021-08-03"; + version = "unstable-2021-08-19"; src = fetchFromGitHub { owner = "ifreund"; repo = pname; - rev = "2fc0875a3e17a0328d14d0c6323bd8022d5b15de"; - sha256 = "sha256-Cs9RRubxy0DY6ILRZY36HtcoqBvzbN7NEfpREq1KBBQ="; + rev = "e59c2a73d72853cb54f55eecc446f337c94cda24"; + sha256 = "sha256-R/Wg8KLh4v3ccX1Uh0Q+7026tRH7XLxHpX9/BgsGGdA="; fetchSubmodules = true; }; diff --git a/pkgs/build-support/docker/default.nix b/pkgs/build-support/docker/default.nix index 4bda4d2a5c2..47fd99c12f8 100644 --- a/pkgs/build-support/docker/default.nix +++ b/pkgs/build-support/docker/default.nix @@ -191,13 +191,13 @@ rec { , postMount ? "" , postUmount ? "" }: - let - result = vmTools.runInLinuxVM ( + vmTools.runInLinuxVM ( runCommand name { preVM = vmTools.createEmptyImage { size = diskSize; fullName = "docker-run-disk"; + destination = "./image"; }; inherit fromImage fromImageName fromImageTag; @@ -278,12 +278,6 @@ rec { ${postUmount} ''); - in - runCommand name { } '' - mkdir -p $out - cd ${result} - cp layer.tar json VERSION $out - ''; exportImage = { name ? fromImage.name, fromImage, fromImageName ? null, fromImageTag ? null, diskSize ? 1024 }: runWithOverlay { @@ -291,7 +285,13 @@ rec { postMount = '' echo "Packing raw image..." - tar -C mnt --hard-dereference --sort=name --mtime="@$SOURCE_DATE_EPOCH" -cf $out . + tar -C mnt --hard-dereference --sort=name --mtime="@$SOURCE_DATE_EPOCH" -cf $out/layer.tar . + ''; + + postUmount = '' + mv $out/layer.tar . + rm -rf $out + mv layer.tar $out ''; }; diff --git a/pkgs/build-support/docker/examples.nix b/pkgs/build-support/docker/examples.nix index c66aca56fea..9f6823a5878 100644 --- a/pkgs/build-support/docker/examples.nix +++ b/pkgs/build-support/docker/examples.nix @@ -95,6 +95,15 @@ rec { finalImageTag = "2.2.1"; finalImageName = "nix"; }; + # Same example, but re-fetches every time the fetcher implementation changes. + # NOTE: Only use this for testing, or you'd be wasting a lot of time, network and space. + testNixFromDockerHub = pkgs.invalidateFetcherByDrvHash pullImage { + imageName = "nixos/nix"; + imageDigest = "sha256:85299d86263a3059cf19f419f9d286cc9f06d3c13146a8ebbb21b3437f598357"; + sha256 = "19fw0n3wmddahzr20mhdqv6jkjn1kanh6n2mrr08ai53dr8ph5n7"; + finalImageTag = "2.2.1"; + finalImageName = "nix"; + }; # 5. example of multiple contents, emacs and vi happily coexisting editors = buildImage { @@ -541,4 +550,7 @@ rec { config.Cmd = [ "hello" ]; includeStorePaths = false; }; + + # Example export of the bash image + exportBash = pkgs.dockerTools.exportImage { fromImage = bash; }; } diff --git a/pkgs/build-support/fetchfirefoxaddon/tests.nix b/pkgs/build-support/fetchfirefoxaddon/tests.nix new file mode 100644 index 00000000000..d125be196af --- /dev/null +++ b/pkgs/build-support/fetchfirefoxaddon/tests.nix @@ -0,0 +1,10 @@ +{ invalidateFetcherByDrvHash, fetchFirefoxAddon, ... }: + +{ + simple = invalidateFetcherByDrvHash fetchFirefoxAddon { + name = "image-search-options"; + # Chosen because its only 147KB + url = "https://addons.mozilla.org/firefox/downloads/file/3059971/image_search_options-3.0.12-fx.xpi"; + sha256 = "sha256-H73YWX/DKxvhEwKpWOo7orAQ7c/rQywpljeyxYxv0Gg="; + }; +} diff --git a/pkgs/build-support/skaware/build-skaware-package.nix b/pkgs/build-support/skaware/build-skaware-package.nix index d6f26fe908a..50d83f2ffff 100644 --- a/pkgs/build-support/skaware/build-skaware-package.nix +++ b/pkgs/build-support/skaware/build-skaware-package.nix @@ -22,7 +22,8 @@ , postInstall # : list Maintainer , maintainers ? [] - + # : passtrhu arguments (e.g. tests) +, passthru ? {} }: @@ -49,6 +50,8 @@ let "CHANGELOG" "README" "README.*" + "DCO" + "CONTRIBUTING" ]; in stdenv.mkDerivation { @@ -106,4 +109,6 @@ in stdenv.mkDerivation { [ pmahoney Profpatsch qyliss ] ++ maintainers; }; + inherit passthru; + } diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix index 1a07e1c1159..c501f63ef00 100644 --- a/pkgs/build-support/vm/default.nix +++ b/pkgs/build-support/vm/default.nix @@ -9,9 +9,9 @@ }: with pkgs; -with import ../../../nixos/lib/qemu-flags.nix { inherit pkgs; }; rec { + qemu-common = import ../../../nixos/lib/qemu-common.nix { inherit lib pkgs; }; qemu = buildPackages.qemu_kvm; @@ -192,13 +192,13 @@ rec { export PATH=/bin:/usr/bin:${coreutils}/bin echo "Starting interactive shell..." echo "(To run the original builder: \$origBuilder \$origArgs)" - exec ${busybox}/bin/setsid ${bashInteractive}/bin/bash < /dev/${qemuSerialDevice} &> /dev/${qemuSerialDevice} + exec ${busybox}/bin/setsid ${bashInteractive}/bin/bash < /dev/${qemu-common.qemuSerialDevice} &> /dev/${qemu-common.qemuSerialDevice} fi ''; qemuCommandLinux = '' - ${qemuBinary qemu} \ + ${qemu-common.qemuBinary qemu} \ -nographic -no-reboot \ -device virtio-rng-pci \ -virtfs local,path=${storeDir},security_model=none,mount_tag=store \ @@ -206,7 +206,7 @@ rec { ''${diskImage:+-drive file=$diskImage,if=virtio,cache=unsafe,werror=report} \ -kernel ${kernel}/${img} \ -initrd ${initrd}/initrd \ - -append "console=${qemuSerialDevice} panic=1 command=${stage2Init} out=$out mountDisk=$mountDisk loglevel=4" \ + -append "console=${qemu-common.qemuSerialDevice} panic=1 command=${stage2Init} out=$out mountDisk=$mountDisk loglevel=4" \ $QEMU_OPTS ''; @@ -257,14 +257,23 @@ rec { eval "$postVM" ''; - - createEmptyImage = {size, fullName}: '' - mkdir $out - diskImage=$out/disk-image.qcow2 + /* + A bash script fragment that produces a disk image at `destination`. + */ + createEmptyImage = { + # Disk image size in MiB + size, + # Name that will be written to ${destination}/nix-support/full-name + fullName, + # Where to write the image files, defaulting to $out + destination ? "$out" + }: '' + mkdir -p ${destination} + diskImage=${destination}/disk-image.qcow2 ${qemu}/bin/qemu-img create -f qcow2 $diskImage "${toString size}M" - mkdir $out/nix-support - echo "${fullName}" > $out/nix-support/full-name + mkdir ${destination}/nix-support + echo "${fullName}" > ${destination}/nix-support/full-name ''; diff --git a/pkgs/data/fonts/iosevka/bin.nix b/pkgs/data/fonts/iosevka/bin.nix index ced17e2cc8e..08c4a1b145e 100644 --- a/pkgs/data/fonts/iosevka/bin.nix +++ b/pkgs/data/fonts/iosevka/bin.nix @@ -11,7 +11,7 @@ let (builtins.attrNames (builtins.removeAttrs variantHashes [ "iosevka" ])); in stdenv.mkDerivation rec { pname = "${name}-bin"; - version = "10.0.0"; + version = "10.1.0"; src = fetchurl { url = "https://github.com/be5invis/Iosevka/releases/download/v${version}/ttc-${name}-${version}.zip"; diff --git a/pkgs/data/fonts/iosevka/variants.nix b/pkgs/data/fonts/iosevka/variants.nix index ce96f183375..0ce5212b131 100644 --- a/pkgs/data/fonts/iosevka/variants.nix +++ b/pkgs/data/fonts/iosevka/variants.nix @@ -1,95 +1,95 @@ # This file was autogenerated. DO NOT EDIT! { - iosevka = "1730pcbxkcyzfw22hgqsv45sybd79pdsm7vb4l2gm9pfzasypjra"; - iosevka-aile = "1nm0s8zhmg5v181rik4d4nsygxrvfr9wdjwqz6gfl2dmg17r7cyi"; - iosevka-curly = "0kmvj1zhf0xs02rdf2x1f3lnahj36dpc91p6k4mbji5mn9klb547"; - iosevka-curly-slab = "0zklkypyh303gi5gqpdkwmj3g9m1f1xqda3ah232c3d6cfznbyqc"; - iosevka-etoile = "1nj0p25pbjkzc1lg8fp45zxj6r3q4k5yc882rra3jkjmlw2h65b7"; - iosevka-slab = "1vz9443swmxb27iqmimjyg3zs6q0pw7fpwiiaa7k1s7gc5xkyb5s"; - iosevka-ss01 = "1g2xxl9x5apyhhm7lsbmplh19c5aln3jwryzqvrqxpnsngkqmp0h"; - iosevka-ss02 = "1d2b8syvdx8i1dqw9k87yirkyg3wdvr7y2hy5c3nzj62sg7drfla"; - iosevka-ss03 = "0b4y1v6kri4d56h6m58qqmc50bh4r4151h72n1a2q0a0nwkgvlwm"; - iosevka-ss04 = "0fj7rj9xy9sfrzdhjqzv37v34lmkajz4d497i7lvdc2i0w4ia4gf"; - iosevka-ss05 = "0xncnrf8d78iqf3731z0midw4rlza8hdji0m3gvxnigbq3cqxhwd"; - iosevka-ss06 = "15vclj2m5brp1fnw82w5b53cwlwzzsr5hzxm6j2bj9bghc75cigm"; - iosevka-ss07 = "1hs7c5n5pcgmspwrhdxv69dc0wdycfcdfs1mxwbamnal77c9q0s8"; - iosevka-ss08 = "00fz1yb0g1rlzw3pxfpi88vh03k1q9nkzi8h6naqv0hngcbsz1ia"; - iosevka-ss09 = "1ig5lqpk86z7mwr45gqvsdxs00g7b0mvx1i8q8hx5x4pyr36y7yh"; - iosevka-ss10 = "12c50mh3xggz03lqqrkdcmdfvfq3m87x8xb9x0h8lwfslqaa0c0x"; - iosevka-ss11 = "1qvdsfviif8wyms0bkzm7vx0gf8vx5gic3ghincv4ignx8hmrbm9"; - iosevka-ss12 = "17qxrpmbrandlibhshycsgjlwspx7gz0x6mzhy1n8ccycrd7qlii"; - iosevka-ss13 = "07nz5wf99j6m72vkrnbhpr4yhn3pdgb898dinzi4n5k0rmky03zb"; - iosevka-ss14 = "1h9icwqz4qdzm99j17qxmrv1jvm3dzqrcghsffva9yvr32anc5y6"; - iosevka-ss15 = "06362h12vy48ib338dw7vjxx6vqpfzcc47f54f23pp1b73ygrkxp"; - iosevka-ss16 = "1sbby53vmjaq8h09a2izf4w5nha5knpgb0ljfyfd1wj1nnkdbisp"; - iosevka-ss17 = "13l3dindp0x76c3ddx7ibjins65f6xpv8zy7dfjyil8kg2570lfq"; - iosevka-ss18 = "1z0ypy19cj2hlg8qhvg0a54p0704f8szljf0lrrajprc8ws4cqy0"; - sgr-iosevka = "0cl08cxidpvrjy2ifhjb4cgrcjsldv86ipx4i8wh2kvs632hkz42"; - sgr-iosevka-aile = "01a7glrzrifwbfh05jynhmjd78cck4hw8aik3qf8pjr0lmyn8inz"; - sgr-iosevka-curly = "1wl80fn6zk1dvhqnfwxc74i2f925yf362s45d1bshi3n2qd7ixv4"; - sgr-iosevka-curly-slab = "18vvhkqhljnpv75v7cbw5z3d4xc418g0pgh39zyy1sdpq01h6ycj"; - sgr-iosevka-etoile = "0g7brirxpb2s0a94vc00jk8d45wafcimkd1dkilhpc5h862d7y3d"; - sgr-iosevka-fixed = "17g81448bjms88xph2h8cjfz2z2bhy4dc5ialy583zw9hafk0b6k"; - sgr-iosevka-fixed-curly = "18kfz4bdp81ylwjikdyj00m58bb5ykaxnxv288d9qr9r0wav14bf"; - sgr-iosevka-fixed-curly-slab = "1r1223m547ddpjrc0dpzkmkbw4851lvkc2g37yzd97i7g3da0q5g"; - sgr-iosevka-fixed-slab = "006d1cznz5ikclpz6kli69h5jnsr50yd08za3m6k07npnj4g9i9h"; - sgr-iosevka-fixed-ss01 = "0dxjmxvhq7dba7f4dcw2z85mgbx4qmy3w1nz99kbn729pjv3xbnr"; - sgr-iosevka-fixed-ss02 = "1ljq7dxj7dfg8bwmljykbl0lgkw4q9v5h41mflrvxhxkgblghji9"; - sgr-iosevka-fixed-ss03 = "14q5wi4af1mnm6g895zgpmf1qcnadv0mpiyydcizayqxnc015xr0"; - sgr-iosevka-fixed-ss04 = "0szy07dlv9ag7jqahlgyi9wgwpas73rg2vw74jg63fx06svwyx7z"; - sgr-iosevka-fixed-ss05 = "1bm6mqal8jni9za27dmbq9pdqs9j3x58w0cnzx7ma3gyaypfi5jc"; - sgr-iosevka-fixed-ss06 = "08a6mzrbx7wl4z147kv3289fbaccd7cs0r1gp3dnkkypsy4cw907"; - sgr-iosevka-fixed-ss07 = "05l0i4mblgx2zqfp5qvpwqp9671mkfj60i4pg0kznwd13j0ya8qs"; - sgr-iosevka-fixed-ss08 = "15ils79jpa1kibyh3ih5dkjk0qi0ppsy9iibyyl301c4vyhgypzb"; - sgr-iosevka-fixed-ss09 = "1s2m349m7560zz10r0w0nmgixxzn0ys4j8jwy3c1zxzphdq60a10"; - sgr-iosevka-fixed-ss10 = "1iby1afylism23cn70x0bb2qi8mdkf0ysgnmagdr47cgh6n8kgmy"; - sgr-iosevka-fixed-ss11 = "10zn26ijrdj2s0fzc1d1kyi0rpy6qw1bbp6qwf1x1mbhapj0mc8a"; - sgr-iosevka-fixed-ss12 = "1vdxn5qr1h192c1czxifvr4f2mv1jhkb20m5n3wgawyf75p7blcy"; - sgr-iosevka-fixed-ss13 = "1fdki2kf6xy2mvxnna1m77xgk5hm88i1g5ds8dzr6gc5mkm5mw8m"; - sgr-iosevka-fixed-ss14 = "1gaycm1zzm2qnriy76xnyy74rk9ccs54q71br2m55jlr4ifglanv"; - sgr-iosevka-fixed-ss15 = "07b9ss5a2vk4gndwc6zw8qwa4wgsrfnfq9cbrx9zlzj08143q9dr"; - sgr-iosevka-fixed-ss16 = "156yh0hbqqklhpf7czblk43nmq3cw0akgiy4z7jq0904b96v68zs"; - sgr-iosevka-fixed-ss17 = "0wj8j09wvf7m7m1ss47bqf6s0nvrn3vlzdhgnmzwc2jc4rkrvjpa"; - sgr-iosevka-fixed-ss18 = "0zsy2ql3r0419h6ganfdfhmwzn7lprypw26bq7iqzvld03vss45c"; - sgr-iosevka-slab = "10al24w3lglgdz9v86yx6q58mx4qyrxr8kffl0qvjiqvdcyyp460"; - sgr-iosevka-ss01 = "0ipwpjwg14wijzx0qb0zni8rzvw6wwfbwzqv8pzf2dmm6iwnmnqc"; - sgr-iosevka-ss02 = "0nfbw5smfarglma3cddzw397rjh72qjxqhz3g28l0sj26gk2bwma"; - sgr-iosevka-ss03 = "0cdvb5igir3c216niq3i0hbjvff1y9bnzf6fwny17303vjvfqg41"; - sgr-iosevka-ss04 = "0sj62id2ljwsms8xv17j474pdr881r6z8kb7a26gv48p08r225fq"; - sgr-iosevka-ss05 = "13pxfc2s2vxxkqp4jvzam6bx7ywn350phs5xhlzmcdk4sjgml9i2"; - sgr-iosevka-ss06 = "0xscng0a90vlr621pnl3hxpn2la862rgcx7xy8d1i6k47wpp1zbj"; - sgr-iosevka-ss07 = "0yj11jc8fzw9l2316y90mdj7hsqd46y5i1rckxlvih5nv300x1cp"; - sgr-iosevka-ss08 = "15jn1xjafawd5b4y2z4fkbaf22fgbvc861m3sjx4hib5vqjn41p3"; - sgr-iosevka-ss09 = "0kffxk8kr5giisfc10a5h889azgkqs4q9f0gggv8xlml4afdycd0"; - sgr-iosevka-ss10 = "1ldwpx2ysx0v79qfzhcqcc2cwylwnr6x81fy2yqqnv2319v1xrky"; - sgr-iosevka-ss11 = "1rd98yvky9wxgxcp4ps9p1k4ll8hnh9g9vgwf1r0bjlykhv7dhmf"; - sgr-iosevka-ss12 = "0439fg1pvxnv96v77rzrn0sbzna962ixgn8bx4ykpx0wkrigmyrk"; - sgr-iosevka-ss13 = "0qzbf4milkijhmxfkv3al2w5s2aa0a0aqqqxbv2wgza7g3i2glgv"; - sgr-iosevka-ss14 = "0vk8s71lyrdgngdbaasimdg0a5ygckciy7wxkkbixvxh18vi3mfr"; - sgr-iosevka-ss15 = "0c5sai8zbciwpkwrfliakf8091n5zcj7bilkbhzljpgfhalxg43v"; - sgr-iosevka-ss16 = "0a8q3ns3chw6kg77fxc03njlbr4slnq83381lwznhnsziyk7jb6r"; - sgr-iosevka-ss17 = "0bbfq7fjbr718fnmfy4nl7m9n7sjnra89chig9am7571ws66wbxc"; - sgr-iosevka-ss18 = "16sj1g5i75hfd07ghsm6zb655mypgwagxzpz5sk22dkrilxwrdix"; - sgr-iosevka-term = "1ncr05mprm8bar8v9saqsklgm36mymzhzw5x1viz04757s89cqnc"; - sgr-iosevka-term-curly = "0vwi4ccz0fnd7a3adfxffar5qxfzkx4pz23208kzc5zjidl9s9ka"; - sgr-iosevka-term-curly-slab = "0dwjcj8d4am5kqw35w68hm3qnxyk9w5k44z2n1mf9gsj411layi8"; - sgr-iosevka-term-slab = "1i7gp1lirdzzcmcv5lcrdf2mb2l9v3kjx1yhhdydfpapq85q5wma"; - sgr-iosevka-term-ss01 = "0zjx0r7sznzdw1diy88p6bkdki0ihqilvksil6qccbg4fn9f2swm"; - sgr-iosevka-term-ss02 = "1ma8366h42n5ij2czhkhmfyzmv23hmn165ihjxmwkxhg0c58l4jl"; - sgr-iosevka-term-ss03 = "0n23fy0ks0pid1m8z5vl9j7g607nl70h7bxfn015lryl7v8yj2dm"; - sgr-iosevka-term-ss04 = "1a7llxzf4cs9jr7ldnhxdc7r2jviaffq2kvhkj3spqan9bk6ymcx"; - sgr-iosevka-term-ss05 = "1d3sp99f6gycbmxk6z0raa7gk0is0m7bc7dqb4dy6zikra35kv4x"; - sgr-iosevka-term-ss06 = "1vjc785rzzrcbdbcp5j2dljk9flv9inmcjswyf7fyacn4ghszap6"; - sgr-iosevka-term-ss07 = "03pjbr7bp1av2pav1x913j1h18b4nhxvr7k62dg68b019rj1pvfg"; - sgr-iosevka-term-ss08 = "1b9qvkb4zpvwfygvh7i6b6dcwk8jk0y1kg078ma4vlpfag9ay4xb"; - sgr-iosevka-term-ss09 = "0zcg1b1j7113qp5q81s5dx34n1h3lmrshrx8xkvy6kn1n48b17b8"; - sgr-iosevka-term-ss10 = "1nrciywy8fr8x716w087pyyw0vkyd60j3lmxc7ixsr9yl3ff9bb0"; - sgr-iosevka-term-ss11 = "1k4xsl9x6195ap2zg0xxrla4svvzxhwas6xf0dbh7k2baiwyknb3"; - sgr-iosevka-term-ss12 = "16h0i0vj98l0l6hfyjsq4qy8mxkz5p8xpqxnpd56wxm7mnl2b7i9"; - sgr-iosevka-term-ss13 = "1i907injbdamdyfd1ydzdjsygn0b3syab0ahas7xmd438rfkcfj6"; - sgr-iosevka-term-ss14 = "1ypx059ws3pdhkn6lsc4cai4qhm8gzm9chmrsiqk2978yaf2z06c"; - sgr-iosevka-term-ss15 = "1nqbslx44ikj4wd3h1ycqsbk6sk72zz2n49pkn9r3khp9wwz7qwn"; - sgr-iosevka-term-ss16 = "1lpmph22gqzn3zf9zsr5hzb59573xkiz7yq9pfqg5bxnx248byr9"; - sgr-iosevka-term-ss17 = "02d3vs46cg4nbak1y64cw5jlhzgxmlxxkhlz3jzf5wzzb9kli4iv"; - sgr-iosevka-term-ss18 = "1z580s3icbzpivp766cqdc3j8ijgpp5f2yz9a4g4hpz3isa1lpy6"; + iosevka = "09fwk1sm2i0yf2qvwc99g46jhhi9jwmxrqm02m9n348gcsvml7k1"; + iosevka-aile = "07nykjvm5acnxc585y7qfs38d1mm4x654wykq24cwd0qdialz2yn"; + iosevka-curly = "1v9v5xhv4pdihb2q1hgzlw3z54vpg9lvjf753z95x97ah246kbyc"; + iosevka-curly-slab = "0av94y57pi9vy8skb96dbvlcbz7j6hz7cvhsrdpx50nbf9x2ya4b"; + iosevka-etoile = "0vinmfcxs16rx1i86sl7ig7hwwyfwv49vh12k6yx9gx56jyywj51"; + iosevka-slab = "18sjdj5gdg993a0mzvx43l3ll7q2l8w30j12934nlzlw5cadv8gf"; + iosevka-ss01 = "1k08nwzgdz78iiijd6bzfricjbwa23xmzjm6jq72q7cvcqrwpzfj"; + iosevka-ss02 = "139q7ps9y97qzmyqr45xqphw5szr4a119pm1jnwrc5scplnhiisb"; + iosevka-ss03 = "1rbsvrc11skznnk448nj0brfvj58zhgkczlq7skhb8rc3mznhgb8"; + iosevka-ss04 = "0rr7zy9n84lqxj7h0ljd091m8a5yjs0kzpyp3j68mvccsdwncqq4"; + iosevka-ss05 = "035rv0pq7741n6c7zkajjzis2rkdyb75z9zjzyiiylfx19j6d6a7"; + iosevka-ss06 = "0bvbl36zpk79f3h7svs51l0wbllmnnkgxmdk76ikfg4a490nz4g9"; + iosevka-ss07 = "061xngjvznr6syk1y996fmnjqpj0kvnnibibr46lgqcx5xb1w38x"; + iosevka-ss08 = "0szc3iydg3kkg6v42ym52b7nd6ljfwrfcw7n3j1av9vhf5gmn0rv"; + iosevka-ss09 = "1p0hsl6vihly2drh6yiniijcwvwjz35d34d6jfxavjhx028h92mw"; + iosevka-ss10 = "152asnmd7m7q1hligkv4ar8h71xn96586p9whplvmkgfrcr731p7"; + iosevka-ss11 = "0mf3gg1b9x3i1j8c3yqks7sc56j97fwx736pr01bf99lw4jchd2h"; + iosevka-ss12 = "136s3i5dwz0iv8mivq8fraadhbqzjjc5h2c5wqydvmw9i7rpyp2h"; + iosevka-ss13 = "0n9886kn9sr89rwnc0r0q9d2a16fykq5asd0cazrs95jbqq0acix"; + iosevka-ss14 = "128y8dgsawdz20lyjshdl7932222dph6qyiirim6rkh99bp2kdy6"; + iosevka-ss15 = "0h2ywzn2gmaj61n5gzdms7v3yqa3x474icdg10vqds7i86n6g8am"; + iosevka-ss16 = "1c1sr4lphwf8x5xdagciws8dr7ia8jh2cy3zv787g8dhflhzvc1i"; + iosevka-ss17 = "1gqbwx89hcnky7bi1xscz13ykh4srvycbfgf9z4b5j26wflfk2a9"; + iosevka-ss18 = "07h0zcf789g6qw5laznf5y67syh003lwhr6141ifz2zv2sgjl716"; + sgr-iosevka = "0h9yg63cjc0s4kbl5k9lpic48y5iz0hlm8bi7h2h850zhbj405fm"; + sgr-iosevka-aile = "1sv0lb2xb18skwvvw95qzdi9hqr1mr3gi2p4plqlbxq6bjpcvc57"; + sgr-iosevka-curly = "1irg71zrbqnw1r2ar5qkfzdjzb1ziwd22jyvm9g1gynjiwh1idaj"; + sgr-iosevka-curly-slab = "12lc9gqlbnp4crp9qrqf38dlzwaqanyj3l9xyasd96z33wmgnvcr"; + sgr-iosevka-etoile = "0j78cbrdsz9qnvs6y6vkv1ys2spfv9l207z20zkyw5m0i3yvhwi4"; + sgr-iosevka-fixed = "04lirldlmjlvz8q33xb2886d1jqaj1a7a94mnrm1ikw2gzbh7j1m"; + sgr-iosevka-fixed-curly = "1s4xyzlmg9s8jvpvc22bxqc6z9qn0bbgham9kp1w2nwlmlnhl712"; + sgr-iosevka-fixed-curly-slab = "01g6rk0n1xs0bv4vyqv9pwyndzk9k8cfhf0sd640zdkqi51p4raw"; + sgr-iosevka-fixed-slab = "1ipzwxs0jqk4cc8snyy9mxhak1zrj9qlicwwhhhv8pmxs2lcirgq"; + sgr-iosevka-fixed-ss01 = "1vpfgj496yzn5n8zb5hxzlx0kh0yfh27v2naz4zi4gci0k58mj4g"; + sgr-iosevka-fixed-ss02 = "122id78h9lvnm4abflng5572zjdn52wqci9jq88gh5iyk02kja6b"; + sgr-iosevka-fixed-ss03 = "0wa4q1zqp75ja5m34wy3zmx5in225ldr0ah23y7l9kh3x67lfykd"; + sgr-iosevka-fixed-ss04 = "11dxlc3r1gn3psf4bpsiwr283zjpc63d8fgswwbh5d6swk9nxm7v"; + sgr-iosevka-fixed-ss05 = "0jw57byz8rbdc5h1ig5d4kpjklqrm6880sx0z06gw97z3p4aqmb1"; + sgr-iosevka-fixed-ss06 = "0saxvswnrszi3kirv5j1pp96n9fhnqwrmsc8naqdgq342rcy13w5"; + sgr-iosevka-fixed-ss07 = "0bsrpfbcjf2g8vd6f6sv6yxvdi9s6wdjckbjb3m64mdgv25lpdwv"; + sgr-iosevka-fixed-ss08 = "1l5k2y0h4h3fsk2ac7akym4rash6bb63bj9vhh3f9igq062dk10a"; + sgr-iosevka-fixed-ss09 = "09s1x6q7lx4y0462m0ac3jp8jfy4x2sc2irfmxcz2rl5px2smgdg"; + sgr-iosevka-fixed-ss10 = "0j8h200gw60rzknxyg7nvcg9cw1nhvgy3n6n70lf3b8jnp5splzd"; + sgr-iosevka-fixed-ss11 = "0cgxy8gq5wak1a7z3j013l1kadph45ckl865dlkw5jnmndz7a684"; + sgr-iosevka-fixed-ss12 = "1y9grhh3ami6qwdm8a6r7m671n7c9bnxp7qgmk7qxgb8jax31qcp"; + sgr-iosevka-fixed-ss13 = "1a9in4ybl9vjyvxab0hdbjnq46rg3yx9gyalj6x8y3mxsfij0wh2"; + sgr-iosevka-fixed-ss14 = "0wc3yw6rf05wdh8kzz6af1apirvyspkb8bav4pbdxahsy1asij58"; + sgr-iosevka-fixed-ss15 = "1b7ns68lx267y9rwlv47yl0y48nvwyzqdpgpwdfwkmpl6vd9kmnn"; + sgr-iosevka-fixed-ss16 = "07h4zvcll7324r4l7kwwk13874hmjs7vdiiffbjwhi403vbiw1an"; + sgr-iosevka-fixed-ss17 = "1rjb0c3yvww8n3sam49ynj2f7h0xgbdsznk7xbj4sk5pkx3l5zr5"; + sgr-iosevka-fixed-ss18 = "0s39p9khjidasizg1ps3k87ldlkpy3cxy5l6r0c2bkvnfz63k66n"; + sgr-iosevka-slab = "10gx0hlr2iywj3nksc70idjha9wja3fw9fl8yvkmnpbqaxlrlzm8"; + sgr-iosevka-ss01 = "1fzxzx9ky4zrbv3zbjh7c57k8dm949xz356a4jk1lpbmwyd0gry4"; + sgr-iosevka-ss02 = "1qk9f257pq2r4jfilrh02viwgy80kqga4czpc1mvwwbqfalz2lg9"; + sgr-iosevka-ss03 = "0cj2xgpfcxdj4sh2sdp6cvbg08s6c8gvg0h01ylrqnazxddfv1xr"; + sgr-iosevka-ss04 = "02q2xqv1qvdijn53p3nbz2swn39yk2pp5ndq1wkakm5j3w5n52f9"; + sgr-iosevka-ss05 = "0y4f8zkzvxq512ns4qzbq5hnd6zzwdjlc1p2iify0f4m491msx5n"; + sgr-iosevka-ss06 = "154jzvb44h1njzkzsk9x6mk7g9sa5jr7kqjv26ylm0ax0i039ax2"; + sgr-iosevka-ss07 = "08025i39hkinrd0sq0yj3d9dc3fqhv5qfdvxaqg3wp89p5jz2q2q"; + sgr-iosevka-ss08 = "1hj80l9k1qi4cnw5dqfp431z3yiyqvrhby9f4ny84ppkpihp60xk"; + sgr-iosevka-ss09 = "0pl1fz70nx0ls0l4zr8j111flf2mh54miavb0422r2dzprvqaviq"; + sgr-iosevka-ss10 = "1wb03i26g36n6qgzkyza3sbdbgpari5sw0m4qm7yaz3c2f91ic69"; + sgr-iosevka-ss11 = "1mz1mg0pc3nidsl5pb6kvdmmga62fj8x77x0n1xjzcz2iwvdd616"; + sgr-iosevka-ss12 = "0g3i88rhax9am4nfjzq91kdkj1k6vzszia7g79hzsw8nfyrd1i52"; + sgr-iosevka-ss13 = "1jcg4y52xbig8npjd7jbjxqdr9nsbwh120mh9sjy9vvq3hxdsbqh"; + sgr-iosevka-ss14 = "1am7j9ymxgmyb50qziyd3xkal1f82cnx4m21gd2rqxijpa12x1r3"; + sgr-iosevka-ss15 = "0zpwz51xdbckldgycgbmrqf3g9wssanmb2z554n1vbmc5whhwkpp"; + sgr-iosevka-ss16 = "19jzkq3xj0cncs4mk11z8q8mmf6h75i0x2nj4ikcvk01mlrss6s8"; + sgr-iosevka-ss17 = "1zn0xh0h997afjsj6n97bmxanxk441iw6mcdliavfs9l6lj1zhns"; + sgr-iosevka-ss18 = "147w89y3p9s2qanm4wwxv3plpif50fs85hzhhdz23jin5zvh5lz2"; + sgr-iosevka-term = "01aqqniw3r2njv4fc114iymjzp9k5mdl7c5dyxypm71sdlpcjxqj"; + sgr-iosevka-term-curly = "0rh0k1svfsan04q50ihhf2xf2fa8isggpqmfps77q1xrbih9miyc"; + sgr-iosevka-term-curly-slab = "0ys2apprdz1awf6nad6phv2k2kf0qfigb22j930y1gya9vshxqx1"; + sgr-iosevka-term-slab = "0qbiwsllyim81ayh0whrkzc1nq06x9g7hnv8haxh91jg9nf327vw"; + sgr-iosevka-term-ss01 = "0mdgh9hdnz752d7sxv91ayi6lyp6czs6gq21dqigk3wmkgwaraz2"; + sgr-iosevka-term-ss02 = "0zxynyzbngng6ymajd7yf5pmagdzxnr19vnpbmqkvhjnsjmhqpcd"; + sgr-iosevka-term-ss03 = "192fjh0kc8jh0z8y7l74g41jvqfnax5p2shnn0ch1h824vraklvd"; + sgr-iosevka-term-ss04 = "0fjmy0wl8hh38gbhf5h6m064la1dp68lyfimmxvjpf1s2c3g5szd"; + sgr-iosevka-term-ss05 = "0w57k1kjn91srngy297fywi1wnc64bwyymclk0w704sqpx04jv4n"; + sgr-iosevka-term-ss06 = "0n2ifw444z606qm9w4il6inmf5zmbkhrk2wvldfx5bsgv2pfxnjd"; + sgr-iosevka-term-ss07 = "1wwky8pichvr467ypgxrxyfqgr27hqkpmx7c35fzka9c0kap483q"; + sgr-iosevka-term-ss08 = "117c54z898rmsclm23hn4x2wvhypc2vmncrq2mvkqck0wawkwaxw"; + sgr-iosevka-term-ss09 = "0lahhifnar8f716xq63xjhibay7cfqgaa7drxvz4pqxmzijv6r2r"; + sgr-iosevka-term-ss10 = "0fp149a4dn7wgdsms70k162g60jgdg5ric93rhxnkn83x3d5jam1"; + sgr-iosevka-term-ss11 = "16pvy63b194vig5vxy15ylmyl5422vrj9adqqwl82r0l9aqpkqlw"; + sgr-iosevka-term-ss12 = "1gldv3srnm7zx9gkyizi6gvf34b7z7xg17qk77882jczsv95hyh1"; + sgr-iosevka-term-ss13 = "0aznbica0yc4vhp4bp84dflfd6jhzw8lsakknfn8dz10kj1qq7vc"; + sgr-iosevka-term-ss14 = "0x73vwywxj7j6qg3armbhm6rjy308j1rk1fhjfriv51hnkm6ylz2"; + sgr-iosevka-term-ss15 = "0px9y25bx75ppsdaq0rfddd9ljxwa3fv5296kvvkw3mwd0ralflx"; + sgr-iosevka-term-ss16 = "1bmnf7z8v4mbcq97lj2qkf722ww1n500jgv2zgs36vxc22zjjrvk"; + sgr-iosevka-term-ss17 = "0lp5qz8j9xc8n959lm4sbfkjhm3ib79qnv69a57nkv5a10ddk20r"; + sgr-iosevka-term-ss18 = "0jkp6zjx9ih5m4pa95a2rn7j1wx4hvnxg2j24cib9dixr7sc81b6"; } diff --git a/pkgs/data/fonts/ocr-a/default.nix b/pkgs/data/fonts/ocr-a/default.nix new file mode 100644 index 00000000000..216b960994d --- /dev/null +++ b/pkgs/data/fonts/ocr-a/default.nix @@ -0,0 +1,24 @@ +{ lib, stdenv, fetchurl }: + +stdenv.mkDerivation rec { + pname = "OCR-A"; + version = "1.0"; + + src = fetchurl { + url = "mirror://sourceforge/ocr-a-font/OCR-A/${version}/OCRA.ttf"; + sha256 = "0kpmjjxwzm84z8maz6lq9sk1b0xv1zkvl28lwj7i0m2xf04qixd0"; + }; + + dontUnpack = true; + + installPhase = '' + install -D -m 0644 $src $out/share/fonts/truetype/OCRA.ttf + ''; + + meta = with lib; { + description = "ANSI OCR font from the '60s. CYBER"; + homepage = "https://sourceforge.net/projects/ocr-a-font/"; + license = licenses.publicDomain; + maintainers = with maintainers; [ V ]; + }; +} diff --git a/pkgs/data/themes/greybird/default.nix b/pkgs/data/themes/greybird/default.nix index 202424eeb2c..06496ea9be1 100644 --- a/pkgs/data/themes/greybird/default.nix +++ b/pkgs/data/themes/greybird/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "greybird"; - version = "3.22.14"; + version = "3.22.15"; src = fetchFromGitHub { owner = "shimmerproject"; repo = pname; rev = "v${version}"; - sha256 = "0b0axzrvdsv7aa029idz4rs1jm6df4ff3v4j4d5wf4yiypb48js9"; + sha256 = "1fk66fxy2lif9ngazlgkpsziw216i4b1ld2zm97cadf7n97376g9"; }; nativeBuildInputs = [ diff --git a/pkgs/data/themes/matcha/default.nix b/pkgs/data/themes/matcha/default.nix index 3d88a78b39f..4507e3c2f15 100644 --- a/pkgs/data/themes/matcha/default.nix +++ b/pkgs/data/themes/matcha/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "matcha-gtk-theme"; - version = "2021-08-23"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; rev = version; - sha256 = "sha256-gemDiGcr7xLv247w9J1CMOSKg2tWp8ADKpG16qa3hZQ="; + sha256 = "064x340z6fif59bbk1p7ryl6xfj8hlf42ld7h8prcjsyghpznw15"; }; buildInputs = [ gdk-pixbuf librsvg ]; diff --git a/pkgs/data/themes/venta/default.nix b/pkgs/data/themes/venta/default.nix index 83de638674e..f536358d5dc 100644 --- a/pkgs/data/themes/venta/default.nix +++ b/pkgs/data/themes/venta/default.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { pname = "venta"; - version = "0.6"; + version = "0.7"; src = fetchFromGitHub { owner = "darkomarko42"; repo = pname; rev = version; - sha256 = "1fhiq1kji5qmwsh8335rzilvhs30g5jp126czf2rf532iba0ivd7"; + sha256 = "0vgm65mb8qd6nbkkinmqb1hldksfgd6281l58y28jc5q4244l9wp"; }; buildInputs = [ diff --git a/pkgs/desktops/lxqt/lxqt-config/default.nix b/pkgs/desktops/lxqt/lxqt-config/default.nix index 60e6ca3d4e8..745c4e71b5e 100644 --- a/pkgs/desktops/lxqt/lxqt-config/default.nix +++ b/pkgs/desktops/lxqt/lxqt-config/default.nix @@ -3,6 +3,7 @@ , fetchFromGitHub , cmake , pkg-config +, glib , lxqt-build-tools , qtbase , qtx11extras @@ -34,6 +35,7 @@ mkDerivation rec { ]; buildInputs = [ + glib.bin qtbase qtx11extras qttools @@ -51,6 +53,12 @@ mkDerivation rec { xorg.xf86inputlibinput.dev ]; + postPatch = '' + substituteInPlace lxqt-config-appearance/configothertoolkits.cpp \ + --replace 'QStringLiteral("gsettings' \ + 'QStringLiteral("${glib.bin}/bin/gsettings' + ''; + passthru.updateScript = lxqtUpdateScript { inherit pname version src; }; meta = with lib; { diff --git a/pkgs/desktops/pantheon/apps/elementary-code/default.nix b/pkgs/desktops/pantheon/apps/elementary-code/default.nix index 8516133b18d..df448079c5a 100644 --- a/pkgs/desktops/pantheon/apps/elementary-code/default.nix +++ b/pkgs/desktops/pantheon/apps/elementary-code/default.nix @@ -1,6 +1,5 @@ { lib, stdenv , fetchFromGitHub -, fetchpatch , nix-update-script , pantheon , pkg-config @@ -31,7 +30,7 @@ stdenv.mkDerivation rec { pname = "elementary-code"; - version = "6.0.0"; + version = "6.0.1"; repoName = "code"; @@ -39,18 +38,9 @@ stdenv.mkDerivation rec { owner = "elementary"; repo = repoName; rev = version; - sha256 = "1w1m52mq3zr9alkxk1c0s4ncscka1km5ppd0r6zm86qan9cjwq0f"; + sha256 = "120328pprzqj4587yj54yya9v2mv1rfwylpmxyr5l2qf80cjxi9d"; }; - patches = [ - # Upstream code not respecting our localedir - # https://github.com/elementary/code/pull/1090 - (fetchpatch { - url = "https://github.com/elementary/code/commit/88dc40d7bbcc2288ada6673eb8f4fab345d97882.patch"; - sha256 = "16y20bvslcm390irlib759703lvf7w6rz4xzaiazjj1r1njwinvv"; - }) - ]; - passthru = { updateScript = nix-update-script { attrPath = "pantheon.${pname}"; diff --git a/pkgs/desktops/pantheon/apps/elementary-files/default.nix b/pkgs/desktops/pantheon/apps/elementary-files/default.nix index dcdd1bb9ace..9ac17741745 100644 --- a/pkgs/desktops/pantheon/apps/elementary-files/default.nix +++ b/pkgs/desktops/pantheon/apps/elementary-files/default.nix @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { pname = "elementary-files"; - version = "6.0.2"; + version = "6.0.3"; repoName = "files"; @@ -42,7 +42,7 @@ stdenv.mkDerivation rec { owner = "elementary"; repo = repoName; rev = version; - sha256 = "1i514r3adypmcwinmv4c1kybims16xi4i3akx0yy04dib92hbk7c"; + sha256 = "10hgj5rrqxzk4q8jlhkwwrs4hgyavlhz3z1pqf36y663bq3h0izv"; }; passthru = { diff --git a/pkgs/desktops/pantheon/apps/elementary-mail/default.nix b/pkgs/desktops/pantheon/apps/elementary-mail/default.nix index 6d0b752c1d1..743ed40d6dc 100644 --- a/pkgs/desktops/pantheon/apps/elementary-mail/default.nix +++ b/pkgs/desktops/pantheon/apps/elementary-mail/default.nix @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { pname = "elementary-mail"; - version = "6.1.1"; + version = "6.2.0"; repoName = "mail"; @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { owner = "elementary"; repo = repoName; rev = version; - sha256 = "15ai0x9236pjx76m0756nyc1by78v0lg1dgdiifk868krdvipzzx"; + sha256 = "1ab620zhwqqjq1bs1alvpcw9jmdxjij0ywczvwbg8gqvcsc80lkn"; }; passthru = { diff --git a/pkgs/desktops/pantheon/apps/elementary-tasks/default.nix b/pkgs/desktops/pantheon/apps/elementary-tasks/default.nix index bec0556a377..545a21ba200 100644 --- a/pkgs/desktops/pantheon/apps/elementary-tasks/default.nix +++ b/pkgs/desktops/pantheon/apps/elementary-tasks/default.nix @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { pname = "elementary-tasks"; - version = "6.0.3"; + version = "6.0.4"; repoName = "tasks"; @@ -34,7 +34,7 @@ stdenv.mkDerivation rec { owner = "elementary"; repo = repoName; rev = version; - sha256 = "0a6zgf7di4jyl764pn78wbanm0i5vrkk5ks3cfsvi3baprf3j9d5"; + sha256 = "1gb51gm8qgd8yzhqb7v69p2f1fgm3qf534if4lc85jrjsb8hgmhl"; }; passthru = { diff --git a/pkgs/desktops/pantheon/apps/switchboard-plugs/applications/default.nix b/pkgs/desktops/pantheon/apps/switchboard-plugs/applications/default.nix index 3b3cbf64ef8..22c2f4f64af 100644 --- a/pkgs/desktops/pantheon/apps/switchboard-plugs/applications/default.nix +++ b/pkgs/desktops/pantheon/apps/switchboard-plugs/applications/default.nix @@ -1,6 +1,5 @@ { lib, stdenv , fetchFromGitHub -, fetchpatch , nix-update-script , pantheon , meson @@ -16,24 +15,15 @@ stdenv.mkDerivation rec { pname = "switchboard-plug-applications"; - version = "6.0.0"; + version = "6.0.1"; src = fetchFromGitHub { owner = "elementary"; repo = pname; rev = version; - sha256 = "0hgvmrgg6g2sjb3sda7kzfcd3zgngd5w982drl6ll44k1mh16gsj"; + sha256 = "18izmzhqp6x5ivha9yl8gyz9adyrsylw7w5p0cwm1bndgqbi7yh5"; }; - patches = [ - # Upstream code not respecting our localedir - # https://github.com/elementary/switchboard-plug-applications/pull/163 - (fetchpatch { - url = "https://github.com/elementary/switchboard-plug-applications/commit/25db490654ab41694be7b7ba19218376f42fbb8d.patch"; - sha256 = "16y8zcwnnjsh72ifpyqcdb9f5ajdj0iy8kb5sj6v77c1cxdhrv29"; - }) - ]; - passthru = { updateScript = nix-update-script { attrPath = "pantheon.${pname}"; diff --git a/pkgs/desktops/pantheon/apps/switchboard-plugs/onlineaccounts/default.nix b/pkgs/desktops/pantheon/apps/switchboard-plugs/onlineaccounts/default.nix index 9aa9d7e6780..5e8447f629a 100644 --- a/pkgs/desktops/pantheon/apps/switchboard-plugs/onlineaccounts/default.nix +++ b/pkgs/desktops/pantheon/apps/switchboard-plugs/onlineaccounts/default.nix @@ -24,13 +24,13 @@ stdenv.mkDerivation rec { pname = "switchboard-plug-onlineaccounts"; - version = "6.2.0"; + version = "6.2.1"; src = fetchFromGitHub { owner = "elementary"; repo = pname; rev = version; - sha256 = "1lp3i31jzp21n43d1mh4d4i8zgim3q3j4inw4hmyimyql2s83cc3"; + sha256 = "1q3f7zr04p2100mb255zy38il2i47l6vqdc9a9acjbk3n7q5sf92"; }; passthru = { diff --git a/pkgs/desktops/pantheon/desktop/gala/default.nix b/pkgs/desktops/pantheon/desktop/gala/default.nix index 3f674075133..665007fcd63 100644 --- a/pkgs/desktops/pantheon/desktop/gala/default.nix +++ b/pkgs/desktops/pantheon/desktop/gala/default.nix @@ -75,6 +75,11 @@ stdenv.mkDerivation rec { patches = [ ./plugins-dir.patch + # https://github.com/elementary/gala/pull/1259 + # https://github.com/NixOS/nixpkgs/issues/139404 + # Remove this patch when it is included in a new release + # of gala OR when we no longer use mutter 3.38 for pantheon + ./fix-session-crash-when-taking-screenshots.patch ]; postPatch = '' diff --git a/pkgs/desktops/pantheon/desktop/gala/fix-session-crash-when-taking-screenshots.patch b/pkgs/desktops/pantheon/desktop/gala/fix-session-crash-when-taking-screenshots.patch new file mode 100644 index 00000000000..f2393a804bc --- /dev/null +++ b/pkgs/desktops/pantheon/desktop/gala/fix-session-crash-when-taking-screenshots.patch @@ -0,0 +1,50 @@ +From fa3c39331d4ef56a13019f45d811bde1fc755c21 Mon Sep 17 00:00:00 2001 +From: Bobby Rong <rjl931189261@126.com> +Date: Sat, 25 Sep 2021 23:21:01 +0800 +Subject: [PATCH] Fix session crash when taking screenshots with mutter 3.38 + +--- + src/ScreenshotManager.vala | 5 ++--- + vapi/mutter-clutter.vapi | 2 +- + 2 files changed, 3 insertions(+), 4 deletions(-) + +diff --git a/src/ScreenshotManager.vala b/src/ScreenshotManager.vala +index 3ffb0123..388fee1a 100644 +--- a/src/ScreenshotManager.vala ++++ b/src/ScreenshotManager.vala +@@ -354,12 +354,11 @@ namespace Gala { + paint_flags |= Clutter.PaintFlag.FORCE_CURSORS; + } + +- unowned var data = image.get_data (); + if (GLib.ByteOrder.HOST == GLib.ByteOrder.LITTLE_ENDIAN) { + wm.stage.paint_to_buffer ( + {x, y, width, height}, + scale, +- ref data, ++ image.get_data (), + image.get_stride (), + Cogl.PixelFormat.BGRA_8888_PRE, + paint_flags +@@ -368,7 +367,7 @@ namespace Gala { + wm.stage.paint_to_buffer ( + {x, y, width, height}, + scale, +- ref data, ++ image.get_data (), + image.get_stride (), + Cogl.PixelFormat.ARGB_8888_PRE, + paint_flags +diff --git a/vapi/mutter-clutter.vapi b/vapi/mutter-clutter.vapi +index 5b778cb2..95de24be 100644 +--- a/vapi/mutter-clutter.vapi ++++ b/vapi/mutter-clutter.vapi +@@ -7336,7 +7336,7 @@ namespace Clutter { + [Version (since = "1.2")] + public bool get_use_alpha (); + #if HAS_MUTTER338 +- public bool paint_to_buffer (Cairo.RectangleInt rect, float scale, [CCode (array_length = false)] ref unowned uint8[] data, int stride, Cogl.PixelFormat format, Clutter.PaintFlag paint_flags) throws GLib.Error; ++ public bool paint_to_buffer (Cairo.RectangleInt rect, float scale, [CCode (array_length = false, type = "uint8_t*")] uint8[] data, int stride, Cogl.PixelFormat format, Clutter.PaintFlag paint_flags) throws GLib.Error; + public void paint_to_framebuffer (Cogl.Framebuffer framebuffer, Cairo.RectangleInt rect, float scale, Clutter.PaintFlag paint_flags); + #else + [Version (since = "0.4")] diff --git a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/applications-menu/default.nix b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/applications-menu/default.nix index 29432bf1965..6799887247d 100644 --- a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/applications-menu/default.nix +++ b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/applications-menu/default.nix @@ -12,7 +12,6 @@ , libgee , gettext , gtk3 -, appstream , gnome-menus , json-glib , elementary-dock @@ -27,7 +26,7 @@ stdenv.mkDerivation rec { pname = "wingpanel-applications-menu"; - version = "2.8.2"; + version = "2.9.0"; repoName = "applications-menu"; @@ -35,7 +34,7 @@ stdenv.mkDerivation rec { owner = "elementary"; repo = repoName; rev = version; - sha256 = "1pm3dnq35vbvyxqapmfy4frfwhc1l2zh634annlmbjiyfp5mzk0q"; + sha256 = "0mwjw2ghbdj336ax5srxbqnjprdhj1if7sm9k9idqkmifpzccs7i"; }; passthru = { @@ -45,7 +44,6 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ - appstream gettext meson ninja diff --git a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/notifications/default.nix b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/notifications/default.nix index 1a101a8a886..46d90e4acc3 100644 --- a/pkgs/desktops/pantheon/desktop/wingpanel-indicators/notifications/default.nix +++ b/pkgs/desktops/pantheon/desktop/wingpanel-indicators/notifications/default.nix @@ -3,7 +3,6 @@ , nix-update-script , pantheon , pkg-config -, fetchpatch , meson , ninja , vala @@ -17,24 +16,15 @@ stdenv.mkDerivation rec { pname = "wingpanel-indicator-notifications"; - version = "6.0.0"; + version = "6.0.1"; src = fetchFromGitHub { owner = "elementary"; repo = pname; rev = version; - sha256 = "1pvcpk1d2zh9pvw0clv3bhf2plcww6nbxs6j7xjbvnaqs7d6i1k2"; + sha256 = "1qrbg8l3ifz09jx6v5j7hmgw0hmirj6mh3z634yl1cadz45p8fc9"; }; - patches = [ - # Upstream code not respecting our localedir - # https://github.com/elementary/wingpanel-indicator-notifications/pull/218 - (fetchpatch { - url = "https://github.com/elementary/wingpanel-indicator-notifications/commit/c7e73f0683561345935a959dafa2083b7e22fe99.patch"; - sha256 = "10xiyq42bqfmih1jgqpq64nha3n0y7ra3j7j0q27rn5hhhgbyjs7"; - }) - ]; - passthru = { updateScript = nix-update-script { attrPath = "pantheon.${pname}"; diff --git a/pkgs/desktops/pantheon/desktop/wingpanel/default.nix b/pkgs/desktops/pantheon/desktop/wingpanel/default.nix index 1ae9f9f4aaa..4529b519bb0 100644 --- a/pkgs/desktops/pantheon/desktop/wingpanel/default.nix +++ b/pkgs/desktops/pantheon/desktop/wingpanel/default.nix @@ -22,13 +22,13 @@ stdenv.mkDerivation rec { pname = "wingpanel"; - version = "3.0.0"; + version = "3.0.1"; src = fetchFromGitHub { owner = "elementary"; repo = pname; rev = version; - sha256 = "0ycys24y1rrz0ydpvs4mc89p4k986q1ziwbvziinxr1wsli9v1dj"; + sha256 = "078yi36r452sc33mv2ck8z0icya1lhzhickllrlhc60rdri36sb8"; }; passthru = { diff --git a/pkgs/desktops/xfce/applications/xfdashboard/default.nix b/pkgs/desktops/xfce/applications/xfdashboard/default.nix index 527696c995e..bee7f513608 100644 --- a/pkgs/desktops/xfce/applications/xfdashboard/default.nix +++ b/pkgs/desktops/xfce/applications/xfdashboard/default.nix @@ -17,11 +17,11 @@ mkXfceDerivation { category = "apps"; pname = "xfdashboard"; - version = "0.9.3"; + version = "0.9.4"; rev-prefix = ""; odd-unstable = false; - sha256 = "sha256-xoeqVsfvBH2zzQqDUJGiA47hgVvEkvVf9bNYQmyiytk="; + sha256 = "sha256-ZDrBLSfRBw5/nIs/x1jJQCVgNJer85b8Hm1kkX1Dk3s="; buildInputs = [ clutter diff --git a/pkgs/desktops/xfce/core/thunar/default.nix b/pkgs/desktops/xfce/core/thunar/default.nix index 42c0f1ef674..2672da6ad37 100644 --- a/pkgs/desktops/xfce/core/thunar/default.nix +++ b/pkgs/desktops/xfce/core/thunar/default.nix @@ -21,9 +21,9 @@ let unwrapped = mkXfceDerivation { category = "xfce"; pname = "thunar"; - version = "4.16.9"; + version = "4.16.10"; - sha256 = "sha256-TpazNC4TwNhcEGQ4AQICxbmfZ1i4RE9vXkM9Zln80vE="; + sha256 = "sha256-BeEy8+zEsJ5fJAbvP37tfekqF5LTHil0RDcE5RY0f64="; nativeBuildInputs = [ docbook_xsl diff --git a/pkgs/development/compilers/crystal/build-package.nix b/pkgs/development/compilers/crystal/build-package.nix index 67c8128f6b5..2328e76ad77 100644 --- a/pkgs/development/compilers/crystal/build-package.nix +++ b/pkgs/development/compilers/crystal/build-package.nix @@ -10,7 +10,7 @@ , format ? "make" , installManPages ? true # Specify binaries to build in the form { foo.src = "src/foo.cr"; } - # The default `crystal build` options can be overridden with { foo.options = [ "--no-debug" ]; } + # The default `crystal build` options can be overridden with { foo.options = [ "--optionname" ]; } , crystalBinaries ? { } , ... }@args: @@ -32,8 +32,7 @@ let }) (import shardsFile)); - # we previously had --no-debug here but that is not recommended by upstream - defaultOptions = [ "--release" "--progress" "--verbose" ]; + defaultOptions = [ "--release" "--progress" "--verbose" "--no-debug" ]; buildDirectly = shardsFile == null || crystalBinaries != { }; @@ -120,7 +119,7 @@ stdenv.mkDerivation (mkDerivationArgs // { installCheckPhase = args.installCheckPhase or '' for f in $out/bin/*; do - $f --help + $f --help > /dev/null done ''; diff --git a/pkgs/development/compilers/crystal/default.nix b/pkgs/development/compilers/crystal/default.nix index 8fc4a15efce..11bf1cc9636 100644 --- a/pkgs/development/compilers/crystal/default.nix +++ b/pkgs/development/compilers/crystal/default.nix @@ -56,6 +56,7 @@ let buildCommand = '' mkdir -p $out tar --strip-components=1 -C $out -xf ${src} + patchShebangs $out/bin/crystal ''; }; @@ -93,6 +94,10 @@ let outputs = [ "out" "lib" "bin" ]; postPatch = '' + export TMP=$(mktemp -d) + export HOME=$TMP + mkdir -p $HOME/test + # Add dependency of crystal to docs to avoid issue on flag changes between releases # https://github.com/crystal-lang/crystal/pull/8792#issuecomment-614004782 substituteInPlace Makefile \ @@ -103,39 +108,35 @@ let ln -sf spec/compiler spec/std - # Dirty fix for when no sandboxing is enabled - rm -rf /tmp/crystal - mkdir -p /tmp/crystal + mkdir -p $TMP/crystal substituteInPlace spec/std/file_spec.cr \ --replace '/bin/ls' '${coreutils}/bin/ls' \ - --replace '/usr/share' '/tmp/crystal' \ - --replace '/usr' '/tmp' + --replace '/usr/share' "$TMP/crystal" \ + --replace '/usr' "$TMP" \ + --replace '/tmp' "$TMP" substituteInPlace spec/std/process_spec.cr \ --replace '/bin/cat' '${coreutils}/bin/cat' \ --replace '/bin/ls' '${coreutils}/bin/ls' \ --replace '/usr/bin/env' '${coreutils}/bin/env' \ --replace '"env"' '"${coreutils}/bin/env"' \ - --replace '"/usr"' '"/tmp"' - - substituteInPlace spec/std/socket/tcp_server_spec.cr \ - --replace '{% if flag?(:gnu) %}"listen: "{% else %}"bind: "{% end %}' '"bind: "' + --replace '/usr' "$TMP" \ + --replace '/tmp' "$TMP" substituteInPlace spec/std/system_spec.cr \ --replace '`hostname`' '`${hostname}/bin/hostname`' - # See https://github.com/crystal-lang/crystal/pull/8640 - substituteInPlace spec/std/http/cookie_spec.cr \ - --replace '01 Jan 2020' '01 Jan #{Time.utc.year + 2}' - # See https://github.com/crystal-lang/crystal/issues/8629 substituteInPlace spec/std/socket/udp_socket_spec.cr \ --replace 'it "joins and transmits to multicast groups"' 'pending "joins and transmits to multicast groups"' + ''; - # See https://github.com/crystal-lang/crystal/pull/8699 - substituteInPlace spec/std/xml/xml_spec.cr \ - --replace 'it "handles errors"' 'pending "handles errors"' + # Defaults are 4 + preBuild = '' + export CRYSTAL_WORKERS=$NIX_BUILD_CORES + export threads=$NIX_BUILD_CORES + export CRYSTAL_CACHE_DIR=$TMP ''; buildInputs = commonBuildInputs extraBuildInputs; @@ -197,9 +198,6 @@ let checkTarget = "compiler_spec"; preCheck = '' - export HOME=/tmp - mkdir -p $HOME/test - export LIBRARY_PATH=${lib.makeLibraryPath checkInputs}:$LIBRARY_PATH export PATH=${lib.makeBinPath checkInputs}:$PATH ''; @@ -214,60 +212,26 @@ let license = licenses.asl20; maintainers = with maintainers; [ david50407 fabianhjr manveru peterhoeg ]; platforms = builtins.attrNames archs; - # Error running at_exit handler: Nil assertion failed - broken = lib.versions.minor version == "32" && stdenv.isDarwin; + broken = lib.versionOlder version "0.36.1" && stdenv.isDarwin; }; }) ); in rec { - binaryCrystal_0_31 = genericBinary { - version = "0.31.1"; + binaryCrystal_0_36 = genericBinary { + version = "0.36.1"; sha256s = { - x86_64-linux = "0r8salf572xrnr4m6ll9q5hz6jj8q7ff1rljlhmqb1r26a8mi2ih"; - i686-linux = "0hridnis5vvrswflx0q67xfg5hryhz6ivlwrb9n4pryj5d1gwjrr"; - x86_64-darwin = "1dgxgv0s3swkc5cwawzgpbc6bcd2nx4hjxc7iw2h907y1vgmbipz"; + x86_64-linux = "065vzq34g7hgzl2mrzy9gwwsfikc78nj7xxsbrk67r6rz0a7bk1q"; + i686-linux = "18m4b1lnd682i5ygbg6cljqjny60nn2mlrzrk765h2ip6fljqbm1"; + x86_64-darwin = "0xggayk92zh64pb5sz77n12hkcd1hg8kw90z7gb18594q551sf1v"; }; }; - crystal_0_31 = generic { - version = "0.31.1"; - sha256 = "1dswxa32w16gnc6yjym12xj7ibg0g6zk3ngvl76lwdjqb1h6lwz8"; - doCheck = false; # 5 checks are failing now - binary = binaryCrystal_0_31; - }; - - crystal_0_32 = generic { - version = "0.32.1"; - sha256 = "120ndi3nhh2r52hjvhwfb49cdggr1bzdq6b8xg7irzavhjinfza6"; - binary = crystal_0_31; - }; - - crystal_0_33 = generic { - version = "0.33.0"; - sha256 = "1zg0qixcws81s083wrh54hp83ng2pa8iyyafaha55mzrh8293jbi"; - binary = crystal_0_32; - }; - - crystal_0_34 = generic { - version = "0.34.0"; - sha256 = "110lfpxk9jnqyznbfnilys65ixj5sdmy8pvvnlhqhc3ccvrlnmq4"; - binary = crystal_0_33; - }; - - crystal_0_35 = generic { - version = "0.35.1"; - sha256 = "0p51bjl1nsvwsm64lqq421dcsxa201w7wwq8plw4r8wqarpq0g69"; - binary = crystal_0_34; - # Needs git to build as per https://github.com/crystal-lang/crystal/issues/9789 - extraBuildInputs = [ git ]; - }; - crystal_0_36 = generic { version = "0.36.1"; sha256 = "sha256-5rjrvwZKM4lHpmxLyUVbi0Zw98xT+iJKonxwfUwS/Wk="; - binary = crystal_0_35; + binary = binaryCrystal_0_36; }; crystal_1_0 = generic { diff --git a/pkgs/development/compilers/flutter/default.nix b/pkgs/development/compilers/flutter/default.nix index f7dc6f8e87c..940b379173f 100644 --- a/pkgs/development/compilers/flutter/default.nix +++ b/pkgs/development/compilers/flutter/default.nix @@ -4,18 +4,32 @@ let getPatches = dir: let files = builtins.attrNames (builtins.readDir dir); in map (f: dir + ("/" + f)) files; - version = "2.2.1"; + version = "2.5.1"; channel = "stable"; filename = "flutter_linux_${version}-${channel}.tar.xz"; -in -{ + + # Decouples flutter derivation from dart derivation, + # use specific dart version to not need to bump dart derivation when bumping flutter. + dartVersion = "2.14.2"; + dartSourceBase = "https://storage.googleapis.com/dart-archive/channels"; + dartForFlutter = dart.override { + version = dartVersion; + sources = { + "${dartVersion}-x86_64-linux" = fetchurl { + url = "${dartSourceBase}/stable/release/${dartVersion}/sdk/dartsdk-linux-x64-release.zip"; + sha256 = "1gr2dr683kz0a0k6rcn4jcbxf9fr2xlzi5fcgn1lzrrxvys2lddx"; + }; + }; + }; +in { mkFlutter = mkFlutter; stable = mkFlutter rec { - inherit dart version; + inherit version; + dart = dartForFlutter; pname = "flutter"; src = fetchurl { - url = "https://storage.googleapis.com/flutter_infra/releases/${channel}/linux/${filename}"; - sha256 = "009pwk2casz10gibgjpz08102wxmkq9iq3994b3c2q342g6526g0"; + url = "https://storage.googleapis.com/flutter_infra_release/releases/${channel}/linux/${filename}"; + sha256 = "12ycz7iasrc9p9c6zr95l6llyji3za43gsx8cmr2kjfiv23bcrv2"; }; patches = getPatches ./patches; }; diff --git a/pkgs/development/compilers/flutter/flutter.nix b/pkgs/development/compilers/flutter/flutter.nix index 5cab3b929f7..e0ede49b091 100644 --- a/pkgs/development/compilers/flutter/flutter.nix +++ b/pkgs/development/compilers/flutter/flutter.nix @@ -8,12 +8,10 @@ { bash , buildFHSUserEnv , cacert -, coreutils , git , runCommand , stdenv , lib -, fetchurl , alsa-lib , dbus , expat @@ -33,6 +31,7 @@ , nspr , nss , systemd +, which }: let drvName = "flutter-${version}"; @@ -74,10 +73,27 @@ let ''; installPhase = '' + runHook preInstall + mkdir -p $out cp -r . $out mkdir -p $out/bin/cache/ ln -sf ${dart} $out/bin/cache/dart-sdk + + runHook postInstall + ''; + + doInstallCheck = true; + installCheckInputs = [ which ]; + installCheckPhase = '' + runHook preInstallCheck + + export HOME="$(mktemp -d)" + $out/bin/flutter config --android-studio-dir $HOME + $out/bin/flutter config --android-sdk $HOME + $out/bin/flutter --version | fgrep -q '${version}' + + runHook postInstallCheck ''; }; diff --git a/pkgs/development/compilers/ghcjs/8.10/default.nix b/pkgs/development/compilers/ghcjs/8.10/default.nix index b2d48088844..f8e7c31353f 100644 --- a/pkgs/development/compilers/ghcjs/8.10/default.nix +++ b/pkgs/development/compilers/ghcjs/8.10/default.nix @@ -109,8 +109,7 @@ in stdenv.mkDerivation { inherit passthru; meta = { - # The emscripten is broken on darwin - platforms = lib.platforms.linux; + platforms = with lib.platforms; linux ++ darwin; # Hydra limits jobs to only outputting 1 gigabyte worth of files. # GHCJS outputs over 3 gigabytes. diff --git a/pkgs/development/compilers/julia/1.6-bin.nix b/pkgs/development/compilers/julia/1.6-bin.nix index d8640228513..ad6083a1ea3 100644 --- a/pkgs/development/compilers/julia/1.6-bin.nix +++ b/pkgs/development/compilers/julia/1.6-bin.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "julia-bin"; - version = "1.6.2"; + version = "1.6.3"; src = { x86_64-linux = fetchurl { url = "https://julialang-s3.julialang.org/bin/linux/x64/${lib.versions.majorMinor version}/julia-${version}-linux-x86_64.tar.gz"; - sha256 = "0h1jh8gbvxb0pl1an0fbbg4lbd0sa24yj2f4yqwavw8dbdvvbd1y"; + sha256 = "0jrijj9snfx70692z2301rjassvwjcsjbxdsjyif9hyp9hrrqif7"; }; }.${stdenv.hostPlatform.system} or (throw "Unsupported system: ${stdenv.hostPlatform.system}"); @@ -20,7 +20,6 @@ stdenv.mkDerivation rec { patches = [ # Source release Nix patch(es) relevant for binary releases as well. ./patches/1.6-bin/0002-nix-Skip-tempname-test-broken-in-sandbox.patch - ./patches/1.6-bin/0003-nix-Skip-chown-tests-broken-in-sandbox.patch ./patches/1.6-bin/0005-nix-Enable-parallel-unit-tests-for-sandbox.patch ]; postPatch = '' diff --git a/pkgs/development/compilers/julia/patches/1.6-bin/0003-nix-Skip-chown-tests-broken-in-sandbox.patch b/pkgs/development/compilers/julia/patches/1.6-bin/0003-nix-Skip-chown-tests-broken-in-sandbox.patch deleted file mode 100644 index e63c88c8fe3..00000000000 --- a/pkgs/development/compilers/julia/patches/1.6-bin/0003-nix-Skip-chown-tests-broken-in-sandbox.patch +++ /dev/null @@ -1,27 +0,0 @@ -From b20357fb1044d2c100172b1d5cbdf6c6d9bd3590 Mon Sep 17 00:00:00 2001 -From: Pontus Stenetorp <pontus@stenetorp.se> -Date: Thu, 8 Apr 2021 05:10:39 +0000 -Subject: [PATCH 3/6] nix: Skip `chown` tests broken in sandbox - ---- - test/file.jl | 4 ++-- - 1 file changed, 2 insertions(+), 2 deletions(-) - -diff --git a/test/file.jl b/test/file.jl -index bd4dd78f62..06fd4e49da 100644 ---- a/test/file.jl -+++ b/test/file.jl -@@ -503,8 +503,8 @@ if !Sys.iswindows() - @test stat(file).gid == 0 - @test stat(file).uid == 0 - else -- @test_throws Base._UVError("chown($(repr(file)), -2, -1)", Base.UV_EPERM) chown(file, -2, -1) # Non-root user cannot change ownership to another user -- @test_throws Base._UVError("chown($(repr(file)), -1, -2)", Base.UV_EPERM) chown(file, -1, -2) # Non-root user cannot change group to a group they are not a member of (eg: nogroup) -+ @test_skip @test_throws Base._UVError("chown($(repr(file)), -2, -1)", Base.UV_EPERM) chown(file, -2, -1) # Non-root user cannot change ownership to another user -+ @test_skip @test_throws Base._UVError("chown($(repr(file)), -1, -2)", Base.UV_EPERM) chown(file, -1, -2) # Non-root user cannot change group to a group they are not a member of (eg: nogroup) - end - else - # test that chown doesn't cause any errors for Windows --- -2.29.3 - diff --git a/pkgs/development/compilers/nextpnr/default.nix b/pkgs/development/compilers/nextpnr/default.nix index 949c70318ac..bb233e34c19 100644 --- a/pkgs/development/compilers/nextpnr/default.nix +++ b/pkgs/development/compilers/nextpnr/default.nix @@ -14,21 +14,21 @@ let in stdenv.mkDerivation rec { pname = "nextpnr"; - version = "2021.08.16"; + version = "2021.09.27"; srcs = [ (fetchFromGitHub { owner = "YosysHQ"; repo = "nextpnr"; - rev = "b37d133c43c45862bd5c550b5d7fffaa8c49b968"; - sha256 = "0qc9d8cay2j5ggn0mgjq484vv7a14na16s9dmp7bqz7r9cn4b98n"; + rev = "9d8d3bdbc48133ff7758c9c5293e5904bc6e5ba7"; + sha256 = "sha256-5Axo8qX2+ATqQ170QqfhRwYfCRQLCKBW1kc89x9XljE="; name = "nextpnr"; }) (fetchFromGitHub { owner = "YosysHQ"; repo = "nextpnr-tests"; rev = "ccc61e5ec7cc04410462ec3196ad467354787afb"; - sha256 = "09a0bhrphr3rsppryrfak4rhziyj8k3s17kgb0vgm0abjiz0jgam"; + sha256 = "sha256-VT0JfpRLgfo2WG+eoMdE0scPM5nKZZ/v1XlkeDNcQCU="; name = "nextpnr-tests"; }) ]; @@ -60,7 +60,7 @@ stdenv.mkDerivation rec { patchPhase = with builtins; '' # use PyPy for icestorm if enabled - substituteInPlace ./ice40/family.cmake \ + substituteInPlace ./ice40/CMakeLists.txt \ --replace ''\'''${PYTHON_EXECUTABLE}' '${icestorm.pythonInterp}' ''; diff --git a/pkgs/development/compilers/ocaml/4.13.nix b/pkgs/development/compilers/ocaml/4.13.nix index 6b0d379193e..256242e9cbb 100644 --- a/pkgs/development/compilers/ocaml/4.13.nix +++ b/pkgs/development/compilers/ocaml/4.13.nix @@ -1,9 +1,6 @@ import ./generic.nix { major_version = "4"; minor_version = "13"; - patch_version = "0-rc2"; - src = fetchTarball { - url = "https://caml.inria.fr/pub/distrib/ocaml-4.13/ocaml-4.13.0~rc2.tar.xz"; - sha256 = "1w4sdrs5s1bhbisgz44ysi2j1n13qd3slgs34ppglpwmqqw6ply2"; - }; + patch_version = "0"; + sha256 = "sha256:1f7gnndzs6qcyy2gnzalnhm808pifxhvxg2qp5dnsziz6li7x303"; } diff --git a/pkgs/development/compilers/vala/default.nix b/pkgs/development/compilers/vala/default.nix index 809e81ae548..013b024f3bc 100644 --- a/pkgs/development/compilers/vala/default.nix +++ b/pkgs/development/compilers/vala/default.nix @@ -100,7 +100,7 @@ let homepage = "https://wiki.gnome.org/Projects/Vala"; license = licenses.lgpl21Plus; platforms = platforms.unix; - maintainers = with maintainers; [ antono jtojnar peterhoeg maxeaubrey ] ++ teams.pantheon.members; + maintainers = with maintainers; [ antono jtojnar maxeaubrey ] ++ teams.pantheon.members; }; }); diff --git a/pkgs/development/compilers/yosys/default.nix b/pkgs/development/compilers/yosys/default.nix index 7a733ce2cb9..f2624d12418 100644 --- a/pkgs/development/compilers/yosys/default.nix +++ b/pkgs/development/compilers/yosys/default.nix @@ -34,13 +34,13 @@ stdenv.mkDerivation rec { pname = "yosys"; - version = "0.9+4276"; + version = "0.10+1"; src = fetchFromGitHub { owner = "YosysHQ"; repo = "yosys"; - rev = "75a4cdfc8afc10fed80e43fb1ba31c7edaf6e361"; - sha256 = "13xb7ny6i0kr6z6xkj9wmmcj551si7w05r3cghq8h8wkikyh6c8p"; + rev = "7a7df9a3b4996b17bb774377483b15de49aa3d9b"; + sha256 = "sha256-gi/Q6loIQ75NTbS9b/Q8sdrl9NGBDae2+AAGHVYB0WI="; }; enableParallelBuilding = true; diff --git a/pkgs/development/embedded/openocd/default.nix b/pkgs/development/embedded/openocd/default.nix index 7b3a16fb75e..f61c0cbe517 100644 --- a/pkgs/development/embedded/openocd/default.nix +++ b/pkgs/development/embedded/openocd/default.nix @@ -5,6 +5,7 @@ , hidapi , libftdi1 , libusb1 +, libgpiod }: stdenv.mkDerivation rec { @@ -17,7 +18,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; - buildInputs = [ hidapi libftdi1 libusb1 ]; + buildInputs = [ hidapi libftdi1 libusb1 libgpiod ]; configureFlags = [ "--enable-jtag_vpi" @@ -29,6 +30,7 @@ stdenv.mkDerivation rec { (lib.enableFeature (! stdenv.isDarwin) "oocd_trace") "--enable-buspirate" (lib.enableFeature stdenv.isLinux "sysfsgpio") + (lib.enableFeature stdenv.isLinux "linuxgpiod") "--enable-remote-bitbang" ]; diff --git a/pkgs/development/interpreters/erlang/generic-builder.nix b/pkgs/development/interpreters/erlang/generic-builder.nix index 3d5c692930b..f4f7d648354 100644 --- a/pkgs/development/interpreters/erlang/generic-builder.nix +++ b/pkgs/development/interpreters/erlang/generic-builder.nix @@ -84,9 +84,13 @@ let in stdenv.mkDerivation ({ - name = "${baseName}-${version}" - + optionalString javacSupport "-javac" - + optionalString odbcSupport "-odbc"; + # name is used instead of pname to + # - not have to pass pnames as argument + # - have a separate pname for erlang (main module) + name = "${baseName}" + + optionalString javacSupport "_javac" + + optionalString odbcSupport "_odbc" + + "-${version}"; inherit src version; diff --git a/pkgs/development/interpreters/lua-5/build-lua-package.nix b/pkgs/development/interpreters/lua-5/build-lua-package.nix index 64e872ad5f6..e74649cab4a 100644 --- a/pkgs/development/interpreters/lua-5/build-lua-package.nix +++ b/pkgs/development/interpreters/lua-5/build-lua-package.nix @@ -82,66 +82,25 @@ let # configured trees) luarocks_config = "luarocks-config.lua"; luarocks_content = let - extraVariablesStr = lib.concatStringsSep "\n " - (lib.mapAttrsToList (k: v: "${k}='${v}';") extraVariables); - in '' - local_cache = "" - -- To prevent collisions when creating environments, we install the rock - -- files into per-package subdirectories - rocks_subdir = '${rocksSubdir}' - -- Then we need to tell luarocks where to find the rock files per - -- dependency - rocks_trees = { - ${lib.concatStringsSep "\n, " rocksTrees} - } - '' + lib.optionalString lua.pkgs.isLuaJIT '' - -- Luajit provides some additional functionality built-in; this exposes - -- that to luarock's dependency system - rocks_provided = { - jit='${lua.luaversion}-1'; - ffi='${lua.luaversion}-1'; - luaffi='${lua.luaversion}-1'; - bit='${lua.luaversion}-1'; - } - '' + '' - -- For single-output external dependencies - external_deps_dirs = { - ${lib.concatStringsSep "\n, " externalDepsDirs} - } - variables = { - -- Some needed machinery to handle multiple-output external dependencies, - -- as per https://github.com/luarocks/luarocks/issues/766 - ${lib.optionalString (lib.length depVariables > 0) '' - ${lib.concatStringsSep "\n " depVariables}''} - ${extraVariablesStr} - } - ${extraConfig} - ''; + generatedConfig = lua.pkgs.lib.generateLuarocksConfig { + inherit externalDeps; + inherit extraVariables; + inherit rocksSubdir; + inherit requiredLuaRocks; + }; + in + '' + ${generatedConfig} + ${extraConfig} + ''; rocksSubdir = "${attrs.pname}-${version}-rocks"; - externalDepsDirs = map - (x: "'${builtins.toString x}'") - (lib.filter (lib.isDerivation) externalDeps); - - rocksTrees = lib.imap0 - (i: dep: "{ name = [[dep-${toString i}]], root = '${dep}', rocks_dir = '${dep}/${dep.rocksSubdir}' }") - requiredLuaRocks; - # Filter out the lua derivation itself from the Lua module dependency # closure, as it doesn't have a rock tree :) requiredLuaRocks = lib.filter (d: d ? luaModule) (lua.pkgs.requiredLuaModules propagatedBuildInputs); - # Explicitly point luarocks to the relevant locations for multiple-output - # derivations that are external dependencies, to work around an issue it has - # (https://github.com/luarocks/luarocks/issues/766) - depVariables = lib.concatMap ({name, dep}: [ - "${name}_INCDIR='${lib.getDev dep}/include';" - "${name}_LIBDIR='${lib.getLib dep}/lib';" - "${name}_BINDIR='${lib.getBin dep}/bin';" - ]) externalDeps'; - # example externalDeps': [ { name = "CRYPTO"; dep = pkgs.openssl; } ] externalDeps' = lib.filter (dep: !lib.isDerivation dep) externalDeps; in diff --git a/pkgs/development/interpreters/lua-5/hooks/default.nix b/pkgs/development/interpreters/lua-5/hooks/default.nix new file mode 100644 index 00000000000..8fd725a9b8a --- /dev/null +++ b/pkgs/development/interpreters/lua-5/hooks/default.nix @@ -0,0 +1,27 @@ +# Hooks for building lua packages. +{ lua +, lib +, makeSetupHook +, findutils +, runCommand +}: + +let + callPackage = lua.pkgs.callPackage; + luaInterpreter = lua.interpreter; +in { + + lua-setup-hook = LuaPathSearchPaths: LuaCPathSearchPaths: + let + hook = ./setup-hook.sh; + in runCommand "lua-setup-hook.sh" { + # hum doesn't seem to like caps !! BUG ? + luapathsearchpaths=lib.escapeShellArgs LuaPathSearchPaths; + luacpathsearchpaths=lib.escapeShellArgs LuaCPathSearchPaths; + } '' + cp ${hook} hook.sh + substituteAllInPlace hook.sh + mv hook.sh $out + ''; + +} diff --git a/pkgs/development/interpreters/lua-5/setup-hook.sh b/pkgs/development/interpreters/lua-5/hooks/setup-hook.sh index 1c445b82afd..1c445b82afd 100644 --- a/pkgs/development/interpreters/lua-5/setup-hook.sh +++ b/pkgs/development/interpreters/lua-5/hooks/setup-hook.sh diff --git a/pkgs/development/interpreters/lua-5/setup-hook.nix b/pkgs/development/interpreters/lua-5/setup-hook.nix index 62caffd8d8a..e69de29bb2d 100644 --- a/pkgs/development/interpreters/lua-5/setup-hook.nix +++ b/pkgs/development/interpreters/lua-5/setup-hook.nix @@ -1,15 +0,0 @@ -{ runCommand, lib, }: - -LuaPathSearchPaths: LuaCPathSearchPaths: - -let - hook = ./setup-hook.sh; -in runCommand "lua-setup-hook.sh" { - # hum doesn't seem to like caps !! BUG ? - luapathsearchpaths=lib.escapeShellArgs LuaPathSearchPaths; - luacpathsearchpaths=lib.escapeShellArgs LuaCPathSearchPaths; -} '' - cp ${hook} hook.sh - substituteAllInPlace hook.sh - mv hook.sh $out -'' diff --git a/pkgs/development/interpreters/perl/default.nix b/pkgs/development/interpreters/perl/default.nix index 98de7c71abc..7bc067c92c7 100644 --- a/pkgs/development/interpreters/perl/default.nix +++ b/pkgs/development/interpreters/perl/default.nix @@ -170,14 +170,14 @@ let priority = 6; # in `buildEnv' (including the one inside `perl.withPackages') the library files will have priority over files in `perl` }; } // optionalAttrs (stdenv.buildPlatform != stdenv.hostPlatform) rec { - crossVersion = "01c176ac0f57d40cc3b6f8e441062780f073d952"; # Aug 22, 2021 + crossVersion = "393821c7cf53774233aaf130ff2c8ccec701b0a9"; # Sep 22, 2021 perl-cross-src = fetchFromGitHub { name = "perl-cross-${crossVersion}"; owner = "arsv"; repo = "perl-cross"; rev = crossVersion; - sha256 = "19mwr1snwl4156rlhn74kmpl1wyc7ahhlrjfpnfcj3n63ic0c56y"; + sha256 = "1fn35b1773aibi2z54m0mar7114737mvfyp81wkdwhakrmzr5nv1"; }; depsBuildBuild = [ buildPackages.stdenv.cc makeWrapper ]; @@ -214,7 +214,7 @@ in { perldevel = common { perl = pkgs.perldevel; buildPerl = buildPackages.perldevel; - version = "5.35.3"; - sha256 = "06442zc5rvisl120f58jpy95bkf8f1cc4n577nzihdavlbfmnyyn"; + version = "5.35.4"; + sha256 = "1ss2r0qq5li6d2qghfv1iah5nl6nraymd7b7ib1iy1395rwyhl4q"; }; } diff --git a/pkgs/development/interpreters/racket/default.nix b/pkgs/development/interpreters/racket/default.nix index 5737241bb7e..c49c6b5b7c7 100644 --- a/pkgs/development/interpreters/racket/default.nix +++ b/pkgs/development/interpreters/racket/default.nix @@ -8,6 +8,7 @@ , libGL , libGLU , libjpeg +, xorg , ncurses , libpng, libtool, mpfr, openssl, pango, poppler , readline, sqlite @@ -96,6 +97,9 @@ stdenv.mkDerivation rec { enableParallelBuilding = false; + postFixup = lib.optionalString stdenv.isDarwin '' + wrapProgram $out/bin/drracket --prefix DYLD_LIBRARY_PATH : ${xorg.libX11}/lib + ''; meta = with lib; { description = "A programmable programming language"; @@ -112,6 +116,5 @@ stdenv.mkDerivation rec { license = with licenses; [ asl20 /* or */ mit ]; maintainers = with maintainers; [ kkallio henrytill vrthra ]; platforms = [ "x86_64-darwin" "x86_64-linux" "aarch64-linux" ]; - broken = stdenv.isDarwin; # No support yet for setting FFI lookup path }; } diff --git a/pkgs/development/libraries/capnproto/default.nix b/pkgs/development/libraries/capnproto/default.nix index 3e5a22bf4c8..713a49dbaa6 100644 --- a/pkgs/development/libraries/capnproto/default.nix +++ b/pkgs/development/libraries/capnproto/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl }: +{ lib, stdenv, fetchurl, capnproto, cmake }: stdenv.mkDerivation rec { pname = "capnproto"; @@ -9,6 +9,11 @@ stdenv.mkDerivation rec { sha256 = "sha256-soBUp6K/6kK/w5LI0AljDZTXLozoaiOtbxi15yV0Bk8="; }; + nativeBuildInputs = [ cmake ] + ++ lib.optional (!(stdenv.hostPlatform.isCompatible stdenv.buildPlatform)) capnproto; + + cmakeFlags = lib.optional (!(stdenv.hostPlatform.isCompatible stdenv.buildPlatform)) "-DEXTERNAL_CAPNP"; + meta = with lib; { homepage = "https://capnproto.org/"; description = "Cap'n Proto cerealization protocol"; diff --git a/pkgs/development/libraries/cppzmq/default.nix b/pkgs/development/libraries/cppzmq/default.nix index 7ac6918ef73..e2a16cce7fc 100644 --- a/pkgs/development/libraries/cppzmq/default.nix +++ b/pkgs/development/libraries/cppzmq/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "cppzmq"; - version = "4.8.0"; + version = "4.8.1"; src = fetchFromGitHub { owner = "zeromq"; repo = "cppzmq"; rev = "v${version}"; - sha256 = "sha256-4ZyTp0TOKqDbziqBTkeUs3J+f3stFyUVpkzk4Jx6CDc="; + sha256 = "sha256-Q09+6dPwdeW3jkGgPNAcHI3FHcYPQ+w61PmV+TkQ+H8="; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/grpc/default.nix b/pkgs/development/libraries/grpc/default.nix index 4a9fce04214..2000bdccb00 100644 --- a/pkgs/development/libraries/grpc/default.nix +++ b/pkgs/development/libraries/grpc/default.nix @@ -17,13 +17,13 @@ stdenv.mkDerivation rec { pname = "grpc"; - version = "1.40.0"; # N.B: if you change this, change pythonPackages.grpcio-tools to a matching version too + version = "1.41.0"; # N.B: if you change this, change pythonPackages.grpcio-tools to a matching version too src = fetchFromGitHub { owner = "grpc"; repo = "grpc"; rev = "v${version}"; - sha256 = "08l2dyf3g3zrffy60ycid6jngvhfaghg792yrkfjcpcif5dqfd9f"; + sha256 = "1mcgnzwc2mcdpcfhc1b37vff0biwyd3v0a2ack58wgf4336pzlsb"; fetchSubmodules = true; }; diff --git a/pkgs/development/libraries/libarchive-qt/default.nix b/pkgs/development/libraries/libarchive-qt/default.nix index 920cc7efa08..62b425bba05 100644 --- a/pkgs/development/libraries/libarchive-qt/default.nix +++ b/pkgs/development/libraries/libarchive-qt/default.nix @@ -2,13 +2,13 @@ mkDerivation rec { pname = "libarchive-qt"; - version = "2.0.4"; + version = "2.0.6"; src = fetchFromGitLab { owner = "marcusbritanicus"; repo = pname; rev = "v${version}"; - sha256 = "sha256-onTV9dgk6Yl9H35EvA6/8vk1IrYH8vg9OQNVgzkt4q4"; + sha256 = "sha256-Z+2zjQolV1Ncr6v9r7fGrc/fEMt0iMtGwv9eZ2Tu2cA="; }; nativeBuildInputs = [ diff --git a/pkgs/development/libraries/libcyaml/default.nix b/pkgs/development/libraries/libcyaml/default.nix index 0fabdb49ca1..26ac159646f 100644 --- a/pkgs/development/libraries/libcyaml/default.nix +++ b/pkgs/development/libraries/libcyaml/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "libcyaml"; - version = "1.2.0"; + version = "1.2.1"; src = fetchFromGitHub { owner = "tlsa"; repo = "libcyaml"; rev = "v${version}"; - sha256 = "sha256-LtU1r95YoLuQ2JCphxbMojxKyXnt50XEARGUPftLgsU="; + sha256 = "sha256-u5yLrAXaavALNArj6yw+v5Yn4eqXWTHmUxHe+pVCbXM="; }; buildInputs = [ libyaml ]; diff --git a/pkgs/development/libraries/libfyaml/default.nix b/pkgs/development/libraries/libfyaml/default.nix index dfb540b0bd2..91ec5a5ed06 100644 --- a/pkgs/development/libraries/libfyaml/default.nix +++ b/pkgs/development/libraries/libfyaml/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "libfyaml"; - version = "0.7"; + version = "0.7.1"; src = fetchFromGitHub { owner = "pantoniou"; repo = pname; rev = "v${version}"; - sha256 = "10w1n4zzgw33j755pkv73fxdn93kwbzg486b5m9i0bh5d76jp4ax"; + sha256 = "1367cbny5msapy48z0yysbkawmk1qjqk7cjnqkjszs47riwvjz3h"; }; nativeBuildInputs = [ autoreconfHook pkg-config ]; diff --git a/pkgs/development/libraries/libgpg-error/default.nix b/pkgs/development/libraries/libgpg-error/default.nix index e46e2559336..72d28761323 100644 --- a/pkgs/development/libraries/libgpg-error/default.nix +++ b/pkgs/development/libraries/libgpg-error/default.nix @@ -35,6 +35,8 @@ in stdenv.mkDerivation (rec { ln -s lock-obj-pub.arm-unknown-linux-gnueabi.h src/syscfg/lock-obj-pub.linux-gnueabi.h '' + lib.optionalString (stdenv.hostPlatform.isx86_64 && stdenv.hostPlatform.isMusl) '' ln -s lock-obj-pub.x86_64-pc-linux-musl.h src/syscfg/lock-obj-pub.linux-musl.h + '' + lib.optionalString (stdenv.hostPlatform.isi686 && stdenv.hostPlatform.isMusl) '' + ln -s lock-obj-pub.i686-unknown-linux-gnu.h src/syscfg/lock-obj-pub.linux-musl.h '' + lib.optionalString (stdenv.hostPlatform.isAarch32 && stdenv.hostPlatform.isMusl) '' ln -s src/syscfg/lock-obj-pub.arm-unknown-linux-gnueabi.h src/syscfg/lock-obj-pub.arm-unknown-linux-musleabihf.h ln -s src/syscfg/lock-obj-pub.arm-unknown-linux-gnueabi.h src/syscfg/lock-obj-pub.linux-musleabihf.h diff --git a/pkgs/development/libraries/libnatpmp/default.nix b/pkgs/development/libraries/libnatpmp/default.nix index 11b8d66b4a8..36c1c0dc098 100644 --- a/pkgs/development/libraries/libnatpmp/default.nix +++ b/pkgs/development/libraries/libnatpmp/default.nix @@ -18,6 +18,10 @@ stdenv.mkDerivation rec { makeFlags = [ "INSTALLPREFIX=$(out)" ]; + postFixup = '' + chmod +x $out/lib/* + ''; + meta = with lib; { homepage = "http://miniupnp.free.fr/libnatpmp.html"; description = "NAT-PMP client"; diff --git a/pkgs/development/libraries/libspng/default.nix b/pkgs/development/libraries/libspng/default.nix index 798a9937180..c778ae485bd 100644 --- a/pkgs/development/libraries/libspng/default.nix +++ b/pkgs/development/libraries/libspng/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "libspng"; - version = "0.7.0-rc3"; + version = "0.7.0"; src = fetchFromGitHub { owner = "randy408"; repo = pname; rev = "v${version}"; - sha256 = "0n91mr06sr34cqq91738251iaw21h5c4jgjpn0kqfx69ywxcl9fj"; + sha256 = "0zk0w09is4g7gysax4h0f4xj5f40vm6ipc1wi98ymzban89cjjnz"; }; doCheck = true; diff --git a/pkgs/development/libraries/libytnef/default.nix b/pkgs/development/libraries/libytnef/default.nix index e46064ae56e..f34834ae316 100644 --- a/pkgs/development/libraries/libytnef/default.nix +++ b/pkgs/development/libraries/libytnef/default.nix @@ -4,13 +4,13 @@ with lib; stdenv.mkDerivation rec { pname = "libytnef"; - version = "1.9.3"; + version = "2.0"; src = fetchFromGitHub { owner = "Yeraze"; repo = "ytnef"; rev = "v${version}"; - sha256 = "07h48s5qf08503pp9kafqbwipdqghiif22ghki7z8j67gyp04l6l"; + sha256 = "sha256-P5eTH5pKK+v4LCMAe6JbEbTYOJypmLMYVDYk5tGVZ14="; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/development/libraries/mapnik/default.nix b/pkgs/development/libraries/mapnik/default.nix index c2556a428a1..6fff0c1e1bb 100644 --- a/pkgs/development/libraries/mapnik/default.nix +++ b/pkgs/development/libraries/mapnik/default.nix @@ -96,5 +96,7 @@ stdenv.mkDerivation rec { maintainers = with maintainers; [ hrdinka ]; license = licenses.lgpl21; platforms = platforms.all; + # https://github.com/mapnik/mapnik/issues/4232 + broken = lib.versionAtLeast proj.version "8.0.0"; }; } diff --git a/pkgs/development/libraries/mauikit-filebrowsing/default.nix b/pkgs/development/libraries/mauikit-filebrowsing/default.nix index 1591988e0c0..dd654deb886 100644 --- a/pkgs/development/libraries/mauikit-filebrowsing/default.nix +++ b/pkgs/development/libraries/mauikit-filebrowsing/default.nix @@ -10,14 +10,14 @@ mkDerivation rec { pname = "mauikit-filebrowsing"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitLab { domain = "invent.kde.org"; owner = "maui"; repo = "mauikit-filebrowsing"; rev = "v${version}"; - sha256 = "sha256-hiR0RbZTduH0noyzpewsNJAtSdCtiSmTP8SLMBgK3uA="; + sha256 = "sha256-mpO61VOYTBlAjtIa1gEYChREV2jjd/WG+rbZcJnbM+Q="; }; nativeBuildInputs = [ diff --git a/pkgs/development/libraries/mauikit/default.nix b/pkgs/development/libraries/mauikit/default.nix index 2575e2566a2..f730d848df8 100644 --- a/pkgs/development/libraries/mauikit/default.nix +++ b/pkgs/development/libraries/mauikit/default.nix @@ -9,18 +9,19 @@ , knotifications , qtbase , qtquickcontrols2 +, qtx11extras }: mkDerivation rec { pname = "mauikit"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitLab { domain = "invent.kde.org"; owner = "maui"; repo = "mauikit"; rev = "v${version}"; - sha256 = "sha256-qz/MePMvyGR8lzR2xB2f9QENx04UHu0Xef7v0xcKovo="; + sha256 = "sha256-skukb9M6jhijCTb+tMIz/3vUCAvVJw+4zTFv9Z7HqWk="; }; nativeBuildInputs = [ @@ -34,6 +35,7 @@ mkDerivation rec { ki18n knotifications qtquickcontrols2 + qtx11extras ]; meta = with lib; { diff --git a/pkgs/development/libraries/notcurses/default.nix b/pkgs/development/libraries/notcurses/default.nix index 6d12ed6ef1b..8be2fe9fe8d 100644 --- a/pkgs/development/libraries/notcurses/default.nix +++ b/pkgs/development/libraries/notcurses/default.nix @@ -14,13 +14,13 @@ stdenv.mkDerivation rec { pname = "notcurses"; - version = "2.4.1"; + version = "2.4.2"; src = fetchFromGitHub { owner = "dankamongmen"; repo = "notcurses"; rev = "v${version}"; - sha256 = "sha256-Oyjdmmb+rqPgkwVJw3y4NKGPABmCZFyGFBzBJn6IEHk="; + sha256 = "sha256-EtHyxnTH2bVoVnWB9wvmF/nCdecvL1TTiVRaajFVC/0="; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/nsss/default.nix b/pkgs/development/libraries/nsss/default.nix index 527e7d4898e..9fee8333fb3 100644 --- a/pkgs/development/libraries/nsss/default.nix +++ b/pkgs/development/libraries/nsss/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "nsss"; - version = "0.1.0.1"; - sha256 = "1nair10m7fddp50mpqnwj0qiggnh5qmnffmyzxis5l1ixcav1ir0"; + version = "0.2.0.0"; + sha256 = "0zg0lwkvx9ch4a6h9ryc73nqfz733v2pv4gbf65qzpz7ccniwagi"; description = "An implementation of a subset of the pwd.h, group.h and shadow.h family of functions."; diff --git a/pkgs/development/libraries/opencv/default.nix b/pkgs/development/libraries/opencv/default.nix index 005257780e4..ed2f700dc82 100644 --- a/pkgs/development/libraries/opencv/default.nix +++ b/pkgs/development/libraries/opencv/default.nix @@ -9,6 +9,7 @@ , enableFfmpeg ? false, ffmpeg , enableGStreamer ? false, gst_all_1 , enableEigen ? true, eigen +, enableUnfree ? false , Cocoa, QTKit }: @@ -67,7 +68,7 @@ stdenv.mkDerivation rec { (opencvFlag "PNG" enablePNG) (opencvFlag "OPENEXR" enableEXR) (opencvFlag "GSTREAMER" enableGStreamer) - ]; + ] ++ lib.optional (!enableUnfree) "-DBUILD_opencv_nonfree=OFF"; hardeningDisable = [ "bindnow" "relro" ]; @@ -82,7 +83,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Open Computer Vision Library with more than 500 algorithms"; homepage = "https://opencv.org/"; - license = licenses.bsd3; + license = if enableUnfree then licenses.unfree else licenses.bsd3; maintainers = with maintainers; [ ]; platforms = platforms.linux; }; diff --git a/pkgs/development/libraries/openvino/default.nix b/pkgs/development/libraries/openvino/default.nix index b4e48788799..86bc3b0d009 100644 --- a/pkgs/development/libraries/openvino/default.nix +++ b/pkgs/development/libraries/openvino/default.nix @@ -3,6 +3,7 @@ , autoPatchelfHook , stdenv , fetchFromGitHub +, fetchpatch , cmake , git , protobuf @@ -10,17 +11,29 @@ , opencv , unzip , shellcheck +, srcOnly , python , enablePython ? false }: let - onnx_src = fetchFromGitHub { - owner = "onnx"; - repo = "onnx"; - rev = "v1.8.1"; - sha256 = "+1zNnZ4lAyVYRptfk0PV7koIX9FqcfD1Ah33qj/G2rA="; + onnx_src = srcOnly { + name = "onnx-patched"; + src = fetchFromGitHub { + owner = "onnx"; + repo = "onnx"; + rev = "v1.8.1"; + sha256 = "+1zNnZ4lAyVYRptfk0PV7koIX9FqcfD1Ah33qj/G2rA="; + }; + patches = [ + # Fix build with protobuf 3.18+ + # Remove with onnx 1.9 release + (fetchpatch { + url = "https://github.com/onnx/onnx/commit/d3bc82770474761571f950347560d62a35d519d7.patch"; + sha256 = "0vdsrklkzhdjaj8wdsl4icn93q3961g8dx35zvff0nhpr08wjb7y"; + }) + ]; }; in diff --git a/pkgs/development/libraries/proj/7.nix b/pkgs/development/libraries/proj/7.nix new file mode 100644 index 00000000000..3eb4789939f --- /dev/null +++ b/pkgs/development/libraries/proj/7.nix @@ -0,0 +1,58 @@ +{ lib +, stdenv +, fetchFromGitHub +, cmake +, pkg-config +, sqlite +, libtiff +, curl +, gtest +, fetchpatch +}: + +stdenv.mkDerivation rec { + pname = "proj"; + version = "7.2.1"; + + src = fetchFromGitHub { + owner = "OSGeo"; + repo = "PROJ"; + rev = version; + sha256 = "0mymvfvs8xggl4axvlj7kc1ksd9g94kaz6w1vdv0x2y5mqk93gx9"; + }; + + patches = [ + (fetchpatch { # https://github.com/OSGeo/PROJ/issues/2557 + name = "gie_self_tests-fail.diff"; # included in >= 8.0.1 + url = "https://github.com/OSGeo/PROJ/commit/6f1a3c4648bf06862dca0b3725cbb3b7ee0284e3.diff"; + sha256 = "0gapny0a9c3r0x9szjgn86sspjrrf4vwbija77b17w6ci5cq4pdf"; + }) + ]; + + postPatch = lib.optionalString (version == "7.2.1") '' + substituteInPlace CMakeLists.txt \ + --replace "MAJOR 7 MINOR 2 PATCH 0" "MAJOR 7 MINOR 2 PATCH 1" + ''; + + outputs = [ "out" "dev"]; + + nativeBuildInputs = [ cmake pkg-config ]; + + buildInputs = [ sqlite libtiff curl ]; + + checkInputs = [ gtest ]; + + cmakeFlags = [ + "-DUSE_EXTERNAL_GTEST=ON" + ]; + + doCheck = true; + + meta = with lib; { + description = "Cartographic Projections Library"; + homepage = "https://proj4.org"; + license = licenses.mit; + platforms = platforms.unix; + maintainers = with maintainers; [ vbgl dotlambda ]; + }; +} diff --git a/pkgs/development/libraries/proj/default.nix b/pkgs/development/libraries/proj/default.nix index f22878ec829..caa270bcf60 100644 --- a/pkgs/development/libraries/proj/default.nix +++ b/pkgs/development/libraries/proj/default.nix @@ -7,33 +7,19 @@ , libtiff , curl , gtest -, fetchpatch }: stdenv.mkDerivation rec { pname = "proj"; - version = "7.2.1"; + version = "8.1.1"; src = fetchFromGitHub { owner = "OSGeo"; repo = "PROJ"; rev = version; - sha256 = "0mymvfvs8xggl4axvlj7kc1ksd9g94kaz6w1vdv0x2y5mqk93gx9"; + sha256 = "sha256-Z2nruyowC3NG4Wb8AFBL0PME/zp9D7SwQdMSl6VjH/w="; }; - patches = [ - (fetchpatch { # https://github.com/OSGeo/PROJ/issues/2557 - name = "gie_self_tests-fail.diff"; # included in >= 8.0.1 - url = "https://github.com/OSGeo/PROJ/commit/6f1a3c4648bf06862dca0b3725cbb3b7ee0284e3.diff"; - sha256 = "0gapny0a9c3r0x9szjgn86sspjrrf4vwbija77b17w6ci5cq4pdf"; - }) - ]; - - postPatch = lib.optionalString (version == "7.2.1") '' - substituteInPlace CMakeLists.txt \ - --replace "MAJOR 7 MINOR 2 PATCH 0" "MAJOR 7 MINOR 2 PATCH 1" - ''; - outputs = [ "out" "dev"]; nativeBuildInputs = [ cmake pkg-config ]; @@ -44,17 +30,14 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DUSE_EXTERNAL_GTEST=ON" + "-DRUN_NETWORK_DEPENDENT_TESTS=OFF" ]; - doCheck = stdenv.is64bit; - - preCheck = '' - export HOME=$TMPDIR - ''; + doCheck = true; meta = with lib; { description = "Cartographic Projections Library"; - homepage = "https://proj4.org"; + homepage = "https://proj.org/"; license = licenses.mit; platforms = platforms.unix; maintainers = with maintainers; [ vbgl dotlambda ]; diff --git a/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix b/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix index 4589a2fde18..f25173c41c9 100644 --- a/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix +++ b/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "qtstyleplugin-kvantum"; - version = "0.20.1"; + version = "0.20.2"; src = fetchFromGitHub { owner = "tsujan"; repo = "Kvantum"; rev = "V${version}"; - sha256 = "0rj7zfm2h6812ga1xypism8a48jj669nh10jmhpf2mjriyaar3di"; + sha256 = "145wm8c5v56djmvgjhksmywx6ak81vhxyg6yy3jj7wlvcan4p238"; }; nativeBuildInputs = [ diff --git a/pkgs/development/libraries/re2/default.nix b/pkgs/development/libraries/re2/default.nix index 9b7a2e91011..d2942e6be2a 100644 --- a/pkgs/development/libraries/re2/default.nix +++ b/pkgs/development/libraries/re2/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "re2"; - version = "2021-04-01"; + version = "2021-09-01"; src = fetchFromGitHub { owner = "google"; repo = "re2"; rev = version; - sha256 = "1iia0883lssj7ckbsr0n7yb3gdw24c8wnl2q5hhzlml23h4ipbh3"; + sha256 = "1fyhypw345xz8zdh53gz6j1fwgrx0gszk1d349ja37dpxh4jp2jh"; }; preConfigure = '' diff --git a/pkgs/development/libraries/science/math/tensorflow/bin.nix b/pkgs/development/libraries/science/math/tensorflow/bin.nix index d42026c13cf..b57d1191933 100644 --- a/pkgs/development/libraries/science/math/tensorflow/bin.nix +++ b/pkgs/development/libraries/science/math/tensorflow/bin.nix @@ -1,7 +1,7 @@ { lib, stdenv , fetchurl , addOpenGLRunpath -, cudaSupport ? false, symlinkJoin, cudatoolkit, cudnn, nvidia_x11 +, cudaSupport ? false, symlinkJoin, cudatoolkit, cudnn }: with lib; @@ -17,7 +17,7 @@ let platform = "x86_64"; rpath = makeLibraryPath ([stdenv.cc.libc stdenv.cc.cc.lib] - ++ optionals cudaSupport [ cudatoolkit.out cudatoolkit.lib cudnn nvidia_x11 ]); + ++ optionals cudaSupport [ cudatoolkit.out cudatoolkit.lib cudnn ]); packages = import ./binary-hashes.nix; diff --git a/pkgs/development/libraries/skalibs/2_10.nix b/pkgs/development/libraries/skalibs/2_10.nix new file mode 100644 index 00000000000..af4c04dab1e --- /dev/null +++ b/pkgs/development/libraries/skalibs/2_10.nix @@ -0,0 +1,31 @@ +{ skawarePackages }: + +skawarePackages.buildPackage { + pname = "skalibs"; + version = "2.10.0.3"; + sha256 = "0ka6n5rnxd5sn5lycarf596d5wlak5s535zqqlz0rnhdcnpb105p"; + + description = "A set of general-purpose C programming libraries"; + + outputs = [ "lib" "dev" "doc" "out" ]; + + configureFlags = [ + # assume /dev/random works + "--enable-force-devr" + "--libdir=\${lib}/lib" + "--dynlibdir=\${lib}/lib" + "--includedir=\${dev}/include" + "--sysdepdir=\${lib}/lib/skalibs/sysdeps" + # Empty the default path, which would be "/usr/bin:bin". + # It would be set when PATH is empty. This hurts hermeticity. + "--with-default-path=" + ]; + + postInstall = '' + rm -rf sysdeps.cfg + rm libskarnet.* + + mv doc $doc/share/doc/skalibs/html + ''; + +} diff --git a/pkgs/development/libraries/skalibs/default.nix b/pkgs/development/libraries/skalibs/default.nix index 09530db0532..7e3e457d503 100644 --- a/pkgs/development/libraries/skalibs/default.nix +++ b/pkgs/development/libraries/skalibs/default.nix @@ -1,11 +1,11 @@ -{ skawarePackages }: +{ skawarePackages, pkgs }: with skawarePackages; buildPackage { pname = "skalibs"; - version = "2.10.0.3"; - sha256 = "0ka6n5rnxd5sn5lycarf596d5wlak5s535zqqlz0rnhdcnpb105p"; + version = "2.11.0.0"; + sha256 = "1n9l7mb54dlb0iijjaf446jba6nmq1ql9n39s095ngrk5ahcipwq"; description = "A set of general-purpose C programming libraries"; @@ -30,4 +30,10 @@ buildPackage { mv doc $doc/share/doc/skalibs/html ''; + passthru.tests = { + # fdtools is one of the few non-skalib packages that depends on skalibs + # and might break if skalibs gets an breaking update. + fdtools = pkgs.fdtools; + }; + } diff --git a/pkgs/development/libraries/utmps/default.nix b/pkgs/development/libraries/utmps/default.nix index be74748cb36..fcf032b2650 100644 --- a/pkgs/development/libraries/utmps/default.nix +++ b/pkgs/development/libraries/utmps/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "utmps"; - version = "0.1.0.2"; - sha256 = "1vjza7m65ziq54q0sv46kb3lss9cmxkkv0n9h3i8505x0h2hlvlb"; + version = "0.1.0.3"; + sha256 = "0npgg90lzxmhld6hp296gbnrsixip28s7axirc2g6yjpjz2bvcan"; description = "A secure utmpx and wtmp implementation"; diff --git a/pkgs/development/libraries/valhalla/default.nix b/pkgs/development/libraries/valhalla/default.nix index 6eac19bcb2c..b3d61e6efd7 100644 --- a/pkgs/development/libraries/valhalla/default.nix +++ b/pkgs/development/libraries/valhalla/default.nix @@ -14,6 +14,15 @@ stdenv.mkDerivation rec { fetchSubmodules = true; }; + # https://github.com/valhalla/valhalla/issues/2119 + postPatch = '' + for f in valhalla/mjolnir/transitpbf.h \ + src/mjolnir/valhalla_query_transit.cc; do + substituteInPlace $f --replace 'SetTotalBytesLimit(limit, limit)' \ + 'SetTotalBytesLimit(limit)' + done + ''; + nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ zlib curl protobuf prime-server boost sqlite libspatialite diff --git a/pkgs/development/lua-modules/generated-packages.nix b/pkgs/development/lua-modules/generated-packages.nix index 06020551513..441f83d10c0 100644 --- a/pkgs/development/lua-modules/generated-packages.nix +++ b/pkgs/development/lua-modules/generated-packages.nix @@ -23,6 +23,7 @@ alt-getopt = buildLuarocksPackage { "date": "2017-01-06T13:50:55+03:00", "path": "/nix/store/z72v77cw9188408ynsppwhlzii2dr740-lua-alt-getopt", "sha256": "1kq7r5668045diavsqd1j6i9hxdpsk99w8q4zr8cby9y3ws4q6rv", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -50,6 +51,7 @@ argparse = buildLuarocksPackage { "date": "2020-07-08T11:17:50+10:00", "path": "/nix/store/vjm6c826hgvj7h7vqlbgkfpvijsd8yaf-argparse", "sha256": "0idg79d0dfis4qhbkbjlmddq87np75hb2vj41i6prjpvqacvg5v1", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -119,6 +121,7 @@ bit32 = buildLuarocksPackage { "date": "2015-02-17T10:44:04+01:00", "path": "/nix/store/9kz7kgjmq0w9plrpha866bmwsgp4rfhn-lua-compat-5.2", "sha256": "1ipqlbvb5w394qwhm2f3w6pdrgy8v4q8sps5hh3pqz14dcqwakhj", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -171,7 +174,8 @@ cassowary = buildLuarocksPackage { "date": "2021-07-19T14:37:34+03:00", "path": "/nix/store/rzsbr6gqg8vhchl24ma3p1h4slhk0xp7-cassowary.lua", "sha256": "1r668qcvd2a1rx17xp7ajp5wjhyvh2fwn0c60xmw0mnarjb5w1pq", - "fetchSubmodules": false, + "fetchLFS": false, + "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false } @@ -179,10 +183,6 @@ cassowary = buildLuarocksPackage { disabled = (luaOlder "5.1"); propagatedBuildInputs = [ lua penlight ]; - checkInputs = [ busted ]; - # Avoid circular dependency issue with busted / penlight, see: - # https://github.com/NixOS/nixpkgs/pull/136453/files#r700982255 - doCheck = false; meta = { homepage = "https://github.com/sile-typesetter/cassowary.lua"; @@ -196,7 +196,7 @@ compat53 = buildLuarocksPackage { pname = "compat53"; version = "0.7-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/compat53-0.7-1.rockspec"; + url = "https://luafr.org/luarocks/compat53-0.7-1.rockspec"; sha256 = "1r7a3q1cjrcmdycrv2ikgl83irjhxs53sa88v2fdpr9aaamlb101"; }).outPath; src = fetchurl { @@ -228,6 +228,7 @@ cosmo = buildLuarocksPackage { "date": "2016-06-17T05:39:58-07:00", "path": "/nix/store/k3p4xc4cfihp4h8aj6vacr25rpcsjd96-cosmo", "sha256": "03b5gwsgxd777970d2h6rx86p7ivqx7bry8xmx2r396g3w85qy2p", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -257,6 +258,7 @@ coxpcall = buildLuarocksPackage { "date": "2018-02-26T19:53:11-03:00", "path": "/nix/store/1q4p5qvr6rlwisyarlgnmk4dx6vp8xdl-coxpcall", "sha256": "1k3q1rr2kavkscf99b5njxhibhp6iwhclrjk6nnnp233iwc2jvqi", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -304,6 +306,7 @@ cyrussasl = buildLuarocksPackage { "date": "2015-08-21T18:24:54-04:00", "path": "/nix/store/s7n7f80pz8k6lvfav55a5rwy5l45vs4l-lua-cyrussasl", "sha256": "14kzm3vk96k2i1m9f5zvpvq4pnzaf7s91h5g4h4x2bq1mynzw2s1", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -326,10 +329,11 @@ digestif = buildLuarocksPackage { src = fetchgit ( removeAttrs (builtins.fromJSON ''{ "url": "https://github.com/astoff/digestif", - "rev": "3a9076f76d8121526adcdbb9303d04dd3c721a34", - "date": "2021-06-24T16:18:41+02:00", - "path": "/nix/store/alzrvcxdmdfqqmm0diaxfljyr3jz1zk3-digestif", - "sha256": "110vsqyyp2pvn6nk492a9r56iyzymy0w1f2hvx26pv5x01mxm20x", + "rev": "9f8f299cf7094d72edbd32a455869751246028b7", + "date": "2021-09-25T14:32:42+02:00", + "path": "/nix/store/ln1zx9cw2b7q4x5vzd6hv5nd01c1gsy3-digestif", + "sha256": "1cf14m03jvfs1mwaywfgv759jh0ha3pxrnyj7jxjxlsj6cim89v0", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -395,10 +399,11 @@ gitsigns-nvim = buildLuarocksPackage { src = fetchgit ( removeAttrs (builtins.fromJSON ''{ "url": "https://github.com/lewis6991/gitsigns.nvim", - "rev": "daa233aabb4dbc7c870ea7300bcfeef96d49c2a3", - "date": "2021-08-29T23:08:52+01:00", - "path": "/nix/store/4685c871dzh0kqf3fs5iqmaysag4m9nx-gitsigns.nvim", - "sha256": "0y0il8v0g8kvsyzir4hbkwvzv9wk2iqs1apxlvijk9ccfdk9ya0p", + "rev": "7e5c1a831f555dc398dd1564489e2b8a5c867754", + "date": "2021-09-25T16:49:34+01:00", + "path": "/nix/store/a1h8xxb9w4kvvmq7q30m1ny2pq3zbmin-gitsigns.nvim", + "sha256": "02kssw0lpprf9k3il6gfd00gj9fbjbksipa4f6xqkgfdq5c9l9fr", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -419,7 +424,7 @@ http = buildLuarocksPackage { pname = "http"; version = "0.3-0"; knownRockspec = (fetchurl { - url = "https://luarocks.org/http-0.3-0.rockspec"; + url = "https://luafr.org/luarocks/http-0.3-0.rockspec"; sha256 = "0fn3irkf5nnmfc83alc40b316hs8l7zdq2xlaiaa65sjd8acfvia"; }).outPath; src = fetchurl { @@ -442,7 +447,7 @@ inspect = buildLuarocksPackage { pname = "inspect"; version = "3.1.1-0"; knownRockspec = (fetchurl { - url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/inspect-3.1.1-0.rockspec"; + url = "https://luarocks.org/inspect-3.1.1-0.rockspec"; sha256 = "00spibq2h4an8v0204vr1hny4vv6za720c37ipsahpjk198ayf1p"; }).outPath; src = fetchurl { @@ -473,6 +478,7 @@ ldbus = buildLuarocksPackage { "date": "2019-08-16T14:26:05+10:00", "path": "/nix/store/gg4zldd6kx048d6p65b9cimg3arma8yh-ldbus", "sha256": "06wcz4i5b7kphqbry274q3ivnsh331rxiyf7n4qk3zx2kvarq08s", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -499,6 +505,7 @@ ldoc = buildLuarocksPackage { "date": "2021-06-24T13:07:51+02:00", "path": "/nix/store/pzk1qi4fdviz2pq5bg3q91jmrg8wziqx-LDoc", "sha256": "05wd5m5v3gv777kgikj46216slxyf1zdbzl4idara9lcfw3mfyyw", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -527,6 +534,7 @@ lgi = buildLuarocksPackage { "date": "2017-10-09T20:55:55+02:00", "path": "/nix/store/vh82n8pc8dy5c8nph0vssk99vv7q4qg2-lgi", "sha256": "03rbydnj411xpjvwsyvhwy4plm96481d7jax544mvk7apd8sd5jj", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -655,7 +663,7 @@ lpty = buildLuarocksPackage { pname = "lpty"; version = "1.2.2-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/lpty-1.2.2-1.rockspec"; + url = "https://luafr.org/luarocks/lpty-1.2.2-1.rockspec"; sha256 = "04af4mhiqrw3br4qzz7yznw9zy2m50wddwzgvzkvhd99ng71fkzg"; }).outPath; src = fetchurl { @@ -677,7 +685,7 @@ lrexlib-gnu = buildLuarocksPackage { pname = "lrexlib-gnu"; version = "2.9.1-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/lrexlib-gnu-2.9.1-1.rockspec"; + url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/lrexlib-gnu-2.9.1-1.rockspec"; sha256 = "1jfjxh26iwsavipkwmscwv52l77qxzvibfmlvpskcpawyii7xcw8"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -686,6 +694,7 @@ lrexlib-gnu = buildLuarocksPackage { "date": "2020-08-07T12:10:29+03:00", "path": "/nix/store/vnnhcc0r9zhqwshmfzrn0ryai61l6xrd-lrexlib", "sha256": "15dsxq0363940rij9za8mc224n9n58i2iqw1z7r1jh3qpkaciw7j", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -715,6 +724,7 @@ lrexlib-pcre = buildLuarocksPackage { "date": "2020-08-07T12:10:29+03:00", "path": "/nix/store/vnnhcc0r9zhqwshmfzrn0ryai61l6xrd-lrexlib", "sha256": "15dsxq0363940rij9za8mc224n9n58i2iqw1z7r1jh3qpkaciw7j", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -736,7 +746,7 @@ lrexlib-posix = buildLuarocksPackage { pname = "lrexlib-posix"; version = "2.9.1-1"; knownRockspec = (fetchurl { - url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/lrexlib-posix-2.9.1-1.rockspec"; + url = "https://luafr.org/luarocks/lrexlib-posix-2.9.1-1.rockspec"; sha256 = "1zxrx9yifm9ry4wbjgv86rlvq3ff6qivldvib3ha4767azla0j0r"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -745,6 +755,7 @@ lrexlib-posix = buildLuarocksPackage { "date": "2020-08-07T12:10:29+03:00", "path": "/nix/store/vnnhcc0r9zhqwshmfzrn0ryai61l6xrd-lrexlib", "sha256": "15dsxq0363940rij9za8mc224n9n58i2iqw1z7r1jh3qpkaciw7j", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -774,6 +785,7 @@ lua-cjson = buildLuarocksPackage { "date": "2018-04-19T12:03:43-07:00", "path": "/nix/store/qdpqx2g0xi1c9fknzxx280mcdq6fi8rw-lua-cjson", "sha256": "0i2sjsi6flax1k0bm647yijgmc02jznq9bn88mj71pgii79pfjhw", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -803,6 +815,7 @@ lua-cmsgpack = buildLuarocksPackage { "date": "2015-06-03T08:39:04+02:00", "path": "/nix/store/ksqvl7hbd5s7nb6hjffyic1shldac4z2-lua-cmsgpack", "sha256": "0j0ahc9rprgl6dqxybaxggjam2r5i2wqqsd6764n0d7fdpj9fqm0", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -854,6 +867,7 @@ lua-lsp = buildLuarocksPackage { "date": "2020-10-17T15:07:11-04:00", "path": "/nix/store/qn9syhm875k1qardhhsp025cm3dbnqvm-lua-lsp", "sha256": "17k3jq61jz6j9bz4vc3hmsfx1s26cfgq1acja8fqyixljklmsbqp", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -905,6 +919,7 @@ lua-resty-http = buildLuarocksPackage { "date": "2021-04-09T17:11:35+01:00", "path": "/nix/store/zzd1xj4r0iy3srs2hgv4mlm6wflmk24x-lua-resty-http", "sha256": "1whwn2fwm8c9jda4z1sb5636sfy4pfgjdxw0grcgmf6451xi57nw", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -934,6 +949,7 @@ lua-resty-jwt = buildLuarocksPackage { "date": "2021-01-20T16:53:57-05:00", "path": "/nix/store/z4a8ffxj2i3gbjp0f8r377cdp88lkzl4-lua-resty-jwt", "sha256": "07w8r8gqbby06x493qzislig7a3giw0anqr4ivp3g2ms8v9fnng6", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -954,7 +970,7 @@ lua-resty-openidc = buildLuarocksPackage { pname = "lua-resty-openidc"; version = "1.7.4-1"; knownRockspec = (fetchurl { - url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/lua-resty-openidc-1.7.4-1.rockspec"; + url = "https://luarocks.org/lua-resty-openidc-1.7.4-1.rockspec"; sha256 = "12r03pzx1lpaxzy71iqh0kf1zs6gx1k89vpxc5va9r7nr47a56vy"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -963,6 +979,7 @@ lua-resty-openidc = buildLuarocksPackage { "date": "2020-11-17T17:42:16+01:00", "path": "/nix/store/240kss5xx1br5n3qz6djw21cs1fj4pfg-lua-resty-openidc", "sha256": "1gw71av1r0c6v4f1h0bj0l6way2hmipic6wmipnavr17bz7m1q7z", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -981,17 +998,18 @@ lua-resty-openidc = buildLuarocksPackage { lua-resty-openssl = buildLuarocksPackage { pname = "lua-resty-openssl"; - version = "0.7.4-1"; + version = "0.7.5-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/lua-resty-openssl-0.7.4-1.rockspec"; - sha256 = "1h87nc8rnay2h0hcc9rylkdzrssibjs6whyim53k647wqkm3fslm"; + url = "https://luafr.org/luarocks/lua-resty-openssl-0.7.5-1.rockspec"; + sha256 = "13v14in9cgmjgarmy6br9629ns1qlhw7a30c061y6gncjannnv6y"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ "url": "https://github.com/fffonion/lua-resty-openssl.git", - "rev": "5b113a6059e63dbcf7c6fa95a149a9381b904219", - "date": "2021-08-02T18:09:14+08:00", - "path": "/nix/store/qk6fcp5hwqsm4mday34l1mdkx0ba76bx-lua-resty-openssl", - "sha256": "1iar6znh0i45zkx03n8vrkwhx732158hmxfmfjgbpv547mh30ly6", + "rev": "6a7f4a1649da7e0499b542b73c61e8dbdf91f57e", + "date": "2021-09-18T06:15:54+08:00", + "path": "/nix/store/01bninsbgix30zl97lk0p10ycqkc37kx-lua-resty-openssl", + "sha256": "1ypji678lna9z3a48lhxs7wrw8d1prln7yfvqfm96lbmfvr5wfxw", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1019,6 +1037,7 @@ lua-resty-session = buildLuarocksPackage { "date": "2021-01-04T14:02:41+02:00", "path": "/nix/store/jqc8arr46mx1xbmrsw503zza1kmz7mcv-lua-resty-session", "sha256": "09q8xbxkr431i2k21vdyx740rv325v0zmnx0qa3q9x15kcfsd2fm", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1068,6 +1087,7 @@ lua-toml = buildLuarocksPackage { "date": "2017-12-08T16:30:50-08:00", "path": "/nix/store/cnpflpyj441c65jhb68hjr2bcvnj9han-lua-toml", "sha256": "0lklhgs4n7gbgva5frs39240da1y4nwlx6yxaj3ix6r5lp9sh07b", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1097,6 +1117,7 @@ lua-yajl = buildLuarocksPackage { "date": "2020-11-12T06:22:23-08:00", "path": "/nix/store/9acgxpqk52kwn03m5xasn4f6mmsby2r9-lua-yajl", "sha256": "1frry90y7vqnw1rd1dfnksilynh0n24gfhkmjd6wwba73prrg0pf", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1118,7 +1139,7 @@ lua-zlib = buildLuarocksPackage { pname = "lua-zlib"; version = "1.2-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/lua-zlib-1.2-1.rockspec"; + url = "https://luafr.org/luarocks/lua-zlib-1.2-1.rockspec"; sha256 = "18rpbg9b4vsnh3svapiqrvwwshw1abb5l5fd7441byx1nm3fjq9w"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -1127,6 +1148,7 @@ lua-zlib = buildLuarocksPackage { "date": "2017-10-07T08:26:37-07:00", "path": "/nix/store/6hjfczd3xkilkdxidgqzdrwmaiwnlf05-lua-zlib", "sha256": "1cv12s5c5lihmf3hb0rz05qf13yihy1bjpb7448v8mkiss6y1s5c", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1173,6 +1195,7 @@ luabitop = buildLuarocksPackage { "date": "2021-08-30T10:14:03+02:00", "path": "/nix/store/sdnza0zpmlkz9jppnysasbvqy29f4zia-luabitop", "sha256": "1b57f99lrjbwsi4m23cq5kpj0dbpxh3xwr0mxs2rzykr2ijpgwrw", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1202,6 +1225,7 @@ luacheck = buildLuarocksPackage { "date": "2020-08-20T19:21:52-03:00", "path": "/nix/store/8r4x8snxp0kjabn9bsxwh62pfczd8wma-luacheck", "sha256": "08jsqibksdvpl6mvf8d6rlh5pii78hqm3fkhbkgzrs6k8kk5a7lf", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1222,7 +1246,7 @@ luacov = buildLuarocksPackage { pname = "luacov"; version = "0.15.0-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/luacov-0.15.0-1.rockspec"; + url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/luacov-0.15.0-1.rockspec"; sha256 = "18byfl23c73pazi60hsx0vd74hqq80mzixab76j36cyn8k4ni9db"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -1231,6 +1255,7 @@ luacov = buildLuarocksPackage { "date": "2021-02-15T18:47:58-03:00", "path": "/nix/store/9vm38il9knzx2m66m250qj1fzdfzqg0y-luacov", "sha256": "08550nna6qcb5jn6ds1hjm6010y8973wx4qbf9vrvrcn1k2yr6ki", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1260,6 +1285,7 @@ luadbi = buildLuarocksPackage { "date": "2019-01-14T09:39:17+00:00", "path": "/nix/store/a3qgawila4r4jc2lpdc4mwyzd1gvzazd-luadbi", "sha256": "167ivwmczhp98bxzpz3wdxcfj6vi0a10gpi7rdfjs2rbfwkzqvjh", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1280,7 +1306,7 @@ luadbi-mysql = buildLuarocksPackage { pname = "luadbi-mysql"; version = "0.7.2-1"; knownRockspec = (fetchurl { - url = "https://luarocks.org/luadbi-mysql-0.7.2-1.rockspec"; + url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/luadbi-mysql-0.7.2-1.rockspec"; sha256 = "0gnyqnvcfif06rzzrdw6w6hchp4jrjiwm0rmfx2r8ljchj2bvml5"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -1289,6 +1315,7 @@ luadbi-mysql = buildLuarocksPackage { "date": "2019-01-14T09:39:17+00:00", "path": "/nix/store/a3qgawila4r4jc2lpdc4mwyzd1gvzazd-luadbi", "sha256": "167ivwmczhp98bxzpz3wdxcfj6vi0a10gpi7rdfjs2rbfwkzqvjh", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1318,6 +1345,7 @@ luadbi-postgresql = buildLuarocksPackage { "date": "2019-01-14T09:39:17+00:00", "path": "/nix/store/a3qgawila4r4jc2lpdc4mwyzd1gvzazd-luadbi", "sha256": "167ivwmczhp98bxzpz3wdxcfj6vi0a10gpi7rdfjs2rbfwkzqvjh", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1347,6 +1375,7 @@ luadbi-sqlite3 = buildLuarocksPackage { "date": "2019-01-14T09:39:17+00:00", "path": "/nix/store/a3qgawila4r4jc2lpdc4mwyzd1gvzazd-luadbi", "sha256": "167ivwmczhp98bxzpz3wdxcfj6vi0a10gpi7rdfjs2rbfwkzqvjh", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1367,7 +1396,7 @@ luaepnf = buildLuarocksPackage { pname = "luaepnf"; version = "0.3-2"; knownRockspec = (fetchurl { - url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/luaepnf-0.3-2.rockspec"; + url = "https://luafr.org/luarocks/luaepnf-0.3-2.rockspec"; sha256 = "0kqmnj11wmfpc9mz04zzq8ab4mnbkrhcgc525wrq6pgl3p5li8aa"; }).outPath; src = fetchgit ( removeAttrs (builtins.fromJSON ''{ @@ -1376,6 +1405,7 @@ luaepnf = buildLuarocksPackage { "date": "2015-01-15T16:54:10+01:00", "path": "/nix/store/n7gb0z26sl7dzdyy3bx1y3cz3npsna7d-lua-luaepnf", "sha256": "1lvsi3fklhvz671jgg0iqn0xbkzn9qjcbf2ks41xxjz3lapjr6c9", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1450,6 +1480,7 @@ luaffi = buildLuarocksPackage { "date": "2021-03-01T11:46:30-05:00", "path": "/nix/store/6dwfn64p3clcsxkq41b307q8izi0fvji-luaffifb", "sha256": "0nj76fw3yi57vfn35yvbdmpdbg9gmn5j1gw84ajs9w1j86sc0661", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1479,6 +1510,7 @@ luafilesystem = buildLuarocksPackage { "date": "2017-09-15T20:07:33-03:00", "path": "/nix/store/20xm4942kvnb8kypg76jl7zrym5cz03c-luafilesystem", "sha256": "0zmprgkm9zawdf9wnw0v3w6ibaj442wlc6alp39hmw610fl4vghi", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1509,6 +1541,7 @@ lualogging = buildLuarocksPackage { "date": "2021-08-12T19:29:39+02:00", "path": "/nix/store/q1v28n04hh3r7aw37cxakzksfa3kw5qa-lualogging", "sha256": "0nj0ik91lgl9rwgizdkn7vy9brddsz1kxfn70c01x861vaxi63iz", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1603,6 +1636,7 @@ luasec = buildLuarocksPackage { "date": "2021-08-14T10:28:09-03:00", "path": "/nix/store/jk2npg54asnmj5fnpldn8dxym9gx8x4g-luasec", "sha256": "14hx72qw3gjgz12v5bwpz3irgbf69f8584z8y7lglccbyydp4jla", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1655,6 +1689,7 @@ luasql-sqlite3 = buildLuarocksPackage { "date": "2021-08-27T15:17:22-03:00", "path": "/nix/store/2374agarn72cnlnk2vripfy1zz2y50la-luasql", "sha256": "13xs1g67d2p69x4wzxk1h97xh25388h0kkh9bjgw3l1yss9zlxhx", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1720,7 +1755,7 @@ luautf8 = buildLuarocksPackage { pname = "luautf8"; version = "0.1.3-1"; knownRockspec = (fetchurl { - url = "https://raw.githubusercontent.com/rocks-moonscript-org/moonrocks-mirror/master/luautf8-0.1.3-1.rockspec"; + url = "https://luarocks.org/luautf8-0.1.3-1.rockspec"; sha256 = "16i9wfgd0f299g1afgjp0hhczlrk5g8i0kq3ka0f8bwj3mp2wmcp"; }).outPath; src = fetchurl { @@ -1752,6 +1787,7 @@ luazip = buildLuarocksPackage { "date": "2017-09-05T14:02:52+03:00", "path": "/nix/store/idllj442c0iwnx1cpkrifx2afb7vh821-luazip", "sha256": "1jlqzqlds3aa3hnp737fm2awcx0hzmwyd87klv0cv13ny5v9f2x4", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1792,14 +1828,14 @@ luuid = buildLuarocksPackage { luv = buildLuarocksPackage { pname = "luv"; - version = "1.30.0-0"; + version = "1.42.0-0"; knownRockspec = (fetchurl { - url = "https://luarocks.org/luv-1.30.0-0.rockspec"; - sha256 = "05j231z6vpfjbxxmsizbigrsr80bk2dg48fcz12isj668lhia32h"; + url = "https://luarocks.org/luv-1.42.0-0.rockspec"; + sha256 = "0pr2gjjnm60w0csb0dacrjalan7ifsfw4lki4ykxx1f4m5snam09"; }).outPath; src = fetchurl { - url = "https://github.com/luvit/luv/releases/download/1.30.0-0/luv-1.30.0-0.tar.gz"; - sha256 = "1vxmxgdjk2bdnm8d9n3z5lfg6x34cx97j5nh8camm6ps5c0mmisw"; + url = "https://github.com/luvit/luv/releases/download/1.42.0-0/luv-1.42.0-0.tar.gz"; + sha256 = "0dkzjkkm0h516ag6sfz5iji761y9slrcfw325f39zkda1sfql8mm"; }; disabled = (luaOlder "5.1"); @@ -1848,6 +1884,7 @@ markdown = buildLuarocksPackage { "date": "2015-09-27T17:49:28+03:00", "path": "/nix/store/akl80hh077hm20bdqj1lksy0fn2285b5-markdown", "sha256": "019bk2qprszqncnm8zy6ns6709iq1nwkf7i86nr38f035j4lc11y", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1899,6 +1936,7 @@ moonscript = buildLuarocksPackage { "date": "2021-03-18T11:51:52-07:00", "path": "/nix/store/xijbk0bgjpxjgmvscbqnghj4r3zdzgxl-moonscript", "sha256": "14xx6pij0djblfv3g2hi0xlljh7h0yrbb03f4x90q5j66v693gx7", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -1957,18 +1995,16 @@ nvim-client = buildLuarocksPackage { penlight = buildLuarocksPackage { pname = "penlight"; - version = "1.11.0-1"; - knownRockspec = (fetchurl { - url = "https://luarocks.org/penlight-1.11.0-1.rockspec"; - sha256 = "1sjhnywvamyi9fadhra5pw2an1rhy2hk2byfxmr3n5wi0xrqv004"; - }).outPath; + version = "dev-1"; + src = fetchgit ( removeAttrs (builtins.fromJSON ''{ "url": "https://github.com/lunarmodules/penlight.git", - "rev": "e3712f00fae09a166dd62540b677600165d5bcd7", - "date": "2021-08-18T21:37:47+02:00", - "path": "/nix/store/i70ndw8qhvcm828ifb3vyj08y22xp0ka-penlight", - "sha256": "19n9xqkb4hlak0k7hamk4ixwjvyxslsnyh1zjazdzrl8n736xhkl", - "fetchSubmodules": false, + "rev": "0653cdb05591454a9804a7fee8c873b8f06b0b8f", + "date": "2021-08-31T23:42:29+02:00", + "path": "/nix/store/zf3k6z36bxsrbxkkmsa4w6m7vxvlpfgn-penlight", + "sha256": "0l1819dyr9hzmimnjjg99fad6k3ksmlm77hgvdybgz8558lj4g1i", + "fetchLFS": false, + "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false } @@ -1976,7 +2012,7 @@ penlight = buildLuarocksPackage { disabled = (luaOlder "5.1"); propagatedBuildInputs = [ lua luafilesystem ]; - checkInputs = [ busted ]; + checkInputs = [ busted busted ]; doCheck = false; meta = { @@ -1993,10 +2029,11 @@ plenary-nvim = buildLuarocksPackage { src = fetchgit ( removeAttrs (builtins.fromJSON ''{ "url": "https://github.com/nvim-lua/plenary.nvim", - "rev": "15c3cb9e6311dc1a875eacb9fc8df69ca48d7402", - "date": "2021-08-19T19:04:12+02:00", - "path": "/nix/store/fjj6gs1yc9gw3qh3xabf7mra4dlyac5a-plenary.nvim", - "sha256": "0gdysws82vdcyfsfpkpg9wqw223vg6hh74pf821wxh8p6qg3r26m", + "rev": "8c6cc07a68b65eb707be44598f0084647d495978", + "date": "2021-09-26T16:13:25+02:00", + "path": "/nix/store/j8hmr48blm4brq8rqv7b9m08vmalg8sp-plenary.nvim", + "sha256": "05h5n7jj33y9vs6gc8hqlfd628j6i33s3c8fmfl6ahxwfygx2wpd", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -2023,6 +2060,7 @@ rapidjson = buildLuarocksPackage { "date": "2021-04-09T19:59:20+08:00", "path": "/nix/store/65l71ph27pmipgrq8j4whg6n8h2avvs4-lua-rapidjson", "sha256": "1a6srvximxlh6gjkaj5y86d1kf06pc4gby2r6wpdw2pdac8k7xyb", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -2090,6 +2128,7 @@ std-_debug = buildLuarocksPackage { "date": "2020-04-15T16:34:01-07:00", "path": "/nix/store/rgbn0nn7glm7s52d90ds87j10bx20nij-_debug", "sha256": "0p6jz6syh2r8qfk08jf2hp4p902rkamjzpzl8xhkpzf8rdzs937w", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -2116,6 +2155,7 @@ std-normalize = buildLuarocksPackage { "date": "2020-04-15T17:16:16-07:00", "path": "/nix/store/jr4agcn13fk56b8105p6yr9gn767fkds-normalize", "sha256": "0jiykdjxc4b5my12fnzrw3bxracjgxc265xrn8kfx95350kvbzl1", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false @@ -2165,6 +2205,7 @@ vstruct = buildLuarocksPackage { "date": "2020-05-06T23:13:06-04:00", "path": "/nix/store/a4i9k5hx9xiz38bij4hb505dg088jkss-vstruct", "sha256": "0sl9v874mckhh6jbxsan48s5xajzx193k4qlphw69sdbf8kr3p57", + "fetchLFS": false, "fetchSubmodules": true, "deepClone": false, "leaveDotGit": false diff --git a/pkgs/development/lua-modules/lib.nix b/pkgs/development/lua-modules/lib.nix index 9c31f9a5c53..0d429b3ba6d 100644 --- a/pkgs/development/lua-modules/lib.nix +++ b/pkgs/development/lua-modules/lib.nix @@ -60,4 +60,72 @@ rec { requiredLuaModules = requiredLuaModules drv.propagatedBuildInputs; }; }); + + /* generate luarocks config + + generateLuarocksConfig { + externalDeps = [ { name = "CRYPTO"; dep = pkgs.openssl; } ]; + rocksSubdir = "subdir"; + }; + */ + generateLuarocksConfig = { + externalDeps + , requiredLuaRocks + , extraVariables ? {} + , rocksSubdir + }: let + rocksTrees = lib.imap0 + (i: dep: "{ name = [[dep-${toString i}]], root = '${dep}', rocks_dir = '${dep}/${dep.rocksSubdir}' }") + requiredLuaRocks; + + # Explicitly point luarocks to the relevant locations for multiple-output + # derivations that are external dependencies, to work around an issue it has + # (https://github.com/luarocks/luarocks/issues/766) + depVariables = lib.concatMap ({name, dep}: [ + "${name}_INCDIR='${lib.getDev dep}/include';" + "${name}_LIBDIR='${lib.getLib dep}/lib';" + "${name}_BINDIR='${lib.getBin dep}/bin';" + ]) externalDeps'; + + # example externalDeps': [ { name = "CRYPTO"; dep = pkgs.openssl; } ] + externalDeps' = lib.filter (dep: !lib.isDerivation dep) externalDeps; + + externalDepsDirs = map + (x: "'${builtins.toString x}'") + (lib.filter (lib.isDerivation) externalDeps); + + extraVariablesStr = lib.concatStringsSep "\n " + (lib.mapAttrsToList (k: v: "${k}='${v}';") extraVariables); + in '' + local_cache = "" + -- To prevent collisions when creating environments, we install the rock + -- files into per-package subdirectories + rocks_subdir = '${rocksSubdir}' + -- Then we need to tell luarocks where to find the rock files per + -- dependency + rocks_trees = { + ${lib.concatStringsSep "\n, " rocksTrees} + } + '' + lib.optionalString lua.pkgs.isLuaJIT '' + -- Luajit provides some additional functionality built-in; this exposes + -- that to luarock's dependency system + rocks_provided = { + jit='${lua.luaversion}-1'; + ffi='${lua.luaversion}-1'; + luaffi='${lua.luaversion}-1'; + bit='${lua.luaversion}-1'; + } + '' + '' + -- For single-output external dependencies + external_deps_dirs = { + ${lib.concatStringsSep "\n, " externalDepsDirs} + } + variables = { + -- Some needed machinery to handle multiple-output external dependencies, + -- as per https://github.com/luarocks/luarocks/issues/766 + ${lib.optionalString (lib.length depVariables > 0) '' + ${lib.concatStringsSep "\n " depVariables}''} + ${extraVariablesStr} + } + ''; } diff --git a/pkgs/development/lua-modules/overrides.nix b/pkgs/development/lua-modules/overrides.nix index 247cf89f394..399dbd8269b 100644 --- a/pkgs/development/lua-modules/overrides.nix +++ b/pkgs/development/lua-modules/overrides.nix @@ -300,7 +300,7 @@ with super; preBuild = self.luv.preBuild + '' sed -i 's,\(option(BUILD_MODULE.*\)ON,\1OFF,' CMakeLists.txt sed -i 's,\(option(BUILD_SHARED_LIBS.*\)OFF,\1ON,' CMakeLists.txt - sed -i 's,${"\${INSTALL_INC_DIR}"},${placeholder "out"}/include/luv,' CMakeLists.txt + sed -i 's,${"\${.*INSTALL_INC_DIR}"},${placeholder "out"}/include/luv,' CMakeLists.txt ''; nativeBuildInputs = [ pkgs.fixDarwinDylibNames ]; diff --git a/pkgs/development/misc/h3/default.nix b/pkgs/development/misc/h3/default.nix index a5299f865d5..99b7f8fdc32 100644 --- a/pkgs/development/misc/h3/default.nix +++ b/pkgs/development/misc/h3/default.nix @@ -1,4 +1,5 @@ -{ lib, stdenv +{ lib +, stdenv , cmake , fetchFromGitHub }: @@ -22,9 +23,11 @@ stdenv.mkDerivation rec { ]; meta = with lib; { - homepage = "https://github.com/uber/h3"; + homepage = "https://h3geo.org/"; description = "Hexagonal hierarchical geospatial indexing system"; license = licenses.asl20; + changelog = "https://github.com/uber/h3/raw/v${version}/CHANGELOG.md"; + platforms = platforms.all; maintainers = [ maintainers.kalbasit ]; }; } diff --git a/pkgs/development/misc/resholve/README.md b/pkgs/development/misc/resholve/README.md index 024465f306c..0b4bcb371ad 100644 --- a/pkgs/development/misc/resholve/README.md +++ b/pkgs/development/misc/resholve/README.md @@ -2,7 +2,8 @@ resholve converts bare executable references in shell scripts to absolute paths. This will hopefully make its way into the Nixpkgs manual soon, but -until then I'll outline how to use the `resholvePackage` function. +until then I'll outline how to use the `resholvePackage`, `resholveScript`, +and `resholveScriptBin` functions. > Fair warning: resholve does *not* aspire to resolving all valid Shell > scripts. It depends on the OSH/Oil parser, which aims to support most (but @@ -21,7 +22,10 @@ Each "solution" (k=v pair) in this attrset describes one resholve invocation. > - Packages with scripts that require conflicting directives can use multiple > solutions to resolve the scripts separately, but produce a single package. -## Basic Example +The `resholveScript` and `resholveScriptBin` functions support a _single_ +`solution` attrset. This is basically the same as any single solution in `resholvePackage`, except that it doesn't need a `scripts` attr (it is automatically added). + +## Basic `resholvePackage` Example Here's a simple example from one of my own projects, with annotations: <!-- @@ -68,6 +72,28 @@ resholvePackage rec { } ``` +## Basic `resholveScript` and `resholveScriptBin` examples + +Both of these functions have the same basic API. This example is a little +trivial for now. If you have a real usage that you find helpful, please PR it. + +```nix +resholvedScript = resholveScript "name" { + inputs = [ file ]; + interpreter = "${bash}/bin/bash"; + } '' + echo "Hello" + file . + ''; +resholvedScriptBin = resholveScriptBin "name" { + inputs = [ file ]; + interpreter = "${bash}/bin/bash"; + } '' + echo "Hello" + file . + ''; +``` + ## Options `resholvePackage` maps Nix types/idioms into the flags and environment variables @@ -79,7 +105,7 @@ that the `resholve` CLI expects. Here's an overview: | inputs | list | packages to resolve executables from | | interpreter | string | 'none' or abspath for shebang | | prologue | file | text to insert before the first code-line | -| epilogue | file | text to isnert after the last code-line | +| epilogue | file | text to insert after the last code-line | | flags | list | strings to pass as flags | | fake | attrset | [directives](#controlling-resolution-with-directives) | | fix | attrset | [directives](#controlling-resolution-with-directives) | @@ -135,31 +161,31 @@ from the manpage, and the Nix equivalents: ```nix # --fake 'f:setUp;tearDown builtin:setopt source:/etc/bashrc' fake = { - # fake accepts the initial of valid identifier types as a CLI convienience. + # fake accepts the initial of valid identifier types as a CLI convenience. # Use full names in the Nix API. function = [ "setUp" "tearDown" ]; builtin = [ "setopt" ]; source = [ "/etc/bashrc" ]; }; -# --fix 'aliases xargs:ls $GIT:gix' +# --fix 'aliases $GIT:gix /bin/bash' fix = { # all single-word directives use `true` as value aliases = true; - xargs = [ "ls" ]; "$GIT" = [ "gix" ]; + "/bin/bash"; }; -# --keep 'which:git;ls .:$HOME $LS:exa /etc/bashrc ~/.bashrc' +# --keep 'source:$HOME /etc/bashrc ~/.bashrc' keep = { - which = [ "git" "ls" ]; - "." = [ "$HOME" ]; - "$LS" = [ "exa" ]; + source = [ "$HOME" ]; "/etc/bashrc" = true; "~/.bashrc" = true; }; ``` +> **Note:** For now, at least, you'll need to reference the manpage to completely understand these examples. + ## Controlling nested resolution with lore Initially, resolution of commands in the arguments to command-executing @@ -177,6 +203,11 @@ some of the more common commands. - "wrapper" lore maps shell exec wrappers to the programs they exec so that resholve can substitute an executable's verdict for its wrapper's. +> **Caution:** At least when it comes to common utilities, it's best to treat +> overrides as a stopgap until they can be properly handled in resholve and/or +> binlore. Please report things you have to override and, if possible, help +> get them sorted. + There will be more mechanisms for controlling this process in the future (and your reports/experiences will play a role in shaping them...) For now, the main lever is the ability to substitute your own lore. This is how you'd diff --git a/pkgs/development/misc/resholve/default.nix b/pkgs/development/misc/resholve/default.nix index dae7fdc384c..714c4ecabe0 100644 --- a/pkgs/development/misc/resholve/default.nix +++ b/pkgs/development/misc/resholve/default.nix @@ -1,5 +1,5 @@ { callPackage -, ... +, writeTextFile }: let @@ -8,11 +8,46 @@ let in rec { resholve = callPackage ./resholve.nix { - inherit (source) rSrc; - inherit (source) version; + inherit (source) rSrc version; inherit (deps.oil) oildev; }; - resholvePackage = callPackage ./resholve-package.nix { + resholve-utils = callPackage ./resholve-utils.nix { inherit resholve; }; + resholvePackage = callPackage ./resholve-package.nix { + inherit resholve resholve-utils; + }; + resholveScript = name: partialSolution: text: + writeTextFile { + inherit name text; + executable = true; + checkPhase = '' + ( + PS4=$'\x1f'"\033[33m[resholve context]\033[0m " + set -x + ${resholve-utils.makeInvocation name (partialSolution // { + scripts = [ "${placeholder "out"}" ]; + })} + ) + ${partialSolution.interpreter} -n $out + ''; + }; + resholveScriptBin = name: partialSolution: text: + writeTextFile rec { + inherit name text; + executable = true; + destination = "/bin/${name}"; + checkPhase = '' + ( + cd "$out" + PS4=$'\x1f'"\033[33m[resholve context]\033[0m " + set -x + : changing directory to $PWD + ${resholve-utils.makeInvocation name (partialSolution // { + scripts = [ "bin/${name}" ]; + })} + ) + ${partialSolution.interpreter} -n $out/bin/${name} + ''; + }; } diff --git a/pkgs/development/misc/resholve/oildev.nix b/pkgs/development/misc/resholve/oildev.nix index b15047b53ff..635aca9aa57 100644 --- a/pkgs/development/misc/resholve/oildev.nix +++ b/pkgs/development/misc/resholve/oildev.nix @@ -46,6 +46,11 @@ rec { nativeBuildInputs = [ git ]; }; + /* + Upstream isn't interested in packaging this as a library + (or accepting all of the patches we need to do so). + This creates one without disturbing upstream too much. + */ oildev = python27Packages.buildPythonPackage rec { pname = "oildev-unstable"; version = "2021-07-14"; @@ -61,22 +66,21 @@ rec { It's not critical to drop most of these; the primary target is the vendored fork of Python-2.7.13, which is ~ 55M and over 3200 files, dozens of which get interpreter script patches in fixup. + + Note: -f is necessary to keep it from being a pain to update + hash on rev updates. Command will fail w/o and not print hash. */ extraPostFetch = '' rm -rf Python-2.7.13 benchmarks metrics py-yajl rfc gold web testdata services demo devtools cpp ''; }; - # TODO: not sure why I'm having to set this for nix-build... - # can anyone tell if I'm doing something wrong? - SOURCE_DATE_EPOCH = 315532800; - # patch to support a python package, pass tests on macOS, etc. patchSrc = fetchFromGitHub { owner = "abathur"; repo = "nix-py-dev-oil"; - rev = "v0.8.12"; - hash = "sha256-/EvwxL201lGsioL0lIhzM8VTghe6FuVbc3PBJgY8c8E="; + rev = "v0.8.12.1"; + hash = "sha256-7JVnosdcvmVFN3h6SIeeqcJFcyFkai//fFuzi7ThNMY="; }; patches = [ "${patchSrc}/0001-add_setup_py.patch" @@ -102,7 +106,12 @@ rec { patchShebangs asdl build core doctools frontend native oil_lang ''; - # TODO: this may be obsolete? + /* + We did convince oil to upstream an env for specifying + this to support a shell.nix. Would need a patch if they + later drop this support. See: + https://github.com/oilshell/oil/blob/46900310c7e4a07a6223eb6c08e4f26460aad285/doctools/cmark.py#L30-L34 + */ _NIX_SHELL_LIBCMARK = "${cmark}/lib/libcmark${stdenv.hostPlatform.extensions.sharedLibrary}"; # See earlier note on glibcLocales TODO: verify needed? diff --git a/pkgs/development/misc/resholve/resholve-package.nix b/pkgs/development/misc/resholve/resholve-package.nix index 78ee6603b9d..89852efb8ba 100644 --- a/pkgs/development/misc/resholve/resholve-package.nix +++ b/pkgs/development/misc/resholve/resholve-package.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, resholve, binlore }: +{ stdenv, lib, resholve, resholve-utils }: { pname , src @@ -9,81 +9,11 @@ }@attrs: let inherit stdenv; - /* These functions break up the work of partially validating the - 'solutions' attrset and massaging it into env/cli args. - - Note: some of the left-most args do not *have* to be passed as - deep as they are, but I've done so to provide more error context - */ - - # for brevity / line length - spaces = l: builtins.concatStringsSep " " l; - semicolons = l: builtins.concatStringsSep ";" l; - - /* Throw a fit with dotted attr path context */ - nope = path: msg: - throw "${builtins.concatStringsSep "." path}: ${msg}"; - - /* Special-case directive value representations by type */ - makeDirective = solution: env: name: val: - if builtins.isInt val then builtins.toString val - else if builtins.isString val then name - else if true == val then name - else if false == val then "" # omit! - else if null == val then "" # omit! - else if builtins.isList val then "${name}:${semicolons val}" - else nope [ solution env name ] "unexpected type: ${builtins.typeOf val}"; - - /* Build fake/fix/keep directives from Nix types */ - makeDirectives = solution: env: val: - lib.mapAttrsToList (makeDirective solution env) val; - - /* Special-case value representation by type/name */ - makeEnvVal = solution: env: val: - if env == "inputs" then lib.makeBinPath val - else if builtins.isString val then val - else if builtins.isList val then spaces val - else if builtins.isAttrs val then spaces (makeDirectives solution env val) - else nope [ solution env ] "unexpected type: ${builtins.typeOf val}"; - - /* Shell-format each env value */ - shellEnv = solution: env: value: - lib.escapeShellArg (makeEnvVal solution env value); - - /* Build a single ENV=val pair */ - makeEnv = solution: env: value: - "RESHOLVE_${lib.toUpper env}=${shellEnv solution env value}"; - - /* Discard attrs claimed by makeArgs */ - removeCliArgs = value: - removeAttrs value [ "scripts" "flags" ]; - - /* Verify required arguments are present */ - validateSolution = { scripts, inputs, interpreter, ... }: true; - - /* Pull out specific solution keys to build ENV=val pairs */ - makeEnvs = solution: value: - spaces (lib.mapAttrsToList (makeEnv solution) (removeCliArgs value)); - - /* Pull out specific solution keys to build CLI argstring */ - makeArgs = { flags ? [ ], scripts, ... }: - spaces (flags ++ scripts); - - /* Build a single resholve invocation */ - makeInvocation = solution: value: - if validateSolution value then - # we pass resholve a directory - "RESHOLVE_LORE=${binlore.collect { drvs = value.inputs; } } ${makeEnvs solution value} resholve --overwrite ${makeArgs value}" - else throw "invalid solution"; # shouldn't trigger for now - - /* Build resholve invocation for each solution. */ - makeCommands = solutions: - lib.mapAttrsToList makeInvocation solutions; self = (stdenv.mkDerivation ((removeAttrs attrs [ "solutions" ]) // { inherit pname version src; - buildInputs = [ resholve ]; + buildInputs = (lib.optionals (builtins.hasAttr "buildInputs" attrs) attrs.buildInputs) ++ [ resholve ]; # enable below for verbose debug info if needed # supports default python.logging levels @@ -99,7 +29,7 @@ let PS4=$'\x1f'"\033[33m[resholve context]\033[0m " set -x : changing directory to $PWD - ${builtins.concatStringsSep "\n" (makeCommands solutions)} + ${builtins.concatStringsSep "\n" (resholve-utils.makeCommands solutions)} ) ''; })); diff --git a/pkgs/development/misc/resholve/resholve-utils.nix b/pkgs/development/misc/resholve/resholve-utils.nix new file mode 100644 index 00000000000..2d3c55b8756 --- /dev/null +++ b/pkgs/development/misc/resholve/resholve-utils.nix @@ -0,0 +1,74 @@ +{ lib, resholve, binlore }: + +rec { + /* These functions break up the work of partially validating the + 'solutions' attrset and massaging it into env/cli args. + + Note: some of the left-most args do not *have* to be passed as + deep as they are, but I've done so to provide more error context + */ + + # for brevity / line length + spaces = l: builtins.concatStringsSep " " l; + semicolons = l: builtins.concatStringsSep ";" l; + + /* Throw a fit with dotted attr path context */ + nope = path: msg: + throw "${builtins.concatStringsSep "." path}: ${msg}"; + + /* Special-case directive value representations by type */ + makeDirective = solution: env: name: val: + if builtins.isInt val then builtins.toString val + else if builtins.isString val then name + else if true == val then name + else if false == val then "" # omit! + else if null == val then "" # omit! + else if builtins.isList val then "${name}:${semicolons val}" + else nope [ solution env name ] "unexpected type: ${builtins.typeOf val}"; + + /* Build fake/fix/keep directives from Nix types */ + makeDirectives = solution: env: val: + lib.mapAttrsToList (makeDirective solution env) val; + + /* Special-case value representation by type/name */ + makeEnvVal = solution: env: val: + if env == "inputs" then lib.makeBinPath val + else if builtins.isString val then val + else if builtins.isList val then spaces val + else if builtins.isAttrs val then spaces (makeDirectives solution env val) + else nope [ solution env ] "unexpected type: ${builtins.typeOf val}"; + + /* Shell-format each env value */ + shellEnv = solution: env: value: + lib.escapeShellArg (makeEnvVal solution env value); + + /* Build a single ENV=val pair */ + makeEnv = solution: env: value: + "RESHOLVE_${lib.toUpper env}=${shellEnv solution env value}"; + + /* Discard attrs claimed by makeArgs */ + removeCliArgs = value: + removeAttrs value [ "scripts" "flags" ]; + + /* Verify required arguments are present */ + validateSolution = { scripts, inputs, interpreter, ... }: true; + + /* Pull out specific solution keys to build ENV=val pairs */ + makeEnvs = solution: value: + spaces (lib.mapAttrsToList (makeEnv solution) (removeCliArgs value)); + + /* Pull out specific solution keys to build CLI argstring */ + makeArgs = { flags ? [ ], scripts, ... }: + spaces (flags ++ scripts); + + /* Build a single resholve invocation */ + makeInvocation = solution: value: + if validateSolution value then + # we pass resholve a directory + "RESHOLVE_LORE=${binlore.collect { drvs = value.inputs; } } ${makeEnvs solution value} ${resholve}/bin/resholve --overwrite ${makeArgs value}" + else throw "invalid solution"; # shouldn't trigger for now + + /* Build resholve invocation for each solution. */ + makeCommands = solutions: + lib.mapAttrsToList makeInvocation solutions; +} diff --git a/pkgs/development/misc/resholve/source.nix b/pkgs/development/misc/resholve/source.nix index 32ffeb98fd7..5633e90f4bb 100644 --- a/pkgs/development/misc/resholve/source.nix +++ b/pkgs/development/misc/resholve/source.nix @@ -3,7 +3,7 @@ }: rec { - version = "0.6.0"; + version = "0.6.6"; rSrc = # local build -> `make ci`; `make clean` to restore # return to remote source @@ -14,6 +14,6 @@ rec { owner = "abathur"; repo = "resholve"; rev = "v${version}"; - hash = "sha256-GfhhU9f5kiYcuYTPKWXCIkAGsz7GhAUGjAmIZ8Ww5X4="; + hash = "sha256-bupf3c9tNPAEMzFEDcvg483bSiwZFuB3ZqveG89dgkE="; }; } diff --git a/pkgs/development/misc/resholve/test.nix b/pkgs/development/misc/resholve/test.nix index f263c019d81..ca8a51c705d 100644 --- a/pkgs/development/misc/resholve/test.nix +++ b/pkgs/development/misc/resholve/test.nix @@ -23,7 +23,7 @@ let inherit (callPackage ./default.nix { }) - resholve resholvePackage; + resholve resholvePackage resholveScript resholveScriptBin; # ourCoreutils = coreutils.override { singleBinary = false; }; @@ -224,4 +224,20 @@ rec { fi ''; }; + + # Caution: ci.nix asserts the equality of both of these w/ diff + resholvedScript = resholveScript "resholved-script" { + inputs = [ file ]; + interpreter = "${bash}/bin/bash"; + } '' + echo "Hello" + file . + ''; + resholvedScriptBin = resholveScriptBin "resholved-script-bin" { + inputs = [ file ]; + interpreter = "${bash}/bin/bash"; + } '' + echo "Hello" + file . + ''; } diff --git a/pkgs/development/ocaml-modules/batteries/default.nix b/pkgs/development/ocaml-modules/batteries/default.nix index 7785a70e050..b88b7c59956 100644 --- a/pkgs/development/ocaml-modules/batteries/default.nix +++ b/pkgs/development/ocaml-modules/batteries/default.nix @@ -1,4 +1,6 @@ -{ stdenv, lib, fetchurl, ocaml, findlib, ocamlbuild, qtest, num }: +{ stdenv, lib, fetchurl, ocaml, findlib, ocamlbuild, qtest, num +, doCheck ? lib.versionAtLeast ocaml.version "4.08" && !stdenv.isAarch64 +}: let version = "3.3.0"; in @@ -14,7 +16,7 @@ stdenv.mkDerivation { checkInputs = [ qtest ]; propagatedBuildInputs = [ num ]; - doCheck = lib.versionAtLeast ocaml.version "4.04" && !stdenv.isAarch64; + inherit doCheck; checkTarget = "test"; createFindlibDestdir = true; diff --git a/pkgs/development/ocaml-modules/conduit/async.nix b/pkgs/development/ocaml-modules/conduit/async.nix index e78cb2bc516..1be437b4ee7 100644 --- a/pkgs/development/ocaml-modules/conduit/async.nix +++ b/pkgs/development/ocaml-modules/conduit/async.nix @@ -1,4 +1,6 @@ -{ lib, buildDunePackage, async, async_ssl, ppx_sexp_conv, ppx_here, uri, conduit }: +{ lib, buildDunePackage, async, async_ssl, ppx_sexp_conv, ppx_here, uri, conduit +, core, ipaddr, ipaddr-sexp, sexplib +}: buildDunePackage { pname = "conduit-async"; @@ -11,7 +13,16 @@ buildDunePackage { buildInputs = [ ppx_sexp_conv ppx_here ]; - propagatedBuildInputs = [ async async_ssl conduit uri ]; + propagatedBuildInputs = [ + async + async_ssl + conduit + uri + ipaddr + ipaddr-sexp + core + sexplib + ]; meta = conduit.meta // { description = "A network connection establishment library for Async"; diff --git a/pkgs/development/ocaml-modules/conduit/default.nix b/pkgs/development/ocaml-modules/conduit/default.nix index 96f5bf43d21..077180124e4 100644 --- a/pkgs/development/ocaml-modules/conduit/default.nix +++ b/pkgs/development/ocaml-modules/conduit/default.nix @@ -5,14 +5,14 @@ buildDunePackage rec { pname = "conduit"; - version = "4.0.0"; + version = "4.0.1"; useDune2 = true; minimumOCamlVersion = "4.03"; src = fetchurl { url = "https://github.com/mirage/ocaml-conduit/releases/download/v${version}/conduit-v${version}.tbz"; - sha256 = "74b29d72bf47adc5d5c4cae6130ad5a2a4923118b9c571331bd1cb3c56decd2a"; + sha256 = "500d95bf2a524f4851e94373e32d26b6e99ee04e5134db69fe6e151c3aad9b1f"; }; buildInputs = [ ppx_sexp_conv ]; diff --git a/pkgs/development/ocaml-modules/containers/data.nix b/pkgs/development/ocaml-modules/containers/data.nix index 3694a7b2941..29d7bbb26b0 100644 --- a/pkgs/development/ocaml-modules/containers/data.nix +++ b/pkgs/development/ocaml-modules/containers/data.nix @@ -6,10 +6,9 @@ buildDunePackage { pname = "containers-data"; - inherit (containers) src version useDune2; + inherit (containers) src version doCheck useDune2; buildInputs = [ dune-configurator ]; - doCheck = true; checkInputs = [ gen iter qcheck ]; propagatedBuildInputs = [ containers ]; diff --git a/pkgs/development/ocaml-modules/containers/default.nix b/pkgs/development/ocaml-modules/containers/default.nix index b0df5206152..de6c8076ced 100644 --- a/pkgs/development/ocaml-modules/containers/default.nix +++ b/pkgs/development/ocaml-modules/containers/default.nix @@ -22,7 +22,7 @@ buildDunePackage rec { checkInputs = [ gen iter ounit qcheck uutf ]; - doCheck = true; + doCheck = lib.versionAtLeast ocaml.version "4.08"; meta = { homepage = "https://github.com/c-cube/ocaml-containers"; diff --git a/pkgs/development/ocaml-modules/cstruct/default.nix b/pkgs/development/ocaml-modules/cstruct/default.nix index 8b0c4ee9ebb..70f49ab1470 100644 --- a/pkgs/development/ocaml-modules/cstruct/default.nix +++ b/pkgs/development/ocaml-modules/cstruct/default.nix @@ -2,7 +2,7 @@ buildDunePackage rec { pname = "cstruct"; - version = "6.0.0"; + version = "6.0.1"; useDune2 = true; @@ -10,7 +10,7 @@ buildDunePackage rec { src = fetchurl { url = "https://github.com/mirage/ocaml-cstruct/releases/download/v${version}/cstruct-v${version}.tbz"; - sha256 = "0xi6cj85z033fqrqdkwac6gg07629vzdhx03c3lhiwwc4lpnv8bq"; + sha256 = "4a67bb8f042753453c59eabf0e47865631253ba694091ce6062aac05d47a9bed"; }; propagatedBuildInputs = [ bigarray-compat ]; diff --git a/pkgs/development/ocaml-modules/cstruct/ppx.nix b/pkgs/development/ocaml-modules/cstruct/ppx.nix index aa003295e90..523a2c04f61 100644 --- a/pkgs/development/ocaml-modules/cstruct/ppx.nix +++ b/pkgs/development/ocaml-modules/cstruct/ppx.nix @@ -1,6 +1,5 @@ { lib, buildDunePackage, cstruct, sexplib, ppxlib, stdlib-shims , ounit, cppo, ppx_sexp_conv, cstruct-unix, cstruct-sexp -, fetchpatch }: if !lib.versionAtLeast (cstruct.version or "1") "3" @@ -11,22 +10,10 @@ buildDunePackage { pname = "ppx_cstruct"; inherit (cstruct) version src useDune2 meta; - minimumOCamlVersion = "4.07"; - - # prevent ANSI escape sequences from messing up the test cases - # https://github.com/mirage/ocaml-cstruct/issues/283 - patches = [ - (fetchpatch { - url = "https://github.com/mirage/ocaml-cstruct/pull/285/commits/60dfed98b4c34455bf339ac60e2ed5ef05feb48f.patch"; - sha256 = "1x9i62nrlfy9l44vb0a7qjfrg2wyki4c8nmmqnzwpcbkgxi3q6n5"; - }) - ]; + minimalOCamlVersion = "4.08"; propagatedBuildInputs = [ cstruct ppxlib sexplib stdlib-shims ]; - # disable until ppx_sexp_conv uses ppxlib 0.20.0 (or >= 0.16.0) - # since the propagation of the older ppxlib breaks the ppx_cstruct - # build. - doCheck = false; + doCheck = true; checkInputs = [ ounit cppo ppx_sexp_conv cstruct-sexp cstruct-unix ]; } diff --git a/pkgs/development/ocaml-modules/gen/default.nix b/pkgs/development/ocaml-modules/gen/default.nix index 77fc0b63c55..1c12f3ac5f8 100644 --- a/pkgs/development/ocaml-modules/gen/default.nix +++ b/pkgs/development/ocaml-modules/gen/default.nix @@ -1,9 +1,8 @@ { stdenv, lib, fetchFromGitHub, ocaml, findlib, ocamlbuild, qtest, ounit }: -let version = "0.5"; in - -stdenv.mkDerivation { - name = "ocaml${ocaml.version}-gen-${version}"; +stdenv.mkDerivation rec { + version = "0.5"; + pname = "ocaml${ocaml.version}-gen"; src = fetchFromGitHub { owner = "c-cube"; @@ -13,14 +12,12 @@ stdenv.mkDerivation { }; nativeBuildInputs = [ ocaml findlib ocamlbuild ]; - buildInputs = [ qtest ounit ]; + buildInputs = lib.optionals doCheck [ qtest ounit ]; strictDeps = true; - configureFlags = [ - "--enable-tests" - ]; + configureFlags = lib.optional doCheck "--enable-tests"; - doCheck = true; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkTarget = "test"; createFindlibDestdir = true; @@ -29,6 +26,6 @@ stdenv.mkDerivation { homepage = "https://github.com/c-cube/gen"; description = "Simple, efficient iterators for OCaml"; license = lib.licenses.bsd3; - platforms = ocaml.meta.platforms or []; + inherit (ocaml.meta) platforms; }; } diff --git a/pkgs/development/ocaml-modules/git/default.nix b/pkgs/development/ocaml-modules/git/default.nix index 954e4956c81..b359a397f31 100644 --- a/pkgs/development/ocaml-modules/git/default.nix +++ b/pkgs/development/ocaml-modules/git/default.nix @@ -8,14 +8,14 @@ buildDunePackage rec { pname = "git"; - version = "3.4.0"; + version = "3.5.0"; minimumOCamlVersion = "4.08"; useDune2 = true; src = fetchurl { url = "https://github.com/mirage/ocaml-git/releases/download/${version}/git-${version}.tbz"; - sha256 = "6eef1240c7c85a8e495b82ef863c509ad41d75e0c45cf73c34ed1bdafd03413f"; + sha256 = "bcd5a0aef9957193cbaeeb17c22201e5ca4e815e67bbc696e88efdb38c25ec03"; }; # remove changelog for the carton package diff --git a/pkgs/development/ocaml-modules/git/paf.nix b/pkgs/development/ocaml-modules/git/paf.nix index cf0272ddf3b..9db8c872798 100644 --- a/pkgs/development/ocaml-modules/git/paf.nix +++ b/pkgs/development/ocaml-modules/git/paf.nix @@ -3,8 +3,6 @@ , mimic , paf , ca-certs-nss -, cohttp -, cohttp-lwt , fmt , ipaddr , logs @@ -16,6 +14,12 @@ , rresult , tls , uri +, bigarray-compat +, bigstringaf +, domain-name +, httpaf +, mirage-flow +, tls-mirage }: buildDunePackage { @@ -28,8 +32,6 @@ buildDunePackage { mimic paf ca-certs-nss - cohttp - cohttp-lwt fmt lwt result @@ -41,6 +43,12 @@ buildDunePackage { mirage-time tls uri + bigarray-compat + bigstringaf + domain-name + httpaf + mirage-flow + tls-mirage ]; meta = git.meta // { diff --git a/pkgs/development/ocaml-modules/iter/default.nix b/pkgs/development/ocaml-modules/iter/default.nix index d7b3ff64d30..34e14baea7c 100644 --- a/pkgs/development/ocaml-modules/iter/default.nix +++ b/pkgs/development/ocaml-modules/iter/default.nix @@ -18,7 +18,7 @@ buildDunePackage rec { buildInputs = [ dune-configurator ]; propagatedBuildInputs = [ result ]; - doCheck = lib.versionAtLeast ocaml.version "4.07"; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkInputs = [ mdx.bin qtest ]; meta = { diff --git a/pkgs/development/ocaml-modules/letsencrypt/app.nix b/pkgs/development/ocaml-modules/letsencrypt/app.nix new file mode 100644 index 00000000000..dc9006d6d16 --- /dev/null +++ b/pkgs/development/ocaml-modules/letsencrypt/app.nix @@ -0,0 +1,45 @@ +{ lib +, buildDunePackage +, letsencrypt +, letsencrypt-dns +, cmdliner +, cohttp-lwt-unix +, logs +, fmt +, lwt +, mirage-crypto-rng +, ptime +, bos +, fpath +, randomconv +}: + +buildDunePackage { + pname = "letsencrypt-app"; + + inherit (letsencrypt) + src + version + useDune2 + minimumOCamlVersion + ; + + buildInputs = [ + letsencrypt + letsencrypt-dns + cmdliner + cohttp-lwt-unix + logs + fmt + lwt + mirage-crypto-rng + ptime + bos + fpath + randomconv + ]; + + meta = letsencrypt.meta // { + description = "An ACME client implementation of the ACME protocol (RFC 8555) for OCaml"; + }; +} diff --git a/pkgs/development/ocaml-modules/letsencrypt/default.nix b/pkgs/development/ocaml-modules/letsencrypt/default.nix index 0a70bf30242..623fba942f2 100644 --- a/pkgs/development/ocaml-modules/letsencrypt/default.nix +++ b/pkgs/development/ocaml-modules/letsencrypt/default.nix @@ -6,11 +6,6 @@ , uri , rresult , base64 -, cmdliner -, cohttp -, cohttp-lwt -, cohttp-lwt-unix -, zarith , logs , fmt , lwt @@ -20,38 +15,25 @@ , x509 , yojson , ounit -, dns -, dns-tsig , ptime -, bos -, fpath -, randomconv , domain-name }: buildDunePackage rec { pname = "letsencrypt"; - version = "0.2.5"; + version = "0.3.0"; src = fetchurl { url = "https://github.com/mmaker/ocaml-letsencrypt/releases/download/v${version}/letsencrypt-v${version}.tbz"; - sha256 = "6e3bbb5f593823d49e83e698c06cf9ed48818695ec8318507b311ae74731e607"; + sha256 = "8772b7e6dbda0559a03a7b23b75c1431d42ae09a154eefd64b4c7e23b8d92deb"; }; minimumOCamlVersion = "4.08"; useDune2 = true; buildInputs = [ - cmdliner - cohttp - cohttp-lwt-unix - zarith fmt - mirage-crypto-rng ptime - bos - fpath - randomconv domain-name ]; @@ -65,11 +47,8 @@ buildDunePackage rec { asn1-combinators x509 uri - dns - dns-tsig rresult astring - cohttp-lwt ]; doCheck = true; diff --git a/pkgs/development/ocaml-modules/letsencrypt/dns.nix b/pkgs/development/ocaml-modules/letsencrypt/dns.nix new file mode 100644 index 00000000000..99058f48d06 --- /dev/null +++ b/pkgs/development/ocaml-modules/letsencrypt/dns.nix @@ -0,0 +1,35 @@ +{ lib +, buildDunePackage +, letsencrypt +, logs +, fmt +, lwt +, dns +, dns-tsig +, domain-name +}: + +buildDunePackage { + pname = "letsencrypt-dns"; + + inherit (letsencrypt) + version + src + useDune2 + minimumOCamlVersion + ; + + propagatedBuildInputs = [ + letsencrypt + dns + dns-tsig + domain-name + logs + lwt + fmt + ]; + + meta = letsencrypt.meta // { + description = "A DNS solver for the ACME implementation in OCaml"; + }; +} diff --git a/pkgs/development/ocaml-modules/logs/default.nix b/pkgs/development/ocaml-modules/logs/default.nix index fedfb1c7637..e786b02d93e 100644 --- a/pkgs/development/ocaml-modules/logs/default.nix +++ b/pkgs/development/ocaml-modules/logs/default.nix @@ -1,5 +1,7 @@ { lib, stdenv, fetchurl, ocaml, findlib, ocamlbuild -, topkg, result, lwt, cmdliner, fmt }: +, topkg, result, lwt, cmdliner, fmt +, js_of_ocaml +}: let pname = "logs"; webpage = "https://erratique.ch/software/${pname}"; @@ -19,10 +21,10 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ ocaml findlib ocamlbuild ]; - buildInputs = [ findlib topkg fmt cmdliner lwt ]; + buildInputs = [ findlib topkg fmt cmdliner js_of_ocaml lwt ]; propagatedBuildInputs = [ result ]; - buildPhase = "${topkg.run} build --with-js_of_ocaml false"; + buildPhase = "${topkg.run} build --with-js_of_ocaml true"; inherit (topkg) installPhase; diff --git a/pkgs/development/ocaml-modules/lru/default.nix b/pkgs/development/ocaml-modules/lru/default.nix index 035d612cfe2..ec78ec91012 100644 --- a/pkgs/development/ocaml-modules/lru/default.nix +++ b/pkgs/development/ocaml-modules/lru/default.nix @@ -13,7 +13,7 @@ buildDunePackage rec { propagatedBuildInputs = [ psq ]; - doCheck = lib.versionAtLeast ocaml.version "4.05"; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkInputs = [ qcheck-alcotest ]; meta = { diff --git a/pkgs/development/ocaml-modules/macaddr/default.nix b/pkgs/development/ocaml-modules/macaddr/default.nix index 4f6f2e4287f..f81529ed3a2 100644 --- a/pkgs/development/ocaml-modules/macaddr/default.nix +++ b/pkgs/development/ocaml-modules/macaddr/default.nix @@ -4,7 +4,7 @@ buildDunePackage rec { pname = "macaddr"; - version = "5.1.0"; + version = "5.2.0"; useDune2 = true; @@ -12,7 +12,7 @@ buildDunePackage rec { src = fetchurl { url = "https://github.com/mirage/ocaml-ipaddr/releases/download/v${version}/ipaddr-v${version}.tbz"; - sha256 = "7e9328222c1a5f39b0751baecd7e27a842bdb0082fd48126eacbbad8816fbf5a"; + sha256 = "f98d237cc1f783a0ba7dff0c6c69b5f519fec056950e3e3e7c15e5511ee5b7ec"; }; checkInputs = [ ppx_sexp_conv ounit ]; diff --git a/pkgs/development/ocaml-modules/mirage-block/combinators.nix b/pkgs/development/ocaml-modules/mirage-block/combinators.nix index 9d0cdd435cb..4787373c1e3 100644 --- a/pkgs/development/ocaml-modules/mirage-block/combinators.nix +++ b/pkgs/development/ocaml-modules/mirage-block/combinators.nix @@ -1,9 +1,17 @@ -{ buildDunePackage, mirage-block, io-page, logs }: +{ buildDunePackage, fetchpatch, mirage-block, io-page, logs }: buildDunePackage rec { pname = "mirage-block-combinators"; inherit (mirage-block) version src useDune2; + patches = [ + (fetchpatch { + name = "cstruct-6.0.0-compat.patch"; + url = "https://github.com/mirage/mirage-block/pull/49/commits/ff54105b21fb32d0d6977b419db0776e6c2ea166.patch"; + sha256 = "0bwgypnsyn4d9b46q6r7kh5qfcy58db7krs6z5zw83hc7y20y2sd"; + }) + ]; + propagatedBuildInputs = [ mirage-block io-page logs ]; meta = mirage-block.meta // { diff --git a/pkgs/development/ocaml-modules/ocsigen-toolkit/default.nix b/pkgs/development/ocaml-modules/ocsigen-toolkit/default.nix index 0e430e2ba29..78420d09779 100644 --- a/pkgs/development/ocaml-modules/ocsigen-toolkit/default.nix +++ b/pkgs/development/ocaml-modules/ocsigen-toolkit/default.nix @@ -5,7 +5,7 @@ stdenv.mkDerivation rec { pname = "ocsigen-toolkit"; name = "ocaml${ocaml.version}-${pname}-${version}"; - version = "2.12.2"; + version = "3.0.1"; propagatedBuildInputs = [ calendar js_of_ocaml-ppx_deriving_json eliom ]; buildInputs = [ ocaml findlib opaline ]; @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { owner = "ocsigen"; repo = pname; rev = version; - sha256 = "1fqrh7wrzs76qj3nvmxqy76pzqvsja2dwzqxyl8rkh5jg676vmqy"; + sha256 = "1yx50ja2wcs5vfy4rk9szgwccpnihkjn14i4ywchx4yr4ppr00fm"; }; meta = { diff --git a/pkgs/development/ocaml-modules/paf/cohttp.nix b/pkgs/development/ocaml-modules/paf/cohttp.nix new file mode 100644 index 00000000000..3ea55b8e71b --- /dev/null +++ b/pkgs/development/ocaml-modules/paf/cohttp.nix @@ -0,0 +1,51 @@ +{ lib +, buildDunePackage +, paf +, cohttp-lwt +, domain-name +, httpaf +, ipaddr +, alcotest-lwt +, fmt +, logs +, mirage-crypto-rng +, mirage-time-unix +, tcpip +, uri +, lwt +}: + +buildDunePackage { + pname = "paf-cohttp"; + + inherit (paf) + version + src + useDune2 + minimumOCamlVersion + ; + + propagatedBuildInputs = [ + paf + cohttp-lwt + domain-name + httpaf + ipaddr + ]; + + doCheck = true; + checkInputs = [ + alcotest-lwt + fmt + logs + mirage-crypto-rng + mirage-time-unix + tcpip + uri + lwt + ]; + + meta = paf.meta // { + description = "A CoHTTP client with its HTTP/AF implementation"; + }; +} diff --git a/pkgs/development/ocaml-modules/paf/default.nix b/pkgs/development/ocaml-modules/paf/default.nix index 375ba1c125e..a4f3a99ce48 100644 --- a/pkgs/development/ocaml-modules/paf/default.nix +++ b/pkgs/development/ocaml-modules/paf/default.nix @@ -4,7 +4,6 @@ , fetchpatch , mirage-stack , mirage-time -, httpaf , h2 , tls-mirage , mimic @@ -28,15 +27,16 @@ , ptime , uri , alcotest-lwt +, cstruct }: buildDunePackage rec { pname = "paf"; - version = "0.0.3"; + version = "0.0.5"; src = fetchurl { url = "https://github.com/dinosaure/paf-le-chien/releases/download/${version}/paf-${version}.tbz"; - sha256 = "a0bbb84b19e1f0255337fc4d7017f3ea3611b241746e391b11c1d8b1f5f30a2b"; + sha256 = "e85a018046eb062d2399fdbe8d9d3400a4d5cd51bb62840446503f557c3eeff1"; }; useDune2 = true; @@ -45,7 +45,6 @@ buildDunePackage rec { propagatedBuildInputs = [ mirage-stack mirage-time - httpaf h2 tls-mirage mimic @@ -60,6 +59,7 @@ buildDunePackage rec { faraday tls x509 + cstruct ]; doCheck = true; diff --git a/pkgs/development/ocaml-modules/paf/le.nix b/pkgs/development/ocaml-modules/paf/le.nix new file mode 100644 index 00000000000..9281e48b6c2 --- /dev/null +++ b/pkgs/development/ocaml-modules/paf/le.nix @@ -0,0 +1,39 @@ +{ lib +, buildDunePackage +, paf +, duration +, emile +, httpaf +, letsencrypt +, mirage-stack +, mirage-time +, tls-mirage +}: + +buildDunePackage { + pname = "paf-le"; + + inherit (paf) + version + src + useDune2 + minimumOCamlVersion + ; + + propagatedBuildInputs = [ + paf + duration + emile + httpaf + letsencrypt + mirage-stack + mirage-time + tls-mirage + ]; + + doCheck = true; + + meta = paf.meta // { + description = "A CoHTTP client with its HTTP/AF implementation"; + }; +} diff --git a/pkgs/development/ocaml-modules/psq/default.nix b/pkgs/development/ocaml-modules/psq/default.nix index f7c2f3497a1..ea9a0615b41 100644 --- a/pkgs/development/ocaml-modules/psq/default.nix +++ b/pkgs/development/ocaml-modules/psq/default.nix @@ -14,7 +14,7 @@ buildDunePackage rec { propagatedBuildInputs = [ seq ]; - doCheck = lib.versionAtLeast ocaml.version "4.07"; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkInputs = [ qcheck-alcotest ]; meta = { diff --git a/pkgs/development/ocaml-modules/qcheck/core.nix b/pkgs/development/ocaml-modules/qcheck/core.nix index e1b3503b541..efa3f11967e 100644 --- a/pkgs/development/ocaml-modules/qcheck/core.nix +++ b/pkgs/development/ocaml-modules/qcheck/core.nix @@ -2,17 +2,17 @@ buildDunePackage rec { pname = "qcheck-core"; - version = "0.17"; + version = "0.18"; useDune2 = true; - minimumOCamlVersion = "4.03"; + minimalOCamlVersion = "4.08"; src = fetchFromGitHub { owner = "c-cube"; repo = "qcheck"; - rev = version; - sha256 = "0qfyqhfg98spmfci9z6f527a16gwjnx2lrbbgw67p37ys5acrfar"; + rev = "v${version}"; + sha256 = "1s652hrj2sxqj30dfl300zjvvqk3r62a1bnzqw1hqyf6pi88qn8x"; }; meta = { diff --git a/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix b/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix index a3d297b4f5a..993bcbefafd 100644 --- a/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix +++ b/pkgs/development/ocaml-modules/reason-native/qcheck-rely.nix @@ -16,5 +16,6 @@ meta = { description = "A library containing custom Rely matchers allowing for easily using QCheck with Rely. QCheck is a 'QuickCheck inspired property-based testing for OCaml, and combinators to generate random values to run tests on'"; downloadPage = "https://github.com/reasonml/reason-native/tree/master/src/qcheck-rely"; + broken = true; }; } diff --git a/pkgs/development/ocaml-modules/stdint/default.nix b/pkgs/development/ocaml-modules/stdint/default.nix index 52d97e12998..2a4bf2bb633 100644 --- a/pkgs/development/ocaml-modules/stdint/default.nix +++ b/pkgs/development/ocaml-modules/stdint/default.nix @@ -1,4 +1,4 @@ -{ lib, fetchurl, fetchpatch, buildDunePackage, qcheck }: +{ lib, fetchurl, fetchpatch, buildDunePackage, ocaml, qcheck }: buildDunePackage rec { pname = "stdint"; @@ -35,7 +35,7 @@ buildDunePackage rec { 'let pos_int = QCheck.int_range 0 maxi' ''; - doCheck = true; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkInputs = [ qcheck ]; meta = { diff --git a/pkgs/development/ocaml-modules/stringext/default.nix b/pkgs/development/ocaml-modules/stringext/default.nix index 8aaf36baa8b..3d440cf4895 100644 --- a/pkgs/development/ocaml-modules/stringext/default.nix +++ b/pkgs/development/ocaml-modules/stringext/default.nix @@ -1,6 +1,6 @@ { lib, fetchurl, ocaml, buildDunePackage, ounit, qtest # Optionally enable tests; test script use OCaml-4.01+ features -, doCheck ? lib.versionAtLeast ocaml.version "4.04" +, doCheck ? lib.versionAtLeast ocaml.version "4.08" }: let version = "1.6.0"; in diff --git a/pkgs/development/ocaml-modules/syslog-message/default.nix b/pkgs/development/ocaml-modules/syslog-message/default.nix index ba967d87446..2c12415cdbb 100644 --- a/pkgs/development/ocaml-modules/syslog-message/default.nix +++ b/pkgs/development/ocaml-modules/syslog-message/default.nix @@ -1,4 +1,5 @@ { lib, buildDunePackage, fetchurl +, ocaml , astring, ptime, rresult, qcheck }: @@ -21,7 +22,7 @@ buildDunePackage rec { rresult ]; - doCheck = true; + doCheck = lib.versionAtLeast ocaml.version "4.08"; checkInputs = [ qcheck ]; diff --git a/pkgs/development/ocaml-modules/tls/async.nix b/pkgs/development/ocaml-modules/tls/async.nix index ceac7a7c074..0215ac18088 100644 --- a/pkgs/development/ocaml-modules/tls/async.nix +++ b/pkgs/development/ocaml-modules/tls/async.nix @@ -1,4 +1,4 @@ -{ lib, buildDunePackage, tls, async, cstruct-async, core, cstruct, mirage-crypto-rng-async }: +{ lib, buildDunePackage, tls, async, cstruct-async, core, cstruct, mirage-crypto-rng-async, async_find }: buildDunePackage rec { pname = "tls-async"; @@ -12,6 +12,7 @@ buildDunePackage rec { propagatedBuildInputs = [ async + async_find core cstruct cstruct-async diff --git a/pkgs/development/ocaml-modules/tls/default.nix b/pkgs/development/ocaml-modules/tls/default.nix index 5a5479c9fe8..e5c9b7b54b1 100644 --- a/pkgs/development/ocaml-modules/tls/default.nix +++ b/pkgs/development/ocaml-modules/tls/default.nix @@ -5,11 +5,11 @@ buildDunePackage rec { pname = "tls"; - version = "0.13.2"; + version = "0.14.1"; src = fetchurl { url = "https://github.com/mirleft/ocaml-tls/releases/download/v${version}/tls-v${version}.tbz"; - sha256 = "sha256-IE6Fuvem8A3lZ/M8GLNYNwCG+v7BbPQ4QdYS+fKT50c="; + sha256 = "58cf2d517d6eac5b1ccc5eeb656da690aef2125a19c1eca3fbececd858046216"; }; minimumOCamlVersion = "4.08"; diff --git a/pkgs/development/ocaml-modules/x509/default.nix b/pkgs/development/ocaml-modules/x509/default.nix index 85209098559..8330eb27965 100644 --- a/pkgs/development/ocaml-modules/x509/default.nix +++ b/pkgs/development/ocaml-modules/x509/default.nix @@ -8,11 +8,11 @@ buildDunePackage rec { minimumOCamlVersion = "4.07"; pname = "x509"; - version = "0.14.0"; + version = "0.14.1"; src = fetchurl { url = "https://github.com/mirleft/ocaml-x509/releases/download/v${version}/x509-v${version}.tbz"; - sha256 = "9b42f34171261b2193ee662f096566c48c48e087949c186c288f90c9b3b9f498"; + sha256 = "d91eb4f2790f9d098713c71cc4b5d12706aedb1795666b5e6d667fe5c262f9c3"; }; useDune2 = true; diff --git a/pkgs/development/python-modules/ailment/default.nix b/pkgs/development/python-modules/ailment/default.nix index 14a29571313..84e9c9ed89b 100644 --- a/pkgs/development/python-modules/ailment/default.nix +++ b/pkgs/development/python-modules/ailment/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "ailment"; - version = "9.0.10010"; + version = "9.0.10055"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-kEHbuc5gmurMznTyfn/KnZEClLHJgv2CzK4O30dIgTg="; + sha256 = "sha256-RaYwPWKFYbDbWm5lZYk9qaDCgL8HcimIRZasbPPOlqo="; }; propagatedBuildInputs = [ pyvex ]; diff --git a/pkgs/development/python-modules/aiopvapi/default.nix b/pkgs/development/python-modules/aiopvapi/default.nix new file mode 100644 index 00000000000..b8614d0c97d --- /dev/null +++ b/pkgs/development/python-modules/aiopvapi/default.nix @@ -0,0 +1,39 @@ +{ lib +, aiohttp +, async-timeout +, buildPythonPackage +, fetchPypi +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "aiopvapi"; + version = "1.6.14"; + format = "setuptools"; + + disabled = pythonOlder "3.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "02bl7q166j6rb8av9n1jz11xlwhrzmbkjq70mwr86qaj63pcxrak"; + }; + + propagatedBuildInputs = [ + aiohttp + async-timeout + ]; + + checkInputs = [ + pytestCheckHook + ]; + + pythonImportsCheck = [ "aiopvapi" ]; + + meta = with lib; { + description = "Python API for the PowerView API"; + homepage = "https://github.com/sander76/aio-powerview-api"; + license = with licenses; [ bsd3 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/aiounifi/default.nix b/pkgs/development/python-modules/aiounifi/default.nix index 7d6276e53e6..e537222f4df 100644 --- a/pkgs/development/python-modules/aiounifi/default.nix +++ b/pkgs/development/python-modules/aiounifi/default.nix @@ -1,26 +1,44 @@ -{ lib, buildPythonPackage, fetchPypi, isPy3k -, aiohttp }: +{ lib +, aiohttp +, aioresponses +, buildPythonPackage +, fetchFromGitHub +, pytest-aiohttp +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: buildPythonPackage rec { pname = "aiounifi"; - version = "26"; + version = "27"; - disabled = ! isPy3k; + disabled = pythonOlder "3.7"; - src = fetchPypi { - inherit pname version; - sha256 = "3dd0f9fc59edff5d87905ddef3eecc93f974c209d818d3a91061b05925da04af"; + src = fetchFromGitHub { + owner = "Kane610"; + repo = pname; + rev = "v${version}"; + sha256 = "09bxyfrwhqwlfxwgbbnkyd7md9wz05y3fjvc9f0rrj70z7qcicnv"; }; - propagatedBuildInputs = [ aiohttp ]; + propagatedBuildInputs = [ + aiohttp + ]; - # upstream has no tests - doCheck = false; + checkInputs = [ + aioresponses + pytest-aiohttp + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "aiounifi" ]; meta = with lib; { - description = "An asynchronous Python library for communicating with Unifi Controller API"; - homepage = "https://pypi.python.org/pypi/aiounifi/"; - license = licenses.mit; + description = "Python library for communicating with Unifi Controller API"; + homepage = "https://github.com/Kane610/aiounifi"; + license = licenses.mit; maintainers = with maintainers; [ peterhoeg ]; }; } diff --git a/pkgs/development/python-modules/aiowatttime/default.nix b/pkgs/development/python-modules/aiowatttime/default.nix new file mode 100644 index 00000000000..39aa7974313 --- /dev/null +++ b/pkgs/development/python-modules/aiowatttime/default.nix @@ -0,0 +1,53 @@ +{ lib +, aiohttp +, aresponses +, buildPythonPackage +, fetchFromGitHub +, poetry-core +, pytest-aiohttp +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "aiowatttime"; + version = "0.1.1"; + format = "pyproject"; + + disabled = pythonOlder "3.8"; + + src = fetchFromGitHub { + owner = "bachya"; + repo = pname; + rev = version; + sha256 = "1614p5ca7x9ipz7dgwhiz83dfwn6hyliawa8pr2j9y2kn8cg2sdm"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + aresponses + pytest-aiohttp + pytest-asyncio + pytestCheckHook + ]; + + # Ignore the examples directory as the files are prefixed with test_ + disabledTestPaths = [ "examples/" ]; + + pythonImportsCheck = [ "aiowatttime" ]; + + meta = with lib; { + description = "Python library for interacting with WattTime"; + homepage = "https://github.com/bachya/aiowatttime"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/aioymaps/default.nix b/pkgs/development/python-modules/aioymaps/default.nix index 4a6d806dee1..01765f6eedf 100644 --- a/pkgs/development/python-modules/aioymaps/default.nix +++ b/pkgs/development/python-modules/aioymaps/default.nix @@ -7,12 +7,13 @@ buildPythonPackage rec { pname = "aioymaps"; - version = "1.1.0"; + version = "1.2.0"; + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "1rvgf4flvnpjj0sm14xlnfmmnlmkz6xq5h5mfb14amkfy76za3jm"; + sha256 = "sha256-YkSoxYf/Ti/gc1BFSYR24P3OzDrmcGWKhcOcrGpkRjU="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/alot/default.nix b/pkgs/development/python-modules/alot/default.nix index 1117557a8a0..562ec0d2c4d 100644 --- a/pkgs/development/python-modules/alot/default.nix +++ b/pkgs/development/python-modules/alot/default.nix @@ -1,11 +1,11 @@ -{ lib, buildPythonPackage, python, fetchFromGitHub, isPy3k -, notmuch, urwid, urwidtrees, twisted, python_magic, configobj, mock, file, gpgme +{ lib, buildPythonPackage, python, fetchFromGitHub, isPy3k, pytestCheckHook +, notmuch2, urwid, urwidtrees, twisted, python_magic, configobj, mock, file, gpgme , service-identity, gnupg, sphinx, gawk, procps, future , withManpage ? false }: buildPythonPackage rec { pname = "alot"; - version = "0.9.1"; + version = "0.10"; outputs = [ "out" ] ++ lib.optional withManpage "man"; disabled = !isPy3k; @@ -14,7 +14,7 @@ buildPythonPackage rec { owner = "pazz"; repo = "alot"; rev = version; - sha256 = "0s94m17yph1gq9f2svipb3bbwbw1s4j3zf2xkg5h91006v8286r6"; + sha256 = "sha256-1reAq8X9VwaaZDY5UfvcFzHDKd71J88CqJgH3+ANjis="; }; postPatch = '' @@ -24,7 +24,7 @@ buildPythonPackage rec { nativeBuildInputs = lib.optional withManpage sphinx; propagatedBuildInputs = [ - notmuch + notmuch2 urwid urwidtrees twisted @@ -35,11 +35,14 @@ buildPythonPackage rec { gpgme ]; - # some twisted tests need the network (test_env_set... ) - doCheck = false; postBuild = lib.optionalString withManpage "make -C docs man"; - checkInputs = [ gawk future mock gnupg procps ]; + checkInputs = [ gawk future mock gnupg procps pytestCheckHook ]; + # some twisted tests need internet access + disabledTests = [ + "test_env_set" + "test_no_spawn_no_stdin_attached" + ]; postInstall = let completionPython = python.withPackages (ps: [ ps.configobj ]); @@ -61,7 +64,7 @@ buildPythonPackage rec { meta = with lib; { homepage = "https://github.com/pazz/alot"; description = "Terminal MUA using notmuch mail"; - license = licenses.gpl3; + license = licenses.gpl3Plus; platforms = platforms.linux; maintainers = with maintainers; [ edibopp ]; }; diff --git a/pkgs/development/python-modules/angr/default.nix b/pkgs/development/python-modules/angr/default.nix index 7ec9305689b..cf1c5c160cc 100644 --- a/pkgs/development/python-modules/angr/default.nix +++ b/pkgs/development/python-modules/angr/default.nix @@ -43,14 +43,14 @@ in buildPythonPackage rec { pname = "angr"; - version = "9.0.10010"; + version = "9.0.10055"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-UWg3lrBMfQsR09wbx8F2nml8eymk7V60gwFbPXwNqAw="; + sha256 = "sha256-egj24DBP2Bq2GMYOhZZPXmnobpbjxbD2V8MWwZpqhUg="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/angrop/default.nix b/pkgs/development/python-modules/angrop/default.nix index e7a3585c0f5..4b16964fa4f 100644 --- a/pkgs/development/python-modules/angrop/default.nix +++ b/pkgs/development/python-modules/angrop/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "angrop"; - version = "9.0.10010"; + version = "9.0.10055"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-VCVvJI98gyVZC2SPb5hd8FKLTYUhEILJtieb4IQGL2c="; + sha256 = "sha256-OAn57lt25ZmEU62pJLJd+3T0v2nCYRDnwuVhiZfA7Uk="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/arcam-fmj/default.nix b/pkgs/development/python-modules/arcam-fmj/default.nix index 8d74db04d1f..a1f4892a245 100644 --- a/pkgs/development/python-modules/arcam-fmj/default.nix +++ b/pkgs/development/python-modules/arcam-fmj/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "arcam-fmj"; - version = "0.11.1"; + version = "0.12.0"; disabled = pythonOlder "3.8"; @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "elupus"; repo = "arcam_fmj"; rev = version; - sha256 = "sha256-Vs32LGRN6kxG8sswvuUwuUbLv9GXuhJeK0CUGoo2EgE="; + sha256 = "sha256-YkoABsOLEl1gSCRgZr0lLZGzicr3N5KRNLDjfuQhy2U="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/archinfo/default.nix b/pkgs/development/python-modules/archinfo/default.nix index 9ef6cd046d6..6f7f3c47adb 100644 --- a/pkgs/development/python-modules/archinfo/default.nix +++ b/pkgs/development/python-modules/archinfo/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "archinfo"; - version = "9.0.10010"; + version = "9.0.10055"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Eyquud4Cc0bU4z+ElWs/gPzuNRtNKPMxWjSLpwFlBXQ="; + sha256 = "sha256-eQBART7WSAJKQRKNwmR1JKTkrlerHeHVgTK5v0R644Q="; }; checkInputs = [ diff --git a/pkgs/development/python-modules/asttokens/default.nix b/pkgs/development/python-modules/asttokens/default.nix index 251205419fe..1e44ee8fa0e 100644 --- a/pkgs/development/python-modules/asttokens/default.nix +++ b/pkgs/development/python-modules/asttokens/default.nix @@ -29,13 +29,17 @@ buildPythonPackage rec { pytestCheckHook ]; + disabledTests = [ + # Test is currently failing on Hydra, works locally + "test_slices" + ]; + pythonImportsCheck = [ "asttokens" ]; meta = with lib; { homepage = "https://github.com/gristlabs/asttokens"; description = "Annotate Python AST trees with source text and token information"; license = licenses.asl20; - platforms = platforms.all; maintainers = with maintainers; [ leenaars ]; }; } diff --git a/pkgs/development/python-modules/asynccmd/default.nix b/pkgs/development/python-modules/asynccmd/default.nix new file mode 100644 index 00000000000..62342404742 --- /dev/null +++ b/pkgs/development/python-modules/asynccmd/default.nix @@ -0,0 +1,42 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, pythonOlder +}: + +buildPythonPackage rec { + pname = "asynccmd"; + version = "0.2.4"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "valentinmk"; + repo = pname; + rev = version; + sha256 = "02sa0k0zgwv0y8k00pd1yh4x7k7xqhdikk2c0avpih1204lcw26h"; + }; + + patches = [ + # Deprecation of asyncio.Task.all_tasks(), https://github.com/valentinmk/asynccmd/pull/2 + (fetchpatch { + name = "deprecation-python-38.patch"; + url = "https://github.com/valentinmk/asynccmd/commit/12afa60ac07db17e96755e266061f2c88cb545ff.patch"; + sha256 = "0l6sk93gj51qqrpw01a8iiyz14k6dd2z68vr9l9w9vx76l8725yf"; + }) + ]; + + # Tests are outdated + doCheck = false; + + pythonImportsCheck = [ "asynccmd" ]; + + meta = with lib; { + description = "Asyncio implementation of Cmd Python library"; + homepage = "https://github.com/valentinmk/asynccmd"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/awslambdaric/default.nix b/pkgs/development/python-modules/awslambdaric/default.nix index 1826291da50..2ccba6995ad 100644 --- a/pkgs/development/python-modules/awslambdaric/default.nix +++ b/pkgs/development/python-modules/awslambdaric/default.nix @@ -1,5 +1,17 @@ -{ lib, buildPythonPackage, fetchFromGitHub, isPy27, pytestCheckHook, autoconf -, automake, cmake, gcc, libtool, perl, simplejson }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, isPy27 +, pytestCheckHook +, autoconf +, automake +, cmake +, gcc +, libtool +, perl +, simplejson +}: buildPythonPackage rec { pname = "awslambdaric"; @@ -13,6 +25,14 @@ buildPythonPackage rec { sha256 = "1r4b4w5xhf6p4vs7yx89kighlqim9f96v2ryknmrnmblgr4kg0h1"; }; + patches = [ + (fetchpatch { + # https://github.com/aws/aws-lambda-python-runtime-interface-client/pull/58 + url = "https://github.com/aws/aws-lambda-python-runtime-interface-client/commit/162c3c0051bb9daa92e4a2a4af7e90aea60ee405.patch"; + sha256 = "09qqq5x6npc9jw2qbhzifqn5sqiby4smiin1aw30psmlp21fv7j8"; + }) + ]; + postPatch = '' substituteInPlace requirements/base.txt \ --replace 'simplejson==3' 'simplejson~=3' diff --git a/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix b/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix index a63810af11c..40e5cbab3bf 100644 --- a/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix +++ b/pkgs/development/python-modules/azure-mgmt-extendedlocation/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "azure-mgmt-extendedlocation"; - version = "1.0.0b2"; + version = "1.0.0"; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "sha256-mjfH35T81JQ97jVgElWmZ8P5MwXVxZQv/QJKNLS3T8A="; + sha256 = "e2388407dc27b93dec3314bfa64210d3514b98a4f961c410321fb4292b9b3e9a"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/azure-mgmt-netapp/default.nix b/pkgs/development/python-modules/azure-mgmt-netapp/default.nix index dea35069995..dbe22478d7b 100644 --- a/pkgs/development/python-modules/azure-mgmt-netapp/default.nix +++ b/pkgs/development/python-modules/azure-mgmt-netapp/default.nix @@ -6,13 +6,13 @@ }: buildPythonPackage rec { - version = "5.0.0"; + version = "5.1.0"; pname = "azure-mgmt-netapp"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "2d5163c49f91636809ef1cacd48d91130803594855f43afe0f2b31fc5f02d53c"; + sha256 = "306088088ee10e86c4cf24cc82a9ca619db5cdfc0da3fa207d00ec7f77f06e8e"; extension = "zip"; }; diff --git a/pkgs/development/python-modules/cartopy/default.nix b/pkgs/development/python-modules/cartopy/default.nix index d3953137167..73d172941c2 100644 --- a/pkgs/development/python-modules/cartopy/default.nix +++ b/pkgs/development/python-modules/cartopy/default.nix @@ -8,14 +8,21 @@ buildPythonPackage rec { pname = "cartopy"; - version = "0.19.0.post1"; + version = "0.20.0"; src = fetchPypi { inherit version; pname = "Cartopy"; - sha256 = "0xnm8z3as3hriivdfd26s6vn5b63gb46x6vxw6gh1mwfm5rlg2sb"; + sha256 = "eae58aff26806e63cf115b2bce9477cedc4aa9f578c5e477b2c25cfa404f2b7a"; }; + postPatch = '' + # https://github.com/SciTools/cartopy/issues/1880 + substituteInPlace lib/cartopy/tests/test_crs.py \ + --replace "test_osgb(" "dont_test_osgb(" \ + --replace "test_epsg(" "dont_test_epsg(" + ''; + buildInputs = [ geos proj ]; diff --git a/pkgs/development/python-modules/casbin/default.nix b/pkgs/development/python-modules/casbin/default.nix index 5dcdf1cf3f2..a83574629fe 100644 --- a/pkgs/development/python-modules/casbin/default.nix +++ b/pkgs/development/python-modules/casbin/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "casbin"; - version = "1.8.1"; + version = "1.9.1"; disabled = isPy27; @@ -17,7 +17,7 @@ buildPythonPackage rec { owner = pname; repo = "pycasbin"; rev = "v${version}"; - sha256 = "16s1bd8z400cmwz0igai9fdv9qlafwp2fllhy84cfi90yxwh1flp"; + sha256 = "0pwaqajwxkb8c7rnb6cvpz877azs13f1mdq33z5gp2v09fj8s2b0"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/claripy/default.nix b/pkgs/development/python-modules/claripy/default.nix index 1db9b5959e6..e403891726a 100644 --- a/pkgs/development/python-modules/claripy/default.nix +++ b/pkgs/development/python-modules/claripy/default.nix @@ -13,14 +13,14 @@ buildPythonPackage rec { pname = "claripy"; - version = "9.0.10010"; + version = "9.0.10055"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-bcVbGDUTVLQ6ybPA2HjRlHJj1gnYK2dazhZXc9k0uSY="; + sha256 = "sha256-QHhZVnUv54I8R7oCOBJgBcKZr8csg2OEOGxn4MKgmtk="; }; # Use upstream z3 implementation diff --git a/pkgs/development/python-modules/class-registry/default.nix b/pkgs/development/python-modules/class-registry/default.nix index 3faf07966d0..1accefe5f1e 100644 --- a/pkgs/development/python-modules/class-registry/default.nix +++ b/pkgs/development/python-modules/class-registry/default.nix @@ -1,32 +1,32 @@ -{ - buildPythonPackage, - fetchPypi, - lib, - nose, - six, - typing ? null, - isPy27, +{ lib +, buildPythonPackage +, fetchFromGitHub +, nose +, pythonOlder }: buildPythonPackage rec { pname = "class-registry"; - version = "2.1.2"; + version = "3.0.5"; + disabled = pythonOlder "3.5"; - src = fetchPypi { - inherit pname version; - sha256 = "0zjf9nczl1ifzj07bgs6mwxsfd5xck9l0lchv2j0fv2n481xp2v7"; + src = fetchFromGitHub { + owner = "todofixthis"; + repo = pname; + rev = version; + sha256 = "0gpvq4a6qrr2iki6b4vxarjr1jrsw560m2qzm5bb43ix8c8b7y3q"; }; - propagatedBuildInputs = [ six ] ++ lib.optional isPy27 typing; - checkInputs = [ nose ]; + checkInputs = [ + nose + ]; - # Tests currently failing. - doCheck = false; + pythonImportsCheck = [ "class_registry" ]; - meta = { - description = "Factory+Registry pattern for Python classes."; + meta = with lib; { + description = "Factory and registry pattern for Python classes"; homepage = "https://class-registry.readthedocs.io/en/latest/"; - license = lib.licenses.mit; - maintainers = with lib.maintainers; [ kevincox ]; + license = licenses.mit; + maintainers = with maintainers; [ kevincox ]; }; } diff --git a/pkgs/development/python-modules/cle/default.nix b/pkgs/development/python-modules/cle/default.nix index 3d709b749d2..0a55542b487 100644 --- a/pkgs/development/python-modules/cle/default.nix +++ b/pkgs/development/python-modules/cle/default.nix @@ -15,7 +15,7 @@ let # The binaries are following the argr projects release cycle - version = "9.0.10010"; + version = "9.0.10055"; # Binary files from https://github.com/angr/binaries (only used for testing and only here) binaries = fetchFromGitHub { @@ -35,7 +35,7 @@ buildPythonPackage rec { owner = "angr"; repo = pname; rev = "v${version}"; - sha256 = "sha256-Fq/xkcG6wLRaXG37UEf/3r+EsacpkP2iA+HZLT05ETg="; + sha256 = "sha256-fqnumSz3BfpG5/ReQQOhSGvsOMuinLs8q2HlPAxYQWM="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/deezer-py/default.nix b/pkgs/development/python-modules/deezer-py/default.nix index a79a30da822..12ee63c0fd1 100644 --- a/pkgs/development/python-modules/deezer-py/default.nix +++ b/pkgs/development/python-modules/deezer-py/default.nix @@ -7,12 +7,12 @@ buildPythonPackage rec { pname = "deezer-py"; - version = "1.2.3"; + version = "1.2.4"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "f4dd648e5bf251cb13316145e243d3a08d870840e0ac1525309926e640c91ea9"; + sha256 = "1b5664835975fda7a2519ba4b411cc5f2e4113e614ee140389b61844906d0c05"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/elkm1-lib/default.nix b/pkgs/development/python-modules/elkm1-lib/default.nix new file mode 100644 index 00000000000..05625f92839 --- /dev/null +++ b/pkgs/development/python-modules/elkm1-lib/default.nix @@ -0,0 +1,56 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, poetry-core +, pyserial-asyncio +, pytest-asyncio +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "elkm1-lib"; + version = "1.0.0"; + format = "pyproject"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "gwww"; + repo = "elkm1"; + rev = version; + sha256 = "04xidix6l5d9rqfwp6cmj6wvais04nlvz5ynp0zwgyjp9sh2nhp6"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + pyserial-asyncio + ]; + + checkInputs = [ + pytest-asyncio + pytestCheckHook + ]; + + patches = [ + # Switch to poetry-core, https://github.com/gwww/elkm1/pull/45 + (fetchpatch { + name = "switch-to-poetry-core.patch"; + url = "https://github.com/gwww/elkm1/commit/807a17268498298908bf82af4933b158b37c8f32.patch"; + sha256 = "1539g8wsxppqj6dm6w81ps05frb8vrfaxahxn2cqs76zdhvly3p9"; + }) + ]; + + pythonImportsCheck = [ "elkm1_lib" ]; + + meta = with lib; { + description = "Python module for interacting with ElkM1 alarm/automation panel"; + homepage = "https://github.com/gwww/elkm1"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/emoji/default.nix b/pkgs/development/python-modules/emoji/default.nix index 1c800cdce63..2b20c7de4a3 100644 --- a/pkgs/development/python-modules/emoji/default.nix +++ b/pkgs/development/python-modules/emoji/default.nix @@ -6,13 +6,13 @@ buildPythonPackage rec { pname = "emoji"; - version = "1.5.0"; + version = "1.5.2"; src = fetchFromGitHub { owner = "carpedm20"; repo = pname; rev = "v${version}"; - sha256 = "1b75p1ia4ip6aq1657pdwpspvhyjw6dpsrglj2qlql2gdmcm8sp8"; + sha256 = "11v8zqz183vpiyg2cp0fghb1hxqsn3yaydm1d97nqd9g2mfy37s1"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/eternalegypt/default.nix b/pkgs/development/python-modules/eternalegypt/default.nix new file mode 100644 index 00000000000..c5c7d8a646c --- /dev/null +++ b/pkgs/development/python-modules/eternalegypt/default.nix @@ -0,0 +1,39 @@ +{ lib +, aiohttp +, attrs +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "eternalegypt"; + version = "0.0.13"; + format = "setuptools"; + + disabled = pythonOlder "3.8"; + + src = fetchFromGitHub { + owner = "amelchio"; + repo = pname; + rev = "v${version}"; + sha256 = "0wi2cqd81irqm873npkqg3mvdrb57idqdsp8qw8h0s7lk0kil1wi"; + }; + + propagatedBuildInputs = [ + aiohttp + attrs + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "eternalegypt" ]; + + meta = with lib; { + description = "Python API for Netgear LTE modems"; + homepage = "https://github.com/amelchio/eternalegypt"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/fe25519/default.nix b/pkgs/development/python-modules/fe25519/default.nix index 466de64453f..193d7aa60de 100644 --- a/pkgs/development/python-modules/fe25519/default.nix +++ b/pkgs/development/python-modules/fe25519/default.nix @@ -10,11 +10,11 @@ buildPythonPackage rec { pname = "fe25519"; - version = "0.2.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "1m85qvw9dwxk81mv9k45c9n75pk8wqn70qkinqh56h5zv56vgq24"; + sha256 = "sha256-947DIkmg56mAegEgLKq8iqETWf2SCvtmeDZi5cxVSJA="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/filetype/default.nix b/pkgs/development/python-modules/filetype/default.nix index 4bbb6c41f54..2ec3807476d 100644 --- a/pkgs/development/python-modules/filetype/default.nix +++ b/pkgs/development/python-modules/filetype/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "filetype"; - version = "1.0.7"; + version = "1.0.8"; src = fetchPypi { inherit pname version; - sha256 = "19vav4w8vvcnrps1mirjkrv4pr1khwn5ma6m5pgpxd4qip73wffs"; + sha256 = "77df14879b73fd9711b8bd4f465dadf2ecdafff0eac3b22c0bdb0ccba68db316"; }; checkPhase = '' diff --git a/pkgs/development/python-modules/flask-appbuilder/default.nix b/pkgs/development/python-modules/flask-appbuilder/default.nix index b7b81b6b446..cf9924f5289 100644 --- a/pkgs/development/python-modules/flask-appbuilder/default.nix +++ b/pkgs/development/python-modules/flask-appbuilder/default.nix @@ -25,12 +25,12 @@ buildPythonPackage rec { pname = "flask-appbuilder"; - version = "3.3.2"; + version = "3.3.3"; src = fetchPypi { pname = "Flask-AppBuilder"; inherit version; - sha256 = "1js1nbal020ilqdrmd471zjab9jj6489fxy4583n55bh5fyiac6i"; + sha256 = "sha256-yjb4dpcQt2se5GT+wodh4UC9LAF4JmYrdX89VIdkk0U="; }; # See here: https://github.com/dpgaspar/Flask-AppBuilder/commit/7097a7b133f27c78d2b54d2a46e4a4c24478a066.patch @@ -63,8 +63,7 @@ buildPythonPackage rec { postPatch = '' substituteInPlace setup.py \ - --replace "apispec[yaml]>=3.3, <4" "apispec[yaml] >=3.3, <5" \ - --replace "click>=6.7, <8" "click" \ + --replace "apispec[yaml]>=3.3, <4" "apispec[yaml] >=3.3" \ --replace "Flask>=0.12, <2" "Flask" \ --replace "Flask-Login>=0.3, <0.5" "Flask-Login >=0.3, <0.6" \ --replace "Flask-Babel>=1, <2" "Flask-Babel >=1, <3" \ @@ -72,6 +71,7 @@ buildPythonPackage rec { --replace "marshmallow-sqlalchemy>=0.22.0, <0.24.0" "marshmallow-sqlalchemy" \ --replace "Flask-JWT-Extended>=3.18, <4" "Flask-JWT-Extended>=4.1.0" \ --replace "PyJWT>=1.7.1, <2.0.0" "PyJWT>=2.0.1" \ + --replace "prison>=0.2.1, <1.0.0" "prison" \ --replace "SQLAlchemy<1.4.0" "SQLAlchemy" ''; diff --git a/pkgs/development/python-modules/flipr-api/default.nix b/pkgs/development/python-modules/flipr-api/default.nix new file mode 100644 index 00000000000..418c7cf42fe --- /dev/null +++ b/pkgs/development/python-modules/flipr-api/default.nix @@ -0,0 +1,60 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, fetchpatch +, poetry-core +, requests-mock +, pythonOlder +, pytest-asyncio +, pytestCheckHook +, python-dateutil +, requests +}: + +buildPythonPackage rec { + pname = "flipr-api"; + version = "1.4.1"; + format = "pyproject"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "cnico"; + repo = pname; + rev = version; + sha256 = "00qkzr2g38fpa7ndnbfx9m4d50lmz0j74nkxif3amnkbl4m6l5vn"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + python-dateutil + requests + ]; + + checkInputs = [ + requests-mock + pytest-asyncio + pytestCheckHook + ]; + + patches = [ + # Switch to poetry-core, https://github.com/cnico/flipr-api/pull/4 + (fetchpatch { + name = "switch-to-poetry-core.patch"; + url = "https://github.com/cnico/flipr-api/commit/f14be1dfd4f46d4d43d9ea47e51cafca3cc18e86.patch"; + sha256 = "1fdi19cq21zcjx4g132k480yhi5y0x5qj2l0h8k5zky5cdxs58r6"; + }) + ]; + + pythonImportsCheck = [ "flipr_api" ]; + + meta = with lib; { + description = "Python client for Flipr API"; + homepage = "https://github.com/cnico/flipr-api"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/fountains/default.nix b/pkgs/development/python-modules/fountains/default.nix index 690f3dcbd3d..aec78779a7a 100644 --- a/pkgs/development/python-modules/fountains/default.nix +++ b/pkgs/development/python-modules/fountains/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "fountains"; - version = "1.1.0"; + version = "1.1.1"; src = fetchPypi { inherit pname version; - sha256 = "47c28e598cc3a723327daee28c757de3a40f4d8eb48e6be37081932c1d00fa6f"; + sha256 = "fbf4e2cb11d60d3bafca5bb7c01c254d08a5541ed7ddfe00ef975eb173fb75a4"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/fritzconnection/default.nix b/pkgs/development/python-modules/fritzconnection/default.nix index 97396595608..5cb1bac8788 100644 --- a/pkgs/development/python-modules/fritzconnection/default.nix +++ b/pkgs/development/python-modules/fritzconnection/default.nix @@ -1,19 +1,24 @@ -{ lib, buildPythonPackage, pythonOlder, fetchFromGitHub, pytestCheckHook, requests }: +{ lib +, buildPythonPackage +, pythonOlder +, fetchFromGitHub +, pytestCheckHook +, requests +}: buildPythonPackage rec { pname = "fritzconnection"; - version = "1.6.0"; + version = "1.7.0"; + + disabled = pythonOlder "3.6"; - # no tests on PyPI src = fetchFromGitHub { owner = "kbr"; repo = pname; rev = version; - sha256 = "16sbv6ql6jd13lim88z8vl5205xppza10340bmq5m5f3lvzb7mpc"; + sha256 = "sha256-1HzeNtSqzqr9zyxF1PVWi6QfRupw8huMYmdFI6rzIdY="; }; - disabled = pythonOlder "3.6"; - propagatedBuildInputs = [ requests ]; checkInputs = [ pytestCheckHook ]; @@ -21,7 +26,7 @@ buildPythonPackage rec { pythonImportsCheck = [ "fritzconnection" ]; meta = with lib; { - description = "Python-Tool to communicate with the AVM Fritz!Box"; + description = "Python module to communicate with the AVM Fritz!Box"; homepage = "https://github.com/kbr/fritzconnection"; changelog = "https://fritzconnection.readthedocs.io/en/${version}/sources/changes.html"; license = licenses.mit; diff --git a/pkgs/development/python-modules/ge25519/default.nix b/pkgs/development/python-modules/ge25519/default.nix index 0e8d3722fbe..1a00108a8f8 100644 --- a/pkgs/development/python-modules/ge25519/default.nix +++ b/pkgs/development/python-modules/ge25519/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "ge25519"; - version = "0.2.0"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "1wgv0vqg8iv9y5d7if14gmcgslwd5zzgk322w9jaxdfbndldddik"; + sha256 = "sha256-f7xvZ92zRO3GLSdfgEyhkWVwAFT2TvKHy6+iF+k43bI="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/geopandas/default.nix b/pkgs/development/python-modules/geopandas/default.nix index 7bd45a2b46e..82acdbb8548 100644 --- a/pkgs/development/python-modules/geopandas/default.nix +++ b/pkgs/development/python-modules/geopandas/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, buildPythonPackage, fetchFromGitHub, pythonOlder +{ lib, stdenv, buildPythonPackage, fetchFromGitHub, fetchpatch, pythonOlder , pandas, shapely, fiona, pyproj , pytestCheckHook, Rtree }: @@ -14,6 +14,19 @@ buildPythonPackage rec { sha256 = "sha256-58X562OkRzZ4UTNMTwXW4U5czoa5tbSMBCcE90DqbaE="; }; + patches = [ + (fetchpatch { + name = "skip-pandas-master-fillna-test.patch"; + url = "https://github.com/geopandas/geopandas/pull/1878.patch"; + sha256 = "1yw3i4dbhaq7f02n329b9y2cqxbwlz9db81mhgrfc7af3whwysdb"; + }) + (fetchpatch { + name = "fix-proj4strings-test.patch"; + url = "https://github.com/geopandas/geopandas/pull/1958.patch"; + sha256 = "0kzmpq5ry87yvhqr6gnh9p2606b06d3ynzjvw0hpp9fncczpc2yn"; + }) + ]; + propagatedBuildInputs = [ pandas shapely diff --git a/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix b/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix index 27e79bdd060..8f957053091 100644 --- a/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix +++ b/pkgs/development/python-modules/google-cloud-appengine-logging/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-appengine-logging"; - version = "0.1.4"; + version = "0.1.5"; src = fetchPypi { inherit pname version; - sha256 = "sha256-1E+3fXcGsIbTh7nXnBOcVT1UtY3cjulnu/MqU+e77lY="; + sha256 = "9d31647238a8ee05abd0a860bf333ccdda3d6540059fbf3c75c28cf58ee8dc4e"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google-cloud-asset/default.nix b/pkgs/development/python-modules/google-cloud-asset/default.nix index 737df80f39a..18c427a75f9 100644 --- a/pkgs/development/python-modules/google-cloud-asset/default.nix +++ b/pkgs/development/python-modules/google-cloud-asset/default.nix @@ -16,11 +16,11 @@ buildPythonPackage rec { pname = "google-cloud-asset"; - version = "3.5.0"; + version = "3.6.0"; src = fetchPypi { inherit pname version; - sha256 = "7d7218ffdd17d64184e1de69ef016f1f070bb0c888785510c4731948b078067d"; + sha256 = "4aa14659d1b406d98b7d39f5d7b9399c4eaeb0c0b9f669fe51a5ac45a28b784e"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix b/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix index 3d18612d101..9e46a9ecf3c 100644 --- a/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix +++ b/pkgs/development/python-modules/google-cloud-bigquery-logging/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-bigquery-logging"; - version = "0.2.1"; + version = "0.2.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-5ixj9MnJVVcU9NR4ZBe0TAp8ogJLAKrPlyGm5d/iQwA="; + sha256 = "2dc15be4fdcd574c23124bfc0a678c864581038c96b86275c7b41d9fced06534"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google-cloud-container/default.nix b/pkgs/development/python-modules/google-cloud-container/default.nix index fccae98ac06..9bac30fd3c1 100644 --- a/pkgs/development/python-modules/google-cloud-container/default.nix +++ b/pkgs/development/python-modules/google-cloud-container/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-container"; - version = "2.7.1"; + version = "2.8.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-nMUMGFU383TC7cXkj6EHaEe4HHS5NzcLBIxp1xgWUzg="; + sha256 = "f58192b534b5324c874547835808ed7d5c116e986f07e57b27b0ac5e12baddca"; }; propagatedBuildInputs = [ google-api-core grpc-google-iam-v1 libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-datacatalog/default.nix b/pkgs/development/python-modules/google-cloud-datacatalog/default.nix index 64cf1b25364..6e9bf1aa29e 100644 --- a/pkgs/development/python-modules/google-cloud-datacatalog/default.nix +++ b/pkgs/development/python-modules/google-cloud-datacatalog/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-datacatalog"; - version = "3.4.1"; + version = "3.4.2"; src = fetchPypi { inherit pname version; - sha256 = "ad1bf9991bdee2a2fee44d19e54790a6eb900652841a5d7a32aa1c468a196f49"; + sha256 = "f16ff1bb49ff760cdc0ff30bbc352f0c27b8bdd2ba76d8bf22e0fd9af3a2ca16"; }; propagatedBuildInputs = [ libcst google-api-core grpc-google-iam-v1 proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-error-reporting/default.nix b/pkgs/development/python-modules/google-cloud-error-reporting/default.nix index 28d2d538e07..e9bf6f82d02 100644 --- a/pkgs/development/python-modules/google-cloud-error-reporting/default.nix +++ b/pkgs/development/python-modules/google-cloud-error-reporting/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-error-reporting"; - version = "1.2.2"; + version = "1.2.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-LKESEpQLvjmyo8VcZ1fxMcPCbUE+mxvmnexoZEKramc="; + sha256 = "5a7d742ab1c94525a68c75c94ccb7af3f19759627ebe7869fe16db158f0eba4e"; }; postPatch = '' diff --git a/pkgs/development/python-modules/google-cloud-firestore/default.nix b/pkgs/development/python-modules/google-cloud-firestore/default.nix index c0ec04b4330..f476dcea7a4 100644 --- a/pkgs/development/python-modules/google-cloud-firestore/default.nix +++ b/pkgs/development/python-modules/google-cloud-firestore/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "google-cloud-firestore"; - version = "2.3.2"; + version = "2.3.3"; src = fetchPypi { inherit pname version; - sha256 = "6e2eb65ccd75c6579214fb2099cfb98c57b2b4907ccb38a2ed21f00f492b7a50"; + sha256 = "ef7572cbc83412dbc9cadd95962e77bfa9962a5cb030706638a4aafa7cad84aa"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google-cloud-iam-logging/default.nix b/pkgs/development/python-modules/google-cloud-iam-logging/default.nix index 9e5dd9fa214..9cc1d8252ee 100644 --- a/pkgs/development/python-modules/google-cloud-iam-logging/default.nix +++ b/pkgs/development/python-modules/google-cloud-iam-logging/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-iam-logging"; - version = "0.1.2"; + version = "0.1.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-yX58Pq2+YB3ylN92RUIGlQKnvKYD7sabCKtZsDNV5sc="; + sha256 = "5d1847f44a23a2fba815cbfbe7391a0364fd6a5c088fcd5f5a09d454aad8cc7c"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/google-cloud-iam/default.nix b/pkgs/development/python-modules/google-cloud-iam/default.nix index 0daff0ac2cd..702deeb6eb6 100644 --- a/pkgs/development/python-modules/google-cloud-iam/default.nix +++ b/pkgs/development/python-modules/google-cloud-iam/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "google-cloud-iam"; - version = "2.3.1"; + version = "2.3.2"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "166pcra1x8lisgf7cla4vq97qpc1hrpwnvlj1sza1igny2m59w5i"; + sha256 = "c59ceebe2ff5d45a7367ddbe1a702bbbb010d6d3423d278797835d59e885fa50"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-iot/default.nix b/pkgs/development/python-modules/google-cloud-iot/default.nix index f3a56429273..507ba6aef18 100644 --- a/pkgs/development/python-modules/google-cloud-iot/default.nix +++ b/pkgs/development/python-modules/google-cloud-iot/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-iot"; - version = "2.2.1"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "sha256-vMzq4ffA7877zRtdZ+VpFdEHU0BZhDdhgxuk5154hMU="; + sha256 = "cb31a864be75c47880748b6c81f0c57cbce190a87e402ce32b2b772be2dba5fa"; }; propagatedBuildInputs = [ grpc-google-iam-v1 google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-kms/default.nix b/pkgs/development/python-modules/google-cloud-kms/default.nix index 98c4fc55044..2264cb74824 100644 --- a/pkgs/development/python-modules/google-cloud-kms/default.nix +++ b/pkgs/development/python-modules/google-cloud-kms/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-kms"; - version = "2.6.0"; + version = "2.6.1"; src = fetchPypi { inherit pname version; - sha256 = "44be4673ad0a327ea6447967216e124fcd4c7487ca886f000446f6db209988af"; + sha256 = "ccf90b2a14098258648364dc16a0a58a3d281b8c7c6050fb9c05640c3809e7bb"; }; propagatedBuildInputs = [ grpc-google-iam-v1 google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-monitoring/default.nix b/pkgs/development/python-modules/google-cloud-monitoring/default.nix index 9a5469d9891..938c97689aa 100644 --- a/pkgs/development/python-modules/google-cloud-monitoring/default.nix +++ b/pkgs/development/python-modules/google-cloud-monitoring/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "google-cloud-monitoring"; - version = "2.5.0"; + version = "2.5.1"; src = fetchPypi { inherit pname version; - sha256 = "d3d436fab7f50f69bdd47655871ac923e4dcbaf8538808bbe31cf0a3cbdf3514"; + sha256 = "f8b3842fd11965a3872622988359a21bff62bd1b7b9be3ccf095b7ae2f4c796f"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-org-policy/default.nix b/pkgs/development/python-modules/google-cloud-org-policy/default.nix index b2e57af84d2..95142cc6a5e 100644 --- a/pkgs/development/python-modules/google-cloud-org-policy/default.nix +++ b/pkgs/development/python-modules/google-cloud-org-policy/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-org-policy"; - version = "1.0.1"; + version = "1.0.2"; src = fetchPypi { inherit pname version; - sha256 = "12qwiqb7xrnq42z777j5nxdgka3vv411l9cngka6cr6mx4s83c9l"; + sha256 = "e5489dffc6b6558125e548bc8c5be78f13d11bb9916470992816e6ed66a9d7fb"; }; propagatedBuildInputs = [ google-api-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-os-config/default.nix b/pkgs/development/python-modules/google-cloud-os-config/default.nix index b521854c4b1..5dc2f5eeadf 100644 --- a/pkgs/development/python-modules/google-cloud-os-config/default.nix +++ b/pkgs/development/python-modules/google-cloud-os-config/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "google-cloud-os-config"; - version = "1.5.0"; + version = "1.5.1"; src = fetchPypi { inherit pname version; - sha256 = "69764c406c8e1a95b66a84c042b7023c13eaef3bf79e493e60edd9ce62e8f2e4"; + sha256 = "4dc498d6fede223049c415f301ba1129ecaf628f31a77ae87d2678e6d71556f6"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-redis/default.nix b/pkgs/development/python-modules/google-cloud-redis/default.nix index e149f031b9d..6ee8ccc3e96 100644 --- a/pkgs/development/python-modules/google-cloud-redis/default.nix +++ b/pkgs/development/python-modules/google-cloud-redis/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-redis"; - version = "2.2.2"; + version = "2.2.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-lxjxkBK/7up+t2dF2hZz3QXeXLwo9L0Z78mH6aC4Icc="; + sha256 = "2a95ad2d99cfc480513bfaf6b301829446a0f50503d07f54524873d723e585b7"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-securitycenter/default.nix b/pkgs/development/python-modules/google-cloud-securitycenter/default.nix index 79fe9221d18..cf9a0259ca3 100644 --- a/pkgs/development/python-modules/google-cloud-securitycenter/default.nix +++ b/pkgs/development/python-modules/google-cloud-securitycenter/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-securitycenter"; - version = "1.5.0"; + version = "1.5.1"; src = fetchPypi { inherit pname version; - sha256 = "sha256-DrdzC7Oe/8cq41OLcN51Qm208L0zPa9cxscHqmYji04="; + sha256 = "86ec5b1a52b46b57b1150982a661b12a0f971d602d8fc881d4f7081d331d2cb5"; }; propagatedBuildInputs = [ grpc-google-iam-v1 google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-speech/default.nix b/pkgs/development/python-modules/google-cloud-speech/default.nix index 59d08bd8e5e..9eb3fcf2423 100644 --- a/pkgs/development/python-modules/google-cloud-speech/default.nix +++ b/pkgs/development/python-modules/google-cloud-speech/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-speech"; - version = "2.9.0"; + version = "2.9.1"; src = fetchPypi { inherit pname version; - sha256 = "2368beb60e5cdeb6db527509cdcc8fc1156eddfc0c73da8f62d60658a551eee1"; + sha256 = "321a11863124d2fba73c519594d5a8803650f1f4323b08b9de3d096e536e98c1"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-tasks/default.nix b/pkgs/development/python-modules/google-cloud-tasks/default.nix index db74ce39812..138637d70a7 100644 --- a/pkgs/development/python-modules/google-cloud-tasks/default.nix +++ b/pkgs/development/python-modules/google-cloud-tasks/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-tasks"; - version = "2.5.1"; + version = "2.5.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-4QOKG7Forf3x5l1XQbbX4A8upIxe+eCiwhPily26du4="; + sha256 = "af870971187b3d58fc87a81323cabec1628fac910c6af82076dd6270b111f17e"; }; propagatedBuildInputs = [ google-api-core grpc-google-iam-v1 libcst proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-texttospeech/default.nix b/pkgs/development/python-modules/google-cloud-texttospeech/default.nix index b2af89fff50..201e0ce821f 100644 --- a/pkgs/development/python-modules/google-cloud-texttospeech/default.nix +++ b/pkgs/development/python-modules/google-cloud-texttospeech/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-texttospeech"; - version = "2.5.2"; + version = "2.5.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-LcX7qSGMBMU72ZTNBLKaDd+M/2En+mc7/IZsZg2dF9I="; + sha256 = "2672f5caf518105fe9389269efd59a0761ad48b8140e68bac3f6a5062be9d8a4"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-trace/default.nix b/pkgs/development/python-modules/google-cloud-trace/default.nix index 4201506871e..b77e71fdf47 100644 --- a/pkgs/development/python-modules/google-cloud-trace/default.nix +++ b/pkgs/development/python-modules/google-cloud-trace/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "google-cloud-trace"; - version = "1.3.2"; + version = "1.3.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-N2Y/DZXyxMSw+S/s58iJvrK/p2FM/B5O467Pctr+tdQ="; + sha256 = "6635ddbc90a4eeabaae3885dff13e9169b87c3ac934209ce6db46bfbf0925afb"; }; propagatedBuildInputs = [ google-api-core google-cloud-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-videointelligence/default.nix b/pkgs/development/python-modules/google-cloud-videointelligence/default.nix index ed719f0de1a..942c100a596 100644 --- a/pkgs/development/python-modules/google-cloud-videointelligence/default.nix +++ b/pkgs/development/python-modules/google-cloud-videointelligence/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-videointelligence"; - version = "2.3.2"; + version = "2.3.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-+2HwsRZM/h2eVmX6uVEb1s9etDggoGuQg3qj7hXj/AQ="; + sha256 = "bb3a98b5b8044be80c5fdbd76e7acd9b9bdd6026729a53eae9692a9a6c6683ef"; }; propagatedBuildInputs = [ google-api-core proto-plus ]; diff --git a/pkgs/development/python-modules/google-cloud-vision/default.nix b/pkgs/development/python-modules/google-cloud-vision/default.nix index fe5860dc2b0..b3952f222fe 100644 --- a/pkgs/development/python-modules/google-cloud-vision/default.nix +++ b/pkgs/development/python-modules/google-cloud-vision/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-vision"; - version = "2.4.2"; + version = "2.4.3"; src = fetchPypi { inherit pname version; - sha256 = "sha256-BZiBSH2nZ2tnHi6K1+Ii5i/ZrGJyyH1+6hurmqVfYcM="; + sha256 = "4a7b1c025baedae220abef612dc01b822665e5db83d680d9a31be4e0a8490e3a"; }; propagatedBuildInputs = [ libcst google-api-core proto-plus]; diff --git a/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix b/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix index cbe06a72269..4b328e139ec 100644 --- a/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix +++ b/pkgs/development/python-modules/google-cloud-websecurityscanner/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "google-cloud-websecurityscanner"; - version = "1.4.1"; + version = "1.4.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-oq7AMZ1so8IR7nn8fIhUr4oOJEJp1FQPxiJIh+1bMLA="; + sha256 = "593e73edb31ecb8e079c83c65dca29a593208f81a7506e6ef20aeecf611f2a9d"; }; propagatedBuildInputs = [ google-api-core libcst proto-plus ]; diff --git a/pkgs/development/python-modules/gphoto2/default.nix b/pkgs/development/python-modules/gphoto2/default.nix index 31ac03347cb..ddc638b55cb 100644 --- a/pkgs/development/python-modules/gphoto2/default.nix +++ b/pkgs/development/python-modules/gphoto2/default.nix @@ -4,11 +4,11 @@ buildPythonPackage rec { pname = "gphoto2"; - version = "2.2.4"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "48b4c4ab70826d3ddaaf7440564d513c02d78680fa690994b0640d383ffb8a7d"; + sha256 = "a208264ed252a39b29a0b0f7ccc4c4ffb941398715aec84c3a547281a43c4eb8"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/pkgs/development/python-modules/grpcio-tools/default.nix b/pkgs/development/python-modules/grpcio-tools/default.nix index eb27a5596bc..690e4e8141e 100644 --- a/pkgs/development/python-modules/grpcio-tools/default.nix +++ b/pkgs/development/python-modules/grpcio-tools/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "grpcio-tools"; - version = "1.40.0"; + version = "1.41.0"; src = fetchPypi { inherit pname version; - sha256 = "d440f2bc089ff628618c536904d5bc39d0b44f7afdda4c4c1ecd15fcf385bfba"; + sha256 = "3891b1df82369acbc8451d4952cd20755f49a82398dce62437511ad17b47290e"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/python-modules/hijri-converter/default.nix b/pkgs/development/python-modules/hijri-converter/default.nix index ce2acc33a9f..ba9511a078d 100644 --- a/pkgs/development/python-modules/hijri-converter/default.nix +++ b/pkgs/development/python-modules/hijri-converter/default.nix @@ -6,15 +6,17 @@ buildPythonPackage rec { pname = "hijri-converter"; - version = "2.2.0"; + version = "2.2.2"; src = fetchPypi { inherit pname version; - sha256 = "sha256-25pfMciEJUFjr2ocOb6ByAel6Je6lYdiTWcG3RBI8WA="; + sha256 = "sha256-1KENsAnBQXWSu/s96+yt+gTY2NXVG2Spcelp12Gp8+E="; }; checkInputs = [ pytestCheckHook ]; + pythonImportsCheck = [ "hijri_converter" ]; + meta = with lib; { description = "Accurate Hijri-Gregorian date converter based on the Umm al-Qura calendar"; homepage = "https://github.com/dralshehri/hijri-converter"; diff --git a/pkgs/development/python-modules/holidays/default.nix b/pkgs/development/python-modules/holidays/default.nix index 48892b8d79e..0c435357f95 100644 --- a/pkgs/development/python-modules/holidays/default.nix +++ b/pkgs/development/python-modules/holidays/default.nix @@ -12,12 +12,12 @@ buildPythonPackage rec { pname = "holidays"; - version = "0.11.2"; + version = "0.11.3"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0nqxan6nr3jp63i3sbb9s1v5dlig22bl927a6pl1ahks8cnr7rkn"; + sha256 = "b7bff8f9d7090656aee3c54c252c9e356785ee566c67de4af800ddbfa888bc77"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/imdbpy/default.nix b/pkgs/development/python-modules/imdbpy/default.nix index ab7575f99be..ab4d2a5ce0c 100644 --- a/pkgs/development/python-modules/imdbpy/default.nix +++ b/pkgs/development/python-modules/imdbpy/default.nix @@ -1,25 +1,34 @@ -{ lib, buildPythonPackage, fetchPypi, lxml, sqlalchemy }: +{ lib +, buildPythonPackage +, fetchPypi +, lxml +, sqlalchemy +}: buildPythonPackage rec { - pname = "IMDbPY"; + pname = "imdbpy"; version = "2021.4.18"; src = fetchPypi { - inherit pname version; + pname = "IMDbPY"; + inherit version; sha256 = "af57f03638ba3b8ab3d696bfef0eeaf6414385c85f09260aba0a16b32174853f"; }; - patches = [ ./sql_error.patch ]; # Already fixed in master, but not yet in the current release. This can be removed upon the next version update + propagatedBuildInputs = [ + lxml + sqlalchemy + ]; - propagatedBuildInputs = [ lxml sqlalchemy ]; + # Tests require networking, and https://github.com/alberanid/imdbpy/issues/240 + doCheck = false; - doCheck = false; # Tests require networking, and https://github.com/alberanid/imdbpy/issues/240 pythonImportsCheck = [ "imdb" ]; meta = with lib; { + description = "Python package for retrieving and managing the data of the IMDb database"; homepage = "https://imdbpy.github.io/"; - description = "A Python package for retrieving and managing the data of the IMDb database"; - maintainers = [ maintainers.ivar ]; license = licenses.gpl2Only; + maintainers = with maintainers; [ ivar ]; }; } diff --git a/pkgs/development/python-modules/imdbpy/sql_error.patch b/pkgs/development/python-modules/imdbpy/sql_error.patch deleted file mode 100644 index 10770f4f113..00000000000 --- a/pkgs/development/python-modules/imdbpy/sql_error.patch +++ /dev/null @@ -1,39 +0,0 @@ -diff --git a/imdb/parser/sql/__init__.py b/imdb/parser/sql/__init__.py -index cd4a3e3..3fcfdd4 100644 ---- a/imdb/parser/sql/__init__.py -+++ b/imdb/parser/sql/__init__.py -@@ -557,7 +557,6 @@ class IMDbSqlAccessSystem(IMDbBase): - """The class used to access IMDb's data through a SQL database.""" - - accessSystem = 'sql' -- _sql_logger = logging.getLogger('imdbpy.parser.sql') - - def __init__(self, uri, adultSearch=True, *arguments, **keywords): - """Initialize the access system.""" -@@ -582,7 +581,7 @@ class IMDbSqlAccessSystem(IMDbBase): - except ImportError as e: - raise IMDbError('unable to import SQLAlchemy') - # Set the connection to the database. -- self._sql_logger.debug('connecting to %s', uri) -+ logger.debug('connecting to %s', uri) - try: - self._connection = setConnection(uri, DB_TABLES) - except AssertionError as e: -@@ -593,7 +592,7 @@ class IMDbSqlAccessSystem(IMDbBase): - # Maps some IDs to the corresponding strings. - self._kind = {} - self._kindRev = {} -- self._sql_logger.debug('reading constants from the database') -+ logger.debug('reading constants from the database') - try: - for kt in KindType.select(): - self._kind[kt.id] = kt.kind -@@ -1616,7 +1615,7 @@ class IMDbSqlAccessSystem(IMDbBase): - return - if not hasattr(self, '_connection'): - return -- self._sql_logger.debug('closing connection to the database') -+ logger.debug('closing connection to the database') - try: - self._connection.close() - except: diff --git a/pkgs/development/python-modules/intensity-normalization/default.nix b/pkgs/development/python-modules/intensity-normalization/default.nix index d050bd1c8d1..d884e7ff45c 100644 --- a/pkgs/development/python-modules/intensity-normalization/default.nix +++ b/pkgs/development/python-modules/intensity-normalization/default.nix @@ -15,12 +15,12 @@ buildPythonPackage rec { pname = "intensity-normalization"; - version = "2.0.1"; + version = "2.0.2"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "1c6inlhpxarvkniq8j5j2pgl32dmggn14s8c3c0xx15j7cg90413"; + sha256 = "f963e90671fec51d1b248862a9bcc4639c1d6d3b1dbc1ee34d042cb765d8730a"; }; postPatch = '' diff --git a/pkgs/development/python-modules/iotawattpy/default.nix b/pkgs/development/python-modules/iotawattpy/default.nix new file mode 100644 index 00000000000..7eca486eea0 --- /dev/null +++ b/pkgs/development/python-modules/iotawattpy/default.nix @@ -0,0 +1,36 @@ +{ lib +, buildPythonPackage +, fetchPypi +, httpx +, pythonOlder +}: + +buildPythonPackage rec { + pname = "iotawattpy"; + version = "0.1.0"; + format = "setuptools"; + + disabled = pythonOlder "3.8"; + + src = fetchPypi { + inherit pname version; + sha256 = "1pyxm87lvd6zy0rx7r9jivk2li267r3xr0b9p6vf0v0vp9fmgsw3"; + }; + + propagatedBuildInputs = [ + httpx + ]; + + # Project doesn't tag releases or ship the tests with PyPI + # https://github.com/gtdiehl/iotawattpy/issues/14 + doCheck = false; + + pythonImportsCheck = [ "iotawattpy" ]; + + meta = with lib; { + description = "Python interface for the IoTaWatt device"; + homepage = "https://github.com/gtdiehl/iotawattpy"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/ipyvue/default.nix b/pkgs/development/python-modules/ipyvue/default.nix index 0ccb1b2a4e1..a600c288464 100644 --- a/pkgs/development/python-modules/ipyvue/default.nix +++ b/pkgs/development/python-modules/ipyvue/default.nix @@ -8,13 +8,13 @@ buildPythonPackage rec { pname = "ipyvue"; - version = "1.5.0"; + version = "1.6.0"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "e8549a7ac7dc45948a5f2735e17f97622313c7fea24ea3c1bd4a5ebf02bf5638"; + sha256 = "61c21e698d99ec9dc22a155e8c00d50add99a2976b48cdfeab6bc010d2414f8b"; }; propagatedBuildInputs = [ ipywidgets ]; diff --git a/pkgs/development/python-modules/jc/default.nix b/pkgs/development/python-modules/jc/default.nix index 86f435bc8f3..7a4873a00e0 100644 --- a/pkgs/development/python-modules/jc/default.nix +++ b/pkgs/development/python-modules/jc/default.nix @@ -10,14 +10,14 @@ buildPythonPackage rec { pname = "jc"; - version = "1.16.2"; + version = "1.17.0"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "kellyjonbrazil"; repo = pname; rev = "v${version}"; - sha256 = "sha256-QTisaO0LNjZ+dltHCqyWDQDNCGTqc8woMSwqsoyfhbk="; + sha256 = "sha256-8GTRBoZuA/fsfVxCBpvNefWHuWLvN/L/BT31OFpslxA="; }; propagatedBuildInputs = [ ruamel_yaml xmltodict pygments ]; diff --git a/pkgs/development/python-modules/jsonrpclib-pelix/default.nix b/pkgs/development/python-modules/jsonrpclib-pelix/default.nix index 570fb0a1d1a..0ad388db329 100644 --- a/pkgs/development/python-modules/jsonrpclib-pelix/default.nix +++ b/pkgs/development/python-modules/jsonrpclib-pelix/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "jsonrpclib-pelix"; - version = "0.4.2"; + version = "0.4.3.1"; src = fetchPypi { inherit pname version; - sha256 = "340915c17ebef7451948341542bf4789fc8d8c9fe604e86f00b722b6074a89f0"; + sha256 = "f6f376c72ec1c0dfd69fcc2721d711f6ca1fe22bf71f99e6884c5e43e9b58c95"; }; doCheck = false; # test_suite="tests" in setup.py but no tests in pypi. diff --git a/pkgs/development/python-modules/jupyterlab/default.nix b/pkgs/development/python-modules/jupyterlab/default.nix index 9ab6b3b8423..2562f1738d3 100644 --- a/pkgs/development/python-modules/jupyterlab/default.nix +++ b/pkgs/development/python-modules/jupyterlab/default.nix @@ -10,12 +10,12 @@ buildPythonPackage rec { pname = "jupyterlab"; - version = "3.1.13"; + version = "3.1.14"; disabled = pythonOlder "3.5"; src = fetchPypi { inherit pname version; - sha256 = "48a6214ba8310d8bdb3eb6bac8eedf449c77d1bbb6f81b586267c158ad00b899"; + sha256 = "13174cb6076dd5da6f1b85725ccfcc9518d8f98e86b8b644fc89b1dfaeda63a9"; }; nativeBuildInputs = [ jupyter-packaging ]; diff --git a/pkgs/development/python-modules/karton-classifier/default.nix b/pkgs/development/python-modules/karton-classifier/default.nix index ea9710ecd31..ca2703389b3 100644 --- a/pkgs/development/python-modules/karton-classifier/default.nix +++ b/pkgs/development/python-modules/karton-classifier/default.nix @@ -3,19 +3,22 @@ , chardet , fetchFromGitHub , karton-core -, python +, pytestCheckHook , python_magic +, pythonOlder }: buildPythonPackage rec { pname = "karton-classifier"; - version = "1.1.0"; + version = "1.2.0"; + + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "CERT-Polska"; repo = pname; rev = "v${version}"; - sha256 = "0s09mzsw546klnvm59wzj9vdwd2hyzgxvapi20k86q3prs9ncds6"; + sha256 = "sha256-AG2CtNMgXYfbdlOqB1ZdjMT8H67fsSMXTgiFg6K41IQ="; }; propagatedBuildInputs = [ @@ -30,11 +33,9 @@ buildPythonPackage rec { --replace "python-magic==0.4.18" "python-magic" ''; - checkPhase = '' - runHook preCheck - ${python.interpreter} -m unittest discover - runHook postCheck - ''; + checkInputs = [ + pytestCheckHook + ]; pythonImportsCheck = [ "karton.classifier" ]; diff --git a/pkgs/development/python-modules/lupupy/default.nix b/pkgs/development/python-modules/lupupy/default.nix new file mode 100644 index 00000000000..a1248d33142 --- /dev/null +++ b/pkgs/development/python-modules/lupupy/default.nix @@ -0,0 +1,39 @@ +{ lib +, buildPythonPackage +, colorlog +, demjson +, fetchPypi +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "lupupy"; + version = "0.0.21"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "0cpamb1fp84psiqm7xr156zi4f2fv2wijbjjyk6w87z8fl2aw8xc"; + }; + + propagatedBuildInputs = [ + colorlog + demjson + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "lupupy" ]; + + meta = with lib; { + description = "Python module to control Lupusec alarm control panels"; + homepage = "https://github.com/majuss/lupupy"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/marshmallow-dataclass/default.nix b/pkgs/development/python-modules/marshmallow-dataclass/default.nix new file mode 100644 index 00000000000..145005fd5e3 --- /dev/null +++ b/pkgs/development/python-modules/marshmallow-dataclass/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, marshmallow +, marshmallow-enum +, pytestCheckHook +, pythonOlder +, typeguard +, typing-inspect +}: + +buildPythonPackage rec { + pname = "marshmallow-dataclass"; + version = "8.5.3"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "lovasoa"; + repo = "marshmallow_dataclass"; + rev = "v${version}"; + sha256 = "0mngkjfs2nxxr0y77n429hb22rmjxbnn95j4vwqr9y6q16bqxs0w"; + }; + + propagatedBuildInputs = [ + marshmallow + typing-inspect + ]; + + checkInputs = [ + marshmallow-enum + pytestCheckHook + typeguard + ]; + + pythonImportsCheck = [ "marshmallow_dataclass" ]; + + meta = with lib; { + description = "Automatic generation of marshmallow schemas from dataclasses"; + homepage = "https://github.com/lovasoa/marshmallow_dataclass"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/mediafile/default.nix b/pkgs/development/python-modules/mediafile/default.nix index eb7fc8ca60f..a90b3868eb0 100644 --- a/pkgs/development/python-modules/mediafile/default.nix +++ b/pkgs/development/python-modules/mediafile/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "mediafile"; - version = "0.8.0"; + version = "0.8.1"; src = fetchPypi { inherit pname version; - sha256 = "sha256-19K5DZMstRWu/6+N/McEdM1swedI5qr15kmnIAMA60Y="; + sha256 = "878ccc378b77f2d6c175abea135ea25631f28c722e01e1a051924d962ebea165"; }; propagatedBuildInputs = [ mutagen six ]; diff --git a/pkgs/development/python-modules/mitmproxy/default.nix b/pkgs/development/python-modules/mitmproxy/default.nix index bd6ada6ecd1..4f31c512197 100644 --- a/pkgs/development/python-modules/mitmproxy/default.nix +++ b/pkgs/development/python-modules/mitmproxy/default.nix @@ -45,14 +45,14 @@ buildPythonPackage rec { pname = "mitmproxy"; - version = "7.0.3"; + version = "7.0.4"; disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-j1lipshccPUpMR+o28hDyaJbrVgj6AHijFqOgVmrBkg="; + sha256 = "sha256-424WNG9Yj+Zfo1UTh7emknZ7xTtpFPz7Ph+FpE149FM="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/mypy-boto3-builder/default.nix b/pkgs/development/python-modules/mypy-boto3-builder/default.nix index 0c871c90a3a..e0a67d4f650 100644 --- a/pkgs/development/python-modules/mypy-boto3-builder/default.nix +++ b/pkgs/development/python-modules/mypy-boto3-builder/default.nix @@ -3,10 +3,11 @@ , boto3 , buildPythonPackage , fetchFromGitHub +, isort , jinja2 , md-toc -, isort , mdformat +, poetry-core , pyparsing , pytestCheckHook , pythonOlder @@ -14,16 +15,22 @@ buildPythonPackage rec { pname = "mypy-boto3-builder"; - version = "4.14.1"; - disabled = pythonOlder "3.6"; + version = "5.4.0"; + format = "pyproject"; + + disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "vemel"; repo = "mypy_boto3_builder"; rev = version; - sha256 = "sha256-y55bPi70ldd528Olr2atXHm5JHiLNBZ396D9qwbBmkc="; + sha256 = "sha256-PS2MMpI/ezjHnI6vUoHTt0uuuB/w94OrOYBLNCpSxIE="; }; + nativeBuildInputs = [ + poetry-core + ]; + propagatedBuildInputs = [ black boto3 @@ -38,6 +45,11 @@ buildPythonPackage rec { pytestCheckHook ]; + disabledTests = [ + # Should be fixed with 5.x + "test_get_types" + ]; + pythonImportsCheck = [ "mypy_boto3_builder" ]; meta = with lib; { diff --git a/pkgs/development/python-modules/mypy-boto3-s3/default.nix b/pkgs/development/python-modules/mypy-boto3-s3/default.nix index 8a92882ff36..e7544f44ea6 100644 --- a/pkgs/development/python-modules/mypy-boto3-s3/default.nix +++ b/pkgs/development/python-modules/mypy-boto3-s3/default.nix @@ -8,12 +8,12 @@ buildPythonPackage rec { pname = "mypy-boto3-s3"; - version = "1.18.47"; + version = "1.18.50"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "0687354a1970a157f293ff57f8b38379497b606643633912cc28f76e0333b301"; + sha256 = "338052d36825c3ecb7575de16374b3c60f49129544120f463398545835af9cd0"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/niluclient/default.nix b/pkgs/development/python-modules/niluclient/default.nix new file mode 100644 index 00000000000..7f6aa69da61 --- /dev/null +++ b/pkgs/development/python-modules/niluclient/default.nix @@ -0,0 +1,35 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "niluclient"; + version = "0.1.2"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "11ymn0cr4lchrcnf2xxlgljw223gwln01gxwr7mcgf95yc4006iq"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "niluclient" ]; + + meta = with lib; { + description = "Python client for getting air pollution data from NILU sensor stations"; + homepage = "https://github.com/hfurubotten/niluclient"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/p1monitor/default.nix b/pkgs/development/python-modules/p1monitor/default.nix new file mode 100644 index 00000000000..4a7ce2aec3f --- /dev/null +++ b/pkgs/development/python-modules/p1monitor/default.nix @@ -0,0 +1,45 @@ +{ lib +, aiohttp +, aresponses +, buildPythonPackage +, fetchFromGitHub +, poetry-core +, pythonOlder +, yarl +}: + +buildPythonPackage rec { + pname = "p1monitor"; + version = "1.0.0"; + format = "pyproject"; + + disabled = pythonOlder "3.8"; + + src = fetchFromGitHub { + owner = "klaasnicolaas"; + repo = "python-p1monitor"; + rev = "v${version}"; + sha256 = "1xfr097hmjppp6cfdvfjypxmr1sb9dasq1s3np2vd5d93w0p5123"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + yarl + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "p1monitor" ]; + + meta = with lib; { + description = "Python client for the P1 Monitor"; + homepage = "https://github.com/klaasnicolaas/python-p1monitor"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pglast/default.nix b/pkgs/development/python-modules/pglast/default.nix index 019acbd6567..38acf736b74 100644 --- a/pkgs/development/python-modules/pglast/default.nix +++ b/pkgs/development/python-modules/pglast/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pglast"; - version = "3.4"; + version = "3.5"; src = fetchPypi { inherit pname version; - sha256 = "d2288d9607097a08529d9165970261c1be956934e8a8f6d9ed2a96d9b8f03fc6"; + sha256 = "3bb74df084b149e8bf969380d88b1980fbd1aeda7f7057f4dee6751d854d6ae6"; }; disabled = !isPy3k; diff --git a/pkgs/development/python-modules/phonenumbers/default.nix b/pkgs/development/python-modules/phonenumbers/default.nix index 0b33c2ff56a..2e3a0cb2c7c 100644 --- a/pkgs/development/python-modules/phonenumbers/default.nix +++ b/pkgs/development/python-modules/phonenumbers/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "phonenumbers"; - version = "8.12.32"; + version = "8.12.33"; src = fetchPypi { inherit pname version; - sha256 = "c52c9c3607483072303ba8d8759063edc44d2f8fe7b85afef40bd8d1aafb6483"; + sha256 = "de3d5a3cb421c7421f584bb13cb9287e23ee2dd97d832fc35c9b55b96a576a3c"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/pulp/default.nix b/pkgs/development/python-modules/pulp/default.nix index 2b12c16135d..34cea0a2223 100644 --- a/pkgs/development/python-modules/pulp/default.nix +++ b/pkgs/development/python-modules/pulp/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "PuLP"; - version = "2.5.0"; + version = "2.5.1"; src = fetchPypi { inherit pname version; - sha256 = "5dc7d76bfb1da06ac048066ced75603340d0d7ba8a7dbfce4040d6f126eda0d5"; + sha256 = "27c2a87a98ea0e9a08c7c46e6df47d6d4e753ad9991fea2901892425d89c99a6"; }; propagatedBuildInputs = [ pyparsing amply ]; diff --git a/pkgs/development/python-modules/pyTelegramBotAPI/default.nix b/pkgs/development/python-modules/pyTelegramBotAPI/default.nix index f53038b2e1f..e0ff9369739 100644 --- a/pkgs/development/python-modules/pyTelegramBotAPI/default.nix +++ b/pkgs/development/python-modules/pyTelegramBotAPI/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "pyTelegramBotAPI"; - version = "4.0.0"; + version = "4.1.0"; src = fetchPypi { inherit pname version; - sha256 = "6accc4af505ee5b312689eaee1a9bc93cb6ea31a2d905a877c6b47f0888c3dcc"; + sha256 = "c84218af7e08e859e07cfe5645d9586ceaad51c24f0f4529a9ed0adafd5aa0bf"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/pydoods/default.nix b/pkgs/development/python-modules/pydoods/default.nix new file mode 100644 index 00000000000..ff0872e4237 --- /dev/null +++ b/pkgs/development/python-modules/pydoods/default.nix @@ -0,0 +1,35 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "pydoods"; + version = "1.0.2"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "1brpcfj1iy9mhf2inla4gi681zlh7g4qvhr6vrprk6r693glpn3x"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pydoods" ]; + + meta = with lib; { + description = "Python wrapper for the DOODS service"; + homepage = "https://github.com/snowzach/pydoods"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pyezviz/default.nix b/pkgs/development/python-modules/pyezviz/default.nix index 47337335fb6..fc6c92ae388 100644 --- a/pkgs/development/python-modules/pyezviz/default.nix +++ b/pkgs/development/python-modules/pyezviz/default.nix @@ -11,14 +11,14 @@ buildPythonPackage rec { pname = "pyezviz"; - version = "0.1.9.3"; + version = "0.1.9.4"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "baqs"; repo = "pyEzviz"; rev = version; - sha256 = "sha256-TDFkEz8I0/YoAFhWSYkLqL4+R4yiqAu+QncEieAlh2A="; + sha256 = "sha256-MS4icrTjjcPx3Pb8fpcKAd/JXWqknqp9wb4lQmRwFls="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyflexit/default.nix b/pkgs/development/python-modules/pyflexit/default.nix new file mode 100644 index 00000000000..6f1f582a931 --- /dev/null +++ b/pkgs/development/python-modules/pyflexit/default.nix @@ -0,0 +1,32 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pyflexit"; + version = "0.3"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "Sabesto"; + repo = pname; + rev = version; + sha256 = "1ajlqr3z6zj4fyslqzpwpfkvh8xjx94wsznzij0vx0q7jp43bqig"; + }; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pyflexit" ]; + + meta = with lib; { + description = "Python library for Flexit A/C units"; + homepage = "https://github.com/Sabesto/pyflexit"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pynello/default.nix b/pkgs/development/python-modules/pynello/default.nix new file mode 100644 index 00000000000..43852cbcd4c --- /dev/null +++ b/pkgs/development/python-modules/pynello/default.nix @@ -0,0 +1,41 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, python-dateutil +, pythonOlder +, requests +, requests_oauthlib +}: + +buildPythonPackage rec { + pname = "pynello"; + version = "2.0.3"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "pschmitt"; + repo = pname; + rev = version; + sha256 = "015rlccsn2vff9if82rjj2fza3bjbmawqhamc22wq40gq7pbfk5i"; + }; + + propagatedBuildInputs = [ + python-dateutil + requests + requests_oauthlib + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pynello" ]; + + meta = with lib; { + description = "Python library for nello.io intercoms"; + homepage = "https://github.com/pschmitt/pynello"; + license = with licenses; [ gpl3Only ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pyombi/default.nix b/pkgs/development/python-modules/pyombi/default.nix new file mode 100644 index 00000000000..912c076ae35 --- /dev/null +++ b/pkgs/development/python-modules/pyombi/default.nix @@ -0,0 +1,35 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "pyombi"; + version = "0.1.10"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "1ykbmdc2v05ly9q358j7g73ma9fsqdlclc8i0k1yd0bn7219icpx"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pyombi" ]; + + meta = with lib; { + description = "Python module to retrieve information from Ombi"; + homepage = "https://github.com/larssont/pyombi"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pypoolstation/default.nix b/pkgs/development/python-modules/pypoolstation/default.nix new file mode 100644 index 00000000000..b49599cfda1 --- /dev/null +++ b/pkgs/development/python-modules/pypoolstation/default.nix @@ -0,0 +1,41 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchPypi +, poetry-core +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pypoolstation"; + version = "0.4.0"; + format = "pyproject"; + + disabled = pythonOlder "3.7"; + + src = fetchPypi { + pname = "PyPoolstation"; + inherit version; + sha256 = "0qacrjv3qybgx052i8jqs4il3k2g0cdhjcn2lqapv87iqyp287k0"; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pypoolstation" ]; + + meta = with lib; { + description = "Python library to interact the the Poolstation platform"; + homepage = "https://github.com/cibernox/PyPoolstation"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pyproj/001.proj.patch b/pkgs/development/python-modules/pyproj/001.proj.patch index 7b1680e980e..f62b70915dc 100644 --- a/pkgs/development/python-modules/pyproj/001.proj.patch +++ b/pkgs/development/python-modules/pyproj/001.proj.patch @@ -1,19 +1,21 @@ -diff -Nur a/pyproj/datadir.py b/pyproj/datadir.py ---- a/pyproj/datadir.py 2021-04-10 18:26:52.829018483 +0100 -+++ b/pyproj/datadir.py 2021-04-10 18:44:59.155190614 +0100 -@@ -70,7 +70,7 @@ +diff --git a/pyproj/datadir.py b/pyproj/datadir.py +index 9ca1d25..4198490 100644 +--- a/pyproj/datadir.py ++++ b/pyproj/datadir.py +@@ -70,7 +70,7 @@ def get_data_dir() -> str: + global _VALIDATED_PROJ_DATA if _VALIDATED_PROJ_DATA is not None: return _VALIDATED_PROJ_DATA - global _USER_PROJ_DATA - internal_datadir = Path(__file__).absolute().parent / "proj_dir" / "share" / "proj" + internal_datadir = Path("@proj@/share/proj") proj_lib_dirs = os.environ.get("PROJ_LIB", "") prefix_datadir = Path(sys.prefix, "share", "proj") -diff -Nur a/setup.py b/setup.py ---- a/setup.py 2021-04-10 18:26:52.817018512 +0100 -+++ b/setup.py 2021-04-10 18:46:01.652324424 +0100 -@@ -11,7 +11,7 @@ +diff --git a/setup.py b/setup.py +index 6bb0c6c..b3d0321 100644 +--- a/setup.py ++++ b/setup.py +@@ -12,7 +12,7 @@ from setuptools import Extension, setup PROJ_MIN_VERSION = parse_version("7.2.0") CURRENT_FILE_PATH = Path(__file__).absolute().parent BASE_INTERNAL_PROJ_DIR = Path("proj_dir") @@ -22,7 +24,7 @@ diff -Nur a/setup.py b/setup.py def get_proj_version(proj_dir: Path) -> str: -@@ -150,7 +150,7 @@ +@@ -155,7 +155,7 @@ def get_extension_modules(): # By default we'll try to get options PROJ_DIR or the local version of proj proj_dir = get_proj_dir() library_dirs = get_proj_libdirs(proj_dir) @@ -31,21 +33,11 @@ diff -Nur a/setup.py b/setup.py proj_version = get_proj_version(proj_dir) check_proj_version(proj_version) -diff -Nur a/test/conftest.py b/test/conftest.py ---- a/test/conftest.py 2021-04-10 18:26:52.831018478 +0100 -+++ b/test/conftest.py 2021-04-10 18:37:01.605682432 +0100 -@@ -2,6 +2,7 @@ - from contextlib import contextmanager - from distutils.version import LooseVersion - from pathlib import Path -+import stat - - import pyproj - from pyproj.datadir import get_data_dir, get_user_data_dir, set_data_dir -diff -Nur a/test/test_cli.py b/test/test_cli.py ---- a/test/test_cli.py 2021-04-10 18:26:52.831018478 +0100 -+++ b/test/test_cli.py 2021-04-10 22:17:04.665088162 +0100 -@@ -14,7 +14,7 @@ +diff --git a/test/test_cli.py b/test/test_cli.py +index 7a696de..1b9b777 100644 +--- a/test/test_cli.py ++++ b/test/test_cli.py +@@ -14,7 +14,7 @@ from pyproj.sync import _load_grid_geojson from test.conftest import grids_available, proj_env, tmp_chdir PYPROJ_CLI_ENDPONTS = pytest.mark.parametrize( diff --git a/pkgs/development/python-modules/pyproj/default.nix b/pkgs/development/python-modules/pyproj/default.nix index 98e3e802c6e..9632fc5cb40 100644 --- a/pkgs/development/python-modules/pyproj/default.nix +++ b/pkgs/development/python-modules/pyproj/default.nix @@ -17,14 +17,14 @@ buildPythonPackage rec { pname = "pyproj"; - version = "3.1.0"; + version = "3.2.1"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "pyproj4"; repo = "pyproj"; rev = version; - sha256 = "sha256-UN8cJk5Lgd+d2tKmFuF6QvKr36w1435RKovzGfMXi1E="; + sha256 = "sha256-r343TvXpSr+EMAbvzSUpsfipwP8TFmitOfT0gjgoO00="; }; # force pyproj to use ${proj} diff --git a/pkgs/development/python-modules/pyroute2-core/default.nix b/pkgs/development/python-modules/pyroute2-core/default.nix index b6143713471..fe92d88beae 100644 --- a/pkgs/development/python-modules/pyroute2-core/default.nix +++ b/pkgs/development/python-modules/pyroute2-core/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-core"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.core"; inherit version; - sha256 = "1kd5wda7nqcmrwy6b42nqgz570y99yjw3m6a1kxr8ag3859fwga5"; + sha256 = "sha256-Jm10Dq5A+mTdBFQfAH0022ls7PMVTLpb4w+nWmfUOFI="; }; # pyroute2 sub-modules have no tests diff --git a/pkgs/development/python-modules/pyroute2-ethtool/default.nix b/pkgs/development/python-modules/pyroute2-ethtool/default.nix index 812b71ef756..6f269550786 100644 --- a/pkgs/development/python-modules/pyroute2-ethtool/default.nix +++ b/pkgs/development/python-modules/pyroute2-ethtool/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ethtool"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.ethtool"; inherit version; - sha256 = "04wxx2nn3rdsjcmck7fidzfdc42gpsjva2jc8p7a987b0j58r17s"; + sha256 = "sha256-yvgBS2dlIRNcR2DXLPWu72q7x/onUhD36VMzBzzHcVo="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-ipdb/default.nix b/pkgs/development/python-modules/pyroute2-ipdb/default.nix index 0e9c457698b..7411f49cb52 100644 --- a/pkgs/development/python-modules/pyroute2-ipdb/default.nix +++ b/pkgs/development/python-modules/pyroute2-ipdb/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ipdb"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.ipdb"; inherit version; - sha256 = "0r4xq7h39qac309lpl7haaa4rqf6qzsypkgnsiran3w9jgr1hg75"; + sha256 = "sha256-8gKP0QE9iviIFQ0DPuz3U3ZXpL434MzOqYAICZYetXc="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-ipset/default.nix b/pkgs/development/python-modules/pyroute2-ipset/default.nix index 34a99898e74..5ab21f8f22c 100644 --- a/pkgs/development/python-modules/pyroute2-ipset/default.nix +++ b/pkgs/development/python-modules/pyroute2-ipset/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ipset"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.ipset"; inherit version; - sha256 = "sha256-V6aUGYv4PGhxHoEjgNuqoRbd6ftqirO/ofNDQEACTy8="; + sha256 = "sha256-rlJ8D5mXSCMKH2iNmit8JXst9tdDafROylMNAHeTt50="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-ndb/default.nix b/pkgs/development/python-modules/pyroute2-ndb/default.nix index 4dcb6544074..7caa902dfa7 100644 --- a/pkgs/development/python-modules/pyroute2-ndb/default.nix +++ b/pkgs/development/python-modules/pyroute2-ndb/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-ndb"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.ndb"; inherit version; - sha256 = "0q3py2n6w7nhdxi4l6vx8xpxh5if6hav4lcl5nwk8c4pgcrfd4vn"; + sha256 = "sha256-pNMJWE6e9seEKvT4MrSPxTRKsiXnDjhLrtG3/iuU2fg="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-nftables/default.nix b/pkgs/development/python-modules/pyroute2-nftables/default.nix index 9554dd8cbe3..ec5ada77dd2 100644 --- a/pkgs/development/python-modules/pyroute2-nftables/default.nix +++ b/pkgs/development/python-modules/pyroute2-nftables/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-nftables"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.nftables"; inherit version; - sha256 = "0mj897h86ifk4ncms71nz6qrrfzfq8hd81198vf1hm41wppgyxn1"; + sha256 = "sha256-sUVaY6PvwFDRCNVQ0cr9AR7d7W6JTZnnvfoC1ZK/bxY="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-nslink/default.nix b/pkgs/development/python-modules/pyroute2-nslink/default.nix index e5b6fae9024..722ea0a12f9 100644 --- a/pkgs/development/python-modules/pyroute2-nslink/default.nix +++ b/pkgs/development/python-modules/pyroute2-nslink/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-nslink"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.nslink"; inherit version; - sha256 = "0iz4vrv05x678ihhl2wdppxda82fxrq3d3sh7mka0pyb66a8mrik"; + sha256 = "sha256-KS5sKDKnNUTBxtW6cn9xF6qEflX4jXjpS31GB7KZmZ4="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2-protocols/default.nix b/pkgs/development/python-modules/pyroute2-protocols/default.nix index bce291494a2..ec3226f0cd9 100644 --- a/pkgs/development/python-modules/pyroute2-protocols/default.nix +++ b/pkgs/development/python-modules/pyroute2-protocols/default.nix @@ -6,12 +6,12 @@ buildPythonPackage rec { pname = "pyroute2-protocols"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { pname = "pyroute2.protocols"; inherit version; - sha256 = "0gb5r1msd14fhalfknhmg67l2hm802r4771i1srgl4rix1sk0yw8"; + sha256 = "sha256-lj9Q8ew+44m+Y72miQyuZhzjHmdLqYB+c2FK+ph1d84="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pyroute2/default.nix b/pkgs/development/python-modules/pyroute2/default.nix index b4e035e89cc..9afea342e6d 100644 --- a/pkgs/development/python-modules/pyroute2/default.nix +++ b/pkgs/development/python-modules/pyroute2/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "pyroute2"; - version = "0.6.4"; + version = "0.6.5"; src = fetchPypi { inherit pname version; - sha256 = "560b48a751b1150056ba553c89a31d563cc18ae2675b3793666adcaeb4fabfda"; + sha256 = "sha256-0JlciuuWwOTu1NYul8nXlQAKGjO3R9bcVDJmZYV88Rw="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pysdcp/default.nix b/pkgs/development/python-modules/pysdcp/default.nix new file mode 100644 index 00000000000..b6b1798f7ae --- /dev/null +++ b/pkgs/development/python-modules/pysdcp/default.nix @@ -0,0 +1,31 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonOlder +}: + +buildPythonPackage rec { + pname = "pysdcp"; + version = "1"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchPypi { + pname = "pySDCP"; + inherit version; + sha256 = "07396lsn610izaravqc6j5f6m0wjrzgc0d1r9dwqzj15g5zfc7wm"; + }; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "pysdcp" ]; + + meta = with lib; { + description = "Python library to control SONY projectors"; + homepage = "https://github.com/Galala7/pySDCP"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pysiaalarm/default.nix b/pkgs/development/python-modules/pysiaalarm/default.nix index 206d24a40dc..6d59006fab4 100644 --- a/pkgs/development/python-modules/pysiaalarm/default.nix +++ b/pkgs/development/python-modules/pysiaalarm/default.nix @@ -12,13 +12,13 @@ buildPythonPackage rec { pname = "pysiaalarm"; - version = "3.0.0"; + version = "3.0.1"; disabled = pythonOlder "3.8"; src = fetchPypi { inherit pname version; - sha256 = "b1c3a3d48d399bc91014167f59b23af601044d182db9267c23a9cf3559922122"; + sha256 = "sha256-96LSD1jL4Za7HF9vgplImeY57EQ9qa/hOdjQ/PPBq4A="; }; postPatch = '' diff --git a/pkgs/development/python-modules/pyspcwebgw/default.nix b/pkgs/development/python-modules/pyspcwebgw/default.nix new file mode 100644 index 00000000000..8c901f17747 --- /dev/null +++ b/pkgs/development/python-modules/pyspcwebgw/default.nix @@ -0,0 +1,46 @@ +{ lib +, aiohttp +, aioresponses +, asynccmd +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytestCheckHook +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "pyspcwebgw"; + version = "0.5.0"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "mbrrg"; + repo = pname; + rev = "v${version}"; + sha256 = "0pc25myjc2adqcx2lbns9kw0gy17x1qjgicmfj46n6fn0c786p9v"; + }; + + propagatedBuildInputs = [ + asynccmd + aiohttp + ]; + + checkInputs = [ + aioresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "pyspcwebgw" ]; + + meta = with lib; { + description = "Python module for the SPC Web Gateway REST API"; + homepage = "https://github.com/mbrrg/pyspcwebgw"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/pytest-console-scripts/default.nix b/pkgs/development/python-modules/pytest-console-scripts/default.nix index aaecd191e93..3005c26f77b 100644 --- a/pkgs/development/python-modules/pytest-console-scripts/default.nix +++ b/pkgs/development/python-modules/pytest-console-scripts/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "pytest-console-scripts"; - version = "1.2.0"; + version = "1.2.1"; src = fetchPypi { inherit pname version; - sha256 = "4a2138d7d567bc581fe081b6a5975849a2a36b3925cb0f066d2380103e13741c"; + sha256 = "c7f258025110f1337c23499c2f6674b873d4adba2438be55895edf01451c5ce3"; }; postPatch = '' # setuptools-scm is pinned to <6 because it dropped Python 3.5 diff --git a/pkgs/development/python-modules/python-engineio/default.nix b/pkgs/development/python-modules/python-engineio/default.nix index 1b35f64bd7c..7f51ccac6a7 100644 --- a/pkgs/development/python-modules/python-engineio/default.nix +++ b/pkgs/development/python-modules/python-engineio/default.nix @@ -16,13 +16,13 @@ buildPythonPackage rec { pname = "python-engineio"; - version = "4.2.0"; + version = "4.2.1"; src = fetchFromGitHub { owner = "miguelgrinberg"; repo = "python-engineio"; rev = "v${version}"; - sha256 = "sha256-QfX8Volz5nabGVhQLXfSD/QooxLsU6DvCq1WRkRZ6hU="; + sha256 = "sha256-aAoTeQZCtxddVBPwlyv2j4aACMO9p0vQ/ESkkv4E3VE="; }; checkInputs = [ diff --git a/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix b/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix new file mode 100644 index 00000000000..6bb111a07e9 --- /dev/null +++ b/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix @@ -0,0 +1,41 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pyhamcrest +, pytestCheckHook +, requests +, requests-mock +, six +}: + +buildPythonPackage rec { + pname = "python-owasp-zap-v2-4"; + version = "0.0.18"; + + src = fetchFromGitHub { + owner = "zaproxy"; + repo = "zap-api-python"; + rev = version; + sha256 = "0b46m9s0vwaaq8vhiqspdr2ns9qdw65fnjh8mf58gjinlsd27ygk"; + }; + + propagatedBuildInputs = [ + requests + six + ]; + + checkInputs = [ + pyhamcrest + pytestCheckHook + requests-mock + ]; + + pythonImportsCheck = [ "zapv2" ]; + + meta = with lib; { + description = "Python library to access the OWASP ZAP API"; + homepage = "https://github.com/zaproxy/zap-api-python"; + license = licenses.asl20; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/python-socketio/default.nix b/pkgs/development/python-modules/python-socketio/default.nix index 2b5c9c84a84..5a672b2dec6 100644 --- a/pkgs/development/python-modules/python-socketio/default.nix +++ b/pkgs/development/python-modules/python-socketio/default.nix @@ -3,19 +3,20 @@ , buildPythonPackage , fetchFromGitHub , mock +, msgpack , pytestCheckHook , python-engineio }: buildPythonPackage rec { pname = "python-socketio"; - version = "5.3.0"; + version = "5.4.0"; src = fetchFromGitHub { owner = "miguelgrinberg"; repo = "python-socketio"; rev = "v${version}"; - sha256 = "sha256-jyTTWxShLDDnbT+MYIJIjwpn3xfIB04je78doIOG+FQ="; + sha256 = "sha256-0Q1R8XPciU5AEkj7Exlc906eyA5juYKzzA/Ygnzx7XU="; }; propagatedBuildInputs = [ @@ -25,6 +26,7 @@ buildPythonPackage rec { checkInputs = [ mock + msgpack pytestCheckHook ]; diff --git a/pkgs/development/python-modules/python-swiftclient/default.nix b/pkgs/development/python-modules/python-swiftclient/default.nix index aebc5d75988..adb675c0db5 100644 --- a/pkgs/development/python-modules/python-swiftclient/default.nix +++ b/pkgs/development/python-modules/python-swiftclient/default.nix @@ -25,6 +25,10 @@ buildPythonApplication rec { stestr ]; + postInstall = '' + install -Dm644 tools/swift.bash_completion $out/share/bash_completion.d/swift + ''; + checkPhase = '' stestr run ''; diff --git a/pkgs/development/python-modules/python3-application/default.nix b/pkgs/development/python-modules/python3-application/default.nix index cddb354a5db..51794d096d1 100644 --- a/pkgs/development/python-modules/python3-application/default.nix +++ b/pkgs/development/python-modules/python3-application/default.nix @@ -17,7 +17,7 @@ buildPythonPackage rec { # Apply bugfix commit that is not yet part of a release (fetchpatch { name = "fix-time-import.patch"; - url = "https://github.com/AGProjects/${pname}/commit/695f7d769e69c84e065872ffb403157d0af282fd.patch"; + url = "https://github.com/AGProjects/python3-application/commit/695f7d769e69c84e065872ffb403157d0af282fd.patch"; sha256 = "sha256-MGs8uUIFXkPXStOn5oCNNEMVmcKrq8YPl8Xvl3OTOUM="; }) ]; diff --git a/pkgs/development/python-modules/pytibber/default.nix b/pkgs/development/python-modules/pytibber/default.nix index 8320257ac12..1ca78b51e98 100644 --- a/pkgs/development/python-modules/pytibber/default.nix +++ b/pkgs/development/python-modules/pytibber/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "pytibber"; - version = "0.19.1"; + version = "0.20.0"; disabled = pythonOlder "3.7"; @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "Danielhiversen"; repo = "pyTibber"; rev = version; - sha256 = "sha256-+CI2TIGUZTztwx/9JqleKfVksybwGUGiHktu2xcNyUg="; + sha256 = "sha256-q7DNRCJrt4B/u7QV4MocxmlfEdLmJMP7umv3+PJjIoE="; }; propagatedBuildInputs = [ @@ -43,7 +43,7 @@ buildPythonPackage rec { pythonImportsCheck = [ "tibber" ]; meta = with lib; { - description = "A python3 library to communicate with Tibber"; + description = "Python library to communicate with Tibber"; homepage = "https://github.com/Danielhiversen/pyTibber"; license = licenses.mit; maintainers = with maintainers; [ dotlambda ]; diff --git a/pkgs/development/python-modules/pyupgrade/default.nix b/pkgs/development/python-modules/pyupgrade/default.nix index 3eca1bbaa1b..8e355699258 100644 --- a/pkgs/development/python-modules/pyupgrade/default.nix +++ b/pkgs/development/python-modules/pyupgrade/default.nix @@ -8,14 +8,14 @@ buildPythonPackage rec { pname = "pyupgrade"; - version = "2.26.0"; + version = "2.29.0"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "asottile"; repo = pname; rev = "v${version}"; - sha256 = "sha256-fXDBozMZbvMkdqafvPQrCI26OjQ/2Rx6OMQs9X2Q55s="; + sha256 = "sha256-Hq58DJe8ZLZSJdhqSxfTaZPnWae2aQFCe7lH+6Y6ABg="; }; checkInputs = [ pytestCheckHook ]; diff --git a/pkgs/development/python-modules/pyvex/default.nix b/pkgs/development/python-modules/pyvex/default.nix index 786eb560662..6a4215236d8 100644 --- a/pkgs/development/python-modules/pyvex/default.nix +++ b/pkgs/development/python-modules/pyvex/default.nix @@ -11,11 +11,11 @@ buildPythonPackage rec { pname = "pyvex"; - version = "9.0.10010"; + version = "9.0.10055"; src = fetchPypi { inherit pname version; - sha256 = "sha256-1vAiDXMYiclK5P8QZUBuy6KllcAQm8d7rQpN+CBDVVA="; + sha256 = "sha256-ZfsFr8EkzdDYMyE/OJVwQylHVKcOrW1NBMI8cGmyF9A="; }; postPatch = lib.optionalString stdenv.isDarwin '' diff --git a/pkgs/development/python-modules/pyvolumio/default.nix b/pkgs/development/python-modules/pyvolumio/default.nix index da3ac35c462..f4164b884c7 100644 --- a/pkgs/development/python-modules/pyvolumio/default.nix +++ b/pkgs/development/python-modules/pyvolumio/default.nix @@ -7,20 +7,22 @@ buildPythonPackage rec { pname = "pyvolumio"; - version = "0.1.3"; + version = "0.1.4"; + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "OnFreund"; repo = "PyVolumio"; rev = "v${version}"; - sha256 = "0x2dzmd9lwnak2iy6v54y24qjq37y3nlfhsvx7hddgv8jj1klvap"; + sha256 = "0c6kcz9x0n9w67h2gncyhq0dw3q17nmzipcgx59pwqnn33jan5nf"; }; propagatedBuildInputs = [ aiohttp ]; # Project has no tests doCheck = false; + pythonImportsCheck = [ "pyvolumio" ]; meta = with lib; { diff --git a/pkgs/development/python-modules/qcelemental/default.nix b/pkgs/development/python-modules/qcelemental/default.nix index 57b50f820f7..c0992e98251 100644 --- a/pkgs/development/python-modules/qcelemental/default.nix +++ b/pkgs/development/python-modules/qcelemental/default.nix @@ -4,14 +4,14 @@ buildPythonPackage rec { pname = "qcelemental"; - version = "0.22.0"; + version = "0.23.0"; checkInputs = [ pytest-runner pytest-cov pytest ]; propagatedBuildInputs = [ numpy pydantic pint networkx ]; src = fetchPypi { inherit pname version; - sha256 = "1d7fc613fbe30189cfa970a863a5955865b1116ff651d20325c721b6f0ef1f52"; + sha256 = "642bc86ce937621ddfb1291cbff0851be16b26feb5eec562296999e36181cee3"; }; doCheck = true; diff --git a/pkgs/development/python-modules/renault-api/default.nix b/pkgs/development/python-modules/renault-api/default.nix new file mode 100644 index 00000000000..cf7bed958ed --- /dev/null +++ b/pkgs/development/python-modules/renault-api/default.nix @@ -0,0 +1,58 @@ +{ lib +, aiohttp +, aioresponses +, buildPythonPackage +, click +, dateparser +, fetchFromGitHub +, marshmallow-dataclass +, poetry-core +, pyjwt +, pythonOlder +, pytest-asyncio +, pytestCheckHook +, tabulate +}: + +buildPythonPackage rec { + pname = "renault-api"; + version = "0.1.5"; + format = "pyproject"; + + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "hacf-fr"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-b3oHpERUqeIw0yOxZytQuRE4jVUcahWlMQ+7ZBX0KL8="; + }; + + nativeBuildInputs = [ + poetry-core + ]; + + propagatedBuildInputs = [ + aiohttp + click + dateparser + marshmallow-dataclass + pyjwt + tabulate + ]; + + checkInputs = [ + aioresponses + pytest-asyncio + pytestCheckHook + ]; + + pythonImportsCheck = [ "renault_api" ]; + + meta = with lib; { + description = "Python library to interact with the Renault API"; + homepage = "https://github.com/hacf-fr/renault-api"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/scikit-fmm/default.nix b/pkgs/development/python-modules/scikit-fmm/default.nix index 742c404a845..ab51a47d19b 100644 --- a/pkgs/development/python-modules/scikit-fmm/default.nix +++ b/pkgs/development/python-modules/scikit-fmm/default.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "scikit-fmm"; - version = "2021.7.8"; + version = "2021.9.23"; src = fetchPypi { inherit pname version; - sha256 = "f931a2600e7f0824ac51ebde86ee40295146cc1ad5f88fdc208b0a12fcb2ddb3"; + sha256 = "94808e6d747143cc9d50aa946cf5b1e61dbd4d8bc6229a7a5f57db6cedf38a47"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/scikit-hep-testdata/default.nix b/pkgs/development/python-modules/scikit-hep-testdata/default.nix index d4e31966da2..8f02f67c1b5 100644 --- a/pkgs/development/python-modules/scikit-hep-testdata/default.nix +++ b/pkgs/development/python-modules/scikit-hep-testdata/default.nix @@ -11,7 +11,7 @@ buildPythonPackage rec { pname = "scikit-hep-testdata"; - version = "0.4.8"; + version = "0.4.9"; format = "pyproject"; # fetch from github as we want the data files @@ -20,7 +20,7 @@ buildPythonPackage rec { owner = "scikit-hep"; repo = pname; rev = "v${version}"; - sha256 = "0x5p42c9iqwdx15gdvccddlx4a5a8aix7h01345afrlgpnnpqcv4"; + sha256 = "0y70nx94y2qf0zmaqjq4ljld31jh277ica0j4c3ck2ph7jrs5pg0"; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/screenlogicpy/default.nix b/pkgs/development/python-modules/screenlogicpy/default.nix index c8e7a81df1f..1032f6256bb 100644 --- a/pkgs/development/python-modules/screenlogicpy/default.nix +++ b/pkgs/development/python-modules/screenlogicpy/default.nix @@ -7,14 +7,14 @@ buildPythonPackage rec { pname = "screenlogicpy"; - version = "0.4.2"; + version = "0.4.3"; disabled = pythonOlder "3.6"; src = fetchFromGitHub { owner = "dieselrabbit"; repo = pname; rev = "v${version}"; - sha256 = "158y34d140bh93l143plq53l7n7mcnmqi5mj7hj0j1ljccxpjcnj"; + sha256 = "0v0nbwz0w2m7kzvcl0fh2v2rk5ldsq22siyxq6d401pkpzwih25c"; }; checkInputs = [ diff --git a/pkgs/development/python-modules/sense-energy/default.nix b/pkgs/development/python-modules/sense-energy/default.nix index a3cd63d485e..d3b027924c5 100644 --- a/pkgs/development/python-modules/sense-energy/default.nix +++ b/pkgs/development/python-modules/sense-energy/default.nix @@ -9,13 +9,13 @@ buildPythonPackage rec { pname = "sense-energy"; - version = "0.9.0"; + version = "0.9.2"; src = fetchFromGitHub { owner = "scottbonline"; repo = "sense"; rev = version; - sha256 = "1lbarsa9wpm7hnhgf2g253w0gs80cn989dnj4aqmic57x5isikhz"; + sha256 = "sha256-XZvx/GWpz49dsiY9pgMfX+6gUfWA8q6IpnzmCRPFHus="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/sentry-sdk/default.nix b/pkgs/development/python-modules/sentry-sdk/default.nix index 2f8930cd676..d7678941597 100644 --- a/pkgs/development/python-modules/sentry-sdk/default.nix +++ b/pkgs/development/python-modules/sentry-sdk/default.nix @@ -29,11 +29,11 @@ buildPythonPackage rec { pname = "sentry-sdk"; - version = "1.4.1"; + version = "1.4.3"; src = fetchPypi { inherit pname version; - sha256 = "4297555ddc37c7136740e6b547b7d68f5bca0b4832f94ac097e5d531a4c77528"; + sha256 = "b9844751e40710e84a457c5bc29b21c383ccb2b63d76eeaad72f7f1c808c8828"; }; checkInputs = [ blinker botocore chalice django flask tornado bottle rq falcon sqlalchemy werkzeug trytond diff --git a/pkgs/development/python-modules/streamlabswater/default.nix b/pkgs/development/python-modules/streamlabswater/default.nix new file mode 100644 index 00000000000..fc90ea222c7 --- /dev/null +++ b/pkgs/development/python-modules/streamlabswater/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +, requests +}: + +buildPythonPackage rec { + pname = "streamlabswater"; + version = "0.3.2"; + format = "setuptools"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = pname; + repo = "stream-python"; + rev = "v${version}"; + sha256 = "1lh1i1ksic9yhxnwc7mqm5qla98x85dfwj846kwldwam0vcrqlk7"; + }; + + propagatedBuildInputs = [ + requests + ]; + + # Project has no tests + doCheck = false; + + pythonImportsCheck = [ "streamlabswater" ]; + + meta = with lib; { + description = "Python library for the StreamLabs API"; + homepage = "https://github.com/streamlabswater/stream-python"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/tensorflow/bin.nix b/pkgs/development/python-modules/tensorflow/bin.nix index f5960f0e29e..8d8690d3e5c 100644 --- a/pkgs/development/python-modules/tensorflow/bin.nix +++ b/pkgs/development/python-modules/tensorflow/bin.nix @@ -23,7 +23,6 @@ , cudaSupport ? false , cudatoolkit ? null , cudnn ? null -, nvidia_x11 ? null , zlib , python , symlinkJoin @@ -41,8 +40,7 @@ # - the source build is currently brittle and not easy to maintain assert cudaSupport -> cudatoolkit != null - && cudnn != null - && nvidia_x11 != null; + && cudnn != null; # unsupported combination assert ! (stdenv.isDarwin && cudaSupport); @@ -126,7 +124,6 @@ in buildPythonPackage { cudatoolkit.out cudatoolkit.lib cudnn - nvidia_x11 ]; libpaths = [ diff --git a/pkgs/development/python-modules/thrift/default.nix b/pkgs/development/python-modules/thrift/default.nix index 7b16d666870..5e80ac14e5a 100644 --- a/pkgs/development/python-modules/thrift/default.nix +++ b/pkgs/development/python-modules/thrift/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "thrift"; - version = "0.13.0"; + version = "0.15.0"; src = fetchPypi { inherit pname version; - sha256 = "9af1c86bf73433afc6010ed376a6c6aca2b54099cc0d61895f640870a9ae7d89"; + sha256 = "87c8205a71cf8bbb111cb99b1f7495070fbc9cabb671669568854210da5b3e29"; }; propagatedBuildInputs = [ six ]; @@ -18,11 +18,12 @@ buildPythonPackage rec { # No tests. Breaks when not disabling. doCheck = false; + pythonImportsCheck = [ "thrift" ]; + meta = with lib; { description = "Python bindings for the Apache Thrift RPC system"; - homepage = "http://thrift.apache.org/"; + homepage = "https://thrift.apache.org/"; license = licenses.asl20; maintainers = with maintainers; [ hbunke ]; }; - } diff --git a/pkgs/development/python-modules/translatepy/default.nix b/pkgs/development/python-modules/translatepy/default.nix index 8428f0b06e4..b472042dd65 100644 --- a/pkgs/development/python-modules/translatepy/default.nix +++ b/pkgs/development/python-modules/translatepy/default.nix @@ -10,13 +10,13 @@ buildPythonPackage rec { pname = "translatepy"; - version = "2.0"; + version = "2.1"; src = fetchFromGitHub { owner = "Animenosekai"; repo = "translate"; rev = "v${version}"; - sha256 = "Rt6FvB4kZVaB/jxxqOHsnkReTFCCyiEaZf240n0zVZs="; + sha256 = "0xj97s6zglvq2894wpq3xbjxgfkrfk2414vmcszap8h9j2zxz8gf"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/types-requests/default.nix b/pkgs/development/python-modules/types-requests/default.nix index 798dbd6c42d..464b0d58762 100644 --- a/pkgs/development/python-modules/types-requests/default.nix +++ b/pkgs/development/python-modules/types-requests/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "types-requests"; - version = "2.25.8"; + version = "2.25.9"; src = fetchPypi { inherit pname version; - sha256 = "sha256-IlrC6GVJtu86ikS/lV+AtJVYVXBKFdKIPYRFyN9jckI="; + sha256 = "sha256-Tsi3Hac+U0Stub7nJadOyFmOcob5vLF1ANYn8ln+T7k="; }; # Modules doesn't have tests diff --git a/pkgs/development/python-modules/velbus-aio/default.nix b/pkgs/development/python-modules/velbus-aio/default.nix index d4ddd6fa3cc..b9d6b715166 100644 --- a/pkgs/development/python-modules/velbus-aio/default.nix +++ b/pkgs/development/python-modules/velbus-aio/default.nix @@ -8,7 +8,7 @@ buildPythonPackage rec { pname = "velbus-aio"; - version = "2021.9.2"; + version = "2021.9.4"; disabled = pythonOlder "3.7"; @@ -16,7 +16,7 @@ buildPythonPackage rec { owner = "Cereal2nd"; repo = pname; rev = version; - sha256 = "sha256-pFVhWrMygCwAsAYPnqtoaPcgh6y0Tf9vROYfn0M+g2E="; + sha256 = "sha256-WywJ70tVniUX9RZTh9aswHgCEvWTggzABhSWoSRydUc="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/voluptuous/default.nix b/pkgs/development/python-modules/voluptuous/default.nix index 9882724fbb6..cc9d772eda1 100644 --- a/pkgs/development/python-modules/voluptuous/default.nix +++ b/pkgs/development/python-modules/voluptuous/default.nix @@ -1,22 +1,32 @@ -{ lib, buildPythonPackage, fetchPypi, nose }: +{ lib +, buildPythonPackage +, fetchPypi +, nose +}: buildPythonPackage rec { pname = "voluptuous"; - version = "0.12.1"; + version = "0.12.2"; src = fetchPypi { inherit pname version; - sha256 = "0js4avmhmmys78z376xk1w9305hq5nad8zqrnksgmpc1j90p4db6"; + sha256 = "sha256-TbGsUHnbkkmCDUnIkctGYKb4yuNQSRIQq850H6v1ZRM="; }; - checkInputs = [ nose ]; + checkInputs = [ + nose + ]; + checkPhase = '' nosetests ''; + pythonImportsCheck = [ "voluptuous" ]; + meta = with lib; { - description = "Voluptuous is a Python data validation library"; + description = "Python data validation library"; homepage = "http://alecthomas.github.io/voluptuous/"; license = licenses.bsd3; + maintainers = with maintainers; [ fab ]; }; } diff --git a/pkgs/development/python-modules/vt-py/default.nix b/pkgs/development/python-modules/vt-py/default.nix new file mode 100644 index 00000000000..e208e3a7682 --- /dev/null +++ b/pkgs/development/python-modules/vt-py/default.nix @@ -0,0 +1,47 @@ +{ lib +, aiohttp +, buildPythonPackage +, fetchFromGitHub +, pytest-asyncio +, pytest-httpserver +, pytestCheckHook +, pythonOlder +}: + +buildPythonPackage rec { + pname = "vt-py"; + version = "0.7.4"; + + disabled = pythonOlder "3.6"; + + src = fetchFromGitHub { + owner = "VirusTotal"; + repo = pname; + rev = version; + sha256 = "149fgrqnwf8nyv3msj6p614zbdi7m7s785y3fvh8fm8k7lmgqk8w"; + }; + + propagatedBuildInputs = [ + aiohttp + ]; + + checkInputs = [ + pytest-asyncio + pytest-httpserver + pytestCheckHook + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace "'pytest-runner'" "" + ''; + + pythonImportsCheck = [ "vt" ]; + + meta = with lib; { + description = "Python client library for VirusTotal"; + homepage = "https://virustotal.github.io/vt-py/"; + license = with licenses; [ asl20 ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/development/python-modules/xml2rfc/default.nix b/pkgs/development/python-modules/xml2rfc/default.nix index b623fc37c22..de17aa84922 100644 --- a/pkgs/development/python-modules/xml2rfc/default.nix +++ b/pkgs/development/python-modules/xml2rfc/default.nix @@ -1,15 +1,34 @@ -{ lib, fetchPypi, buildPythonPackage, pythonAtLeast, intervaltree, pyflakes, requests, lxml, google-i18n-address -, pycountry, html5lib, six, kitchen, pypdf2, dict2xml, weasyprint, pyyaml, jinja2, configargparse, appdirs +{ lib +, fetchPypi +, buildPythonPackage +, pythonOlder +, intervaltree +, pyflakes +, requests +, lxml +, google-i18n-address +, pycountry +, html5lib +, six +, kitchen +, pypdf2 +, dict2xml +, weasyprint +, pyyaml +, jinja2 +, configargparse +, appdirs }: buildPythonPackage rec { pname = "xml2rfc"; - version = "3.9.1"; - disabled = pythonAtLeast "3.9"; + version = "3.10.0"; + + disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "76cee167e81fc3cc0e0cc696fe58cadd039e19a774c8f4d2e5c0fea724c7aaca"; + sha256 = "sha256-DJjGQAYFhXjAiJhWzxpQ0jRUSrnsNCcNz1KfPEjBoKE="; }; propagatedBuildInputs = [ @@ -31,12 +50,18 @@ buildPythonPackage rec { appdirs ]; + postPatch = '' + substituteInPlace requirements.txt \ + --replace "jinja2>=2.11,<3.0" "jinja2>=2.11" + ''; + preCheck = '' export HOME=$(mktemp -d) ''; # lxml tries to fetch from the internet doCheck = false; + pythonImportsCheck = [ "xml2rfc" ]; meta = with lib; { diff --git a/pkgs/development/python-modules/xmlschema/default.nix b/pkgs/development/python-modules/xmlschema/default.nix index a2bd27d9f1d..0232092c487 100644 --- a/pkgs/development/python-modules/xmlschema/default.nix +++ b/pkgs/development/python-modules/xmlschema/default.nix @@ -8,7 +8,7 @@ }: buildPythonPackage rec { - version = "1.7.1"; + version = "1.8.0"; pname = "xmlschema"; disabled = pythonOlder "3.6"; @@ -17,7 +17,7 @@ buildPythonPackage rec { owner = "sissaschool"; repo = "xmlschema"; rev = "v${version}"; - sha256 = "124wq44aqzxrh92ylm44rry9dsyb68drgzbhzacrm511n1j0ziww"; + sha256 = "1k41zzffg9srhgnvi1s1akaqpwz2z003xbvig8axwlkm7z0d4xiz"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/yeelight/default.nix b/pkgs/development/python-modules/yeelight/default.nix index 36b67e2daa2..b7472d68a83 100644 --- a/pkgs/development/python-modules/yeelight/default.nix +++ b/pkgs/development/python-modules/yeelight/default.nix @@ -9,14 +9,14 @@ buildPythonPackage rec { pname = "yeelight"; - version = "0.7.4"; + version = "0.7.5"; disabled = pythonOlder "3.4"; src = fetchFromGitLab { owner = "stavros"; repo = "python-yeelight"; rev = "v${version}"; - sha256 = "sha256-qpyD4o8YMVu6DiizuBs/44Vz0oPIMR4/YQwaCDNKpFI="; + sha256 = "sha256-lEroQ2Gy1ldeIkkSMYcXJk6j6Ls2zigImrIWOPq70D0="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/youtube-search-python/default.nix b/pkgs/development/python-modules/youtube-search-python/default.nix index 8f31c892d0d..8c101055220 100644 --- a/pkgs/development/python-modules/youtube-search-python/default.nix +++ b/pkgs/development/python-modules/youtube-search-python/default.nix @@ -2,13 +2,13 @@ buildPythonPackage rec { pname = "youtube-search-python"; - version = "1.4.8"; + version = "1.4.9"; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; - sha256 = "aafa940d77ecd37bb7af802da53caed9be8861c6abe3004abb04315155b4a3ad"; + sha256 = "9c75540d41f6dcfd19f2f70fbe8346406e026a016aae56b87c207a0b4ff571e0"; }; propagatedBuildInputs = [ httpx ]; diff --git a/pkgs/development/python-modules/ytmusicapi/default.nix b/pkgs/development/python-modules/ytmusicapi/default.nix index ea832db8a64..8bf781ef3a4 100644 --- a/pkgs/development/python-modules/ytmusicapi/default.nix +++ b/pkgs/development/python-modules/ytmusicapi/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "ytmusicapi"; - version = "0.19.2"; + version = "0.19.3"; disabled = isPy27; src = fetchPypi { inherit pname version; - sha256 = "sha256-Vmf3eZpeRPDYWy6fc8VRYsQZJrwwX3KTs0njfPy6HRE="; + sha256 = "dfd0271f7177173cea9c255730151a10a2fe4a32f9accd2fe31e7645936c90c5"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/zodbpickle/default.nix b/pkgs/development/python-modules/zodbpickle/default.nix index 9a0727c82e9..864155c2a20 100644 --- a/pkgs/development/python-modules/zodbpickle/default.nix +++ b/pkgs/development/python-modules/zodbpickle/default.nix @@ -5,12 +5,12 @@ buildPythonPackage rec { pname = "zodbpickle"; - version = "2.0.0"; + version = "2.2.0"; disabled = isPyPy; # https://github.com/zopefoundation/zodbpickle/issues/10 src = fetchPypi { inherit pname version; - sha256 = "0fb7c7pnz86pcs6qqwlyw72vnijc04ns2h1zfrm0h7yl8q7r7ng0"; + sha256 = "584127173db0a2647af0fc8cb935130b1594398c611e94fb09a719e09e1ed4bd"; }; # fails.. diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix index f2ecc3e7df0..e73052e24c9 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -4,10 +4,15 @@ # Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.12"; }; +let derive2 = derive { biocVersion = "3.13"; }; in with self; { AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; }; - AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.18"; sha256="08n2p2xm7s75q5ps4w9dqg4p3w3baz187n3s5g8rpmd5d2i4zy8r"; depends=[AnnotationHubData ensembldb]; }; + AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.1.2"; sha256="06phi519h709nabs09xqnfyqjilj1fzmxb272hy7gy8g6lvx3g7d"; depends=[AnnotationHubData ensembldb]; }; + AHLRBaseDbs = derive2 { name="AHLRBaseDbs"; version="1.0.0"; sha256="0qr12l940g0pkk8mcz63s17y68wk03vj7almgwlfsz04mzk303bj"; depends=[AnnotationHub]; }; + AHMeSHDbs = derive2 { name="AHMeSHDbs"; version="1.0.0"; sha256="1r9fvkfkzsy58qg3wmr9h1h4ycjpjyxmngnl3dmapp55rd7n49ns"; depends=[AnnotationHub]; }; + AHPathbankDbs = derive2 { name="AHPathbankDbs"; version="0.99.5"; sha256="10wcrglm521xcrfbzc39dkbjvg1pkz0zq70vgnh68akiwmdirp89"; depends=[AnnotationHub]; }; + AHPubMedDbs = derive2 { name="AHPubMedDbs"; version="0.99.8"; sha256="0c9x07i3pmr7rd7i76hmzk2zjfi091p575q75kyy3jmxd0dpgcac"; depends=[AnnotationHub]; }; + AHWikipathwaysDbs = derive2 { name="AHWikipathwaysDbs"; version="0.99.4"; sha256="0vz3p9sx36bwzl9rq0ffh7klbq13pv2yhgjq1cjk7ll8z226c0q4"; depends=[AnnotationHub]; }; BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.1"; sha256="062ap94m6s4w8clg1zlj223wmgbmq19yhksx9fcdcqrxr5kbfv85"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; BSgenome_Amellifera_NCBI_AmelHAv3_1 = derive2 { name="BSgenome.Amellifera.NCBI.AmelHAv3.1"; version="1.5.0"; sha256="1cglml4rlqr5hmf4dx51grx6s25h6xc3lqv569nx2sl4gdz28s47"; depends=[BSgenome]; }; @@ -67,6 +72,8 @@ in with self; { BSgenome_Hsapiens_UCSC_hg19 = derive2 { name="BSgenome.Hsapiens.UCSC.hg19"; version="1.4.3"; sha256="06lx7q7i52lg3vkjkqy492z9ianzgi4nhs9m1jrxjjb4hgbnbyjv"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg19_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg19.masked"; version="1.3.993"; sha256="19533ihgad67bzhavycv6z708012ylz9cw1qdfmk2b7ikf3kiaz9"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19]; }; BSgenome_Hsapiens_UCSC_hg38 = derive2 { name="BSgenome.Hsapiens.UCSC.hg38"; version="1.4.3"; sha256="1k4ya5w0bgcqk06518ax803xfanw6x1qjzm6lsd3nplkjg5136f2"; depends=[BSgenome]; }; + BSgenome_Hsapiens_UCSC_hg38_dbSNP151_major = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major"; version="0.0.9999"; sha256="0290fk7jvlcb1mh6nlyqagqskfh0dvaysj1d6s15bgygnlm3r726"; depends=[BSgenome]; }; + BSgenome_Hsapiens_UCSC_hg38_dbSNP151_minor = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor"; version="0.0.9999"; sha256="1xw8vckhsak35r942yyvlrpbhb2w4vzah8wfgmn3vyj1zklk3913"; depends=[BSgenome]; }; BSgenome_Hsapiens_UCSC_hg38_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.masked"; version="1.3.993"; sha256="1ncsfa5nialkzllxdj9h5c48hrcv7vrvh7wfnw32y6bqdzg4rwhs"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg38]; }; BSgenome_Mdomestica_UCSC_monDom5 = derive2 { name="BSgenome.Mdomestica.UCSC.monDom5"; version="1.4.2"; sha256="16kzb66kjpmf9j92pwh98ah5rhrnfyzdpr0rk659zham6dzga9ck"; depends=[BSgenome]; }; BSgenome_Mfascicularis_NCBI_5_0 = derive2 { name="BSgenome.Mfascicularis.NCBI.5.0"; version="1.4.2"; sha256="1lrdj7aibx4i60hpbaqgk3qir9zjs67mxdgp5jmgmw7gf2nwyn3x"; depends=[BSgenome]; }; @@ -97,6 +104,7 @@ in with self; { BSgenome_Rnorvegicus_UCSC_rn5 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn5"; version="1.4.0"; sha256="1s92983m73bi08ihvyd8c17yx29hz5xxrnrs2if8fda4asw1f3f0"; depends=[BSgenome]; }; BSgenome_Rnorvegicus_UCSC_rn5_masked = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn5.masked"; version="1.3.99"; sha256="0ss14nlr6gqs414ckcz4zmyhfrwdp2snw9wh48yk4s8r4ij3z9rj"; depends=[BSgenome BSgenome_Rnorvegicus_UCSC_rn5]; }; BSgenome_Rnorvegicus_UCSC_rn6 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn6"; version="1.4.1"; sha256="1lyvf7l5vyrsmjhn5kz0lrj784hd0b0bcrwb4lavd3p5g38b3mmm"; depends=[BSgenome]; }; + BSgenome_Rnorvegicus_UCSC_rn7 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn7"; version="1.4.3"; sha256="0bgmgxk5rq6m42z0mcpvq9i7r8rid3ws80jx5g9kkklv5kglfidy"; depends=[BSgenome]; }; BSgenome_Scerevisiae_UCSC_sacCer1 = derive2 { name="BSgenome.Scerevisiae.UCSC.sacCer1"; version="1.4.0"; sha256="1smx3zdmllrx5f1a7hv1w3jc59jwvkd2n37hz6hgb80da7lajn2b"; depends=[BSgenome]; }; BSgenome_Scerevisiae_UCSC_sacCer2 = derive2 { name="BSgenome.Scerevisiae.UCSC.sacCer2"; version="1.4.0"; sha256="1ilz326qx1ikapmsz00hg5g6i637qm9kwc21z93q890h7sgaz4k0"; depends=[BSgenome]; }; BSgenome_Scerevisiae_UCSC_sacCer3 = derive2 { name="BSgenome.Scerevisiae.UCSC.sacCer3"; version="1.4.0"; sha256="1pnd394xfy413nvxq3hrlv33girj8f9kzdzi9gx232lm12av6hxm"; depends=[BSgenome]; }; @@ -122,7 +130,7 @@ in with self; { EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; }; EpiTxDb_Hs_hg38 = derive2 { name="EpiTxDb.Hs.hg38"; version="0.99.7"; sha256="1vsi24q902wqlnbxp8hks03x53n4yh5cmpyyxdvmxfbn1rxfvnyf"; depends=[AnnotationHub EpiTxDb]; }; EpiTxDb_Mm_mm10 = derive2 { name="EpiTxDb.Mm.mm10"; version="0.99.6"; sha256="16zsqnrb3ypwv0sqfmhqmkxqhp90k21in7bjhjf0zagywsyyhpww"; depends=[AnnotationHub EpiTxDb]; }; - EpiTxDb_Sc_sacCer3 = derive2 { name="EpiTxDb.Sc.sacCer3"; version="0.99.3"; sha256="0fdyzxfkdi9x2hbpw1q5g0wm8qwzgbzqdqh2nampdisrbfr73amm"; depends=[AnnotationHub EpiTxDb]; }; + EpiTxDb_Sc_sacCer3 = derive2 { name="EpiTxDb.Sc.sacCer3"; version="0.99.5"; sha256="0qlifdpppxxn2xmb0f1ghjbx47a7rrkrzr2lvky5p8lb0dnh3zxv"; depends=[AnnotationHub EpiTxDb]; }; EuPathDB = derive2 { name="EuPathDB"; version="1.0.1"; sha256="0k23f34hnvcf2ig9sic7gf7pypc2jmwymg605qym7x32bjhi6rlm"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; }; FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; }; FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; }; @@ -131,8 +139,8 @@ in with self; { FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.12.1"; sha256="1ffsf7cnfi3jlwbpkbayw59wwkzpvw9p929c8gwrc86ksdcnjcg0"; depends=[AnnotationDbi]; }; - GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.4"; sha256="0wi92x3cgf8wgik67g863y53k097hr9cjh06s2dqayivs3hwx7ls"; depends=[]; }; + GO_db = derive2 { name="GO.db"; version="3.13.0"; sha256="14apqisww807wcj93slrgijclb99ck94li0q12cb24wrs15q885x"; depends=[AnnotationDbi]; }; + GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.6"; sha256="0c8zz7qdraci9lm39m0brhyghy963wchnw97bd9nksphlpg9l809"; depends=[]; }; GenomicState = derive2 { name="GenomicState"; version="0.99.9"; sha256="0qpa77bsycm3y82jrxq7r27gsygb1qbhkakz3cln3jv3sfkf0aj7"; depends=[AnnotationDbi AnnotationHub bumphunter derfinder GenomeInfoDb GenomicFeatures IRanges org_Hs_eg_db rtracklayer]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -155,20 +163,19 @@ in with self; { JASPAR2018 = derive2 { name="JASPAR2018"; version="1.1.1"; sha256="1iq5b51ryah2ccdx16yyigfa2jiapcpm94l6vgvd4v7b94jjp8l7"; depends=[]; }; JASPAR2020 = derive2 { name="JASPAR2020"; version="0.99.10"; sha256="0nrp63z7q2ivv5h87f7inpp2qll2dfgj4227l4rbnzii38a2vfdr"; depends=[]; }; JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; - KEGG_db = derive2 { name="KEGG.db"; version="3.2.4"; sha256="125dksxg6jx0mh6zfl0icnjca1j7j0i3ml8fq0f4klfbcjvd2q1f"; depends=[AnnotationDbi]; }; LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; - LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="2.0.0"; sha256="13cjh9nrdww0mz6v1187zal9l2q6phicj54b7qcwbxblvz5byakv"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="2.0.0"; sha256="094wnmlgq14cdff6pia8dl4y1127fwxn1cn02p6p8db47bh5vv1a"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="2.0.0"; sha256="0z9xmws8dw8kzjy4qmnlm46rmzn0a4bqazm4yy6jpyq69iqi7mfp"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="2.0.0"; sha256="0zn5mnp7avz0d288ilibg4955cw5g90yk72img5hs9sscc7kl7zk"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="2.0.0"; sha256="1kvvyc7rf159npfi93vvng9c6yn33ngpmjqzqxfjanli2wmspc2q"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="2.0.0"; sha256="0khgsjsp3bn6j81rkzljffz7hr25grkw299hh7ja79jkhh2naibs"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="2.0.0"; sha256="046fgcdnr4yk9gpgk1v6gpg2mv7jb27zlxyqrwf9mcmr28m7f13p"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="2.0.0"; sha256="0lklf8bilbcf1xbb7ggry8x9pd6qwgv5w19pddgl1ns9dgn0g447"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="2.0.0"; sha256="1ig17q920l670kbrinf2939cpvlbdf3zz01fj4bmf1sw4b58v5zh"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="2.0.0"; sha256="0rjm5b63hb1h0kkjqxrldh3d2h7l6qqx2cdl3lf2hn1rpfgifxrk"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="2.0.0"; sha256="0k5dkflsxg0bs2aqcsh0b3vq2clycpxqj138rs6h0w8gr9613w5m"; depends=[LRBaseDbi RSQLite]; }; - LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="2.0.0"; sha256="1y6nivswrsivlylc9413bngli5nbbd1q6rvr5whx3rh9rxvm4r17"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="2.0.1"; sha256="1f9yp9rfaydzz24bhl795379clcinibi4kavxzzavrvqfvkrgw84"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="2.0.1"; sha256="004ajnirlqlw5zknhv456z5ziiig57qmcdp3w2cr7izdk2d97lbc"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="2.0.1"; sha256="0iazyqrqgc4g5kk25vzssfxjxfvp70mhnx4fpwcg73pfy4wizxjp"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="2.0.1"; sha256="1czhw53163cmamigzy30kwa0h3pid95qq47pf6f3b4sy8x3sd9if"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="2.0.1"; sha256="0xwzwhc1ksyp1k3xxd0mdk8bkw1npblwrpalnyd4awlx4lh6k8b5"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="2.0.1"; sha256="1nkgli39szcjh09ywn1a3zbj0k5pqng9ixaqkl0yhqqy626vk0w0"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="2.0.1"; sha256="0lvrjspmzjpx9q77lqwpqmr5jpqaqv8rjyfr3pxyv1d0kfdnqii0"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="2.0.1"; sha256="105nmhlg80jwljkpn73cx4lc4nsxadcl4pfbyl8pj1ppk1cdj1dz"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="2.0.1"; sha256="0p99lx34fgvknw6301r8r375w0mapsan7f8aqjd2jxvjaig2375s"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="2.0.1"; sha256="1hpw675m2y6nm3i3mvh9whxlaz5zpvz4wr55rha7yisxfsj6qq9a"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="2.0.1"; sha256="18pa9f16hn4awynbhmvrkdxdprr2dj0mip132sk1mfkxic2cf014"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="2.0.1"; sha256="18bk6p405cpws0ynh0q17w5fmriplmamhy1rds5rc6hf05lr2sb8"; depends=[LRBaseDbi RSQLite]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.10.0"; sha256="057531mvxip32lyqak4hh964ms0cil29p5cch5fpjw5vbbzidrlc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; @@ -183,88 +190,84 @@ in with self; { MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.10.0"; sha256="0yd9r26l2s3ykw5d2lndnx4m1h401g7hsnkk0wywczdc1xa39y4n"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomAD_r2_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.1.GRCh38"; version="3.10.0"; sha256="1bshq6ncns7xdrpkkc84m4x6a1pnm3ssp02f0d23yhlkhh0h40zd"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.10.0"; sha256="153dy3lx0islfdkmyik7lxp1w2yzb0bqmia673hlwi4rmvns112h"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomAD_r3_0_GRCh38 = derive2 { name="MafDb.gnomAD.r3.0.GRCh38"; version="3.11.0"; sha256="1zsgaxjapw78x2mdbcf31g840pdnbibyjzxd26mgnpv5nyrjbhwz"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r3_0_GRCh38 = derive2 { name="MafDb.gnomAD.r3.0.GRCh38"; version="3.13.0"; sha256="0f1qjngpshdpdg6i05qh8pmr56x4wvx29ism3vsid099ammnxdca"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomADex_r2_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.1.GRCh38"; version="3.10.0"; sha256="1v0sdjmn9z8gqn4yj4v04zycj3ngr32r04zqmkp6y41hcgdr8lxw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.10.0"; sha256="0y42ncmilijdxsgqsmskz7gff3il3fdf2kpflknmz1z9kybzaday"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafH5_gnomAD_r3_0_GRCh38 = derive2 { name="MafH5.gnomAD.r3.0.GRCh38"; version="3.11.0"; sha256="1m793ri39gjm41yfq3yglg7dxyqd2ss0i0vvivqxigff63iz8awh"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores HDF5Array IRanges rhdf5 S4Vectors]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.15.0"; sha256="0sjgjv48qdyhkmaiypqc6v1mi1hdrncz7ff1pjz77xgblpyhcxf5"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.15.0"; sha256="13di3ljv7l3nq5li2qcb3r4y0d205hjl00ys0g26inp86qda5bnj"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.15.0"; sha256="1qbhki6q2hl3vhyl1aaz722aqn5imb45qp7apypyf0qpy8f3jm15"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.15.0"; sha256="0dg0rllh3q1pn9vlji5mymix5kvynwx16jhy8rxm0h7swz1bvkvc"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.15.0"; sha256="1pq6gyv01hwhbmkyhm23j4gl68mdj2rs97b7iv0bfnyvky1qydw4"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.15.0"; sha256="07iqhj76l8bpxjlfdpzd1nn1jf7mwlikdcnb8a7b4ffw5bcnss2r"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.15.0"; sha256="1z9y7sraqikaxnkb4h3bx25fhm1llr0rzi4wg04nv8mjmy27p0dz"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.15.0"; sha256="0i1fcasgmzsj4k1k7i8zgp25ywgkrpr9iwrl3r1lk6iwz70fq9pg"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.15.0"; sha256="0cf9wklw5xkskz87d40d9sv26czxv1dnmzab9cj66viv7h8vzgly"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.15.0"; sha256="00gfh6x8gbx77smmkw6bbqlmbaymzzamrqcjd29kqpa9npgvylnl"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.15.0"; sha256="0zrs7m9582skcwqayxz2w73l16lv3fm0yk26aqi2gqvw75b5sn8z"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.15.0"; sha256="1cbnslagmzm9gx12ay35ccbks9imra2yllgw79jagq38d78pdczs"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.15.0"; sha256="0n44sin2dkyvz1jxqhaicdvmfzd5gbj7xbzvbvqw5w17k8gdxzj8"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.15.0"; sha256="1jasx1fjwwpmas8xzysnnkphinbrdv5ykgispcck4gp5y6q253m0"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.15.0"; sha256="0d2w94r521bfcgvd8zh69mmbf04yw6qzpzgi36a4an806j2x32yx"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.15.0"; sha256="0477klxnxz637dics2csd4raw672db419i1793gm0zxaws3xv49a"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.15.0"; sha256="1g0b7zdx454ckdhv89fwp6hjgmrbgjy83p75qx84lvj02cx57yb2"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.15.0"; sha256="1ill5jzrwjs0n4sfidw505shcr5cvw11gkm646bkcv6g3nybrvkw"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.15.0"; sha256="09i3qcvd14swdhgpv3j9b12zfvaimrml4w5ri9bk0s0w0s6c7wlw"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.15.0"; sha256="1xya53rsf857vd7cykxz5xralmlcgn8mm5vsm3qnmy8ffilxpg0m"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.15.0"; sha256="14w73m2qhvhrqpj4fs9ychc1zl6s7scl9baccbcybfv1n7lkxlwz"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.15.0"; sha256="1mkpy2srkpgds8528jlaysvy3ch5kh9f06n5fyjrbdwnjq4l88dy"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.15.0"; sha256="0qdimflvq01hvqfx715qxw32vah5v0a2k8l7zjkn60d4ck8ykhxq"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.15.0"; sha256="0mrr8zx6hb5rd6j8514iy6kiqkirvr6mjhnfss3dcb3jgj6lax0f"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.15.0"; sha256="0l6vnjvx2dw85g73d2fk3asvbal65iw7kilgxlcas89rwng0z7aw"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.15.0"; sha256="1jyhrikbqnpd9wvdmlsxisp19xgl6wipznn9hgvk5h5my481cf50"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.15.0"; sha256="1nkc51mnhqcrkgniy7j8s4s8llamqz0cidfc4n47jivfxprc369h"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.15.0"; sha256="1jwlx1d36zrnlssrb7ppxjp0bnd75smib7j97fdbdwnshqlyqf3h"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.15.0"; sha256="03r7792xc51vcha32qffbcqvphnn8fxmq4l01dgnc91pzzl4wiwp"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.15.0"; sha256="0priqpr6kv5zvyb7zz1kmgpx0wkgsszd2wils1sixdjp91hmi13i"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.15.0"; sha256="0w86nhasi0sd0zb8ryi33dh649k5jpwk1ya5nq98frzlz9d1dlj4"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.15.0"; sha256="0cmr19xxydl594pjfhk0qniwfj62mkfnz943a67gdncdanyqgqf6"; depends=[MeSHDbi]; }; - MeSH_Eca_eg_db = derive2 { name="MeSH.Eca.eg.db"; version="1.15.0"; sha256="0547q39aig8y860kapn1n5r8yv5vakmfi4ija5192nrxnpc1b0sp"; depends=[MeSHDbi]; }; - MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.13.1"; sha256="1k9zzq5igi4dd92zfaniv8l4hr0b1381wn20ybnc1zl68qgnc6c4"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.13.1"; sha256="0vvi9shain6wqsrs32hzhpwssw5wfsxcq3zq648amhs114slql28"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.13.1"; sha256="0w4dsd2f85qaglqwb1ls94ncinsdhvaxhb8l5vqs7yg3ins23kam"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.15.0"; sha256="1pdhkdn4navl5jyqdq9p1mb5yzmpjjngkv5br381pmiy5slg5psi"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.15.0"; sha256="1d6cz0ldkasmdqzsk05ifxxg1qji2sb7dms31ibrhr4ds03y4843"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.13.1"; sha256="0c3ndl270kd3v7az7dm3ng812nvr85srgxmazhxrfbk0fay962ln"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.13.1"; sha256="1gavxbp6n5jgdhgnm4a2rqfh7rphk2k58pcyk23ldla2mbp2c4fm"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.15.0"; sha256="0lflpha24bnlppjjv722nn679hz2fhvsff57y5i9jfkbliyq4ccy"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.15.0"; sha256="06j0i8nj0093nagr6lhzzszmhdnxmn38c0l7gjdmc48byrpilx18"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.15.0"; sha256="1kzxwp5sy48qa1aav17m8g7bakdc51f3dfigyp6dp0yc2g30wvxp"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.15.0"; sha256="1ndc46ys5js4pn014dbm2432p7n0mzrjd09nhxpxd4jg7rj5b79s"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.15.0"; sha256="1zs7qsx7bryrcqclmfj39vhl6qbvm0zyw4h2nh23ypapjl8kf81x"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.15.0"; sha256="1yls5fwk4ch8rla7ry2l0gajhlqb26iz9gcb4sy9mymlnck4fy28"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.15.0"; sha256="1lmag4gj8gps7wpnxdafkz5fxlswcfikgzslr93mzg38653ka1nc"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.15.0"; sha256="1cvrcga9kcvznff22z89g7sp1jhmyh74wyrznc1i8l80dackhzff"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.15.0"; sha256="0l05y7zi1jwj6m1mzfi8kzp1nfcp5q1nq7w9w4ghr3hjxv2mg7w0"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.15.0"; sha256="1zppv4fr2sjql32k4mc0c6qdm5f97i9aacyfgrjpkhba5qrsyfpv"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.15.0"; sha256="0ycihsvi9qvs5bd5qrm1m27rzhpiyf6vjfi4srs7lplp9z329z8m"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.15.0"; sha256="13dwj7v6i3qc2gpsvf9ra9zz5k7plk5ldld43a1wb614bjszywb2"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.15.0"; sha256="0bqwc68wkh9zbmrgx7rb2383axlbizg2m65qzr8s6zizqawm7lif"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.15.0"; sha256="0a4j83v2hk6y8bxjyzb516d12h4ymhmwpj5cs03cf5xd9mwwbb7b"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.15.0"; sha256="0aqqz0arrrs0pcljdhr30ixsbsh79f9ywifyrs00hfngnb2fg45l"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.15.0"; sha256="1rgjayw05ggcqli9991ix3kmjv5fxiz7c3s5yy889libl70qhsqd"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.15.0"; sha256="01w6z5krfikrsndj9qsq6vx6yzwcwhjs2bj3hmyjm4yyryjap2xy"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.15.0"; sha256="0370mrz00k2zlapxrgf74m7sx3jas977dkp5x694b8y6c1qv6gc3"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.15.0"; sha256="07hjznch109aslky2nhj1pk565mkcc6hr5jphc5njakcjflbwbdn"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.15.0"; sha256="0gb5rcgg2653jbz0l6z8672vldb7jpq66y2kfmsj5bsw6s9xc7xm"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.15.0"; sha256="1j7a4ghdzr87s2qnrjsaf3611wb3cik2irrr9mxfbnxqy4yxyfxa"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.15.0"; sha256="0azkfrilcnxnz96kl5b1vmbw1yc6k4vjkqcrh1gpnkivlxww616f"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.15.0"; sha256="0nz2chxy5wqp0jfmlgam73qvz2d2ypfqr2gjzb4rj9c5q20y75jj"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.15.0"; sha256="0bsic8fhv7cyzlcfbis1rrkvf9r3f4735pg62ypczvdj2yx1pqag"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.15.0"; sha256="0rkjl2m7sjdck3037aj69c37wbknjlbfcx59sb86mspv7q33fhpc"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.15.0"; sha256="0w396xl2yq960yfw55vr0n4d7152w65lkd73jblwk5zqwig6f5qg"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.15.0"; sha256="1dy218w8ry9v9yry5fvkkahdh73aa9gd3nlizdkfs901v2pg2fcp"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.15.0"; sha256="0gv9sslvq0dgfgfl04kvhkyzqfi8napkwbisdkfg21x03id16481"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.15.0"; sha256="1xcnjn70qbr2fmsw715wifl61021ghdyhil8nlylm3ydj89qwv6g"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.15.0"; sha256="1l0ylw0i6900ikmlb8z1vi94745cbgj3imfj8xys9r8cdgnzn16j"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.15.0"; sha256="0240iq4fdbi03s36pffbgm375g3ch4gqsyjs79wlhqg7bizvsr93"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.15.0"; sha256="1qa7w7v301pi6lmd31afzvgrxmvs504054hq6rzr33ix5gm035ny"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.15.0"; sha256="0s0442s9z09bcxdbskrg9myqjghl1mk1mysyl90dczv0mfl0hrqd"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.15.0"; sha256="1h807bbzx1f916myi5p1xanvbffygdj2vghhf3spf8bcdm3avcgn"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.15.0"; sha256="055pa2wjm587f2vik92x1fhrk23zhy85sbrbfq2zznikvfjlbf7v"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.15.0"; sha256="1yr3s3b6ds75xrsg9srdkcg53d72wna2cnx5xn9932887125cybx"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.15.0"; sha256="1c0xg9adpiwbwmwaak90pkh2vpakpvwjan2dgj89cxv0v2g5kn7q"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.15.0"; sha256="165vdjc9gikwnyvihvkci0n5gbxyna962yiyi21qd4csvin12qzz"; depends=[MeSHDbi]; }; + MafH5_gnomAD_r3_0_GRCh38 = derive2 { name="MafH5.gnomAD.r3.0.GRCh38"; version="3.13.0"; sha256="1hhm0qla0av6fcgrf4wivwfczs7b6a473qswii2axpxq7srbsgaz"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores HDF5Array IRanges rhdf5 S4Vectors]; }; + MafH5_gnomAD_v3_1_1_GRCh38 = derive2 { name="MafH5.gnomAD.v3.1.1.GRCh38"; version="3.13.0"; sha256="1fqw3qv4cw043ifyrcddsq3z13y4gk12cg7j39bg1am3msa7zmbg"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores HDF5Array IRanges rhdf5 S4Vectors]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.15.1"; sha256="1d33krs3xs0pa14gm7haiaglnlx5z41m6gx92gg8ckfpblyz49q2"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.15.1"; sha256="195hs3x0sfs4s5kry452r0fhnq19ayv82j4dr1394zr104r17kb1"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.15.1"; sha256="1kyjhnfv3b0jxdali2v1wdqd1zkl9vsf2z9ba6dkhlm1hghsnv63"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.15.1"; sha256="1szzcnf5fwaqpj2ra2b1xics971lwg3rnzdria8j3yl705zxnl3g"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.15.1"; sha256="1pgfhm5qhm9d7s0sr4iij7272m2i6y9di51r137mrmpc5fcc1mmx"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.15.1"; sha256="117sz11lg3kl90v7bkai3acyvcxjggar8fpgyac99369pinkqikp"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.15.1"; sha256="1hwhvm7ip3kjdb31glasixqzwja37352x70id18n2bfbjgq4x3r2"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.15.1"; sha256="12dmbr6aynxyfg0cv5jrshj27rmk89apbpsg1zxf7cmqkkvq8bcv"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.15.1"; sha256="1y6r6hillawafxgxvkcffg8bx125ra6b4f9cclcz1n3qzqfnjj0s"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.15.1"; sha256="0d363769blvq0hm3yzbff007sn3sq8fb4gay8qgrcj2jrnnd4wp4"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.15.1"; sha256="0g9m2y209gl6nyn05j4fznnh21raz8xwj1if7zb1aixxzykqi313"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.15.1"; sha256="1z3id2838fd14x9nib931cmjb0x339hq1izdr3gq8kc4yfvl40r5"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.15.1"; sha256="0fbg3sv5addw9ad586nyh0vbwfdnjzwqnqxa8jz8plpmjn043wl0"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.15.1"; sha256="19hp0f0vqlzdqbn9qs839b8sflbcww02k7fzsmyzpqd38kvhwf2w"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.15.1"; sha256="19jjdp5cq1pisgk7nxwi8cdzjk44bbh02fjy027f50i6dnj75i7i"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.15.1"; sha256="0y53q8q1ca93ri6msnjzj3m6rqangidfvvchirgk9pa4k67dh534"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.15.1"; sha256="0jsbncm9ggi63fjng8nl08bhzajgjrckfq2ngqbcnmf8p1gzg60a"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.15.1"; sha256="1w47fmy9akwxxsvdx7d1s0qdzafxyghl6lh33cy5jcb4bj525635"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.15.1"; sha256="0bq8r70vv55shfgdx94qiympk0vf9rf7xr467bps82ks0kklzr7v"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.15.1"; sha256="1k5dfwm5fn4zghaphsjs0f7jzjcdcay1afm2c09qyh7xv9m1cpry"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.15.1"; sha256="0idh5djnz1wwxp09xpjwac4dhz6kvwp1l0j92195b0xwv4n11pzk"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.15.1"; sha256="0aprxgrlz7hnk31fr6vqpprahjn07r48dnva9gszgyp740mx1m1d"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.15.1"; sha256="0wbv1f5bsb3xl8rj1qndb0n77rmg2s9m5nl2f95naqaf3hfypsmd"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.15.1"; sha256="07zzwf4aqpkvjmbbvzc6bq662frxblsx4l0ljna70gr4xb218swl"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.15.1"; sha256="1fls5b3w6n2n9vy4fsvri74f6r2qmlrx8vlrgqmb7plxdp35q0jw"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.15.1"; sha256="0fphjwbxnymf30ccppjyfgwz0pv5n1lwzm7h05lppk7a7f8ys665"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.15.1"; sha256="0921dxba9crqml8in0hwnwlzcqvjhhi94mllbmksp8cwka48rzs8"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.15.1"; sha256="087pcpbskgc59c04bn3201d4agy9vsma0r1wsf60zxr3l491yn6v"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.15.1"; sha256="0drqyd131l7vr9v899hjvva4d5mmv7fbhmflgz49i2iy3360xz32"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.15.1"; sha256="0i3j3392d690xkg7cfzqnw0s09q8mpiq2wfpifkk0hbxnc5aahwd"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.15.1"; sha256="168jy0v39j2fpy59s3dpz0xs3axmnc7kb1dv88b5j1xccymkd3gl"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.15.1"; sha256="1ibbh07nczp75f0x2mnq5mnli6fgg7mn2aqk434l3iwjx686mcpj"; depends=[MeSHDbi]; }; + MeSH_Eca_eg_db = derive2 { name="MeSH.Eca.eg.db"; version="1.15.1"; sha256="1b16fqx56sl1ask5hk3krw2p7ph5q9wg78zygbd1pbx04q95469r"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.15.1"; sha256="0p3gf9hwr3hrzlczwr7lhwxnl46iqfz66dvz38h7c02bjlpjjdjd"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.15.1"; sha256="0wda4hkzwfvkn51fchzpwgc5p9964yyfjg8bpvk2331zx9lsvgs2"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.15.1"; sha256="0d72haww3zi1x06qllwnlsrwkwivn6z8ws9nkrnb24vn3saxv41b"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.15.1"; sha256="1xbwkxn351yhjbc529y4fkj366a3pnk1b8s3h1ys5w8czz3szfn3"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.15.1"; sha256="1cgfwp8hk40af0d5rzi3vsmvx22jp1nwsgyld1mzkry2i8ilbzyj"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.15.1"; sha256="1r2bnakd47gq95s47rywhak7csz77zphml0zfrchi189kh01prg4"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.15.1"; sha256="1x3rjw2hvzxaq68abyh8b9bw1zizkrqxj6pgd5d6ggcl8l0x1fnz"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.15.1"; sha256="156dc2vssa8x0a0985fhyx7h5vaw4d3ingz0s09181ai9fxqc1jx"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.15.1"; sha256="0a3gdmpp9y6s6aw7lyh7j25dahgmkb0azg7g57073fqwhgivs2mx"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.15.1"; sha256="1gil8g9h8qyd0b4qmqrk7dakvjqwlychzld0wv20z7hipqas975d"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.15.1"; sha256="1p1f6vk1f360zx4wkzcyczi4p4x6mgf4pfrvhslz4kn6xg0cnm73"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.15.1"; sha256="16372gs4nh9cr18xy4nzssjmdarxbkx7c6208s4vx6232mbc1azl"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.15.1"; sha256="1557vn9sy1a2picwj27gkajqp8qlqza0yqf69czimd1myskdicps"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.15.1"; sha256="1gi2v9x0jja6ambdljp9m11g6yhd3wcfcjblgx58i42ix5h5mviw"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.15.1"; sha256="1vplci90jb1cihwbxqkynqk9frr7j09gh80q020dhm24f3rwlfqk"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.15.1"; sha256="1fmwfmws100qmg3wy25qg0s36nk81rwf6b1csvqg4vfy9p0r2pdw"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.15.1"; sha256="019ydfl6dqymn8yk2n101rdrmyv82ypcbvwmslimdhnlk3bzrj3a"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.15.1"; sha256="1jadbca3c3xw24p8zvrd3q7ijjrrfjxkf1bw08ay3a9gazqyv0rh"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.15.1"; sha256="028lw4xjd1v7afp1l0xizswciy1hxhllrf9ij328si5a0kb3dxwc"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.15.1"; sha256="1hdk3s3ixh1haqp70ww547cbnwhllk6fhc4fgriidw0jivbkawx1"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.15.1"; sha256="00hy436bbk7jza00dv2xgnbji3k72x405n88pgd8d9rgj7cmqvjp"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.15.1"; sha256="04pprh5m431cpk4whfsiqb8fglda82jk4d06nhlz9k9nd5x9np82"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.15.1"; sha256="1a0q8xyhfvjvdsxq5hgh255q3rg823l1b8nyswnkai3sl3hq3szd"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.15.1"; sha256="0z4l55029lrmvysj26vn97c690yyhji46axvxsdjvzwp8llhwy3m"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.15.1"; sha256="1h1ci6y0hjii1r6gp24y2m7qqn8d0r954swbc9crb0i2mfak7l1a"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.15.1"; sha256="1rfxbfz72xazay0rszhjvxxqry532dx72kkp5vd0pi44536kly49"; depends=[MeSHDbi]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.15.1"; sha256="100fcybyv4lsnxj23ndchhn25i2bfppk6w0y2lfnrla1vn8p5nnp"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.15.1"; sha256="1y5nh82hbwh7higzg0fv4rkvxl2p988w7aznygaq5z3g1q15l9sp"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.15.1"; sha256="09vj1ix13kxyb330s69nnig07a7cwyz7nasvv5kv83cnc27df92m"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.15.1"; sha256="0gmpcabxs0d61krhyllyrb92x0xgr67jv2wc8qbjv8m8vpiynnxh"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.15.1"; sha256="05ybk27chnxf3mqvngfzlrmnlpjdraqzd0qcsj6zmhsyx6j20qh5"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.15.1"; sha256="1rkc9gv9an0zan04qalmyvry380yhf2vx8scfvck9jwkq5x05w97"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.15.1"; sha256="1nak2sz25l8mc3f60h84519wm7lb8iamj9116mbf4b6ybdp0k4gd"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.15.1"; sha256="16j9wiv0lgik94yp7vqgcc5lykjynn07sbvvq2llcyvr6n3l3gwy"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.15.1"; sha256="0j0ygcrfx2df2q597wkkiqg9264n2v7bsh3kfvra9ma3wdxqlipd"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.15.1"; sha256="0dnhjs43v9q42w82km5vvs8p8zniljvskiv946psy2z8l27q6srj"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.15.1"; sha256="1n3kmkqgb8nnm13jrhn6dzpjcqgddf7k68vsm52bkg7dh3dfcn8v"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.15.1"; sha256="19waylyzyga4zqygar6509gq36a8z36fbpz55msb0zsin24s0y82"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.15.1"; sha256="0plldymwirg8hyj9yv5jw4ldrlnvf5dx60gymb8rgmmxvrmhay66"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.15.1"; sha256="0ixlxcakcc9f6d3dzxfdda4nh5gnivqvbi9dw7c85c0145dgnpzx"; depends=[MeSHDbi]; }; MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -272,8 +275,9 @@ in with self; { Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; }; Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.10"; sha256="1gaq6dnxb83gnlcc544clljgvxwjw98idbq3v6ipqqlx3rdki2xn"; depends=[AnnotationDbi AnnotationHub BiocFileCache RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.12.0"; sha256="1s9gdyqxbr944ksr1n7ik15qmh6sq264z3d77iyjvbrba9kx0hpc"; depends=[AnnotationDbi]; }; + Orthology_eg_db = derive2 { name="Orthology.eg.db"; version="3.13.0"; sha256="0205lwgdh94ha4dsr4qm9ypa6i433swlqda5bgn1hrkgz0bizbnw"; depends=[AnnotationDbi]; }; + PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.11"; sha256="0ckhrbhcxf7lq1hz1lrkrb7djjsfy7m0abf3665aagk6vvzigxy8"; depends=[AnnotationDbi AnnotationHub BiocFileCache RSQLite]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.13.0"; sha256="1rc2vlfjxyrgx0csiiw8ambsc38c2yly1lzpnfq0lbrz3vm4r12n"; depends=[AnnotationDbi]; }; POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; @@ -315,7 +319,8 @@ in with self; { TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.10.0"; sha256="0lqir16l8wphhpaizmvgmjzk40p90rzgqndgvbms7ickinrpg59s"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.13.0"; sha256="1r1hfd1z2rqnhs2s39clnfznlncij503dkpadmdiz3qsfv4x7glc"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Hsapiens_UCSC_hg38_refGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.refGene"; version="3.13.0"; sha256="07b1bxg17kql6kivwz2gwwjfk9b052q610jciw7c2g4lr425x7ja"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmulatta_UCSC_rheMac10_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac10.refGene"; version="3.10.0"; sha256="1d1gvs6877649zwgja1z5x0mgci2kirbj7pzhb22xyinif3bhz26"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.12.0"; sha256="1a0wbh4dajpgynmw2iwbvp836nklzlk0cfhqnwmqq9l4gzzh2w07"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.12.0"; sha256="1k7mq3p96wfd0694zw00hs4529zvv8nnfdwlsb94bn11qjhr1zrz"; depends=[AnnotationDbi GenomicFeatures]; }; @@ -339,88 +344,89 @@ in with self; { XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; adme16cod_db = derive2 { name="adme16cod.db"; version="3.4.0"; sha256="1vn9s1lrl6zzs00madb111fdzqjfb45mprpjqap8bvib65942rvq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ag_db = derive2 { name="ag.db"; version="3.2.3"; sha256="1h0nb5z742pbh7hc8bwqkk9vh16kac8m3h3bh4v5flqfqw6rn8d0"; depends=[AnnotationDbi org_At_tair_db]; }; + ag_db = derive2 { name="ag.db"; version="3.13.0"; sha256="005y4whqjc8ndr1yjikzcz9196hvq3d04lz8pqfmhk6kyjljpgzh"; depends=[AnnotationDbi org_At_tair_db]; }; agcdf = derive2 { name="agcdf"; version="2.18.0"; sha256="07hq41dwqs7yy2sck8p7zl3v9x4bgl35kkycpazz5ql2g5zy6b7j"; depends=[AnnotationDbi]; }; agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.1"; sha256="1v714abdpzhwa450zr66s1yjpxl6lkwi3wjbwn8phn87cgf8rj7q"; depends=[AnnotationHub]; }; alternativeSplicingEvents_hg38 = derive2 { name="alternativeSplicingEvents.hg38"; version="1.0.1"; sha256="0im87mrh1n6kv84q6lm4y15lb93rih88zdpa0jms5az91lyvsf25"; depends=[AnnotationHub]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.12.0"; sha256="07xdk002a41yj79d60a63l5wmyyz2x9py89nh2hnsqm2cvx90wk2"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.12.0"; sha256="01cg5g8ikgim46s470hp7g6pnln8szwr1pmpysyad3w4ipd03asl"; depends=[AnnotationDbi]; }; - ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.13.0"; sha256="16agn9hzkgmv5nvmc9v240kzwxyk4s6xlqywns5w4z9agwffpxzn"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.13.0"; sha256="1mamn9mfh43m0bym7yfi1k7v08j6qdy3b34x1rs0k3kcsapwsmsq"; depends=[AnnotationDbi]; }; + ath1121501_db = derive2 { name="ath1121501.db"; version="3.13.0"; sha256="0v4vapbns71dpv09857lyrnliq202i8yi4ar9z81wbpbc22lhf0d"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; - bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.12.0"; sha256="04mzghsr386fs3wr97cdnzclcynxpmmj3zklx4cjhl9q28jvk1nd"; depends=[AnnotationDbi]; }; + bovine_db = derive2 { name="bovine.db"; version="3.13.0"; sha256="06692b1n0lzhg0biixipsnwx33w9y8wkc7pc5q1lkjfzbmd2inml"; depends=[AnnotationDbi org_Bt_eg_db]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.13.0"; sha256="0axvi95sldkyb9hcfs76wwba61p4yljmqwd87773xlrydrxci511"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; - canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.12.0"; sha256="09y3l6ilc7r6m9ghvfsz5xw1m9xl608x9gwbfz9rq33dszvmmssd"; depends=[AnnotationDbi]; }; - canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; + canine_db = derive2 { name="canine.db"; version="3.13.0"; sha256="1x1mlh0p6r2l5kclarqwgiw9y64xc8jhp6252hhpl9bpnn638n3s"; depends=[AnnotationDbi org_Cf_eg_db]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.13.0"; sha256="0jyj31g9m5sl8hpjsq82lg9zqk4jf5xjcmnws5r0gvzvn20in69j"; depends=[AnnotationDbi]; }; + canine2_db = derive2 { name="canine2.db"; version="3.13.0"; sha256="1xzz0vivdypwl6kaq2ba02jkpxw0r9r98297ilksdh8m71f244si"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; caninecdf = derive2 { name="caninecdf"; version="2.18.0"; sha256="1f7pf3y4ccmj6681haqk8ds3dlzkv99s22m2r462dnnf38n17l3p"; depends=[AnnotationDbi]; }; canineprobe = derive2 { name="canineprobe"; version="2.18.0"; sha256="1y70rbxlbgx58vaxp1ry5jngvzz9prcbgd2ji00074ilx4k2cxn2"; depends=[AnnotationDbi]; }; - celegans_db = derive2 { name="celegans.db"; version="3.2.3"; sha256="03ar84ji94a5v8s5ykcv4c72dxsmqkiyrz31dfc5ssvn7cgc9srv"; depends=[AnnotationDbi org_Ce_eg_db]; }; + celegans_db = derive2 { name="celegans.db"; version="3.13.0"; sha256="15gr1l3j9s1rgq0j1mi12d4lk9izv7nck5h53icbph92j02fihng"; depends=[AnnotationDbi org_Ce_eg_db]; }; celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; - chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.12.0"; sha256="1qsnbxd79cvwkj5883p2ya57afkknsnyps11iy0qhl5jinvywi6l"; depends=[AnnotationDbi]; }; + chicken_db = derive2 { name="chicken.db"; version="3.13.0"; sha256="0szb7sgassw10kzm8iz8h3fdbxm6v0kz95yb3a9icj2chi5d1m2i"; depends=[AnnotationDbi org_Gg_eg_db]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.13.0"; sha256="1zz5vqmdy33fykqvkdf3plc0vnkk429bah82qv9fnyw3sabpi914"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.12.0"; sha256="05hvlfikgbbhc3a6h2bf7d3n7dqs5jk6qbxg8pk7bcbj17xndacq"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.13.0"; sha256="0ix8278z46gf6n7hbp9v80zv4r1lvisfag1mi0fxlr2ss3j7d79w"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; - clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.7.0"; sha256="0lp6qb4f3qsm3krcagl5fd403i5yz5apimf57wlrj99r8zrax4s2"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.7.0"; sha256="1f9lqyr0slynb317vp4bys3s9y9ivxnyayy6zh8cilsdz64glzmj"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.7.0"; sha256="0f6g20zymxnamhspv18cz32qd842nxwyf8mwznsn5yhf3brab437"; depends=[AnnotationDbi org_Hs_eg_db]; }; - clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.7.0"; sha256="0xzzyy8ppwgii0ymkg4agrhw84qgb6hdr8pyh8flyqyd2xbih9xa"; depends=[AnnotationDbi org_Mm_eg_db]; }; - clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.7.0"; sha256="1rf06mj4s6dqi77982wjjs0ssb53j4rk7q4k9wq6iwj4xgz29npk"; depends=[AnnotationDbi org_Mm_eg_db]; }; - clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.7.0"; sha256="10qh0cz0jyy88nh43p3f0i588r0d8xqkgjr6s62i1273bkrpijr4"; depends=[AnnotationDbi org_Rn_eg_db]; }; - clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.7.0"; sha256="1gh3jimr6jjkgh3zgvw9s1gynyawz8gckm9xghwsl9rii7vzy135"; depends=[AnnotationDbi org_Rn_eg_db]; }; + clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.8.0"; sha256="197s389bdzzqyvfrkrn6zqkm2d5s6rnays9hmsdrilxrm9gw32ag"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomdhumantranscriptcluster_db = derive2 { name="clariomdhumantranscriptcluster.db"; version="8.8.0"; sha256="1qybsx6xj892pqlkv16cmc890shmm68hak4vcl1rd68i040pp75p"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomshumanhttranscriptcluster_db = derive2 { name="clariomshumanhttranscriptcluster.db"; version="8.8.0"; sha256="0ya6x2pqlzs7ssis2xa78yfrxs8zkyim3s8h8hbbnyhin6d1p4ia"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomshumantranscriptcluster_db = derive2 { name="clariomshumantranscriptcluster.db"; version="8.8.0"; sha256="0xnb0lw19bvwz75wdznmx0sj9gmjksry9kz7qx25w7msjzw1a56c"; depends=[AnnotationDbi org_Hs_eg_db]; }; + clariomsmousehttranscriptcluster_db = derive2 { name="clariomsmousehttranscriptcluster.db"; version="8.8.0"; sha256="0h4bnixh55rxy7ng0psl4i3szw3drkqvk4rypv2pjb30k8b8x9ad"; depends=[AnnotationDbi org_Mm_eg_db]; }; + clariomsmousetranscriptcluster_db = derive2 { name="clariomsmousetranscriptcluster.db"; version="8.8.0"; sha256="116bjs6rmb56vphgs77hhn905yxa83gsydvyji1k9azm1kbz9rbc"; depends=[AnnotationDbi org_Mm_eg_db]; }; + clariomsrathttranscriptcluster_db = derive2 { name="clariomsrathttranscriptcluster.db"; version="8.8.0"; sha256="1vc4za4drka441wrn85b4hc2m6dvk9r33w0fd0gf0zi5945samc7"; depends=[AnnotationDbi org_Rn_eg_db]; }; + clariomsrattranscriptcluster_db = derive2 { name="clariomsrattranscriptcluster.db"; version="8.8.0"; sha256="0i3d9m4li08mf4g8ic5zgja80vj0vw1865pfpj1kra6sb6r2irhy"; depends=[AnnotationDbi org_Rn_eg_db]; }; cottoncdf = derive2 { name="cottoncdf"; version="2.18.0"; sha256="0xfwwla941fbxddykgizpar8dh8q459src7kc5wyrsd3swp3zyp5"; depends=[AnnotationDbi]; }; cottonprobe = derive2 { name="cottonprobe"; version="2.18.0"; sha256="04mfjd3a7ikif4pv46s6h9dj2s912w8ihg4yyiii7s3jlmvy62ah"; depends=[AnnotationDbi]; }; cyp450cdf = derive2 { name="cyp450cdf"; version="2.18.0"; sha256="1mbqn9940sxc0ksvykdk3i4jvnkv9q91igwn1rwmv2z18hz18qf0"; depends=[AnnotationDbi]; }; - drosgenome1_db = derive2 { name="drosgenome1.db"; version="3.2.3"; sha256="1m9lpgy64a1wrlril8sy9vriq7l3nzw9yzmf5kis6lij6g8mk7nk"; depends=[AnnotationDbi org_Dm_eg_db]; }; + drosgenome1_db = derive2 { name="drosgenome1.db"; version="3.13.0"; sha256="0qhhmgjx5yhbdwid6xjp6vbiql8qrh952rq5gwsrhra6812dzwnr"; depends=[AnnotationDbi org_Dm_eg_db]; }; drosgenome1cdf = derive2 { name="drosgenome1cdf"; version="2.18.0"; sha256="02x6kcnzayx3adz5kjrmfcly36j6j5xwwknd16nskh9050g8xg1y"; depends=[AnnotationDbi]; }; drosgenome1probe = derive2 { name="drosgenome1probe"; version="2.18.0"; sha256="1vzf8197nkbdqdpafpafxlkcy61d6mwd7wcbakdhq5493dwhdi98"; depends=[AnnotationDbi]; }; - drosophila2_db = derive2 { name="drosophila2.db"; version="3.2.3"; sha256="1k19q093b76yy18ynxma27zk4d5q71sa0gj9n8gvgzvnmlzimpjg"; depends=[AnnotationDbi org_Dm_eg_db]; }; + drosophila2_db = derive2 { name="drosophila2.db"; version="3.13.0"; sha256="03lnr2k1dk784mid0ax7v96hnawp5275a3nnzryz8bnl5052fwds"; depends=[AnnotationDbi org_Dm_eg_db]; }; drosophila2cdf = derive2 { name="drosophila2cdf"; version="2.18.0"; sha256="1w8k5br8nl7m5l4r05af8nc2wwnlpxxl8ncvvhqx5annlb2ynrg3"; depends=[AnnotationDbi]; }; drosophila2probe = derive2 { name="drosophila2probe"; version="2.18.0"; sha256="1b8wnkyg0p7cffs3ka7by295jsys1sx2gpbj2j63239f0dylpl0i"; depends=[AnnotationDbi]; }; - ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; + ecoli2_db = derive2 { name="ecoli2.db"; version="3.13.0"; sha256="1i2arr26hch7lmx2bixzy4l0zaa0gynah4dfwa98cvb24ahqqj9f"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.12.0"; sha256="0by1l28is01a5pbg5clci9vk54nihfbddi3ffn9rav1673l3qm1x"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.12.0"; sha256="0zyp0vk5kvb1jkmj2a5qmylh9m33a1lmg6vm1k5g7ln9fah130bg"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.13.0"; sha256="1xpla7q075b8gfbsp6ca8bk8qxib7wjz2w3lyhda08qaf5qnpywa"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.13.0"; sha256="0wihjsbax9q5wc1jnxs8s4amxq5bvlghkwjx5vm8hi6zmjl6yhqv"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.7.1"; sha256="19isa4x8js0pdb4k8a11bw3bzmzv6jc4jphzrvav7piqkvrgykzx"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.12.0"; sha256="1q4i4hg3aap8553jsb4w02p3vbd3pc4w5ry0cpicd3zh1w7bn846"; depends=[AnnotationDbi]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.13.0"; sha256="1ck3bfajzagk4k2nk6481i3lzin1m3y1pcwxjsq7g0v3k4mj2rpd"; depends=[AnnotationDbi]; }; geneplast_data = derive2 { name="geneplast.data"; version="0.99.2"; sha256="17smdm98djj9n7h6w7wy5k5q466zn9kqvs47qvf8kdmahghrdhii"; depends=[]; }; geneplast_data_string_v91 = derive2 { name="geneplast.data.string.v91"; version="0.99.6"; sha256="0mc26d0sgmpmfmqsqinqv5k6vhg0hlc8hsjkcnvf369yav224nq1"; depends=[]; }; genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; gp53cdf = derive2 { name="gp53cdf"; version="2.18.0"; sha256="11p69rxia8bqajix3jg34vnhczyxgpq50k5kdh878h7bn0mpg6bj"; depends=[AnnotationDbi]; }; grasp2db = derive2 { name="grasp2db"; version="1.1.0"; sha256="1aq19myhcl9kdmzy8f4c3ilf0s0ng99rl58jja2xlmqsm2hik7ya"; depends=[AnnotationHub dbplyr digest dplyr GenomeInfoDb RSQLite]; }; - greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="2.0.0"; sha256="0j4pd653vlfpd9gq6gi459lra8xhyknjrzadkx9d3zjy0hcwpj7r"; depends=[metagenomeFeatures]; }; + greengenes13_5MgDb = derive2 { name="greengenes13.5MgDb"; version="2.0.0"; sha256="0j4pd653vlfpd9gq6gi459lra8xhyknjrzadkx9d3zjy0hcwpj7r"; depends=[]; }; + gwascatData = derive2 { name="gwascatData"; version="0.99.6"; sha256="1xhmzl06vivq8x01h60q3c4vql67wjgjfs35j4ifmixp1qhicgga"; depends=[data_table]; }; h10kcod_db = derive2 { name="h10kcod.db"; version="3.4.0"; sha256="0f30n339ib8q478a7axjdh8hzrqws762m680ha0sxm3a0nxwapgg"; depends=[AnnotationDbi org_Hs_eg_db]; }; h20kcod_db = derive2 { name="h20kcod.db"; version="3.4.0"; sha256="0csh59bgpn5xyaw6bfg7nvi9vcvjd4f66f0dr3xh7c6316835mnx"; depends=[AnnotationDbi org_Hs_eg_db]; }; hapmap370k = derive2 { name="hapmap370k"; version="1.0.1"; sha256="0n6rmrqcbl665a1l6jxk1gn6518x4gxadzy5dc9k9v01cbh3qzmw"; depends=[]; }; - hcg110_db = derive2 { name="hcg110.db"; version="3.2.3"; sha256="1rdm6fcfslcyx7hhl658pvgcyn8sl5d08mnp0hcdzx7j6p18ryin"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hcg110_db = derive2 { name="hcg110.db"; version="3.13.0"; sha256="0g4j80rn76cm4dcdan091awlmxldq5dp6lhr7g7gqbiiq5czbbmd"; depends=[AnnotationDbi org_Hs_eg_db]; }; hcg110cdf = derive2 { name="hcg110cdf"; version="2.18.0"; sha256="1208b5sn9cdsvz4wa29ha5vp9mpvafkq0adj7nlzs4yav2z26van"; depends=[AnnotationDbi]; }; hcg110probe = derive2 { name="hcg110probe"; version="2.18.0"; sha256="0avr5dmm86b81fli5zb2vp6ax8imqxvc5bzsksq574a8rn6xf1dq"; depends=[AnnotationDbi]; }; - hgfocus_db = derive2 { name="hgfocus.db"; version="3.2.3"; sha256="03l9r1517varyl561s3x27fs3sasfkp2g5vwys8axqy7ixcllwcg"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgfocus_db = derive2 { name="hgfocus.db"; version="3.13.0"; sha256="0wi1xlmyad1ni071vmrfl374brifmpzk7ylnz8xvinxs66w1yakv"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgfocuscdf = derive2 { name="hgfocuscdf"; version="2.18.0"; sha256="0vxgz3wwjf4qqzpsa8d03s7p2az9xbzlkxkdj0czcj67nmq467ya"; depends=[AnnotationDbi]; }; hgfocusprobe = derive2 { name="hgfocusprobe"; version="2.18.0"; sha256="0fizkj2g1imslxk43ibf52nj8jzsfryq7h2pzhvqw5n9vnpinrc2"; depends=[AnnotationDbi]; }; - hgu133a_db = derive2 { name="hgu133a.db"; version="3.2.3"; sha256="16hl674id1c0y2gi6q5y7dfx7gacpdsxavw1ifar99h9pnigzskm"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hgu133a2_db = derive2 { name="hgu133a2.db"; version="3.2.3"; sha256="1swh2j95f9xkvhi0lyvk4a1gyj5d1lgrsnc2fj57fh4l9763nzk8"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133a_db = derive2 { name="hgu133a.db"; version="3.13.0"; sha256="00jcginfs161ls9hxsvynbrghg3awjrphnc54b8g0gj8g6x22pll"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133a2_db = derive2 { name="hgu133a2.db"; version="3.13.0"; sha256="0wmjf6hwfm4znnm6xcpf0z57f2r3i39rjgspyvjamq32knmq8vqs"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133a2cdf = derive2 { name="hgu133a2cdf"; version="2.18.0"; sha256="0lqllzvp0w3s46kjvpvjn1snz63im33m3hhvnkl3knb86k6pn3za"; depends=[AnnotationDbi]; }; hgu133a2frmavecs = derive2 { name="hgu133a2frmavecs"; version="1.2.0"; sha256="1qy2z6z135q8xncjqn1n31xg8az9wnwrz78cis57lzav9r0fw853"; depends=[]; }; hgu133a2probe = derive2 { name="hgu133a2probe"; version="2.18.0"; sha256="0ais6f92kmjmzywsdqvxcd5fs6y7kf0ip9wm62szhahyl9chwj9k"; depends=[AnnotationDbi]; }; @@ -429,33 +435,33 @@ in with self; { hgu133aprobe = derive2 { name="hgu133aprobe"; version="2.18.0"; sha256="15r9zy4g9p86344zf0w7m0vfln8js19kmr68vq670kncf6j6ypbn"; depends=[AnnotationDbi]; }; hgu133atagcdf = derive2 { name="hgu133atagcdf"; version="2.18.0"; sha256="0rbnhzwbv6nbkssdgsibjpnqfads7x9rpgy2n7qy02mkr6kysndg"; depends=[AnnotationDbi]; }; hgu133atagprobe = derive2 { name="hgu133atagprobe"; version="2.18.0"; sha256="1qxrdi0rjj8kcl8rl3lack5ky25n39hj5a91scd0fy32zvnazmk6"; depends=[AnnotationDbi]; }; - hgu133b_db = derive2 { name="hgu133b.db"; version="3.2.3"; sha256="1ia32fv32s6f0sdlvzz55ficivsrxyxwkavyrk435gfmnjy07xmv"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133b_db = derive2 { name="hgu133b.db"; version="3.13.0"; sha256="0w0p53w1kqahwxramb62lngpdkkymvdy0xfzcscswc8iddsdvb0x"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133bcdf = derive2 { name="hgu133bcdf"; version="2.18.0"; sha256="0dlg45pf35cff48704laryrxgwr0p31njki6c74ibxacpxmvwzv3"; depends=[AnnotationDbi]; }; hgu133bprobe = derive2 { name="hgu133bprobe"; version="2.18.0"; sha256="1i8v1fbjfnzv556551kbj13q9i0lvzjgvzq8xapmwph8y86bfcx3"; depends=[AnnotationDbi]; }; - hgu133plus2_db = derive2 { name="hgu133plus2.db"; version="3.2.3"; sha256="0j855k58syb12pxhkpxf6g0yglzq8kprs3j14cfwif56d5xj8sx5"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu133plus2_db = derive2 { name="hgu133plus2.db"; version="3.13.0"; sha256="0i6cfk7ahql4fcgrq0dai9gkjbsahyzd9iv4lqv1ad58fzkmipnx"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu133plus2cdf = derive2 { name="hgu133plus2cdf"; version="2.18.0"; sha256="03n9vmclv2ri6n88lsz8yzgsrz33vfclj468jv01h3is2gq09x99"; depends=[AnnotationDbi]; }; hgu133plus2frmavecs = derive2 { name="hgu133plus2frmavecs"; version="1.5.0"; sha256="1r3g4hqxxm3l054kx33bsl9qkd46mkd4d266pm0jgqih6mv5640c"; depends=[]; }; hgu133plus2probe = derive2 { name="hgu133plus2probe"; version="2.18.0"; sha256="1xdg6x6iv9xi0vdlfl4c65zvqs2946yd2bhr9nqhhyqp6h8ghsdc"; depends=[AnnotationDbi]; }; hgu219_db = derive2 { name="hgu219.db"; version="3.2.3"; sha256="1yv7wlz49pfjqwg5s9mzr31457imwn8cq97bg4m1ybib7787m134"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu219cdf = derive2 { name="hgu219cdf"; version="2.18.0"; sha256="14kbn7r84hp4vssxl8pfs7zlg34mdm4qf1m2dw7agrixmdblnz0d"; depends=[AnnotationDbi]; }; hgu219probe = derive2 { name="hgu219probe"; version="2.18.0"; sha256="0sy5q95yppyg8bvwc6prznqzl01xrbl0ic22rj2s8wwsrppsm3m5"; depends=[AnnotationDbi]; }; - hgu95a_db = derive2 { name="hgu95a.db"; version="3.2.3"; sha256="11zahda5frpfr5dqz5p635ki0pzd0h4k7rs7x9q5480794kfnyzc"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95a_db = derive2 { name="hgu95a.db"; version="3.13.0"; sha256="1krmnl5kqfvb4jvrqy72x0s8z7rha96d5nwcbnarpflf12k4hrha"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95acdf = derive2 { name="hgu95acdf"; version="2.18.0"; sha256="1mxac5vd0vzn3k8357lf0j1476q3b7nx6nr54n6j84qi2nx1wknr"; depends=[AnnotationDbi]; }; hgu95aprobe = derive2 { name="hgu95aprobe"; version="2.18.0"; sha256="0sig3g5qmigv7vgcr3rpkn2cmcn2ljp0arhilni7yqsnzqn1dbma"; depends=[AnnotationDbi]; }; hgu95av2 = derive2 { name="hgu95av2"; version="2.2.0"; sha256="181bady90v89yx2gzwahhcl63aiypcx33pkfnjxkyq45qgb18bqi"; depends=[]; }; - hgu95av2_db = derive2 { name="hgu95av2.db"; version="3.2.3"; sha256="12aiyg11pciwmlakn25k3rm0kskl0z8jv5brp8pshs6yfcsh4sn5"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95av2_db = derive2 { name="hgu95av2.db"; version="3.13.0"; sha256="1zk3mb9p8z2xabqr6y9jdiwidjzkgn22jlqyqg1bq0iahmj2ywpz"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95av2cdf = derive2 { name="hgu95av2cdf"; version="2.18.0"; sha256="1zp1y5awnkprkmk01rmn881y50bslfi8s33i8bws39am5xma0jfl"; depends=[AnnotationDbi]; }; hgu95av2probe = derive2 { name="hgu95av2probe"; version="2.18.0"; sha256="0hv0asd44b69h3n87j5ffi9i87w12iad74754wzxgfxihb0yn58g"; depends=[AnnotationDbi]; }; - hgu95b_db = derive2 { name="hgu95b.db"; version="3.2.3"; sha256="1ywjaxazqhij6g3qx1pad5w2xkjsm8gxxhhhlxvkjm8py4a3cacd"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95b_db = derive2 { name="hgu95b.db"; version="3.13.0"; sha256="0gsbs45wfrxisld9vjgw99ksz9nz2v4pjj6dhns4fwx6w0kyqhgv"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95bcdf = derive2 { name="hgu95bcdf"; version="2.18.0"; sha256="10inx0p0155ii4464la0amww91ynyqqh59zyl1lfhnvkl38k6ylj"; depends=[AnnotationDbi]; }; hgu95bprobe = derive2 { name="hgu95bprobe"; version="2.18.0"; sha256="1y8i2cn0zh2jkyi9j8giv5i4dag2c7jd5zyaza72nsyj4qhgmccg"; depends=[AnnotationDbi]; }; - hgu95c_db = derive2 { name="hgu95c.db"; version="3.2.3"; sha256="15qp585208sssg21awccfgs5w13w5h108fgin43sva92v4j7jckv"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95c_db = derive2 { name="hgu95c.db"; version="3.13.0"; sha256="1f2mln8dkhvy58h26wlc6nzbkg0npz3x7v5x7p2w16km2mxkl76b"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95ccdf = derive2 { name="hgu95ccdf"; version="2.18.0"; sha256="1mai2l81mwg3irncvddlcbcx24nvfk0gcx4h1r3mfg47smx1n3rd"; depends=[AnnotationDbi]; }; hgu95cprobe = derive2 { name="hgu95cprobe"; version="2.18.0"; sha256="0glbyjk0mfllfzwfj5hszmy4pwd5ghkb1lrzh215zzxyvnyb47fd"; depends=[AnnotationDbi]; }; - hgu95d_db = derive2 { name="hgu95d.db"; version="3.2.3"; sha256="0df03f5lhrrzcjfq3cv6746ay9yxdyd2zp5p6lnms6pb8mvbmix0"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95d_db = derive2 { name="hgu95d.db"; version="3.13.0"; sha256="0p7l3kpkp5jfszkmijb79qjrvxp7qy14dng4rf796nbhiljj4kh6"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95dcdf = derive2 { name="hgu95dcdf"; version="2.18.0"; sha256="0s60ibk6qsfqibhns2kidglvxkigia31yzr49b03kcazmwm4xqc0"; depends=[AnnotationDbi]; }; hgu95dprobe = derive2 { name="hgu95dprobe"; version="2.18.0"; sha256="0mlj28c82b21010rhj2pzpmv2wf3fis4dwsi7q7292bza2sxxi6g"; depends=[AnnotationDbi]; }; - hgu95e_db = derive2 { name="hgu95e.db"; version="3.2.3"; sha256="1crxr6pa23sd3f8p5yf86p325nh4krdlwsiz7fpxml3i7a7ggsab"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hgu95e_db = derive2 { name="hgu95e.db"; version="3.13.0"; sha256="1p616vniy6rp7zswmq31yffcg8y2b8q39cfwr70243k4nsib86yz"; depends=[AnnotationDbi org_Hs_eg_db]; }; hgu95ecdf = derive2 { name="hgu95ecdf"; version="2.18.0"; sha256="02y97vbhxn3c31q1i2z5l6jv51z8bk8p7vp1kb2y8rkmsw171brv"; depends=[AnnotationDbi]; }; hgu95eprobe = derive2 { name="hgu95eprobe"; version="2.18.0"; sha256="1daflz4s99xb0v91ckb96bzjqmgm334xsngz18l2bd6r8nkxhgzb"; depends=[AnnotationDbi]; }; hguDKFZ31_db = derive2 { name="hguDKFZ31.db"; version="3.2.3"; sha256="1pm0w9jdppd4xx9civh88b15nzyqv6rs7d8yljv6yf5sspxl8var"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -470,51 +476,51 @@ in with self; { hguqiagenv3_db = derive2 { name="hguqiagenv3.db"; version="3.2.3"; sha256="1ylji60m2zb8ialbl5wdrxy425sriq17z3bg8ikvc5b5gjsw6l7w"; depends=[AnnotationDbi org_Hs_eg_db]; }; hi16cod_db = derive2 { name="hi16cod.db"; version="3.4.0"; sha256="0ydi0jljx8igzrqaspr9yywv43h2zimm9fk7xc55nm6mnp5jl7kl"; depends=[AnnotationDbi org_Hs_eg_db]; }; hivprtplus2cdf = derive2 { name="hivprtplus2cdf"; version="2.18.0"; sha256="1jv4qzajikz7x4vq87wzn7hf6hx9r4c2gkjhfp93kqzwzddmigf4"; depends=[AnnotationDbi]; }; - hom_At_inp_db = derive2 { name="hom.At.inp.db"; version="3.1.3"; sha256="1mb5qa01w773rz8jnpalpxb4bzk0143pxm9za1np5lbfzgw7gqrz"; depends=[AnnotationDbi]; }; - hom_Ce_inp_db = derive2 { name="hom.Ce.inp.db"; version="3.1.3"; sha256="1nqgb8b27rx7avnq42fqmcs1pi3dvbmf93z797sgsrcj8gpm69r7"; depends=[AnnotationDbi]; }; - hom_Dm_inp_db = derive2 { name="hom.Dm.inp.db"; version="3.1.3"; sha256="0af9nvs8x1rc30lx2b3099n42waxylchhpzv4a3xgsrrs6q84z5m"; depends=[AnnotationDbi]; }; - hom_Dr_inp_db = derive2 { name="hom.Dr.inp.db"; version="3.1.3"; sha256="1qvnqfdlw5ikhpmihmwi8a8nwmsrgbp8rymrnaxi5xqj9rqlm7qd"; depends=[AnnotationDbi]; }; - hom_Hs_inp_db = derive2 { name="hom.Hs.inp.db"; version="3.1.3"; sha256="11k8wi40m3ppwbjak7b7yv7flr274fxpx7c8b50l1zxm01dppydz"; depends=[AnnotationDbi]; }; - hom_Mm_inp_db = derive2 { name="hom.Mm.inp.db"; version="3.1.3"; sha256="0kdgyzriyg4r19dbcvwvjcd0ziyf1l2ny8sdka7v9lnaga6pq4kn"; depends=[AnnotationDbi]; }; - hom_Rn_inp_db = derive2 { name="hom.Rn.inp.db"; version="3.1.3"; sha256="00cdcfvncqw1ldq7pr2bymy5zhmxclv7xgi0kvkhhw0i263619yc"; depends=[AnnotationDbi]; }; - hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.3"; sha256="1v97yb19a1rl7n81q852snwrgf8spjwas74chnv87r6h355yg1n4"; depends=[AnnotationDbi]; }; hpAnnot = derive2 { name="hpAnnot"; version="1.0.1"; sha256="16isg9byqc9ghipg7626mrijcs0bngz6n6hxz3m616v21cjyingj"; depends=[]; }; hs25kresogen_db = derive2 { name="hs25kresogen.db"; version="2.5.0"; sha256="1yp25ifm3bwzkzm8vimlxw5slini7drhvmh5ggh0z80sfrjyndyf"; depends=[AnnotationDbi org_Hs_eg_db]; }; hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; }; - hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.7.0"; sha256="12m58w0av2b806w75df7spg72d0v7mr7vlhsgdc9h221r0g06vgx"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.7.0"; sha256="1aipxv8c6dwhhhxp0r75j79k038qk4jkmxcdzqiph3k0ylpikmb8"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.2.3"; sha256="0sgi7pbkndcpl775qn36rdlsm4j6ip2lfk0cmkh8zqryrj3yq6hh"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.8.0"; sha256="00pqpqkjmkma9blbzhbmj98h18g46h75q2r2d2li7jhgns7b0pc3"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hta20transcriptcluster_db = derive2 { name="hta20transcriptcluster.db"; version="8.8.0"; sha256="0bx90ypbmvxs0gli4466alyr6vxlnq59wi0jqcqh8afl62whls3h"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133a_db = derive2 { name="hthgu133a.db"; version="3.13.0"; sha256="1har3d5d92lpryaqfbwbpiwrlw31kbh4h6z0f7qpgcjijipl13i1"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133acdf = derive2 { name="hthgu133acdf"; version="2.18.0"; sha256="1a5b421lx0nxy3mrrxjxifwjpnv289c5q2a89xhnkwlcfhqlzqrp"; depends=[AnnotationDbi]; }; hthgu133afrmavecs = derive2 { name="hthgu133afrmavecs"; version="1.3.0"; sha256="0466xgi67r5rpp7cs06ib0cr6vvx8d881g5l96b8sh9948pbn4ss"; depends=[]; }; hthgu133aprobe = derive2 { name="hthgu133aprobe"; version="2.18.0"; sha256="0fanrxa21h961zsgzjrv4mzv8psd3h9sjxrzr126ca8qfqghvkc3"; depends=[AnnotationDbi]; }; - hthgu133b_db = derive2 { name="hthgu133b.db"; version="3.2.3"; sha256="1iypcyzsiqria9svkiggjprscvriihp78rk6rwb9p2n58ij31axh"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133b_db = derive2 { name="hthgu133b.db"; version="3.13.0"; sha256="0c2ad1zkcl07sxg8i0bfvnmmsff01g2p818jdd6ia5j4zznsdprd"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133bcdf = derive2 { name="hthgu133bcdf"; version="2.18.0"; sha256="0v12g1xsmycxhapzl6i5m7jq683k05y9yaq1asxvwls0viph6dv0"; depends=[AnnotationDbi]; }; hthgu133bprobe = derive2 { name="hthgu133bprobe"; version="2.18.0"; sha256="1cqv6zwdxgc27x1h6y6lqzdysx40bbiy1ywcxky4yc611l1lxbv5"; depends=[AnnotationDbi]; }; + hthgu133plusa_db = derive2 { name="hthgu133plusa.db"; version="3.13.0"; sha256="0jym9djj7mm0smgk1sibkvf0xch06hlhpyqmwji24hl7b9flb7vd"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133plusb_db = derive2 { name="hthgu133plusb.db"; version="3.13.0"; sha256="0hkfsdjpzbki8jc16bhvqspyg9dzi89shs14lz67d0id504iirrm"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hthgu133pluspm_db = derive2 { name="hthgu133pluspm.db"; version="3.13.0"; sha256="1g11zfvh7l8qmgdpsdbvbn83zqz37g4fiz5yllqa26jpr23a708z"; depends=[AnnotationDbi org_Hs_eg_db]; }; hthgu133pluspmcdf = derive2 { name="hthgu133pluspmcdf"; version="2.18.0"; sha256="0bslylkmgrq9v1giz87kcikmxbs8yawpylxi0s1n6q4rcc2yg61y"; depends=[AnnotationDbi]; }; hthgu133pluspmprobe = derive2 { name="hthgu133pluspmprobe"; version="2.18.0"; sha256="0ifgrw6b5cr4fj88n4r0skzw6vj4c88bjlahjbik4jfi738qwqp7"; depends=[AnnotationDbi]; }; + htmg430a_db = derive2 { name="htmg430a.db"; version="3.13.0"; sha256="0lsaplzk1myhsdsagsbql4q95yhli3myhhczlzn415pqvx7ykmnj"; depends=[AnnotationDbi org_Mm_eg_db]; }; htmg430acdf = derive2 { name="htmg430acdf"; version="2.18.0"; sha256="1m854lnr82gyx8hbbd5h66s46jh41s7mp1ymjm9fh32jw2pak1i9"; depends=[AnnotationDbi]; }; htmg430aprobe = derive2 { name="htmg430aprobe"; version="2.18.0"; sha256="1alhk7h7a8d49plgaxw95nffwga51asrgwzf4zj52al8brymays8"; depends=[AnnotationDbi]; }; + htmg430b_db = derive2 { name="htmg430b.db"; version="3.13.0"; sha256="1iyvqnw3aqjnik3jmw7cn83czyny832xh3jfvgffmi305rydk5i5"; depends=[AnnotationDbi org_Mm_eg_db]; }; htmg430bcdf = derive2 { name="htmg430bcdf"; version="2.18.0"; sha256="1a0r50z47sb8dyq0x43nibh3whq1gi3nggphybwmrd70nr2y09zh"; depends=[AnnotationDbi]; }; htmg430bprobe = derive2 { name="htmg430bprobe"; version="2.18.0"; sha256="1qaw0213fvpn222hnpbm6hgi2cc69sv6bl72y3h85f50sl4rf8i9"; depends=[AnnotationDbi]; }; + htmg430pm_db = derive2 { name="htmg430pm.db"; version="3.13.0"; sha256="0q1dczr4kcq15v63r4mbap5cxc79l5k76rggh28g623dp215l0cx"; depends=[AnnotationDbi org_Mm_eg_db]; }; htmg430pmcdf = derive2 { name="htmg430pmcdf"; version="2.18.0"; sha256="1ayd1xarlwh7jm3dmaq9j49z4fi2qsrz48jy37xfg9q1wwawvwyw"; depends=[AnnotationDbi]; }; htmg430pmprobe = derive2 { name="htmg430pmprobe"; version="2.18.0"; sha256="02cg12fnn3nbgra7f2lwabi750ws943372p5xc78bjxf9ypql4i5"; depends=[AnnotationDbi]; }; + htrat230pm_db = derive2 { name="htrat230pm.db"; version="3.13.0"; sha256="17v7irq01lxb1gl16mx2syyqvan10fjzsl4712l47khiscyi8jxk"; depends=[AnnotationDbi org_Rn_eg_db]; }; htrat230pmcdf = derive2 { name="htrat230pmcdf"; version="2.18.0"; sha256="0b0gwa32as2l5m951y01dk8i16yl995221dg7ycq97kq4jb5dmdx"; depends=[AnnotationDbi]; }; htrat230pmprobe = derive2 { name="htrat230pmprobe"; version="2.18.0"; sha256="0xpyj6c8j4icx25yk570b4gnfqz8zrsp8wlsw8424xvkviz0wv4y"; depends=[AnnotationDbi]; }; + htratfocus_db = derive2 { name="htratfocus.db"; version="3.13.0"; sha256="0b7qfdp9mdqgphs7j3vh1xbyw2zkw8and9q4mmj2yd2kdkm23r79"; depends=[AnnotationDbi org_Rn_eg_db]; }; htratfocuscdf = derive2 { name="htratfocuscdf"; version="2.18.0"; sha256="0jqn7y17sjn2cg8lidsbyzwpjygjs553gaw72g6v2kxj7j0fhfx9"; depends=[AnnotationDbi]; }; htratfocusprobe = derive2 { name="htratfocusprobe"; version="2.18.0"; sha256="1yxpb9pq4gbmq8s6szlbnc70ngqgi5gwqxx3far673gm5czdlfzi"; depends=[AnnotationDbi]; }; - hu35ksuba_db = derive2 { name="hu35ksuba.db"; version="3.2.3"; sha256="0cb7dki9j1j8q1d43b3943wnsja2y23dqfqdza3flc7wvrgiflds"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksuba_db = derive2 { name="hu35ksuba.db"; version="3.13.0"; sha256="0j2g9c7pvp5dl81rhfpafc1rfx5x4q8yh8r4zcwskmwcxr5ij6c3"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubacdf = derive2 { name="hu35ksubacdf"; version="2.18.0"; sha256="1aw41anp99r0m0c54yibvh3nzswi5wnqv9z7dwi5396sd5sniy81"; depends=[AnnotationDbi]; }; hu35ksubaprobe = derive2 { name="hu35ksubaprobe"; version="2.18.0"; sha256="0dnsch3wdcgffbg1ypnnmsxlrclk9wji11skcs1gih2f7wi4pk05"; depends=[AnnotationDbi]; }; - hu35ksubb_db = derive2 { name="hu35ksubb.db"; version="3.2.3"; sha256="1h8vry8ydlzlg1f7n3viwhlgaid1c2a9kkip9qhnvnszw1zc5xjq"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubb_db = derive2 { name="hu35ksubb.db"; version="3.13.0"; sha256="0qzgfjwfch58hslm7agz5jv2abga8xj74yk6pm5xn0z6xv7ivagw"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubbcdf = derive2 { name="hu35ksubbcdf"; version="2.18.0"; sha256="0anzhbn7ad5yv3qd4vwxaag809yb9saqwx6575iwc9ha5w8hwv2m"; depends=[AnnotationDbi]; }; hu35ksubbprobe = derive2 { name="hu35ksubbprobe"; version="2.18.0"; sha256="0wml8g7nizljjfxq6xbbld3b2lsl1p8rzdmdqg5h81ncg7xhxy7c"; depends=[AnnotationDbi]; }; - hu35ksubc_db = derive2 { name="hu35ksubc.db"; version="3.2.3"; sha256="1hq2p8lall1yzm061f8arykgg3a2x31rn5hfkhwzxhs0jxdispah"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubc_db = derive2 { name="hu35ksubc.db"; version="3.13.0"; sha256="0srgzxhlcb902qj2pc8bc9yj5gw2brip35dhrq66cqmw3k1npp6n"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubccdf = derive2 { name="hu35ksubccdf"; version="2.18.0"; sha256="0fycaw7sngcj50qh8vw594g7i0fw9nmfh1lw72bc3i8jd5y08npi"; depends=[AnnotationDbi]; }; hu35ksubcprobe = derive2 { name="hu35ksubcprobe"; version="2.18.0"; sha256="1s22447qznyrlwpa98wric7xv2aj1qchd5wgq1zgwhg3gcj9lvmb"; depends=[AnnotationDbi]; }; - hu35ksubd_db = derive2 { name="hu35ksubd.db"; version="3.2.3"; sha256="0jp5mpvg0amxkbxla2p81a3zvdamzypgplf6dh246ak3wl9pdxai"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu35ksubd_db = derive2 { name="hu35ksubd.db"; version="3.13.0"; sha256="0bqhhh8wirh0crkqfd0vgrlphbwyxswa55r9jxc3s294f8r1achb"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu35ksubdcdf = derive2 { name="hu35ksubdcdf"; version="2.18.0"; sha256="1ws1mfgi1bndlwhr049bssj6cmd819klp1vwnqppklggs081y22v"; depends=[AnnotationDbi]; }; hu35ksubdprobe = derive2 { name="hu35ksubdprobe"; version="2.18.0"; sha256="1vivxdpg6wn29jwfnw7brcqav1xbr62llqk13dgj10x0gvjmv26w"; depends=[AnnotationDbi]; }; - hu6800_db = derive2 { name="hu6800.db"; version="3.2.3"; sha256="05v13rllfzjg2p35r21d58qxvcxg37ywpvr4ng23bvkrr0qrbx64"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hu6800_db = derive2 { name="hu6800.db"; version="3.13.0"; sha256="0pha36khlag2bawj917wayc2h9n7gkw1hlk54rxsi2w02riq1rwh"; depends=[AnnotationDbi org_Hs_eg_db]; }; hu6800cdf = derive2 { name="hu6800cdf"; version="2.18.0"; sha256="1anddmc7j8x79nrglzmyzdvpwhy8aq6b87hqh7gr40g3d6hxjg06"; depends=[AnnotationDbi]; }; hu6800probe = derive2 { name="hu6800probe"; version="2.18.0"; sha256="1fnkwifpzv0rkb9f5b789f2r5vvz9riwiip5wmyanw2gzdyc2vr0"; depends=[AnnotationDbi]; }; hu6800subacdf = derive2 { name="hu6800subacdf"; version="2.18.0"; sha256="0ckywgdz9n9xz162jw6phj3qwdkiwjb4ya86a3imgb71k3w181wz"; depends=[AnnotationDbi]; }; @@ -522,20 +528,20 @@ in with self; { hu6800subccdf = derive2 { name="hu6800subccdf"; version="2.18.0"; sha256="1xir2k62whqf39g7g5rm646nz6hxq83nldrrc3cyzch85723a55p"; depends=[AnnotationDbi]; }; hu6800subdcdf = derive2 { name="hu6800subdcdf"; version="2.18.0"; sha256="1caiyyna5ffnnx85h9f62h2fwd42wwi187g9igspcy8mn2hakpfw"; depends=[AnnotationDbi]; }; huex_1_0_st_v2frmavecs = derive2 { name="huex.1.0.st.v2frmavecs"; version="1.1.0"; sha256="0fnadflyg615v7w071jilg42w8w5fvnac7rm0wg33klvzx9c9knx"; depends=[]; }; - huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.7.0"; sha256="14m5rkn9nksn84dlcl29wpahxsxhaswkcnc75mbsfagk5fh2qybj"; depends=[AnnotationDbi org_Hs_eg_db]; }; - huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.7.0"; sha256="1xdsrx34625ad6sjkq166i8xlmwdwhsisi8dbjj6zkazg4mbxhd0"; depends=[AnnotationDbi org_Hs_eg_db]; }; + huex10stprobeset_db = derive2 { name="huex10stprobeset.db"; version="8.8.0"; sha256="084g7h58n4nhj3hhzxw05sgzwm06gmg20r4qk7qdh5na5cw0klif"; depends=[AnnotationDbi org_Hs_eg_db]; }; + huex10sttranscriptcluster_db = derive2 { name="huex10sttranscriptcluster.db"; version="8.8.0"; sha256="0pgns280jb77f0hajwqdbwhb78jd9cgi4d2sbk3dlva1iqnyr120"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene_1_0_st_v1frmavecs = derive2 { name="hugene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="0jwk5mm37fil3h9h1hrc4bm3sxfdzywbmsqm1blvrvb5q6jgl50a"; depends=[]; }; - hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.7.0"; sha256="170fdxmhbi6k115gbmvsmmq6hphbmj7yw23ycsjr9v963pwjk0ml"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.7.0"; sha256="11wr9d6bp7yf66hdfx3vnp88brwkxwbxvfdnwyyffdpcaa92c6s3"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene10stprobeset_db = derive2 { name="hugene10stprobeset.db"; version="8.8.0"; sha256="05nbdvskilay0b7vp6pdqapkm5mzpw49zvzbbgab1kg93rbyrj2d"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene10sttranscriptcluster_db = derive2 { name="hugene10sttranscriptcluster.db"; version="8.8.0"; sha256="13cv5038w8akkv5i3bh7fazym9h5x73fcm8l2jc2z4mgkk84skx0"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene10stv1cdf = derive2 { name="hugene10stv1cdf"; version="2.18.0"; sha256="1drsclrcf344z4m61qxd1a1lg2qrd2h7s3y6kk7xcy76s2mqjx2f"; depends=[AnnotationDbi]; }; hugene10stv1probe = derive2 { name="hugene10stv1probe"; version="2.18.0"; sha256="1cn6hdw1mj0i4f0syvx8g1r02bbki994y3s9hrdps3kvcbaw6brd"; depends=[AnnotationDbi]; }; - hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.7.0"; sha256="0nnq0mm04qlzfdslmwhjdww76h2zww4bdqfvs53580qzxnsbw2nl"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.7.0"; sha256="11m9nc1l4rm8mwsnkiak7wdh6593q5x982k7iva4id8qrafykddx"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.7.0"; sha256="047jc40r5z13xwxi1g64xvv8jkdx4k2xn53fqc87nm0qrcz4h1rm"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; }; - hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.12.0"; sha256="1szqvcns639cw5l727bhla2blz36x0i6xkdzw3dl5nwm0p2qiy59"; depends=[AnnotationDbi]; }; + hugene11stprobeset_db = derive2 { name="hugene11stprobeset.db"; version="8.8.0"; sha256="0ijf4i6ag1dmndzkw5mny1x1fmxr6imqw5nz1rrvqwk46q60nsg7"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene11sttranscriptcluster_db = derive2 { name="hugene11sttranscriptcluster.db"; version="8.8.0"; sha256="0z26491y3fyqvgmhsd6lv1c360ym44fiar1wgffrq3s17zs67xwl"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene20stprobeset_db = derive2 { name="hugene20stprobeset.db"; version="8.8.0"; sha256="1g9frzx2m2q6b12f9af0hpb5hsjgiw1gy81w6vbsnbc41dw94kgr"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.8.0"; sha256="00fjhz7gac0rssn3kplag68vfx7gimjrm4mc7z516bs013rppgsz"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.8.0"; sha256="0s4zl9lv5w3fkb9axhz9siliz73brwarw8a7cam1p9b2kmdrdqs0"; depends=[AnnotationDbi org_Hs_eg_db]; }; + hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.8.0"; sha256="1g7yfva96vhkdvcvsjwsj7sy8q6kczd5rmcwrwjc73v9qi4ywgal"; depends=[AnnotationDbi org_Hs_eg_db]; }; + human_db0 = derive2 { name="human.db0"; version="3.13.0"; sha256="1zibqmiy0irw10lr4jlfs5yxsrkngzbp1q9jqd3n5xrzn4p3lxxz"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -573,26 +579,26 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.12.0"; sha256="1jbxvm3v8phyhqywm5plx0sjdgd0cn47fbsqxgmpmzyav8kilanz"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.13.0"; sha256="0g4accix6yw1naf8sabqdp07yjmql0rqnjljw56kgq279hbc2vkp"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; - metaboliteIDmapping = derive2 { name="metaboliteIDmapping"; version="0.99.8"; sha256="0aywrh84a0qcgrjc4zp7j73xdb8fhgxkmsly0qnl2fwarmzzvlkj"; depends=[AnnotationHub]; }; - mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; + metaboliteIDmapping = derive2 { name="metaboliteIDmapping"; version="1.0.0"; sha256="0nflpvla3wn8i2gaja5wwjkxk0jich95f5ws3rnhh2a6rx3xi3ql"; depends=[AnnotationHub]; }; + mgu74a_db = derive2 { name="mgu74a.db"; version="3.13.0"; sha256="1xksybvhfyclxfbabm6haxy0z4izb29qlxd36s3llr3x839wa3kv"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74acdf = derive2 { name="mgu74acdf"; version="2.18.0"; sha256="187k8y1dnnyw926h090gmkk1081sa91fn113lysll3460dqn3ylg"; depends=[AnnotationDbi]; }; mgu74aprobe = derive2 { name="mgu74aprobe"; version="2.18.0"; sha256="0813s2w5s9ahaqn91mkwzfckclv5jdphq17j2qwyzd4xqyxrmsbi"; depends=[AnnotationDbi]; }; - mgu74av2_db = derive2 { name="mgu74av2.db"; version="3.2.3"; sha256="0680qygyrpr15yhs7r3670xl3a8v4jy1qxfqfyxnpp7h8z3kj6jd"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74av2_db = derive2 { name="mgu74av2.db"; version="3.13.0"; sha256="0mnnzqhqswwbh140mcwsy5bz0l7affzznhkby5jvvmj9mq7pd15d"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74av2cdf = derive2 { name="mgu74av2cdf"; version="2.18.0"; sha256="1cw5q8vkmd80g0dxv38qdki39h255bssf27yf0lf0jig9ra5w34n"; depends=[AnnotationDbi]; }; mgu74av2probe = derive2 { name="mgu74av2probe"; version="2.18.0"; sha256="02wf1xymaxd3hfyrbwxfw12klzf5c28md0h45rf41vzia0mkvr2z"; depends=[AnnotationDbi]; }; - mgu74b_db = derive2 { name="mgu74b.db"; version="3.2.3"; sha256="0z98k0f9ycha48jb56lda25rnjlayz7z6jr8icqabhp5sbh95kgh"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74b_db = derive2 { name="mgu74b.db"; version="3.13.0"; sha256="0h8riyk7816ydqhlah3lnlqqzpv6xca3flyzp889kh7j5r9d4792"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74bcdf = derive2 { name="mgu74bcdf"; version="2.18.0"; sha256="0sivgn6srmak7k6p8sj382lsanc34xj5b6182ggnp872y8v6zx5b"; depends=[AnnotationDbi]; }; mgu74bprobe = derive2 { name="mgu74bprobe"; version="2.18.0"; sha256="0igrdbp2hmn550rcfvrscmvykbpm9sbnfa29walv1v57jy6wl7fl"; depends=[AnnotationDbi]; }; - mgu74bv2_db = derive2 { name="mgu74bv2.db"; version="3.2.3"; sha256="0pzn86xmfv8yigk5fi1lf4zpg8a1bsqnm4x6jv6pasivs5lmpyya"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74bv2_db = derive2 { name="mgu74bv2.db"; version="3.13.0"; sha256="1r35rhh11q8s1d9mva4qky8sjh04hpk1ziavx77b5mw6aza1ckh4"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74bv2cdf = derive2 { name="mgu74bv2cdf"; version="2.18.0"; sha256="05w0dh194lncda9qdkmg52znjrnlnjc15fzplw147nyablq5m109"; depends=[AnnotationDbi]; }; mgu74bv2probe = derive2 { name="mgu74bv2probe"; version="2.18.0"; sha256="1kn4549s0kj0jpg7yx4lkc8gvxdfm7p21b6yy52ymhfgbv431sl6"; depends=[AnnotationDbi]; }; - mgu74c_db = derive2 { name="mgu74c.db"; version="3.2.3"; sha256="10ba6lz5f2c3mqajrak0yl2c76lswx267jgmdhq3d3322cfd6n2y"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74c_db = derive2 { name="mgu74c.db"; version="3.13.0"; sha256="1s09n64m46qmsl0drlr383rb20gvq62xzqg3l8jk1mja2mpl41ji"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74ccdf = derive2 { name="mgu74ccdf"; version="2.18.0"; sha256="01dbsxmv7r1r2n348gcdpkxqmciqyrf3s0handp3hl33s6pd8xbj"; depends=[AnnotationDbi]; }; mgu74cprobe = derive2 { name="mgu74cprobe"; version="2.18.0"; sha256="0ib5iyyp6mms5cszarczs82y2779d3cssz7hih1wm0vddbby40km"; depends=[AnnotationDbi]; }; - mgu74cv2_db = derive2 { name="mgu74cv2.db"; version="3.2.3"; sha256="131vj9z1hdhk86mgbay9rldw5czfpr7ag3fh58anrhdijkcyshcq"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mgu74cv2_db = derive2 { name="mgu74cv2.db"; version="3.13.0"; sha256="072brqii2ya2ppqbp71r61j6xh2syfhnfgnh3452dyjf2xc48klr"; depends=[AnnotationDbi org_Mm_eg_db]; }; mgu74cv2cdf = derive2 { name="mgu74cv2cdf"; version="2.18.0"; sha256="18k1kahfwix3cs6kh2aml2mi39l3vjr526ajksljjk46n0bsf1r2"; depends=[AnnotationDbi]; }; mgu74cv2probe = derive2 { name="mgu74cv2probe"; version="2.18.0"; sha256="0rx2cigsi4bnm48vl0bbfh6k3k3cs8nv0x7k7j9vq5z9dniyzqf6"; depends=[AnnotationDbi]; }; mguatlas5k_db = derive2 { name="mguatlas5k.db"; version="3.2.3"; sha256="08lw02r9wpc06pq82934dlfsrjjsaqchrsyghc8pgk6iqq1c3f9r"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -609,49 +615,49 @@ in with self; { mirna10probe = derive2 { name="mirna10probe"; version="2.18.0"; sha256="0f6jfzmj9h4g60lnkdi65grl3ncn19qnrwcxsdhqgiw3ll19cbj7"; depends=[AnnotationDbi]; }; mirna20cdf = derive2 { name="mirna20cdf"; version="2.18.0"; sha256="05yvi7jibj8fiak7z03gjv07xagpda3gy19namyy4iiq3w7ya2fj"; depends=[AnnotationDbi]; }; mm24kresogen_db = derive2 { name="mm24kresogen.db"; version="2.5.0"; sha256="0kf9cilhfpfl9cws1b08ic11fnqscdvbja4m16sm4xjyfd2kskfp"; depends=[AnnotationDbi org_Mm_eg_db]; }; - moe430a_db = derive2 { name="moe430a.db"; version="3.2.3"; sha256="1j9ss80ndy4z3r7cszdkxsadhwj3avxrfp198kg156gsylcskpjn"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moe430a_db = derive2 { name="moe430a.db"; version="3.13.0"; sha256="1qc9gcirhmmwj9c4wfcj4f6j5dldf5s1z3nz3w0c95ywmy60sb43"; depends=[AnnotationDbi org_Mm_eg_db]; }; moe430acdf = derive2 { name="moe430acdf"; version="2.18.0"; sha256="0n4dc2racw68nmfz6arl7f0yh9f3mlkvilsl694zrxw2ysbq1d70"; depends=[AnnotationDbi]; }; moe430aprobe = derive2 { name="moe430aprobe"; version="2.18.0"; sha256="1paiwgjzlq4c04wy8fpnnxj7n5asiw6z2mz0rjrifja9lgyilq50"; depends=[AnnotationDbi]; }; - moe430b_db = derive2 { name="moe430b.db"; version="3.2.3"; sha256="0hb6pa07j5hdirpprcm9vdszbh5bkgf38gyp3g0gqvlc32nklv58"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moe430b_db = derive2 { name="moe430b.db"; version="3.13.0"; sha256="06hycpzsavrgy196d5vx1y3xqqr1w4x40byqvfzxnd5cah26yqa2"; depends=[AnnotationDbi org_Mm_eg_db]; }; moe430bcdf = derive2 { name="moe430bcdf"; version="2.18.0"; sha256="0yl5pkqj37188k2yvvsqhnhm2vx523r11sry976bwzcadlicfhvb"; depends=[AnnotationDbi]; }; moe430bprobe = derive2 { name="moe430bprobe"; version="2.18.0"; sha256="1nziw3pj4picz0aazblpqkbw82wq3vdajh9i78yfvlz1bwb2vpfi"; depends=[AnnotationDbi]; }; - moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.7.0"; sha256="18cgynzjvfwj65v06b0fmxk1b13jlpd7ljaif9hp74hk6hs6gha9"; depends=[AnnotationDbi org_Mm_eg_db]; }; - moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.7.0"; sha256="1nmswvrbh9awp2bk2lbklasng9m74d12yqhxy502wnlc8s18h482"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moex10stprobeset_db = derive2 { name="moex10stprobeset.db"; version="8.8.0"; sha256="1a4jparn4l9v89y1g1xq7w4z1qqz7s2y6c4fjr7vbs8kfk43d3rd"; depends=[AnnotationDbi org_Mm_eg_db]; }; + moex10sttranscriptcluster_db = derive2 { name="moex10sttranscriptcluster.db"; version="8.8.0"; sha256="05x687d8gv8yh8rwqfz962ij9rk6k4vzf0bn868zn2j7cykh129d"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene_1_0_st_v1frmavecs = derive2 { name="mogene.1.0.st.v1frmavecs"; version="1.1.0"; sha256="00lyakg7dhsm3jkh011mfq1vy439mds64zpm6fgyq592x3k9w2ah"; depends=[]; }; - mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.7.0"; sha256="1yxl29fpp37h2w3sq2v9lmiks4m9ip9hlmasisxmqd5cvs2wnpmj"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.7.0"; sha256="1k96334hvb17kxfvgiwih3pp2474fdcck9yv3h9jaf2mbbzg2q6z"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene10stprobeset_db = derive2 { name="mogene10stprobeset.db"; version="8.8.0"; sha256="0hqgazgiq28y9hn86zdviv1zv9x3mkkgvh05x0d9nxlhhzxyxj9m"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene10sttranscriptcluster_db = derive2 { name="mogene10sttranscriptcluster.db"; version="8.8.0"; sha256="1l9k0vj6p9q5rj2hgw9bdcpmbcslvqaks1jm3bxb2m7h4fazsncd"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene10stv1cdf = derive2 { name="mogene10stv1cdf"; version="2.18.0"; sha256="1zhq08zsghck39ly7ymcjanzgw3xy1hqw435hwcrrlipv6i4lbmj"; depends=[AnnotationDbi]; }; mogene10stv1probe = derive2 { name="mogene10stv1probe"; version="2.18.0"; sha256="1qjnsf6cv23gnqdpcy1xqxy807y91fnaiyh95hg99v932pvika6a"; depends=[AnnotationDbi]; }; - mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.7.0"; sha256="02lfkn65r4ylmjz1gy9qm63ia3javj601vm2yw06vpn9r0mkw74v"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.7.0"; sha256="09fw9fsk0nqmyinhfjf8aqkfix7m7kjnf27xq85x4zf1vgbw2kl9"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.7.0"; sha256="0a56rxqrv1vyykv8nmnq6682s3sxzwyrcjr29h585zy5w0gnvygp"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.12.0"; sha256="0lyah05kdgx5sf2hn6p6ac8b922qg1lf5m13rpixvv6362cn4wk3"; depends=[AnnotationDbi]; }; - mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene11stprobeset_db = derive2 { name="mogene11stprobeset.db"; version="8.8.0"; sha256="0wxli72widbakvcvhqc0md7ys0c36gmc047p9n9d8z3vs3g1fhvs"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene11sttranscriptcluster_db = derive2 { name="mogene11sttranscriptcluster.db"; version="8.8.0"; sha256="0yj71cs8qzv8pbricaljwpqz3fi98mianyxk4bd1fi6faiwnj0xv"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene20stprobeset_db = derive2 { name="mogene20stprobeset.db"; version="8.8.0"; sha256="0v16la20n39m6gsy51w61df2rhndzivszasswrc1mm465ksmhgng"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.8.0"; sha256="1bpzpba9aifc7w6qbrh6rnc636k6z1r9gz03sxvc3aa3977p9xag"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.8.0"; sha256="172bhzqqw5hz76bw8vqwx2qpw4f6rwbcm6savmkxmmhzb2nq60z5"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.8.0"; sha256="02g2n5nkxi9lqw9h7sbkblk99zd57lkrldqb1fmi9zww59qwagrv"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.13.0"; sha256="0k6a7mq2dxi8r6rxafdr1nxjlmiisfhi3g1qp7zv9isjiqpgjrld"; depends=[AnnotationDbi]; }; + mouse4302_db = derive2 { name="mouse4302.db"; version="3.13.0"; sha256="0rf22kfj6y96ap0gcwq3mnpv6fj0yax37gf51sfi0wkmp95k7rcs"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; mouse4302probe = derive2 { name="mouse4302probe"; version="2.18.0"; sha256="11mn9j98m3xfk5sn9cb2r92zckm6acplc66c5xn44nazf29pf9n1"; depends=[AnnotationDbi]; }; - mouse430a2_db = derive2 { name="mouse430a2.db"; version="3.2.3"; sha256="15ikbwb4sv1nlc1is6zx959wamha0v7k21gdkmfjarjq3g0ydng8"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mouse430a2_db = derive2 { name="mouse430a2.db"; version="3.13.0"; sha256="1wxy9p9xmph3bimrz6fi9qyhf737alpqmb9ayyr5xk1fvj71c511"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse430a2cdf = derive2 { name="mouse430a2cdf"; version="2.18.0"; sha256="0530znylp4xqld8kak84d6lnc8r62p413d4kkn4j99kmmvx3l9rn"; depends=[AnnotationDbi]; }; mouse430a2frmavecs = derive2 { name="mouse430a2frmavecs"; version="1.3.0"; sha256="0bb9fqz4kkw78dw9mbkn1pp6wp7lmyqpcg8gdjg9j9aichbqbnh8"; depends=[]; }; mouse430a2probe = derive2 { name="mouse430a2probe"; version="2.18.0"; sha256="1f7a6mvcpv57h7kfj1qzkcwh7mdl2w9z6ysmrgan9037rd0652sz"; depends=[AnnotationDbi]; }; mouseCHRLOC = derive2 { name="mouseCHRLOC"; version="2.1.6"; sha256="0xylgnz43xmjnqdwv7pn034wfs61va21lvcpn9igdik2s42ykpp2"; depends=[]; }; mpedbarray_db = derive2 { name="mpedbarray.db"; version="3.2.3"; sha256="04pwchivzb19awnnqr9an0nl49rgdva58ip1fkgbavp3vlirxv4i"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.7.0"; sha256="1bszj4wx7x8x4vdy1np755nx4m94hqwx43mg3ymbjb1hwfjv2cdr"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.7.0"; sha256="1vsv943xwn7y1ghw4bcyyywl4m4y0gsckdxkfyd8lg36b2gq08q9"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.2.3"; sha256="188ld7awcgrbqxkwqyr98739x4ihmcawv3lv2ybrc0khqifylzj3"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mta10probeset_db = derive2 { name="mta10probeset.db"; version="8.8.0"; sha256="1kscmw99qsl34dwhl3izvqhyga65lymgv9fx81h9abq9x2dhr7im"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mta10transcriptcluster_db = derive2 { name="mta10transcriptcluster.db"; version="8.8.0"; sha256="1hk862b1r023l3h04n5qqqd5fmpvz4l4xypb9lvc40nxr8h6sw2a"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu11ksuba_db = derive2 { name="mu11ksuba.db"; version="3.13.0"; sha256="06sfscqw82sjf5q2cd60bi2jclf2j3xn37555zwm6l602piqyqs2"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksubacdf = derive2 { name="mu11ksubacdf"; version="2.18.0"; sha256="09xm3ah3zlssclblx663rlwrnmx3niabd5nf7zf7krhbpgcwhyim"; depends=[AnnotationDbi]; }; mu11ksubaprobe = derive2 { name="mu11ksubaprobe"; version="2.18.0"; sha256="1p3kc06h83ivh06a8qqcbpgbsbdfp9nnwvqfxr6d1gdn15qcp96k"; depends=[AnnotationDbi]; }; - mu11ksubb_db = derive2 { name="mu11ksubb.db"; version="3.2.3"; sha256="1ld2nbxxaz0vnq2gj1sv0qbgcrjg9959885y3l2wciszrs5nx3r2"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu11ksubb_db = derive2 { name="mu11ksubb.db"; version="3.13.0"; sha256="0z6lbi437rvamwb6185f1brhayd70fw6dh6ga3ln2sinvbpkdh4w"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu11ksubbcdf = derive2 { name="mu11ksubbcdf"; version="2.18.0"; sha256="1dajsq041pg3g9c5j3sd0w6gypqpdva91rb4a7ni990nk45mg23k"; depends=[AnnotationDbi]; }; mu11ksubbprobe = derive2 { name="mu11ksubbprobe"; version="2.18.0"; sha256="139kbrlxlw0r4z2iyy4qqcc70sb6nmsn0h7v33k5j6r52qz4hjxh"; depends=[AnnotationDbi]; }; - mu19ksuba_db = derive2 { name="mu19ksuba.db"; version="3.2.3"; sha256="1vivbv7ng58n1r2g5w5xrwml9jvfhb4v6qp9n4hi9y77526hm6sq"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksuba_db = derive2 { name="mu19ksuba.db"; version="3.13.0"; sha256="1js9zrbbzdrsl73qa1dvfqcrcaxsmlrj7ymyjiadzcg3g014z3lv"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubacdf = derive2 { name="mu19ksubacdf"; version="2.18.0"; sha256="0c1nhvnnn8v07m6rci2cml6i86rs77b1xnw7jmyndfl458vjlp09"; depends=[AnnotationDbi]; }; - mu19ksubb_db = derive2 { name="mu19ksubb.db"; version="3.2.3"; sha256="1p5x8gl17nhynwm96ah20rpbj21n8l856bivy5slyn795vzy15sw"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksubb_db = derive2 { name="mu19ksubb.db"; version="3.13.0"; sha256="1i7xl84mv8s93hqh9baa4sp5jhwmvhsm37379yjps1q5yyydci4i"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubbcdf = derive2 { name="mu19ksubbcdf"; version="2.18.0"; sha256="1waizab2dn74y8b1w27l1yg29gi00v16fij1jm2yhik5cnjhhhk4"; depends=[AnnotationDbi]; }; - mu19ksubc_db = derive2 { name="mu19ksubc.db"; version="3.2.3"; sha256="087ib49c61q2yrpqdhkgzcjmrv88wdwzzws67anx8bia97ck9zhz"; depends=[AnnotationDbi org_Mm_eg_db]; }; + mu19ksubc_db = derive2 { name="mu19ksubc.db"; version="3.13.0"; sha256="19ixhs75lsrykdqzb2cn1dz2f45nzcmpbp340ipp78maa89z3axr"; depends=[AnnotationDbi org_Mm_eg_db]; }; mu19ksubccdf = derive2 { name="mu19ksubccdf"; version="2.18.0"; sha256="063v3fn06p1znwrdxn26lz7qz9sfzk10hgabimxw3rz5x0580d4l"; depends=[AnnotationDbi]; }; mu6500subacdf = derive2 { name="mu6500subacdf"; version="2.18.0"; sha256="15y7x1jgzzc366dapa5gy44m98zpn8mfghjxh12k3k9ryd59lxn9"; depends=[AnnotationDbi]; }; mu6500subbcdf = derive2 { name="mu6500subbcdf"; version="2.18.0"; sha256="0a0w5yldgjvj8pyw7ygn685pj95qdfm34c0sqvgqf7w7g5wm4jvk"; depends=[AnnotationDbi]; }; @@ -665,26 +671,26 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.12.0"; sha256="1cc7iy9wsrcvz94p70gvkacwmzw42g2nxpwyzlcb3f3cc5a8kzb2"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.12.0"; sha256="0ggv68p5ly1pbxai62mlajkgyxh8wc5as5xikm03s7sqj99fl9zj"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.12.0"; sha256="1brx8m6cpmkkaf3f1rmxb3payln342cmkhbp4z8mx6n82jjnvx0l"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.12.0"; sha256="0nq4g94jp1pg15lrl430iq7545lgxp2c3af03cq77rx2b5pfn0im"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.12.0"; sha256="0w18zxd9pbwcsmz1ilddywhd225mv3975imq0kihc84hzlca9gh0"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.12.0"; sha256="1mys35qrvjff1xnr7xrgf9rmpamdia9p54p6y73bhxs7q9x6sl7c"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.12.0"; sha256="0kay0vsbvymrva7d11qq5rwi67lfmprrpi1zrzrgdx24xnv9fdkl"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.12.0"; sha256="0c4p6jr83k0gm6pvn760yr8xf33wggrfcr6fg7a42a96bcf817gs"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.12.0"; sha256="1rali3pahng83lakv80bp0vi5gisykbc4y77mx1ap7hiv9vnyaiz"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.12.0"; sha256="11240bskl0cmkrr4238gmkbb0kc85dmb5sv5f3mlg77a4qhj4wm4"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.12.0"; sha256="1fs9680g03w9r3jjcn3nlbzn2aqh6fiapnamql18cypc8x9sp8a8"; depends=[AnnotationDbi]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.12.0"; sha256="013c69b7h2vcv6h3jp0a26p9dkr1wj9599bh34xiyfns1z242lvl"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.12.0"; sha256="053cg979pwkvas8sip0a5q6rrbkzh5d9wv4420r3mv4sdg7q3kfc"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.13.0"; sha256="08s5sf4gxf3dc0j7zjjmjvz87yh0z9a438mbdgki9q8snbi72mp8"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.13.0"; sha256="0r0izn5cf0mikbzls37j1wavznpm23mhb316ph468hf8z76l4blm"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.13.0"; sha256="0pwvwyfah8fhvaxdc8zkp3lp1v4mchhzr84r3hb0jx97icdvhafi"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.13.0"; sha256="1m8dd1jqf6a6rnxs3hyd88njc96j7dhxf7zbrp8sfq3k2vpjssp5"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.13.0"; sha256="1bzxl0frgjkprbcc65lzdivjpq0kygxyyxxafmf381lrib9x5hgz"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.13.0"; sha256="1vzzgqjry4390x0mvcpxaawbngdbixbmyf6jrncibqmk43hvnxbi"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.13.0"; sha256="0swhmwscnw1g0g5ilrgwqjyy01lis97i52scyb40d9nzjq5dp38p"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.13.0"; sha256="1wfshrqq0n0avplgzq3gzamzfxsf7s0cccdcmnx14ygp1mfqmpfs"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.13.0"; sha256="0ddi8m766cfvmchv5g4mbsbnvdb8g65mh7xy0q48r7q5ifx076v1"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.13.0"; sha256="0nggkh2w1ms97ss193khbdyrv1lljfpwikadgcch4c3jhpcikhvl"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.13.0"; sha256="0bwn29i2w6mqhk9qyig8vfl372psy50b1sz8n6ddy0hzmnr1s6ym"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.13.0"; sha256="1jzz36pdq8xlj1mr4h4jw0mvd8gp30wzqz1jjbmp848gvy4xzz4l"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.13.0"; sha256="0f638jwj2b89lplm0m50zldh1rp7hpypcjq73lcrwff89l6g1vyb"; depends=[AnnotationDbi]; }; org_Mxanthus_db = derive2 { name="org.Mxanthus.db"; version="1.0.27"; sha256="1jqwsdjz1d8fwqhq26lavb2kq739ddlb8khsh4b096vhnwv3dxg5"; depends=[AnnotationDbi AnnotationHub BiocFileCache BiocStyle]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.12.0"; sha256="0vka0m5x2g6cw2p0zkk602zic8gzqsb23p622d0v8kwb5zpmb7c5"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.12.0"; sha256="1zvlnqyywkp07nkryzlmykbzdisnbafy0i9ws9slq8dhjhacgxj1"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.12.0"; sha256="1ia6bbfkcl4f9hxrckbpq46r5i3l9zf8bvq4xggm82gwc5bn9pab"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.12.0"; sha256="1vflhhgg59gdnidcbn8vkia87impcz28vv98i17821rhkw1i8fss"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.12.0"; sha256="04rvpx63s45dx5k067q5fhrqs34s4gcb3xv0h0ixrg76ns1nrmbl"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.12.0"; sha256="0chr3agh0q79m7ang9vdf87p60k1kxcjamnwxf9gf2avrawlp05m"; depends=[AnnotationDbi]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.13.0"; sha256="0nn5zc2vvzrwz49jvf4x14lc54ch3d9ykchzfz28jnxlmq2bx68v"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.13.0"; sha256="0297yvg4l7vxqrmj18vyifsp7zaz7wbcwsbafqqjagm05lj6aylp"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.13.0"; sha256="1z8x27885jg8grbbsmwn99ar95iw8i3rxj2byimc1754gvsq50vl"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.13.0"; sha256="05wd3wawx1gjm7gx1zz1bdib6bdnhy7aafki1x7zi0yihvy1jsa0"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.13.0"; sha256="0m4srfldbrcdyl0yrzh7j0m4ni7akbj839j0b26xkflaj2pikr8x"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.13.0"; sha256="0ryhzf7sdknvcjkwzlb33vbwlwbip5jhggn2ap1psg2fcfbzqn5k"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -862,76 +868,76 @@ in with self; { phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.7.1"; sha256="0dka39rvx4d3wbcjypcgvc19s6cnxkkfywa4irv23kpibq1sjyv0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons30way_UCSC_hg38 = derive2 { name="phastCons30way.UCSC.hg38"; version="3.11.1"; sha256="0g7mn3wa9l9hpks828n82rads1ls5mjgh6dfgk3iw1nrl0ylws4v"; depends=[AnnotationHub GenomicScores]; }; phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.7.1"; sha256="105isdrb3nsy30wd8yy9vrrv8b7c8izc11xqqixg6rcriacd0rl0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.12.0"; sha256="14v6sjpgk2qxkp5mkq6wbdb1wv2hv8xmmhsrbsrnhf3iflqrq41p"; depends=[AnnotationDbi]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.13.0"; sha256="1vj6h8nk0kxryjfgi2d5a708pn9q3r9y7dbqw893i0204ak0w0h5"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; poplarprobe = derive2 { name="poplarprobe"; version="2.18.0"; sha256="1pi6lhkk3lr49qs0yfpxm80nm1zqn4syykydymah2208r6qnkgv2"; depends=[AnnotationDbi]; }; - porcine_db = derive2 { name="porcine.db"; version="3.2.3"; sha256="0xp86g0sp4jj2shjzvwg64fpp381lkjm0p5y3zwalznnrq6xl3hk"; depends=[AnnotationDbi org_Ss_eg_db]; }; + porcine_db = derive2 { name="porcine.db"; version="3.13.0"; sha256="1yg0nixly4akpx11fzv93jzfbrs05qck2qg9a0a76zwlnp9mmak3"; depends=[AnnotationDbi org_Ss_eg_db]; }; porcinecdf = derive2 { name="porcinecdf"; version="2.18.0"; sha256="1ywbgh5nk3bba0mhmbbmvry0j9m9vk7qmsacl5nx1cjd7kp68csv"; depends=[AnnotationDbi]; }; porcineprobe = derive2 { name="porcineprobe"; version="2.18.0"; sha256="16q865wjrfcm5ffqwjdk762yq1ixa93jlvfg7xbhsvajvvw5dxdy"; depends=[AnnotationDbi]; }; primeviewcdf = derive2 { name="primeviewcdf"; version="2.18.0"; sha256="0qj3l2iabpl2d79pr258cbqar4hdpjkbwf829bnwrmabkaq92z48"; depends=[AnnotationDbi]; }; primeviewprobe = derive2 { name="primeviewprobe"; version="2.18.0"; sha256="0kw04789ihxnw874qcdj5ypwj6npya2v3p893ahjwhys5wrivmqg"; depends=[AnnotationDbi]; }; r10kcod_db = derive2 { name="r10kcod.db"; version="3.4.0"; sha256="073b5fb8dcqp5iq3h6p6250l91z6bzg72nzl7qva3jin33v96nmm"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rae230a_db = derive2 { name="rae230a.db"; version="3.2.3"; sha256="1b2vj2dsihnj1h867z9biyxb3ai3lv47bhadim1z1gcyizkbll4x"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rae230a_db = derive2 { name="rae230a.db"; version="3.13.0"; sha256="13mfwmx8zc519argmjd0bpgfr29bgbs9r2jln1idc9r51smqr9zy"; depends=[AnnotationDbi org_Rn_eg_db]; }; rae230acdf = derive2 { name="rae230acdf"; version="2.18.0"; sha256="1f62gw18mhmrm4sqc3kazsm5zd4m73f99xzxbakqhvr5sbdqh28k"; depends=[AnnotationDbi]; }; rae230aprobe = derive2 { name="rae230aprobe"; version="2.18.0"; sha256="0gkpaa53znqsmi3366wfmqz6q3d1cq3ymag09gkpdmssrp1rh9qh"; depends=[AnnotationDbi]; }; - rae230b_db = derive2 { name="rae230b.db"; version="3.2.3"; sha256="0rjs9lijabhxfrs6m9qri7a1c10zm1mxqx7bbip366cw069f5dx4"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rae230b_db = derive2 { name="rae230b.db"; version="3.13.0"; sha256="19xlds6z8d86kylxbgck7r9nfj58jjfblwx1npzfp5bw44jlhwzm"; depends=[AnnotationDbi org_Rn_eg_db]; }; rae230bcdf = derive2 { name="rae230bcdf"; version="2.18.0"; sha256="1j2i49cp042nk3rkf8q6gxcnwd5cihz1nyg8r6yndkja51r41pi8"; depends=[AnnotationDbi]; }; rae230bprobe = derive2 { name="rae230bprobe"; version="2.18.0"; sha256="1smqs93fks4rd5g9kk7cacnpsnj4rjr0d6fl2i01mdiihfi3csny"; depends=[AnnotationDbi]; }; - raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.7.0"; sha256="1i5f6ygg3jq6msqacd1npnvcb3pp5a1c95na7rdd3818h27pj4vf"; depends=[AnnotationDbi org_Rn_eg_db]; }; - raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.7.0"; sha256="18y7fkpg34d18xczc5xz5hcigfkd4fxzlhd1cvfadxjhjyaj5fhk"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.7.0"; sha256="0ignrscm098xpnrp60lhnakgh4rwypzk6a5nh7miacxbs2mcy1lr"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.7.0"; sha256="12w77ajis8ll25knmjm8cvnxjlgpj6n7j66lmww21y7dvg33gwlr"; depends=[AnnotationDbi org_Rn_eg_db]; }; + raex10stprobeset_db = derive2 { name="raex10stprobeset.db"; version="8.8.0"; sha256="0r8qj5ibgn1sp1yw94aylql6r88g1v5l7z0h8ji8gg34676gqpf3"; depends=[AnnotationDbi org_Rn_eg_db]; }; + raex10sttranscriptcluster_db = derive2 { name="raex10sttranscriptcluster.db"; version="8.8.0"; sha256="1wlbvd2dxv5qchwgcmdwy23z4xnzs42sd6sawc88sqfcyl2gp6r8"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene10stprobeset_db = derive2 { name="ragene10stprobeset.db"; version="8.8.0"; sha256="14j8ld6zq1wy2dpl1wkpmp6q3qhxakj8a8wh4qplp53m4xk5cfb8"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene10sttranscriptcluster_db = derive2 { name="ragene10sttranscriptcluster.db"; version="8.8.0"; sha256="1iv8hzzic2wj9hmzqcf0kayb4rhhqks23r9l0dddd3zwlbqaqc9y"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene10stv1cdf = derive2 { name="ragene10stv1cdf"; version="2.18.0"; sha256="0fm2yj6nn3v1wiscjb53hm4ylh5cgxvs7qgc9sbsbpv7agr0bzng"; depends=[AnnotationDbi]; }; ragene10stv1probe = derive2 { name="ragene10stv1probe"; version="2.18.0"; sha256="0cb3a908hixcakl41ay4yyfm9r97ln8gjidn4rs1hr7qaplfj1mh"; depends=[AnnotationDbi]; }; - ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.7.0"; sha256="0cc6cch0r2dlk689gsphcsf5ikbgyczslmq7r20q1cvgqxbzj6kp"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.7.0"; sha256="195dx0splkvdwqn4h6nvmm3zd0sv3vhcjz1bp1qxgi6d5iakvkry"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.7.0"; sha256="1p8qiqwxpkq2784ixzdd9pq38nrb4x8qwfmk5alr225br4vv0k2q"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.12.0"; sha256="0p9jnh0k379x6agqphi9lwmznvv8nv0k1s1qpnfh4d801pdcnk0l"; depends=[AnnotationDbi]; }; - rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene11stprobeset_db = derive2 { name="ragene11stprobeset.db"; version="8.8.0"; sha256="1xx7l05g6hgqfljdlap624f5ikrak4wfnzsybbi1rlrfwcrz1z2g"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene11sttranscriptcluster_db = derive2 { name="ragene11sttranscriptcluster.db"; version="8.8.0"; sha256="1y5377l8vnnrvixs9lqzx7dmxi1x7qqd94q3mfi2b2bnmf0wj0cd"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene20stprobeset_db = derive2 { name="ragene20stprobeset.db"; version="8.8.0"; sha256="0c3cj4k2k1xssb2zzkdc39a031l2gf284cpdyvvjlx766nb57xxz"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.8.0"; sha256="1bi4wy0sbhsyavxwshxvf3iqmyz26q7y2vqp1h3rjshsjdmhfd0h"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.8.0"; sha256="1m0hd0nlav9dhqzvs5drl8q3llx2wjxdfvb24fmjnba4h769ns7k"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.8.0"; sha256="14hp03pizq7kprwk26s9w6s27zzbs2kk50qhjbiwic1xbrl0dp8a"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.13.0"; sha256="14qmpa103ypqc9bz2aq8lb5nynf4kgdj6qzyf467kc41jj377c60"; depends=[AnnotationDbi]; }; + rat2302_db = derive2 { name="rat2302.db"; version="3.13.0"; sha256="1k2qm1rpq3xkj52m3n629r4qcqi2azdssb2i5shj9jdaqkmr43qc"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; rat2302frmavecs = derive2 { name="rat2302frmavecs"; version="0.99.11"; sha256="0qy5hf86lrkn20yg6d46kcw9fjc0qhsbzbyavaj1v2zl34xvr1ii"; depends=[affy frma]; }; rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; }; ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.74.0"; sha256="05ip70gik4f5r5bs36mkdlzcrxgn39inp7430j4kcqqa5j4svv8z"; depends=[AnnotationDbi]; }; - rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; + reactome_db = derive2 { name="reactome.db"; version="1.76.0"; sha256="1bj4nbaasb5bqdf5f090rqa43g4a9bidjq0mla9b8gm4r3m17xvl"; depends=[AnnotationDbi]; }; + rgu34a_db = derive2 { name="rgu34a.db"; version="3.13.0"; sha256="1nl28gia0zh8xkfv8llxiysxk1k1gm6cs2wvl0n1xqhnr0rhla76"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; - rgu34b_db = derive2 { name="rgu34b.db"; version="3.2.3"; sha256="1dpk9dyicqc8d4fypqcq2z4plq6iabd0g8f3bfvkp9qip3bi9np8"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgu34b_db = derive2 { name="rgu34b.db"; version="3.13.0"; sha256="0mig7x9ydkgrhqyj0kz3sq0s5mfjv5arppzmqmm2r4mk2dx1fidy"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34bcdf = derive2 { name="rgu34bcdf"; version="2.18.0"; sha256="1iw0jydcjizkxybpbimcc9m8rjl4xm3jx431nvr28h14948jhrg3"; depends=[AnnotationDbi]; }; rgu34bprobe = derive2 { name="rgu34bprobe"; version="2.18.0"; sha256="097q0994fbn05b6iprncynpka9zm9ayh1pmjya44lj4ahfmflgiq"; depends=[AnnotationDbi]; }; - rgu34c_db = derive2 { name="rgu34c.db"; version="3.2.3"; sha256="0bc4b799hxxp108rkfr12c0v49vkfgq5p9hxk48p5a5b9h42g6s8"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rgu34c_db = derive2 { name="rgu34c.db"; version="3.13.0"; sha256="0jfg2qrwzh7inyif7affwp3dwph9axnbsdqba4j97pjiavwc6232"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34ccdf = derive2 { name="rgu34ccdf"; version="2.18.0"; sha256="0v6glasybwg73synvlq6rf3fw4wckavp09waf3g3hya4qzy45r1x"; depends=[AnnotationDbi]; }; rgu34cprobe = derive2 { name="rgu34cprobe"; version="2.18.0"; sha256="00v9hbq5vc6ah4gws196isglicxj1dpzp1a0vv4pkl2ph59hkf1q"; depends=[AnnotationDbi]; }; rguatlas4k_db = derive2 { name="rguatlas4k.db"; version="3.2.3"; sha256="0q8xryvqixqbfqc9lfkmy9zymdlyk76vy4l3a74haj7k1m72nhi2"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.12.0"; sha256="0rcj9xml2rdhyz77iggnimijx4ia0nwf9sm8wzjjlwlkb522gvi3"; depends=[AnnotationDbi]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.13.0"; sha256="1iaw8r8d83l2qgg4w3iarwy8qvlplz8q5bvgk16cws8md69kn10d"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; - ribosomaldatabaseproject11_5MgDb = derive2 { name="ribosomaldatabaseproject11.5MgDb"; version="1.00.0"; sha256="04ppa4k8p54bmkq3jm41h0v4lb5hz95cmnakfzmqfml00ir04mxp"; depends=[metagenomeFeatures]; }; + ribosomaldatabaseproject11_5MgDb = derive2 { name="ribosomaldatabaseproject11.5MgDb"; version="1.00.0"; sha256="04ppa4k8p54bmkq3jm41h0v4lb5hz95cmnakfzmqfml00ir04mxp"; depends=[]; }; ricecdf = derive2 { name="ricecdf"; version="2.18.0"; sha256="07lsw9rklk2rsvbkcj1ci8hg2x68k3qpkx9yw0cmd7rg5fvydgns"; depends=[AnnotationDbi]; }; riceprobe = derive2 { name="riceprobe"; version="2.18.0"; sha256="0w6qvszdmnipn3v2bld46x7my2a9hni0jbxd0y1d6xcrrgs951ra"; depends=[AnnotationDbi]; }; - rnu34_db = derive2 { name="rnu34.db"; version="3.2.3"; sha256="0ahridq75rmjyaivmlhn428wg712zv3003cbzzrajm9w6nibbfgk"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rnu34_db = derive2 { name="rnu34.db"; version="3.13.0"; sha256="155spriq65xpvf1wjw632jsfabzd4lm06l8qqzhs70qqjbnlkln0"; depends=[AnnotationDbi org_Rn_eg_db]; }; rnu34cdf = derive2 { name="rnu34cdf"; version="2.18.0"; sha256="1snb89530zxdbsfs1vgw30b1wdc5sdr1q46bmvz5m9g57gyficr0"; depends=[AnnotationDbi]; }; rnu34probe = derive2 { name="rnu34probe"; version="2.18.0"; sha256="1rzjha1v453fxiwqs2zgwcbrvz6w96biz2jny0hrh5s86d5f6xpb"; depends=[AnnotationDbi]; }; - rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.7.0"; sha256="02hcq8zflfixiqwsjr7bsllcqh3hh910n00hzlqry07mwwxbv356"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.7.0"; sha256="1al9npm4skccr7369gpg0hxsw3nmngsl6z06c27n3ymdavsd2dyj"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rtu34_db = derive2 { name="rtu34.db"; version="3.2.3"; sha256="119l36gbzdi52na2lkjbpb5r2d9pp5rz2zpzfj7isw07an6h8wmh"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rta10probeset_db = derive2 { name="rta10probeset.db"; version="8.8.0"; sha256="1v5d278bs2wv6bq0clihlribg3pzhdbppf635php0207gx7hnx89"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rta10transcriptcluster_db = derive2 { name="rta10transcriptcluster.db"; version="8.8.0"; sha256="101mvy8bwsy235dnvga9hccxwn3hjxvqx2hxypl82i3wk2vrm5dj"; depends=[AnnotationDbi org_Rn_eg_db]; }; + rtu34_db = derive2 { name="rtu34.db"; version="3.13.0"; sha256="0ylny01v73m1v1bghk190i2nnjnymadvmp7s073ir7nyyw8gvzkf"; depends=[AnnotationDbi org_Rn_eg_db]; }; rtu34cdf = derive2 { name="rtu34cdf"; version="2.18.0"; sha256="10f5wnvk820c8brl2qqs7mv6jcn1v6pmz680kvlpyz9s2sz16936"; depends=[AnnotationDbi]; }; rtu34probe = derive2 { name="rtu34probe"; version="2.18.0"; sha256="0mcp9lmc65j3ds73gyak72pkshnx6km0d2cm324yaxlp9bqzfchw"; depends=[AnnotationDbi]; }; rwgcod_db = derive2 { name="rwgcod.db"; version="3.4.0"; sha256="1k0fpnv314lx2jf3mm6xfqa3jx353sp42awxqys9byzhg9zyj2j3"; depends=[AnnotationDbi org_Rn_eg_db]; }; saureuscdf = derive2 { name="saureuscdf"; version="2.18.0"; sha256="0vmm3fy10dzzmaq22ah4fb0k3fs1gdbhnsi8mxz7xgp27dcan29j"; depends=[AnnotationDbi]; }; saureusprobe = derive2 { name="saureusprobe"; version="2.18.0"; sha256="0s5ma3hh7ncsi4dq33r3hwffk85x3gvjbm5cslppbsd0r0bjwkia"; depends=[AnnotationDbi]; }; - silva128_1MgDb = derive2 { name="silva128.1MgDb"; version="1.00.0"; sha256="0pwwxxa55d3919rbczg5iskd03ignimk80m52kfi930b1kdg9qc2"; depends=[metagenomeFeatures]; }; + silva128_1MgDb = derive2 { name="silva128.1MgDb"; version="1.00.0"; sha256="0pwwxxa55d3919rbczg5iskd03ignimk80m52kfi930b1kdg9qc2"; depends=[]; }; soybeancdf = derive2 { name="soybeancdf"; version="2.18.0"; sha256="1dlwxdslm827661z6f4z2hwr7wpwqfzvizhvv63p86ll7l6gs3s8"; depends=[AnnotationDbi]; }; soybeanprobe = derive2 { name="soybeanprobe"; version="2.18.0"; sha256="06dpwqad7q3wyq0bsgpwkw8kx1gq5fy1s1lw632xrvgcid2fsmf8"; depends=[AnnotationDbi]; }; sugarcanecdf = derive2 { name="sugarcanecdf"; version="2.18.0"; sha256="0wghc6wr7iwkql63m3wibjjdcdpqd53z0g5rxdh553sjb0ca2n7z"; depends=[AnnotationDbi]; }; @@ -952,8 +958,8 @@ in with self; { vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.12.0"; sha256="021fck9gd3jy1a15n4x3l59qfvw0xr2dg0v7cwza857nhrbh7y5n"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.12.0"; sha256="0ml6skgvhjr4fssnc0x6rz1z6qg1lnxppw7478g3233cfmw8ymfi"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.13.0"; sha256="15kmk92fd30br04k6ykhn4nqk9p82r825lhgxz10ypqinkmvzc8l"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.13.0"; sha256="0inx722iyilfwwff091xdvnyz8qnlyk8jdzdhil18vrdf71wrlfl"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; @@ -965,16 +971,17 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.12.0"; sha256="0mgyb650gs1bfnlvd115jhj3ypyfmwql5dj864sv9svxcdysc212"; depends=[AnnotationDbi]; }; - yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.13.0"; sha256="1jcpfrbqqc51q05j4pmrrwd7h6nwnmlj7jx7jnd55wdmx9pfjfzr"; depends=[AnnotationDbi]; }; + yeast2_db = derive2 { name="yeast2.db"; version="3.13.0"; sha256="0aqbs3p6f3sc6nyggyk7gvg191b551rwq20009fnk0li50dg1ps6"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; - ygs98_db = derive2 { name="ygs98.db"; version="3.2.3"; sha256="0py1xpqxsfvxk20knn4lj872mxw1ysqk2nvgsbh5l2rh1m2p8rdk"; depends=[AnnotationDbi org_Sc_sgd_db]; }; + ygs98_db = derive2 { name="ygs98.db"; version="3.13.0"; sha256="1mp24vhx0fnjc2hhcsbnrr0ir0s1sn7bkx8j43d9kw7vzqm5xqxd"; depends=[AnnotationDbi org_Sc_sgd_db]; }; ygs98cdf = derive2 { name="ygs98cdf"; version="2.18.0"; sha256="0j04biahbm2l31aayddp0z9rh3jq1ydxf3h8pxr3pvq2vjj1q2mh"; depends=[AnnotationDbi]; }; ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; - zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.12.0"; sha256="1rv3x6h593caw2ml267803qm14nh34dfn301pzznbf6zvd61v6dg"; depends=[AnnotationDbi]; }; + zebrafish_db = derive2 { name="zebrafish.db"; version="3.13.0"; sha256="13a65jxr3r5qjf82h1dr0k9qq20g14canqgqdd11k9gk5h31xhc7"; depends=[AnnotationDbi org_Dr_eg_db]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.13.0"; sha256="0xzrzydc1dzjfx18dgj4vqz2lf9lbz71g967h6bvcf5diwg3765s"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; + } diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index fe8b01caa6b..9077cff658a 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,402 +4,403 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.12"; }; +let derive2 = derive { biocVersion = "3.13"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.20.0"; sha256="1mclg6rgdagrvk76zcqi53b0a5wr8nbwwrmagsji2ncv1zq2mzxj"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.32.0"; sha256="1i96kvk9s99h3a2xmkhhc6qcjp5l63jd5fhj6jv8yxzxbxq83fwq"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.30.0"; sha256="0bs393hfn4zi4ysc1lyjpwp8p1g0gbzsq81rl8g9xf5kxg4b06pw"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.26.0"; sha256="0wpxl3xjncpyj5x7k5sabr8bmgd85j743pk1j8cqwyb0i6nlkkgj"; depends=[]; }; - ASICSdata = derive2 { name="ASICSdata"; version="1.10.0"; sha256="1kmr3b5hr18fjmissbzd2wlcwwdvyhdzjq5lhz0jq77p83qfx00x"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.26.0"; sha256="0rqg698b4kw0g2plspvg1pjkjdckj0b2cvwni6ax97g287z93hf5"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.24.0"; sha256="1ww8q5bbwi605wmiwvhz9fd780f2v48rzk3x0raa9bi9d0xzq8xs"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.28.0"; sha256="0b4f5nprvch8jczd1yrl1n7jsdd2x9ww8jd9p4qiyqyg62qnknc1"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.28.0"; sha256="0czwpiawgxyc8szpc1siik2rysxfmb8ir6byf6wsdq7cqa4gm78y"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.28.0"; sha256="16bqcw986q854gzg5mhkbgwbl6rw237i2b28jsc0skh7jnc2751f"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.30.0"; sha256="0d7y12s8ajy1qdch0d6nb053ja5dhb3l4509qgy5baxy7v09pg08"; depends=[affy]; }; - AneuFinderData = derive2 { name="AneuFinderData"; version="1.18.0"; sha256="02vb3kmza5hv8bc424fdmfif608xvpdb759w8882kac8izpv29ks"; depends=[]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.20.0"; sha256="0qpib69wj91n7h56hrfl2vakp9sjw92s4a7q9y1xfia3hqyfdvkj"; depends=[]; }; - AssessORFData = derive2 { name="AssessORFData"; version="1.8.0"; sha256="05fb1h4wpnncz93ypzazxkwmlvqsr399b6vnz98g11c8x4m25gx4"; depends=[DECIPHER]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.28.0"; sha256="0z6d0q1qhx3hl1ycgsvd2va2p9rmh9w74rwf851yfcvnfbln3gsy"; depends=[beadarray GEOquery limma]; }; - BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.10.0"; sha256="16fkz7gd1pbc7lmbgwxcjdqs64jllqx1vdpkkhcglk027xvwqlf2"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; - CCl4 = derive2 { name="CCl4"; version="1.28.0"; sha256="0zyhfqhj29g1w2l9n7wzr99jxh70p0pj5q7j2akdh5mnprzpq139"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.30.0"; sha256="1ys1mvbhvvqdrp26sd7kd45ffz5jrm84wp3250kcb4s7q9s933m5"; depends=[affy Biobase]; }; - CLLmethylation = derive2 { name="CLLmethylation"; version="1.10.0"; sha256="0xckg0xmbw5k6chf1g5m9hq9iy378fnr5hxcfg558i7q7i3c26nk"; depends=[ExperimentHub SummarizedExperiment]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.26.0"; sha256="0j7rfk7szxhns1q4nccgs9ca5s5h9xbw5fqkz6zyxqpm427hsvrm"; depends=[]; }; - CONFESSdata = derive2 { name="CONFESSdata"; version="1.18.0"; sha256="1hf55gq2y284pna7dvp81713miqjpf5zc9wg3sw0ayw88sfp5h69"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.26.0"; sha256="1993nbdkwwz7a52qpsmzq53x59xwcdbfw8c9qajkwsn61shxg0m0"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.26.0"; sha256="1wpvf9iynk22phpbh9bhk8iyv2sbmz9742ym6vsm3z26f4rdf5k2"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="1.10.0"; sha256="0i1aic3zx7cjxz2as6fq4qblizjn8a04i5r5s16z0nkbm5n7nnhr"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.22.0"; sha256="0lzpq5ga9l8r28g3f54n22ajqzq158f3vddimirbdd06jm3wb1c5"; depends=[Cardinal]; }; - CellMapperData = derive2 { name="CellMapperData"; version="1.16.0"; sha256="09nccxikyqzmbmfl27d1lf8salarx83wgg4w7agacyn666q2zqww"; depends=[CellMapper ExperimentHub]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="2.22.0"; sha256="04dybk5fp3jxwpwvasqrjfdfi4hi8cy6d1hdkmr1iy8r19nksq2d"; depends=[BiocGenerics GenomicRanges]; }; - ChIC_data = derive2 { name="ChIC.data"; version="1.10.0"; sha256="1lapcczii3y06k85bbg119fpwfzwpx1vm6kza13shr2ssj0kgrrq"; depends=[caret]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.28.0"; sha256="0x8v2l15shhd16w42b31458d581qnlnr4n726fr6pbrr8z830zn0"; depends=[bigmemory]; }; - ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.14.0"; sha256="1g2nl3a9cffvvz3xfpp6sn0ppprkpcd9pzz94jf70x70v0973hrl"; depends=[]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.28.0"; sha256="1j9m614739vrc4gflc23pz339g1vvx5lywxq14mcb8m9mb1dskgl"; depends=[affy hexbin limma qvalue statmod]; }; - CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.6.0"; sha256="15n1173vkicw6l64wb1qgn7x24mp1a0vlgmb7ni2496dfs34dd64"; depends=[]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.26.0"; sha256="07dbdmavgs5g53ig71c04pprx66cazqvc40w8r4bzrhdw50jp0ly"; depends=[]; }; - CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.8.0"; sha256="1nwhmx9ccczz3z1h7hr4adrfxhighmk79nm60n0shx1slngvimy0"; depends=[ExperimentHub Rdpack]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.22.0"; sha256="16xylk6izj57vlk8hij3qgw43mnfzcf75191a0g6fqj8xgy4n9wj"; depends=[]; }; - DAPARdata = derive2 { name="DAPARdata"; version="1.20.1"; sha256="01q622qpcwqnsynf1hba49l6si7w81qzn4fsy9q00yjm8388lgpi"; depends=[knitr MSnbase]; }; - DLBCL = derive2 { name="DLBCL"; version="1.30.0"; sha256="1srzynbja9rcdnxc43fl1pzv9gdbx4f37krgwlnbp0312pw13g1i"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="2.8.2"; sha256="0jwzbsl50agn0cyhg0fs292qvsn18v560ihcyq3lxg1jkv33w0k8"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.26.0"; sha256="058f20ny3z951b4f0i99hwxxmrnkci1gimj03ngx72lidj6rc865"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.26.0"; sha256="0r6jn5qgx904dkw7ps4ml30z7w21kal9cja5andgmg12g6wivjf0"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.22.1"; sha256="0r1jcsra199fn5z3hcgqp0abpxxlz3g64j4xljvxz2xqagz26y4f"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.28.0"; sha256="1xgzdxvk845zd7vcck0016698cwq4w17f61agq86y1kpcy7k0gpv"; depends=[EBImage]; }; - DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.0.0"; sha256="1s861xidadihxd0pdzibqnisazyliwdaqab0aszk035h6ixwcpa1"; depends=[AnnotationHub ExperimentHub S4Vectors]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.26.0"; sha256="1z5p79595w6cf9rqangziz4q3c57shn67w5agf0x1d14acwswzzs"; depends=[]; }; - DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.8.0"; sha256="1hp3n6m9ld4sq7jsscpdz7i2cfjp4jqyx6w0lr9y1di6zilgvxfi"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; - DvDdata = derive2 { name="DvDdata"; version="1.26.0"; sha256="1kf0dzwy22b28p44xmn59rnpk2zslz8yi7xghsbkqmc5nxkwgxf3"; depends=[]; }; - EGSEAdata = derive2 { name="EGSEAdata"; version="1.18.0"; sha256="1lma9xpqf4gghh89d43mbnssfqd062rimy5jdyskiaq2xw3xdpm8"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="2.14.0"; sha256="1r9gikga3ywq2w20r2nfcbjz45f2yl8fqvrb1hpn0yzram290b0b"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.28.0"; sha256="1fybmg8cyvxhz1c22xx217ifcdpbjybbghsg18gsap6s7gf5y5f4"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.26.0"; sha256="1byq28015k20bygs0dv4zngf0rzzbskxgv2ykjq977av1a8gsn64"; depends=[]; }; - FIs = derive2 { name="FIs"; version="1.18.0"; sha256="19c921fky1slfqrqial0hz9r73l0m31xa2h2m19h6c17skk68rxc"; depends=[]; }; - FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.0.0"; sha256="1r3zx27ymr7r8k7sizp4y1q33fsqpik837635jhal9cfi4rkl3kq"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.26.0"; sha256="1khw2xd3v4g7piq3ds1g9539p40jzw3p7z6hvmy986s4njvfvhnp"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.26.0"; sha256="1qqqi9zi8rc4mnkvgmlh582wjm6mwbkkiy6475asl0v6v8sf1m7a"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.28.0"; sha256="16nwb63src82whwfazsljd7cp0f5d1afpgsaw6ljnqaaz7palyv2"; depends=[minfi]; }; - FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.8.0"; sha256="0b3hzjak4fmd2v4i7vv5lrvhixd3i9iwns5vvqnxikwlcfw3d1m9"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; - FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.18.0"; sha256="05x7q7yf2sn7jb3mf61r3v40dcksxb2kipb7n304sq4nbbn3dmb4"; depends=[minfi]; }; - FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.6.0"; sha256="1zfm8mdrwafqyp0jk78sq182cdbxasv2kkd3iwpskfdxj4ddmm0y"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; }; - FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.16.0"; sha256="1v9b97cddawzdmby7pdjfgmpppqwafjwdyafpdgx0a7icynjkygs"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.26.0"; sha256="07ywjaf62zvx944685jdj5cn414lywi6yg3g856nym3abh8fi0q1"; depends=[minfi]; }; - GGdata = derive2 { name="GGdata"; version="1.28.0"; sha256="0dkimkjzh46dnrz9kx1d0fbw9xl9il9b4vy7qmbrqnc8jiny0f8b"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.8.0"; sha256="0xn4x01njpmgpm2wyaqak1sa4v4qjksf0lv1jq451ah7nm1snwyk"; depends=[]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="1.10.0"; sha256="1vc9zd53lmk3nsnwsz7ghizps58qlgxpjqjvbi3m4pafjs2h8rm9"; depends=[]; }; - GSE62944 = derive2 { name="GSE62944"; version="1.18.0"; sha256="1n1ja9wi7r66jgragfj49xq2p0a12bcrdrhv6y1bc21c0rjl632r"; depends=[Biobase GEOquery]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.26.0"; sha256="0jcyshq96kqzar48y2ajh0lzn546rbkb7xkf5fazixrrbkyfq904"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.28.0"; sha256="1znjqwxpvaxdq4w04cxcpw387mb1x52kn730a99qsy4fj61m0c83"; depends=[GWASTools]; }; - GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.18.0"; sha256="1jgnnlprcz0s0i1v5ar08w0ngfwf73a2l4d59lsbx7bjciwkwaf9"; depends=[]; }; - HCAData = derive2 { name="HCAData"; version="1.6.0"; sha256="1ck373w9l6cyj8f476b4kfmkh8bvqics69wda3vawcbmfr9iial1"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.30.0"; sha256="0fi7264x4ryqykzjf5ws1azdxdx7aykp5nn570yrwwlqx2hxnl01"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HDCytoData = derive2 { name="HDCytoData"; version="1.10.0"; sha256="1vcnwlh3d8krki689fx1j6g21rlk2cbj2j293dy33bqwpizgy047"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.28.0"; sha256="1sndqf11yn4ci4zan6f62qcx7lqpaahwx3bivjr90qr1rsyfn7x8"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.30.0"; sha256="10863kkmfipg5d1rb35zr48lkfak8kdhxgqy6592ds4hj38q8sl9"; depends=[]; }; - HMP16SData = derive2 { name="HMP16SData"; version="1.10.0"; sha256="0rqnq7vkwm27p5rpvc1594yw2p0ydjxfjd7q0hjk482wl3lnnc74"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; }; - HMP2Data = derive2 { name="HMP2Data"; version="1.4.0"; sha256="02x7a07f7v462r4rj58mjifkwgir5q0lxczjnq0wvnxx46qnbnmv"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.10.0"; sha256="1173wlbghhjkdwwmv2j6938gncr8kr8kxjkmb7sk926kng7iy80a"; depends=[]; }; - HarmanData = derive2 { name="HarmanData"; version="1.18.0"; sha256="1fvjh65s29mdxksmcv5h82vnapv7fqcdaa9ibwxc50wkzig8vpxs"; depends=[]; }; - HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.12.0"; sha256="053rn3nmcgnqfg955ysvikizg1g1kzn66kg7dn2vnwhgnif9r5pc"; depends=[ExperimentHub]; }; - HelloRangesData = derive2 { name="HelloRangesData"; version="1.16.0"; sha256="128hlf2nixphidbgky3qcmfrb4griiglqz4as7yv0ybn85bx07f2"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.10.0"; sha256="0hi2yfsyf298b00992ssxvypafj89gbabn2h4x4i9bq2ddi4rqv5"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.26.0"; sha256="0i5mpfw5nynxraa9c2rzk6fw6mhxr5ybxig6g1fxidhdbwy8ry6m"; depends=[]; }; - HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.2.0"; sha256="0j65ip5wfkihpvbr0qyxk7yvdfd23aynqgvnrj8xnmpxihz2diz1"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.26.0"; sha256="1r82bva4w8gkzj021d14ylnf7pd61mh28vhmmcy1c4l6qd00fmqs"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - HumanAffyData = derive2 { name="HumanAffyData"; version="1.16.0"; sha256="0mbya59yqmq59f9mplgd59v7z7hfjrcp2ki2d8iyn3c7xy0vx368"; depends=[Biobase ExperimentHub]; }; - IHWpaper = derive2 { name="IHWpaper"; version="1.18.0"; sha256="0rlgbfdabw0ixvnw4ahxznln9dmy6j6y2hfpfv2zx1xznawsmng6"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.28.0"; sha256="0rxhv94h735k3ms0zddlawlzafc14gvqcsv9p7ldw0jrfq2dpb88"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.26.0"; sha256="1dkdgkql5lfbzwy01kzg1w79axagi7js2gmdaah3qs8gvc0qk3qk"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.28.0"; sha256="1i5qz0ryspfnd856p62zn6br6n634xkmz8fxl9fvdfrb7xq8vhsd"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.32.0"; sha256="06ih28b8g03nzp9z0nvni710z84ksarlrpcvywrsfkylzfm4xdil"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.26.0"; sha256="05k4x8via56xn7xxc4r669yj575z42faax6alm8nwskxj0jf188c"; depends=[Biostrings]; }; - JASPAR2016 = derive2 { name="JASPAR2016"; version="1.18.0"; sha256="0k3wlj00bbk5hv6f443v362xpd0jf2v51abhbypv6nrlmlmin315"; depends=[]; }; - JctSeqData = derive2 { name="JctSeqData"; version="1.20.0"; sha256="1dz7ac8br6x9mgma922sf6j5689dca1dqylkcqkyvm7m91ivjgij"; depends=[]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.10.0"; sha256="1d1dac9yq61fpyi5f7i16shabccl1x5zhbrh11bnzpwkwydx6nzz"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.28.0"; sha256="1vv3r79f2r7a80ivmqfrfhy2qqjmwibnfy3vdijfpld56wli5ayh"; depends=[Biobase BiocGenerics]; }; - KOdata = derive2 { name="KOdata"; version="1.16.0"; sha256="0y1i3fhhj3mqa813hfslv93iskm4pzbrhb8ld388b6llls80kxa6"; depends=[]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.28.0"; sha256="12z1ak7aijdd0xsra2lg8ny57wsx5hvdaj0ph2gq7nkjzmj4clcq"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.22.0"; sha256="0bh4gz1cna4cq26g1820rndiyg40bkbc3wnpl7sgcahqdg06v5wc"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.26.0"; sha256="1ybccdir9a2p7xvngph2sa408pfdh99s4ssqwm1l1m08vjnj96wc"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.28.0"; sha256="05j9ybc4xs4da6zdc5237ynqrn1dddsr98lplsx9is3nyw40qb54"; depends=[Rsamtools]; }; - M3DExampleData = derive2 { name="M3DExampleData"; version="1.16.0"; sha256="0d07qnhkipwj6psxgl6wmp46jkiv8f20chc9wga405yyqxysk2pr"; depends=[]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.28.0"; sha256="1n7y3663jzrh7g50dp2g5pxgjz7cjjjfwlha3pdpkzgdwv0im59x"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.28.0"; sha256="0h409f2g4m8b67b6id3klx615m12cbg5cv5gfilk4gwmv12jravz"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.28.0"; sha256="1d35dxh090cqfw5ry3hix7c7x5k9mfs4l069hn7m0d7rjy526y39"; depends=[Biobase lumi]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.26.0"; sha256="0p5glf7rs177729wzibbdmaqz9rpkjmgqa4pzrba3mi6qbqy7q4i"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.28.0"; sha256="1crjy0xiqsgkjs1kz57491fnlx00914sbjljqrf9smxzhn0g3rcx"; depends=[]; }; - MIGSAdata = derive2 { name="MIGSAdata"; version="1.14.0"; sha256="104jfsswi1lh7m8nh25rvn8hdsbbraa4i5p1dg87dzihb88jgzcx"; depends=[]; }; - MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.4.0"; sha256="10r6d641yqcn5aw135252fqxx3z8hjckwfd8ry0brx0pxq5xd20g"; depends=[Rsamtools]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.26.0"; sha256="1ajkpgfq0nhi4r7br2qw5v08wwpml2cnm7253m3s8jj2cajxf4fx"; depends=[]; }; - MOFAdata = derive2 { name="MOFAdata"; version="1.6.0"; sha256="0zggk3fq0a7qym61733fy9ks9ybbz6dbkpahzdgv224rxwda4ijh"; depends=[]; }; - MSMB = derive2 { name="MSMB"; version="1.8.0"; sha256="0x8q4ifi684yyylsa5csyz6bzdp82r89a7c5fw5bkgyid9j3k7ba"; depends=[]; }; - MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.12.0"; sha256="137faw7y0118jwyh4inss46gxqh1mmqsk0jk5c3d0gvh8a6jyips"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.10.0"; sha256="0h9zar4nrlbfbggq8ficmqmpzp81cwcsbjcya42bl44a1sfh1nnp"; depends=[]; }; - MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.10.1"; sha256="0918dwvybdcbpy73c8wwdiakzwg60q3rblpn6nc05qh3h0pkma7c"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; - MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.10.0"; sha256="04cbv1sikk0y66sjzfvaahspq7ycbyk82bzd8nx1mbcvm8mvmgi0"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; - MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.10.0"; sha256="1ad3rc51zh59r109p09vlbiwwadpbf35cw3lrciyji32rcvzbs50"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.22.0"; sha256="0vhnynxq3qvhkjqz3ijwacjy1149hn22hhvvyp9lyhkz8zh2lh92"; depends=[MethylAid]; }; - MethylSeqData = derive2 { name="MethylSeqData"; version="1.0.0"; sha256="0l4nlnascxizm6n7fq7f2ynqlvp01ml64s9fynn153zhar4aa5nd"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; }; - MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.4.0"; sha256="0c8vy63ripm2srmz6mac4r24rgcsjvc2qvrm84sll96cn0pxczr5"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.26.0"; sha256="00x01z7rzpx9hapxjj30ijd1l6jjid127y4krsazx58vzkjlv6z4"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="1.10.0"; sha256="0lfln12i2m0yz1mdv427kd8rln8zd361r1ndi3bykvfk5j02k89i"; depends=[]; }; - NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.0.0"; sha256="06r7v0hz76fkv7m3rg1wp08zhdm5ahj0lvx5rhr21jx712a0nmym"; depends=[ExperimentHub]; }; - NestLink = derive2 { name="NestLink"; version="1.6.0"; sha256="1p6c1bpa0d92p6br9wbrjqgxyxjldlk4qw8m84j1h29prkb66dhr"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.28.0"; sha256="06f9gyczci0nj99pagzssaf853j2biq4k75j6vh6h6mg27kbz2p3"; depends=[annotate Biobase hgu133a_db]; }; - OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.8.0"; sha256="0jhcqiqcabrvf4x3vjc58vby01ilw7959b5sjy1w8flpq0m4nvaz"; depends=[MultiAssayExperiment]; }; - OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.12.0"; sha256="0na11zi4dbphvvr0pl4lkaqihyr2bg72cpdrvv1qds236zs4nd0a"; depends=[rJava]; }; - PCHiCdata = derive2 { name="PCHiCdata"; version="1.18.0"; sha256="0g8yicmm4d4c54vgwvsx9k5lfmkkbkjs99vg03x85g9r5h3ifd7f"; depends=[Chicago]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.30.0"; sha256="060mwfg4d7kqiryr7v91ifdvrbpzdfawd73yllgs2bfyknc0x0s7"; depends=[affy annotate Biobase PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.24.0"; sha256="0zbzr86yb10vv7fc5g3pys3cmj6400h1wjwjcdb9pbff05ypn9ig"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.24.0"; sha256="0c9rwr5qxz5zydcfg9q12w45w5jsd3sfyp81cy47xy0jbiss5ni6"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.24.0"; sha256="08rdilnjlp2haawyp5drwas0dy786ny4ljb4z257d31vii1awfz8"; depends=[PWMEnrich]; }; - PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.18.0"; sha256="1gylgs0rvm8hdja8iqp4bhz21b80rnlwz3hfr1z7xlhljzj58r11"; depends=[]; }; - PathNetData = derive2 { name="PathNetData"; version="1.26.0"; sha256="16h9jb86xi0fxg8k935yzyk07z7pl7cgfwv7xg767d27n27j6hgb"; depends=[]; }; - PepsNMRData = derive2 { name="PepsNMRData"; version="1.8.0"; sha256="1jivmg2lqyx60s1hxlzfi5xhbcvxjhx6h2wwdaxi8z7qwbss54zr"; depends=[]; }; - PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.4.0"; sha256="12lvh2a403l4j4jb2jfnivdlb4s8mn7bkdgcxwpq8cm4g1xw03ns"; depends=[Biostrings ExperimentHub]; }; - ProData = derive2 { name="ProData"; version="1.28.0"; sha256="1w9z3vl8b5v4ajhdgk67wyp42yqdnjcgjxd64ngjdnhdyain80pn"; depends=[Biobase]; }; - PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.16.0"; sha256="11pacmb36mql7w38f4y0qpcnxsdbkx3dwl216giic10clnv4gbf4"; depends=[CAMERA LOBSTAHS xcms]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.20.0"; sha256="1kjgv5vjarkpj593ks33z8mggrlzwacqa68gxz99w5snwaa9bck8"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.20.0"; sha256="0hz37vydv5jji4p87ayz7hsk5iq052r910jk2x0rdmic6ikqsyji"; depends=[QDNAseq]; }; - QUBICdata = derive2 { name="QUBICdata"; version="1.18.0"; sha256="1lai9lgvr6wlxrfhhha26xipzgw2zm005b55lss26g07zzln54jv"; depends=[]; }; - RGMQLlib = derive2 { name="RGMQLlib"; version="1.10.0"; sha256="1s8b0d62qrqzkg84dszam7chl3rrdm2lmmyqnv1pil0qy4njb37w"; depends=[]; }; - RITANdata = derive2 { name="RITANdata"; version="1.14.0"; sha256="0lbijw0wrvqdnih6r5rplr1836bz7y3q31h7cmrbhjycd1swz9z0"; depends=[]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.28.0"; sha256="0af45pmkjin798jzg09946kbp7fcgsz2wva9d5bm4f63qlcdjvfc"; depends=[]; }; - RNASeqRData = derive2 { name="RNASeqRData"; version="1.8.0"; sha256="1q049h87cds5c5nkmcrrzlipcllqpcjcagpvaxjr956wqaca64rg"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.28.2"; sha256="01mhm2fgya1nl8syqjya7ymc74kwpffabzhcr4dgzy73x7sy5bcy"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; }; - RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.4.0"; sha256="0hc4jjxn7fll5qsg42lrm8d4jcr2a62c2s9j5ji5y0z0hizwph4x"; depends=[ExperimentHub ExperimentHubData]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.28.0"; sha256="0b0am8x1fns3mrvhbxandp2r5wlcb8fv5z8dhj3wai79mjypz3v4"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="1.10.0"; sha256="1z1dj200qqc9y5swql4azd7h7977p65lnx7sx63xzcrmq7pilm4v"; depends=[BiSeq]; }; - RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.18.0"; sha256="1s9lfynynzdbgm2vdgb3nim1gyb0sgw17r17gjzzz6dd7pj5fkx4"; depends=[RTCGA]; }; - RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.18.0"; sha256="048wrw6s4p24gr9ijj17nzfq4b87vl4m1q7ncis4rc5xza1rfh6w"; depends=[RTCGA]; }; - RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.18.0"; sha256="1gldz4phkrqr2jiy7vbicg7m981i07r0n7nvvb2xqmy65nyby8xs"; depends=[RTCGA]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.20.0"; sha256="10i2w5grvdwcisvalxljfglhfmq9sq3c8c4077fmpn2kzb7f428x"; depends=[RTCGA]; }; - RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.18.0"; sha256="0ilbf8ifk2fzlm9bxlka6vwqaz4fdwn71nd2pzzx2nf7vz0cxrb7"; depends=[RTCGA]; }; - RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.18.0"; sha256="0ngkry4vsimpgkj8iy2l16890kw4dampldwx1jnn7cnrh8961h10"; depends=[RTCGA]; }; - RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.18.0"; sha256="0k52934zrdc2a3g2vsjj75f59m7vdfmlsp66wwf78zv1m45i3sjf"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.20.0"; sha256="0hixibpdslq08848k4085hh5f02fq2mbrabf04ilvmyysw72jdjs"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.20.0"; sha256="19wfizv7n4zsk11zxqk7hx30g6yg68hkskv5ij4cq8lwwmxn6x5k"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.10.0"; sha256="1d6j9zbgjz18di0sbgprsw2i9mwkihhasf28j710v62wrgmqa51i"; depends=[Biobase]; }; - RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.10.0"; sha256="1r4a1pjzldj27mnp72fkh54gzmfhsyig07843zv0n6jja4zf8hch"; depends=[data_table]; }; - ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.4.0"; sha256="10my0a0gk5cb247ffdrgl6ja94apyrv7f31x8h9qhz6hrlcc1w0f"; depends=[edgeR limma ReactomeGSA Seurat]; }; - RegParallel = derive2 { name="RegParallel"; version="1.8.0"; sha256="060srcmdqbxlsi62pq0bswyv6f58wc9kcnwx39isf2z64prvzkj3"; depends=[arm data_table doParallel foreach iterators stringr survival]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.28.1"; sha256="0pnrfp2i2cqv73bgzf391ydnbjfv9yc0a4pb092x5mrhcxabmw7z"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.22.0"; sha256="1aq78hkabpp2075dp97xjiqiyhwpyrxyg5dd3v54w85yagk7jp77"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.22.0"; sha256="0mv6j1s3aih8fy69zhn0ypm8fsrhk0a80ggln25gcdwm5zgjqhkm"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.22.0"; sha256="1s53ay81anij062g1ha55yp4jylrv8csp98s3063cjix42xjncjz"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.22.0"; sha256="0n4pxcy0awcq5mvfqd59djg9p8h7mp7x42qsryh4zrvkc53mk357"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.22.0"; sha256="1bnwfr8z860w1m1xsy1k6jdjwwgpq7b703v0gyxv3gws4lxlyazc"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.22.0"; sha256="1l2rr5dpr88l7ll0dsfwv767jl3lfgd61simng5mjcg8wq08ccdb"; depends=[edgeR]; }; - SBGNview_data = derive2 { name="SBGNview.data"; version="1.4.1"; sha256="168pq5yhdn5cfxvyap1cpby0asblbhk192c6vg0jpvlwxh6djcsx"; depends=[bookdown knitr rmarkdown]; }; - SCATEData = derive2 { name="SCATEData"; version="1.0.0"; sha256="1x8c0w5jf211illrmxhxvm08ms73k0637ky9ws52kayyrbnbz92m"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.22.0"; sha256="1rj84zyn39r0xjksx2v76kmn5jvgs4qnjy4r4dk5i917v5p8f62l"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.36.0"; sha256="1mj741xq2kjlj4cry4pfhcrmqsfby7kks2lw26c418prcmqn2lcz"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.26.0"; sha256="1jima0pkpl4c86gi13kmi9jz7d0v3nsib5844m37942357bqrwgg"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.20.0"; sha256="136inhl5r1r3xyfjg0klkkp0c3gzbp13avjjj9vj1z0cialzg9z9"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.22.0"; sha256="184hgw2g3r1p6jsswz2lcs9kyjbg4yw43wz78w5xfwzq78sf2lzf"; depends=[]; }; - Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.18.0"; sha256="14cnfrq3xnka4xl9fag1avmajcnxw36c1nyk03ciq0bz9hsz9rls"; depends=[]; }; - SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.2.4"; sha256="0qwmasqw2x9ynmsy4a32f6m31rf8p6ibp8i44rg0pd936smkf9kl"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HCAMatrixBrowser HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.28.0"; sha256="03k5f5dmc9afc6i4kw3yrd8d9al0zpr4rninh1zh31nq9misrlww"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.26.0"; sha256="0vs4zgp5lbjffdn38rhpwnrmz1nxiwp7l1f55mbcj4hb9y3v891h"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.32.0"; sha256="0layhz7xnl8n91acflzk4yabp1n70c4lx7dpym2hhqq9w3rq7f52"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.30.0"; sha256="0raxvskb1wpj7hxl2s2gfyaiw1d8978j6z2mbf3nsn0gijxaqby5"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.26.0"; sha256="1ar145kihn1q5s3chs7l82g3rzsz5nr40glsham7ykqfnl2f8b2z"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.26.0"; sha256="152mxaq38w4rrcn5p4wwaich6cy502i2w24p3ral9hhn5pr0mlww"; depends=[]; }; - TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.14.0"; sha256="09hid6vblnmff7p5x0x5wa4svnqh4708560lay58i4zdxj9nkqwr"; depends=[SummarizedExperiment]; }; - TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.10.0"; sha256="1ly0ajjfqmhq7p04lk1lb5vngk7g2hc2l1xi6qqp5k7rjh0qd9cw"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.10.0"; sha256="15rbr5i8hmisq5harwyp0ysaxzs80bv83glangwch3ljxjcg1s1w"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.10.0"; sha256="0k3m6gv37s8f0gzda9kbw6y155pbna3c694a0andw3h5fma40s5y"; depends=[Biobase]; }; - TENxBUSData = derive2 { name="TENxBUSData"; version="1.4.0"; sha256="0j85a48pzy95jghmm28yr7xpsfkkpyq7pa7ighnrlk694z61la2n"; depends=[AnnotationHub BiocGenerics ExperimentHub]; }; - TENxBrainData = derive2 { name="TENxBrainData"; version="1.10.0"; sha256="1xwqagw4zx316mlx1biswrh78va6mcsxqlygybkppcjni3bczx5b"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.8.0"; sha256="1sam5nmpxs57nyxd4g8si43dx908nlfs0c7ymxdhad1da5x3ax7l"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; - TMExplorer = derive2 { name="TMExplorer"; version="1.0.1"; sha256="0dxqjcmfk1h8v08722nczqkkpw90cmdzl7wv579gbxqap4hp1l38"; depends=[Matrix SingleCellExperiment]; }; - TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.8.0"; sha256="1hwh3l5ri3grzjici6kznqzxvhmhzkqb8ia6lgvwk2af7mv12zff"; depends=[ExperimentHub]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.26.0"; sha256="0r5vgc88ipqxmpmhvi58wjcm6m7dbm6paf2r4nj2xbs2czww9r1v"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.28.0"; sha256="031ivpg8jz5hd6gl3rhpimgymm1n4wcad5y9d3nfl8afw8aar3qd"; depends=[]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.20.0"; sha256="13ylpp0dfb12vpcy88gdwf1632yxaqxn5s7j4z4x0phdm0s8brnl"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - VariantToolsData = derive2 { name="VariantToolsData"; version="1.14.0"; sha256="0jnapsbmr4q7kkfm2z09k6srphch6izsv1ywig39j5hyqzv53gc0"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.22.0"; sha256="1cbcqrclz5pvjaydg23z5kcc2shnqvhri8qm4n107gv9bld3772j"; depends=[]; }; - WGSmapp = derive2 { name="WGSmapp"; version="1.2.0"; sha256="02h2n4jbh370rgk3l54aip1v89kvb80p0ml2lzmwwj8sy2c6h8ky"; depends=[GenomicRanges]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.28.0"; sha256="1ml5ksa1sfxcw594h5yv1kk7aycfi85jg0rs3mb3dc5cv6sx1z6l"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - adductData = derive2 { name="adductData"; version="1.6.0"; sha256="1vac40kjdfqbyjcb1if15i0w19bksyr4xv8gp377whpqiny1v8k8"; depends=[AnnotationHub ExperimentHub]; }; - affycompData = derive2 { name="affycompData"; version="1.28.0"; sha256="1rq6m4gkabrvcbvnf1sqx856jyxvggqvk56c3mi56lzw2wy1nqh8"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.38.0"; sha256="1p0pzfzczmsdf2w463wcj1yjcnrw02wj1m54d5hh1fc34fh4w1z3"; depends=[affy]; }; - airway = derive2 { name="airway"; version="1.10.0"; sha256="0gy4j014sgrwbksqwjf9gz1pqi36vvxnhxjmll5srx6qf40f9cqa"; depends=[SummarizedExperiment]; }; - alpineData = derive2 { name="alpineData"; version="1.16.0"; sha256="14b5vzizm9wj1s9pmrp93japwwlpb65ksf49i824g4q90z8qkp9p"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.26.0"; sha256="182p2nkdd3mc66f7lmcsgnhk2qya3hi3hyrr85m2gva14pvxja9y"; depends=[Biobase]; }; - aracne_networks = derive2 { name="aracne.networks"; version="1.16.0"; sha256="0hjzs32xim23ixqvhmii76qa89v88wzq3mq84zpi6q7wdyqbrw85"; depends=[viper]; }; - bcellViper = derive2 { name="bcellViper"; version="1.26.0"; sha256="1mqil6pbmqhj5hjjrai5ing3qnzggddcf6mn2a02d8ri5nnjmhwy"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.28.0"; sha256="0insx6l5xj93yivkamisifib4mn3ifq95zm3l0sxq0phgz8xqjfp"; depends=[beadarray Biobase]; }; - benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.4.0"; sha256="1v9jr9hhgxmqk87a16syqgqjak7vr9jm2js4i82f05mncf0x2hkl"; depends=[ExperimentHub SummarizedExperiment]; }; - beta7 = derive2 { name="beta7"; version="1.28.0"; sha256="1rr2b604h1a524kad21h645aa2ajcmcgf7wsf660ixar06cx6ar7"; depends=[marray]; }; - biotmleData = derive2 { name="biotmleData"; version="1.14.0"; sha256="1cidmip2ra2qi9qmdxddidj9xwhdc42qm8bynffr3nqwj1s95vjd"; depends=[]; }; - biscuiteerData = derive2 { name="biscuiteerData"; version="1.4.0"; sha256="1jl9ilp99b11v7r1f8kxc3qk7xm5i03pwszxyrfn27w7xdq9xp1p"; depends=[AnnotationHub curl ExperimentHub]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.28.0"; sha256="0irfg4wnmhmhqbga4mmxdaj6w7wfcgpzwi4mfg0bh9ixzdsbnp6m"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="1.10.0"; sha256="0kwz3dwncfnvmcyzvscc916bqwlncrpgfyv91m31hjlxp729hfa8"; depends=[]; }; - bodymapRat = derive2 { name="bodymapRat"; version="1.6.0"; sha256="0amx5fwvrl7jvmqd2c87w80qaaps89cjnq0rijhl475na0cim8dg"; depends=[ExperimentHub SummarizedExperiment]; }; - brainImageRdata = derive2 { name="brainImageRdata"; version="1.8.0"; sha256="13nfwbsf76vgx32m3jjs1lhng31wc2agm735pgn58wj38ndkr3ky"; depends=[ExperimentHub]; }; - breakpointRdata = derive2 { name="breakpointRdata"; version="1.8.0"; sha256="0z0bkdnn03xxwir89pn980zqylbyjcliqphdgqb38p5q14iqbmqv"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.28.0"; sha256="1y5vk8rjgp1x2cphs11yhnbyix020f2z8gb58bfgm4nnyc1h6l6k"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.28.0"; sha256="14cfyrjq7pskcz3zk3x25hl0ykg941zxp5sngkszhf93gxq06icp"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.28.0"; sha256="0as7j31mm3z9fwxs48bbq20qamsfvp54c9y66a9mk5sz2dbnf1wg"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.28.0"; sha256="0499n7zdpn810wbnpq1yd84ary5js1rxaj9y9qnpsm1r7fz0dqs7"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.28.0"; sha256="0n7pphgcihhda5h0p95mg71hdw2274r857dl97ph00w4n756dyph"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.28.0"; sha256="1j3api7z0f4ip1dvlhcz8c1hdb17f55igq781zdjswrn2gnph0wc"; depends=[]; }; - brgedata = derive2 { name="brgedata"; version="1.12.0"; sha256="14akzyvj7lngi8b0jfahx2j0bhqci7zyl1551jz7w70h4sxwnyaw"; depends=[Biobase SummarizedExperiment]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.28.0"; sha256="1mlk3k75hqn952g97bvyndrb46wddh7xf1krpz83ys196v8q30d5"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.28.0"; sha256="0s45cyqlm1cqb682c0rjvgzgqa8zdizwy1x362bvd20nyl43y3vl"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.26.0"; sha256="01mii0n6hqyfq5hvc12748px3f2idp8rrmikpzh646waxgb4jab4"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.28.0"; sha256="11wy2ginxafv7wwaxqnkyim864hhhf4v6gnmwb7ccbvr0jz8sh74"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.28.0"; sha256="0a25qy3b7y9rl77jzsl8s8ywvdnq2049l6jg4jav4w2rivr0lfm1"; depends=[affy Biobase Ringo topGO]; }; - ccdata = derive2 { name="ccdata"; version="1.16.0"; sha256="12gqyva7jgqjlfj2xyji9b0dzldii8h6c741q0dpjhz7yr0k9wgz"; depends=[]; }; - celarefData = derive2 { name="celarefData"; version="1.8.0"; sha256="0rhq2p6ldibcf3cw2x085y7pp3kxv8wpy3k42148d1mgyz2xgj8n"; depends=[]; }; - celldex = derive2 { name="celldex"; version="1.0.0"; sha256="17mbghg36216zc7amwhmkizfc4whzqvrwsspl1ab6cdfbwn9bysk"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.28.0"; sha256="0mcwvydv3dna578h1g5a8gpvk6bsj4vr2j08xwmxq9g4k0j74v5z"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.32.0"; sha256="018jkf6nmllyj1a1k2gxsgllrrkggrd7b6p2m96j8r7b9c112dbd"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.28.0"; sha256="0j97cwy08657d1b5c0sj7in341y0hadi2d6wjnrrmkw69xy3nbqi"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.28.0"; sha256="0dkml0za5yvcrw8yyam2z9vgxqhdb7va19wwi0sqwlxgr0jjzka4"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="2.14.0"; sha256="0pmz0rrd0hampzw72jqv7y8p1f165pkq0sir4xrj91xarnvyh4bk"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; - chipseqDBData = derive2 { name="chipseqDBData"; version="1.6.0"; sha256="0nnyi95h4wzzidjblzgcxrw806zv11411vnd0h7m4qqgdmsf8zcx"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; }; - chromstaRData = derive2 { name="chromstaRData"; version="1.16.0"; sha256="0ph80d53598635bb8g61acg5rqwnj8644a0gh297r4hgbvwlflab"; depends=[]; }; - clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.0.0"; sha256="0h7i4s98sakyqiix8g65wqfhjqs22fni20sbdkhmnf4lji6dv1jp"; depends=[ExperimentHub]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.26.0"; sha256="0qfvijv1hmj5sqmmrcvnq06l9lclk01r48jac958bibh81vw7n2c"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.32.0"; sha256="0r2670781hz1xgsn4l9np7svjjf0awlyk85zb4vycjyv38k7rllc"; depends=[Biobase]; }; - curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.2.0"; sha256="14bnizcx2wr87nkl4f74mm4kpbi725486ja68yy0r6y2dj65q29b"; depends=[]; }; - curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.6.0"; sha256="0w9dfzmkn3vpqbzy088gx1bab2k760w3xsrlhnggsq43qkygyjzm"; depends=[ExperimentHub SummarizedExperiment]; }; - curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.6.0"; sha256="0irpqyva4bvdrph4v6f0vyh5lwsyaylsj06fji90ssia3jd7nn6p"; depends=[SummarizedExperiment]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.26.0"; sha256="13ji5a6yfbk84araf11ynqy85psk68grk57bcha4r25x6w1anird"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="2.18.0"; sha256="0nym274s6x5rcj7s9sn5zimv1vkc3llwz65hpv99ip0gm4pn5hqm"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.22.0"; sha256="0zb6f6iccam8dgkr8qlr5qarn2f8rbcy93rzc4f3s29m9p2d8srl"; depends=[BiocGenerics nlme]; }; - curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.20.0"; sha256="0b5y1qh7qq6q79irsg72274cbz7b4ibv8z4n2jpjfnfbacr3w6ih"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.28.0"; sha256="0ghfy49zg7v8971vks9sdshk61bnzsj8h1hj7x2c18nvsnfz65zm"; depends=[affy BiocGenerics]; }; - curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.12.1"; sha256="16xilq3dgsj8n6v174iczzv3i4mkrflhdrj0bnf4pxmfkbmf02i4"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; }; - davidTiling = derive2 { name="davidTiling"; version="1.30.0"; sha256="1ql57f0wd3xks70dnw5f8sghm0k6fsc11yp4z4ibcpl7wma43hd5"; depends=[Biobase GO_db tilingArray]; }; - depmap = derive2 { name="depmap"; version="1.4.0"; sha256="01cgd87mkckmgyri48d4h9lmhlm520mbc917gnrbygha7zrsgrz9"; depends=[AnnotationHub dplyr ExperimentHub]; }; - derfinderData = derive2 { name="derfinderData"; version="2.8.1"; sha256="13swii4dl3n7cb4w656as27lgxr8bxc3sdj12fwlyv8yz9dd7b24"; depends=[]; }; - diffloopdata = derive2 { name="diffloopdata"; version="1.18.0"; sha256="0pdhw9m50pm99frw2ifn3pbzd47q36kla46s44kpq6ak9hn05253"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.22.0"; sha256="0r9kmg3xqmy8cx8w2g4lf8baap9aid7yikilyzxzc9n650l27fh9"; depends=[Biobase viper]; }; - dorothea = derive2 { name="dorothea"; version="1.2.2"; sha256="172zwgppy0ral48f08wzid11m2ixhxb0ycyp3514kgr22w31bnni"; depends=[bcellViper dplyr magrittr viper]; }; - dressCheck = derive2 { name="dressCheck"; version="0.28.0"; sha256="0kcaa44phaxg4dqgq195bc1fpxws40jipfz3lbd7gg7xyp6z7n8m"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.28.0"; sha256="09ihlrljfz86m14gllmwkp2i947zv3zia1ri6yp651xr049xp2br"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.30.0"; sha256="1w0glg3sqvyv790qgdyb2jf717yqsd7vpaysx59rakgx52bbhcjr"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.30.0"; sha256="1wk1k46nlphqyv4010glmv1wqrlsq16lqjqrggp5f42p98fmc6mb"; depends=[affy ecolicdf]; }; - estrogen = derive2 { name="estrogen"; version="1.36.0"; sha256="1ry13idsdiwwhcj12wl8mxji0771cqm4q4rhgxxc7hcldvqx8gkg"; depends=[]; }; - etec16s = derive2 { name="etec16s"; version="1.18.0"; sha256="1z3nh61r6gmqr29v2rkfil0a4pgw55ysya86yw1jg7bg0jp9i781"; depends=[Biobase metagenomeSeq]; }; - faahKO = derive2 { name="faahKO"; version="1.30.0"; sha256="15wscf2f07pjvs3yrdc7lcf9a8wik9rwiljbx49cadvhm8gh80fm"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.28.0"; sha256="1jk4na7sbhxkv73yj0b5jm36mpni8617r52nvislj83k3pp11viv"; depends=[Biobase]; }; - facsDorit = derive2 { name="facsDorit"; version="1.32.0"; sha256="0pmzkryl3qj8fagf2jhgqc6w5l8r9vwfx8hv8dihdda3h7kyisv4"; depends=[]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.28.0"; sha256="0aghx2bv915nzx5rfmyijg2pv1pipf5fq88y3n01ca8lh7c2l0kd"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.32.0"; sha256="02mf174z9fwywaskajxcdpmpmqagbw05g8x9bz6518xw54r0yxw0"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="1.10.0"; sha256="11aacszkknddaxg9i8vnwhdw4w6mr9y8qkddwgwhv305y4hdaxg7"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.26.0"; sha256="17dzilkn4vvn5s56gz85h2nfvkfvvg7a2hvc9vlzz46bhldjh639"; depends=[flowCore]; }; - flowPloidyData = derive2 { name="flowPloidyData"; version="1.16.0"; sha256="1ixxdf15zxkxmvfbq05w505hhy7ybq6bcm5hbyhjjxgm29lnk2xi"; depends=[]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.2.0"; sha256="15r72pgbggp1b61bkxb775bsga56za2l7a72bkhb3065k6qndjw8"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.26.0"; sha256="07fj295ndshyxl0k3gxws9643wwk2xqshbnmm7bszai3x3ngiqc5"; depends=[]; }; - furrowSeg = derive2 { name="furrowSeg"; version="1.18.0"; sha256="0dw0r35gng707zfzmw6mza9zm9k4a38vsm6ghznakygffawan5dg"; depends=[abind dplyr EBImage locfit tiff]; }; - gageData = derive2 { name="gageData"; version="2.28.0"; sha256="16lmnvmbykvbdgwyx7r2jc217gb9nidn81860v5kri99g97j4jdn"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.28.0"; sha256="1rir2b0zrgc4jrbfn5ah1apfgk04dxbp1ss7n68scm1880gjha1v"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.30.0"; sha256="1a5516ccps6mhklbjmzp33dr1pcq012ryvl4acmw85kr9hw5bdws"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.28.0"; sha256="185x023lxyvb2mza22m65y94xsl6ydk7bbpps287gp00d571skyz"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.26.0"; sha256="02llrmqd6pl882p0s0jb9cqi2jl8p7wwn6gyihkh1x6crgcsklkz"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.22.0"; sha256="0igjsvfnws3498j65ifniw0kbxfqpfr59rcjddqvq4zsj453fx1g"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.22.0"; sha256="1b4bjrk3lb3ina3xlb6f0ii0a0apbk06j2ilfkrv523rh55xgnfv"; depends=[SummarizedExperiment]; }; - geuvStore2 = derive2 { name="geuvStore2"; version="1.19.0"; sha256="15f60889x0mf8ccrzxp3bsrw84r6wl5as2ivgh8ql0f0kyzprapk"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - golubEsets = derive2 { name="golubEsets"; version="1.32.0"; sha256="1rggm375b0856qs84gg64xc2m06xq5y7smbwsbvxlnhrbayfgg4i"; depends=[Biobase]; }; - gpaExample = derive2 { name="gpaExample"; version="1.2.0"; sha256="10763nsi93rwrsr5zw5bqmzdfg5b1midcf0461i1gqisj8x6wyxy"; depends=[]; }; - grndata = derive2 { name="grndata"; version="1.22.0"; sha256="1av4fbdg835qx67bzyfxwbwyp7rskpi4w60g1r6vvs8grfwzjs5k"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.22.0"; sha256="12kb855yjbdaf5i14x4b8vzzwy4j2v8mawdrwdncwg7j70kc478n"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="2.10.0"; sha256="1rrpq1w2n679glq30z132v3mhja515x62jgvmjcy0h3n4wczski2"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.32.0"; sha256="0lf4fkdikdgg90amwdsb30z582l28g232x0yamc8ymajmq0382qa"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.32.0"; sha256="0c4wwqmvm185iw65bjd28mjjr5bkzj4vx4j2awlz0pscsqidx5fb"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.32.0"; sha256="189716h3c1v83hayh9mc630n9aawcg1kp94ka47fdsw7w7k4i60v"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.32.0"; sha256="0ns6qz5fmwbdf0hlymwzgzgqaqa95cnwwvdrrw4pszzi86pagqag"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.32.0"; sha256="1jv8ikdb2cy8a8bm375w24zkw9ldfdijnnsxrj95h35f4blnx3d7"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.32.0"; sha256="0gi7m2qprggaq0fxwda0n7fyk6zvvz60avby78j75xipw4mq1dy3"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.28.0"; sha256="0nnyvs1xdiq9ik4jig87xgdq784fzq7imd5v4i0l20p80w4cccs5"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.28.0"; sha256="0fky9w11k2zv58768w5ivafdvh3nfg53vx74cmq6jmgcp4lfg714"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.28.0"; sha256="1isdnvalsd61kqh6r4dq76bgds35f7ag0309cxwji6dqhw7qs3dc"; depends=[]; }; - hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.10.0"; sha256="0hrmqxp66mw2s04jdh5f5866a75kpbg4nf796f2fb090hi83gqrv"; depends=[Biobase]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.28.0"; sha256="0qfbf1m4pwfq26svcc20pn6yqz7hh6q9hmvgz832c1mgy1mza9ab"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.30.0"; sha256="1kiyj39hqpvjz21v64k59vpahxq1b0wa3bdvbvdsak2g6py6f512"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.26.0"; sha256="0i66kbdrry5qclh615w94gpr5g7h5kpqzs6x4sb290al7kvya8q7"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.30.0"; sha256="02vh8xykbjc287hkayp7i6v2rydn26g0jj6njr189dha9y7amrlc"; depends=[Biobase hgu133plus2_db]; }; - kidpack = derive2 { name="kidpack"; version="1.32.0"; sha256="1knzb2rwa58i0d8snfgq342qm9qch3zvv38fid5cs3a4kvy9301p"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.26.0"; sha256="0x0i4v8li4ina1rdxps51m69mlla2v7w8f4rsnsa4fhljjizilii"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.26.0"; sha256="1v2axfyjmsnqgjrwa9pzjmdkyiyrdhc6hia3blrmhlj2wi307pnq"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.30.0"; sha256="09nindp52bh8pzyjb5mq2210i5643srmzrzwf65p02y9444jx74b"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.28.0"; sha256="1zvq681zi26568ispcsnk6y6g2vxm8zqmglwg5k31p8hk3j3dc45"; depends=[Biobase]; }; - lydata = derive2 { name="lydata"; version="1.16.0"; sha256="07w87qv15physk1h04l06514z20hh1y1hm9g13swj381ivd81g2a"; depends=[]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.22.0"; sha256="1003cf8malvh9jzykcps7704053g8nlys1ibaixa8m097flrh1y1"; depends=[]; }; - mCSEAdata = derive2 { name="mCSEAdata"; version="1.10.1"; sha256="1fbalqmy2f3wvlnhm0x3jz7hjbrdfxzi2xd4728q9xkhijg4rzca"; depends=[]; }; - macrophage = derive2 { name="macrophage"; version="1.6.0"; sha256="0f3khznbvixqm31avs3bzjp2g6n9ggk82rwklg59r32f81vdv263"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.26.0"; sha256="12b1cxfhvv88xz28qgqdpj67ymz54h48pi38pnagmg0521qp06cx"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.34.0"; sha256="0km1q7ghvpd67ayqkck2wjcvklpjwwc65ymind04m7rjvlka64v9"; depends=[]; }; - mcsurvdata = derive2 { name="mcsurvdata"; version="1.8.0"; sha256="0ydqlyb5pbk7rqfbs4vwix616kmjva7c73r6mdklw4a1z0p4faa9"; depends=[AnnotationHub Biobase ExperimentHub]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.26.0"; sha256="19ckgnlr6vv501ral8lqw0g1wglq40qyh6pbk7dcx6hjicdgyga1"; depends=[]; }; - methyvimData = derive2 { name="methyvimData"; version="1.12.0"; sha256="0wmyjnx8y3vpfayyfxl5mfcfknhibhgdkmzczj50w8ix94pg8wgc"; depends=[minfi]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.28.0"; sha256="1wygl7gh37hf750wk6z32yhjgmqdk51mphigf7kq8hibdzfc8cc1"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.20.0"; sha256="01zdmn0mk7mlrkf6f59693bq6pjzgyd9i30zcajii0f1qj5y326b"; depends=[]; }; - microRNAome = derive2 { name="microRNAome"; version="1.12.0"; sha256="0fhhgxczj4qjzj7qhcz61yh65dn24pwbzh4ysd3qqajgzaamnwjc"; depends=[SummarizedExperiment]; }; - minfiData = derive2 { name="minfiData"; version="0.36.0"; sha256="0gdyyy30608l0ldyv8w8vzy12m92vk179frwmi7q6mrhpwx71pxm"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.16.0"; sha256="1m4s8wmz8ipb3bjn661k7dn0q6yphsfym0ascy40p2av6zhq5ajw"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.20.0"; sha256="1p2pn2gs0d6s4jy5qsyr26vd8cbc48j13496f3n5j6a2c4sqgcs8"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.26.0"; sha256="06vr3r4a3995p99v19a4jk3idgqqgdm5fki400z5x62pmnc2r4k3"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.28.0"; sha256="1z6d4nn36qby1fyi7w9r0dmilqx0w9zid6lzg5swcc4jx58744a3"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.28.0"; sha256="0a039mmcawwmr8mmapw6asw6rp9xj29s03zvkndhpg7lx0ss4yi8"; depends=[]; }; - msPurityData = derive2 { name="msPurityData"; version="1.18.0"; sha256="1j0r8kbwfxaw612c2314cw8as3c50yzj46zl5ggqqw6112shjb4i"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="1.10.0"; sha256="0i4vlssc85k8mcwsbk5dq35xcq8dzwf7bx0ib5np779z8ry92rl3"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.30.0"; sha256="17vnrvif0i0swxm3vzgmd2ci2wbqc28hg136hpwmid528dpn6myi"; depends=[]; }; - msqc1 = derive2 { name="msqc1"; version="1.18.0"; sha256="0mp5fg3i5sq7xpdslr237b684y0kgkwni7h024pf2ddp46vl3mji"; depends=[lattice]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.20.1"; sha256="1c0jsdlgpjvi096ls2kljhy0rgbw0c9a07fkjdp4sg08j881qvyc"; depends=[]; }; - muscData = derive2 { name="muscData"; version="1.4.0"; sha256="1wl85wwd62341cczyan8ybad5mr359hl9i7fnjcs7mcar3x9d1xf"; depends=[ExperimentHub SingleCellExperiment]; }; - mvoutData = derive2 { name="mvoutData"; version="1.26.0"; sha256="0jcqbbi6qnbmcx8f6j4awrkw5ayx7rkcd669clxk9qinanyj540y"; depends=[affy Biobase lumi]; }; - nanotubes = derive2 { name="nanotubes"; version="1.6.0"; sha256="1njdg1j3f7aszy0msvdh2l1kbllijpp88r788fayh5xn7s0zn4qd"; depends=[]; }; - oct4 = derive2 { name="oct4"; version="1.6.0"; sha256="0m5hwf9lwpaxc5ivplp60598ps9hf16m7bm6gd0ybz6ppf29b4f2"; depends=[]; }; - optimalFlowData = derive2 { name="optimalFlowData"; version="1.2.0"; sha256="0sn3zxbydd3fcn0zw9di5zrfdb827r6vqr5n0j71fssgflakf2gk"; depends=[]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.28.0"; sha256="0wpnn2ldalcfcvh5b22ilavw4gzz9i2731bva3sk29r0v42nyg2f"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.28.0"; sha256="0xpn0fa4yd1rjdzfvzvaz27qfaccbkw6n46731ya8l7vj5p69ash"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="1.18.1"; sha256="1b9d9yyjzbazjbfpdlmc2izhrr73q54826bd9gsa2rfr2cxksy6r"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.28.0"; sha256="0hf0qblpf4hjcvpqlr609pic859264jwnfx4lr92l39jg839r9z1"; depends=[]; }; - pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.20.0"; sha256="1241i0p6yxhmsw4jq3msc15h3mypajfb8mlp8ngzdmbqyfkz7hwp"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.26.0"; sha256="092kgmcfcgyw7wfkl93d6xw8zdx8rxgv3537midzkxv79w44va8x"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.26.0"; sha256="0j8qpx9xmfgbbj9q48ry1vgcikh0hd1a4ym2k47kcxgffbml8ibq"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.26.0"; sha256="1b6q90c9dp94mhg38ds2z5rqk7f6pl4macv5knj35hlbn858y434"; depends=[]; }; - pcxnData = derive2 { name="pcxnData"; version="2.12.0"; sha256="1cvhakxq4ddlfsn7ddja5xzhf7882wfrcapi037vh0f3rnb70q57"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.28.0"; sha256="1cnzw244jwkp3zpip7v9kvaj383bzdfvjxjpm4mapwlmx1068h16"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="1.10.0"; sha256="0d5adrh8b9i7xbhi5vrfdijfw20pvl0j07gvwdc6ifcyfc47dd5q"; depends=[GenomicRanges]; }; - plasFIA = derive2 { name="plasFIA"; version="1.18.0"; sha256="1hryz1agnlx7hrylxjspciw97slza6fbrwg68mqrkl8xl9z8sn3b"; depends=[proFIA]; }; - ppiData = derive2 { name="ppiData"; version="0.28.0"; sha256="0rkmw86xzcjhahfdmrnani2ipps626jj68sgbh26bj2d809jc177"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.26.0"; sha256="182fll78mvn3bqvvwz7pirr830yw0iqvynscjxvgh19fj5gj9mmp"; depends=[]; }; - prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.18.0"; sha256="1anbpjlrwvnrh5l2v9v34rrws1jw6i5zv352dklhqb9ayw25p8pm"; depends=[Biobase]; }; - prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.18.0"; sha256="04gly2fxyngwbsz748my157358a7h0qqiqvg6bvm5zap0x93j3i9"; depends=[Biobase]; }; - prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.18.0"; sha256="1z7fv7wnqs5d8m56kcizdrjh85fbykrb2r42xbg5l2vj5vgapsf4"; depends=[Biobase]; }; - prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.18.0"; sha256="0fljj4ybrpry7sjq7l1g9kxv44gyqpih31ysiqbc6sday2az4k6a"; depends=[Biobase]; }; - prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.18.0"; sha256="1kdrc8nxwdr8yf5b24jvlx9cb05iflvvxpc3ix2fsivzfhnh9d20"; depends=[Biobase]; }; - pumadata = derive2 { name="pumadata"; version="2.26.0"; sha256="1k3yvpgpbyhnncxa6fgqyaw23ym8z8dqi6fbskg6k8s1a8ddrz66"; depends=[Biobase oligo puma]; }; - pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.4.0"; sha256="0hwcrhb305kq9d104n4l024ywvxissjhr5pyp2vgc9n1y13q53hm"; depends=[ExperimentHub]; }; - qPLEXdata = derive2 { name="qPLEXdata"; version="1.8.0"; sha256="0mp4sa27k0ar6xbjjn0vpyf7hsq4fsnn6fmif1a5x03q8wjbbnn7"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; - rRDPData = derive2 { name="rRDPData"; version="1.10.0"; sha256="0r5zjf9aklhczshgafdmq21dq24ax5vr4akn2ivymarriwxdry1h"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="2.12.0"; sha256="00awxpisrhpqqs80jkmjjk7d8gqchzihw95bp7ix0dr4hif0rxvm"; depends=[Biobase]; }; - restfulSEData = derive2 { name="restfulSEData"; version="1.12.0"; sha256="0z66kkwwdwkpkbdxzs3mwv34y4r20wsz82337wvx5mz2hix7y3zg"; depends=[ExperimentHub SummarizedExperiment]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.28.0"; sha256="1za1qxvrxg5x8v5vmy9n4mknli9ljnap2acr08fqqr7l87dkrahk"; depends=[]; }; - sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.14.1"; sha256="1v691pdllj2nsvarli36xdgl1fsqwd2z6m5kfd9lp18sa3913w2l"; depends=[SummarizedExperiment]; }; - scRNAseq = derive2 { name="scRNAseq"; version="2.4.0"; sha256="10wq3n2v88rhaddvda627d5lghlxgvkwr3v8i2smkvcpwiw8q3cq"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scTHI_data = derive2 { name="scTHI.data"; version="1.2.0"; sha256="0igwi7mnv6fksym5vk9m9gmrz8gbdrfsbybd4rqw8dwx1dab4a8h"; depends=[]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.22.0"; sha256="1csngkb6a39z6mg1dav5fq1s3hymg89zcfk8djyllwgii98s2p98"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.26.0"; sha256="0v0f4fkc5v3z4zp3dfp882mrapzmslmvgffrfszy1cln14w4hl7q"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.24.0"; sha256="021nvhm5r8n4rdrpl81x516jhm5mbwd5g4xwgaf6clz5vaa84w1v"; depends=[Biobase]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.26.0"; sha256="1qsrf53prbmighqwacpvbhq5c30cgnvy7d2mhrnl6bh2bllhbim7"; depends=[]; }; - sesameData = derive2 { name="sesameData"; version="1.8.10"; sha256="1aa3x49h9cnx9y8m2l6y9673772nj4is44igs1r2cwg0c6nv40mh"; depends=[AnnotationHub curl ExperimentHub rmarkdown]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.26.0"; sha256="17x8clcw46s7rdv7kqsail2gx19h634q5nkpf7sphhs5i2yv042l"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="1.10.0"; sha256="11y87nbj1npww9r4l7h4sy6fdlp2gd92hgp8zw34y1x1h3fqrpml"; depends=[]; }; - signatureSearchData = derive2 { name="signatureSearchData"; version="1.4.0"; sha256="1fhyi6dc185ff417516m6pn5iyrq05sl5f7qcbys4916lmhqkj46"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.26.0"; sha256="0z2yll47ym8zc26mnn6ra7xii714fai3pxijck92spw667br3sbx"; depends=[]; }; - spatialLIBD = derive2 { name="spatialLIBD"; version="1.2.1"; sha256="1zvf0jygcn0bq789kn8aswdx4sf7sgkzy8na14r3qzmxal3lm9q3"; depends=[AnnotationHub benchmarkme BiocFileCache cowplot DT ExperimentHub fields ggplot2 golem IRanges jsonlite plotly png Polychrome RColorBrewer readbitmap S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment SummarizedExperiment tibble viridisLite]; }; - spqnData = derive2 { name="spqnData"; version="1.2.0"; sha256="163gq01flwf6hssb3l9kal4317gzd5wyf6zk21i0axng8dd3mq0r"; depends=[SummarizedExperiment]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.26.0"; sha256="1vfz250ms272qbddsfwqjpjzkn5l24ik1jpfym5s6p7jc4mvvljp"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.30.0"; sha256="02m160cv70zl011dbhkx7b4qh84lpniymzc46cdlmgvx2v2p765v"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.28.0"; sha256="1v4w285m61v8gpm474nj9lskwwp3j9q65pna96nabilkrdyydcns"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.18.2"; sha256="09bcpxa2l8xrc68cmp57d8f2ysv5jp8hrwl55bwvs4z5wwmgspzg"; depends=[BiocGenerics jsonlite remotes]; }; - tartare = derive2 { name="tartare"; version="1.4.0"; sha256="0hsm7z2isyskmmk6im88jhzvxir5ax7nvrgsbkk2dks7gkqqwsv1"; depends=[AnnotationHub ExperimentHub]; }; - tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.8.0"; sha256="1yx3j10fy8ki4ghmmjsjqs8wp59pfl2kp2l9pgjn4fpd5vnd5kvp"; depends=[bsseq ExperimentHub knitr]; }; - timecoursedata = derive2 { name="timecoursedata"; version="1.0.0"; sha256="0y4qgypk04qn2ni7n30fqjvmcmbr5af33pvzpkk8g459vxp4ai9n"; depends=[SummarizedExperiment]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.28.0"; sha256="12r9gm491v4srz6xa9mhwlj3r6iv51qd63f9jy29wc8cr4j4zzr1"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.28.0"; sha256="0k8yalkdj0dpwyshi4dhg7nff1wxbjwpxqfkckyp66xhjw0wacga"; depends=[AnnotationDbi]; }; - tissueTreg = derive2 { name="tissueTreg"; version="1.10.0"; sha256="0qwc7i8az7dk20r37kwaw9gmqj72xq8aqw0z65c20k1hb8nl10gd"; depends=[]; }; - tofsimsData = derive2 { name="tofsimsData"; version="1.18.0"; sha256="0g9gy50waj0v0qjpbyz1vrx8i60r7xsd5lrnd1acpgwkz72f60lg"; depends=[]; }; - topdownrdata = derive2 { name="topdownrdata"; version="1.12.0"; sha256="1g3mr37s7a3brmc97smkm2sl4lirx6yalb8dbfnwfzf5ccwbrp2h"; depends=[topdownr]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.28.0"; sha256="0z0fkm33siaq3h6nbjwa0dici1r0haghh8grvpsg60vn6hiifp7l"; depends=[Biobase]; }; - tximportData = derive2 { name="tximportData"; version="1.18.0"; sha256="0warrg8381k22gadh74lzbigfz4ccr4h5b6mb34ny25hypf9zpsf"; depends=[]; }; - vulcandata = derive2 { name="vulcandata"; version="1.12.0"; sha256="0iwmjdrwqnjdwb3dhcspn539vy30w74rh1qd4yhwh23iilrikhvp"; depends=[]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.26.0"; sha256="0mhav14kjqcjp381wb5ghmxqm0ad0krjk42c1jsqdi1jmqf9bg27"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.30.0"; sha256="1vxa6r1kplg5drj698alr5s58gfj98hcf92vklvvayn1hshl793v"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.36.0"; sha256="1yc3h3lap8ih2qampq7f178rb7v5n8bz7i3wlf415zqn5cmn1vgc"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.28.0"; sha256="0s8hxyhbs5px9k5lhm3snaw3xiz2h8328fgxaacacnk2hwn742gv"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.26.0"; sha256="0dnp3zbf2hj736jwjhmqdx0lq0pxl9ysx8xbzxzarqhh55bbnbip"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.28.0"; sha256="161ar7jhzqcrfihzrc8pxxh1vhvc3vp9a504gwkni028dqljm8gv"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.32.0"; sha256="0bamz28dp3pxad45qm26mvi1wxmvdsq69ndsiqayi4k2m4qxvl0y"; depends=[Biobase GGBase]; }; - yriMulti = derive2 { name="yriMulti"; version="0.19.0"; sha256="1n4wcz2vns9bshhnl55zwf6545qlyfl2hl8wis9nfwxq3rj1xqrv"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.10.0"; sha256="1865ygc4rfk56hjpnamzwlgrc9axgn4zxk2jhlrfpajb50npxw0n"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.22.0"; sha256="1q4kl02f0dvbyqlsqhfj4m42vlsz6vsp9p1asgfsqlpbzjflc8r3"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.34.0"; sha256="0qwbinc07s5y6d2vmlmbl4rrsbsxp5f6bndanpaamc5vc0rnydvc"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.32.0"; sha256="175rxan8wgzqc3x8gscn9v3fpfidgi0wypzqw6d6r8gzf3a0h01n"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.28.0"; sha256="1gqz5jbfh6k3pm52pggdgccp6ydp51wnlwys038jak15zjxk876m"; depends=[]; }; + ASICSdata = derive2 { name="ASICSdata"; version="1.12.0"; sha256="0xprdz7g0xa0ha219c0jbvdf3k4vnqfilf3420s631h2fp7kcjg6"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.28.0"; sha256="1gn5cb42iaj534ik80kci0qqxx38jwjnw1qcvhr4z91wa8qgzrl5"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.26.0"; sha256="0g9i38hmzqyzg073p426q2kha67g62y07p2756ans8cmyfsrn9y9"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.30.0"; sha256="1g7xc2qldqpc8pg07l91gv593xm8rffygdwy27h5v1xz97wm8p18"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.30.0"; sha256="0998584mz6ggl0j84920bwc69f7i6p24i6ki3c6dhqjjkw7bg0xf"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.30.0"; sha256="15zx9bf2cqv3drf9yi6rkdapwk1n7i5iwymj72nfk8qn3k8hn4x0"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.32.0"; sha256="0042i6ldqdm2p9lr8cyzkf1638ka5ycmzvjxmwhg0mgbrzqs9d57"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.20.0"; sha256="1kp3y20zhmsgy3yq02sd0ascqgg3m83whrld3dw6sdbibfxdr0wc"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.22.0"; sha256="0bcmyxl1qidb5fz2s27ljjlf4f7kq5ii0287sapvq0wf1ll1z6nr"; depends=[]; }; + AssessORFData = derive2 { name="AssessORFData"; version="1.10.0"; sha256="0vnq5mdds7ikyivn03yvfrzwi8aqn4k1pg72m3n6klm3dlfmf3vn"; depends=[DECIPHER]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.30.1"; sha256="17a3rrl1lqm64cwjaw0vx68gavwl21n5qfnk5lsx7b05jiw2g2ly"; depends=[beadarray GEOquery limma]; }; + BeadSorted_Saliva_EPIC = derive2 { name="BeadSorted.Saliva.EPIC"; version="1.0.0"; sha256="18glvbpq5anbciw6bdca7z8fcd2yscq0bh83r0ynsnmgi1an63px"; depends=[ExperimentHub minfi]; }; + BioImageDbs = derive2 { name="BioImageDbs"; version="1.0.5"; sha256="1pdzaql62kb7xcjjv5az9xpwfr035cq32lvq7kadlakcibrgsfah"; depends=[animation EBImage einsum ExperimentHub filesstrings magick magrittr markdown rmarkdown]; }; + BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.12.0"; sha256="0rj6if7l84lanjms3w86iwcmxgq3bfvksvlahdzkdw44qgyqlj13"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; + CCl4 = derive2 { name="CCl4"; version="1.30.0"; sha256="15naslzbccdx0ibmlyxjmyqs556ay35cadc4224d5cn7abid0yp7"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.32.0"; sha256="0x5y7k683h5kjfiknjfxk6pw5d577ranl9ijqq31fzms0r3lvnq0"; depends=[affy Biobase]; }; + CLLmethylation = derive2 { name="CLLmethylation"; version="1.12.0"; sha256="1j8a9f7kg78dc6sibrl66yyh96w6h7lzqn8y2hvq8n8w4n2ki7sb"; depends=[ExperimentHub SummarizedExperiment]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.28.0"; sha256="1g74w1yymvkx8yb85apfzgfl11r90rga9pniw7rf9lg0bisl6662"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.20.0"; sha256="0y66bwgspxrvypbzj68749sq08fxc1z1f5ma2hjq907igzkw3x8c"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.28.0"; sha256="0nz96nz8f9ca88p844yr2hxhx87x9z55fbd5z8l9ribs1pcm6053"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.28.0"; sha256="1yksryh96pljridizb33z956z0k47vgb84l6r44wdzq3vsjxmrgr"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="1.12.0"; sha256="095l0j0vhsrj97gyzqyk97c0j555ix7swiqgjmcahm2flqgxnksw"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.24.0"; sha256="0m0yzr4iq3c662bj19fc5aahkxs4g5s5v9vjyz7jq5ivqyrxfhh2"; depends=[Cardinal]; }; + CellMapperData = derive2 { name="CellMapperData"; version="1.18.0"; sha256="0xm2rh7s2gwgid9fbzbph2snm6slgg9sa4r99b7ai317qfi2x86z"; depends=[CellMapper ExperimentHub]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="2.24.0"; sha256="1i7c8m4qqblp9cj8ndiinma6xszaq5ncg3d468n9gi0nw1s9qqxv"; depends=[BiocGenerics GenomicRanges]; }; + ChIC_data = derive2 { name="ChIC.data"; version="1.12.0"; sha256="08gxdzpi7d9zycx7vp9y40bpw4ljkym9j5p7b3dxqw1b9s1vwmaa"; depends=[caret genomeIntervals randomForest]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.30.0"; sha256="1h3df9475yglgf69f8xyb36cxm7gb14kai3c2jvdwnhf9y7g30hf"; depends=[bigmemory]; }; + ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.16.1"; sha256="120z13sfhnd6rdx99ssfydnizx032yviysfya04dvvlynbpsaf1f"; depends=[]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.30.0"; sha256="0v45yy0vpcrba3vmjsw9n64c7klzpky5k121ydf6g17msk5vynr6"; depends=[affy hexbin limma qvalue statmod]; }; + CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.8.0"; sha256="0ggvbml8rmsn2rmp61j2q6nvhgqn9p99lx02avflhyas4rzlslh3"; depends=[]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.28.0"; sha256="0jkqcppnqzj7kl7k74nbc3qzynbwn5sh4fivirs9znvl6gsmn6vr"; depends=[]; }; + CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.10.0"; sha256="004k5rcyz780gv1y6r3d661pm1xvrjh1hry53x1zy0gd5z8slvz0"; depends=[ExperimentHub Rdpack]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.24.0"; sha256="1mx7ia8aca9gxzgk6hds5hya2pix2wwxwhvj5h8qq9r0z5a3g4vl"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.22.2"; sha256="135kdn2rnj5bkdj49k08daidvm4h0zgdc9rqavwjpjx4wnddpdzp"; depends=[knitr MSnbase]; }; + DExMAdata = derive2 { name="DExMAdata"; version="1.0.0"; sha256="0brw2qspvgpv149kkwv30cj3lyyv7pl00bk801yga2xv3mi4hl5f"; depends=[Biobase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.32.0"; sha256="17irfvdins7cb1kinbf3x0cbmjd51dspz25fv1vbv7531rspwc3b"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="2.10.0"; sha256="1nxpxh5pxl4rv9m62xia6c969jzpkc4viw7dfz89fxqdmk1sfx5d"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.28.0"; sha256="18wbgrlax63kaqbrwr4gl3pid1xwdp6z9dcvrxyp9gx099ipw7ww"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.28.0"; sha256="11l3rq59i49p3x9cl3x7k17hv57vijrjingap7hhsrjg0jgqk25p"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.24.0"; sha256="1x7whi3r5dn4shndc9cvxy89j79gyy1pvjdni3g5l8qgyd7baxhg"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.30.0"; sha256="1mqr1kmyh23sn50gj3cyljsmbr5fqkips5gbmkkcmkdcli3jz8jz"; depends=[EBImage]; }; + DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.2.0"; sha256="0nkpcpwfc8cmyfklwfa1zzvx58npyfp07j4pk5q26wp3ly02y80i"; depends=[AnnotationHub ExperimentHub S4Vectors]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.28.0"; sha256="1h4x1gisl26rknmba00ygv25s8rxfdlxk32mdf4n2z5q68nsl7pq"; depends=[]; }; + DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.10.0"; sha256="1lbgznbllpi23lf5ap58fr89y5x2m54k3wdy6myv62336jk7m8w5"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; + DvDdata = derive2 { name="DvDdata"; version="1.28.0"; sha256="0gh4h1zapw8b0i3jwcnwnhblzqw3rsb0ah7wmsmqv0mzmimvpasc"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.20.0"; sha256="10lqni9q1qivkzlcy5ylq7z4n3rqm5x97i369rfnybsb55gpqqi9"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="2.16.0"; sha256="0w0zbj4fd1wkrqz7xrm3jqdhf35dbyybx71b595rcblx1qw9q4k7"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.30.0"; sha256="1s1m9r34qhsy33cl7gl6yk9rpd4k6ms25mnd5dfdkabpx537sa7c"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.28.0"; sha256="1zpq5gnhqpbf6wm7s4kijjd64sf81i38n4sjq7sk7f5blijl64gi"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.20.0"; sha256="109wp4yz37j43xas5dh1mcyz8zhvchrla7lhkvpy4jyxbk2z3pvi"; depends=[]; }; + FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.2.0"; sha256="04gi5rqbz3k1v8cl8kfhx1jmby6dk8qhkwdpfasyxm7xd1ific78"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.28.0"; sha256="1sg2ljgpnghcf1lhpfs5qypv44pv5fqg6b0j98n5mn4sxyrr7ckl"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.28.0"; sha256="0i5k2z2aggicq3kbjyk8qcg876slfk1157vw3ld6vhxcfr037dj1"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.30.0"; sha256="0cxxcsxczf01wn8qhbd1agzfw9ga8jkqwpbg06cyhpa9q7ljnz8p"; depends=[minfi]; }; + FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.10.1"; sha256="1cycd37hqqpnx66b6hbl2c75k4ychc92r7w7ib5dxc458n21wyby"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.20.0"; sha256="0456w9x8r8z4g549n5znzd4cgbfkg6n6i3wkiwarz7mncgz6hfla"; depends=[minfi]; }; + FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.8.0"; sha256="07bzpcm8bwj61jxr09p11d6f595r0z5b0yr04wq85pgjyrhqvixp"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; }; + FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.18.0"; sha256="0gg6prd8jh7a84nlv9d60rrjxhdwv93j1kbsvwwp4bw2mpd54r1m"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.28.0"; sha256="0m9jgiwcysk3rv3wr4m887lzjlqdmn78nzr25x4qi4n2anbl4l37"; depends=[minfi]; }; + GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.10.0"; sha256="14h6j8g01ss9jrh5bllwly8ck115hazl89xb7n9agsyn5ary13zb"; depends=[]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="1.12.0"; sha256="08d4qk1qsimqx1m4dh4cl0m73lf8wpnr9fnx1r5mk0znq2rvr621"; depends=[]; }; + GSE13015 = derive2 { name="GSE13015"; version="1.0.0"; sha256="05jm20xga65lc0qf61yv82k18vxxw95s2jmfvm1ibxhcg0a1p2kp"; depends=[Biobase GEOquery preprocessCore SummarizedExperiment]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.20.0"; sha256="0b9vjdal8bp7qr9wqy163idw2lijwir3wnhdaalyfag9pmml5r3v"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.28.0"; sha256="1qv794jnrb48c1ad2wc8kxs9qzjj8k8dy3h2khxrhmc3zw0npawx"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.30.0"; sha256="17lqa6k4qj5j7afbh2fnllpqbmzxh9avqh0pg3lh0cxmpyizdkap"; depends=[GWASTools]; }; + GenomicDistributionsData = derive2 { name="GenomicDistributionsData"; version="1.0.0"; sha256="1jn7aixf3by1ygd5yhqw68r6d30zj5y2rr6dpj0wmgpp0jlnxrsw"; depends=[AnnotationFilter AnnotationHub BSgenome data_table ensembldb ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.20.0"; sha256="1wk7hx6x0501k0ld2cnjf5mvjw8kf8vr23fwrfxwi2i2l3ff1pg8"; depends=[]; }; + HCAData = derive2 { name="HCAData"; version="1.8.0"; sha256="11dwnl66kyhmc9y81h8bh4pvcfa75wkhqkkisl2xm4f55ddlzlm8"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.32.0"; sha256="1zb3vx7f5zs6lxlhappiiw5cgl0adiy69d280cgqph7v16fizz9f"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HDCytoData = derive2 { name="HDCytoData"; version="1.12.0"; sha256="1l03n92i4jdfk73aw39750vc1p7x1ikl8z49v8zdg3pmk575yzw7"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.30.0"; sha256="1458b5dzdm1mq2hjblwkzy37s2yh1p3w68ya89ir60vyvzbss1kg"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.32.0"; sha256="0r62bfsamh1i200r36a0dq1lw7p92l6h8mig8g9z3m2382cyaqch"; depends=[]; }; + HMP16SData = derive2 { name="HMP16SData"; version="1.12.0"; sha256="03lr3gqshifa75xwmlbcpllplg2vjdxwbb24ycrzwjjgg14gcynq"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; }; + HMP2Data = derive2 { name="HMP2Data"; version="1.6.0"; sha256="03dgji3x3iczdig8hvmgfhqhynkdj6nc613d7n7lmzn6flwfyx0k"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.12.0"; sha256="1mrwqgx97bhff0cfdp216f2x77fid319ykk47yl4z53lmbdkd0iy"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.20.0"; sha256="15x50q5k72djhgdn53x9ch37b8mnaz7x9ps8rg29znfx0ckb6i7x"; depends=[]; }; + HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.14.0"; sha256="0r8jawshhq3jb3fx4rvxbvbgj5xgh4cffdlyf5rcr3q40xb9rbzj"; depends=[ExperimentHub]; }; + HelloRangesData = derive2 { name="HelloRangesData"; version="1.18.0"; sha256="1bcrzwakrc90d2q3hc20bqjqr9ssd2fxr1all7hfi3mx6fk9mi80"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.12.0"; sha256="1nxpdj7bzr09y4gsj8a3mkbj36z8szkg15wxs045hgg2xyik2c82"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.28.0"; sha256="12rmw0mv43w3kxc5h2d1np7ix9nmvw85lp5bc8phrd78nsbfpkyy"; depends=[]; }; + HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.4.0"; sha256="0cg1f1wkhr5ndd6hm9hhs3q4jx345a93zqylvv3casrzjcz0zp77"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.28.0"; sha256="1257dq4kfa3sdiz3lw6icvfi0q3y6k12cy1l4j0vgq3mcxw6dha2"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + HumanAffyData = derive2 { name="HumanAffyData"; version="1.18.0"; sha256="1c4kik10klfmvj5rc95ldyn58ara25w6bw5ymmgvympsql2nbj2v"; depends=[Biobase ExperimentHub]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.20.0"; sha256="0n4l01r8pmsyfi2dc7nrc4gx7r9y8lsbi2g0nifgdkj6cj2q0k4f"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.30.0"; sha256="1a8a8pb4fpzkb16rx23shx0zqqxggp5vk7dacy69z29cwih6nxc0"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.28.0"; sha256="0f19gy2k1kx5cv4glxgzn9sns465m8ml5wlsdvgmhwhbvx23qybc"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.30.0"; sha256="0f0h82yp3l1fglrqd2z1k2n5sc706ivn7n7sacx9s31ybsym2bmm"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.34.0"; sha256="0nsfz0k8ib6033g8v4lk6iwfdjdsm1jxq62s1k6sviqa0sgfdryz"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.28.0"; sha256="031d4i9agb7kpa0cmqkc0fjhxlpkm7ar674pf1lawq5pyp2vb5c6"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.20.0"; sha256="1m6h5w18rm6b4jhay03ra4h5vq0fjb8zwbz5d30sfjlxxn7d0hmh"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.12.0"; sha256="00j31za752mwcz75wgd2fv8pnrpmvjlhw2x59vscn0i9vnmf2wx0"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.30.0"; sha256="1lgv2ykqg4zr05yhihn01y1py86f7k2n0zih8pyjjd59jmsvinlk"; depends=[Biobase BiocGenerics]; }; + KOdata = derive2 { name="KOdata"; version="1.18.0"; sha256="1qmrh5p83kcy8f5n6bf4lpj26mw4mxw2zj49bklfdcbpkshyfr5y"; depends=[]; }; + LRcellTypeMarkers = derive2 { name="LRcellTypeMarkers"; version="1.0.0"; sha256="0h3x2zppfqwa9d2s7zs1b04gm9hl09mf68gy3g9by9z3g8p9fs97"; depends=[ExperimentHub]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.30.0"; sha256="08g6jdivnmigcn6gy6088g9mm0xrvzwb2y6ll389x7z4f55nlsyg"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.24.0"; sha256="0jpdqfp7n1f8iar54nv4vlssm25wbpdk2r0krax6vg6cfiy1vp56"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.28.0"; sha256="1isj8mfivaaddzv4bwmzj6rv4mjn9ng8yx200xlyhlyarasdpg29"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.30.0"; sha256="1cb7hyvf40yzaa510024jr9awqhn6cgz2cynqzc0kh8l84dcndsn"; depends=[Rsamtools]; }; + M3DExampleData = derive2 { name="M3DExampleData"; version="1.18.0"; sha256="09a2yix4pb2wjwdz23swwm7j1k4l1n71w59j61ykd37r2qnck2a1"; depends=[]; }; + MACSdata = derive2 { name="MACSdata"; version="1.0.0"; sha256="0ghplkjm4cmviajcmvjphyqycd84fqqpzj6jzpfnwv8znamjfwld"; depends=[]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.30.0"; sha256="1sq3v1sb0snlmlks0awlksqx09xjz86affm76wi1hhcpga5r8w9g"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.30.0"; sha256="14mwg96g7aza81vc3hpmb41scmygl8vnsi6s8p48c8v92106asmb"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.30.0"; sha256="0imhd75bwjyxgdbp9da0b2gqclwww7xrsbgqqpa148997il9nfrf"; depends=[Biobase lumi]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.28.0"; sha256="1qcx5aj8sw5rlfxnqgdwvx2ds2dz6vg51ci97nbxx4af67xvahin"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.30.0"; sha256="07wq7gslhrmp0n1hii3fyni63rd0cnry0rqrya6ciqa06wnrnnaj"; depends=[]; }; + MIGSAdata = derive2 { name="MIGSAdata"; version="1.16.0"; sha256="0hhs0kmcsxh80yvs0vgs41hgvjkcrjr7v56fqyvxgd43r944q156"; depends=[]; }; + MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.6.0"; sha256="173hi1s6g3n6a8ykw6lll2sc7rph1l7pfw4hyssh6fyn5pp0jxi5"; depends=[Rsamtools]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.28.0"; sha256="1qa8w99n53k8cvz2iv98q3jcbswdngkjj3crvv838fdxngm04l2v"; depends=[]; }; + MOFAdata = derive2 { name="MOFAdata"; version="1.8.0"; sha256="1imva6rlh781yd0ngby8qil0pc15i1pajg2fxwf8z6m0bwbxmqwz"; depends=[]; }; + MSMB = derive2 { name="MSMB"; version="1.10.0"; sha256="0pbfix742qslxwvpk0ibvhzmbbshz364p2kvj58hnd06brx2glxn"; depends=[]; }; + MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.13.0"; sha256="1jzypgfmd6d0fdj9ycp4jwihjpxyinr5kwi2x2dg2z6hvxx97gb8"; depends=[]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.12.0"; sha256="0v0k6s4jyk3z1v3yrin00fdchid68p0x9knvgr92mwdjj7yywd8h"; depends=[]; }; + MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.12.0"; sha256="17rcxfsjxbq50flh6w9i01abl6iw9wp35r9qibqkdm9v3pswvkzc"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.12.0"; sha256="1iww2z2p2ycc2mjpz9m1kn80jhwf8z6vsmv01n3143xg2y9vyvww"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; }; + MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.12.1"; sha256="1f4b10bzd7q3n41ihh7rhfwa1i4q8bmikd3h1kb0vjdpddyavi0i"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.24.0"; sha256="164p88vmwdhw4x1213qq17szrhh3x367d614l0dq1906yyqmpprm"; depends=[MethylAid]; }; + MethylSeqData = derive2 { name="MethylSeqData"; version="1.2.0"; sha256="148yjqgkv43906cww9qmjlmi22mklabxbkr9pdg9phq6lrvwj335"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; }; + MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.6.0"; sha256="1ljmbn3ax33npvv440ifkm7x9wg9jmakixr5hxx9h6v1q96jnrkb"; depends=[BiocGenerics BumpyMatrix ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; }; + MouseThymusAgeing = derive2 { name="MouseThymusAgeing"; version="1.0.0"; sha256="1r3f3nidgnm86f350d8yff82z4aibspkv0qyvx5mmnna89694nib"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.28.0"; sha256="08f400dmbbccgrgzib6808q6543bq9r2sji5kpj2sra671kfb1f8"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="1.12.0"; sha256="1xmqrwd8g71j6zv8nqn1c185qplbllj7y087hix15ippyvz5986k"; depends=[]; }; + NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.2.1"; sha256="1jrr0a1kgsb39b8bxjz15yhx5gzq29076pxz2dcnijvlhzhxlby5"; depends=[ExperimentHub]; }; + NestLink = derive2 { name="NestLink"; version="1.8.0"; sha256="1g3klrwjzfgm6yh5awfrp07nf8kixlnl7hvcr3yxxhqvqxfqyixr"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.30.0"; sha256="1ckrkakidfmm0aj3xs2v6az7129rqyz6s8yzqrm03w0d4kpzlan9"; depends=[annotate Biobase hgu133a_db]; }; + OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.10.0"; sha256="0glq1y90kchcagbn3yzwymvqh2c4f5b0d7w193k8drx2lh09fwj5"; depends=[MultiAssayExperiment]; }; + ObMiTi = derive2 { name="ObMiTi"; version="1.0.0"; sha256="0vl2i7js6z6jhz2lm9s78lnz7r2p2pk40w1pmg6vqk0lbp50fwj0"; depends=[ExperimentHub SummarizedExperiment]; }; + OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.14.0"; sha256="01k050znpzf49dsim85q6rc05ln7qlxpy3pw22ax27h46vp6xvv8"; depends=[rJava]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.20.0"; sha256="013sd0mqphpmlfbxsrrqq4vvbq8w66v10mngaw7fyc99h5l33ah3"; depends=[Chicago]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.32.0"; sha256="1hnnacsyas98jfnps6cfid3gdqqx6lc9rpw8adfyf0b8v3bdn4sh"; depends=[affy annotate Biobase PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.26.1"; sha256="0s9a6qixfq2jmx5nv7q8pa6c9mlscapkjh069jf1b37891shwl32"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.26.1"; sha256="12bnmdlw4whqls4ply5jhkg0aq6dam4160xl7xaabhgb6wiz3m92"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.26.1"; sha256="13822jxvc846s7gmzd47vlza2pz061954w44pspmxcjrq6r2xvy0"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.20.0"; sha256="0mcrfj80nb5ipi58g9a3dgka3sj6wrrc9ax93mqw584cqs788n4w"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.28.0"; sha256="1y1ln0zbnjh4kmbhphnvcifrw1lazrc4kci6gi07mwny3vpac6f4"; depends=[]; }; + PepsNMRData = derive2 { name="PepsNMRData"; version="1.10.0"; sha256="0bms0zin8p5znwpwq5ipcpj03a71zc9ihw9h5svqkx0hqax06x1k"; depends=[]; }; + PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.6.1"; sha256="14427azqb8cra7fa33fx69qkk5xgal71hdhnyya0lls3cpxv91ca"; depends=[BiocStyle Biostrings ExperimentHub]; }; + ProData = derive2 { name="ProData"; version="1.30.0"; sha256="0gh1f5smanp0wg3z4bc6rxqkvhi11jm3xxhyz3xikjy40qqnykjp"; depends=[Biobase]; }; + PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.18.0"; sha256="0vv5iph4qcci1zzl7946l47wgydfxv1nxqkqljx1bzp8vn64fbh1"; depends=[CAMERA LOBSTAHS xcms]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.22.0"; sha256="0r98853g1ph1by25fna8pi4hrhdz9xvkfq3bvx5fwwbg5hmc8wnc"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.22.0"; sha256="0sk90ipmgrn63f8c5sbmnafzwlra36adslg6si0dmrgkvp3disdq"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.20.0"; sha256="1665dymyglwyz7631c1qfq4wnmg5zm2q7akd36w7fhjkxcdhmj29"; depends=[]; }; + RGMQLlib = derive2 { name="RGMQLlib"; version="1.12.0"; sha256="10k7jmhgv4asmidb82a6lzmhlxqvh9fr6w1ipsif6ccaj626m1nf"; depends=[]; }; + RITANdata = derive2 { name="RITANdata"; version="1.16.0"; sha256="11cixvs9rrhklly36v93kx07wv6nknjdn0h61na0jrjdjyc1s4q0"; depends=[]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.30.0"; sha256="0xiaa4gkrrazzsrg1czd9kslrqayf9qlq8a9kp1mx67whb2wfigw"; depends=[]; }; + RNASeqRData = derive2 { name="RNASeqRData"; version="1.10.0"; sha256="046a0r4nqsh1kl88fw079ppavs3nss050mnr3xvg2256b4pflhd4"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.30.0"; sha256="18bwr7r7xdp6ygabsvgp44d8rdb1rrds05in4rj84lm34rjzcwig"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; }; + RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.6.0"; sha256="15pnk9c6b3zjr1hck62z0ljpdb7y64kzh0xmvanlg5lw38spihn9"; depends=[ExperimentHub ExperimentHubData]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.30.0"; sha256="05swvszzcjr89d30v59yqp3vm1n6qiy36497ppvhcnwz471as96r"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="1.12.0"; sha256="0ikjpvndwwin88qwhnrmfk9bcj50jfyzl0am30269ihbhb5pdrjh"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.20.0"; sha256="0fg1faahvyl1fcf4baic8b6irf7gzg2xmckmap0c6026wvl930n1"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.20.0"; sha256="1h1a1dqh701nwfdkifv1lxnfjkzszdllhpgl7kbhdzwwj3n35qwk"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.20.0"; sha256="0833kjzclk5ddmgsm0hcjjl9n1l9m4vf89h1snh0igqg73z7mvrs"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.22.0"; sha256="1paldg8wim6d4xvmzxyickzm28haz5z6h9g7k5h6s9wiqw3r0q36"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.20.0"; sha256="07jam3krlwdmsl5xk45qrv60gmkq1p5ra9jxrzi9iyf604x7591f"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.20.0"; sha256="02w438dlsvdzpa4myywhwzsczhw86lx43mw3w3m2rwgakfv1ayan"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.20.0"; sha256="1w4j4kh2c545a0jl0mdqn2fj3nspmalgf9p8693nayjgr4a5ryx2"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.22.0"; sha256="015qc579kn7640cc1p09ci67xn3kg3q9p783h949z0fdqfl90ry8"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.22.0"; sha256="1mz6c9s2q1zp8i1234svca4133q2l884p4qr7yg512qyrn5jklrh"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.12.0"; sha256="1mx8f9vb8qyrag59mhsria193pgmk7m56b4z53lsn5vxmp42f4yn"; depends=[Biobase]; }; + RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.12.0"; sha256="1bv3z1g2xabdh83zk5xa9h5xrgv4cf28di0syv63xgndqsn70vqv"; depends=[data_table]; }; + ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.6.0"; sha256="0n1p4svxhddvb4m83v9nhdgwafa0n392625kaqvz2bby87hsnz4w"; depends=[edgeR limma ReactomeGSA Seurat]; }; + RegParallel = derive2 { name="RegParallel"; version="1.10.0"; sha256="02zk2sxikyd3mi54p51dwqkz73rsnb854rg0w73kc041kjr6cs4r"; depends=[arm data_table doParallel foreach iterators stringr survival]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.30.1"; sha256="1ld4lkalpywfll2zw93flgnvbhr0djiswd7bqx1ahsy95920v75m"; depends=[BiocManager biocViews MSnbase R_utils]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.24.0"; sha256="1wwbabqd3d5lrx82qaxpc2qyxx070ir31wjjnfan0fxdy3z53a1g"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.24.0"; sha256="0x6hvz9hk6ynwkak7rzi60lm55ksq1kh4098g6xgq0n3zvgvmhw8"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="2.0.0"; sha256="0yyyv67cg50r202x5r9i9wasw4m4gqaqjaqgy0iv6v9z5hzsi5v1"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.24.0"; sha256="1wcz9jp9z2vjdmqim693ij0pgz5c7lykd2gnqpwbg23gpr1a4vlz"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.24.0"; sha256="1vdlhzwxfb2hv20bzxvnkrgpb3yi36459yjyr97375fh3lxaqw70"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.24.0"; sha256="0sajb3m10jlq9yf364ngzmzvj28rfrrbd5jwahajigln6mbsbzd7"; depends=[edgeR]; }; + SBGNview_data = derive2 { name="SBGNview.data"; version="1.6.0"; sha256="1mxn6ydd5zm4gi6dqccfify82llhc85841gbp4hgy926zk5pg2f0"; depends=[bookdown knitr rmarkdown]; }; + SCATEData = derive2 { name="SCATEData"; version="1.2.0"; sha256="0ys32g82m90lvgqrz3ryy2az6hszxv8fj2i9mnzdyp0bzrvs0pbl"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.24.0"; sha256="12yq6k20f8l92l9apij04af3xzx6i9w4pkjbj84gxi17q5p0h5za"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.38.0"; sha256="0scvy2fxzgnbq3lpqq9vhcl0ihwkf1lwk2iijgw7mvbbspq9d28b"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.28.0"; sha256="0qqqf1qj10m3l17yj6cqrpafngnzzpjl3hsa8qs9hq1x2azvg6p8"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.22.0"; sha256="1a7gcvlc1axg9m1gmg0wm6yhgyhasfzcmlilwydpkjbn9j3fs8kp"; depends=[]; }; + STexampleData = derive2 { name="STexampleData"; version="1.0.8"; sha256="07flhr3a0r6h9xrc91pqlaq9bgx7vl4b8d9l8kb5gkcwr7m0qls3"; depends=[ExperimentHub SpatialExperiment]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.24.0"; sha256="1v8q5mpplkdi8hz8i89fx5gzzhbnw32nw3vm7qv3rb84v4vs57pv"; depends=[]; }; + SimBenchData = derive2 { name="SimBenchData"; version="1.0.0"; sha256="123fi1d0y55z92mzprjizh6vgrhv0mlmm2xk9xxb6fm0z6w293i0"; depends=[ExperimentHub S4Vectors]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.20.0"; sha256="0y9axq72ssxfirfwmi6ir8z241nas3maz82m75smhj1yq7qn73yk"; depends=[]; }; + SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.4.1"; sha256="01f6ddz8x3w19hq36ym0dm4afnq94dcr68kvl5hrglarqdzlikf7"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; }; + SingleMoleculeFootprintingData = derive2 { name="SingleMoleculeFootprintingData"; version="1.0.0"; sha256="0kzs97y25sr2527pa2kqddkz0wckb727gnczipxjspmilvnp8j2z"; depends=[ExperimentHub]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.30.0"; sha256="0a4wzfss5habxn1mdwas699ff8prpylj2ybgb5dd7691zjygx07f"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.28.0"; sha256="111y36lvd518b7cn4k3025qrq77nh3rks9hz3r11k1af2y9d3p80"; depends=[GenomicRanges IRanges S4Vectors]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.34.0"; sha256="1bj4h1zjkaabv7d7l67aq58j2v2npwnspa3xg35jxzjqwcd8z459"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.32.0"; sha256="0kg29bfw144bnzxk81kiw3wfyqkdwaqgr3mqyjb3ag1kqa91rwyf"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.28.0"; sha256="0yzwyv68495zqg3cjqyxzm6zxprzy3jq6j55m2hp7wwqn1ab0sb1"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.28.0"; sha256="0qh2n7a2lrfr61lag5bshpscm3fqga4gw88zz7lvf9l8lx60fn84"; depends=[]; }; + TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.16.0"; sha256="06q2d1pba3wixdmdswci8a6my7xkwfkwkm4a5zsvyjsv9ljc20ap"; depends=[SummarizedExperiment]; }; + TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.12.0"; sha256="14j4m7h5sspp6d9dvqqmc8s7av32gsi0c463v9l1jyf33yrakl4y"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.12.0"; sha256="1gihnggazbbbg51klciwi41hrv9ygsnlx5pg4m5l21j30g8h6k29"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.12.0"; sha256="18lk6qgikk0da6wq370zynqcxx0742ys7qyd855rjjqq6g5bsdzi"; depends=[Biobase]; }; + TENxBUSData = derive2 { name="TENxBUSData"; version="1.6.0"; sha256="1phx64jiqwsv5caphbd3iarng6x6aljicwg0g97jmrd9dwzqz3g7"; depends=[AnnotationHub BiocGenerics ExperimentHub]; }; + TENxBrainData = derive2 { name="TENxBrainData"; version="1.12.0"; sha256="069wcxdwbcxfqy75yibrafqkhgc14yh3fbyn71bgdjpfsi4xrv9r"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.10.0"; sha256="05srydf84703w54sdirribdl4w2w9n3zmd5rwkv6nd5b9v3zlqzb"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TENxVisiumData = derive2 { name="TENxVisiumData"; version="1.0.2"; sha256="1jgk0xzy7gjypfbh0a6xjk34kl97b3i1j1j6f6fqq2d2fgbif2zq"; depends=[ExperimentHub SpatialExperiment]; }; + TMExplorer = derive2 { name="TMExplorer"; version="1.2.1"; sha256="15cfgkxvg53fkbzssmqjy72xbapyh4g2j3vgw1pp48jmm0n17z67"; depends=[BiocFileCache Matrix SingleCellExperiment]; }; + TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.10.0"; sha256="0gna07p2g5jm4c0hypbs2g1gbmvc72xi7y0qiw6jylac1qahnsil"; depends=[ExperimentHub]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.28.0"; sha256="110dlcvwhk7dckca8p3d83p3lz980rxbff585nxxlhy2rjw4m87i"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.30.0"; sha256="01701jcf9yq1fcxjzzgddd3ah2fxd1wafqyyf2h8k2nxg63l4wxb"; depends=[]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.22.0"; sha256="0nj68i3i6frwwqnfj72gzl2qs5iyp2wwzhn7hqvqw7s3sgl0vxjj"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + VariantToolsData = derive2 { name="VariantToolsData"; version="1.16.0"; sha256="0a4xhvvg5p9v04ry9d70wpnma2b7ba6m04k40phalc2q2l1mgb49"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.24.0"; sha256="1j8n8iaxch1cs6g3d9raaziyzvcpbp0am9awrzi8a89zbp8vw5lf"; depends=[]; }; + WGSmapp = derive2 { name="WGSmapp"; version="1.4.0"; sha256="17z3m5m53kdp2w798nh9bl5j5fff4yyfig747s17cvgd1bmcslw6"; depends=[GenomicRanges]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.30.0"; sha256="082d3y9x78la6d3ssiahkzzlwx12wir9nvm0g5aj278dfc5z509a"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + adductData = derive2 { name="adductData"; version="1.8.0"; sha256="0g6r5j7j1a0800j5mqv5bxvxd46vankhajjq39wxicw7zynsh57p"; depends=[AnnotationHub ExperimentHub]; }; + affycompData = derive2 { name="affycompData"; version="1.30.0"; sha256="1m3x8v57dfv52q2nvsn8pcb8gsb91gz8w39nkba8hf6nh27c24sc"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.40.0"; sha256="1x06nwnhj9bsbvlp1rzda67cn6g39s16hya7kinqfcllv1m7s0y2"; depends=[affy]; }; + airway = derive2 { name="airway"; version="1.12.0"; sha256="0rfx01gn7nx00yaxx737cxrvk1jncamqg0kxg1idl45p7ws12h2c"; depends=[SummarizedExperiment]; }; + alpineData = derive2 { name="alpineData"; version="1.18.0"; sha256="1j58slk6l4wxkyjm6d4axyp2hn8pivc49y8jx28rng03vxlwm386"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.28.0"; sha256="0hlyq1403pyin1fs63nplz0c4ppl9aclxbgw67wglwg7nbfiqh68"; depends=[Biobase]; }; + aracne_networks = derive2 { name="aracne.networks"; version="1.18.0"; sha256="19jgjmrnakmbhqaw7ykh8fx75zljdmcjz9nf23py9rs7xh58ykhx"; depends=[viper]; }; + bcellViper = derive2 { name="bcellViper"; version="1.28.0"; sha256="1w4d6xk1npg3h28wp2jn6z4lcwqk8cgiyxpwfzpryg8jx4h434yc"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.30.0"; sha256="1vwl6ldd5694h52jvs4827jw4byx6pmf6vlspjxp9xjr7wxn3f8s"; depends=[beadarray Biobase]; }; + benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.6.0"; sha256="04aj0cqq1l6x353bjcyc5gal27clf3j47bdagrac33p6l1f5n4kw"; depends=[ExperimentHub SummarizedExperiment]; }; + beta7 = derive2 { name="beta7"; version="1.30.0"; sha256="0knqzxbgn0ra6l2k4dwn22wvg8x2zk9skffy0slc34s6g3qryin5"; depends=[marray]; }; + biotmleData = derive2 { name="biotmleData"; version="1.16.0"; sha256="18cvwmi80jh54v40vp9iqas1afc6cqb2v2abinyyxq2mba4afmnd"; depends=[]; }; + biscuiteerData = derive2 { name="biscuiteerData"; version="1.6.0"; sha256="1d7zibjf0qccmdnzdxh7wy1h943yhnbf8zdix72486pvhzm124zj"; depends=[AnnotationHub curl ExperimentHub]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.30.0"; sha256="0jsxm78cvfbjn1360lhka7nxxiynqsnf1p2r3awgy239z93xyri1"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="1.12.0"; sha256="0wwjxhk9k4k5pwrwcmvqycfsl99hx2lwv4nykf48zc5qnbzcpchh"; depends=[]; }; + bodymapRat = derive2 { name="bodymapRat"; version="1.8.0"; sha256="162rn0mi9a0lrljxbb78l2s7n0r3bmq835vwdb8xa2sf6sywni87"; depends=[ExperimentHub SummarizedExperiment]; }; + brainImageRdata = derive2 { name="brainImageRdata"; version="1.10.0"; sha256="088f7rbp7l2914nz2wc5wz89filcwfxjpg8c9f84mvwf7glcg2y9"; depends=[ExperimentHub]; }; + breakpointRdata = derive2 { name="breakpointRdata"; version="1.10.0"; sha256="1siwcllxhk9g3hscn5d01lkla49nny9c778msgv2ybj1lng3l215"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.30.0"; sha256="15ixf8x5k63pjshylbn8jgmx7xyjn0pqpn84615q2vicf136xgs8"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.30.0"; sha256="159yhrfsjccz145iddnzc5i87gag2ngy244v77cf73y96xs8985i"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.30.0"; sha256="0gvfwg27nxk1jslr95fzzi4s3p4s4liyc7a5fyfk33ilqjg7nkc0"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.30.0"; sha256="174nq00w753clhxga5azjkllj1mm10ygig7afn7lhy2xyph30aa5"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.30.0"; sha256="1375bwvp2p436p4d7j1y93q8g7rw62160ks711f3l54xxg78q2md"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.30.0"; sha256="0skv3m5wrhhz6k9k6nxjdji9kwqkwjbb2y9q1ff6x289ivbj4w2a"; depends=[]; }; + brgedata = derive2 { name="brgedata"; version="1.14.0"; sha256="1w0ihaqdrbvgk13sf3c89bb04wdljckaw1iqx521wcisza06agzi"; depends=[Biobase SummarizedExperiment]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.30.0"; sha256="1zfwxja77hl4va6m3d377cfvlrmpr4q13n0sp9sm4g82qzhvw4v7"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.30.0"; sha256="160kw64mixan2warsb9zqdmabsjn07fgc5bgw0jb2chl616x4265"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.28.0"; sha256="0ismi8irqab4a4afg7cil5xw8i49g89sc60z2nf63krsg0pgw0cp"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.30.0"; sha256="1zrjwb1bqivlhjfkzvb96i3z4c92qh1j4fwiq0z0dmzvcz73svw4"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.30.0"; sha256="11lzf41jwb6x65i3hlcazhf1n1yskf1lxv439521sn9b05dgwvyb"; depends=[affy Biobase Ringo topGO]; }; + ccdata = derive2 { name="ccdata"; version="1.18.0"; sha256="0vganjx24b58cs4r9ixsik7rz328r31vwzcbvscpa1i3awhcf96y"; depends=[]; }; + celarefData = derive2 { name="celarefData"; version="1.10.0"; sha256="063ipjw0giy63jrm518psp0wx61hlpwdcm2b8c9546zmx9v2ig0r"; depends=[]; }; + celldex = derive2 { name="celldex"; version="1.2.0"; sha256="0vqfjlmw5gvygl3km4cpdjaklghf0a7vl23z4qgp8vsn00zn4a9b"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="2.16.0"; sha256="08czq1icisl1vgbdbr4km8gxxii198546iwwr5himrvwjfqy4vvw"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; }; + chipseqDBData = derive2 { name="chipseqDBData"; version="1.8.1"; sha256="1dfm8kl3sn6rmnnlr5kxc2b1wjy3f6kmf3m01c4c1an9lig04zv5"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; }; + chromstaRData = derive2 { name="chromstaRData"; version="1.18.0"; sha256="0lvyw3cr2bjqgziv9l95fcl63bp98zcygviwmh40mrvwfp9590n3"; depends=[]; }; + clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.2.0"; sha256="04vizbnfhk3gq8h94k804hwhpfscnpj93li5bmrjhbcp80s9lqah"; depends=[ExperimentHub]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.28.0"; sha256="0gmvlrmhyxl82akxsyrcvx6m7qwfh8gbjghgb6cy2q1a4vn9vs6m"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.34.0"; sha256="1zcm90azdzjydj2gwpbsxh4fph8lp8n5k2hmvh8nyids8kmcp200"; depends=[Biobase]; }; + curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.4.0"; sha256="0pqiympiiys7f8yna56pfywf8b0nf9w4j3yyr25iqlx81y2jzcdj"; depends=[]; }; + curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.8.0"; sha256="0qq49amcbdicdlfbsdr8wmhrl5gpk897zchsmpm5s9svrn0nbjm6"; depends=[ExperimentHub SummarizedExperiment]; }; + curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.8.0"; sha256="0jwnagwlsxi47ql35cchrsrc1wlqgv1g4rm5dwbyasq3lgsh7a9n"; depends=[SummarizedExperiment]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.28.0"; sha256="1f66avn99wxsyy1jkiljgcir8vy9wg266blmdsh0wrjlk0cb2jmx"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="2.20.0"; sha256="1gick1qkwgjgw76m99g9lxljnh2mrlawq9789h8kfp48cpdzs99b"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.24.0"; sha256="1pzlw72an1flqz0lr52diqslkxgpcrfgzzw99llilmpr40nwdb4z"; depends=[BiocGenerics nlme]; }; + curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="3.0.6"; sha256="0iiqxwq14hslalk529da459zyaq763iwl8yygancgcmhv2vhb6jk"; depends=[AnnotationHub dplyr ExperimentHub magrittr purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect TreeSummarizedExperiment]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.30.0"; sha256="1qfhwkbr884g1xgrp8d2d20d9b2c1v5pvv3kf49lypxcd7m5njzg"; depends=[affy BiocGenerics]; }; + curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.14.0"; sha256="0fr368619d75jwqjn4mrcc3dagd7hnk8xpm4y3arrn15g92wflzh"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; }; + davidTiling = derive2 { name="davidTiling"; version="1.32.0"; sha256="0yjd5myq67hgjrpxw4n1kpplsgndw43jg97ghvb1jpxfshhajs0x"; depends=[Biobase GO_db tilingArray]; }; + depmap = derive2 { name="depmap"; version="1.6.0"; sha256="1hvxq1ph9qzrm34h4wpq83fk6lchlxvw8v28l80bjkqmq43jflsm"; depends=[AnnotationHub dplyr ExperimentHub]; }; + derfinderData = derive2 { name="derfinderData"; version="2.10.0"; sha256="1xmc6b2634iff34mw08bxxgasq9s3p3yl6b4s492pcrj4jj21x25"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.20.0"; sha256="03z6m4fvf69bgqzijyn7ccagqq7kcjb1056nqc303n5l2pp0ms1b"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.24.0"; sha256="0hj7nw306pdy5nwbv5bhl8yrgh09f5jp263l8jiw8fha3vhygsqk"; depends=[Biobase viper]; }; + dorothea = derive2 { name="dorothea"; version="1.4.1"; sha256="0qhsvb88hv6rvz731rn8hjm4dkba9l575anb5vkh5lzzc088qy61"; depends=[bcellViper dplyr magrittr viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.30.0"; sha256="0vd0gaqgry2vwfh4pnqzr341dlr723w0ivlq9da85066lcyqjlmg"; depends=[Biobase]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.32.0"; sha256="0bmc53rma0mmyvj0wmzbvwdyjlzqh1wvl1225xmfqzcri8681g27"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.32.0"; sha256="0lkqkwnfn14s41hz9yvzr4ic9rmv005dljhf237rgprmjy72p2ij"; depends=[affy ecolicdf]; }; + emtdata = derive2 { name="emtdata"; version="1.0.0"; sha256="0pdsgamiipwz05wsyrd8w55y9qxjc6fpnhj8wzdapzf77f8z70kz"; depends=[edgeR ExperimentHub SummarizedExperiment]; }; + estrogen = derive2 { name="estrogen"; version="1.38.0"; sha256="02w8v7jpmb479mq944sn27zpm2hlfin7j8grpvqsqn342s7lic1j"; depends=[]; }; + etec16s = derive2 { name="etec16s"; version="1.20.0"; sha256="18kqd4l7na3kaby1bvqvhl2lrb82n8qxc42ks1103cqpbbzr2ms1"; depends=[Biobase metagenomeSeq]; }; + ewceData = derive2 { name="ewceData"; version="1.0.0"; sha256="1jl6c7xaf9w8m9v1ijx11p5788qdf0qcjjqnj811nq3pm8wf83gr"; depends=[ExperimentHub]; }; + faahKO = derive2 { name="faahKO"; version="1.32.0"; sha256="0q7z45bw9brbivgjzfw13y6qb7s9w4n5mifjzj6hlkp69m0xvdqr"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.30.0"; sha256="1qcs3rjks6q67mxs5czqn770pp818d1rdz636vqylysjscska1md"; depends=[Biobase]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.30.0"; sha256="01rdnpq1nfrmprnc0r64m9zr9f66yw4iy8s5qy4y9ssz9y48fyjk"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.34.0"; sha256="0gvn15fd88v9nf150cg8hbyg3djx2yz69q1lswi1nwhxp5vi37y0"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="1.12.0"; sha256="0g979bifyfjy27lngmqq318j76z7mwxydna50k64gld6scypdir8"; depends=[SummarizedExperiment]; }; + flowPloidyData = derive2 { name="flowPloidyData"; version="1.18.0"; sha256="07hh6haz593mgihgg6bwayajvb6w07n8sj7kpc617nkxl8fbb8ar"; depends=[]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.4.0"; sha256="02krcdh4gldqab2nl3mdqzcv0vg7jy47qn8vgkmggk6y1mq1yrpp"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.28.0"; sha256="1sh6qcx699lq1a324pm5f201ilm3wypmv862nl5271jw02c4wf3m"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.20.0"; sha256="1a6kmdzr31k5w71j5zryfwabkjlkwizs57z660v2wxh61if95nws"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.30.0"; sha256="1x7fym3mjz0r5dlw9bwhlfgp8kly8zc7bxbl4g7ybq9gaiq0w41z"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.30.0"; sha256="1ji9iklr1dryzlx9mji4gipjld4gvm7lriyyc79q72ixm2s3jhpz"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.32.0"; sha256="0yfzfcq7a7iicp221ifi96pfgbdhgk1ajmvjyl8a5zf82s8cd4vp"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.30.0"; sha256="0v2lma129ywngyg907kgdi9xrigldpv3r9kdkadvghpw3grqp0yh"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.28.0"; sha256="0d2ia0v6l6vrzk4xbq0s2gbgg2xikabjyipv4yppnf7s9lkphrhz"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.24.0"; sha256="1b6x46hn5qkm7jva8vvi83s4xzy5hg8hxgmf0v00jws39hgdqwmw"; depends=[]; }; + golubEsets = derive2 { name="golubEsets"; version="1.34.0"; sha256="1r3mxp1frb69dihdnw82vjh0scw8fd30wv5dq7cml9sihyg4dllp"; depends=[Biobase]; }; + gpaExample = derive2 { name="gpaExample"; version="1.4.0"; sha256="11z0jq3lnhpd4mkwi67g2n9yq4l6h9pxxdjrgx2pj032l8n3g47q"; depends=[]; }; + grndata = derive2 { name="grndata"; version="1.24.0"; sha256="01drlc1yrnz82dc3527axb68gpz3wqsbqxw7qngqhnwj4a4ahy03"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="2.12.0"; sha256="1ljd2z9x1b8xyrj5gf0pqh9ynnzrg1jm86ji234v9333pqm0q25n"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.34.0"; sha256="1xh5q681in2aws3w5jnh3aiji6j11l72195lfrjv7lpc94l076fs"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.34.0"; sha256="0fkmhd1518clyrkzifq0ywlg1axp8np21zwchrrg6f4vgvikdxqn"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.34.0"; sha256="1bdla019lks2bd5sgli4d0g235jyapvhsvxc6pyqp3imy59rg82i"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.34.0"; sha256="0si8kpym40wv02d54yr5d0jy16gh85mdlbgs6nm4piww6lbkqzaz"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.34.0"; sha256="0ahvw0hmx32sch47ciyca302jjh77ara9p66dzmch4k4sjxip6jl"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.34.0"; sha256="0j5r3v8fdc42z76hcglbfh1jqfx4pfwxyyafz7x2arlpg5q0snzl"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.30.0"; sha256="1bg065ahrklsyzax0909w0q8b2nwrhh4nv95pxqi6nl4gvj6vgp7"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.30.0"; sha256="0dyp8kxfihqpgps2j1xcxg8zjiggy2i4aqrnngpa8074795pi32y"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.30.0"; sha256="0swj9254b7rz6vv2bfhpj4mafawrg34irq4rfdng2ybylncsjqar"; depends=[]; }; + hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.12.0"; sha256="0yvsf8a3imyjz6a6imbbb42hs76nhgqghybpyc90izy06wbdg3db"; depends=[Biobase]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.30.0"; sha256="0n88p8s7mz13q5jl361mfzsc7ggrkdzi0i9kpgnzxdn44hgv7gfr"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.32.0"; sha256="0nac9bqqfihsaswqw73k5ybp88vz38fb8zdh40fca90zcfz47x2k"; depends=[]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.32.0"; sha256="1k48s6fqnr13pa53gm1sf3rwc3a8sx0svfmgmg9vpy5dfywdq3r0"; depends=[Biobase hgu133plus2_db]; }; + imcdatasets = derive2 { name="imcdatasets"; version="1.0.1"; sha256="1vialgy4r06kf8b2r9j0dqd0a5chzpr8n1l2v5mxwv7c4gbxqph3"; depends=[cytomapper DelayedArray ExperimentHub HDF5Array S4Vectors SingleCellExperiment]; }; + kidpack = derive2 { name="kidpack"; version="1.34.0"; sha256="1fi7nrmqk1ldics8bxdpagf6a8m662pv63vr5wyyv0kz3hc5jvpr"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.28.0"; sha256="1bnvdpn2ycpldv9b9pgm4vcrly3w9lyzh6vip35pfjf0gnjjvj7g"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.28.0"; sha256="1dcws9nwb6rf4ps84zysi1k27a4nv0nq1vw3hpa5f9jxpsqwa9xa"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.32.0"; sha256="0bgdywd3w9gfl739khm0bsib3dzy8s3682992jh6zf84qhyggws9"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.30.0"; sha256="103k6kj7a3p7fnn0cva0j1884ypbqlc88vg066d0kbnp9wzbvlrb"; depends=[Biobase]; }; + lydata = derive2 { name="lydata"; version="1.18.0"; sha256="1nxx94p15szbrhzz45c75bjs0ljl2iz2vibrjw9wqf5imzlx62fq"; depends=[]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.24.0"; sha256="0rkd14z0wajm4l82kmyjxil3ab9xhmrbd0mwm440cb3hq0m9pqa8"; depends=[]; }; + mCSEAdata = derive2 { name="mCSEAdata"; version="1.12.0"; sha256="16yx7jj9ya8b3l6ys7ndzpdpfzpkxm2jsp04bfk8jb87nh66f355"; depends=[]; }; + macrophage = derive2 { name="macrophage"; version="1.8.0"; sha256="1rqvr0l720jhm458k7vq3xhnaxdx07nd621pq0qmlf501zmjn2js"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.28.0"; sha256="1lmp14mxz1zjqpix25a25c0ydzkg4hxvdaqxn3bpdpckiwslxzik"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.36.0"; sha256="0lbw5cw9inglykf767ifc2spb3lkpnx4qrg0laylijbh7wrwp54h"; depends=[]; }; + mcsurvdata = derive2 { name="mcsurvdata"; version="1.10.0"; sha256="0ywgqqa1ha3nf1scjyw5fsr0drbal74a2zw43rlb4v943jy6wg1m"; depends=[AnnotationHub Biobase ExperimentHub]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.28.0"; sha256="1dgspwd6agzmqiwpn19xahj9c3ydghn2bxcb9p8fy383270nday6"; depends=[]; }; + methylclockData = derive2 { name="methylclockData"; version="1.0.9"; sha256="1xs3yi4b39sprlma9rnvbv4amsq04f8xzsaqkx31h9id6849axhg"; depends=[ExperimentHub ExperimentHubData]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.30.0"; sha256="163pybzsd312grniglyl8iyvch5dpx68jlx3gcnin4lsl3n7dmir"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.22.0"; sha256="1g7fhg60jl70m156cqp56pj2z54kifyay1c4vgd1cn1arws7g29r"; depends=[]; }; + microRNAome = derive2 { name="microRNAome"; version="1.14.0"; sha256="0rbnpml5a3h5rma1pmblvad1bapzzq413885zir3083r16avsr84"; depends=[SummarizedExperiment]; }; + microbiomeDataSets = derive2 { name="microbiomeDataSets"; version="1.0.1"; sha256="06h694lg6h74andvzijgjzgngwb80g1g461sm3lz9rqq7dpq1w0j"; depends=[ape BiocGenerics Biostrings ExperimentHub MultiAssayExperiment SummarizedExperiment TreeSummarizedExperiment]; }; + minfiData = derive2 { name="minfiData"; version="0.38.0"; sha256="16rshq95wsmj6cjipch8w79il2zf6krs3p1n3nybnbw206wfcg6l"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.18.0"; sha256="1gjxzzp3hy4pn79s4c0mpzkqwc1g6iwfvmd34qkkrwwbrib4cf4b"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.22.0"; sha256="0r4fr27sh8sbvn17v9n8z4lsvgcwzp7fd9xmkbs2k4bj7qy3d1ck"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.30.0"; sha256="18804aqmvsc5ncqvh872p6033aml83y9d7nwq2hsf1p0fxh47l0r"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.30.0"; sha256="1z1m3gn02qiqmhk9ib5xcv8w1ljmp4hc8s5f0sgjcw0zd7gs8blp"; depends=[]; }; + msPurityData = derive2 { name="msPurityData"; version="1.20.0"; sha256="11i1xn42fl0vdsc3b640g5k1j5lirscqcqbyw1smklpjsb874plf"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="1.12.0"; sha256="05m40zhj25mbaslsh2hl30dndvlb7jqjykksdidh1c99xhg2sxrr"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.32.0"; sha256="1l1457bhfxrny11qxmn5ylhlxb4vfy84vwhsqfk3n48yrdpss890"; depends=[]; }; + msigdb = derive2 { name="msigdb"; version="1.0.0"; sha256="1pwn1h28cg4h78p2h077b0zmydrd90dlgivislg3pcjx30c7qhm5"; depends=[AnnotationDbi ExperimentHub GSEABase org_Hs_eg_db org_Mm_eg_db]; }; + msqc1 = derive2 { name="msqc1"; version="1.20.0"; sha256="13vyr4wdzj14lx2aggvnax21b8b9zlr75l6ybkyrw8q7shpmfpl6"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.22.0"; sha256="0jyvvpqs8n08dpzd492j2amg0xsf6rcwvzrfsr8knsi1v0fw4rkv"; depends=[]; }; + muscData = derive2 { name="muscData"; version="1.6.0"; sha256="08d8j6sxrkvz5xnxcy6g4p3j6phr20lwcpvfqfqidjl4skf01zp5"; depends=[ExperimentHub SingleCellExperiment]; }; + mvoutData = derive2 { name="mvoutData"; version="1.28.0"; sha256="1p8j1fl07rp03m9gskdnll4qzbm4bp4v15rsir1nc366idibcb8p"; depends=[affy Biobase lumi]; }; + nanotubes = derive2 { name="nanotubes"; version="1.8.0"; sha256="0bl6yc62ahlafnmb6hv5064skrlv3b67npaxpc5rx1h5xsqxn5ni"; depends=[]; }; + oct4 = derive2 { name="oct4"; version="1.8.0"; sha256="1a4m6l0iwlcprhmnx6bv12s9av4bkrvhji9a1s3axz9x14bdc2ls"; depends=[]; }; + optimalFlowData = derive2 { name="optimalFlowData"; version="1.4.0"; sha256="194xfwia2zidmv7y184dnivhq4ldrfaywacg4bisl9d65rrzrrs3"; depends=[]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.30.0"; sha256="1gd8mxal0x2v8sn3m3jxd2fm73dcxmv1c6rmgbp8gkkm3av2yj4i"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.30.0"; sha256="1sx0sby9i0jffni6zcpw904m9xajvm7959vd26n4mhd3jpi98rcw"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="1.20.0"; sha256="1nwc1asikgbjadjcnlk1zl8apjwy81cz4y6qh22w5pzjk1ah1zyh"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.30.0"; sha256="17ifay8vsh9n0xfh7aa9vg2hgjbl91lx76fnzby18wjph3w0k3ff"; depends=[]; }; + pcxnData = derive2 { name="pcxnData"; version="2.14.0"; sha256="03j8bmlk0j680g5pcbfggvxyr3j94yaaxnlzmxxllzqfrnpl5phm"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.30.0"; sha256="1q59kwzsmyq8awkhk7d9klw7yfbqvxwx87yjq1k1zb53mh3ni1pl"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="1.12.0"; sha256="05gizhc2xqjfpcaqlypxha7050wm0grcwyq9fvmngij3k22bdj4j"; depends=[GenomicRanges]; }; + plasFIA = derive2 { name="plasFIA"; version="1.20.0"; sha256="1c8sbi24lbp173854viy8jh2vvp8k8aka7xwwhkz0qzp8d35fhd0"; depends=[proFIA]; }; + ppiData = derive2 { name="ppiData"; version="0.30.0"; sha256="13f2qffxcmg4r3mmiwrihrn0abl5xvklx56d4f3s0nnvzhj88p0c"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.28.0"; sha256="1n7rylqrafl8c82m4waxz5flvky64mhphk4lnnqlk512c2b3855z"; depends=[]; }; + preciseTADhub = derive2 { name="preciseTADhub"; version="1.0.0"; sha256="1n8p0rr47bndg1f0x1z5gl32iy31v0isldz1pdf7arbcnl78cwmw"; depends=[ExperimentHub]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.20.0"; sha256="085da764mlk9qb3z3d1y0j6a359hp17h880nlgnpq1h7ip9kl5an"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.20.0"; sha256="1fimj3awfc2hl0ryh7g7bkklmgr4r6kkjfci1qrnrcwbc0zvkb8p"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.20.0"; sha256="1zhmij5zdwy5gxxghy51nhjc6nn1b6jhck203ydvrk1hqa85j9k2"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.20.0"; sha256="0brkqjpz2l2c3nkc85q5inl98xyw602rj1zlca45chy537i273pf"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.20.0"; sha256="19rrrph8fmk99bx49i6a3cs95cf392ij8ccml4a6dh2mzd8bys92"; depends=[Biobase]; }; + ptairData = derive2 { name="ptairData"; version="1.0.1"; sha256="01scd1w8wji3008dgvxcv6csi2k5wlndxcrnsxdgjcd9hl7m86v1"; depends=[rhdf5 signal]; }; + pumadata = derive2 { name="pumadata"; version="2.28.0"; sha256="1dy3mywrl3zx73mp50ihx981igrgygh309mvfi927aiigjyba0y8"; depends=[Biobase oligo puma]; }; + pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.6.0"; sha256="1qjwy9dc91c9jgrrlfl9q8h6ycnmqm2gknzfdf4cnhpskz8a4428"; depends=[ExperimentHub]; }; + qPLEXdata = derive2 { name="qPLEXdata"; version="1.10.0"; sha256="09g541sz9jkk0adxy9n2ckzjkl87fl1y86i02vsz2b0b1pial53b"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; + rRDPData = derive2 { name="rRDPData"; version="1.12.0"; sha256="0jiwvf7kismx3bxw1yrp940352q7ac78lm25ibmfz3nrxy347ynp"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="2.14.0"; sha256="11dpy9r19p0zgk9y6sq0bf6fhx4amnshfh5z9ipkxnh3i68yn889"; depends=[Biobase]; }; + restfulSEData = derive2 { name="restfulSEData"; version="1.14.0"; sha256="0y4wfdrj2wj41n0fprpmswzbp27nzqbd31x1lb16z4b2id58s2vv"; depends=[ExperimentHub SummarizedExperiment]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.30.0"; sha256="1d6xs1vs9vkjz64b3v1srjizr6xqi8crfbl34yxd3lpfipp14f5h"; depends=[]; }; + sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.16.0"; sha256="1gjfpjisfznxhlsrfcd9q5isz5xcds38ky9j6xssks41jgdf9j5c"; depends=[SummarizedExperiment]; }; + scRNAseq = derive2 { name="scRNAseq"; version="2.6.1"; sha256="14954hn19p7idxdnf16jrvplg63rpfkvmcb2v9f5kqxg4jv02g7v"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scTHI_data = derive2 { name="scTHI.data"; version="1.4.0"; sha256="1pwgs7qwzaajhfqq5iyr41npxf3ivcjii40mp4w9ddgmhqw74mbn"; depends=[]; }; + scpdata = derive2 { name="scpdata"; version="1.0.0"; sha256="0adfbzpvrh6m2fa88cpsyvjvdnb7cfkb2d367n3bsc5ga0myk1dz"; depends=[AnnotationHub ExperimentHub QFeatures S4Vectors SingleCellExperiment]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.24.0"; sha256="06h3rmh1m5lr7hzkd2yqw241gaqc4wx35nz126jnq767xk0vaw6f"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.28.0"; sha256="112766y3fknrnmnv13nxzgyspw1l331x4vk2i3dfab0hg1khjr2c"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.26.0"; sha256="0vm726y6m67jc2kqqkav1j1a1irs6qz43pg4dmr6kdpslj1yyy2m"; depends=[Biobase]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.28.0"; sha256="0cf70km8virxjpz93rfvvfnzykqxvrlzgacfrksf07izj90dp6s8"; depends=[]; }; + sesameData = derive2 { name="sesameData"; version="1.10.0"; sha256="11i5mkwl5gjy7rdbrnqvinfgxba7pqvh6jrzmvgld31sjdzz8s4x"; depends=[AnnotationHub curl ExperimentHub rmarkdown]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.28.0"; sha256="1jyb6lj71dhc00fka4913zxxkd6cqmd39r4khx1bhpi7nnvf7qcf"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="1.12.0"; sha256="0q9m7ywsdqk02bnadxf2g975zy8sddw8yrjrr0rcl730jhznw5ph"; depends=[]; }; + signatureSearchData = derive2 { name="signatureSearchData"; version="1.6.0"; sha256="12s2mp4lkr47gwspqnllrkmzldr99dqqjxrqrcjl2xmzn93fry72"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.28.0"; sha256="04z4aa60546jl88kj62y0h93gh9gbdpzfm6nhxc1g8541jmarrjs"; depends=[]; }; + spatialLIBD = derive2 { name="spatialLIBD"; version="1.4.0"; sha256="17xb12gzfsjyawyzms3c9709gifsmpbr0sqgf77sjc9z60as4d4d"; depends=[AnnotationHub benchmarkme BiocFileCache cowplot DT ExperimentHub fields ggplot2 golem IRanges jsonlite plotly png Polychrome RColorBrewer S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment SummarizedExperiment tibble viridisLite]; }; + spqnData = derive2 { name="spqnData"; version="1.4.0"; sha256="1jqq9gc1s16q080p7jwjzx1jxd8x2i98gfqd0z5b321x8gsxnsqx"; depends=[SummarizedExperiment]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.28.0"; sha256="1yvj8knlabh8ydaf513iyx7109cbwrpp14h27xywrybvfijdplmz"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.32.0"; sha256="138j1lb6rk1vp11ya4ghzarpid78sc53smp68kfr2q33k24sglv6"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.30.0"; sha256="1iamafvdnadymn1jr3hwj4yxf34w7d1jvf166kzn3icjj503cl44"; depends=[]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.20.0"; sha256="0w1bwwd8pqyfvjlrx4h4mzdy2dbmnmrjxwvm9lmwgahd6b9sv5y2"; depends=[BiocGenerics GenomicFeatures GenomicRanges IRanges jsonlite remotes Rsamtools rtracklayer ShortRead]; }; + tartare = derive2 { name="tartare"; version="1.6.0"; sha256="0jw9mqqgz19k805nqjrnxlp1q6l9sfv8d0g73jaxqdrkfjicwby1"; depends=[AnnotationHub ExperimentHub]; }; + tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.10.0"; sha256="021zv61b7lnhz152aq9x2m3azxhygayjsf8m85mazn90z2n4g8nr"; depends=[bsseq ExperimentHub knitr]; }; + timecoursedata = derive2 { name="timecoursedata"; version="1.2.0"; sha256="09v8gsmqpcr9i8lrfc2jdddd75liz5mcyi9m7rxgjgwdl5dsp3gn"; depends=[SummarizedExperiment]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.30.0"; sha256="0k4y33lki9pwk914gx8h3c64fkjgy5www3rcchn6aa1sj72ar42q"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.30.0"; sha256="0rzndr203nsay6f2vqg4g34gycbwisv1m5j8ssc7mzzamc687yl7"; depends=[AnnotationDbi]; }; + tissueTreg = derive2 { name="tissueTreg"; version="1.12.0"; sha256="1f1qjc37pj2jvhrprqvy6x923646mbm23b6p27ybr4plwqya2nl5"; depends=[]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.20.0"; sha256="11zx5fwmis8nk6274shzw53b1ynqipbs4mba23hrngnb4j7syq9f"; depends=[]; }; + topdownrdata = derive2 { name="topdownrdata"; version="1.14.0"; sha256="0rawjpiqzjvzk2b1mlbz0cwml9qh75lggk60dkrdrm7nslsbwl2j"; depends=[topdownr]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.30.0"; sha256="1m12b9nagrrl1hc566543bqsc07wp1b9c73gb046ljqnzyyhkp4k"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.20.0"; sha256="0y4nx3rnd45d3mmq6182q5xssr6xf6hr4ad7zk64q9s1y9h9gv3s"; depends=[]; }; + vulcandata = derive2 { name="vulcandata"; version="1.14.0"; sha256="01b0ds1c9mmmrxf7miavjqqmh04b58ps3chf9s9la1wnrshmcq9z"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.32.0"; sha256="0g77r5dblag38nlh5r1aj5n5vj9smi5509y28j0bmr47qwpmadch"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.38.0"; sha256="0ypw7bsd0pjfkfgdphzz5ivr43h3c2c91xg8szq4m9rx3aqa7pa1"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.30.0"; sha256="190vf8c8qg3khpv28w43l4c7p92rnq7qbfh2z2qbr73y4nrmwnj4"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.28.0"; sha256="08w41bf6xzf18q1088dvc0zcqgdrv9x9sbvxbmx2r68jwn8vcv7i"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.30.0"; sha256="0iam9nlfcil9wq782pg2dj5m2hcw3607mhda161r8bc57ddndlp6"; depends=[]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.12.0"; sha256="0541flrnrpz3k8ldi2hspi5gyxk3zc6i7vvk12dgs67pp8g3pwjx"; depends=[]; }; + } diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index f1062de1e9d..7bdac0c5045 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -4,1934 +4,1992 @@ # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix { self, derive }: -let derive2 = derive { biocVersion = "3.12"; }; +let derive2 = derive { biocVersion = "3.13"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.20.0"; sha256="0i0214ap9f6lnyawdgcdsds6g3g9qqji3wbn6ln6rs698gjs9w9c"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; - ABSSeq = derive2 { name="ABSSeq"; version="1.44.0"; sha256="0dmkr4qf98r4f9h8spd1q7yblas6xhq8xwkswl4w8rza4mmhgn5x"; depends=[limma locfit]; }; - ABarray = derive2 { name="ABarray"; version="1.58.0"; sha256="0jz9gm8d5nhxklb5g3jqwwwqdhja9bmih4h3fa9rbwz13rdlzg36"; depends=[Biobase multtest]; }; - ACE = derive2 { name="ACE"; version="1.8.0"; sha256="103m3xl8i977vjnmsh14nr92lrwar9a0i0rlmg06fiqbs1m9hqj3"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; }; - ACME = derive2 { name="ACME"; version="2.46.0"; sha256="0rzbmnx6hg0wmcbm15k4nwh3ds51kp3l1jghm0lkwbzgdgcn067v"; depends=[Biobase BiocGenerics]; }; - ADAM = derive2 { name="ADAM"; version="1.6.0"; sha256="0dncdry5185f05gw7n9afrmsy73ilwpknbcs5pb2chwjpjdvqd5d"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; }; - ADAMgui = derive2 { name="ADAMgui"; version="1.6.0"; sha256="1vhj0mrdg7b1dkyrlw57jkf4b695c3wnfa00af1146zpdhcz0dxm"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; }; - ADImpute = derive2 { name="ADImpute"; version="1.0.0"; sha256="0v9bn1plyk22kncx7yqgs6bgmvy0wkpdqx88n8p7iz2zsaxg9ywb"; depends=[BiocParallel data_table DrImpute kernlab MASS Matrix rsvd S4Vectors SAVER SingleCellExperiment SummarizedExperiment]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.30.0"; sha256="0rglihkj0dr5h2wsckhkv0d0daljija82dzdf7dcyw7bi1x081cj"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; - AGDEX = derive2 { name="AGDEX"; version="1.38.0"; sha256="11gj5k78br7vdqzkx3yxh56lzdhig3mq3a9jp73yzvr7injl3y05"; depends=[Biobase GSEABase]; }; - AIMS = derive2 { name="AIMS"; version="1.22.0"; sha256="0746wjy07gdr19plyz0irnyprv5azzdm31s70h12xlgxsiqfpcpg"; depends=[Biobase e1071]; }; - ALDEx2 = derive2 { name="ALDEx2"; version="1.22.0"; sha256="06n9ks7dqb1382js7lzjr5fvl87z20k69gwm0vhyb0zi1wadllds"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment zCompositions]; }; - ALPS = derive2 { name="ALPS"; version="1.4.0"; sha256="0bd8s6sb7zfhmgram2hnay7h72rd14gg3szjv5rckflpmywijblq"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - AMARETTO = derive2 { name="AMARETTO"; version="1.6.0"; sha256="0mn1rj8av3dwjspr9vm3a2gqhc0lwz4p62h347sa2slfs0wfiqzn"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; }; - AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.16.0"; sha256="1mdw6yss3bdz1pbh7y6x5dckmhg3dnj75y5kwlmlw2wn0m0ainb5"; depends=[]; }; - ANCOMBC = derive2 { name="ANCOMBC"; version="1.0.5"; sha256="0yn1g4fmshap9ms8ajdq4shpwn1bkri4czwphq0svhsf5lbl5br0"; depends=[MASS microbiome nloptr phyloseq Rdpack]; }; - ANF = derive2 { name="ANF"; version="1.12.0"; sha256="09g199khn5m2v2f99r51aj6jgfi830rfqxajfclpq6jnq8krv5zv"; depends=[Biobase igraph MASS RColorBrewer survival]; }; - APAlyzer = derive2 { name="APAlyzer"; version="1.4.0"; sha256="1x1j1y4wbbqfm01n34lbcx9k3jsq23pwyps62cpdwbgzmzbaaz29"; depends=[dplyr ensembldb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel repmis Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; }; - ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.30.0"; sha256="1ximvi0jbwmymx6iy70qfyr9j26x5arlarra9fzs5hq05jif6q95"; depends=[ARRmData]; }; - ASAFE = derive2 { name="ASAFE"; version="1.16.0"; sha256="0ziwi9gdzn107pbvv31cmigi7c772aqyxmrdsx888xwjdfsnrc82"; depends=[]; }; - ASEB = derive2 { name="ASEB"; version="1.34.0"; sha256="0hcvmzjf8yrjqkckc9b4y2g9sr1c5gl2wz0cbg5vjdsckccjxai6"; depends=[]; }; - ASGSCA = derive2 { name="ASGSCA"; version="1.24.0"; sha256="110xsk71ljrsizhyz79facq87hwf5p5qyyh68apn37nnk9yiy24a"; depends=[MASS Matrix]; }; - ASICS = derive2 { name="ASICS"; version="2.6.1"; sha256="00rppx02bjn9wb7cmhmv4md32ghp30w6izxg42gqv56acxgiyhy6"; depends=[BiocParallel ggplot2 glmnet gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; }; - ASSET = derive2 { name="ASSET"; version="2.8.0"; sha256="0hjzkdz2pvayfkbkgbizcs6j68hbww1qbjsgg4q81lpnh9j4qpv5"; depends=[MASS msm rmeta]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.26.0"; sha256="00205kp1xfq5pbvd4b7gc658f6pqph9rqyrgxgg54bvdzwn5s4nj"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; - ASpediaFI = derive2 { name="ASpediaFI"; version="1.4.0"; sha256="0xhzf1vrpshfkzz9a65lgv1ikrhd0wq0wm756rw70hckpb8c43v3"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix mGSZ reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; - ASpli = derive2 { name="ASpli"; version="2.0.0"; sha256="0kg6rspbyxm5hc5plmysvjqip31w4czzl0jnbnvb151n2kjqr44g"; depends=[AnnotationDbi BiocGenerics BiocStyle data_table DT edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz htmltools igraph IRanges limma MASS Rsamtools S4Vectors tidyr UpSetR]; }; - ATACseqQC = derive2 { name="ATACseqQC"; version="1.14.4"; sha256="04sn0zl4m60i5jvqz5rmhc4qwcgrhk6rhznrygmm93k9v363mbn9"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; - AUCell = derive2 { name="AUCell"; version="1.12.0"; sha256="0ibsf3nid27hipr03z7phh0yzwfj8bqza6n6g7wfghpls4l12ipx"; depends=[BiocGenerics data_table GSEABase mixtools R_utils S4Vectors shiny SummarizedExperiment]; }; - AWFisher = derive2 { name="AWFisher"; version="1.4.0"; sha256="03241iicl80yxzn1nqrhna52i9wp5gpfvz3m5qc68jbh7k07nj68"; depends=[edgeR limma]; }; - AffiXcan = derive2 { name="AffiXcan"; version="1.8.0"; sha256="154ssc5fqf3r095laimf6194f8dp3gjw26g6npak94pxfbzl2v1m"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; }; - AffyCompatible = derive2 { name="AffyCompatible"; version="1.50.0"; sha256="0pcs51miy45bky26i1d4iarbjh569gssb5g4fr26bzgjmq19yl7x"; depends=[Biostrings RCurl XML]; }; - AffyExpress = derive2 { name="AffyExpress"; version="1.56.0"; sha256="08n06gynnik9vg28gnnn059wjgnx2zwvlcfwsllfv01h0mc3r0mn"; depends=[affy limma]; }; - AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.36.0"; sha256="1vgc6fj3v6q40ik56ck88f69k273bsbbgrk26jd1cglf77gq0crb"; depends=[affy]; }; - AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.40.0"; sha256="0rwdadrgjjkzfn6h0jxrwz8gvng5ynka9fd2hiv7llxvyl04s7r1"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.28.0"; sha256="1hk08kwxjlg2jb59bwv9fbc446pyf6knkscfj757nl6yjf11akbl"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; - AlphaBeta = derive2 { name="AlphaBeta"; version="1.4.0"; sha256="0nc3f6c5kfw6j11afi47ma2w93fi9yka6l4kwqgksi1zvbkn52sw"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; }; - AlpsNMR = derive2 { name="AlpsNMR"; version="3.0.6"; sha256="1r4fq7ciwz5ipfbsgj1sjdxam06wms7dbnqbx9xrima6wnpcqj6y"; depends=[assertthat baseline BiocParallel dplyr fs furrr future GGally ggplot2 ggrepel glue htmltools magrittr matrixStats mixOmics pcaPP plyr purrr readxl reshape2 rlang rmarkdown S4Vectors signal speaq stringr SummarizedExperiment tibble tidyr tidyselect writexl zip]; }; - AnVIL = derive2 { name="AnVIL"; version="1.2.1"; sha256="10xx1x2fj0df0ifixj54q2knzj4qqdwaqji6gpbz90c9bbnklxxk"; depends=[BiocManager curl dplyr futile_logger httr jsonlite rapiclient rlang tibble tidyselect]; }; - AnVILBilling = derive2 { name="AnVILBilling"; version="1.0.1"; sha256="0k8xjanmyvmhy8vpjxxhk7ml6053kxf25n5lrswfxa0xdv52ij9n"; depends=[bigrquery DBI dplyr DT ggplot2 lubridate magrittr plotly shiny shinytoastr]; }; - AnVILPublish = derive2 { name="AnVILPublish"; version="1.0.0"; sha256="1lfn04m54x1yyv51rz5hc3hzwv5lgg2kw2bjqml6s7hkjab86yaa"; depends=[AnVIL httr rmarkdown whisker]; }; - Anaquin = derive2 { name="Anaquin"; version="2.14.0"; sha256="0x09iqpxxp9cwjcz04q33k9alalj9mh2d7ffmwsjs52vsy4j44fa"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; - AneuFinder = derive2 { name="AneuFinder"; version="1.18.0"; sha256="1j2n6i3ja63i98y1mbb8ndn6cn2a0pw97zz6al4myycnv55w49j3"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; - AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.52.0"; sha256="0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; - AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.14.0"; sha256="0npk0laa2rc93rsh6yikj886zf2fl53a050j07fj9w67j0q0h3s9"; depends=[GenomicRanges lazyeval]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.32.0"; sha256="0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; - AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.40.0"; sha256="0xsm7741zm81bi4c9hy0zaacnk8a6bahdpc6srqzrbsz0pfzdyhr"; depends=[AnnotationDbi DBI]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.22.1"; sha256="08d7m0n4jkpajsj0bvi5xd4vi1zqczl6lnrh8kqi2fbjkrvwdqp5"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.20.2"; sha256="072452wzvjgjsgwfz0psbl67jzfhfy2ikvawwwyraxrpyhaqkzns"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.50.0"; sha256="1zcmlw5lrk52cp54jmc8k9m8fb56k29qxqg2dsbg14n8xjxb79j2"; depends=[Biobase limma oligo XML]; }; - ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.40.0"; sha256="1vpaix450z3amm2sfrhax3as82ww9kfdlpbs5zydr8hr8r0zpimd"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; - ArrayTools = derive2 { name="ArrayTools"; version="1.50.0"; sha256="03skzhjv17fpx1bkgxcbl0yn9dilbarpwib7l537i21nc5xvzgrs"; depends=[affy Biobase limma xtable]; }; - AssessORF = derive2 { name="AssessORF"; version="1.8.0"; sha256="1r9yzkj3am1cwhaaj9v5dr1lm6lzxy6v7y58n7jxb1njvzp1hi5d"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; - Autotuner = derive2 { name="Autotuner"; version="1.4.0"; sha256="13x8n6q4cpbmmzb1638fz75y1rxgr15lzpdm3v0nn90cjsqay7fx"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; }; - BAC = derive2 { name="BAC"; version="1.50.0"; sha256="1i1h09jrsqwk7cak6cz3flrczky68216rdmh15alxjnnzqgqnswp"; depends=[]; }; - BADER = derive2 { name="BADER"; version="1.28.0"; sha256="1bdxl5lkipjgd5rxlrjcj5zx79niv1j8n53h8myimmab64dhhhdq"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.30.0"; sha256="0j60d3p05fkjq1q36yxyjcxbd8xcclg5ahb78skyp63gkpqys20q"; depends=[Biobase breastCancerVDX]; }; - BANDITS = derive2 { name="BANDITS"; version="1.6.0"; sha256="19dnnhn05vmryq04majml119imx75c6dy0g9kc6w68vqaav6lvln"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; }; - BASiCS = derive2 { name="BASiCS"; version="2.2.4"; sha256="0pjqn6ngischav8a4fm1gr1wvkgy7kl8aw9z80kkyji8iacmwzzy"; depends=[assertthat Biobase BiocGenerics BiocParallel coda cowplot ggExtra ggplot2 hexbin MASS Matrix matrixStats Rcpp RcppArmadillo reshape2 S4Vectors scran SingleCellExperiment SummarizedExperiment viridis]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.20.0"; sha256="0gza7i6xdqa0i58c1f28764l438yglvhigc7wkczcjch4cqrns4x"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; - BCRANK = derive2 { name="BCRANK"; version="1.52.0"; sha256="16ayq8igxsymjrblnwz17x32sgygqqysqs4pw2q59kibzaaav27a"; depends=[Biostrings]; }; - BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.8.0"; sha256="1lbd6lvk78s9hnpg7sxfk9r3p7h323qqjvamqrnlh28v6v3pwlkl"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; - BEARscc = derive2 { name="BEARscc"; version="1.10.0"; sha256="1iaq3vx1g38dsfv67ivrsxgicjbv9lq8vsj8zqv8pi9mdradrlv8"; depends=[data_table ggplot2 SingleCellExperiment]; }; - BEAT = derive2 { name="BEAT"; version="1.28.0"; sha256="125rk0vdakcz43x2lz6gszy95x5nw0x5gk5jxclj2zj7wxsaj2p2"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="2.6.0"; sha256="0g3cdhj4nwjhz9l3cail62j60l9mjpcxp9cfj0dvvy8awnaj4rvg"; depends=[abind BiocParallel data_table futile_logger Matrix outliers Rcpp Rdpack]; }; - BGmix = derive2 { name="BGmix"; version="1.50.0"; sha256="0r9gjqajarg5mivxhqdzn8m8hmfarmzbplp3zqyyznccri03pv50"; depends=[KernSmooth]; }; - BHC = derive2 { name="BHC"; version="1.42.0"; sha256="1n2rkbj8j10f38d40wvi6mwjxnrlfx71a48ab07bp2s0hwhxd7yn"; depends=[]; }; - BLMA = derive2 { name="BLMA"; version="1.14.0"; sha256="15x8lz959iblapj4qh47p10b631qmqnhpbkwyzjhh8hwnwxwwnpv"; depends=[Biobase graph GSA limma metafor PADOG ROntoTools]; }; - BPRMeth = derive2 { name="BPRMeth"; version="1.16.0"; sha256="0gdrrmskla2rf3cadf1r785d0ph0zviklprfb85cgwvjf64vnq09"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; - BRAIN = derive2 { name="BRAIN"; version="1.36.0"; sha256="0srrbr8x498z6mcpz155kl23y07pjnb4nk7i8vysyi2330dlc0wb"; depends=[Biostrings lattice PolynomF]; }; - BRGenomics = derive2 { name="BRGenomics"; version="1.2.0"; sha256="0szxzx6dbbfyjg543mppzywgqnjrx2wzsrzv58d5f9bbjkh6gmj0"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - BSgenome = derive2 { name="BSgenome"; version="1.58.0"; sha256="1gbvmxr6r57smgvhqgwspbcnwyk4hsfkxkpzzcs6470q03zfb4wq"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; }; - BUMHMM = derive2 { name="BUMHMM"; version="1.14.0"; sha256="02bn5z8gr64zh7viqd8sbpcj16j48rpycdlvj36qq7dcijnh7mby"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; - BUS = derive2 { name="BUS"; version="1.46.0"; sha256="0acqznbg84m78cqdl3hspk4rnlhg6y2w5j0xk8vyq6pd8a216c3w"; depends=[infotheo minet]; }; - BUScorrect = derive2 { name="BUScorrect"; version="1.8.0"; sha256="1kwqyqy9rrdpdxh5za68qzi5w8b4r8c2ag0wmliisy6bq13hxrqc"; depends=[gplots SummarizedExperiment]; }; - BUSpaRse = derive2 { name="BUSpaRse"; version="1.4.2"; sha256="1v6arpmh0lalklr4y7kwxi1x89xwv86kh62wd2h1p583fhd8407q"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; }; - BaalChIP = derive2 { name="BaalChIP"; version="1.16.0"; sha256="1ixks2km3ia46r3vrdjaylac3wwnl1bz5kmsynxapa1aj7658ppk"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; - BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.18.0"; sha256="1zrbcindd71lqq04f7n9id53gcvysl3f61s5j9sfvjawz3asbnfr"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.34.0"; sha256="01s9njrf4bplqh1agb2awy2vwm8lkhp17yxwni9xasask1ivbw2h"; depends=[RCurl RJSONIO]; }; - Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.26.0"; sha256="1a0fybmnjxk4sh66la52z9an5l8n4726yhm33scmvq7ygq25xinw"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; - BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.18.0"; sha256="0s1nnydpgvy0cspl4ls842xwdgzjpddpwrs5j6ndwi6kv2jxp9d0"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; - BatchQC = derive2 { name="BatchQC"; version="1.18.0"; sha256="0rzb63xbkzgyxzfi82jm29z37cvw3jf29z5g4vm1fswzyzs7bcr6"; depends=[corpcor ggvis gplots heatmaply knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; - BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.16.0"; sha256="0q9l0avwjhzcq140620q8lbpwxp0kw2wkw1shpnmwcv7dj6v5ilp"; depends=[Biobase]; }; - BayesSpace = derive2 { name="BayesSpace"; version="1.0.0"; sha256="1wzj2scx99r3vy5jp8fj8cyp9fzz17zican7a2b2l7z506hq11v7"; depends=[assertthat BiocFileCache coda DirichletReg ggplot2 Matrix mclust purrr Rcpp RcppArmadillo RcppDist RcppProgress RCurl rhdf5 S4Vectors scales scater scran SingleCellExperiment SummarizedExperiment xgboost]; }; - BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.42.0"; sha256="1sad6wzwdxb1hva2kws2nsq5a15jqwqlx17b17fmsamdl7zr68af"; depends=[]; }; - BgeeCall = derive2 { name="BgeeCall"; version="1.6.2"; sha256="0mydw0smrszzlnqw14n9rcj9l48yv7caj1hjcgjg02kxqf0ravw3"; depends=[biomaRt Biostrings GenomicFeatures jsonlite rhdf5 rslurm rtracklayer tximport]; }; - BgeeDB = derive2 { name="BgeeDB"; version="2.16.0"; sha256="0jfwmmalsbh1321yj19zn1ax93ymvjcxfka5fq39la15j74j2hdq"; depends=[Biobase curl data_table digest dplyr graph RCurl RSQLite tidyr topGO]; }; - BiFET = derive2 { name="BiFET"; version="1.10.0"; sha256="191m1xhsj4l64rrh67hqiz1rdkfhw0gfd5aymf3x0xm710l3rh4a"; depends=[GenomicRanges poibin]; }; - BiGGR = derive2 { name="BiGGR"; version="1.26.0"; sha256="1hlsnss6071ck4ky1akxp1dnv3vmd8f85drdziqmm4nc2dfrr14y"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="3.22.0"; sha256="1h9zjjd5krsjpbxlmsbzwx7kbishn0z6mpm8zmrcpmbfrprp38qw"; depends=[igraph Matrix slam tsne]; }; - BiSeq = derive2 { name="BiSeq"; version="1.30.0"; sha256="0lfj7nhkl6djf55piq52fhl5zw05r0r5dzxzd1l7xhzfnjyrgxns"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; - BicARE = derive2 { name="BicARE"; version="1.48.0"; sha256="1np3967rjx54hbjsynvya75lcsqa6zic6frw5fjwqybwv2pzzw2k"; depends=[Biobase GSEABase multtest]; }; - BioCor = derive2 { name="BioCor"; version="1.14.0"; sha256="12slrdn98h43j3y7klk3chrwa2ycwm4krhz3l3kfzbxr834mhy19"; depends=[BiocParallel GSEABase Matrix]; }; - BioMM = derive2 { name="BioMM"; version="1.6.0"; sha256="0386j0nsixgxwr70qblzllr04m4fllypyximd9py2a04b5jxqcl3"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet imager lattice nsprcomp precrec ranger rms topGO vioplot xlsx]; }; - BioMVCClass = derive2 { name="BioMVCClass"; version="1.58.0"; sha256="0ndpy2cyf9fpppxax3vbwgmva5f3w7h92gzgklsdq9vxfrwvmb6z"; depends=[Biobase graph MVCClass Rgraphviz]; }; - BioNet = derive2 { name="BioNet"; version="1.50.0"; sha256="1nl1yx6q44rn8fjjdb1krp8090bkiivaj6javpynpsva0alxydix"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioNetStat = derive2 { name="BioNetStat"; version="1.10.5"; sha256="1idj1xcvnv2x3lyvvdb7lzzcx87c6z3cirxr79kl1531wn9wd5sk"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr markdown pathview pheatmap plyr psych RColorBrewer RJSONIO rmarkdown shiny shinyBS whisker yaml]; }; - BioQC = derive2 { name="BioQC"; version="1.18.0"; sha256="1l6lss9vic01vh43czsb5c1b5125356fj72yvfxcrazladyswpar"; depends=[Biobase edgeR Rcpp]; }; - BioTIP = derive2 { name="BioTIP"; version="1.4.0"; sha256="05qkmm2iylv30vy5hwdlafw3913flp3r9s4dbx281qqc45fmvy9m"; depends=[cluster GenomicRanges Hmisc igraph MASS psych stringr]; }; - Biobase = derive2 { name="Biobase"; version="2.50.0"; sha256="11kgc4flywlm3i18603558l8ksv91c24vkc5fnnbcd375i2dhhd4"; depends=[BiocGenerics]; }; - BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.52.0"; sha256="03n49b6fvyyzmvdy4yif3cl7yv21c09c8xdx4cvvax5zz4v4sab1"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.26.0"; sha256="1hyncn9zqj432da95k86rm5b28nbwrvzm52jbhisifkxj1j43cib"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; - BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.2.1"; sha256="117ypchb6r3jg7k0pq3fpsgllzw4xsrfy072ay9mqmyrm99lkn0p"; depends=[dplyr httr memoise readr whisker]; }; - BiocFileCache = derive2 { name="BiocFileCache"; version="1.14.0"; sha256="0r032a033636bxap0vvb02jvjqiynzj9npqd8603qnwmhvvfi5z1"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; - BiocGenerics = derive2 { name="BiocGenerics"; version="0.36.1"; sha256="0x8cllriayrs99wd5l003iq6i28rb1mci23qcn13ga85578f5lz5"; depends=[]; }; - BiocIO = derive2 { name="BiocIO"; version="1.0.1"; sha256="06gg5ra3r7q4b6mz14c2s9d453cnh1lxh517ffl9f8dr8vwv5s18"; depends=[BiocGenerics GenomicRanges RCurl S4Vectors]; }; - BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.8.2"; sha256="19gyl917lf5ydy5hgj0hnc388rw5sbj83awav9js2yr2zmbgn4d7"; depends=[BiocParallel Matrix Rcpp RcppHNSW S4Vectors]; }; - BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.10.0"; sha256="1jwp0gww2xyx8qfv5h4y0v3g66mmlyrd1v64xn91si4fsymk4108"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.24.1"; sha256="1iryicvmcagcrj29kp49mqhiq2kn72j4idj380hi9illmdrg9ism"; depends=[BH futile_logger snow]; }; - BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.8.2"; sha256="18m816mh1ic0znp38wax8xppai77lkym3w84x4x30x2mf0vriqfw"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr rappdirs RBGL readr rex rlang rvest stringr tibble tidyr tidyselect xml2]; }; - BiocSet = derive2 { name="BiocSet"; version="1.4.0"; sha256="16pjg09i0j5qk9s9qzm6fq5q0bgwb4wgqvp6scs06ajgrr07qjqg"; depends=[AnnotationDbi BiocIO dplyr KEGGREST ontologyIndex plyr rlang S4Vectors tibble tidyr]; }; - BiocSingular = derive2 { name="BiocSingular"; version="1.6.0"; sha256="1hczix1h14d19hzcsngqkqqnqkprs41phzlcird8haxnw9bs03ni"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors]; }; - BiocSklearn = derive2 { name="BiocSklearn"; version="1.12.0"; sha256="09v30d2ikakf89kyhsgq6zb6ac1psk19k649n3jin90mb13c5vz2"; depends=[basilisk knitr Rcpp reticulate SummarizedExperiment]; }; - BiocStyle = derive2 { name="BiocStyle"; version="2.18.1"; sha256="0rsxyna4dd99x42vc82mlkxx774vb9375llpakg53max1hhwkrqp"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; - BiocVersion = derive2 { name="BiocVersion"; version="3.12.0"; sha256="1cj9swyf4zbkdq45bhw0kymh2aghkwimxjlfj5r2j7kdiyh6n3rk"; depends=[]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.16.0"; sha256="0lvckdy20bhgyhqbccp0rdfi2p6vvip694r27qwpyi5092nfmqh6"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; }; - Biostrings = derive2 { name="Biostrings"; version="2.58.0"; sha256="1rbqhs73mhfr1gi0rx28jiyan7i3hb45ai3jpl1656fnrhgjfxq5"; depends=[BiocGenerics crayon IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.34.0"; sha256="0rs9n1w23qrs1rci3a369z4m5sxai29vxzj2yc3pavff43whb4sl"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; }; - BrainSABER = derive2 { name="BrainSABER"; version="1.0.0"; sha256="0ynk4aryshidp4i698sh2mqg2p9ayn96q5qzxrgbl7m1xsdpx6cj"; depends=[BiocFileCache biomaRt data_table lsa S4Vectors SummarizedExperiment]; }; - BrainStars = derive2 { name="BrainStars"; version="1.34.0"; sha256="0y3bnyi0ky2hrlc7m7shai2p64rigbqmvy6xy514ww3rsf5rmdyb"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="2.0.2"; sha256="04plq6xm7fiwilbdym7jrhfgr9kbszksl85qip12b5h9f8gvjdq6"; depends=[curl rJava]; }; - BrowserViz = derive2 { name="BrowserViz"; version="2.12.0"; sha256="11ivxmicxkk4kx0w1dhcb44mxa9zn0lcqy6gj4166wbc0jg93dbx"; depends=[BiocGenerics httpuv jsonlite]; }; - BubbleTree = derive2 { name="BubbleTree"; version="2.20.0"; sha256="1kgnndqq6gsvgmh4v5lddnq94d9vcvwhvdy1834k6jn3q44s021z"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; - BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.54.0"; sha256="18k45dx13nymv4xfld6gzjd2ym04k0gkx201f9rqnw80cwh2da5c"; depends=[]; }; - BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.54.0"; sha256="1jaf76fiz18hfg5dp5jhb91d8i72lz3nqgpq1xdll690sqj1lvak"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.26.0"; sha256="12pwc2s0amzzs2gidl11vqh31a1mvp0cjifq4rgsnj105y8vlpm3"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEfightR = derive2 { name="CAGEfightR"; version="1.10.0"; sha256="10jd5l3szji7qqvla9ldmapbfhvf0h7f0dpgn5gzpfqqnq5cn3rw"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; }; - CAGEr = derive2 { name="CAGEr"; version="1.32.1"; sha256="0maiblqf4r2drvdwhhs10y2hkn07byn4bmv435kz0fwx9wx197i9"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; - CAMERA = derive2 { name="CAMERA"; version="1.46.0"; sha256="015mxv3xiy1z48y40lrjfwgv87cvmgzf3xr6s0bgxd7brvxy0714"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CARNIVAL = derive2 { name="CARNIVAL"; version="1.2.0"; sha256="0ybsbfxrjpdhv4y234ajfnxdqc073y7vfyhhbilhxf2949vc4m4s"; depends=[AnnotationDbi Category doParallel ggplot2 igraph lpSolve readr UniProt_ws viper]; }; - CATALYST = derive2 { name="CATALYST"; version="1.14.1"; sha256="04b5kcvkfiw4ina11x3qf5kwrb7056zihm7xp1919bqm8k7nl3mn"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra magrittr Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; - CAnD = derive2 { name="CAnD"; version="1.22.0"; sha256="0x958rd0gxzr07bkvy0gfncc5iiinkgp86knjj7my1bnba9kp95s"; depends=[ggplot2 reshape]; }; - CCPROMISE = derive2 { name="CCPROMISE"; version="1.16.0"; sha256="07q65fjvh9ffkk0mqwl15x0c2j4rrhafw8wv8y5ikwrjv6d6ryr0"; depends=[Biobase CCP GSEABase PROMISE]; }; - CEMiTool = derive2 { name="CEMiTool"; version="1.14.1"; sha256="1d159fyynq5ng9dm36zahc17akaq5nr1gps3i151jwargq292ifz"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; - CFAssay = derive2 { name="CFAssay"; version="1.24.0"; sha256="0186ibfk56czyq9idi6sb0r1482fpgbz6gnn4v0iz0lp4fd3z4bi"; depends=[]; }; - CGHbase = derive2 { name="CGHbase"; version="1.50.0"; sha256="10zhjmls3f63cj0bnywjb97zhrj7x3xsq6yjhvf5cclxc4kcrcx4"; depends=[Biobase marray]; }; - CGHcall = derive2 { name="CGHcall"; version="2.52.0"; sha256="1a6k87xfm79wnsc30k5aziakv51h4dd9zqw81q8bd72hc3fpz8ba"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; - CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.44.0"; sha256="0nydcclli5hblni96hjgkb2llj2lx2xcdvc2jsb3rs2f37awlbvn"; depends=[Biobase CGHbase CGHcall]; }; - CGHregions = derive2 { name="CGHregions"; version="1.48.0"; sha256="1kmppvhvzky913yh1ma4fsrf0rlld3wl32k5q16i7z2sj1gkrb8h"; depends=[Biobase CGHbase]; }; - CHETAH = derive2 { name="CHETAH"; version="1.6.0"; sha256="0j1n9jr887yvvb9xi1i9bklpmb8ji0ldss5ab1q1lp75bpgwqygv"; depends=[bioDist corrplot cowplot dendextend ggplot2 gplots pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; - CHRONOS = derive2 { name="CHRONOS"; version="1.18.0"; sha256="05qpk3qd5khmskqzvjjgizfz1qwyg41lndbcdgif8irwf4xmnqs9"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl rJava XML]; }; - CINdex = derive2 { name="CINdex"; version="1.18.0"; sha256="07z46w4ifip7mwzv6866n9l477hf5fvjr03fq8r8pq0qwygci8sa"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; - CMA = derive2 { name="CMA"; version="1.48.0"; sha256="0wzf32cg34l7hazc6qlsy3ra8b9lalxi8fj36s6flqn0f7bzya1n"; depends=[Biobase]; }; - CNAnorm = derive2 { name="CNAnorm"; version="1.36.0"; sha256="1ng5hznlmp02y75g05c7a6zj2d1pdjbdnah798b0ng3ckqw5hq1p"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.26.0"; sha256="0qy4pm23vyy23zwsjkf0mpf2c0p54nq26w9lq7j0ld4bx9l3jc6c"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.32.0"; sha256="1gg6p59hj602vqhhn9hasm100lqx9ra9wlb9iykczhhgnmrvk707"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.30.0"; sha256="0v4467q9w7qzqv8rpdw78098aivkl0pfsj485wcasfk8932c3nmm"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.32.0"; sha256="1fqc6rxwmkl8pqjmqg799rvyayc14xf1pp2g5h33zlx4lblv53hd"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.32.0"; sha256="0fsr1y1vlb0nk0jh8j0xngmn1x7q099cx2kc3lyh1vcy62xzhkjv"; depends=[CellNOptR genalg]; }; - CNTools = derive2 { name="CNTools"; version="1.46.0"; sha256="021pwiqzyp4grbfshsvc7kgv1f9276n7dn593br698xjdh4wz004"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.22.0"; sha256="0kdpcdhzl9951g36s7m30yqcar7h5w16j3x0l1qrm9py08b1kgcd"; depends=[BiocGenerics exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; - CNVRanger = derive2 { name="CNVRanger"; version="1.6.1"; sha256="1sy14h1dq9yr4xvxji2g3x4x2z85wn68hmlil425z24fxjywynj0"; depends=[BiocGenerics BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; }; - CNVfilteR = derive2 { name="CNVfilteR"; version="1.4.2"; sha256="1bp0yi6jblkviw7mjhgfj0i6szhg8cw0k1q5y622lpkd7in4cdhn"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; }; - CNVrd2 = derive2 { name="CNVrd2"; version="1.28.0"; sha256="0l3ggab6ja699x3kfj66pn7v7sl0bh3jz4ijha6g7v8n22f1787v"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; - COCOA = derive2 { name="COCOA"; version="2.4.0"; sha256="1nxs4dfr533z7qs8g1vzzw85c2w9xbx8hzhs26x9m29139px3pkr"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; }; - CODEX = derive2 { name="CODEX"; version="1.22.0"; sha256="1mrj697x2f94dla9ykxgrqhv7w6jq3z5mvycrfkwq73n1i6v913s"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; - COHCAP = derive2 { name="COHCAP"; version="1.36.0"; sha256="17b7digmhkx02crc10xyxj65772nl3a2c6lnwwc587mj1f7sa6gi"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.28.0"; sha256="1l1qcl7vnjc8846f24mpvmgxra8n9sd6d65231q7s446p353lbs0"; depends=[abind BiocStyle clue coda data_table dplyr foreach knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; - CONFESS = derive2 { name="CONFESS"; version="1.18.0"; sha256="0ymraymc6pjp02lf5j1lqqbnvd3ga4x5m1p6xxgqr61akgcwrfkf"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; - CORREP = derive2 { name="CORREP"; version="1.56.0"; sha256="1zy9qgq1g4q93b8nfilq1yghjvppi4plm0rrqs18qvszbk94ksq7"; depends=[e1071]; }; - COSNet = derive2 { name="COSNet"; version="1.24.0"; sha256="0bb6bahgcgmfi3f3qlip627yq3ffym6zwp9xnaq8i8mvzp9lws78"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.30.1"; sha256="0zk9ayfmaknrysz4ka9wgqhnzrlyahzjsrs28i4fnywbjl6nsg2q"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges reticulate rhdf5 S4Vectors seqinr]; }; - CRImage = derive2 { name="CRImage"; version="1.38.0"; sha256="18scvrqmdam3amm94rhx4ggqlgazjll7ydm8722fx6a8vd6hcma0"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; - CSAR = derive2 { name="CSAR"; version="1.42.0"; sha256="1wprm304ca6ydlsf51bvmf5lnqphyvsg606yzwcvgzrfkry7kmfv"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - CSSP = derive2 { name="CSSP"; version="1.28.0"; sha256="1ma473a3kzck7ycigaybdgyv2j6n4sw5imw3z3mwym2y9dn187p8"; depends=[]; }; - CSSQ = derive2 { name="CSSQ"; version="1.2.0"; sha256="1mp4s26cy952facrc8gwj42ngn96ad886aly2rp4bf1n5sxp4maj"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - CancerInSilico = derive2 { name="CancerInSilico"; version="2.10.0"; sha256="1mpd6cnb1qfnknf0zkn7qsimr819pki96sqk5iv810fi2jy8wz1w"; depends=[BH Rcpp]; }; - CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.32.0"; sha256="1n3viksbg69hcr4a9xyhm3x61m4c0y0gh67jw9mabkbrwnfcvi2s"; depends=[AnnotationDbi limma qvalue]; }; - CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.16.0"; sha256="1z1nyva7k4vcd612ck7j5xbjrcwd3prcm6jg1kfiypdz2bbl3wyl"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust survival]; }; - Cardinal = derive2 { name="Cardinal"; version="2.8.0"; sha256="02j7v7x08nac40jhmnnav7rkgsd6g1yvb0pj6r6qml9ry4dd5320"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; }; - Category = derive2 { name="Category"; version="2.56.0"; sha256="0m77wpnica0h2ia9ajdaiga4plgz1s9wls6pdnxzk7kwl8a68wkr"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; - CausalR = derive2 { name="CausalR"; version="1.22.0"; sha256="08ldzx611j01r6k2hs4319yjlcpd2g92z0wf43pnhavbiv18b2d6"; depends=[igraph]; }; - CeTF = derive2 { name="CeTF"; version="1.2.4"; sha256="00jnig0myi6nxlhsx8sxaf3sx4q4jaaw40kws3i2gj0jgxmsz6zr"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 GenomicTools GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment WebGestaltR]; }; - CellBench = derive2 { name="CellBench"; version="1.6.0"; sha256="1y396c8s2a465m77hxz6avcrh15czd0pvx2gsxjqk4q7jf1avy04"; depends=[BiocFileCache BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; }; - CellMapper = derive2 { name="CellMapper"; version="1.16.0"; sha256="13791r6bbrxqnmnvbz9f1m4jplrj2f2h2i3lmq6gypyxwhvf3yd5"; depends=[S4Vectors]; }; - CellMixS = derive2 { name="CellMixS"; version="1.6.1"; sha256="1ba6162n0gpkvyk2kf75cymysqsfcxn4pb0g4incxxmfm4x2hnnf"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.36.0"; sha256="1nz3qc6v9pij3f0f3ckn82hdpz5j94gsgdch5xkwdn7zn95wjzl7"; depends=[ggplot2 graph hash igraph RBGL RCurl Rgraphviz stringi stringr XML]; }; - CellScore = derive2 { name="CellScore"; version="1.10.0"; sha256="1hydll39d194n3xvy6196sdh1qy0xl2rydvgdaclcmppx002w39s"; depends=[Biobase gplots lsa RColorBrewer squash]; }; - CellTrails = derive2 { name="CellTrails"; version="1.8.0"; sha256="01af2c32pln2warph2rqxhjdc8yn1hnak046941wdp7rj6fcpima"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; - CellaRepertorium = derive2 { name="CellaRepertorium"; version="1.0.0"; sha256="0xwzibxr80vxn1b9s9lra11vnqfs3anr75h18kk3bqw40n62ifdy"; depends=[BiocGenerics Biostrings dplyr forcats Matrix progress purrr Rcpp reshape2 rlang S4Vectors stringr tibble tidyr]; }; - CexoR = derive2 { name="CexoR"; version="1.28.0"; sha256="1al9vaxlfb9w6q53rqxdhz18rv1xkhmky92wqjl6mlz99bcwcdb8"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChAMP = derive2 { name="ChAMP"; version="2.20.1"; sha256="1nfqw2ndq4yn6l56iyhdpfjcwxb83mxknn3m008mq5ag9j2dshg0"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; - ChIC = derive2 { name="ChIC"; version="1.10.0"; sha256="0amiz5p87r542hr4wvh41s0dij2j4g20y3csa19dci74nciyjcam"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; - ChIPComp = derive2 { name="ChIPComp"; version="1.20.0"; sha256="0dbypfgys74snmyf982183ilzg6vamfw1d5y0lp5p8zxbffh2xl7"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.26.0"; sha256="1im1p5347ivxj5gjakxcnk0ysc9vbn62s042dy8lcc4p3wnkipbk"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; - ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.9.0"; sha256="1d1g203w5i88n1xbpz3svqk7fdns4pvbck9hfy5nwxkqy85s6xgl"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; - ChIPXpress = derive2 { name="ChIPXpress"; version="1.34.0"; sha256="04gnvxx5zqaspc0ignbx840y74bm6hxifqs8aq1gqavmx6v949s8"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; - ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.12.0"; sha256="1l10nms6qkxwqp95ii6shhj2q380f03nyvf5s79v6zvnc28lkwyj"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; - ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.14.0"; sha256="15r5jgkfwwfqpw4v4q2ddmglm3bfw002nnbnzn1s0v2b1w3bgiag"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.24.2"; sha256="0l417aygs89wf1j9fjpfjhahzskbpbgcrm8xpx3qm4s0307vfzkw"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI dplyr ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 graph IRanges KEGGREST matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors SummarizedExperiment VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.26.2"; sha256="1r197qwsriap6s6nb2p9j3521pjs2f0lgyzvppvlxj1531sa6g6z"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.44.0"; sha256="1w44cr8rylha26jjvzg05q4rv68ji40ajbvsihvw4b8zp3zm5lxj"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.44.0"; sha256="0vs1kjip9zz8ab01l37j7mny0d1wv40vzr1vwcxcmj095g3j7ycn"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.28.4"; sha256="0np0kzy4d3w79k2nr4hv17zx9nyld50w6dz0im9ciisb6ya4ba8x"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="3.42.2"; sha256="10d8h6w24h4s7l02zzv6q46w3yiqsjizip7mf11cvkmd6p7qxfl9"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; - Chicago = derive2 { name="Chicago"; version="1.18.0"; sha256="1w94sm0wbh6rzjfi84v8y959mwfik71q7pmijbkappz5bm1hk72i"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; - ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.44.0"; sha256="1n64di6vggw1whz9f6fjm549zm9ijpd59cqn0gdmdsf5h3x1cmv0"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; - ChromSCape = derive2 { name="ChromSCape"; version="1.0.0"; sha256="0fr0jbswgmxpl3asj4vj8w3990i4cylwb483i5clbhmbqh767w89"; depends=[batchelor BiocParallel colorRamps colourpicker ConsensusClusterPlus dplyr DT edgeR fs GenomicRanges ggplot2 IRanges irlba jsonlite kableExtra Matrix msigdbr plotly qualV rlist Rsamtools rtracklayer Rtsne S4Vectors scater scran shiny shinycssloaders shinydashboard shinyFiles shinyhelper shinyjs SingleCellExperiment stringdist SummarizedExperiment tibble tidyr umap viridis]; }; - CiteFuse = derive2 { name="CiteFuse"; version="1.2.1"; sha256="14dq451d9nmmpbfdn7zhsnraj5289892nl1gs71wp6ggp4a38wsm"; depends=[cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap propr randomForest reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SummarizedExperiment uwot]; }; - ClassifyR = derive2 { name="ClassifyR"; version="2.10.0"; sha256="05whil0lizxcihpf9n8sdk5ck3as3kny117f4jnbxyh4yjh1qxpb"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; - Clomial = derive2 { name="Clomial"; version="1.26.0"; sha256="1ncapsifjhs45jrmly6k4lspp4lam3pm80iw5hwc742c28zzlvvk"; depends=[matrixStats permute]; }; - Clonality = derive2 { name="Clonality"; version="1.38.0"; sha256="0fn9ddfbfjkkczjwa301cfsy1fl42960dbwsi5pjkixdyfs2sqcz"; depends=[DNAcopy]; }; - CluMSID = derive2 { name="CluMSID"; version="1.6.0"; sha256="0rmc7mv9xikydbflnzzzdpsklpdr1j1q4amnkbb8yll7zf1z9y4s"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; }; - ClusterJudge = derive2 { name="ClusterJudge"; version="1.12.1"; sha256="1qpym07wc0sqc9v8s32hb7z248liscwz4njkhl3kq4j79xy48lji"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; - ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.18.0"; sha256="1kw1lm2rsqcq4vifv7bd6v1xqkd97ynq4w047m590y08xz1w1fym"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; - CoCiteStats = derive2 { name="CoCiteStats"; version="1.62.0"; sha256="04qrf00aid3zirbi0g0b7ny7yw465i0vppk1kmmz7yh44yi54jic"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="3.10.0"; sha256="0431aiqaibj223xn9qa67shhj5hp30fnyiwrqc99bvjxx99kh6f3"; depends=[BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - CoRegFlux = derive2 { name="CoRegFlux"; version="1.6.0"; sha256="042kpcq9v5szimrg00wyrsrjdql1r0dr6ia2zln24gs2rx15jdaa"; depends=[CoRegNet sybil]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.28.0"; sha256="1hfj29id91sik0b160mlzakaf75070lv8rgd5y37l0kp1fpxysyi"; depends=[arules igraph shiny]; }; - CompGO = derive2 { name="CompGO"; version="1.26.0"; sha256="0m2vgg7mm4s2i14xslvm93s0b7x1f0ywwfxql0ni73czjik5pprw"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.6.2"; sha256="1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"; depends=[Cairo circlize clue colorspace digest GetoptLong GlobalOptions IRanges matrixStats png RColorBrewer S4Vectors]; }; - ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.54.0"; sha256="06h85l1mg2kpjprylzz44nhxp64k211plhch5qhg39wp0fk34lfp"; depends=[ALL Biobase cluster]; }; - CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.6.0"; sha256="09f5gbw7lch6sbf4hidgijkr2dvz2cx6knyncph77jhvgfhgkp8y"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.22.0"; sha256="060p6l6l8i6b15hyyz5v5kkxih3h4wcciixii51m9mn82z23xr2f"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; - CoreGx = derive2 { name="CoreGx"; version="1.2.0"; sha256="1iq1m577w81wi4xl8i1liyh8vnwjq57bxc0ph8n0ayz1h2rcf56p"; depends=[Biobase BiocGenerics BiocParallel crayon data_table lsa piano S4Vectors SummarizedExperiment]; }; - Cormotif = derive2 { name="Cormotif"; version="1.36.0"; sha256="1fixghsp8f6j33259kdchnjal86jqjnvc3dhcbzppyrqbji81x2l"; depends=[affy limma]; }; - CountClust = derive2 { name="CountClust"; version="1.18.0"; sha256="0ih52vnkkdx56j8iqfyhikpi6pwg5dg21m54zksb2bvpc9j2sy5z"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; - CoverageView = derive2 { name="CoverageView"; version="1.28.0"; sha256="1k89gzqhd8ca8s9gk5bfzringnc5nayqbwzwwy35fls1cg96qmsj"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - CrispRVariants = derive2 { name="CrispRVariants"; version="1.18.0"; sha256="0carjksv5a73hwic1pzxbwl5rgax0n0makhbbma4viqz58d810aw"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; - CytoDx = derive2 { name="CytoDx"; version="1.10.0"; sha256="161b3q1gcbj8b0rmawic43yw8nk94mvzx1q88gxkjjmb2pp4z9hr"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; - CytoML = derive2 { name="CytoML"; version="2.2.2"; sha256="0ckjb7bkz0cy46scrv4vl9w37g54c0yihvzmbkzilip1ikpvhxd1"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice openCyto plyr RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib RUnit tibble XML xml2 yaml]; }; - CytoTree = derive2 { name="CytoTree"; version="1.0.3"; sha256="0mzcqgmzl8q7zz92648n9m7wwqxgx6jp4ry68fw899qf465hrkw7"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; - DAMEfinder = derive2 { name="DAMEfinder"; version="1.2.0"; sha256="1v150s4b95gpszzms87jx4s5spn681aai3i6s057bsp89a8915a3"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; }; - DAPAR = derive2 { name="DAPAR"; version="1.22.9"; sha256="13wfp8985n9d68xiw7jknppmfyy6lz77wlky7d3v56h3dn3h94jp"; depends=[AnnotationDbi apcluster Biobase Cairo cluster clusterProfiler cp4p DAPARdata dendextend diptest doParallel dplyr factoextra FactoMineR forcats foreach ggplot2 gplots graph highcharter igraph imp4p impute knitr lattice limma lme4 Matrix Mfuzz MSnbase multcomp norm openxlsx pcaMethods png preprocessCore purrr RColorBrewer readxl reshape2 scales siggenes stringr tibble tidyr tidyverse tmvtnorm vioplot visNetwork vsn]; }; - DART = derive2 { name="DART"; version="1.38.0"; sha256="0icil7c78s9rs1xnfijx8mgig03p9mwgh5izvv2m631qcxfh5dw2"; depends=[igraph]; }; - DBChIP = derive2 { name="DBChIP"; version="1.34.0"; sha256="17aslxs3yk5ajgji2pl5w8ynczb1qyab81wsqvgnwy40sggm59mw"; depends=[edgeR]; }; - DECIPHER = derive2 { name="DECIPHER"; version="2.18.1"; sha256="0jz2lffks9rrk5wzbvnr8yal91kf8rg2xn0fmg9ywk45ql657sm9"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.10.0"; sha256="1zqscgql9l3bsz0aiiymy3mv2awsmkncigigcd69w2i6frcyw8k1"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; - DEFormats = derive2 { name="DEFormats"; version="1.18.0"; sha256="0n192xj3jxr4yfrwi7fhcr1dla33nmysc01rap3k7pq37xnd2sb9"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; - DEGraph = derive2 { name="DEGraph"; version="1.42.0"; sha256="10kk7z4iqyh25ihfqddhmiqz91bnfs3xnc5166i00mkdx4sqh961"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.26.0"; sha256="1qqwmxzkf67x7rvili5a3nhvfp53vrrhk6zskdw89kq6kxp5s58p"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; - DEGseq = derive2 { name="DEGseq"; version="1.44.0"; sha256="1wj2wz37bqhi5j0azds7daidmamdakybjvnlga27s123aiw7lghn"; depends=[qvalue]; }; - DEP = derive2 { name="DEP"; version="1.12.0"; sha256="1ag33l1mafyiw2gzybc0cgdq1njl4y3anxav1kxlmbbfk9j1gc89"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; - DEScan2 = derive2 { name="DEScan2"; version="1.10.0"; sha256="04n8z3ld0css74py3xw90wdq46vqbwnpxwhn1kh2yaq05fkrbivd"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.30.1"; sha256="1i0jpzsm1vl7q6qdmplj45w13lsaycxrx5pazlanjba2khn79k19"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEWSeq = derive2 { name="DEWSeq"; version="1.4.4"; sha256="12q4nmm33sxn6g0bmilvy5v0b3k9q19bz6w33dfb1n5dvq9i645f"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.36.0"; sha256="0wfjb42xcr4wjy8a654b74411dky8hp6sp8xdwf0sxqgsxy106qi"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; - DEqMS = derive2 { name="DEqMS"; version="1.8.0"; sha256="1la1gpwlwkxpbn0l87vfk36x80m34gc5lpdbcfcz10z0xw8a1fwc"; depends=[ggplot2 limma]; }; - DEsingle = derive2 { name="DEsingle"; version="1.10.0"; sha256="0s078z98iigk18k1bymm2fkq48ixd9730hxppgf71lam7fhinykj"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; - DEsubs = derive2 { name="DEsubs"; version="1.16.0"; sha256="0n40xcga20z37jg8q4g569lb9q7p73x4j6qdncl15zh845sq16zb"; depends=[circlize DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; - DFP = derive2 { name="DFP"; version="1.48.0"; sha256="076cbdm6zm6784spk634f1a0z05g5xlm32n8v1czmbw1sm13xyhh"; depends=[Biobase]; }; - DIAlignR = derive2 { name="DIAlignR"; version="1.2.0"; sha256="1xdql55ssnyxmgk6im2mn5f7dadbhbvmdwqpairrp7b9l585x0jr"; depends=[DBI dplyr ggplot2 gridExtra mzR Rcpp rlang RSQLite scales signal tidyr zoo]; }; - DMCFB = derive2 { name="DMCFB"; version="1.4.0"; sha256="05bcfwvg1b61fr0x62b9ppnp1aj3h8cdjcy2xxh0y9599xsmcjhz"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; }; - DMCHMM = derive2 { name="DMCHMM"; version="1.12.0"; sha256="1mnnx0cwxr1bbqjmkkkccv7p52dn77nvwjx6dn3x9gpb63hkyyzd"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; - DMRScan = derive2 { name="DMRScan"; version="1.12.0"; sha256="1iim6vf9d25zy9h7634ypr0q8ph8r0x6ia9f5mqxx6kkx3dqlb2d"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.22.0"; sha256="1k4x2gjlgzsxnyxg08gr5qqh4ks20fwgfhmwzadnd8fj8hylghf0"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="2.4.1"; sha256="09vm8rzl6gjp8x3i84570kp9q6i9wjzz8ihlbg3wmwzm8pf1djqn"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; }; - DMRforPairs = derive2 { name="DMRforPairs"; version="1.26.0"; sha256="15bmn9dwaplp8sam5976wc3fsgb5459fdb9b96675gnw212v4gqq"; depends=[GenomicRanges Gviz R2HTML]; }; - DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.6.0"; sha256="0dfcz47shzgcvq8zkqq4kx4j6acllv7l6mmkny2l0z4130wngxzi"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; }; - DNABarcodes = derive2 { name="DNABarcodes"; version="1.20.0"; sha256="0zzf6xgg6k1gdig8zvpawck2bgmamsc0k43j4pl4xsz9an6dmzbg"; depends=[BH Matrix Rcpp]; }; - DNAcopy = derive2 { name="DNAcopy"; version="1.64.0"; sha256="0km5af4iw8a0m6by933lgdi5246jafyfxk6fsqdiwg07v9wxw5hc"; depends=[]; }; - DNAshapeR = derive2 { name="DNAshapeR"; version="1.18.0"; sha256="11yi7rr8a8ddps2p1b05idmq265gpbp5y1a074mrm0i03sv94syf"; depends=[Biostrings fields GenomicRanges Rcpp]; }; - DOSE = derive2 { name="DOSE"; version="3.16.0"; sha256="149hpf690jls5r5g84sh2hqs10qbqi94syhxfv8n2f800fk7lgy4"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2]; }; - DRIMSeq = derive2 { name="DRIMSeq"; version="1.18.0"; sha256="09rvb47k5vbksimkyymbc7m90k9sp9awvgzk316x1lbwxq9ihsk7"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; - DSS = derive2 { name="DSS"; version="2.38.0"; sha256="084qcrr4sx9p21wr5pbqqvyqsnswzfnkxaipi1hyzrqnfmypp0cg"; depends=[Biobase BiocParallel bsseq DelayedArray]; }; - DTA = derive2 { name="DTA"; version="2.36.0"; sha256="1z4dv1lz8c1j9m428cqn6f2ilazn3i0x2viv867f8hyam5gwfvbp"; depends=[LSD scatterplot3d]; }; - DaMiRseq = derive2 { name="DaMiRseq"; version="2.2.0"; sha256="1v36vphd9pxjhfxsbwmvjclh7ql4nfwfma0i94sx4kwj5k8s4iky"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; - DeMAND = derive2 { name="DeMAND"; version="1.20.0"; sha256="1h0k97s4kjzc7j75z4qczkkss9a8y0i2vfgw9330mv4x2zxzrpj3"; depends=[KernSmooth]; }; - DeMixT = derive2 { name="DeMixT"; version="1.6.0"; sha256="17yd879jal5z7j99qafq7vc9jqqcxsb08agyx11wcn029wf5h8xk"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp SummarizedExperiment truncdist]; }; - DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.32.0"; sha256="06nqn490adbas07p1n38azadav57mz6ydc6ngwc6ayibiyx4j9ay"; depends=[ggplot2 limSolve pcaMethods]; }; - DeepBlueR = derive2 { name="DeepBlueR"; version="1.16.0"; sha256="0rxhbkr15frg176g8kwb24rszlhhrg5hiknbrbgbryfycvgps5zr"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; - DegNorm = derive2 { name="DegNorm"; version="1.0.0"; sha256="0yg7b0ij8ninn1ykv595wl5i3f81jpxisvj5pmp5x1ngni2y1p2h"; depends=[data_table doParallel foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges plotly plyr Rcpp RcppArmadillo Rsamtools S4Vectors viridis]; }; - DelayedArray = derive2 { name="DelayedArray"; version="0.16.3"; sha256="0w1wppy6m2iv41852dscg3y19sq84ahdx3m7c2p2pxjcznmv6hys"; depends=[BiocGenerics IRanges Matrix MatrixGenerics S4Vectors]; }; - DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.6.0"; sha256="1kd40x81q1bb7g1cn255b80481gb2r22dfc8qcdh8rk2xdg05351"; depends=[BiocGenerics DelayedArray S4Vectors]; }; - DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.12.3"; sha256="1hb8jv5dy3svf7xan6rym7amwdqm5mvl9qx5xhmj1vkb81bizn7h"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix MatrixGenerics matrixStats S4Vectors sparseMatrixStats]; }; - DepecheR = derive2 { name="DepecheR"; version="1.6.0"; sha256="0c7yv3a7k22nhhw3601n8jdl61cjmlny9b3nfrzsp78mkxi0h469"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gmodels gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; }; - DiffBind = derive2 { name="DiffBind"; version="3.0.15"; sha256="06f613s8d9z51njyf839g22gwybx9zs5n6xghwr5j1ad2n4m6qwi"; depends=[amap apeglm ashr BiocParallel DESeq2 dplyr GenomicAlignments GenomicRanges ggplot2 ggrepel gplots GreyListChIP IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; }; - DiffLogo = derive2 { name="DiffLogo"; version="2.14.0"; sha256="16af7sfgclmyzxj60j35snmd407l25a0h6nhmsjg4p9giz5ccic1"; depends=[cba]; }; - Director = derive2 { name="Director"; version="1.16.0"; sha256="0v3nf8dvk9zipx2pwzkrj5ldd7dd2ys1350mc6n0cqq8vmjcyfw1"; depends=[htmltools]; }; - DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.32.0"; sha256="098zql6ryd1b0gkq4cjybblyh0x8xidxxfygqq5a5x9asl8y4vsk"; depends=[BiocGenerics IRanges S4Vectors]; }; - DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.6.0"; sha256="1l0nz1xwbx3dvnwr60zycas8x08mplkik9r4d266djb4as3h5xr6"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; }; - DominoEffect = derive2 { name="DominoEffect"; version="1.10.1"; sha256="1lckd9s9s5vwjwl4n1lfsd0jqzd2cjgknxgadz6kgd7ynwbsdlmz"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; - Doscheda = derive2 { name="Doscheda"; version="1.12.0"; sha256="1djkx3j7z6jx9zgscrav1x6zcch37yqxakkzg1nx8kfvk9fcx989"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; - DriverNet = derive2 { name="DriverNet"; version="1.30.0"; sha256="10saq3lp7idbf1nq7plxxqz9bp6v75gq82hl27q6ax3y998dbmln"; depends=[]; }; - DropletUtils = derive2 { name="DropletUtils"; version="1.10.3"; sha256="0k7rqv9mh817rqjs74jw0gl2v0izbnwvccynhzch4q9vhnp36bbq"; depends=[beachmat BH BiocGenerics BiocParallel DelayedArray dqrng edgeR HDF5Array Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; }; - DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.32.0"; sha256="1cvfgxaay7w9bp3vwi42xyz0a6v39fv8b5mgb1ar4yf61cxrxk0j"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - Dune = derive2 { name="Dune"; version="1.2.0"; sha256="13fbxm6fwr2mhqjrj7w574qfpsrs93v62a4g0g24j9vf6pvmi4md"; depends=[BiocParallel dplyr gganimate ggplot2 magrittr mclust purrr RColorBrewer SummarizedExperiment tidyr]; }; - DynDoc = derive2 { name="DynDoc"; version="1.68.0"; sha256="0s4c66biiyzn28n50dlvf4dk1kyqxbdnp4k6mfb8gcmzbvi9pc1w"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.32.0"; sha256="0qi8bbix5bjahs73ljhfvidlbj8hz5m5j0sb9cjxlngnnldbh4ww"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; - EBSEA = derive2 { name="EBSEA"; version="1.18.0"; sha256="0f0j7p96sph909ffh5pa84vsg90wcvzlfnppkhx8kgnrw43jmwsg"; depends=[DESeq2 EmpiricalBrownsMethod]; }; - EBSeq = derive2 { name="EBSeq"; version="1.30.0"; sha256="1x2489xaqg85v7n3yhqs0nh9ha6dn4m167dkc6akzig4xivwjjny"; depends=[blockmodeling gplots testthat]; }; - EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.24.0"; sha256="0192j5bjqskac96c0lf8y6kj8vzgl7xdfa1cxgf5pyaxd65pq805"; depends=[EBSeq]; }; - EBarrays = derive2 { name="EBarrays"; version="2.54.0"; sha256="1r2dl19my1hqkq01fqk48pk3agb98vgrplj56kb4srhz2xm0w9pd"; depends=[Biobase cluster lattice]; }; - EBcoexpress = derive2 { name="EBcoexpress"; version="1.34.0"; sha256="0r394l68h30r9rzijgvyjgwlv92ih89bivlr6rvp99hfaf53rn3w"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.24.0"; sha256="0fznj7lsgkss1svv4rq8g87s1gmnbd7hccim41dv1c2w2nl0n2ip"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.28.0"; sha256="1mnra2r790jb29x7bc1y0p9l9kxwnq683mah8mjs5yxnd4pxc301"; depends=[baySeq edgeR Rcpp ROCR snow]; }; - EGAD = derive2 { name="EGAD"; version="1.18.0"; sha256="0bg74jydh3jpdr41fah6ir2lsb24wcicf42lvfkp0fj5i11j52p2"; depends=[arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS plyr RColorBrewer RCurl zoo]; }; - EGSEA = derive2 { name="EGSEA"; version="1.18.1"; sha256="1fslw9wgkr6fgy7p0awizlvx6vc2qxq47w5fksz5q6d79gd8hc08"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; - ELBOW = derive2 { name="ELBOW"; version="1.26.0"; sha256="02g3cqvg529iks5kn7zzxv1fa7hxiibhfb69djkyxnlvhrg0ylhj"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="2.14.0"; sha256="1s6k2qiy65c0jvmnjnw6gibjf892lb930pihmx93cgw3ly593v90"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; - EMDomics = derive2 { name="EMDomics"; version="2.20.0"; sha256="08n46wbca76bs1wi26c8j5a0mk3q7blljfpxn7ka2balcxry56vi"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; - ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.16.0"; sha256="1chyq51393dlc42k8bjap62lgjw8c75h2y5xl8v5k9x0np40ahc7"; depends=[AnnotationHub data_table dplyr ENCODExplorerData GenomeInfoDb GenomicRanges jsonlite RCurl rtracklayer S4Vectors stringi stringr tidyr]; }; - ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.38.0"; sha256="04wrxsplqc1rif0xzfgdg46lk730mc0z055wiw3inxcqp00b2s9h"; depends=[rJava XML]; }; - ENmix = derive2 { name="ENmix"; version="1.26.10"; sha256="0372ss40rcdvj5qs8mfwxpc3fl905ywx99hg6s0870r1minz6vh5"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots gtools illuminaio impute IRanges irr matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; }; - ERSSA = derive2 { name="ERSSA"; version="1.8.0"; sha256="1f5wwl91byzh7v1z49l1a0lyfyc34lpzzy38q9f0rmc2xp93kb99"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; - EasyqpcR = derive2 { name="EasyqpcR"; version="1.31.0"; sha256="0lb2px789668fr1gxghycy7lbdkpwmippv6xmmwws6rbanvfd6v4"; depends=[matrixStats plotrix plyr]; }; - EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.18.0"; sha256="0cxdjdn94vn1zhdpf17nxr7q4avq293026pwi0w7q139gll8x8x2"; depends=[]; }; - EnMCB = derive2 { name="EnMCB"; version="1.2.2"; sha256="0h00hwi607lzfkyi4jvxgg2dz9q4ly6s92xvi2a6jlnwdqn0gjq3"; depends=[doParallel foreach ggplot2 glmnet IlluminaHumanMethylation450kanno_ilmn12_hg19 minfi rms survival survivalROC survivalsvm]; }; - EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.8.0"; sha256="17an3378h8cajh9y8nghh56s653ry80xbdqbm7bnkgv70ak60kgy"; depends=[ggalt ggplot2 ggrastr ggrepel]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.20.0"; sha256="0r95hvwhwhq3777fl54514bjhkwy9chxagwbh5jgr3visa17n3mj"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.20.7"; sha256="0f1qivmkjihhhzkikacap3azq820mirp80pcrmygpjchx1g4yc87"; depends=[AnnotationDbi BiocFileCache BiocManager edgeR GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview Rgraphviz S4Vectors safe SPIA SummarizedExperiment]; }; - EpiDISH = derive2 { name="EpiDISH"; version="2.6.1"; sha256="0r0jszbi20556sdqkb8zhsrdigcsp09kq4ldxp9xlixm8xhm6smv"; depends=[e1071 locfdr MASS Matrix matrixStats quadprog stringr]; }; - EpiTxDb = derive2 { name="EpiTxDb"; version="1.2.1"; sha256="0x8lbxw9jwxym97xn5x9zxzqhxqbgn2zfv3ky7vdjfv4vy4wb1v9"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings RSQLite S4Vectors tRNAdbImport xml2]; }; - EventPointer = derive2 { name="EventPointer"; version="2.8.0"; sha256="05z4nj85cx01ic654lywgns60px06jwxk612822yl2ihpw2a14rs"; depends=[affxparser Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg38 cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; - ExCluster = derive2 { name="ExCluster"; version="1.8.0"; sha256="0albmhq2pmlrpip51jxhbs96rgrikcbd6hdzsxz7cfkf2lv3pl8p"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; - ExiMiR = derive2 { name="ExiMiR"; version="2.32.0"; sha256="04gmd3021za54w1gihzd3k73xbrad5yqxplckrj43rh87g5vpr3f"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExperimentHub = derive2 { name="ExperimentHub"; version="1.16.1"; sha256="1iyf052hh2dhlwzwwrj571cwr3hd9wp2j915sqg77x6jn40wjr1g"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; }; - ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.16.1"; sha256="0h8lh40agsx8d4hj1h1pb4adzzs2k4zlbsxh6ji35w99cgk9dlwh"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; - ExperimentSubset = derive2 { name="ExperimentSubset"; version="1.0.0"; sha256="0kkf8cbb9a8qpx0ddhdkjjy029zr1l40cil4z0zyq0la5hfxi63f"; depends=[Matrix SingleCellExperiment SummarizedExperiment]; }; - ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.2.0"; sha256="1bn0vl658qcxrxxjn8qhrfmzsff7pxcfbz38n22yrf9zl6wdf43l"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard shinyjs tibble tidyr]; }; - ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.18.0"; sha256="0m0w3q6kgyd5dfpgp2h7v2b3z35ivvhij5hjgrcwci5s4328q74x"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; - ExpressionView = derive2 { name="ExpressionView"; version="1.42.0"; sha256="1hkp39hsv3x9s9ayhxjqpaglryxff9k1avl14imrsz1ajrnzpqys"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FCBF = derive2 { name="FCBF"; version="1.8.0"; sha256="0737ps759g38j091pbxap150xkzmv2gq4k32wbs9pgjylzr4p7wi"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; }; - FELLA = derive2 { name="FELLA"; version="1.10.0"; sha256="0z9s7aiyp42lhic2qpwacapy204agb2yjbmmf0yqnfgvgxyyqa49"; depends=[igraph KEGGREST Matrix plyr]; }; - FGNet = derive2 { name="FGNet"; version="3.24.0"; sha256="0icfmk4anhdqwabvyv01hp7vn0684v56iqqr0mc35whd70l7anws"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; - FISHalyseR = derive2 { name="FISHalyseR"; version="1.24.0"; sha256="0jsl2sa3hzs9hbv9jswg5wq1nhap23lidxdimkx9m9y20gsfc3ch"; depends=[abind EBImage]; }; - FRASER = derive2 { name="FRASER"; version="1.2.1"; sha256="083ibz24ziqz8hxpi84zf8qrwfpj4y2b6q7ia2wzx5gxj9z2nmip"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr generics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats OUTRIDER pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.26.0"; sha256="0an707fgsj89b2cjilyv4vpjm0a0w49brmwksm4dzbp2yjdlx7fc"; depends=[fda MASS]; }; - FScanR = derive2 { name="FScanR"; version="1.0.0"; sha256="1s62j948p3sp5ljx883g5h6s7c0m5q2wrmajypk50bbn6l9ymjdp"; depends=[]; }; - FamAgg = derive2 { name="FamAgg"; version="1.18.0"; sha256="1a3z7ipjnz23lfsgiin6brd3dsyvcz01pv0r8pgdvz94q5lih3ns"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; - FastqCleaner = derive2 { name="FastqCleaner"; version="1.8.0"; sha256="1vsc463jn30lp0py178ai35mzk62qscbvvaswwqkxvr641vnh0wp"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; - FilterFFPE = derive2 { name="FilterFFPE"; version="1.0.0"; sha256="0r9gr4sprcr16yk1hw1283cczhpf5aidss9iv26hsfbzjfkrha38"; depends=[doParallel foreach GenomicRanges IRanges Rsamtools S4Vectors]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.20.0"; sha256="1251g9p326mslxm9wrq7h1lixf16bfknfi4mvzzmr34m3afd65f2"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FitHiC = derive2 { name="FitHiC"; version="1.16.0"; sha256="1sdfkqc6s7m9whkzr0mllzzfjzhj2g54ncjwxj8q0azjgszrfwd2"; depends=[data_table fdrtool Rcpp]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.22.0"; sha256="12i8v1p1qp3schkr86j8ic9v88lcn7l9gp56r6p44rn7w0d6a8d8"; depends=[jsonlite RCurl XML]; }; - FlowSOM = derive2 { name="FlowSOM"; version="1.22.0"; sha256="0gydp6q6zqkadw356k9br646zfynz8gk9ckbx9d297x503j5sgwf"; depends=[BiocGenerics ConsensusClusterPlus CytoML flowCore flowWorkspace igraph RColorBrewer tsne XML]; }; - FoldGO = derive2 { name="FoldGO"; version="1.8.0"; sha256="0xzmmr5amgpblfyk00q35knp8yg624rr0splxal9n7dlw7908fjc"; depends=[ggplot2 tidyr topGO]; }; - FourCSeq = derive2 { name="FourCSeq"; version="1.24.0"; sha256="1rwdphcj26xis47n8j1fiyc3k3qbsgn0bhf5bhgy5vm11yqyvicb"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; - FunChIP = derive2 { name="FunChIP"; version="1.16.0"; sha256="173zs1gmsg059xd4115v7xddn99raz632xxhcawz168skv8kacdw"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.34.0"; sha256="1mjxqib9mjnabgr1b5bxm3bjhzb0jrv7cgizdldsijz69abzdzm9"; depends=[Biobase BiocGenerics ChIPpeakAnno GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - GA4GHclient = derive2 { name="GA4GHclient"; version="1.14.0"; sha256="0bv39vqp6pw90hx2iwwkxz8ap5qsndyzm0c7ik30yqkmmlx16p7z"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; - GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.12.0"; sha256="1gx8ay0bj1mgci14k2vgvycq9x3220kfb5gvi0m1g4h0xj7dyas1"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; - GAPGOM = derive2 { name="GAPGOM"; version="1.6.0"; sha256="0hr027h6bav25x2iimlk02xyysm9yw0lj3989rrhsg5y16ja83cn"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; }; - GARS = derive2 { name="GARS"; version="1.10.0"; sha256="1xfms19a8xbwpyjnfnm3kjqah00rlyd8r3rd5phsa837plg76pa4"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; - GAprediction = derive2 { name="GAprediction"; version="1.16.0"; sha256="19y2xyzzh2y0jy1j3d9y3ddc9j98g80znvr7f01wxykz6p67x9lw"; depends=[glmnet Matrix]; }; - GCSConnection = derive2 { name="GCSConnection"; version="1.2.0"; sha256="02qn63aayzxc3idp6wfvq7v657w9007pgdjdfma7blkx3v3sdnf3"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; }; - GCSFilesystem = derive2 { name="GCSFilesystem"; version="1.0.0"; sha256="00fsmfy3ikpmwb7184gv51l1vmgqari0avcjzzi6fbrwsz64fp1b"; depends=[]; }; - GCSscore = derive2 { name="GCSscore"; version="1.4.0"; sha256="1jm38qdjksgac4ywjwa69k9qxl0lxw3grk4vygd81z9yksh797da"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; }; - GDCRNATools = derive2 { name="GDCRNATools"; version="1.10.1"; sha256="014wid50n7qm9y2vy8yib5lgd5rczca1gi6nm9h991dm4d6g3adr"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; - GDSArray = derive2 { name="GDSArray"; version="1.10.1"; sha256="1i7ac17ls6ij926hj7jiigd1mfk9gp04z53lnjmnikmmrd20g9x2"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; - GEM = derive2 { name="GEM"; version="1.16.0"; sha256="0s3h85xsyld45ma9h8y9r6b8j6kkx3fm0gwac6rspdbw683lydzs"; depends=[ggplot2]; }; - GENESIS = derive2 { name="GENESIS"; version="2.20.1"; sha256="0wz60mn23l4r41r4n3miw7l2qmx92dd4lq817hglp4vs22y8kh57"; depends=[Biobase BiocGenerics data_table foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; - GENIE3 = derive2 { name="GENIE3"; version="1.12.0"; sha256="1z7qkv0cgdx2plhc7xdz6s7vwdjhzcdadi35wg3fl6xpids5njf5"; depends=[reshape2]; }; - GEOmetadb = derive2 { name="GEOmetadb"; version="1.52.0"; sha256="0hi7rfnrzf52bwckkx5rjs19pc3kwa3vg8qmzpd5kk7hc2h9rrwh"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.58.0"; sha256="1jzhgnd404wkz978vbqzwbgixr7yk98c7s9q1fzlyax4f8l0cpi4"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; - GEOsubmission = derive2 { name="GEOsubmission"; version="1.42.0"; sha256="1wp4ikpgy40zyz6ajkhc188q22xhdl6z794zjxmw5zm43dbgzpag"; depends=[affy Biobase]; }; - GEWIST = derive2 { name="GEWIST"; version="1.34.0"; sha256="16my87xnhij4w3qz18lsaarn48h11ca5qqyfn4s3fj9jr6pyfr32"; depends=[car]; }; - GGBase = derive2 { name="GGBase"; version="3.52.0"; sha256="1g3rs0d09knvhm6ni20pfbfmilpmc5xx4l7jys29nw8xhl00d8hv"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGPA = derive2 { name="GGPA"; version="1.2.0"; sha256="0ypjalarv0d7n3xs5n7n66g68dk24s33b8nq150kihxvlpzxr99l"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; }; - GGtools = derive2 { name="GGtools"; version="5.25.3"; sha256="10n2aw2h187f7vxfm18qzxh4ci6qr0k5gd1wc1aqdjqdkfaqxzs0"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; - GIGSEA = derive2 { name="GIGSEA"; version="1.8.0"; sha256="1cvmgfzchs69x6ndsl3l73is076g4a572x75ghpfdga8wvavqsfn"; depends=[locfdr MASS Matrix]; }; - GISPA = derive2 { name="GISPA"; version="1.14.0"; sha256="0l6b6izqlr9bp2nknamz9gn160mvbpvpkcf5npsq8lqpqy15l29r"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; - GLAD = derive2 { name="GLAD"; version="2.54.0"; sha256="06nslbq7bqpib62928vbxmr8yda8370nf5ikfhzpshdg1m1pwwmj"; depends=[aws]; }; - GMRP = derive2 { name="GMRP"; version="1.18.0"; sha256="0gdh4ch2pks72sn7zqrzfr9mb894d4cb6340bmrvyy4qqrzrwf6h"; depends=[diagram GenomicRanges plotrix]; }; - GNET2 = derive2 { name="GNET2"; version="1.6.0"; sha256="1lwi5dkhg1kzf1qqkrjs0bgzz8zg499ia9y5jhzq94xk877wqbbd"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; }; - GOSemSim = derive2 { name="GOSemSim"; version="2.16.1"; sha256="1hk1626172scja2gr6axy98czblz0zljiqgqaknsv2xj6frhxcgs"; depends=[AnnotationDbi GO_db Rcpp]; }; - GOSim = derive2 { name="GOSim"; version="1.28.0"; sha256="0z6i3v4j78ghf6ld3xn5jg1qbizllv426bg4awd9220p5lqb0hal"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.26.0"; sha256="181nvinvpqyl2g56qnylfq6827z0r1rqlg0avygjvfzk8m9njyl7"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; - GOexpress = derive2 { name="GOexpress"; version="1.24.0"; sha256="16kgynn94z9790v6xkpcbr6wzdmfj58qv4yy8vmsii6f6q36l7yl"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; - GOfuncR = derive2 { name="GOfuncR"; version="1.10.0"; sha256="1ah4v2jj508wjsmrncw58wjq2cyris7bnzfw6kr7jp9n4dvn33mq"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; - GOpro = derive2 { name="GOpro"; version="1.16.0"; sha256="1br6rhq6h37kxy8dlf5ky37n6slfmgs8kfj2yzxi2scgw43i3z2r"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; - GOstats = derive2 { name="GOstats"; version="2.56.0"; sha256="18q8p0fv9fl2r6zjxknfjwqxr69dlyxy6c8amzn6c6dwjq1cxk6j"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; - GOsummaries = derive2 { name="GOsummaries"; version="2.26.0"; sha256="01z37g9gdkjbc88ll0dna7cy23jpmzdnbkhncfjdr3f06vcf7c94"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; - GPA = derive2 { name="GPA"; version="1.2.0"; sha256="12z9c6n2l3mm0v0dnx9z9ggy0gpwxr7ycpc6hqq8hz9rnid4rq34"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; }; - GRENITS = derive2 { name="GRENITS"; version="1.42.0"; sha256="1n7q7n1j6g8cc35ls2kdnl05xkfl5a39bkc7q6n4mwky2l6w450c"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GRmetrics = derive2 { name="GRmetrics"; version="1.16.0"; sha256="0grpar3aqnm9dq1imp46zbjkqvi8q6a4l01kpkpl12jz142rjm87"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; - GRridge = derive2 { name="GRridge"; version="1.14.0"; sha256="0z4izc9wzcb2wp9ldx93x8v448c1ryqbqlafzrd8zwbp9d6zqdyj"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; - GSALightning = derive2 { name="GSALightning"; version="1.18.0"; sha256="02gnz4jfs609sccynk29yr5sm6jbjv6m862rqlpkmasw837icd02"; depends=[data_table Matrix]; }; - GSAR = derive2 { name="GSAR"; version="1.24.0"; sha256="002jsxgjjxm83z7lw6x326pn2zcrmpzb50ihvd4n7b6ff5172nyb"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="2.20.0"; sha256="1pgb5hyq7ljxk7z4dazb6r0d1qzygcswgxhiwqqdh0s4imhwqbfz"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.52.1"; sha256="0dawh1kjmf6921jm77j2s2phrq5237pjc4sdh8fkln89gf48zx6i"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.10.1"; sha256="1y98941mk5zbriyn9azg4gg06d6949drb230j5dpys6q76027xwi"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO S4Vectors SummarizedExperiment]; }; - GSEAlm = derive2 { name="GSEAlm"; version="1.50.0"; sha256="1qpj6xgdbb2ajizsh98gsk8lks8c5zrzxgvmr5l5fsschspfvyff"; depends=[Biobase]; }; - GSEAmining = derive2 { name="GSEAmining"; version="1.0.0"; sha256="1lms7q0lazdqwf8n5mldz9kbyqzyyvgkvccnbbyzsk6vn4jn7p3s"; depends=[dendextend dplyr ggplot2 ggwordcloud gridExtra rlang stringr tibble tidytext]; }; - GSRI = derive2 { name="GSRI"; version="2.38.0"; sha256="19j81n1bxc8amnhrg03200y0f8397f15yhzqd8lzhp6k0nyigqfm"; depends=[Biobase fdrtool genefilter GSEABase les]; }; - GSReg = derive2 { name="GSReg"; version="1.24.0"; sha256="0hfjd0s8p6cgs7fq9zaqyiibid1kv9qg66rhyw8qk3yxgvxs70l5"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; - GSVA = derive2 { name="GSVA"; version="1.38.2"; sha256="1b6i6l94mr7xciq4grrjf37zixny2600y6kmvn74n5h23f97npxk"; depends=[Biobase BiocGenerics BiocParallel GSEABase IRanges S4Vectors SummarizedExperiment]; }; - GSgalgoR = derive2 { name="GSgalgoR"; version="1.0.0"; sha256="0d8kbgxfzs9djq49167bckvni3fvdg7ggpfd1gg2i517g96p5yb4"; depends=[cluster doParallel foreach matchingR nsga2R proxy survival]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.20.0"; sha256="1mm231h8pm1fi9x3zqky8x703wkzqp2ml3g004n0xs9jklifqwqz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; - GWAS_BAYES = derive2 { name="GWAS.BAYES"; version="1.0.0"; sha256="15s52awci72czwhd61vrdfzs1jx5mj0ddzwgsrmz3dnyb3n35kqk"; depends=[caret doParallel GA ggplot2 Matrix memoise Rcpp RcppEigen reshape2]; }; - GWASTools = derive2 { name="GWASTools"; version="1.36.0"; sha256="16pw7qazwswm05im9yk7ncbcp8gq3w4hff96v215pfp3z11d7rv6"; depends=[Biobase data_table DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; - GWENA = derive2 { name="GWENA"; version="1.0.1"; sha256="1fyidx91rdlj33k5zz8sk7h0gz2kcmzgqn5vl19y95rr7qphkzds"; depends=[dplyr dynamicTreeCut ggplot2 gprofiler2 igraph magrittr matrixStats NetRep purrr RColorBrewer rlist stringr SummarizedExperiment tibble tidyr WGCNA]; }; - GateFinder = derive2 { name="GateFinder"; version="1.10.0"; sha256="19z58fbj8chxx6n8kvqq9y0a9afd8cmia9xjap52z133naakdjqb"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; - GenVisR = derive2 { name="GenVisR"; version="1.22.1"; sha256="1b675d9x9ngvwabs4p7c0m5gy3y3middqgi5wkx0mfsvf6jn4s6f"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; - GeneAccord = derive2 { name="GeneAccord"; version="1.8.0"; sha256="0rr3rk690m2r68nhf26a2ar28p2zllaq4p9nbq379ih0wv0d27bs"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.32.0"; sha256="1bki62hq54ki6vm83yd72i7sqrr4lis5fd4p9lfcjp7vr008ch23"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.20.0"; sha256="118pl66a70ykl7wp3jvwfs6gjyfb4iim45bczb8ij0b2x4kz16v8"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; - GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.36.0"; sha256="01y45hxfkg08ayx9ca5bwdkc8psx0w6gdgq8k2dlx8j1y9b2z0ci"; depends=[Biobase]; }; - GeneGA = derive2 { name="GeneGA"; version="1.40.0"; sha256="0i89q3sfq2hbh72dzjhc1xdaddg7l440fnsy5ikjsm3nq9bc1jm0"; depends=[hash seqinr]; }; - GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.16.0"; sha256="1xb47cb5dappw04nr6wg0xfbivhhkp9h2nrsx57chva46s7dsyjv"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm Rsamtools snpStats]; }; - GeneMeta = derive2 { name="GeneMeta"; version="1.62.0"; sha256="19ai4mjjyb0fa36y3p2hyxbbdrdamj8ixqyc7vlyyhgrxip4yjga"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.32.0"; sha256="0b7fffhcvg80ryk7ba76n9pscxlc935plbyr4ppi4k06qy9si6k0"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; - GeneOverlap = derive2 { name="GeneOverlap"; version="1.26.0"; sha256="0bvh00n4fx0h1m83bypib3jvln1ihcv77ywrrn9xm20y73gymhkh"; depends=[gplots RColorBrewer]; }; - GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.46.0"; sha256="0513b3y54bwmlp81wqads7sqqiipb8rsj63rxjkllx7viw8877d7"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; - GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.34.0"; sha256="0w3mw1l6p5r0az4g069xs32h0w2xl77mrcbh1c062klrawfr2kl3"; depends=[Biobase limma MASS]; }; - GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.10.0"; sha256="03f10hx8rxm3icfn88d1al48ynvsq5lakf3yfzyy8iq0ia50pnqm"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; - GeneTonic = derive2 { name="GeneTonic"; version="1.2.0"; sha256="1i7bdasp7plja2idhagh01wdkdgg6idvlk1b1mswfrgzkr0mrqyh"; depends=[AnnotationDbi bs4Dash colorspace ComplexHeatmap dendextend DESeq2 dplyr DT dynamicTreeCut expm ggforce ggplot2 ggrepel GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinycssloaders shinyWidgets SummarizedExperiment tidyr viridis visNetwork]; }; - GeneticsPed = derive2 { name="GeneticsPed"; version="1.52.0"; sha256="08by25v4srhql1ikakv1aki5cg284k2rsq4fn9g95xk5amc4bxgh"; depends=[gdata genetics MASS]; }; - GenoGAM = derive2 { name="GenoGAM"; version="2.8.0"; sha256="1kryqm625vljsj392dhsvcvy67y2g4jp39h5iny3hkk6m77jkkr2"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.26.7"; sha256="0fp7sp3jmc2a1hk4r624lfavx8gc2ik3lv43ksc2jmspg6cvh516"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.26.0"; sha256="1q95px6s6snsax4ax955zzpdlrwp5liwf70wqq0lrk9mp6lq0hbr"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.14.0"; sha256="1smwd6y2h7niv9lmfl9cyfqvwd5a5bagasr8zsk9skymyccvkqqk"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang S4Vectors SummarizedExperiment tibble xml2]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.42.3"; sha256="168cf261vmcqffbzassavkjyz9a2af0l6zbv9cagkx6b1qrk3siz"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.26.0"; sha256="0awnf0m1pz7cw9wvh9cfxz9k7xm6wnvjm7xbxf139lrhd4nlyqjz"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges MatrixGenerics Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.24.0"; sha256="0ad0a5cadchx1rkqj4cc8k0y1zf34jgp1406hvik5zabr7xijkbd"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; - GenomicOZone = derive2 { name="GenomicOZone"; version="1.4.1"; sha256="14hqm7aprcmfsqk1fgdmg4cdbj9yv31n1svcs41pv50ydwfpxbkb"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges lsr plyr Rdpack S4Vectors]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.42.0"; sha256="0j4py5g6pdj35xhlaqhxxhg55j9l4mcdk3yck4dgyavv5f2dh24i"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicScores = derive2 { name="GenomicScores"; version="2.2.0"; sha256="1492xirsgag2dsr6ys9wm3a65sq826p9hcdg3b4dm1wbxgdfx6jr"; depends=[AnnotationHub Biobase BiocFileCache BiocGenerics BiocManager Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors XML]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.24.0"; sha256="0jdmzadgpmkrbw69v4iq0amkh5cphg4gw1mvwqw5764a3hr0kwvv"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - GladiaTOX = derive2 { name="GladiaTOX"; version="1.6.1"; sha256="190zikr20xra0jz06hizl0ac38xxcvfm2ps1v7f3lxsgrgr2s7gn"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; }; - Glimma = derive2 { name="Glimma"; version="2.0.0"; sha256="0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"; depends=[DESeq2 edgeR htmlwidgets jsonlite limma S4Vectors SummarizedExperiment]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="4.8.0"; sha256="0hgw1gqy24z8aiwxkyzqy8fpp70z15i9d7wj08296dr79rpi80dh"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; - GmicR = derive2 { name="GmicR"; version="1.4.0"; sha256="11j9gf3pllk3msyx113xdklw0wfkipqxal31isgld57rshzr9qrx"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; }; - GraphAT = derive2 { name="GraphAT"; version="1.62.0"; sha256="00jc9irdxvkz1qr7ijpfj1nw9mxylgjfgwy4v24s448cfqhysbmr"; depends=[graph MCMCpack]; }; - GraphAlignment = derive2 { name="GraphAlignment"; version="1.54.0"; sha256="1l68jwzwjajl0gqj6lbnczi3r5g3wh2sy1prf7vlg00z7lkzailp"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.32.0"; sha256="0ivlspdq0b5ggxjiwx86zp9r966ypg1p2pf7cvgwc072sxdmc4zl"; depends=[igraph iPAC RMallow TSP]; }; - GreyListChIP = derive2 { name="GreyListChIP"; version="1.22.0"; sha256="1d1yvza1aw3vs3di6mrra5l52ig0p9bpzprrqvknjaz5i4yb8ma6"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; - Guitar = derive2 { name="Guitar"; version="2.6.0"; sha256="0lvfrpgrvmrz4f4qmsii70hw10h72zh1g1alv2sf6a6ixhndm0mz"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; }; - Gviz = derive2 { name="Gviz"; version="1.34.1"; sha256="0bmlfz9ri1gkwyl605a2hqi5b8jdpvynrxwghwmrsd657ip6c7n1"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HCABrowser = derive2 { name="HCABrowser"; version="1.6.0"; sha256="0iw7zmq1yn6v4mksv2gamjp73hf41hwqwjgn52fzwgjhvih5qjhk"; depends=[AnVIL BiocFileCache dplyr googleAuthR httr readr rlang]; }; - HCAExplorer = derive2 { name="HCAExplorer"; version="1.4.0"; sha256="03id80rw3qqaclfgy0m14k970ayz034dhd6cfvgp28ydqdm5h06d"; depends=[BiocFileCache curl dplyr HCAMatrixBrowser httr jsonlite LoomExperiment plyr readr rlang S4Vectors tibble tidygraph vctrs xml2]; }; - HCAMatrixBrowser = derive2 { name="HCAMatrixBrowser"; version="1.0.1"; sha256="1fqc39sy2sn4m1cmxxbh1lavwvqrsmgwlfknh1q43c86mdmnqgh1"; depends=[AnVIL BiocFileCache digest dplyr httr jsonlite Matrix progress rlang SingleCellExperiment]; }; - HDF5Array = derive2 { name="HDF5Array"; version="1.18.1"; sha256="14v2adhwi0yac834g23kvfid740raclhmribzd28k10gsjk9cj7g"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 Rhdf5lib S4Vectors]; }; - HDTD = derive2 { name="HDTD"; version="1.24.0"; sha256="14cmhqkwkivzmp68i457x425bhlzrl1cbfldcka567hmgxpla1hn"; depends=[Rcpp RcppArmadillo]; }; - HELP = derive2 { name="HELP"; version="1.48.0"; sha256="1gdknw6ibnnjdr8qifr3kk3znpb99c2kz8cljdvl54rby0vz1qyc"; depends=[Biobase]; }; - HEM = derive2 { name="HEM"; version="1.62.0"; sha256="0gpnkjf1zqhmjali099frz1cswhgmjb42xrv74kcfajmbyrnnhmw"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.26.1"; sha256="08nm3bxga3plhg1kb3rpb00gh93npa3di6cg4q2q1yw4f79r67xl"; depends=[RcppParallel]; }; - HIPPO = derive2 { name="HIPPO"; version="1.2.0"; sha256="14sb6sznmal67dn56pamnaa4gyi0c0kvigwprja71ncrmzdqli4n"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; }; - HIREewas = derive2 { name="HIREewas"; version="1.8.0"; sha256="1r1qf1bj4v8cigijya01nxjqcfnisc885dj8jdzbryqb40zwjr3i"; depends=[gplots quadprog]; }; - HMMcopy = derive2 { name="HMMcopy"; version="1.32.0"; sha256="0x03sm64jhf6bxjpdy2aa4fzk9wj8i770schbyany1vsnw7ql4jb"; depends=[data_table]; }; - HPAStainR = derive2 { name="HPAStainR"; version="1.0.3"; sha256="09hl25jk928cq5wmmq2mivrbs4jwfqm7ra52416zb04cxhk586dn"; depends=[data_table dplyr scales shiny stringr tibble tidyr]; }; - HPAanalyze = derive2 { name="HPAanalyze"; version="1.8.1"; sha256="054irq7ppc0jx7r3lkry9vdvf2yyl8xsrjy1ac3ly05axm3j7l7m"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; }; - HTSFilter = derive2 { name="HTSFilter"; version="1.30.1"; sha256="14ffhz8635pqj8yywng92rs1k7yljf4dvfj6i305s7hm07g4h437"; depends=[Biobase BiocParallel DESeq2 edgeR]; }; - HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.20.0"; sha256="1ylg881wyp4sjhzgd7wx9033b7lpszb4pa9bp02vnmg0322y0i6p"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; - HTqPCR = derive2 { name="HTqPCR"; version="1.44.0"; sha256="1fzjx6psr41naq9ycpnv3lxlgkiyrpn7r2wl1i4gz45f3lax0yji"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harman = derive2 { name="Harman"; version="1.18.0"; sha256="0kbi6g5ddsasklwbx15rdznh8xbai59zs87ci3f0iyzaryzly23k"; depends=[Rcpp]; }; - Harshlight = derive2 { name="Harshlight"; version="1.62.0"; sha256="1bvsyw1qxzlzs5drr91x20462mq5m0w359vmv6xjq3c2dxlg9l8g"; depends=[affy altcdfenvs Biobase]; }; - Heatplus = derive2 { name="Heatplus"; version="2.36.0"; sha256="0vp8y0242k6q07yjk4sg2w7mlk5pgzhjgqkxa79c5ypkyp095a8n"; depends=[RColorBrewer]; }; - HelloRanges = derive2 { name="HelloRanges"; version="1.16.0"; sha256="1a2y8f10w4kg1iw6dpkxy4s6bkjsgdzrb2s15v6f0ra4i362zcnw"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - Herper = derive2 { name="Herper"; version="1.0.2"; sha256="1b7pd01i7f67iqgcgvglzikk7znl6xjxk4wia595c6i9df17dr0y"; depends=[reticulate rjson withr]; }; - HiCBricks = derive2 { name="HiCBricks"; version="1.8.0"; sha256="1whh53a47rfc3zwxlhxix5vsxcidbjl5hkydi55h05vw2c4yp859"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; }; - HiCcompare = derive2 { name="HiCcompare"; version="1.12.0"; sha256="1k9kcy7wl6fp6wmnkvyy7qjy54s0lam115kjgf3kkxndhsn6124c"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; }; - HiLDA = derive2 { name="HiLDA"; version="1.4.0"; sha256="197scxxcsvjh1dbzr743vr151fpq5xknzml26s1rm7y3cpa13dgh"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; }; - HiTC = derive2 { name="HiTC"; version="1.34.0"; sha256="1xbh36qgmzl8b6xq0hnl41li2x18yma50fq0v4dglh2ddn7as9iy"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.20.0"; sha256="0srqi6f00l5m4c71s8m42whbh1v09v6bq13ahziill0g9p8n35ax"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.48.0"; sha256="17204m3bl3bphzfil1h0f2hrpvcf1pwn29bhw0q3kida2dpkx1xj"; depends=[lattice]; }; - HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.48.0"; sha256="0vyv0iqzgvwxd2sabsg60xyj61ia8jwnywi2pcgp5dnzmlfnvg5r"; depends=[HilbertVis]; }; - HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.6.0"; sha256="12npxzdy7abzkf3zn80sm4h7wqp6narh2dik0mm228babpdl7f3w"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; }; - HybridMTest = derive2 { name="HybridMTest"; version="1.34.0"; sha256="1a16d6jigy8w3yq2ipr2d6jdb310alii1acyf1h7l1vbc102q50b"; depends=[Biobase fdrtool MASS survival]; }; - IHW = derive2 { name="IHW"; version="1.18.0"; sha256="04szg3bj5cjixxcp8j3inmj0fzk2mg8gp2w2b33x0im8ik24qiw0"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; - ILoReg = derive2 { name="ILoReg"; version="1.0.0"; sha256="0lgz9ry8pqyrlp18dr6db1fciwn6vnfx31z1f01mwyn833hyicry"; depends=[aricode cluster cowplot dendextend DescTools doRNG doSNOW dplyr fastcluster foreach ggplot2 LiblineaR Matrix parallelDist pheatmap plyr reshape2 RSpectra Rtsne S4Vectors scales SingleCellExperiment SparseM SummarizedExperiment umap]; }; - IMAS = derive2 { name="IMAS"; version="1.14.0"; sha256="0fs9lczlm72y1x9j43y9hg70jplgfkwiy15i71gmj7lwhj44wqix"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; - IMMAN = derive2 { name="IMMAN"; version="1.10.0"; sha256="0ainxxgldgmmfn29j0bg6c6q95w8jkv57w9a4ga5vi21j15a0dwx"; depends=[Biostrings igraph seqinr STRINGdb]; }; - IMPCdata = derive2 { name="IMPCdata"; version="1.26.0"; sha256="1f57qz79w1c8ngnbwbbbi6qrrbq58270qxyk0yx85lq6v3rdw5pi"; depends=[rjson]; }; - INDEED = derive2 { name="INDEED"; version="2.4.0"; sha256="0fz4yd909mwxl3arlgxadcivh21khbvsyfvmhcnkb05kkg59b06d"; depends=[devtools glasso igraph visNetwork]; }; - INPower = derive2 { name="INPower"; version="1.26.0"; sha256="1y7n42j0h3psfg1cqdzwxdfnzi4kn4h7pyp838fbmhfqhj4q82x1"; depends=[mvtnorm]; }; - INSPEcT = derive2 { name="INSPEcT"; version="1.20.0"; sha256="1jymvi5mf7vhs58zfh290pacfswgvkw09rmbirmr24kxcgl30483"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - IONiseR = derive2 { name="IONiseR"; version="2.14.0"; sha256="0cfa64d3qv881sa9d665rfki91jaz2spg0zfrb24m37948qzk1lx"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; - IPO = derive2 { name="IPO"; version="1.16.0"; sha256="128am1hdrf7v2y32vvjjfisw7vw2ill6bssgq8mak5fl93cnpb7l"; depends=[BiocParallel CAMERA rsm xcms]; }; - IRanges = derive2 { name="IRanges"; version="2.24.1"; sha256="01mx46a82vd3gz705pj0kk4wpxg683s8jqxchzjia3gz00b4qw52"; depends=[BiocGenerics S4Vectors]; }; - ISAnalytics = derive2 { name="ISAnalytics"; version="1.0.11"; sha256="0fc8pyjjbj0mp6nmhxcksfk1380dx5irkgfsh0in99yyjgjq6ig1"; depends=[BiocParallel data_table dplyr forcats fs ggplot2 ggrepel htmltools lifecycle lubridate magrittr psych purrr reactable readr readxl rlang stringr tibble tidyr upsetjs zip]; }; - ISoLDE = derive2 { name="ISoLDE"; version="1.18.1"; sha256="17xxyqv0qbwrvc4jnrw7h2cr158ayx959xkcfsci0di5j8gph4g5"; depends=[]; }; - ITALICS = derive2 { name="ITALICS"; version="2.50.0"; sha256="14bvnn5kpqla52s7kard8fwzbav75hzh8q087xrn54ixbcwdaksg"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; - IVAS = derive2 { name="IVAS"; version="2.10.0"; sha256="00wvcgf9aczhrrz169gr91h7fd4816ncz9cz0br06vf9203s58px"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; - IWTomics = derive2 { name="IWTomics"; version="1.14.0"; sha256="02mvp2mnb7zlzmhmb9md82k8vcb47kaf5k4bd07024ag960nx5wm"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; - Icens = derive2 { name="Icens"; version="1.62.0"; sha256="1w94mvh8pai77h4fcaiyacmzs58n4kbiq6bm4z0hk24j1ywph3dr"; depends=[survival]; }; - IdeoViz = derive2 { name="IdeoViz"; version="1.26.0"; sha256="1k5c0skr6pvpcvkak9f0a088w5wsx4fl3jb9a76gyyni4nkj7djq"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; - IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.4.0"; sha256="00102is1s2i7a9aar1mfc110i4aiqljmlsyzap9025q2rhrwcvcw"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; }; - Imetagene = derive2 { name="Imetagene"; version="1.19.0"; sha256="1p8v64nnavxgliv4diswiz7rwaw6k815f79aidb161vpasdjz99k"; depends=[ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.18.1"; sha256="06clvgsii3zpx89lgxyjq89wpcq755ff1pglnwggs0d6jc3ca5f3"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; }; - InPAS = derive2 { name="InPAS"; version="1.22.0"; sha256="0l9vddppnbx1gwyxvw5cxqc5pkgffdagss8v0dvw6m4629nwgawa"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; - InTAD = derive2 { name="InTAD"; version="1.10.0"; sha256="111z1r717h3qdn49y41zsnjjql8pnkf6zfi2pazp8xl2xdii4j5v"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; - Informeasure = derive2 { name="Informeasure"; version="1.0.0"; sha256="1v05fr4llgb3kdsz2zbq68l1bkjiqxhavbsii4q5j3vrkq1fnwfs"; depends=[entropy matrixStats]; }; - IntEREst = derive2 { name="IntEREst"; version="1.14.0"; sha256="0nk8186d08y9xyvjnl9p4pgllfm1lj7yz8mmfnkn5ci7nfaibrj5"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; - InterMineR = derive2 { name="InterMineR"; version="1.12.3"; sha256="1r6pci76psb6zdv6jvzckwmswykjy95p79g40g7cn3cik55cn7j9"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; - InteractionSet = derive2 { name="InteractionSet"; version="1.18.1"; sha256="0dx6yw6rxgkcidnnyjzv57vzd112nf9n2bj6dkv7r3a2d2wj6xh4"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; - IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.12.0"; sha256="12s14vlah0zdpg5k0j1a0210f3jz3p0raxra982z0lf4i8pgqsb6"; depends=[FGNet igraph knitr]; }; - IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.8.0"; sha256="0a29b4fscp6bb51qahrblgdml467m274yqc8c9078bsyn12a7111"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; - IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.6.0"; sha256="05pscfk626crw3kw4xjvjs72fd0s14f9kqmr7jszz4sb4f7r9fxh"; depends=[IsoCorrectoR readxl tcltk2]; }; - IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.26.0"; sha256="0f6zmmah5v8yv5hvjdp8bpqwpc80989y4m0x5yy5nyq9a24479qy"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.12.0"; sha256="0pv2ql65fbzdg2yy87acc2i1z89rw21a3cjmndx21zilyh9ahrg8"; depends=[BiocGenerics Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer RCurl readr reshape2 rtracklayer stringr tibble tximeta tximport VennDiagram XVector]; }; - KCsmart = derive2 { name="KCsmart"; version="2.48.0"; sha256="05r3gkh810ddbzxbw750xd1j49ng6pcgc6isdadsyvlqshxp4rmz"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.30.1"; sha256="0k9z85xf9la2y98xqmdmjb8mci9fh2fdybkl77x1yl26hyalip0s"; depends=[Biostrings httr png]; }; - KEGGgraph = derive2 { name="KEGGgraph"; version="1.50.0"; sha256="1h293hn02ysm923bh9gxk87xv663xiqchqcvpaxpla9c3yrgkx2v"; depends=[graph RCurl XML]; }; - KEGGlincs = derive2 { name="KEGGlincs"; version="1.16.0"; sha256="1cq3cvpvdgdl1ykkzmqs3h8kvjz35n57vhcd9hkrl4f1ahdn9ry5"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.32.0"; sha256="1480vi0s6lxgzs6nl4hb5wjn2mb4bznii3b3lfgapjhn8navaix6"; depends=[AnnotationDbi biomaRt ggplot2 KEGG_db KEGGREST png RCurl reshape2 TeachingDemos XML]; }; - KinSwingR = derive2 { name="KinSwingR"; version="1.8.0"; sha256="1029iq13mrblnhdbgnqhy4whnhykjqz2xi7avi75pmqawnmrmdzi"; depends=[BiocParallel data_table sqldf]; }; - KnowSeq = derive2 { name="KnowSeq"; version="1.4.5"; sha256="1zrw4jsy3cmydmknrzzlb6mir9pi3f2nbhsi107a9q4l1jviwc6s"; depends=[caret cqn e1071 edgeR ggplot2 gridExtra Hmisc httr jsonlite kernlab limma praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; }; - LACE = derive2 { name="LACE"; version="1.2.1"; sha256="0510v6m3if7jqf37jvdqpkpdfg9xkr0spgj1g2mjbncwbw0glr9g"; depends=[igraph RColorBrewer Rfast SummarizedExperiment]; }; - LBE = derive2 { name="LBE"; version="1.58.0"; sha256="1nb1cxh1gl86d6647kqsjvx6cr79fz279blk2gc11xq1j03scmvh"; depends=[]; }; - LEA = derive2 { name="LEA"; version="3.2.0"; sha256="1m8ir631n7fmpgzfb20lmwppf2sjiml9jw2484k7limnmal09pjz"; depends=[]; }; - LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.16.0"; sha256="10km3bqnlawpzf56asfj1wa930dsnakzwlmym7fmyj7dicvljp7z"; depends=[CAMERA xcms]; }; - LOLA = derive2 { name="LOLA"; version="1.20.0"; sha256="026q1jszmmkaw5mvmsmms983scny53f6b632rvsijw3p1907p6j1"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; - LPE = derive2 { name="LPE"; version="1.64.0"; sha256="0azzxa1yxwj9q2nwfas0831vvcwawgcfc95m1gsx45daxr8zbhww"; depends=[]; }; - LPEadj = derive2 { name="LPEadj"; version="1.50.0"; sha256="0p5x6aal0jykzkllrfx9dr46i9gvh2whxq0dnwasjg9k5pfi67l8"; depends=[LPE]; }; - LRBaseDbi = derive2 { name="LRBaseDbi"; version="2.0.0"; sha256="1f27v8ar1rcswhvflgbw9r4lmjx7nrqrk0yqaf5l0gdm7givxlih"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - LedPred = derive2 { name="LedPred"; version="1.24.0"; sha256="1gviwkc7h60mk8q76irkfhgk90inv3dkhph6h1c9rh9wzhnl296i"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; - LineagePulse = derive2 { name="LineagePulse"; version="1.10.0"; sha256="0n49gq8rhamhdpq0jrrs6l5zmnlpjcm0fwr5fsl063idws5zvs7g"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; - LinkHD = derive2 { name="LinkHD"; version="1.4.0"; sha256="10687gvkl256grriyc1abzm64vjzxiyfl1a1lfivcnfh17n36bd4"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; }; - Linnorm = derive2 { name="Linnorm"; version="2.14.0"; sha256="1is1kp5av01kqqph16xl7w1dqbyd0q85pgqfv9gqkk8m53635cz3"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; - LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.44.0"; sha256="1257994vdakm6mbr3jn5smmai4spzk0gx0yhjblqikh6n5l0hzzm"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - LoomExperiment = derive2 { name="LoomExperiment"; version="1.8.0"; sha256="1i7ihhdh7dxfvxab971c5gg5s2nqfjkphwwz6m6pnyxygh3298av"; depends=[DelayedArray GenomicRanges HDF5Array Matrix rhdf5 rtracklayer S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; - LowMACA = derive2 { name="LowMACA"; version="1.20.0"; sha256="1wazmngxrc1h1fcrvn790655dc5z03v6yi17b0w88bhrzfl190yc"; depends=[BiocParallel Biostrings cgdsr data_table gridBase httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - LymphoSeq = derive2 { name="LymphoSeq"; version="1.18.0"; sha256="06y0zhzfm03x8k2alxm3x82q0fzg7kq277i8r2shjkms4v4llgkq"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; - M3C = derive2 { name="M3C"; version="1.12.0"; sha256="05ygi4fd85hh17mlww5wcww8d5z5zvkn2r46s4n6g18mcbv8snv5"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; }; - M3Drop = derive2 { name="M3Drop"; version="1.16.0"; sha256="02q2zv6x3mxp9770l6xxp5dlbwgmspj79r2r5l5ynz796p958ngf"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; }; - MACPET = derive2 { name="MACPET"; version="1.10.0"; sha256="1a2mfqi74c5k29bgcgc98abgd8qrpd554fc4ngp9ljkk40hkms5p"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; - MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.4.0"; sha256="19nfw0fx7l18b50k5qvf5xnl3l35pgc8q2va2f0jbgzw6mz6a106"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; }; - MADSEQ = derive2 { name="MADSEQ"; version="1.16.0"; sha256="073fm6myv84qp1k428riyp1x21k367xdsxysw7sxf6hi2lrzxzwh"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; - MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.10.0"; sha256="0vw4lidr458d8ij8y5ny5b8avkjxnxxpc3rnc4z4dww3r4wqpdzm"; depends=[Biobase clusterProfiler enrichplot ggplot2 ggrepel gridExtra reshape2]; }; - MAIT = derive2 { name="MAIT"; version="1.24.0"; sha256="0glqfb4jvcd9kvzs3vfv9v9apiv60f1lwszxs8n345sf8qsl55ky"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; - MANOR = derive2 { name="MANOR"; version="1.62.0"; sha256="0gqxgk9bd0axsx2vvhy46g7zynpxw23659iirn3pcanqryi5nayh"; depends=[GLAD]; }; - MAST = derive2 { name="MAST"; version="1.16.0"; sha256="11qr7n9i4masqz0yzikddchyn223m8dy6zv461dly07fd43qi9mn"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; - MBASED = derive2 { name="MBASED"; version="1.24.0"; sha256="1igdji9xm0ya82c7jxdlf1zsksm02cx82f2jcspl376959f4cc1j"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; - MBAmethyl = derive2 { name="MBAmethyl"; version="1.24.0"; sha256="0zb5lk3w8rpb59zbx3zvpb7cb7jd4yxdfmwr0snb2zk6l2pj52gw"; depends=[]; }; - MBCB = derive2 { name="MBCB"; version="1.44.0"; sha256="0lsijrgqmhy8w5fdpgh3f38wb9nw9kx5lmngrmzn0i4byn5r2znm"; depends=[preprocessCore tcltk2]; }; - MBQN = derive2 { name="MBQN"; version="2.2.0"; sha256="13w1vg7syp0h9s5bmgm05rsyrmfj2rk3h113ggcvwbxkm9z20r97"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rpx SummarizedExperiment xml2]; }; - MBttest = derive2 { name="MBttest"; version="1.18.0"; sha256="0k8vapsik7hgkqbm584s7vzrq0zsmqj33g7biinzmf7pwdi0ynx5"; depends=[gplots gtools]; }; - MCbiclust = derive2 { name="MCbiclust"; version="1.14.0"; sha256="0660a9164q6gkhxzx2ss0qn2s4lpfmvdkyd1siyklnfqv2pc873q"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; - MDTS = derive2 { name="MDTS"; version="1.10.0"; sha256="0vyj8ysx869pvcpv49073wvmb9p2bhw8c8jqxgbkafmn6xf36j21"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; - MEAL = derive2 { name="MEAL"; version="1.20.4"; sha256="1agkg2x2dfgdmza863nb77zjm3svyiwrcia6qm398ndl2w3w34iw"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; - MEAT = derive2 { name="MEAT"; version="1.2.2"; sha256="1zf309n98z2dwd3y2chpw2g66v2fpv8sxqs53xg5y1f9qlzs3bq9"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; }; - MEB = derive2 { name="MEB"; version="1.4.0"; sha256="1x112265xi7ww7gvjfiqzcclimp6mpj30hqnyb0zq2r2fmvxfra7"; depends=[e1071 SummarizedExperiment]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.42.0"; sha256="1qg4466ddhkgqv8fpi72zrpygp4mw03nz5n1472y8s7chvjmfi3x"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; - MEDME = derive2 { name="MEDME"; version="1.50.0"; sha256="0ziqmvzwhbc2iszck25vc3yqq2ksb6vfsv1m914cqyvkgdlibz8a"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.24.0"; sha256="1zw7lwybhq7vipilfgqlb8gykgawjnq517hf28n0p61in9jqic2z"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.24.0"; sha256="1whfdwnigdyfl78gl0p5yr9r24m0jf6zk6rr58mn83fkb9d5c1gq"; depends=[annotate AnnotationDbi]; }; - MGFR = derive2 { name="MGFR"; version="1.16.0"; sha256="0drkjirwj922p9q450p60804ncqk120y63r1wiyai8b0ykmky0qp"; depends=[annotate biomaRt]; }; - MIGSA = derive2 { name="MIGSA"; version="1.14.1"; sha256="0mbxghm8l1k0fkxyh64gsh3is9jiwsslsjgf8yhflvnkvcma840d"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev jsonlite limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz vegan]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.28.1"; sha256="0gjwmm63xay3d75wnqwvj30h366zx2a6n4l3f2fbrkyf67fgysfq"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; }; - MIRA = derive2 { name="MIRA"; version="1.12.0"; sha256="1ad01xq1j0nf3mqkmb4xxs54fq3azj5h896ciz6294gqwqrhnp3v"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.70.0"; sha256="1j920h1657rc5agd1vrkzk126npfhw7pzr7p7gwg4i0h0wv25q3r"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny threejs]; }; - MLP = derive2 { name="MLP"; version="1.38.0"; sha256="0a9ax3jv30w55z6lljba1vd9x4azi7wd49zvr5aqar18yfscsjcv"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="2.8.0"; sha256="0wyfhfzrnllj0wjs4pbp0b6ighhg8m3wjknj6cwy6gd47f5m59bx"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; - MMAPPR2 = derive2 { name="MMAPPR2"; version="1.4.0"; sha256="1b7xvmig3p5gy7r8smhjb9j7w9hnp9smf56kfai5kwv4k406mffy"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; }; - MMDiff2 = derive2 { name="MMDiff2"; version="1.18.0"; sha256="15b8ib2cnlix6v6ls5xqw5hzc5y0n3pfd1qjxz6aiifk3qv05z8l"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; - MMUPHin = derive2 { name="MMUPHin"; version="1.4.2"; sha256="1kjckp7h7qx629vdx947b873zcxcbd6wg5f83ksh54pk0zfb4k9q"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor tidyr]; }; - MODA = derive2 { name="MODA"; version="1.16.0"; sha256="0jpvms8safpxl13hjmb5lnb5kj1qz1z8v7bsd44h7cf01wbxvzi6"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; - MOFA = derive2 { name="MOFA"; version="1.6.2"; sha256="0ay1sndc3abhypw8mjpls8lpwwfcaxykliqly8fafwn7daqrz4kz"; depends=[Biobase corrplot cowplot doParallel dplyr foreach GGally ggbeeswarm ggplot2 ggrepel MultiAssayExperiment pheatmap RColorBrewer reshape2 reticulate rhdf5 scales]; }; - MOFA2 = derive2 { name="MOFA2"; version="1.0.1"; sha256="0wq6p2ndiz5cfxyz0x2in4vnm1djhlkkfhwn4l8p3ja8zhmm20mw"; depends=[basilisk corrplot cowplot DelayedArray dplyr forcats GGally ggplot2 ggrepel HDF5Array magrittr pheatmap RColorBrewer reshape2 reticulate rhdf5 Rtsne tidyr uwot]; }; - MOGAMUN = derive2 { name="MOGAMUN"; version="1.0.1"; sha256="08cvfj2kr564ip6bhiv6rwmvn3mlddhl6w9cxcyd9rhavxj20ysw"; depends=[BiocParallel igraph RCy3 RUnit stringr]; }; - MOMA = derive2 { name="MOMA"; version="1.2.0"; sha256="1fc492901izqrp3whww72fv42sxbhqsmx7czrimbs5igibnx2hld"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; }; - MOSim = derive2 { name="MOSim"; version="1.4.0"; sha256="05p03sf6lcvxlkah990ppz9v5c1a8d5d1gldv4r6knb135f4rbsr"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; }; - MPFE = derive2 { name="MPFE"; version="1.26.0"; sha256="1ssim6g0clwkflwsiwm5r3pnqja79y49806mc7iq5i88xj64f5ph"; depends=[]; }; - MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.8.0"; sha256="0b1920ir5zkf5g5yd6kjgwc1ifv9x34mq1cc3hzn6fqwd01irnkh"; depends=[BiocParallel progress SummarizedExperiment]; }; - MSEADbi = derive2 { name="MSEADbi"; version="1.0.0"; sha256="0kk11kys70q1hacass6czyqywvphzcmsrfzlzgf6wb3xpv29znk3"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.24.0"; sha256="15zjd20xygjv5syxjwsl4j0xwagi37v58x8d40yfq0ldgbyw0di9"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.24.0"; sha256="1vz4zbhvm77bmk8wma8cclpafhzp7g59xfi0lmj88gxjbdzyvvxq"; depends=[mzID ProtGenerics]; }; - MSPrep = derive2 { name="MSPrep"; version="1.0.0"; sha256="0nb7xh45jixlmvnlx8yfjdpb6p85010hw48nm4iczd78qww5i1y6"; depends=[crmn ddpcr dplyr magrittr pcaMethods preprocessCore rlang S4Vectors stringr SummarizedExperiment sva tibble tidyr VIM]; }; - MSnID = derive2 { name="MSnID"; version="1.24.0"; sha256="05bncy7lw2a3h8xgnavjiz56pc6mk8q7l6qdd81197nawxs3j02d"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics BiocStyle Biostrings data_table doParallel dplyr foreach ggplot2 iterators msmsTests MSnbase mzID mzR ProtGenerics purrr R_cache Rcpp reshape2 rlang RUnit stringr tibble xtable]; }; - MSnbase = derive2 { name="MSnbase"; version="2.16.1"; sha256="0hxzs9zzljywqxr7q388hshpy1pdryhl0zkwffqbxpf5pcf92d3h"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; - MSstats = derive2 { name="MSstats"; version="3.22.1"; sha256="1v5591igcgjn2535lnhnkzlxkx7y3y0075i8anpx265d8rry5nma"; depends=[broom data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore purrr reshape2 snow statmod stringr survival tidyr]; }; - MSstatsConvert = derive2 { name="MSstatsConvert"; version="1.0.0"; sha256="0k46m7qj2qjdknrh2ck1rya5y9s684rwijqssz3mpcpd35dy48xl"; depends=[checkmate data_table log4r]; }; - MSstatsPTM = derive2 { name="MSstatsPTM"; version="1.0.0"; sha256="0dpsphpmlwwvzl91158kkmzh5ggdr5ab0zj6iiqq09p48q0vwqz4"; depends=[Biostrings broom dplyr rlang tibble tidyr tidyselect]; }; - MSstatsQC = derive2 { name="MSstatsQC"; version="2.8.0"; sha256="0pjqhj846n3mcbb4pk1smczhz9xz7ygb6a7b362najss2waism6f"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; }; - MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.10.0"; sha256="067y5zj9v7w5z4g4y1ni7i4c4qiis5a1wywffm1ndrvi1kvjsidj"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; }; - MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.4.0"; sha256="0lqgwl366f9fkf3svkgym1rk8rndydc7rm0w1wp25rm2ya2aqi30"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; }; - MSstatsTMT = derive2 { name="MSstatsTMT"; version="1.8.2"; sha256="1qwayg12fay30qz3cmjdb5sgds1xbvk540bpqz97180xmxwdi185"; depends=[data_table dplyr ggplot2 limma lme4 lmerTest matrixStats MSstats reshape2 statmod tidyr]; }; - MSstatsTMTPTM = derive2 { name="MSstatsTMTPTM"; version="1.0.2"; sha256="04igrlfbdmalqb42x6rir11n7ij6d69pb6v8irih1nbgxa0ffk0p"; depends=[dplyr ggplot2 gridExtra MSstatsTMT Rcpp reshape2 stringr]; }; - MVCClass = derive2 { name="MVCClass"; version="1.64.0"; sha256="0ndpkbj79kbr3scf4ajhm1v5ncz5jnx5g1crc04azq1l3c0n6x8p"; depends=[]; }; - MWASTools = derive2 { name="MWASTools"; version="1.14.0"; sha256="0pj0aafs4ynzvgx3vq7d2c4wjx771xj3494cgaxv20avwm1v3d9c"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; - Maaslin2 = derive2 { name="Maaslin2"; version="1.4.0"; sha256="0n48clyarmbp6g4sv1rg6v47jfsiicpcjyfhdnr7wlsr5yd1ww4s"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 glmmTMB hash lmerTest logging lpsymphony MASS metagenomeSeq MuMIn optparse pbapply pcaPP pheatmap pscl robustbase vegan]; }; - MantelCorr = derive2 { name="MantelCorr"; version="1.60.0"; sha256="1bhx0jbi6zmx5g21k0i2hdacbrzapbr5jkglpi06g7ky08vjakdg"; depends=[]; }; - MassArray = derive2 { name="MassArray"; version="1.42.0"; sha256="0wmm13k088bzv09sq34mnj6g0c78mhv5g11s5mgxsiclhq1hxqb9"; depends=[]; }; - MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.56.0"; sha256="1vvxbxc538raqdsy0x9ln41vjhp2aw1nrh4k35y3s9mhb1jlzzv3"; depends=[waveslim]; }; - MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.2.1"; sha256="163f0z33cv6038gcjdxn1hadcg9b09qgvm6zc5zn97y4rc8grkrb"; depends=[matrixStats]; }; - MatrixRider = derive2 { name="MatrixRider"; version="1.22.0"; sha256="09mip8fvysr59hp0sk0wvs9qxs9rq2gqcv4hv6259jdqa6b9k2zp"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.26.0"; sha256="1872r6b5w9abzawj8yb061mgn5fx91sf9x9gidi3fp5z0n6bhlf3"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; - MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.62.0"; sha256="0rahjshh5k04v2xcbcr3q0bdjwshfjwcg6i1bycdkxj7vxsd5wzs"; depends=[]; }; - Melissa = derive2 { name="Melissa"; version="1.6.0"; sha256="1jhjkd03lfsi6sarclckzzdzq0s0df6j1shdb2m7k9lcirpn8kpi"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; }; - Mergeomics = derive2 { name="Mergeomics"; version="1.18.0"; sha256="0lzb9j9fj1a5m963ldbi13k4yj1205z37slz597q7bfkp2lm8sv8"; depends=[]; }; - MesKit = derive2 { name="MesKit"; version="1.0.1"; sha256="0dszayy8425sdv14fai0m5sh3k1wv7yx2aqbr5z7iqr2pxgpswgy"; depends=[AnnotationDbi ape Biostrings circlize ComplexHeatmap cowplot data_table dplyr ggplot2 ggrepel ggridges IRanges mclust phangorn pracma RColorBrewer S4Vectors tidyr]; }; - MetCirc = derive2 { name="MetCirc"; version="1.20.0"; sha256="0az9qpyh986lddxb99c6g92syxnsh96dbgsms1ygimj5vzinmkwa"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; }; - MetID = derive2 { name="MetID"; version="1.8.0"; sha256="0hcb8hwavd5qk4qdkcvrm89j1l2s4qfkgcrb140xxsxp3hp4rdyy"; depends=[ChemmineR devtools igraph Matrix stringr]; }; - MetNet = derive2 { name="MetNet"; version="1.8.0"; sha256="1zhjr2bb8b2ln9jkrc6954cnapz9yjb3qm1vzs1sn1ra7bzb1rm8"; depends=[BiocParallel bnlearn GENIE3 mpmi parmigene ppcor sna stabs]; }; - MetaCyto = derive2 { name="MetaCyto"; version="1.12.0"; sha256="0xakf4njcly4fa064f5h074gba9adggdm57vxyqm8syznpm43mkj"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; - MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.10.0"; sha256="0chbxj98gm1gvcpqnpzh68r7rn2ggdx3l2jp42s5rqfn7axc1lhr"; depends=[beanplot dplyr ggplot2 gplots igraph Matrix matrixStats RColorBrewer SingleCellExperiment SummarizedExperiment tibble tidyr]; }; - MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.4.0"; sha256="1m73594p045pygihm1dhfzqlv9yjcfpw1fj4k5jbrdq3ki9pi7yc"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; }; - Metab = derive2 { name="Metab"; version="1.24.0"; sha256="0kax2fghjv7f6w841fwhyzmcij1wv6vla0n1l7xfpdw7j8rq5d1n"; depends=[pander svDialogs xcms]; }; - MetaboSignal = derive2 { name="MetaboSignal"; version="1.20.0"; sha256="1nsr75svdznz6m4imc3l3an72n21f5pf3qacmzrrwszyxlcgpbxx"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; - MethCP = derive2 { name="MethCP"; version="1.4.0"; sha256="06jw5zg53lv61ip1m0iaqzdg23v6fclnlbvy0ii0fpjpw216mpyq"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; }; - MethPed = derive2 { name="MethPed"; version="1.18.0"; sha256="1lmjh16rdsm39gmsxqrlkasa4hkd7i6ag8rp22nlnkkq120w41gv"; depends=[Biobase randomForest]; }; - MethReg = derive2 { name="MethReg"; version="1.0.0"; sha256="1azzia6zwm8i5j0x4ipfrqb5pzlxz1vvcqasflwj5kj6sd5n33kr"; depends=[DelayedArray dplyr GenomicRanges ggplot2 ggpubr IRanges MASS Matrix plyr progress pscl readr rlang S4Vectors sesameData sfsmisc stringr SummarizedExperiment tibble tidyr]; }; - MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.22.0"; sha256="1bdg3z18mqawm8s6xwmp52rj2v55vajgm97a5dych1pwjxzhl33r"; depends=[Biostrings gplots seqinr stringr]; }; - MethylAid = derive2 { name="MethylAid"; version="1.24.0"; sha256="0sbfs75d4bddrdiany7mqg9lr3rwgpr82vm8588130290y6ssdyr"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; - MethylMix = derive2 { name="MethylMix"; version="2.20.0"; sha256="1w4mcxr2yr9ky37skgiiqrxbzk3kykb6lr5jp52c3zhd9hvpbi18"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.30.0"; sha256="0x2rijjyr49d414hs21zpqyz0cs50wmf7wr4n3mwczwfwv53rrzk"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; - Mfuzz = derive2 { name="Mfuzz"; version="2.50.0"; sha256="0bnf3b69fr09v4wnmnjy7gwb5x3zaakrz3m1jlfj2q7pzf3rbglz"; depends=[Biobase e1071 tkWidgets]; }; - MiChip = derive2 { name="MiChip"; version="1.44.0"; sha256="17l937238n8i2ra7apamz1hb9y387wxkab2by7adjqr2gxndfyw0"; depends=[Biobase]; }; - MiPP = derive2 { name="MiPP"; version="1.62.0"; sha256="0ki9rbvnr5zbygxc2qpz1kjja5bbyf49ir8cczh4ywng2limzk8z"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.32.0"; sha256="12441p6ibi21l3fb3rp77i3s06jz9vsd7jmvgmh051d45s6hbhdx"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; - MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.2.2"; sha256="1kpd95z8jkj90ycmklcpjc2vpy5scs2lrnpdyvmkkg82m4zblcgl"; depends=[ape Biostrings coin dplyr ggplot2 ggrepel ggsignif ggstar ggtree gtools magrittr MASS patchwork phyloseq plyr reshape rlang Rmisc tibble tidyr tidytree vegan zoo]; }; - MineICA = derive2 { name="MineICA"; version="1.30.0"; sha256="0xrc9hr8fwj57x8yvvncp2iyyd9ym5d7n0h520mn7c5m7shzhvcl"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; - MinimumDistance = derive2 { name="MinimumDistance"; version="1.34.0"; sha256="0psq3yhwl02n1k8g8s1xgmj87kwjp0rgn582d356q184j0skvynk"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Modstrings = derive2 { name="Modstrings"; version="1.6.0"; sha256="0cxph4d4kqspqi3hw2k9xm9jbdng0a9v1dag507v9d98pvvd5i98"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; }; - MoonlightR = derive2 { name="MoonlightR"; version="1.16.0"; sha256="1lz7100nd3i4hhi54ad13f0vi79wrhfx128yhbp3v07x8ragxcwa"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; - MotifDb = derive2 { name="MotifDb"; version="1.32.0"; sha256="0gfk1dgw7gd2y4cnmfdzpzjqkvvikcwx20h0fp7aiq8f0zfwlav5"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; }; - MouseFM = derive2 { name="MouseFM"; version="1.0.0"; sha256="1qs56cp46myymkwz8kl1q75m81dd184z7m327w9m53lrlx0yp40g"; depends=[biomaRt curl data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gtools httr IRanges jsonlite reshape2 rlist scales tidyr]; }; - MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.2.0"; sha256="0fa3bcf2cmzf5y8wjs7pnzs26qwgqnrrl4hj4sa4fp9kv8z80630"; depends=[MASS Rcpp S4Vectors]; }; - Mulcom = derive2 { name="Mulcom"; version="1.40.0"; sha256="02kxasxc326wr4phgfzk8vaz7xwc0chq8ygxrn405afizvy020s9"; depends=[Biobase fields]; }; - MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.16.0"; sha256="1nx3gikl8vr54862h6wl0q30arnpynla085219lhh61ziswdffrs"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; - MultiBaC = derive2 { name="MultiBaC"; version="1.0.0"; sha256="1873dl8dddfxh7jxc3w3x9lywlhv93fg0pw2livbkhpfcnhy9csr"; depends=[ggplot2 Matrix MultiAssayExperiment ropls]; }; - MultiDataSet = derive2 { name="MultiDataSet"; version="1.18.2"; sha256="1wzhxgprriicw6lx1h91z4r9d5yaxar859scp83bm8pr9aznqk2z"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; - MultiMed = derive2 { name="MultiMed"; version="2.12.0"; sha256="0p3h2fvi37qa6h22zzxqg2sa61w3cagjcj1nxa7vr09m6x5f87zs"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="3.0.1"; sha256="1988kjjgq8af0hj7chhpxi88717wwmzs9qgrwapjh0hm2hjwhn35"; depends=[BiocGenerics Biostrings BSgenome cowplot dplyr GenomeInfoDb GenomicRanges ggalluvial ggdendro ggplot2 IRanges magrittr NMF pracma purrr S4Vectors stringr tibble tidyr VariantAnnotation]; }; - NADfinder = derive2 { name="NADfinder"; version="1.14.0"; sha256="1iwab27dcqq7kd8yhrk4jdzsalvjb43193ib8b0vicpans8nwsn1"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; - NBAMSeq = derive2 { name="NBAMSeq"; version="1.6.1"; sha256="15vi65j2k48z97sk3dx8j0vdqi3iya8664lixd6bdih79vz7x3g6"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; }; - NBSplice = derive2 { name="NBSplice"; version="1.8.0"; sha256="16axfb0y31fln5h6pzjx58708np3hg60xajhdsbsgrl8y7zigr71"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; - NCIgraph = derive2 { name="NCIgraph"; version="1.38.0"; sha256="1fs9m1vnjsazfnwkps17rqkpawdr9ljg9nqnfbwrq1k21mhbv5ls"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; - NOISeq = derive2 { name="NOISeq"; version="2.34.0"; sha256="08qlavakclgzk345bliam4cfjhsy39n4s6m1biqpq94n9qp00x8f"; depends=[Biobase Matrix]; }; - NPARC = derive2 { name="NPARC"; version="1.2.0"; sha256="00f54chcd8zpgb363k6ljqygpl5gi4rh8pxknw4520w871qgh4gb"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; }; - NTW = derive2 { name="NTW"; version="1.40.0"; sha256="04mpry81k1d35x4nq14p8f2wnmkhwc0sldzifnhcfhbxib21nr7l"; depends=[mvtnorm]; }; - NanoMethViz = derive2 { name="NanoMethViz"; version="1.0.0"; sha256="11y4353lsf2hc8099pcrlgvx9dfir71z6hhrryj3jslgbgn3igpj"; depends=[AnnotationDbi assertthat bsseq data_table dplyr e1071 forcats fs GenomicRanges ggplot2 ggthemes glue patchwork purrr Rcpp readr rlang Rsamtools RSQLite S4Vectors scales stringr SummarizedExperiment tibble tidyr zlibbioc]; }; - NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.20.0"; sha256="0jy27d0ffb8cxa24ncy9h2cckmaf1k02w64k7ak73w7izr9h99qs"; depends=[Biobase matrixStats Rcpp]; }; - NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.22.0"; sha256="16kmnlnrjama307n2ajmw5k374pa21yxnfdap89q909v49s63yzc"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; - Nebulosa = derive2 { name="Nebulosa"; version="1.0.2"; sha256="1qgq41x3k9w180g94gv3hkxkn4asjqq7gp4r21cgf9jr78gnikpc"; depends=[ggplot2 ks Matrix patchwork Seurat SeuratObject SingleCellExperiment SummarizedExperiment]; }; - NeighborNet = derive2 { name="NeighborNet"; version="1.8.0"; sha256="1pshg9diynd2rw8z7ia0yqdgnirr1awsria9r42rfvrwgksl1j92"; depends=[graph]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.26.0"; sha256="1dhfxqfqxq8cv7dhgw0s3xxy8b7az6wdd6plhq9jwflw000w11yi"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.30.0"; sha256="1gy9mcmnynjiajiq4gyr9fdkrdjpgw4r78hb8b5xw9aajxz7jghh"; depends=[graph igraph seriation]; }; - NewWave = derive2 { name="NewWave"; version="1.0.2"; sha256="1nhgkkpai6jpqhqimnd1b8mjgcm9xfk2jkap0ymb6344gidysf7q"; depends=[BiocSingular DelayedArray irlba Matrix SharedObject SingleCellExperiment SummarizedExperiment]; }; - NoRCE = derive2 { name="NoRCE"; version="1.2.0"; sha256="1s0xddh6ywhqyslm5s1hh7sirsmg2z4phd4q2zxjsf3k8h423690"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors SummarizedExperiment tidyr zlibbioc]; }; - NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.8.0"; sha256="0ybvzfg4skdp0c2hd0x8ad2ldzx908a9414a5m8m2p7a9yn9xx5v"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.36.0"; sha256="09hv89dviwxaz0d253zh7bqag426f1cbwv84i0hrmhz2my26hwjd"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; - NuPoP = derive2 { name="NuPoP"; version="1.40.0"; sha256="1r99h8w4njmrpk08gi3wj2rc1gw5992zf7dnlgqcch305107l610"; depends=[]; }; - OCplus = derive2 { name="OCplus"; version="1.64.0"; sha256="1pl0f8927riyrnazark6blhcrl4h0krni4rsccn668c65a64sblr"; depends=[akima multtest]; }; - OLIN = derive2 { name="OLIN"; version="1.68.0"; sha256="175s2p6g8j4xw82n2byl06rjafk8myny9dnwmy7w631pz84dzz7c"; depends=[limma locfit marray]; }; - OLINgui = derive2 { name="OLINgui"; version="1.64.0"; sha256="0y8p0ma94lm2fi6sxmn777cf3p5wg3ilig092plwqc6nghk8g226"; depends=[marray OLIN tkWidgets widgetTools]; }; - OMICsPCA = derive2 { name="OMICsPCA"; version="1.8.0"; sha256="1ic9fr102gcvzgfp8yi86hbiy8qspmjdwd41kplc0ykbx1axvjvc"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; - OPWeight = derive2 { name="OPWeight"; version="1.12.0"; sha256="06yl1kpq5ijq7s7gbng0n61hr2idr5i8hgckgaxafp9pg1pdayjm"; depends=[MASS qvalue tibble]; }; - ORFik = derive2 { name="ORFik"; version="1.10.13"; sha256="0ghrsdf874b82gfmksr58lhlhfrkqy53cl85vgb160dz08kij7yl"; depends=[AnnotationDbi BiocGenerics BiocParallel biomartr Biostrings BSgenome cowplot data_table DESeq2 fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra IRanges R_utils Rcpp RCurl Rsamtools rtracklayer S4Vectors SummarizedExperiment xml2]; }; - OSAT = derive2 { name="OSAT"; version="1.38.0"; sha256="19zcr00ig1b5zca1mh9k4z21rpxyx4njdy90zvz6yyrlb1q54zs7"; depends=[]; }; - OTUbase = derive2 { name="OTUbase"; version="1.40.0"; sha256="0y70ki13frf50y1qpd2lkjwxj1q5ri4ql1ic2vns11i86kj6msrc"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OUTRIDER = derive2 { name="OUTRIDER"; version="1.8.0"; sha256="0rzb7fdgw4iq8gn2a8lm3hgnnxfywkhf9kx9yl4ylxq4lf4n6iyj"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment]; }; - OVESEG = derive2 { name="OVESEG"; version="1.6.0"; sha256="0ynzjf0yp78762rfi5j59aj81csbwgviclv8qwdf71bfgjahqzj1"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; }; - OmaDB = derive2 { name="OmaDB"; version="2.6.1"; sha256="11ij29i0k7hwpbfwnsd1sr9fr52dc5vjwmkwv5s0fzmahl4mbwcs"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; - OmicCircos = derive2 { name="OmicCircos"; version="1.28.0"; sha256="066wn2vf965r98d5j05ig1ah2j2ycgjm7krx9cpprdvdak2xfz44"; depends=[GenomicRanges]; }; - OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.6.0"; sha256="0ynjca24mzr902lcima59w4gaazdg7yxhhn88dqalkx20nzxr82k"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; }; - Omixer = derive2 { name="Omixer"; version="1.0.4"; sha256="0bdfprq3s3mhnj7xrvkh3gphpa87cw3yfi3gddhbhm6nxm7lya0b"; depends=[dplyr forcats ggplot2 gridExtra magrittr readr stringr tibble tidyselect]; }; - OmnipathR = derive2 { name="OmnipathR"; version="2.0.0"; sha256="18v5kbq7r61r1s69rcssgqfw5733i61npx3831bw7by9q5z826mi"; depends=[dplyr igraph jsonlite rlang tidyr]; }; - Onassis = derive2 { name="Onassis"; version="1.12.0"; sha256="18rypslkr13a6ifgdr813cmq3n6v2mbdl23298iq6wfzl9i1cak8"; depends=[AnnotationDbi clusteval data_table dendextend DT GEOmetadb ggfortify ggplot2 knitr OnassisJavaLibs RCurl rJava RSQLite Rtsne]; }; - OncoScore = derive2 { name="OncoScore"; version="1.18.0"; sha256="0z9js0s8s50lfa4qkqp8rh72l2l4v5wc7bgwp69cn8czfllf00n8"; depends=[biomaRt]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.20.0"; sha256="0q0d7iy9z3v8154cxkdhw326cy4dra4aq9006lcysb1vrb7zxd72"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr]; }; - OpenStats = derive2 { name="OpenStats"; version="1.2.0"; sha256="0378q1qwyx78i4y1q4wz6mf22h38cv63wynvgpdcz3bs84sn56p1"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; }; - OrderedList = derive2 { name="OrderedList"; version="1.62.0"; sha256="1wng47d64m3xy4w6awfs3wfqag599083avcrvjca5ac9ff88qd4q"; depends=[Biobase twilight]; }; - Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.18.0"; sha256="0ldyx6jmpd97h13wq66pdslfws472abdws9nlymrf28rl23hpwvz"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang RSQLite S4Vectors tibble]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.32.0"; sha256="1mklnzs0d0ygcdibwfnk5xqr8ln6wpa00qcaw9c68m342kql0jqw"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; - Oscope = derive2 { name="Oscope"; version="1.20.0"; sha256="1am1zm39jaqdsxjrf09f5nbx58rd4shzvjp19lw7av7iq2r222g1"; depends=[BiocParallel cluster EBSeq testthat]; }; - OutlierD = derive2 { name="OutlierD"; version="1.53.0"; sha256="1hvs3r9zwif0f3dbskx1rhkah5m001xk42qx7mw93fp4khdda715"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.24.0"; sha256="1q6r7vr6q7x52p4dirnl1d1z9plyh0w51bmrqchwx5grafymwbgg"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; - PADOG = derive2 { name="PADOG"; version="1.32.0"; sha256="0fibiprx5xg8xdn5rdszk8iyw2m1mqq623r4k5fd4k1alsi28kl0"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; }; - PAIRADISE = derive2 { name="PAIRADISE"; version="1.6.0"; sha256="1gca2n30kwpw4465qz2q6raq8kzn4iqxy5h7l5srmwhcq0nkz40j"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; }; - PANR = derive2 { name="PANR"; version="1.36.0"; sha256="0yw82gybyb49rd15vicsklw0b08l62miyg6jly465sa0ffyyzvri"; depends=[igraph MASS pvclust RedeR]; }; - PAST = derive2 { name="PAST"; version="1.6.0"; sha256="19id9icnzsjhnpqg41fwvfk6ck67c5yc2wwlkd0yncksb7srwp5g"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; }; - PCAN = derive2 { name="PCAN"; version="1.18.0"; sha256="00b2f53fm5czkwdx7yh7ycn2zih9c6bxq2a4mnyp4hz37b3v798r"; depends=[BiocParallel]; }; - PCAtools = derive2 { name="PCAtools"; version="2.2.0"; sha256="1fz9h99yyn49b5rcnkg2kjdfmczfwnc44fpwbia0izj6gx192phb"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; }; - PCpheno = derive2 { name="PCpheno"; version="1.52.0"; sha256="1hgzgajd5gp5pkkp01idrczprahh3x2pi5jg6d9vi1p3112q3953"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; - PECA = derive2 { name="PECA"; version="1.26.0"; sha256="1ww9vb00j7hskk26qjkxxil51brgax468p0kwv6wrj8jq514cajy"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; - PERFect = derive2 { name="PERFect"; version="1.4.0"; sha256="0hjbmq9j31mcyywmx63j8wsh7pnmgc6ax85qslx8dzdl828ggwwc"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; }; - PGA = derive2 { name="PGA"; version="1.20.0"; sha256="0mfcjrr3vknj456xffndggpfcsiqp8nyk287n7y4if9hllsg4axf"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table dplyr GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap processx RCurl readr Rsamtools RSQLite rtracklayer S4Vectors seqinr stringr VariantAnnotation]; }; - PICS = derive2 { name="PICS"; version="2.34.0"; sha256="1kmgz09p74p1giklscmv434i5fz1jadqzh78rl04w8lk1m1cpmq9"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - PING = derive2 { name="PING"; version="2.34.0"; sha256="17jhb9592k9jl4cyjwn49wr2yw0afgs1qp6l43yf589ack9sbhpc"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; - PLPE = derive2 { name="PLPE"; version="1.50.0"; sha256="19hvg6gxykc84gx2vcka48wh18iiq6984dp0pnhrd1vrfl8qpypx"; depends=[Biobase LPE MASS]; }; - POMA = derive2 { name="POMA"; version="1.0.0"; sha256="15q92070s6bvv443ypff51paqmq5fnymf53lb8mhsfrdcscnlh8d"; depends=[Biobase broom caret clisymbols ComplexHeatmap crayon dplyr e1071 ggcorrplot ggplot2 ggraph ggrepel glasso glmnet impute knitr limma magrittr mixOmics MSnbase patchwork plotly qpdf randomForest RankProd reshape2 rmarkdown tibble tidyr vegan]; }; - POST = derive2 { name="POST"; version="1.14.0"; sha256="1inwdzhj9p69nziqbamz6ycxvgh3i88418bhr6xvdziwq2245987"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; - PPInfer = derive2 { name="PPInfer"; version="1.16.0"; sha256="0n93yg4fsnrag9bb93mygafaq5y9yp7kchd1gph042lvbb6hvv1z"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; - PREDA = derive2 { name="PREDA"; version="1.36.0"; sha256="06f54qayprzfl7z0cp56yjxcsb8yfnsk59600q4cm7wqc0hlwnbm"; depends=[annotate Biobase lokern multtest]; }; - PROMISE = derive2 { name="PROMISE"; version="1.42.0"; sha256="15ngkkdpwkskjmmgz1zxrqva5crszkx4867v5n52gbjndkqc28cy"; depends=[Biobase GSEABase]; }; - PROPER = derive2 { name="PROPER"; version="1.22.0"; sha256="0g79c3hxnv3n9hnqf5sdhss8crmdpnbgpsppb0vgwd425g3kvhxp"; depends=[edgeR]; }; - PROPS = derive2 { name="PROPS"; version="1.12.0"; sha256="0wz8jz8n271sxbca4xjgnmv7pj2xn5lm0phy3vykwnirsmjkb8sr"; depends=[Biobase bnlearn reshape2 sva]; }; - PROcess = derive2 { name="PROcess"; version="1.66.0"; sha256="1j7n75fqncd05lywih70y3bwk8s25pcvzx1a1nmfdspswv0mr6wb"; depends=[Icens]; }; - PSEA = derive2 { name="PSEA"; version="1.24.0"; sha256="1fw2bmdvwkw1bny21lriipjf2idkf4cx8vmh36kz9x5rwzbw7939"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.28.0"; sha256="1qxs981s4ic3f5ihzl3292ylq90dakjl0g8vry9mds5zd1xb2i8k"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; - PWMEnrich = derive2 { name="PWMEnrich"; version="4.26.0"; sha256="1wvqj4i4ik664cnc2sl6n292zwsbrsj8lp28y1xfwrlgfqfrnibp"; depends=[BiocGenerics Biostrings evd gdata S4Vectors seqLogo]; }; - PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.18.0"; sha256="0qvqibj53mw9hdx466wq92z1nyl8xrd4q1sr0lzkjmnvi2z08av1"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; - Path2PPI = derive2 { name="Path2PPI"; version="1.20.0"; sha256="0y2m5vcifjyrdrnj4w2dmd9rjkj8m2a3jmkvh60wggli4dx7xzpg"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.30.0"; sha256="1q3ipc4r2w3hg7yac8cj4i5fjqc74wqzr2jdcbbb1zp7c94hcyw5"; depends=[]; }; - PathoStat = derive2 { name="PathoStat"; version="1.16.0"; sha256="05hf4i66b7kn3gy0jdl690x190i6h2f72msl47hnskmxrn9zpb9v"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; - PeacoQC = derive2 { name="PeacoQC"; version="0.99.25"; sha256="1qqcnlsw8fqqrq2xnajr98mb05p37vg2g47qkx5mg826zdgffq6l"; depends=[circlize ComplexHeatmap flowCore flowWorkspace ggplot2 gridExtra plyr]; }; - PepsNMR = derive2 { name="PepsNMR"; version="1.8.1"; sha256="09xbfi0ch4n9zvsamfy3k1v3za7sf5d0f4bkzc2y59r1qa2zgn1r"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="2.2.4"; sha256="10dr7dkaqayy8i5n762a246r36kfs1a8x00asdhxs56srwxw628l"; depends=[Biobase BiocParallel caTools CoreGx data_table downloader ggplot2 jsonlite magicaxis RColorBrewer reshape2 S4Vectors SummarizedExperiment]; }; - PhenStat = derive2 { name="PhenStat"; version="2.26.0"; sha256="0npf9ddmfh6752cjzmjxzvmp4sl0ml32xjiwii1f76416n0l6jla"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; - PhosR = derive2 { name="PhosR"; version="1.0.0"; sha256="0lpfwqz1z85lwn249kzf1bz4w3dympydacd67m7ls8wgr1m6zk58"; depends=[calibrate circlize dendextend dplyr e1071 igraph limma pcaMethods pheatmap preprocessCore RColorBrewer rlang ruv tidyr]; }; - PhyloProfile = derive2 { name="PhyloProfile"; version="1.4.11"; sha256="1g0hjk58w5srbnszjbccgc7ir8ykqmc0m5hxbq2qiv82la1hadgm"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer shiny shinyBS shinyjs xml2 zoo]; }; - Pi = derive2 { name="Pi"; version="2.2.1"; sha256="16xq9d5hm6wlnjj9qajk177a7barnbr8dlk7c8xfmanrqsjxvck0"; depends=[BiocGenerics caret dnet dplyr GenomeInfoDb GenomicRanges ggbio ggnetwork ggplot2 ggrepel glmnet Gviz igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; }; - Pigengene = derive2 { name="Pigengene"; version="1.16.0"; sha256="1bh7bkmwczs7lmylxmy4bm2sz3h2ymkwr6y3pbgsdkgpjpjdk00r"; depends=[bnlearn C50 dplyr gdata GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; - PloGO2 = derive2 { name="PloGO2"; version="1.2.0"; sha256="1ccncgam6absw32l5hjvzw3hdbr9fj92c0d65xw4i623amw3cana"; depends=[GO_db GOstats httr lattice openxlsx xtable]; }; - PoTRA = derive2 { name="PoTRA"; version="1.6.0"; sha256="185lf93amfad57l7pr7iyz2q5wycrilph7y2gzcdfz2pj9q9na7c"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; }; - Polyfit = derive2 { name="Polyfit"; version="1.24.0"; sha256="0xpsza6dzjwnm152bpgsc06cq9kvjd4v29x1syl4zfr7yzp9kvgb"; depends=[]; }; - PrInCE = derive2 { name="PrInCE"; version="1.6.0"; sha256="0mfm3jpnk1lps5c3dbwkmj9zl9ja2k27y129rkz8fpanyv91pyr3"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; }; - PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.6.0"; sha256="0zp3f7br9251cn9nrr2ij859pmf64xjjab14m7492vpckkj6zn7b"; depends=[BiocParallel biomaRt brglm cgdsr data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; }; - Prostar = derive2 { name="Prostar"; version="1.22.10"; sha256="11cn0ny7aha2glrk6qkhb20rl4zknk95sfv39xb5xs78z7v4mq7q"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets tibble webshot XML]; }; - ProtGenerics = derive2 { name="ProtGenerics"; version="1.22.0"; sha256="0yihxphgkshvfv1sn67wc4zvr2zlzws2j7ki3zabm6vyfkfdkfiz"; depends=[]; }; - ProteoMM = derive2 { name="ProteoMM"; version="1.8.0"; sha256="0sp2cqibk2lkxbzwpy6w8wvc3bc4afkmmg41nbp8qck2j95fafzh"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.20.0"; sha256="0wz3khiwgcxwz0n8gyaiacj44fz5rnljbzax05pzyzqmkkjzlqp9"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; - PubScore = derive2 { name="PubScore"; version="1.2.0"; sha256="1hhpbv8pq363c9pdp3krf1c22bdl9pfjc8vhl7dh0d1s6ry5jvqn"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; }; - PureCN = derive2 { name="PureCN"; version="1.20.0"; sha256="1hkplgs3bwwg84j7bh1r0hibsmxlffrw1bn5dc0r7l8k7kqmkiig"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; - Pviz = derive2 { name="Pviz"; version="1.24.0"; sha256="1nzl9z5axp3jh8p094l4r63vaqjvs39bvnnvqjfz4qcavirsb6lj"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; - QDNAseq = derive2 { name="QDNAseq"; version="1.26.0"; sha256="1njka1ldaj12id3m2z8ghlrm2lg0n5pxsxyv5gpjnsiabnnaw6ph"; depends=[Biobase CGHbase CGHcall DNAcopy future future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; - QFeatures = derive2 { name="QFeatures"; version="1.0.0"; sha256="03vk6358cif41pcqhyia6r3a5j3qaxk52ac1jski1idvq3x5l5i2"; depends=[AnnotationFilter Biobase BiocGenerics IRanges lazyeval MsCoreUtils MultiAssayExperiment ProtGenerics S4Vectors SummarizedExperiment]; }; - QSutils = derive2 { name="QSutils"; version="1.8.0"; sha256="1p3dvckb1qnk6xnm5fhvq8vw52dcx3g92zrr5d91irvdw8zz38i6"; depends=[ape BiocGenerics Biostrings psych]; }; - QUBIC = derive2 { name="QUBIC"; version="1.18.0"; sha256="0jq3x0rkpwim7fama68d8wv069ylhb0nhq4yi38lq3ijglqyf1j5"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; - Qtlizer = derive2 { name="Qtlizer"; version="1.4.0"; sha256="11i5ggds69ydkg0fdgim53blznz27w2ciwbgm0b8h03khf1k35ys"; depends=[curl GenomicRanges httr stringi]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.22.0"; sha256="0agmdx9bmm394yl83q43ly9mnmnrg3fddxsxx987ciwk9ckqhm4l"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.30.0"; sha256="032m01q34nnmvbhcb2g3pz2fqmgcw5464m74m1m0h7x9bl04a5k8"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhisat2 Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; }; - QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.24.0"; sha256="0rv1n22w3smaififkwr90v4amyy8dndd7w2z577dvkxjl1j6pbdw"; depends=[dplyr Rcpp yaml]; }; - R3CPET = derive2 { name="R3CPET"; version="1.22.0"; sha256="0gl9mgqhkvs0g9ck0lbjvfmc5h48l4cd0mv5ry608028ys2h7gmv"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; - R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.40.0"; sha256="134v6a77mwkcvxj98bri2hlnlqz0zb3ij9gvqky6gmb48vn49s42"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; - R4RNA = derive2 { name="R4RNA"; version="1.18.0"; sha256="07z8x8zh90axladjq4b5vii48xg1d86chc6jf8sc5x9rqs0rnj42"; depends=[Biostrings]; }; - RBGL = derive2 { name="RBGL"; version="1.66.0"; sha256="016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"; depends=[BH graph]; }; - RBM = derive2 { name="RBM"; version="1.22.0"; sha256="19r55j2sfc302qnsiyhjg0hf3sqh601chm9y3igg6sfmj3024kcv"; depends=[limma marray]; }; - RBioinf = derive2 { name="RBioinf"; version="1.50.0"; sha256="18kjh813rv3rg8lqjz0l3413iz5dmn09d0jrjy53bfr9h9qc9h89"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.16.0"; sha256="0vdxml618vqvf8xyh0zxs307p9zby0cj9dqyiiz625ilyq1hkw2m"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors]; }; - RCASPAR = derive2 { name="RCASPAR"; version="1.36.0"; sha256="0a85cmma32jir279f6p32nzx9wksycp27f6px4vcbmdp5r46wrpf"; depends=[]; }; - RCM = derive2 { name="RCM"; version="1.6.0"; sha256="1cl33ll8db998zcgcn5n9wc6krwpykvcz4xzikb70yxwzpna9mhb"; depends=[alabama edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries VGAM]; }; - RCy3 = derive2 { name="RCy3"; version="2.10.2"; sha256="1x4picqjd715y045wac754rpmm0n9km9svx336qybp8grvh3hfpb"; depends=[BiocGenerics graph httr igraph R_utils RJSONIO XML]; }; - RCyjs = derive2 { name="RCyjs"; version="2.12.0"; sha256="1176ynr6w5g2wgv6ayzsjmhnpm9nk82ah1lpy8b1aw2b1vz9m1dg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; - RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.28.0"; sha256="0k79gz9q6rhfvdzzy3kk53x7qhcfy8abc9lxm4cbc0g5i7gyab48"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; - RDRToolbox = derive2 { name="RDRToolbox"; version="1.40.0"; sha256="1z44xkm1dfj17vmfzfnfrz70p97xag5w3q0hfan90hkyqh9gmhzm"; depends=[MASS rgl]; }; - REBET = derive2 { name="REBET"; version="1.8.0"; sha256="10xr81wm8dk07w3kxg7x90yc4hr71k5j9q0y3xy1q4q0xz64cni1"; depends=[ASSET]; }; - REDseq = derive2 { name="REDseq"; version="1.36.0"; sha256="15snzi15zzz146lcjq8a1pdizi190rl5lb8vcjybfrfnhqkjp5nv"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - REMP = derive2 { name="REMP"; version="1.14.0"; sha256="1yhsma1akk2gj70sp0mb45kzslb96y7g0bxb5hm0f5lmyyhwymd1"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; }; - RGMQL = derive2 { name="RGMQL"; version="1.10.0"; sha256="021hn0ws47imhqdcc6ywlwbsjjykqr070hrg4ncb9hid1wfshjqy"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; - RGSEA = derive2 { name="RGSEA"; version="1.24.0"; sha256="0xflgqzd7w8jscvpqfr271wi6kp46f98g5lz51hgxidjlq8ay7mh"; depends=[BiocGenerics]; }; - RGalaxy = derive2 { name="RGalaxy"; version="1.34.0"; sha256="1kk5nka7bm8w1lmjh05gmyy5ccf6glq3z9xrp89114g5bqdzcxf0"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; - RGraph2js = derive2 { name="RGraph2js"; version="1.18.0"; sha256="0axmchp0i9chh2ihf8hm3kq9frn09wgjr2ph9xvbcbmfa79bj1qg"; depends=[digest graph rjson whisker]; }; - RIPAT = derive2 { name="RIPAT"; version="1.0.0"; sha256="1qvxvd2hw2ipzpy8v0r9yzq6r8rspn22q44377ikqvwnpahcj13s"; depends=[biomaRt GenomicRanges ggplot2 IRanges karyoploteR openxlsx plyr regioneR rtracklayer stringr]; }; - RITAN = derive2 { name="RITAN"; version="1.14.0"; sha256="0vxy3l9dyjasbjzrrh08nh23ic8ssr8r9z1mlnnyvy4wqqp2hx14"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; - RIVER = derive2 { name="RIVER"; version="1.14.0"; sha256="116c0l1inc8h7fdl58p8wxg779lxmwwjvkv02825x32nqxzqpy7w"; depends=[Biobase ggplot2 glmnet pROC]; }; - RImmPort = derive2 { name="RImmPort"; version="1.18.0"; sha256="0wqafg0lqj6m3hxkcahlix1p0sa9yvqwh526k5px222ca53pr9q8"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; - RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.14.0"; sha256="1dkm0q9kim1641iyj5qr434p0b148gz0dcp3zpqzzjcm1zhh8wck"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; - RLMM = derive2 { name="RLMM"; version="1.52.0"; sha256="0gk3zmw4qhyqy5byv3yrsv8gi5ndlvm4c4cifv1mwgclnk4dwka1"; depends=[MASS]; }; - RMassBank = derive2 { name="RMassBank"; version="3.0.0"; sha256="18wnr21qsrv51rb3xpj54cwr3yigd5aap8ljbz1x6pb9p2rhg2x9"; depends=[assertthat Biobase digest enviPat httr MSnbase mzR rcdk Rcpp rjson S4Vectors XML yaml]; }; - RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.2.0"; sha256="04y2djgjgvs0cszsnxvgpm37msc40pbvl59r9i2y53nqqhqmnmhx"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; }; - RNASeqPower = derive2 { name="RNASeqPower"; version="1.30.0"; sha256="0nwz8vy4yfamrimgycm4a9g3880d08dzxkyp6klrxk8cx8bky667"; depends=[]; }; - RNASeqR = derive2 { name="RNASeqR"; version="1.8.0"; sha256="1m1bs07c0jdgklxp4hxaz08ggvhm7h2ink3fmsn91awbaamdds2j"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; - RNAdecay = derive2 { name="RNAdecay"; version="1.10.0"; sha256="0v8x6a3bx2l7xs306lx6iyjwkz73f5vlzd1jahjwc11kgy2470ci"; depends=[ggplot2 gplots nloptr scales TMB]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.38.0"; sha256="0a7kbvb8k90sh9ldc16qz915ysam2f12cnwvynpfd926xpkqqi82"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.38.0"; sha256="1hhhv5ak7p040lcq0ayxvfrwld6qgkc80gabvvvp5zc18bynhdia"; depends=[biomaRt car geneplotter limma RankProd splots topGO]; }; - RNAmodR = derive2 { name="RNAmodR"; version="1.4.2"; sha256="0rhrpmq09zq6mq8bxdmds766mkh48r8nj3ln8r0wbswgq2kjf208"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors]; }; - RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.4.0"; sha256="13adv66g2zch415sx62sph9f2ydp8jmin0pmis4ralx4ysznkifg"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; - RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.4.0"; sha256="04mnq6h8rwrlazrg2dhzfcfgpm5r9qi7k7cwzf2pns8cx3np25q3"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; }; - RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.4.0"; sha256="04aq3wrmxdzydqkbyp36qy1cp8gqr52kl3jwpilhc484vy8cxphl"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; - RNAprobR = derive2 { name="RNAprobR"; version="1.22.0"; sha256="0527aqzhcm051g0kybnjg5djmfizbhvzsmw3zih85sy8fxypwcma"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; - RNAsense = derive2 { name="RNAsense"; version="1.4.0"; sha256="05ijjqanh6f1n75yi822vbs631516zhvlciqg4x22c1hznd8k7yw"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; }; - ROC = derive2 { name="ROC"; version="1.66.0"; sha256="02b9n42z3kjrfxpdf3glqvimd79nhnycq00mb09fzhkpp5zl43c9"; depends=[knitr]; }; - ROCpAI = derive2 { name="ROCpAI"; version="1.2.0"; sha256="0cp6k6nn7q1ssfdiwx1dx1nfzw2az5dw39g2bljw57vs0457s26q"; depends=[boot fission knitr SummarizedExperiment]; }; - ROSeq = derive2 { name="ROSeq"; version="1.2.10"; sha256="1mydcfcqkbmc2dr8nxy1fs0slgwvzbarpjz3vjqj5q3f44jbxcay"; depends=[edgeR limma pbmcapply]; }; - ROTS = derive2 { name="ROTS"; version="1.18.0"; sha256="0qk0gfhgr14g13zlfyf5101b5s8cma7j3r8a92q93h0axy8ka23n"; depends=[Biobase Rcpp]; }; - ROntoTools = derive2 { name="ROntoTools"; version="2.18.0"; sha256="1shj6hazl8d9rxpfr10rg1bd6nxhvmzrfarq4rpxpwnqgry68q2z"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.46.0"; sha256="02if4wq1jmls8g63hpx1q26x9cx6nbfg5s6rrmlrq0fsrk28wl7y"; depends=[affy BiocGenerics phyloseq]; }; - RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.2.0"; sha256="09n4ny3ymfkja2br4rrr2n9dzw3hs7qijhcq4mj0avr86i27llqz"; depends=[]; }; - RRHO = derive2 { name="RRHO"; version="1.30.0"; sha256="04hjp0kzfa8nwsm3yjy62sgidjy59rvzr512glhp9mgcf10lq4ws"; depends=[VennDiagram]; }; - RSVSim = derive2 { name="RSVSim"; version="1.30.0"; sha256="1hiw5b1idvyqr6ypjyy9vc2y48gjhnhdz1682ajpymjv6z54hnk3"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; - RSeqAn = derive2 { name="RSeqAn"; version="1.10.0"; sha256="0w1gr8c0jzavaf0l563a83cg7w6p2zxz3w5raxvlf42jzb86w8mw"; depends=[Rcpp]; }; - RTCA = derive2 { name="RTCA"; version="1.42.0"; sha256="17c09kc39ifpbnnhyikd20ng9z1dab2lds4cissgap266ik9y2c9"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.20.0"; sha256="0wnms4zwm3whxdxw5qw8xmkka9lwbnpyb8zqpk9vi3xgirnqjfr8"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.20.0"; sha256="1sh2akzhqf0gm3c2bway8a4i05lsqlny0wvixlilyxi5fgz839w7"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; - RTN = derive2 { name="RTN"; version="2.14.1"; sha256="0nsqs85icjhrpmyj311axivp5x8vrdi6csbng6377qr3lsm37xa6"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; }; - RTNduals = derive2 { name="RTNduals"; version="1.14.1"; sha256="08za6h73zbdz4mfsglhkfz1pjf476011a018vpvz1m4mkvias85f"; depends=[RTN]; }; - RTNsurvival = derive2 { name="RTNsurvival"; version="1.14.1"; sha256="02sphk1ivspkb8jnnppwrm0jpb5aa50f1yqpcxibh9049bc34bqn"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; }; - RTopper = derive2 { name="RTopper"; version="1.36.0"; sha256="1wjwzdqri60073f2iwh67vc1d3z5fiwmcd8xdf6lpqynbi7byxmj"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.24.0"; sha256="1anrybyrzpajr5434svyfbaypjai6x0ifsmqvjgimmxq3xqhv0jh"; depends=[Biobase EDASeq edgeR MASS]; }; - RUVcorr = derive2 { name="RUVcorr"; version="1.22.0"; sha256="0kvvallbqha0a9w2cbvqbivz0v2bsz2i7mzrw7x1810k4i2hjrdg"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; - RUVnormalize = derive2 { name="RUVnormalize"; version="1.24.0"; sha256="1zjgq2djwz3dc346hxqrxbmrnqxj02cxkxalcj6q996x7i01r9qg"; depends=[Biobase RUVnormalizeData]; }; - RVS = derive2 { name="RVS"; version="1.12.0"; sha256="03mx0vfzla9ag87lf2f1yr8mz42r8blibx9zrdajz2r4a73xa8x0"; depends=[GENLIB gRain kinship2 snpStats]; }; - RadioGx = derive2 { name="RadioGx"; version="1.0.0"; sha256="0p7cdm5hws1nmmjnrhwr2f5pgnjrc86973kxac6lckpl0cvr8h1r"; depends=[assertthat Biobase BiocParallel caTools CoreGx downloader magicaxis matrixStats RColorBrewer reshape2 S4Vectors scales SummarizedExperiment]; }; - RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.14.2"; sha256="1pfscnxjxpc2v8n5ly0505ncfml9ya288fccmx1jnaz3vmahycks"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors SummarizedExperiment]; }; - RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.10.0"; sha256="0cp9ly4334x3jvcmxz2yg4n7rp7n3immjsaq3mnzidf2acgpqbzl"; depends=[dnet igraph Matrix]; }; - RankProd = derive2 { name="RankProd"; version="3.16.0"; sha256="0fm81fgf1pk05g74qxi140bxxgrzqq9agi1nshazkc7wc3hbshl8"; depends=[gmp Rmpfr]; }; - RareVariantVis = derive2 { name="RareVariantVis"; version="2.18.0"; sha256="01yv365dby8lkg9a0ahmz3r6xhqf1ccs4nmch5y23f4hfzlqzgmi"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - Rariant = derive2 { name="Rariant"; version="1.25.0"; sha256="0bns37cg842lvlvb19lvgiylb6k7xas1war56rwkn32xc9scz46r"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; - RbcBook1 = derive2 { name="RbcBook1"; version="1.58.0"; sha256="08qaz12mjvmw2zabiisiw837409g1fjqiavyc4wckp5pc5qxi5k2"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.30.0"; sha256="0rgxqc3sbq7phnrn9a6z361725h4zi2mi985i43n7fi3csif7507"; depends=[]; }; - Rbowtie2 = derive2 { name="Rbowtie2"; version="1.12.0"; sha256="1pcdcqn82ray73bajjnx5zgs98m56acviq3adbzga0cfqf6wiqx5"; depends=[]; }; - Rcade = derive2 { name="Rcade"; version="1.32.0"; sha256="1r6x9jfyvrpa6cfax4gnxymmnv2swfzr8whfy8b3pq0bv69p97hm"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; - RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.30.0"; sha256="0vbl2nbyvm41jqf7lzv9x76yyjf0qpgia67csrf6xr9dcb8j2499"; depends=[graph Rgraphviz sfsmisc]; }; - RcisTarget = derive2 { name="RcisTarget"; version="1.10.0"; sha256="0a711jzxl1kggpk3ln68xzc5y30my4nbs1mxx8951pyi3jvzjfyf"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; - Rcpi = derive2 { name="Rcpi"; version="1.26.0"; sha256="19nnkypcz7hfyas5l0lykm45a6d41pbhpi1q6v1hzh0mmdsa9vki"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; - Rcwl = derive2 { name="Rcwl"; version="1.6.0"; sha256="08rzp0x3na5g7s9mw9paj869ppgz9ckmq1rzhqww394kdaw3b4a5"; depends=[batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; }; - RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.6.2"; sha256="0mj2s5084jjxiipwrpfr3cld47m2p5sknbbpmqk49r0ybwv0k2rb"; depends=[BiocFileCache rappdirs Rcwl]; }; - Rdisop = derive2 { name="Rdisop"; version="1.50.0"; sha256="1nccrjk8l3lg8jqagnfnsypk190hxcwy8pv5m1wlfl5hjjia05x9"; depends=[Rcpp]; }; - ReQON = derive2 { name="ReQON"; version="1.36.0"; sha256="1yz0r0rrk4n6dnqbdq41lvs5z8l6vkx729m0a7f29svw4dbc6mdq"; depends=[rJava Rsamtools seqbias]; }; - ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.4.2"; sha256="1gjvgs8a2bb1g356qi2fv9ynxm61j67542cfn6yg8c2fgwpfxk61"; depends=[ggplot2 gplots httr jsonlite progress RColorBrewer]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.34.0"; sha256="04b2ng9jp2bsfbg3wnbg6m6a5c3szcmbypk1lx34i63228g8z98m"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.36.0"; sha256="1xpcngb8bpabah7flm3bcg37lsw9qdad9a5994nw2b6hyhylxv2n"; depends=[Biobase]; }; - RedeR = derive2 { name="RedeR"; version="1.38.0"; sha256="1v51alvya580d77cqy403x3wysg6yip4crpnna35jdyhmwijajcm"; depends=[igraph]; }; - RefPlus = derive2 { name="RefPlus"; version="1.60.0"; sha256="07vv7r0aahmbs5c596g8qnvka8lydziwdpv99fajys92vvljnf85"; depends=[affy affyPLM Biobase preprocessCore]; }; - RegEnrich = derive2 { name="RegEnrich"; version="1.0.1"; sha256="1ajzqfwi6gcv409a5sakfvc2c2w618d91bfxalrwhxq3scbri7jc"; depends=[BiocParallel BiocSet DESeq2 DOSE dplyr fgsea ggplot2 limma magrittr randomForest reshape2 S4Vectors SummarizedExperiment tibble WGCNA]; }; - RepViz = derive2 { name="RepViz"; version="1.6.0"; sha256="1ias47j7k4r67nn5cljx32fg80917azqa8xgn3gkilq2fxnz73qf"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; }; - Repitools = derive2 { name="Repitools"; version="1.36.0"; sha256="1il21djzcw9zyfv3vn1n9nb91xvjla8s18l99w9d9h4jmkj6s5p6"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; - ReportingTools = derive2 { name="ReportingTools"; version="2.30.2"; sha256="1vvra7l29s7lnq996nwlpzbkrbdkr3ivkgmfp4kndfykxsl9q4vb"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; - ResidualMatrix = derive2 { name="ResidualMatrix"; version="1.0.0"; sha256="1njzyrmfqw9nz1f8z496kysx5kfi3b10b29jj9vqx3xlk935fg71"; depends=[DelayedArray Matrix S4Vectors]; }; - Rfastp = derive2 { name="Rfastp"; version="1.0.0"; sha256="19g8di5ddsp8kx1v5ai0rb2i6irf38c14x8pn966xgmivy6zxfbx"; depends=[ggplot2 Rcpp reshape2 Rhtslib rjson zlibbioc]; }; - Rgin = derive2 { name="Rgin"; version="1.10.0"; sha256="1g55fgskkxyqq5w3i51n10a3812pv4xlasi5ylacjva5h7k2blnv"; depends=[RcppEigen]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.34.0"; sha256="1k0nrskak2v5xv7za226r3wypja3zxxmmc0cxz2imjhlgnkbha77"; depends=[graph]; }; - Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.12.1"; sha256="14fnq4gijxp2l7985pksfk52i6klvy81r3892lnna73c6hh1dj28"; depends=[]; }; - Rhisat2 = derive2 { name="Rhisat2"; version="1.6.0"; sha256="0f9x2qcazml0zjcgyy0kdphnww4d1m62rn0ijcqlhy1bng6ihwwb"; depends=[GenomicFeatures GenomicRanges SGSeq]; }; - Rhtslib = derive2 { name="Rhtslib"; version="1.22.0"; sha256="18wag2jnpda6078xjkpfdvar1gkb2myhw83gg03l39sabh35qya4"; depends=[zlibbioc]; }; - RiboProfiling = derive2 { name="RiboProfiling"; version="1.20.0"; sha256="112071w7aw7cwckipq0dll1lssl7pwafma4v9jj9sx12rjcj57xg"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; - Ringo = derive2 { name="Ringo"; version="1.54.0"; sha256="1603bjjn2gfqs32j7h4kmxp3jfkfy57bxdpfh6b9jrl47dlyjp46"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.32.0"; sha256="1wyidjrhrj1f1z4y4cik3p0qxm000w27hsyi768ql31ygddm0j0b"; depends=[affy Biobase biocViews Rcpp xcms]; }; - Rmagpie = derive2 { name="Rmagpie"; version="1.46.0"; sha256="11pl8kwpzk9b1wnipph8cpwz4wi1bf66yi62hvnyfi74ldyjqli9"; depends=[Biobase e1071 kernlab pamr]; }; - RmiR = derive2 { name="RmiR"; version="1.46.0"; sha256="0g8i7qzvkinq6r9lhv41k2mpan8yvv7x7fxxg8mkjdw1k12rsl6g"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; - Rmmquant = derive2 { name="Rmmquant"; version="1.8.1"; sha256="1sfm9qazwgmcf9qga6g182nq0g94l0ajihrypqsmzq90al1sx5dv"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - RnBeads = derive2 { name="RnBeads"; version="2.8.1"; sha256="0f6j5x8w3j3fckaq5270gb8fwqd51qpf58n9qch8kh35l49rqi9h"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; - RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="2.0.0"; sha256="19h4vz25wcvp428vygn2cw1abwbjqxac8vy6l0y8lld5p9f91hh0"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; - Rnits = derive2 { name="Rnits"; version="1.24.0"; sha256="0nkafam4glwv4makj47b25f6vr693pz891lbbam8z73j0ddqi3ai"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; - RpsiXML = derive2 { name="RpsiXML"; version="2.32.0"; sha256="1ps9xp1bvq5iml09arw27pa6chgm39hhc94pdb54z0c04gz2mzln"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.24.0"; sha256="083c3ql0gndb6y7m9d3rpbkimyw8cj8jyv77mwwjhq49lzwsg6n9"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="2.6.0"; sha256="040pggkwglc6wy90qnc7xcdnaj0v3iqlykvvsl74241409qly554"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="2.4.3"; sha256="0c4akc89p5467n5rzq9bi7h0h15rbpqpvh7fw42qcj7g2vc41wba"; depends=[Matrix]; }; - Rtpca = derive2 { name="Rtpca"; version="1.0.0"; sha256="0cmibk1d62xzipxxp10xsb499v633mplv0ikacgfsfsl1pjdpk5g"; depends=[Biobase dplyr fdrtool ggplot2 pROC tibble tidyr]; }; - Rtreemix = derive2 { name="Rtreemix"; version="1.52.0"; sha256="00hdk91mkprsm7zfnq3bmsqldr6mjcbj08s8jis3wc475yqs6mir"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.28.1"; sha256="0fhf4lsfxrim7glazh6ng46ykzaly5ggwpg170vcz4cc24prv0rh"; depends=[BiocGenerics]; }; - SAGx = derive2 { name="SAGx"; version="1.64.0"; sha256="1455nm0sbhyn36k8zg93ak204hqa2f95in7ximfayz6b2h4p0zka"; depends=[Biobase multtest]; }; - SAIGEgds = derive2 { name="SAIGEgds"; version="1.4.2"; sha256="0wr9dvrqgpryca7cvnn6ghb54hc3bnhq0b5vrmx80lvy5q3f28qj"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; }; - SBGNview = derive2 { name="SBGNview"; version="1.4.1"; sha256="0xy3r1v9l2bjzk44ylvqa70xqzpdpxgvjq5bz72hfxz6lf31aqkz"; depends=[AnnotationDbi bookdown httr igraph KEGGREST knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; }; - SBMLR = derive2 { name="SBMLR"; version="1.86.0"; sha256="1bjcq6zfbm26wp07ygq45py363bfgly1258g5any0hr2ipaqkf3x"; depends=[deSolve XML]; }; - SC3 = derive2 { name="SC3"; version="1.18.0"; sha256="1pz43jkqqyk64rm6j0rcww0xggr2dsmnbg5jc2mg72zskgcgygp7"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; - SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.32.0"; sha256="1wmj2dfsnclv9a8nsinaadjc5l7p5b2n2bfshhmlqigmf67iqg1n"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SCANVIS = derive2 { name="SCANVIS"; version="1.4.0"; sha256="1fnkqxcc3cwd19k59phsw5q5wlsq601fisnwsw6nxnvhdbwbis1m"; depends=[IRanges plotrix RCurl rtracklayer]; }; - SCATE = derive2 { name="SCATE"; version="1.0.0"; sha256="0n17n7v1pyhbqniwzs2w9indw95qpccx6n452z7x9ikp3nivam8j"; depends=[GenomicAlignments GenomicRanges mclust preprocessCore Rtsne SCATEData splines2 xgboost]; }; - SCBN = derive2 { name="SCBN"; version="1.8.0"; sha256="1qnn3gsls5iyrjs4iinj4z68mlqf54mjyn12vvrhpqyfwdxjvwr9"; depends=[]; }; - SCFA = derive2 { name="SCFA"; version="1.0.0"; sha256="05f29gidi9mbhis6aaghgk77a46a7rzrq7kg9ag8qlm528rh8yr3"; depends=[BiocParallel cluster clusterCrit glmnet igraph keras Matrix matrixStats psych RhpcBLASctl survival tensorflow]; }; - SCOPE = derive2 { name="SCOPE"; version="1.2.0"; sha256="15lhgxmwl3v1r8dz9shlqljanb902fm3a0ap9a7mxbd10kmlk0n2"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; }; - SCnorm = derive2 { name="SCnorm"; version="1.12.1"; sha256="1f4b25n1dd1qfxc5mcvga1fbziw121l1kh9nzp3hxwbww3k2wihp"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; - SDAMS = derive2 { name="SDAMS"; version="1.10.0"; sha256="03dxkpm531q0pw4jsda60zlzlpfqy5rsi3j68qixqlg95l3fzgqz"; depends=[qvalue SummarizedExperiment trust]; }; - SELEX = derive2 { name="SELEX"; version="1.22.0"; sha256="02dk647r32as84la2lbv4hsqyan1h4khf8661xb0chlm9d9sr3gq"; depends=[Biostrings rJava]; }; - SEPIRA = derive2 { name="SEPIRA"; version="1.10.0"; sha256="1rn1yrvrgdr2dnxp3qhj98kx38ha9fz2abyi8rxqvllc9x9ibm5d"; depends=[corpcor limma]; }; - SEtools = derive2 { name="SEtools"; version="1.4.0"; sha256="16f5sx91m9pgr6h4wq2k9zw2qs45p77qfhwz4f0zdjw8g7abnl6g"; depends=[BiocParallel circlize ComplexHeatmap data_table edgeR openxlsx pheatmap randomcoloR S4Vectors seriation SummarizedExperiment]; }; - SGSeq = derive2 { name="SGSeq"; version="1.24.0"; sha256="1nfhy5kgyz56b6pyxcq8kflqwnhl9nlffszwpqb5fdh5ibz8xbjx"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; - SIAMCAT = derive2 { name="SIAMCAT"; version="1.10.0"; sha256="0cyfnnz2ldr8pq9i49p8rpdfbpfns42sdcdvqdpc14696j7zmbsh"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC progress PRROC RColorBrewer scales stringr]; }; - SICtools = derive2 { name="SICtools"; version="1.20.0"; sha256="0sm4vqjpanf3qadmgxpnig816mp0lcirbbzs0nckzwnx0n2zqvp8"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; - SIM = derive2 { name="SIM"; version="1.60.0"; sha256="02q30195wk11d6bcnjdmhrgm1y79gbnh9mr8fywils3jvc8galfg"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.22.0"; sha256="02p20c1mqp2fwnf4jaaqdvflkm2lfggy7gl5hv9sj6jqbwn8140c"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMD = derive2 { name="SIMD"; version="1.8.0"; sha256="0zhycbkjis470qbin5s8cwc7fpj6w6qmgr3s5ixzabjxwyyf1vrg"; depends=[edgeR methylMnM statmod]; }; - SIMLR = derive2 { name="SIMLR"; version="1.16.0"; sha256="07cvzwa5k8skjs903jyglpjrvz83qb7b5r8qbw8dcnmj9j9g6rrk"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; - SISPA = derive2 { name="SISPA"; version="1.20.0"; sha256="0sax3b59l81ahglmf0y1w066bil84nqxsiqb82daisi2lnqsifgz"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; - SLGI = derive2 { name="SLGI"; version="1.50.0"; sha256="0lvxvfq41d1bfhr88val3p544987hymz6b2mbd1xryiryjclvh1a"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; - SLqPCR = derive2 { name="SLqPCR"; version="1.56.0"; sha256="0hr05f3jn44f542mk5m5gpkxjw2xvcbvggc7jzyijgil54yhk8xz"; depends=[]; }; - SMAD = derive2 { name="SMAD"; version="1.6.0"; sha256="00ffpb7n3151ghfblgkl670hbng51yxsifbwyp6j84cmvn5137p2"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; }; - SMAP = derive2 { name="SMAP"; version="1.54.0"; sha256="1flhy0is8jr3spq66z634wrkidpld5h5ick3c395nc2m2w97i0vh"; depends=[]; }; - SMITE = derive2 { name="SMITE"; version="1.18.0"; sha256="1my2w1y4h2kq26h2cjzhi651g522ziwc742dd9a5z0ljjrpgpcpn"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; - SNAGEE = derive2 { name="SNAGEE"; version="1.30.0"; sha256="15hj3jvyx26rz7pj0lsxc8452bz1z5xjqmfw7igmjgfa8y1gd61m"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.24.0"; sha256="1rylg81633zwhafkzg4rc0dcx0wqhcvpgk5mj5kvlwwmjvy4csiv"; depends=[gdsfmt]; }; - SNPediaR = derive2 { name="SNPediaR"; version="1.16.0"; sha256="08zlqzrd9kan6kkamfhzkn39nvybddb2mv42sv6gg9yxhxw8gbpg"; depends=[jsonlite RCurl]; }; - SNPhood = derive2 { name="SNPhood"; version="1.20.0"; sha256="12xm7i8p42qbnx40p87ihqky24i1gf7df9sdw3aj47w0a2mkiz1i"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - SPEM = derive2 { name="SPEM"; version="1.30.0"; sha256="15wb6pgan6ilkz1yxm40hinjn5zqyf1iqdhj8f0s2cm64yggk58p"; depends=[Biobase Rsolnp]; }; - SPIA = derive2 { name="SPIA"; version="2.42.0"; sha256="0cp80yi368g38g101glxl2j5yfpxx4k44px7zdsssh1mcmxa62dj"; depends=[KEGGgraph]; }; - SPLINTER = derive2 { name="SPLINTER"; version="1.16.0"; sha256="04z80mwjgfgnb9c4xq09ygsw2s8h2x59k8gvvirl6j6swligam0m"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; - SPONGE = derive2 { name="SPONGE"; version="1.12.0"; sha256="12zvhwpm6f2x0wn84fgy39ks35jfcbqjr8bzb0c6i8dn2khy286i"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; - SPsimSeq = derive2 { name="SPsimSeq"; version="1.0.0"; sha256="1z2mz9h9mvr7q9bmfh19hm6zajah08i2mnr2c59c255f4iyx6ysb"; depends=[edgeR fitdistrplus Hmisc limma mvtnorm phyloseq SingleCellExperiment WGCNA]; }; - SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.4.2"; sha256="1115a2xfj72g2pwa5gd5s8fklkk14igavkfn6xzagybf7vs2h2ck"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; }; - SQUADD = derive2 { name="SQUADD"; version="1.40.0"; sha256="0kan5979hfc3044daqj9basjs6chvmrsm8llfaf4mlwbqdfmrz44"; depends=[RColorBrewer]; }; - SRAdb = derive2 { name="SRAdb"; version="1.52.0"; sha256="1lmkb9wdp77h6bjy1bvjcfpzsm8bzmixq63fanrlyyqngxm553qg"; depends=[GEOquery graph RCurl RSQLite]; }; - SRGnet = derive2 { name="SRGnet"; version="1.16.0"; sha256="09a1vnj9v0sqnz2bsmlmvx6ahs3q3rnhq25wqfbzli1n0lcxk5i3"; depends=[EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; - SSPA = derive2 { name="SSPA"; version="2.30.0"; sha256="1lszpy4pwy4ndx0l400n03gk90vdfk1dbawcpn53wsc1chw4ham8"; depends=[lattice limma qvalue]; }; - STAN = derive2 { name="STAN"; version="2.18.0"; sha256="1zxw6wi5v6pdzmbziidq589p1dz6klvcmglqqndnh2lwns7ggvf9"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; - STATegRa = derive2 { name="STATegRa"; version="1.26.0"; sha256="1df2wl6gnsrh5xazr5d5mncdp3ncvq4fjj4xv3scrjnwcrpw2ny6"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; - STRINGdb = derive2 { name="STRINGdb"; version="2.2.2"; sha256="0dr3b7pk7q4pl89ndahgnk3bv2xf2vxm2yjp7sfll6ml93xh2rp4"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - STROMA4 = derive2 { name="STROMA4"; version="1.14.0"; sha256="0wvnqahydvpkplaajskalz2b6qgv1yfxbklv9j126msrhs40ni1m"; depends=[Biobase BiocParallel cluster matrixStats]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.20.1"; sha256="0jhq5g8a59g6s2yzs7sfq5pxz2r7a9wdgrp9lxch7pk18wyvzn8i"; depends=[biomaRt data_table ggplot2 reshape2]; }; - SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.44.0"; sha256="1xnhx1biw95c66pahj84mdj2lnshm8hlr953ljd9xzhjk1wam4k1"; depends=[]; }; - ScISI = derive2 { name="ScISI"; version="1.62.0"; sha256="0vp4zkgjd35lxvjy3bl938saqnc67k23p7xxfw85nzhd38f9fy49"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; - Scale4C = derive2 { name="Scale4C"; version="1.12.0"; sha256="0kk8nwd8png06g641cjlkbr5ykl7dn9drfyxdvhc1knbv48w2i42"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; - Sconify = derive2 { name="Sconify"; version="1.10.0"; sha256="0r5n7cyv483k17k9gv2vhfi14h6idnfx2y41rbnwvsplh05fc6mm"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; - SemDist = derive2 { name="SemDist"; version="1.24.0"; sha256="1kkicqqxmhsxzswxiqm8ccvvcly0rak5rxlfkc0b8rvgjc1p4zhp"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.30.0"; sha256="0h7aaqy00rq9vxpz2sfkl416gx74p8qnanf6z5946f2ra4xl2c72"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - SeqGSEA = derive2 { name="SeqGSEA"; version="1.30.0"; sha256="06ws19ilw1z84cz742rry99m1dp85qhyar47yxf0dsslwnbb2yk0"; depends=[Biobase biomaRt doParallel]; }; - SeqGate = derive2 { name="SeqGate"; version="1.0.1"; sha256="17g1pgwk1whcp9dm96ccw5c1sfjx4rgrjbzhr01cw09hzjvxjm7q"; depends=[BiocManager GenomicRanges S4Vectors SummarizedExperiment]; }; - SeqSQC = derive2 { name="SeqSQC"; version="1.12.0"; sha256="1rxm0pw13jkpn33w36b2jyka0sp4mwjzg5hixxzsmw4pjpfxih7c"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.28.1"; sha256="1mh0a9cnr3b7l06asf1g4a67zdi77fra7z231yw2qdaamxmnwsx6"; depends=[Biobase BiocGenerics data_table gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray]; }; - SharedObject = derive2 { name="SharedObject"; version="1.4.0"; sha256="1sx7k7d1vs3sqxcqhzy4rxnb5ci71z7346a34y66p6lsryc30f1d"; depends=[BH BiocGenerics Rcpp]; }; - ShortRead = derive2 { name="ShortRead"; version="1.48.0"; sha256="0w4m8d3h660mmr2ymp206r1n4aqssxmkv8yxkbr5y1swrahxzfk9"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rhtslib Rsamtools S4Vectors XVector zlibbioc]; }; - SigCheck = derive2 { name="SigCheck"; version="2.22.0"; sha256="1fdh97k9lhwq7d852jjwg9p9gzhk72spxynyljzhcw369j9yqc7d"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; - SigFuge = derive2 { name="SigFuge"; version="1.28.0"; sha256="1nqhx0bfqk2vj8agkw6mkcxv2by6cx1l7hh8cx057dkflclj2wy2"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; - SigsPack = derive2 { name="SigsPack"; version="1.4.0"; sha256="00f5bhm7aj08zvjq19yyii9hsdlzcf9drndgry7gdqsw6m8538dv"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; }; - SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.28.0"; sha256="0hin5hzbbllkjxnnq04yi6n2m9dhgq9xg1bf2fm34j6sidhakca2"; depends=[Biobase limma mclust Ringo]; }; - SimFFPE = derive2 { name="SimFFPE"; version="1.2.0"; sha256="156472jp0kc78yh92id4894znisvndiiiibzm7vcxl7rd5fsmilg"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; }; - SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.12.0"; sha256="0wpgb2rhxxlclpmwl08iyfy204f7gpj8ijd0qdy4j41c58bl4qm2"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; - SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.2.0"; sha256="04rh8n8qx1xlsahgrb3fkd0vj1cyqmy3zi33l7dsz3m20q05qw79"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran SIMLR stringr]; }; - SingleR = derive2 { name="SingleR"; version="1.4.1"; sha256="1zr4gz1pxpwmwhvzb7cvlxf4mxn9qzymrfv345gbk24dzz5ah4bg"; depends=[beachmat BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors SummarizedExperiment]; }; - SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.26.0"; sha256="1pwf9ws0klcij27w22p0nh924yp5h2jsidp54ppp7mnx08iv0801"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.28.0"; sha256="0q701dx12avisspplpij6qs77bwn12xq589c1b9p4kyipqfh02qn"; depends=[iPAC]; }; - Spaniel = derive2 { name="Spaniel"; version="1.4.0"; sha256="0w4i6yjwivzcjcbxi5nmdli02wqglnfd9kmmf39pkhnngcw238a1"; depends=[dplyr ggplot2 jpeg magrittr S4Vectors scater Seurat shiny SingleCellExperiment SummarizedExperiment]; }; - SparseSignatures = derive2 { name="SparseSignatures"; version="2.0.0"; sha256="1zlrm8wlvwpn7cqd0mr14dfhw1pqml4zzgg7z63vajk73ybly1yy"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls reshape2]; }; - SpatialCPie = derive2 { name="SpatialCPie"; version="1.6.0"; sha256="16gjr7csvxgs893zlf3vsxmyxgnyrcfsp2a4zxhg56mya8ix4j8h"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; }; - SpatialDecon = derive2 { name="SpatialDecon"; version="1.0.0"; sha256="1lp1skfar6946r65aq7wmd086v9q2hm08ygkzq06s14kzcj35fxm"; depends=[logNormReg]; }; - SpatialExperiment = derive2 { name="SpatialExperiment"; version="1.0.0"; sha256="1qp8j56qa1hhdlipy3vkw9krairx0rz3v40asyyv1q38jy2lck6h"; depends=[S4Vectors SingleCellExperiment]; }; - SpeCond = derive2 { name="SpeCond"; version="1.44.0"; sha256="0hbvd0n9bcksgvqfzfj65ijhzr0jp6r5sc9rwavqrjd4g6fy7amj"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - Spectra = derive2 { name="Spectra"; version="1.0.5"; sha256="1qgz9lm0nkcl7ki73ckfvhf181dsmpri0k6ps4r6l26ddqvxyjdc"; depends=[BiocParallel fs IRanges MsCoreUtils ProtGenerics S4Vectors]; }; - SpectralTAD = derive2 { name="SpectralTAD"; version="1.6.0"; sha256="1jmkg9zv0lz6dwsgjqxrz412anjpqhlk0rcsxx5899w0giijvzl1"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; }; - SpidermiR = derive2 { name="SpidermiR"; version="1.20.0"; sha256="17z6i3ncsyznwzq8ayfbfsbl6n2f6rf8d99gch5scjxmvr42czhh"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra MAGeCKFlute miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; - SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.30.0"; sha256="0z7b0i2qna792zcx82xas7hwhc4fnbs986148s2bd4iiszghig45"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - StarBioTrek = derive2 { name="StarBioTrek"; version="1.16.0"; sha256="1rjnikkrah0avvc2wv8hlr6clgh7dqaxzsdzcc1bsif7fq22d46y"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; - Streamer = derive2 { name="Streamer"; version="1.36.0"; sha256="006rj51jrra6dscp3fh71f145ncays10zidqq4p2x39z786zzlrv"; depends=[BiocGenerics graph RBGL]; }; - Structstrings = derive2 { name="Structstrings"; version="1.6.1"; sha256="0x5s6m7im34sj59cy5xf6zdwswq42d3v71v4l2ik7qcl0c13fr0r"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; }; - StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.6.0"; sha256="0ff40703iyf5wk77hbqhphfxnzc2wcshnjhvh66c5l0jvj9z8xvc"; depends=[assertthat BiocGenerics Biostrings dplyr GenomicRanges rlang rtracklayer stringr VariantAnnotation]; }; - SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.6.0"; sha256="0h4ndjwvxg93xi0ihcngg1ahbc22k5qg15sazjrb1qg0x5hz9kr6"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; }; - SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.8.0"; sha256="1jqybq79kvlm1myywfsvp4kyg10ypqi9lhkghxi5hxvz86ii7pb2"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.20.0"; sha256="04x6d4mcsnvz6glkmf6k2cv3fs8zk03i9rvv0ahpl793n8l411ps"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.28.0"; sha256="0ksj4f9z14mjsv6ssg5dwhpldw4r7wpdsln2if5g486mm1c56r8p"; depends=[biomaRt zoo]; }; - SwathXtend = derive2 { name="SwathXtend"; version="2.12.0"; sha256="08zmks8nhzdf2xs1v2rdgdnlxk5izpjr0pf6nlnnqg1f9357x4py"; depends=[e1071 lattice openxlsx VennDiagram]; }; - SwimR = derive2 { name="SwimR"; version="1.28.0"; sha256="07z4hzwi622g25j4h7f1jl9110mlak9jyrllcwc7bq0j266f0x97"; depends=[gplots R2HTML signal]; }; - SynExtend = derive2 { name="SynExtend"; version="1.2.0"; sha256="16aanfn4gnkfa9vpgy8mh4xfxh7pq5vvvh258qk0xn7hr9qig219"; depends=[Biostrings DECIPHER igraph IRanges S4Vectors]; }; - SynMut = derive2 { name="SynMut"; version="1.6.0"; sha256="0a3xnsib179yf2pl49jb52dyl1rd9qdc6ymd1xvz5mz3jw3h62gp"; depends=[BiocGenerics Biostrings seqinr stringr]; }; - TADCompare = derive2 { name="TADCompare"; version="1.0.0"; sha256="1sl9yf6n7iwc5pskz05lychrvlcdbv2sw64sgcckdgip7vfymnk2"; depends=[cluster cowplot dplyr ggplot2 ggpubr HiCcompare magrittr Matrix PRIMME RColorBrewer reshape2 tidyr]; }; - TAPseq = derive2 { name="TAPseq"; version="1.2.0"; sha256="1v8whnfd1aiwlx1429n2afklfijp0vmvh245wmvjxcwbldd3awym"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; }; - TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.2.0"; sha256="02pcw4bwx0s4c5zvf0xydjg98ppq0lkz57nbqbhggp3p7cn4ngk4"; depends=[ASSIGN BiocParallel bioDist boot caret circlize ComplexHeatmap DESeq2 DT e1071 edgeR gdata ggfortify ggplot2 glmnet GSVA RColorBrewer readr reshape2 ROCit S4Vectors shiny singscore SummarizedExperiment]; }; - TCC = derive2 { name="TCC"; version="1.30.0"; sha256="0v7crvr9zirkbmvqh7nv8h2bgip99fx4h50hqfh9gbf6pwd3748c"; depends=[baySeq DESeq2 edgeR ROC]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.18.0"; sha256="1w1n8dsci0yqawxl5xayr383g81ilrskqldd40q1q2pc6gj1vw13"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment TCGAbiolinksGUI_data tibble tidyr XML xml2]; }; - TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.16.0"; sha256="1dfc6inf4lbsdg68p56xqdsr9wmfkh04zjg8r9d8379ajm181axx"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; - TCGAutils = derive2 { name="TCGAutils"; version="1.10.1"; sha256="0n5wzxf2jxc4pyg5v5jcispb7id86cmc4dpdvcsq23s49wd194yw"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; - TCseq = derive2 { name="TCseq"; version="1.14.0"; sha256="1v6pi5zrnl3fbyfrmf32g93mjx6q3y6lm2w1pfll610hdcbkyibn"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; - TDARACNE = derive2 { name="TDARACNE"; version="1.40.0"; sha256="1lpxxss0j87ylzz0hwvx8ipmphb9ny5mgqpr3393r8bhx2x30niy"; depends=[Biobase GenKern Rgraphviz]; }; - TEQC = derive2 { name="TEQC"; version="4.12.0"; sha256="0fzcdwqr0kzxs4qplcp76mijfq1q7hj47dfxygs29jwigwxwlq8q"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; - TFARM = derive2 { name="TFARM"; version="1.12.0"; sha256="0wx1kdq2xfgd5sxs1jq964c7n3kd33yzm8b2pjic8kawc7i6y00d"; depends=[arules fields GenomicRanges gplots stringr]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.28.0"; sha256="0p42hnwhipmcvrsqk3s8qfiian1fvh6izfd9m961bsx99r2clnha"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.10.0"; sha256="1ln3c323gq90rq68nh42nlrj834gxv5rcv1mdl9r2mnlpiwj3npc"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; }; - TFHAZ = derive2 { name="TFHAZ"; version="1.12.0"; sha256="13h13b8k8hgfacfhwvf7q20mzdz9vp4v3jkz3m0c67s8c4k9nz2x"; depends=[GenomicRanges IRanges S4Vectors]; }; - TFutils = derive2 { name="TFutils"; version="1.10.1"; sha256="04bmm82yllrqnc01k7s6a4m2bdjrddvvz9r9w5x12fnznlmj6jw4"; depends=[BiocFileCache dplyr DT GSEABase httr magrittr miniUI readxl rjson Rsamtools shiny]; }; - TIN = derive2 { name="TIN"; version="1.22.0"; sha256="0sf0824crbzksr3cky09kvyiffsvv2arinw09pvhfj2qli6rsfda"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; - TMixClust = derive2 { name="TMixClust"; version="1.12.0"; sha256="0rajcylmpc360fy15xxw2820jcnmj8vsi0ca652d6ja9sn5ymy90"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; - TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.6.0"; sha256="18vnrwr0fgavx5rv24l13jyqqlyv50w7qvkvajq12lbmcx7vrwrc"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; }; - TOAST = derive2 { name="TOAST"; version="1.4.0"; sha256="1pgjkfy3x3k1v476113cq0ajlv8ani0jyh6mdng6vdmg860sxlax"; depends=[corpcor EpiDISH limma nnls RefFreeEWAS SummarizedExperiment]; }; - TPP = derive2 { name="TPP"; version="3.18.0"; sha256="0mgfb2x0k00h50iqcjjglmxfs5jpl7d527g2pp9fmc0vh9zlm7ac"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; }; - TPP2D = derive2 { name="TPP2D"; version="1.6.0"; sha256="1qzwxfk2b1mp24yqp9mg5mrj176rbhyvb2s6vq38bxh0ymfprhl9"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; }; - TRONCO = derive2 { name="TRONCO"; version="2.22.0"; sha256="0i9zvmlp7v4fyh2hp3ydviharw3mxcs4sllp4m1r9glfa3hvdlf2"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; - TSCAN = derive2 { name="TSCAN"; version="1.28.0"; sha256="0cxyf34prx02rlh05wyvbvwwm8m73glnshf1b3a9g0rzn8wv4kks"; depends=[combinat DelayedArray fastICA ggplot2 gplots igraph Matrix mclust mgcv plyr S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; - TSRchitect = derive2 { name="TSRchitect"; version="1.16.0"; sha256="1s09isqaph4i60hazc0b1irf9q8x3v2640zwc4gpdn3qlind7gra"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - TTMap = derive2 { name="TTMap"; version="1.12.0"; sha256="1dncj4qcl9qqczg79644rq2mw5z2a2xvzbyjizlimanw5abxjsy6"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; - TVTB = derive2 { name="TVTB"; version="1.16.0"; sha256="0234axp2abbb3l5q62cbzvnrsp1i06x56z20ram6x8kg9kwpihwn"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.20.0"; sha256="1v24bswfx4mklz4xzlp3d2lkrq25fkj4qfg6g0da3i02ab77pq8b"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; - TargetScore = derive2 { name="TargetScore"; version="1.28.0"; sha256="14sa8hs9jics20pbksh1kk0r553ljz5x1ygap6c8gcqx9rmwi56j"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.46.3"; sha256="01qg7a8c8hrh41pgq5rwww5dik2191spm24s9w28xsjvp0vrqs7d"; depends=[assertthat ncdf4]; }; - TileDBArray = derive2 { name="TileDBArray"; version="1.0.0"; sha256="0rlzi2dh91nkr5rks22dkpcp8kv7kra25hlf4gkg6brzvjgnqrh8"; depends=[DelayedArray Rcpp S4Vectors tiledb]; }; - TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.8.0"; sha256="1jx0rk660mfzk7rfhamnp0disx3bv456cqi9hyaz2wcbcdrlvcjn"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; - TimiRGeN = derive2 { name="TimiRGeN"; version="1.0.6"; sha256="0id1c7z37zxrp1i4xamlys63vh1wzya1dyi7lxigcggrsvvfyyi6"; depends=[biomaRt clusterProfiler dplyr FreqProf ggdendro gghighlight ggplot2 gplots gtools igraph Mfuzz MultiAssayExperiment RCy3 readxl reshape2 rWikiPathways scales stringr tidyr]; }; - TissueEnrich = derive2 { name="TissueEnrich"; version="1.10.1"; sha256="1jgyhfv2qwlk7kvpp8nr1bpsadbqa88kkpdh9y96n46a276bxxzv"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.28.0"; sha256="1fpqxl3y4cz23qs10m900dvi3zyy6h7dp08rhhxgf13znjvbn6br"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; }; - TnT = derive2 { name="TnT"; version="1.12.0"; sha256="115gkmxlidhpqv97vli3bf25jq2s68lsv3zmzjrd50dfq4npchkn"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; - ToPASeq = derive2 { name="ToPASeq"; version="1.24.0"; sha256="1viv56hzhrgl4w14ysdd3av8xknqsg2wrlcpxr4v9maaragn7z8g"; depends=[Biobase corpcor graph graphite gRbase limma RBGL Rcpp SummarizedExperiment]; }; - ToxicoGx = derive2 { name="ToxicoGx"; version="1.0.1"; sha256="0ysmkwrpdv9swnfm9np9kv7haqv22fgi9s5nfar6c52bxcwxaj1s"; depends=[assertthat Biobase BiocParallel caTools CoreGx data_table downloader dplyr ggplot2 limma magrittr reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; }; - TransView = derive2 { name="TransView"; version="1.34.0"; sha256="1kwcgrw3x5kz8sk2mybl6ps9z7mnl14din43xj7g1c55yy5rl1pm"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; }; - TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.2.0"; sha256="1jjc3jb6vmd40syr64bwd3rbs0kn3l2n1vdy9sk0liypv7rzc52n"; depends=[ape igraph RedeR]; }; - TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="1.6.2"; sha256="0n784s2yflljx0rwmb90cqqj9dwjjgca34hrhjnrijidgiy6gfik"; depends=[ape BiocGenerics dplyr rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; - Trendy = derive2 { name="Trendy"; version="1.12.0"; sha256="0pyhc4sblxybc6lj58iwl5zcg9scwsrcily8ky32n53j5flgmi7n"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; - TurboNorm = derive2 { name="TurboNorm"; version="1.38.0"; sha256="02mbm2cmpjy9w8sdnw6f2jbrhccfqa8r4d27jcspilccsqmh58a0"; depends=[affy convert lattice limma marray]; }; - TxRegInfra = derive2 { name="TxRegInfra"; version="1.10.0"; sha256="1qrzm3kqijvig96m1bcndy0hm0ph4cn7p4vhbjqrl8sqyrzazryd"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; - TypeInfo = derive2 { name="TypeInfo"; version="1.56.0"; sha256="03npdqh3ls8j16yi5vba9bqwhxwv6v88pzl1slfra9jkv02nb262"; depends=[]; }; - UMI4Cats = derive2 { name="UMI4Cats"; version="1.0.1"; sha256="0qsmraxxpd3x4imm3pdpm3rlwqkybpnh2kdpmpfk0vp4nli9n5pl"; depends=[annotate BiocFileCache Biostrings BSgenome cowplot DESeq2 dplyr fda GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magick magrittr org_Hs_eg_db R_utils rappdirs Rbowtie2 RColorBrewer regioneR reshape2 rlang Rsamtools S4Vectors scales ShortRead stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene zoo]; }; - UNDO = derive2 { name="UNDO"; version="1.32.0"; sha256="0ybpz8xrymlf3hv17aigvaxhijwgvhikpzh2bbvcnvqxcc6fhc78"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - Ularcirc = derive2 { name="Ularcirc"; version="1.8.0"; sha256="132my2aacrfm2pv3gh3ny421rx7rnpfnr9mnh6y32y7j1i63qv8f"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr S4Vectors shiny shinydashboard shinyFiles shinyjs Sushi yaml]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.30.0"; sha256="043biy3ycqbjgf75sldky3nagayqzin3v5c0cbpp4bm52ydlxmg9"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; - Uniquorn = derive2 { name="Uniquorn"; version="2.10.0"; sha256="1j8fx3jdac314wyzxz22biwl0hw4mi6flcmswwgd0ylw3kh9spzb"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; - VCFArray = derive2 { name="VCFArray"; version="1.6.0"; sha256="14y80fg7sgbcw09z5n9lj8p6dprs26dn2cvdfkzdrv14ilbw49ia"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - VERSO = derive2 { name="VERSO"; version="1.0.0"; sha256="02xklj9xs978hjiwjb0cbs8fil694i7rb5gx2rqnchb0n1c24axp"; depends=[ape Rfast]; }; - VaSP = derive2 { name="VaSP"; version="1.2.5"; sha256="1bbsg9l0j5gqgf1gglky0zg3v26s6hfy49fabijqyj57sqfwda89"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; - VanillaICE = derive2 { name="VanillaICE"; version="1.52.0"; sha256="08xyffbm11742ghgkps5pz43js49jl9k4mj0x2g4sjfqfaajf8s6"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.36.0"; sha256="1sl0l6v05lfglj281nszma0h5k234md7rn2pdah8vs2d4iq3kimw"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges MatrixGenerics Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantExperiment = derive2 { name="VariantExperiment"; version="1.4.2"; sha256="0sac20wzj8clva2ynqv519ycgk9aq2gbyi5hv8jpzg99a5v9ji41"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.26.0"; sha256="0zy53knvyk8wy3hmnsxc0w9qkhvx6xhviskvx7rwmrsi7pz531l5"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; - VariantTools = derive2 { name="VariantTools"; version="1.32.0"; sha256="1im4g9p419mikkh4v585yf5f23d13chy67znk4g2mii2i1cd1c89"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - VegaMC = derive2 { name="VegaMC"; version="3.28.0"; sha256="19fhm5xiw4g5713zfxd7r38xnjwps2zld57iq2rb2icahs2hlxjv"; depends=[Biobase biomaRt genoset]; }; - VennDetail = derive2 { name="VennDetail"; version="1.6.0"; sha256="0z5ab7d5gmgnl37nwdqcqhy1dwh4wh7z0cgx0kfhm14nb86p48hz"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; }; - ViSEAGO = derive2 { name="ViSEAGO"; version="1.4.0"; sha256="0m1z42zajq33nvnyclimk5v48yyd89v8cghdy4l66xgnjhkkrc29"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut fgsea ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly processx R_utils RColorBrewer scales topGO UpSetR]; }; - VplotR = derive2 { name="VplotR"; version="1.0.0"; sha256="0f3lgwhm2shpf1w99nwcxn7h2j6ghjvjkwsbnn58bs946kc4cbmi"; depends=[cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr RColorBrewer reshape2 Rsamtools S4Vectors zoo]; }; - Wrench = derive2 { name="Wrench"; version="1.8.0"; sha256="01z7rd9fn6cpab3dxgwfpfjlq6vsqb8jhbzvhcqn9v2vqc2pridx"; depends=[limma locfit matrixStats]; }; - XBSeq = derive2 { name="XBSeq"; version="1.22.0"; sha256="1dvk2jpsdynqw5071z54yd5j0ddprhc1ppk834cz9liibd72d7vz"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; - XCIR = derive2 { name="XCIR"; version="1.4.0"; sha256="0c9nfc9z398sqfwzn911jh036jkx2slwyp61wn4lbffz27a8szkp"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; }; - XDE = derive2 { name="XDE"; version="2.36.0"; sha256="1705lq97w9brwd5ilc5gr1frgh5438pxd767n770cdxkz69xlqjb"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools mvtnorm RColorBrewer siggenes]; }; - XINA = derive2 { name="XINA"; version="1.8.0"; sha256="0z12wrbxxs0kxqy3mwkmxr7kjkmbpxjnai2x46hswfvwaxrds10a"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; - XVector = derive2 { name="XVector"; version="0.30.0"; sha256="1pqljikg4f6jb7wgm5537zwgq5b013nyz1agjrwfq2cljb0ym6lq"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; - Xeva = derive2 { name="Xeva"; version="1.6.0"; sha256="0ijgmgvv7348h2x773yfrrmnxl6lfc62n52pq33zykdcn0jgbxbs"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; }; - YAPSA = derive2 { name="YAPSA"; version="1.16.0"; sha256="1vwccrp01p8i42axbaz1bqq173la18ldrzmrjawr5nkjjkvddbpb"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST limSolve magrittr PMCMR pracma reshape2 SomaticSignatures VariantAnnotation]; }; - a4 = derive2 { name="a4"; version="1.38.0"; sha256="12q09dhxjl7yrd5m2y7a03kv5614dp144ajmskp5q9x2gvz30f79"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; - a4Base = derive2 { name="a4Base"; version="1.38.0"; sha256="0bqagjmg3yjmdzxv4j7685jjhgb261pq60b5qkfffr1lfnz27lsp"; depends=[a4Core a4Preproc annaffy Biobase genefilter glmnet gplots limma mpm multtest]; }; - a4Classif = derive2 { name="a4Classif"; version="1.38.0"; sha256="03fln0x1am5fqhj4fpkx1yq58paqha086bhhr8az8j0vsq1r7wcz"; depends=[a4Core a4Preproc Biobase glmnet pamr ROCR varSelRF]; }; - a4Core = derive2 { name="a4Core"; version="1.38.0"; sha256="13mzhn92kqpbn58zmh96f6frkm85sv9137mldfzaljf6snk0spg2"; depends=[Biobase glmnet]; }; - a4Preproc = derive2 { name="a4Preproc"; version="1.38.0"; sha256="1j8jhal83x1xpmsaw8iwv2r32i1ghzm6n0ipjk06yqa9f6zb7f7i"; depends=[Biobase BiocGenerics]; }; - a4Reporting = derive2 { name="a4Reporting"; version="1.38.0"; sha256="1jx4ym3hyix8gwr8d2r38w1wj7siv6ynzhwanczcjf1naws3dqpy"; depends=[xtable]; }; - aCGH = derive2 { name="aCGH"; version="1.68.0"; sha256="17i8p3nlfr1vc33lq5xd93qjkzinahldl87bnahvhadzgmc9xkrk"; depends=[Biobase cluster multtest survival]; }; - abseqR = derive2 { name="abseqR"; version="1.8.0"; sha256="0lh7kcsp3yb3s8s8j6w9k1by8i16q7r2a49z8y1xjmkcb2klsi3f"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; - acde = derive2 { name="acde"; version="1.20.0"; sha256="0iixhcxgf2dwwmxqd78cnlyx2f8gql2a49hw2c1j86k65lvj4rhq"; depends=[boot]; }; - adSplit = derive2 { name="adSplit"; version="1.60.0"; sha256="1dqxcbwylr8g1sl0pbca7vkgz85la8s4lrxss1pv9y9spyjccz49"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - adductomicsR = derive2 { name="adductomicsR"; version="1.6.0"; sha256="02rwda9w5rkv6fvba932nwv1gd6vil6qpbny38dhlazinpr7hyzl"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; }; - affxparser = derive2 { name="affxparser"; version="1.62.0"; sha256="13h4iwskvgwgxid9f60gzb1zndgbhdlbn9ixv5waihy1jkcbn24p"; depends=[]; }; - affy = derive2 { name="affy"; version="1.68.0"; sha256="0ywz548cbzk2k1njnxhlk5ydzvz2dk78ka8kx53gwrmdc4sc2b06"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; - affyContam = derive2 { name="affyContam"; version="1.48.0"; sha256="0pi5fll5868sb80vb9kbymz6gkjv58f0abk6zwn407cnyjhr342b"; depends=[affy affydata Biobase]; }; - affyILM = derive2 { name="affyILM"; version="1.42.0"; sha256="0qaag3svfz925p7p9byiblsxdvs1k2a4ipjvv5pwnf6fk94kn6gf"; depends=[affxparser affy Biobase gcrma]; }; - affyPLM = derive2 { name="affyPLM"; version="1.66.0"; sha256="0bkmyd5pkvgjgwppsyh9bwxx8nld93ijzic47lsjgy7gl1cniyg7"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; - affyPara = derive2 { name="affyPara"; version="1.50.0"; sha256="058s7vy6klkppzaymin1q5n6kw33ayl5n00q3pdr2is8ahmhq103"; depends=[affy affyio aplpack snow vsn]; }; - affyQCReport = derive2 { name="affyQCReport"; version="1.68.0"; sha256="073j54dw3ag0lgmkj1gp3lifl79inq2d95bg6jgsblwcfx26vb2m"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; - affycomp = derive2 { name="affycomp"; version="1.66.0"; sha256="106gz4rami04r0ffc7rxkrv92s3yrcnlqnyykd5s8lrkndbihrpk"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.62.0"; sha256="0jacgwylg7wjw3xk3ga2sb1wkdklm5glamhbmqgvzm5kdjnl0rv0"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; - affyio = derive2 { name="affyio"; version="1.60.0"; sha256="14xnzrxrvgxgixjhq5a9fdgcmrxam2j74hwidkc9if92ffv6s83h"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.64.0"; sha256="1xc28s49w02k45ks8zhj7i28lcwdy4ihpgb9l4npzr1pblzg594j"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; - aggregateBioVar = derive2 { name="aggregateBioVar"; version="1.0.0"; sha256="1ggdpsw0prrg05n6sd5qrpfghlkzh27qdwr4wd3qmb990xz70j2x"; depends=[Matrix rlang S4Vectors SingleCellExperiment SummarizedExperiment tibble]; }; - agilp = derive2 { name="agilp"; version="3.22.0"; sha256="0g6i5m9dd8s8gv75fpcqngrsgkx0i9777v63fgp588430bm51n8z"; depends=[]; }; - alevinQC = derive2 { name="alevinQC"; version="1.6.1"; sha256="1gb7251fxhiyl2wljdydpc44iknhw8bb0k4gjzsrccnr1s3yyk5v"; depends=[cowplot dplyr DT GGally ggplot2 rjson rlang rmarkdown shiny shinydashboard tximport]; }; - alpine = derive2 { name="alpine"; version="1.16.0"; sha256="0wrnmmz878bchdwfss82z8fgzcsjbx8cpamfpdpzmx4bagp7yzp8"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; - alsace = derive2 { name="alsace"; version="1.26.0"; sha256="1jp8w71hvzvb8w0sx0n1v4bhw335bvqbicmrpn91sb85fvbrknzv"; depends=[ALS ptw]; }; - altcdfenvs = derive2 { name="altcdfenvs"; version="2.52.0"; sha256="1fmr8rpnr7xxr7kj0q36ypnydasacpwddxbrwhxix6xcy777f3k6"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; - amplican = derive2 { name="amplican"; version="1.12.0"; sha256="113abz4jyqx0zmfj1dpx9c7jpcgmvdwvrf7j9ihs0q57xw3s0l8k"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; }; - animalcules = derive2 { name="animalcules"; version="1.6.0"; sha256="1hpahzlh122y92ljg5fy42y4j744nj394b9gdwzwkzf4mpn0xbl2"; depends=[ape assertthat biomformat caret covr DESeq2 dplyr DT forcats ggplot2 glmnet lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC reactable rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; }; - annaffy = derive2 { name="annaffy"; version="1.62.0"; sha256="1szlr33lq98pd3kx6n9l07lhr93swbk6vjpvb2n9f7716k39mi4i"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; - annmap = derive2 { name="annmap"; version="1.32.0"; sha256="189gkq3rdazh1fbri4x7gbsbw572m2rc74qh49pps0la3qj90a9g"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.68.0"; sha256="1rql591x56532m8n4axdkfkhkbcsz5hfrf7271s0lmkvy84i7z6l"; depends=[AnnotationDbi Biobase BiocGenerics DBI httr XML xtable]; }; - annotationTools = derive2 { name="annotationTools"; version="1.64.0"; sha256="1q3c30hqxjgar3gm8d7h4rw3m7cgc11cgv9q0fwv5abj075cj224"; depends=[Biobase]; }; - annotatr = derive2 { name="annotatr"; version="1.16.0"; sha256="0dq67snpqxl9mifljm6zlnkdb0ghjwday0fvcn3i7zmrfszgzyf9"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; - anota = derive2 { name="anota"; version="1.38.0"; sha256="02s061q6dfw1czppqiklb0fz6q0mjyqgxg6926b2dpqpz8hv690x"; depends=[multtest qvalue]; }; - anota2seq = derive2 { name="anota2seq"; version="1.12.0"; sha256="1xajfkdrqhzdxh4nabyvb43zfms8kpxyj1sp3zhgs1jk1lvgx129"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; - antiProfiles = derive2 { name="antiProfiles"; version="1.30.0"; sha256="138pvbk7011i2pfi0p362pxa7bxd4456rqn2cy9d7889y7kcdyk9"; depends=[locfit matrixStats]; }; - apComplex = derive2 { name="apComplex"; version="2.56.0"; sha256="0mafxf2hwihskzx7b3mwz0dymsdlwf065hl7g2186d1nl8f4hs5q"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - apeglm = derive2 { name="apeglm"; version="1.12.0"; sha256="0pix1fhxk2q89p2745fgsmxwics9rf10l392qhw3rw6v6ynhims2"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; - appreci8R = derive2 { name="appreci8R"; version="1.8.0"; sha256="103z393i4my1ccnl9qnr0dhklly19qhwj7jmbjslnbvbxrxcaaf5"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; - aroma_light = derive2 { name="aroma.light"; version="3.20.0"; sha256="0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; - arrayMvout = derive2 { name="arrayMvout"; version="1.48.0"; sha256="14k7v4cmyj9drd4xy51wwapwy4yi9v490m63ahyiyr0cj93lm6vk"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; - arrayQuality = derive2 { name="arrayQuality"; version="1.68.0"; sha256="1qdl0a1qsc94509yr17a4rfsxqffy01gp18hfgh9zrdpzd1mlvm7"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.46.0"; sha256="1yrms160c3daswxi1k6chzvs6dagb74aqqqb4c6n4w6a02arsxc2"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; }; - artMS = derive2 { name="artMS"; version="1.8.3"; sha256="0h0fhgh564w89pkmdm5pwbh7mv83pirc4smhhl32az6m7x77b8yz"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; }; - atSNP = derive2 { name="atSNP"; version="1.6.1"; sha256="0gjvq9y03ix0nlj1fkj9qx8yr5qq9qigaldimizcr8mhavixwhzh"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 lifecycle motifStack rappdirs Rcpp testthat]; }; - attract = derive2 { name="attract"; version="1.42.0"; sha256="111m2hkqglw7f61pj5ih04wxlmr9a333c1s40ll0yx3yds4iqh24"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; - bacon = derive2 { name="bacon"; version="1.18.0"; sha256="0cv4zhs075mz8c5gdwhr45v14fb1lyi3rlwjfqyz15dmmnzlxw47"; depends=[BiocParallel ellipse ggplot2]; }; - ballgown = derive2 { name="ballgown"; version="2.22.0"; sha256="06kfaf7kba84qb646b4w4z7jyh7g9wf4jkgr3syn1zq6np6f0p57"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bambu = derive2 { name="bambu"; version="1.0.3"; sha256="025c22p29zb9asm42p53wyicdjv2k3k7ifiakkq65cxirc1w9q0j"; depends=[BiocGenerics BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges glmnet IRanges Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment]; }; - bamsignals = derive2 { name="bamsignals"; version="1.22.0"; sha256="0p3r9z9z5sfkd0b951cgr751k4z0yviyn1jfw9d4fcnyld7g1jxv"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - banocc = derive2 { name="banocc"; version="1.14.0"; sha256="12vh32hzgzdrkmm2afx81vwq35cv5l6lw31jzmf0vvyrrallj2g3"; depends=[coda mvtnorm rstan stringr]; }; - basecallQC = derive2 { name="basecallQC"; version="1.14.0"; sha256="18sjx2qkx3kpinsz63fv3xzgqcn9jd0imyn3akdriskky90caagc"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; - basilisk = derive2 { name="basilisk"; version="1.2.1"; sha256="1bwjs4v4va9dbp9y4p5f9p73d7207a3infl7ms1ppy3n984qrjk7"; depends=[basilisk_utils filelock reticulate]; }; - basilisk_utils = derive2 { name="basilisk.utils"; version="1.2.2"; sha256="1hvv6a05mvkgqw13nbnkmksw86jmq8kix7wacr8x6q64iva14qcq"; depends=[filelock rappdirs]; }; - batchelor = derive2 { name="batchelor"; version="1.6.3"; sha256="1vxmhq6a1yczdc5zx0b4k6rp286mzpch7g6nkf9bgiqpxsx8zswn"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp ResidualMatrix S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; }; - bayNorm = derive2 { name="bayNorm"; version="1.8.0"; sha256="0shrwd7fvbpqi27d8yn0ka3qq6qvyh0yc3xsrg4554pf80nlkkj3"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; - baySeq = derive2 { name="baySeq"; version="2.24.0"; sha256="1496inlw0x4mfy3g2v7j9ips96sf7576ydnfn6hvn2m6rz2ls215"; depends=[abind edgeR GenomicRanges]; }; - bcSeq = derive2 { name="bcSeq"; version="1.12.0"; sha256="1ivmcd24gzc0zvp2353ynil846f1b8qmwsypknfycvmsc3xfx65s"; depends=[Biostrings Matrix Rcpp]; }; - beachmat = derive2 { name="beachmat"; version="2.6.4"; sha256="0vbqdkc52j2v1ghygmhy2cbgqm4l99vmv8930wkzkq1pm73pmjji"; depends=[BiocGenerics DelayedArray Matrix]; }; - beadarray = derive2 { name="beadarray"; version="2.40.0"; sha256="178x7p4mn7jy8kvfvm6gwa3svxl7c813xw1xbrkxwnxbk8g0n1x7"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; }; - beadarraySNP = derive2 { name="beadarraySNP"; version="1.56.0"; sha256="00cm4464fw7ppzlni392ld6vqww80ji6zqychqhm8zxdw73f7y4w"; depends=[Biobase quantsmooth]; }; - bgx = derive2 { name="bgx"; version="1.56.0"; sha256="0gm4wv9drqvg9r4f0id1ivrfgv0nvh0hb6hp63b3jd14092777im"; depends=[affy Biobase gcrma Rcpp]; }; - bigPint = derive2 { name="bigPint"; version="1.6.0"; sha256="1axgapy4iyx059777m9faczwwj03h3i5dyrs0rlc84axzhzd2kis"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; }; - bigmelon = derive2 { name="bigmelon"; version="1.16.0"; sha256="0hj5njwx7n681vigkq4560f9dm7mdjgvcwbgp5nbdn1fb2z24bk7"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; - bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.38.0"; sha256="1k31h746j8r3f92vj62s38fw12qjkv5814ipcqfbswnxgaan17zj"; depends=[bigmemory]; }; - bioCancer = derive2 { name="bioCancer"; version="1.18.0"; sha256="0k13hh46b5rbhsnw3aaym2gpdj04xa9pw2g1c6sjxpskkyhw07ls"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; - bioDist = derive2 { name="bioDist"; version="1.62.0"; sha256="10p4iajpyqgqb35743jm1a33lwbsmax2g4vz9fbbhn2cpiq3chap"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.28.3"; sha256="03pdb76j7c28b1h1flb40ahq7i9iha22kblq6mkl3x4xmrdgaw5y"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.22.0"; sha256="07wzamwl07p20s932aym2jkf6c1zz7d9h7kyby5ka4pw4abynlrv"; depends=[Biobase broom dplyr tidyr]; }; - biobtreeR = derive2 { name="biobtreeR"; version="1.2.0"; sha256="0v8hfzyyrj9k495b58lg769748vvv03ja6g2lrabz7w64r2ng679"; depends=[httpuv httr jsonlite stringi]; }; - biocGraph = derive2 { name="biocGraph"; version="1.52.0"; sha256="02y7vizc6jv8y9r8chsda4yysim0ch45i3rasqvv7m85zqsskf75"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.58.1"; sha256="1by2639z7n62z84dr8rj9jz12gsd1k8q42zsnxacxbwfwp6h0cl4"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; }; - biocthis = derive2 { name="biocthis"; version="1.0.10"; sha256="0f6zbxmyxwka1n89waccaz42sbj6snyxn7nggzmzm5lcfahb5g5g"; depends=[BiocManager fs glue rlang styler usethis]; }; - biomaRt = derive2 { name="biomaRt"; version="2.46.3"; sha256="0gwmd0ykpv0gyh34c56g5m12lil20fvig49f3ih1jxrxf3q4wmq7"; depends=[AnnotationDbi BiocFileCache httr openssl progress rappdirs stringr XML xml2]; }; - biomformat = derive2 { name="biomformat"; version="1.18.0"; sha256="105p0aphx7csxdd9nviqirwqc72liqbi79qjyn2z5fv21450pdpc"; depends=[jsonlite Matrix plyr rhdf5]; }; - biomvRCNS = derive2 { name="biomvRCNS"; version="1.30.0"; sha256="1zsgss1m5wfp7i6iirqghjhmdkdrgxpj1cvx48fxn54sjylcmhk1"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; - biosigner = derive2 { name="biosigner"; version="1.18.2"; sha256="0i18j4fk91x5017yk1l35c58k5aby22yh81zkp59irphpv9akvjn"; depends=[Biobase e1071 MultiDataSet randomForest ropls]; }; - biotmle = derive2 { name="biotmle"; version="1.14.0"; sha256="1i92w8llf2a4a1m6nf4v60pbd6c4gwwvjqj3n7lx4y3gl029146w"; depends=[assertthat BiocGenerics BiocParallel doFuture dplyr drtmle future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; }; - biovizBase = derive2 { name="biovizBase"; version="1.38.0"; sha256="10jflvadfcgxq2jnfxkpn417xd8ibh3zllz9rsqnq5w3wgfr4fhq"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - biscuiteer = derive2 { name="biscuiteer"; version="1.4.0"; sha256="1y8bim3v4ljxz3q04hrarv8xc5d22y6wn0y4q2z6mj6afj8z2wd4"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - blacksheepr = derive2 { name="blacksheepr"; version="1.4.0"; sha256="167b48py7ni09sagr004nwmbp49l222djs91lbya5cr6adpwfmgv"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; }; - blima = derive2 { name="blima"; version="1.24.0"; sha256="101dh2skd1n0d25vp27nfw0x82s3dgdqs45fd3ci51g7s825mqix"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; - bluster = derive2 { name="bluster"; version="1.0.0"; sha256="0izrf82m5znyrgai5y5jss4k2brabh4ajxdvnlwwc92l5bw7jp61"; depends=[BiocNeighbors BiocParallel igraph Matrix Rcpp S4Vectors]; }; - bnbc = derive2 { name="bnbc"; version="1.12.0"; sha256="0sk7aha6gh1kizzmhbgj2j87wjf63nj77491l7w58r8rk0naklbh"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; }; - brainflowprobes = derive2 { name="brainflowprobes"; version="1.4.1"; sha256="1qkpibh2rhs5k2af1mc23a19n85bhdcfhgwxn8n1z4mnl3x9m4wi"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; }; - branchpointer = derive2 { name="branchpointer"; version="1.16.0"; sha256="087jal21g1sg9c4mx26w8mvanjf6vam9l3zfwdjhizqir7jpabs8"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; - breakpointR = derive2 { name="breakpointR"; version="1.8.0"; sha256="1q51v0rikiljy3c8xcpxi8i7l7zqgqa94jxw51pw6jw9dhlg2z11"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; - brendaDb = derive2 { name="brendaDb"; version="1.4.0"; sha256="1wignh6zjx9sv9ij0cycy3df6zjw8kn8igm74i2ccdlrlaagcgr4"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; }; - bridge = derive2 { name="bridge"; version="1.54.0"; sha256="0bj0701w5jzkcis1aqdvv12w1b6vd08dqk95mipsq1jja6n2qxlw"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.26.0"; sha256="0m4k1bi12kqrizc2kglxm5iqgbfgqp0rlbl0hh2jagb4kzqm2lyv"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; }; - bumphunter = derive2 { name="bumphunter"; version="1.32.0"; sha256="0hfl820kfxydv5kpgyly7sibv2sp6dqsmc78qm33n81w4z4j0mkk"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; - cBioPortalData = derive2 { name="cBioPortalData"; version="2.2.11"; sha256="0ixpp5i2sz0gyvrdn5j3z0xvm1dcpyhljcvmm91wl73f3vag55ji"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; }; - cTRAP = derive2 { name="cTRAP"; version="1.8.0"; sha256="0vwp42yj2w0x4y4fsbjv4jafxszmnk1x8qzws2f37m29qfc32gsq"; depends=[binr biomaRt cowplot data_table dplyr DT fgsea ggplot2 ggrepel highcharter httr limma pbapply R_utils readxl reshape2 rhdf5 scales shiny]; }; - caOmicsV = derive2 { name="caOmicsV"; version="1.20.0"; sha256="0zy932yhmxvsx5rcgijm6va8q8zslz90rq1a8rvj2v66ah4ldw1a"; depends=[bc3net igraph]; }; - calm = derive2 { name="calm"; version="1.4.0"; sha256="1v0py6dfqj7dpiczzbkc99iq3s9spsmkhkpkjrvk70bp58g9mdw6"; depends=[mgcv]; }; - canceR = derive2 { name="canceR"; version="1.24.0"; sha256="01cs7psy86kc0xbbkhdd596ravrar8qw49gnbspni04gzfdqna0q"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; - cancerclass = derive2 { name="cancerclass"; version="1.34.0"; sha256="1411hhqqgxlkrp6q4ma7mcydq3yj83q7b6njv2wl4qgbgyh7pmvw"; depends=[binom Biobase]; }; - casper = derive2 { name="casper"; version="2.24.2"; sha256="04wndh7mcnngd8xkh7rjzwcwh1x5p6c567j797gxsiw1iligkkml"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.34.0"; sha256="06g132cr1dlc587pmal3x0q6la905rirkznq1rdk53rsx3qsd87f"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; - cbaf = derive2 { name="cbaf"; version="1.12.1"; sha256="05m6g4cb09s8g8m8mmxbzf4zr2cmvvm3skpajdxzkafkayz6i16k"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; - ccfindR = derive2 { name="ccfindR"; version="1.10.0"; sha256="0snba2yncql9zsajj6237lxqlnq2rr4p99jxf9lhbai0mbirl725"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; - ccmap = derive2 { name="ccmap"; version="1.16.0"; sha256="0ph587ha2zbc47y374pnb39avlfmqfjqp0w0rxw5xg7j802rmr4k"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; - ccrepe = derive2 { name="ccrepe"; version="1.26.0"; sha256="1sma3d8r5dxx2h7x70dkggnm11rr0krhmnz4z6na6b3p5nayscfk"; depends=[infotheo]; }; - ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.2.1"; sha256="1fgln5drqfdh6pjsicq72xz2y6vyg679vb9anp39wizfwvbxwkc7"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; }; - celaref = derive2 { name="celaref"; version="1.8.0"; sha256="198lri5rngmaq1jn3gd7w79sdf2lfn1b49bcd0pjia7bnr3nvchf"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; - celda = derive2 { name="celda"; version="1.6.1"; sha256="1gv3syy5ravdp2g7z4iw649gkhz5anbkz5d35lpkqmxmv17c02l1"; depends=[circlize ComplexHeatmap data_table dbscan DelayedArray dendextend digest doParallel enrichR foreach ggdendro ggplot2 ggrepel gtable MAST Matrix matrixStats MCMCprecision multipanelfigure plyr pROC RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment stringi stringr SummarizedExperiment uwot withr]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.54.0"; sha256="134a72lz05mcisvy9kvmwr432zhrsih4j7rnzb2q0zjyka8xxlx0"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit RColorBrewer splots vsn]; }; - cellTree = derive2 { name="cellTree"; version="1.20.0"; sha256="1ar77qfmnqsjcnhfwv6jdry8s0js8rww9l2r5k4gc2xcjfrm5mgh"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; - cellbaseR = derive2 { name="cellbaseR"; version="1.14.0"; sha256="1qs3vzf22cvbm6v7gcva56mir1wabx9sy95j2giqn85sckffhkrm"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; - cellity = derive2 { name="cellity"; version="1.18.0"; sha256="0587mwan3l2mqdjanqn9a03dk43zm6ad747qgfjn95xqgi6l96w1"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; - cellscape = derive2 { name="cellscape"; version="1.14.0"; sha256="17h8fjyfk4gmn9a8slp0kycwycj9n4zs49vzwhp0rad0yjs321hy"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; - cfDNAPro = derive2 { name="cfDNAPro"; version="1.0.0"; sha256="1ixi95809p5sxaaqfnay3lrq534cdsv87dif3nzfcikmw5bhf5c9"; depends=[dplyr ggplot2 magrittr quantmod rlang Rsamtools stringr]; }; - cghMCR = derive2 { name="cghMCR"; version="1.48.0"; sha256="1imll1iswp9x5rc34wdqdr49r0as2hjhsg6jcpg664w0bwqa29h2"; depends=[BiocGenerics CNTools DNAcopy limma]; }; - chimera = derive2 { name="chimera"; version="1.32.0"; sha256="18iyq62ail7l9m5gb1kaia81wg57k15hk00lzpv71hxh1i87cnf2"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chimeraviz = derive2 { name="chimeraviz"; version="1.16.1"; sha256="1bvas72yivn70gdbmqz1a64y0f7cwr0s9w4zqwgcpah9cwlw0hd5"; depends=[AnnotationDbi AnnotationFilter BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; - chipenrich = derive2 { name="chipenrich"; version="2.14.0"; sha256="01hv77vrnbvbmm5c45vzihn8k9ciwka251f1rbf9nxxax64vmvly"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; - chipseq = derive2 { name="chipseq"; version="1.40.0"; sha256="12pzq24aarvgxfmhcad0l5g951xqdvvi7bspgbsvlvmfkqd74j2v"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; - chopsticks = derive2 { name="chopsticks"; version="1.56.0"; sha256="0rrhc1q6fy5q85c60mwpsj4mcwbhhjqr3njrfq89xwkif52pgx38"; depends=[survival]; }; - chromDraw = derive2 { name="chromDraw"; version="2.20.0"; sha256="1kmqkzz0mg4yv8bw71zklmd2aw0q4z706qk2n8ish8l60zdwwnv4"; depends=[GenomicRanges Rcpp]; }; - chromPlot = derive2 { name="chromPlot"; version="1.18.0"; sha256="0vabxma08aa196mhmf8wi4mlqjm2qyq3ai2q5w37grg1py00xny3"; depends=[biomaRt GenomicRanges]; }; - chromVAR = derive2 { name="chromVAR"; version="1.12.0"; sha256="0dn04ijgq8fncn2bkvnd0lnabjg2s4mpb91b3kwvv3nkgjgfx819"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; - chromstaR = derive2 { name="chromstaR"; version="1.16.0"; sha256="0vgpb7g2cncdn82hia2yzzachyns2zbd7906662g990qjnp2xlm1"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; - chromswitch = derive2 { name="chromswitch"; version="1.12.0"; sha256="0i182x1q1ahx49mdh9v9d6vxdiq2x1hiiccrr6flmrchz4vzvgsy"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; - cicero = derive2 { name="cicero"; version="1.8.1"; sha256="12y857p4p0m7k72bimli8wjn9cd0gxjwcs3n7ri9pn9l9d42krqr"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; }; - circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.4.2"; sha256="0r1hfm3pc7c71irzmxmdwc27ns9hkymz4vhb4pqbli4xn37q7cg8"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; }; - cisPath = derive2 { name="cisPath"; version="1.30.0"; sha256="178v24a5as5kk9sacpr8xc8y8mc8lqzv34n7hdn51a1ycyfb11s2"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.28.0"; sha256="1v7bngimr4q93339n5njin7n2rgjjji3kqlk19gaz97wnhrp3pvx"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges seqinr]; }; - cleaver = derive2 { name="cleaver"; version="1.28.0"; sha256="0mf8mc8m8zkbgv99x0ybpwxfb2l178r4m3afp1rdq78h7nbrxm9m"; depends=[Biostrings IRanges S4Vectors]; }; - clippda = derive2 { name="clippda"; version="1.40.0"; sha256="1kr127awabbc4as1wsfvrsa1r68f4ngm35gynlb4jj840sghg86z"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; - clipper = derive2 { name="clipper"; version="1.30.0"; sha256="1f9xplpb1r8d62rclz44r4g0dqkhi78whncjnh1m3yfh7d63nh8l"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; - cliqueMS = derive2 { name="cliqueMS"; version="1.4.0"; sha256="0qvjcs9ysk8f7251ng43vcy09shwdlnqlgn4hmpwpzcnviimjq32"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; }; - clonotypeR = derive2 { name="clonotypeR"; version="1.28.0"; sha256="04r4f5v60yi7y15yy4idvlygyc2nl1a2jk02w44w2h86jyvdblfp"; depends=[]; }; - clst = derive2 { name="clst"; version="1.38.0"; sha256="0n9gn4ngz4r04zfqw1mkq6rsb59c7mi3d6miihf89nsi6q37cznn"; depends=[lattice ROC]; }; - clstutils = derive2 { name="clstutils"; version="1.38.0"; sha256="1ijw2m8mw4y9l5c7pnqs5gwqhhkq5pbnajfn0bd9sqwy4s2y5jgr"; depends=[ape clst lattice rjson RSQLite]; }; - clustComp = derive2 { name="clustComp"; version="1.18.0"; sha256="040k95122f8vzi9ix1lfd0j2nrhd5f2l0w4cwp6lxfqkvhcncxym"; depends=[sm]; }; - clusterExperiment = derive2 { name="clusterExperiment"; version="2.10.1"; sha256="04n3lcm7dh07sjkzyv83m55mx3lz0lkcy8yq9hi0zywqyrhyzz7z"; depends=[ape BiocGenerics cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats mbkmeans NMF phylobase pracma RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="3.18.1"; sha256="04v1xsxfxxy8rdjfswv4crpzkx9592r2sh3cjh1kb54sd4lyb6si"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim magrittr plyr qvalue rlang rvcheck tidyr]; }; - clusterSeq = derive2 { name="clusterSeq"; version="1.14.0"; sha256="1c0wplyshn6kg01rzybawwqxjqbdy8ik6cxg3xnfj3yx6c6n30j8"; depends=[baySeq BiocGenerics BiocParallel]; }; - clusterStab = derive2 { name="clusterStab"; version="1.62.0"; sha256="0v0in4i3q1rhja927cj8bj4xdgx6imndq4dvr8bb2fsvycj9z7cs"; depends=[Biobase]; }; - clustifyr = derive2 { name="clustifyr"; version="1.2.0"; sha256="1i635n86pfmzv9qra48wiswl3cgy684rhjw6wzspy5pjagldq0xw"; depends=[cowplot dplyr entropy fgsea ggplot2 httr Matrix matrixStats proxy readr rlang S4Vectors scales SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; }; - cmapR = derive2 { name="cmapR"; version="1.2.1"; sha256="0i3kb01xkwaaq4kqw6nwnrj3jk78zlq117sc82yzlz6m65f91whv"; depends=[data_table flowCore matrixStats rhdf5 SummarizedExperiment]; }; - cn_farms = derive2 { name="cn.farms"; version="1.38.0"; sha256="001a5rvkq8kdblybr30mnl0v0jqm7qip518njfhhlc3g46pwhahv"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; - cn_mops = derive2 { name="cn.mops"; version="1.36.0"; sha256="1r5m0791c4inh8yyrsbqbn5dncrx1nx5pqi2gm5rhfwwca6a6crf"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - cnvGSA = derive2 { name="cnvGSA"; version="1.34.0"; sha256="0nzg3nr2giddcv2jlgypb264i2gxgdksfjrr6xx8gilha814a14w"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; - coGPS = derive2 { name="coGPS"; version="1.34.0"; sha256="1vvrarixpvjyv769pbhmshpd5xl2a2qsx1rf362k7zqdyl6ikihs"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.22.0"; sha256="1y26nfmvfp2f466phyv6k4if8zhz2z7b1ljrkwkviwrr8pzc8pr8"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; - coRdon = derive2 { name="coRdon"; version="1.8.0"; sha256="1msrasdci9zc6dk8r0haqvkz2v89nncwxv9ignz993ks8m86bncc"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; - codelink = derive2 { name="codelink"; version="1.58.0"; sha256="07019p9cxz0vr1fchw5aj2d7g1wyh6kxh80cnwyvc292p7y7wxql"; depends=[annotate Biobase BiocGenerics limma]; }; - coexnet = derive2 { name="coexnet"; version="1.12.0"; sha256="1ccz2phfxrfqc0q6c505yskancmg0bi22p8jn60kygfvy2hirw08"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; - cogena = derive2 { name="cogena"; version="1.24.0"; sha256="08rxbpd4w0df3sm3pjvhkrnh95543kdcyakzi9kwna6nz6f4kzd2"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; }; - cola = derive2 { name="cola"; version="1.6.0"; sha256="1qbsc2ja8crc8fpf0qdbqwlqcggvqj3ih986r6dprz1613bqr6zf"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest eulerr GetoptLong GlobalOptions httr impute knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; }; - combi = derive2 { name="combi"; version="1.2.0"; sha256="17jiknjrxcl798blwj3mnx45fjqssivw9mf7vq9bz168dnb76cxz"; depends=[alabama BB Biobase cobs ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; }; - compEpiTools = derive2 { name="compEpiTools"; version="1.24.0"; sha256="0jjy8z3z01k8khrrwm7d5kyai5v41adz1ms3j9wibhpr293gg4yw"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; - compartmap = derive2 { name="compartmap"; version="1.8.0"; sha256="00zflkznqpbhmagv5pswg6h6g508lcsjdins17fd0rcirp2lxy5p"; depends=[GenomicRanges gtools Homo_sapiens minfi mixOmics SummarizedExperiment]; }; - compcodeR = derive2 { name="compcodeR"; version="1.26.1"; sha256="05bl66awzadrq0z7pgzasrq2chyl4drz81msrvynvb019f9cb894"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - consensus = derive2 { name="consensus"; version="1.8.0"; sha256="0gslsbnqjamyaxcrv0f4wwz222zv0kvikih2xakbhr00wywr1gwv"; depends=[gplots matrixStats RColorBrewer]; }; - consensusDE = derive2 { name="consensusDE"; version="1.8.0"; sha256="1glpcqcrvjxgh5ldpiy4a7ryahv47ks2j9lzgdll1ccr4sb18rfr"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; - consensusOV = derive2 { name="consensusOV"; version="1.12.0"; sha256="0pw2h8mal1rz1y43cyh14bhcnqv2dk41m12rsdjdnj5jgn9s74i4"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; - consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.18.0"; sha256="19r5naghqsv77v40qq4kdz4h0ig72zj6n8s0013r4dikarkdg7k4"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; - contiBAIT = derive2 { name="contiBAIT"; version="1.18.0"; sha256="1xmmyd9gvjg5hbs9g868qrnd0p3c13hzjkpgzip65mk5p7yib6q6"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; - conumee = derive2 { name="conumee"; version="1.24.0"; sha256="1z06l5qgppbcxp988gfqz2g07m0b0102wkxn5fzkghdc6mviz51q"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; - convert = derive2 { name="convert"; version="1.66.0"; sha256="13zbs365q9kp627hrgfnqcvldfn6gi89ifv61p4im6i0jk7snchc"; depends=[Biobase limma marray]; }; - copa = derive2 { name="copa"; version="1.58.0"; sha256="0crnx31hhnwl12j6gfv2magb3104gsgl0say4g3vl4rw654icylq"; depends=[Biobase]; }; - copynumber = derive2 { name="copynumber"; version="1.30.0"; sha256="00fyfy3kpz33v1hqisd5m5xdazwjmjrfj8ssbf6p9m3am2ar23gm"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - corral = derive2 { name="corral"; version="1.0.0"; sha256="1s92ac29gypv384k6fsr1d6llykn9i514i6xxlrjhsg2ajyd8xwq"; depends=[ggplot2 ggthemes gridExtra irlba Matrix MultiAssayExperiment pals SingleCellExperiment SummarizedExperiment transport]; }; - coseq = derive2 { name="coseq"; version="1.14.0"; sha256="0a9r54gcxay2s9vxgvbja19ilq58qpnd98cy0wzllagxs1my7hzh"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; - cosmiq = derive2 { name="cosmiq"; version="1.24.0"; sha256="0rcv1rbdnhiwwsh7a0b690c8lcv1vmm6xgvsgfjgxp07rfz5zxkp"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; - countsimQC = derive2 { name="countsimQC"; version="1.8.1"; sha256="12rpdb9jzyv8lhs99nhxkbpxr0cy7gdfxs7ijns7ffkq7ycc4jjq"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; - covEB = derive2 { name="covEB"; version="1.16.0"; sha256="0721j8xd3dzkcplrzrnsk6fcc1sbzfsi3y94vynbr37qzasg0ff7"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; - covRNA = derive2 { name="covRNA"; version="1.16.0"; sha256="06bk9lz6bd1lm3y6g6y0i9s3nwsmp4lzw8li0ydsd6kcqwz1s08v"; depends=[ade4 Biobase genefilter]; }; - cpvSNP = derive2 { name="cpvSNP"; version="1.22.0"; sha256="1il0g85s93mvpfx88pykqpd7kmxkaj4hyrcji5z8jr8rqk16x8mj"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; - cqn = derive2 { name="cqn"; version="1.36.0"; sha256="02a7xzkkid2gix1q7bmn6al72dx886qpycvn72ahn866z89bsskf"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crisprseekplus = derive2 { name="crisprseekplus"; version="1.16.0"; sha256="04d2laiigdjipiw3a8jh9iib1cbrxmc4f4wyjmb36bkiabad0fk7"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; - crlmm = derive2 { name="crlmm"; version="1.48.0"; sha256="1vk2dd1acia8pxzdl6djfv96b7i4bjvmb72hqlf1jgaxqf1zxznj"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; }; - crossmeta = derive2 { name="crossmeta"; version="1.16.1"; sha256="17jvpvrcm61nvw0dqwqnk2a6v94i1d872m426y02mgia1i02n8av"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager data_table DBI DT fdrtool GEOquery limma matrixStats metaMA miniUI oligo randomcoloR RColorBrewer RCurl reader readxl RSQLite shiny shinyBS shinyjs shinypanel shinyWidgets statmod stringr sva XML]; }; - csaw = derive2 { name="csaw"; version="1.24.3"; sha256="1m4gls7qmrnlr3ss2bfx4fvqwq8zf3hws974iw0h4l2gnvy1kb2a"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Matrix Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - ctc = derive2 { name="ctc"; version="1.64.0"; sha256="1nwlphbfba3w8ixck02k5c84qm4flnp9fd68li0jn5a08qi9gmyp"; depends=[amap]; }; - ctgGEM = derive2 { name="ctgGEM"; version="1.2.0"; sha256="0jx5vbbxpynay1maihz0faaqfhj3v85mfz878244411mzwjn4ldb"; depends=[Biobase BiocGenerics destiny HSMMSingleCell igraph monocle sincell SummarizedExperiment TSCAN]; }; - ctsGE = derive2 { name="ctsGE"; version="1.16.0"; sha256="1ksg1zf9h5prxad70hjhw2yif3k09h27mxi4ylknam5baknl1ygf"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; - cummeRbund = derive2 { name="cummeRbund"; version="2.32.0"; sha256="1x7rby50api1c66al6a0i92q82ydjmh3h8l2k7hj0ffpn8c5pdgj"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; - customCMPdb = derive2 { name="customCMPdb"; version="1.0.0"; sha256="0qvws4g0935pzzb7gwrv2bwhs7pvnaf48k9473x7pkhsvpxlih1d"; depends=[AnnotationHub BiocFileCache ChemmineR rappdirs RSQLite XML]; }; - customProDB = derive2 { name="customProDB"; version="1.30.1"; sha256="0hln4zyyi1ms9viw81rw1cnkzd629z7vjal2asj9sv8dr2nkf5rr"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; - cycle = derive2 { name="cycle"; version="1.44.0"; sha256="0v7zarppd48bh0x34yw2191l6dw5dbfzgv5fysd1b2ww0h0385bq"; depends=[Biobase Mfuzz]; }; - cydar = derive2 { name="cydar"; version="1.14.1"; sha256="014n45vnfa9as77hj05lbgqdg860ri2avv2jij42l0fj0pm810d8"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; - cytofast = derive2 { name="cytofast"; version="1.6.0"; sha256="01i2hxh5irjwk5lf9vylblinxy5mipl5m091d2yjpsnbr8d4qg6i"; depends=[flowCore FlowSOM ggplot2 ggridges RColorBrewer Rdpack reshape2]; }; - cytolib = derive2 { name="cytolib"; version="2.2.1"; sha256="0y8mxrg3jh9bahsf9rblgyja37m1x1ncxfnrli91xjyg0582kh7r"; depends=[BH Rcpp RcppArmadillo RcppParallel Rhdf5lib RProtoBufLib]; }; - cytomapper = derive2 { name="cytomapper"; version="1.2.1"; sha256="0lv4v69c5mbi967h5dqfiqixl50s40f5hfiymh6msgjwfd9lb0a5"; depends=[EBImage ggbeeswarm ggplot2 matrixStats raster RColorBrewer S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment svglite svgPanZoom viridis]; }; - daMA = derive2 { name="daMA"; version="1.62.0"; sha256="0sygy03vzfiqmm0ll0c28dm3q5knhif3nvrh3r3gwk59fa9w5xbc"; depends=[MASS]; }; - dada2 = derive2 { name="dada2"; version="1.18.0"; sha256="0lq4w04p0k70qhai8c0krh47vz3f5c3zpb06r1fbxbz6czg600a0"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; - dagLogo = derive2 { name="dagLogo"; version="1.28.1"; sha256="1ppkzdayxx5r9kdnjh3drzs0w7kd72byw69kq3bqa62j2c0wyq6d"; depends=[BiocGenerics biomaRt Biostrings motifStack pheatmap UniProt_ws]; }; - dasper = derive2 { name="dasper"; version="1.0.0"; sha256="1mfsh8l2jn36aq9if1la902fmx3vlhq0v9f8vdg4mcs3a9d15zzx"; depends=[basilisk BiocFileCache BiocParallel data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges magrittr megadepth plyranges readr reticulate S4Vectors stringr SummarizedExperiment tidyr]; }; - dcGSA = derive2 { name="dcGSA"; version="1.18.0"; sha256="0w85a3pmgzk4nrbaq0b4hk2dah067m69cbyxs17ir4knky2g315s"; depends=[BiocParallel Matrix]; }; - dcanr = derive2 { name="dcanr"; version="1.6.0"; sha256="1r07h55s83413hdw0nxf713fws4x5jvnn7pq6ldidl21fqsmi32l"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; }; - ddCt = derive2 { name="ddCt"; version="1.46.0"; sha256="12jj1kms2hhaf7ysxzy7ngcdxl1ks3747d9jfq46vnmf34ljj8jy"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddPCRclust = derive2 { name="ddPCRclust"; version="1.10.0"; sha256="12zk7c5brcvdwqrqxfsph7gn73h389vw3b0ybfqnvjmya3bzhnl1"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; - dearseq = derive2 { name="dearseq"; version="1.2.0"; sha256="1w39wa07lwi1272jlbfgr49x8jf9pwh8k4rhl4y4hjx7p20ncyil"; depends=[CompQuadForm ggplot2 KernSmooth matrixStats pbapply statmod]; }; - debCAM = derive2 { name="debCAM"; version="1.8.0"; sha256="0z0rmrn2ryjhwn0mipz0vafzqb8r73fpkj7px451avxjycljy7v7"; depends=[apcluster Biobase BiocParallel corpcor geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; - debrowser = derive2 { name="debrowser"; version="1.18.3"; sha256="0mzi6hrhnbx5wih0mmz0a548mb1zgbmszl7ffq97arikhsskixjp"; depends=[annotate AnnotationDbi apeglm ashr clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; - deco = derive2 { name="deco"; version="1.6.0"; sha256="1biwndsckdjf8783rrb33d5fp7nvagncmdakyaq0l67pj2ywp9cw"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; }; - decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.6.0"; sha256="03lck4jdfps3xyw6d2c8pzfhh7sjqz9b2k0zcrxjva08xdw6r6xd"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; - decontam = derive2 { name="decontam"; version="1.10.0"; sha256="1y6xqzn1j8f6ahpjq1b91ni82m9vp34g5fyw088cq0ann8zl58fw"; depends=[ggplot2 reshape2]; }; - deepSNV = derive2 { name="deepSNV"; version="1.36.0"; sha256="1lbvx9liql8fkb4y020kwpgp61vzg67cy640dc4kybglcw9dx6j0"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.4.0"; sha256="14wzi351rvgpzmyjwwh4lkd0c99ff4qdssgjlyi6xighfikkk4fh"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.30.0"; sha256="0k6ncsgnp4hdl2daa8wgikfmpm91hz42xinzpzg2mrk6gb83nn0l"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - densvis = derive2 { name="densvis"; version="1.00.6"; sha256="17vq023axxwcsdaq5fqamv7r2q5l96zad8dlp1xhdvva1lncf20c"; depends=[assertthat basilisk Rcpp reticulate]; }; - derfinder = derive2 { name="derfinder"; version="1.24.2"; sha256="02av756qws54xziajdqs3z8jwrqqzy05yqasb8f853766vb21jpj"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.24.1"; sha256="1j6mvrr0m14jmvx9rjbl7xnhi9ng4nsx75i9445wa0zlz4iklpcb"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.24.1"; sha256="06dn08rhmnkjgwxb7sgp19vgybm6y22dv18bjnwhh0yx76c8dhfj"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; - destiny = derive2 { name="destiny"; version="3.4.0"; sha256="1i7f5q02zvpfaxhd76fbw0h1wfgjphyn5hrmrjpvlnv4ardzsir2"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; }; - dexus = derive2 { name="dexus"; version="1.30.0"; sha256="1r36d1flvc0qqng3rfxf3ndvcq7d4njyn5irfyn5i18ag2l0zzc2"; depends=[BiocGenerics]; }; - diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.72.0"; sha256="05zmrlxp1l007i449ihnhax0hb5b5kawydwgn6m3wny0bll53q0b"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.22.0"; sha256="1mpcfmz9xixbznzg77kzs5p5c2dkh82kaxyqk7lbacsmixhq61lv"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; - diffcoexp = derive2 { name="diffcoexp"; version="1.10.0"; sha256="1qcsgkqdq3ribzazdng6wi1x4l48fmi8c8r0k95a1vkmndzc44x2"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; - diffcyt = derive2 { name="diffcyt"; version="1.10.0"; sha256="068hv0r3lmyvi5ql2ijzbkm9h1n1xb9c8dlmy55syyxdmksfhpn9"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; - diffloop = derive2 { name="diffloop"; version="1.18.0"; sha256="1m19r72jsd63v02smpxq60y7m7s22m7phlhc844r9vncpw2801rj"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; - diffuStats = derive2 { name="diffuStats"; version="1.10.2"; sha256="0vdwja0jybcp3a2cwn8kbcbr4qkm2m1riqng2kyyfni1z4d0nprr"; depends=[checkmate expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; - diggit = derive2 { name="diggit"; version="1.22.0"; sha256="0qwpwagjbygzs7azgrd7870jx73q76qxssird1zpjl822z51j4k6"; depends=[Biobase ks viper]; }; - discordant = derive2 { name="discordant"; version="1.14.0"; sha256="1kb6n5m3vwdgrb7ng53pqhqsz8qhpx1jl8mvjv3j1bhckjks1bmc"; depends=[Biobase biwt gtools MASS]; }; - distinct = derive2 { name="distinct"; version="1.2.0"; sha256="1cmgsjfxs2m3ilzvgmv6q03drxp5pv5p3rxd524rzd6hyi5l4kc6"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo scater SingleCellExperiment SummarizedExperiment]; }; - dittoSeq = derive2 { name="dittoSeq"; version="1.2.6"; sha256="1ncr46gfpjwmcpvybbqds769rpdv4la7ay13hbzxncjy94lnb3wa"; depends=[colorspace cowplot edgeR ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - divergence = derive2 { name="divergence"; version="1.6.0"; sha256="0glblmsriz72dvvh1m99k1skwwlnmr954zzp4crm7xndkqjsmgpv"; depends=[SummarizedExperiment]; }; - dks = derive2 { name="dks"; version="1.36.0"; sha256="04v3dncywbiybrhnjjjx3lszb0z3kzqvvjaq6nwqx6yc2galaq8f"; depends=[cubature]; }; - dmrseq = derive2 { name="dmrseq"; version="1.10.1"; sha256="002clhcc5w3jbfmxrnfgbp4kgv7zmbiyk9p17lq2193d3f3ssi86"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; - doppelgangR = derive2 { name="doppelgangR"; version="1.18.0"; sha256="1hc65j5600xc9rn8q8fz39lcibmn7h99dpyypvva79kk287qg09d"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; - doseR = derive2 { name="doseR"; version="1.6.0"; sha256="1003x9rbjda2hagnbrrqw5q2vj82k8b0frhl1kgx3k78yv3xq096"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; }; - dpeak = derive2 { name="dpeak"; version="1.2.0"; sha256="1q6xsbq4bpdx35fsk7zzzb04vc584jr6sy7f7ls82q8d9njj69xv"; depends=[BSgenome IRanges MASS Rcpp]; }; - drawProteins = derive2 { name="drawProteins"; version="1.10.0"; sha256="1vbjv3xyjrrdmw7bvdx0l760n8nrgjzj3qjfz5h2ss1b9a7pjk6r"; depends=[dplyr ggplot2 httr readr tidyr]; }; - dualKS = derive2 { name="dualKS"; version="1.50.0"; sha256="0y0076ip7kwbjfkg0vyvaxws0lgjd9i05j0dzwwcf2b5cgvy9lgc"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.20.0"; sha256="1m72bqpnn98zi14g7zinlmp47xdlwnayrzvz74xsbd6zqbkfq8m4"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.50.0"; sha256="0qvbhpvjsj59r2qabj5mcdcnjq2dj6llf37rcl6idxzw9caijrn3"; depends=[Biobase marray]; }; - easyreporting = derive2 { name="easyreporting"; version="1.2.0"; sha256="022g4xb55qnz1hz8jlzr7v2m9073w2f1g9z7cnrypvl12b7z5c6r"; depends=[rmarkdown]; }; - ecolitk = derive2 { name="ecolitk"; version="1.62.0"; sha256="0wa992fm4mhx91246zj0ynbnxd5dy58msq7x8qvjwmnhbxp9cn9c"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.22.0"; sha256="1iq2j365yplsfn5kzzr9cd7yq71y7jv222dxa1yx11cyqfwhr7b1"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.32.1"; sha256="1gaic8qf6a6sy0bmydh1xzf52w0wnq31aanpvw3a30pfsi218bcp"; depends=[limma locfit Rcpp]; }; - eegc = derive2 { name="eegc"; version="1.16.0"; sha256="07hwc75mifmkag6v0a1l2xgka53q9fgrgg9g2n826y6j7rw47rm5"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; - eiR = derive2 { name="eiR"; version="1.30.0"; sha256="0r9hmpryi379k7d1ipwqhdahyqpb9w032qjlhj5vgjjijx5w6yc3"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; - eisa = derive2 { name="eisa"; version="1.42.0"; sha256="0ji0nxcgnzvvhj8nqimr0i82wkwhyh0rcdxiav9207jl81qkbpj7"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - eisaR = derive2 { name="eisaR"; version="1.2.0"; sha256="169zf52rcapcjyxzn9zwajjw35zh72x42n65l0vdyxjjcymgxqdh"; depends=[AnnotationDbi BiocGenerics edgeR GenomicFeatures GenomicRanges IRanges limma rtracklayer S4Vectors SummarizedExperiment]; }; - enrichTF = derive2 { name="enrichTF"; version="1.6.0"; sha256="0qv5q6sc0b8ac4z4bncjx4f3f79bqi9609zl6n1gzymvvqgdmv21"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; }; - enrichplot = derive2 { name="enrichplot"; version="1.10.2"; sha256="0lm5yapd567jxcnz9m4a623aymf3q00svjrxp3rf0r9j77dgyisv"; depends=[cowplot DOSE ggplot2 ggraph GOSemSim igraph magrittr plyr purrr RColorBrewer reshape2 scatterpie shadowtext]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.32.1"; sha256="1b9v5nad124akwps7qli44xb39yqlgzc851bys3j59qz8vsnw4xd"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="2.14.1"; sha256="1hxwfh19qafpdhzprvw4nr8ks3gz7f0y8gyfhk8yqmmvvnvgqv40"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; - epiNEM = derive2 { name="epiNEM"; version="1.14.1"; sha256="0kbjwjm18m627ywmr64dxasls1sy9fipjk5f6bp64fcidswv6piz"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet mnem pcalg RColorBrewer]; }; - epigenomix = derive2 { name="epigenomix"; version="1.30.0"; sha256="05baryj0np73hfm0vrwmfd4fcjhvz0zfxq4ims2bj6a3shhqf1v1"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; - epihet = derive2 { name="epihet"; version="1.6.1"; sha256="1dsq8117pbccbmyq64cnm0ldpsab6rxyjp5rkgfs27d8sc0f8r4j"; depends=[data_table doParallel EntropyExplorer foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; }; - epivizr = derive2 { name="epivizr"; version="2.20.0"; sha256="13san5i3q39x4pwxyjwaiw7633hsl4vwhnz5k4k361fvz423a6qv"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - epivizrChart = derive2 { name="epivizrChart"; version="1.12.0"; sha256="0j8xfl2yxwhbxlsxfi132zhpqbd7n8sn1ikrb6w3agvxikcxx6a2"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; - epivizrData = derive2 { name="epivizrData"; version="1.18.0"; sha256="11kxxjnhlh4cb0l88in3f63ppwpprsbx164dxszdlkmng7rcnalm"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; - epivizrServer = derive2 { name="epivizrServer"; version="1.18.0"; sha256="1bi25kk23si6j8bczhwdk84687gc89bnyjhp08na6j8qpflfa0vv"; depends=[httpuv mime R6 rjson]; }; - epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.18.0"; sha256="05nwwfhfsramv7a2krm1jy2xgwm0whgjw61gak69ak4pq2sr9gvh"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.24.0"; sha256="08x4dpzbgkmzw4as16p7dmrp9mypdrr3aj08m32j9rnnq6hrb3sc"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="1.6.0"; sha256="1k2j1xhv0vwn45xmh8ds0gz812px5hnpgzvp37ngsdn4j5ai1l0k"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; - esATAC = derive2 { name="esATAC"; version="1.12.0"; sha256="1zjn76q546f22qh50j8nkwjv3f89iid91a9py0dcdlfkg6f1yvl4"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; - escape = derive2 { name="escape"; version="1.0.1"; sha256="0yhnq8qy4xjm0m3g1paq0wncha5yc616icarhaq9ggmrqmhzmfc4"; depends=[BiocParallel dplyr ggplot2 ggridges GSEABase GSVA limma Matrix msigdbr SingleCellExperiment]; }; - esetVis = derive2 { name="esetVis"; version="1.16.0"; sha256="15smsm6d7gw2rbgwg0pip57l7a33r193dhg0vm5yhqvm6whg4d7f"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; - eudysbiome = derive2 { name="eudysbiome"; version="1.20.0"; sha256="07l1yfwyamsl67sszhldz1wdmcr1sbi36765f09mv7n99y8l2rq6"; depends=[Biostrings plyr R_utils Rsamtools]; }; - evaluomeR = derive2 { name="evaluomeR"; version="1.6.6"; sha256="1axmvnhij0wg8zv07vp4v1xi1pa173zbch5alvd183fcy5mgyk65"; depends=[class cluster corrplot flexmix fpc ggdendro ggplot2 kableExtra MASS matrixStats mclust MultiAssayExperiment plotrix prabclus randomForest Rdpack reshape2 SummarizedExperiment]; }; - exomeCopy = derive2 { name="exomeCopy"; version="1.36.0"; sha256="0zczaasz80nch0ixsx23fzdzdf140rw6llm5gs2b7gh3y8zbd5ns"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; - exomePeak2 = derive2 { name="exomePeak2"; version="1.2.0"; sha256="0608pj058ppz9rhjpga00kmjp4cp6mxmqbb31mys3cvfahqs3s9r"; depends=[apeglm Biobase BiocParallel Biostrings BSgenome cqn DESeq2 genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges mclust reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - explorase = derive2 { name="explorase"; version="1.53.0"; sha256="1g23swv1m66sc7sxjh7jm0lrfrbzs01pbdsrgv2jl1fgp15jhly8"; depends=[limma RGtk2]; }; - fCCAC = derive2 { name="fCCAC"; version="1.16.0"; sha256="1hjhbsxzl3z11c0d09nb2ksv9mgjqvi78jh9yk1xmnnq7qkwv5ls"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; - fCI = derive2 { name="fCI"; version="1.20.0"; sha256="0d03gabb5sf2vhhn84jdk9pn06gv9ipqf6ix4mzflrsazcv7dnm8"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; - fabia = derive2 { name="fabia"; version="2.36.0"; sha256="1kkfjpyk6qk5s1r7wdzlykzsyxs78blawlgh1gs3l130iaacgl0g"; depends=[Biobase]; }; - factDesign = derive2 { name="factDesign"; version="1.66.0"; sha256="0anshgfp4wvvjblp1ksw7zj96kxldikmh7n7jn8y2whh82k7md1k"; depends=[Biobase]; }; - famat = derive2 { name="famat"; version="1.0.0"; sha256="13q30a79l78fg6zzk1jni8286yrylpk3fvfxf6nvgv3am6jvyh4i"; depends=[clusterProfiler dplyr DT GO_db gprofiler2 KEGGREST magrittr MPINet ontologyIndex org_Hs_eg_db plotly reactome_db rWikiPathways shiny shinyBS shinydashboard stringr tidyr]; }; - farms = derive2 { name="farms"; version="1.42.0"; sha256="1x56p6zjmsjl5l810v0bqprrdp5lxnixxd6nw31g53xpkarnwsjw"; depends=[affy Biobase MASS]; }; - fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.26.0"; sha256="0bixd7am1bydf1kiwrqghq99qxd20yx2vly85rdqj1v40a5wmnjl"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; - fastseg = derive2 { name="fastseg"; version="1.36.0"; sha256="1ln6w93ag4wanp0nrm0pqngbfc88w95zq2kcj583hbxy885dkg4f"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; - fcScan = derive2 { name="fcScan"; version="1.4.0"; sha256="0gk1cjwmnm2143w8x73fy9bfrw5wjl391clzvbd08kczzdwlk08s"; depends=[GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; }; - fcoex = derive2 { name="fcoex"; version="1.4.0"; sha256="0b2dk1q5ffsznci2svbz7d4glf74vzis6k6qydvhdx3bbyd2yvi9"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph network pathwayPCA progress scales SingleCellExperiment sna stringr]; }; - fdrame = derive2 { name="fdrame"; version="1.62.0"; sha256="0c41l3s8112g2i73fw1bqmnakcfy8kvk47pl04p9bmp6bkyw7zwn"; depends=[]; }; - ffpe = derive2 { name="ffpe"; version="1.34.0"; sha256="1vwnzavj97af2cnr7hkmv4v4sqf1m8yw554dng1bfannfwym7584"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; - fgsea = derive2 { name="fgsea"; version="1.16.0"; sha256="0jmkkayabx3m0lyyc2mxd4vdvv7gv7fbk1r884gplnf2zgsx068n"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; - fishpond = derive2 { name="fishpond"; version="1.6.0"; sha256="16alg6l5672v460f3s5lagcg67ji55lr5yhjhafpy59c39j76dkf"; depends=[abind gtools Matrix matrixStats qvalue Rcpp S4Vectors SummarizedExperiment svMisc]; }; - flagme = derive2 { name="flagme"; version="1.46.0"; sha256="1wjchjs11b7jgg196bxsq0irqh1ki7bhfzsma1qdm0d7mvmfnqjl"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; - flowAI = derive2 { name="flowAI"; version="1.20.1"; sha256="099mfm59vm0pfmap34lrgzy32046q8h9y3v30jzfq4zg5fjhcrb3"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; - flowBeads = derive2 { name="flowBeads"; version="1.28.0"; sha256="137pki1z0idd11kvlcgzjm6whi4qb29d211i450bp9fpw73x5ldg"; depends=[Biobase flowCore knitr rrcov xtable]; }; - flowBin = derive2 { name="flowBin"; version="1.26.0"; sha256="1awp9vnd7d95zkbm8pcrb6zmv98xdjjkjidmzjjc3v1kyasi2xqy"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; - flowCHIC = derive2 { name="flowCHIC"; version="1.24.0"; sha256="0pvscihas01p208p27zx3i74spmsv9c1jw2iawl9zj7fk2j1ikq3"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.28.1"; sha256="1298gzhq4wc092mvrfksp48dpn4b6sak61hmq3pn1zxrvi8ldrz5"; depends=[graph Rgraphviz SPARQL]; }; - flowClean = derive2 { name="flowClean"; version="1.28.0"; sha256="0rvlh6w7dyj8psc3v4kqhgn6z2kp750fj8w5fqy6nzadrjwid9dw"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.28.0"; sha256="1ml3y5wq68jbyr7l5j4zs79bj5bbwzmn5gx41yi88hq78iwkscrq"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; - flowCore = derive2 { name="flowCore"; version="2.2.0"; sha256="001ickrl2asdl0zwpdjqkl1w7137nzxbryamxihgya394jw73xr8"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp RcppArmadillo RProtoBufLib S4Vectors]; }; - flowCut = derive2 { name="flowCut"; version="1.0.0"; sha256="1hg76nnils8pcgrwp9nqvv8zgj078lzyc1241afzqijlbs1d85sp"; depends=[Cairo e1071 flowCore flowDensity]; }; - flowCyBar = derive2 { name="flowCyBar"; version="1.26.0"; sha256="1k3h4gsvmvsr37l1qvvln7nfb36vw46dbk5fmhc8jc06d43yqmlk"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.24.0"; sha256="09f2fydrq40ygdspynvvk7m3c94659xk1v455ngqmc90gwpzayfa"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; }; - flowFP = derive2 { name="flowFP"; version="1.48.0"; sha256="1v11zk21kdfvylzk1cdizz0aqbwdf5s2l636lr741jnm2ibc55ig"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowMap = derive2 { name="flowMap"; version="1.28.0"; sha256="0p364gwqqrsxkdlrszp5aq8n7hwjzc4lhflc7ck83fv0ws3w7pcq"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.26.0"; sha256="0ssl5k515srjjpi996khnmyziy702z8q15x066ivlkpmdqv7rc0g"; depends=[Biobase flowCore Rcpp]; }; - flowMeans = derive2 { name="flowMeans"; version="1.50.0"; sha256="02y5b3iqjlqjlxrqq0l24dr68sjaniz26jqf14cnnwz1xg5hz734"; depends=[Biobase feature flowCore rrcov]; }; - flowMerge = derive2 { name="flowMerge"; version="2.38.0"; sha256="0xb9n8y6v7mc8hvsjbwrx43hj3h89vkf646aqyrfidjkdl2bci0n"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.36.0"; sha256="1bx0pmm05jnp8r0cmqdkj8cvnn8x6q5jzf7pwvzid76lxj2pb8ig"; depends=[]; }; - flowPloidy = derive2 { name="flowPloidy"; version="1.16.0"; sha256="04a4z2llqsp3031kgiw550vz0id0v4jfrj2bxi5bgfx9jflswpn2"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; - flowPlots = derive2 { name="flowPlots"; version="1.38.0"; sha256="1p3zlqwfvcxiacjy5hp4ypj7hwzfswbwkvf7vkmzqd5ban0jwp1i"; depends=[]; }; - flowSpecs = derive2 { name="flowSpecs"; version="1.4.0"; sha256="0zjr5y3pa892ybf0zs3lcqxcvsgsvkp86fy9dlb53w24l84fnnm1"; depends=[Biobase BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; }; - flowSpy = derive2 { name="flowSpy"; version="1.4.0"; sha256="1kpndaj98gws89fifm7h809r59x1jprq0dm90bnk3z3k0gfvm2k7"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; - flowStats = derive2 { name="flowStats"; version="4.2.0"; sha256="1i6nrwc55k4bn4qprgs6npy7wf8537m429yncqsygsv47z21ix6x"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer rrcov]; }; - flowTime = derive2 { name="flowTime"; version="1.14.0"; sha256="1aay60king3ylbqx22kr7avsrcckb3qqx8rg4fsspa6mvdajnncg"; depends=[dplyr flowCore magrittr plyr rlang tibble]; }; - flowTrans = derive2 { name="flowTrans"; version="1.42.0"; sha256="0fiqgw9pf9gc88ghpg7dqj0l89f6cqrqaygbly7zi9ryxx00kyzm"; depends=[flowClust flowCore flowViz]; }; - flowUtils = derive2 { name="flowUtils"; version="1.54.0"; sha256="1q4g666nd51j24hcp2wxla1bdi77kbfd4i0pxgp7rs2jf7200k09"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; - flowVS = derive2 { name="flowVS"; version="1.22.4"; sha256="1w96hzaxa74kbybpz0pgz04napmgx997w9q5kjz8d0qb0893jzy2"; depends=[flowCore flowStats flowViz]; }; - flowViz = derive2 { name="flowViz"; version="1.54.0"; sha256="1s6jrn2a7hv984xvm6gyn8k3hnma8qidrw9kgj9z5128hv330z7k"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="4.2.0"; sha256="19svh32jq1dpq3ayhpd5r8bw0iax8d9kdvpvc23gx2pf16g1j5ag"; depends=[aws_s3 aws_signature BH Biobase BiocGenerics cytolib data_table digest dplyr flowCore ggplot2 graph lattice latticeExtra matrixStats ncdfFlow RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib scales XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.24.0"; sha256="10w9rhvdb0q8gm6lnwn137w89jaza4vd3y1fxph4ya8gqzxzi07h"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; - fmcsR = derive2 { name="fmcsR"; version="1.32.0"; sha256="1pqf3yp7v6qkdd3ja5kbzxnmb5sqcqjfmwx5sxj97lgnv9mwdv18"; depends=[BiocGenerics ChemmineR RUnit]; }; - fmrs = derive2 { name="fmrs"; version="1.0.0"; sha256="0pyxlld43jc2zk61k523vr40687bzpw45rd14qv05ar37lvaddrp"; depends=[survival]; }; - frenchFISH = derive2 { name="frenchFISH"; version="1.2.0"; sha256="1i89mf234dd9lzsizw6286111w0p3prsw7icrdr7lmrzcmacsrz0"; depends=[MCMCpack NHPoisson]; }; - frma = derive2 { name="frma"; version="1.42.0"; sha256="0dbv9gi8w1l1rlx1pzmrf7d63z9bhkcxx5j3fwzmq6iwji0ax2y7"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; - frmaTools = derive2 { name="frmaTools"; version="1.42.0"; sha256="0x3k4cnz322cncy9x622gjr24h8dwqq8fccn61yv3rwwpvcc0j50"; depends=[affy Biobase DBI preprocessCore]; }; - funtooNorm = derive2 { name="funtooNorm"; version="1.14.0"; sha256="1mibsxvsh52h70azwq219dsfsrcvqsdhm8hj4hysx65l3h4dpykx"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; - gCrisprTools = derive2 { name="gCrisprTools"; version="1.18.0"; sha256="0rwb0xa02wybblp2f7ncyrz46j8j6m83srn3p8bg4b1gxqgqddwq"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg SummarizedExperiment]; }; - gQTLBase = derive2 { name="gQTLBase"; version="1.21.1"; sha256="0nipibm1bk9k70ajbw1f6vjmz0dh7gk21l17q3m54bnawxsggrfh"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; - gQTLstats = derive2 { name="gQTLstats"; version="1.21.3"; sha256="1h78l23idf867djmdk97b02jxgmz4vfr2dai01fp648d0lsx5mkl"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; - gaga = derive2 { name="gaga"; version="2.36.0"; sha256="0hnnf4nd9cgxs6kpncl9gf8vl18i5azn9fvcfvz8k5l0vlgj62xj"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.40.2"; sha256="1bs0hx8sqiyl08dqn2zx31kbv5aci4xvrs71pplx2yxal3jf5178"; depends=[AnnotationDbi GO_db graph KEGGREST]; }; - gaggle = derive2 { name="gaggle"; version="1.58.0"; sha256="1q57ynviarp9v1d5w1gr32w6kzg838gjrrdvhcqz18ccciipqmxs"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.34.0"; sha256="0815j2mjrvvzpgy2addjvy1sajwny9dvh9b6smsjkwlvpxdci3xv"; depends=[]; }; - garfield = derive2 { name="garfield"; version="1.18.0"; sha256="145xw1crgw599338xp32v3gwdn4kasx1w2k8gzcyb019iq2bdv6s"; depends=[]; }; - gcapc = derive2 { name="gcapc"; version="1.14.0"; sha256="1n42jyvx5vnyn1613nmz52kdlrxzp1q6jvlq7m8v2acp9811l2lc"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; - gcatest = derive2 { name="gcatest"; version="1.20.0"; sha256="0506rn47kfx6xvhjx4bs3p99svlm1lj0443r3qdr84z57q3ds5w5"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.62.0"; sha256="1v1x13iwcv6c9x7r1iz2598rwlyzic67jbqcajg24ib6lcfn9f00"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.26.1"; sha256="0f5vn8h5fzzazcv92sgrf85hc4xkkizk2wwml9mzjd8ya2fkwg8n"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.30.0"; sha256="1ml2g1dgx195g3z14p9pp9vy8078wllww07g8grgfgdgv1x791sx"; depends=[Biobase e1071 EBarrays minet]; }; - gemini = derive2 { name="gemini"; version="1.4.0"; sha256="0k0zmnxqj3jm98i93ii86q650hmrd1mx510mj26632jqkni9wbqc"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; }; - genArise = derive2 { name="genArise"; version="1.66.0"; sha256="0jficc4wwwkn0p05kskk8a1k1jjdfkyq7lgwxkpg0xzxkivnq3pa"; depends=[locfit tkrplot xtable]; }; - genbankr = derive2 { name="genbankr"; version="1.18.0"; sha256="0rmvff7fdn0476j42wv4n4qvdjarp6z7ip9wi1z990az9rxsyf6k"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; - geneAttribution = derive2 { name="geneAttribution"; version="1.16.0"; sha256="04bk9msibbm1iin3afxvmp6zfy10zv1q9wi1h2a24w4713f5qwn4"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; - geneClassifiers = derive2 { name="geneClassifiers"; version="1.14.0"; sha256="1x2sz4zr24vzkrwzjd2zm7xkmvpvzzsiwz0rjilds2n7iaflfb0y"; depends=[Biobase BiocGenerics]; }; - geneRecommender = derive2 { name="geneRecommender"; version="1.62.0"; sha256="1f3m524vib28c54n3kg382bab60if5jn3if9sysmbhd9k72cgflq"; depends=[Biobase]; }; - geneRxCluster = derive2 { name="geneRxCluster"; version="1.26.0"; sha256="0rm5yaf351ls8nbapppsd46mrlm02gdd0ryvc8vq98cbd6jixskp"; depends=[GenomicRanges IRanges]; }; - geneXtendeR = derive2 { name="geneXtendeR"; version="1.16.0"; sha256="1l9780sdr4xbwckiik75dsf4xqvcdkdmy35xiwy7f4f1202f005y"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; - genefilter = derive2 { name="genefilter"; version="1.72.1"; sha256="1c6h3qnjvphs977qhv5vafvsb108r0q7xhaayly6qv6adqfn94rn"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; }; - genefu = derive2 { name="genefu"; version="2.22.1"; sha256="1x461xa5xchl4mv9lbr8lcp62swdzphg0ga12sss4c0jqb67zrfy"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; }; - geneplast = derive2 { name="geneplast"; version="1.16.0"; sha256="0dp2yg2jbiddpnbl8jmfas91n4mdbgip71v7lw68gbf4v6ig9n5d"; depends=[ape data_table igraph snow]; }; - geneplotter = derive2 { name="geneplotter"; version="1.68.0"; sha256="1f8nr60n1nig1gdy85wqdhpzxvp9r4chygxm8xpy882mdvfv6rqx"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; - genoCN = derive2 { name="genoCN"; version="1.42.0"; sha256="0jq7gmpm4ix5jdl11468cz33a42xlwxf5xxjbygfvg183gam0xx6"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.22.0"; sha256="1ana06irlpdgnmk8mb329nws9sm8n6max4qargf1xdcdf3rnk45g"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; - genomeIntervals = derive2 { name="genomeIntervals"; version="1.46.0"; sha256="0jxgrad5nd9p4nzsib8g1p0vb86p1zwqfbhr2q984cbphjwhd8rn"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; - genomes = derive2 { name="genomes"; version="3.20.0"; sha256="04gks6km624ayyw8cfnakcm3bpnkc583mnma3h7rq0hszw22g1z9"; depends=[curl readr]; }; - genoset = derive2 { name="genoset"; version="1.45.1"; sha256="01iir5dpvakknizprpbgv48bdbij6cj09qf45jpshv1nl75l1mpa"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.22.0"; sha256="12c4al49ka3mabwxs5rj043xwra556c9wanzqg2y52yhk0na7zlr"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - genphen = derive2 { name="genphen"; version="1.18.0"; sha256="0cfhxgayaylgznw544z2j4wr9s9j8i27irr1r2cgjj6083p6hnvg"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; }; - gep2pep = derive2 { name="gep2pep"; version="1.10.0"; sha256="13rq75y793bh9xwgr72jvr1q9bgl4bpbj02vc9rs4c9d55jr15lx"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; - gespeR = derive2 { name="gespeR"; version="1.22.0"; sha256="0ilahjwzv6fh0s36s4xwz5n2jhlzwdli6js07q5mk7xn50zfb3mr"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - getDEE2 = derive2 { name="getDEE2"; version="1.0.0"; sha256="0yxnxbr7698j3r8vvkyx408x693c532lk114vynbc7p5x34q4w2k"; depends=[htm2txt SummarizedExperiment]; }; - ggbio = derive2 { name="ggbio"; version="1.38.0"; sha256="0vabil4jzrlv01aibqjhdkvrv2bf2kkpsidrkjj06isqr5fz54lw"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.18.0"; sha256="0myjvhm9jjb9cih5nlka3f9zg5ncy8gy3krpdpa0618jdglvgr1m"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; }; - ggtree = derive2 { name="ggtree"; version="2.4.2"; sha256="1y3bqg5w81v4mlzjpvwvkichm5klh2jzs3yb7nniqczmys8mb7ak"; depends=[ape aplot dplyr ggplot2 magrittr purrr rlang rvcheck scales tidyr tidytree treeio]; }; - ggtreeExtra = derive2 { name="ggtreeExtra"; version="1.0.4"; sha256="1ivh2lwwnhys64f9l98fi1h2m3pm556fvacqjdj3laz2wpdnakix"; depends=[ggnewscale ggplot2 rlang]; }; - girafe = derive2 { name="girafe"; version="1.42.0"; sha256="0j8bcbxs31mxn3lzdwjv9a1an4ydfk47y7c0dhk8k1d1rfr6k95l"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - glmGamPoi = derive2 { name="glmGamPoi"; version="1.2.0"; sha256="0hj5k942anfbyhcrc7xgx824ppld1jb9r161bxal189xklxvh59s"; depends=[beachmat DelayedArray DelayedMatrixStats HDF5Array matrixStats Rcpp RcppArmadillo SummarizedExperiment]; }; - glmSparseNet = derive2 { name="glmSparseNet"; version="1.8.1"; sha256="09p4i2fcwn7wji7zmam0fv6bf3nvavy4lxhfch53wpwr06n4mdim"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; - globalSeq = derive2 { name="globalSeq"; version="1.18.0"; sha256="0zy2z6h9cnz7a9dhxdn77fw6qpafp4zsxmbs9348xzh868a21gc4"; depends=[]; }; - globaltest = derive2 { name="globaltest"; version="5.44.0"; sha256="1kmxwhblyklsgvi4gx0r93rji5z4xmf76dabvbm87kvq4x831pf7"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.32.0"; sha256="13p9dhyl7v71ac8j200y400rkylb787n9ahmgl9ir5dl4h7hwi9x"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - gmoviz = derive2 { name="gmoviz"; version="1.2.0"; sha256="1a7ffh12a4h91jzc0d15nplixnd1nsh9ms91m2nkbpmsmqip16qi"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; }; - goProfiles = derive2 { name="goProfiles"; version="1.52.0"; sha256="1dpa5kqyip8x920vr6vxbp22wydj96x5nzs99kh5y5jbdlch21b9"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; - goSTAG = derive2 { name="goSTAG"; version="1.14.2"; sha256="061jb5fnyxxz18mjz25b4lf75izknsv42s4dngzd94fd85npbwvm"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; - goTools = derive2 { name="goTools"; version="1.64.0"; sha256="0g3hrlpa7pswjxvn7b18pvzp0xvg0hgpav277zix5ix2lys00n6d"; depends=[AnnotationDbi GO_db]; }; - goseq = derive2 { name="goseq"; version="1.42.0"; sha256="18fs3m4kl3zahn42j20rjvxy83irscgqx0dvid7va4majvsib509"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; - gpart = derive2 { name="gpart"; version="1.8.0"; sha256="1ilrjypkh00n280rhg62v8g4msdz0i3ljxg4ggn1z2y9yy9472cc"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - gpls = derive2 { name="gpls"; version="1.62.0"; sha256="0zd5cdrpgk87fxqfxlady13k0kmvvbnwl8q2y84zypqwg6ra3x6b"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.34.0"; sha256="1jr9aqg0q47ijf75kjycfwk8vxi7dsaqc0z31aqrfv1zqak90sm0"; depends=[gptk]; }; - gpuMagic = derive2 { name="gpuMagic"; version="1.6.0"; sha256="0a08r223kci93ix7h8a01x6r419dd02768xcxs0k32127xm5bjqb"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; }; - gramm4R = derive2 { name="gramm4R"; version="1.4.0"; sha256="1030f49x3hnsr98kjn0m348379yica04qn8r955wid3llyig0dhd"; depends=[basicTrendline DelayedArray investr minerva phyloseq psych SummarizedExperiment]; }; - graper = derive2 { name="graper"; version="1.6.0"; sha256="074b9cz30ip5lr6s35a1k9ig2x0wa46l7l50dbnhd55d9k4sdzwc"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; }; - graph = derive2 { name="graph"; version="1.68.0"; sha256="0wr7j2pasvi3srvg9z3n034ljk8mldcixny6b3kmqbqm8dqy9py4"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.36.0"; sha256="1ihza8m397qfvr79fhghs2knmw862hwz2akysy39r8hndv6lc7wk"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.24.0"; sha256="08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; - gscreend = derive2 { name="gscreend"; version="1.4.0"; sha256="02rbw9akyxlccl11yzrfbl80qh49q2cksgbvbni125byrqzi6qlx"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; }; - gsean = derive2 { name="gsean"; version="1.10.1"; sha256="1k644gqvm0ijsm9gryrbji6wfd7lgbymlbvcjnvgzyyhajsp89hc"; depends=[fgsea PPInfer]; }; - gtrellis = derive2 { name="gtrellis"; version="1.22.0"; sha256="14mpavkxlp9d1kccwi4b9hi7x8md5j4s1g17ivqsj38lxqjvg5gw"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; - gwascat = derive2 { name="gwascat"; version="2.22.0"; sha256="1aqi1ny93virnzsxkh9ccx3mws70bgv0r8nwgla09vffb7f16nna"; depends=[AnnotationDbi BiocFileCache Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges readr S4Vectors snpStats VariantAnnotation]; }; - gwasurvivr = derive2 { name="gwasurvivr"; version="1.8.0"; sha256="1syvy64wwrbs2fifv6rdsnv5x7nvl2prgr2yd4dhv5yij62nb3l5"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.24.0"; sha256="0hmphbg2wfa0f4dks9jfs5mlvc3a5pw5nypn4zzy21ia5n80didl"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; }; - hapFabia = derive2 { name="hapFabia"; version="1.32.0"; sha256="0zaynpv7wgc0s6x5ryq255w23n56jqqps95fcxr3n9l5p1v3j1js"; depends=[Biobase fabia]; }; - heatmaps = derive2 { name="heatmaps"; version="1.14.0"; sha256="0rmgk6wvz29qj98hfibgnmds6nbpqxqg1b55ffxksm3m86grkkq1"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; - hiAnnotator = derive2 { name="hiAnnotator"; version="1.24.0"; sha256="10phidg6nf9yzbm0ny66ls3fh01hh8mjb9srcwwxdhirlkdql79w"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; - hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.26.0"; sha256="1fjja3lmq1dkb077gddgh9zdcf23fzhj81g20x10gwv7swpph996"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; }; - hierGWAS = derive2 { name="hierGWAS"; version="1.20.0"; sha256="0c44689s6zg045xxxz3jxb1r2xnqckc51kx1319r0m21k7rsz9z9"; depends=[fastcluster fmsb glmnet]; }; - hierinf = derive2 { name="hierinf"; version="1.8.0"; sha256="0j98b2vyax4hwyjdhm8a3asydrgh8af0gscxdbcr94f7pvx0frvy"; depends=[fmsb glmnet]; }; - hipathia = derive2 { name="hipathia"; version="2.6.0"; sha256="1ragg18k8zxzfpmpi1slgq9gvyvx6sq2n0zal8d8vrzpika07ig2"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; - hmdbQuery = derive2 { name="hmdbQuery"; version="1.10.1"; sha256="1mymfd4rxv05a5x88wyva2h65hv91lv38s189cwdx6b19hh4dp3y"; depends=[S4Vectors XML]; }; - hopach = derive2 { name="hopach"; version="2.50.0"; sha256="0imj3nw3afffhh44a5d29c58rn573qylifjc2sqvxzmfxjraqnqd"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.32.1"; sha256="0h10b0fyblpsnxj60rpbk99z7snrkkb5jssmf0v27s6d445jq2zr"; depends=[]; }; - hummingbird = derive2 { name="hummingbird"; version="1.0.3"; sha256="0qa9xqcp7crb7hbprj8b5hn5nsli8xsvxn50mnmqxv23ifhpv5y0"; depends=[GenomicRanges IRanges Rcpp SummarizedExperiment]; }; - hypeR = derive2 { name="hypeR"; version="1.6.0"; sha256="0dic9pnv5w5m77arjh0j125mfyjvg69cpwlhrc5k7xjm97blxb87"; depends=[dplyr ggforce ggplot2 htmltools httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable reshape2 rlang rmarkdown scales shiny stringr visNetwork]; }; - hyperdraw = derive2 { name="hyperdraw"; version="1.42.0"; sha256="0z3a3lpz7s0fw023fxldkgxvl2dl1wn8agnyj09sky11ainxdayz"; depends=[graph hypergraph Rgraphviz]; }; - hypergraph = derive2 { name="hypergraph"; version="1.62.0"; sha256="1p5mzr2aiqqc1j2inh45abjvqhid9jqv6wiym1xxnz16mpaa7q97"; depends=[graph]; }; - iASeq = derive2 { name="iASeq"; version="1.34.0"; sha256="001s7z5b4wfaisbypnjzw457gxqga7w007kh0r3vx70cbk4a95qw"; depends=[]; }; - iBBiG = derive2 { name="iBBiG"; version="1.34.1"; sha256="15af5531lv4d2vq865p5d1lf530qxckzbkp2wnjx9xyix4vbyc4j"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.30.0"; sha256="1lzc1jrb8rscw59bzfyywcv80h291a3ahh6psnsx6471clvxfhvf"; depends=[Biobase ggplot2]; }; - iCARE = derive2 { name="iCARE"; version="1.18.0"; sha256="1pp1q0dyvwz39qrnwj3wq5263mvilgrzaxgx65ak3py7jcw7bjdl"; depends=[gtools Hmisc plotrix]; }; - iCNV = derive2 { name="iCNV"; version="1.10.0"; sha256="1dm5p4h479njf5pm1kkwk3cyg3x1h0kr70z9c7qnsjn0hm9gm1rr"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; - iCOBRA = derive2 { name="iCOBRA"; version="1.18.1"; sha256="183asczy9v2v1vrzxb7n7pa2yfzym3l24r3737k0jg6hnp2bpw50"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; - iCheck = derive2 { name="iCheck"; version="1.20.0"; sha256="1n883jksmwmvjjhwq7033p602fqfg6ggkbd0wr3417rnw865pjxs"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; - iChip = derive2 { name="iChip"; version="1.44.0"; sha256="13pjcc56hkgl9bd8qxhd8xbp5hirpkjwvi11f10wmmq50zpmw5ln"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.26.0"; sha256="02ji84dsbn4wir8sim4qy8h57524mnrsq51wxc7n8ybp5x7n9k9q"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.20.0"; sha256="0srf96yp3jp6p19a30kk8rbndgbxnar1skl5ssav3q94dk636gzm"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.34.0"; sha256="0lkqx26qs02fks9xvb3xll3qg6sk0kbhbqqpzprqdm76a2i4pxab"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSEE = derive2 { name="iSEE"; version="2.2.4"; sha256="04q13y3xbm0lz83apwfz2c54r91lfx69p722yw07p4hc9a1l6crh"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 ggrepel igraph mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; - iSEEu = derive2 { name="iSEEu"; version="1.2.0"; sha256="1zprp7bkas2faraz44djjp8frg2v3gpcaxmw2zk3m1zfllar0dkg"; depends=[colourpicker DT ggplot2 iSEE S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; - iSeq = derive2 { name="iSeq"; version="1.42.0"; sha256="1553in9g15vycp4a50kgzs9m3zqi7ba6mjq1b32j5mzavmkb5hdn"; depends=[]; }; - iasva = derive2 { name="iasva"; version="1.8.0"; sha256="04g4nlznxfmqjnwywa3dxhii7hj1np8ck3j476kw1ac3lc78f8wj"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; - ibh = derive2 { name="ibh"; version="1.38.0"; sha256="1cpa60kkbj910fjn8fnchxkmaqa77475ayklvxapc82lfvjgx6n0"; depends=[simpIntLists]; }; - icetea = derive2 { name="icetea"; version="1.8.0"; sha256="14m5r6yffsryji17lyhh47217i2f3ii68bqkv6w25frxg1ny72ym"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; - ideal = derive2 { name="ideal"; version="1.14.0"; sha256="0x827s5p7rziynxkmq39h4hbk88wfjavjnjcysdwd9fy26yxja49"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; - idiogram = derive2 { name="idiogram"; version="1.66.0"; sha256="0lwsjfmfgxlm1xg1a1wgcbahrr6wxl7lcfz8cf7rf3d6jxibjwp9"; depends=[annotate Biobase plotrix]; }; - idpr = derive2 { name="idpr"; version="1.0.007"; sha256="0m2lqzj7n597gpm7f59yjphvpazbxblrcs5xzgs0qd64155rsa8h"; depends=[Biostrings dplyr ggplot2 jsonlite magrittr plyr rlang]; }; - idr2d = derive2 { name="idr2d"; version="1.4.0"; sha256="03ha7lqkj2l0094pi1bakiwkckf5b5hd56ds1vsmjjyfmcg7gj1y"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; }; - igvR = derive2 { name="igvR"; version="1.10.0"; sha256="1c0bfv5q48g7130l8dvq2l04h6xh6wayaygj07c9kyc6s4y47iwg"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb RColorBrewer rtracklayer seqLogo VariantAnnotation]; }; - illuminaio = derive2 { name="illuminaio"; version="0.32.0"; sha256="1yqm2fqw5ka7qywbal3p7axlwm1r0wibsr33n5xjma1dl9pi8fay"; depends=[base64]; }; - imageHTS = derive2 { name="imageHTS"; version="1.40.0"; sha256="0rcvkn4iam347nfqzw9bjxdbl4jvma18kpp46iwpfyagkdwv4jkv"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.22.0"; sha256="0274gffghcfhmbqfnmlrib5lg58lzzrvchv4hlw1wj08yy0wr0x5"; depends=[flowCore lattice]; }; - impute = derive2 { name="impute"; version="1.64.0"; sha256="1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"; depends=[]; }; - infercnv = derive2 { name="infercnv"; version="1.6.0"; sha256="0m3fflxnxm0krvfknajijnsf685wl565m51wdxyq2n6ps0mwkqf4"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov Matrix RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; }; - infinityFlow = derive2 { name="infinityFlow"; version="1.0.0"; sha256="1j3cadvcdjh1wgjj4da60szvy67sx67c456v7c23m8vv4jjrk521"; depends=[Biobase flowCore generics gtools matlab pbapply png raster uwot xgboost]; }; - intansv = derive2 { name="intansv"; version="1.30.0"; sha256="1jf4y53ay3dd36v43vr9w1jsifjz26qi7s124p0j431dqq23nm73"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.28.0"; sha256="0dq7z53fcknm4kf4ixm1h17f9l0iyz8ana491n6l6kr625gc7771"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.28.0"; sha256="08id2hkx4ssxj34dildx00a4j3z0nv171b7b0wl6xjks7wk6lv01"; depends=[BiocGenerics DT shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.38.0"; sha256="04n756l7crplnnb0q13n3l5aa8bgjbsfi62gabm6f5ssv919zmf2"; depends=[haplo_stats]; }; - ipdDb = derive2 { name="ipdDb"; version="1.8.0"; sha256="1ns5ibl42pcpnfwaml3xbfxsfpfjggrpb804nvs1lr8fin5a3011"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; - isobar = derive2 { name="isobar"; version="1.36.0"; sha256="13jzd6d1s3y5bsgw9ln8vzig8jycbb8mrhjvp0gaccrnmdppdv0b"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; - isomiRs = derive2 { name="isomiRs"; version="1.18.1"; sha256="0x890d34fmqvnjvrp7i8vhc2a4r10k7c6jbqadv55nnmmsg02dnc"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; }; - iterClust = derive2 { name="iterClust"; version="1.12.0"; sha256="0w7zy1zjrkpcd4l8ppw1kl1k46krchgllns3p4lv7c1nnsigmvvx"; depends=[Biobase cluster]; }; - iterativeBMA = derive2 { name="iterativeBMA"; version="1.48.0"; sha256="1kxsjz7y7rz8l2dzbx0laiqxk8426v6jn8hsqs961zbsdkinwfam"; depends=[Biobase BMA leaps]; }; - iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.48.0"; sha256="02bmmgr19zydgfdjzi8yy4vydhyg3ashws6zk595pl8c7yzxwx7x"; depends=[BMA leaps survival]; }; - iteremoval = derive2 { name="iteremoval"; version="1.10.0"; sha256="0264hiph3b9sqi46gikv16lkssiignb87pb955mqyrjrfn3yic57"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; - ivygapSE = derive2 { name="ivygapSE"; version="1.12.0"; sha256="073a2vis058gk5kjmgnxzcwsm7hjqddplzz6zi15jijvb44f8ffa"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; - karyoploteR = derive2 { name="karyoploteR"; version="1.16.0"; sha256="1agw49mckm3g33igqdp9lr8a4ky8nhivaxrs7d00dvzk0diqwdb2"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - kebabs = derive2 { name="kebabs"; version="1.24.0"; sha256="1jx2j92wpnacf2ck2p4nb66vm925rj35bwjb8gayiwqwy3k5jr1y"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; - keggorthology = derive2 { name="keggorthology"; version="2.42.0"; sha256="09px6qv367q6ak1g0dyyybp5hm2xyi6ca81iyrsx086rsi1lq1ns"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; - kissDE = derive2 { name="kissDE"; version="1.10.0"; sha256="0vzn5p3fa9xgvn88h5940w7n04h925jxsp664madib30p0an2mvz"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; - lapmix = derive2 { name="lapmix"; version="1.56.0"; sha256="04i13smb47a0pk8a6d4j86lz0pypbb7yvqi77rh5gz7b8kv1i3i2"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.20.0"; sha256="09i3ikv0axks9g842z1pjsc8x0fba51zyyc218h0bylbi1n9cdkm"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; }; - lefser = derive2 { name="lefser"; version="1.0.0"; sha256="1pgh052grqc8yq2hkwrqikw99j8fb84p34i9806wxmfifn4cyks5"; depends=[coin ggplot2 MASS SummarizedExperiment]; }; - les = derive2 { name="les"; version="1.40.0"; sha256="0hriv16ig3r37mbs4hnc55ahhfzd47rh6cak6w8yq6w5h82kknrx"; depends=[boot fdrtool gplots RColorBrewer]; }; - levi = derive2 { name="levi"; version="1.8.0"; sha256="1ak8mhb38b82szb2pizffsl8wacxwgp68n2lcwl92r5n125jnbbh"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; - lfa = derive2 { name="lfa"; version="1.20.0"; sha256="0p72xz7sixinl48ijxx7z9n48h0r4zb7kdb3jp9z2k1v20z5cbpd"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.46.0"; sha256="1xxv493q1kip9bjfv7v7k5dnq7hz7gvl80i983v4mvwavhgnbxfz"; depends=[]; }; - limmaGUI = derive2 { name="limmaGUI"; version="1.66.0"; sha256="00bkd7j0ld6vmzaz08wv7s37j98ywbc1xlr14d276j7rbdsgi43w"; depends=[limma R2HTML tkrplot xtable]; }; - lionessR = derive2 { name="lionessR"; version="1.4.0"; sha256="1q8yj7svjrzksmqm1p2dkas2rcvy768djwpiq60y2p3gwjgx2p57"; depends=[S4Vectors SummarizedExperiment]; }; - lipidr = derive2 { name="lipidr"; version="2.4.0"; sha256="1m72kddill42kbd3h76rwasg6dkm8m2xh59mcnycxpyvlgn1d19g"; depends=[data_table dplyr fgsea forcats ggplot2 imputeLCMD limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; }; - lmdme = derive2 { name="lmdme"; version="1.32.0"; sha256="0nhjqlzlqxz9bgw3ssrkily3ckjxg3bmyhh4d1wi27k225rh4zl3"; depends=[limma pls stemHypoxia]; }; - loci2path = derive2 { name="loci2path"; version="1.10.0"; sha256="086rl1wgd7lwpzv3q3b96nc5ka4hnxys0qpfp8na4kla8xalaq9s"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; - logicFS = derive2 { name="logicFS"; version="2.10.0"; sha256="0hnmwg7x5s5nb38vicpm3fz9c9gk17r5s0r8h4xx9m78r8p1c6gc"; depends=[LogicReg mcbiopi survival]; }; - logitT = derive2 { name="logitT"; version="1.48.0"; sha256="0jvxq26pc91mnql1zafqifckn6sycdnhanp66xjsi25dxkz730bs"; depends=[affy]; }; - lpNet = derive2 { name="lpNet"; version="2.22.0"; sha256="197769b6jd512s135nmrgg2z4a441l48i36zgnvg3031cwy3pnws"; depends=[lpSolve]; }; - lpsymphony = derive2 { name="lpsymphony"; version="1.18.0"; sha256="0f9qjfv7rp1y3mwscnjz3pph7m40zgz55xcdhyii6k1iw2vyaxx9"; depends=[]; }; - lumi = derive2 { name="lumi"; version="2.42.0"; sha256="19asap8vhm3g8hyvpr8l7mw071dsa1d95wx46lh8m6achffngqv3"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; - mAPKL = derive2 { name="mAPKL"; version="1.20.0"; sha256="09i7hli37rdgv08dink458bwbij1fkab996dndkci4ijc318mfxd"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; - mBPCR = derive2 { name="mBPCR"; version="1.44.0"; sha256="06m6d6j0aiiiz6l8zkys38lbicki67agh8b3vha7lhff31qw6axz"; depends=[Biobase GWASTools oligoClasses]; }; - mCSEA = derive2 { name="mCSEA"; version="1.10.0"; sha256="0mpy365cf7pv2aap455yhb3hgp7qq5d8l3xg6lalqihxhhfdgrjr"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; - maCorrPlot = derive2 { name="maCorrPlot"; version="1.60.0"; sha256="1wn62fggf31kpirkh4m38s6h751r3p8b26zsfh9kiii5myypic06"; depends=[lattice]; }; - maPredictDSC = derive2 { name="maPredictDSC"; version="1.28.0"; sha256="1fp73j2dinlpjhm03zjp85mnn0y425gr7fv0r713i0nzr5xgjfqz"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; - maSigPro = derive2 { name="maSigPro"; version="1.62.0"; sha256="1v7lp2hibg0mf5yn89k2wb1via8zbc33l6mzmfvfb78gc0b4n0nh"; depends=[Biobase MASS mclust venn]; }; - maanova = derive2 { name="maanova"; version="1.60.0"; sha256="11npi2vi4rs6g4zsws9p94s1racywxczmvaiyqslwqmqp7i1iqxm"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.64.0"; sha256="0bg9bryrrd1bhlhsax736js0xix39q6cabkdsgvjg6wns0l5j54j"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.64.0"; sha256="1lrxdm1b5a63iq4yif2rmp5jkw722fvqvgkqfw8miwlgi7zdb9j4"; depends=[ade4 Biobase gplots RColorBrewer scatterplot3d SummarizedExperiment]; }; - maftools = derive2 { name="maftools"; version="2.6.05"; sha256="0iqqmc8apmjkb91s0vnfxq6jcwipl1pvjlplzfzq5c52ybbjamlw"; depends=[data_table RColorBrewer survival]; }; - maigesPack = derive2 { name="maigesPack"; version="1.54.0"; sha256="1sfy9mq3ajbcbg0gqn5mj0jad3ajilpyfhapij8vs5nxq4slaxhg"; depends=[convert graph limma marray]; }; - makecdfenv = derive2 { name="makecdfenv"; version="1.66.0"; sha256="1kgrk07hkg67ppaw7dwzlrbhgs0i1zmy72pxmryw795xd1ca4lv3"; depends=[affy affyio Biobase zlibbioc]; }; - mapscape = derive2 { name="mapscape"; version="1.14.0"; sha256="1a65ww71mwz7njlf79a3grpa0185b4v0si7x1p9w4ygcdvw2xrpp"; depends=[base64enc htmlwidgets jsonlite stringr]; }; - marr = derive2 { name="marr"; version="1.00.03"; sha256="0vqqi27sbgjxhg1yrrkm1di58cvnlnjwp66ds5cad8f01523ijr0"; depends=[dplyr ggplot2 magrittr Rcpp rlang S4Vectors SummarizedExperiment]; }; - marray = derive2 { name="marray"; version="1.68.0"; sha256="1kkgv166gzvlj8p58vzam3hcaz8mypi3hhpdsjhaszwg6nav4ray"; depends=[limma]; }; - martini = derive2 { name="martini"; version="1.10.0"; sha256="1lf7bpqf3af1anfdl3l280wpscc4cj9nbppyj3j15r0dcn019rh5"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; - maser = derive2 { name="maser"; version="1.8.0"; sha256="0c65f5szhifnhspi7grrvmimbyqmq0n8mjb3ghhafjxbnsgai1rk"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; - maskBAD = derive2 { name="maskBAD"; version="1.34.0"; sha256="10pd8v4j2fqa5isa0brn0vp8b7w3z2rvxggzhl0myhz4p5f13s9a"; depends=[affy gcrma]; }; - massiR = derive2 { name="massiR"; version="1.26.0"; sha256="18jyqjynak42rqy5hg6i3fd6v22jfv3n290cd13jnw8dnfcys9sf"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.32.0"; sha256="0bsbfqqgk83ijjkiy3rr35rh72iqgdpky79grqwlskx8y5194iy9"; depends=[]; }; - matter = derive2 { name="matter"; version="1.16.0"; sha256="07mdvgmxncdic5r4w5wp7l9fbby4xjq75kbagf9iy0aqcai78sjx"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; }; - mbkmeans = derive2 { name="mbkmeans"; version="1.6.1"; sha256="0rc83mh9xzwczfn88j0xah86ldzi1kdfqgd938nj57ifx3zci4xh"; depends=[beachmat benchmarkme BiocParallel bluster ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment]; }; - mcaGUI = derive2 { name="mcaGUI"; version="1.37.0"; sha256="08wqgaza58xh8b6zygdyjlp9g2lp0raf18hga7jyh9sjyp2hffq3"; depends=[bpca foreign lattice MASS OTUbase proto vegan]; }; - mdgsa = derive2 { name="mdgsa"; version="1.22.0"; sha256="1wdvyz0k9basd5ns9bkac38hd23nx6qrppw3vk7k5vlv82pmhdzj"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; - mdp = derive2 { name="mdp"; version="1.10.0"; sha256="122w6139ykhavxnckgvwmabm3cay429vnhjszb5qvd7xjskzm8zc"; depends=[ggplot2 gridExtra]; }; - mdqc = derive2 { name="mdqc"; version="1.52.0"; sha256="1c30d84xgizw9k91wdyd9b79jacvv8wi2fxm51qr29ggk0lax07x"; depends=[cluster MASS]; }; - megadepth = derive2 { name="megadepth"; version="1.0.3"; sha256="1mdg2c6cdfr8n3hxw44vmdpp4zhs77mw3kj6rahadmbrg2qhkm21"; depends=[cmdfun fs GenomicRanges readr xfun]; }; - meshes = derive2 { name="meshes"; version="1.16.0"; sha256="1xqp4mll566p7jaxbc7rqirw700hfgfvsdvkv0d6d201ngvaql4j"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; - meshr = derive2 { name="meshr"; version="1.26.0"; sha256="0ip1xlmak344f4sxxiarfvypib465zmzc3axl3672g1x5q6ghm9z"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; - messina = derive2 { name="messina"; version="1.26.0"; sha256="1q8kka7a9mycamcp8k0zf6mgh3y7aqb055w601gg92qm7h27bf84"; depends=[foreach ggplot2 plyr Rcpp survival]; }; - metaCCA = derive2 { name="metaCCA"; version="1.18.0"; sha256="1if8wqxvhc9kqrnx00pn69fsp1wswi9p20d61ngkyzd0csnvaslc"; depends=[]; }; - metaMS = derive2 { name="metaMS"; version="1.26.0"; sha256="01bzbrfy57pbhqxx4zsdrzwzpq29w0k7pvww8c7ffgds5gfpqn64"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; - metaSeq = derive2 { name="metaSeq"; version="1.30.0"; sha256="00s7c7mykvxib8j6v9zw53zcb8hxg1qqnd5gkiaq1s56hwyzf8sf"; depends=[NOISeq Rcpp snow]; }; - metabCombiner = derive2 { name="metabCombiner"; version="1.0.1"; sha256="1zy14xq3spk9s5zvsgkx8nllkiiklgn57dvvr0k0v153ash99v2r"; depends=[caret dplyr matrixStats mgcv rlang S4Vectors]; }; - metabolomicsWorkbenchR = derive2 { name="metabolomicsWorkbenchR"; version="1.0.0"; sha256="0iygahq0nv9klm2f1wwfszhjg21x0360l05whzkgsxkq2hkpvl25"; depends=[data_table httr jsonlite MultiAssayExperiment struct SummarizedExperiment]; }; - metabomxtr = derive2 { name="metabomxtr"; version="1.24.0"; sha256="1n64mqjlb0awakzdbgi2nl7miar4shnh7jgpkpka7rcxa6r9j88s"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.22.0"; sha256="1w4jgkp8sbc6digi1paynzcan89q15jwvcsr015i53ls712dbc3d"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; - metagene2 = derive2 { name="metagene2"; version="1.6.1"; sha256="09m7w6r5689121njzqvfci4yzrrjl0hzmjz27926fly9m7znmfi8"; depends=[BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; }; - metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.10.0"; sha256="1mm96910idw3y0bcq8a7s0q40ar0l2l10jdz5al8ws9b899mw078"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr RSQLite S4Vectors stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.32.0"; sha256="1wrn8bmf7a00zfdi6n4dhdf7qy05023jcwrcf9j3f0nkkk8p0snx"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; }; - metahdep = derive2 { name="metahdep"; version="1.48.0"; sha256="1frsibj5zzg7g35nxmrqvpxvniyss9155xrvjdb54zbzzvc3hbkf"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.30.0"; sha256="0p566nbwhq4k41yqnb94mgyhcsf4cd1mdqc3fpfsafivzdmmdi3v"; depends=[baySeq biomaRt brew corrplot EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; - metaseqR2 = derive2 { name="metaseqR2"; version="1.2.0"; sha256="1kkyn2p16rw83gz1rxldrdyrz2xbbn1w1809bnkyhfzv2czfx276"; depends=[ABSSeq baySeq Biobase BiocGenerics BiocParallel biomaRt Biostrings corrplot DESeq2 DSS DT EDASeq edgeR genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots harmonicmeanp heatmaply htmltools httr IRanges jsonlite lattice limma locfit log4r magrittr MASS Matrix NBPSeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp VennDiagram vsn yaml zoo]; }; - metavizr = derive2 { name="metavizr"; version="1.14.0"; sha256="1rffsyx2ybnqyy1n050qf8pycs7241qzi4qayv91jl4nfy01yry3"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; - methInheritSim = derive2 { name="methInheritSim"; version="1.12.0"; sha256="1r256c724qsp9cpz91jp0n1yys2m33z053zqrdrrcj55d9fgy10a"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; - methimpute = derive2 { name="methimpute"; version="1.12.0"; sha256="1pi1py9c1v3j092lnhxqw7l8m8gk24rrdpdipd4qs32r40q004g1"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; - methrix = derive2 { name="methrix"; version="1.4.07"; sha256="1pc2blyk6bp2sawnsrhq0zg8xws40symnlycxif451jrs00bh47f"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array IRanges matrixStats rtracklayer SummarizedExperiment]; }; - methyAnalysis = derive2 { name="methyAnalysis"; version="1.32.0"; sha256="0vcri6aw2h14bd4cjwxy3wcw03fa8mgyl4gfxfbd32mf5pajag73"; depends=[annotate AnnotationDbi bigmemoryExtras Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; - methylCC = derive2 { name="methylCC"; version="1.4.0"; sha256="0m5sx3y9dlna8zj0b7y7k2c5nf6fljlvlr8qazv65s9kls7r7fpq"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; }; - methylGSA = derive2 { name="methylGSA"; version="1.8.0"; sha256="03r9v1pms48gsz5xvv5swdklqwpfm3zd41xrfnsr2z9im6pa5zjx"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; }; - methylInheritance = derive2 { name="methylInheritance"; version="1.14.0"; sha256="1yvzkyf786sr66cmmi1ppiic6423dqan9s7dj1lkylh70ppdrzj2"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; - methylKit = derive2 { name="methylKit"; version="1.16.1"; sha256="1c9b11gfh3cc37iwym9rgsba3mh2xkp78a1gvnjqhzlkiz667mn3"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; - methylMnM = derive2 { name="methylMnM"; version="1.28.0"; sha256="0lw42glifhgmk34ai1mny0kkjjspgzwgcrvra71cmmla8q9958yf"; depends=[edgeR statmod]; }; - methylPipe = derive2 { name="methylPipe"; version="1.24.0"; sha256="1gvr816lng10ypg5rg2gb9a76hiymmpqlpnwg5jalzwdqr9h0ys3"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; - methylSig = derive2 { name="methylSig"; version="1.2.0"; sha256="023wk4n3ibyk5lrypq1msk48r4kpqp774w0xpvdbpff90gr75na6"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; - methylumi = derive2 { name="methylumi"; version="2.36.0"; sha256="00w5affxzirf6ffiznk33papwwvwsk2zgy6xvsx7iaf5kvnak2nh"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - methyvim = derive2 { name="methyvim"; version="1.11.0"; sha256="0p80il20cqybalrbp34ryzys5avcsnfg1sgz91wpmfkmkcwj88bf"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; - mfa = derive2 { name="mfa"; version="1.12.0"; sha256="0rvyqh9rnhlxhsh7sq6mx6ppjk0d19kvx3azsfs1qpgnb0vvdyab"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; - mgsa = derive2 { name="mgsa"; version="1.38.0"; sha256="1gi8rbgq95wgxpg0wyh7v74nni8fm10mc3y7f978203bj8slh7l0"; depends=[gplots]; }; - miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.14.0"; sha256="0n6mi1ksq72g6zjaxiis59qj0j8hbn98lcilhfr4ak1jyv9wjp7y"; depends=[]; }; - miRLAB = derive2 { name="miRLAB"; version="1.20.0"; sha256="095cq4555jgs8ngwfpjhni0khaaspgd8vnafy5sif876ff454d06"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl stringr SummarizedExperiment TCGAbiolinks]; }; - miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.18.0"; sha256="0i7b1g8hfbv22nzlhazc3l9hwknr439ljppqpab3464r9nqv0h7j"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; - miRNApath = derive2 { name="miRNApath"; version="1.50.0"; sha256="11b4rdg5pva0wcv18gmv2r8af8p26yvzs6fpl35lycmfra7982fh"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.24.0"; sha256="0335qmcr016jky6n8rn5wzf3zw5yr6fibfk250cps12kqc5zz9ac"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRSM = derive2 { name="miRSM"; version="1.8.4"; sha256="14diqd7akv7a2l9ixr3vg4xpfpan3ffd21bxqf6fdaf59ak3142a"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; }; - miRcomp = derive2 { name="miRcomp"; version="1.20.0"; sha256="1hdadldl0kj5fhz5r6was8sx9snqfld4yca8r9aqzj0gzgq7didg"; depends=[Biobase KernSmooth miRcompData]; }; - miRmine = derive2 { name="miRmine"; version="1.12.0"; sha256="0izjw5qimf1avfv1lacghvxr62xmnq12g01x8bg0886gw389d68i"; depends=[SummarizedExperiment]; }; - miRspongeR = derive2 { name="miRspongeR"; version="1.16.2"; sha256="0x7ws1z5sgg3xchm80k05ah9pzmgx8b74lh4ylpgnb6lbjlkhvk7"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; - microRNA = derive2 { name="microRNA"; version="1.48.0"; sha256="1nspsy9snabvsw0w0ssl6qawghnnff5924yvvgj9mrqkpkx9jd55"; depends=[Biostrings]; }; - microbiome = derive2 { name="microbiome"; version="1.12.0"; sha256="1w4ymbawdmqm1icfk9zvbgsnp5rr9h9p3x10p0ymipngw043hr3x"; depends=[dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; }; - microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.4.0"; sha256="0z5y12p6ff6i137cynd1188yrp4v6rq7b2vd82059awijji925a2"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; }; - microbiomeExplorer = derive2 { name="microbiomeExplorer"; version="1.0.1"; sha256="1x39gm9a6lsazsxwyd7aizg0qknsvd4mpim6pasyahnclkqcsksv"; depends=[Biobase biomformat broom car DESeq2 dplyr DT forcats heatmaply knitr limma lubridate magrittr matrixStats metagenomeSeq plotly RColorBrewer readr reshape2 rlang rmarkdown shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr tibble tidyr vegan]; }; - mimager = derive2 { name="mimager"; version="1.14.0"; sha256="198abvha081v20xggwvvscmpwgpzbj55x7fvxhxqx103zmblbqcs"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; - minet = derive2 { name="minet"; version="3.48.0"; sha256="1mg9zkp26k9yxcl8bljib3s7fl2kzi8qyyh7pyfl6zixl8d05ayd"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.36.0"; sha256="1x3ksp6syl54hds7wgm4p9yj4mznhhhhk20ijn3i2jc3k8xqcqfi"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; - mirIntegrator = derive2 { name="mirIntegrator"; version="1.20.0"; sha256="07f47ynjv8psh9i17h23j09611cd6wj585mkhd1vf77f7np0islm"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.24.0"; sha256="0ddnygmhli30l8vbxj9g4q4dn2igcs9zcwl9ngq63n034n53wi75"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; }; - missRows = derive2 { name="missRows"; version="1.10.0"; sha256="1q3jn21aim4l9hcsq9wn64p7dxd0ankcnjyava8gm2s3zkv268zc"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; - mitch = derive2 { name="mitch"; version="1.2.2"; sha256="0dqa3fkmh07gdaijfgg2rgrvr83iyr6k1vfyxn0wbdmza3k553vi"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra knitr MASS plyr reshape2 rmarkdown]; }; - mixOmics = derive2 { name="mixOmics"; version="6.14.1"; sha256="07d1z33bc3bym1jwp1qqfhs18w4v9axk0ycnmldmj6piswvp44wk"; depends=[BiocParallel corpcor dplyr ellipse ggplot2 ggrepel gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; - mnem = derive2 { name="mnem"; version="1.6.5"; sha256="1vbsqzdlqnbs6091537gcp7v3kra4lk8gcwf1fy8w3m6kvb07bpd"; depends=[cluster data_table e1071 flexclust graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne]; }; - mogsa = derive2 { name="mogsa"; version="1.24.0"; sha256="0rngax9rrwr7b9xqbpi5b982q1p68rnl2pyc39jwjnagpbf1yak7"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="2.18.0"; sha256="1k3hwi9aspjy75arigg7i1w7ygf112y12cndibf2bhpz2phzwslx"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; - mosaics = derive2 { name="mosaics"; version="2.28.0"; sha256="06z2dslp2vp9dc30nk0b28fiq17g7ws7q8ri4r2f6f5rgmjj199q"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; - motifStack = derive2 { name="motifStack"; version="1.34.0"; sha256="1psqpdbgbad31bd8hg5bl62qi5s9rl75nzm85igfpxar3zwwxjlb"; depends=[ade4 Biostrings ggplot2 htmlwidgets XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="2.4.0"; sha256="0nni6i7h51kz0ch8ls9c9jzd7fjmc9wsavp11hx6w6bmhnh3k4n7"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; }; - motifcounter = derive2 { name="motifcounter"; version="1.14.0"; sha256="0rizspp50wzwbr3ds8vfaxbv3lxkjp3v4p5r7ka9bjfg1g36hkwj"; depends=[Biostrings]; }; - motifmatchr = derive2 { name="motifmatchr"; version="1.12.0"; sha256="0zrpn0hqdg0hm80ydkfpiqncwyb8y0xp6mlin7g955p8zcpcm67z"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; - mpra = derive2 { name="mpra"; version="1.12.1"; sha256="08fiyzf7l9859mvd9y2gixhq4xds6gddpfsw1v7knb9dlvad92wy"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; - msImpute = derive2 { name="msImpute"; version="1.0.0"; sha256="17kdr0k750w93appcxmxd2864znp5zkk07di9w57vf0zq56mqxb7"; depends=[data_table FNN limma matrixStats mvtnorm pdist rdetools reticulate scran softImpute]; }; - msPurity = derive2 { name="msPurity"; version="1.16.2"; sha256="1ypcbpda2na186bxs5l15v6jc12x1kn382aad9s10270hnvfi3xg"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 jsonlite magrittr mzR plyr Rcpp reshape2 RSQLite stringr uuid]; }; - msa = derive2 { name="msa"; version="1.22.0"; sha256="0d29gia3b453q9v30hxr1s57j28cig8pp81syxc07ycn2rqg020d"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; - msgbsR = derive2 { name="msgbsR"; version="1.14.0"; sha256="00w8isy6sx8knjzk8rz4qlfd5xw8mw38ylj8sa67xc7g83va7br8"; depends=[BSgenome edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; - msmsEDA = derive2 { name="msmsEDA"; version="1.28.0"; sha256="1llmy8msxmrqik3s3439wffma1662vwvvcaz8q0a4g5ridkmdbrx"; depends=[gplots MASS MSnbase RColorBrewer]; }; - msmsTests = derive2 { name="msmsTests"; version="1.28.0"; sha256="1zsnmzj1qvjdwz7mwg9wrsk5iskpqs0f6jccqn8mxy9dgkskmp0j"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiClust = derive2 { name="multiClust"; version="1.20.0"; sha256="0q10z7v1dy3swcc3nfi6lw5z3730fpy7drjgy1v7r26wwl852kws"; depends=[amap cluster ctc dendextend mclust survival]; }; - multiGSEA = derive2 { name="multiGSEA"; version="1.0.2"; sha256="0kff4b71qw1zz80wg5f9w3lcs7z8cjax9w2bd2848q2mqi15pvdf"; depends=[AnnotationDbi dplyr fgsea graphite magrittr metap rappdirs rlang]; }; - multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.8.0"; sha256="0bgd6xmzbw8dbpj6a2f83cynl8lg8cki7v1vp7rx089x79x35vvy"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; - multiMiR = derive2 { name="multiMiR"; version="1.12.0"; sha256="06i77z13ss9sp1l7lww8j3n586kp69rlj6q8yyb29ajjin099y5i"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; - multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.14.0"; sha256="0d7c6db2fhhh1r6lkj3fprvvl3dkzvmbw49qx5djmsp7lzcy13bv"; depends=[doParallel foreach SummarizedExperiment]; }; - multicrispr = derive2 { name="multicrispr"; version="1.0.0"; sha256="0h3y3fiqrc6bvg2826ys6mcdc2ni0z9b90yh60j0f6yj8cmvqmj9"; depends=[assertive BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; }; - multiscan = derive2 { name="multiscan"; version="1.50.0"; sha256="1zci3xy3m4jzlvznx8vly2pz0ji17iwa2r1d935c8l6zrkj5n175"; depends=[Biobase]; }; - multtest = derive2 { name="multtest"; version="2.46.0"; sha256="06vixd81nh3nxrc6km73p7c4bwln1zm39fa9gp7gj272vsxkx53q"; depends=[Biobase BiocGenerics MASS survival]; }; - muscat = derive2 { name="muscat"; version="1.4.0"; sha256="1gsj15pqvnpkhw38yiaq9ffn7i27fzayml2n74ccaxs9c78na6w7"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform SingleCellExperiment SummarizedExperiment variancePartition viridis]; }; - muscle = derive2 { name="muscle"; version="3.32.0"; sha256="09dhq5x9bk89z4zd8zbx8s6mrzm01kwlxijpw525lx9i5zbi68pj"; depends=[Biostrings]; }; - musicatk = derive2 { name="musicatk"; version="1.0.0"; sha256="1v9r4k2kjcr1avn9r1d2l8mxm1m127qpf2sj8dd3gclj712hd92b"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 BSgenome_Mmusculus_UCSC_mm9 cowplot data_table decompTumor2Sig deconstructSigs dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra gtools IRanges maftools magrittr MCMCprecision NMF plotly rlang S4Vectors stringr SummarizedExperiment tibble tidyr topicmodels TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene uwot VariantAnnotation withr]; }; - mygene = derive2 { name="mygene"; version="1.26.0"; sha256="0giaca4yayz0dapzy80n640qpqhg0v09cxh5v89avb5gz5gqmfnq"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; - myvariant = derive2 { name="myvariant"; version="1.20.0"; sha256="1dj29iz6058pwyvay40n7qhpww5j1397sg5gwrggsr8yxhzgpyvb"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; - mzID = derive2 { name="mzID"; version="1.28.0"; sha256="0s7d6cz1li7v3ni6n6hrdspl93yiyr283kmbbd3hhkfgzgx6kpq2"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.24.1"; sha256="0ik0yrjhvk8r5pm990chn2aadp0gqzzkkm0027682ky34xp142sg"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; - nanotatoR = derive2 { name="nanotatoR"; version="1.6.0"; sha256="1li86lgfsky71hi1c02nqz6pk76rd8w1b57iz34c0799xqgq2m7p"; depends=[AnnotationDbi hash httr knitr openxlsx org_Hs_eg_db rentrez rtracklayer stringr testthat]; }; - ncGTW = derive2 { name="ncGTW"; version="1.4.0"; sha256="1v7pzd6n2sc9arn2qq4s9081ha8i9qzsyidzfkmfcc3n175c041q"; depends=[BiocParallel Rcpp xcms]; }; - ncRNAtools = derive2 { name="ncRNAtools"; version="1.0.0"; sha256="11k7pnqd4cjp2jin2ivbkzxk9wzcp1zj6i4c8wdvfwdh27djcqyk"; depends=[GenomicRanges ggplot2 httr IRanges S4Vectors xml2]; }; - ncdfFlow = derive2 { name="ncdfFlow"; version="2.36.0"; sha256="1knqc3ic2vpck7n7m7adxjz3ac70ra89d5gvlgp9r2q3kgaciwac"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; - ndexr = derive2 { name="ndexr"; version="1.12.1"; sha256="1vm0j12jdz3jnjs1v7frk82wyaczag9rlgs5i9ms6g6fbxbfg7yl"; depends=[httr igraph jsonlite plyr tidyr]; }; - nearBynding = derive2 { name="nearBynding"; version="1.0.0"; sha256="0ccyhg2ac6ayqs5v76qjhgf6v3bkqwkqkm0vmqw8gxk2yj6sfkif"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges ggplot2 gplots magrittr matrixStats plyranges R_utils rlang Rsamtools rtracklayer S4Vectors transport TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - netDx = derive2 { name="netDx"; version="1.2.2"; sha256="1z0if5w3lazx34c86pla4lng18zz2xzciypsm41kii767g1xz1sd"; depends=[bigmemory BiocFileCache clusterExperiment combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet httr igraph IRanges MultiAssayExperiment netSmooth pracma rappdirs RColorBrewer RCy3 reshape2 ROCR Rtsne S4Vectors scater]; }; - netReg = derive2 { name="netReg"; version="1.14.0"; sha256="0xchwacz12pfwr8rvlb51m2fnbf6611j0k892lkj0bqmz6xkvlzj"; depends=[nloptr Rcpp RcppArmadillo reticulate tensorflow tfprobability]; }; - netSmooth = derive2 { name="netSmooth"; version="1.10.0"; sha256="0gk9csmjjszy3ygm9vfjah9f5a8j7n3m4bgnc5smfl3ycrfbnjdi"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; }; - netbiov = derive2 { name="netbiov"; version="1.24.0"; sha256="123244n6x2i5769jykn3pvyhxg11lqcc0i3sd8c1hjg5ghpx8w0m"; depends=[igraph]; }; - netboost = derive2 { name="netboost"; version="1.6.0"; sha256="0sc1b672077dcdswl0hwdl6k603xfmiwhkymwzmdgr7f1ln3rg1n"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; }; - netboxr = derive2 { name="netboxr"; version="1.2.0"; sha256="01ajvpi7xmqawvi56k6wm63vb9kh8dpk0gzkr55c27lk01fgw9hb"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; }; - nethet = derive2 { name="nethet"; version="1.22.0"; sha256="1vfyyzmq52cfbd3rnk8mg3kcwj932c6g6my4kr2qvjq9md3acxcx"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; }; - netprioR = derive2 { name="netprioR"; version="1.16.0"; sha256="1nhsrjxn1q21f554xrgwd3pmxycmaqqigyqq4n4bfh17h8mkymng"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; - netresponse = derive2 { name="netresponse"; version="1.50.0"; sha256="0hpsrimi10yzrry6kf35wxx47d89n8lgih9fng3b8vmcalrxc015"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; - networkBMA = derive2 { name="networkBMA"; version="2.30.1"; sha256="0b421apq0crbml3mddskdcspvh60k0vwip666x8fl8743cjxq79r"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; - ngsReports = derive2 { name="ngsReports"; version="1.6.1"; sha256="1n1wknabs07a2wxmgnw8sy2yki3dxx075n7jrvx0xky4gyyjf6sx"; depends=[BiocGenerics Biostrings checkmate dplyr DT FactoMineR forcats ggdendro ggplot2 lifecycle lubridate pander plotly readr reshape2 rmarkdown Rsamtools scales ShortRead stringr tibble tidyr tidyselect viridisLite zoo]; }; - nnNorm = derive2 { name="nnNorm"; version="2.54.0"; sha256="0sr3vajx415yfyv0rw273l90p1blc62bd1sn47xbhq0jhv1bp6w7"; depends=[marray nnet]; }; - nondetects = derive2 { name="nondetects"; version="2.20.0"; sha256="1qhxvgdkzzskh9gc6x6761s67mfqxi2nk84780r5ll50k7wp9m4x"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; - normalize450K = derive2 { name="normalize450K"; version="1.18.0"; sha256="185yv77z0zp3vz13k9w8jlb0839pz25jvihxypcfciccqy17jz2d"; depends=[Biobase illuminaio quadprog]; }; - normr = derive2 { name="normr"; version="1.16.0"; sha256="0vpdhzl0qyln7g6isq6l3r24lrrfnpp969gfbi4kmfnixbb32j1n"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; - npGSEA = derive2 { name="npGSEA"; version="1.26.0"; sha256="0wlvxsxykj14hc103skf8f38sk9920mdcddsi1c416159z43bhwl"; depends=[Biobase BiocGenerics GSEABase]; }; - nuCpos = derive2 { name="nuCpos"; version="1.8.0"; sha256="03ybqzdmq6fzg3l4knrwg3pfv32zsxr67k7c6i86j9h7np718pqh"; depends=[]; }; - nucleR = derive2 { name="nucleR"; version="2.22.0"; sha256="0lppa1bihcys9cmr89xdfbjil7557b3x7xdmr656icg54awcs9bw"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; - nucleoSim = derive2 { name="nucleoSim"; version="1.18.0"; sha256="0wzzb1snw63ks0nikw2k5mjwhffs6ka5b0wkih7p06lcrshypbik"; depends=[IRanges S4Vectors]; }; - occugene = derive2 { name="occugene"; version="1.50.0"; sha256="1qki6s74z6lzy4qfclcrr7bq1gyi7n028vi1lkifzj2qscjbm36q"; depends=[]; }; - odseq = derive2 { name="odseq"; version="1.18.0"; sha256="15864c2w9akx1z9fks9l84d7car48z98mqgfzlx9cqz7x1q2s49a"; depends=[kebabs mclust msa]; }; - oligo = derive2 { name="oligo"; version="1.54.1"; sha256="0cpfkvxpni7an361li0k0qlfcraj7z9zv71r25dbly5kp3dql7k3"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.52.0"; sha256="19p6h0cgnma5md5mm9bn6rxfhr0a9znljgdbvsqybms6asvh18gy"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicRexposome = derive2 { name="omicRexposome"; version="1.12.1"; sha256="0rn3v02mzqmvibdqwsrcd9h40pphsa0fxmkq9rmf6616idfbxjds"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; - omicade4 = derive2 { name="omicade4"; version="1.30.0"; sha256="1q1kzykrp3393c0mr6dmpw9blnb34747i3b45j5llc76r7rl787l"; depends=[ade4 Biobase made4]; }; - omicplotR = derive2 { name="omicplotR"; version="1.10.0"; sha256="1ghwr4x5sfbqz8kcx8zb3bhqyy3jh492ibi488lwhzj2sjxycrlh"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; }; - omicsPrint = derive2 { name="omicsPrint"; version="1.10.0"; sha256="1pnsn68pscbii9kklc4dj7s19zcvyax8zjifccagnryx6n7q796c"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; - oncomix = derive2 { name="oncomix"; version="1.12.0"; sha256="1dzlqyh9nsay11d0n03wabzjlk7329f7d29lbxf6xs0v42w1m4df"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; - oneSENSE = derive2 { name="oneSENSE"; version="1.12.0"; sha256="0snpa5r2r0kmmjzd47wyybsajp44vf2clqbg3z9yyjszx9qal790"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; - onlineFDR = derive2 { name="onlineFDR"; version="1.8.0"; sha256="0232bgdgv4zfp9hl6whv3qfflkg11w5a9189l8wz4048ys54kssq"; depends=[]; }; - ontoProc = derive2 { name="ontoProc"; version="1.12.0"; sha256="08sidx0b4mmnlsghgcrr484ih6v33kdknar7y0yrxbjndzbb2iik"; depends=[AnnotationDbi Biobase BiocFileCache dplyr DT graph igraph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; }; - openCyto = derive2 { name="openCyto"; version="2.2.0"; sha256="02dymy5fa0wjd4pql3jdv1d65mak7ra4il96va7c0km8s87rn40v"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - openPrimeR = derive2 { name="openPrimeR"; version="1.12.1"; sha256="0wgy2f66lr6pr9yqxkj3y23f29pnk0mzjayh31rk75sm1nw7rxjh"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; - openPrimeRui = derive2 { name="openPrimeRui"; version="1.12.0"; sha256="1n5zz5vv8fpc3p9w9nf5bc1x4w7l664wvbp25mmm7d0sjjcridnq"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; - oposSOM = derive2 { name="oposSOM"; version="2.8.0"; sha256="1ndsy165pkr1w43q7vj83x49l6g50ag1cg1zd4kip1jba77vdcd0"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; - oppar = derive2 { name="oppar"; version="1.18.0"; sha256="1ililwr4xl1r1814sdqbgq3ypc5l9mbam3xhmk0pgrb5pcvq7hc6"; depends=[Biobase GSEABase GSVA]; }; - oppti = derive2 { name="oppti"; version="1.4.0"; sha256="1im77fy7qxvflhzbzir1igsagjdx4glpxs7dw2f5rbzmxzqph8w4"; depends=[devtools ggplot2 knitr limma pheatmap RColorBrewer reshape]; }; - optimalFlow = derive2 { name="optimalFlow"; version="1.2.0"; sha256="1fv73ra0iabw8dbbi8647hbb586j5mvzgws8zy4r20yyfyd08ryn"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; }; - pRoloc = derive2 { name="pRoloc"; version="1.30.0"; sha256="037vw7py1w0by59qpsn3c5vf4x1zcp4c9q45crfwx0i72s5v9wyk"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="2.0.0"; sha256="0g746czwdivls5cc6pfgydsbfi22w0c042ri14hqyxgb2437rxgn"; depends=[Biobase BiocGenerics colorspace colourpicker dplyr DT ggplot2 MSnbase pRoloc scales shiny shinydashboard shinydashboardPlus shinyhelper shinyjs shinyWidgets]; }; - packFinder = derive2 { name="packFinder"; version="1.2.0"; sha256="0f8fpsyvdfy7dc0695xgymqzsbv0b9gfgxgigw8584805qs8661g"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; }; - padma = derive2 { name="padma"; version="1.0.0"; sha256="0zi99gakwsgyb3k4lmg8s5xd7j7fdvf87qnyzgaqr1qc1hhcm0qw"; depends=[FactoMineR MultiAssayExperiment S4Vectors SummarizedExperiment]; }; - pageRank = derive2 { name="pageRank"; version="1.0.0"; sha256="1ycqz5sl8az3vdr52x6sjng66q4ijca475i668cn5kl40f8cyidp"; depends=[GenomicRanges igraph motifmatchr]; }; - paircompviz = derive2 { name="paircompviz"; version="1.28.0"; sha256="1zjjzng3mx99c2p27203sprq66lpm4w39pkicb0i0mzwl63i4kzn"; depends=[Rgraphviz]; }; - pandaR = derive2 { name="pandaR"; version="1.22.0"; sha256="0ilmagdib4d8bz7vxg6cmibqvjxm4hfrr789mlnq24v1fz6mg5zp"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; - panelcn_mops = derive2 { name="panelcn.mops"; version="1.12.0"; sha256="0cv20bpsmv6vn64q8ss3zdi6m1m9bqjbq8b6f4gkjhv61v5fpnr4"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; - panp = derive2 { name="panp"; version="1.60.0"; sha256="165rgqxff1i36lg8razdgspz4rl6wnz7h419bmjici7vwmjm9grf"; depends=[affy Biobase]; }; - parglms = derive2 { name="parglms"; version="1.22.0"; sha256="1x8ps1i7cjf57yrj2i31gch78cx10rirdw1lm4j4fl4hqy8vrw4m"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.48.0"; sha256="1prq3y163fw7m9z094jhqcaq4n79m9a0bh16nf86qsbbivy2153d"; depends=[]; }; - pathRender = derive2 { name="pathRender"; version="1.58.0"; sha256="1vkp5c97haw1z41c61yrjwsjq9a38hngandwasx88kh1glgkr1dy"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; - pathVar = derive2 { name="pathVar"; version="1.20.0"; sha256="1wga41vgw6vcaciry8i794gdkc4mbirrbbiml5fav7ivairz4avl"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; - pathifier = derive2 { name="pathifier"; version="1.28.0"; sha256="0mx4bsdafsb92q940z9c47z6582zb239iss7032cplars6r2rmx3"; depends=[princurve R_oo]; }; - pathview = derive2 { name="pathview"; version="1.30.1"; sha256="11fisiksw1y64ii9q8p2znyp9w8mlqzgiaacmycw59rngkjlmbs4"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - pathwayPCA = derive2 { name="pathwayPCA"; version="1.6.3"; sha256="0hvzbr0m25av4a7n428bdvrlzwilrbjd9xqw39zbr1jni2p26dri"; depends=[lars survival]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.24.0"; sha256="0wgz1hppakc9j94xx5327z1563skp4klbsh1vn7p5p92pqxpyjmn"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; - pcaExplorer = derive2 { name="pcaExplorer"; version="2.16.0"; sha256="0b715cs921xll2b3061s0qxx495ydmrhy84ig2q6x8rdmp2kmxxs"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.82.0"; sha256="04xb4vjky6hq58l30i1iq9rv5gzjdxnidjxpnzg7pvg67vz8pgf0"; depends=[Biobase BiocGenerics MASS Rcpp]; }; - pcot2 = derive2 { name="pcot2"; version="1.58.0"; sha256="0igp8925c4hs45vah8zdhzampm5lrrxcc80822nbqm3vzw6a9x9n"; depends=[amap Biobase]; }; - pcxn = derive2 { name="pcxn"; version="2.12.0"; sha256="1l4b5lwlpspzsnaymargszzl5nsdd4i9zz4y7hg9aclqvc9p0g4q"; depends=[pcxnData pheatmap]; }; - pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.54.0"; sha256="1l98m4dj463rsqm4jwhq0792cdwqr53prhva3fpxq2vflfhlw761"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - peakPantheR = derive2 { name="peakPantheR"; version="1.4.0"; sha256="1dg047da4rnc2hdl4ryfa9z6cwa06904h3g06c5f310g5nwhxfmw"; depends=[doParallel DT foreach ggplot2 gridExtra minpack_lm MSnbase mzR scales shiny shinycssloaders shinythemes stringr XML]; }; - peco = derive2 { name="peco"; version="1.2.0"; sha256="1qv0bpykjvl7vkdvzch2fcf854d9pdlwwf9ggh9xisl5n66bbb3a"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; }; - pepStat = derive2 { name="pepStat"; version="1.24.0"; sha256="08ilvgnvj5s6kwaax3axx8nn8kpxqkb8va9d3cfcy1lqin4nqhk5"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; - pepXMLTab = derive2 { name="pepXMLTab"; version="1.24.0"; sha256="170ihyqj4nvim19222lgpr2h1dinb4rbirdj42bbp4qvqsxqpb1d"; depends=[XML]; }; - periodicDNA = derive2 { name="periodicDNA"; version="1.0.0"; sha256="11ag81mp5srqmnp1kf8bz77rw2l8zyc3q69rmcasrv0cpwm1w5pv"; depends=[BiocParallel Biostrings BSgenome cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr rtracklayer S4Vectors zoo]; }; - perturbatr = derive2 { name="perturbatr"; version="1.10.0"; sha256="1ny5dlkdr3bzb06fs8r777jnx7x6xgpx4zb1d1sqpq5irzxcag5p"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; - pgca = derive2 { name="pgca"; version="1.14.0"; sha256="1si07zxkhvy966c4brdjldwll6f4zyk419ji730hmfw7jsif4ni5"; depends=[]; }; - phantasus = derive2 { name="phantasus"; version="1.10.0"; sha256="0cnzw91is8rwj0wr6j526ymihy8w1cfpasijbni1igwsc3f7sfmm"; depends=[AnnotationDbi assertthat Biobase ccaPP curl DESeq2 fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; - phemd = derive2 { name="phemd"; version="1.6.0"; sha256="182y80fcqb9skb1xk68drbrlmy9v516pk5nbxxvj0mpk5r1bpc89"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; }; - phenoTest = derive2 { name="phenoTest"; version="1.38.0"; sha256="0jmzzg2ybcwaidd7z8176kz9gs9m0m7a4f4f30k6j6va385dkr53"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; }; - phenopath = derive2 { name="phenopath"; version="1.14.0"; sha256="1y3gkk8pavkmgqpg9f5naikfhws4p9gzj58qg1m8namhmjqmphvl"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; - philr = derive2 { name="philr"; version="1.16.0"; sha256="09x8yahm1m6l6fsfqspjns4a8fzfcpx1zqf5cx8glhig7dcdfaq0"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; - phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.14.3"; sha256="1g0w17j3gslkqp7p7l3ml2zg8am7vxzczq7q5d30q1ylh4n0b6n7"; depends=[matrixStats plyr]; }; - phyloseq = derive2 { name="phyloseq"; version="1.34.0"; sha256="1mzwkcyf0wqlp8y1mgskvlrkalqmr9ag3zkw5s3hznkv6ynx3d5l"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="2.6.0"; sha256="1hcdqvfk86wxblbbsjwnyqbs5djgbfxbb7dhhnfqwwvfpryi9mz6"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; }; - pickgene = derive2 { name="pickgene"; version="1.62.0"; sha256="1ankg0pjmlcmkqvhzwbawm0x7c1ddf2bhj6a7wm8q76qm466v856"; depends=[MASS]; }; - pipeComp = derive2 { name="pipeComp"; version="1.0.0"; sha256="0p3ng4q37mjc5b98h1kv9l0m40l3hvma84wpg5ixfzbayipdixl3"; depends=[aricode BiocParallel circlize clue cluster ComplexHeatmap cowplot dplyr ggplot2 intrinsicDimension knitr Matrix matrixStats randomcoloR RColorBrewer reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment SummarizedExperiment uwot viridisLite]; }; - pipeFrame = derive2 { name="pipeFrame"; version="1.6.0"; sha256="16yp93h3w8ax25cpfsg697bvbz1b1348dnrccy19x46i1ingnv08"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr visNetwork]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.56.0"; sha256="1g8l2b4b2a40dx37s5ghln886dmjzp8aa8w4yyfvhzf4411cwms7"; depends=[graph RBGL]; }; - plethy = derive2 { name="plethy"; version="1.28.0"; sha256="0f50avlrrj8x95a9vvd6z3m9bvj1l3cs35mann8srsc756pgbiqz"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; - plgem = derive2 { name="plgem"; version="1.62.0"; sha256="039gqwsm1v6q8v8b248nm8g9gnsk379mfx65rbgdmh3chsd8pm8a"; depends=[Biobase MASS]; }; - plier = derive2 { name="plier"; version="1.60.0"; sha256="079jq9lbl2iklsbd1psv11jxjj33wy10kva80749zqs2lfmcc5dy"; depends=[affy Biobase]; }; - plotGrouper = derive2 { name="plotGrouper"; version="1.8.0"; sha256="1c3f3x0z9smpcvz6bzalqbmhabgcph1rclarh4l1afgn9hba3rdi"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; - plyranges = derive2 { name="plyranges"; version="1.10.0"; sha256="1mk9qi8r8saalb16jimilk9g6hdwvlxrbkj2hnjj5f8nnc228jr0"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; }; - pmm = derive2 { name="pmm"; version="1.22.0"; sha256="0c6280cfyhnyfk5v7fkdy7rs8x2qbkp2y19jh2399b7f0yycaacy"; depends=[lme4]; }; - pmp = derive2 { name="pmp"; version="1.2.1"; sha256="08cfa8k4rl2jj1sbwlg1ba7kvq450ndsndsm7db08c9696rvg9qq"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; }; - podkat = derive2 { name="podkat"; version="1.22.0"; sha256="1s6al51cvnnszk1kh4lcxigqc7j8j5yndvkykmizk0048ab4ly5n"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; }; - pogos = derive2 { name="pogos"; version="1.10.0"; sha256="0jn1c9mjpqhirymh8qa4xnddn6wrvxabimxy94ia3bwpfg6bl81s"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; - polyester = derive2 { name="polyester"; version="1.26.0"; sha256="1g813svwcrlfny78rqd4wlcg7snfnj88ldw3q7zpksidipxjyhwk"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; - powerTCR = derive2 { name="powerTCR"; version="1.10.3"; sha256="0abrnkcnpy92d2f1i58n2lx4cgyyfwglwnrfzbc7g89dysdpyvrw"; depends=[cubature doParallel evmix foreach magrittr purrr truncdist vegan VGAM]; }; - ppiStats = derive2 { name="ppiStats"; version="1.56.0"; sha256="0b0ay6gymfcxbdp0ws0k8yzypqzl4391jjkgkmv3wwvb4vg0h5y8"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - pqsfinder = derive2 { name="pqsfinder"; version="2.6.0"; sha256="1c3s89r80wm1hk3ng5kggby1290zhwyixcbvqj0h5kf536m1f9cs"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; - pram = derive2 { name="pram"; version="1.6.0"; sha256="0494rh75vqdgd7ffiq8lwpr6743bb7bzb5ipc2h4brqrg4vjcpiz"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - prebs = derive2 { name="prebs"; version="1.30.0"; sha256="0z6xhyy4k5zsp1w285fsf1jdn89n00j8n9dn4rss2d810zv0d1x6"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; - preciseTAD = derive2 { name="preciseTAD"; version="1.0.0"; sha256="0dr3ix0yq792nj0rxxsmh6nzj9zz3kp4krs6nd6bbbba4vhd9p07"; depends=[caret cluster dbscan doSNOW e1071 foreach GenomicRanges IRanges ModelMetrics pbapply pROC PRROC randomForest S4Vectors]; }; - predictionet = derive2 { name="predictionet"; version="1.36.0"; sha256="0lsybdx2c5hkbkgz1d7rn3phl47gka0c09dni13fxb9km4r4bj00"; depends=[catnet igraph MASS penalized RBGL]; }; - preprocessCore = derive2 { name="preprocessCore"; version="1.52.1"; sha256="1hz7rlpscaczvvcalky2f5bmr70aii455549m7f6wk10aklp3nll"; depends=[]; }; - primirTSS = derive2 { name="primirTSS"; version="1.8.0"; sha256="0smlhv67vjy8in65z10c3i8zcmimqy3p3zrfghg34dna2402rsyp"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; - proActiv = derive2 { name="proActiv"; version="1.0.0"; sha256="0540psb9y2n572zc75hyry1kdq53mq5ylhkmvqzwz8hgck75bzm3"; depends=[AnnotationDbi BiocParallel data_table DESeq2 dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges rlang S4Vectors SummarizedExperiment tibble]; }; - proBAMr = derive2 { name="proBAMr"; version="1.24.0"; sha256="1ca7dbkc2ik8gfg0jif3l4y62vz2ibd74dxivyxcnsqdqdx4db9a"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; - proBatch = derive2 { name="proBatch"; version="1.6.0"; sha256="07im4aa6r85sln8fx3kyygig1y6qzy6v9rsfj68llcwkr1fngvm5"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; }; - proDA = derive2 { name="proDA"; version="1.4.0"; sha256="1vhb27dha2adbcknrrv965z6zdrsqfrpz3ihma514ay0n0gr90fc"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; }; - proFIA = derive2 { name="proFIA"; version="1.16.3"; sha256="0piqg7f3d2263j98q8vn3502vkwgi4xsa65anp0hxgw7072kp5bh"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; - procoil = derive2 { name="procoil"; version="2.18.0"; sha256="1y932hq5ffq98ypaxd58zqwpq1hshi8x8ny4k3pvp7xgkxid5gq3"; depends=[Biostrings kebabs S4Vectors]; }; - profileScoreDist = derive2 { name="profileScoreDist"; version="1.18.0"; sha256="1yxp172ggsc54lgvbrmgazj886wnw2krpssinnfjjn7cyzdmpg86"; depends=[BiocGenerics Rcpp]; }; - profileplyr = derive2 { name="profileplyr"; version="1.6.0"; sha256="10ki9gp5pfrb8m015v5csl353mrqcqn9fbj5qwh1kbbh6jxvgdqn"; depends=[BiocGenerics BiocParallel Cairo ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rlang rtracklayer S4Vectors soGGi SummarizedExperiment tidyr tiff TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - progeny = derive2 { name="progeny"; version="1.12.0"; sha256="00lhzz4plmx5128khs298n6zv9204mhqv548lxxdhaw18b16vwm7"; depends=[Biobase dplyr ggplot2 ggrepel gridExtra tidyr]; }; - projectR = derive2 { name="projectR"; version="1.6.0"; sha256="03ggj1vqb7b2c0dlfp1syvi3zwab322lap7jf3mfd7mdiq2ljyl4"; depends=[cluster CoGAPS dplyr ggalluvial ggplot2 limma NMF RColorBrewer reshape2 ROCR scales viridis]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.30.0"; sha256="0z62j29y5d6p7bz70z6p4666s00s1ls1hj7m07w4gkfwi9jlvlmp"; depends=[]; }; - psichomics = derive2 { name="psichomics"; version="1.16.0"; sha256="036rqyr3xxj8k9a5gmm17vyzs5hlansya9j7402q5lrv9g9s1jfn"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma org_Hs_eg_db pairsD3 plyr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; - psygenet2r = derive2 { name="psygenet2r"; version="1.22.5"; sha256="0i5pbqvr15fhr6xfvk96r6falx2zlghxi846pb51srdggggxbnm6"; depends=[BgeeDB Biobase biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; - pulsedSilac = derive2 { name="pulsedSilac"; version="1.4.0"; sha256="1wqbxxlicnkdwmr8jgzkfjjbpc89vdmfcw6fspdvfh8zv8rzq24v"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment taRifx UpSetR]; }; - puma = derive2 { name="puma"; version="3.32.0"; sha256="0ak989nkwk524jcip5b98mfixd8bvdgxv1205d6v8cjzk8rw3r62"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.38.0"; sha256="0n2i830ai5yr42b7w0syn8jd81khqhb0sx0lqq7s6b7dzx52821j"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.30.0"; sha256="02x5q1d9k1a58ywdln27zmj8c90idim0010wibw01xkdfzqhjzh6"; depends=[Biobase lme4 Matrix vsn]; }; - pwOmics = derive2 { name="pwOmics"; version="1.22.0"; sha256="0gg68y95hbkzkp0iw6kcpsxrqxh3x2v4k514sz2jqrwj3hy71f18"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; - pwrEWAS = derive2 { name="pwrEWAS"; version="1.4.0"; sha256="119368qhbg2pxwjs9dyp2w2vlhhbxlxjwdivbbsdmlaa3x0yhxb1"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; }; - qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.8.2"; sha256="1s28z34rrdk2v04ldwsda36lhm1jfzy876mipzqb55pqa565b0kb"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer readr rlang scales stringr tibble tidyr tidyselect]; }; - qckitfastq = derive2 { name="qckitfastq"; version="1.6.0"; sha256="0dilgqak6yh59q3ydnf1ypmfkrvq00g3w7lgkrp0p3va6xyryq1n"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.28.0"; sha256="065zrimqfqd7ia52gzbnan93khp25q2s5kf852a9igj5ngzv5b7g"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; - qpcrNorm = derive2 { name="qpcrNorm"; version="1.48.0"; sha256="1qa3m3zym2m64icysyfn4dwzlgslvlg0c5ljmxmyw834lk6zljca"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.24.3"; sha256="090idsm1zrrhbzp6r28nyimv7675ld7mx885v4hvh2js5m9znw3l"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; - qrqc = derive2 { name="qrqc"; version="1.44.0"; sha256="0p4gj73rbb03sikg7b6viz8k76x9j15wh3sxizhv3q5xmrjkkkqr"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; }; - qsea = derive2 { name="qsea"; version="1.16.0"; sha256="05xzpvfmg4q44jfvi4ycjlxlj1gvfqrip7qzny3kyxrr5wiykh9h"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges KernSmooth limma MASS Rsamtools rtracklayer zoo]; }; - qsmooth = derive2 { name="qsmooth"; version="1.6.0"; sha256="0yhhb62lyp4dxmm401jv4xv2kx8z9qdfc0pzngk6dbgv6pg86agq"; depends=[SummarizedExperiment sva]; }; - quantro = derive2 { name="quantro"; version="1.24.0"; sha256="1mq4hda73idkq0lkfrhcmiz4kkalfn47dh3i75br5fi33mdgc0k2"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; - quantsmooth = derive2 { name="quantsmooth"; version="1.56.0"; sha256="14zd5zf8cyaps91c7dkw1a7bm089nghgqgj6z72aznqsqdq710fr"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.24.0"; sha256="1i63y29g36fwdkaj2vn68np003i96c85viynjq8j4mfzgmb3kch7"; depends=[Biobase emmeans fftw limma nlme]; }; - qvalue = derive2 { name="qvalue"; version="2.22.0"; sha256="0xbww16lz0k2p4mmq1aqd7iz7d8rvzgw1gm55jy6xbx19ymj64i5"; depends=[ggplot2 reshape2]; }; - r3Cseq = derive2 { name="r3Cseq"; version="1.36.0"; sha256="0cx99cvaw3qzmvp2v16ap3g4pmfw7dkyj8kvxmr9mc2ql6vazy3i"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.30.0"; sha256="0icbdi3nc9mpc2sh7gvfprg2q7d0j15wzsaadv0ngj5nd09vv9yc"; depends=[data_table XML]; }; - rCGH = derive2 { name="rCGH"; version="1.20.0"; sha256="0d4wpfbx1diaccyaii6jfq9snb02vs4y7hrg2p74jmsjs82r8sm8"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - rDGIdb = derive2 { name="rDGIdb"; version="1.16.0"; sha256="04lhwzwmfw7q38yalpf0k17zpspazqgipksdr3sip199k1yfiri0"; depends=[httr jsonlite]; }; - rGADEM = derive2 { name="rGADEM"; version="2.38.0"; sha256="0x13glgkcnjg4qsn0v0qgzy6bgmghqpvgwfww2ha641p0c5i9qzw"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.22.0"; sha256="0p2b8cqxibxxmsh687y7yvlvr2a5ipiz53jb4wsr8ddypynb1asj"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; - rRDP = derive2 { name="rRDP"; version="1.24.0"; sha256="1dvllc8b3lk2n3g7z97k1bs2psgqx94l6yljw09vckss96hx4gpg"; depends=[Biostrings]; }; - rSWeeP = derive2 { name="rSWeeP"; version="1.2.0"; sha256="0xl8nrlql3xcv9qlcgs7qkgb4psy0wx8yn53ixxl4my9b2ah8p3p"; depends=[pracma]; }; - rScudo = derive2 { name="rScudo"; version="1.6.0"; sha256="1azxkfkvzpvs0dxja8r10s2i0f7gk1r8xab5348r8vh6gx72dwhh"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; }; - rTRM = derive2 { name="rTRM"; version="1.28.0"; sha256="1viz805yxaz9g3sxk2sn11v8ghb91ribzrlhczafabmcm27aag1b"; depends=[AnnotationDbi DBI igraph RSQLite]; }; - rTRMui = derive2 { name="rTRMui"; version="1.28.0"; sha256="00jnq3dfl9qgq5z713jqvxvm84bgr6x87f4k8yxk2pqxp3mjnc37"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rWikiPathways = derive2 { name="rWikiPathways"; version="1.10.2"; sha256="17q03y7svx1zlipl0aiwaj7msl70sx3w1n2m5w3dwgs2yzdkb40b"; depends=[data_table httr RCurl rjson tidyr XML]; }; - rain = derive2 { name="rain"; version="1.24.0"; sha256="1cac8jajaxyy0sljzp5wpbbdhyvi1xfczc80xfwjn8c2zq73vqqy"; depends=[gmp multtest]; }; - rama = derive2 { name="rama"; version="1.64.0"; sha256="1pq0jzfgrq28v5ar8h1gxjv1052m84ina2j60rrda2fyap5j5s0x"; depends=[]; }; - ramwas = derive2 { name="ramwas"; version="1.14.0"; sha256="1h0v8nikjs4li7hk0f5ppifwwsjmqd0xk5n44skixv1v4hargqp9"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; - randPack = derive2 { name="randPack"; version="1.36.0"; sha256="1lv6gry0biwmil3c6f2w1kyrvfyxlxflzwa2942gpljkfwadjars"; depends=[Biobase]; }; - randRotation = derive2 { name="randRotation"; version="1.2.2"; sha256="1ij2mjnnwr2bq7knkvxzajr6x7459xxww6kgdrqf5wlnh2q88wq7"; depends=[Rdpack]; }; - rbsurv = derive2 { name="rbsurv"; version="2.48.0"; sha256="0bc7r2q5n7daz59vyw2pjqywj3skqpjq46wz1w4a87rixq0gb8dg"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="2.12.1"; sha256="130i0fsdh2my48d4bkhwpip38bl9mb79r64bsb3p97ikl11s84mg"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; }; - rebook = derive2 { name="rebook"; version="1.0.0"; sha256="0djnsd8695smim2rm7jpfc5z2f4kqmaq4vd0bfm4vbi4vd40zdyh"; depends=[BiocStyle callr CodeDepends knitr rmarkdown]; }; - receptLoss = derive2 { name="receptLoss"; version="1.2.0"; sha256="0bkcnql30qw8dzbgz9xps0jwhvqmrpnzjc4l1v35qmyy65z3qxw0"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; }; - reconsi = derive2 { name="reconsi"; version="1.2.0"; sha256="18vdmdq9jdb9i7ssaj48ibi8sxfv4xj1b6nhsb2qc1x4b6bvyc17"; depends=[ggplot2 KernSmooth matrixStats phyloseq reshape2]; }; - recount = derive2 { name="recount"; version="1.16.1"; sha256="13hrzc6x02kr9nsgw5x1z1ky4rb4s7ddqp5l0j0hwnqpnvlc92h1"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; - recount3 = derive2 { name="recount3"; version="1.0.7"; sha256="1cv068p8zcpzr5nk5xhw8x0ic2g2i5zhqrwzasmgbg4s2lik2g1z"; depends=[BiocFileCache data_table GenomicRanges Matrix R_utils RCurl rtracklayer S4Vectors sessioninfo SummarizedExperiment]; }; - recountmethylation = derive2 { name="recountmethylation"; version="1.0.0"; sha256="1cwdcxn5v95gccqjcgr56rizxkh1l194h4zzlwdi3m566666yla4"; depends=[BiocFileCache HDF5Array minfi R_utils RCurl rhdf5 S4Vectors]; }; - recoup = derive2 { name="recoup"; version="1.18.0"; sha256="1bdikndljhcb92c21ag1s6b6d692zq8rhhpiph8akkr4v3v4y9wy"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 httr Rsamtools RSQLite rtracklayer S4Vectors stringr]; }; - regionReport = derive2 { name="regionReport"; version="1.24.2"; sha256="17h9z05rzcj4ysaldwfn6c2wrynyzgl205b7n2ra1qf6g1wj4s3f"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; - regioneR = derive2 { name="regioneR"; version="1.22.0"; sha256="0c2khfyrgy3y68cj6b07s91hplabbj70xwdgwrf2bsd9h6gknjdi"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; - regsplice = derive2 { name="regsplice"; version="1.16.0"; sha256="0ngvblqhmvfixh6r5l6fw0fzkcqv2bnl99ld7k0ggbbsmzb4gnmr"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; - regutools = derive2 { name="regutools"; version="1.2.3"; sha256="1v8x5nzlnc6x4cjg7lhm5r6vh4ih7i8gs9sba02sj9nz5x8fbjwp"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; }; - restfulSE = derive2 { name="restfulSE"; version="1.12.0"; sha256="10g4fwgxdj94q4cmrzypslfdkbcwsig5f8acsidawn6yr7qwa264"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; - rexposome = derive2 { name="rexposome"; version="1.12.4"; sha256="0qjhgpx1pka5rqfymf5fzn9adr494v6xvfwsmy88x94jr070ph3s"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; - rfPred = derive2 { name="rfPred"; version="1.28.0"; sha256="1knaa8laz3ls4k2wxp1991j4qa1yffs9pzydkgmpv24sniqpczif"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; - rfaRm = derive2 { name="rfaRm"; version="1.2.1"; sha256="1q77sv8wlzpzx0cs6xpw45k9al5rv7vcrkvrcaaiqizknafz7k02"; depends=[Biostrings data_table httr IRanges magick rsvg rvest S4Vectors stringi xml2]; }; - rgsepd = derive2 { name="rgsepd"; version="1.22.0"; sha256="1y672lmf1mdfs1nxrfbhvwlpk6d7x382x56mlld5w05zc8whvgwg"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.34.0"; sha256="0almr1vscrgj5g4dyrags131wia2pmdbdidlpskbgm44ha6hpmqi"; depends=[rhdf5filters Rhdf5lib]; }; - rhdf5client = derive2 { name="rhdf5client"; version="1.12.0"; sha256="0j7a6x9k902q0xg8491s73vsli0vl3s451vgqxdr95m0pg9g9bkc"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; - rhdf5filters = derive2 { name="rhdf5filters"; version="1.2.1"; sha256="1bjlgc76vx0z81s8vci9ln1d2s3b157qnm32xs36mnyjk31ivasz"; depends=[Rhdf5lib]; }; - riboSeqR = derive2 { name="riboSeqR"; version="1.24.0"; sha256="07i64gch14rsbjlfv17s689wzlqbi7hcqhcw21pp6cw8bvhvd5xr"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; - ribor = derive2 { name="ribor"; version="1.2.0"; sha256="0kd5i4l99hkfd48vdn7wibm74pkhd67jbn0lcz5dh4rhkv5iyajg"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; }; - ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.2.1"; sha256="15nvf5bhy33ry583zyfav2np0psnrdmwrv017fpadi772jd1qq31"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales XVector]; }; - rmelting = derive2 { name="rmelting"; version="1.6.0"; sha256="01cq5c532bibr2iclrfl7liclk89fw5qyyz4n3bnxp743l3xljpy"; depends=[Rdpack rJava]; }; - rnaEditr = derive2 { name="rnaEditr"; version="1.0.0"; sha256="03p0gv50v03lcdkwyxpdxls4blh6cp253lsbp30nb65l1zi6nlzs"; depends=[BiocGenerics bumphunter corrplot GenomeInfoDb GenomicRanges IRanges logistf plyr S4Vectors survival]; }; - rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.48.0"; sha256="0h3hfvzl2zl77ccabgbhvxl2rwfwnfk601vlgk5mzkljfdgjvj1b"; depends=[Biobase DBI edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; - rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.20.0"; sha256="1lyfr3vwfkp6ciaziq5qdrrahvjmai5s1x9a12kim6laifw4g4a3"; depends=[RColorBrewer]; }; - roar = derive2 { name="roar"; version="1.26.0"; sha256="0spidrcjnrcli0whkf6h8pa1i9dg9arjbm7b1skxbs6dn2k4yyqw"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="2.18.3"; sha256="1gmlnli5gzpza9bdw73650bp22gxk1wgmk3qiyvhs9w78qs93zp7"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; - ropls = derive2 { name="ropls"; version="1.22.0"; sha256="1h76s89hsafrkshpkx7vjinfni9lzfpnbfyg3fhkkrwpp1fnwyj5"; depends=[Biobase MultiDataSet]; }; - rpx = derive2 { name="rpx"; version="1.26.2"; sha256="068615f3fiswnj5jm7snp58cavxbffasprdx6l6aaxcfzyb9914a"; depends=[BiocFileCache rappdirs RCurl xml2]; }; - rqt = derive2 { name="rqt"; version="1.16.0"; sha256="01ksass8kfja4a971yvv5ybv3x63i0pz867nr938phjq3x04n16w"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; - rqubic = derive2 { name="rqubic"; version="1.36.0"; sha256="0isqp45cvc55ldbc4kr2dxcb78jl3csfsndvsz5cb439r4wa5qfz"; depends=[biclust Biobase BiocGenerics]; }; - rrvgo = derive2 { name="rrvgo"; version="1.2.0"; sha256="0hgnbrwhx4w47hnv5glq2zr2lgaydsypn3qi9l374x919261qlrf"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap wordcloud]; }; - rsbml = derive2 { name="rsbml"; version="2.48.0"; sha256="0vrjfhwcpc699sq78pkm022fam3ahar8h3lx3fr879dd21k02g61"; depends=[BiocGenerics graph]; }; - rsemmed = derive2 { name="rsemmed"; version="1.0.0"; sha256="0py0c81ip382qff1ybdxzwkyjkj31d3qghyyh65girg4lnfqwyc5"; depends=[dplyr igraph magrittr stringr]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.50.0"; sha256="12zimhpdzjyzd81wrzz5hdbzvlgzcs22x1nnaf2jq4cba3ch5px8"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - runibic = derive2 { name="runibic"; version="1.12.0"; sha256="0vx8p60s3bb0hc3dxj0y7sp8wdhhjsig4kn40gj1ai5q7lbvw0v6"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; - sRACIPE = derive2 { name="sRACIPE"; version="1.6.0"; sha256="1sfmsgfr8dhqr2ib9f68bg43kcjpjbmvav8fiffrl6zcwli9wjx9"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; }; - sSeq = derive2 { name="sSeq"; version="1.28.0"; sha256="0436lzz2q6cl07hr8rnk56v3b4lk7bhv4i717jzaw95ga73b2bx1"; depends=[caTools RColorBrewer]; }; - safe = derive2 { name="safe"; version="3.30.0"; sha256="1ax3kyp8xcfdv9iafzr58gg86k48dnzp4q71x6m94qbrrpjvvl2q"; depends=[AnnotationDbi Biobase SparseM]; }; - sagenhaft = derive2 { name="sagenhaft"; version="1.60.0"; sha256="0a12gynjc2g90i4k7rf808vwviwzal8l3nb0pj865i43vcrr571p"; depends=[SparseM]; }; - samExploreR = derive2 { name="samExploreR"; version="1.13.0"; sha256="0bimv4xmr0im6p7k5m4fzl3znpjcrgc6sn7vjyzy5nc5vkhycx52"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; - sampleClassifier = derive2 { name="sampleClassifier"; version="1.14.2"; sha256="04xvvvskw12jkgpx7mm0q4dhy55p5dvqlk7qcdbrzys7hxarfwqw"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; - sangeranalyseR = derive2 { name="sangeranalyseR"; version="1.0.0"; sha256="1kri1hbk2zxx38ypqz30kd2i4745v08283dh30hmqq8s008zw1b4"; depends=[ape BiocStyle Biostrings data_table DECIPHER DT excelR ggdendro gridExtra kableExtra logger openxlsx phangorn plotly reshape2 rmarkdown sangerseqR seqinr shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr zeallot]; }; - sangerseqR = derive2 { name="sangerseqR"; version="1.26.0"; sha256="19nmaq81vaxf2v17kk133gv7ki0wb01piqsswbjn31lk7x52v43v"; depends=[Biostrings shiny]; }; - sapFinder = derive2 { name="sapFinder"; version="1.28.0"; sha256="0r2zjrba72ihdaqwv55hg4zkjb6z3a16ffsg0b19wiipbgzjfmcp"; depends=[pheatmap Rcpp]; }; - sarks = derive2 { name="sarks"; version="1.2.0"; sha256="1zy49yjn6fvnr2klqwq0xhzal6c3k381lgfrqspa53p32r12zsw0"; depends=[binom Biostrings cluster IRanges rJava]; }; - savR = derive2 { name="savR"; version="1.28.0"; sha256="1vha9b7gndwjzvrzr1hdhv3wc6a1s2n9grxwfd78yb2lkysf4hic"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; - scAlign = derive2 { name="scAlign"; version="1.4.0"; sha256="0xavn9i4vl7y9ymzyjy9d7zdxhmm7d67jwwwx650gkmwkvhgcxgw"; depends=[FNN ggplot2 irlba purrr Rtsne Seurat SingleCellExperiment tensorflow]; }; - scBFA = derive2 { name="scBFA"; version="1.4.0"; sha256="161ak8w29x1r5h3cx2y3f1yrg6c6q53knd68ljaiwfppchil01nj"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; }; - scCB2 = derive2 { name="scCB2"; version="1.0.0"; sha256="1acmcil38wcxknbr9dhbd76ssvwqsbby1i82x9l2iax4allhx9mb"; depends=[doParallel DropletUtils edgeR foreach iterators Matrix rhdf5 Seurat SingleCellExperiment SummarizedExperiment]; }; - scClassify = derive2 { name="scClassify"; version="1.2.0"; sha256="13y9xz6g7qmyiby6cxh719i7pa367agq5lvcsxvlsnmbzcqam0m6"; depends=[BiocParallel cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; }; - scDD = derive2 { name="scDD"; version="1.14.0"; sha256="07l07fq5633ccq5d3l35dm34pwvaqfa3b3qwpn5v5xn99f5hfz0g"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; - scDataviz = derive2 { name="scDataviz"; version="1.0.0"; sha256="0p3ia0lab4n3y2i23cjnhi1iyl49a53yjldl3nc1s2lxqpl60jpp"; depends=[corrplot flowCore ggplot2 ggrepel MASS matrixStats RColorBrewer reshape2 S4Vectors scales Seurat SingleCellExperiment umap]; }; - scDblFinder = derive2 { name="scDblFinder"; version="1.4.0"; sha256="08nmmmcyn4vs79zyi1g4mc8br1dnsxb0b4sl3cgv6qdr513f0641"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray igraph Matrix S4Vectors scater scran scuttle SingleCellExperiment SummarizedExperiment xgboost]; }; - scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.10.0"; sha256="00w65r1zdmsi93d7xdrdxkq6a8qiplpkaiy17f2cqcyz44m28f9f"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; - scGPS = derive2 { name="scGPS"; version="1.4.0"; sha256="0d210xrvpmrxc57ldmzkd2xa15y6wp6bv5sqx0jwbiz9cxmik3w0"; depends=[caret dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; }; - scHOT = derive2 { name="scHOT"; version="1.2.0"; sha256="09j3fzr5ilyi6fmbrnzc0vhwr1m724hvimp18ic729dn6v1iaij9"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scMAGeCK = derive2 { name="scMAGeCK"; version="1.2.0"; sha256="00jyr868m892ys5l44s5nygfib7gffj6npyfri8lrdn1483d9ss9"; depends=[Seurat]; }; - scMerge = derive2 { name="scMerge"; version="1.6.0"; sha256="1545sr4k6p8y1nldkw5cyc330cv4mvbw1i0pcw52h4qm0ymndl77"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr igraph M3Drop pdist proxy ruv S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scPCA = derive2 { name="scPCA"; version="1.4.0"; sha256="070iacizxqpf4sn3872g137vxiv83baa3nfhk9f5pxygd17jx3x2"; depends=[assertthat BiocParallel cluster coop DelayedArray dplyr elasticnet kernlab Matrix matrixStats origami purrr Rdpack RSpectra sparsepca stringr tibble]; }; - scPipe = derive2 { name="scPipe"; version="1.12.0"; sha256="04yw75k9lyiwim5d0bh27lvim5png01y1hj27vd1d27zjl1mrija"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hash magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib rlang robustbase rtracklayer S4Vectors scales scater SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; - scRecover = derive2 { name="scRecover"; version="1.6.0"; sha256="1za3lwvm3f3lnmqdr1y4x6r9j8sz4sw9w30k3dj3imz96n39s9a0"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl Rmagic rsvd SAVER]; }; - scRepertoire = derive2 { name="scRepertoire"; version="1.0.0"; sha256="1j42cznsrjhzshq66vjhp9fz6937bh01pm4zzc1m66azrib5kb7h"; depends=[Biostrings colorRamps dplyr ggalluvial ggdendro ggfittext ggplot2 powerTCR RColorBrewer reshape2 Seurat SingleCellExperiment stringr SummarizedExperiment vegan]; }; - scTGIF = derive2 { name="scTGIF"; version="1.4.0"; sha256="0wz1pd3d6x3s2pkgd7amycdxzqz4ay1s2xv117h65r1d2vdamwx9"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; }; - scTHI = derive2 { name="scTHI"; version="1.2.0"; sha256="0744pykbzja9k14a8vd1z2r8737g9rbhflnhpj0kdyy9gk81xqzs"; depends=[BiocParallel Rtsne]; }; - scTensor = derive2 { name="scTensor"; version="2.0.0"; sha256="1v1pyminy5wglidd1siv9yby199jh01pqn9pmpsq3l32c5bzd9w7"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; }; - scater = derive2 { name="scater"; version="1.18.6"; sha256="0k1ls5gqv1zsn1w2kszhmbhwfccfjw8khk36s5zbf90rbbkw5609"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 gridExtra Matrix rlang S4Vectors scuttle SingleCellExperiment SummarizedExperiment viridis]; }; - scde = derive2 { name="scde"; version="2.18.0"; sha256="04da0w6n2yhf6k55blbbzk80lh96987169vjz75b9i7fj4ms857w"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; - scds = derive2 { name="scds"; version="1.6.0"; sha256="044bp86ghdcw6i2yq48dll5dcd3hajjsw6j3m2m8r6wlpy0vgc6j"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; }; - schex = derive2 { name="schex"; version="1.4.0"; sha256="092299dbj73gp5ndnw40vim803sm789wirw19h8v5n3sy0j0zy2i"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin scales Seurat shiny SingleCellExperiment]; }; - scmap = derive2 { name="scmap"; version="1.12.0"; sha256="1sbi1rgpss8irrs95988cncncs028j5cx1da45rgghid8ykcx1fk"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scmeth = derive2 { name="scmeth"; version="1.10.0"; sha256="1qrgdzy2dricbfrx7z91mq3w833wb4c1pj5ghqdwig3gpyzqk6vj"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; - scone = derive2 { name="scone"; version="1.14.0"; sha256="1lnyxcrw3kn5gi3n59dwdhkqps58cjxfknsjsj53qz5rv8iiqz73"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; - scoreInvHap = derive2 { name="scoreInvHap"; version="1.12.1"; sha256="117402mvc58xz3hdcy2369m9b547nm65489r3l84nvbbk5j3pdvj"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; - scp = derive2 { name="scp"; version="1.0.0"; sha256="0dn7i57l1f567w272dq7680cki4f2w5m81hnlaclxcck47mfxr7k"; depends=[dplyr magrittr MultiAssayExperiment QFeatures rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scran = derive2 { name="scran"; version="1.18.7"; sha256="0hsr58b7xj2cqdkyjdpzyifg5wrl1lbylq2h91zbjh5861qjv2n4"; depends=[beachmat BH BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix Rcpp S4Vectors scuttle SingleCellExperiment statmod SummarizedExperiment]; }; - scruff = derive2 { name="scruff"; version="1.8.3"; sha256="1k1m0hxyhxrk22vbl30kjf7360hc3g7n7835m079bj6cm006pk2m"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; - scry = derive2 { name="scry"; version="1.2.0"; sha256="0b6k47kvbcvh6qh2ar9hh7kmaqk29ssn8hllq56kw0r3fxyk9vva"; depends=[BiocSingular DelayedArray glmpca HDF5Array Matrix SingleCellExperiment SummarizedExperiment]; }; - scuttle = derive2 { name="scuttle"; version="1.0.4"; sha256="0vfhxyv81y525qgk0s3bxy1yypj16h1bl7sc1a1jdqx11fxxv2l8"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats GenomicRanges Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.24.0"; sha256="11z71v0lk3icflxgyygh7bzskla62wml16mb8mvjz4ih3k1y0cxs"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - selectKSigs = derive2 { name="selectKSigs"; version="1.2.0"; sha256="126r2n8kikal3hi5dyfrx8qdm0g51h6gpkvhfm1ld95k3vd3w0v3"; depends=[gtools HiLDA magrittr Rcpp]; }; - semisup = derive2 { name="semisup"; version="1.14.0"; sha256="0wvshixl23c8rybj2wgsm0zz2fdgqn6r42dr9f12n4ydgr1lbrja"; depends=[VGAM]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.22.0"; sha256="1s7dxa4wrz5kdgjnvp31kq0ayyhh3280gm7p3462vf5fpysr21bk"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCAT = derive2 { name="seqCAT"; version="1.12.0"; sha256="0f2ysjjy4zxlbvrc53zxqbvahm8rbwrvy9yfpqyhj5sz4hwld16z"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; - seqCNA = derive2 { name="seqCNA"; version="1.36.0"; sha256="06ncqcl7ga4bx5gg5nhgslgjjs2ir08qz2bgc2s4d7akwnd3qxks"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; - seqLogo = derive2 { name="seqLogo"; version="1.56.0"; sha256="02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1"; depends=[]; }; - seqPattern = derive2 { name="seqPattern"; version="1.22.0"; sha256="0j68n6fwycxjpl2va5fw7ajb123n758s2pq997d76dysxghmrlzq"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; - seqTools = derive2 { name="seqTools"; version="1.24.0"; sha256="0fd7wjkbgjrflrsjzzwsbvdk36jv58b0b8qvz5c0wddnaz7kbvvb"; depends=[zlibbioc]; }; - seqbias = derive2 { name="seqbias"; version="1.38.0"; sha256="1m634sidmk6c603k2gflyiddkns9vr6ij591nmab523xk5r2f4b2"; depends=[Biostrings GenomicRanges Rhtslib]; }; - seqcombo = derive2 { name="seqcombo"; version="1.12.0"; sha256="08lprg0jhq6ha03w6qf44f80lz3xc8j08acakspg03x9ykvrv1ys"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; - seqplots = derive2 { name="seqplots"; version="1.27.0"; sha256="0lj0fr25kcr5yn0cdiwqc70kh0jxqvzdjy4lr1wdvmli3h8f8jbl"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; - seqsetvis = derive2 { name="seqsetvis"; version="1.10.0"; sha256="1xrn7pjf68ny3jqzz4kynvxcbi7cwjbn5dxmms3zpjvp72rjll08"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma pbapply pbmcapply png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - sesame = derive2 { name="sesame"; version="1.8.12"; sha256="1w4qggplpmm4xfgrxksxnh7k1b304jq71illhiqv1vwdab3hbjqq"; depends=[BiocParallel DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS matrixStats preprocessCore randomForest S4Vectors sesameData stringr SummarizedExperiment tibble wheatmap]; }; - sevenC = derive2 { name="sevenC"; version="1.10.0"; sha256="13ycqnz0g92rxkws6q4yspy2kyc50swfy35f17w10j927d2a2lg4"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.20.1"; sha256="1xw37jv0i52rdqsfhqzjz8xy36f562g8v9j13d802dsccxs5w76m"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.26.0"; sha256="13dcpddwxb2f5w5qwnvb2awhfqhz2jsynbcb7czvrm3kw1b47hv2"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; - shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.28.0"; sha256="1kadivjy752crkl9vi2kbp9ksqbpqm6n5j8fkr5mlx1w7b1frzyn"; depends=[mixtools shiny xtable]; }; - sigFeature = derive2 { name="sigFeature"; version="1.8.0"; sha256="13jcdn1fy38nk92xda7bvglxb4p9fh1fqb0nby42ywl3nz3cg639"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; - sigPathway = derive2 { name="sigPathway"; version="1.58.0"; sha256="1fkw0ss471pllqxyjyif5lr35cr8sqpx31x0ccjp85lm3blws72l"; depends=[]; }; - siggenes = derive2 { name="siggenes"; version="1.64.0"; sha256="08wi2i6pqx06v13533y3mpli5fb637h0xfwcwy67ya9j2ygypv7w"; depends=[Biobase multtest scrime]; }; - sights = derive2 { name="sights"; version="1.16.0"; sha256="1p4ncgrfwfprn5qc8dhpc3lxjyw3qnr7ckj0k6jvrisryzx0cglp"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; - signatureSearch = derive2 { name="signatureSearch"; version="1.4.6"; sha256="169r768x1xpgrn9kjafq506xirkfsqql8vxispbxnb8c93azjzpq"; depends=[AnnotationDbi BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp reactome_db readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; }; - signeR = derive2 { name="signeR"; version="1.16.0"; sha256="0xvzc961mf78vxmds0dnwkm9z1sfsh8cpv36snlfrp1wbds2hl80"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; - sigsquared = derive2 { name="sigsquared"; version="1.22.0"; sha256="17ik5as6z2qw8s7c1721p0s9bnqin8smv5qw2p8hm23qk102jswh"; depends=[Biobase survival]; }; - similaRpeak = derive2 { name="similaRpeak"; version="1.22.0"; sha256="0dy019zzyynpsjl6fvkwykqi4pk0k3dy30l64hfwnmvhy5prjpr2"; depends=[R6]; }; - simpleaffy = derive2 { name="simpleaffy"; version="2.66.0"; sha256="04a11dsqd5y4b39nny94acnh0qhdazjc6d1803izza4vrgmw2csb"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simplifyEnrichment = derive2 { name="simplifyEnrichment"; version="1.0.0"; sha256="1bgdvmjwgvrv0fjxifnazrm3x2yxvp3d1cv9hjnrw4073r91k5kv"; depends=[AnnotationDbi BiocGenerics circlize clue cluster ComplexHeatmap digest GetoptLong GO_db GOSemSim Matrix org_Hs_eg_db proxyC slam tm]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.24.0"; sha256="0dinl5m33hwykf0kbzj5dg7kriy3bhkq5rh5q3wkg4nbbplagzvg"; depends=[Biobase BiocGenerics gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.22.0"; sha256="1na3pxqx3cxy9mh9v7lmlz1nrcmkfhz7i7b98mbmlj26rm15gr83"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - singleCellTK = derive2 { name="singleCellTK"; version="2.0.0"; sha256="0sgx80qx9a1kf1d634yci6m33gp5pi21vffs2rincbilxj8832y0"; depends=[AnnotationDbi ape batchelor Biobase BiocGenerics BiocParallel celda circlize cluster colorspace colourpicker ComplexHeatmap cowplot data_table DelayedArray DelayedMatrixStats DESeq2 dplyr DropletUtils DT enrichR ExperimentHub fields ggplot2 ggplotify ggrepel ggtree gridExtra GSEABase GSVA GSVAdata igraph kableExtra KernSmooth limma magrittr MAST Matrix matrixStats msigdbr multtest plotly R_utils RColorBrewer reshape2 reticulate rmarkdown ROCR Rtsne S4Vectors scater scDblFinder scds scMerge scran scRNAseq Seurat shiny shinyalert shinyBS shinycssloaders shinyFiles shinyjqui shinyjs shinythemes shinyWidgets SingleCellExperiment SummarizedExperiment sva TENxPBMCData uwot withr yaml zinbwave]; }; - singscore = derive2 { name="singscore"; version="1.10.0"; sha256="1k4p5b8hkhgnrk81jkhc83fapkxb4wzipwfh4jafqmhmcmnd866r"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; }; - sitePath = derive2 { name="sitePath"; version="1.6.6"; sha256="1f7szv8pcdvngrfhs0xbhsvw9wf649d6v5qgaw6mkjyvnc3lz31i"; depends=[ape aplot ggplot2 ggrepel ggtree gridExtra RColorBrewer Rcpp seqinr tidytree]; }; - sizepower = derive2 { name="sizepower"; version="1.60.0"; sha256="1xszmlm4yakdwwh64f1z54bdy8x3mwh1f0gdvyhrh5admnmmxra3"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.22.0"; sha256="1x5nljxq52higdgfgv1ga7amcl53yv7kwmhrvrmp4ad60rvnziln"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; - slalom = derive2 { name="slalom"; version="1.12.0"; sha256="1ddjyrwjrg3rq8f9wvkmx4sa1m5wdgzxy88yhrf6zvd6qgj57sxf"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; - slingshot = derive2 { name="slingshot"; version="1.8.0"; sha256="0sz4frlk7c1g8adyfcgi1mf1xsf9n5zib4bw7j9kl711dbhvkqwl"; depends=[ape igraph matrixStats princurve SingleCellExperiment SummarizedExperiment]; }; - slinky = derive2 { name="slinky"; version="1.8.0"; sha256="1dflkximva1m1c02j3r9105c81za2n1nb0y41pflw3sfy5ylrknw"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; - snapCGH = derive2 { name="snapCGH"; version="1.60.0"; sha256="0k5y73zkf4lmnl27dqkrws6i5agdjr8lna1ii8cfxgjfppdkm7f5"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; - snapcount = derive2 { name="snapcount"; version="1.2.0"; sha256="1bbvb9z7023429rhxzhpjzvf6j739r8sbx7vsg0l65m9cyvxc273"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; }; - snifter = derive2 { name="snifter"; version="1.0.0"; sha256="1r1ymd68rrhdpzll994k08xg0mwqrm2qa06zk3rck3s51bbi6xzw"; depends=[assertthat basilisk reticulate]; }; - snm = derive2 { name="snm"; version="1.38.0"; sha256="11864fg62wl318xzlpfmhlj6bgxcbzf9vhwqm27srsjjds5dkwp5"; depends=[corpcor lme4]; }; - snpStats = derive2 { name="snpStats"; version="1.40.0"; sha256="1298a71swwav53yf9kfqkdpach3818plqcbw0lgb6sibs8y8ff24"; depends=[BiocGenerics Matrix survival zlibbioc]; }; - soGGi = derive2 { name="soGGi"; version="1.22.0"; sha256="1sp93fhhk8caknb88336mhqk14jn1ivdiph8g3lrss899rgi6013"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - sojourner = derive2 { name="sojourner"; version="1.4.2"; sha256="09yp7yxrv8gz6rxb81m6262ykx9bi1s3nvww6g4x53aw7s2swfgy"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang sampSurf scales shiny shinyjs sp truncnorm]; }; - sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.14.0"; sha256="00fy86lzvdjvcd1vz8pk7j4j07kdfl7v08hr8pdj8bmslkyldajs"; depends=[MASS MCMCpack optparse tmvtnorm]; }; - sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.2.1"; sha256="01gnmy9zqd0ygm40vqkmqmiwfqmdawj4m81dysmmcdm7z80rn9ii"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; }; - sparsenetgls = derive2 { name="sparsenetgls"; version="1.8.0"; sha256="18wnm5q4ycmgl9vvnsfglqbfgbnpv7rn4dd5c64p6h219cbr8791"; depends=[glmnet huge MASS Matrix]; }; - spatialHeatmap = derive2 { name="spatialHeatmap"; version="1.0.0"; sha256="1wrisbmar5535zqwqljnaj578ja7xy006wbj2qi9mdr9gg84lkb1"; depends=[av DESeq2 dynamicTreeCut edgeR flashClust genefilter ggdendro ggplot2 ggplotify gplots gridExtra grImport htmlwidgets igraph plotly rols rsvg shiny shinydashboard SummarizedExperiment visNetwork WGCNA xml2 yaml]; }; - specL = derive2 { name="specL"; version="1.24.0"; sha256="0iph266rdsbcvvrs90bnzj49576vnrxc0lv75v9szs5dfa9hqwxw"; depends=[DBI protViz RSQLite seqinr]; }; - spicyR = derive2 { name="spicyR"; version="1.2.1"; sha256="0pwshbrj4q1ivxjabf0q9pki1a9bfyn6swnqjzmnjbpcjw40rks0"; depends=[BiocGenerics BiocParallel concaveman data_table dplyr ggplot2 IRanges lme4 lmerTest mgcv pheatmap rlang S4Vectors spatstat_core spatstat_geom tidyr]; }; - spikeLI = derive2 { name="spikeLI"; version="2.50.0"; sha256="134x43n70jyc1xsinjv7brn687h3pzqav82vamk2xdvis4zsaax2"; depends=[]; }; - spkTools = derive2 { name="spkTools"; version="1.46.0"; sha256="0v78dw4yvchldm49yx56r2gwk1fxy56j6r5mgfiqn0lzh4xw5295"; depends=[Biobase gtools RColorBrewer]; }; - splatter = derive2 { name="splatter"; version="1.14.1"; sha256="1bwqr13wgw74vh89qpcccgmr945w1qhs3i1cyxzndsahkbq2fgq7"; depends=[BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; - splineTimeR = derive2 { name="splineTimeR"; version="1.18.0"; sha256="10la4n15mymm1ac4p5kkn6xw3g7i26yylbws7xgw147ny6x1i8lr"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; - splots = derive2 { name="splots"; version="1.56.0"; sha256="19g57dsvwnm8c913wn0pz8wfvr6a376kcrhbb7rk12ca642n9clq"; depends=[RColorBrewer]; }; - spqn = derive2 { name="spqn"; version="1.2.0"; sha256="11jzmpsxc8d59l1hhilsiddfxzjq3m3bpg4lr6r7g2wv6g38w2rd"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; }; - srnadiff = derive2 { name="srnadiff"; version="1.10.1"; sha256="154pn428dn0i45h5jwvaks9hvkjf1vdangvwdxh13r05bvdxrwbj"; depends=[BiocManager BiocParallel BiocStyle DESeq2 devtools GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - ssPATHS = derive2 { name="ssPATHS"; version="1.4.0"; sha256="1y22c6vswchcl242sszrz5gary0i00zzngd2msm3c0gx13kvn0ip"; depends=[dml MESS ROCR SummarizedExperiment]; }; - sscore = derive2 { name="sscore"; version="1.62.0"; sha256="16x9yzkz2v81agxgg0q1zlflrnqqnfk7qqz94y662xd5g6dcn1qz"; depends=[affy affyio]; }; - sscu = derive2 { name="sscu"; version="2.20.0"; sha256="00v8z8ypj6ssk7qmg97klczrfz1lsw3i8y28p7jn8q7iym1kip5p"; depends=[BiocGenerics Biostrings seqinr]; }; - ssize = derive2 { name="ssize"; version="1.64.0"; sha256="0bygj6pds2nsbxxnx86ca6484b20ywspbv7d891ms23bsrz7p5wf"; depends=[gdata xtable]; }; - ssrch = derive2 { name="ssrch"; version="1.6.0"; sha256="0dxmwb0xrdc3hv33h4jr4fsfbybjl69940l1bfwglq7ip8nvg5cj"; depends=[DT shiny]; }; - ssviz = derive2 { name="ssviz"; version="1.24.0"; sha256="1pi3mm4xbna6pawhdx38bmjbbq0wipm69xh9lqa3ma34069jxxkn"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; - staRank = derive2 { name="staRank"; version="1.32.0"; sha256="0kqw9rp00z6g65jb80ypb3801sqdcvv7nafclmajrhrzdp109hc2"; depends=[cellHTS2]; }; - stageR = derive2 { name="stageR"; version="1.12.0"; sha256="18c84a9iwl1vzsnz0wj4g6f0dkxzvxxc7dvb94grnqd7vcspjzmm"; depends=[SummarizedExperiment]; }; - statTarget = derive2 { name="statTarget"; version="1.20.0"; sha256="0c5wg2fyrzaqjw6xi2hypfyy9ffy677p6vavhdwdf7yf7qahk552"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; - stepNorm = derive2 { name="stepNorm"; version="1.62.0"; sha256="0afdy09xjshlmyyzmhpzhxvqlbccccivs2dkc1vb6h9q2jj2qisc"; depends=[marray MASS]; }; - strandCheckR = derive2 { name="strandCheckR"; version="1.8.0"; sha256="1z92xxbhf7a037dwhnqgnidk79i1iw260s543zalrydf336qd0gf"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - struct = derive2 { name="struct"; version="1.2.0"; sha256="0xw9ajm5n47qi6d2n4km37p963acijk7s2b76ig649zil5092nkd"; depends=[knitr ontologyIndex S4Vectors SummarizedExperiment]; }; - structToolbox = derive2 { name="structToolbox"; version="1.2.0"; sha256="1cpqfy3hhkv21kmxa55dd6yn2gi5vqch0c8dnxs5i511p9q9bq81"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; }; - subSeq = derive2 { name="subSeq"; version="1.20.0"; sha256="1yvzx5rygbwvkcva4kcac5rain4sflwyxkl535azndqs1qacdmvy"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.28.2"; sha256="1wxx4f1bfmhvbfnc69i9hh7nhjsm8g0mlxf3h13gc997l9376q52"; depends=[ape dplyr hexbin igraph magrittr MASS purrr readr stringr tibble tidyr]; }; - survcomp = derive2 { name="survcomp"; version="1.40.0"; sha256="05nn7jrapcc3zk2vbrdmpyb6jiqq4p0asadc6dbbg80v5n0cga20"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - survtype = derive2 { name="survtype"; version="1.6.1"; sha256="05q72hkgbxw4la2ni443a2r63jn9sn2dpmnfbanc1k43w6kx6f3r"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; }; - sva = derive2 { name="sva"; version="3.38.0"; sha256="1hpzzg3qrgkd8kwg1m5gq94cikjgk9j4l1wk58fxl49s6fmd13zy"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; }; - swfdr = derive2 { name="swfdr"; version="1.16.0"; sha256="139zg731r01jwwswlqnha1k97np5rm0w93rwx73v3yzamk0n85gr"; depends=[]; }; - switchBox = derive2 { name="switchBox"; version="1.26.0"; sha256="10n3msrwcv58swcgf6pdsxpx6acy7sd875qmdjgj9457rv6mqd9r"; depends=[gplots pROC]; }; - switchde = derive2 { name="switchde"; version="1.16.0"; sha256="07fk7gfd6g57j7xb081rjw248gj8g216vccx42aql4djywg4p6qx"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; - synapter = derive2 { name="synapter"; version="2.14.0"; sha256="058glxas17cs59l11ws8fnipbd771y6b5bkk92y7ky8p7b4bj14p"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; - synergyfinder = derive2 { name="synergyfinder"; version="2.4.16"; sha256="0nrd5zxrf28j7ash9pabnz2ky4av0hr0k2rwhg14scz6x8ci3zzg"; depends=[dplyr drc furrr future ggforce ggplot2 ggrepel gstat kriging lattice magrittr metR mice nleqslv pbapply plotly purrr reshape2 sp SpatialExtremes stringr tidyr tidyverse vegan]; }; - synlet = derive2 { name="synlet"; version="1.20.0"; sha256="0aya9wlh0lg82cv8l47hvhqa6zdvmzh5p8ir9gh1mh1fmhfw4qr9"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.24.6"; sha256="05qnn105gm423fka4kb84vpgzjmz1py6mxpfa2agwwmc5v012qbp"; depends=[annotate assertthat batchtools Biostrings DESeq2 DOT edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats IRanges limma magrittr pheatmap rjson Rsamtools rsvg ShortRead stringr SummarizedExperiment VariantAnnotation yaml]; }; - systemPipeShiny = derive2 { name="systemPipeShiny"; version="1.0.20"; sha256="0pcr163k1i6mrmi7cdm3k02l46xh3lkjpqdg0cax54bnxzq0xgfr"; depends=[assertthat bsplus crayon dplyr drawer DT ggplot2 glue magrittr plotly rlang rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyFiles shinyjqui shinyjs shinytoastr shinyWidgets spsComps spsUtil stringr styler tibble vroom yaml]; }; - tRNA = derive2 { name="tRNA"; version="1.8.0"; sha256="1fl5c77cz1iygyv5zvn5asm4w7x4bd4b575m1200zkpamlpxidz1"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; }; - tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.8.0"; sha256="1zgalf1bx8ylfcydjbyg4wcmj0hhpzn7lf3dqwrw3d7z68brjcy7"; depends=[BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; }; - tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.10.0"; sha256="0qrwyk6k5mbz5jac0gg9va0hayh7m84kx073ywphwaasljpp6wla"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.28.0"; sha256="0ws6wmf6f9b8bfhmikqca8bnichx0marz0bniqxcpy6dk3z26r8a"; depends=[anota Biobase edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; - target = derive2 { name="target"; version="1.4.0"; sha256="1xbk35a8x3w2jrmbrjhxbm14x14w9hxqw2vpc4biqma6ax6sybrs"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; }; - tenXplore = derive2 { name="tenXplore"; version="1.12.0"; sha256="11jk6xa5if9iwkvf5nc58j4lm7dj6qvqsk12d7n5ci3c1naxzwd5"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; - ternarynet = derive2 { name="ternarynet"; version="1.34.0"; sha256="029n29z1y4wsc24hvqhbx9fqrxpplvaz39rniibrwjr0nac9gjn5"; depends=[igraph]; }; - tidySingleCellExperiment = derive2 { name="tidySingleCellExperiment"; version="1.0.0"; sha256="1nxcdrjghikvdwfjiirnrvck5f2fr13vh9qlcyqr56krr4jbcbqw"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors SingleCellExperiment stringr tibble tidyr tidyselect]; }; - tidySummarizedExperiment = derive2 { name="tidySummarizedExperiment"; version="1.0.0"; sha256="0yfv6zjlc908dmddw9r9zjj1rld2n4wianwvc24i383dhgr901ys"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect]; }; - tidybulk = derive2 { name="tidybulk"; version="1.2.1"; sha256="0vp4nvk8d27clh4nkddj15awzfdd9j60fdps36zdg5lzjqc412sj"; depends=[dplyr lifecycle magrittr preprocessCore purrr readr rlang scales stringr SummarizedExperiment tibble tidyr]; }; - tigre = derive2 { name="tigre"; version="1.44.0"; sha256="06jj0hjjn8iqfqdfpp5bbkd5mqwmvrf8pns86ncbzjpjd9h6jfmq"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; - tilingArray = derive2 { name="tilingArray"; version="1.68.0"; sha256="089sqin78rqy53mjzwahm1jnxjaw2l4qc7bzgg1lhsvf0y9ldqgz"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; - timeOmics = derive2 { name="timeOmics"; version="1.2.0"; sha256="0fc3g0p02wahssskj56c2f8kgz4ix5jdlyksfwla38gxgznsngvr"; depends=[dplyr ggplot2 ggrepel lmtest magrittr mixOmics propr purrr stringr tibble tidyr]; }; - timecourse = derive2 { name="timecourse"; version="1.62.0"; sha256="0zwsgdbf1861zkfi05rxykbm1k1himgg3hfaxrkk9wa55g938bxv"; depends=[Biobase limma marray MASS]; }; - timescape = derive2 { name="timescape"; version="1.14.0"; sha256="14fyailm0i6wsm2jwa57q30a6vy1s1xlwicnbd5kn5c2wkdai7ng"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; - tkWidgets = derive2 { name="tkWidgets"; version="1.68.0"; sha256="1vqgrzz85d0i38g6cd8kghi7b1a8v4i0nfxlqsgjd18rsnhjpwyi"; depends=[DynDoc widgetTools]; }; - tofsims = derive2 { name="tofsims"; version="1.18.0"; sha256="07h5vz27mpvgjqhdmdn3hi36xi0x0g4ljsqi7rbidm614f2w24ng"; depends=[ALS alsace KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; - tomoda = derive2 { name="tomoda"; version="1.0.0"; sha256="1hqraav10ag3cw4j6ynq7pinkvs8xzr0n2yizk6lmy6y7db9mwa9"; depends=[ggplot2 ggrepel RColorBrewer reshape2 Rtsne SummarizedExperiment umap]; }; - topGO = derive2 { name="topGO"; version="2.42.0"; sha256="0vr3l9gvd3dhy446k3fkj6rm7z1abxi56rbnrs64297yzxaz1ngl"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; - topconfects = derive2 { name="topconfects"; version="1.6.0"; sha256="01679vrs3iwdcpclfdr7i2znl0n5pmp8wpw8rdk5c54x20w4znin"; depends=[assertthat ggplot2]; }; - topdownr = derive2 { name="topdownr"; version="1.12.0"; sha256="1ridl9a3bwx952abwgn4b3ihd1nw1fhi50wpy8zjz9cww5z2zah7"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; - trackViewer = derive2 { name="trackViewer"; version="1.26.2"; sha256="10gpl2n0cly0bi0pjw8kqg7mf16dibc451gsw1ry4cvvh7mra1fd"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; - tracktables = derive2 { name="tracktables"; version="1.24.0"; sha256="1ny6yvj1c19gqk0zc0cf6xjdq9in9km1fz2j7sw89nsrdjvlzahz"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; - tradeSeq = derive2 { name="tradeSeq"; version="1.4.0"; sha256="1ncmvn9kaksismvsjs042xsp8bfq1xnm0ds87dwpk95bnpj96a89"; depends=[Biobase BiocParallel edgeR ggplot2 igraph magrittr Matrix matrixStats mgcv monocle pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble viridis]; }; - transcriptR = derive2 { name="transcriptR"; version="1.18.0"; sha256="1rclir0fss5ln38jn1i9kggbnq7amqsfn3wlhmgv854pkgiv61hz"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; - transcriptogramer = derive2 { name="transcriptogramer"; version="1.12.0"; sha256="03rh2pypsrwls500vjv11nwmd179bg016y4chfr176cygskn66sf"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; - transite = derive2 { name="transite"; version="1.8.0"; sha256="1z1j9nm6ykqrivhvz1y4543rrksq499zhmfjanm6prbaisw21wnh"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; - transomics2cytoscape = derive2 { name="transomics2cytoscape"; version="1.0.0"; sha256="1m5zjp9n753qyb93p293m22hd9r260ncm20bpnjfgghiabl2fyr8"; depends=[dplyr KEGGREST RCy3]; }; - traseR = derive2 { name="traseR"; version="1.20.0"; sha256="02sv8dsd6z154wi39fq8hhnicw4sf1gk3n27l179c4sxh6svf58z"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - treeio = derive2 { name="treeio"; version="1.14.4"; sha256="1x8m5mazlz6wvyzn3hvwsyfz3ma6s5sq3ig2k8qh9039sla0irsy"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; }; - trena = derive2 { name="trena"; version="1.12.1"; sha256="0jasvlnzkv2a5mnkzmmzmqrl822dpj5q6bf7h6m2z9i2p42xp60d"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr xgboost]; }; - trigger = derive2 { name="trigger"; version="1.36.0"; sha256="0cdb7sq2w188jdqvml045d3yjr535jpbnvbllnlkpi1vrdlmcqir"; depends=[corpcor qtl qvalue sva]; }; - trio = derive2 { name="trio"; version="3.28.0"; sha256="0vh4xsp766vjigklqz6hlbh2a1l2bpg8r0mn3zj483v5pfqrmbnh"; depends=[LogicReg siggenes survival]; }; - triplex = derive2 { name="triplex"; version="1.30.0"; sha256="0mmz4ahkkqfdy6yswsng2kpiy456wg1a09gnvqjail5dp08si4pm"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; - tscR = derive2 { name="tscR"; version="1.2.0"; sha256="1f2lbnldb07ls1nf6aahgh7xc4b9r7aq66plzrvang2jwpzcijyh"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges kmlShape knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; }; - tspair = derive2 { name="tspair"; version="1.48.0"; sha256="0qjy7zvnz5v71jv11sk3pjlycv5ajzalr0c5w4mcvvc43lyj9151"; depends=[Biobase]; }; - tweeDEseq = derive2 { name="tweeDEseq"; version="1.36.0"; sha256="1gzd0wlr3jyvvcxrybxh4yxd3591vpzwr25bkfz81bqj3lmq9f67"; depends=[cqn edgeR limma MASS]; }; - twilight = derive2 { name="twilight"; version="1.66.0"; sha256="1ca2mfppjdmj04s71vmnxjqva2i0d4gj8sm3l1kv0packd7nl15d"; depends=[Biobase]; }; - twoddpcr = derive2 { name="twoddpcr"; version="1.14.0"; sha256="05wa20jrf3mzli95xmivsvd10j82i05hdfqddjnral540v4jr8ki"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; - tximeta = derive2 { name="tximeta"; version="1.8.5"; sha256="0ki1rl43df9yx99h0yivj8nhwq6bkhzlvb15crfckxivivp0dmwr"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; - tximport = derive2 { name="tximport"; version="1.18.0"; sha256="1nxnlvl4iv2392xa72j0lzy2xnb3vrvyhfrdj9l54znwkrryyq34"; depends=[]; }; - uSORT = derive2 { name="uSORT"; version="1.16.0"; sha256="075p35g4jbiky769db6rvz7y6spi1qs3j8j2yqnyk9lyi9qk2qy4"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; - uncoverappLib = derive2 { name="uncoverappLib"; version="1.0.0"; sha256="0v3idx22qizcwd8xyxd0cjnnsbwxwrb1hks403bbyyk002x2j9ij"; depends=[BiocFileCache BSgenome_Hsapiens_UCSC_hg19 condformat DT EnsDb_Hsapiens_v75 EnsDb_Hsapiens_v86 GenomicRanges Gviz Homo_sapiens markdown openxlsx org_Hs_eg_db OrganismDbi processx rappdirs rlist Rsamtools shiny shinyBS shinycssloaders shinyjs shinyWidgets stringr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.26.0"; sha256="1ad5a7gy43l8x1rf5lgqiy2bv6fgah7cbnp4lrqwshphlnr30ndv"; depends=[BiocGenerics HTqPCR]; }; - universalmotif = derive2 { name="universalmotif"; version="1.8.5"; sha256="07862bs771xldmdnq0zr8926dr299ach8nrgci14p5bbrc88l3ly"; depends=[BiocGenerics Biostrings ggplot2 ggseqlogo IRanges MASS Rcpp RcppThread Rdpack rlang S4Vectors yaml]; }; - variancePartition = derive2 { name="variancePartition"; version="1.20.0"; sha256="0fisaqd5v8xy9rz9l1zs62k1n2h4k1irzgwj46ci947l52x1qhah"; depends=[Biobase BiocParallel colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; - vasp = derive2 { name="vasp"; version="1.2.4"; sha256="1gl0xdlw51an3ir6hgjqjjbbyfwa9lyqy0330xyii83lfyiqyadw"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; - vbmp = derive2 { name="vbmp"; version="1.58.0"; sha256="16my3zfhj14fv7wzc4s0wzffvkgnjv29ndv4jshl5zw4l7hkaxga"; depends=[]; }; - velociraptor = derive2 { name="velociraptor"; version="1.0.0"; sha256="1cnxxa5lffmhjxzifa163kbayxpnibln44vzmjgrzli422fxfysa"; depends=[basilisk BiocGenerics BiocParallel BiocSingular DelayedArray Matrix reticulate S4Vectors scuttle SingleCellExperiment SummarizedExperiment zellkonverter]; }; - vidger = derive2 { name="vidger"; version="1.10.0"; sha256="19bjrgwgfgrzdv0p06fwqdxj3lwmbadij89pwga6288qq1xlwpvx"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; - viper = derive2 { name="viper"; version="1.24.0"; sha256="17fk1a42hkdp25g2m50dhlgbzfvm666v7fjx29ylqia6rbfs98ai"; depends=[Biobase e1071 KernSmooth mixtools]; }; - vsn = derive2 { name="vsn"; version="3.58.0"; sha256="0dfrfflidpnphwyqzmmfiz9blfqv6qa09xlwgfabhpfsf3ml2rlb"; depends=[affy Biobase ggplot2 lattice limma]; }; - vtpnet = derive2 { name="vtpnet"; version="0.30.0"; sha256="096s73kk46bpavmp0kv54k3l0mcw2kqw6saci4w10daqxah7bqgv"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - vulcan = derive2 { name="vulcan"; version="1.12.0"; sha256="0rynj1y2vdwc9wkz5rzsza9ip9sjwcdz7cx9hw16296gln3rdczn"; depends=[Biobase caTools ChIPpeakAnno csaw DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; - waddR = derive2 { name="waddR"; version="1.4.0"; sha256="13gm4nlla4qwfqfah12p5rb6hmlgk3zkb0k25ampj8x9rbkyhxhv"; depends=[arm BiocFileCache BiocParallel Rcpp RcppArmadillo SingleCellExperiment]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.34.0"; sha256="1sc2nxg9bafpvlwqhky2p5b6fkimkk9v3xcab9kvwnj6szrb6p3f"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.24.0"; sha256="18cg0jbr3rjyx31wwyag1n5gams55pbd2rvb99i3g80q9hvswawi"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; }; - weaver = derive2 { name="weaver"; version="1.56.0"; sha256="18b4q7m917na2zfdv0gn1gh6zvb3q92gxmrx2br9v48zzm3nygl4"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.62.0"; sha256="1nnmr4ddi07x7sy89fgdn7iwz5k4l8n5ca3xjnlbpwxycza793vj"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; - weitrix = derive2 { name="weitrix"; version="1.2.0"; sha256="0wjwxwarqfax8fm0nbgmmmw2zfj3vv45lgap89cg88zxcd5zwck3"; depends=[assertthat BiocGenerics BiocParallel Ckmeans_1d_dp DelayedArray DelayedMatrixStats dplyr ggplot2 glm2 limma purrr reshape2 RhpcBLASctl rlang S4Vectors scales SummarizedExperiment topconfects]; }; - widgetTools = derive2 { name="widgetTools"; version="1.68.0"; sha256="172f0pmsspd9lss557cmxzjfsbansimjyhwdiahg8pqrayhwvf2w"; depends=[]; }; - wiggleplotr = derive2 { name="wiggleplotr"; version="1.14.0"; sha256="1k4wlh5ayb1w4dr6dydqfgm3415qhsfmshmi6zjyyhhkd2626vad"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; - wpm = derive2 { name="wpm"; version="1.0.0"; sha256="1hhjycqqn4g0ig672dy0760khzv36c6wsffkjpwd3fbm5kzdlrdz"; depends=[Biobase cli config dplyr DT ggplot2 golem logging RColorBrewer rlang shiny shinycustomloader shinydashboard shinyWidgets stringr SummarizedExperiment]; }; - xcms = derive2 { name="xcms"; version="3.12.0"; sha256="17kyybj093mj0g2sbfmjp19mmkww4w025n6zc0hbznqb94vkc8fv"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MsCoreUtils MSnbase mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors SummarizedExperiment]; }; - xmapbridge = derive2 { name="xmapbridge"; version="1.48.0"; sha256="08k57pywggpsyi913cv68qdjszhl73qr50misbgsg5xcq0zklxji"; depends=[]; }; - xps = derive2 { name="xps"; version="1.50.0"; sha256="1drcbg22zks5payr2gcy7mxs63ic48bxs18dwz7807dm25qlja73"; depends=[]; }; - yamss = derive2 { name="yamss"; version="1.16.0"; sha256="0cxzn7j9apjcabbvvii16kn4whwd9khcyz867w5ag3zdxwvg7l7w"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; - yaqcaffy = derive2 { name="yaqcaffy"; version="1.50.0"; sha256="18gphcjj15iivrahp52186bvdg07yd2dvrykfjdd4r1vyf33im96"; depends=[simpleaffy]; }; - yarn = derive2 { name="yarn"; version="1.16.0"; sha256="0p8wz5jn601vxbbxkm73ps3fx0j1y56nr2qf6y8k80vgrk7bv5gp"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; - zFPKM = derive2 { name="zFPKM"; version="1.12.0"; sha256="1sa7m7mzzr92c9ickial5701414rab233lq1il1sm9yfdkf8s9fm"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; - zellkonverter = derive2 { name="zellkonverter"; version="1.0.3"; sha256="0np73kmcqj2i1rg0cdk7bpka5f6fjsfzal580f0wigzrjngryjra"; depends=[basilisk DelayedArray Matrix reticulate S4Vectors SingleCellExperiment SummarizedExperiment]; }; - zinbwave = derive2 { name="zinbwave"; version="1.12.0"; sha256="0m5f0wrk6kg88m41cchjwi4ssi7kr3196m8h9hrhygak964nsd4q"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; - zlibbioc = derive2 { name="zlibbioc"; version="1.36.0"; sha256="0m36ddss0znvm19dhnxcclxjhgjplw8ajk8v419h20ab8an6khxg"; depends=[]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.22.0"; sha256="15v5n6d3mnj9d86swkh9agfvrsd065dldaywm1adwmkhhk525wmd"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; + ABSSeq = derive2 { name="ABSSeq"; version="1.46.0"; sha256="17vnyck6bf39g2ax9zx41pp7hbdz08n7jb81whmmfb3spv31w7qj"; depends=[limma locfit]; }; + ABarray = derive2 { name="ABarray"; version="1.60.0"; sha256="15x05x45psy4a80p7nk8ylwkdy31q503jifpl6v74nmdlnbkhsw2"; depends=[Biobase multtest]; }; + ACE = derive2 { name="ACE"; version="1.10.0"; sha256="0nl8xczyldl5nwx2lh6p8bhznc110849frlippqjczgf992clj5b"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; }; + ACME = derive2 { name="ACME"; version="2.48.0"; sha256="1p7z17990kcc33i59l0r34p920as4l3jc21a0flp8f7prr2hdfkg"; depends=[Biobase BiocGenerics]; }; + ADAM = derive2 { name="ADAM"; version="1.8.0"; sha256="12m44jlnw1gd0c5rx0mayr10xkrmwiidv8jd51m4p5ni5r3012a2"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; }; + ADAMgui = derive2 { name="ADAMgui"; version="1.8.0"; sha256="18nikr1slrqk4c0ks0b833mzs9ms1p1j52ywvrrvfj6qazgzqdbs"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; }; + ADImpute = derive2 { name="ADImpute"; version="1.2.0"; sha256="0pj1i0nm6cd1200fzgyf5xx9mrh6iin51rl8m06k1yhrqbb6ixkw"; depends=[BiocParallel checkmate data_table DrImpute kernlab MASS Matrix rsvd S4Vectors SAVER SingleCellExperiment SummarizedExperiment]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.32.0"; sha256="0r92bks74y57jb0w388rd9sbjmrlwlgramyai129ba8lcrzf1mpv"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + AGDEX = derive2 { name="AGDEX"; version="1.40.0"; sha256="0ly39k0347dhxaqkw9fphxy8v5d0dd4zalb0jyxmzfa7zckgnw45"; depends=[Biobase GSEABase]; }; + AIMS = derive2 { name="AIMS"; version="1.24.0"; sha256="0i31fw9w4qf37nclxgd4dnlrrjw3hdj5aal66pl88xpigg8lcjzx"; depends=[Biobase e1071]; }; + ALDEx2 = derive2 { name="ALDEx2"; version="1.24.0"; sha256="17g231s6fmxswfkb540sjmmw4qkq0c4r2l1wsgxdn12h0dbiy60l"; depends=[BiocParallel GenomicRanges IRanges multtest Rfast S4Vectors SummarizedExperiment zCompositions]; }; + ALPS = derive2 { name="ALPS"; version="1.5.0"; sha256="1aydvzc6x0871iasij68xqdlhjyg69qbqxm0qh1q52w8gj2nyq3p"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + AMARETTO = derive2 { name="AMARETTO"; version="1.8.0"; sha256="0q0f4j52iildrli04y34m2nm6x4x4h0gzqs0mjaqc8al7cqm8pp5"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; }; + AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.18.0"; sha256="1iyr1lzig3arrwc0gb5n35v487jgqnbzvx8c7xvb6ji1qfpsfa1d"; depends=[]; }; + ANCOMBC = derive2 { name="ANCOMBC"; version="1.2.2"; sha256="0wd3y9i1y2ji9s6s108ibkfdjwvq96jm22lrbwbshyh2vc5q35l7"; depends=[MASS microbiome nloptr phyloseq Rdpack]; }; + ANF = derive2 { name="ANF"; version="1.14.0"; sha256="0fam3qrik5n51rcm4rm89fyq718wjswfr11dmsvhiyfdb7m25471"; depends=[Biobase igraph MASS RColorBrewer survival]; }; + APAlyzer = derive2 { name="APAlyzer"; version="1.6.0"; sha256="0rvfgdvlr8qlb3c4wb0l3yyffky0z04ijpal7krqbz8f6w5ynv1j"; depends=[DESeq2 dplyr ensembldb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel repmis Rsamtools Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; }; + ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.32.0"; sha256="0ni3vblcadhwxaq1pf1n9jn66cp3bqch68ww4c8zh19zagil2y7r"; depends=[ARRmData]; }; + ASAFE = derive2 { name="ASAFE"; version="1.18.0"; sha256="1833d7zncd86f8fmpqdmr0w9rgccy9d8s79qmg6zg6fhdkbka4qh"; depends=[]; }; + ASEB = derive2 { name="ASEB"; version="1.36.0"; sha256="0hda532m9wpgc3zv2q96cgrjnhsy5an04h5x7pddydkc8yl9hlli"; depends=[]; }; + ASGSCA = derive2 { name="ASGSCA"; version="1.26.0"; sha256="172v87hx1kagy4qh5w8vn823kx96xjcgfzdpf738n7z92pyianrc"; depends=[MASS Matrix]; }; + ASICS = derive2 { name="ASICS"; version="2.8.0"; sha256="0dxby6g9vpkxql6vz0v7h4272jxnpcjnh344i4wpw9pgkpnflhy8"; depends=[BiocParallel ggplot2 glmnet gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; }; + ASSET = derive2 { name="ASSET"; version="2.10.1"; sha256="15xigwd92qmp2xvfc0s8z66jmb8mrf13dlcifgy284hpa8wpnh2c"; depends=[MASS msm rmeta]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.28.1"; sha256="1zb70vylpwwvnkmk6z5pars81hk9nxsnp45aq8pv4wl8y7v2mvha"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; + ASpediaFI = derive2 { name="ASpediaFI"; version="1.6.0"; sha256="1gjl3hm8hjva29b7hf0z4a993rng9x9f78v9hjhd9zj7s2jbdnpx"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix mGSZ reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; + ASpli = derive2 { name="ASpli"; version="2.2.0"; sha256="16l86v7i3gvpb722rym7yynz3yslbz5qm73hyaqfp6yhim78sq9b"; depends=[AnnotationDbi BiocGenerics BiocStyle data_table DT edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz htmltools igraph IRanges limma MASS pbmcapply Rsamtools S4Vectors tidyr UpSetR]; }; + ATACseqQC = derive2 { name="ATACseqQC"; version="1.16.0"; sha256="168g3xkhjzrfjpa1ynifdyfhsxx3rpyrbybsarlzr9kslw1cdkxl"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; + AUCell = derive2 { name="AUCell"; version="1.14.0"; sha256="0qdac3qalcki20r90k40cc8d0lfywzn9pffg9d719yvs7nrsfdjr"; depends=[BiocGenerics data_table GSEABase mixtools R_utils S4Vectors shiny SummarizedExperiment]; }; + AWFisher = derive2 { name="AWFisher"; version="1.6.0"; sha256="0s529rb3m4jhns0r1qgydsdqa25317zdr1djvwbfbkvb4s6bqndb"; depends=[edgeR limma]; }; + AffiXcan = derive2 { name="AffiXcan"; version="1.10.0"; sha256="1rff9hj74rv7wz4fngq64yrml3n3k6jry7ng4sdiv10s3xbdjgp7"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; }; + AffyCompatible = derive2 { name="AffyCompatible"; version="1.52.0"; sha256="1xwz22wf2smsvmd0d5lfadbsgscnl3fl9msypy2mml38k048p6vj"; depends=[Biostrings RCurl XML]; }; + AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.38.0"; sha256="1dsx5kk1b86cx59p5x81c78qpbxri0q5fh7f2c61lkqd0rd2vakk"; depends=[affy]; }; + AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.42.0"; sha256="0q47fpg02a50qpv6r3vqvbyy5d7gp2k2nq7qbb643g4ihphxhz5x"; depends=[affy affycoretools Biobase limma preprocessCore]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.30.0"; sha256="1mn6975npncmfjlpjs3s2pgsrm32xgvnyl2vh1922l6vra97dkrc"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AlphaBeta = derive2 { name="AlphaBeta"; version="1.6.1"; sha256="0gmh6bi7s27d0cpq6vnszbpzc9jpy75bmdymgix0zz28cky0ky99"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; }; + AlpsNMR = derive2 { name="AlpsNMR"; version="3.2.3"; sha256="1cx6b8fq6w1nxi6wazm65k3q2fah37xh6ng0y9hs69kj0nblnyy1"; depends=[assertthat baseline BiocParallel dplyr fs furrr future GGally ggplot2 ggrepel glue htmltools magrittr matrixStats mixOmics pcaPP plyr purrr readxl reshape2 rlang rmarkdown S4Vectors signal speaq stringr SummarizedExperiment tibble tidyr tidyselect vctrs writexl zip]; }; + AnVIL = derive2 { name="AnVIL"; version="1.4.1"; sha256="11vc09fbzk6m6l3wfn4nmksx2fd7jq066af71av8sk6vifg6119f"; depends=[BiocManager dplyr futile_logger httr jsonlite rapiclient rlang tibble tidyr tidyselect]; }; + AnVILBilling = derive2 { name="AnVILBilling"; version="1.2.0"; sha256="04bq4bwy8gy7ibjkfqx5r2k3qpchx0gg6x1rn3s5b2ij6bdabbaj"; depends=[bigrquery DBI dplyr DT ggplot2 lubridate magrittr plotly shiny shinytoastr]; }; + AnVILPublish = derive2 { name="AnVILPublish"; version="1.2.0"; sha256="0biz57cn1lq9hbk8vg47fa8xx00prxrc0ml90a1ssx9yj5gcfgng"; depends=[AnVIL httr jsonlite rmarkdown whisker]; }; + Anaquin = derive2 { name="Anaquin"; version="2.16.0"; sha256="1d9bn904ii15zdvkgrkv87an2j21k3f7iph6rwl0nfqx3v52i1k6"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.20.0"; sha256="0m6wphlriq7y21ih1p2kzml5jzcic79jc52kkk59dkjj8j88yllk"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.54.1"; sha256="0fcammls431pgmp47r85k0zh3bz42bajbqdmafd31kpqncc1ijal"; depends=[Biobase BiocGenerics DBI IRanges KEGGREST RSQLite S4Vectors]; }; + AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.16.0"; sha256="0799jja6v7l3jsi26wbjalkr5lriaxid05xb5g36iq93myhaj0sa"; depends=[GenomicRanges lazyeval]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.34.0"; sha256="1by3diy0y4809k97cw97mp4j177gn1dzhqil8myij1r7b8sk7hax"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="3.0.1"; sha256="12i8lafy1z97gs4knqi7r5l1hd7dr6j8a23qj4fkdpqsdpyz21z7"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.22.0"; sha256="0jnh3d8v00xxnqcfmzhha75fai9cr1lrjm153i1cy2z9mi31rzr1"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocCheck BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges jsonlite OrganismDbi RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.52.0"; sha256="0ivmy1zfxagk29ss8vjl2nj6mjsab9l6ddmpji7s3ay4fqmppji5"; depends=[Biobase limma oligo XML]; }; + ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.42.0"; sha256="1v6ifl5vz2d4kxhbqp7fj3lwi6jffk0ngjy3kpqbj0la5wjpy93n"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; + AssessORF = derive2 { name="AssessORF"; version="1.10.0"; sha256="09m4naw8x2fd6nzyk1l17qhj1xgxl5da05s9gi80shdp29ka35gi"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; + Autotuner = derive2 { name="Autotuner"; version="1.6.0"; sha256="030iaqrd6flfydv1lpzwmf10p4bcy9m40i96xd9q08mjzvc05fa4"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; }; + BAC = derive2 { name="BAC"; version="1.52.0"; sha256="1pf7910gi09k3yrz4byn5mhf3r2g19aal7nlzsya9b5z6wdnl7hb"; depends=[]; }; + BADER = derive2 { name="BADER"; version="1.30.0"; sha256="0a00qawc0hsiifq6z3psj0kk5xwxmj7vs8gpw6hya5kzgldci64c"; depends=[]; }; + BAGS = derive2 { name="BAGS"; version="2.32.0"; sha256="0m6fjakkzfhl99hykbgdqid36q5wnyydkibjqxrdcr9bkn0m1x9q"; depends=[Biobase breastCancerVDX]; }; + BANDITS = derive2 { name="BANDITS"; version="1.8.0"; sha256="1a3v0b1ls58d91chfj5d11vj1xfh0dkm1n6cin6x21z77vzxcsvx"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; }; + BASiCS = derive2 { name="BASiCS"; version="2.4.0"; sha256="18mywqr5x1v9wjj5csp31ycfvi968akcxr011bqxkdlxa8s71lxz"; depends=[assertthat Biobase BiocGenerics BiocParallel coda cowplot ggExtra ggplot2 hexbin MASS Matrix matrixStats Rcpp RcppArmadillo reshape2 S4Vectors scran scuttle SingleCellExperiment SummarizedExperiment viridis]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.22.0"; sha256="11l2z18mdr0b7fcbggixj7zk7015akpw4aj1g8qqfbfpq6l0ry6x"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BCRANK = derive2 { name="BCRANK"; version="1.54.0"; sha256="1l2ij4948w022129pvk1y1ajn3x2dmvjz7pd6bzpyiggs2mcvkw7"; depends=[Biostrings]; }; + BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.10.0"; sha256="1y86sw3x82355d9jx14kxwlpzswz8a5r5p26ky8b62jfp70dy2lq"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; }; + BEARscc = derive2 { name="BEARscc"; version="1.12.0"; sha256="08zpd4mcsz6hfr2dbhv1bg470ai6bjhnqk06i1d5dysad7k4fhfm"; depends=[data_table ggplot2 SingleCellExperiment]; }; + BEAT = derive2 { name="BEAT"; version="1.30.0"; sha256="0r9am053n1jc9wdqp8ri4c2nf41c75mj7sr3j1i08x9zd46kp47z"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; + BEclear = derive2 { name="BEclear"; version="2.8.0"; sha256="0w18livng2gcmjgvws7pix3gsnj237rs34sgwxsfmn8p5vfx8b30"; depends=[abind BiocParallel data_table futile_logger Matrix outliers Rcpp Rdpack]; }; + BGmix = derive2 { name="BGmix"; version="1.52.0"; sha256="1gp40ddspblpszzm4k4r7ysgx883iwdfqc5ds23p2q1ml9idwgvv"; depends=[KernSmooth]; }; + BHC = derive2 { name="BHC"; version="1.44.0"; sha256="0aaawm7h3ppyyhd7hi14rpynagnxx4730f5vxizj5bpzwbclp6h9"; depends=[]; }; + BLMA = derive2 { name="BLMA"; version="1.16.0"; sha256="0qbsffivgsrizksxxnzb63w8zk10vkhsbhnip83pssh1sx5ikf02"; depends=[Biobase graph GSA limma metafor PADOG ROntoTools]; }; + BPRMeth = derive2 { name="BPRMeth"; version="1.18.0"; sha256="1mrh2fkz2iihvqmarp4k7ghgk4lnjfqlvchg72hf8mndi137f6s5"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; + BRAIN = derive2 { name="BRAIN"; version="1.38.0"; sha256="04y0dmgag8748nps3lzkff98bm3gkxi901jld8ns9f55d6nrr7x4"; depends=[Biostrings lattice PolynomF]; }; + BRGenomics = derive2 { name="BRGenomics"; version="1.4.0"; sha256="0vjr4yk7dynpfndmr1diw63g9arxyxb9x2y80km14wk2b57907l0"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + BSgenome = derive2 { name="BSgenome"; version="1.60.0"; sha256="1jhissp9ad1rn2p0bzr3yslbn84yqbaqgnn5p9hyacwr7mr091cn"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; }; + BUMHMM = derive2 { name="BUMHMM"; version="1.16.0"; sha256="1nqk14f7rkwdl3p0nixlpsxd4i6jf5wdsrz61w22afvsz401ppa6"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; + BUS = derive2 { name="BUS"; version="1.48.0"; sha256="14i9wqf5dlidxkga56zfafmqga0pq4qsfwb91jnqyszwn2hkhnlb"; depends=[infotheo minet]; }; + BUScorrect = derive2 { name="BUScorrect"; version="1.10.0"; sha256="0nnsqcds2z2b290g76fhw598ivpan0nnv51d19l9b8jvfnqcmqhw"; depends=[gplots SummarizedExperiment]; }; + BUSpaRse = derive2 { name="BUSpaRse"; version="1.6.1"; sha256="0dkbh4pnpmwrhjrgfqnsrbc2hj8rgb5wr1vlb67yvrqvxapqpi54"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; }; + BaalChIP = derive2 { name="BaalChIP"; version="1.18.0"; sha256="0zdd0xc16m9kf8wzf9xj03g4smdrpykjsja0pd5438ji0q30zhp4"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.20.0"; sha256="05sbmb8f012p027n7wpajv0irh45pkmwrh5g1i2ycg6h581j1g8l"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.36.0"; sha256="02d679rkf5qvgpgi1chp57b1j23q3xqh5x8677h0d5b9z1l0pcrz"; depends=[RCurl RJSONIO]; }; + Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.28.0"; sha256="1bcnnprpaabrpbbyw0kmlbhphp320qv5apsf935libv9gsam3029"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; + BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.20.0"; sha256="0cnigjid1yl191pihjg22yzfgqhw8flx6p32vjib09fvpib4pamh"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; + BatchQC = derive2 { name="BatchQC"; version="1.20.0"; sha256="052h7wjwn4p2asbmpinwwi350x7hwrsbxxk0kigjg3mld7qvf5q5"; depends=[corpcor ggvis gplots heatmaply knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.18.0"; sha256="126pm9l51fdza9090xqs3q21rwlz3fbzfn9p3p3071wzd4p7vpn6"; depends=[Biobase]; }; + BayesSpace = derive2 { name="BayesSpace"; version="1.2.1"; sha256="0r4406gxpknrf8nzxjsiilyys81d1sb8zcn2i7x30gbfskaxhdwz"; depends=[assertthat BiocFileCache BiocSingular coda DirichletReg ggplot2 Matrix mclust purrr Rcpp RcppArmadillo RcppDist RcppProgress RCurl rhdf5 S4Vectors scales scater scran SingleCellExperiment SummarizedExperiment xgboost]; }; + BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.44.0"; sha256="1fn7c4135y1yxg3dvsqrax98bcrl6f1vbdhqxdv206ijyz07wvcg"; depends=[]; }; + BgeeCall = derive2 { name="BgeeCall"; version="1.8.0"; sha256="1byciy7vzbdkdgaim10s9qb7zlxsywbhcsrka31gm0rm9ljqc665"; depends=[biomaRt Biostrings data_table dplyr GenomicFeatures jsonlite rhdf5 rslurm rtracklayer sjmisc tximport]; }; + BgeeDB = derive2 { name="BgeeDB"; version="2.18.1"; sha256="1ziq180yfpdqwhjdzkwjjhwzn3kb0gkj6q0a26c7a30mcfb50w11"; depends=[Biobase curl data_table digest dplyr graph R_utils RCurl RSQLite tidyr topGO]; }; + BiFET = derive2 { name="BiFET"; version="1.12.0"; sha256="1fwy7ws0bn67557s0kcw8pbln2jg834n6kfbs8297ps07nxr0lpj"; depends=[GenomicRanges poibin]; }; + BiGGR = derive2 { name="BiGGR"; version="1.28.0"; sha256="1y9659pxm65w51zvrz36girb3qvfc64zijjkxmg6xn4pbc8vv1wf"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.24.0"; sha256="0p6mr67mkw54490sv4dvkyh8l0xkpjfbqy532vi8l41i40qg3gry"; depends=[igraph Matrix slam tsne]; }; + BiSeq = derive2 { name="BiSeq"; version="1.32.0"; sha256="17wdjm3pshd7mq3ppgpm85vnpca2lj8xihlhjsmqcyhl5kvq7dfp"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; + BicARE = derive2 { name="BicARE"; version="1.50.0"; sha256="0j3gs4xcdgaca2c62jf2h86skbbxm1c9g2khs5bsa8fmkskr6vl9"; depends=[Biobase GSEABase multtest]; }; + BioCor = derive2 { name="BioCor"; version="1.16.0"; sha256="135rga7mwpzy8ypvriqpbmlh9l5yf61s9s1sa9615qfab14jh06b"; depends=[BiocParallel GSEABase Matrix]; }; + BioMM = derive2 { name="BioMM"; version="1.8.0"; sha256="0daqlm04bywl202msbrsfl8ddlksqmfkpnxvwxhzpxyjd7aagbvh"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet imager lattice nsprcomp precrec ranger rms topGO vioplot xlsx]; }; + BioMVCClass = derive2 { name="BioMVCClass"; version="1.60.0"; sha256="04pld93nffbci47dnf0awmcmhlfzv599ggcd7hvq78w41ac60qv8"; depends=[Biobase graph MVCClass Rgraphviz]; }; + BioNERO = derive2 { name="BioNERO"; version="1.0.4"; sha256="1yj0pavyfrj2gsvaj1dkgmznibm2appxjx9rk5qjslhslmm5b05b"; depends=[BiocParallel ComplexHeatmap DESeq2 dynamicTreeCut GENIE3 ggnetwork ggnewscale ggplot2 ggpubr igraph intergraph matrixStats minet NetRep networkD3 RColorBrewer reshape2 SummarizedExperiment sva WGCNA]; }; + BioNet = derive2 { name="BioNet"; version="1.52.0"; sha256="15rk1jfv4h1mxvr5bs0qmq6fdnza7zcmksigqxb46fs7f6znr3yi"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; + BioNetStat = derive2 { name="BioNetStat"; version="1.12.0"; sha256="16xlfng9m8xvm831c2x6zmjc0gavlfiy9pnza55hdv86888fcnbg"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr markdown pathview pheatmap plyr psych RColorBrewer RJSONIO rmarkdown shiny shinyBS whisker yaml]; }; + BioQC = derive2 { name="BioQC"; version="1.20.0"; sha256="04akp94p0d0zid55m1b1k3qlw7iq914pcg57lihgj3pa92n1sc5l"; depends=[Biobase edgeR Rcpp]; }; + BioTIP = derive2 { name="BioTIP"; version="1.6.0"; sha256="1i6r8px0fmdjx8frpljppwql74mhx08ibvhs9y3qk91ck5h3f0js"; depends=[cluster GenomicRanges Hmisc igraph MASS psych stringr]; }; + Biobase = derive2 { name="Biobase"; version="2.52.0"; sha256="1sg8w8860zhlz9s1pf75xa8asd2hyqsj13fh5xc37hf5yqdfkavr"; depends=[BiocGenerics]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.28.0"; sha256="1h0l5w33c9jpc20pynq634qmx8jbfa802d7jslmf4haljmrxm4a1"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; + BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.4.0"; sha256="0dh1flm5chsdcihljrg6znjskqkp0qyjh39hsv4zq0frf1rm97j7"; depends=[dplyr httr memoise readr whisker]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="2.0.0"; sha256="0ymg4hmabk233qgassld62achjylm12rnidxbakfkx4dvvlbhxxv"; depends=[curl DBI dbplyr dplyr filelock httr rappdirs RSQLite]; }; + BiocGenerics = derive2 { name="BiocGenerics"; version="0.38.0"; sha256="1kv7lzmyki3hi771v01nml1v1hzz8pyhqqv0xcdzqy354mlgx4m6"; depends=[]; }; + BiocIO = derive2 { name="BiocIO"; version="1.2.0"; sha256="0skwnpxl6fkqihidpqrfzzh7b05x11j6jwkiinmhggmv0ggjb5ph"; depends=[BiocGenerics S4Vectors]; }; + BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.10.0"; sha256="0cjidi18wjip9xzx83890wjk40vvjq06prf1ag4m2kac47w01r7v"; depends=[BiocParallel Matrix Rcpp RcppHNSW S4Vectors]; }; + BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.12.1"; sha256="1ix09a39z7y2cj0y8qsd66ka8a8y8q79w08l4jv1yhhn9h4va89s"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.26.2"; sha256="1y459cygq21f3igsdlxz1zlyad8qbl2qlr5h2d2dpnvblykvf48i"; depends=[BH futile_logger snow]; }; + BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.10.2"; sha256="1sfp1nxlwbbbpx2iwvyk9p10jdy2vxhgn2b5fy5blayzjjlb3d80"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr RBGL readr rlang rvest stringr tibble tidyr tidyselect xml2]; }; + BiocSet = derive2 { name="BiocSet"; version="1.6.1"; sha256="0nmrg9cgq8l9w467y364jghnvym05abpj8pyj90grmrib2xc5sj2"; depends=[AnnotationDbi BiocIO dplyr KEGGREST ontologyIndex plyr rlang S4Vectors tibble tidyr]; }; + BiocSingular = derive2 { name="BiocSingular"; version="1.8.1"; sha256="16gkwq8fb8jdchpnlzq2hz3i74a6pzbnc1bf93282h11mp7qr58l"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors ScaledMatrix]; }; + BiocSklearn = derive2 { name="BiocSklearn"; version="1.14.1"; sha256="148qck2g2b7ic15iin4ga18qcmf5x1snnhpin9cfy4yyw3nzipyi"; depends=[basilisk knitr Rcpp reticulate SummarizedExperiment]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.20.2"; sha256="0p2wdq5vrx63ndghl9ww428z2lwnv5y88xmcr51by2g6vcj3brcf"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; + BiocVersion = derive2 { name="BiocVersion"; version="3.13.1"; sha256="0rsw8g4g1pcjw1zbx8x17yd3drhxqk4sx3cy3ddzy5731hl6mbfi"; depends=[]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.18.0"; sha256="1a32bwgnxaw0gv2gij2p4rm0a6l06jjhidvfz2v4k900pz1w79av"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; }; + Biostrings = derive2 { name="Biostrings"; version="2.60.2"; sha256="0ai0fg0w4l0a7avbafdbqjgjpg91myxalwrg2i3ixm1l2lyyfyah"; depends=[BiocGenerics crayon GenomeInfoDb IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.36.0"; sha256="08nkxi1071bd1i7f82af52bawllhmqxf38nmq35drcqzvraz16mm"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; }; + BloodGen3Module = derive2 { name="BloodGen3Module"; version="1.0.0"; sha256="0rfmb9jkn4qdi3bp9hxczbgypyar46l5s8k9d7y60jlj2dp0rrv4"; depends=[circlize ComplexHeatmap ExperimentHub ggplot2 gtools limma matrixStats preprocessCore randomcoloR reshape2 SummarizedExperiment testthat V8]; }; + BrainSABER = derive2 { name="BrainSABER"; version="1.2.0"; sha256="05bhqjkjm3qhs0daj11jbhn5l5sd7x7pznzh7vfmahmjcdlr9s0w"; depends=[BiocFileCache biomaRt data_table lsa S4Vectors SummarizedExperiment]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="2.2.1"; sha256="1np0img4dkhlq0y781frww1i558na1jq416jg5kj2i6pq367a3h8"; depends=[curl rJava]; }; + BrowserViz = derive2 { name="BrowserViz"; version="2.14.1"; sha256="1ifhfsxqi9x62wc19w850z9wqrm9dyq7yxcdd4fk51cql3cxn1b9"; depends=[BiocGenerics httpuv jsonlite]; }; + BubbleTree = derive2 { name="BubbleTree"; version="2.22.0"; sha256="1bm175yl1m8ir6n06rzahr41sa4k2qnnz04n0srq39q9dnjfj4qm"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; + BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.56.0"; sha256="01yh2cnxvmca4hipg5r4byzn6jfvm6rdpzfp6fy2hdc4ag4v61qb"; depends=[]; }; + BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.56.0"; sha256="1qfqigpsjmzszmwzip1iaw039c34byh35hhaa7xib27ismbk69kz"; depends=[BufferedMatrix]; }; + BumpyMatrix = derive2 { name="BumpyMatrix"; version="1.0.1"; sha256="01z3a548dp62q6d1pwp4r009ky3x2561y43a9s3xpf0vh40qz09x"; depends=[IRanges Matrix S4Vectors]; }; + CAEN = derive2 { name="CAEN"; version="1.0.0"; sha256="0b5xdxw1nz79ifz397izkzz0d3a4jh4mykzbskjvqzakhv4sxs03"; depends=[PoiClaClu SummarizedExperiment]; }; + CAFE = derive2 { name="CAFE"; version="1.28.0"; sha256="1zxl5v17f1pd4mrxhf2hkalr71iasiwydvgs90m4w2cjqlyvcdxa"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEfightR = derive2 { name="CAGEfightR"; version="1.12.0"; sha256="05qn060pbx90xgwp60jfvjgkv3q0sr5vsnnyxr63dnjr46dq6f18"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; }; + CAGEr = derive2 { name="CAGEr"; version="1.34.0"; sha256="1c3j1618kca94j8xi3zghfxzv1vi6syglk2ymkapqdg4dv9ji1yx"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; + CAMERA = derive2 { name="CAMERA"; version="1.48.0"; sha256="12267smsjdbp789cmxm31j3xh69q7pmi4hqq0k30f6br2icxdlxy"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; + CARNIVAL = derive2 { name="CARNIVAL"; version="2.2.0"; sha256="18jqanb7p8zylxvzp97s6zx1qbz5cl39jqllbz1v7k7pfayby580"; depends=[dplyr igraph lpSolve readr rjson rmarkdown stringr]; }; + CATALYST = derive2 { name="CATALYST"; version="1.16.2"; sha256="1vw8x54hwgcyn29k81zcvawawy2iy2qgp49gjpb830q04gx6yc6h"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra magrittr Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; + CAnD = derive2 { name="CAnD"; version="1.24.0"; sha256="0rgxcd62rxdy5ga0g82xdr370d3vlkmivs6xy2dp8zid2p0i5f6s"; depends=[ggplot2 reshape]; }; + CCPROMISE = derive2 { name="CCPROMISE"; version="1.18.0"; sha256="0zshwwhwacz3kbb23x8agz8xckyxlba3h4gfxxm6ff70l4xmy8nl"; depends=[Biobase CCP GSEABase PROMISE]; }; + CEMiTool = derive2 { name="CEMiTool"; version="1.16.0"; sha256="1xdhy5f7p9j527pawkdgcf9xhi0pwgwr2rgfrykl467grd13g8dr"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; + CFAssay = derive2 { name="CFAssay"; version="1.26.0"; sha256="1k4kdlw2nf3iliwnhh4sqk1803i945h5s3yiij12bqyv0psnzw1k"; depends=[]; }; + CGEN = derive2 { name="CGEN"; version="3.28.0"; sha256="1pv45malc3bjsz1vkrfw20q29gg9wj4ahvdc663zhfmd1ciba23a"; depends=[mvtnorm survival]; }; + CGHbase = derive2 { name="CGHbase"; version="1.52.0"; sha256="1p87k4vw981k97d9bckmprrfg55jwd91658rgxzjj8hnschf28a4"; depends=[Biobase marray]; }; + CGHcall = derive2 { name="CGHcall"; version="2.54.0"; sha256="1zik04y2q0anzy85l0b4ryzkxpfx2fnmpwp5s7akyk1jfl2r8gw7"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; + CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.46.0"; sha256="0x2gfay4xzql94lxn7n54xsbph8cq5rlb8jn5zi83v6cf6f4ymfk"; depends=[Biobase CGHbase CGHcall]; }; + CGHregions = derive2 { name="CGHregions"; version="1.50.0"; sha256="0gk7grck9va0773db3wyjgpsk8nkxsz6nbshqs1ymy9qls1i10vz"; depends=[Biobase CGHbase]; }; + CHETAH = derive2 { name="CHETAH"; version="1.8.0"; sha256="01mvlbgdiz8skx14bw1g7l2x2jz99gx4li2rm91fimwdwgfqhd3m"; depends=[bioDist corrplot cowplot dendextend ggplot2 gplots pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.20.0"; sha256="1mzy7v0xcldfz5aw8bdaia8aahcladay70537w335q51wgqzszh8"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl rJava XML]; }; + CIMICE = derive2 { name="CIMICE"; version="1.0.0"; sha256="1xms5x0hdci3m0vhb078ywwjgzzwp0zr1mnqs96q7jwp7398xy24"; depends=[assertthat dplyr ggcorrplot ggplot2 ggraph glue igraph maftools Matrix networkD3 purrr relations tidyr visNetwork]; }; + CINdex = derive2 { name="CINdex"; version="1.20.0"; sha256="16lmpcwlsqj1v84wqzk87hqd2p89n5mq5izpwf6rvv9smcw94df0"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CMA = derive2 { name="CMA"; version="1.50.0"; sha256="1zza675lrpisxq918f1aj8hfcy463mfwyl8iss9rfa0zdnymsybv"; depends=[Biobase]; }; + CNAnorm = derive2 { name="CNAnorm"; version="1.38.0"; sha256="10vlxkg0lww5vnm3lql9d4yn4pi09lcpvv681z6mbq86krl7jga0"; depends=[DNAcopy]; }; + CNEr = derive2 { name="CNEr"; version="1.28.0"; sha256="13w0gsfm7k29dp5nb0c9sb2ix506ph6dixsjis6xxcz6acq7lg2k"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.34.0"; sha256="0i062h7rvv86p2ab9iqgmv9352i47rlgdqxqwsmbmdaxv42xcsqi"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.32.0"; sha256="1gi50bfn7hkh5mcli8hnaasczw8dw41cnc60nhd30q6618dj4287"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.34.0"; sha256="1m4flyywlbjxr0wk9ws24ga3s3a72d8hs44dyzv2q7q2xq854aac"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.34.0"; sha256="0wknhgnckv3jvcbikhf8d6s8m14pgwqvywy38z590v362m4hyn8z"; depends=[CellNOptR genalg]; }; + CNTools = derive2 { name="CNTools"; version="1.48.0"; sha256="1lirzqmqdfzy350zjvyjd2fg682pqv7c2p01w26w5yihqfn5rap3"; depends=[genefilter]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.24.0"; sha256="0vwwh4yxw72hczql621fa9hpmh8i9sdnpx7x1rlm1h69c4rrwvjd"; depends=[BiocGenerics exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; + CNVRanger = derive2 { name="CNVRanger"; version="1.8.0"; sha256="0amp2p25ha0wjmd0bk14h0kwbgcf6n5v3ishby3j470nrrynq1sc"; depends=[BiocGenerics BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; }; + CNVfilteR = derive2 { name="CNVfilteR"; version="1.6.2"; sha256="17xv5rlz8avgb7ljfrww4ffi05142iwnavgz3h1w49m1b27112vl"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; }; + CNVgears = derive2 { name="CNVgears"; version="1.0.0"; sha256="1a07l4g01nkgfkpw8n80sjmxfwvjkp5zl28nz2mm4mgj8kd482xs"; depends=[data_table ggplot2]; }; + CNViz = derive2 { name="CNViz"; version="1.0.0"; sha256="1c5pxxyi5hvcd9pc3nlmwixnjr0iic7qm4cw3f84cw40sslrvzzq"; depends=[CopyNumberPlots dplyr DT GenomicRanges karyoploteR magrittr plotly scales shiny]; }; + CNVrd2 = derive2 { name="CNVrd2"; version="1.30.0"; sha256="03pa0y8rn3jsjw3c93182p4rf966sbn65nv1vywzvkdlraxi6jmi"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; + COCOA = derive2 { name="COCOA"; version="2.6.0"; sha256="1bm45k4c5ykyvwlzywb8kfwsml1b1pq0xh7q7jncgzmm9p0151zk"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; }; + CODEX = derive2 { name="CODEX"; version="1.24.0"; sha256="0kbmkbgdg16awqv8c5y8pcxyid0w05hb9wwv2ava4p0bcr22pfls"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; + COHCAP = derive2 { name="COHCAP"; version="1.38.0"; sha256="1pa4pd3j1x4s7150q91v8gbz2d43wh62lks1misff1fj8ipshd16"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.30.0"; sha256="0x2bsm3n4w24rn8mmyv0ximgxxk3dr1x1dcv6dmm5jh7a803jnln"; depends=[abind BiocStyle clue coda data_table dplyr foreach knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; + CONFESS = derive2 { name="CONFESS"; version="1.20.0"; sha256="1wh1wh7zss6hm7xh6gmxml9snashfl12c1xlxsgm4r30r2crivci"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + CONSTANd = derive2 { name="CONSTANd"; version="1.0.0"; sha256="0lbb47j79bsbb6m31x31b5n3cf0s5d8phgs245306kal0z8bxx7n"; depends=[]; }; + CORREP = derive2 { name="CORREP"; version="1.58.0"; sha256="071whnm5qx96hff158x6x22wxha6my2zaj37h1b9342jp54p5sjy"; depends=[e1071]; }; + COSNet = derive2 { name="COSNet"; version="1.26.0"; sha256="00x0pngb1m9r4mx531s2b2fb108ni59v7f8qirh76p0ar080rfsp"; depends=[]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.32.0"; sha256="016qhphif69m2z9g0blwmbd93gzf950r3ng7v4h6lcdg9pf7an22"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges reticulate rhdf5 S4Vectors seqinr]; }; + CRImage = derive2 { name="CRImage"; version="1.40.0"; sha256="18zb0jyrpm49g7wn1hgsj9dzp7s2mvfw4lnbqbj5qnz6nd6wv9wd"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; + CSAR = derive2 { name="CSAR"; version="1.44.0"; sha256="09sxx2wdwjqxvwfbjwqziq0dv28aw59gpxgs4dwyv9ygsq0zqs0w"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + CSSP = derive2 { name="CSSP"; version="1.30.0"; sha256="0j06zq2qyfsigcrdx024a4lfqb13yhxq9y489vqq4wah16bfcs5n"; depends=[]; }; + CSSQ = derive2 { name="CSSQ"; version="1.4.1"; sha256="0x96pj55kprfmw6zfib9i05yv2100ywadfglvmd5dhkfb2rmsaqw"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + CTDquerier = derive2 { name="CTDquerier"; version="2.0.0"; sha256="0nwfigg62whiif2dyp61npsnpkwrlydbq3vmnp3l8h3zswqqypg3"; depends=[BiocFileCache ggplot2 gridExtra igraph RCurl S4Vectors stringdist stringr]; }; + CancerInSilico = derive2 { name="CancerInSilico"; version="2.12.0"; sha256="027fbcg8laxd3zi2ppcliz29ly19din8pvfl7cak3kwv17rdbda4"; depends=[BH Rcpp]; }; + CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.18.0"; sha256="1bd8m959jbys8qkyr4z246highg5lfbn2gxah81ya2fk4fxn4jqa"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust survival]; }; + Cardinal = derive2 { name="Cardinal"; version="2.10.0"; sha256="1n6k8g1ln3m604hrfxzyfvfwn61kl4lq4kd2rk56fbdamyra8x79"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; }; + Category = derive2 { name="Category"; version="2.58.0"; sha256="0f76pb7h8qc51mca5pq00m9p02sbkcj6ywfzli20qai2ykpfr71x"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; + CausalR = derive2 { name="CausalR"; version="1.24.0"; sha256="0944av5ibrqwqd2915sm1zwv6kxqm3r1y06qz7j3v9wvj0cjj6hb"; depends=[igraph]; }; + CeTF = derive2 { name="CeTF"; version="1.4.5"; sha256="0x83h2ddllc26mhv0k94j3cgszmqdgz7cd8z9gf7l4is94nfs3kv"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 dplyr GenomicTools GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment WebGestaltR]; }; + CellBench = derive2 { name="CellBench"; version="1.8.0"; sha256="1bfgyz6ls8psihyhppdjwdfvhp27n71s7xp51j9pr76csdyqmkq6"; depends=[BiocFileCache BiocGenerics BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; }; + CellMapper = derive2 { name="CellMapper"; version="1.18.0"; sha256="12y40vz4580qd4jl7qr7da0srd00pahsbr4hz6vg5dnxx4ismvgf"; depends=[S4Vectors]; }; + CellMixS = derive2 { name="CellMixS"; version="1.8.0"; sha256="0k3i0gvqi06drzmr1q1xwlk7sd2zw63ribkz6r0f4qzw5v32063x"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.38.0"; sha256="0k63yvwg02ppn7c4axm46pcv668771ilza88i6gz1aljpp4h6csj"; depends=[ggplot2 graph hash igraph RBGL RCurl Rgraphviz stringi stringr XML]; }; + CellScore = derive2 { name="CellScore"; version="1.12.0"; sha256="1lmb7g9j2xd637swnqxrkjxrwn82nv2pxqlqkwi4b1saipjvpjhh"; depends=[Biobase gplots lsa RColorBrewer squash]; }; + CellTrails = derive2 { name="CellTrails"; version="1.10.0"; sha256="0gi8yksgaf068bka0n85dw8ccz9mbg6mrvipr6frlbxzapdj2v38"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; + CellaRepertorium = derive2 { name="CellaRepertorium"; version="1.2.0"; sha256="1505jfc8fnp2xrfr2fykwdm2hzadivgfy5440ynvzva8gkdnj1h2"; depends=[BiocGenerics Biostrings dplyr forcats Matrix progress purrr Rcpp reshape2 rlang S4Vectors stringr tibble tidyr]; }; + CelliD = derive2 { name="CelliD"; version="1.0.0"; sha256="1710f83w6hirn861qmnn2namicyy9738l2rryza1j5d33iv82rmj"; depends=[BiocParallel data_table fastmatch fgsea ggplot2 glue irlba Matrix matrixStats pbapply Rcpp RcppArmadillo reticulate Rtsne scater Seurat SingleCellExperiment stringr SummarizedExperiment tictoc umap]; }; + ChAMP = derive2 { name="ChAMP"; version="2.22.0"; sha256="1c3qls8bd6xq6gby962jj5p0niwsa7s3yxrpi15lsgvcdchq6d0w"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; + ChIC = derive2 { name="ChIC"; version="1.12.0"; sha256="0ii992knxs043h0yzwg04x1arcm9f30hphyk0brwar1irawhsh4i"; depends=[BiocGenerics caret caTools ChIC_data genomeIntervals GenomicRanges IRanges progress randomForest Rsamtools S4Vectors spp]; }; + ChIPComp = derive2 { name="ChIPComp"; version="1.22.0"; sha256="1kfxjh1mynrgqsy2q6byf03cbymqc8w7l7672iyd0wj5qzlif4h5"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.28.0"; sha256="05k9pln5yfq00i5qrcm7z5wyri827447pai7f6miqam4pc9npamg"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.36.0"; sha256="0b69c680y0x3h6rrsibyqvfb4py7lyidgw3qm6x9sf5l8jb8isbn"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.14.0"; sha256="1kd8aj3vsylr5xqiq25arf5x3zjfqz9r2x22vai2aj7dzlcj7mmf"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; + ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.16.0"; sha256="0fbrf5s6pz115djm7xw95k1d0p7svi40aacbb3d52wmx5azwj424"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.26.4"; sha256="1iqzm7pifl9zrw3s06i6h85n1p01pd06vh1a93izyfhgybxn262d"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI dplyr ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 graph InteractionSet IRanges KEGGREST matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.28.3"; sha256="18hdgml80770c0xgd06zrl8px1ql9fa65rirfkq07z7rzpnd23rw"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.46.0"; sha256="1mf51s05g0cg75yvp6k18lfwq8bs396xa3g7csbr93q8fgmjzl5q"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.46.0"; sha256="15ipz9s8yv1i4zk5szfm0y5c6iwlp54zx6xh0rjxa3v81vrvw0qb"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.30.0"; sha256="0hr8l3ccgys3hjb1f68ldv0yblblxyhr8f7fhnlpw4d7bi6akmsf"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="3.44.0"; sha256="1z59npqk7hnqzhjdnry6lfqlyxfzwqprp7bmbdzs4rp22pzcv1v8"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; + Chicago = derive2 { name="Chicago"; version="1.20.0"; sha256="0dkwy6pfvzd7g4qmhjl24ypn92l78w1zy0ajhcxgg39f7zsq883x"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; + ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.46.0"; sha256="0vxhnw52j0wq9qxdpphh9383g0sh4rkqqw91x83pnxvp8j349yh4"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; + ChromSCape = derive2 { name="ChromSCape"; version="1.2.62"; sha256="1l681lq3211ly4rkcipbwz207w2rg1djmzzxwpvxqwkyjq7drbya"; depends=[batchelor BiocParallel colorRamps colourpicker ConsensusClusterPlus coop DelayedArray dplyr DT edgeR forcats fs GenomicRanges ggplot2 IRanges irlba jsonlite kableExtra Matrix matrixTests msigdbr plotly qs qualV Rcpp rlist Rsamtools rtracklayer Rtsne S4Vectors scater scran shiny shinycssloaders shinydashboard shinydashboardPlus shinyFiles shinyhelper shinyjs shinyWidgets SingleCellExperiment stringdist SummarizedExperiment Sushi tibble tidyr umap viridis]; }; + CiteFuse = derive2 { name="CiteFuse"; version="1.4.0"; sha256="1id9lnfzvcpv4mvvxm5q7q0f1yv7qcgn4ipdzfn5hg6w5v0riid4"; depends=[cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap propr randomForest reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SummarizedExperiment uwot]; }; + ClassifyR = derive2 { name="ClassifyR"; version="2.12.0"; sha256="1w18m7q4p55kgzr7h0ikdkr9kk5ygvjcfqv12z5nawjv6hib58cv"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; + Clomial = derive2 { name="Clomial"; version="1.28.0"; sha256="01hxwqp29mmmz4f8ii8c7w2hzi44dkd86043dzsdvlywkqsw0130"; depends=[matrixStats permute]; }; + Clonality = derive2 { name="Clonality"; version="1.40.0"; sha256="0wzkidwl5gbr45f71ca4azhd2hgikvkf8nx759gilw51a63pvmd4"; depends=[DNAcopy]; }; + CluMSID = derive2 { name="CluMSID"; version="1.8.0"; sha256="0b9rfrzgaxhm0mrqfqqmbpkkdyy26n6c7y7ahn1r4kj56jfp7vpp"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; }; + ClusterJudge = derive2 { name="ClusterJudge"; version="1.14.0"; sha256="1zn4xv3sv7mb7bq7765qprgi67716sl4y7f7qq9q2pclsldqxn4q"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.20.0"; sha256="13zfji0fx16b62hswnpj0c0wwvb4sfd7lyymkc83nf0dnhws3qn0"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + CoCiteStats = derive2 { name="CoCiteStats"; version="1.64.0"; sha256="10jm5r6jq9vs4gm4h6jmrcdnxji03lr85i0ccpvc66k6svdqbnp1"; depends=[AnnotationDbi org_Hs_eg_db]; }; + CoGAPS = derive2 { name="CoGAPS"; version="3.12.0"; sha256="0smswyc948jz515h4nf36zhphvy4fv6glh74chji8bazhv5k17pa"; depends=[BH BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.30.0"; sha256="11zw1wy1zd3dw2swg6ccipwblj82xglkd6lmyxf60y1s70cbsxzq"; depends=[arules igraph shiny]; }; + ComPrAn = derive2 { name="ComPrAn"; version="1.0.0"; sha256="0cabgv8fi54flycax69pan8hcxrsaa9qk8ps0643xhhymqr0gdgx"; depends=[data_table dplyr DT forcats ggplot2 magrittr purrr RColorBrewer rio rlang scales shiny shinydashboard shinyjs stringr tibble tidyr VennDiagram]; }; + CompGO = derive2 { name="CompGO"; version="1.28.0"; sha256="16nlrk9wbxj51y8s7s58mdhpi70ghfacxi283406gwya3cm79f0n"; depends=[GenomicFeatures ggplot2 pathview pcaMethods reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.8.0"; sha256="0jl96msj1njdrvngg68s50vmphvhi2lfwlv34x07pcdzgkjjs41f"; depends=[Cairo circlize clue colorspace digest doParallel foreach GetoptLong GlobalOptions IRanges matrixStats png RColorBrewer]; }; + ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.56.0"; sha256="163nr50nyvwrsajmm0cgxp70pqk61mgw0k7ams694hcb42162j8b"; depends=[ALL Biobase cluster]; }; + CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.8.0"; sha256="0gza6a06jf161r88f4sm4l51qpb94x05wapy0750w76pv148blq9"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.24.0"; sha256="0pacs714d9b1fdz68pp9ca0x77d376s19lxb82np4l9fgx0rgkxp"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CoreGx = derive2 { name="CoreGx"; version="1.4.1"; sha256="10d85v3c3sf0h8ap49hz9lp81cmim1zx89svw95dpsa3ndi9rcs8"; depends=[Biobase BiocGenerics BiocParallel crayon data_table glue lsa MatrixGenerics MultiAssayExperiment piano rlang S4Vectors SummarizedExperiment]; }; + Cormotif = derive2 { name="Cormotif"; version="1.38.0"; sha256="0mkbj09rdxvcf4dmj5ri2099rs5k5391pdiw8kgj79framjjzmdg"; depends=[affy limma]; }; + CountClust = derive2 { name="CountClust"; version="1.20.0"; sha256="0prnv10zib8m21n5iv8gjkin09j9kj96aidjaylgpzc3a7f74286"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; + CoverageView = derive2 { name="CoverageView"; version="1.30.0"; sha256="1xhirbjdw09cqm4xvysxqicvqjbahavwvs7shg4cb05gwyd2ha8g"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.20.0"; sha256="1izsd5q8s9fi17vbs3lgp06d682lfcarca68n3x9wq9gs2bzlrss"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + CytoDx = derive2 { name="CytoDx"; version="1.12.0"; sha256="0yanb35bwywd5z8drd6vsw1dca8cp4znwnip7zvw8ssa41ix2zqg"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; + CytoGLMM = derive2 { name="CytoGLMM"; version="1.0.0"; sha256="1s5sbiagi0zgdldpwkm72mlmrv85dzvbc299p9q1yrxiyaq3gmbp"; depends=[BiocParallel caret cowplot doParallel dplyr factoextra flexmix ggplot2 ggrepel logging magrittr MASS Matrix mbest pheatmap RColorBrewer rlang speedglm stringr strucchange tibble tidyr]; }; + CytoML = derive2 { name="CytoML"; version="2.4.0"; sha256="0ixy7mmnipk8wy61wz6qy7jfbc5zhs6p5iqaii8hdprjnb841ri7"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice openCyto plyr RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib RUnit tibble XML xml2 yaml]; }; + CytoTree = derive2 { name="CytoTree"; version="1.2.0"; sha256="1vmqfs0nns9qfx726z67vbxg2lhi4zsnznk9d4hmm1k0acv96k62"; depends=[Biobase BiocNeighbors cluster flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; }; + DAMEfinder = derive2 { name="DAMEfinder"; version="1.4.0"; sha256="18h1xgj2yz89y154cnfqnr6rfnp11ccfvsvslpdxfjb7icix682n"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; }; + DAPAR = derive2 { name="DAPAR"; version="1.24.8"; sha256="12cfblknbp0119jmnzlh4q6bzvj4sinch49rrh7502gf7j20jidc"; depends=[AnnotationDbi apcluster Biobase Cairo cluster clusterProfiler cp4p DAPARdata dendextend diptest doParallel dplyr factoextra FactoMineR forcats foreach ggplot2 gplots graph highcharter igraph imp4p impute knitr lattice limma lme4 Matrix Mfuzz MSnbase multcomp norm openxlsx pcaMethods png preprocessCore purrr RColorBrewer readxl reshape2 scales siggenes stringr tibble tidyr tidyverse tmvtnorm vioplot visNetwork vsn]; }; + DART = derive2 { name="DART"; version="1.40.0"; sha256="18s0sbbsplh2kbn5j4d9h438kmjys31bcl4vnrazvcrvmbqf3bzd"; depends=[igraph]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.20.0"; sha256="0mr7glkx2d37l9nszs52m0kycpm14vxl5gdp3z7i5j7yig1sw2nk"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.12.0"; sha256="09fyr3i3dv6dg08cffkg6s5cdkz51s19p9ql52v98vw4xn8v9hka"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; + DEFormats = derive2 { name="DEFormats"; version="1.20.0"; sha256="1hkrqrqyk9hdlsl7zyy6vjv2q0v7h11yvc4l41zlc9zn7acqf27j"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.44.0"; sha256="1fyxm479g0dm52hshxrxrazsmz64irr2pbx08y7shb8xwk15ln8x"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.28.0"; sha256="1qxiz68ph4sknrvd3qfx2fqag74gfl9j22hkaaj3hdmskzk5rd4r"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.46.0"; sha256="05hjmdg8cjwymzsgr0ra29znyx20jmrsn10m4nkndipiacs701ha"; depends=[qvalue]; }; + DEP = derive2 { name="DEP"; version="1.14.0"; sha256="1larrj4wyb48wfnn1wd9kib6bklm41ggs4fw85z021rmsag37dkx"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; + DEScan2 = derive2 { name="DEScan2"; version="1.12.0"; sha256="0f40ffrxg54d0a3jqv2dp09i6d979ycl89ipphk6gm1gi6a1xab3"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.32.0"; sha256="0r1brwmj7av0bj72jajn27vx3zs1bgg8qfbhf02fln6kf7im4kaz"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEWSeq = derive2 { name="DEWSeq"; version="1.6.0"; sha256="0v48w4va545gi6mkyfwfqs92zc656m6298hh2pk32w49148hbc04"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.38.0"; sha256="1zywh30f4j4rj0f9w6yk5xr9mvdbg8gicy3wsb8yxdnamadyr7x4"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEqMS = derive2 { name="DEqMS"; version="1.10.0"; sha256="1p7xbg02z1nilvr0byh63gzslq20wfhd104mp71ghnab2kkngq31"; depends=[ggplot2 limma]; }; + DEsingle = derive2 { name="DEsingle"; version="1.12.0"; sha256="1ddk7rixfy93pycaarzg9397md942dqhv54cyig0i0n45b5gzv0f"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; + DEsubs = derive2 { name="DEsubs"; version="1.18.0"; sha256="1zk4zn1mmchrqddwxcma0w4z00m5c4xsh6qpz07xccrz7xdn58gj"; depends=[circlize DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; + DExMA = derive2 { name="DExMA"; version="1.0.2"; sha256="0gfpqhb2ynrhdm17mb30b5xihy674gd5cmy3l1n4g0dkmd018hdh"; depends=[Biobase DExMAdata GEOquery impute limma pheatmap plyr scales snpStats sva swamp]; }; + DFP = derive2 { name="DFP"; version="1.50.0"; sha256="17mnn1svygksb0fs074pfp1mchxz39sp6j57k5wrz75rnwbd3b6b"; depends=[Biobase]; }; + DIAlignR = derive2 { name="DIAlignR"; version="2.0.0"; sha256="0x0f0zjk7wshk34xf8cbh8si46n2ji7i06m3ihsp2bfmcdfs82ak"; depends=[ape bit64 data_table DBI dplyr ggplot2 magrittr mzR phangorn pracma Rcpp RcppEigen reticulate rlang RMSNumpress RSQLite signal tidyr zoo]; }; + DMCFB = derive2 { name="DMCFB"; version="1.6.0"; sha256="0zsqzkv8zvbn4qq6vmvkc4prx0w0w99sqz5pwr2vadsns53dif9i"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; }; + DMCHMM = derive2 { name="DMCHMM"; version="1.14.0"; sha256="1is7q7jyrvam677s9lgrbyfj4dhij07lc5agh7q80b0hjx2g3ql6"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; + DMRScan = derive2 { name="DMRScan"; version="1.14.0"; sha256="0b4ni5gn36sp8scm535ka51n67pvlzzf0dpzdbjcsrdz5rpma16s"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.24.0"; sha256="1hhb26vmnc4cn35474kkc56ahpdj23mhi9dcgv4r095ba7z6kw32"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="2.6.0"; sha256="0l50i2qp1yngzc6j7qskr7nk3x9ja7rynkm8bp522c3994kmhig8"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; }; + DMRforPairs = derive2 { name="DMRforPairs"; version="1.28.0"; sha256="1khfcs8z60g6m64awacpaplci3c3pv9n3z0ajj5h7cf3nn841qxp"; depends=[GenomicRanges Gviz R2HTML]; }; + DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.8.0"; sha256="1dls7m5szdyd2hd7w6mwbj5bsn9ij1zzm0gr38bylkj1jp82xjdw"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; }; + DNABarcodes = derive2 { name="DNABarcodes"; version="1.22.0"; sha256="1wiqmzjcb7flp7ldcgbx91asxxrmm1rg9pcfljniab9xcsldhksp"; depends=[BH Matrix Rcpp]; }; + DNAcopy = derive2 { name="DNAcopy"; version="1.66.0"; sha256="0mgq814f6c2271d2lxg763bsnv3ma4ari5xa4x1rbksv8yvcjc4d"; depends=[]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.20.0"; sha256="09271m79llrs48h8723qsvl4aigjwaif6is0mkdk2dpqi80aza3k"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOSE = derive2 { name="DOSE"; version="3.18.2"; sha256="0kp6j42mpxrpd02cjrzqmrx3rvvpi90xiy4gc5km6ny3vxbhlaqw"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.20.0"; sha256="1rswd4lks4v6nfkkiqn2spicjpwsbi2sg8wz44bhf2idxc5mlad4"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; + DSS = derive2 { name="DSS"; version="2.40.0"; sha256="094z7n8m4mygvxpl7vlh8ls4aggrxcmsc0wh8khnz61sfsv2q15l"; depends=[Biobase BiocParallel bsseq DelayedArray]; }; + DTA = derive2 { name="DTA"; version="2.38.0"; sha256="10fnqvip3sxxpxq6y9565gkrzk2gr4269l5xcdph4awrjlq6pshz"; depends=[LSD scatterplot3d]; }; + DaMiRseq = derive2 { name="DaMiRseq"; version="2.4.3"; sha256="0mr1nzhyiz9h57v51m1k58wz2iyw0ir5xilsgg3y5qdx6b5alyl9"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; + DeMAND = derive2 { name="DeMAND"; version="1.22.0"; sha256="1amm5fr7jsrlq0qzvf10ibfnkq2xwrn2rf5j7b7ssp3srs98bir3"; depends=[KernSmooth]; }; + DeMixT = derive2 { name="DeMixT"; version="1.8.0"; sha256="0z2fb2j4a04fa23d32dvp3cxid8phmwbrd8d66c8llivxppcdd35"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp SummarizedExperiment truncdist]; }; + DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.34.0"; sha256="011v141dvi62f8ff6svq481x0sngxdkfryl1jr1xrbi69wjyr074"; depends=[ggplot2 limSolve pcaMethods]; }; + DeepBlueR = derive2 { name="DeepBlueR"; version="1.18.0"; sha256="0hrqdvqaz7z38pl71pzk9py6bx79rks8cc5mg2biwcansmyk1rvp"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; + DeepPINCS = derive2 { name="DeepPINCS"; version="1.0.2"; sha256="1p27ff1d8wxirm781mp59n6hn39m30dvq2r0qwp7i5ny3ww5gav7"; depends=[CatEncoders keras matlab PRROC purrr rcdk reticulate stringdist tensorflow tokenizers ttgsea webchem]; }; + DegNorm = derive2 { name="DegNorm"; version="1.2.0"; sha256="12ilvdcfjh9r2q8i28kwbbh26mm583fh2n3kznvp1v6xx53zxcg1"; depends=[data_table doParallel foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges plotly plyr Rcpp RcppArmadillo Rsamtools S4Vectors viridis]; }; + DelayedArray = derive2 { name="DelayedArray"; version="0.18.0"; sha256="0w632262dqzcnvq9s6jvc7naz93dayx51fsv05s0zb6cjwygbqjr"; depends=[BiocGenerics IRanges Matrix MatrixGenerics S4Vectors]; }; + DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.8.0"; sha256="06w8asdcaksp7q20jb5x7fp3a0gz2nk2a0zdjvq39a1m53xa804d"; depends=[BiocGenerics DelayedArray S4Vectors]; }; + DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.14.3"; sha256="1zxs2wjnsq9w1cl4andsd7y9xsdnl1an55khw9viaq758m7hhbcn"; depends=[DelayedArray IRanges Matrix MatrixGenerics matrixStats S4Vectors sparseMatrixStats]; }; + DelayedRandomArray = derive2 { name="DelayedRandomArray"; version="1.0.0"; sha256="17mpd658k0pmrd757i6x2a9rg7w4x8cwn704h8ayfmbki8zc11di"; depends=[BH DelayedArray dqrng Rcpp]; }; + DepecheR = derive2 { name="DepecheR"; version="1.8.0"; sha256="04vxc43p3kpsx0vksk2nwmy9p56h35z2mc8j9p2wm29zaz1y8j3p"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gmodels gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; }; + DiffBind = derive2 { name="DiffBind"; version="3.2.7"; sha256="01jfxcj5c0088vvsi3pz8fs0ka6n12l2j8s1d0rpqwa1y0444x7z"; depends=[amap apeglm ashr BiocParallel DESeq2 dplyr GenomicAlignments GenomicRanges ggplot2 ggrepel gplots GreyListChIP IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; }; + DiffLogo = derive2 { name="DiffLogo"; version="2.16.0"; sha256="1xblwwlddr5093qimzgz30sxpaaiqf32q2daj76i6zhfp4x4wvzi"; depends=[cba]; }; + Director = derive2 { name="Director"; version="1.18.0"; sha256="0yd3k687zlvx3d8ng0i3z1339cmzjb9vwi3sc5jq07xl0yqinvmn"; depends=[htmltools]; }; + DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.34.0"; sha256="0ikmj0300lfzj6q1vyahfyx5kwi5h59mds7ym4f2j1bbxqzy6ssl"; depends=[BiocGenerics IRanges S4Vectors]; }; + DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.8.0"; sha256="0wa7y1ffamip7zyg4fvk6fr6lkbif148iv7mwk1m0g7gkzvnfgwa"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; }; + DominoEffect = derive2 { name="DominoEffect"; version="1.12.0"; sha256="1rlhg0bbiy5bc6ivipkrdfvl2idb3mjx7hinrqv31vf6qlfh56m9"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; + Doscheda = derive2 { name="Doscheda"; version="1.14.0"; sha256="11qw60vl4h4pav9w59hfcwjc5gc6rvwj9b4rrdw3dkd5kpkamshh"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; + DriverNet = derive2 { name="DriverNet"; version="1.32.0"; sha256="0qivc30n3cq2f1kfb21azd7kwx1gmy63sy4xyk6mwwgc3zgd5xic"; depends=[]; }; + DropletUtils = derive2 { name="DropletUtils"; version="1.12.3"; sha256="11s0dk4m4qinbfnhsilxna536ys1ndkzd2cjig8sbky4dvx7r584"; depends=[beachmat BH BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dqrng edgeR HDF5Array Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; }; + DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.34.0"; sha256="0qbaqxn8m7l0nzmmr0icn8fqgc3v21rraqnxrjz7nbh9fzc3klhd"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; + Dune = derive2 { name="Dune"; version="1.4.0"; sha256="11ya7jf6gc5z0xb7cn793dl4bhw83xwsr6k294w41xrkvqxw4iif"; depends=[aricode BiocParallel dplyr gganimate ggplot2 magrittr purrr RColorBrewer SummarizedExperiment tidyr]; }; + DynDoc = derive2 { name="DynDoc"; version="1.70.0"; sha256="08nk3rf43djas3vpr1rnn9b529frqhd6bxd2wzjh8z01fqi8fx4h"; depends=[]; }; + EBImage = derive2 { name="EBImage"; version="4.34.0"; sha256="1z3cxxg593d66nczz5hh2hdj1d87wc0lxrzc5sn6bp43n351q8h3"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; + EBSEA = derive2 { name="EBSEA"; version="1.20.0"; sha256="1sxqcwz6vm2rcw2k8hc0np1zxmffy1shkfllh4jbrdh0516j2jbm"; depends=[DESeq2 EmpiricalBrownsMethod]; }; + EBSeq = derive2 { name="EBSeq"; version="1.32.0"; sha256="0h5v3vrb90zim80bdnr3aw58g3h7zjqa4l9i0jwx5j19ywf54fdz"; depends=[blockmodeling gplots testthat]; }; + EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.26.0"; sha256="0fzi7060yap5628d7v0qay18k7k6wkjfbv3sfl1xisfkz0rdjvii"; depends=[EBSeq]; }; + EBarrays = derive2 { name="EBarrays"; version="2.56.0"; sha256="1k1kl0m7wzaqpv7i20pfav2a6jf93bhri4w7qdikmvkf011n9422"; depends=[Biobase cluster lattice]; }; + EBcoexpress = derive2 { name="EBcoexpress"; version="1.36.0"; sha256="1df87rl026rzcrhiacqcpwg3wp9r13lxhb7vscw6jmcwyfnhhdmi"; depends=[EBarrays mclust minqa]; }; + EDASeq = derive2 { name="EDASeq"; version="2.26.1"; sha256="0pakcbkalhhqz3d9lpfx3hscf53k24mlmrywxxzfg43yq57srkql"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EGAD = derive2 { name="EGAD"; version="1.20.0"; sha256="05gfzi1lrryx7ssxd7415c2bsmnm33ca32v7hw1dd5jgv30nbcpi"; depends=[Biobase GEOquery gplots igraph impute limma MASS plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.20.0"; sha256="0wxql39p42craa9z209l9pxr3kqb99kq7y9cwwvkdhp5q2bsfsrj"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; + ELMER = derive2 { name="ELMER"; version="2.16.0"; sha256="07yl4xcymk4km5zglj9hcgdb0hjjrnr374yp6r59j8cz76smym92"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; }; + EMDomics = derive2 { name="EMDomics"; version="2.22.0"; sha256="0m11n9wj6rh5x0fzih8s661h0dziss907bwbc9hnmsjkabvvl39s"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; + ENmix = derive2 { name="ENmix"; version="1.28.5"; sha256="1gf2xxz9991644x8c4nv3fs6g321zqk9c0j6v1bx47j5jyfi5iy1"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots gtools illuminaio impute IRanges irr matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; }; + ERSSA = derive2 { name="ERSSA"; version="1.10.0"; sha256="0ph4bscydwn1a9w91b3ab1lj31kn7ddi9wfm6bhdv949pb4p48xn"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; + EWCE = derive2 { name="EWCE"; version="1.0.1"; sha256="0dyzvkqi0dzrjhs50p1d9kcyyin4vvjjrdjjh7mxwpr4kirxghdh"; depends=[AnnotationHub biomaRt cowplot ewceData ExperimentHub future ggdendro ggplot2 gridExtra HGNChelper limma Matrix reshape2 RNOmni scales stringr SummarizedExperiment]; }; + EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.20.0"; sha256="1zaz8h2mzh0fnfq9h3yvhnj2mpafd36vwlfa5c92piddrrk9g9q8"; depends=[]; }; + EnMCB = derive2 { name="EnMCB"; version="1.4.1"; sha256="0xhcz7r7vg1n08phdd43i6likn791lrkjzy0wi1hcswmw6p5i7h0"; depends=[boot doParallel foreach ggplot2 glmnet IlluminaHumanMethylation450kanno_ilmn12_hg19 mboost minfi rms survival survivalROC survivalsvm]; }; + EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.10.0"; sha256="11p41y2s5iydi7q3fk992jgmx8r0xnh0pv1idjgcpyn36hh2k5x7"; depends=[ggalt ggplot2 ggrastr ggrepel]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.22.0"; sha256="1dd17jlcwvrhzkz8wjcwb3vwkjj137d9gaw036zn9rjhbpznzigm"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.22.2"; sha256="172cgbakc69a7pv4839hywmki606p61qgp9rpxzc9agqcw3xk2aw"; depends=[AnnotationDbi BiocFileCache BiocManager edgeR GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview Rgraphviz S4Vectors safe SPIA SummarizedExperiment]; }; + EpiDISH = derive2 { name="EpiDISH"; version="2.8.0"; sha256="1dlw4pm88w3mdp5ws34qcxy11563znjcj3dk46z1iw1n4mswx3d9"; depends=[e1071 locfdr MASS Matrix matrixStats quadprog stringr]; }; + EpiTxDb = derive2 { name="EpiTxDb"; version="1.4.0"; sha256="0nhlfc5spf55kx5in3b9hndzf8vwp455sxdbyqwvs3zqb4x8isll"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings RSQLite S4Vectors tRNAdbImport xml2]; }; + EventPointer = derive2 { name="EventPointer"; version="3.0.0"; sha256="16hs4mlkb76kwnwrxpjlc2bgizzmbv9q0bc194qyr2j9idb3mpxp"; depends=[abind affxparser Biostrings BSgenome cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges glmnet graph igraph IRanges iterators limma lpSolve MASS Matrix matrixStats nnls poibin prodlim qvalue RBGL rhdf5 S4Vectors SGSeq speedglm stringr SummarizedExperiment tximport]; }; + ExCluster = derive2 { name="ExCluster"; version="1.10.0"; sha256="1dgjmqwpma42iy5f25pz9glr2nkm7y285hixnx2mw1xyn28yfjf9"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; + ExiMiR = derive2 { name="ExiMiR"; version="2.34.0"; sha256="0p95iawzmds5c3j6pxfl7q90nyzy136s1v522sxvwsqg7pwjkrgn"; depends=[affy affyio Biobase limma preprocessCore]; }; + ExperimentHub = derive2 { name="ExperimentHub"; version="2.0.0"; sha256="1mzmw3100lf33yhz27nbxncrjk5bprlackrjcwf8xdhcaidg40p4"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; }; + ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.18.0"; sha256="019ni1d2qhadf2xnyz6g79qll6ir7zcizjw0cb56czg9c0cj2nsc"; depends=[AnnotationHubData BiocGenerics BiocManager curl DBI ExperimentHub httr S4Vectors]; }; + ExperimentSubset = derive2 { name="ExperimentSubset"; version="1.2.0"; sha256="0xmh36xhk9arwf9c9w8jvg7ixxxcfv2bc0japyvydsvfyz53k5ss"; depends=[Matrix S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment TreeSummarizedExperiment]; }; + ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.4.0"; sha256="0frbm8w0ghzs4228k6y2c4h5m93zprl7wbp21pp62fyy5r3w584y"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard shinyjs tibble tidyr]; }; + ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.20.0"; sha256="1aiciicrf159bkiml8xb3w06f0g2ki94j75gl20680p1bm53ymb3"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; + FCBF = derive2 { name="FCBF"; version="2.0.0"; sha256="0zzh21axis90g2vgvm71vb7p2yzks9ijapafyz19j124izwyinsi"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; }; + FEAST = derive2 { name="FEAST"; version="1.0.0"; sha256="1md0kd65v0nb9qa3s886jycbhqg0m4wx7n9nkz2270ww5lhgpvca"; depends=[BiocParallel irlba matrixStats mclust SC3 SingleCellExperiment SummarizedExperiment TSCAN]; }; + FELLA = derive2 { name="FELLA"; version="1.12.0"; sha256="0iii0fnralm5a4qarnimc2phynpbwyp7d1zr8jg8j7pr1ylwg3gd"; depends=[igraph KEGGREST Matrix plyr]; }; + FGNet = derive2 { name="FGNet"; version="3.26.0"; sha256="1v2rbiypv3ljv41x55gvyx9rrld13lcn8i6fhjp4vd1vvychg2g3"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; + FISHalyseR = derive2 { name="FISHalyseR"; version="1.26.0"; sha256="19q7hbzl1bg1kb1jy1pihjgz36mi8ccfinhxs1cd8hksm5wg6jr4"; depends=[abind EBImage]; }; + FRASER = derive2 { name="FRASER"; version="1.4.0"; sha256="03fbargi2q8y1d030laplk8wa3rmld52w2da96d65rg07iidh1aj"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr generics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats OUTRIDER pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.28.0"; sha256="0dfdbgmp5avw5hw4fwilim47qg8jb4d3r2rx6qmvzi42bcqighmd"; depends=[fda MASS]; }; + FScanR = derive2 { name="FScanR"; version="1.2.0"; sha256="0gxfck1fvnmfzslz4vpfsqcnygjm2s817x1sisaxgyd55v6c5jcq"; depends=[]; }; + FamAgg = derive2 { name="FamAgg"; version="1.20.0"; sha256="0z2nsjvzi80w5dbxjyp51j7cl3ff7ipak02m9p3xqrrnfjba34wp"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; + FastqCleaner = derive2 { name="FastqCleaner"; version="1.10.0"; sha256="06dcnq56fc48sl968fxywsz2d4lipbwkl21wzca2sz52pdfhsh4p"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; + FilterFFPE = derive2 { name="FilterFFPE"; version="1.2.0"; sha256="1rzl3sw2gsgjdn9is566g5pjlj8imk992angb7m243y5vgqsx9gd"; depends=[doParallel foreach GenomicRanges IRanges Rsamtools S4Vectors]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.22.0"; sha256="124sgww90ab77d3l1spsjlm6483l22qq98v9n8rar30z3a6g1iph"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FitHiC = derive2 { name="FitHiC"; version="1.18.0"; sha256="1p8a6lis5yswaj647bjw89harlarnsxmvjzz63fn1l6gxrwhh8bx"; depends=[data_table fdrtool Rcpp]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.23.0"; sha256="04lk2cahf6zqnhpzh0zwas4vmvaz4kcik9ri65bs9d9ximzjam91"; depends=[jsonlite RCurl XML]; }; + FlowSOM = derive2 { name="FlowSOM"; version="2.0.0"; sha256="18h7p7g3w9imyd1c93jllgp4kd74z96cs85wcqfhmd26nx18hl82"; depends=[BiocGenerics colorRamps ConsensusClusterPlus CytoML dplyr flowCore flowWorkspace ggforce ggnewscale ggplot2 ggpointdensity ggpubr ggrepel igraph magrittr pheatmap RColorBrewer rlang Rtsne scattermore tidyr XML]; }; + FoldGO = derive2 { name="FoldGO"; version="1.10.0"; sha256="0j64767cwipwcsgkr5yjhgfdi0fjahvmbrnfl2drn0cxgzrjpb0k"; depends=[ggplot2 tidyr topGO]; }; + FunChIP = derive2 { name="FunChIP"; version="1.18.0"; sha256="0rfqh1217jwmb7shyhil58by4qsfz3wlaa386zbxs0bf82xbkjcg"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; + GA4GHclient = derive2 { name="GA4GHclient"; version="1.16.0"; sha256="00h6j3bl1m9zd9zqc6cr825y3c0xqcbp1cj9n8sszgbaxjrv353l"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; + GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.14.0"; sha256="1b0zf8gvnfkgkjnw0wj0ya4dw89kw5r3ajqp569ak7431qr71ir4"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; + GAPGOM = derive2 { name="GAPGOM"; version="1.8.0"; sha256="108x2rmbxp9qxmf3w4rji1n7f4lqda10mk09i9mqffdqy3b3p67h"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; }; + GARS = derive2 { name="GARS"; version="1.12.0"; sha256="0r6yvnld94669mw0vbnlzpf6ljxbjixxg51ksvisb8p70gl517a6"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; + GAprediction = derive2 { name="GAprediction"; version="1.18.0"; sha256="0hnirag3dvf8h9hcirmmpfzwy8xxmn9xk8413z1xcjw3gd8k3bi3"; depends=[glmnet Matrix]; }; + GCSConnection = derive2 { name="GCSConnection"; version="1.4.0"; sha256="19yvq8cngycx08i7s90iqjyc0aww24x0sad491w5gma9xbi9fkig"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; }; + GCSFilesystem = derive2 { name="GCSFilesystem"; version="1.2.0"; sha256="0nbarxyvk872rbljl212w453yh7f8wjy00kp6idlzqk2x608xhln"; depends=[]; }; + GCSscore = derive2 { name="GCSscore"; version="1.6.0"; sha256="13wr36hjhrc4i28mbq51j13zbb6ax7r5hgqfjin79h2r805qfvb0"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; }; + GDCRNATools = derive2 { name="GDCRNATools"; version="1.13.1"; sha256="1wvbdmddnq0w9z7ix4yna4sjzv547hiw2pihgf5k62gqnhdr60v9"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; + GDSArray = derive2 { name="GDSArray"; version="1.12.0"; sha256="1jvdlph4jd3gjxp6vr5klvcfahnvfb9kl1jd60m8rnx9395p5h5j"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; + GEM = derive2 { name="GEM"; version="1.18.0"; sha256="1yw7h8frjz6dfv9xp9vxa153gfl3kqvcznjabxr9qjgaknfj50zk"; depends=[ggplot2]; }; + GENESIS = derive2 { name="GENESIS"; version="2.22.2"; sha256="1gbac3pbf9lh2c4316z4mzgv5rkmar7axh799gkr79g55rlcpysg"; depends=[Biobase BiocGenerics data_table foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; + GENIE3 = derive2 { name="GENIE3"; version="1.14.0"; sha256="1v54dzcz654wfm3npbp8gb55v49im0fm547cz3hvsidq4zhi3l1b"; depends=[dplyr reshape2]; }; + GEOfastq = derive2 { name="GEOfastq"; version="1.0.0"; sha256="0kvvx728y8cl6vsc8jljgbz2ssmp9qialb3bwvkmq6m5jp3jzik9"; depends=[doParallel foreach plyr RCurl rvest stringr xml2]; }; + GEOmetadb = derive2 { name="GEOmetadb"; version="1.54.0"; sha256="0jayfnlv5x8s9nkbs6mkwcmgfff11jk8sis16zz7pqfq6xpwdicg"; depends=[GEOquery RSQLite]; }; + GEOquery = derive2 { name="GEOquery"; version="2.60.0"; sha256="0jhkdbcd03d5n8vn3xkad6f21xjkawyxc9rdwcj8vwc8alx730am"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; + GEOsubmission = derive2 { name="GEOsubmission"; version="1.44.0"; sha256="1d3rv8gwgd4zp7k3x5k6fbsjc1q09h4lni81nmid9p180qyi56xg"; depends=[affy Biobase]; }; + GEWIST = derive2 { name="GEWIST"; version="1.36.0"; sha256="1hplhdz19vz0y5qq5ba435r4sd99m1krpfyrawalavary2pnl1c3"; depends=[car]; }; + GGPA = derive2 { name="GGPA"; version="1.4.0"; sha256="1m2k2d2csx0p8i3ag02m7mh7yfvlxzqqnxcp4739rbhxyd31li58"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; }; + GIGSEA = derive2 { name="GIGSEA"; version="1.10.0"; sha256="099gmqn5j6sbcj6zzfnl096lri2vy0fkbs69xbx1rf0392mkh91q"; depends=[locfdr MASS Matrix]; }; + GISPA = derive2 { name="GISPA"; version="1.16.0"; sha256="11sajj0kmc1pj0r6nsy79s79zmlws1cdjfq0p8d62lwaqi278l13"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; + GLAD = derive2 { name="GLAD"; version="2.56.0"; sha256="0hfpfr9f6siq36wz5mzl6qnqq8cfy628vbl9k7kl18m9zq8v9vhx"; depends=[aws]; }; + GMRP = derive2 { name="GMRP"; version="1.20.0"; sha256="0cqpsczmwc2ggz70j8d1n8kn0m8n1in06pj0lgs4dbnm3hb8xhkr"; depends=[diagram GenomicRanges plotrix]; }; + GNET2 = derive2 { name="GNET2"; version="1.8.0"; sha256="1icv3665iki4ad2j1ab9n3pnw2r6c0v66xj4b8cdb8xliw8g93km"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; }; + GOSemSim = derive2 { name="GOSemSim"; version="2.18.1"; sha256="00dbgkiv9x7g2i0anzcxpycwqqqry0y7jl3ad93lhvi31qnqq1sm"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOSim = derive2 { name="GOSim"; version="1.30.0"; sha256="1qdkwnclga8xzbcc5qz2vma7zicfd9wgadjjprxfj7ak5s4dczsz"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.28.0"; sha256="1jl90842wsp0064rkhmgr40qhsq0kpj9nvdwc7jpddbg0z2zfrkj"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOexpress = derive2 { name="GOexpress"; version="1.26.0"; sha256="062d69g9yn3si6fg2y0j92zrxz0rz15lwvjwfyqgnxbygqm9vdry"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; + GOfuncR = derive2 { name="GOfuncR"; version="1.12.0"; sha256="0lp2gmjlsk1yqxim5pi26i27iijw11lrcxmji7ynlag359yfnynd"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; + GOpro = derive2 { name="GOpro"; version="1.18.0"; sha256="1bj22bf2lkr5wvn3b3m6mncy12l4csfh918drf6sh4wn3flzxpqj"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; + GOstats = derive2 { name="GOstats"; version="2.58.0"; sha256="0jjswy6qmfgr2f6vk3y9pdvs9x91gn31h55qllgh0qb2cb26g9wa"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.28.0"; sha256="02y28jn7iv74njwk6vwfdax4h9ccy8ia630yh16rmid62icbglvd"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; + GPA = derive2 { name="GPA"; version="1.4.0"; sha256="0ry9l3k78dmmkivxfdvbv29k8w96j72w1wy4rxq6f0lw14qmqmfx"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; }; + GRENITS = derive2 { name="GRENITS"; version="1.44.0"; sha256="0d60nbnbhp4qx4rnxnlb2iinaysmfw271f5zn6zn9lw5wf2s40di"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; + GRmetrics = derive2 { name="GRmetrics"; version="1.18.0"; sha256="0nlfafhgjxm7nii0p84hsa8d3lc1jpammgyjsbs3rmbd4y7f0l64"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; + GRridge = derive2 { name="GRridge"; version="1.16.0"; sha256="06ki206fjdppvd7426zpdck4gv9xjwfy8f74m81pfffg52kjr5gs"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; + GSALightning = derive2 { name="GSALightning"; version="1.20.0"; sha256="0habixm6g226pf0y1y4f3djcrv8007xr291wjwvjxyv4blhdc1cm"; depends=[data_table Matrix]; }; + GSAR = derive2 { name="GSAR"; version="1.26.0"; sha256="14mvcv3mid3bjfjfh13ib60vvhkgifbhb8cylr9g1v131ljlys0y"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.22.0"; sha256="15f6y4yh99qkc88pr8p8id3gmgcqagaag09w1n9hywn9x0a9h5gh"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.54.0"; sha256="0946kkykms79mqnx262q20xzrrhv7cv723xh378335ff41qyf63n"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.12.1"; sha256="06iqz9h36agyp8sngvxya8xjv6bd6g8dgcn5zlj4gcaf66sb68s1"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO S4Vectors SummarizedExperiment]; }; + GSEAlm = derive2 { name="GSEAlm"; version="1.52.0"; sha256="1jhdrk2p2mpfih5j3gzp1lncykdp6bjx1v3sspff7ahhlri29mxp"; depends=[Biobase]; }; + GSEAmining = derive2 { name="GSEAmining"; version="1.2.0"; sha256="14igvyym6j9biyk43af32b3x933hr4bzg4bc5w4hrkdypyzhbqqs"; depends=[dendextend dplyr ggplot2 ggwordcloud gridExtra rlang stringr tibble tidytext]; }; + GSRI = derive2 { name="GSRI"; version="2.40.0"; sha256="0acqf4x73l3i0vdgjkjra42h1sss1mjwg697iy4ndqgk04fcan81"; depends=[Biobase fdrtool genefilter GSEABase les]; }; + GSReg = derive2 { name="GSReg"; version="1.26.0"; sha256="1jlc2hp27rsy8d2z4pdcif0xd71gbljd2xzscmkzrw2s5bbnip9l"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; + GSVA = derive2 { name="GSVA"; version="1.40.1"; sha256="0qf01vcj6nh1xhg1g29z73dnhhybl10bpfr3jiqk55na2q2i599h"; depends=[Biobase BiocParallel BiocSingular DelayedArray DelayedMatrixStats GSEABase HDF5Array IRanges Matrix S4Vectors SingleCellExperiment sparseMatrixStats SummarizedExperiment]; }; + GSgalgoR = derive2 { name="GSgalgoR"; version="1.2.1"; sha256="1z1lwx53clx1pqpvdzlbk837pyvsc0p3r0iha404nlrmj27r4vmc"; depends=[cluster doParallel foreach matchingR nsga2R proxy survival]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.22.0"; sha256="1qjfsghrvhy4s59lhwwjkqiy9q1gb1bkrnd0bh2pz5ndfcmqkp49"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; + GWAS_BAYES = derive2 { name="GWAS.BAYES"; version="1.1.0"; sha256="1xsphhldr0b9hsqvxpsm2wja95im458rjzwljajx1ciwp94qagnm"; depends=[caret doParallel GA ggplot2 Matrix memoise Rcpp RcppEigen reshape2]; }; + GWASTools = derive2 { name="GWASTools"; version="1.38.0"; sha256="0as6rhl2g661kyf8qryjc1dvxi8vx9d70qfxpw63573vj05hfngp"; depends=[Biobase data_table DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; + GWENA = derive2 { name="GWENA"; version="1.2.0"; sha256="1jslfkcpx7gbw2vnf9dp7mmj2jlq477ni77x944jm3z2dnzvps7r"; depends=[cluster dplyr dynamicTreeCut ggplot2 gprofiler2 igraph magrittr matrixStats NetRep purrr RColorBrewer rlist stringr SummarizedExperiment tibble tidyr WGCNA]; }; + GateFinder = derive2 { name="GateFinder"; version="1.12.0"; sha256="1xh9g4v7hrp6d6n1zp7qplr04hc7i7ym4jjd4kx4aag4vpil9ikf"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; + GenVisR = derive2 { name="GenVisR"; version="1.24.0"; sha256="0pp64hd6fdpgglpv007m2jca57rfphn6qgfqa07g7055isa2yy8g"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; + GeneAccord = derive2 { name="GeneAccord"; version="1.10.0"; sha256="1q0wpnp0bc9igvncm7vyg79l9ij1sf14k6kixnwankg963z2b52q"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.22.0"; sha256="0kvpn87rlcwgqp6hdjiy4226rprlxzixax0jv3km7a4sfvf53l4y"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.38.0"; sha256="1h5n64qv2psqg0fv00j8nr94hfm9sjjdlg78zbx5l41hx5jmqnj4"; depends=[Biobase]; }; + GeneGA = derive2 { name="GeneGA"; version="1.42.0"; sha256="1j1lb69jy67abk1v2mizsrxq2sbvmm137filb91s19a00nafn8cc"; depends=[hash seqinr]; }; + GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.18.0"; sha256="1jfkbk1nlca6n3d2k5m0fwls4si1ic9rxj06ar019z9vyvhwj5z0"; depends=[data_table FactoMineR GenomicRanges igraph IRanges kernlab mvtnorm Rsamtools snpStats]; }; + GeneMeta = derive2 { name="GeneMeta"; version="1.64.0"; sha256="069w20ajyiq0q6qmb4rrs7vmzwlaq3wdd04nn31s700jdfcw6g66"; depends=[Biobase genefilter]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.34.0"; sha256="0q0742yk95xlp0bm18ng0h2q62wa7bxp7hc2nmqiyi2azny4npyy"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; + GeneOverlap = derive2 { name="GeneOverlap"; version="1.28.0"; sha256="1kfw3h68rvbafhklds6sfmviwv91nms8wk0ywzkjg5h3mmgxbsv9"; depends=[gplots RColorBrewer]; }; + GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.48.0"; sha256="0hf9nvjqx3107h92yfh9ran7k93ljq1qzkhq8zphdsngky17nnfb"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; + GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.36.0"; sha256="1zkz7384sl1yldpm23j8r6k7jpv6iaqk8saii7alhfx08qzj9j5g"; depends=[Biobase limma MASS]; }; + GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.12.0"; sha256="019ydjs1s1icgggrar0hqykkivvdm63ysjvf4g8mr8pdl69gfidy"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; + GeneTonic = derive2 { name="GeneTonic"; version="1.4.1"; sha256="0604i8wl3xcaj53mj70m46qnpc32kkb1sgxx5c6vq9np12mmycmj"; depends=[AnnotationDbi backbone bs4Dash circlize colorspace colourpicker ComplexHeatmap dendextend DESeq2 dplyr DT dynamicTreeCut expm ggforce ggplot2 ggrepel GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinycssloaders shinyWidgets SummarizedExperiment tidyr viridis visNetwork]; }; + GeneticsPed = derive2 { name="GeneticsPed"; version="1.54.0"; sha256="0225idv7dqk2jhcd23bad2s474szib83wfa6czw4g60i0jrm0vwp"; depends=[gdata genetics MASS]; }; + GenoGAM = derive2 { name="GenoGAM"; version="2.10.0"; sha256="0pf3mmf62na7g065rbwaq5lkcadzkdr862wl80gi5g17fpwc0vxx"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.28.4"; sha256="0fjpgvpvyvl8cqgh2annib6h0c5li3aqz1ajfh5z5k5d0avdm4w0"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.28.0"; sha256="00rq110jkh89nxgk05zh8kssxk8mb4dq0wjg3n7ivfmmm9wdwhp2"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.16.0"; sha256="1m7lvvki2azp8c7faybkx0rnpwwmvqkmbjbsqpmriz3484cxgs97"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang S4Vectors SummarizedExperiment tibble xml2]; }; + GenomicDistributions = derive2 { name="GenomicDistributions"; version="1.0.0"; sha256="0fz124inqjlqm8wrjm82183mdw8bxvlg3mcpn646bz1q0m7bs9zx"; depends=[Biostrings data_table GenomicRanges ggplot2 IRanges reshape2]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.44.2"; sha256="091p8xnf2xkqhind81vyv1rmy2fz2b3qalcbrsw4qnp24vgdv2am"; depends=[AnnotationDbi Biobase BiocGenerics BiocIO biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.28.0"; sha256="1plh14m7w6calw5yxcxp7g4bg8q00ax85m517wap78bni975k13y"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges MatrixGenerics Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.26.0"; sha256="0zjl7rp5fk14kqsx0bkbpq6hqahbkiyvwa9aggp4kfb8hnmz9qal"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicOZone = derive2 { name="GenomicOZone"; version="1.6.0"; sha256="09cmgxszlabjs94wil46b4gp5bbfiba4b3a2j7x83hyl0d4rz4dc"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges lsr plyr Rdpack S4Vectors]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.44.0"; sha256="1qxc6dcwdlkan3hg0j9yfhz7gyi9qg671yj6zizsk6mzl7qqva0x"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicScores = derive2 { name="GenomicScores"; version="2.4.0"; sha256="1b8982fj0r7igj749wljsdfn3c985w8n3d5gbhr5rw73llfb8x6w"; depends=[AnnotationHub Biobase BiocFileCache BiocGenerics BiocManager Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors XML]; }; + GenomicSuperSignature = derive2 { name="GenomicSuperSignature"; version="1.0.1"; sha256="1lwr8jjxkm5hix1ky31024vjx4b8j46kq2cn3khsb8ccraac8ngp"; depends=[Biobase BiocFileCache ComplexHeatmap dplyr flextable ggplot2 ggpubr plotly S4Vectors SummarizedExperiment]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.26.0"; sha256="1ngvskrcxhcpj2fnjxnjr2v37fr9ldj7jaflwql76y0fwnr8ak9g"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + GeomxTools = derive2 { name="GeomxTools"; version="1.0.0"; sha256="1y0n9yswfw219q2vc11mn6zj1gs2x0inr9biwda8w4dqjmakyxs2"; depends=[Biobase BiocGenerics EnvStats NanoStringNCTools readxl reshape2 rjson S4Vectors]; }; + GladiaTOX = derive2 { name="GladiaTOX"; version="1.8.0"; sha256="0aya7xj45axnlzxxhjn0p209q8nzly87pvhawb2lw7iqh8faszyv"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; }; + Glimma = derive2 { name="Glimma"; version="2.2.0"; sha256="0dsk8qmwimzmd1x4k4jwg9q11jm1ahn8cw0gzd6s2gmigfls4hsa"; depends=[DESeq2 edgeR htmlwidgets jsonlite limma S4Vectors SummarizedExperiment]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="4.10.0"; sha256="1g6yafxlky8x6piba767j3pk8zqgf1z5svzdiskng3a56rzil3rj"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; + GmicR = derive2 { name="GmicR"; version="1.6.0"; sha256="02nwk4drjwnbfzznzxxqbb0ss91skx3dbppl3r7br67yr6k5jf5y"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; }; + GraphAT = derive2 { name="GraphAT"; version="1.64.0"; sha256="08yc9fr9wkhzcn99fqjijy98xrk2d19z7v221331fz7vik06086k"; depends=[graph MCMCpack]; }; + GraphAlignment = derive2 { name="GraphAlignment"; version="1.56.0"; sha256="0ba3vk5izkxqwigidwhfnsk1xpg5pcsa9pla51yjzknicn2sbf5c"; depends=[]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.34.0"; sha256="0y2cp552l648dz0gniw5zjdw4i2nr526d9s0rdahrdkls51v6g1m"; depends=[igraph iPAC RMallow TSP]; }; + GreyListChIP = derive2 { name="GreyListChIP"; version="1.24.0"; sha256="1g9ja8p90czx83ar0l9ran7m6aggvszdbqm714fq7z4rxq9b4hs3"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; + Guitar = derive2 { name="Guitar"; version="2.8.0"; sha256="1q4m6c5181dw12lvdp324jlk78c9jgcsg6b9hk87zjadp6j0gfr6"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; }; + Gviz = derive2 { name="Gviz"; version="1.36.2"; sha256="0lp0k8jd4dfsfn10706124graaqnzcyv1siblvm8dn2ykw2rc6vl"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.20.0"; sha256="1718hplz5qlbwxwb87509bl7lir9kilvn1s7p2haz551pg48zvrc"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 rhdf5filters Rhdf5lib S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.26.0"; sha256="1kyh0r3y46asf8aad9dc190ggmi0iv018x2r7nr35qsm0b95h60z"; depends=[Rcpp RcppArmadillo]; }; + HELP = derive2 { name="HELP"; version="1.50.0"; sha256="1clk8qg1wj9drji2byqc2dbh4xskf3mz86bibq8lkncjanivzvpk"; depends=[Biobase]; }; + HEM = derive2 { name="HEM"; version="1.64.0"; sha256="12i3m68knr3jrry0m808msgijvxn3kkrmjwrddcbx331d16lmgq5"; depends=[Biobase]; }; + HGC = derive2 { name="HGC"; version="1.0.3"; sha256="1dpkxc9pbjawwcnrgmbfxf7la5jd69aba5rf1xif8ka1sgm6h1fy"; depends=[ape dendextend dplyr ggplot2 Matrix mclust patchwork RANN Rcpp RcppEigen]; }; + HIBAG = derive2 { name="HIBAG"; version="1.28.0"; sha256="0bfpvz13zzhl58c5cs1c28vsqy491l5ssgvpdpgj954l477115rk"; depends=[RcppParallel]; }; + HIPPO = derive2 { name="HIPPO"; version="1.4.0"; sha256="1q83a3iq37h1nxa1r5ng7d1jaxvbcmwq1pl1yxg3bv8cjcv9l0di"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; }; + HIREewas = derive2 { name="HIREewas"; version="1.10.0"; sha256="0bqwxghmi051ijmg1w97955bk8hlgshg39amdrgpsaalswvp8bi5"; depends=[gplots quadprog]; }; + HMMcopy = derive2 { name="HMMcopy"; version="1.34.0"; sha256="1pjlcv93gcmg378020aia6j36h9m9a2iw7sv8hxf6sl22qzccxq2"; depends=[data_table]; }; + HPAStainR = derive2 { name="HPAStainR"; version="1.2.1"; sha256="1bmk6xpa7j4sk02zrhvhyx7h5jifzgjpq8jfydaz45dkrnxpcizv"; depends=[data_table dplyr scales shiny stringr tibble tidyr]; }; + HPAanalyze = derive2 { name="HPAanalyze"; version="1.10.0"; sha256="14sv35caghdgg48s2n8fn63lpnpyb76aqgkcq201n89c9k1kscm2"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; }; + HTSFilter = derive2 { name="HTSFilter"; version="1.32.0"; sha256="1vvxiifqh28kv7anbi97mbivzj4f0f8nw79si09qrw4v1vwadv62"; depends=[Biobase BiocParallel DESeq2 edgeR]; }; + HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.22.0"; sha256="1f1lkd6pddfvy88mvkaym1szjixrlcyah7pwjaclh149n53cyl5c"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; + HTqPCR = derive2 { name="HTqPCR"; version="1.46.0"; sha256="1y3ik5a9w66jby6682jfm8mn2883s8yfv4xw8a8v1f6q2d1j938l"; depends=[affy Biobase gplots limma RColorBrewer]; }; + Harman = derive2 { name="Harman"; version="1.20.0"; sha256="08kjvi0lc9j5fcd0wq144kn2chlgl4fgfvrzhjz3k032qsssnkck"; depends=[Rcpp]; }; + Harshlight = derive2 { name="Harshlight"; version="1.64.0"; sha256="08qjfpxb01qkfqvfybndnsqpz7lad31p0sfb6bawlymd6w7n7iz9"; depends=[affy altcdfenvs Biobase]; }; + Heatplus = derive2 { name="Heatplus"; version="3.0.0"; sha256="0xwg3sxmihg3p6v3nxgrqy0nrqxi6razg3b3rjh2gcb2vv8gcqng"; depends=[RColorBrewer]; }; + HelloRanges = derive2 { name="HelloRanges"; version="1.18.0"; sha256="018mc1l0qrsn1zhlffcj4nviycs9armqqbllw5aqdqc27l8qqqw0"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + Herper = derive2 { name="Herper"; version="1.2.0"; sha256="0s8v80wpz8dvj7nrnks4dmajrz9i52vszcscv57ljjwyr0didd4n"; depends=[reticulate rjson withr]; }; + HiCBricks = derive2 { name="HiCBricks"; version="1.10.0"; sha256="0ywqdrnklj6b7vs4r5zw1hw68ss9bhdnqn5y68l4pjzx43a4v963"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; }; + HiCDCPlus = derive2 { name="HiCDCPlus"; version="1.0.0"; sha256="1abkg1gwl6qq5m3hmvjca1967d4b6yfxzypn7afkjkpmghjyxhcl"; depends=[bbmle Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicInteractions GenomicRanges InteractionSet IRanges MASS pscl R_utils Rcpp rlang rtracklayer S4Vectors tibble tidyr]; }; + HiCcompare = derive2 { name="HiCcompare"; version="1.14.0"; sha256="0c7chw35k3n4rns00zlh6ijlir0ydcn04hxhvigdd1v1d7j7rxwp"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; }; + HiLDA = derive2 { name="HiLDA"; version="1.6.0"; sha256="0kdnnr3dk0aspn3yzl509vh1jcg03lf58i8n1cdlxgzn6hsg23z4"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; }; + HiTC = derive2 { name="HiTC"; version="1.36.0"; sha256="0s3kfqs3zlmq61hxdmxpmi9gfs9w3byckw7xzp1hrhdbsl46yvgq"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.22.0"; sha256="05brlfvyb47kjk9vah9a7p3348v0m7mnbcx5fjh3jp47mci46r5g"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.50.0"; sha256="1fiycg4zkkgb5jynxv6jglc9x3skr9s4xf9aisywgkv2rv4hhk13"; depends=[lattice]; }; + HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.50.0"; sha256="1685p65kf827ynbcxfb6dsp5bn7xjgwvrcp8q958jir84ma1glzf"; depends=[HilbertVis]; }; + HubPub = derive2 { name="HubPub"; version="1.0.0"; sha256="00hrhhdahp5dccxad1i7q1wgn4fbdrw01jpa2vdx13f2dqzhwvls"; depends=[available aws_s3 BiocManager biocthis dplyr fs usethis]; }; + HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.8.1"; sha256="1wwhcm1v30mdgwixfnn9lrbwc6v61z3zkh71vfkc6gbrh588xl8h"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; }; + HybridMTest = derive2 { name="HybridMTest"; version="1.36.0"; sha256="1xfri7da9wp38292b29l9rw6rabafv119baj7a4q238vfp6jjp9h"; depends=[Biobase fdrtool MASS survival]; }; + IHW = derive2 { name="IHW"; version="1.20.0"; sha256="0b393a8ayzbnrgkk562w1dj7avacpb3wc7yq7awiki24wi5g2lfw"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + ILoReg = derive2 { name="ILoReg"; version="1.2.0"; sha256="1fxfv7p3bjaam49pria2p9ggq0qnmzx2kjlsp2z53anvnp8dw9zb"; depends=[aricode cluster cowplot dendextend DescTools doRNG doSNOW dplyr fastcluster foreach ggplot2 LiblineaR Matrix parallelDist pheatmap plyr reshape2 RSpectra Rtsne S4Vectors scales SingleCellExperiment SparseM SummarizedExperiment umap]; }; + IMAS = derive2 { name="IMAS"; version="1.16.0"; sha256="1mlmafjav922v0my4igk125i8vi7crjgxy6495m2fqyzx549lq30"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; + IMMAN = derive2 { name="IMMAN"; version="1.12.0"; sha256="1p71cjdvhwik28xz58zyk41690l5szr65hpb64301r0zm7kj8fad"; depends=[Biostrings igraph seqinr STRINGdb]; }; + IMPCdata = derive2 { name="IMPCdata"; version="1.28.0"; sha256="12ayi1dyxhhls3dm7arypv8l1ab7sh8bmpc2y0dw6fnmax6fyn4a"; depends=[rjson]; }; + INDEED = derive2 { name="INDEED"; version="2.6.0"; sha256="12xymfyll6k3xc4whjxm7v3gb9kgy06pivid2h3rfhsccj9kx504"; depends=[devtools glasso igraph visNetwork]; }; + INPower = derive2 { name="INPower"; version="1.28.0"; sha256="0mwslnp1h9700whalbq5r878kyx2cfwjpv23nhbac0sry4afvz6z"; depends=[mvtnorm]; }; + INSPEcT = derive2 { name="INSPEcT"; version="1.22.0"; sha256="0jh5db9dv5pb6b50sg22x8q55m3h0h0nkmb9mivvvp22dhyrd82z"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + IONiseR = derive2 { name="IONiseR"; version="2.16.0"; sha256="0fknlwdfd49v09zspg0337b0zzc8hqza3563yrw51viw3g35d6q3"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; + IPO = derive2 { name="IPO"; version="1.18.0"; sha256="1c3kf51n6p9331r85pm8al0x7ykwvbm9bcmknj2fpgb159dsdasd"; depends=[BiocParallel CAMERA rsm xcms]; }; + IRISFGM = derive2 { name="IRISFGM"; version="1.0.0"; sha256="0mjj9a13b6n2pldicdk53hqm4rqrd4nm8r2iv6wm37y1kwp66sqr"; depends=[AdaptGauss AnnotationDbi anocva clusterProfiler colorspace DEsingle DrImpute ggplot2 ggpubr ggraph igraph knitr Matrix MCL mixtools org_Hs_eg_db org_Mm_eg_db pheatmap Polychrome RColorBrewer Rcpp scater scran Seurat SingleCellExperiment]; }; + IRanges = derive2 { name="IRanges"; version="2.26.0"; sha256="0dzj8wqbjzilh2dsaj3ylx958xqrv0c688ayfq2r1z7rs75qy7kx"; depends=[BiocGenerics S4Vectors]; }; + ISAnalytics = derive2 { name="ISAnalytics"; version="1.2.1"; sha256="042m7iwqzg5hfbl5gmwiyhpjv6a6bfb0fxkidzpxsrghr7vdxar7"; depends=[BiocParallel data_table dplyr fs ggplot2 ggrepel htmltools lifecycle lubridate magrittr plotly psych purrr Rcapture reactable readr readxl rlang stringr tibble tidyr upsetjs zip]; }; + ISoLDE = derive2 { name="ISoLDE"; version="1.20.0"; sha256="06r51d6f5vrzn9nfwssj3wca8sccr76jf8hwf8h3yc89pw2cvag8"; depends=[]; }; + ITALICS = derive2 { name="ITALICS"; version="2.52.0"; sha256="0c4bli316kamlvwklj67ysp82xkiiilym7b6cbmk1x8vv9fgwslm"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; + IVAS = derive2 { name="IVAS"; version="2.12.0"; sha256="0ya17p7lzffamhg7q4manqk64pnn32fcas7fsbpx9cch3vzhf29k"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; + IWTomics = derive2 { name="IWTomics"; version="1.16.0"; sha256="146cm1lbfkgagys1mkir4dq4ymcsn0xyi44171g31by1vjnbjvq0"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; + Icens = derive2 { name="Icens"; version="1.64.0"; sha256="1rzgwxx4w2bqsaz0xmkhi4w9zsxgms80xf59zg1xp1camyhaihlz"; depends=[survival]; }; + IdeoViz = derive2 { name="IdeoViz"; version="1.28.0"; sha256="17sx0v5lq2zmg098ps4ksj1h0yla3vlh6s2w1ahqsq0nvm193scm"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; + IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.6.0"; sha256="0ix535avl0mi0fak7q989gba8wpai70skxri8xrc0rpsl5wwm8cl"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.20.0"; sha256="1wjayzcz71wrzrxjqn44da03lcaxic4gj8bzgic0247c6h7a4m8b"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; }; + InPAS = derive2 { name="InPAS"; version="2.0.0"; sha256="1qx900vm0qagbn647xcjns613hngxzpy49wkd0w9h4c7aqz0yyw4"; depends=[AnnotationDbi Biobase BiocParallel Biostrings BSgenome cleanUpdTSeq DBI depmixS4 dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges limma magrittr plyranges preprocessCore purrr readr reshape2 RSQLite S4Vectors]; }; + InTAD = derive2 { name="InTAD"; version="1.12.0"; sha256="1s53fs7cvczf5x4cy9ak7wmbg9jp6r3lb3a51dm4y94brx18n1wf"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; + Informeasure = derive2 { name="Informeasure"; version="1.2.0"; sha256="0igkvp2djr858b4i0qs9zlj4a425066pb5zb9mv4x05biky8jd1k"; depends=[entropy]; }; + IntEREst = derive2 { name="IntEREst"; version="1.16.0"; sha256="1yslvjxz5sqh46k57lrv3226g74rhdy7xxhis4frr13i7i8h020a"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; + InterCellar = derive2 { name="InterCellar"; version="1.0.0"; sha256="0kjadprm92s60nsky7bxbp0dfqrm9s169kab4cf8h60xcf9rm4gs"; depends=[biomaRt circlize colorspace colourpicker ComplexHeatmap config data_table dendextend dplyr DT factoextra fmsb fs ggplot2 golem htmltools htmlwidgets plotly plyr readxl rlang scales shiny shinyalert shinycssloaders shinydashboard shinyFeedback shinyFiles signal tibble tidyr umap visNetwork wordcloud2]; }; + InterMineR = derive2 { name="InterMineR"; version="1.14.1"; sha256="1p7dvn2s2xq39zxxbmqma0i2ha0nj9bl65awp2h5b0yrqx12ia0v"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.20.0"; sha256="034xidjmn67n1471fnpdmz7gjm6p05cj8sp9nssc3gxdzn54a6xb"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; + InteractiveComplexHeatmap = derive2 { name="InteractiveComplexHeatmap"; version="1.0.0"; sha256="0i6n49vac0pzimx82hk4ssfc21hml68j5is3czl4m40sn541s4gv"; depends=[clisymbols ComplexHeatmap digest GetoptLong htmltools IRanges jsonlite kableExtra RColorBrewer S4Vectors shiny svglite]; }; + IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.10.0"; sha256="05vqn4y2qrvgap8fl7cqc5qmg4aqc09bn0n6n527h1zsjkvam7w8"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; + IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.8.0"; sha256="1xqqfvbwnfg45ajkk55138px3plsdjgmzdd6rnj5lq7pbykxlf1m"; depends=[IsoCorrectoR readxl tcltk2]; }; + IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.28.0"; sha256="0vnlja5r982m38vayy4njgybpy6da17vvi959qvwlrfglkk29l77"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; + IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.14.0"; sha256="0m6y227jyd0009cphrm2g06j9m9js5n02akdan5k31v2migz0bm1"; depends=[Biobase BiocGenerics Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer RCurl readr reshape2 rtracklayer stringr tibble tximeta tximport VennDiagram XVector]; }; + KBoost = derive2 { name="KBoost"; version="1.0.0"; sha256="15x0n45v5qjb4qgp4hdw0cvwc49fwgpn4j41qhixn6c3dbyn0588"; depends=[]; }; + KCsmart = derive2 { name="KCsmart"; version="2.50.0"; sha256="0fz7pn7z9yyvi9k5va4imjr2bk62jf6gvyymm0jcmw1dlca3g6i7"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.32.0"; sha256="15313d20v3ziyn52fhc6fbzcy1kxjkdx18124bxhdfd14f4aypcd"; depends=[Biostrings httr png]; }; + KEGGgraph = derive2 { name="KEGGgraph"; version="1.52.0"; sha256="0zxdph5hzr3kzj2g1mjqpiviwa189a5sq4bw7wiry6r79fdnklqs"; depends=[graph RCurl Rgraphviz XML]; }; + KEGGlincs = derive2 { name="KEGGlincs"; version="1.18.0"; sha256="1k1b1d0nzp3psk1qx5mcz6l8had1ymfdnm1xn0rmwzgny5mzcma0"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; + KinSwingR = derive2 { name="KinSwingR"; version="1.10.0"; sha256="0zj16im3j2kvgi84mgpk0x8kqp8l831zkqcvjn27y73dvniiycby"; depends=[BiocParallel data_table sqldf]; }; + KnowSeq = derive2 { name="KnowSeq"; version="1.6.1"; sha256="146715xrgdc45m0qbr07kn91glf37vqicbryaqng7n788m2d0nsb"; depends=[caret cqn e1071 edgeR ggplot2 gridExtra Hmisc httr jsonlite kernlab limma praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; }; + LACE = derive2 { name="LACE"; version="1.4.0"; sha256="1v4nsm4bx6kmsx6ivwn18zki4h9yri4mpigaqpwi1flfbfgm9wa5"; depends=[data_tree igraph RColorBrewer Rfast SummarizedExperiment]; }; + LBE = derive2 { name="LBE"; version="1.60.0"; sha256="0fd8qihzy7v7zzn1kky3ja7k3n4mav3myi2bkdrlw7nhrxsx1hys"; depends=[]; }; + LEA = derive2 { name="LEA"; version="3.4.0"; sha256="10pbaq5lmc1w1jpplvxxmpqjmf6c0k9hxd8l8c209ldwsxnhjn6a"; depends=[]; }; + LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.18.1"; sha256="1vbai8gz3rdhfr7x28lc6xyiqh0zj95kdmbpsr2blgm0analnx46"; depends=[CAMERA xcms]; }; + LOLA = derive2 { name="LOLA"; version="1.22.0"; sha256="0a7ywik5dxb12xivllwjr3mp9q0r8692qarv6inzbpigby5cgnyi"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; + LPE = derive2 { name="LPE"; version="1.66.0"; sha256="1nakn89bdmrlbh97finab4b5myyq25j8vnysp7x325kw10arrfrw"; depends=[]; }; + LPEadj = derive2 { name="LPEadj"; version="1.52.0"; sha256="1zn3fl0fs4nfbcyhrb8f3gfgidha36ryrlsblpm3bg36f21v59zs"; depends=[LPE]; }; + LRBaseDbi = derive2 { name="LRBaseDbi"; version="2.2.0"; sha256="0h1hnbw0dvd4scya4x29nrpwjx9yzhbkvv9il5d4xmhpr22ccm08"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + LRcell = derive2 { name="LRcell"; version="1.0.0"; sha256="0aaqmdn0jlwdm240v3i0cjqj1xgh0r491162bdczxy843czrlq26"; depends=[AnnotationHub BiocParallel dplyr ExperimentHub ggplot2 ggrepel magrittr]; }; + LedPred = derive2 { name="LedPred"; version="1.26.0"; sha256="0bqkjs53v75x8qn9h8cxrj4dpkng71p1mr4lzhaihx7fww035q0i"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + LineagePulse = derive2 { name="LineagePulse"; version="1.12.0"; sha256="0k0saiq2m5fzg9d9av6nphn6gpzl33m5idy3vskf2zdbhmkw31yc"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; + LinkHD = derive2 { name="LinkHD"; version="1.6.0"; sha256="100q61dxpwy0qaifld4vmyz92x25fjfynn369qnjw189ba1kgvff"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; }; + Linnorm = derive2 { name="Linnorm"; version="2.16.0"; sha256="035hrniycqadmkwg8rmzw8szv0amhy31390izy91rfrld31v2yy7"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; + LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.46.0"; sha256="1daaz18ab3qdfv8q9121jqiivvfljknrm3gmm7ky8pr5yph0irqj"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; + LoomExperiment = derive2 { name="LoomExperiment"; version="1.10.1"; sha256="1wlc13z93xrj86gfh3c8pbx3jja08pqnwk6zafflr2vhfj1b3ckl"; depends=[BiocIO DelayedArray GenomicRanges HDF5Array Matrix rhdf5 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + LowMACA = derive2 { name="LowMACA"; version="1.22.0"; sha256="19x29p290yxy8lcjdb951p5cnxwzmk4q5jfpdlpjshln7g806d88"; depends=[BiocParallel Biostrings cgdsr data_table gridBase httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.20.0"; sha256="0s88rrhq5lpajllqz1swxlwc9srzyv0paz20xv400jdlwfz69vn4"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; + M3C = derive2 { name="M3C"; version="1.14.0"; sha256="17gj4haa4ywc6bmppm342jzppl3inqa94235yspikij6c098vrmc"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; }; + M3Drop = derive2 { name="M3Drop"; version="1.18.0"; sha256="04yq38xdpwl0v206ivqj6szyznwdpm39chnmhqrwbal9aa7861v4"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; }; + MACPET = derive2 { name="MACPET"; version="1.12.0"; sha256="0rz5813fg2l1q4pp07qj108rfq7csnjq623cz62rpnb7v3813dx0"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; + MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.6.0"; sha256="0qrbxm3ny7a6l587cxk01lb8s6fni42as40zhhk8fyd2fm4cc8ii"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; }; + MACSr = derive2 { name="MACSr"; version="1.0.0"; sha256="0a2ywmwi7xggh1gx94q8yvm74mqllmhyy07y9qkmhgnlb2v1438i"; depends=[AnnotationHub basilisk ExperimentHub reticulate S4Vectors]; }; + MADSEQ = derive2 { name="MADSEQ"; version="1.18.0"; sha256="1a5mhns830av73bp29yzzlg990alkz7rs43648cl0v2hh78300y1"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; + MAGAR = derive2 { name="MAGAR"; version="1.0.1"; sha256="0aqnkmznfs6nl9iwn41hah606mlgwhz8xsc445y8ifc0xs3bllzw"; depends=[argparse bigstatsr crlmm data_table doParallel ff HDF5Array igraph impute jsonlite plyr reshape2 rjson RnBeads RnBeads_hg19 snpStats UpSetR]; }; + MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.12.0"; sha256="0fhbsb2z8nv1r9mhxsdgb1mp5x96p2zry0ikrmn4a8rrz0wwvm56"; depends=[Biobase clusterProfiler enrichplot ggplot2 ggrepel gridExtra reshape2]; }; + MAIT = derive2 { name="MAIT"; version="1.26.0"; sha256="1krkcvppa5zbl5i7pj5lh0pi9c0n8fs64dsglvr0m5ym7knj7kr4"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; + MANOR = derive2 { name="MANOR"; version="1.64.0"; sha256="022j9fwqii2i524g97pqfj7n6zj2jm44ccd7937lyjzsylvm51hp"; depends=[GLAD]; }; + MAST = derive2 { name="MAST"; version="1.18.0"; sha256="1gkpagam5rap36viyr3n4psa658x9vckrxap1h67jasiiyrcfz2d"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; + MBASED = derive2 { name="MBASED"; version="1.26.0"; sha256="0mmlsd5sc8y6w1gg93ic2jixlvxzhnj2qb20sh1zv5b0lyfmif8z"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; + MBAmethyl = derive2 { name="MBAmethyl"; version="1.26.0"; sha256="1lfxygbwvygpv99wrxgyc5dbz0ih4ggbvf5f5a9s5wnkpvf9jylf"; depends=[]; }; + MBCB = derive2 { name="MBCB"; version="1.46.0"; sha256="19a06dwdmznj6qhyrplkcxdlc4983q54bay5bjvbxr43vik7b4df"; depends=[preprocessCore tcltk2]; }; + MBQN = derive2 { name="MBQN"; version="2.4.0"; sha256="0nq41kk2rw1jh7rs89dr31bjqdd5z40mya4k1cwa7dah03s96q5q"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rpx SummarizedExperiment xml2]; }; + MBttest = derive2 { name="MBttest"; version="1.20.0"; sha256="0cr3bcdlbd3khx96hk2561ifm7s3v6ari8wbg1c5scji460n4dyk"; depends=[gplots gtools]; }; + MCbiclust = derive2 { name="MCbiclust"; version="1.16.0"; sha256="0dhxdd66x094nyspr86hwjlkpva41r5qacc5s7ipn9lyrlrq51f1"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; + MDTS = derive2 { name="MDTS"; version="1.12.0"; sha256="04fazzkqq0vr0rjzzcd2sikfh9fmll8jh28030q3j7y8aibb9fj5"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; + MEAL = derive2 { name="MEAL"; version="1.22.0"; sha256="0ydbxsbwlrhkzgx0fnrvy17qn3apzxp5wk1mm8833fg3gb3k3maw"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; + MEAT = derive2 { name="MEAT"; version="1.4.0"; sha256="111ks2734xx3giay9svaksxymgc58g7rljvinds5n1r2ncsfaz5y"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; }; + MEB = derive2 { name="MEB"; version="1.6.0"; sha256="166mxzv5y524k20ssv2xdwiyp06k483ry7mp8xq34rwqvnv6jgkw"; depends=[e1071 SummarizedExperiment]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.44.0"; sha256="0l57a5hz0lr3snaqb73bprrd1jk2hpq6qjicg7yaypr7hv1csa1i"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEDME = derive2 { name="MEDME"; version="1.52.0"; sha256="19kw0dsarylvzmmmh6hrvwgzp2d5v2d3c096x1w77y03q2261gmm"; depends=[Biostrings drc MASS]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.26.0"; sha256="1b657d7xfcx9rkf4ilpjvad8296x36cj5sixp7xh4iyy7i1y4r8s"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.26.0"; sha256="08nb9cdxmcs4pfk3i0g5w6dn0flxvl2hdvvzr4578r4l79qcc3da"; depends=[annotate AnnotationDbi]; }; + MGFR = derive2 { name="MGFR"; version="1.18.0"; sha256="1gk7rzm5r7adm8grslpnhg4hx2jj7m75280br5g6ikgzz76q23n5"; depends=[annotate biomaRt]; }; + MIGSA = derive2 { name="MIGSA"; version="1.16.0"; sha256="0mhbjb7scrmnvaimk8b3jfdwda1vkh6zqhc1qyd6w86wji3pqqk0"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev jsonlite limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz vegan]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.30.0"; sha256="078myiqzrkv3f17mafqjd8znsmhv2mpsc5rdwf1yicj88shc2q3g"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; }; + MIRA = derive2 { name="MIRA"; version="1.14.0"; sha256="0pymi0zcv16x7g4f0kj9cfa7fjcxpphlwvjq1sdy74p8lkmzcqfs"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.72.0"; sha256="0ipzv7wdvfqhdyjiak956qq201igsdxm6dr6rh3dj6cssgsrnrpb"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter magrittr MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny threejs]; }; + MLP = derive2 { name="MLP"; version="1.40.0"; sha256="0nnvnlkngipsdgky489hdwyazg9iqp5xqv8m3zjgn55p07yw6j3l"; depends=[AnnotationDbi gplots]; }; + MLSeq = derive2 { name="MLSeq"; version="2.10.0"; sha256="0yww4w66rjbk3gbj86wd07i2z6ic4vjcxy7cacrvbvwkjbdxkzb4"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; + MMAPPR2 = derive2 { name="MMAPPR2"; version="1.6.0"; sha256="0dgsszfv3pgmbnns5pxaixkfni5k4c995247cfvkmz5gbwrlfh1g"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; }; + MMDiff2 = derive2 { name="MMDiff2"; version="1.20.0"; sha256="1k7zgn9m7plfqqjsw6rlwcf28cysp3xg05krz8qii066plms291f"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; + MMUPHin = derive2 { name="MMUPHin"; version="1.6.1"; sha256="0p2szcbk2rrxzg2j43fw7rv9n32flwwk399yma9mqi0jrsh9wqsk"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor tidyr]; }; + MODA = derive2 { name="MODA"; version="1.18.0"; sha256="02yzc9sg2yqbr05zxw2mqd2fizy0r0fh0g6wszljzcabbadwxbcn"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; + MOFA2 = derive2 { name="MOFA2"; version="1.2.2"; sha256="1hx1bgcyjcs5kan13dg2i4a43m3p0981cqdxizrz1j43xf6h26ln"; depends=[basilisk corrplot cowplot DelayedArray dplyr forcats ggplot2 ggrepel HDF5Array magrittr pheatmap RColorBrewer reshape2 reticulate rhdf5 Rtsne stringi tidyr uwot]; }; + MOGAMUN = derive2 { name="MOGAMUN"; version="1.2.1"; sha256="1x0v7ha2a3ldqiwxyn9l9z2frbshpn04k5zy8rxhbk447b0hca5z"; depends=[BiocParallel igraph RCy3 RUnit stringr]; }; + MOMA = derive2 { name="MOMA"; version="1.4.0"; sha256="0pig4kcr1bwwvg4shy20w8dnx9q3l9faz19qxn8d6hmd6ff91yhz"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; }; + MOSim = derive2 { name="MOSim"; version="1.6.0"; sha256="0dy0z5fbhhh4vwn2dd5cdkdfc5vwjxl408lszvyhvlszacq5viq4"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; }; + MPFE = derive2 { name="MPFE"; version="1.28.0"; sha256="17y8cahvrp9x29dd59ybhcxvdiw1n2gj08zv2yfycbksvarymlpp"; depends=[]; }; + MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.10.0"; sha256="16p9gc40m3c6m2vrzj1k3sjfxi67xg7j09ssrahlw3lak5pf7412"; depends=[BiocParallel progress SummarizedExperiment]; }; + MQmetrics = derive2 { name="MQmetrics"; version="1.0.0"; sha256="0ndh271scf4kv8rkx6h0yjwkspxkr6rn5zh89dm45hhmp5dahm1a"; depends=[chron cowplot dplyr ggforce ggplot2 ggpubr ggridges gridExtra gtable knitr magrittr plyr purrr RColorBrewer readr reshape2 rlang rmarkdown scales stringr tidyr]; }; + MSEADbi = derive2 { name="MSEADbi"; version="1.2.0"; sha256="1g1kg3nh7iwg5nrpmig6srw6as4yfwmbqn965pffrk0zp19llsbf"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.26.0"; sha256="05gg4a7a3w7g0mhmcycn3w9p714w1d1jgfxs29ifk50c5ji95gxp"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.26.0"; sha256="069vn4bjb4xlgn0msrj56gx5rmm5zh35y00045q1jjv4w6q58c5w"; depends=[mzID ProtGenerics]; }; + MSPrep = derive2 { name="MSPrep"; version="1.2.0"; sha256="1d27gvrz8vs9wvcmq8ld4nyl6aklmxa955k8qah8c4xsb2swwqvi"; depends=[crmn ddpcr dplyr magrittr missForest pcaMethods preprocessCore rlang S4Vectors stringr SummarizedExperiment sva tibble tidyr VIM]; }; + MSnID = derive2 { name="MSnID"; version="1.26.0"; sha256="0r3vgigf4fk0xzfg8gcvad01jdh0fysh6x22m9qy77x6glyrxcj2"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics BiocStyle Biostrings data_table doParallel dplyr foreach ggplot2 iterators msmsTests MSnbase mzID mzR ProtGenerics purrr R_cache Rcpp reshape2 rlang RUnit stringr tibble xtable]; }; + MSnbase = derive2 { name="MSnbase"; version="2.18.0"; sha256="1z7s17j6zgb70m0khyf9icqlnbnzlivca7vw7j0vxyw417ld9lkr"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS MsCoreUtils mzID mzR pcaMethods plyr ProtGenerics Rcpp S4Vectors scales vsn XML]; }; + MSstats = derive2 { name="MSstats"; version="4.0.1"; sha256="1x5cxz4i65fv055ksj6jsiaj60px457hqkhp58rhvaf8cg9gvf8c"; depends=[checkmate data_table ggplot2 ggrepel gplots limma lme4 marray MASS MSstatsConvert preprocessCore Rcpp RcppArmadillo survival]; }; + MSstatsConvert = derive2 { name="MSstatsConvert"; version="1.2.2"; sha256="1mwxlbv7jb61in0zsrsy09prhgv54nh5wkj3zcs89lgvc813jgpm"; depends=[checkmate data_table log4r stringi]; }; + MSstatsLOBD = derive2 { name="MSstatsLOBD"; version="1.0.0"; sha256="09mlgcvj7a30c6rryr1zx7743gxpwcz7xyxcvfgd4ci492i3s670"; depends=[ggplot2 minpack_lm Rcpp]; }; + MSstatsPTM = derive2 { name="MSstatsPTM"; version="1.2.3"; sha256="11na5g9k12c68br23bn23ibbnaa4h98vx50hyh3q740cz6vphffz"; depends=[Biostrings checkmate data_table dplyr ggplot2 ggrepel gridExtra MSstats MSstatsConvert MSstatsTMT Rcpp stringr]; }; + MSstatsQC = derive2 { name="MSstatsQC"; version="2.10.0"; sha256="0z62xy689qbbwak6j1kqhagm0z8k9m7c8sdns59mc0xz1s6valh8"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; }; + MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.12.0"; sha256="0jr8x1fv648kky5w6438hdj9w151a7mbb4z28nds60k44bvk521v"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; }; + MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.6.0"; sha256="0cyddrm3wj28apik58wnm698gwbz5d8q5b7w4x1mp2qsp7af6c7y"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; }; + MSstatsTMT = derive2 { name="MSstatsTMT"; version="2.0.1"; sha256="117p64fagkyykx8iiyiijdmkqpz9mk5r4r978g6g89677jj2nspj"; depends=[checkmate data_table ggplot2 limma lme4 lmerTest MSstats MSstatsConvert]; }; + MSstatsTMTPTM = derive2 { name="MSstatsTMTPTM"; version="1.1.2"; sha256="16qnddwhwhjjfr5akdrmp93gkxq2r41s82hb1blbz47lwbj5kaj5"; depends=[dplyr ggplot2 gridExtra MSstatsTMT Rcpp reshape2 stringr]; }; + MVCClass = derive2 { name="MVCClass"; version="1.66.0"; sha256="1di7y10mr7caacd6igwxnr62cm4v1x877yi4a2i5jqz1058jqni7"; depends=[]; }; + MWASTools = derive2 { name="MWASTools"; version="1.16.0"; sha256="1sj3z91ahqmw1ph0rpd7bh6chcqwy2c5zy64blhn9p227l8446vg"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; + Maaslin2 = derive2 { name="Maaslin2"; version="1.6.0"; sha256="1fc0ch1pdnsq7mbc64l7c4a9mfia4ad3qgd868g34736vfvh8hqg"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 glmmTMB hash lmerTest logging lpsymphony MASS metagenomeSeq MuMIn optparse pbapply pcaPP pheatmap pscl robustbase vegan]; }; + MantelCorr = derive2 { name="MantelCorr"; version="1.62.0"; sha256="1l5hr5c1dq5xxpndr0xknw29hn32qh94b20f2nwbvyj2pqkrsl2v"; depends=[]; }; + MassArray = derive2 { name="MassArray"; version="1.44.0"; sha256="13fvd4q5wg523hfzf2329256sw9z4cdvfr8priph1jbr3rxy99ym"; depends=[]; }; + MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.58.0"; sha256="1cs32sig1yvqn9xs0cvhfpmkh2lbllx7aab80sz58x03wnx8v60z"; depends=[waveslim]; }; + MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.4.3"; sha256="1yir3rwhz5vf0pdn3fpvlc57c75k98gvv8gapajbvymz3lyghijv"; depends=[matrixStats]; }; + MatrixQCvis = derive2 { name="MatrixQCvis"; version="1.0.0"; sha256="1yn7jrkq2ill7hwv6432a5yv4xcr3fyj4hqsw0a4g7y2iqnp0sif"; depends=[ComplexHeatmap dplyr ggplot2 Hmisc htmlwidgets impute imputeLCMD limma openxlsx pcaMethods plotly proDA rlang rmarkdown Rtsne S4Vectors shiny shinydashboard shinyhelper shinyjs SummarizedExperiment tibble tidyr umap UpSetR vegan vsn]; }; + MatrixRider = derive2 { name="MatrixRider"; version="1.24.0"; sha256="0w7iiz3spps0dzdbf5xacwlbcwhgdxcjris7g0gffkzz7ij5ck27"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.28.0"; sha256="1aw7s3sr89w1sxj4wrnzj0hiigzk1arg0vq3790gnqrsy7sgips5"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.64.0"; sha256="1irdsjf3aj8i0ip9ciiv6wwq6j2lqfjsbz22r7qhjihy3ll2xj5x"; depends=[]; }; + Melissa = derive2 { name="Melissa"; version="1.8.0"; sha256="1j80nkhpnm16blpzw3m7x15hk119k9zdday8rypskqc246i4jljy"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.20.0"; sha256="0iycnnjd1xsc9gygi9fa0nfpx8y9803x6pjwckfb0n4ssxg0mj6n"; depends=[]; }; + MesKit = derive2 { name="MesKit"; version="1.2.0"; sha256="14rzsfr33dn8zvvys75fxzsrk962y30j4ka5rmyrc1p7ck4wv8cw"; depends=[AnnotationDbi ape Biostrings circlize ComplexHeatmap cowplot data_table dplyr ggplot2 ggrepel ggridges IRanges mclust phangorn pracma RColorBrewer S4Vectors tidyr]; }; + MetCirc = derive2 { name="MetCirc"; version="1.22.0"; sha256="0dv9w449578hsjspgppwv02gvmvyg58q37vlbkss7awny0vafs9v"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; }; + MetID = derive2 { name="MetID"; version="1.10.0"; sha256="1hg0awdkg65g0gp4cfyr8i4afhqf9w4sc8bl28im7b1h7wrrrjvx"; depends=[ChemmineR devtools igraph Matrix stringr]; }; + MetNet = derive2 { name="MetNet"; version="1.10.0"; sha256="0svhn9lv9rr29wyywznsfk4mnqn90h162hkf8zrq8cz3h25pr2k9"; depends=[BiocParallel bnlearn dplyr GENIE3 ggplot2 Hmisc mpmi parmigene ppcor rlang S4Vectors sna stabs SummarizedExperiment tibble tidyr]; }; + MetaCyto = derive2 { name="MetaCyto"; version="1.14.0"; sha256="00kprxq4n691ng26yaygps4fkakaq9jfi9gkypl62xij6y4h1ws1"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; + MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.12.0"; sha256="0gqlvnq7vdsggss93zbi95l8xgl47hhhlw7v4ygvb2p91b8id23k"; depends=[beanplot dplyr ggplot2 gplots igraph Matrix matrixStats RColorBrewer SingleCellExperiment SummarizedExperiment tibble tidyr]; }; + MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.6.0"; sha256="0xdlg7r1prjp1qvvl01ga2sn4r6br5h8zaigyyiq5xc3v5nm85cb"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; }; + Metab = derive2 { name="Metab"; version="1.26.0"; sha256="01w9zw7g0yyky7n449pirah8aid0dqkp2vkzh087324qd8k3wifd"; depends=[pander svDialogs xcms]; }; + MetaboCoreUtils = derive2 { name="MetaboCoreUtils"; version="1.0.0"; sha256="1i09mhlx9vld7akcc0bbipqbjk6clzza1szr5hgpn3iwda2c06qw"; depends=[stringr]; }; + MetaboSignal = derive2 { name="MetaboSignal"; version="1.22.0"; sha256="0d9wfg1ip5pldm8ywh4djgjp9m3xc9m7m1wrxyi3j8zfrcsg9b13"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; + MethCP = derive2 { name="MethCP"; version="1.6.0"; sha256="17mncz62pncq4zx524iib61nwyw3gw97mqbnn46zq9s4q100qada"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; }; + MethPed = derive2 { name="MethPed"; version="1.20.0"; sha256="177hmyb0r8yqlihhh8g2haaia29qwxqynj20ckmkbpixs3v37qql"; depends=[Biobase randomForest]; }; + MethReg = derive2 { name="MethReg"; version="1.2.1"; sha256="0q6blwrxyykd1zz83vhsr7yij8c8qf654wrgg3vkliyl8l2j0zss"; depends=[DelayedArray dplyr GenomicRanges ggplot2 ggpubr IRanges MASS Matrix plyr progress pscl readr rlang S4Vectors sesameData sfsmisc stringr SummarizedExperiment tibble tidyr]; }; + MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.24.0"; sha256="02ii6ibjlwp4kf2xqlsrqvcq52anc5nwnf0y6nldf150grjinpwh"; depends=[Biostrings gplots seqinr stringr]; }; + MethylAid = derive2 { name="MethylAid"; version="1.26.0"; sha256="0b6k79dv4n009jrzisqd7fq9mkr9r79krgnp8q7nmk88vq1fz4hv"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; + MethylMix = derive2 { name="MethylMix"; version="2.22.0"; sha256="0aw3jhmwsv8kk650kiwqsyb0agz07fi1kbp06wk3drd06gkswpwk"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.32.0"; sha256="0niybbcpny381qwip47i12dhp6zz4x4ayzwj3rvn4lsg63yqn9ml"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + Mfuzz = derive2 { name="Mfuzz"; version="2.52.0"; sha256="0njjln3w5nqrpi5ml2v16dhn7d3mr0nglbsy0grnxcld7z8h34yb"; depends=[Biobase e1071 tkWidgets]; }; + MiChip = derive2 { name="MiChip"; version="1.46.0"; sha256="10i7bq9qcwvhy7mh47zk9105837p68zd7cidl9pss6l6h03rszfm"; depends=[Biobase]; }; + MiPP = derive2 { name="MiPP"; version="1.64.0"; sha256="0g8vlbcwy7djfpgg3483hw65a6g472z7h329vqsrfk782i4wzglr"; depends=[Biobase e1071 MASS]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.34.0"; sha256="19y8kyirm0pzvv6p3dsnn9zws189anw5a2h2aiivgh6y6jis8g57"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; + MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.4.3"; sha256="0rbzsacz3sqpwslq9fvfa1mxa7n00bp8jf4z4i767q0d6xhy9v7v"; depends=[ape Biostrings coin dplyr foreach ggplot2 ggrepel ggsignif ggstar ggtree magrittr MASS patchwork rlang SummarizedExperiment tibble tidyr tidyselect tidytree treeio vegan zoo]; }; + MineICA = derive2 { name="MineICA"; version="1.32.0"; sha256="1cpy8fpfff0k0s4qxmis6351nk1v507a2jszg3hhw3aacbpm7gqp"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.36.0"; sha256="0jp2icr0z56d3phickr3dhgkmiapfl7z93mipzc7ll139m3ayzj8"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; + ModCon = derive2 { name="ModCon"; version="1.0.0"; sha256="1qd1545w6jgpd4xnqwbhv10yzn70lc3hslqr56gg30mc7p8qbkh8"; depends=[data_table]; }; + Modstrings = derive2 { name="Modstrings"; version="1.8.0"; sha256="1n8zhzh6zzamac2ss7wd2plbl1xcl0n8pvarljn6irai5cpigfl4"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; }; + MoonlightR = derive2 { name="MoonlightR"; version="1.18.0"; sha256="1mx97ym3l351gzfb12z4dmp7mc6wc4cqisbr9f10hnk7x303cbax"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; + MotifDb = derive2 { name="MotifDb"; version="1.34.0"; sha256="04cmgg5mw1cqbg95zyfc2imykmdxyff16w26rq97xghcxwiq2b3z"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; }; + MsBackendMassbank = derive2 { name="MsBackendMassbank"; version="1.0.0"; sha256="0wa1dzymkpjrh12p4d1vaw1rfy1rnm8hl18gb1q5qmw3c1qaniqn"; depends=[BiocParallel DBI IRanges MsCoreUtils ProtGenerics S4Vectors Spectra]; }; + MsBackendMgf = derive2 { name="MsBackendMgf"; version="1.0.0"; sha256="1d3x433js5ppypc312124g7i5h6mx94axlq8h8acqvgdd3pd4yqx"; depends=[BiocParallel IRanges MsCoreUtils S4Vectors Spectra]; }; + MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.4.0"; sha256="13g8a726vsyjs6m1kd42vf8avdnmhykxhl6z3j2njzkp2jg17pd8"; depends=[clue MASS Rcpp S4Vectors]; }; + MsFeatures = derive2 { name="MsFeatures"; version="1.0.0"; sha256="0i5xdhii7ls72xb5nkjimdka77rb7m3arz5z0ndc6kflhr6b0cbn"; depends=[MsCoreUtils ProtGenerics SummarizedExperiment]; }; + Mulcom = derive2 { name="Mulcom"; version="1.42.0"; sha256="0law2r7hf22jm8029s8yw1b03dmh3grpnjsp7gkavrmp5355rm9m"; depends=[Biobase fields]; }; + MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.18.0"; sha256="0l0arf3q1f6zy6pdgsy3h5n523sg1hlilv7lj7snr5814idgdj51"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; + MultiBaC = derive2 { name="MultiBaC"; version="1.2.0"; sha256="0c6vah8396vklwk8sqg3rapifaz0f527w5jw2ddpz2nmmnigy2b8"; depends=[ggplot2 Matrix MultiAssayExperiment ropls]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.20.0"; sha256="1hyk40xgmy50rqxwdvc64d3pgz5vsg8vmlj5cp5m0n5m0adxcdfj"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; + MultiMed = derive2 { name="MultiMed"; version="2.14.0"; sha256="1s23gf8vvi76k4z7qvw3zvfjqs0w5rg3lijfs8b4z23nphadv4gg"; depends=[]; }; + MungeSumstats = derive2 { name="MungeSumstats"; version="1.0.1"; sha256="1l9j0b3j6n4fi5c657h958kz88fzlcq5r7vfx9xhpy5y9di319k7"; depends=[Biostrings BSgenome data_table GenomicRanges]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="3.2.0"; sha256="0433i4xbz8hrfaj8fxgzps3x8dqrl5vgwzg7qmp4cy5sb1lw5wvs"; depends=[BiocGenerics Biostrings BSgenome cowplot dplyr GenomeInfoDb GenomicRanges ggalluvial ggdendro ggplot2 IRanges magrittr NMF pracma purrr S4Vectors stringr tibble tidyr VariantAnnotation]; }; + NADfinder = derive2 { name="NADfinder"; version="1.16.0"; sha256="19ikqix98ag7nqjjnhhrnsi89g4k3cxcqw3cwph91p1pcg3h5w3p"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + NBAMSeq = derive2 { name="NBAMSeq"; version="1.8.0"; sha256="05cqdrp5b7mad625ab43pdv5dkpgxd0q8g0r201066g0nrhzpxqg"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; }; + NBSplice = derive2 { name="NBSplice"; version="1.10.0"; sha256="1qspsqmvyv5nw3f0zzp2vffy82ld9lbix2wp6cci99m4jvvwdp14"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; + NCIgraph = derive2 { name="NCIgraph"; version="1.40.0"; sha256="0w517l2v6aqn9m2malmv482ydjw94sblrzwzfqfsh2lbyaxhbz8c"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; + NOISeq = derive2 { name="NOISeq"; version="2.36.0"; sha256="18d51dv2ygsm7kkwal341f1wrwrazyns0045j00vld367kic8jiz"; depends=[Biobase Matrix]; }; + NPARC = derive2 { name="NPARC"; version="1.4.0"; sha256="0s4mwv7pcxn79vivhysmyvg3vvqaf6snij1rsvj97lfrpn25zh9y"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; }; + NTW = derive2 { name="NTW"; version="1.42.0"; sha256="0q9kkrxn7bp9a5phhrg266cybxqbj5gqlbri9w9r91c91r95dxxg"; depends=[mvtnorm]; }; + NanoMethViz = derive2 { name="NanoMethViz"; version="1.2.0"; sha256="0gqis6n9wsxp127yvdfwm355iq7zfww1p0p3x1idhy75hmi08zpy"; depends=[AnnotationDbi assertthat bsseq cpp11 data_table dplyr e1071 forcats fs GenomicRanges ggplot2 ggthemes glue patchwork purrr Rcpp readr rlang Rsamtools RSQLite S4Vectors scales stringr SummarizedExperiment tibble tidyr withr zlibbioc]; }; + NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.22.0"; sha256="0qafspf90ydxrpm7rniyqwcz64lk91yxjdmq6ilnkxdixdmcnkvs"; depends=[Biobase matrixStats Rcpp]; }; + NanoStringNCTools = derive2 { name="NanoStringNCTools"; version="1.0.0"; sha256="1j0mnlhcklp9bmgd63b2nafnbglivdrjf9l1f3nfaagl4g3dkqll"; depends=[Biobase BiocGenerics Biostrings ggbeeswarm ggiraph ggplot2 ggthemes IRanges pheatmap RColorBrewer S4Vectors]; }; + NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.24.0"; sha256="0snkhb3krgl82ymbjqjbhavi38ipffvbrwr9w7j5qqlw0hhsa2dg"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; + Nebulosa = derive2 { name="Nebulosa"; version="1.2.0"; sha256="1l0hyb6gam83bmbjsx4zdvrwv434j4qnm1a9n91m6zqip0zaxmxc"; depends=[ggplot2 ks Matrix patchwork Seurat SingleCellExperiment SummarizedExperiment]; }; + NeighborNet = derive2 { name="NeighborNet"; version="1.10.0"; sha256="12d7drs7i66wbw75xsbmgada9p7zx6v4k7m8pym6ha4h52f22yd3"; depends=[graph]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.28.0"; sha256="17537qyh6bj82marikc2sfd79xkgfvh53y44raafjk2xxv1sbsc8"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.32.0"; sha256="1am52sa4v6b7zng03a403g66775n5sn1gcgfjk7s1q808n1bivaq"; depends=[AnnotationDbi biomaRt DBI doParallel foreach GO_db igraph R2HTML seriation survival WGCNA]; }; + NewWave = derive2 { name="NewWave"; version="1.2.0"; sha256="1f7n8lmkdwdr2pb9fgma9lvqn47bawnzr841gaaxyy1ww38dw512"; depends=[BiocSingular DelayedArray irlba Matrix SharedObject SingleCellExperiment SummarizedExperiment]; }; + NoRCE = derive2 { name="NoRCE"; version="1.4.0"; sha256="049vn903knz8fj6vbmlyvmxv5gi2v4v6ppv6w9xvi2gy6rpv32v4"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors SummarizedExperiment tidyr zlibbioc]; }; + NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.10.0"; sha256="06dcssa9cmcj5wgbhi2p30cva8g5n623b1qab5vfxh7vkyz8g6xj"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.38.0"; sha256="0sni1dghasdk9ankfi613fl71iiy3kzr51f9nclvvnc3vz4mg3hk"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NuPoP = derive2 { name="NuPoP"; version="2.0.0"; sha256="1hmqan1c88b0q150w3nlh7l1wgvfxdgdv8m1bxwcn4a9bvjhqsdy"; depends=[]; }; + OCplus = derive2 { name="OCplus"; version="1.66.0"; sha256="06j9caaajvxj21m11pigm3lkd0s0adzaxpbv4v24im7nfvk0cv1g"; depends=[akima multtest]; }; + OLIN = derive2 { name="OLIN"; version="1.70.0"; sha256="090frrifpzygswdk2g11x0klhxb2w6hprlc4qmv3l40fvv7fb5aa"; depends=[limma locfit marray]; }; + OLINgui = derive2 { name="OLINgui"; version="1.66.0"; sha256="14bm1kcbssh4i1kwbd4qdkyspdq7bbar30xcb7a4826fx03j07hv"; depends=[marray OLIN tkWidgets widgetTools]; }; + OMICsPCA = derive2 { name="OMICsPCA"; version="1.10.0"; sha256="1r26pj3rlk211581ddyfga1ghja11x4jy60kdwqzl74gnrjh8nvb"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; + OPWeight = derive2 { name="OPWeight"; version="1.14.0"; sha256="1d3bp3l77335idc3yd9dz1zadby05w46bws835ga7vc824rd08p5"; depends=[MASS qvalue tibble]; }; + ORFhunteR = derive2 { name="ORFhunteR"; version="1.0.0"; sha256="0y4xpzma0lz8qaqr538spwahyis753l6nvdqm4cmynvahkxdqxdj"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg38 data_table Peptides randomForest Rcpp rtracklayer stringr xfun]; }; + ORFik = derive2 { name="ORFik"; version="1.12.11"; sha256="0ylwhk4ahgwqp7l301nyvg73snsc2r72kkxjb3c90pi1cdn4kap3"; depends=[AnnotationDbi BiocGenerics BiocParallel biomartr Biostrings BSgenome cowplot data_table DESeq2 fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra httr IRanges R_utils Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment xml2]; }; + OSAT = derive2 { name="OSAT"; version="1.40.0"; sha256="1carfhb447z696mxb48b99mqr1lh7zr3gkyq7myajbxjym6a51kf"; depends=[]; }; + OTUbase = derive2 { name="OTUbase"; version="1.42.0"; sha256="1yg376iab78blb8qv4d5hq2mb7va4ir3vp8jrl7a8dqcqvgjm8w0"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; + OUTRIDER = derive2 { name="OUTRIDER"; version="1.10.0"; sha256="1vvc2w9c31z67khy85i1r8jjhpbkb0vcxwax2lr84rp314b09021"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment]; }; + OVESEG = derive2 { name="OVESEG"; version="1.8.0"; sha256="0v7279ycirsmv0arqqjb1rn5wxcmxmd35dncxxxsfgn734z4vm8l"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; }; + OmaDB = derive2 { name="OmaDB"; version="2.8.0"; sha256="0h7df541pr46ayc2gvv3c49lhmgksimghid71qw5xxn122zgp8sa"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; + OmicCircos = derive2 { name="OmicCircos"; version="1.30.0"; sha256="1agdy155nk7a4v53whw1fvljsb8gnhvypgjd5w43c41dshhhpc6w"; depends=[GenomicRanges]; }; + OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.8.0"; sha256="1fj7jrczn9rjriw3dbnmsh25bzh7ng9pi8rcdy664xwkm8n840gc"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; }; + Omixer = derive2 { name="Omixer"; version="1.2.3"; sha256="07cadrp5dsm4xx6gnnvxprb3fv9s3yhm7syr8p72yzl01b05b5d0"; depends=[dplyr forcats ggplot2 gridExtra magrittr RColorBrewer readr stringr tibble tidyselect]; }; + OmnipathR = derive2 { name="OmnipathR"; version="3.0.4"; sha256="0rbq3h3cp5dgpy5ifmbnfm6z8w4jv45wjzyl1f4qacgrbyf2l30a"; depends=[checkmate curl digest dplyr httr igraph jsonlite later logger magrittr progress purrr rappdirs readr readxl rlang stringr tibble tidyr tidyselect xml2 yaml]; }; + OncoScore = derive2 { name="OncoScore"; version="1.20.0"; sha256="1765pvqikvckgzajjsa5f0y5fiwyvi3syxafawl765bph83n9f99"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="3.0.0"; sha256="1nsyqs4ai6nrsydi8cw7cxalf7pjzfdafdqx6ga91gyfbj4pv55k"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr stringr]; }; + OpenStats = derive2 { name="OpenStats"; version="1.4.0"; sha256="0yl1bsbjfaghp06zslainr2j0lzzlcm8s173qfw1xmmg6lql9l9i"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; }; + OrderedList = derive2 { name="OrderedList"; version="1.64.0"; sha256="1x0py5fsxwgmzwjwl0xgkkqrly8fkjb44syb7nn6nwpba3hglllv"; depends=[Biobase twilight]; }; + Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.20.0"; sha256="1md15zvr0bli38kb42c319f1b29iwnl5la3zhyim6yab5vrwa1sp"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang RSQLite S4Vectors tibble]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.34.0"; sha256="0p8ccpdchdwci4kv9y07wdadzgms8nipvg6rm1rll35jcflnnkxi"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; + Oscope = derive2 { name="Oscope"; version="1.22.0"; sha256="0h70k69dicimrkxirx0lfnipd9l965ngx2xxswwx1nlgdwbfhhij"; depends=[BiocParallel cluster EBSeq testthat]; }; + PAA = derive2 { name="PAA"; version="1.26.0"; sha256="1cbfwn48c45rrhay94zxyqhf4vcz0z1xcww0fbl6dm90nfvb95d1"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PADOG = derive2 { name="PADOG"; version="1.34.0"; sha256="1wz3vhqc3v4a08bi7f2z82rncpvfagknhsibrpd88nb7h44nzs1k"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; }; + PAIRADISE = derive2 { name="PAIRADISE"; version="1.8.0"; sha256="1l45ir8zgf0xmmbz1bmqlpawz60dq4s9h8c0c4vnzf338vfbvhdy"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; }; + PANR = derive2 { name="PANR"; version="1.38.0"; sha256="05w82fdzqr0p54cmqy0plyav87di4dc2gkwpnvvxz774z69ms03b"; depends=[igraph MASS pvclust RedeR]; }; + PAST = derive2 { name="PAST"; version="1.8.0"; sha256="0qswxk7dwmchc0drd4yk7k1034w2yb79mycpnsp15np7dfffkk41"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; }; + PCAN = derive2 { name="PCAN"; version="1.20.0"; sha256="1yszrk7qcvs9nrk0mqwsjxchpny7xjpq8gh606a41lvf94aznfsr"; depends=[BiocParallel]; }; + PCAtools = derive2 { name="PCAtools"; version="2.4.0"; sha256="11idi9fwvyhkakbm63qxcdhkany8gbskis04z0p5a39lppq8ks31"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; }; + PDATK = derive2 { name="PDATK"; version="1.0.2"; sha256="03dwa6yndshv0wvvvnvn0g84xygx7hs487kcx0gajrsrmlrd8rxq"; depends=[BiocGenerics BiocParallel caret clusterRepro ConsensusClusterPlus CoreGx data_table dplyr genefu ggplot2 ggplotify igraph MatrixGenerics matrixStats MultiAssayExperiment piano plyr pROC RColorBrewer reportROC rlang S4Vectors scales SummarizedExperiment survcomp survival survminer switchBox verification]; }; + PECA = derive2 { name="PECA"; version="1.28.0"; sha256="0sgf934xyyb368x9a0wl17dq3hfcdiz2sk3j0j89a4l56lviaip8"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; + PERFect = derive2 { name="PERFect"; version="1.6.0"; sha256="01jdyl4n50izhr89rvyvp25b11hcm9x3ap2qddbrhk019csp8zax"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; }; + PFP = derive2 { name="PFP"; version="1.0.0"; sha256="120vbhincw2kzcark6i47pnkyzhniv5pr2qq29x3nmap8k9yh121"; depends=[clusterProfiler ggplot2 graph igraph KEGGgraph magrittr plyr tidyr]; }; + PICS = derive2 { name="PICS"; version="2.36.0"; sha256="0w86s998515icvr7xk3dr2kgnsima4lgwh2gi5g6zp5c3g1lmhjp"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; }; + PING = derive2 { name="PING"; version="2.36.0"; sha256="1ncrm9f8xjv7fs6dq81i8zd40d4wlkaah18g2s1x98wpkzrz93hr"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; + PLPE = derive2 { name="PLPE"; version="1.52.0"; sha256="1gwjlrfpav1x5lbhkni6qjinafsf6rdr2c820smld7iqlms404fr"; depends=[Biobase LPE MASS]; }; + POMA = derive2 { name="POMA"; version="1.2.0"; sha256="1qqg1ijivjfyr0bjmjq43m7yngllcla2z0kf4jx08jk8h6jwkhbn"; depends=[broom caret clisymbols ComplexHeatmap crayon dplyr e1071 ggcorrplot ggplot2 ggraph ggrepel glasso glmnet impute knitr limma magrittr mixOmics MSnbase patchwork qpdf randomForest RankProd rmarkdown tibble tidyr vegan]; }; + POWSC = derive2 { name="POWSC"; version="1.0.0"; sha256="043nad76fd97wx4hlspj5i2a18h2ycy1cvxzhg1lnyihnzqbbnd9"; depends=[Biobase ggplot2 limma MAST pheatmap RColorBrewer SingleCellExperiment SummarizedExperiment]; }; + PPInfer = derive2 { name="PPInfer"; version="1.18.0"; sha256="008f1k4z1kp2w82ck21knrgg4jam6s0ff3ia8zzfjcx9cq3gi0f7"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; + PREDA = derive2 { name="PREDA"; version="1.38.0"; sha256="1yv3x68icjyzkxws1k4d0858089anm226vapl5mgi61s4czakl5d"; depends=[annotate Biobase lokern multtest]; }; + PROMISE = derive2 { name="PROMISE"; version="1.44.0"; sha256="06108wmzic9nfl0wk3jkrzvkikmsk3mpahy9563h29868a3ainw4"; depends=[Biobase GSEABase]; }; + PROPER = derive2 { name="PROPER"; version="1.24.0"; sha256="14d7m27plrj2v1w807gx7i0r1m90nj87xz43yvlrlazljg1lriw7"; depends=[edgeR]; }; + PROPS = derive2 { name="PROPS"; version="1.14.0"; sha256="0nmgnb1ckf31avm007qkkhmlirahki6gp7gvlsjygpmf8yc7y8lq"; depends=[Biobase bnlearn reshape2 sva]; }; + PROcess = derive2 { name="PROcess"; version="1.68.0"; sha256="1rcnryml9ab1lbxgs282q1mavs6jj8wqjb97zqc8hnjh02w0g8yd"; depends=[Icens]; }; + PSEA = derive2 { name="PSEA"; version="1.26.0"; sha256="0nz8i0d7z2bdy216dkp0zsyid0r6lssj751sq2h0fk7xvj97ablc"; depends=[Biobase MASS]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.30.0"; sha256="1gsh4sjs5k1kzwnywc3vxagvgwb6qzadgrcj4xszdd7pk06vd8dj"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PWMEnrich = derive2 { name="PWMEnrich"; version="4.28.1"; sha256="137yxm3i0kpl05lldp8d57vmhyj664pxc2cimdqdy4v5n8asw764"; depends=[BiocGenerics Biostrings evd gdata S4Vectors seqLogo]; }; + PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.20.0"; sha256="02gqy5d4m23ac8djy6ximbk383721470finyw8gc8ndjb7ppq73i"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; + Path2PPI = derive2 { name="Path2PPI"; version="1.22.0"; sha256="1klxm9y73amcan6lr2vhjg5iia3jqai2vb9kg43rl4b7yd746wlg"; depends=[igraph]; }; + PathNet = derive2 { name="PathNet"; version="1.32.0"; sha256="05qqcpr51bc8hz4073760pwm1742mfixm2dlpk56xa0b589l7clc"; depends=[]; }; + PathoStat = derive2 { name="PathoStat"; version="1.18.0"; sha256="1zg3vwnxnsm0fmhiskg7zmfmfs100n56g1cv6lrz2dgf3860119c"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; + PeacoQC = derive2 { name="PeacoQC"; version="1.2.0"; sha256="0l065ij2fh6qqhlfpr6cqv9pqlrjamppfrv7gbdkj5z1sh75np6b"; depends=[circlize ComplexHeatmap flowCore flowWorkspace ggplot2 gridExtra plyr]; }; + PepsNMR = derive2 { name="PepsNMR"; version="1.10.1"; sha256="0amx3fdxn1b1n3j37hgj9lpnxffvk6mlqn9k9kjhf1qsbhafx2m7"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; }; + PhIPData = derive2 { name="PhIPData"; version="1.0.0"; sha256="0ly3wqqiiizsfdcsb5jcd1pzh9b5mb5241qq7rz3pqrsgncxrax9"; depends=[BiocGenerics cli edgeR GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="2.4.0"; sha256="1krvfadlzari9icyqr1y8zjhf9wpa0a6pavqjfwz3i7878wj35g7"; depends=[Biobase BiocGenerics BiocParallel caTools CoreGx data_table downloader ggplot2 glue jsonlite magicaxis MultiAssayExperiment RColorBrewer reshape2 S4Vectors SummarizedExperiment]; }; + PhenStat = derive2 { name="PhenStat"; version="2.28.0"; sha256="056w1n6q0j0w7lnny4s87picxcbx2wzbpdmq88crgbg4z4mpfl2p"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; + PhenoGeneRanker = derive2 { name="PhenoGeneRanker"; version="1.0.0"; sha256="01zxscbmb4cj576avzkc7s7kmsr9f9m3wx7hp32bns8d5jlsaxji"; depends=[doParallel dplyr foreach igraph Matrix]; }; + PhosR = derive2 { name="PhosR"; version="1.2.0"; sha256="1fravmg690is1lqp2afzg22ywycx0p2sqp6hw97s51phyw5f82vn"; depends=[BiocGenerics circlize dendextend dplyr e1071 GGally ggdendro ggplot2 ggpubr ggtext igraph limma network pcaMethods pheatmap preprocessCore RColorBrewer reshape2 rlang ruv S4Vectors SummarizedExperiment tidyr]; }; + PhyloProfile = derive2 { name="PhyloProfile"; version="1.6.6"; sha256="0jabsrjzlgw38mm0qmwfa7zygpl9fir3gyn0r75dyvrbz7z3psc2"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer RCurl shiny shinyBS shinyjs xml2 zoo]; }; + Pi = derive2 { name="Pi"; version="2.4.0"; sha256="1k0i2jw216k6vbjda4d500whzhdagssci1030ywh5d9fg6z9zm37"; depends=[BiocGenerics caret dnet dplyr GenomeInfoDb GenomicRanges ggnetwork ggplot2 ggrepel glmnet igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; }; + Pigengene = derive2 { name="Pigengene"; version="1.18.0"; sha256="173x4kwgg7f11c4s6jq1rcwcml4b5kcd3wvxxczzdbd58h4ayb4j"; depends=[BiocStyle bnlearn C50 dplyr gdata GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + PloGO2 = derive2 { name="PloGO2"; version="1.4.0"; sha256="13ilmsy24j3p9f3addz1i9fwscra47rgq4j7ndz46d1h2rd3rdvy"; depends=[GO_db GOstats httr lattice openxlsx xtable]; }; + PoDCall = derive2 { name="PoDCall"; version="1.0.0"; sha256="1sblbxwpqvznm51addm0rrbzimybqb9amawg53v94802cmk5c6jd"; depends=[diptest DT ggplot2 gridExtra LaplacesDemon mclust purrr readr rlist shiny shinyjs]; }; + PoTRA = derive2 { name="PoTRA"; version="1.8.2"; sha256="1wxirc82xn634xzp3z9h4g3hnn6l8x81ayvhhrwplja2fc5kbh7a"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; }; + PrInCE = derive2 { name="PrInCE"; version="1.8.0"; sha256="13lfs9afsxafakx8p0vikqrna478c5wxsc7k97xjjafyf2x6msx1"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; }; + PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.8.0"; sha256="1s6ynsnk2y671k522ffsg2qy4rc62jax7krdd465iasj3wsz4h11"; depends=[BiocParallel biomaRt brglm cgdsr data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; }; + Prostar = derive2 { name="Prostar"; version="1.24.8"; sha256="0ixan77d9spvi5s6sy3lf0rpsl0v8j8rn16mcm7r35c26sy3yd2j"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets tibble webshot XML]; }; + ProtGenerics = derive2 { name="ProtGenerics"; version="1.24.0"; sha256="1c79k8nc28782w5gxi7pkm8jmddq1hdw6khs9kgsp8dyk60ak6fq"; depends=[]; }; + ProteoMM = derive2 { name="ProteoMM"; version="1.10.0"; sha256="009gqr9nr8blx8lcaypwqjcvg1p1r03mbmb7dy4jzgk63gzix881"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.22.0"; sha256="1lfxrivdqiq6q95g4l7sly1qrlsykafcv7nsr8y8bxmw3xj1v3jv"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PubScore = derive2 { name="PubScore"; version="1.4.0"; sha256="0cgghhkvk6jngvflsvqzwy2ri34y26cazppsps13zbd4hjv1x223"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; }; + PureCN = derive2 { name="PureCN"; version="1.22.2"; sha256="0bmp2j1p10hvx9gkq8wyxha006d793499g53g662yj8skb7cgz2v"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; + Pviz = derive2 { name="Pviz"; version="1.26.0"; sha256="04r9ybr3qw1pa6jh36jvxjydbf96i2ff9x9nzwwvzinz9wzcf9ic"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; + QDNAseq = derive2 { name="QDNAseq"; version="1.28.0"; sha256="1p4544xlarkbgs9kybrrawq3v7qr6ix62nrc6l7dcksh2ka69yzf"; depends=[Biobase CGHbase CGHcall DNAcopy future future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QFeatures = derive2 { name="QFeatures"; version="1.2.0"; sha256="198drsqhlkmzxlqg1n3nirqn5m83vb99ygi36whkaxdgjwzgp3gn"; depends=[AnnotationFilter Biobase BiocGenerics IRanges lazyeval MsCoreUtils MultiAssayExperiment ProtGenerics S4Vectors SummarizedExperiment]; }; + QSutils = derive2 { name="QSutils"; version="1.10.0"; sha256="01mn21gaprdgsl6m3n96p2f2n069p0dzfyf8bqc46dkq6r0qr1br"; depends=[ape BiocGenerics Biostrings psych]; }; + QUBIC = derive2 { name="QUBIC"; version="1.20.1"; sha256="113rhjcr8f3yqfcii013n23d6m9wjr3gajcn304n5mv9h4qikb8p"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + Qtlizer = derive2 { name="Qtlizer"; version="1.6.0"; sha256="196bq4vscpi9hzpplg0wdzb421s56zlw1b30fcjm71v1krpcri0k"; depends=[curl GenomicRanges httr stringi]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.24.0"; sha256="1d21cdmy594k6bznlrgfy4ykaxvjamp7nmsphdv1k4ga36qbwncz"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.32.0"; sha256="1635ff11ahzjrh3cdcxrq5bgd100n444k7mc0maz0jx21vj8qqb1"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.26.0"; sha256="1pj58n86niqsjxcfyc10gc6w72a9i9lah3ry8427w2r1n3846qi8"; depends=[dplyr Rcpp yaml]; }; + R3CPET = derive2 { name="R3CPET"; version="1.24.0"; sha256="1b08k07iypsik6rr1lcp3hhmxghiwbghh08jrhnwhn9z1hpm6j0z"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.42.0"; sha256="0rnh6bnfmc83v8fx0wdc5zppj8nbr1j773i8w33kcrd7q8gdwwvg"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; + R4RNA = derive2 { name="R4RNA"; version="1.20.0"; sha256="1ablfqmppwm2ixivmchfwgii7073fs9wv9k1rjj6h1xyim4assiy"; depends=[Biostrings]; }; + RBGL = derive2 { name="RBGL"; version="1.68.0"; sha256="0l40ibf8g5s4ay83s92l198jjqc5l09hcmxqcjrpifvp5pjf9yy5"; depends=[BH graph]; }; + RBM = derive2 { name="RBM"; version="1.24.0"; sha256="15ybv04kn0d8w61sdbahk1j0vn9m567xwjs2kisiw0by82idgmn0"; depends=[limma marray]; }; + RBioinf = derive2 { name="RBioinf"; version="1.52.0"; sha256="1jckqnmhpyj5idlyynxxhz51fp84ahx7rxvh1mzpdnian6myr6g1"; depends=[graph]; }; + RCAS = derive2 { name="RCAS"; version="1.18.0"; sha256="0l92v870ndna8zjqwzf22fb9vyhkh6942v4gaiqr1yc4qr521p5p"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors]; }; + RCASPAR = derive2 { name="RCASPAR"; version="1.38.0"; sha256="08qg3rjxwkfznwr22rhixxz4b2l910fp5gykq1v11j3nipjjnnbk"; depends=[]; }; + RCM = derive2 { name="RCM"; version="1.8.0"; sha256="0cpqc6jqy1vb4bgj6j7dsglj2qm1bfk2hx0dbkpmcq61y9xy4pb0"; depends=[alabama edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries VGAM]; }; + RCSL = derive2 { name="RCSL"; version="1.0.0"; sha256="0bjn0yx2g70k6v1lhsaj7r3acljdr9jyf0x33irdmw23lpsrqgff"; depends=[ggplot2 igraph NbClust pracma RcppAnnoy Rtsne umap]; }; + RCy3 = derive2 { name="RCy3"; version="2.12.4"; sha256="1k5r9vi5gh6bhpcykd7x6kmnvixkx6r2fxn6h5w65snb2dnd1p9w"; depends=[base64enc base64url BiocGenerics dplR glue graph httr igraph IRkernel R_utils RColorBrewer RCurl RJSONIO uchardet XML]; }; + RCyjs = derive2 { name="RCyjs"; version="2.14.0"; sha256="1bni672lz8ijflslf9v9cps635iiiz5qfkq3lyw1kg90k6wh7691"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; + RDRToolbox = derive2 { name="RDRToolbox"; version="1.42.0"; sha256="14rrp3dlnvk4sn024vab5cwf5nzqrcbyabg7yc6al2769f6rlpdv"; depends=[MASS rgl]; }; + REBET = derive2 { name="REBET"; version="1.10.0"; sha256="121n2fian9wvc45zfm5k8kj05h6w4mrmpb77sm0hl24nwgr94l0q"; depends=[ASSET]; }; + REDseq = derive2 { name="REDseq"; version="1.38.0"; sha256="14d832py7ky0rwzi5ydpivyyy4k670v5yn3inhgj1qr8k9amdymr"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; + REMP = derive2 { name="REMP"; version="1.16.0"; sha256="1zj8fvk5gb27rss1kbk7hc7chz9hwcpkp88d9a4l98qi77fi0aan"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; }; + RGMQL = derive2 { name="RGMQL"; version="1.12.4"; sha256="03c9ws9g44hcr1171xah6cyb987mlmv3qwkyryi53ahxyqik48lv"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; + RGSEA = derive2 { name="RGSEA"; version="1.26.0"; sha256="09g4jg9gcjl8ynhbcj3hw3v96f1vkid9w5yb45h60q7s5fsdqr08"; depends=[BiocGenerics]; }; + RGalaxy = derive2 { name="RGalaxy"; version="1.36.0"; sha256="124zzyarkdb2bragf5z0514xl0awk0j63db6c2jxw67sbzdvksp3"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; + RGraph2js = derive2 { name="RGraph2js"; version="1.20.0"; sha256="1h0jbzc6ch9pp0d24779dsimwy2qh24widkl038jbrz85pja331q"; depends=[digest graph rjson whisker]; }; + RIPAT = derive2 { name="RIPAT"; version="1.2.0"; sha256="11w04m99mr60wkv7rmlsyr5yvwnkklpzqcfg0pv9gg4a7rpcjqx9"; depends=[biomaRt GenomicRanges ggplot2 IRanges karyoploteR openxlsx plyr regioneR rtracklayer stringr]; }; + RITAN = derive2 { name="RITAN"; version="1.16.0"; sha256="030wpc4afvfdlryylxyrlv1d44hsrzrnx9v49dhs4rygq284522z"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; + RIVER = derive2 { name="RIVER"; version="1.16.0"; sha256="1y92wrch7012ycv12kranc7znchgxydl4rpchkaazvhqwk13297j"; depends=[Biobase ggplot2 glmnet pROC]; }; + RImmPort = derive2 { name="RImmPort"; version="1.20.0"; sha256="0b8arhs6h7jfcp4sdwskvabniarlbsjwjqkrrwppa8w28k3vax41"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.16.0"; sha256="0zpgfbr4i03gy7hnzgjp2i2nv0lq94a7dx4jlyk0idhf0rnk2jz7"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + RLMM = derive2 { name="RLMM"; version="1.54.0"; sha256="0q184j0fpx0sp9zi71j6j9k3ycc1r6df46qi3wbnlb1m8aqzvyj9"; depends=[MASS]; }; + RLassoCox = derive2 { name="RLassoCox"; version="1.0.0"; sha256="105dap39j4r1xqy1kwhc2b8ifcml26rhrz5h97596wpav9ynmwxx"; depends=[glmnet igraph Matrix survival]; }; + RMassBank = derive2 { name="RMassBank"; version="3.2.0"; sha256="0mgr15b7kx5i2ia33g8r62pfw03d33g7qz4r40dkhpgr3sbvyv67"; depends=[assertthat Biobase digest enviPat httr MSnbase mzR rcdk Rcpp rjson S4Vectors XML yaml]; }; + RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.4.0"; sha256="150dslxydc9vnyfvhnxqq441v54ml236vi67mj06xysfg8zil1kd"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; }; + RNASeqPower = derive2 { name="RNASeqPower"; version="1.32.0"; sha256="17kxz7jrsip837q4fxwcnd85ak7l05mvl16m02zbimi95pbwvm0a"; depends=[]; }; + RNASeqR = derive2 { name="RNASeqR"; version="1.10.0"; sha256="0md7p08h2d15gf9kk9yz0zc46ya6z5d9bw2dpmaqnxvx42xlc5xp"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; + RNAdecay = derive2 { name="RNAdecay"; version="1.12.0"; sha256="0aqja2q2xfszxfabvi0nby6k383xxvfcdfh4x0y7x3i3wcrzh70r"; depends=[ggplot2 gplots nloptr scales TMB]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.40.0"; sha256="0r1ciy7gszwd1nw3s1mvwsml26vymkzzk17bg59vi0fiqh0dblfr"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNAmodR = derive2 { name="RNAmodR"; version="1.6.0"; sha256="1vdrqhr6lii3gcbgqclhnrqqzzzpdm42psr6swdk536k0a1ax4zk"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors]; }; + RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.6.0"; sha256="0mqk2zqnzbj0l563jsmq76lbvk1662m142zz31514x30bxz6z9nn"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.6.0"; sha256="10c3hzy6yxr23hgaidn3qslv7fgzfvq7wacw9ax97c3hi5n9gnbx"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; }; + RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.6.0"; sha256="15k29lp8qzx9n7q9xpacwza9zrdljicagi24v9r6s1vdrfgbq1rf"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; }; + RNAsense = derive2 { name="RNAsense"; version="1.6.0"; sha256="0470g4d2sp9qbzcqsk5w5z0wsqmd7cgdpwksvl8rwy6kdizlblms"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; }; + ROC = derive2 { name="ROC"; version="1.68.1"; sha256="1rmsrvn6hrg9ay7xfb05mfkxknnig78p3kbk9ghsd11lhx2fjm3s"; depends=[knitr]; }; + ROCpAI = derive2 { name="ROCpAI"; version="1.4.0"; sha256="1634c5vwjiflcs0djnml3l0p45fi8rwigm5p81nad7cql21vvawc"; depends=[boot fission knitr SummarizedExperiment]; }; + ROSeq = derive2 { name="ROSeq"; version="1.4.0"; sha256="1vdy26rs25hvym3y7dvyd9ld4zc91zqwky60461acy58g8nmh0wd"; depends=[edgeR limma pbmcapply]; }; + ROTS = derive2 { name="ROTS"; version="1.20.0"; sha256="18wyi73l95df182vg3m014sxwdbpggr61vsbazhyw4vyx2fnzmpl"; depends=[Biobase Rcpp]; }; + ROntoTools = derive2 { name="ROntoTools"; version="2.20.0"; sha256="03anqp8mbcnjhf6sg5jkc31mdxwifvhbqh8hvkj3xzmyvfbf6vz3"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; + RPA = derive2 { name="RPA"; version="1.48.0"; sha256="0hdnaqv1iivq365nnbcw1hsampql8icldnrar725jbivpqsv1bj4"; depends=[affy BiocGenerics phyloseq]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.4.0"; sha256="1hyds97ay4mn7nl830yh9v8mlasgsljsx5wsrhz2zsmbbyx6wbnb"; depends=[]; }; + RRHO = derive2 { name="RRHO"; version="1.32.0"; sha256="1bim6db375jb8ibf4ccqdjh5kir0av77qwvn3jxp7l14hpbmv3c8"; depends=[VennDiagram]; }; + RSVSim = derive2 { name="RSVSim"; version="1.32.0"; sha256="1kasdg8z3yr9n89rd9bcycnv43yg5b46nflksgciif6xd4shmcrb"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; + RSeqAn = derive2 { name="RSeqAn"; version="1.12.0"; sha256="10z541vymjqfddi5bhiws44smvrqcxqn5ns7s4rqif3h2n4n1chx"; depends=[Rcpp]; }; + RTCA = derive2 { name="RTCA"; version="1.44.0"; sha256="1ivsz36zw89yjrs34bk5wk8nag2ckaxahrvplh56kw6948vq0d9k"; depends=[Biobase gtools RColorBrewer]; }; + RTCGA = derive2 { name="RTCGA"; version="1.22.0"; sha256="0rw6d1lcsaf7ia492qyj024sdi9qw3hn7pa44f9vw21npbr4jsaf"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.22.1"; sha256="0lggavnzq9ypz0ka1a3qwfw9d8jm5g2bw9njg56ag95daklb1zdv"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; + RTN = derive2 { name="RTN"; version="2.16.0"; sha256="1p7qwhs1rk0s3am67h9akm4p19sqm9ndjr5jp1zc434wqm7ihfdm"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; }; + RTNduals = derive2 { name="RTNduals"; version="1.16.0"; sha256="01jzqfzqfj49yl8ylikgcpg6pw2r8s69bmyxgx8bmw2mh4vwyvww"; depends=[RTN]; }; + RTNsurvival = derive2 { name="RTNsurvival"; version="1.16.0"; sha256="16jjik6si86p8c8q11fvq0h6swflbslayify3cydj6g37mwlnri6"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; }; + RTopper = derive2 { name="RTopper"; version="1.38.0"; sha256="1jizdgcni1zm4akvl50s76szk0701b3z1ry78sjj8501jc806bcy"; depends=[Biobase limma multtest]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.26.0"; sha256="1fy0k1p0m209lzjpd5jhfnifa22lrn63qq3a3kn5g0xhbbmijzac"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVcorr = derive2 { name="RUVcorr"; version="1.24.0"; sha256="1dr0kczj3lvv193yh0vp2hqv0b846g9kq0qhr054k58yfp3dplip"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; + RUVnormalize = derive2 { name="RUVnormalize"; version="1.26.0"; sha256="0gajn59j0i11j5gxa5nd4srq8ki2355j0xk1x8k15cr7sdrrd12l"; depends=[Biobase RUVnormalizeData]; }; + RVS = derive2 { name="RVS"; version="1.14.0"; sha256="1690agl8jx5fc7x1n9ffiszsbg2nlz0m9gh400hdkrw74dhv9l5l"; depends=[GENLIB gRain kinship2 snpStats]; }; + RadioGx = derive2 { name="RadioGx"; version="1.2.0"; sha256="1vv76lhsrk037pgvnb2a1817lh58vnbcl4ka6zrxmaailjb8khs1"; depends=[assertthat Biobase BiocParallel caTools CoreGx downloader magicaxis matrixStats RColorBrewer reshape2 S4Vectors scales SummarizedExperiment]; }; + RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.16.0"; sha256="0k8hnyx7yvn9cnmv9fp66a5ph1yv8a732dk3yaxwp8gdlz1mps6n"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors SummarizedExperiment]; }; + RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.12.0"; sha256="01gssx570rdsfncyb23v9fgq3yqsicw8mak7jpx8n1scjpszqdmp"; depends=[dnet igraph Matrix]; }; + RankProd = derive2 { name="RankProd"; version="3.18.0"; sha256="0wgs5b2a8i5bcj9vr4pcqzm52rkh453kr736i0qww1si7drj2s1r"; depends=[gmp Rmpfr]; }; + RareVariantVis = derive2 { name="RareVariantVis"; version="2.20.0"; sha256="1v0mpjwgqxgqa90x9h5lfmpllfch1fzqim360h6l3a2ycnvnvpyj"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + RbcBook1 = derive2 { name="RbcBook1"; version="1.60.0"; sha256="1f6pss18l0l4m43f3nfx21nnyr8h6wi1f4wv4197hjdhi4wzs2la"; depends=[Biobase graph rpart]; }; + Rbec = derive2 { name="Rbec"; version="1.0.0"; sha256="08990zfzkz4awi0ysc9gvp8pbc6pbc9bidgfidjqm574fqgm968v"; depends=[dada2 doParallel foreach ggplot2 Rcpp readr]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.32.0"; sha256="0mfikbrs28q7r3lnsq0jma5x6nkrnm3q46242jh35w9c969jk5yy"; depends=[]; }; + Rbowtie2 = derive2 { name="Rbowtie2"; version="1.14.0"; sha256="0r5yqjal48xlcv5cidi7p3zwygvsllmv2zzkwkc9kfq083l2i4ih"; depends=[]; }; + Rcade = derive2 { name="Rcade"; version="1.34.0"; sha256="0llg1v8y1waw4mg62k6sgg0q5yckf4f0spyrzlf2l69vm685ksfl"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; + RcisTarget = derive2 { name="RcisTarget"; version="1.12.0"; sha256="1yh0l11vnslgr6zsbpgc8mc4aa32zy34f5yrz98hkcdl53iw5y7f"; depends=[arrow AUCell BiocGenerics data_table dplyr feather GenomeInfoDb GenomicRanges GSEABase R_utils SummarizedExperiment tibble]; }; + Rcpi = derive2 { name="Rcpi"; version="1.28.0"; sha256="0c5b30w9kam86848iqffz7kv50qxacpljcwsf7slj9yrnyrh0jxq"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + Rcwl = derive2 { name="Rcwl"; version="1.8.1"; sha256="185lra9lrvw5yhvda68gcsk7j3rhdillxjx7gy5v9a9g2hmbh3sv"; depends=[basilisk batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; }; + RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.8.0"; sha256="1lx0d5k3bdvxmb06lcqfzasz623nc3jagkfx2kq2s0x7ld50rafa"; depends=[BiocFileCache git2r httr rappdirs Rcwl S4Vectors]; }; + Rdisop = derive2 { name="Rdisop"; version="1.52.0"; sha256="0v3pq5hpgfprchjjnn6xqbgy49bw4dfhhs0ni78savhxk1k7m7ic"; depends=[Rcpp]; }; + ReQON = derive2 { name="ReQON"; version="1.38.0"; sha256="1z13avbxwvvhh03arjfnaipznynifsi8k2hzw4kappz24f7lwmza"; depends=[rJava Rsamtools seqbias]; }; + ReactomeContentService4R = derive2 { name="ReactomeContentService4R"; version="1.0.0"; sha256="1n27g9bkjhqik66v7y28yrqxm2ccjw92r9afp64n7ph6qk6qkjq6"; depends=[data_table doParallel foreach httr jsonlite magick]; }; + ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.6.1"; sha256="0gbc86vpvcx9jrpnrwapm1n38f8w8a309qdq78kghl45az8shfd8"; depends=[ggplot2 gplots httr jsonlite progress RColorBrewer]; }; + ReactomeGraph4R = derive2 { name="ReactomeGraph4R"; version="1.0.0"; sha256="19vgz9kxnvf959hpxwmgv0s6g52qg7aa4glsn40s17mrsbmprgvg"; depends=[data_table doParallel foreach getPass jsonlite magrittr neo4r purrr ReactomeContentService4R rlang]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.36.0"; sha256="1293z89ai766c559axgr7mz5x4564gyl9xqzf6s8s0aj1xb35gqf"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.38.0"; sha256="0a5paks4q210h3261p59mc19pbwq3znkn7mirsvcpv9y6ha7jfzj"; depends=[Biobase]; }; + RedeR = derive2 { name="RedeR"; version="1.40.4"; sha256="1cyn76dhmnkca03bfk0w2hj8jly6kz8iwg9qi7kwgqs6rcamh4sn"; depends=[igraph]; }; + RefPlus = derive2 { name="RefPlus"; version="1.62.0"; sha256="0j9xia747rhbxz7vx20cvb3bsqpz6y4q1mh7m9nas0x3dfrzcci9"; depends=[affy affyPLM Biobase preprocessCore]; }; + RegEnrich = derive2 { name="RegEnrich"; version="1.2.0"; sha256="1n6sgvbmbknp20i732w5xv2a882ri1xli7h3n4wcsl95614aszl5"; depends=[BiocParallel BiocSet DESeq2 DOSE dplyr fgsea ggplot2 limma magrittr randomForest reshape2 S4Vectors SummarizedExperiment tibble WGCNA]; }; + RepViz = derive2 { name="RepViz"; version="1.8.0"; sha256="0jpa9h59q1rjqxx4g6gsk4v33zf9k2xb1cggp4hpgyy7n9cqph0h"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; }; + Repitools = derive2 { name="Repitools"; version="1.38.0"; sha256="0l3aqchy0d680jpaz6nws2k3byh2pxqxnb94gvax3703pm73jr3l"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; + ReportingTools = derive2 { name="ReportingTools"; version="2.32.1"; sha256="0wq9y649dh1am6djzz0xlz42428xsgw2bdx1dknhdw2xbydmmx47"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; + ResidualMatrix = derive2 { name="ResidualMatrix"; version="1.2.0"; sha256="0p7va19aw0j6anx7ck879kbi5cn7dy712h5ia94adr38ssismv1v"; depends=[DelayedArray Matrix S4Vectors]; }; + Rfastp = derive2 { name="Rfastp"; version="1.2.0"; sha256="1hq6wpxfildizr4wjlyfdsjr65394yvsv7a31iwwhj0icbhcdbfw"; depends=[ggplot2 Rcpp reshape2 Rhtslib rjson zlibbioc]; }; + Rgin = derive2 { name="Rgin"; version="1.12.0"; sha256="1bx47nk84h2yh1npijl7agp36ky8ad4fcdk8w5j49z4x2mj1pzb0"; depends=[RcppEigen]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.36.0"; sha256="0d0xq1vgr4b165cn4wg7zmfjyc1d9ir4amgs196j4cgrhpmrnl8s"; depends=[graph]; }; + Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.14.2"; sha256="1cwynbcaaxmbh45fc0d264liqdj0wbjlj7k2bsq3qfjbnh6kkam5"; depends=[]; }; + Rhisat2 = derive2 { name="Rhisat2"; version="1.8.0"; sha256="1hqahh5h22mj2crqp6r9xnm111xmfgk39c100rcaziqrpdy5npk8"; depends=[GenomicFeatures GenomicRanges SGSeq]; }; + Rhtslib = derive2 { name="Rhtslib"; version="1.24.0"; sha256="0acpgv98529ic2i2k03knz05akb6h51wbz7sr5zgi8gk4nmawrlf"; depends=[zlibbioc]; }; + RiboDiPA = derive2 { name="RiboDiPA"; version="1.0.0"; sha256="1zxav8j5ja6dswlhq70pyjqy3xsd5ra2n4sksi2m97xdydy0iq5q"; depends=[BiocFileCache data_table DESeq2 doParallel elitism foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges matrixStats qvalue Rcpp reldist Rsamtools S4Vectors]; }; + RiboProfiling = derive2 { name="RiboProfiling"; version="1.22.0"; sha256="1jmd8yrv7p7hn4gdibg3svmhqxjyrnfp7cgsqg8zv862lgd75zsl"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; + Ringo = derive2 { name="Ringo"; version="1.56.0"; sha256="1ysivh14xxfs51mdq4sdddhfdas96cdqhsj9bzy10ys9myxf3q2x"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Risa = derive2 { name="Risa"; version="1.34.0"; sha256="17122fhcb40ib3i2yg6rpjz9qy893nsdmm10gdm86ivlnmf53ng7"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Rmagpie = derive2 { name="Rmagpie"; version="1.48.0"; sha256="14fgyhfivr4biy5hf3jz1fnq25m6qgvv68lmlzqs8099d2z0jx6i"; depends=[Biobase e1071 kernlab pamr]; }; + RmiR = derive2 { name="RmiR"; version="1.48.0"; sha256="128f8zddhfzq1wljvrinlnyy0phxygg2v3razb2fflm0fdn1gx2x"; depends=[DBI RmiR_Hs_miRNA]; }; + Rmmquant = derive2 { name="Rmmquant"; version="1.10.0"; sha256="13lxqgrrk8cdbrxlj4hbvvw6vx2y0d9yb4w8qnihmwlckzf7ra3b"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + RnBeads = derive2 { name="RnBeads"; version="2.10.0"; sha256="07x41v0zs6fsayc8y2xvw3zyj97lqnhn18a58wjc045qiqbjc3ah"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; + RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="2.2.0"; sha256="0593nz2brigsamj3wi6wbqi424d7awl9pgdna8n9srwpz44j30l9"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; + Rnits = derive2 { name="Rnits"; version="1.26.0"; sha256="15svapaz8nvbip34n9q4ywh21vpzhxpy8shjbjxgiyz9bf1mpfsp"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; + RpsiXML = derive2 { name="RpsiXML"; version="2.34.0"; sha256="12qaa6inbqgabyi3whm0jqvyhb5kbdyh6k8rc2y0irpiv7j85i8f"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; + Rqc = derive2 { name="Rqc"; version="1.26.0"; sha256="02hwj2vd003x0zf273ndnwh7kxy6wc3sz14d3kryp2w2aqjj826f"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="2.8.0"; sha256="0arhh5bbx3pmxmkh5sjgczcswqy83d35r7cjhd2knpczdvrixaq5"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="2.6.4"; sha256="043m4512q73x6q529hqfgrap0fq5anvny4va085nafia06b805pi"; depends=[Matrix]; }; + Rtpca = derive2 { name="Rtpca"; version="1.2.0"; sha256="0z8q7iyk3f38sn928fan96lwy2xkhx5bzhq184sbn8v3hadhhxyd"; depends=[Biobase dplyr fdrtool ggplot2 pROC tibble tidyr]; }; + Rtreemix = derive2 { name="Rtreemix"; version="1.54.0"; sha256="0rkvkdwyivlvx32azmfwfv1pg1c879mil3h9wz7pwlmxg5ick3yi"; depends=[Biobase graph Hmisc]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.30.0"; sha256="0v5vxmg0a27ivgymmzfl595rcb1m3dz27r2wzbk1j97rlpwy1p4q"; depends=[BiocGenerics]; }; + SAIGEgds = derive2 { name="SAIGEgds"; version="1.6.0"; sha256="0liacxqmalsmg4siafvbas177n6q53rzf2j9hhxv25gp97kld85s"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; }; + SANTA = derive2 { name="SANTA"; version="2.28.0"; sha256="0nncii7zwgrw8l4njiw63x3ml6qfm53sa29ldrlipaynmv1cwdzh"; depends=[igraph Matrix]; }; + SBGNview = derive2 { name="SBGNview"; version="1.6.0"; sha256="0b44b5ll7ydq6a15543glcwpw4kyvrbfjzwh99v0s8mnpxjfqrfn"; depends=[AnnotationDbi bookdown httr igraph KEGGREST knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; }; + SBMLR = derive2 { name="SBMLR"; version="1.88.0"; sha256="0sd3ck7milkxdaz3ng4kra70xch5b8db444na3r92m8c1kxbwh28"; depends=[deSolve XML]; }; + SC3 = derive2 { name="SC3"; version="1.20.0"; sha256="0cix5yym8jr6izb14c0lysj8n5015nl94sqlzsqqfdhg0011lhlw"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; + SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.34.0"; sha256="1aqm2dwh3dri1mz6h8j033z2bpng5raffj6q58xviwivsmy26kgd"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; + SCANVIS = derive2 { name="SCANVIS"; version="1.6.0"; sha256="1mi9hh5h3wwy1rnj515rzcr0wnh4p4ndg6lc0x94zvvl2agkganq"; depends=[IRanges plotrix RCurl rtracklayer]; }; + SCATE = derive2 { name="SCATE"; version="1.2.0"; sha256="17jlk8r7rh095ikghqj8kp46wr9wkjj9bkc09jgpifyg59kwx1n8"; depends=[GenomicAlignments GenomicRanges mclust preprocessCore Rtsne SCATEData splines2 xgboost]; }; + SCArray = derive2 { name="SCArray"; version="1.0.0"; sha256="1i75c3wr48qxfpmma1ixanykvq625y28pjs8pm29qcl8is3nix92"; depends=[BiocGenerics DelayedArray gdsfmt IRanges S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SCBN = derive2 { name="SCBN"; version="1.10.0"; sha256="1iajwwkjdgcixvpjppbfz7k0v4929f7ihjx6vic6k96w3r5fvvkk"; depends=[]; }; + SCFA = derive2 { name="SCFA"; version="1.2.0"; sha256="13rpp8iw9rrq15w937dvx0z9xd2f68snrjnjya0rkdjgjlk51970"; depends=[BiocParallel cluster clusterCrit glmnet igraph keras Matrix matrixStats psych RhpcBLASctl survival tensorflow]; }; + SCOPE = derive2 { name="SCOPE"; version="1.4.0"; sha256="026cjqmn5d12a54d3nxvpjbyg1wl8msn7fh3nkyb7gcaniyxnkx2"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; }; + SCnorm = derive2 { name="SCnorm"; version="1.14.0"; sha256="0mm9yikr0aj4k8dm6iiqs32rpj5vpyx9bsphsw7fvq16rc7fizjl"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SDAMS = derive2 { name="SDAMS"; version="1.12.0"; sha256="13ppvb73yaplcckigwvqc1whw8dr16gakp415iqif0n1ry2pg8a7"; depends=[qvalue SummarizedExperiment trust]; }; + SELEX = derive2 { name="SELEX"; version="1.24.0"; sha256="06h5vrjb98l6fj8v09jrfskm0734lzx7zc1v38640vdrrz2857vp"; depends=[Biostrings rJava]; }; + SEPIRA = derive2 { name="SEPIRA"; version="1.12.0"; sha256="08f2wgfrn2r5xxz85c9jjchyy923fa82mdb4l4rmmvl08qvfv0xl"; depends=[corpcor limma]; }; + SEtools = derive2 { name="SEtools"; version="1.6.0"; sha256="17ykywi368fmsncsjcmgz3g75wgp2s50vk5gvxsciypsmffvnicc"; depends=[BiocParallel circlize ComplexHeatmap data_table DESeq2 edgeR Matrix openxlsx randomcoloR S4Vectors seriation SummarizedExperiment sva]; }; + SGSeq = derive2 { name="SGSeq"; version="1.26.0"; sha256="0i1yaw8h8gibakvaf1xd6nnjx2bsb2s9c0q74rbq9lm7haihivp6"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; + SIAMCAT = derive2 { name="SIAMCAT"; version="1.12.0"; sha256="1dn3kp30052vf7r1bf4k4bz29vj6l47jryiznpam30vfzhj7z4i0"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo LiblineaR matrixStats mlr ParamHelpers phyloseq pROC progress PRROC RColorBrewer scales stringr]; }; + SICtools = derive2 { name="SICtools"; version="1.22.0"; sha256="0hcwpdl9h46k72yppz6gbsyj5q52bpfqv8xmz9f7sddpw0r3zwk5"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; + SIM = derive2 { name="SIM"; version="1.62.0"; sha256="01blkbvv1j7fvrxc1dv4b4gg24rmd7qaqdqvai5zzwawgl6lx9rn"; depends=[globaltest quantreg quantsmooth]; }; + SIMAT = derive2 { name="SIMAT"; version="1.24.0"; sha256="0nlszv5k39f09z9jqm935xc9w6crd2wcvz2b4a26rm23872gxhwr"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SIMD = derive2 { name="SIMD"; version="1.10.0"; sha256="1y27cz440g19wkmg7vgbdgfxh2hpm9mfibwc41iggp1bmlbpi9i1"; depends=[edgeR methylMnM statmod]; }; + SIMLR = derive2 { name="SIMLR"; version="1.18.0"; sha256="1w05kqykwi1f3rv35pcgjd1q62h54k9zsavw54fkvgyl9h3ham42"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SISPA = derive2 { name="SISPA"; version="1.22.0"; sha256="0m22blf9y9pvfdm0qcym2m3c2vlhgg7ys2i481fvfblsfb4vqcgj"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; + SLGI = derive2 { name="SLGI"; version="1.52.0"; sha256="1cfyz3s3qq391ch4pnz2q22kknkf6ndjahkvfmwyj2ds2b8lmiw1"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; + SLqPCR = derive2 { name="SLqPCR"; version="1.58.0"; sha256="0bljq5b14wj7z04gipd8xfxwayz1i1lgnwyw9x4nvdr24byaxa4p"; depends=[]; }; + SMAD = derive2 { name="SMAD"; version="1.8.0"; sha256="03679hhgzc1fvbpy5vvx52f1ii8n7mmls9hg5inrd2ahnqcszd32"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; }; + SMAP = derive2 { name="SMAP"; version="1.56.0"; sha256="1j3xmka2nyv6qfvq0gi3wp7dp44m29v1p7xi28d58wjkqq4x9scw"; depends=[]; }; + SMITE = derive2 { name="SMITE"; version="1.20.0"; sha256="1lilgqsfgk5w80rf0mr5fwnqcmh3a872hy4zflmg3a016kaskbwx"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; + SNAGEE = derive2 { name="SNAGEE"; version="1.32.0"; sha256="1fpgsw0b8nyzbkandgs0lnc5dxfp2yx4j5yfms63sp63ch0fp227"; depends=[SNAGEEdata]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.26.0"; sha256="0m3ss821fhjcsnbdzwc93h42dhjsiklbfyizpwyzpkmq0c4l2kba"; depends=[gdsfmt]; }; + SNPediaR = derive2 { name="SNPediaR"; version="1.18.0"; sha256="0ndggr90ir090iwqw3j87j5393pw0nc3pn3hn9gaipwg8vh3x12j"; depends=[jsonlite RCurl]; }; + SNPhood = derive2 { name="SNPhood"; version="1.22.0"; sha256="06ijhbwvx4qac68h7qpynk44drafmaqi0nyf5qwsfxifh596vhv9"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + SOMNiBUS = derive2 { name="SOMNiBUS"; version="1.0.0"; sha256="1v7fpq909nv3dz0ard9bxhza55m664g1i7qflsj6w8n2jkq7kmvp"; depends=[Matrix mgcv VGAM]; }; + SPEM = derive2 { name="SPEM"; version="1.32.0"; sha256="1kw8najzffwglmxjv949n19iiprhlmvbrvghkp2cdyrhlwsy56ss"; depends=[Biobase Rsolnp]; }; + SPIA = derive2 { name="SPIA"; version="2.44.0"; sha256="0spsf8ssc59axxlbjv2xxd5drvqg9c7hmyhnnngmfwccfz5j3w89"; depends=[KEGGgraph]; }; + SPLINTER = derive2 { name="SPLINTER"; version="1.18.0"; sha256="13x43b32gl7ya0iisfml5k8bb1flf0sv4ipkjchbi13daw68jz7z"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; + SPONGE = derive2 { name="SPONGE"; version="1.14.0"; sha256="0xz3yr6pv32p7a504514ymd8ijcnwqvrc2vs8kpc5acc8x9wxla7"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; + SPsimSeq = derive2 { name="SPsimSeq"; version="1.2.0"; sha256="031y2b6prbxlpdl52g1y9x5gl9bf5n0604s99wp7m8a2xb60xhr2"; depends=[edgeR fitdistrplus Hmisc limma mvtnorm phyloseq SingleCellExperiment WGCNA]; }; + SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.6.0"; sha256="12gyq44s23r5d2yb2k8iyxfnlrrnad8qzzir7lzdsc05j1wa69yp"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; }; + SQUADD = derive2 { name="SQUADD"; version="1.42.0"; sha256="0ja02v1yzj8l414wpxwgcci5xlrnpsxljga8c5z79ri37kk19nh5"; depends=[RColorBrewer]; }; + SRAdb = derive2 { name="SRAdb"; version="1.54.0"; sha256="1b9mg42ff8a48l3796lb60chql9wmjmzy7cqdrh70g02f08nhx9w"; depends=[GEOquery graph RCurl RSQLite]; }; + STAN = derive2 { name="STAN"; version="2.20.0"; sha256="1pk10c2wj6qk3sfdwc607a2x73778b85gsb2f6njjbb0pxqym9bw"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; + STATegRa = derive2 { name="STATegRa"; version="1.28.0"; sha256="0vd6i8kp0jr9926731vf94qk2vjq4y524ryzz1qj1mb5xz5lswcq"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; + STRINGdb = derive2 { name="STRINGdb"; version="2.4.2"; sha256="0h9yw8hy7v25w3ap6bc60qiarxhrf7vaqs91mawszvqjgjv97a1d"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; + STROMA4 = derive2 { name="STROMA4"; version="1.16.0"; sha256="0akzwnccwhdm3g51fhbkchryxdp130lakk1s0vx5z3d0k45c6w5z"; depends=[Biobase BiocParallel cluster matrixStats]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.22.0"; sha256="1p69v8j2cd5pfp4bxgmyn8ga3mgd192rb7f38mrz4bmcfpv7ds4v"; depends=[biomaRt data_table ggplot2 reshape2]; }; + SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.46.0"; sha256="1lfq2qy06migrwkk5yadbipml7741dlripvfl7a5h3yj8a0wys5x"; depends=[]; }; + ScISI = derive2 { name="ScISI"; version="1.64.0"; sha256="0y6gz15salvkcrdadq5vq7crw0lk83azgicvx5ghj0jb78l7dkwm"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; + Scale4C = derive2 { name="Scale4C"; version="1.14.0"; sha256="0xq0sj9vahddnpm6d30szzfvmalizpy4zqq75s8hhq9j40165br9"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; + ScaledMatrix = derive2 { name="ScaledMatrix"; version="1.0.0"; sha256="1j96fvw1waqxbv5c8myfmhsidq370z03yz13yqmrs4nn1rpn1a06"; depends=[DelayedArray Matrix S4Vectors]; }; + Sconify = derive2 { name="Sconify"; version="1.12.0"; sha256="14sg3lahn0fnipymq2li43sl50cxrw2lxzgzffkjn8y4blwvac2i"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; + SemDist = derive2 { name="SemDist"; version="1.26.0"; sha256="0281hmyr0x6gr640bjzkdmzjn5flbnggjxff4p3hxx7l08nsb0gr"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.32.0"; sha256="0nlcj5q6g71bywzivji0399nq92bfnxmkb3szmkwl1xv0hqm4vq1"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SeqGSEA = derive2 { name="SeqGSEA"; version="1.32.0"; sha256="1qh2qb7hb8nb13jcfz8f5bkxigd439rrrixym5p3y4x6016jhpyn"; depends=[Biobase biomaRt DESeq2 doParallel]; }; + SeqGate = derive2 { name="SeqGate"; version="1.2.0"; sha256="0y9nmdcdn8bzg00a0hn5gs9fyijc1ckcg7cim2rgfzz6nwl9g9cz"; depends=[BiocManager GenomicRanges S4Vectors SummarizedExperiment]; }; + SeqSQC = derive2 { name="SeqSQC"; version="1.14.0"; sha256="0d3nrdjwmm4rsl5303rp3c045s1k6nzshsaah7nagnymgjfn96xw"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.30.0"; sha256="1bim6xp8w5a11qbazcalfdhhamzgl2yb5h6kf54n9jmqbl65qxy7"; depends=[Biobase BiocGenerics data_table gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray]; }; + SharedObject = derive2 { name="SharedObject"; version="1.6.0"; sha256="1f2rz7d1h6gilxrlj2v800y8ak6pyp1vw8p1yyqm8sqcvw30qbm4"; depends=[BH BiocGenerics Rcpp]; }; + ShortRead = derive2 { name="ShortRead"; version="1.50.0"; sha256="0zqinw3c6h5v1c5nhzkiziirws16nbviccgw8nj2d22r33dbqwp3"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rhtslib Rsamtools S4Vectors XVector zlibbioc]; }; + SigCheck = derive2 { name="SigCheck"; version="2.24.0"; sha256="1vhnv79lbrqjrhmh575yl844bckmmdfs4vawxxraswlhc2vdpnaf"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; + SigFuge = derive2 { name="SigFuge"; version="1.30.0"; sha256="0166fy52lbvbbss94hlkvgkcyih265ikzaf0v563rpv8na8lgc4b"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; + SigsPack = derive2 { name="SigsPack"; version="1.6.0"; sha256="0dx7z3vwvx9g7fsk6gnybqafvsq8na1sw95m54778nwd6kfknp1g"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; }; + SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.30.0"; sha256="1nxk3w3k4y5xn31mdwk4z4lwrwkcmf3hwvsa9zi7afrhqfsq4k2w"; depends=[Biobase limma mclust Ringo]; }; + SimFFPE = derive2 { name="SimFFPE"; version="1.4.0"; sha256="14i87h4ajrfvdyqlgpld8yxfvb6qqc0pa3c72aydmacw5p4kw9zd"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; }; + SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.14.1"; sha256="1bwdhx0ss0s8f4xdgwd7x48apn849x4dyb5hbyglcz31r5vh1qgz"; depends=[BiocGenerics DelayedArray GenomicRanges S4Vectors SummarizedExperiment]; }; + SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.4.0"; sha256="08gcx0ml63fdr3r1rshddfyawy7ay7vsvnbs7g0xrmrn7089d5yd"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran SIMLR stringr]; }; + SingleMoleculeFootprinting = derive2 { name="SingleMoleculeFootprinting"; version="1.0.0"; sha256="0ad1597fcw8r41agrmv8pdrzs4iin87c29x4ps8dzykaqhyckpan"; depends=[BiocGenerics Biostrings BSgenome data_table GenomeInfoDb GenomicRanges IRanges plyr QuasR RColorBrewer]; }; + SingleR = derive2 { name="SingleR"; version="1.6.1"; sha256="160inn831dg6vx4mnl2wm89f1cqwcn754r2iddhphqnzbqslqvfn"; depends=[beachmat BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors SummarizedExperiment]; }; + SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.28.0"; sha256="0jr11c9hz7m49xc8pi6xrr5fhbv68vafvqpzhr0pmm51vvr1vfs9"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.30.0"; sha256="015rd0mldm858ji7wac8flcjxy7055fv27vv1yip2zrxdyg6b2k3"; depends=[iPAC]; }; + Spaniel = derive2 { name="Spaniel"; version="1.6.0"; sha256="16yj4pz8fngq1j8lm4y2fw72ij7y17zadwsagjzqrdbq3wxr4p8j"; depends=[dplyr DropletUtils ggplot2 igraph jpeg jsonlite magrittr png S4Vectors scater scran Seurat shiny SingleCellExperiment SummarizedExperiment]; }; + SparseSignatures = derive2 { name="SparseSignatures"; version="2.2.0"; sha256="0mfd9kn9hbpk6l9n96vl6sfm8hzl3lmj6q79svpjh0ng067aaxpf"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls reshape2]; }; + SpatialCPie = derive2 { name="SpatialCPie"; version="1.8.0"; sha256="1f3mdjhnv01hqddxl0md749lwpmzc82vdy55591c4cqxvffh6lrj"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; }; + SpatialDecon = derive2 { name="SpatialDecon"; version="1.2.0"; sha256="0sdlz4ikddvghs3r1dbdqkhgl6351rgawy799kam6x0pkcsf2chr"; depends=[logNormReg]; }; + SpatialExperiment = derive2 { name="SpatialExperiment"; version="1.2.1"; sha256="1dx8s4mx95ibwsdfy3mb3xkavng7qwfrjwv3hbf4abxy8vyg2zl5"; depends=[BiocFileCache BiocGenerics DropletUtils magick rjson S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SpeCond = derive2 { name="SpeCond"; version="1.46.0"; sha256="1si7xmmhcklq00cpzsf1w4sg1w6bxp1yk16l25h1znhmpwby65x9"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; + Spectra = derive2 { name="Spectra"; version="1.2.0"; sha256="0fqhih567zdv8rv54zz2ly68xv8k1n0wb923xdm3i6550h41cj3r"; depends=[BiocGenerics BiocParallel fs IRanges MsCoreUtils ProtGenerics S4Vectors]; }; + SpectralTAD = derive2 { name="SpectralTAD"; version="1.8.0"; sha256="1bi7r0qid9xa0zzyh32hgi8fyw184dfc7lksrls4ngvy6282sc27"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.22.1"; sha256="0019ax9m1bnmg78hczkxi9zb2i9iqxlgmanwaxffrfj31r2qr2kr"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra MAGeCKFlute miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SplicingFactory = derive2 { name="SplicingFactory"; version="1.0.3"; sha256="0nlhpnkvcc8h9sgdhlsfsf8yz232cyfwyayqhj5c6ix4y7r1rvxm"; depends=[SummarizedExperiment]; }; + SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.32.0"; sha256="07037qz88iv6v7fzvb3xbvhqrfzn67vkj9kc8hyyscks487bzd21"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; + StarBioTrek = derive2 { name="StarBioTrek"; version="1.18.0"; sha256="0ih2ycqv6ybrzmrn26pbhpcmmbv1r9k0i0286ycd78lawd1ybqwb"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; }; + Streamer = derive2 { name="Streamer"; version="1.38.0"; sha256="0bszwkfmq4sk60842far10wlafbplin8b82bp702zkf517vjcyva"; depends=[BiocGenerics graph RBGL]; }; + Structstrings = derive2 { name="Structstrings"; version="1.8.0"; sha256="0m4lk3w506w4b8793hhqzazg3s4fqnrm4mr70ba90pq18jcffsnn"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; }; + StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.8.2"; sha256="04ac4mjh3pgdlws0aiacqg0vd7bhg890w44r7b90p947c3rk1mfw"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang rtracklayer S4Vectors stringr SummarizedExperiment VariantAnnotation]; }; + SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.8.0"; sha256="03wccycmj4krvknwk12jkp8mg6c4adk454akfybgydkydws0vh2y"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; }; + SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.10.0"; sha256="1s629qqaqs8yr20k99ahq1fk0jr8ka60s1qpvzy80wmha7khzaix"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.22.0"; sha256="16np5ik6jgbi68mhlib6yskywwbaa50mlr7m3sh1hqk889whfn1g"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors]; }; + Summix = derive2 { name="Summix"; version="1.0.2"; sha256="1ypbzhz6cqlfqn5lm7s5wj2xnylw16n44hvp2dyx5w63bxsnaxl3"; depends=[nloptr]; }; + Sushi = derive2 { name="Sushi"; version="1.30.0"; sha256="1m5l0nflhcynb3gz7b8qzvknb0s6xhds8z1yl3mbv8ic9qn2knv4"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="2.14.0"; sha256="08j4d2yyxvf8zch5paai5pr48b6g6yzh67500gv8w2pmx8mnwaml"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.29.0"; sha256="0n58x3i4k3icvhg8z60zlhpszv8bb9pain07nl9rszyvmpi71vg2"; depends=[gplots R2HTML signal]; }; + SynExtend = derive2 { name="SynExtend"; version="1.4.1"; sha256="0yl66fs0h871rdkgdnvnmjnakh6lyxg2h7l1iss8sd5ysd9xgnkz"; depends=[Biostrings DECIPHER IRanges S4Vectors]; }; + SynMut = derive2 { name="SynMut"; version="1.8.0"; sha256="09fszipz9nfhxhzyq27ng9xlip9gn29hs70gblr0ssz3g6bi7mni"; depends=[BiocGenerics Biostrings seqinr stringr]; }; + TADCompare = derive2 { name="TADCompare"; version="1.2.0"; sha256="1w7pw16kzh4wgzk97d83sysggbabarvcvjvq3z66pxf8p647fxy4"; depends=[cluster cowplot dplyr ggplot2 ggpubr HiCcompare magrittr Matrix PRIMME RColorBrewer reshape2 tidyr]; }; + TAPseq = derive2 { name="TAPseq"; version="1.4.0"; sha256="1smv992954wr26ljycram7mlf9yjx38mmcma7agqiqyfqafn7dci"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; }; + TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.4.1"; sha256="1bhn7wl8851snwklr18kxkzkismjhyzhpp1va3g5zp1726hq3gbc"; depends=[ASSIGN BiocGenerics BiocParallel ComplexHeatmap DESeq2 DT edgeR gdata ggplot2 GSVA magrittr RColorBrewer reshape2 rlang ROCit S4Vectors singscore SummarizedExperiment]; }; + TCC = derive2 { name="TCC"; version="1.32.0"; sha256="0im8gc5v28d4a5mrn4905x0kr0427x6qnr6nyawyrf6pcy13ffwd"; depends=[baySeq DESeq2 edgeR ROC]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.20.0"; sha256="01jzvhyr4z09yfz5jnjwi9r7h9sqkbfr7jgdkbj8qn3q5yd721h0"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment TCGAbiolinksGUI_data tibble tidyr XML xml2]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.18.0"; sha256="0prsrzrzhf5w6nipjvwlc61c0za8xg8xiqfc5igqlhz3hxlw7c29"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; + TCGAutils = derive2 { name="TCGAutils"; version="1.12.0"; sha256="00xbby4kzifkxm7aff9vha80kfbb311yj3fk3b4xvgmvpg9pwhiq"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; + TCseq = derive2 { name="TCseq"; version="1.16.0"; sha256="0qjac5cg7gzdrx44v50l7yz15k36lf5qvp5p4r58n1vc3b8y23yn"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; + TDARACNE = derive2 { name="TDARACNE"; version="1.42.0"; sha256="0dvgyc5w45vzf4qrvfpkh8lvvvzlsz9bw2llwbwgm8lbi35j65vs"; depends=[Biobase GenKern Rgraphviz]; }; + TEQC = derive2 { name="TEQC"; version="4.14.0"; sha256="1p07ika75mxj5w9q034lxbciwy2q5l72gmp7kkh1n7qbvslqrjf4"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; + TFARM = derive2 { name="TFARM"; version="1.14.0"; sha256="01k21y63d59f33ivgdxvvgzklard7wpj86hzwki59d9nj3mfz52b"; depends=[arules fields GenomicRanges gplots stringr]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.30.0"; sha256="1avgjv2nyr28cla0z9dvh3v0hr1f561sz2as1k53a42irbjk0var"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.12.0"; sha256="011nqd17fi3pk0am842w8dilc311pbsh5dqxzg8jw3i5wpr1ybrm"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; }; + TFHAZ = derive2 { name="TFHAZ"; version="1.14.0"; sha256="1arfl18f7ihyxjzj4lgda04bhnf7rgxyzbflzlm6l8kj8jdkp10v"; depends=[GenomicRanges IRanges S4Vectors]; }; + TFutils = derive2 { name="TFutils"; version="1.12.2"; sha256="1rl79zjyfq0dg42qvf1hn20s94cjw6mwclwl7mvy9nlxb04wqvj8"; depends=[BiocFileCache dplyr DT GSEABase httr magrittr miniUI readxl rjson Rsamtools shiny]; }; + TIN = derive2 { name="TIN"; version="1.24.0"; sha256="1wmsyxj9vsxl3c8mbzd8h0zvgzrskzqxf5b0r40nd5iky038amxz"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; + TMixClust = derive2 { name="TMixClust"; version="1.14.0"; sha256="0vf3a81b6xp8bafx0wh3af2x5wyvx2nkq237lzpnhp15h6m9wckq"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; + TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.8.0"; sha256="0qjgsjymgxs68zvkyl37vrdybymfkqdy5hjd7i9nlfa33nmh69pz"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; }; + TOAST = derive2 { name="TOAST"; version="1.6.0"; sha256="1k1hn5gp4rhvws2h40mwflsdmlad0qjxixwm1a76xhgpdhkj3cfb"; depends=[corpcor EpiDISH limma nnls SummarizedExperiment]; }; + TPP = derive2 { name="TPP"; version="3.20.1"; sha256="1m0s74xxzxdpizxal0wq6p848qs1v2v7hhqjsjh7wrjmb0ff4k99"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; }; + TPP2D = derive2 { name="TPP2D"; version="1.8.0"; sha256="0vfiap2qw740ll88dhnkc5j95gxw61zqp3z1s7wd7j4pasg13cwc"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; }; + TRONCO = derive2 { name="TRONCO"; version="2.24.0"; sha256="0cvf7x6hzkfjx4k06dny3s97nha63qws1jxv6p7fa72hsnm4ylik"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TSCAN = derive2 { name="TSCAN"; version="1.30.0"; sha256="1xpgqafy3irfdhc63qgkim1ydkdf9i912ad4b41yyzdvn8infmyz"; depends=[combinat DelayedArray fastICA ggplot2 gplots igraph Matrix mclust mgcv plyr S4Vectors shiny SingleCellExperiment SummarizedExperiment TrajectoryUtils]; }; + TSRchitect = derive2 { name="TSRchitect"; version="1.18.0"; sha256="02xjp3ibasnwrsrjvs9dplnf8qvlmmy67l3ffadgsjv69fcdxck9"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + TTMap = derive2 { name="TTMap"; version="1.14.0"; sha256="1kl03hilvpgcxf6an684kn77wa7slf2pp5ksq67bk7fqcqdxyncl"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; + TVTB = derive2 { name="TVTB"; version="1.18.0"; sha256="1zz14wph4c2nfpcbbfjs0mq3h6ifj8qrlhwhys2858w2yp1bqhvg"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.22.0"; sha256="0ym8v2hs2a2b53wb7kp77dbzs1smb5fci9jw52kypjnc23gqbh3q"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TargetScore = derive2 { name="TargetScore"; version="1.30.0"; sha256="0wjgi2fmdyflnc4shmkj11jfxgsydjm8494q0p9mxbskiyv850mn"; depends=[Matrix pracma]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.48.0"; sha256="181ggjmqpi0hm2b4r8g7igw13jl8pqh31gv7xy3ppn5f0wsjsnal"; depends=[assertthat ncdf4]; }; + TileDBArray = derive2 { name="TileDBArray"; version="1.2.1"; sha256="1n88c3i0yjqsxrbqrsg5nzx4ryx4b3k1vz5xm0xlnxvzbib3899r"; depends=[DelayedArray Rcpp S4Vectors tiledb]; }; + TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.10.1"; sha256="1095a2ynxcf9xiac5cjzslcbmjnjpbby0vy7d84qagdiq1w6mrhn"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; }; + TimiRGeN = derive2 { name="TimiRGeN"; version="1.2.0"; sha256="06ddrkvppbx1fwh66ycxk1vprk01bfq40671s3n7jbfldfysnyjl"; depends=[biomaRt clusterProfiler dplyr FreqProf ggdendro gghighlight ggplot2 gplots gtools igraph Mfuzz MultiAssayExperiment RCy3 readxl reshape2 rWikiPathways scales stringr tidyr]; }; + TissueEnrich = derive2 { name="TissueEnrich"; version="1.12.0"; sha256="16zq2z1mp0nal0a9h8rq398y90clabkzd503li67yb8iz21n4lin"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.30.0"; sha256="0j1pra14gsadp684hxz2w4cz8c64p7hhajkakm5n2m3019ws96gw"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; }; + TnT = derive2 { name="TnT"; version="1.14.0"; sha256="1gcs8vcqayzi0vg05zqamn7xpc7ny13k99zc60rcz5ln31srq0h2"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; + ToxicoGx = derive2 { name="ToxicoGx"; version="1.2.1"; sha256="0c5bgg73k7x5zqhvpjqfifzpsn8671ag0051d662ws2ydmycp7vw"; depends=[assertthat Biobase BiocParallel caTools CoreGx data_table downloader dplyr ggplot2 jsonlite limma magrittr reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; }; + TraRe = derive2 { name="TraRe"; version="1.0.0"; sha256="01rjslihmis6l0x4c4g03rh7qfgqidbwa0gdqz0n8pgjydy519nl"; depends=[BiocParallel dqrng ggplot2 glmnet gplots gtools hash igraph matrixStats pvclust R_utils SummarizedExperiment vbsr]; }; + TrajectoryGeometry = derive2 { name="TrajectoryGeometry"; version="1.0.0"; sha256="0yjscggc0ysnznzqk3inm0mm2k0nyabxg71h3fql6nq4jzdn3r84"; depends=[ggplot2 pracma rgl]; }; + TrajectoryUtils = derive2 { name="TrajectoryUtils"; version="1.0.0"; sha256="1b7mg3ypp1ay98cav47h9vn692lx0n9b5b0hpansgnkr5prb823b"; depends=[igraph Matrix S4Vectors SingleCellExperiment SummarizedExperiment]; }; + TransView = derive2 { name="TransView"; version="1.36.0"; sha256="1n1kfvxf2wixyv5qlgmcmqdd44d3vkkywdvc8w531gjv8cxbpn7a"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; }; + Travel = derive2 { name="Travel"; version="1.0.0"; sha256="1r4ydwxf8h45isd5yshfpl5b8s739ihlkazq9rpnvbrrrm3sv1lj"; depends=[Rcpp]; }; + TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.4.2"; sha256="0kjasyx52n5gafil7vminssynarngna705d70rbs5c9pg9ww4bzi"; depends=[ape igraph RedeR]; }; + TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="2.0.3"; sha256="08wyapshn3r1b0hbcmrjgw9vqbgv5xfkdwps8hjpf7xxbldacscz"; depends=[ape BiocGenerics BiocParallel Biostrings dplyr IRanges rlang S4Vectors SingleCellExperiment SummarizedExperiment treeio]; }; + Trendy = derive2 { name="Trendy"; version="1.14.0"; sha256="0idsac35j1wf0n8r6sb3mgqm7ldga05mp7xj429v7i9lqxswqccd"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; + TurboNorm = derive2 { name="TurboNorm"; version="1.40.0"; sha256="1mblkfdic863sk88ic7g6z2fjkfj6hpz1rki9irid47w644fnxf6"; depends=[affy convert lattice limma marray]; }; + TypeInfo = derive2 { name="TypeInfo"; version="1.58.0"; sha256="0l71asilfz0868d792s64fsxw63jg2s6iqx215m9mix8cszbh4wy"; depends=[]; }; + UMI4Cats = derive2 { name="UMI4Cats"; version="1.2.1"; sha256="1iqrnl9bl9rgcpm6wb8cg70hdm39bbl2pin59yiivjzm0zwyvwxp"; depends=[annotate BiocFileCache BiocGenerics Biostrings BSgenome cowplot DESeq2 dplyr fda GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magick magrittr org_Hs_eg_db R_utils rappdirs Rbowtie2 RColorBrewer regioneR reshape2 rlang Rsamtools S4Vectors scales ShortRead stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene zoo]; }; + UNDO = derive2 { name="UNDO"; version="1.34.0"; sha256="0pys5nfznspfm45pacfygfafxr93pj76wxa9ij1sj5xhn0sr1wg0"; depends=[Biobase BiocGenerics boot MASS nnls]; }; + Ularcirc = derive2 { name="Ularcirc"; version="1.10.0"; sha256="1nb902vi30gcs8msdm4aslvv0qnbaz4pl3zsxwxg8s8p1hq8q88k"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr S4Vectors shiny shinydashboard shinyFiles shinyjs Sushi yaml]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.32.0"; sha256="153wz9pwzijah0qjaxmss0rkbwlnbihpjmliggs1ns84nya4v8ls"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="2.12.0"; sha256="0jxi4d0zcypcc3kvvzhdw9bbzf719s54wwq3sgkwkmnwhb027xix"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; + VCFArray = derive2 { name="VCFArray"; version="1.8.0"; sha256="0y1rgncfa1kyqzqk194c8lfqjhi0qlb4lljmba9ax82iican5pcz"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + VERSO = derive2 { name="VERSO"; version="1.2.0"; sha256="1jgycqm1pmz5is8rn376lr0lmivkfqp1bkpbilm9d2z2ibzhnfzz"; depends=[ape Rfast]; }; + VaSP = derive2 { name="VaSP"; version="1.4.0"; sha256="0v2v0gp6xghma36z9bs4yqjgw4cnzamr5jl4cybpbg7c54jh5czs"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors Sushi]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.54.0"; sha256="0f118783a1rp0j00ddrrcgj1lg1rfz4wj2kx4fccq3nqr2n4j0bz"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VarCon = derive2 { name="VarCon"; version="1.0.0"; sha256="1bz2ppyysni1aj08024qbp9k55wwm73lxga2f0ln8hm8ik3zi8kh"; depends=[Biostrings BSgenome GenomicRanges ggplot2 IRanges shiny shinycssloaders shinyFiles]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.38.0"; sha256="0c9r00j8a3bs6n0dv4wi17jc1ljzvr3r2bi4h9axhcsf2ip906rh"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges MatrixGenerics Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantExperiment = derive2 { name="VariantExperiment"; version="1.6.0"; sha256="0p9ds0spm7bi4l9scfvrn78v8jfdd7nsal344bq246pfpxyd567i"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.28.0"; sha256="0abhrk53csd9jz9sv4q1qr74jax9mbj2icbz1iilf1123nvnjypd"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; + VariantTools = derive2 { name="VariantTools"; version="1.34.0"; sha256="1gpzrln2clfrja8rzxhsis6bi1xqglh3h2lhvqlnrx4lqxhbkv9c"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + VegaMC = derive2 { name="VegaMC"; version="3.30.0"; sha256="0wah3679zyx5q4p3fq5nv1z86nsqgp7n4k40l42hflc5bb3adrgx"; depends=[Biobase biomaRt]; }; + VennDetail = derive2 { name="VennDetail"; version="1.8.0"; sha256="0y24vrax9hp2xjycdr74phs3032hhjaf6hvmh0xdx891val91f6h"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; }; + ViSEAGO = derive2 { name="ViSEAGO"; version="1.6.0"; sha256="0adyxxvp66pb69hbxs6cg5ny9ggixw7fn3p5s30wfd8xp7d3zf38"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut fgsea ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly processx R_utils RColorBrewer scales topGO UpSetR]; }; + VplotR = derive2 { name="VplotR"; version="1.2.0"; sha256="099z7267bpcw52xb3kd61mj0096knpgalbgf62d2pvdx74vd793l"; depends=[cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr RColorBrewer reshape2 Rsamtools S4Vectors zoo]; }; + Wrench = derive2 { name="Wrench"; version="1.10.0"; sha256="0yssmqayaryrc0asjjqxdipqdfg309llrzldx38jrfgdsza6bvs0"; depends=[limma locfit matrixStats]; }; + XCIR = derive2 { name="XCIR"; version="1.6.0"; sha256="0cavql8fyw7vrmkdrd7cn1l5pmlgysqcfnbmgjc9fam81h3lqmcs"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; }; + XDE = derive2 { name="XDE"; version="2.38.0"; sha256="0wdc0lgjijggxbqkbxcy2hlr3kyrxydq7dd1a4mqmc2sqjnfn3wk"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools mvtnorm RColorBrewer siggenes]; }; + XINA = derive2 { name="XINA"; version="1.10.0"; sha256="00h5r2iwyy5w4mcga6155gllbiy834bfzkmy60pzsckm8j7zzs95"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; + XNAString = derive2 { name="XNAString"; version="1.0.2"; sha256="11jxmjyk6riivgsfjvwwdq9d2h9787dgz27vlib9khr1q40vh5ia"; depends=[Biostrings BSgenome data_table formattable future_apply GenomicRanges IRanges Rcpp S4Vectors stringi stringr]; }; + XVector = derive2 { name="XVector"; version="0.32.0"; sha256="1cw34gd9iaspl0v737xl7rngq63zrj03a5ngai15ggrnv1sq2aqr"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + Xeva = derive2 { name="Xeva"; version="1.8.0"; sha256="09a3f81fdbak94q8v11ww6s55fyzjqdynnd7jdpxrkzmg4f524y9"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; }; + YAPSA = derive2 { name="YAPSA"; version="1.18.0"; sha256="1xfkgjlm0rxz82qcaqzx95cwirxifd9dsswjg3zcqmz03v7a0gz2"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST limSolve magrittr PMCMR pracma reshape2 SomaticSignatures VariantAnnotation]; }; + a4 = derive2 { name="a4"; version="1.40.0"; sha256="0bwn185admy5k99fkd2dhhvy7x1f75r0mqn5k24dbbg0paw6nnr8"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; + a4Base = derive2 { name="a4Base"; version="1.40.0"; sha256="101w4i0w8n7qhki22qr8l8wk8w6zalzmcywqm2g4238qv7xbnr8p"; depends=[a4Core a4Preproc annaffy Biobase genefilter glmnet gplots limma mpm multtest]; }; + a4Classif = derive2 { name="a4Classif"; version="1.40.0"; sha256="1lz85bys5dp5d1ir9c9c4wy85wkk62s14niyzzxaqrxpsji2p2iw"; depends=[a4Core a4Preproc Biobase glmnet pamr ROCR varSelRF]; }; + a4Core = derive2 { name="a4Core"; version="1.40.0"; sha256="00fi753nsayv0xspavw8r9ni1sim8ng33hp3d3kj2b8ihygd1s10"; depends=[Biobase glmnet]; }; + a4Preproc = derive2 { name="a4Preproc"; version="1.40.0"; sha256="1jibm2f5glzsrvl64hxc5sf59d4w6ry0f663p619hfr44mi1mpri"; depends=[Biobase BiocGenerics]; }; + a4Reporting = derive2 { name="a4Reporting"; version="1.40.0"; sha256="09jjfby5znmg2fdkhpbinx2v21zrfa44qq7cylcn9ipffqx3pk86"; depends=[xtable]; }; + aCGH = derive2 { name="aCGH"; version="1.70.0"; sha256="0x1d3byyapzn1nn4s1capr6a0krhail4bdgjrcwn0rv95fd2mzi1"; depends=[Biobase cluster multtest survival]; }; + abseqR = derive2 { name="abseqR"; version="1.10.0"; sha256="1xvk84gd1lfq1icrfwwd6y79zywrisfnc3knprigzzax31aks32c"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; + acde = derive2 { name="acde"; version="1.22.0"; sha256="19ys7qc167s1fdma6ija9ach1a2i5al4bz6h6f45a62aryi7ppxw"; depends=[boot]; }; + adSplit = derive2 { name="adSplit"; version="1.62.0"; sha256="0l90kd88z7i65rlhzi571cw70jff2zl63029c9sfvkkk1yc2v7jv"; depends=[AnnotationDbi Biobase cluster GO_db KEGGREST multtest]; }; + adductomicsR = derive2 { name="adductomicsR"; version="1.8.0"; sha256="1k2ns0xmdwbfwnjfafa3vc20nydqqgkm6kri49aa2dhlwanh3d9k"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; }; + affxparser = derive2 { name="affxparser"; version="1.64.1"; sha256="0lr0kmp087j2g4i5kd7rh8a038ymp6z82861lyql2fwk5dh80043"; depends=[]; }; + affy = derive2 { name="affy"; version="1.70.0"; sha256="0vz5y92gqcm0qk57qlba85bk683lzdr7vkmxv109rq6i17vdkkrm"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; + affyContam = derive2 { name="affyContam"; version="1.50.0"; sha256="0242ga68wrdk1kcmxfdbq73a0d3zhrzdlzkzphfg3q0zjbvg49jj"; depends=[affy affydata Biobase]; }; + affyILM = derive2 { name="affyILM"; version="1.44.0"; sha256="1q26cyq02y443v6phl73ccjn9l0a2lry51xr34wnyk16v5w5v8nn"; depends=[affxparser affy Biobase gcrma]; }; + affyPLM = derive2 { name="affyPLM"; version="1.68.0"; sha256="0w2c605kljf6s8fvpb3420izpjkiwgab849xv0lph9zxdf5xwl32"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; + affyPara = derive2 { name="affyPara"; version="1.51.0"; sha256="01165f84snc3ksk0ghw631i2l5jklp4n826jwy5926wvxy3zlwz0"; depends=[affy affyio aplpack snow vsn]; }; + affycomp = derive2 { name="affycomp"; version="1.68.0"; sha256="07my5scdh6h0y1bx1h9y5m4fa8bnmw389f83gkb7cf19w4vp36b2"; depends=[Biobase]; }; + affycoretools = derive2 { name="affycoretools"; version="1.64.0"; sha256="1dx861spr3kn1dxwhf43s5l1r7bmrq0h6538l3q64iiwzzc6krdh"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; + affyio = derive2 { name="affyio"; version="1.62.0"; sha256="07kibqsm888g06qqqa4648ph877kriy74kprbri8nyx83y8aspjr"; depends=[zlibbioc]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.66.0"; sha256="1bib92p6iyf3gfgwmqnw864zi3k7wy46l17wis0h898ywbvnhbka"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; + aggregateBioVar = derive2 { name="aggregateBioVar"; version="1.2.0"; sha256="09mq7ypc7miablslfsbx1s5nz17ams2ri2ynbbs2s1v50risspbq"; depends=[Matrix rlang S4Vectors SingleCellExperiment SummarizedExperiment tibble]; }; + agilp = derive2 { name="agilp"; version="3.24.0"; sha256="05ks3l3j74n5hgqsywavcylrk7lyg07b92c5qk6krvsckm23ksgv"; depends=[]; }; + airpart = derive2 { name="airpart"; version="1.0.1"; sha256="0cyyk0w6cyx0rw0gd9z7ha02b1v79x7fz04vvknn0ylkvhhdr9i7"; depends=[apeglm clue ComplexHeatmap dplyr dynamicTreeCut emdbook forestplot ggplot2 lpSolve matrixStats mclust pbapply plyr RColorBrewer rlang S4Vectors scater SingleCellExperiment smurf SummarizedExperiment]; }; + alevinQC = derive2 { name="alevinQC"; version="1.8.0"; sha256="1aq3j1k66sl09nfalgy18xns42lpwc9wph052096yr5rfqqq0bk6"; depends=[cowplot dplyr DT GGally ggplot2 rjson rlang rmarkdown shiny shinydashboard tximport]; }; + alpine = derive2 { name="alpine"; version="1.18.0"; sha256="157g24rf5pb9k2l3d608sp9kk9m8k39aipa39lg6qdl92qrqv6a1"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; + alsace = derive2 { name="alsace"; version="1.28.0"; sha256="1idjymd39cnjfmw31ay6kh0y8z2p3c1kq3dnklzf5w4q6cpiaqqq"; depends=[ALS ptw]; }; + altcdfenvs = derive2 { name="altcdfenvs"; version="2.54.0"; sha256="0b7a9cqf33klazz7301agifwdqnk41jk58r69s70bygl51lrx87a"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; + amplican = derive2 { name="amplican"; version="1.14.0"; sha256="11brvgcp6x432hn1q8q26agnf8nbgrr4zziv930jly2lwa1i2865"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; }; + animalcules = derive2 { name="animalcules"; version="1.8.1"; sha256="1vfnpd2r6pxqdm5s68xdaph1qa2p0zzrimkg2qmvr8vb26vsk10z"; depends=[ape assertthat biomformat caret covr DESeq2 dplyr DT forcats ggplot2 glmnet GUniFrac lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC reactable rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; }; + annaffy = derive2 { name="annaffy"; version="1.64.2"; sha256="03y633vgxprd2abhanj4sanmb4ymz7az5aiasxn6wjzawiqjdcb1"; depends=[AnnotationDbi Biobase BiocManager DBI GO_db]; }; + annmap = derive2 { name="annmap"; version="1.34.0"; sha256="0yarbfvxy44zpydi89gkw16cq09p0md2p0pqn585m3ms0mcxnyh4"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; + annotate = derive2 { name="annotate"; version="1.70.0"; sha256="13ny596wh65sw7dbw0zd4h84d6k1w99g91c4sqy83mdzgpv73sz7"; depends=[AnnotationDbi Biobase BiocGenerics DBI httr XML xtable]; }; + annotationTools = derive2 { name="annotationTools"; version="1.66.0"; sha256="18dd8saqx17fplvv5sbfz4p9fy7ksy3n9348rd3qlczihcrh9i3w"; depends=[Biobase]; }; + annotatr = derive2 { name="annotatr"; version="1.18.1"; sha256="1ls1qdfppcxysggi3bghrnspb5a3s40pm2mj4x0whc7c40cf90mg"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; + anota = derive2 { name="anota"; version="1.40.0"; sha256="039bmcv5l44gszb6xapbihp3mfqdaaa8mfc05y702p78i7x93g5y"; depends=[multtest qvalue]; }; + anota2seq = derive2 { name="anota2seq"; version="1.14.0"; sha256="08pmw7zmlwpshsdx1xrplx8cm78wh67hxyjj80jp4g6fx35f6m22"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + antiProfiles = derive2 { name="antiProfiles"; version="1.32.0"; sha256="065q4ifqaahb3aff8qqknvn135av4vs527bpj7ap5cwhqg93j6hb"; depends=[locfit matrixStats]; }; + apComplex = derive2 { name="apComplex"; version="2.58.0"; sha256="1198gks7rd6wq74d2shz41w40dqv1nwv3ayn49g6nww10al7cmqg"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; + apeglm = derive2 { name="apeglm"; version="1.14.0"; sha256="1xld6ar440achik4dbd7vhiw6jfj0sb96jm52n7hav5bv4gag3mh"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; + appreci8R = derive2 { name="appreci8R"; version="1.10.0"; sha256="1ar199yka7n9w9j0j76v4lybjx0yhmjrjzcdvqywragjqzkf2w10"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; + aroma_light = derive2 { name="aroma.light"; version="3.22.0"; sha256="1yvq6l1p8cpijvlib4fn9y88ihn0gaalrmgx82jgrfmnszkqn3y5"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; + arrayMvout = derive2 { name="arrayMvout"; version="1.50.0"; sha256="0n0rsjjkf59d4mq97j305yflal6y96gqssds04sk8xc596xkbv67"; depends=[affy affyContam Biobase lumi mdqc parody]; }; + arrayQuality = derive2 { name="arrayQuality"; version="1.70.0"; sha256="19c8n48977xwsk9lq4j8dyp0hlxas58ln77z7jyp3p0r2s52c51s"; depends=[gridBase hexbin limma marray RColorBrewer]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.48.0"; sha256="1a7zm2myrizpn52lx07d7n9kaz358fsfdbm49546lanwhad3pi2v"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; }; + artMS = derive2 { name="artMS"; version="1.10.2"; sha256="1p0adqi8vh7nm207l18z981ghkb5x6280iswmy7plil5cv3dn17f"; depends=[AnnotationDbi bit64 circlize cluster corrplot data_table dplyr getopt ggdendro ggplot2 ggrepel gplots limma MSstats openxlsx org_Hs_eg_db pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; }; + atSNP = derive2 { name="atSNP"; version="1.8.0"; sha256="0adq27bfhy0br9948sdvxv829pvahl1cimqd4fc62pdx8caika8v"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 lifecycle motifStack rappdirs Rcpp testthat]; }; + attract = derive2 { name="attract"; version="1.44.0"; sha256="0h10lbjq73xsdgp631hkac88zl98r20vcr0xmlzg2f1jwq68gpfc"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; + autonomics = derive2 { name="autonomics"; version="1.0.1"; sha256="12y5gb1qxjf5dc6h8vbs8yyhsnhbg94yc5giydn4f3v16il3d2d9"; depends=[abind assertive BiocFileCache BiocGenerics colorspace data_table edgeR ggplot2 ggrepel gridExtra limma magrittr matrixStats MultiAssayExperiment pcaMethods R_utils rappdirs readxl rlang S4Vectors scales stringi SummarizedExperiment tidyr]; }; + awst = derive2 { name="awst"; version="1.0.0"; sha256="0m0h4xi0i3v7kaycw8qppji5f9qcx8w100y15czj1mpq1z7pnchx"; depends=[SummarizedExperiment]; }; + bacon = derive2 { name="bacon"; version="1.20.0"; sha256="1yp0675n1g8rxdjdd7w8al5c9jq96h0kfm8218mc50z0p2fasgbj"; depends=[BiocParallel ellipse ggplot2]; }; + ballgown = derive2 { name="ballgown"; version="2.24.0"; sha256="0ff8z4pfgzai2q4aafclg36bhsi9jwl9xhh1p9fqhmikisscq7i1"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bambu = derive2 { name="bambu"; version="1.2.1"; sha256="12zpqksvbn03qh366paxb7nrlimcam5p38iqm21dpzgn5zf42syn"; depends=[BiocGenerics BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges glmnet IRanges Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment]; }; + bamsignals = derive2 { name="bamsignals"; version="1.24.0"; sha256="1ljrip0jlxjcljqac7vzvwqbcqil5v4f4s4bhpq4akvdkshas6mn"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + banocc = derive2 { name="banocc"; version="1.16.0"; sha256="1vhq57v80fxlix5j5rznp37ib82nnhckh1imwc8appjjkya1gv8j"; depends=[coda mvtnorm rstan stringr]; }; + barcodetrackR = derive2 { name="barcodetrackR"; version="1.0.0"; sha256="13hypkvyjd9kgzi6lrkm0m9rc1yvxvnk8y84i8zqja5nsasb47sf"; depends=[circlize cowplot dplyr ggdendro ggplot2 ggridges magrittr plyr proxy RColorBrewer rlang S4Vectors scales shiny SummarizedExperiment tibble tidyr vegan viridis]; }; + basecallQC = derive2 { name="basecallQC"; version="1.16.0"; sha256="1i8pwd5d68v9iwv9rmckqxpppx2pa90w1wrws55l1dpkijvg8zmc"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; + basilisk = derive2 { name="basilisk"; version="1.4.0"; sha256="1nzbn3f2jzvg3a3m6wgksi4cvamqas2q7csdk4ir7fcirasf536v"; depends=[basilisk_utils dir_expiry reticulate]; }; + basilisk_utils = derive2 { name="basilisk.utils"; version="1.4.0"; sha256="0qbm6rj6h059hakflbwz4j4f59311jhbk5dnpx11kyixh5pgjk7v"; depends=[dir_expiry]; }; + batchelor = derive2 { name="batchelor"; version="1.8.1"; sha256="1bkk69b5llkmvmpsnhymwjm2szmzypgszfsw8mak1b5ms5zf8lr0"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp ResidualMatrix S4Vectors ScaledMatrix scuttle SingleCellExperiment SummarizedExperiment]; }; + bayNorm = derive2 { name="bayNorm"; version="1.10.0"; sha256="1xynvcv1dsqbg96bhr3kajv19i2lad66cqlk2bqh69vaxw5nwkb6"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; + baySeq = derive2 { name="baySeq"; version="2.26.0"; sha256="0hyc0sl2nf18bz0jxbzim0v41zwh2rnnr7l3p6zkk9wnw5gn7bbc"; depends=[abind edgeR GenomicRanges]; }; + bcSeq = derive2 { name="bcSeq"; version="1.14.0"; sha256="0z05w7sshvf46gjydfi6gxzfm5klghk6dwm6mypnf0pxrkdvk26i"; depends=[Biostrings Matrix Rcpp]; }; + beachmat = derive2 { name="beachmat"; version="2.8.1"; sha256="06bpfpddsl49csxrs8hlx5pv0absc2wdcparchf8qqaqydazwci2"; depends=[BiocGenerics DelayedArray Matrix Rcpp]; }; + beadarray = derive2 { name="beadarray"; version="2.42.0"; sha256="10gzkkwlnx267fcvrj3f8znvg8lkm3db7p2l11pbhgxh0mbq8qi5"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; }; + beadarraySNP = derive2 { name="beadarraySNP"; version="1.58.0"; sha256="0bf4mc59y9mck450i16bpkk6pdkmaxscm7ds1q008892vwzk9h2q"; depends=[Biobase quantsmooth]; }; + bgx = derive2 { name="bgx"; version="1.58.0"; sha256="18n6j2ihv85rhai5sf5k3mwf9nkc2nl2sinx3rrs6sbl529g4mw4"; depends=[affy Biobase gcrma Rcpp]; }; + bigPint = derive2 { name="bigPint"; version="1.8.0"; sha256="0yrg9x1a92zmz7j5hk77cph1jg82mkpr7k7qi9fdr6z5nqq6fgz6"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; }; + bigmelon = derive2 { name="bigmelon"; version="1.18.0"; sha256="061f0hc4m4nvdr6298pg3inpx1z2bpsm9nlxqs3v7n58q15xyzri"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; + bioCancer = derive2 { name="bioCancer"; version="1.20.02"; sha256="1phiq5829lq4dx0dfgw4l0z7kwkqrbjb19ldv32b2ay18aax067x"; depends=[AlgDesign AnnotationDbi Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier GO_db htmlwidgets org_Bt_eg_db org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; + bioDist = derive2 { name="bioDist"; version="1.64.0"; sha256="1y1x9q9aa76gbhsyfn638rxp5icjvq30fv3a4205xh7g5jwlf6yw"; depends=[Biobase KernSmooth]; }; + bioassayR = derive2 { name="bioassayR"; version="1.30.0"; sha256="1mlv80w8a7l8cii3dfqvanvh0qdqvcg8c1iiq4xlyvkjxfs64ka1"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.24.0"; sha256="1ybyhmrcvj6k1laxw9bc8jbn533frkzh9k8kl1ibd5pi368rfqzn"; depends=[Biobase broom dplyr tidyr]; }; + biobtreeR = derive2 { name="biobtreeR"; version="1.4.0"; sha256="0pynx4ps1qxsn13ba6zyg6h5dqlp2y7qish67m7sdjns079zh061"; depends=[httpuv httr jsonlite stringi]; }; + biocGraph = derive2 { name="biocGraph"; version="1.54.0"; sha256="12bmj9kdlylp02cfwviak7y323ndccl2694rvi4cdg4vsx7v3ya3"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; + biocViews = derive2 { name="biocViews"; version="1.60.0"; sha256="0pc5ll59vm8a9s1nrdc7p9wk11a52rrz669fsrrqd8qapa8p6wfd"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; }; + biocthis = derive2 { name="biocthis"; version="1.2.0"; sha256="08awghsg7q22csb0j9dr8dpb1vkn9gcs9qnhhljxifkw2ahbqia4"; depends=[BiocManager fs glue rlang styler usethis]; }; + biodb = derive2 { name="biodb"; version="1.0.4"; sha256="1apnbr5p619nsrhd2drm6arj69sw0wijv8ap7dfrndqkffrpbfmx"; depends=[chk jsonlite lgr lifecycle openssl plyr progress R6 rappdirs Rcpp RCurl RSQLite stringr testthat withr XML yaml]; }; + biomaRt = derive2 { name="biomaRt"; version="2.48.3"; sha256="096s243yzbhhz3wsm7azml5sznqczmcpi5g0gnb02mah1przczfx"; depends=[AnnotationDbi BiocFileCache digest httr progress rappdirs stringr XML xml2]; }; + biomformat = derive2 { name="biomformat"; version="1.20.0"; sha256="1wgshkddxbmpsihpkm0dp7vqp59ns6iqbx574y80n2pxb8dx8sy9"; depends=[jsonlite Matrix plyr rhdf5]; }; + biomvRCNS = derive2 { name="biomvRCNS"; version="1.32.0"; sha256="0wyzj422smr4m9mswzn9inc1sn86pnia7jmd6k28nd2a7fjyrm16"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; + biosigner = derive2 { name="biosigner"; version="1.20.0"; sha256="159fbkymn92li7dinsm56nsacjp8wnhsljv7airgs9m82p8wd5sl"; depends=[Biobase e1071 MultiDataSet randomForest ropls]; }; + biotmle = derive2 { name="biotmle"; version="1.16.0"; sha256="01smkmbv40yprgrgi2gjnmi8ncqyrlkfdxsh33ki20amcx32nc7f"; depends=[assertthat BiocGenerics BiocParallel doFuture dplyr drtmle future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; }; + biovizBase = derive2 { name="biovizBase"; version="1.40.0"; sha256="14jyyg3ggdhaqhp0j4qf6dapykh76fygbaa4lr7czqbc5mr0iw23"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + biscuiteer = derive2 { name="biscuiteer"; version="1.6.0"; sha256="0f4kk4v2c5diq0fbvyvgwjd1kjk9izr6n9wfrlrr7wbx4pz3c3h6"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + blacksheepr = derive2 { name="blacksheepr"; version="1.6.0"; sha256="1iiq9hvgwiwnrf4m4mr6xzv76q1278n3j4xdxylybi5q65rdy5mf"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; }; + blima = derive2 { name="blima"; version="1.26.0"; sha256="0jwpknr27aypk33nhvx9a3p19rzvfd9qp8d3xi3h0m97xv05nsg2"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; + bluster = derive2 { name="bluster"; version="1.2.1"; sha256="128zd5vwlhmrkq0bpp1dxnkrcqfz1mjmdjlla4wqbjv7v6yyn6lg"; depends=[BiocNeighbors BiocParallel cluster igraph Matrix Rcpp S4Vectors]; }; + bnbc = derive2 { name="bnbc"; version="1.14.0"; sha256="1qgb32bhiyiz1v56x9by53s13wanlhp99axay5j91zdvgnmvmdry"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; }; + bnem = derive2 { name="bnem"; version="1.0.0"; sha256="0lvqpbn5p9bvl33hyxcsdvjiysvq06ixx74q4j168k8qzpldaswv"; depends=[affy binom Biobase CellNOptR cluster epiNEM flexclust graph limma matrixStats mnem RColorBrewer Rgraphviz rmarkdown snowfall sva vsn]; }; + brainflowprobes = derive2 { name="brainflowprobes"; version="1.6.0"; sha256="0nsb1nlzz49xlrmhcyj1jkrynz6bix3ajpq2s26g2wrk9gcaa3vw"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; }; + branchpointer = derive2 { name="branchpointer"; version="1.18.0"; sha256="1y6id446sjyfa1lpgqzcrnwxxzf0gi52hr33agpwpkpfw5ch4ysb"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; + breakpointR = derive2 { name="breakpointR"; version="1.10.0"; sha256="1mhnmyjk32la1ihlks73pnsas2zwfhgz8dxja6dirnncq7r36md8"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; + brendaDb = derive2 { name="brendaDb"; version="1.6.0"; sha256="1lnvgq2wqy40x1yn9j29kkfdw7bbjzy7r06nzdxsc88ml9v88jqs"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; }; + bridge = derive2 { name="bridge"; version="1.56.0"; sha256="1d6621kd5x7b9s6l7clbs3vf17aljhxgpj7m8ji0j2swidii7m0x"; depends=[rama]; }; + bsseq = derive2 { name="bsseq"; version="1.28.0"; sha256="1xpv85hr681kkkilsnasndkszwmzbzq11y0lff4na2ilsm7sqmmi"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; }; + bumphunter = derive2 { name="bumphunter"; version="1.34.0"; sha256="0wi38vwfi8qr10x4xifhylxx7vfc6fqvqs649iq7lf0y7islwq2v"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + cBioPortalData = derive2 { name="cBioPortalData"; version="2.4.8"; sha256="1f5iz7hdxp0zr088d2vg3wwvd7na6g9s6p0fywzwjc51s4cxagsr"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; }; + cTRAP = derive2 { name="cTRAP"; version="1.10.0"; sha256="1p8z5vvmny7h76rsd8pfwinxx34q8hvacm35gbr3sgyyi3y618dx"; depends=[binr biomaRt cowplot data_table dplyr DT fastmatch fgsea ggplot2 ggrepel highcharter httr limma pbapply R_utils readxl reshape2 rhdf5 scales shiny tibble]; }; + caOmicsV = derive2 { name="caOmicsV"; version="1.22.0"; sha256="1h43ml0alpcyafafn8rbm784gr0xpy00942vghqyf3i3y1zq0522"; depends=[bc3net igraph]; }; + calm = derive2 { name="calm"; version="1.6.0"; sha256="1k25dn8xvnpqhlzzmhjqzcpx3i7mc2avxgd8mwr116jwg4fwk077"; depends=[mgcv]; }; + canceR = derive2 { name="canceR"; version="1.26.0"; sha256="170v9ln5p399vzh6l4xl28yfbi93kj65m0pb4980mrzpb8199xkp"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + cancerclass = derive2 { name="cancerclass"; version="1.36.0"; sha256="0vk2ayqw5hia97k88g4zbjyc38ck0pay8lbn2hwrhr69lmpwz4zc"; depends=[binom Biobase]; }; + casper = derive2 { name="casper"; version="2.26.0"; sha256="1lhhsw26wqhcj4g2r30wgjhizs63i6mssxlvjxv8a7h6170wazxk"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.36.0"; sha256="1r1r4hvg3z6c1vkhhsh0c5j538z4msvndx6mns3cxdv7fm11zg05"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; + cbaf = derive2 { name="cbaf"; version="1.14.0"; sha256="0q2lr9d64wqy5jjcfw9821wzq1dxqvga2mdgwf6i9lsxdxqvw83r"; depends=[BiocFileCache cgdsr genefilter gplots openxlsx RColorBrewer]; }; + cbpManager = derive2 { name="cbpManager"; version="1.0.2"; sha256="05mb4rzw90dfywlzfva1451kz74ziya945d691lzz3agxd7xnlfs"; depends=[basilisk dplyr DT htmltools jsonlite magrittr plyr rapportools reticulate rintrojs shiny shinyBS shinycssloaders shinydashboard vroom]; }; + ccfindR = derive2 { name="ccfindR"; version="1.12.0"; sha256="1xkx013mv17kyvsgvqbjwy30mf4sasghg6kxka1m7z3jk7l6zx2b"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; + ccmap = derive2 { name="ccmap"; version="1.18.0"; sha256="1v9ynyb35xafycdwngh2k2i3xshap3ibrxm1zssv7v2svl9mvfxa"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; + ccrepe = derive2 { name="ccrepe"; version="1.28.0"; sha256="1dwxp0zlz7jzy8fjj6p58j6skaz3bgcbhky5a69q48d2isx6kqc3"; depends=[infotheo]; }; + ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.4.0"; sha256="1ywm7lbbwr9d6rar8lmlwsxdmwbnam8p1gjlqcz0xlvm125gm5c0"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; }; + celaref = derive2 { name="celaref"; version="1.10.0"; sha256="013dlqscxyzvdp91b90bjiflw2ckcc4nn2h5rnsbqaq9csgppvg5"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; + celda = derive2 { name="celda"; version="1.8.1"; sha256="085ql88sp1dhgkjvakh11vm790bnfmdcp9qc092hncni7x06s35x"; depends=[circlize ComplexHeatmap data_table dbscan DelayedArray digest doParallel enrichR foreach ggplot2 ggrepel gtable Matrix matrixStats MCMCprecision multipanelfigure plyr RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran SingleCellExperiment stringr SummarizedExperiment uwot withr]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.56.0"; sha256="0lvnnhz3zjxpz4cj38pj89z6agvlhi83ivxp14f99c1m5pvwnh4a"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.22.0"; sha256="1yw0aij8p47s65x8qpd6hg2qii4cnga3cm2mzfnjg41ln5m4g0f1"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; + cellbaseR = derive2 { name="cellbaseR"; version="1.16.0"; sha256="0vrl0bdsf5x3anm7y57kaf5vh15flc7f6yb7gp8hcnj6sd44967h"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; + cellity = derive2 { name="cellity"; version="1.20.0"; sha256="1p602bfzmiwfza511g5g7z6x0zscwld99dl1cj6larac3ycjrrw7"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cellmigRation = derive2 { name="cellmigRation"; version="1.0.0"; sha256="1yivxigc9pcsg8r5r4lwg0yabdrvdajpkk8bkwgv2yw33865jmj3"; depends=[doParallel FactoMineR FME foreach Hmisc matrixStats reshape2 sp SpatialTools tiff vioplot]; }; + cellscape = derive2 { name="cellscape"; version="1.16.0"; sha256="1b6ni9846avbs8syipby8smswj7rp6fxqca4lgjxlbsxw2zmnwz3"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; + censcyt = derive2 { name="censcyt"; version="1.0.0"; sha256="1bp392ac9494gbppwjhllqw92l5ifrrc1wjgbkpk7i3mh11zy071"; depends=[BiocParallel broom_mixed diffcyt dirmult dplyr edgeR fitdistrplus lme4 magrittr MASS mice multcomp purrr rlang S4Vectors stringr SummarizedExperiment survival tibble tidyr]; }; + cghMCR = derive2 { name="cghMCR"; version="1.50.0"; sha256="0l95ar1lz06ijqz6wnnlc0za6qfcsnxq6j0mjypgpg3hkin41q4i"; depends=[BiocGenerics CNTools DNAcopy limma]; }; + chimeraviz = derive2 { name="chimeraviz"; version="1.18.0"; sha256="17xn18c2fjc6r1vjr5awhacpg5awy413fif0das8ks2jbcb93jxw"; depends=[AnnotationDbi AnnotationFilter BiocStyle Biostrings checkmate data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; + chipenrich = derive2 { name="chipenrich"; version="2.16.0"; sha256="1qqb3ayckwj9pagvsfcqw5rc3hrhjwsjpc3m5j60gbvnm0hk3fpi"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; + chipseq = derive2 { name="chipseq"; version="1.42.0"; sha256="078p9h0zghlhpd6cr54nww1mk7q97imx8yqfayw5m2yq4097ivbi"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; + chopsticks = derive2 { name="chopsticks"; version="1.58.0"; sha256="10rwb9kg8r50g2qp5rnx16arrx5ia91hyvf988yn3as52ka83q1d"; depends=[survival]; }; + chromDraw = derive2 { name="chromDraw"; version="2.22.0"; sha256="0g8ymy120jssxlgq42zlqllla3c71y9sywdap7vkr9ghfvzl4vv8"; depends=[GenomicRanges Rcpp]; }; + chromPlot = derive2 { name="chromPlot"; version="1.20.0"; sha256="1l4fwv1wyda3xk49izprnv7p8x8z1q7x0zwr5207chwk5s4njcng"; depends=[biomaRt GenomicRanges]; }; + chromVAR = derive2 { name="chromVAR"; version="1.14.0"; sha256="1birmwvcvl2hb5ygbsb3wvbdfayqqs53j1bks46cbkq7ybigfyar"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromstaR = derive2 { name="chromstaR"; version="1.18.0"; sha256="09cqzylci4x4i7wn4ckcqhdlljbzfrp08wdvkkc5vrdldnj9pq5h"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; + chromswitch = derive2 { name="chromswitch"; version="1.14.0"; sha256="15xakwdrb65grpg9fr7sa8v7z1n9x5fsjj28crwjyb34m7br2qgj"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; + cicero = derive2 { name="cicero"; version="1.10.1"; sha256="1y34cm52bv1v2hr7sz8zjzxwd4wng7v75avz5wx45l0ld54z9l10"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; }; + circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.6.0"; sha256="1hif40vfg2lkbyf6abbkxbdm3b1biw6gxnh6ca2sydvi3y5l2ys2"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; }; + cisPath = derive2 { name="cisPath"; version="1.32.0"; sha256="1glhyiy1yibn3a3d23p10b91a9cmzzl1g5b31m4djjiil3qsw389"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.30.0"; sha256="0ibm1fj3dni734ibfzmbdhmr9sarpxfydg4mg95vs2w1rqy55ry3"; depends=[Biostrings BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges seqinr stringr]; }; + cleaver = derive2 { name="cleaver"; version="1.30.0"; sha256="0cw58dhgcrg7nf0rn93fn015c1kfglr4ybhffj51hyg34wd8k4xl"; depends=[Biostrings IRanges S4Vectors]; }; + clippda = derive2 { name="clippda"; version="1.42.0"; sha256="1k9sjgnxk2qg6idcsx9z1wyd24ja507wm7slq6jrvdbslr6ap48i"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; + clipper = derive2 { name="clipper"; version="1.32.0"; sha256="17sfaz2sic0n2qs2d2mj6206y2idhrpm0mqas7bzsi95wj6qhs3x"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; + cliqueMS = derive2 { name="cliqueMS"; version="1.6.0"; sha256="0ian0lqjp6p4lxmxnqk5l5kw2j3h2lff3widz5cfqr71421fn92q"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; }; + clonotypeR = derive2 { name="clonotypeR"; version="1.30.0"; sha256="1siisyqsczjgqp0rm7r9n4j2r52h1g4yi8p7j33w7k8kw4ay03jm"; depends=[]; }; + clst = derive2 { name="clst"; version="1.40.0"; sha256="1lqj36567bahb58naygqhpf09lid0whqma6rilvzg68l6px06nz4"; depends=[lattice ROC]; }; + clstutils = derive2 { name="clstutils"; version="1.40.0"; sha256="0hg9cibl5bqwr6rkflzk1syvb2ixngbzbkhj8am3rw7akcp7g90z"; depends=[ape clst lattice rjson RSQLite]; }; + clustComp = derive2 { name="clustComp"; version="1.20.0"; sha256="18kq0s9cv4b5dy28cg104simyykka6gx9bfb1nhgz4z6ljb65ccn"; depends=[sm]; }; + clusterExperiment = derive2 { name="clusterExperiment"; version="2.12.0"; sha256="1fhmayciwn1m124b4dcs3gzbghgk9f7a7qmjnvvxc958cywcwkx5"; depends=[ape BiocGenerics BiocSingular cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats mbkmeans NMF phylobase pracma RColorBrewer Rcpp S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="4.0.5"; sha256="1dccrl2ffhgmv3iqlmpln7z86ahpf0j9ma194fnknsgi3cd9rhrl"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim magrittr plyr qvalue rlang tidyr yulab_utils]; }; + clusterSeq = derive2 { name="clusterSeq"; version="1.16.0"; sha256="07l7l2s2iha0n6n76j6x913vlzfxmfg9zmgs0qi8hxzy0y2wz8s3"; depends=[baySeq BiocGenerics BiocParallel]; }; + clusterStab = derive2 { name="clusterStab"; version="1.64.0"; sha256="1cra5fjd6sygybfa04af8p01wzl0y5cfx17bias4kdjk0blvgfzx"; depends=[Biobase]; }; + clustifyr = derive2 { name="clustifyr"; version="1.4.0"; sha256="1bj4ar7gnzmzq4jrkrxvgak8fdzjm2208ld9bf7zw716300qwajz"; depends=[cowplot dplyr entropy fgsea ggplot2 httr Matrix matrixStats proxy readr rlang S4Vectors scales SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; }; + cmapR = derive2 { name="cmapR"; version="1.4.0"; sha256="0l0fqkrp5hjw4ggshnjpc8bd5m8m42xzprc0cbb7fm5l8qqyavqa"; depends=[data_table flowCore matrixStats rhdf5 SummarizedExperiment]; }; + cn_farms = derive2 { name="cn.farms"; version="1.40.0"; sha256="1hhh104jwac373vqjsp6fvq7ssqswlx7p53mjm015gv9j58q5z5d"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_mops = derive2 { name="cn.mops"; version="1.38.0"; sha256="178dayy7bjw3gav2g6ngnjncgrp204jgd68pk7x0m4rxagadiz27"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + cnvGSA = derive2 { name="cnvGSA"; version="1.36.0"; sha256="119s8lqcpbvzq4ry0pmsrny2wdvx62c81k7v4ag9x36b8x1m9qyg"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; + coGPS = derive2 { name="coGPS"; version="1.36.0"; sha256="00j1p1rxdhpws9gvwvk2jglzfg23y98k1l5cn24slh0wldbsaa1p"; depends=[]; }; + coMET = derive2 { name="coMET"; version="1.24.0"; sha256="1n9c8hpspb3fyvvcmr88a3iz1f4hpq2z80dmyj5xndl2yz1454b1"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; + coRdon = derive2 { name="coRdon"; version="1.10.0"; sha256="1dsyv4gzd3rm339z3wqxq12cqyy01jfhvyq4r58r84nl4qzss6wl"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; }; + codelink = derive2 { name="codelink"; version="1.60.0"; sha256="14di10nyan870hl0b51aymm455a6z4izncjbh2i7am6k6qgaygna"; depends=[annotate Biobase BiocGenerics limma]; }; + coexnet = derive2 { name="coexnet"; version="1.14.0"; sha256="03a0ja03ribsq4cy89hgzf9vv9afk1bzr9sm0gp8jv7iw9pxicp5"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; + cogena = derive2 { name="cogena"; version="1.26.0"; sha256="0aq69sk4npfa0ycs3y48r4gbfzd1xmhxddyrndvqwa9l5ib7ns67"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; }; + cola = derive2 { name="cola"; version="1.8.1"; sha256="12h5vsahh3hgdxjlgfssqqk0kllrhkza3schbgj0if6lmij23wg0"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest doParallel eulerr foreach GetoptLong GlobalOptions httr impute irlba knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; }; + combi = derive2 { name="combi"; version="1.4.0"; sha256="02zjcgx3km03rjmpkdrj67isp8qk8bl88pfyn3vfbaw9kmlxj003"; depends=[alabama BB Biobase cobs ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.26.0"; sha256="0y80b0vi5jsakp6ba119gj8lc0v4rkk58ikgx6mh8hvh35002mhd"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compartmap = derive2 { name="compartmap"; version="1.10.0"; sha256="10v6fiqnpx7y3clna3q50brxzslyw96x9gwp9sg6k22rdi8pyzf6"; depends=[BiocSingular DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array Matrix RaggedExperiment reshape2 RMTstat rtracklayer scales SummarizedExperiment]; }; + compcodeR = derive2 { name="compcodeR"; version="1.28.0"; sha256="0hl7lj9k9sxrn327fzvf8mkx3mnr041zn6lxcbahfffix6lrpzc5"; depends=[caTools edgeR ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + conclus = derive2 { name="conclus"; version="1.0.0"; sha256="1g7snf1s3kl0g4aikn9ly8igj0fk8qbngzqb5wy665g6jvvacvw5"; depends=[AnnotationDbi Biobase BiocFileCache biomaRt clusterProfiler dbscan doParallel dplyr factoextra foreach fpc GEOquery ggplot2 gridExtra pheatmap Rtsne scales scater scran SingleCellExperiment stringr SummarizedExperiment]; }; + condiments = derive2 { name="condiments"; version="1.0.0"; sha256="0brjjmx1brgx4rwb5wn3aj9209lbz2dpkhz6vrxdbk5v7n2vgbny"; depends=[BiocParallel dplyr Ecume igraph magrittr matrixStats mgcv pbapply RANN SingleCellExperiment slingshot SummarizedExperiment TrajectoryUtils]; }; + consensus = derive2 { name="consensus"; version="1.10.0"; sha256="04brkizq2p7lymd380fdw5x4d6hxh15mplh58pmwz3rh8m3za77z"; depends=[gplots matrixStats RColorBrewer]; }; + consensusDE = derive2 { name="consensusDE"; version="1.10.0"; sha256="0b98zzpskbdcl6lgwmxgs2rr6r6c5y3dxr3wggk8d0g7lmxicg0q"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; + consensusOV = derive2 { name="consensusOV"; version="1.14.0"; sha256="0cjwpcnsp7bajpi481lwp414kksfjd5kairmya20kxi5msf34yxw"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; + consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.20.0"; sha256="14rhi0jq67q88ladi3yycgnxskih11097szlb4gv9gp3rhdvddjd"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.20.0"; sha256="14i3pk84ipg398bs876jqv1fjyaryz0422bj6174jiz4syz2gypq"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + conumee = derive2 { name="conumee"; version="1.26.0"; sha256="0cgf75zsw9wnc735njshanvdhjm5wb2sph80z38fm3q3mikf1w42"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; + convert = derive2 { name="convert"; version="1.68.0"; sha256="0r8vd1as3ci4xn8w3lk1j529lms2zxq7c7m5lcycjyzbjnv7xs03"; depends=[Biobase limma marray]; }; + copa = derive2 { name="copa"; version="1.60.0"; sha256="0pm90l8ky3gcpy2wsai0vlxq84nymywn7f63d7grz7j50v3csqqc"; depends=[Biobase]; }; + copynumber = derive2 { name="copynumber"; version="1.32.0"; sha256="03pvjzjrcsbjfw3855s3whfzin45vaipy7cahnj6fywdysvh8hps"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; + corral = derive2 { name="corral"; version="1.2.0"; sha256="06nkyqz0rp1lbcbak0iyyzzy43qskdljh5v2ld4ggc641pwipl8r"; depends=[ggplot2 ggthemes gridExtra irlba Matrix MultiAssayExperiment pals SingleCellExperiment SummarizedExperiment transport]; }; + coseq = derive2 { name="coseq"; version="1.16.0"; sha256="1ai2y7nrcr61as33bix5pzpfhbxxa0m5lb14kxbgmdjpc2n43mxs"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; + cosmiq = derive2 { name="cosmiq"; version="1.26.0"; sha256="1mj6l1ys69ncykn425iihxixp9yp7r3skhk6fy8jsn3i6zpdsm6d"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + cosmosR = derive2 { name="cosmosR"; version="1.0.1"; sha256="0zsp02h11zmava8bnvncdy2xcq5xxp42b0vpqbhrwkma0z4izzlf"; depends=[AnnotationDbi biomaRt CARNIVAL dorothea dplyr igraph org_Hs_eg_db purrr readr rlang stringr tibble visNetwork]; }; + countsimQC = derive2 { name="countsimQC"; version="1.10.0"; sha256="0kjjxw3n3m25fryafzbi807kcq9jin4fqkjxpfgdqniwwk0vhd1m"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; + covEB = derive2 { name="covEB"; version="1.18.0"; sha256="0cwik99d5k92pmh16fb2l08l863k61xzzcbxadllkwyar8bla727"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; + covRNA = derive2 { name="covRNA"; version="1.18.0"; sha256="1ncncif3vmszi4l3s0y37af7n7py2qy68j9wnksrysz8rfj6lq73"; depends=[ade4 Biobase genefilter]; }; + cpvSNP = derive2 { name="cpvSNP"; version="1.24.0"; sha256="1f4bchxn8xd7mzzdhymwhwc1ay69ak17psrhvgibarphfa68car3"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; + cqn = derive2 { name="cqn"; version="1.38.0"; sha256="1aqyzi6cr681xl7mc1m7a6ni51i5132sisw7gjanbxq2b3czmz25"; depends=[mclust nor1mix preprocessCore quantreg]; }; + crisprseekplus = derive2 { name="crisprseekplus"; version="1.18.0"; sha256="17pvgrkvsyp1klvndz7xzhvd6kwilnf56zv1gx1jk54ildw094yi"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; + crlmm = derive2 { name="crlmm"; version="1.50.0"; sha256="0xd273pjchb0rbykqnn7jwz2bz6qisd7i76gmf8qpzziqdm417p1"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; }; + crossmeta = derive2 { name="crossmeta"; version="1.18.0"; sha256="0p8gmqxsiyc0c9qgwhhvq60m6936ngsx5ijvxy2vwv4chprgmg5c"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager data_table DBI DESeq2 DT edgeR fdrtool GEOquery limma matrixStats metaMA miniUI oligo RColorBrewer RCurl reader readxl RSQLite shiny shinyBS shinyjs shinypanel shinyWidgets statmod stringr SummarizedExperiment sva tibble XML]; }; + csaw = derive2 { name="csaw"; version="1.26.0"; sha256="0br85155fcj2m9hbf7g94j27qp3ldgmf89ahb8mygcvwqj44f127"; depends=[BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicRanges IRanges limma Matrix metapod Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + ctc = derive2 { name="ctc"; version="1.66.0"; sha256="1v8aysvy6a3r1iafc3xvk885c128kb3pb9zpcdhdjcn0by96k8hh"; depends=[amap]; }; + ctgGEM = derive2 { name="ctgGEM"; version="1.4.0"; sha256="04s73n42ch4i2rccq1affglwv4lkajy455pbavrycl27sabi0lz7"; depends=[Biobase BiocGenerics HSMMSingleCell igraph monocle sincell SummarizedExperiment TSCAN]; }; + ctsGE = derive2 { name="ctsGE"; version="1.18.0"; sha256="043qva9njsivp6r2cplaic0idgjf3jxz2js2yxqnj8xr1n8jlhbl"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; + cummeRbund = derive2 { name="cummeRbund"; version="2.34.0"; sha256="1avvmvrmldbscc7xd6a6k22xjykbzafvqf87wh5z9rx3qlzswsjx"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customCMPdb = derive2 { name="customCMPdb"; version="1.2.0"; sha256="0ihmkqz1v6gfbv2v0igwvgi4gygbx997vrh84sx487vap0d62wr7"; depends=[AnnotationHub BiocFileCache ChemmineR rappdirs RSQLite XML]; }; + customProDB = derive2 { name="customProDB"; version="1.32.0"; sha256="0qr3i826vyrhs1kqbavv6hsjj2bgnyv63nn9xdiqsakh2xbgzrph"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; + cyanoFilter = derive2 { name="cyanoFilter"; version="1.0.0"; sha256="05wfksk5vkfd46fh0nrlsfn9c53728jy6h037z45fvnl8jy7f9kf"; depends=[Biobase flowCore flowDensity GGally ggplot2]; }; + cycle = derive2 { name="cycle"; version="1.46.0"; sha256="00p21wzhk6pc3avgd2z2r7kabsg7i1m08nbnh2f3djz8sdnqychr"; depends=[Biobase Mfuzz]; }; + cydar = derive2 { name="cydar"; version="1.16.0"; sha256="0ih9mxbpyvfqgk06qb61i1v0sv0j8zfkbikp7630p3ib4g9i53xm"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; + cytolib = derive2 { name="cytolib"; version="2.4.0"; sha256="0wl7zqwv0i38dfzqfsz40n3mcbxi38ffn1rbd5pm9s7hq16zr4nv"; depends=[BH Rcpp RcppArmadillo RcppParallel Rhdf5lib RProtoBufLib]; }; + cytomapper = derive2 { name="cytomapper"; version="1.4.1"; sha256="0gl4slw5x54gz27y5rcrlddhym4lw6jbpi1pvdi5f261nl2symjk"; depends=[BiocParallel DelayedArray EBImage ggbeeswarm ggplot2 HDF5Array matrixStats raster RColorBrewer rhdf5 S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment svglite svgPanZoom viridis]; }; + daMA = derive2 { name="daMA"; version="1.64.0"; sha256="1aqgxzr323hkvh6d3b130xqhkzmz7awmwwdq85hgmyvywwyjk1qz"; depends=[MASS]; }; + dada2 = derive2 { name="dada2"; version="1.20.0"; sha256="1wb9knxyiv21q8iia72k173qilw55s7i4sc8l1r3s9rg5k7jy945"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; + dagLogo = derive2 { name="dagLogo"; version="1.30.0"; sha256="10bcs0bd1ba418a0jnfnxsfjm0678rq475c75ih24xb1ws54yv1a"; depends=[BiocGenerics biomaRt Biostrings motifStack pheatmap UniProt_ws]; }; + dasper = derive2 { name="dasper"; version="1.2.0"; sha256="1zs0v6yqrg2cd5qvpbcwa7g7zc31skj8gwgjxyzg3kj4nvmfpfmw"; depends=[basilisk BiocFileCache BiocParallel data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges magrittr megadepth plyranges readr reticulate S4Vectors stringr SummarizedExperiment tidyr]; }; + dcGSA = derive2 { name="dcGSA"; version="1.20.0"; sha256="183r6sjl4y0x1wyh3fbaxvxl447vjig06m7k0wq6shqhfgca96ag"; depends=[BiocParallel Matrix]; }; + dcanr = derive2 { name="dcanr"; version="1.8.0"; sha256="1bmqcap8kiiprgcpszfn2fsqnkq5142pydg5vdm139qmhjci74cn"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; }; + dce = derive2 { name="dce"; version="1.0.0"; sha256="1wzx7wsk1wq142br7jl2pd49mqg542dgh3zfsqilal2zpdmdi9iv"; depends=[assertthat CombinePValue dplyr edgeR epiNEM expm ggplot2 ggraph glm2 glue graph graphite harmonicmeanp igraph logger MASS Matrix metap mnem naturalsort org_Hs_eg_db pcalg ppcor purrr reshape2 Rgraphviz rlang tidygraph tidyverse]; }; + ddCt = derive2 { name="ddCt"; version="1.48.0"; sha256="1d18bw80s9lhcvvprll1wihybr9z3m3brza2nw4gjlaihpf7ldab"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddPCRclust = derive2 { name="ddPCRclust"; version="1.12.0"; sha256="093xrvrrxsh34w4w4ji9kcgxrz9wkjriy6y7azhyq5d5z9r7yab7"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; + dearseq = derive2 { name="dearseq"; version="1.4.0"; sha256="1cg6lk9nll9h549d1s5126z4rc4zdawzfzqi2b18js8lml4ihzsj"; depends=[CompQuadForm ggplot2 KernSmooth matrixStats pbapply statmod]; }; + debCAM = derive2 { name="debCAM"; version="1.10.0"; sha256="14n2pn0r7j7vn0rns7y56kzzvw4db9b15543diqli8xy2xdm7wnz"; depends=[apcluster Biobase BiocParallel corpcor DMwR2 geometry NMF nnls pcaPP rJava SummarizedExperiment]; }; + debrowser = derive2 { name="debrowser"; version="1.20.1"; sha256="0w96bix0iv38r9qrznlg47rvrd7cd36di9j08vmp0dn50zcsxm6d"; depends=[annotate AnnotationDbi apeglm ashr clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; }; + deco = derive2 { name="deco"; version="1.8.0"; sha256="1bsmx5jblfgd12w6kvf7bb1zixyh3sb0zkjw54ar39yjfk86nyw8"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; }; + decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.8.0"; sha256="1bq42fipc6ahldcdba9yfk7m851y2jrf62k43jhwrffacrl9h2s9"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog readxl S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + decontam = derive2 { name="decontam"; version="1.12.0"; sha256="1ynncsv2rny05696h5qpnb03wpfx0lhcs5b6fj7kijqfpfghbfza"; depends=[ggplot2 reshape2]; }; + decoupleR = derive2 { name="decoupleR"; version="1.0.0"; sha256="1i3y0l2sjmp60bd40qx57qf52w1dw0151m3kqmrmgv5pbbdc6ik5"; depends=[broom dplyr GSVA magrittr Matrix purrr rlang speedglm stringr tibble tidyr tidyselect viper withr]; }; + deepSNV = derive2 { name="deepSNV"; version="1.38.0"; sha256="0zz56hf417m7bgg2g2wpbaik30pi6h2nam1n5bviqgdn4mv8n0bs"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.6.0"; sha256="1kpya8zzvivpmv1q3wqi8apr1hm6niwc5ibkggsbb5r5887s5fp2"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.32.0"; sha256="12lam0xfshqp214xls7j29qyqizirdmd3lnanpr6cgij0k6dc5yn"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + densvis = derive2 { name="densvis"; version="1.2.0"; sha256="0lnrb4j22nyyk1hv0imj1pci5kg2xrqql323n0p11b5i5n5054nq"; depends=[assertthat basilisk Rcpp reticulate]; }; + derfinder = derive2 { name="derfinder"; version="1.26.0"; sha256="1bqzm3zcq4nhngxdfdp7sahylx77g5xwdiqbidxycs2y1p75842v"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.26.0"; sha256="1w5dxsfx3lspl7qiijf6xbm9y2zzrcb8kfvhkwykcf6b98avrz5b"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.26.0"; sha256="04agszbqbr39898q3dbdx4shgbb162h92ipzv17k7gs880cpxm2l"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; }; + diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.74.0"; sha256="1vll26w3vj8f4nhshx7z1pdpf3xsbakspdgfczm6ngc80gi6nc10"; depends=[minpack_lm]; }; + diffHic = derive2 { name="diffHic"; version="1.24.1"; sha256="08df9rvk5rzfjwmzqsa57p3jbyg8gpp5fg5rv0lzdln22sp7jk6c"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; + diffUTR = derive2 { name="diffUTR"; version="1.0.0"; sha256="134h5p216biqvgkcmr5mk0r70b1nn798cmd0v40clx9bxicjfjpn"; depends=[ComplexHeatmap DEXSeq dplyr edgeR ensembldb GenomeInfoDb GenomicRanges ggplot2 ggrepel IRanges limma matrixStats Rsubread rtracklayer S4Vectors stringi SummarizedExperiment viridisLite]; }; + diffcoexp = derive2 { name="diffcoexp"; version="1.12.0"; sha256="06b8nx6asrfikhmndkan5pvag0p7a948dl7v52rmiihzb2v54wn8"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; + diffcyt = derive2 { name="diffcyt"; version="1.12.0"; sha256="08k1i2pp8naxr3znay4x2zilc3x6xdda1155wxjyjwv58qgh23z3"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; + diffloop = derive2 { name="diffloop"; version="1.20.0"; sha256="0kaagnlw5z5dc70f83hrp8d3hb6dzzsgbkb6q5b3ks9halm60cd3"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; + diffuStats = derive2 { name="diffuStats"; version="1.12.0"; sha256="00lp6ck0znhdj2vy0qxl6vvjzyz3nn0v3qsn59jgcffk2l31dksy"; depends=[checkmate expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; + diggit = derive2 { name="diggit"; version="1.24.0"; sha256="03vj91njfkr5nhiqwm7v3j1aq6ba2cbi9mg7acmpawafd8ngjfk9"; depends=[Biobase ks viper]; }; + dir_expiry = derive2 { name="dir.expiry"; version="1.0.0"; sha256="05mk7iwzay1xrgvssbz7nyl5d1n03syalbk18lmjmbx05dy0cjik"; depends=[filelock]; }; + discordant = derive2 { name="discordant"; version="1.16.0"; sha256="17an31wai4nk5jxip9h8k4jv20wpd97c1jzcy8bcyfkz4w5yywwv"; depends=[Biobase biwt gtools MASS]; }; + distinct = derive2 { name="distinct"; version="1.4.1"; sha256="0yi3l990fk21ilrfkipdgzqvr9kl3a67xsad10f929gw0zpplxy7"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo scater SingleCellExperiment SummarizedExperiment]; }; + dittoSeq = derive2 { name="dittoSeq"; version="1.4.2"; sha256="1wyn7p7k1rasjxhi4sfgn0ddxhikp21svkglaxy41w30b3b1b9cb"; depends=[colorspace cowplot ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + divergence = derive2 { name="divergence"; version="1.8.0"; sha256="1lg7bz9pqsnn8h69fh30xmsynp47dg407kifdfq0kq6rxj38gwrf"; depends=[SummarizedExperiment]; }; + dks = derive2 { name="dks"; version="1.38.0"; sha256="134jqcd9b0yg8in77g8wjvb8wqm5w4vfqh93hp05w95pjxks7d57"; depends=[cubature]; }; + dmrseq = derive2 { name="dmrseq"; version="1.12.0"; sha256="1jbbjifjsnk9261wqmdwkbzj1w52g6vaanpk4w816ri0fap587m4"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.20.0"; sha256="1yrxrdz4nplpx7ljz6662mc6s0vspmy5n91rb71q4iy9qpbkw5i0"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; + doseR = derive2 { name="doseR"; version="1.8.0"; sha256="0hw0p070scagl3fimfh0wq1k4hlbmw429yh2sgi5dyq2c0ml19i9"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; }; + dpeak = derive2 { name="dpeak"; version="1.4.0"; sha256="07hmlbwkbaj12ba0kmi0dnnzsbj7l36biajrbml483rsxsxiqkfi"; depends=[BSgenome IRanges MASS Rcpp]; }; + drawProteins = derive2 { name="drawProteins"; version="1.12.0"; sha256="00acjvxxf2vhab7km2pqjzlkw23yby92a0xrhl2hr2qr6miy3y2g"; depends=[dplyr ggplot2 httr readr tidyr]; }; + drugTargetInteractions = derive2 { name="drugTargetInteractions"; version="1.0.2"; sha256="19c6shb0js0dzxfqraycxj9pqdxlyh7qy4hw3yklz9rln6dr1k0c"; depends=[AnnotationFilter BiocFileCache biomaRt dplyr ensembldb rappdirs RSQLite S4Vectors UniProt_ws]; }; + dualKS = derive2 { name="dualKS"; version="1.52.0"; sha256="13wdb5qmbm6zbf1930x30qvkqb73v28ww3z0nq4n93ghyyl0hidb"; depends=[affy Biobase]; }; + dupRadar = derive2 { name="dupRadar"; version="1.22.0"; sha256="1gxxjmr97r2qn356r55yqzp0kzgy7k67ikb2m9fvzfsbf5mcwkna"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.52.0"; sha256="0a6wwl3018lsridj5nc9s7zc31dv7mja88rgsv5fd35ipwl27avm"; depends=[Biobase marray]; }; + easyRNASeq = derive2 { name="easyRNASeq"; version="2.28.0"; sha256="1aqka9kawyhl6hl7c01dfsrwpmpqmkx3gh06ciqh11f0nq9xascb"; depends=[Biobase BiocFileCache BiocGenerics BiocParallel biomaRt Biostrings edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD rappdirs Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; + easyreporting = derive2 { name="easyreporting"; version="1.4.0"; sha256="037ih62gx8drg5y97fkk451wwjyjkpiff5r705nrdjfzisrp63rd"; depends=[rlang rmarkdown shiny]; }; + ecolitk = derive2 { name="ecolitk"; version="1.64.0"; sha256="189yc8kkz5916z28q2wxxjsfl8qpw2j8wla686kr764ah2mhdsi8"; depends=[Biobase]; }; + edge = derive2 { name="edge"; version="2.24.0"; sha256="1n1nk7fba7612bk3581ja8grrgllnd81lg3lh1p7nw92n1gzsqsg"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.34.1"; sha256="0f6apsjq6cn794840ls9y2n0hix1gyhvkdgxch1v22qr4sq0c86k"; depends=[limma locfit Rcpp]; }; + eegc = derive2 { name="eegc"; version="1.18.0"; sha256="0c9farjrzprqv120ivx3lax70zaimzid70my5d7020da01lg1y02"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; + eiR = derive2 { name="eiR"; version="1.32.0"; sha256="1gz78xw3cwbb03s02gr5lzghnvx19afxw3ylk0ijm4qhfqbw7m0c"; depends=[BiocGenerics ChemmineR DBI digest RcppAnnoy RCurl RUnit snow snowfall]; }; + eisaR = derive2 { name="eisaR"; version="1.4.0"; sha256="198x3h2r4hicad2dz892z8rknn3jwk4qskl3m7a6pqf5swqhsg5c"; depends=[BiocGenerics edgeR GenomicRanges IRanges limma S4Vectors SummarizedExperiment]; }; + enrichTF = derive2 { name="enrichTF"; version="1.8.0"; sha256="0kbrhd98pdx0xd6zninipmly2i4zax5vwldw0mmxp6ipbgwcv54y"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; }; + enrichplot = derive2 { name="enrichplot"; version="1.12.2"; sha256="194sfmcnjfi3fvvfpljg1f80f44vvvxiij336b8z1dgzki6bqa3r"; depends=[cowplot DOSE ggplot2 ggraph ggtree GOSemSim igraph magrittr plyr purrr RColorBrewer reshape2 scatterpie shadowtext]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.34.0"; sha256="0zg5g7hvi965mbxxqkxli1pbk88yz9a3bfgmdjawh5blfznmyqw5"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="2.16.4"; sha256="15yllkxr6sj5pfvkvv285nk3q5374nzq1iz8ywmnrq910k3xagd8"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; + epiNEM = derive2 { name="epiNEM"; version="1.16.0"; sha256="0dw998b5mgf20wzwgvq4xv6sw47jv96wa266ldg6z9m8s4cl0mr2"; depends=[BoolNet e1071 graph gtools igraph latex2exp lattice latticeExtra minet mnem pcalg RColorBrewer]; }; + epialleleR = derive2 { name="epialleleR"; version="1.0.0"; sha256="114ymmcxhpj4nqrgk3962mc6skb580hpchqsci6kq81h2lq0yl6v"; depends=[BH BiocGenerics data_table GenomeInfoDb GenomicRanges Rcpp Rsamtools stringi SummarizedExperiment VariantAnnotation]; }; + epidecodeR = derive2 { name="epidecodeR"; version="1.0.2"; sha256="08h6pdnyamxn6m1ps7abl2wkjj1m58gjm0718zpj6452yrrjaa6g"; depends=[dplyr EnvStats GenomicRanges ggplot2 ggpubr IRanges rstatix rtracklayer]; }; + epigenomix = derive2 { name="epigenomix"; version="1.32.0"; sha256="08hdlrz9i6xkb076nvv8gz0i6hjfklrlyln9d7fzhnfi5vpmyyn8"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; + epigraHMM = derive2 { name="epigraHMM"; version="1.0.4"; sha256="1wmdcprgz11jfkw0ybygpv7rfhs0dsmmq42g72pyska0hl81mw6j"; depends=[bamsignals csaw data_table GenomeInfoDb GenomicRanges ggplot2 ggpubr GreyListChIP IRanges limma magrittr MASS Matrix pheatmap Rcpp RcppArmadillo rhdf5 Rhdf5lib Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; }; + epihet = derive2 { name="epihet"; version="1.8.0"; sha256="02xnmxwhm0l2m8mxnfgv1d8mlmyy1pjlspglq88pnbyr0kr0zcyy"; depends=[data_table doParallel EntropyExplorer foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; }; + epivizr = derive2 { name="epivizr"; version="2.22.0"; sha256="08qk680pn89whc5vbnrq6ras51sygccnqnlixvyijxid0gbzfp8h"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + epivizrChart = derive2 { name="epivizrChart"; version="1.14.0"; sha256="19gighqj05cbn7jj9mfqxi578al4ig2562gcsfh1l7cskvkvv85s"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; + epivizrData = derive2 { name="epivizrData"; version="1.20.0"; sha256="17f8yy7m3d8abvzhrb5v9zmw2ka77a4da63f1ma8zia3dfy9cdzz"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.20.0"; sha256="19ymagvlglg4pv4y67sgs0j4dq6gqr0f6ha7g3dawnm7mvk6fv18"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.20.0"; sha256="1sfnc2h801lzqxkr4i4ssn0lqjs7w9yl8zcqg3mz1swymnbzy13z"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.26.0"; sha256="1pz757q41j6fgcb4asja9j6s9a2bfnfs456nssacw5d68fbj5fk1"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="1.8.0"; sha256="02a9702sasgighwb0f9ii8n30ngfx1hjnppaay1f5zsigr8vqalz"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; + esATAC = derive2 { name="esATAC"; version="1.14.0"; sha256="0cwx61068r2bfbmn79j5fawyjanj58xp6pzdz5hqjvwfbn7g4dvs"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; + escape = derive2 { name="escape"; version="1.2.0"; sha256="0rj6943c0ff2lp1g0fq1xawzsd3kbhyd1wp8minrcaw92biy5wik"; depends=[BiocParallel dplyr ggplot2 ggridges GSEABase GSVA limma Matrix msigdbr SingleCellExperiment]; }; + esetVis = derive2 { name="esetVis"; version="1.18.0"; sha256="18bjx8gxjsn3snha0s55w2pgaiv78hllris070cai3qjj579iczr"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; + eudysbiome = derive2 { name="eudysbiome"; version="1.22.0"; sha256="0kv614zvpp00fp0g0myrcamw2cx90h3hmq418jcapzybadi3i0ag"; depends=[Biostrings plyr R_utils Rsamtools]; }; + evaluomeR = derive2 { name="evaluomeR"; version="1.8.0"; sha256="10cnj9igaws0cw9739z7ngmphln8fw8ziafczdwl70fd0hr97k3l"; depends=[class cluster corrplot flexmix fpc ggdendro ggplot2 kableExtra MASS matrixStats mclust MultiAssayExperiment plotrix prabclus randomForest Rdpack reshape2 SummarizedExperiment]; }; + exomeCopy = derive2 { name="exomeCopy"; version="1.38.0"; sha256="16bnydbfrrp7xqcg0krdzbcf7pw5y1r9lc7hl611lvvms2fva29q"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; + exomePeak2 = derive2 { name="exomePeak2"; version="1.4.2"; sha256="08zr4q7zcfwy18dryar5di4qdjmnsiypll660i20wiq4z2l03646"; depends=[apeglm Biobase BiocGenerics BiocParallel Biostrings BSgenome cqn DESeq2 genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges mclust reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + fCCAC = derive2 { name="fCCAC"; version="1.18.0"; sha256="12ijks6hz63ys4z98ky1bqwjraz9f98cqllw2w6w3q8jjg6i9c2n"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; + fCI = derive2 { name="fCI"; version="1.22.0"; sha256="0hp6r8ihwrwgp26sbx8awvrwilsqipjsgi6331gjzl6nypd3zcjx"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fabia = derive2 { name="fabia"; version="2.38.0"; sha256="1v68835z39hsd34vaa07n2kwhrps6mdppxhhbz637lab2pr4h13r"; depends=[Biobase]; }; + factDesign = derive2 { name="factDesign"; version="1.68.0"; sha256="0qavr5kmg8jlr6gqr31hf371zyzs3fpxvbz5bmla2mwx1c66ih2r"; depends=[Biobase]; }; + famat = derive2 { name="famat"; version="1.1.1"; sha256="1sby916vs12vwvnjf6ap0cgb5fmmkzg8j3ldiibfgrm17x8x4gmm"; depends=[clusterProfiler dplyr DT GO_db gprofiler2 KEGGREST magrittr MPINet ontologyIndex org_Hs_eg_db plotly reactome_db rWikiPathways shiny shinyBS shinydashboard stringr tidyr]; }; + farms = derive2 { name="farms"; version="1.44.0"; sha256="1zrkdg64kljyi8kvdicimlzmanjyn365lfncyndv4zlqj1majpf9"; depends=[affy Biobase MASS]; }; + fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.28.0"; sha256="0hznf9408ppqqp5ykwjn36dcvn2wjd4101fqab49zba7hwycf6vs"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; }; + fastseg = derive2 { name="fastseg"; version="1.38.0"; sha256="006v7qs707xmnr35b7rw135pyvacrmhv55a3c53birkpsrjgkps0"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; }; + fcScan = derive2 { name="fcScan"; version="1.6.0"; sha256="10fcz741dr3wbb9f63qywlrays4cnvfnsm6yw4bmkrwk6ccijg8h"; depends=[GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; }; + fcoex = derive2 { name="fcoex"; version="1.6.0"; sha256="1l1bayciavk65my8h1lfhhlrjivr0ja6xsxzm6hfg16dsgjm1hz8"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph Matrix network pathwayPCA progress scales SingleCellExperiment sna stringr]; }; + fdrame = derive2 { name="fdrame"; version="1.64.0"; sha256="1w72bzswb275hr0pyha230301grqifvkacfbffikhadhsivi3yg6"; depends=[]; }; + fedup = derive2 { name="fedup"; version="1.0.0"; sha256="0dzmxj8ch2r4njpd3hd20i0ai4095dj1bl99z2gn7yjz58zh3n70"; depends=[data_table dplyr forcats ggplot2 ggthemes openxlsx RColorBrewer RCy3 tibble]; }; + ffpe = derive2 { name="ffpe"; version="1.36.0"; sha256="0zsq6cxy7bwki8n3sk42jl3h2sh1cq2yzhlcvnhdnn3jx7zylfx4"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; }; + fgga = derive2 { name="fgga"; version="1.0.0"; sha256="13cm7mqcy65yy54bp1rq0cp38nd1cczkpfxr0iiw0qizp0iwpxnj"; depends=[BiocFileCache curl e1071 graph gRbase jsonlite RBGL]; }; + fgsea = derive2 { name="fgsea"; version="1.18.0"; sha256="1mhdgy46nxgv7v54bk9bqfy0vgjzl1law7zy718swdd762xn6g9d"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; + fishpond = derive2 { name="fishpond"; version="1.8.0"; sha256="1x1pkdv2brnlkxdl7q01xy01pxc9ay9rsacsagw421q2mqbcv0sx"; depends=[abind gtools Matrix matrixStats qvalue Rcpp S4Vectors SummarizedExperiment svMisc]; }; + flagme = derive2 { name="flagme"; version="1.48.0"; sha256="1p647d2hr09ib16gm73x9g2wirlw7xxmb0fr92yb3gagn0rk32vw"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; + flowAI = derive2 { name="flowAI"; version="1.22.0"; sha256="0js02yx54pqinsks25p9fcd917952s51l6d32539in2q1dwdfh49"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; + flowBeads = derive2 { name="flowBeads"; version="1.30.0"; sha256="1qdzlpnyvq0vdpa7jj781xii75h9minzllr196kgkkbrvfa668sx"; depends=[Biobase flowCore knitr rrcov xtable]; }; + flowBin = derive2 { name="flowBin"; version="1.28.0"; sha256="0lakff548jpgzm78s0090lkg29rdx5lzjh6088hfy5lmb9b0rbb9"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; + flowCHIC = derive2 { name="flowCHIC"; version="1.26.0"; sha256="144ga5jm2gw9nhva0gfivhdsp5ykiw24ijgh3gl3cd76rpd9bnwm"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; + flowCL = derive2 { name="flowCL"; version="1.30.0"; sha256="1py230dl5cckg7gigd9xyjvcalaxxlzc2d43w7iz6srkv6bjsdn1"; depends=[graph Rgraphviz SPARQL]; }; + flowClean = derive2 { name="flowClean"; version="1.30.0"; sha256="0ddg9f8kh7yz822fhil9ywsy25v6az2qb78c7g72ppmx49faj6fs"; depends=[bit changepoint flowCore sfsmisc]; }; + flowClust = derive2 { name="flowClust"; version="3.30.0"; sha256="03xsmprrkxwkaksjlaxwp54mqfb3zlg6dbqhp87w78fwscisv76b"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; + flowCore = derive2 { name="flowCore"; version="2.4.0"; sha256="13xpbkxi53rxmhvpdiy6bydmhicmxd2gi96d9c1qx4lkss2f14nc"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp RcppArmadillo RProtoBufLib S4Vectors]; }; + flowCut = derive2 { name="flowCut"; version="1.2.0"; sha256="140jch6s2c2lg5h464j2yprv2xipdrss1gixra2yb9g65hdjqy1c"; depends=[Cairo e1071 flowCore flowDensity]; }; + flowCyBar = derive2 { name="flowCyBar"; version="1.28.0"; sha256="0qcb9nd24hjvm792w3g0cjx9mwcfkz91yf49g66m7fkbkbwym6ml"; depends=[gplots vegan]; }; + flowDensity = derive2 { name="flowDensity"; version="1.26.0"; sha256="1axl2f7gwi2swaqkagl8fykb4fx14c8cp1fc8679yp52k3mzai5q"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; }; + flowFP = derive2 { name="flowFP"; version="1.50.0"; sha256="0agz3p35gq2ax703mpmjccfym6d61ywjka58df57gbk3f41hd03r"; depends=[Biobase BiocGenerics flowCore flowViz]; }; + flowGraph = derive2 { name="flowGraph"; version="1.0.0"; sha256="19c97r9cqc61jnf1kcfbcnnkjmnq5a1cw7l0vwrjyin5xy5i0088"; depends=[data_table effsize furrr future ggiraph ggplot2 ggrepel gridExtra htmlwidgets igraph Matrix matrixStats purrr Rdpack stringi stringr visNetwork]; }; + flowMap = derive2 { name="flowMap"; version="1.30.0"; sha256="187lz2akz31r2h52b7b9rmqfdjlhrpvh5539nl68r6rnxsakq1gz"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.28.0"; sha256="10c2harls0r0jnz4hiisl08pm19k3rqx9ci2zdh4827vwgcxs5pa"; depends=[Biobase flowCore Rcpp]; }; + flowMeans = derive2 { name="flowMeans"; version="1.52.0"; sha256="1awskkq48qhv4v9glxgfqi0kgwqd62fbj641k4vvxfcwsf2c7bfg"; depends=[Biobase feature flowCore rrcov]; }; + flowMerge = derive2 { name="flowMerge"; version="2.40.0"; sha256="1ailbfy8rvpsvz7rr7dqp3yfa836nng6ihgxcvdifwj3l5fih6ib"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.38.0"; sha256="16p5yxgb2hblxzwk2qsa2z191wzz5dnvbg0a4wrhi25hy144b225"; depends=[]; }; + flowPloidy = derive2 { name="flowPloidy"; version="1.18.0"; sha256="14y0fxa4d653k3izf7y21k2jiz3byx3xc6pckycxp38lvm44yz87"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; + flowPlots = derive2 { name="flowPlots"; version="1.40.0"; sha256="15arica3hk5mlk3jvk376nrivq31z4amy8ggn6k0mm834gaxgnwn"; depends=[]; }; + flowSpecs = derive2 { name="flowSpecs"; version="1.6.0"; sha256="0a3cd0sv8jf36147vz6vi24m07c92m31vf62bhihad86ic9kp07y"; depends=[Biobase BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; }; + flowStats = derive2 { name="flowStats"; version="4.4.0"; sha256="1yr5m7qmhmm52c70z3d0zy4zgf0hja7r2ig9yljv5w86bzm962x6"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer rrcov]; }; + flowTime = derive2 { name="flowTime"; version="1.16.1"; sha256="04a43h0vc5gdfafrm57y5x7wxv7sr1javwl713w4zvajgcd3sbjr"; depends=[dplyr flowCore magrittr plyr rlang tibble]; }; + flowTrans = derive2 { name="flowTrans"; version="1.44.0"; sha256="0ldbsn3d4riiidgf2k8vcq4k7s5ywc9lxw7kywnhvqhjqywfwn84"; depends=[flowClust flowCore flowViz]; }; + flowUtils = derive2 { name="flowUtils"; version="1.56.0"; sha256="1sdwgyvrsz0pp60zdfrcgb7bs8s87j7257p8ck813ydizc324x9w"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowVS = derive2 { name="flowVS"; version="1.24.0"; sha256="0rh01h5d4skbvbfs4x42xmp1cp5q9higkwh92v0zdzpb85kcc30b"; depends=[flowCore flowStats flowViz]; }; + flowViz = derive2 { name="flowViz"; version="1.56.0"; sha256="17x04xwyw2pp5zkhgvrmxkb8cbrv9wql6xhjsfpq0n6yd9dxqc1v"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="4.4.0"; sha256="1a9qb2dcvwgb3z0vdbbzn1rzy77d3da72kirs272344hdx9b2cx9"; depends=[aws_s3 aws_signature BH Biobase BiocGenerics cytolib data_table DelayedArray digest dplyr flowCore ggplot2 graph lattice latticeExtra matrixStats ncdfFlow RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib S4Vectors scales XML]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.26.0"; sha256="17vkbj2pzc5pqy07c6ygc4akklnaclxb3m1fl8kl162qb13wj1d8"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; + fmcsR = derive2 { name="fmcsR"; version="1.34.0"; sha256="10nksgl34hrsjq7z4fbf3wbk5gsvsv81l0afh6r9dlxz86kixypd"; depends=[BiocGenerics ChemmineR RUnit]; }; + fmrs = derive2 { name="fmrs"; version="1.2.0"; sha256="06ysjavwmxg4mqplsyvhw17v3a0fjz5c3zsz8qm3jmmj7a8wan73"; depends=[survival]; }; + fobitools = derive2 { name="fobitools"; version="1.0.0"; sha256="05i09412dh62s8cp26j6q9xa9nkigyqzqx2v9vpgq4498bs9qzwy"; depends=[clisymbols crayon dplyr fgsea ggplot2 ggraph magrittr ontologyIndex purrr RecordLinkage stringr textclean tictoc tidygraph tidyr vroom]; }; + frenchFISH = derive2 { name="frenchFISH"; version="1.4.0"; sha256="1l2g3j3q83ir471zfayjq3d36gg6jsh9v2cg3jlhr1x3k6w0rwx9"; depends=[MCMCpack NHPoisson]; }; + frma = derive2 { name="frma"; version="1.44.0"; sha256="1p28w134jkg0bvb3a5dx89lggx8jhladv7q04lpmfzwsm00304p7"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; + frmaTools = derive2 { name="frmaTools"; version="1.44.0"; sha256="0z9x0k3kc2944k8p2ybs0ilc3gh71lblw1lr75rrdhy2xlkg9shs"; depends=[affy Biobase DBI preprocessCore]; }; + funtooNorm = derive2 { name="funtooNorm"; version="1.16.0"; sha256="03v9l27sbx4bzgdss7b384q1qgaqm07mna88w7qkj8lahc68a0r5"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; + gCrisprTools = derive2 { name="gCrisprTools"; version="1.20.0"; sha256="0rr2mnnf580g484mrsijnzr9zyv6sy2kacpsqqjknkgz0px800w5"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg SummarizedExperiment]; }; + gaga = derive2 { name="gaga"; version="2.38.0"; sha256="1wygnl8xid27xdbfmhiqw3y6fdbszdm8v4jid9xr6xy47yn6bfla"; depends=[Biobase coda EBarrays mgcv]; }; + gage = derive2 { name="gage"; version="2.42.0"; sha256="0z7hrwdm6my6p7z04bcpfhqk72pd0s1bdzvsiiym59qj79fbvb83"; depends=[AnnotationDbi GO_db graph KEGGREST]; }; + gaggle = derive2 { name="gaggle"; version="1.60.0"; sha256="0rz243xv7wp3ihsfxf856bli2gb1ngrbr56kd6m6rm2nkzpgzdb0"; depends=[graph rJava RUnit]; }; + gaia = derive2 { name="gaia"; version="2.36.0"; sha256="0pflv2qv44yzbxiq37is5prvx69hnj3rn0r3m306gz05cphw8gww"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.20.0"; sha256="1wmgzlhqb4ay9mcfwgcqvzsz4ahmik065i72ha1xc49jzn5155lc"; depends=[]; }; + gcapc = derive2 { name="gcapc"; version="1.16.0"; sha256="05lfx1zdw60ngr6vi2nd9sxpws2fgpy5q5i8nj2633gg5xag7kca"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; + gcatest = derive2 { name="gcatest"; version="1.22.0"; sha256="09lf136skwib4vygsg3h6svcj13m7w13517bnwsng1fj6a66yzbd"; depends=[lfa]; }; + gcrma = derive2 { name="gcrma"; version="2.64.0"; sha256="1z4abw9s2hs3csnx25nli7fpvb3rh3l0swzl0wfqp087fcs78pxi"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.28.1"; sha256="1w3z718q3bhh8bp71va9pbcd62pwbvgjw33ffg960jya40xssvc7"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.32.0"; sha256="1i1cavbbvxzqgqxfmikghnls18jrq12hb953mjrwa95lkhzdxm2d"; depends=[Biobase e1071 EBarrays minet]; }; + gemini = derive2 { name="gemini"; version="1.6.0"; sha256="1y7j9cygrkw8a69rvfl5v5vwfchfx477cr5jnmvdi65xff6sv6v5"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; }; + genArise = derive2 { name="genArise"; version="1.68.0"; sha256="013ipji3kq79vxqd15vgl6akrigk2nk2d8bjaz0krci0v7f3mzn1"; depends=[locfit tkrplot xtable]; }; + genbankr = derive2 { name="genbankr"; version="1.20.0"; sha256="1ycmk5qhp1dvbrffqd08pmq5vnc6jywrdkw3g44dmqa00hwy3lbi"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + geneAttribution = derive2 { name="geneAttribution"; version="1.18.0"; sha256="1sfhcdzafhc40iwj58i3vbivkpq4avjliwkbqjz0j7ps905q0n9q"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; + geneClassifiers = derive2 { name="geneClassifiers"; version="1.16.0"; sha256="1lac0v7mrwrf6m5knb7wgv001n60ajssz5jhwxrh6qrdm1xjkjfm"; depends=[Biobase BiocGenerics]; }; + geneRecommender = derive2 { name="geneRecommender"; version="1.64.0"; sha256="0rbnb09l3nyci962hl5i8m4fsiy97nngyg3ficlk4pihsx0bwwz8"; depends=[Biobase]; }; + geneRxCluster = derive2 { name="geneRxCluster"; version="1.28.0"; sha256="0vqwbp8b74a33dhbdkisn8nhvprxsi9pqgw92f0s7j367313qljz"; depends=[GenomicRanges IRanges]; }; + geneXtendeR = derive2 { name="geneXtendeR"; version="1.18.0"; sha256="1gqpcibv9mscxna1h8kkl7shw4gvs2z0jrrg18hrjx918pq6wifb"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; + genefilter = derive2 { name="genefilter"; version="1.74.0"; sha256="0dy9pmlb0pc9b4ks5fb9zgnmhc9f2mkqmsdlb7f5z88xmj68y4qk"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; }; + genefu = derive2 { name="genefu"; version="2.24.2"; sha256="06nak5izjacr9708d134m6y7fnnhy7pylgjl843zdz9cqw5qnjch"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; }; + geneplast = derive2 { name="geneplast"; version="1.18.0"; sha256="1lfwj7xhkk8gi1arr5mf38s44gb6j450ai5ir83y5m7mw6s0vphb"; depends=[ape data_table igraph snow]; }; + geneplotter = derive2 { name="geneplotter"; version="1.70.0"; sha256="1d085lfa3yif5wkys1fb0zzgg0cqwd1y18vasgqqdr6rva075d4z"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; + genoCN = derive2 { name="genoCN"; version="1.44.0"; sha256="17wy1maxdx8bgyyl702d2xv36a3xxcv4illb2wfrckgqpbfszaib"; depends=[]; }; + genomation = derive2 { name="genomation"; version="1.24.0"; sha256="0qa3b4mfd7l1sy4pw64zr2d90y5apah900krxjl4x39acygg0i2r"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer S4Vectors seqPattern]; }; + genomeIntervals = derive2 { name="genomeIntervals"; version="1.48.0"; sha256="0607nl792f12a2bdxlvljxh6q6j2k3r48mx0pira769s8yzfqn03"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; + genomes = derive2 { name="genomes"; version="3.22.0"; sha256="09219wbqsnjpn8x2ys25qzmfl0v1xmknlcda024a8iag182j2lkm"; depends=[curl readr]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.24.0"; sha256="0q0xdr21pgn1a12cxvjrkzcan0aw4nwlh4k7y4h5axy2kvzq21yw"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.20.0"; sha256="1yykvk3l1swqfafwwmx29klz6rnd3v3k7wdkkiwrdbg7v6y85g3c"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; }; + gep2pep = derive2 { name="gep2pep"; version="1.12.0"; sha256="1db88grh7vip52283pln5m2l2jsqs900q847zfqydlgv32kdh2rr"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; + gespeR = derive2 { name="gespeR"; version="1.24.0"; sha256="01n1bz47cacdbggnp2zkwx5yjy0r06ckm7kmdb795av1vpk9ndgm"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + getDEE2 = derive2 { name="getDEE2"; version="1.2.0"; sha256="0d7m96bgm4grqb02symchifrykxali3j21iml451gixd8fxmhmgj"; depends=[htm2txt SummarizedExperiment]; }; + geva = derive2 { name="geva"; version="1.0.0"; sha256="148q7yw3z09f66rwsy5nqzg20hac3gdssf9m1j3b9vkki4gvcyzj"; depends=[dbscan fastcluster matrixStats]; }; + ggbio = derive2 { name="ggbio"; version="1.40.0"; sha256="0k3dxacrwgyrkvm7ggc2s1s1pbfs6c0a7ngykkj7jnc73czvnilx"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.20.0"; sha256="0jd6m84m4znnpix4bcgdby7mnflsn206f5x2vw9n8rxnwzx77wpg"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; }; + ggtree = derive2 { name="ggtree"; version="3.0.4"; sha256="0xf4b9vfdyzzivwgw4ymapl5bb4k9p04mmr53822kxgfd5qrs1zx"; depends=[ape aplot dplyr ggfun ggplot2 magrittr purrr rlang scales tidyr tidytree treeio yulab_utils]; }; + ggtreeExtra = derive2 { name="ggtreeExtra"; version="1.2.3"; sha256="19hp5hl5fyw7zk45hgxxldg84wwg3jrpx377j7g61bjv5wjzp0ig"; depends=[ggnewscale ggplot2 ggtree rlang]; }; + girafe = derive2 { name="girafe"; version="1.44.0"; sha256="0f6v7h59p9xqb6zvwx250g4drszmd88lp39sbkyyc2nqvsldxg9g"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + glmGamPoi = derive2 { name="glmGamPoi"; version="1.4.0"; sha256="19k0g1xklfllrgpmpwy1984w1f4w801ph8svrnyaf2p5kz6r9n4w"; depends=[beachmat BiocGenerics DelayedArray DelayedMatrixStats HDF5Array matrixStats Rcpp RcppArmadillo SummarizedExperiment]; }; + glmSparseNet = derive2 { name="glmSparseNet"; version="1.10.0"; sha256="0949sq4nwbdnpagcl4qazg7rx6c88alkm8zfalcan6lvk3q50rw0"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet glue httr loose_rock Matrix MultiAssayExperiment readr reshape2 sparsebn sparsebnUtils stringr SummarizedExperiment survminer]; }; + globalSeq = derive2 { name="globalSeq"; version="1.20.0"; sha256="0j2nh12laf377l3q5dlfq2jp1zdz38m8snspgcphd848ba792rlf"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.46.0"; sha256="1f992kqil9c6gfai5z558mpihmp084qmimvfi7ndmqz69nryj2iz"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.34.0"; sha256="1ir2ww5nll9s601z5nl9w7nhmkjzkadj8ahjxbda8l359vl2zmfa"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + gmoviz = derive2 { name="gmoviz"; version="1.4.0"; sha256="1574gs7h9c77d9rfvxjdnvqwibhccc2mphjcginfqhzac3yj8p87"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; }; + goProfiles = derive2 { name="goProfiles"; version="1.54.0"; sha256="1am2y6hsmx0h54x7bdix272c57fi2zc2sdjj8g36fzmqvvv98cpm"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; + goSTAG = derive2 { name="goSTAG"; version="1.16.0"; sha256="1chd8jsws01am71an1y2y1ff4kwb61sx6zyk0nq56wx53iwvfp9j"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; + goTools = derive2 { name="goTools"; version="1.66.0"; sha256="1j9wblr9bbj38bdy6fxrqfzk4rk1c5l2ycdvdis9mk84h7physwv"; depends=[AnnotationDbi GO_db]; }; + goseq = derive2 { name="goseq"; version="1.44.0"; sha256="07qrxssx4rb8r958r1smx8xfpzdxpp55hci3201hcmz3mxz77i0s"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpart = derive2 { name="gpart"; version="1.10.0"; sha256="12ylbbsgiwpx0lsk96v6kh869hg00hbr4nrd0h3qh54qj0xfdrgh"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + gpls = derive2 { name="gpls"; version="1.64.0"; sha256="0rpyyvg0kdj08l6njm61gxn43dvmvrq8vlzdgdw0x2kfhmnzlrhx"; depends=[]; }; + gprege = derive2 { name="gprege"; version="1.36.0"; sha256="1ykybxyzr6ksycxl4d4k4a9c4vjg2xjxa2qhr8827sczrwpchg07"; depends=[gptk]; }; + gpuMagic = derive2 { name="gpuMagic"; version="1.8.0"; sha256="0xvavfiy5lhmhg5mqxrhbjp5pqv5cz23n7bkn857h6nln9cwybar"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; }; + granulator = derive2 { name="granulator"; version="1.0.0"; sha256="0m11l4889nc7gv3kvsx9m6cc8vjkskxnv18fkw9hai5c5p7iy6n3"; depends=[cowplot dplyr dtangle e1071 epiR ggplot2 ggplotify limSolve magrittr MASS nnls pheatmap purrr rlang tibble tidyr]; }; + graper = derive2 { name="graper"; version="1.8.0"; sha256="1005srn4kjz7hfaw4yiggl63ia0am001j1mrsgrp2bf2362rhxdb"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; }; + graph = derive2 { name="graph"; version="1.70.0"; sha256="1i7s198d5kw4gk6nqqsd3vqaknj4493p822f2za8q95gv6x02rxa"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.38.0"; sha256="11bgz6951nfygxp3fm0190gf2bb5zplis1bc0am4757liw4qybhf"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.26.0"; sha256="1h63vg1iskw79ijg5h1b9097ams8pp3kvnlawlfci6xfli07xpkj"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gscreend = derive2 { name="gscreend"; version="1.6.0"; sha256="0rfvcbf54cwmyzis588gnaqidg4r7fvv2pfmjzvb4zfxi6sv12ak"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; }; + gsean = derive2 { name="gsean"; version="1.12.0"; sha256="02q2z84fwr66vamiqbf8zkc21gydplsxsq20cpinvjggpqhk5mqd"; depends=[fgsea PPInfer]; }; + gtrellis = derive2 { name="gtrellis"; version="1.24.0"; sha256="0l5271cpzjlm4m0v6xcdg2vxlbhn53x1fd59ynb9jwll93av5h1f"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.24.0"; sha256="0109cxsviq1sk5hfwkjzd0y1kpm934287asjjd0j8jhh4b0ah2b2"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges readr S4Vectors snpStats VariantAnnotation]; }; + gwasurvivr = derive2 { name="gwasurvivr"; version="1.10.0"; sha256="1gpk24d7w2my69zz4df0ifjjayxjv9p7wfwgbl71xm54mk8a2i17"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.26.1"; sha256="10m7qcvv7q642syrhf6h9l2lxnd1gsap4r1rrwwk53wg7zln8w8r"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; }; + hapFabia = derive2 { name="hapFabia"; version="1.34.0"; sha256="0182zihrdpqqcgbws69adq0sfwczd7794ygbmz211wzppszv5zzv"; depends=[Biobase fabia]; }; + hca = derive2 { name="hca"; version="1.0.3"; sha256="1bk3hmw5r9wp8ljcdmafsr6shcxh5x4zcqba2y527cg40abgga9p"; depends=[BiocFileCache dplyr httr jsonlite tibble tidyr]; }; + heatmaps = derive2 { name="heatmaps"; version="1.16.0"; sha256="0bw6l44d1xx8qkc0y3nv378q8nb5bwab7jvk3zndn3jy1wf835sn"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; + hiAnnotator = derive2 { name="hiAnnotator"; version="1.26.0"; sha256="1snw5q14p236x630k8si46ky90736yws0k8sqla8gw1j13ipicry"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; + hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.28.0"; sha256="1yhwbn93g4h1154h87kzk5iyam8cxs9wn3rf1aicb141d635c4cr"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; }; + hierGWAS = derive2 { name="hierGWAS"; version="1.22.0"; sha256="0rfil5f6fwij11yyg05y7rkssnzmdgg9ip26f8vph1x3kmaiyrii"; depends=[fastcluster fmsb glmnet]; }; + hierinf = derive2 { name="hierinf"; version="1.10.0"; sha256="0cfgq38012fjgx66zlscfs3xbsrd8w1bc2xzc87768b0j6rfw0rd"; depends=[fmsb glmnet]; }; + hipathia = derive2 { name="hipathia"; version="2.8.0"; sha256="0qrwxlwxcn7jq9nnvhxavf6r30xz3z7im0y7qkg2hf1c5qysd0yq"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; + hmdbQuery = derive2 { name="hmdbQuery"; version="1.12.1"; sha256="0hslspr69p9i0ny9srcyd8br57hfid1wpnz0ir28vmd1zcnq2dc4"; depends=[S4Vectors XML]; }; + hopach = derive2 { name="hopach"; version="2.52.0"; sha256="1a5cvx0ziiw45jwzcpbdjqdz9svmbygdz7rl3lvw8z4gl8alhbzb"; depends=[Biobase BiocGenerics cluster]; }; + hpar = derive2 { name="hpar"; version="1.34.0"; sha256="0q5pp04rq2gsh1kibvp8bvjkqc1kb46qpnj6agqp2vyqhrrfrm99"; depends=[]; }; + hummingbird = derive2 { name="hummingbird"; version="1.2.0"; sha256="1jxm6rynr4q41g0ryx7smib1jyisafa38hijji6n8dgrsmmhmkf4"; depends=[GenomicRanges IRanges Rcpp SummarizedExperiment]; }; + hypeR = derive2 { name="hypeR"; version="1.8.0"; sha256="0lg3slb35nmpakbxskfmk774hhxwzg660gw4z0pzacm34r8syzh9"; depends=[dplyr ggforce ggplot2 htmltools httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable reshape2 rlang rmarkdown scales shiny stringr visNetwork]; }; + hyperdraw = derive2 { name="hyperdraw"; version="1.44.0"; sha256="1qkxixkgvvfha0ii8rwwcbrbjmbbxsy8afv5ymcq01k3hbykx44r"; depends=[graph hypergraph Rgraphviz]; }; + hypergraph = derive2 { name="hypergraph"; version="1.64.0"; sha256="01knpd964m2g9vwd7c72qnc8g2p2pzhvk7lin4mhvcmb3pvsdlh7"; depends=[graph]; }; + iASeq = derive2 { name="iASeq"; version="1.36.0"; sha256="1zxi6qs84l26bljrm8w551lpndsbsivw9lzskqa8hisk7v9mhnwg"; depends=[]; }; + iBBiG = derive2 { name="iBBiG"; version="1.36.0"; sha256="1hj0b13zly6i23h1l4v62g7w7napdh4k8i01yypgysdkn6y7bn1w"; depends=[ade4 biclust xtable]; }; + iBMQ = derive2 { name="iBMQ"; version="1.32.0"; sha256="15yyz68afmdyw8xpxk4j8g7vhqrmndhr7hy0qfw2inb082fggh59"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.20.0"; sha256="1vjxm4dkrr8wghrg8mf70csdmnjmksq3nh1s5zndfjvcbz233m7f"; depends=[gtools Hmisc plotrix]; }; + iCNV = derive2 { name="iCNV"; version="1.12.0"; sha256="0672sb46iqrbab8zfcl2vmkxg5y9y394nn18r0i6ysc4ln97v5vr"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; + iCOBRA = derive2 { name="iCOBRA"; version="1.20.0"; sha256="190rkx3sivj68in36hhin5v535yd6fvlvm7l90w1bl38zpb7p6jn"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; + iCheck = derive2 { name="iCheck"; version="1.22.0"; sha256="02mlfdlgsj23j3gxahalvxqz29b3zrh7qy7drd11dj9689b66hbw"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; + iChip = derive2 { name="iChip"; version="1.46.0"; sha256="0jjdpx4rz22ib0zcbnjndbvimrhm107i7vmg96a8zqxhi9335cvn"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.28.0"; sha256="1haj25c4cmmjjvh181b41a9pvkh92f7k2w4ljn17iqg31vm45za1"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.22.0"; sha256="1kygn8xawglg7n39m45l3g3s31hm4l2hyi6hc93h656i990qdwgv"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.36.0"; sha256="1f02319p9q7jn3zw2pqxvy9pan0wfz6qc4gcf0vsdxzll156wbfd"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSEE = derive2 { name="iSEE"; version="2.4.0"; sha256="0rqzy8dj48md72b2c4d1mb1immncv0xqsmal6k5f34f9ckgyz580"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 ggrepel igraph mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; + iSEEu = derive2 { name="iSEEu"; version="1.4.0"; sha256="1zs11836hn57vvf4fjkq6nhsyw2qqhplk967b8mc9jsw97ah0dza"; depends=[colourpicker DT ggplot2 IRanges iSEE S4Vectors shiny shinyAce SingleCellExperiment SummarizedExperiment]; }; + iSeq = derive2 { name="iSeq"; version="1.44.0"; sha256="0yw9zg9210al5k8m1dzq5a1rn8kb2wcscbavdapk2zlz1qhs2cl5"; depends=[]; }; + iasva = derive2 { name="iasva"; version="1.10.0"; sha256="1i2jnyaayqwdz5sfa9lbbw7vjwk55cp30caiy4x09b0dsb5pxxdn"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; + ibh = derive2 { name="ibh"; version="1.40.0"; sha256="13gbgi1wymx36khnvhrr47q7laxhg6kxmcc8vmlfsv804ckcy4mx"; depends=[simpIntLists]; }; + icetea = derive2 { name="icetea"; version="1.10.0"; sha256="1yrbgwrwilgm15v0aqw160xid52qb7ggd0k0qc44bjgrn0xs7iqf"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; + ideal = derive2 { name="ideal"; version="1.16.0"; sha256="1m636ippzyb8ccbbcazp1sifsld4glwavzx3ljl632p1438l1w8m"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; + idiogram = derive2 { name="idiogram"; version="1.68.0"; sha256="08py2vllkqsarzgbk3r0jnd2dw18f71d1gb9qbbjrkac4i1f6rpk"; depends=[annotate Biobase plotrix]; }; + idpr = derive2 { name="idpr"; version="1.2.0"; sha256="17xvmwc0kpc74az89zp17qrd24ghnd11a76hb037pfyda285l067"; depends=[Biostrings dplyr ggplot2 jsonlite magrittr plyr rlang]; }; + idr2d = derive2 { name="idr2d"; version="1.6.0"; sha256="1yp0s9qbwdh34m6xxly4nf5j1f7n8cpxwqibwwb18wlklq8i4g22"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; }; + igvR = derive2 { name="igvR"; version="1.12.0"; sha256="0w1p9y3j45zw2gl5akdjkxla8vyyq8yvj70czp44dq6898d8875l"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb RColorBrewer rtracklayer seqLogo VariantAnnotation]; }; + illuminaio = derive2 { name="illuminaio"; version="0.34.0"; sha256="1sy0i3nbzsw4ymdxaiwpyx1vcg9yp3i8xfjcymqwhv95j3kyglv9"; depends=[base64]; }; + imageHTS = derive2 { name="imageHTS"; version="1.42.0"; sha256="104b7zg7svqka44rdyfk3ay0qwmh9gwynx65cdxdl6wfjr2jlqfg"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; + immunoClust = derive2 { name="immunoClust"; version="1.24.0"; sha256="0f02vjivhb3niv32mf1hnvv9pljgww3mya5hw7ryshkwf0rhwa49"; depends=[flowCore lattice]; }; + immunotation = derive2 { name="immunotation"; version="1.0.1"; sha256="04by6nr8szn62cil0rb748089l1j9zbfn6lazb6qdxwkqygk7b7k"; depends=[curl ggplot2 maps ontologyIndex readr rlang rvest stringr tidyr xml2]; }; + impute = derive2 { name="impute"; version="1.66.0"; sha256="0pprkv25avxhllddcssvqvy3nibmqkfwaq4xnlhka7858gyiyd1k"; depends=[]; }; + infercnv = derive2 { name="infercnv"; version="1.8.1"; sha256="1li3zqwh00qf0a6kjbli703j530kapb5fr0sy084rc6n32kqfkyq"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov leiden Matrix phyclust RANN RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; }; + infinityFlow = derive2 { name="infinityFlow"; version="1.2.0"; sha256="088b0m63205vcwjja0lj0mj6h90m0abfj46lsdghxjd2gwz6r8km"; depends=[Biobase flowCore generics gtools matlab pbapply png raster uwot xgboost]; }; + intansv = derive2 { name="intansv"; version="1.32.0"; sha256="0xqk4kyjv95vmhkpx7lhdwavpf0v1sg5829wm5fg88jlpn8zr30s"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; + interacCircos = derive2 { name="interacCircos"; version="1.2.0"; sha256="17647z6h91656rdsynn3dg9b853n32nvl7sl108w9d9iby806gjb"; depends=[htmlwidgets plyr RColorBrewer]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.30.0"; sha256="1jgvm3vwaz62hrhs3qsvmpy4xh5q8l6hbhg53gx75f08pg0ks8bp"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.30.0"; sha256="00rgrrmglslgb6j7whp0m5dlyl4436r647br05rrpv8cxrmbs2iv"; depends=[BiocGenerics DT shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.40.0"; sha256="0zp1ljx1wzyzvihjlv6ww5rfhqsnl6rffsczsc5arcn8583f7zk7"; depends=[haplo_stats]; }; + ipdDb = derive2 { name="ipdDb"; version="1.10.0"; sha256="0a0c8ls4dm671pdjlx3as3mai50v2j6fxdawlm5fy74nqvpahhfr"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; + isobar = derive2 { name="isobar"; version="1.38.0"; sha256="04894wnygby4f7mazg7wj25wrhdjmliw4k9sg4dcym7qvmw1qh37"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.20.0"; sha256="07jjvgkfgrj1kyj18y323pdr1d3b51s4kbwhikcz1v6zyfii06ha"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; }; + iterClust = derive2 { name="iterClust"; version="1.14.0"; sha256="0qxfb6dwmvhy15sd4rk4dac0mpy6ydhvjw5jq9w6frmzg13azrnx"; depends=[Biobase cluster]; }; + iterativeBMA = derive2 { name="iterativeBMA"; version="1.50.0"; sha256="0vr74j8x1n7qavg4cj5w08j7i18ndkw48wl9sxgcwfx1h9p8362y"; depends=[Biobase BMA leaps]; }; + iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.50.0"; sha256="1fmbxn4lh4a49ixwv8qs1czlz2qz4s989mmia5pkinrymn08gyl6"; depends=[BMA leaps survival]; }; + iteremoval = derive2 { name="iteremoval"; version="1.12.0"; sha256="1xjhnm17g76r65rllai7pkxnlhd2rflpsimg2r1l8smqkhsqb1y1"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; + ivygapSE = derive2 { name="ivygapSE"; version="1.14.1"; sha256="0hirk97ild9g7svzjgh6l58zjcrlbcxs7msf7155x7mmbiil8p14"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; + karyoploteR = derive2 { name="karyoploteR"; version="1.18.0"; sha256="11sgxz2xz685pgm8mf0hzm6aryx4fj5g3dlffjzpqxh3awfqa19p"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + kebabs = derive2 { name="kebabs"; version="1.26.1"; sha256="04q7rgi2wfbq7zkaxq6xkx4v9plk6l87250w7y3djrkynqv6nxcl"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + keggorthology = derive2 { name="keggorthology"; version="2.44.0"; sha256="1c25g3pw2aza61zrghh2kxrscdjc23nk2ly5pdz5phcyiim2z98p"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; + kissDE = derive2 { name="kissDE"; version="1.12.0"; sha256="00zw2hq4ncfcww9q1rcmh1zcf0ndgdiycmf71y7nwp8lwclrwf1b"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; + lapmix = derive2 { name="lapmix"; version="1.58.0"; sha256="1845pchhjvr1k1m0zz3llp50jf1dig9p518qw15hlp9gd3hl1zw0"; depends=[Biobase]; }; + ldblock = derive2 { name="ldblock"; version="1.22.1"; sha256="16vp5psmigxdkkd6fbivb6s8mvd7rsnm771wsbjvayl2y7ig7kq4"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; }; + lefser = derive2 { name="lefser"; version="1.2.0"; sha256="0wxv16di1cv14sv0nsfzkqlxxvmw0yi8a8qr12l5flzgq5dyz1ah"; depends=[coin ggplot2 MASS SummarizedExperiment]; }; + les = derive2 { name="les"; version="1.42.0"; sha256="11w7xk57wdrh2b47kj282wrshcy9rqj7vl537dpi7b7kjy7sz4g7"; depends=[boot fdrtool gplots RColorBrewer]; }; + levi = derive2 { name="levi"; version="1.10.0"; sha256="0x95159vbkry3lcblxqa9cc8hfcbmx3906xnmpl4cpl8fk3ydlfn"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; + lfa = derive2 { name="lfa"; version="1.22.0"; sha256="1lqcgb8v6xy8vi6i3pjyghiniwsq10a262b2j3smgghjg5dp8mf6"; depends=[corpcor]; }; + limma = derive2 { name="limma"; version="3.48.3"; sha256="0385ac0hvvml99krcgcpp6q7layjhzgp9xcxkcjrpfg5mjg1z4sx"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.68.0"; sha256="0pday8vb7kl10111nh5d7rcp3djy7wxmakam17d4032gfyslcj4j"; depends=[limma R2HTML tkrplot xtable]; }; + lionessR = derive2 { name="lionessR"; version="1.6.0"; sha256="0p1abfp4jvykrng190b9x8z3l0mgvbnbi59cqhv71ahvzcb0mm76"; depends=[S4Vectors SummarizedExperiment]; }; + lipidr = derive2 { name="lipidr"; version="2.6.0"; sha256="158i1fsxqm0qzxbnnq123vbd0qc46an1q0mzz7dx1nsh5q8qn0gv"; depends=[data_table dplyr fgsea forcats ggplot2 imputeLCMD limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; }; + lisaClust = derive2 { name="lisaClust"; version="1.0.0"; sha256="1slhdhg3i6cs2xlkravghjfnbv1bkfk5pgb5gx2f1cxl9mi2inb1"; depends=[BiocGenerics BiocParallel class concaveman data_table dplyr ggplot2 purrr S4Vectors spatstat_core spatstat_geom spicyR tidyr]; }; + lmdme = derive2 { name="lmdme"; version="1.34.0"; sha256="1irdhq21ln3a5f20hiwwa58z4v92bqlp43cyd4jwdq8k665lq3df"; depends=[limma pls stemHypoxia]; }; + loci2path = derive2 { name="loci2path"; version="1.12.0"; sha256="0msx3kpw06rsnfpm6mlrn700n8w1zaq000a86sps9hw15z1df2ka"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; + logicFS = derive2 { name="logicFS"; version="2.12.0"; sha256="0k2a718wxq8aqm3i7x01h0zwz7a69m604kkxq85x7gxrx2baqa79"; depends=[LogicReg mcbiopi survival]; }; + logitT = derive2 { name="logitT"; version="1.50.0"; sha256="1z51dy6z12qvb3py9w02j2w94vj8xsyar3mhz54spfkc5jka2bw6"; depends=[affy]; }; + lpNet = derive2 { name="lpNet"; version="2.24.0"; sha256="16kdc5xfiiv2vzmjywywfdx42qf01nbpyzfnq0gq4wnqjnqckxjc"; depends=[lpSolve]; }; + lpsymphony = derive2 { name="lpsymphony"; version="1.20.0"; sha256="0aw4b3p5z8ys7zlwy8s3bsqk03xwx42311yxr7q14w3f7sn3shzn"; depends=[]; }; + lumi = derive2 { name="lumi"; version="2.44.0"; sha256="0qjdxjdzfnnxcm07bf51v38388s5qf1i03l1sdb9jf3gxdh8yh02"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; }; + mAPKL = derive2 { name="mAPKL"; version="1.22.0"; sha256="061y4rcg0shdlk5h63jy2gib8bm775bz6xrzzxsrw4pp9bj67irk"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; }; + mBPCR = derive2 { name="mBPCR"; version="1.46.0"; sha256="04218jnk1g37nmf03a3lkc0a0lc2s91d2b5i8isvcw293fdx3ckl"; depends=[Biobase GWASTools oligoClasses]; }; + mCSEA = derive2 { name="mCSEA"; version="1.12.0"; sha256="0ffvnvxmmb25pnh7v9bln9kaa99417aj3jhad1nbbdg0nvgcbx87"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; }; + maCorrPlot = derive2 { name="maCorrPlot"; version="1.62.0"; sha256="0ry46nc49gjzb0f3xlj3yfb1j2air8czrkvbg69403bs39b4lidw"; depends=[lattice]; }; + maPredictDSC = derive2 { name="maPredictDSC"; version="1.30.0"; sha256="1k8zibi8pdcdhignm0i0ram8v1v6sqfkpv2wlyqsmr5z2wz79hqk"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; + maSigPro = derive2 { name="maSigPro"; version="1.64.0"; sha256="192yd7pdx8smblzbqcjgbk6gy1vjy5n9s63za3yzigrkvf3mw1bq"; depends=[Biobase MASS mclust venn]; }; + maanova = derive2 { name="maanova"; version="1.62.0"; sha256="13bspz2x4dbpyldmy5qn2449jr14xrxxziczgp5cp351n3srx0l4"; depends=[Biobase]; }; + macat = derive2 { name="macat"; version="1.66.0"; sha256="1bwas3h5pcrkd5jyg30biqdcgkfpjdsi1y2llr7wwx6clrabls22"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.66.0"; sha256="1v8zpxxzmzkq1b88xx5ji9bn8xjas69s093864mywgr2dx3w25dc"; depends=[ade4 Biobase gplots RColorBrewer scatterplot3d SummarizedExperiment]; }; + maftools = derive2 { name="maftools"; version="2.8.05"; sha256="0760qp75rawanfbfx834ds7r7lb3q6g3ix38sv7z84nm34bc77wl"; depends=[data_table RColorBrewer Rhtslib survival zlibbioc]; }; + maigesPack = derive2 { name="maigesPack"; version="1.56.0"; sha256="0k0ybh8852yd9ybpsdyqrb5cdkcbw4rb61ixakq07j6i2j78ac1n"; depends=[convert graph limma marray]; }; + makecdfenv = derive2 { name="makecdfenv"; version="1.68.0"; sha256="0dm7dpix6baa1jwn2x7ilbf9c2hhli0cyy3bdfcdzjpwfvrvwb36"; depends=[affy affyio Biobase zlibbioc]; }; + mapscape = derive2 { name="mapscape"; version="1.16.0"; sha256="07m1mh1chkflcgillrbb54zkkk0827cm5w055dsb849r4ri5a0h8"; depends=[base64enc htmlwidgets jsonlite stringr]; }; + marr = derive2 { name="marr"; version="1.2.0"; sha256="00khqvb8fc1z8i2rb2vy1mxwzqyh0sc6c99yb1jqnbbdsmjsayqx"; depends=[dplyr ggplot2 magrittr Rcpp rlang S4Vectors SummarizedExperiment]; }; + marray = derive2 { name="marray"; version="1.70.0"; sha256="0wpmrhqpyv27h1hn31hzz21r74r7yqx79ljv8i8gn6ix8lf5ca56"; depends=[limma]; }; + martini = derive2 { name="martini"; version="1.12.0"; sha256="1zzpxbhwwla8cljla4pyj7fvj5qclb0q9y91fbhikqrf53as22xp"; depends=[igraph Matrix Rcpp RcppEigen snpStats]; }; + maser = derive2 { name="maser"; version="1.10.0"; sha256="1cbi8768blj5ccn9h5pinx5iwdmn0wh4mdgy5ayvqqb2ngxllhj8"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; + maskBAD = derive2 { name="maskBAD"; version="1.36.0"; sha256="0j3mdb7gr1352qs70x89yclrws65ld1mqbn4yzyhhcsryhwlaskk"; depends=[affy gcrma]; }; + massiR = derive2 { name="massiR"; version="1.28.0"; sha256="1azcmh8ryblyrp929j16lm2nw03s7lixa18d3srx4qwkhafmk1gm"; depends=[Biobase cluster diptest gplots]; }; + matchBox = derive2 { name="matchBox"; version="1.34.0"; sha256="0jsr5zcdmlq2wgq6wj8v84hb9l0q9lq49a9yvxpjq5fz4mjrbh42"; depends=[]; }; + matter = derive2 { name="matter"; version="1.18.0"; sha256="0g1xn8lrn0jw8mxqrmz9yarlp0b50z8hx25yrg6fmmqb5fklrl90"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; }; + mbkmeans = derive2 { name="mbkmeans"; version="1.8.0"; sha256="1k7ngpx4s50jplrsv19zzjr7izpdl9wwppb218ih5cp0ki1gcc2n"; depends=[beachmat benchmarkme BiocParallel ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment]; }; + mdp = derive2 { name="mdp"; version="1.12.0"; sha256="1z8f882by8izjql3qbgj9ixjiclcz315b44h6l2crlfqmi6rnrfl"; depends=[ggplot2 gridExtra]; }; + mdqc = derive2 { name="mdqc"; version="1.54.0"; sha256="1vihcpxa9azishzk91qk8fslan0xiq1mqm6r23r575czz7d7q7r3"; depends=[cluster MASS]; }; + megadepth = derive2 { name="megadepth"; version="1.2.3"; sha256="0grgj7bzyqnxby0sx5ic1h9bzmx19xwl0a5b3v6wbnwqcla2i3kg"; depends=[cmdfun dplyr fs GenomicRanges magrittr readr xfun]; }; + memes = derive2 { name="memes"; version="1.0.4"; sha256="1lq4yngb6530mqbk13ln4ddlj63dpsjnzj0rkbqynh1gnvsjm0m3"; depends=[Biostrings cmdfun dplyr GenomicRanges ggplot2 ggseqlogo magrittr matrixStats patchwork processx purrr readr rlang tibble tidyr universalmotif usethis xml2]; }; + meshes = derive2 { name="meshes"; version="1.18.1"; sha256="1i9p3nhwmx85c8b1i924nblb6cpw565mzavf0lsp17gnm3g5jy40"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db yulab_utils]; }; + meshr = derive2 { name="meshr"; version="1.28.0"; sha256="14jhjm00jrb5dfjqjhk2pxla0fr3dldj6271kkr8d1ccz3s00r6m"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; + messina = derive2 { name="messina"; version="1.28.0"; sha256="03ak4njag62mi1ip6bhfj04hqqgn7q07sspsaxvbl28q6qsrnhdl"; depends=[foreach ggplot2 plyr Rcpp survival]; }; + metaCCA = derive2 { name="metaCCA"; version="1.20.0"; sha256="1di91vrrh6wh4ha57izdn2bv83id6r3f1x2i818dxznivfjlgs7m"; depends=[]; }; + metaMS = derive2 { name="metaMS"; version="1.28.0"; sha256="0parnww85bprwpfyi4k5zk036vdz64dn1wfd7p913i8srhsrjylr"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; + metaSeq = derive2 { name="metaSeq"; version="1.32.0"; sha256="1s8966lmyiamdba4a714zdafhhsxgx7xsrsbd4g24nq46m3kmval"; depends=[NOISeq Rcpp snow]; }; + metabCombiner = derive2 { name="metabCombiner"; version="1.2.2"; sha256="1zyn1sphm0p50b5ni9kaicgmglh6h1pgbvx608imjjijvx3lk0lm"; depends=[caret dplyr matrixStats mgcv rlang S4Vectors tidyr]; }; + metabolomicsWorkbenchR = derive2 { name="metabolomicsWorkbenchR"; version="1.2.0"; sha256="1pjmwg04wqkf0das9h9wzk8arb4vf81j7yhmg71kq5982nl4whqa"; depends=[data_table httr jsonlite MultiAssayExperiment struct SummarizedExperiment]; }; + metabomxtr = derive2 { name="metabomxtr"; version="1.26.0"; sha256="0bj18czq4p8a5flwg19q63fv6jv0llybxr82ipg7zl5vjdkj6siz"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; + metagene = derive2 { name="metagene"; version="2.24.0"; sha256="07mhpizwq6shd38a3v1yb2kks68xh76ka68lprpfgk4mvnak8by9"; depends=[BiocParallel data_table EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; + metagene2 = derive2 { name="metagene2"; version="1.8.1"; sha256="1w3fvscsjklp2imxmwnbzgw0vr9xgl64k0bc9ln9sk2zqkf47av0"; depends=[BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.34.0"; sha256="08yxwy62aqynnrzb98p23zrh17gxvdj3jxzpd1shcssk3cakra37"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; }; + metahdep = derive2 { name="metahdep"; version="1.50.0"; sha256="1p63rhhk8kj2qlzxyrww3wlz0ni4irq5mghh537z3hn9vbiw2njz"; depends=[]; }; + metapod = derive2 { name="metapod"; version="1.0.0"; sha256="1hbcwr6d8gyrf4azh0gi588xkrg6gz7gsb5hbvzqkhplbsp6shlv"; depends=[Rcpp]; }; + metaseqR2 = derive2 { name="metaseqR2"; version="1.4.0"; sha256="1dmycdkjzx7ipzsa7x2ddzlrm72kanf80n375b7ajmr0zhazks8w"; depends=[ABSSeq baySeq Biobase BiocGenerics BiocParallel biomaRt Biostrings corrplot DESeq2 DSS DT EDASeq edgeR genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots harmonicmeanp heatmaply htmltools httr IRanges jsonlite lattice limma locfit log4r magrittr MASS Matrix NBPSeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp VennDiagram vsn yaml zoo]; }; + metavizr = derive2 { name="metavizr"; version="1.15.0"; sha256="16r5rnrk69qqy5w2ynpg3yx3h2cmrskvccg572v9k58g2n4gwkgs"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; + methInheritSim = derive2 { name="methInheritSim"; version="1.14.0"; sha256="0jjq98wgml432pshc2s9703aqhb2vg7jca28shhf73rjjcvss5jd"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; + methimpute = derive2 { name="methimpute"; version="1.14.0"; sha256="05br8cigmgvyvs36r8mzkhcxh9jwi14yd83v8z8w5y7yr9dyzaak"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; + methrix = derive2 { name="methrix"; version="1.6.0"; sha256="0mbbmg4b7in3h3dw10wzygmzxb0avar7pxfzq0fifh0kmv6f9lsg"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array IRanges matrixStats rtracklayer SummarizedExperiment]; }; + methyAnalysis = derive2 { name="methyAnalysis"; version="1.34.0"; sha256="05k3n7iy5ijidbnblbqqas8dsj8drwzbhyrbs8wl1ypkg51havi0"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; + methylCC = derive2 { name="methylCC"; version="1.6.0"; sha256="1jvhyajn6jzs2aqsjjzgkvh1jpmddfx7kgawa2cm97fi8qqrrsvv"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; }; + methylGSA = derive2 { name="methylGSA"; version="1.10.0"; sha256="03na89dh1f8ykkbfrwxin1g12dlbx4b7zaxngqswbz3q2jc9h66f"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; }; + methylInheritance = derive2 { name="methylInheritance"; version="1.16.0"; sha256="0llc2rpkqkg75wjjfgk3xpb9fapxzk7f10d1x6yxl5a19ws6j7sa"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; + methylKit = derive2 { name="methylKit"; version="1.18.0"; sha256="147nag4rz2xpjkkf8rmhja9k4ixjj1hsb0lq3lw7mw6q67zxsvf3"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; + methylMnM = derive2 { name="methylMnM"; version="1.30.0"; sha256="1av81b9s7dz7aa9g6pa13l5lyxn8frgb6shfq2if1sqsksfpmwmz"; depends=[edgeR statmod]; }; + methylPipe = derive2 { name="methylPipe"; version="1.26.0"; sha256="1q1bybxqal9ny04s71fwwyj29536glpcss5x7zbmj20kd1ll35dm"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; + methylSig = derive2 { name="methylSig"; version="1.4.0"; sha256="1phkc09vxyydn0qqy0r5j31lxcym0rznjwdqd8sh1diy0w7g23bf"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + methylscaper = derive2 { name="methylscaper"; version="1.0.0"; sha256="1a3hgfg4sybkn6ga9widfvrr8qw9r27k3r06g52rafbkvhanydkx"; depends=[BiocParallel Biostrings data_table Rfast seqinr seriation shiny shinyFiles shinyjs SummarizedExperiment]; }; + methylumi = derive2 { name="methylumi"; version="2.38.0"; sha256="1941rc524ssx8gwhmwk40mgfrhddfs6hgldvs7bi22r29gm4y7qj"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; + mfa = derive2 { name="mfa"; version="1.14.0"; sha256="18z88rhps3a7fa5za5y76dxnk95sawgyi33wcsq4zpx000gc9a01"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; + mgsa = derive2 { name="mgsa"; version="1.40.0"; sha256="15qs1fkakkk904243ym03zin54y49d3x0hc1skj82ly5dydp30k2"; depends=[gplots]; }; + miQC = derive2 { name="miQC"; version="1.0.0"; sha256="1z4yplsszrj6qi60q9r7w9chir4k0k2vjac7ss8895in8zr4xd23"; depends=[BiocParallel flexmix ggplot2 SingleCellExperiment]; }; + miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.16.0"; sha256="0lznnf33nmb5pvx8fyxn7krzr1a6a0wpca8w1jx2npgrl0jmfahp"; depends=[]; }; + miRLAB = derive2 { name="miRLAB"; version="1.22.0"; sha256="0qyc3hl31849jrjnbrk7vmks667qbf27kls8lbx72cdqhvhg9s0k"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl stringr SummarizedExperiment TCGAbiolinks]; }; + miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.20.0"; sha256="094jndkrkqv35xw669hymf0rfqf4b4y6pmwg3japd9qlz4gvgjwn"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; + miRNApath = derive2 { name="miRNApath"; version="1.52.0"; sha256="05ba7zrp6dkkgs7n3siy0hqaz1byp31q390vvxwa0wd2vbbhs0ks"; depends=[]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.26.0"; sha256="02mr56p22f5zy8d4bcy56h1995p2nq5w50n5yahb8fvkmjkw4d4c"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRSM = derive2 { name="miRSM"; version="1.10.0"; sha256="15bfss4dchdw21r2z5a9frfy579vmqndsmf4mx5cqhlk4j658rjx"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; }; + miRcomp = derive2 { name="miRcomp"; version="1.22.0"; sha256="0118l8qwr9v7ip2lhi6icijinqfrbays8d9q5rxaykdzyvs8q3ld"; depends=[Biobase KernSmooth miRcompData]; }; + miRmine = derive2 { name="miRmine"; version="1.14.0"; sha256="0h9v7gfn9m9bw0bjw7wvydq44sx97pr1zc089fvskmdnkwb4dxjw"; depends=[SummarizedExperiment]; }; + miRspongeR = derive2 { name="miRspongeR"; version="1.18.0"; sha256="1gl7y3rn3kajmbj5ql81mbrdr5lc7ml1ihafaialdvr9r9n4gx7z"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA survival varhandle]; }; + mia = derive2 { name="mia"; version="1.0.8"; sha256="0dkzz9ys1cvqfwj4f2gjd72pmj4nzm7nhjl5qhmgg4i7mblp3wwk"; depends=[ape BiocGenerics BiocParallel Biostrings DECIPHER decontam DelayedArray DelayedMatrixStats DirichletMultinomial dplyr IRanges MASS rlang S4Vectors scater scuttle SingleCellExperiment SummarizedExperiment tibble tidyr TreeSummarizedExperiment vegan]; }; + miaViz = derive2 { name="miaViz"; version="1.0.1"; sha256="0awwqmddjb23x3ydanw8q57j1995zw0zvs8cj459gwlqsmdi6bin"; depends=[ape BiocGenerics BiocParallel DelayedArray DirichletMultinomial dplyr ggnewscale ggplot2 ggraph ggtree mia purrr rlang S4Vectors scater SummarizedExperiment tibble tidygraph tidyr tidytree TreeSummarizedExperiment viridis]; }; + microRNA = derive2 { name="microRNA"; version="1.50.0"; sha256="1w9rp9n415jv1nxc9iac38zy7nfshxrclxqb3364xyj2ww1krik6"; depends=[Biostrings]; }; + microbiome = derive2 { name="microbiome"; version="1.14.0"; sha256="1ay491rvwmjj6gq9c5ic65v9hfakz8kkqhibb2c1nwvccxyl5ai2"; depends=[dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; }; + microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.6.0"; sha256="17jxqlppwf6z0028nsmsqib0xw1jzp34pjp51ijq3yw19krid20i"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; }; + microbiomeExplorer = derive2 { name="microbiomeExplorer"; version="1.2.0"; sha256="0f0mn4mb4x0s005f457v1d4fz8b0f0zvkzjy39mcc43jalm8nmw6"; depends=[Biobase biomformat broom car DESeq2 dplyr DT forcats heatmaply knitr limma lubridate magrittr matrixStats metagenomeSeq plotly purrr RColorBrewer readr reshape2 rlang rmarkdown shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr tibble tidyr vegan]; }; + midasHLA = derive2 { name="midasHLA"; version="1.0.0"; sha256="10zj510qbdrw449a5dkn5v26qfah58hd7y0cxcadkmn8kfq6y2ys"; depends=[assertthat broom dplyr formattable HardyWeinberg kableExtra knitr magrittr MultiAssayExperiment qdapTools rlang S4Vectors stringi SummarizedExperiment tibble]; }; + miloR = derive2 { name="miloR"; version="1.0.0"; sha256="1vll9zjbw1y9zd2qii0czrksdxggz5q45y958ih372dy5qwxlzki"; depends=[BiocNeighbors BiocParallel BiocSingular cowplot dplyr edgeR ggbeeswarm ggplot2 ggraph ggrepel gtools igraph irlba limma Matrix matrixStats patchwork RColorBrewer S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; }; + mimager = derive2 { name="mimager"; version="1.16.0"; sha256="0s0vwspbh7dslads2k0px6iij7fmhwz09j52p0nd942xlkan635a"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; + mina = derive2 { name="mina"; version="1.0.0"; sha256="0skaldzwp1qxhn6sbhy07672ha6ih1kwrbaxwvn9ln369c24znbn"; depends=[apcluster biganalytics bigmemory foreach ggplot2 Hmisc MCL parallelDist plyr Rcpp RcppArmadillo RcppParallel reshape2 RSpectra stringr]; }; + minet = derive2 { name="minet"; version="3.50.0"; sha256="0bir2zr4r2wawkdvdhrk2hcyxmgkrkfvx36jj85fcm24axlqrzzb"; depends=[infotheo]; }; + minfi = derive2 { name="minfi"; version="1.38.0"; sha256="189lzppvrz6bw2kpppawgsfjyh2ahyy8bi9z8srpas67qf2r8jmj"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + mirIntegrator = derive2 { name="mirIntegrator"; version="1.22.0"; sha256="0k03nda56ldabizxkl0hcmh77ri4y6h4av1rq0v0zkq00wj89rr2"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; + mirTarRnaSeq = derive2 { name="mirTarRnaSeq"; version="1.0.0"; sha256="0z4gm7q362kprdxxk41qva5ir33m9ddf190jra9jc2c2dh5ambxl"; depends=[assertthat caTools corrplot data_table dplyr MASS pheatmap pscl purrr R_utils reshape2]; }; + missMethyl = derive2 { name="missMethyl"; version="1.26.1"; sha256="1hmym59jpsr02l4324b7h82cmfr2q4m877r4vf3svf95r9rhavs4"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; }; + missRows = derive2 { name="missRows"; version="1.12.0"; sha256="168i6pmgpy50pp85nf5h042llxggcnbx042hzc14hp4pr87qxshm"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; + mistyR = derive2 { name="mistyR"; version="1.0.3"; sha256="0sidwpby8m3dahwzidbvskm0ghgw8c5kn60940m18x55pcdkh167"; depends=[assertthat caret deldir digest distances dplyr filelock furrr ggplot2 MASS purrr R_utils ranger readr rlang rlist stringr tibble tidyr withr]; }; + mitch = derive2 { name="mitch"; version="1.4.1"; sha256="1vwgd5pmvfwlwi0y4030h1ds4gchaw34d9afmskmr78jayrjd5cs"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra knitr MASS plyr reshape2 rmarkdown]; }; + mixOmics = derive2 { name="mixOmics"; version="6.16.3"; sha256="1x6dbw4q6p9vngm256fr96r9fjxk5nik5ivkhbl5a9zqyq8wagpa"; depends=[BiocParallel corpcor dplyr ellipse ggplot2 ggrepel gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; + mnem = derive2 { name="mnem"; version="1.8.0"; sha256="1knd28wps5rzr1m5fs7przjk3dv0v9sqcx9nw819zlchkl8xhfqc"; depends=[cluster data_table e1071 flexclust ggplot2 graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne wesanderson]; }; + moanin = derive2 { name="moanin"; version="1.0.0"; sha256="1ps420hgcrqvn0xbcb49h52af07mz0hr5ix5q12fdkvgyhrqa7s9"; depends=[ClusterR edgeR limma MASS matrixStats NMI reshape2 S4Vectors SummarizedExperiment topGO viridis zoo]; }; + mogsa = derive2 { name="mogsa"; version="1.26.0"; sha256="197s2kc1dd2y33w32w4pvhwav37mmgn6rvin4r2l0xy98mvjzkj5"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; + monocle = derive2 { name="monocle"; version="2.20.0"; sha256="05j1vc51f39xalggdq27y7218gkr3zq7fh7jhzsb4jj7fpn837ry"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; + mosaics = derive2 { name="mosaics"; version="2.30.0"; sha256="14jdgiy8wi5psglsq0z6svkn7r3dn5sil5prs2w32csl3w14g7c5"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; + motifStack = derive2 { name="motifStack"; version="1.36.0"; sha256="0yn348kmw7v46iym913ncx4yh5nxzmba8bdys52s12ldgjja53gp"; depends=[ade4 Biostrings ggplot2 htmlwidgets XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="2.6.1"; sha256="1n6v8a7c27aswmbrlcwcpghf27aplkc6nn923imglc3c0sh2lkrz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; }; + motifcounter = derive2 { name="motifcounter"; version="1.16.0"; sha256="1w2d68iaibz1gh0f1mlqb4grwv1i89v0vn11050w5pbqv2jbz9vr"; depends=[Biostrings]; }; + motifmatchr = derive2 { name="motifmatchr"; version="1.14.0"; sha256="1vif3dp4lv4jz1pxsq0ig791ir8q65jmrlqmkyfxpfxfj5alqnbm"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; + mpra = derive2 { name="mpra"; version="1.14.0"; sha256="19yyyswj82y1mgr4w62aai9v67p37waml8v42609r599bkch9k7r"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; + msImpute = derive2 { name="msImpute"; version="1.2.0"; sha256="1lz8qf48jmy5ihmfhl7vacrdwlzmpsp9sj6mavi0smv0kljgnlyd"; depends=[data_table FNN limma matrixStats mvtnorm pdist rdetools reticulate scran softImpute]; }; + msPurity = derive2 { name="msPurity"; version="1.18.0"; sha256="0zfha7x046bg2y1py8x99i826vyim01aapsnr4zr9i4qajj0cv1n"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 jsonlite magrittr mzR plyr Rcpp reshape2 RSQLite stringr uuid]; }; + msa = derive2 { name="msa"; version="1.24.0"; sha256="0gndkq0v4v1kg1s3v6m4n4l1kvll7hl7k103qyamic9ylh83q03j"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msgbsR = derive2 { name="msgbsR"; version="1.16.0"; sha256="129i8bvkdrqppli57di4a33xwxw4grlg23sii00w1b359f0w49mi"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; + msmsEDA = derive2 { name="msmsEDA"; version="1.30.0"; sha256="0555a3riyp781mlffmnf93igfq8vl8wjk51pa9qb48qkdn6y8pfc"; depends=[gplots MASS MSnbase RColorBrewer]; }; + msmsTests = derive2 { name="msmsTests"; version="1.30.0"; sha256="11vhy1l6za73dpdj85q4ksaghgd8vb2h8v9iirmsn2vpajqrvgjh"; depends=[edgeR msmsEDA MSnbase qvalue]; }; + msqrob2 = derive2 { name="msqrob2"; version="1.0.0"; sha256="1gahb7v4rmm1q4qs8z8ygz7xia76cwjim6j2wvy0dfm0ffk8ypbk"; depends=[BiocParallel codetools limma lme4 MASS Matrix purrr QFeatures SummarizedExperiment]; }; + multiClust = derive2 { name="multiClust"; version="1.22.0"; sha256="1hck6jgqapq4ik8lhpaypvm2zzlygpgydn0qg78iyz5b40imhrg4"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiGSEA = derive2 { name="multiGSEA"; version="1.2.0"; sha256="12dwhcsbhx8rp79q5jb0bykfys6mglccygdhj7yd91fhvb0vgins"; depends=[AnnotationDbi dplyr fgsea graphite magrittr metap rappdirs rlang]; }; + multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.10.0"; sha256="1rfs1gg34lb4qz0jdxailhd3swm8r1vyjdjsilw4hr5qlm3srhnh"; depends=[aggregation BiocParallel data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare pbapply pheatmap qqman]; }; + multiMiR = derive2 { name="multiMiR"; version="1.14.0"; sha256="1chgs9yk64r4wsyvg93c87cl9ja94x8d7cxlgr5026bslk5p42wy"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; + multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.16.0"; sha256="0kpmnlb35zjc4b9wb1711hmgwcizah9y7pl569zwil4pcyxhspia"; depends=[doParallel foreach SummarizedExperiment]; }; + multiSight = derive2 { name="multiSight"; version="1.0.0"; sha256="1mxpvzzw2nx2hs9vkw39d5psxk53gg1hwkniq93yzqz78239c168"; depends=[anyLib biosigner caret clusterProfiler config DESeq2 dplyr DT easyPubMed enrichplot golem htmltools igraph infotheo metap mixOmics networkD3 ppcor R6 ReactomePA rmarkdown rWikiPathways shiny shinydashboard stringr]; }; + multicrispr = derive2 { name="multicrispr"; version="1.2.0"; sha256="0qqrb5bq7vllqpi3z7bq3w2lfhgarr68axiq3mhk8y02ypqwlb21"; depends=[assertive BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; }; + multiscan = derive2 { name="multiscan"; version="1.52.0"; sha256="0wz05cfngms6891gzl8vqpf8fi7m0zvk0cjn849721dy54w5gffs"; depends=[Biobase]; }; + multtest = derive2 { name="multtest"; version="2.48.0"; sha256="1wi15v4llgv11hpb2j9h4a35nrnawnmvbz5d5dvgy8lhqrlq8w9a"; depends=[Biobase BiocGenerics MASS survival]; }; + mumosa = derive2 { name="mumosa"; version="1.0.0"; sha256="1wrc13jsiabc9yl9vv1f1q3pwg5a70z6382rqvyzj0jm2sal9766"; depends=[batchelor beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph IRanges Matrix metapod S4Vectors ScaledMatrix scran scuttle SingleCellExperiment SummarizedExperiment uwot]; }; + muscat = derive2 { name="muscat"; version="1.6.0"; sha256="0gm7nq2hx05d70gjaa3pa5fvm054i6fbz92p6icv0fn22jyqhv2q"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform scuttle SingleCellExperiment SummarizedExperiment variancePartition viridis]; }; + muscle = derive2 { name="muscle"; version="3.34.0"; sha256="01zlbglsag870pb71dzrzqra4l0wrqsi7yvbl1dq2rpla2y1wx5k"; depends=[Biostrings]; }; + musicatk = derive2 { name="musicatk"; version="1.2.0"; sha256="0mb7svg4ir8z1qdigzgxg5n5nhnacg7vvkvgv98av7af9vgc0zxl"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 BSgenome_Mmusculus_UCSC_mm9 cluster ComplexHeatmap cowplot data_table decompTumor2Sig deconstructSigs dplyr factoextra GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra gtools IRanges maftools magrittr MASS matrixTests MCMCprecision NMF philentropy plotly rlang S4Vectors stringi stringr SummarizedExperiment tibble tidyr topicmodels TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene uwot VariantAnnotation withr]; }; + mygene = derive2 { name="mygene"; version="1.28.0"; sha256="0agg6klx9qdpphdwxhmnywb9p010l680rym7h3cgkwxhfjpf0c6d"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.22.0"; sha256="07c6qszvm5ppgpcbjqbznwv1nw8x2d30cpxlzkcawhp0yi4prwj7"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mzID = derive2 { name="mzID"; version="1.30.0"; sha256="1wsy6frxa5602jqb1nlqv39mzgpid8wfyvb9m2jb6srv7p59rgys"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; + mzR = derive2 { name="mzR"; version="2.26.1"; sha256="0z4cz6lir9gwzy0hxwv03wv36fkkfdb97p9wv4af020k0zkp3ipr"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; + nanotatoR = derive2 { name="nanotatoR"; version="1.8.0"; sha256="0jl1kgs45rmlb27avgly723askkklfdvi4z29hrp3lgavk7j6nc4"; depends=[AnnotationDbi hash httr knitr openxlsx org_Hs_eg_db rentrez rtracklayer stringr testthat]; }; + ncGTW = derive2 { name="ncGTW"; version="1.6.0"; sha256="0pn2250acf3hqh7wddw6zjdfmjz0lcfsqlc9sl90vpqbjsbwxl8v"; depends=[BiocParallel Rcpp xcms]; }; + ncRNAtools = derive2 { name="ncRNAtools"; version="1.2.1"; sha256="1y60xlf66fchbydrbi5yaxc2hgjin7av1b1s8p964n0wr5xkl35w"; depends=[GenomicRanges ggplot2 httr IRanges S4Vectors xml2]; }; + ncdfFlow = derive2 { name="ncdfFlow"; version="2.38.0"; sha256="1lm88qnfv6rnnr7wmgbvwyj272imjjjn7h3agxqqzsbmn8vyrnf0"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; + ndexr = derive2 { name="ndexr"; version="1.14.1"; sha256="0z3dmfv3rk0pyhh1kpgggfyy7i2gpv9rmvz5hfqq3rzh2gfnhfll"; depends=[httr igraph jsonlite plyr tidyr]; }; + nearBynding = derive2 { name="nearBynding"; version="1.2.0"; sha256="0ggpirbfb4qzj5bhys1jl4a8z7p4k0b8q76mggh7bizadahpikfm"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges ggplot2 gplots magrittr matrixStats plyranges R_utils rlang Rsamtools rtracklayer S4Vectors transport TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + nempi = derive2 { name="nempi"; version="1.0.0"; sha256="1sq5ylfnk8lga0pxmfa5mxxy2l9xijm6yawinqf94g3sw5hy7g80"; depends=[e1071 epiNEM matrixStats mnem naturalsort nnet randomForest]; }; + netDx = derive2 { name="netDx"; version="1.4.3"; sha256="09c6gqc4w8j9zsysm5ddq29798fgj7544n9n9sys7vyrz3nlq22k"; depends=[bigmemory BiocFileCache clusterExperiment combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet httr igraph IRanges MultiAssayExperiment netSmooth pracma rappdirs RColorBrewer RCy3 reshape2 ROCR Rtsne S4Vectors scater]; }; + netSmooth = derive2 { name="netSmooth"; version="1.12.0"; sha256="1zlsl81jbi0jcfb7xxvffvp9sndj42k81yc5nsrrz2sjrd666r7q"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; }; + netbiov = derive2 { name="netbiov"; version="1.26.0"; sha256="015vckpkm79qiaph9r1hi4fy9c2fmvg9a7ahckn8bhq0y23614xm"; depends=[igraph]; }; + netboost = derive2 { name="netboost"; version="2.0.0"; sha256="1m5sqydfy8rify51ggrzvx007n569a99sfik3f66hvii3kz09w9j"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; }; + netboxr = derive2 { name="netboxr"; version="1.4.0"; sha256="0pfw3bil0acjclpff6k3fz2xfc2myjzal8b78pab7dnng19a4n6p"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; }; + nethet = derive2 { name="nethet"; version="1.24.0"; sha256="1cr28n11gy5ns3alm3gmlxvy4v7bsiw7gvywdhf7y5xb4lfmrscv"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; }; + netprioR = derive2 { name="netprioR"; version="1.18.0"; sha256="0jfp85v0axv6wvl19hxxgmy4hcvjcb0qsb1lxa2zj3wvhngn7c28"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; + netresponse = derive2 { name="netresponse"; version="1.52.0"; sha256="1lfcandarcklw4x99f1xfcyyg58c19avanq2837r8n6x5dd77xaz"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; + networkBMA = derive2 { name="networkBMA"; version="2.32.0"; sha256="1990ay4yjbkbwi9khwhipirbj4qi2sqybbakj9jl89j7qng8rbs4"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; + ngsReports = derive2 { name="ngsReports"; version="1.8.1"; sha256="1j8fx5jf9mj768xizsnrs0wf9sc13i2rvg3shfvy36sqdamna7l8"; depends=[BiocGenerics Biostrings checkmate dplyr DT forcats ggdendro ggplot2 lifecycle lubridate pander plotly readr reshape2 rmarkdown scales stringr tibble tidyr tidyselect zoo]; }; + nnNorm = derive2 { name="nnNorm"; version="2.56.0"; sha256="0addah6zljlpimcj7a2m6sv8c91q9rrr8x6j103fsvqrdbpkr5m7"; depends=[marray nnet]; }; + nondetects = derive2 { name="nondetects"; version="2.22.0"; sha256="1kc7km6ac1ygfbna2y8l05h1067i580hc3ra1n09ca34yx6s9kh0"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; + normalize450K = derive2 { name="normalize450K"; version="1.20.0"; sha256="1dpzmiln6fs68kk4pmdd5z8090m3vgd96xhcy2jwr5b2aw4wqwva"; depends=[Biobase illuminaio quadprog]; }; + normr = derive2 { name="normr"; version="1.18.1"; sha256="1pcrqhby614rfs3ag148msg9qkj0zrm0dx2p5mka46s9zydxjily"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; + npGSEA = derive2 { name="npGSEA"; version="1.28.0"; sha256="0ww8i0gjajsipg7h9bdpjsmlk12x980fmkgls0rq5ba6g97mqnnl"; depends=[Biobase BiocGenerics GSEABase]; }; + nuCpos = derive2 { name="nuCpos"; version="1.10.0"; sha256="02nzzrisd7xybj54261mklpbibnsfhkw0752vc6qzrr05i1a788w"; depends=[]; }; + nucleR = derive2 { name="nucleR"; version="2.24.0"; sha256="010mkqvs9l7ykgrq28wal2p11h51lrfsf1jf27pbx34wb2xsvcf4"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; + nucleoSim = derive2 { name="nucleoSim"; version="1.20.0"; sha256="1q5wrrm1aav8abvz45jwv8z6jfyx5y8zzxfzp4ys36b8mdn93fp0"; depends=[IRanges S4Vectors]; }; + occugene = derive2 { name="occugene"; version="1.52.0"; sha256="19gqkghgb7jscdmb15yl422mln3agjg3xa9371y8d9z9xqcj1rr7"; depends=[]; }; + odseq = derive2 { name="odseq"; version="1.20.0"; sha256="01g0j07fkr6p3zqlz10mavs63z0d16rcg3qnvnrs8wykpkc34s23"; depends=[kebabs mclust msa]; }; + oligo = derive2 { name="oligo"; version="1.56.0"; sha256="0fyq77im6s79havjwbchhqhnllxs134jsi98g6msxz66h16lj3al"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.54.0"; sha256="1nsfyfpj264h6y322pzz0i001b0m862j3skbq5rjwlrj1p8j2gi7"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicRexposome = derive2 { name="omicRexposome"; version="1.14.0"; sha256="15qqn0vm302sqb91l1kzm9isyz0cz1d94fhlnf29pjgpr3vappma"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; + omicade4 = derive2 { name="omicade4"; version="1.32.0"; sha256="0qmiw6wic67fdx6p3f4am4z04yrvsy2jb7wsx3m2s6gg1nhaw4a7"; depends=[ade4 Biobase made4]; }; + omicplotR = derive2 { name="omicplotR"; version="1.12.0"; sha256="1iybnpdxbncvqkqlqlw12l3mxvn3j6pcw9da265zsxnc6ql6v5bx"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; }; + omicsPrint = derive2 { name="omicsPrint"; version="1.12.0"; sha256="071m4mq6ilm3k261qyk306gzhyaysxcw857z7pndgbqn697d1zcr"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; + oncomix = derive2 { name="oncomix"; version="1.14.0"; sha256="1bzz408jym0j5v6yikzbm2ywddb57k6yqfdrnd2yzqhadsyfqs04"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; + oneSENSE = derive2 { name="oneSENSE"; version="1.14.0"; sha256="1by42sxpbyysk30f9pypqm6ibn9rbcxj8y92ld5ammcwkmvq20f5"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; + onlineFDR = derive2 { name="onlineFDR"; version="2.0.0"; sha256="0pinq57b69lbk44jk2vx53j8662bg2zpb1d47iji6qca8rx6xg9h"; depends=[dplyr ggplot2 progress Rcpp RcppProgress tidyr]; }; + ontoProc = derive2 { name="ontoProc"; version="1.14.0"; sha256="1v6pmp518r6xjid8h9zq0lz8b62s5gjvndc0n4vpn1phlvqiifpp"; depends=[AnnotationDbi Biobase BiocFileCache dplyr DT graph igraph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; }; + openCyto = derive2 { name="openCyto"; version="2.4.0"; sha256="1par1d5pk1rjg15q7i5z5wqma7xg6fycb826a823wk8wr52a885x"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.14.0"; sha256="0z56bln90fcdqmf3f1mmkj7d12d72jx3287ipx6bdc34728rxnk6"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; + openPrimeRui = derive2 { name="openPrimeRui"; version="1.14.0"; sha256="1q7rm4w1vv84jigwighinb7jwdrsn7m7pifra35mg98c22pmagvk"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; + oposSOM = derive2 { name="oposSOM"; version="2.10.0"; sha256="0d8kxyfvy45c6xihh7rzwyc0kgdkb7lwxdl252p3gyzh3bl4548p"; depends=[ape Biobase biomaRt fastICA fdrtool graph igraph pixmap png Rcpp RcppParallel RCurl scatterplot3d tsne XML]; }; + oppar = derive2 { name="oppar"; version="1.20.0"; sha256="1pzxhl6hibv3z2ws0sk71n60d6sfsl71jxii5ajfrx6zli7kr7av"; depends=[Biobase GSEABase GSVA]; }; + oppti = derive2 { name="oppti"; version="1.6.0"; sha256="1rqnvrq2zkizb8vkkpaliy228s7dhznx4qppfsljhl958h8gkich"; depends=[devtools ggplot2 knitr limma pheatmap RColorBrewer reshape]; }; + optimalFlow = derive2 { name="optimalFlow"; version="1.4.0"; sha256="0xjkikyz81dx2n2lx1n0wqwssnk7hiwnd3djhq8f5aaskgim8cq5"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; }; + pRoloc = derive2 { name="pRoloc"; version="1.32.0"; sha256="096x6kgzpbx4xylb330ryiwbh0r347cbv732f5my97g9m3bb2n5p"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="2.2.0"; sha256="0gwgiv91b9rpwiwibhrb1p4bv4qx45jb2xy2mlhlw050z719wc5n"; depends=[Biobase BiocGenerics colorspace colourpicker dplyr DT ggplot2 MSnbase pRoloc scales shiny shinydashboard shinydashboardPlus shinyhelper shinyjs shinyWidgets]; }; + packFinder = derive2 { name="packFinder"; version="1.4.0"; sha256="12ad2wdk2hmwrb6qsqfp6mqfkkc970d9g0jz5bx47g43fdfasc5f"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; }; + padma = derive2 { name="padma"; version="1.2.0"; sha256="15h32pf87ml4rdr6ywbdnb55g7i0ikznvxjlnavpqzx06zdhbpfc"; depends=[FactoMineR MultiAssayExperiment S4Vectors SummarizedExperiment]; }; + pageRank = derive2 { name="pageRank"; version="1.2.0"; sha256="0493w9kanvivhi1r58gyqs5gmc0vz5rvd7hjj4wvrl16ji2pnjsz"; depends=[GenomicRanges igraph motifmatchr]; }; + paircompviz = derive2 { name="paircompviz"; version="1.30.0"; sha256="04v9s3nvcafc2m921sn1s276ng6gs8j7axa9alyxkswgcqcad1c1"; depends=[Rgraphviz]; }; + pandaR = derive2 { name="pandaR"; version="1.24.0"; sha256="1ps1lq14hkpp5p8fwcpz1vqsznrrnlbzn7y4fv7ccymzsk679ijj"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; + panelcn_mops = derive2 { name="panelcn.mops"; version="1.14.0"; sha256="16whxkrvd0xkdiw4pf0azvglxnpwlwqwh3k7spd42kkv0lj9wzm9"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + panp = derive2 { name="panp"; version="1.62.0"; sha256="0a1h0gb8cchh7wf71i63sg8r6cdz794hk7j7a0zgd2kq9mdpfl1a"; depends=[affy Biobase]; }; + parglms = derive2 { name="parglms"; version="1.24.1"; sha256="0vw42bap8vzdxx1bbhqrxyq41pvy2wq1jna9al56bw8zpfbpgj7y"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; + parody = derive2 { name="parody"; version="1.50.0"; sha256="1ff8c1wg9fnjdahzi1v7ddkvwx399awm807bx3c9szxm9dc75xjj"; depends=[]; }; + pathRender = derive2 { name="pathRender"; version="1.60.0"; sha256="12cx9j05hdf9la1nwxllynm82wmsjcyzmgqiil1vp25jr1cfh23i"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; + pathVar = derive2 { name="pathVar"; version="1.22.0"; sha256="0b95g4v58r101aj2q8pnbcv036w1yxi1qy54pw0b5r6383rm8nqd"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; + pathifier = derive2 { name="pathifier"; version="1.30.0"; sha256="1pck2rmbj81hwdilvf30jynkqlwmkx09ac96xmqa0i8d2yald53j"; depends=[princurve R_oo]; }; + pathview = derive2 { name="pathview"; version="1.32.0"; sha256="1fank0qavv9ikmzxvms8mky2wbzny02rfqkvsqzma26r3vl4r1g1"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + pathwayPCA = derive2 { name="pathwayPCA"; version="1.8.0"; sha256="0k4qjypvlgjajvmpgl8jmrcw2czpb2dv69wi5f9pxqy969j2mbhx"; depends=[lars survival]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.26.0"; sha256="0kakb24hvi49z2wk9vlxyry6y85kdky02710rrxd5fwd4nibj1kz"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="2.18.0"; sha256="1ia3kiiv53n4wgj62icmfskiw796cc8yvg2w3lzi60p1yl49306d"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.84.0"; sha256="1ccqsxn487dy92c2d1iffh9917z4zq5ia92zv2h6pi00jjc6ymb5"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcxn = derive2 { name="pcxn"; version="2.14.0"; sha256="1np3gj0i300dm6yc2bg938np6vmhrr0fm287kdhgz3a4m3lx4m6b"; depends=[pcxnData pheatmap]; }; + pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.56.0"; sha256="0a6g5swfjc4mi9b1jamx3m6sb5a5q2r2vzfzn4jfh813z7fg58yz"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + peakPantheR = derive2 { name="peakPantheR"; version="1.6.1"; sha256="02kmkwjsbfwwy6062w8vyp68aqbw77jf9zxq43pqwa2c69hglv8q"; depends=[doParallel DT foreach ggplot2 gridExtra minpack_lm MSnbase mzR pracma scales shiny shinycssloaders shinythemes stringr XML]; }; + peco = derive2 { name="peco"; version="1.4.0"; sha256="03cfndwisy6gmk1779j2m4nslzxpgmb7f8lyrdh8cvgzqpgf13xc"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; }; + pepStat = derive2 { name="pepStat"; version="1.26.0"; sha256="14jivr0jv8r6xpz2ragg5z48ckzvjx7sqnq1bcbbwavf7gcafj64"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; + pepXMLTab = derive2 { name="pepXMLTab"; version="1.26.0"; sha256="1nwhkm626dqrvp3vh10hnr1nvwq3rxcga2ljj547aib919gdax1b"; depends=[XML]; }; + periodicDNA = derive2 { name="periodicDNA"; version="1.2.0"; sha256="0sh4y6gzxchbx43pfrm6ck3idk08zd7f3lw7hc37j6avkp6sj3r6"; depends=[BiocParallel Biostrings BSgenome cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr rtracklayer S4Vectors zoo]; }; + perturbatr = derive2 { name="perturbatr"; version="1.12.0"; sha256="01aa5g1g82rr6lbrjj69jfxgm52l1f6di0fnjbq2yz79hx60ba0g"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; + pgca = derive2 { name="pgca"; version="1.16.0"; sha256="017ljgvn7xms49xnz5r0by4nvhy5q2p0xh5lx1nj32idgxbh5bcc"; depends=[]; }; + phantasus = derive2 { name="phantasus"; version="1.12.0"; sha256="0sfpxlvcgv0blg5n130f6d0l655r05sgz5cfnrmviv1sc2yvf2hd"; depends=[AnnotationDbi assertthat Biobase ccaPP curl DESeq2 fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; + phemd = derive2 { name="phemd"; version="1.8.0"; sha256="13lysbwmw3w69q7js9xzlj01k8ffpqw32r7dvnkifrwfkvdhzdrw"; depends=[Biobase BiocGenerics cluster cowplot ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; }; + phenoTest = derive2 { name="phenoTest"; version="1.40.0"; sha256="13sskjbpk6ncr1h4hxk5wzhp3bhb7mww53rv01psa5254az759c5"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; }; + phenopath = derive2 { name="phenopath"; version="1.16.0"; sha256="187zqqsi4gbvzvbgddrk46s3npih2w0kqq22bdsf9qngyzcz5wxz"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; + philr = derive2 { name="philr"; version="1.18.0"; sha256="0ly13gb3kz3p13grb3kzkm84m3m8f1yb8isjy70kq4isr7vapf85"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; + phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.16.0"; sha256="0fasblqgf5c6j07mj6f3zxb42k87aqkb21fs0f9awpp7shm6k4vh"; depends=[matrixStats plyr]; }; + phyloseq = derive2 { name="phyloseq"; version="1.36.0"; sha256="192gv00xfnv9ljkgb0iw8sqzsay4f3vllyyc1slzsn15713fc4pi"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="2.8.0"; sha256="0zzz72iffxx6j0zpli3rd0fh6k1s7qnsih28102sxnwvj5gv5a7l"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; }; + pickgene = derive2 { name="pickgene"; version="1.64.0"; sha256="0cnqf9cj2hvpi8fwbq48lga6hjv6qs6wpadazr559z9vdybzlbhc"; depends=[MASS]; }; + pipeComp = derive2 { name="pipeComp"; version="1.2.0"; sha256="1gfcnw9chm5r8s0lam4vkx75hbhrh37gw616irr40p8lc30kk0r7"; depends=[aricode BiocParallel circlize clue cluster ComplexHeatmap cowplot dplyr ggplot2 intrinsicDimension knitr Matrix matrixStats randomcoloR RColorBrewer reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment SummarizedExperiment uwot viridisLite]; }; + pipeFrame = derive2 { name="pipeFrame"; version="1.8.0"; sha256="04jcwcliv0vjmgj0w0wyh7kdxz40dg7s7916d96bgmkirb1yr19j"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr visNetwork]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.58.0"; sha256="1i02ifg562k20p28l6cm4l28c9j0iqlly1ii50zm5872nqpqz42q"; depends=[graph RBGL]; }; + planet = derive2 { name="planet"; version="1.0.0"; sha256="0ajaa066fahfjv2k49sira4gyggxi699hvz8xl50y7a1xbvjir8p"; depends=[dplyr magrittr tibble]; }; + plethy = derive2 { name="plethy"; version="1.30.0"; sha256="1ncjmlnrjhqqnsfp191bwa4gnvbs1n8gji83f2cwvjlbiad7jl7k"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plgem = derive2 { name="plgem"; version="1.64.0"; sha256="1rz5jk5bgpk7gjknx79jyslahjg46q2f4bx6dgd0vwmarc29a45z"; depends=[Biobase MASS]; }; + plier = derive2 { name="plier"; version="1.62.0"; sha256="1n2g7nm36i86v00nb6zkfkr7b8ns0mw6wqz0381bxwzpvvsb48dl"; depends=[affy Biobase]; }; + plotGrouper = derive2 { name="plotGrouper"; version="1.10.0"; sha256="1sq7hly0y4lx2fpxdswq2s3pjkfxssna3jiklr5dpc9241cfsxjg"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; + plyranges = derive2 { name="plyranges"; version="1.12.1"; sha256="0ws6m6mq69bj16kwr812z0sgwhj0mxyh19bc9qyfka1pwpkabm6m"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; }; + pmm = derive2 { name="pmm"; version="1.24.0"; sha256="0hd2w76qdb6hibs9xhxima3s6dk6kf0vvd3hs7xyxdbwcmhz3ka6"; depends=[lme4]; }; + pmp = derive2 { name="pmp"; version="1.4.0"; sha256="1lfbf4y02bq9kkw8bikf7v1n0zsqd4ncn3r4fm9hzfvzrsdcrz10"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; }; + podkat = derive2 { name="podkat"; version="1.24.0"; sha256="033lkq9h6qw3yyr8zv63jsyrm21kswngz538szjbpvky0x4avakf"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; }; + pogos = derive2 { name="pogos"; version="1.12.2"; sha256="008kp86wibbj5sd4814s4056ayk1aldapbvcxn775pw3rdki0rxl"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; + polyester = derive2 { name="polyester"; version="1.28.0"; sha256="0f7hp7f42j0k12xhxg4zvsnhakn8xrs0iv0kqanyvjd0krxf6nf0"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; + powerTCR = derive2 { name="powerTCR"; version="1.12.0"; sha256="1il4xh3njgh2z0gdwkzpcyzrd8q0sbvlfsxb87lskf0rsqmzvvmj"; depends=[cubature doParallel evmix foreach magrittr purrr truncdist vegan VGAM]; }; + ppcseq = derive2 { name="ppcseq"; version="1.0.0"; sha256="0ba8qh4rdhydi5a99q7g0c9gdn72wzby9is968x88g1ax17bwmyc"; depends=[benchmarkme BH dplyr edgeR foreach furrr future ggplot2 lifecycle magrittr purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidybayes tidyr]; }; + ppiStats = derive2 { name="ppiStats"; version="1.58.0"; sha256="1gwffsjpgcxrl43n0knvzwh10fsdlra9p4q585s0s865qmhakf3y"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; + pqsfinder = derive2 { name="pqsfinder"; version="2.8.0"; sha256="0nk08x0l4xisbwkp2nc8rb3l5xgcah5xmaypws4s1y8ak4q3nqf3"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; + pram = derive2 { name="pram"; version="1.8.0"; sha256="1g60hy6ia563ajivrj9fqzv0ql7cnyw6ggf3j5s4xm47s9ddymb8"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; + prebs = derive2 { name="prebs"; version="1.32.0"; sha256="17xnphbrx538wywfzisagrdqqxf8gi8bia50n57finclm9bj22jf"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + preciseTAD = derive2 { name="preciseTAD"; version="1.2.0"; sha256="15f34jk29fbsmjgcixkbyga5xm49lpyxsppafr7lawxnv80fkzy5"; depends=[caret cluster dbscan doSNOW e1071 foreach GenomicRanges IRanges ModelMetrics pbapply pROC PRROC randomForest S4Vectors]; }; + predictionet = derive2 { name="predictionet"; version="1.38.0"; sha256="0ygxkby1s54jxybsrh4xwi9jnp3r6cc98rn01qzlav1qnqavmhy1"; depends=[catnet igraph MASS penalized RBGL]; }; + preprocessCore = derive2 { name="preprocessCore"; version="1.54.0"; sha256="17a00blz4kvhmsk92bp5alj9kdpy7h1id7nk4vqxakhkb2jabr20"; depends=[]; }; + primirTSS = derive2 { name="primirTSS"; version="1.10.0"; sha256="1bmskpidn16s5m44xjhz5phpmffsgp482r7dfjh6xx91csy82kc7"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; + proActiv = derive2 { name="proActiv"; version="1.2.0"; sha256="1rrvq4z05rk7kxrh4v3vikws9v62mvy7bqfirkwv5mgv90i0ipc6"; depends=[AnnotationDbi BiocParallel data_table DESeq2 dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges rlang S4Vectors SummarizedExperiment tibble]; }; + proBAMr = derive2 { name="proBAMr"; version="1.26.0"; sha256="07nv5b3dlm5wb5gs65ky4fxbpxwgxq0rgn73lgcaxha9ccmws2jp"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; + proBatch = derive2 { name="proBatch"; version="1.8.0"; sha256="1vf126w2vwc7aaw3h3bzd6h3ll81615mbmi0svlqghzch19x9nc4"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; }; + proDA = derive2 { name="proDA"; version="1.6.0"; sha256="1p34fj037rq4x1x41lxh5qn0wi92ykdd7az4q0zj0rz53hmklr8m"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; }; + proFIA = derive2 { name="proFIA"; version="1.18.0"; sha256="00caarlcxfk8b2f6q001bafv9gx546flfxq0kgjv802dca2rdpjv"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; + procoil = derive2 { name="procoil"; version="2.20.0"; sha256="0j38p3qr0zadam0zgi45z2bm4xspxczxknq7pbs2sza6xsvjcbkz"; depends=[Biostrings kebabs S4Vectors]; }; + profileScoreDist = derive2 { name="profileScoreDist"; version="1.20.0"; sha256="15y76zyqslcmw0vdqngp2gl6dizaf7ihlf30apjj54z478cyhz5k"; depends=[BiocGenerics Rcpp]; }; + profileplyr = derive2 { name="profileplyr"; version="1.8.1"; sha256="09f5c60cyg6hn6d5d4s8l1z9sknv3chw6cvpgbrkmvmafm4namkg"; depends=[BiocGenerics BiocParallel Cairo ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rlang Rsamtools rtracklayer S4Vectors soGGi SummarizedExperiment tidyr tiff TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; }; + progeny = derive2 { name="progeny"; version="1.14.0"; sha256="10vpjvl4wps857xiy8rpzr82jzdfbc5rgwh3ir3my26lfws4hfz8"; depends=[Biobase dplyr ggplot2 ggrepel gridExtra tidyr]; }; + projectR = derive2 { name="projectR"; version="1.8.0"; sha256="0c7vi6x8jdwpl6pcih1r9kdwrjjjf7swyx124c2w2fq2f115qp07"; depends=[cluster CoGAPS dplyr ggalluvial ggplot2 limma NMF RColorBrewer reshape2 ROCR scales viridis]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.32.0"; sha256="1rkl5v7marwxs7069hhsvp69inlpvbklpgzn58yfsk47d7ljrhhr"; depends=[]; }; + psichomics = derive2 { name="psichomics"; version="1.18.5"; sha256="1a7mmjy7p05xcjdnq6xvs334xmjcfxjhha5xjvnabkpnsy55qv03"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma pairsD3 plyr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.24.0"; sha256="185z387cdipac0sljgfx3xc39sv4p7f26amaw5lfnf822ibmhf5d"; depends=[BgeeDB Biobase biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; + ptairMS = derive2 { name="ptairMS"; version="1.0.0"; sha256="1kpa6j6qwikjgfjkvkg8klq8yqwkqwkb9l7mribp1ijvpwak0w39"; depends=[Biobase bit64 chron data_table doParallel DT enviPat foreach ggplot2 ggpubr gridExtra Hmisc minpack_lm MSnbase plotly Rcpp rhdf5 rlang scales shiny signal]; }; + pulsedSilac = derive2 { name="pulsedSilac"; version="1.6.0"; sha256="1vvcrd38v1x602z72hxvbb66xg1r6p2a1izmkivdifkzy0i5m1vl"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment taRifx UpSetR]; }; + puma = derive2 { name="puma"; version="3.34.0"; sha256="0bqc37bj2hmwjiri5x2x0pahhvz1zaqaphandv6v3zjrabgv60dm"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.40.0"; sha256="1qdi6m2xdk751xkdxbm9wk16x5r2j8diggr7h4x953wwgc9wfi3m"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.32.0"; sha256="0kax1szfb1d869xkmvylwfcy0acisvkhgvgwm1z4nd2gmg252655"; depends=[Biobase lme4 Matrix vsn]; }; + pwOmics = derive2 { name="pwOmics"; version="1.24.0"; sha256="0rybmc70vwwhlhxcbalxw2iywzxchynbc39kig4cy33nb8hamzzk"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; + pwrEWAS = derive2 { name="pwrEWAS"; version="1.6.0"; sha256="0kzkq2yf9z6wqn38kanf0axy9i522yi65qwr2xpgw6p3j6ng85ld"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; }; + qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.10.0"; sha256="02ryj0gn4ks9rchx5xg5lfyyrprkzjfghrmgf0hbjsar54d8yy1k"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer readr rlang scales stringr tibble tidyr tidyselect]; }; + qckitfastq = derive2 { name="qckitfastq"; version="1.8.0"; sha256="17vclhgbvhyl427pp5yhjkkdn0psplxa89kggvpcn5v4dzxwd9a6"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.30.0"; sha256="0vz5wpan18kavsm5kynjcriklp407icnb3bcbx36mh3rrhv6nbsq"; depends=[Biobase knitr pander S4Vectors xtable]; }; + qpcrNorm = derive2 { name="qpcrNorm"; version="1.50.0"; sha256="0ijvp0j4rl0r0mg7kb483hayqsl0lj5fmfwm888sqlymbxdqij35"; depends=[affy Biobase limma]; }; + qpgraph = derive2 { name="qpgraph"; version="2.26.0"; sha256="0m1kcdjs4vilyb8yiqck62h47yjfalydz62gjm3nb1j1pqyq5m14"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qrqc = derive2 { name="qrqc"; version="1.46.0"; sha256="0bhk4sj815hdgrpk8jyw01pjdlvnd2rhq8as5s3yk3i5zzwd7f1v"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; }; + qsea = derive2 { name="qsea"; version="1.18.0"; sha256="0qs7f5yrszyimb2lx8kl374svx8yv5bnpjkwgrqbx9lr4ix7jc33"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges KernSmooth limma MASS Rsamtools rtracklayer zoo]; }; + qsmooth = derive2 { name="qsmooth"; version="1.8.0"; sha256="13fryldfkbkralm58z4c48slh8d9ckk2h95pvl3s0z9w1i67jf87"; depends=[SummarizedExperiment sva]; }; + quantiseqr = derive2 { name="quantiseqr"; version="1.0.0"; sha256="0701msl79asnqmss3ci7jnir5a01g50lbyxhkd5p9cj7a2l8qymd"; depends=[Biobase ggplot2 limSolve MASS preprocessCore rlang SummarizedExperiment tidyr]; }; + quantro = derive2 { name="quantro"; version="1.26.0"; sha256="1fkma2ic448h2lrlza8ipg65gpfsz4fhlxcnjpmzhhmzp2xi2p4a"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + quantsmooth = derive2 { name="quantsmooth"; version="1.58.0"; sha256="0nq0khip6v67g3d3gyzg18xwhfxz34l8vmki1p8m9rqa1iq0i43x"; depends=[quantreg]; }; + qusage = derive2 { name="qusage"; version="2.26.0"; sha256="1rg8y5jqw1ckhmqvg4k4di4l4hf8cvmaq3wzvhb2l2fqkl4zhjh7"; depends=[Biobase emmeans fftw limma nlme]; }; + qvalue = derive2 { name="qvalue"; version="2.24.0"; sha256="0xssanffh1hr7f48mnazcpwi25rdp7mxlyb9nbf4q2mp7m40jnpm"; depends=[ggplot2 reshape2]; }; + r3Cseq = derive2 { name="r3Cseq"; version="1.38.0"; sha256="023xwqsc1da4sdvnlhakb7mj8wab9rvg592zy1rxz51j2hwwhkx0"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.32.0"; sha256="02pgrklln1srfzq907sk1h543in7vs6zpwfq46kxq0xhr40ryd20"; depends=[data_table XML]; }; + rCGH = derive2 { name="rCGH"; version="1.22.0"; sha256="039zks8h1dgrr9gmk2gb7rxvjb27j532klbak1c2z2j1a138cvhc"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + rDGIdb = derive2 { name="rDGIdb"; version="1.18.0"; sha256="1nanh1gnsd7wgi4pm4jw17agqk3c3yaqcay9dxl6symz685f84br"; depends=[httr jsonlite]; }; + rGADEM = derive2 { name="rGADEM"; version="2.40.0"; sha256="05drbhjqn5kik6k4h03vr3d2b6pv5rm65lsnkyx4caxxcdii4jzm"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; }; + rGREAT = derive2 { name="rGREAT"; version="1.24.0"; sha256="0ads9c9i8b39wvjih057zlyivj8zpsqjxf6r97yflz4sbi1jmcji"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rRDP = derive2 { name="rRDP"; version="1.26.0"; sha256="0a6j8786njbx7ja5053xzr40iqif2vm6zq9qxwm7mmk0k6dh2nm6"; depends=[Biostrings]; }; + rSWeeP = derive2 { name="rSWeeP"; version="1.4.0"; sha256="0p9743kpk3xabq698yb5xwj6m6v193zvm0b7ddg4h3d6nzz45k6p"; depends=[pracma]; }; + rScudo = derive2 { name="rScudo"; version="1.8.0"; sha256="1wqrzgj595h7agp3hm5zgnig7f6cmw6y0aq0msq9w8rm97n6nyrp"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; }; + rTRM = derive2 { name="rTRM"; version="1.30.0"; sha256="1j127s66mqillmy09h8asdmif043w1yjqzyfq70k5gcz3qr69kyd"; depends=[AnnotationDbi DBI igraph RSQLite]; }; + rTRMui = derive2 { name="rTRMui"; version="1.30.0"; sha256="081x7ym8cnnhdff4dfxpwypk04fwg7d2w5b58kcr9fqb4d0vx72k"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; + rWikiPathways = derive2 { name="rWikiPathways"; version="1.12.0"; sha256="12s4zd6qkvs2van7k34i5w7zd18c5bn72gbwyk3g6dsq84h6h5h7"; depends=[data_table httr RCurl rjson tidyr XML]; }; + rain = derive2 { name="rain"; version="1.26.0"; sha256="1llzn7dhhj38mr36bzy063vg2rgbrhpx4pzkcnc86psrfbh2b786"; depends=[gmp multtest]; }; + rama = derive2 { name="rama"; version="1.66.0"; sha256="19as3qxcvkqb9ly9jvp1hy7avdyarbvavhsvzykf29rna7lz6s9g"; depends=[]; }; + ramr = derive2 { name="ramr"; version="1.0.3"; sha256="1zind0908rqkb6f6i5224ygzpl5spaka332x8dxby699k4hgjbpl"; depends=[BiocGenerics doParallel doRNG EnvStats ExtDist foreach GenomicRanges ggplot2 IRanges matrixStats reshape2 S4Vectors]; }; + ramwas = derive2 { name="ramwas"; version="1.16.0"; sha256="0jdiaxi1ddbbyjkbi0wv5gzw8q2z7d1l18qcqjwll48ml34a5f88"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; + randPack = derive2 { name="randPack"; version="1.38.0"; sha256="1223g4971gizsq6vd0hkgjkg3192c7z9xc9fpcnq06913q4gv78d"; depends=[Biobase]; }; + randRotation = derive2 { name="randRotation"; version="1.4.0"; sha256="0x4gji435lh1l8ncss953qq4q33ygbqjnqbasy664sajhqwfaqv9"; depends=[Rdpack]; }; + rawrr = derive2 { name="rawrr"; version="1.0.3"; sha256="1i6lrb8lmyzan6g3i9cycw71s31z5d4szsmc1iq4q3xk98kavwff"; depends=[]; }; + rbsurv = derive2 { name="rbsurv"; version="2.50.0"; sha256="0x4v1byb44pgfrl3dj30yx6gxi8gfyjicd128nii8ch9rhhxnjl9"; depends=[Biobase survival]; }; + rcellminer = derive2 { name="rcellminer"; version="2.14.0"; sha256="091vsjjq3zwn7g39zx43f0jkqh5x89bm0k93a6dzi5l2drf3nb3h"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; }; + rebook = derive2 { name="rebook"; version="1.2.1"; sha256="1z597559a26lzgs1gy2cns4gqy4dfpx3anlfshxdr2y48dwrg3h1"; depends=[BiocStyle CodeDepends dir_expiry filelock knitr rmarkdown]; }; + receptLoss = derive2 { name="receptLoss"; version="1.4.0"; sha256="17fpvpz73f6h650sbfvnvvcmabxxzjg134msfidff35n63j7jkkn"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; }; + reconsi = derive2 { name="reconsi"; version="1.4.0"; sha256="0bpfxhbgrxf84qxzz7w4spxm91m34n8ghigf1l78hdsin98x8zy0"; depends=[ggplot2 KernSmooth matrixStats phyloseq reshape2]; }; + recount = derive2 { name="recount"; version="1.18.1"; sha256="0lkanj072r7vz95cp90chrb3kfgkkvsd8bvvizvw4rasfljbb01d"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; + recount3 = derive2 { name="recount3"; version="1.2.5"; sha256="12wzryyw46hbd0yimrdnh72j01rih444wdczc2482h3k3c78hkjc"; depends=[BiocFileCache data_table GenomicRanges Matrix R_utils RCurl rtracklayer S4Vectors sessioninfo SummarizedExperiment]; }; + recountmethylation = derive2 { name="recountmethylation"; version="1.2.0"; sha256="1hljsx0q1c64ghdagfz217klkd43vn6wxx9cfm7aydxgj1qz98h5"; depends=[BiocFileCache HDF5Array minfi R_utils RCurl rhdf5 S4Vectors]; }; + recoup = derive2 { name="recoup"; version="1.20.0"; sha256="1h2s7h5nhkcjxy4j9w95ydp3iaiqb0bp08fkxx5v5nf7fjvjnyxl"; depends=[BiocGenerics biomaRt Biostrings circlize ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 httr IRanges Rsamtools RSQLite rtracklayer S4Vectors stringr]; }; + regionReport = derive2 { name="regionReport"; version="1.26.0"; sha256="044hwavvi4mp6j6sxjsdm88dbzxjg4p18qw4y0bp2zsj9swf8ffc"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.24.0"; sha256="0xzzaz3cl6pyxfsg0d931v8k15wbd05s5mnsb7igxldc5qqg3nsl"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; + regsplice = derive2 { name="regsplice"; version="1.18.0"; sha256="0vnq82xhj9401j17zb0p40ls6aqwng7ganllkblkh744bqlqrbd6"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; + regutools = derive2 { name="regutools"; version="1.4.0"; sha256="0l8w0qawz0hfp6blshnx6r76ccgal7vc3g4vm0idc6f2s0fvy0hm"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; }; + restfulSE = derive2 { name="restfulSE"; version="1.14.2"; sha256="1kqjzi76v4vla11g8vp5wdasgpz2wb82lfbp7j58jh13vipdycgl"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; + rexposome = derive2 { name="rexposome"; version="1.14.1"; sha256="0r70picz7id60ypcpzdm0jg4yrxmwwxsqw6brm732wf634r78l4y"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; + rfPred = derive2 { name="rfPred"; version="1.30.0"; sha256="1pv3rchf38kvds3bk0y8v7wwx6pcky3nzc2d4d8pz6ppcmqs5174"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; + rfaRm = derive2 { name="rfaRm"; version="1.4.3"; sha256="096ifcp7ic9hfj2z2mnkpv5xnl4hcryyl25wq7brbs6rqd9ym7sv"; depends=[Biostrings data_table httr IRanges magick rsvg rvest S4Vectors stringi xml2]; }; + rgsepd = derive2 { name="rgsepd"; version="1.24.0"; sha256="196ngkx02q912xsns30q8if8002ic3r8ymrg1k7z90b4d3dz0ywr"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.36.0"; sha256="1a5kw9ry9cr258al0x3q0ss5xn1ymscdypx51vzzgzamhy7dqakz"; depends=[rhdf5filters Rhdf5lib]; }; + rhdf5client = derive2 { name="rhdf5client"; version="1.14.2"; sha256="10lsijall2mvwnbfzgfbdnzh0fcii22qlvk0530rbggpp2l4lwkz"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; + rhdf5filters = derive2 { name="rhdf5filters"; version="1.4.0"; sha256="133v0s452acspi4dbf6gsa2xrr0qza86jdjjbpwhdv6zfd1djbgc"; depends=[Rhdf5lib]; }; + riboSeqR = derive2 { name="riboSeqR"; version="1.26.0"; sha256="1m5w2j35wr0lzwir4s58z757vrcsj5mglsqrkvs241k0hlmn06qa"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; + ribor = derive2 { name="ribor"; version="1.4.0"; sha256="1q534sg3iivkmgipa74bkqsfc10zvcb707r8wmlmpg3735za24xg"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; }; + ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.4.0"; sha256="1qgjixj8vqnw5a4ycd75m9d1vcny0vd72h10nmhh2c8rjnifdryf"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales XVector]; }; + rmelting = derive2 { name="rmelting"; version="1.8.0"; sha256="1308sf6lib6ll04mll7iycnh123sjj09kmazicg9cfd1jcp17g01"; depends=[Rdpack rJava]; }; + rnaEditr = derive2 { name="rnaEditr"; version="1.2.0"; sha256="0832569shfpbq06b0bmjzy5xf9z6gahpq178z4hypbnnmwvjip8z"; depends=[BiocGenerics bumphunter corrplot GenomeInfoDb GenomicRanges IRanges logistf plyr S4Vectors survival]; }; + rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.22.0"; sha256="0xhak5wmah6i1fpcz70d2blphhyxzyyah8lvgbylrmy0xmdfasbm"; depends=[RColorBrewer]; }; + roar = derive2 { name="roar"; version="1.28.0"; sha256="0vp0n90rvjm8rzwkbrxa3fasb9val56bz2srz72xwsl3jzb5yk6w"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.20.1"; sha256="156ysd39zl20zzw7wsv70cngs75yiv3w90i365l2rjhqvqkya63b"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.24.0"; sha256="1j99kdywyljqzdcns5ysh590w4w8iiwzpddpfk5c8d4whax7vk5b"; depends=[Biobase MultiDataSet]; }; + rpx = derive2 { name="rpx"; version="2.0.3"; sha256="0yp9d5cbs6z510bylydwpz6r02rn755ida7vvvda1fhh3q061r0f"; depends=[BiocFileCache jsonlite RCurl xml2]; }; + rqt = derive2 { name="rqt"; version="1.18.0"; sha256="011qmbbgnaas3j8077x8yghz6249v11zz5ic6bj3yndfqxsx327i"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; + rqubic = derive2 { name="rqubic"; version="1.38.0"; sha256="1jhawn72s5h2pfbyhlc0yldmc9wbdwrb5iwib7mkagj2mwwfsp32"; depends=[biclust Biobase BiocGenerics]; }; + rrvgo = derive2 { name="rrvgo"; version="1.4.4"; sha256="0h77mzr792dhjb410c32g6fhivl8786v88pbcpbbkdqcwnxfxny0"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap wordcloud]; }; + rsbml = derive2 { name="rsbml"; version="2.50.0"; sha256="017xwra6ms7kx6sg3ksw1vr9zn23imc2qjgpmjikx7mgbak125xh"; depends=[BiocGenerics graph]; }; + rsemmed = derive2 { name="rsemmed"; version="1.2.0"; sha256="10rzf1hh0vpc9mhvzmhl75cinfr13qnjsqdf47pk0rg19wdw6021"; depends=[dplyr igraph magrittr stringr]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.52.1"; sha256="11w6dx09pb49lin1gr9q88xn7ixh9jd5z6m9z27djchm0nw10lx9"; depends=[BiocGenerics BiocIO Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl restfulr Rsamtools S4Vectors XML XVector zlibbioc]; }; + runibic = derive2 { name="runibic"; version="1.14.0"; sha256="0xk7038h56l1im6akqj6bph7b19z1imikp9pbnpxr2nvk5xpbl78"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; + sRACIPE = derive2 { name="sRACIPE"; version="1.8.0"; sha256="03xj1i0wp79l3nb5fh9jlw7vrnccp167zx6dg49p690rsxyzbik4"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; }; + sSeq = derive2 { name="sSeq"; version="1.30.0"; sha256="0pcc18sgd28vhqgq9wz71dn8s7bfzq738qvgzxyyr995m9k8dqzk"; depends=[caTools RColorBrewer]; }; + safe = derive2 { name="safe"; version="3.32.0"; sha256="058xya9g61gskcfv3vxwadszpkvhkiip6vdn4rpaf2jf07k5fwlr"; depends=[AnnotationDbi Biobase SparseM]; }; + sagenhaft = derive2 { name="sagenhaft"; version="1.62.0"; sha256="0hgb9zyzcxcjcqlch3hax3rvvk2p0k3bqfbfbdd4vg43vf9f8119"; depends=[SparseM]; }; + sampleClassifier = derive2 { name="sampleClassifier"; version="1.16.0"; sha256="0499k1959hls94f59cc0w0mcg7j8hb5xrp5sn5d3kmv5b3b104zx"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; + sangeranalyseR = derive2 { name="sangeranalyseR"; version="1.2.0"; sha256="1mpakmwm5gng05wvnfrb5w2z64ihq40wvr865mq3lrl1xvfhpj3h"; depends=[ape BiocStyle Biostrings data_table DECIPHER DT excelR ggdendro gridExtra kableExtra logger openxlsx phangorn plotly reshape2 rmarkdown sangerseqR seqinr shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr zeallot]; }; + sangerseqR = derive2 { name="sangerseqR"; version="1.28.0"; sha256="0bsm027bqyr3b7c2fd7j7bzaklbsbp7bwn4343xxbzlwjdvp3ywc"; depends=[Biostrings shiny]; }; + sarks = derive2 { name="sarks"; version="1.4.0"; sha256="073hhbvc67lvxa33i3fyxvh5ncr2b78j2b4xck4glwdqkbrdx0rf"; depends=[binom Biostrings cluster IRanges rJava]; }; + satuRn = derive2 { name="satuRn"; version="1.0.0"; sha256="08gccrx8gp89q34n8ayag8j2bvq49p94b5cpfqvjpp5bbaq5npgf"; depends=[BiocParallel boot ggplot2 limma locfdr Matrix pbapply SummarizedExperiment]; }; + savR = derive2 { name="savR"; version="1.30.0"; sha256="1ynp334hm76zf05j4f6vha6r16s5f2ncxx9yviq4rxidk9r723jq"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; + scAlign = derive2 { name="scAlign"; version="1.6.0"; sha256="0g1gmb2fy9yrirsnzlqf02vapzcp3569fbcq6cjm0xggv7r07a9j"; depends=[FNN ggplot2 irlba purrr Rtsne Seurat SingleCellExperiment tensorflow]; }; + scBFA = derive2 { name="scBFA"; version="1.6.0"; sha256="19jwlp4pym307xxyabnn0vwcya45kjvb0wcr5gl3adfj1wsbrm20"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; }; + scCB2 = derive2 { name="scCB2"; version="1.2.0"; sha256="1w311bg8xhvgm49z9l1p9y50gr3q8z4hixv7vdwfgr067pivz5f8"; depends=[doParallel DropletUtils edgeR foreach iterators Matrix rhdf5 Seurat SingleCellExperiment SummarizedExperiment]; }; + scClassifR = derive2 { name="scClassifR"; version="1.0.0"; sha256="09gfr3yf3wvxiaz4s2bnmxm3khmhwa0zcqxnblgwszg393nawgrh"; depends=[ape caret data_tree dplyr e1071 ggplot2 kernlab pROC ROCR Seurat SingleCellExperiment SummarizedExperiment]; }; + scClassify = derive2 { name="scClassify"; version="1.4.0"; sha256="1lfspdc3n6cz0w2arqncsafrf0py0v30kv3shvsl596g2dxc1109"; depends=[BiocParallel cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; }; + scDD = derive2 { name="scDD"; version="1.16.0"; sha256="1dw9m3m99apmbs32461c6lnmy81n5hxbhz3p8jk419gajkh4v1ji"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; + scDataviz = derive2 { name="scDataviz"; version="1.2.0"; sha256="0rah7rmybq2qbs1yr9aw74pqqbs8j0ga5jq83jvdnf9b4fql6gvj"; depends=[corrplot flowCore ggplot2 ggrepel MASS matrixStats RColorBrewer reshape2 S4Vectors scales Seurat SingleCellExperiment umap]; }; + scDblFinder = derive2 { name="scDblFinder"; version="1.6.0"; sha256="1xazz2yzima2igpygyvrsjsbjayk58vxrg2cra0zm0mzam5rda1v"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray igraph Matrix mbkmeans S4Vectors scater scran scuttle SingleCellExperiment SummarizedExperiment xgboost]; }; + scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.12.0"; sha256="03v7hsql5zy5s55g77acsbk2v9w4kmsvdm5m0mxj0x94gybik04b"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; + scGPS = derive2 { name="scGPS"; version="1.6.0"; sha256="0d17nxc3w9cn8h0nw0viv0114zfh9s2plmyhyf6f8pz84m6q16hi"; depends=[caret DESeq2 dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; }; + scHOT = derive2 { name="scHOT"; version="1.4.0"; sha256="0g6i7ab9rz9a6jwhqihlp3hvraqzz54shjddqwjsr7a029bmd1pv"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scMAGeCK = derive2 { name="scMAGeCK"; version="1.4.0"; sha256="1pya8hlfm7s4sjd9b4sz7nwk1ci2zw4na6q9mrb07fa4j5d1hbcn"; depends=[Seurat]; }; + scMerge = derive2 { name="scMerge"; version="1.8.0"; sha256="1gp5x3vac0yp6qhcikkrvip0n2b17gmkl4vng0rz4zcr2isdrmpv"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr igraph M3Drop pdist proxy ruv S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scPCA = derive2 { name="scPCA"; version="1.6.2"; sha256="0n2hf4bx36j7y02r4m0q29c1d42dlkqc9h98d0y9mvjd51z0vmnn"; depends=[assertthat BiocParallel cluster coop DelayedArray dplyr elasticnet kernlab Matrix MatrixGenerics matrixStats origami purrr Rdpack RSpectra ScaledMatrix sparsepca stringr tibble]; }; + scPipe = derive2 { name="scPipe"; version="1.14.0"; sha256="0r2px7ndswbkjls1h4ddaa9lhgxc8y1z8823pvb760jcl9fdijyk"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hash magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib rlang robustbase rtracklayer S4Vectors scales scater SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; }; + scRecover = derive2 { name="scRecover"; version="1.8.0"; sha256="0bmyzf5bghyy3ac9pj0hmh0zbcdsp7wrakf8ky0gi6vzpw359szh"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl Rmagic rsvd SAVER]; }; + scRepertoire = derive2 { name="scRepertoire"; version="1.2.0"; sha256="0vl55zwr7xsy5bq58nkvdk0mp5k53qnvzva1q8973dii6aa8y1sw"; depends=[Biostrings doParallel dplyr ggalluvial ggplot2 plyr powerTCR reshape2 rlang stringr SummarizedExperiment vegan]; }; + scTGIF = derive2 { name="scTGIF"; version="1.6.0"; sha256="0m73b2ixwknsdvarskbg0s9wb6kabcn8zjds6pafd0xblsam4r1f"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; }; + scTHI = derive2 { name="scTHI"; version="1.4.0"; sha256="0ahjiicpxwg6jrf2jgq8hkfja8ri4w20zvdhn9w9f3h51irlpymg"; depends=[BiocParallel Rtsne]; }; + scTensor = derive2 { name="scTensor"; version="2.2.0"; sha256="03pdjmwdcylbvn03qyjirw2hsizlgmh200rb71fkza5z4qs1c2yx"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; }; + scater = derive2 { name="scater"; version="1.20.1"; sha256="1046fgf93dda3y2z5ilrjdczz7klj67ag63p4p1h03965wpj9vfn"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 gridExtra Matrix RColorBrewer rlang Rtsne S4Vectors scuttle SingleCellExperiment SummarizedExperiment viridis]; }; + scde = derive2 { name="scde"; version="2.20.0"; sha256="09pdxbafnkjb2lydi41p8shf9jrva5nl4jldm5y8gp2g7kxnr5wv"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; + scds = derive2 { name="scds"; version="1.8.0"; sha256="001y6jlqi5nrfblwfl958jj5f34rzsmil0jicinx6rn8yxp02xl5"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; }; + schex = derive2 { name="schex"; version="1.6.3"; sha256="0fvyan2sisn1nqa87wn8xx8ip9c9kz4fc92p1fzdl5xshli8qcka"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin scales Seurat shiny SingleCellExperiment]; }; + scmap = derive2 { name="scmap"; version="1.14.0"; sha256="1m7iy7y089az9r34lrx06vq34ygpf7by1y5011f7w9xp1rjf6yxj"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scmeth = derive2 { name="scmeth"; version="1.12.0"; sha256="0mirify0s552psnfam5vc6w4nxwj73zyiasr6fmbsrg3bqp9dj6x"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; + scone = derive2 { name="scone"; version="1.16.1"; sha256="0zw8g4mql7b02xqwhc1i0bnhm20c1q9xqc7yz84j98pqbi996vi5"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma MatrixGenerics matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SingleCellExperiment SummarizedExperiment]; }; + scoreInvHap = derive2 { name="scoreInvHap"; version="1.14.0"; sha256="0j8cgjrslyylnk9l027ydskx8wl7f7xgnngk7g45j2iq3km5kxxi"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; + scp = derive2 { name="scp"; version="1.2.0"; sha256="14mc1l35vdzy6z3vnvm2mb598qh7p1izrns9mfkwa91zci4528rg"; depends=[dplyr magrittr matrixStats MsCoreUtils MultiAssayExperiment QFeatures rlang S4Vectors SingleCellExperiment SummarizedExperiment]; }; + scran = derive2 { name="scran"; version="1.20.1"; sha256="0ilzp6ngw9pq88gk79iic2zxfh5jaic6lnq3xfwc9a269bjylff0"; depends=[beachmat BH BiocGenerics BiocParallel BiocSingular bluster DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix metapod Rcpp S4Vectors scuttle SingleCellExperiment statmod SummarizedExperiment]; }; + scruff = derive2 { name="scruff"; version="1.10.0"; sha256="0p60lzj51yp1p67b8y4xlqj9gh3z9sn53czdld4bvnqwzgwq5fnq"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; + scry = derive2 { name="scry"; version="1.4.0"; sha256="1lw5zqi8rygk3455ahilmcd75pidvjff45fryjbc9bkh935r3ish"; depends=[BiocSingular DelayedArray glmpca HDF5Array Matrix SingleCellExperiment SummarizedExperiment]; }; + scuttle = derive2 { name="scuttle"; version="1.2.1"; sha256="015k879gg2r39lp6mz26jwmysa56k0ial6v74zzmbi8hnz9zic3i"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats GenomicRanges Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; }; + sechm = derive2 { name="sechm"; version="1.0.0"; sha256="1fs18d7w277cz7vabfg4p4jmz7hmz61idi22cn9x0qdb2qy7lqas"; depends=[circlize ComplexHeatmap randomcoloR S4Vectors seriation SummarizedExperiment]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.26.0"; sha256="1fqv0k3hhrm3779sk0vzhmrz2r39zj5x8lzaiwfqamim0s4zvqgr"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + selectKSigs = derive2 { name="selectKSigs"; version="1.4.0"; sha256="04g0hrcc0kqlkj3f31yd9fxq216r5jknvbfn1x2153s0v11i7ys9"; depends=[gtools HiLDA magrittr Rcpp]; }; + semisup = derive2 { name="semisup"; version="1.16.0"; sha256="19cvnbshk6qyxb001m2nrzlnc5v1n3lcpr79bka0lavmsi1wqa62"; depends=[VGAM]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.24.0"; sha256="1wa1aqczdjw03q77j923xwk32ljlqawnwl6z1vddmz731fk1ddpz"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCAT = derive2 { name="seqCAT"; version="1.14.0"; sha256="18ammsypfxqdrdz0h9i1s9hkdn0m42v4vszaqp4jvnhzw306mnv3"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; + seqCNA = derive2 { name="seqCNA"; version="1.38.0"; sha256="07n21a6ini41yalhab049xi7ibx7nbp7pjyvpngqjjjnfy8z6l2k"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; + seqLogo = derive2 { name="seqLogo"; version="1.58.0"; sha256="1253sj1hc6bbrff0iv5xa3v9znqvisll0fy6fdjka9c778fn4mcp"; depends=[]; }; + seqPattern = derive2 { name="seqPattern"; version="1.24.0"; sha256="0h74z84zyvfzclsm0g13b95hirn99185wc6lp53jkzah9yyi59ay"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; + seqTools = derive2 { name="seqTools"; version="1.26.0"; sha256="08fy8df61xcig4365blnsddc0ywmdv9pmflvdb2ibnpp4480m8i6"; depends=[zlibbioc]; }; + seqbias = derive2 { name="seqbias"; version="1.40.0"; sha256="06w43plv4x1pafybq633n7adqp9yj3bvaaamq7vylmkfbcx3nl8k"; depends=[Biostrings GenomicRanges Rhtslib]; }; + seqcombo = derive2 { name="seqcombo"; version="1.14.1"; sha256="1cbp56nh5gz92napg82vh8gs3vlrj92xqggf5j6v30hw1hd7q7lp"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr yulab_utils]; }; + seqsetvis = derive2 { name="seqsetvis"; version="1.12.0"; sha256="1gviian0xykia1xh42w5r202nlm03hpkfgnc4yabalmv4zmwndh8"; depends=[data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 ggplotify IRanges limma pbapply pbmcapply png RColorBrewer Rsamtools rtracklayer S4Vectors UpSetR]; }; + sesame = derive2 { name="sesame"; version="1.10.4"; sha256="0cw6mlw1ckpc2xrwmdwvcirysk58klb5x6x9lwh93qsa2ij8m0bk"; depends=[BiocParallel DNAcopy GenomicRanges ggplot2 illuminaio IRanges KernSmooth MASS matrixStats preprocessCore randomForest S4Vectors sesameData stringr SummarizedExperiment tibble wheatmap]; }; + sevenC = derive2 { name="sevenC"; version="1.12.0"; sha256="0gwvjf1zmkr6j9id1wm5f2abnrm9anby8xbcr17fbkchzas0kw03"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.22.0"; sha256="1pa1hhfvnsdkgyv6qh7bg3fzbvcmccr7km877vgqhlpgfir10ig2"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.28.0"; sha256="0b5i9anjz02k98zam29hixhrxbak0ghfbv00jj4041cbs42dkaja"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + shinyepico = derive2 { name="shinyepico"; version="1.0.0"; sha256="0hdga4mqrdfhbcmhkmc1k45xhnwqnxnn14lhnz6zlbf4pawi1jb4"; depends=[data_table doParallel dplyr DT foreach GenomicRanges ggplot2 gplots heatmaply limma minfi plotly reshape2 rlang rmarkdown rtracklayer shiny shinycssloaders shinyjs shinythemes shinyWidgets statmod tidyr zip]; }; + sigFeature = derive2 { name="sigFeature"; version="1.10.0"; sha256="0v5g5lz1nl78dy1fgywn4gsb621xw0lb3phf8jvfj84m70g7wwns"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; + sigPathway = derive2 { name="sigPathway"; version="1.60.0"; sha256="1xz5nbw5dzyah8az7mpwj8m27fsvpi2jjhfg3n27dsv8rvdncqi8"; depends=[]; }; + siggenes = derive2 { name="siggenes"; version="1.66.0"; sha256="0lva0f255fcpy625frvij4n14q7nw4jcx8n2hlkxid4mgkfqwlhf"; depends=[Biobase multtest scrime]; }; + sights = derive2 { name="sights"; version="1.18.0"; sha256="0dzmikqfxypbhq5zax4yfr2m0bal79raq7ggrg8m2crqda6020i6"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; + signatureSearch = derive2 { name="signatureSearch"; version="1.6.3"; sha256="1c63a9l5rlvjn6v7cxk136kvng4rbmvlg5jdzz0zsi48vipwhm4f"; depends=[AnnotationDbi BiocGenerics BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp reactome_db readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; }; + signeR = derive2 { name="signeR"; version="1.18.0"; sha256="0bn9h6q90ihlm9027shl74lwzc9niw1yb7fmcxxs42nv65sqv4hs"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; + sigsquared = derive2 { name="sigsquared"; version="1.24.0"; sha256="0awb5k9k459jnmb3rr08407w95r65ip50kgqffpdn9qqrjdimgva"; depends=[Biobase survival]; }; + similaRpeak = derive2 { name="similaRpeak"; version="1.24.0"; sha256="1hhzzidva3z9z1mj5j75mhgns8j7nhn0gnhjdpwmz25c0hc5n5l1"; depends=[R6]; }; + simplifyEnrichment = derive2 { name="simplifyEnrichment"; version="1.2.0"; sha256="0rqa414kvyjjmj4932zk39rqa14z13b57rkrxdrf16jmq2r437vh"; depends=[AnnotationDbi BiocGenerics circlize clue cluster ComplexHeatmap digest GetoptLong GO_db GOSemSim Matrix org_Hs_eg_db proxyC slam tm]; }; + sincell = derive2 { name="sincell"; version="1.24.0"; sha256="140xcarald9pdfp45y84317wzx2cicq4sh3zyn3i563chhi2xqir"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + singleCellTK = derive2 { name="singleCellTK"; version="2.2.0"; sha256="1qdf57mj0hx30zzci0hhvahhqcx2mbq3g7q4vc4mggsxxm0j0r4l"; depends=[AnnotationDbi ape batchelor Biobase BiocParallel celda celldex circlize cluster colorspace colourpicker ComplexHeatmap cowplot data_table DelayedArray DelayedMatrixStats DESeq2 dplyr DropletUtils DT enrichR ExperimentHub fields fishpond ggplot2 ggplotify ggrepel ggtree gridExtra GSEABase GSVA GSVAdata igraph KernSmooth limma magrittr MAST Matrix matrixStats metap msigdbr multtest plotly R_utils RColorBrewer reshape2 reticulate rmarkdown ROCR Rtsne S4Vectors scater scDblFinder scds scMerge scran scRNAseq Seurat shiny shinyalert shinycssloaders shinyjs SingleCellExperiment SingleR SummarizedExperiment sva TENxPBMCData tximport uwot withr yaml zinbwave]; }; + singscore = derive2 { name="singscore"; version="1.12.0"; sha256="16d452s6527xwxsfbfqxjnyn8ifx4lfqfrfkv516w1rs28qnpri3"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; }; + sitadela = derive2 { name="sitadela"; version="1.0.0"; sha256="1hwvy7n0m930llh4j44yk1cp7pkwyx8999w5zdsxvwal7h44mggi"; depends=[Biobase BiocGenerics biomaRt Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; }; + sitePath = derive2 { name="sitePath"; version="1.8.4"; sha256="10syb7nrl83psy1lz06jpy96j1h4mgc8hrrhhikqcb4zqd7x14js"; depends=[ape aplot ggplot2 ggrepel ggtree gridExtra RColorBrewer Rcpp seqinr tidytree]; }; + sizepower = derive2 { name="sizepower"; version="1.62.0"; sha256="1025yfziv9znd278xz7cq8c17nhf5kwrf82nxx2s9pf0zhnh18sp"; depends=[]; }; + skewr = derive2 { name="skewr"; version="1.24.0"; sha256="194bhbv2y90wzqdb4axqq4qg6cihjbz3nvnkfpb82mbh8cai1l0f"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; + slalom = derive2 { name="slalom"; version="1.14.0"; sha256="12majjfp8bm4wyjfw9j1v9gxkwsinnk18bv941j6dz9srmby27ff"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; + slingshot = derive2 { name="slingshot"; version="2.0.0"; sha256="1aqsz2kxwax8d8d5iv3zk5hlyk5aya1wbxs1wky2rgccw4d35whx"; depends=[igraph matrixStats princurve S4Vectors SingleCellExperiment SummarizedExperiment TrajectoryUtils]; }; + slinky = derive2 { name="slinky"; version="1.10.0"; sha256="17v1zdgvbpg1wv8l8v2magcvjq6968glh6d7v5zsda08z4v0np5z"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; + snapCGH = derive2 { name="snapCGH"; version="1.62.0"; sha256="1aih6k76rlpvgq9vxdnm6iln79v7hlrpvlrk5q2q4a1k2psp35zg"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; + snapcount = derive2 { name="snapcount"; version="1.4.0"; sha256="1367gw06fy937gjxbhbf8r0ff6k6aigxdx4s1xdh7qi602bfwvav"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; }; + snifter = derive2 { name="snifter"; version="1.2.0"; sha256="02mc4r9ajpascyqxgw8rc0x23c76b5b9caaxq4w3fi0s950jm3hz"; depends=[assertthat basilisk reticulate]; }; + snm = derive2 { name="snm"; version="1.40.0"; sha256="1a2y4k22lk3l60bm411b44kn8pj9ksyvi23vqxcb49idip4drj9x"; depends=[corpcor lme4]; }; + snpStats = derive2 { name="snpStats"; version="1.42.0"; sha256="11vvih5y9kvyjfp2navkfpp4xiyfgwlv4r0x3p52hkj92pc2pg3g"; depends=[BiocGenerics Matrix survival zlibbioc]; }; + soGGi = derive2 { name="soGGi"; version="1.24.1"; sha256="19m0krfx2v4ylhdq7rxrddy40rlmirqma7ynl6y2kmq0h8m8p26x"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + sojourner = derive2 { name="sojourner"; version="1.6.0"; sha256="0h4nx0v69kxwlis8wm27d5ddvjyjw6kjb73hflmvzl16dy7d6dxr"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang sampSurf scales shiny shinyjs sp truncnorm]; }; + sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.16.0"; sha256="1vwbma8qidydy88ryqjk936cznliqnkklrra5cvyfgsl4qhl7a8h"; depends=[MASS MCMCpack optparse tmvtnorm]; }; + sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.4.2"; sha256="0b22kzg751zlkcbs8pi0bcqrsj3imsg35qfvxfrqb7gav7qznc8v"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; }; + sparsenetgls = derive2 { name="sparsenetgls"; version="1.10.0"; sha256="0kzkbpw6msxka34zixz8pi0vi2zigi3j9ff6cxg72j1fkxhv41az"; depends=[glmnet huge MASS Matrix]; }; + spatialHeatmap = derive2 { name="spatialHeatmap"; version="1.2.0"; sha256="0c0mhdyzaak9jjvanb8ghn2y1vm2g328hmm7xjl04vly1ka5h17i"; depends=[av BiocFileCache data_table DESeq2 dynamicTreeCut edgeR flashClust genefilter ggdendro ggplot2 ggplotify gplots gridExtra grImport HDF5Array htmlwidgets igraph plotly rappdirs rols rsvg S4Vectors shiny shinydashboard SummarizedExperiment visNetwork WGCNA xml2 yaml]; }; + specL = derive2 { name="specL"; version="1.26.0"; sha256="1p1g91lpn1vkn3qvpd1vaj6mlngkybw9bvc4zdmha7qm41s12dkl"; depends=[DBI protViz RSQLite seqinr]; }; + spicyR = derive2 { name="spicyR"; version="1.4.0"; sha256="0gwa7amz3rw7p99rc4wpj79xmlcdr59x5ar0yg5jkxp8fpnwjanh"; depends=[BiocGenerics BiocParallel concaveman data_table dplyr ggplot2 IRanges lme4 lmerTest mgcv pheatmap rlang S4Vectors spatstat_core spatstat_geom tidyr]; }; + spikeLI = derive2 { name="spikeLI"; version="2.52.0"; sha256="0i2d4k6gng4h61k9l5s8myhi48p3svm54n8p177x9fyjh5d0wq5c"; depends=[]; }; + spkTools = derive2 { name="spkTools"; version="1.48.0"; sha256="0qpgjly7rq7dn762x5lggiyy553928kdyv5d5yf661hg5p6zr8k1"; depends=[Biobase gtools RColorBrewer]; }; + splatter = derive2 { name="splatter"; version="1.16.1"; sha256="1cps1l60qg1cirh453lkb69jdzhai6ap1maylrfs1izs5fz27wzi"; depends=[BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; }; + splineTimeR = derive2 { name="splineTimeR"; version="1.20.0"; sha256="1d4i7cjqy6m0lng6lkhjvmqad1jdan8wpv5c0igl0kg5659bc2hq"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; + splots = derive2 { name="splots"; version="1.58.0"; sha256="1lwpap41k27zl23212ncc4mpaf4vwaz419zkahgh8472sb9ypkaz"; depends=[RColorBrewer]; }; + spqn = derive2 { name="spqn"; version="1.4.0"; sha256="1cxclv0w5sa0p7dm03am70x9m03qvxy7x96x4flhd3511x4gvj0q"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; }; + srnadiff = derive2 { name="srnadiff"; version="1.12.2"; sha256="1g2lh459biabl0z7vacm5mnwmwcrb1ra5i3sgmpfkrmgzimc49ff"; depends=[baySeq BiocManager BiocParallel BiocStyle DESeq2 devtools edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + ssPATHS = derive2 { name="ssPATHS"; version="1.6.0"; sha256="15x1ysbn2qv03wy6avmnnl3r38mq4372sxjr0zz4gb6fdh5h5bnn"; depends=[dml MESS ROCR SummarizedExperiment]; }; + sscore = derive2 { name="sscore"; version="1.64.0"; sha256="13bp1vzx93wra25cnb4ilvz7ckj1c1k3rh5wxsas6hq9lfkk2j0i"; depends=[affy affyio]; }; + sscu = derive2 { name="sscu"; version="2.22.0"; sha256="0v0kb6kpy75n57qklssjfmdp2mas5rpd4jhavvv00vqhhns13ay3"; depends=[BiocGenerics Biostrings seqinr]; }; + ssize = derive2 { name="ssize"; version="1.66.0"; sha256="1jzvmqx08yl78xhqr9sv93gd78as3s1nf26kvasswgxyl3szakdp"; depends=[gdata xtable]; }; + ssrch = derive2 { name="ssrch"; version="1.8.1"; sha256="046j8js3vdxl1gfn8g3d5mf6ixqffzniazwmn6kcdj2m4z6icpvg"; depends=[DT shiny]; }; + ssviz = derive2 { name="ssviz"; version="1.26.0"; sha256="17asjmqd0dv14jfrj0xj4nd5p6k2z0ky662xnngr1d05sykx8pdz"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + staRank = derive2 { name="staRank"; version="1.34.0"; sha256="1y4vfwp6j9chk8ld2jcx8divhmlpp3f3ccpwzad3whrfn78px7cv"; depends=[cellHTS2]; }; + stageR = derive2 { name="stageR"; version="1.14.0"; sha256="1hlwhnf0vavrgbs4222w1avl8j3qasz5dkbjxfbicmr84g1fx823"; depends=[SummarizedExperiment]; }; + statTarget = derive2 { name="statTarget"; version="1.22.0"; sha256="0jaczdg8q9w36325h08z5plf6a4n6mkc8wj5hsfgj29pwqbj607v"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; + stepNorm = derive2 { name="stepNorm"; version="1.64.0"; sha256="01c3zv6ckayi1j3bppcc1dad8qdmkx7gf5awmrki3f8nq3zqznph"; depends=[marray MASS]; }; + strandCheckR = derive2 { name="strandCheckR"; version="1.10.0"; sha256="14nvpryrghcv0yvfhj035n9fymdjfpimjxcksxvk26f91yf0zlw7"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + struct = derive2 { name="struct"; version="1.4.0"; sha256="09f68qbiyha2gc4lad9yv07r8fv5hyckqia6gjnzxs05x646rxjb"; depends=[knitr ontologyIndex S4Vectors SummarizedExperiment]; }; + structToolbox = derive2 { name="structToolbox"; version="1.4.3"; sha256="10aq9605xir4s1m1391909xzq9k41c35ddn34njyhnh26i3zql1x"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; }; + subSeq = derive2 { name="subSeq"; version="1.22.0"; sha256="0kdqlfzwjp1d8i4f1hxamc9k0m8hsnj587jxl6nwfar3vx0rvpid"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supersigs = derive2 { name="supersigs"; version="1.0.0"; sha256="12z42xsm6jpn31dbraj9k65f8yqmh2qcwsf7ppiqmn025g2h4li1"; depends=[assertthat Biostrings caret dplyr rlang rsample SummarizedExperiment tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.30.0"; sha256="0xdfpwjwwmvi1vi7g9i6zkp7n08vagz2hzpkm487826hj4z3dn64"; depends=[ape dplyr hexbin igraph magrittr MASS purrr readr stringr tibble tidyr]; }; + survcomp = derive2 { name="survcomp"; version="1.42.0"; sha256="0d9pm3idqig9ksw4sfm4g9b8fwv24lhy8qqcqbqf0gav9ij39wzc"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + survtype = derive2 { name="survtype"; version="1.8.0"; sha256="1yfkkcbnv09dgba1xll86fmjq9m4ryyyi8idsqgvd6qhf3pb9wbr"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; }; + sva = derive2 { name="sva"; version="3.40.0"; sha256="12jkcybdfspabh7x124d44l9fj1hwwg3gvcqxvz5wpkiflc2vkji"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; }; + swfdr = derive2 { name="swfdr"; version="1.18.0"; sha256="0mqc28s0kw87d93m8z9xkh81s8j6y18ggkdgx48iil5adw8rfs00"; depends=[]; }; + switchBox = derive2 { name="switchBox"; version="1.28.0"; sha256="10zriwb306rd9lnw8vxqgwx4cj40j8dv9z4dx7ba3b78rrhj67kz"; depends=[gplots pROC]; }; + switchde = derive2 { name="switchde"; version="1.18.0"; sha256="1rq2ccw1byz87g6425h1wfmzn4crl0jfn56d4ns7gxsw32jj4258"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; + synergyfinder = derive2 { name="synergyfinder"; version="3.0.13"; sha256="1md6ah2yv79n1h7jd21nfjrs41gan3n430sw64qwranngrqd6sy5"; depends=[dplyr drc furrr future ggforce ggplot2 ggrepel gstat kriging lattice magrittr metR mice nleqslv pbapply plotly purrr reshape2 sp SpatialExtremes stringr tidyr tidyverse vegan]; }; + synlet = derive2 { name="synlet"; version="1.22.0"; sha256="197j5dw8ginr7rhiv8fwcixm5bf9gbbjnzqkvgjm3wd8803fhx5k"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.26.3"; sha256="01l35l5zj87qkarrbal9la6kshk3j7k8hy3iimv3gdnnz4axmvs7"; depends=[annotate assertthat batchtools Biostrings crayon DESeq2 DOT edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats IRanges limma magrittr pheatmap rjson Rsamtools rsvg S4Vectors ShortRead stringr SummarizedExperiment testthat VariantAnnotation yaml]; }; + systemPipeShiny = derive2 { name="systemPipeShiny"; version="1.2.0"; sha256="1s4ammnfs70x6apz1r83qaj9p9f5ppiv1z3n76jc71bd7gab1lym"; depends=[assertthat bsplus crayon dplyr drawer DT ggplot2 glue htmltools magrittr openssl plotly R6 rlang RSQLite rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyFiles shinyjqui shinyjs shinytoastr shinyWidgets spsComps spsUtil stringr styler tibble vroom yaml]; }; + systemPipeTools = derive2 { name="systemPipeTools"; version="1.0.0"; sha256="1d7ykaq4c80dhfq3ljnjpl2f8c1a7yqd0mf5k4c2gdh4jfzypf0s"; depends=[ape DESeq2 dplyr DT GGally ggplot2 ggrepel ggtree glmpca magrittr pheatmap plotly Rtsne SummarizedExperiment tibble]; }; + tLOH = derive2 { name="tLOH"; version="1.0.0"; sha256="1vbdsnm5r8d9gwgk7klwmgg579q5m9vwh1r6x2027y76547wzzpl"; depends=[data_table dplyr GenomicRanges ggplot2 MatrixGenerics purrr scales VariantAnnotation]; }; + tRNA = derive2 { name="tRNA"; version="1.10.0"; sha256="0q3ngh4kjbwyaax4r6bagc7phkxvymvvmvps47xb99cjdgfsk47p"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; }; + tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.10.0"; sha256="0lp110pa6rylyv771hfsrpj4cqsqdff67ky50x140j1kv4d41fkw"; depends=[BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; }; + tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.12.0"; sha256="1d5mzngrajykj4ras3z307n72nf5zwqdz6jabx1k201l4vanrr6b"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.30.0"; sha256="1l2s08nrd403hiiy080hd0946vkyjvl4z22ya8m2xipc13hrv59v"; depends=[anota Biobase DESeq2 edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; + target = derive2 { name="target"; version="1.6.0"; sha256="132n4jfbhf50xkdfq2gs9fl30znkmhb0qq99fydywlhas2qw8n7n"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; }; + tenXplore = derive2 { name="tenXplore"; version="1.14.2"; sha256="0b1n3jnrrp4s6msvqiyv1a4fh1yvswh76z85hnh52rbr6ba65xbh"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; + ternarynet = derive2 { name="ternarynet"; version="1.36.0"; sha256="1fgbsvc5q9zmgdpcc4lyc1kq54sq39xc11mz29k4kl470r7ld5l2"; depends=[BiocParallel igraph]; }; + tidySingleCellExperiment = derive2 { name="tidySingleCellExperiment"; version="1.2.1"; sha256="1nin31l3p7xzbhxq8haq5l8zfg62j9hk2sgvmnffkd9sh76k7dia"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr tidyselect]; }; + tidySummarizedExperiment = derive2 { name="tidySummarizedExperiment"; version="1.2.0"; sha256="1y5gcyn2kaq3xvvj5m1c6744lc12i86p60b5q3h7vvffp1lh3lvd"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect]; }; + tidybulk = derive2 { name="tidybulk"; version="1.4.0"; sha256="0r1nrpzjhnrkk7karcjja763yph8kwck2r1ksg8nqdmxhrpa5fwd"; depends=[dplyr lifecycle magrittr preprocessCore purrr readr rlang scales stringr SummarizedExperiment tibble tidyr]; }; + tigre = derive2 { name="tigre"; version="1.46.0"; sha256="01x7snnp2d9cl1322z5i4am96zc5pxj3b9d7l467cr0w27s199gf"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tilingArray = derive2 { name="tilingArray"; version="1.70.0"; sha256="11k1x2p44knvk6yvyf5macidxbnhb8m7j7s8axhdyiclpfii7wlr"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; + timeOmics = derive2 { name="timeOmics"; version="1.4.0"; sha256="1xhlwd6l15bc00jsg4c85ji9zgfch3400z0qfpl7as1ipr5j2kxy"; depends=[dplyr ggplot2 ggrepel lmtest magrittr mixOmics plyr propr purrr stringr tibble tidyr]; }; + timecourse = derive2 { name="timecourse"; version="1.64.0"; sha256="1y2j23lalb9vyifm6dzd3pclpjyhcgmg34215nzyympqrhxi28mg"; depends=[Biobase limma marray MASS]; }; + timescape = derive2 { name="timescape"; version="1.16.0"; sha256="0m13d4fsxpifg2di3q6qg6c92f6mi6wh53qd8y29z8mk5rr6ijh8"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; + tkWidgets = derive2 { name="tkWidgets"; version="1.70.0"; sha256="0pm2bnksqy79smbp06d7vdnziacbfff8ddbn0hr0izxqm118pln9"; depends=[DynDoc widgetTools]; }; + tofsims = derive2 { name="tofsims"; version="1.20.0"; sha256="11widfrg4jrwcahjc0r0ydxjil12z0jjrky62iba4jv6w0q1sfbz"; depends=[ALS alsace KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + tomoda = derive2 { name="tomoda"; version="1.2.0"; sha256="15d1rrhhj527cjgs3j7n16v7myiirhqg4q6mp02mn00s3ygphxhl"; depends=[ggplot2 ggrepel RColorBrewer reshape2 Rtsne SummarizedExperiment umap]; }; + topGO = derive2 { name="topGO"; version="2.44.0"; sha256="1ggi7yrhkyi85p3sfj3yd95n9mzq1xpff28ixa4dl9yzasks1v5a"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + topconfects = derive2 { name="topconfects"; version="1.8.0"; sha256="1vzbqicsvfl7q8s2rn2qrda8xvwb8apxxw2xk29dg2h7kdlai93i"; depends=[assertthat ggplot2]; }; + topdownr = derive2 { name="topdownr"; version="1.14.0"; sha256="1bz1qd3f7sya09hw04spcmph6s6r7ibdzbm7r05z437ki5hflw6n"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; + trackViewer = derive2 { name="trackViewer"; version="1.28.1"; sha256="10mnsqp4ss8s4l67za19xxh9v87d1ncy9ylb972afsvfbj394y39"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rcpp Rgraphviz rhdf5 Rsamtools rtracklayer S4Vectors scales]; }; + tracktables = derive2 { name="tracktables"; version="1.26.0"; sha256="1fl3k63n2pr39vrf8npz1000zfr4y85k0lm8kbnjfq5n8bhnzanv"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; + tradeSeq = derive2 { name="tradeSeq"; version="1.6.0"; sha256="0fgmb309pvqf3chdhqgbd4lzhahcj5g71sica33nzn98qhipldx7"; depends=[Biobase BiocParallel edgeR ggplot2 igraph magrittr Matrix matrixStats mgcv monocle pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble viridis]; }; + transcriptR = derive2 { name="transcriptR"; version="1.20.0"; sha256="0xl88fk8i4pnbd7hw4v48awdgr5il1fgml0x7dqb00rgcmjbk5yr"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + transcriptogramer = derive2 { name="transcriptogramer"; version="1.14.0"; sha256="18sks1p27qs7vfvs37vdaidj6r7pbwg5479lyv1pycvwgrz1sxwv"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; + transite = derive2 { name="transite"; version="1.10.0"; sha256="1x8qf28m2hqx0b968wdffy1gm1kffvv08hzm2yy2z7z0kxfj8mm0"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; + transomics2cytoscape = derive2 { name="transomics2cytoscape"; version="1.2.1"; sha256="1v88a5pfgnkda396f92svrky8ikawg1cq53447k4hc0g3p5cg5px"; depends=[dplyr KEGGREST RCy3]; }; + traseR = derive2 { name="traseR"; version="1.22.0"; sha256="197gy5a8zb1mxjhjvpxlpgna9qq1cwlqhd0pjq69vbzjhvhrr643"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; + treeio = derive2 { name="treeio"; version="1.16.2"; sha256="1y60yvg1rl21cab9xrkns0209pg44mwr90qj099dvk97wsjkx67g"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; }; + treekoR = derive2 { name="treekoR"; version="1.0.0"; sha256="09b7mjf6zaq1gnm9yvd5178v1i137cxlp3bzqgzsll0ipgxrf1av"; depends=[ape data_table dplyr ggiraph ggplot2 ggtree hopach magrittr patchwork SingleCellExperiment tidyr]; }; + trena = derive2 { name="trena"; version="1.14.0"; sha256="1vyv1q48163darxq9xlnib75rh83996xgaj8pqnlrhhyh8qvwwki"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr xgboost]; }; + tricycle = derive2 { name="tricycle"; version="1.0.0"; sha256="19y2q39850nsqbhcqs0jf6mn67v7092vsyqrcxkmr8v0pniyrjz3"; depends=[AnnotationDbi circular dplyr GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors scater scattermore SingleCellExperiment SummarizedExperiment]; }; + trigger = derive2 { name="trigger"; version="1.38.0"; sha256="1ls3j9ws1g59app153asbkhlfy8a589xcpg62cbskqfi13pm5qzl"; depends=[corpcor qtl qvalue sva]; }; + trio = derive2 { name="trio"; version="3.30.0"; sha256="0irbbgfyg843asvfh320kbifjn8gpvkhabzwcw30gz40wqpnjn7p"; depends=[LogicReg siggenes survival]; }; + triplex = derive2 { name="triplex"; version="1.32.0"; sha256="088vd2g9cwyhqlpiw62wq2xip92dc2yy1aw64a6phkgqgpnmir6j"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; }; + tscR = derive2 { name="tscR"; version="1.4.0"; sha256="0bs1rkad0qb4fcpl6wpnik7yzxsh799859kqs4gpj9q63hgf4d27"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges kmlShape knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; }; + tspair = derive2 { name="tspair"; version="1.50.0"; sha256="1ml60sbcpsrksyl5ih58gf1a17jvl6xxbfwfh0fvxpfcidvlplp3"; depends=[Biobase]; }; + ttgsea = derive2 { name="ttgsea"; version="1.0.0"; sha256="08kgarbaf1dic2vydhr64dvqb6hsgfwshzqqsrp516rdcj55dvi5"; depends=[data_table DiagrammeR keras purrr stopwords text2vec textstem tm tokenizers]; }; + tweeDEseq = derive2 { name="tweeDEseq"; version="1.38.0"; sha256="15vlm7a1p950g4gimwqhij4m6ps2ni4236hvv2jw59ianzfp2fmh"; depends=[cqn edgeR limma MASS]; }; + twilight = derive2 { name="twilight"; version="1.68.0"; sha256="1x9xs9fn4y594mmpjhzzw8i3k46dx8pax087ijsi659q2xqjqsf2"; depends=[Biobase]; }; + twoddpcr = derive2 { name="twoddpcr"; version="1.16.0"; sha256="1kak3b6f7m5524ihca6hgcs9rbwxpn0dplafy5j5m16y0jnliwlx"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; + tximeta = derive2 { name="tximeta"; version="1.10.0"; sha256="0ipgpcl93cac4qff6lp9x2l3gav5kb1x1d56g32h09hlm797rvvh"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix S4Vectors SummarizedExperiment tibble tximport]; }; + tximport = derive2 { name="tximport"; version="1.20.0"; sha256="0ip2yr0zspf2aagskxl4dwncr48dw5qb90an3sswnnh2dqdb82if"; depends=[]; }; + uSORT = derive2 { name="uSORT"; version="1.18.0"; sha256="0pqdh8jk4frqbdxm5lh56zhsarbqvcjwafnjns95zv99gpyc5lyn"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; + uncoverappLib = derive2 { name="uncoverappLib"; version="1.2.0"; sha256="1c1djx0sqrcrd7hqk1j7mxg0zwfr5mg179qijm46hwyg6sl67m34"; depends=[BiocFileCache BSgenome_Hsapiens_UCSC_hg19 condformat DT EnsDb_Hsapiens_v75 EnsDb_Hsapiens_v86 GenomicRanges Gviz Homo_sapiens markdown openxlsx org_Hs_eg_db OrganismDbi processx rappdirs rlist Rsamtools shiny shinyBS shinycssloaders shinyjs shinyWidgets stringr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.28.0"; sha256="1clcz610sl3s0mjf84j21xgrmjhkxcc4h292ljwq5yzbkk68g896"; depends=[BiocGenerics HTqPCR]; }; + universalmotif = derive2 { name="universalmotif"; version="1.10.2"; sha256="0hv2v2zgif5ihr5hxmdz32rln43jc1j0rslp44kd3rijjl45zysn"; depends=[BiocGenerics Biostrings ggplot2 IRanges MASS Rcpp RcppThread rlang S4Vectors yaml]; }; + variancePartition = derive2 { name="variancePartition"; version="1.22.0"; sha256="1pqy2g9pg8pswmkrs2fzlkwwliw2r7f33h05bci5bz41b8ribpzj"; depends=[Biobase BiocParallel colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest progress reshape2 scales]; }; + vbmp = derive2 { name="vbmp"; version="1.60.0"; sha256="0mx8z20c6ngx9rx1xada77lnpj9fwy08izrsb47p3a358z1n06d5"; depends=[]; }; + velociraptor = derive2 { name="velociraptor"; version="1.2.0"; sha256="06wymf4nwv024cq9amqx0zgf6gr71cnfscqj9l1zw7zbc2kj4id7"; depends=[basilisk BiocGenerics BiocParallel BiocSingular DelayedArray Matrix reticulate S4Vectors scuttle SingleCellExperiment SummarizedExperiment zellkonverter]; }; + vidger = derive2 { name="vidger"; version="1.12.0"; sha256="1c09il55qrai6yhvkirisry4hxr9g7d1vj185xh0i8vzy0mk5xby"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; + viper = derive2 { name="viper"; version="1.26.0"; sha256="113g0zwz89rfnnvdl16s9iiim1n73v6aql6lzpwsk288779sz991"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vissE = derive2 { name="vissE"; version="1.0.0"; sha256="02gsga6pr664qcnvg8dmq54kyhv6zbmdqa61cxn39jdkn6fs0bnr"; depends=[ggforce ggnewscale ggplot2 ggrepel ggwordcloud GSEABase igraph Matrix msigdb plyr RColorBrewer reshape2 scico textstem tm]; }; + vsn = derive2 { name="vsn"; version="3.60.0"; sha256="0nppph3kv8z83368snb8s3n4vcqj829yyi1kh4q09qvq18rhvssv"; depends=[affy Biobase ggplot2 lattice limma]; }; + vtpnet = derive2 { name="vtpnet"; version="0.32.0"; sha256="1hy47wiai1dw0f6pzz64kxqzn57wnxvsa3miiyvbnzfiw1a3ksmz"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; + vulcan = derive2 { name="vulcan"; version="1.14.0"; sha256="00yrnrvfqhamwcbcsqqg2zn1b6j30vcmc9dnqgi5ndf94lvfbnga"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq2 DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; + waddR = derive2 { name="waddR"; version="1.6.1"; sha256="0011nrbc22ww42wnma6cnfif9frhgwxl4g1qz7nij1l1izg24v8c"; depends=[arm BiocFileCache BiocParallel eva Rcpp RcppArmadillo SingleCellExperiment]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.36.0"; sha256="1qar8z0nf33bqr488swig0bfq8lnvcdjcxvw3q3b0hkkvybn27zw"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.26.0"; sha256="1sydzrqydfv1ik2h08xkxlx6xrv866bf0if6v5wch9l3krh0sych"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; }; + weaver = derive2 { name="weaver"; version="1.58.0"; sha256="0d7q1prq2zdxbj1ib1q8c42jsgylvbn3j025dl69w17971lbfdyg"; depends=[codetools digest]; }; + webbioc = derive2 { name="webbioc"; version="1.64.0"; sha256="1mpdw477j78s2nvlf2lzm6mdjcpamyyazjn060h9q3apawn6zajx"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; + weitrix = derive2 { name="weitrix"; version="1.4.0"; sha256="03ayy6bcmhyvmh9451iilpjbf0lwzbhw9y8lzd7rrq7129mbjgi9"; depends=[assertthat BiocGenerics BiocParallel Ckmeans_1d_dp DelayedArray DelayedMatrixStats dplyr ggplot2 glm2 limma purrr reshape2 RhpcBLASctl rlang S4Vectors scales SummarizedExperiment topconfects]; }; + widgetTools = derive2 { name="widgetTools"; version="1.70.0"; sha256="186xgpgyfyi4angxhz6558lfpzvvszzlpyfr8xnbccs3gshk3db2"; depends=[]; }; + wiggleplotr = derive2 { name="wiggleplotr"; version="1.16.0"; sha256="13f3g6fcc29k0g21mhnypm3nc6qqjw867vamvfkdzynspsfb32ga"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; + wpm = derive2 { name="wpm"; version="1.2.1"; sha256="19x3wakx2h7h0hvlbm9yq2lw83lysmxjwq350bc0kvz62hii6i5r"; depends=[Biobase cli config dplyr DT ggplot2 golem logging RColorBrewer rlang shiny shinycustomloader shinydashboard shinyWidgets stringr SummarizedExperiment]; }; + wppi = derive2 { name="wppi"; version="1.0.0"; sha256="0wbvkhhhy1ngj0sxvi12z1qk13dp3cbzaxc58kycmvmns9flffbf"; depends=[dplyr igraph logger magrittr Matrix OmnipathR progress purrr RCurl rlang tibble tidyr]; }; + xcms = derive2 { name="xcms"; version="3.14.1"; sha256="1g8k90p0sbcb3rdrbldj5bcjp2piy5ldni4jplyr78vjpmrmvqk7"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MsCoreUtils MSnbase mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors SummarizedExperiment]; }; + xmapbridge = derive2 { name="xmapbridge"; version="1.50.0"; sha256="0bbhlm4c5v8d3qw579lw9qgyyq3p8kdd2kcrdlgv7q18gp5bkw7h"; depends=[]; }; + yamss = derive2 { name="yamss"; version="1.18.0"; sha256="1al615x778h17jqiyhiyf6djaq9iygs1hlbrna6y4xc0f2kvgxld"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; + yarn = derive2 { name="yarn"; version="1.18.0"; sha256="1x07l255x52z6cgdc2j8285shqszhr034xm5686rp6d35vah55ji"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; + zFPKM = derive2 { name="zFPKM"; version="1.14.0"; sha256="1k7xaxr2gn26y8bps5l32g2axfhdn07nbk4q3qcx32d5jm75qkx2"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; + zellkonverter = derive2 { name="zellkonverter"; version="1.2.1"; sha256="0b1wsxvixrv517crry07wmsqhx1sc6nfd7jk5z6svpydhwkg1jqr"; depends=[basilisk DelayedArray Matrix reticulate S4Vectors SingleCellExperiment SummarizedExperiment]; }; + zinbwave = derive2 { name="zinbwave"; version="1.14.2"; sha256="1y8krazz2qdn0wn8ijjs2gn5dl5l960v6bijbkvh0r8066l7viky"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; + zlibbioc = derive2 { name="zlibbioc"; version="1.38.0"; sha256="1dv5bf12kzk1yzyfs3g5syim16sbi44kalvzj2i2xcnxnl6x60ip"; depends=[]; }; + EasyqpcR = derive2 { name="EasyqpcR"; version="1.31.0"; sha256="0lb2px789668fr1gxghycy7lbdkpwmippv6xmmwws6rbanvfd6v4"; depends=[matrixStats plotrix plyr]; broken = true; }; } diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index a09fa4af80a..57d9abc6663 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2021-05-05"; }; +let derive2 = derive { snapshot = "2021-09-26"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; AATtools = derive2 { name="AATtools"; version="0.0.1"; sha256="08is383xhs2lc9wfffykcwqyl8mwcxfpk3lnvlpkp96hq9m9ikbf"; depends=[doParallel dplyr foreach magrittr]; }; @@ -28,14 +28,14 @@ in with self; { ADCT = derive2 { name="ADCT"; version="0.1.0"; sha256="1glf83ydx4v3ld8c4gb9h3jk6srd054bis5l8k57p1ba4fnqnnpp"; depends=[mvtnorm]; }; ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; }; ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; }; - ADMM = derive2 { name="ADMM"; version="0.3.2"; sha256="0wxjl9pdrcrbbcl1vq48ajgqdm2m1ymaf5xcnr5sf44v50lxyqic"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo Rdpack]; }; + ADMM = derive2 { name="ADMM"; version="0.3.3"; sha256="04biinzr0x3jkwss00q6zxfnzk62dafc6386z5vfqs4ch0ifh60n"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo Rdpack]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1.1"; sha256="1la92fwg75ylqbz00znqd0rhv5r509kgh9wwznjacppif773wp6i"; depends=[Matrix Rcpp RcppEigen]; }; ADMMsigma = derive2 { name="ADMMsigma"; version="2.1"; sha256="1943dza086s22pr0yz41wzn9cdg11x7fl9zr3w012865yj219m7l"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; ADMUR = derive2 { name="ADMUR"; version="1.0.3"; sha256="1wv5frav8vjkvsqwng9zddajmb7rdm4iqrikw9cjpqdpk7njl8ph"; depends=[mathjaxr scales zoo]; }; + ADP = derive2 { name="ADP"; version="0.1.6"; sha256="1ljm4bri3b96r544x3n37qrfm6krmij8yjfr8n5acllqp6jnf2d5"; depends=[]; }; ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; ADVICE = derive2 { name="ADVICE"; version="1.0"; sha256="1p8186715lzk4prxaw5v0np9z1zfj9zbp124jrch0yygvkxksy7r"; depends=[]; }; - ADtools = derive2 { name="ADtools"; version="0.5.4"; sha256="0bl6wgdjhf55cxjkw2k7wd2kmkhlr1006lgs35ny1av8s7m2bwmk"; depends=[assertthat dplyr magrittr Matrix mvtnorm purrr Rcpp RcppArmadillo]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; AEP = derive2 { name="AEP"; version="0.1.2"; sha256="07a3nlkiqbbwbd59n27sgiinlwsgfpy4mn13h41va97wlvd5zl2b"; depends=[]; }; AER = derive2 { name="AER"; version="1.2-9"; sha256="03al0jfxdbi8sqkav7gz3aqbxm32qjdnh4l93vy1jr3n2h5kjy9v"; depends=[car Formula lmtest sandwich survival zoo]; }; @@ -44,17 +44,17 @@ in with self; { AFM = derive2 { name="AFM"; version="2.0"; sha256="1l0yd68h8vlii1437zhyrxj6fq1ghfaqclk860c25q2d055ajnqd"; depends=[data_table dbscan fftwtools fractaldim ggplot2 gridExtra gstat igraph mixtools moments plyr png pracma rgl scales shiny shinyjs sp stringr]; }; AFheritability = derive2 { name="AFheritability"; version="0.1.0"; sha256="03w0a4z2x539ykyzdxm1mfqkhzz03cg0aqvgi062jrrm5m6f57ix"; depends=[ggplot2 mvtnorm reshape2 shiny]; }; AGD = derive2 { name="AGD"; version="0.39"; sha256="0hmq684snnffc2v7vmns4ky200a6zh1ggiap03n5cvpb3nlqc6lr"; depends=[gamlss gamlss_dist]; }; - AGHmatrix = derive2 { name="AGHmatrix"; version="2.0.0"; sha256="1hm9ak885xi6b6fzqaj5ipykwc81a1r6p68fcfhwcd2qy0cqqsvv"; depends=[Matrix zoo]; }; + AGHmatrix = derive2 { name="AGHmatrix"; version="2.0.4"; sha256="1pvnv3fzxfdzjz9il0022k46kkcb57ypz31qn0br7mck64bkzsia"; depends=[Matrix zoo]; }; AGPRIS = derive2 { name="AGPRIS"; version="1.0"; sha256="0xlaz75d19adfq79sh5aa52bzpmjqawshay2a3vw9mq8l23z64if"; depends=[Matrix matrixcalc maxLik plyr rgdal sp spacetime spdep]; }; AGSDest = derive2 { name="AGSDest"; version="2.3.2"; sha256="0f3qchvdi2n1cr8ipjj332dw8hdza58dvfk21p0c6bhmxzg7f71i"; depends=[ldbounds]; }; AGread = derive2 { name="AGread"; version="1.1.1"; sha256="0ar0cnlaxxmvn2gdydmm9vr45xjhx06kky556d17l93k0xwfvzm3"; depends=[anytime binaryLogic data_table DescTools dplyr GGIR lubridate magrittr PAutilities Rcpp reshape2 rlang seewave stringr]; }; AHM = derive2 { name="AHM"; version="1.0.1"; sha256="00r1rn7d64a18rckbxvla5yapqv00p9ajxv72fx7s6p80kfal89w"; depends=[devtools dplyr glmnet Matrix mixexp plgp quadprog tibble tidyr]; }; - AHMbook = derive2 { name="AHMbook"; version="0.2.2"; sha256="0js9hlpi5yw6dwc7lsff7d71x045gx4scggik352p6y2y339hhpr"; depends=[coda mvtnorm plotrix RandomFields raster sp spdep unmarked]; }; + AHMbook = derive2 { name="AHMbook"; version="0.2.3"; sha256="0ygdxyliq9wmpmjgmq1wb6a1g9pv6jl0lzaz7545gzwn7nwdw1y7"; depends=[coda mvtnorm plotrix RandomFields raster sp spdep unmarked]; }; AHPhybrid = derive2 { name="AHPhybrid"; version="0.1.0"; sha256="1hf2ba52nim13jwkq857vnmnnb1yhgdz6kipqg3mmqrgz7kg52v1"; depends=[]; }; AICcmodavg = derive2 { name="AICcmodavg"; version="2.3-1"; sha256="1c2qqizssy7jvzkndlljazk28rjq5csgawzs43gv3s9qbahpslfh"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; AID = derive2 { name="AID"; version="2.6"; sha256="029zwgz8mwskh8gpliadxvvnsvkf045ghryci7sacgw0m5gg0xfc"; depends=[ggplot2 MASS meta nortest psych stringr tseries]; }; AIG = derive2 { name="AIG"; version="0.1.9"; sha256="1jnnfmcwxcv4fsdcz7jb2lgczxdwrq3qxg2bhsh1610iwz4gzii7"; depends=[dplyr magrittr mgcv rgl]; }; - ALA4R = derive2 { name="ALA4R"; version="1.9.0"; sha256="0bxsdv2spdcbll09lmayln8ald8gbkngnqxwn0q5ccjdiaavmc4f"; depends=[assertthat data_table digest httr jsonlite sp stringr wellknown]; }; + AIPW = derive2 { name="AIPW"; version="0.6.3.2"; sha256="1iqq665qigw9dmc62x2dz1nvrk8s65ph0a3k2p7mkznr9frshhi2"; depends=[future_apply ggplot2 progressr R6 Rsolnp SuperLearner]; }; ALDqr = derive2 { name="ALDqr"; version="1.0"; sha256="0gk8hxh4p0fi47sf1zsvvxxbzp38vzk60wh8hmc63phnjab6qkv4"; depends=[HyperbolicDist sn]; }; ALEPlot = derive2 { name="ALEPlot"; version="1.1"; sha256="0bakl8a7xda7vh9zsc66kkd5w5jmb5j28kfwpfq2ifvk2mrakr3w"; depends=[yaImpute]; }; ALS = derive2 { name="ALS"; version="0.0.6"; sha256="1swrn39vy50fazkpf97r7c542gkj6mlvy8gmcxllg7mf2mqx546a"; depends=[Iso nnls]; }; @@ -63,6 +63,7 @@ in with self; { ALTopt = derive2 { name="ALTopt"; version="0.1.2"; sha256="1nbbvniramajg6k83xqgx7r0abjrfja8zz0y3g3j8qmvbcqmjx13"; depends=[cubature lattice]; }; ALassoSurvIC = derive2 { name="ALassoSurvIC"; version="0.1.0"; sha256="0q02rz947bp6i7sbb5nzxq8ky74iprdnpbwnmnn7vg29vhca4b09"; depends=[Rcpp]; }; AMAP_Seq = derive2 { name="AMAP.Seq"; version="1.0"; sha256="0z0rrzps6rm58k4m1ybg77s3w05m5zfya4x8ril78ksxsjwi3636"; depends=[]; }; + AMAPVox = derive2 { name="AMAPVox"; version="0.1.0"; sha256="1c91ghjyaxqc23bvq3n4drjpqskbnr32d988hsbph44ypj0n2acj"; depends=[data_table stringr]; }; AMCP = derive2 { name="AMCP"; version="1.0.1"; sha256="14fbb2p4dbgi7i31xxavrldw4wnd4cjjh56ys63rivkswi1hhzj2"; depends=[]; }; AMCTestmakeR = derive2 { name="AMCTestmakeR"; version="1.0.0"; sha256="1vgncc61gmqhax2a7072jb36bzkycv80xqihkr5qs8jxnqqkndxd"; depends=[]; }; AMGET = derive2 { name="AMGET"; version="1.0"; sha256="18wdzzg5wr7akbd1iasa4mvmy44fb2n5gpghwcrx80knnicy3dxq"; depends=[]; }; @@ -70,18 +71,19 @@ in with self; { AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-16"; sha256="0vw6hhykg1r6xxja6d4zb2y00x7pfkmhcq9xkidz8p4arinb7xnl"; depends=[]; }; AMPLE = derive2 { name="AMPLE"; version="0.0.2"; sha256="0j19f8rl7gkads4n52l5gfc5k7dx27sswzrypwl7dnxhfp4ivql7"; depends=[dplyr ggplot2 shiny shinyjs tidyr wesanderson]; }; - AMR = derive2 { name="AMR"; version="1.6.0"; sha256="1xbgs372zn93i99njm7ka2dg2qxfwh231z2yslbal3h40p9il3pa"; depends=[]; }; + AMR = derive2 { name="AMR"; version="1.7.1"; sha256="1ggd3lwiimlb6qrd444jcx0capkq5rxr7m8wb9q663z1332grv1b"; depends=[]; }; ANN2 = derive2 { name="ANN2"; version="2.3.4"; sha256="1izljhz3rkzq05dkvg9q3fdyj7q871j8lsky67d5r8ffpzm1lk3z"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 testthat viridisLite]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; ANOVAIREVA = derive2 { name="ANOVAIREVA"; version="0.1.0"; sha256="04z2g79nnh5yhn4aqw0i7ck2b1z5dbasf1zp1sj6rjjrp9aqmaa6"; depends=[car dplyr ggplot2 plotly rmarkdown shiny]; }; ANOVAShiny = derive2 { name="ANOVAShiny"; version="0.1.0"; sha256="1z8wi8c8j3rlchfk1vx101qz1r9j2jl5lfh72y5lqsisqxl2fyyz"; depends=[DescTools dplyr HH rhandsontable rmarkdown shiny]; }; ANOVAShiny2 = derive2 { name="ANOVAShiny2"; version="0.1.0"; sha256="0bnxfg5c37wi5g53jd0zqq31yx29zvlk2m2jh6jlwki8khpp9y00"; depends=[DescTools dplyr HH rhandsontable rmarkdown shiny]; }; - ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.4"; sha256="0rq4aphjmqrr4pm55vpc8qr4rghqkmlsqsvxzarx3kmr3aqlmqg8"; depends=[quadprog shiny]; }; AOV1R = derive2 { name="AOV1R"; version="0.1.0"; sha256="0dv7k0mifybkarpwqyla5j6cvw9dcch09wvdq09ra9bsf4vyk652"; depends=[cellranger data_table lazyeval purrr]; }; + APAtree = derive2 { name="APAtree"; version="1.0.1"; sha256="0vhvx2xp62avyq405jqn4i3z8awlifcs1lb527brxxhybrhnk4rv"; depends=[BH FD lwgeom raster Rcpp sf units]; }; APCI = derive2 { name="APCI"; version="0.1.0"; sha256="01fxj9vpyhkms8d3hhzsijmdfv4c09v60mymrxsf8j56436f5i9r"; depends=[data_table dplyr ggplot2 ggpubr haven magrittr stringr survey tidyverse]; }; APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; }; APFr = derive2 { name="APFr"; version="1.0.2"; sha256="1vax7rfccds6qz3bi6n1h3nzl9jnxpwk331wmpsbqlk23md3m4g4"; depends=[]; }; APIS = derive2 { name="APIS"; version="1.0.1"; sha256="1af82mixamllly7v1jfvn1anpm1pafkv5mshwp6nmc27vaq201z5"; depends=[doParallel foreach ggplot2 gridExtra]; }; + APML = derive2 { name="APML"; version="0.0.2"; sha256="08krjwc807k72ir27p6rpipk8am8q4cj8nblc15mf6i234rg1s88"; depends=[dplyr dummies ggplot2 h2o performanceEstimation pROC survival tidyverse]; }; APML0 = derive2 { name="APML0"; version="0.10"; sha256="1l6mw1mqb7qnsvfv9w6yydqjsrwrsrqx3bpifyp43cf2q71yx5gp"; depends=[Matrix Rcpp RcppEigen]; }; APPEstimation = derive2 { name="APPEstimation"; version="0.1.1"; sha256="1bg9ma4i3k3xdgyk2h4f368gqnczvlhvjw4114iznmrv1wl4g25c"; depends=[densratio]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; @@ -96,11 +98,12 @@ in with self; { ARHT = derive2 { name="ARHT"; version="0.1.0"; sha256="1fz81a202r8vk655dg6a03zfq3gfkimqjvmc95k3j02xz0iv58kn"; depends=[]; }; ARIbrain = derive2 { name="ARIbrain"; version="0.2"; sha256="18c7yxkrnqh18gcfzvdc5wqig6ywdmjcy8rlz0fdj3b8fb84dfpr"; depends=[hommel plyr RNifti]; }; AROC = derive2 { name="AROC"; version="1.0-3"; sha256="07kzkb0mlx8nj8c0kz2b6in51biwawv7vvqqkg0h5zfj92k26hdb"; depends=[Hmisc MASS Matrix moments nor1mix np spatstat spatstat_geom]; }; + ARPALData = derive2 { name="ARPALData"; version="1.2.0"; sha256="13sn1vx63b20j69k9mzjj9a13j27ni8kr2v465kr979bsbi7xb64"; depends=[aweek data_table doParallel dplyr eurostat ggplot2 lubridate magrittr purrr readr rlang RSocrata sf stringi stringr tibble tidyr tidyselect tidyverse tm]; }; ARPobservation = derive2 { name="ARPobservation"; version="1.2.1"; sha256="1gpq5wl3mwp4hi49h1g6nnizzpnfc19pv8chdyhv8y5sraq1k2ag"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTP2 = derive2 { name="ARTP2"; version="0.9.45"; sha256="12nqxry2jkl1n07rbms38mrnp39cn00d0h272d9f1z5x883flv62"; depends=[data_table Formula]; }; ARTool = derive2 { name="ARTool"; version="0.11.0"; sha256="0mn935rsmppgxbbz4lkyzldpmyg7c2lxhlh8slipw8q8xdqz617l"; depends=[car dplyr emmeans lme4 magrittr plyr]; }; - ARpLMEC = derive2 { name="ARpLMEC"; version="1.1"; sha256="1arn9cks6jbj0rk1r915bw92ac70jfk2b13zwgk78npxbwrnm80x"; depends=[gmm lmec MASS Matrix mnormt mvtnorm numDeriv sandwich tmvtnorm]; }; + ARpLMEC = derive2 { name="ARpLMEC"; version="2.1"; sha256="0fj5mcaqpvgcwb6zp8yc5747clm6js99r3lqx5d3536w6k0f51r0"; depends=[gmm lmec MASS Matrix mnormt MomTrunc mvtnorm numDeriv sandwich tmvtnorm TTmoment]; }; ASGS_foyer = derive2 { name="ASGS.foyer"; version="0.3.1"; sha256="089c4vm629rni0dfgg3r2a9s9yisdx1qs2dwssg44qw1w4hf1f50"; depends=[sp]; }; ASIP = derive2 { name="ASIP"; version="0.4.9"; sha256="06f1nvy920vyx3bmdi77mwvfsn32xsfxaslhagnf1zh652vfkbwi"; depends=[raster rgdal stringr]; }; ASMap = derive2 { name="ASMap"; version="1.0-4"; sha256="0xnrl8jhbvbc789w5gc9dz7j7gzc7wsc94a3d2wdplrmxn186nrb"; depends=[fields gtools lattice qtl RColorBrewer]; }; @@ -132,17 +135,16 @@ in with self; { ActivePathways = derive2 { name="ActivePathways"; version="1.0.2"; sha256="1hxy760x141ykrpqdbfldq4ggj1svj3lsrpwi4rb2x7r4lna937l"; depends=[data_table ggplot2]; }; ActivityIndex = derive2 { name="ActivityIndex"; version="0.3.7"; sha256="1zj2b6x31a1kxl80rarmkrlm7ack4154mrkbqs3fpi48zpmjbgd5"; depends=[data_table matrixStats R_utils]; }; AcuityView = derive2 { name="AcuityView"; version="0.1"; sha256="0f0iclmnwdc8ixiiai4svk4x1g3pjy7dhm3cm58fv6ckx12d3d2l"; depends=[fftwtools imager plotrix]; }; - AdMit = derive2 { name="AdMit"; version="2.1.6"; sha256="0liql0xzm147xyksji5gj4b0vjl36a1g2pingsylr6rs8gw5m19y"; depends=[mvtnorm]; }; + AdMit = derive2 { name="AdMit"; version="2.1.8"; sha256="0fp2y6cxl9iklvd4w6igmwr2qi5vpqyl7rzli48cxz1pvgb9qz4x"; depends=[mvtnorm]; }; AdaSampling = derive2 { name="AdaSampling"; version="1.3"; sha256="1c8dh8lxyb076317n4qk2g3qv5j4mc1dszbh3k1p2b0nxiprqk5i"; depends=[caret class e1071 MASS]; }; AdapEnetClass = derive2 { name="AdapEnetClass"; version="1.2"; sha256="01k3mj4g1ckbng7wkzzn9h0k9yf01cpnnkly0sjda574c5jhj0rc"; depends=[glmnet imputeYn lars quadprog]; }; AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; - AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.67"; sha256="0s8vv960pkbccpwlfsg1jsfjnfmq9iy8cj1fak5fn2s60zb7nm0a"; depends=[MASS mgcv nlme SemiPar]; }; AdaptGauss = derive2 { name="AdaptGauss"; version="1.5.6"; sha256="076jjnqp4ayq4kh95qns4kfzfvl6mjllhsq6hfp66bww7w976xxh"; depends=[DataVisualizations pracma Rcpp shiny]; }; AdaptiveSparsity = derive2 { name="AdaptiveSparsity"; version="1.6"; sha256="0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"; depends=[MASS Matrix Rcpp RcppArmadillo]; }; AdequacyModel = derive2 { name="AdequacyModel"; version="2.0.0"; sha256="0amp6ic1wylk24sp9wpx3ci38njj7b9qjqfp89j39hkl6kc1q7sq"; depends=[]; }; - AdhereR = derive2 { name="AdhereR"; version="0.6.1"; sha256="1h7izwm6fsvd5qi1w0jhf2brf55qcdl203sv7bn1z4gp398iiwc4"; depends=[data_table jpeg lubridate png webp]; }; - AdhereRViz = derive2 { name="AdhereRViz"; version="0.1.0"; sha256="0lb5yral2gf0mjqyqwz2qcd5g2dmsxf590cdqi9f0xss5kwka5j5"; depends=[AdhereR clipr colourpicker data_table DBI haven highlight knitr lubridate manipulate readODS readxl RMariaDB RSQLite rsvg scales shiny shinyjs shinyWidgets V8 viridisLite]; }; + AdhereR = derive2 { name="AdhereR"; version="0.7.0"; sha256="14lggmyzj4csjh559153ay2xhxqz31znn6a2xbk2jdhk64sa0hxb"; depends=[data_table jpeg lubridate png rsvg webp]; }; + AdhereRViz = derive2 { name="AdhereRViz"; version="0.2.0"; sha256="118gji5clqc62nd05n2cl6p7jamljk633f5j5wxzbzfalrgdwic2"; depends=[AdhereR clipr colourpicker data_table DBI highlight knitr lubridate manipulate RMariaDB RSQLite rsvg scales shiny shinyjs shinyWidgets V8 viridisLite]; }; AdjBQR = derive2 { name="AdjBQR"; version="1.0"; sha256="14437pyz9v09ighwqvy1lcw0vfp2gaqzs9nzrb1gkfbb8ndzjw7k"; depends=[coda MHadaptive quantreg survival]; }; AdvBinomApps = derive2 { name="AdvBinomApps"; version="1.0"; sha256="1cnmn6c2dyl8qfl7g5sqwbjb52psqxzrj1mbm06zak2y1j7j8f49"; depends=[GenBinomApps rootSolve]; }; AdvDif4 = derive2 { name="AdvDif4"; version="0.7.18"; sha256="1xdbk7w55cb2fh0mqlyrkdpnglrs55kyvvp32anvf2nw3ssrfmy7"; depends=[]; }; @@ -150,6 +152,8 @@ in with self; { AeRobiology = derive2 { name="AeRobiology"; version="2.0.1"; sha256="14d5gjx53v2wfij8m4br0k7lfi6x2frc8ny1li4g8c05qv2dvnbb"; depends=[circular data_table dplyr ggplot2 ggvis lubridate plotly scales tidyr writexl zoo]; }; AggregateR = derive2 { name="AggregateR"; version="0.1.1"; sha256="1s2q888bqx6ilisv5s4g8ryja97nz6cz4ycm4sw1i63l5wjrwljc"; depends=[data_table NCmisc tibble]; }; AgreementInterval = derive2 { name="AgreementInterval"; version="0.1.1"; sha256="1bvinzylvsaipa8mq15f45b6h37znavlrdl0rbrx1pqw52r7z8kv"; depends=[psych]; }; + AgroR = derive2 { name="AgroR"; version="1.2.3"; sha256="0vyn7jrk6g4m8srjc0qdn1yxygx8phr0zwnl86ng05hl78d1x35h"; depends=[ARTool cowplot crayon drc emmeans ggplot2 ggrepel gridExtra Hmisc hnp lme4 lmtest MASS multcomp multcompView nortest RColorBrewer reshape2 ScottKnott stringr]; }; + AgroReg = derive2 { name="AgroReg"; version="1.1.0"; sha256="0kb2fv64x07phi41ypmylk39n8pj4cvxcrfhhfaajppymna851q1"; depends=[boot broom car crayon dplyr drc ggplot2 minpack_lm rcompanion]; }; AhoCorasickTrie = derive2 { name="AhoCorasickTrie"; version="0.1.2"; sha256="0zh3y5jd8m0xbj6lqr01zvwj9qd1xr3iq7vd6sgr3g3qh4kqm5pq"; depends=[Rcpp]; }; AirSensor = derive2 { name="AirSensor"; version="1.0.8"; sha256="0wpfg3mry1vdyd9v1981hasizj1mn5wy60ig9swxlqdm7j11wxan"; depends=[countrycode cowplot dplyr dygraphs geodist geosphere GGally ggmap ggplot2 gridExtra httpcode httr jsonlite leaflet lubridate magrittr MazamaCoreUtils MazamaLocationUtils MazamaSpatialUtils openair PWFSLSmoke RColorBrewer readr rlang scales seismicRoll sp stringr tibble tidyr tidyselect worldmet xts zoo]; }; Ake = derive2 { name="Ake"; version="1.0"; sha256="1dj598xfdyjqvysc39a0d5gizgk367c5lkddmwmsqa8zjmvpr15a"; depends=[]; }; @@ -157,14 +161,14 @@ in with self; { AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; - AlleleShift = derive2 { name="AlleleShift"; version="1.0-1"; sha256="09qq5jm3jhhq4373k13shyvdjkcfzh5h93jylpfnd0j16ipp66vf"; depends=[adegenet BiodiversityR vegan]; }; - AlphaPart = derive2 { name="AlphaPart"; version="0.8.1"; sha256="0gmiwx6f1bzyakz6yz9bk25xlys7rlapglrqv5qkmn4l4ddqyhwq"; depends=[directlabels gdata ggplot2 pedigree Rcpp reshape]; }; - AlphaSimR = derive2 { name="AlphaSimR"; version="0.13.0"; sha256="0rhdj7gy8k6nfdczg1y5xa0lhjmsxr9g7cpd0z68mxdzycrchhvl"; depends=[BH R6 Rcpp RcppArmadillo]; }; + AlleleShift = derive2 { name="AlleleShift"; version="1.0-2"; sha256="0pmjh5nq67fxnwlszp5rlmnmzg4gdjkr9dzaz6b0p7vh2cfy9m45"; depends=[adegenet BiodiversityR vegan]; }; + AlphaPart = derive2 { name="AlphaPart"; version="0.8.2"; sha256="1d7qh8a5xbjibzj529h24pa5q278ibznvjnfq0ydk5r02wfqmhn4"; depends=[directlabels gdata ggplot2 pedigree Rcpp reshape]; }; + AlphaSimR = derive2 { name="AlphaSimR"; version="1.0.4"; sha256="115rn03dgpgcb5h9f2f5rz7kmlrfqdr0xdw7l9f4v7wkbdmr9h0l"; depends=[BH R6 Rcpp RcppArmadillo]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; - Amelia = derive2 { name="Amelia"; version="1.7.6"; sha256="1shvc8x1kmb0cincgggsv5c5w25k36kqvisdqd3ayy5g98vqvh33"; depends=[foreign Rcpp RcppArmadillo]; }; + Amelia = derive2 { name="Amelia"; version="1.8.0"; sha256="0plrnmlwn91bmrx8ip83nqb15ykjxjl6m49788sinq5cinkdbh9y"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; AmesHousing = derive2 { name="AmesHousing"; version="0.0.4"; sha256="080r0fkmqsdrjgwbmdzacnkmd8py611z54i6r7nzj14r295d5qhk"; depends=[dplyr magrittr]; }; - AmigaFFH = derive2 { name="AmigaFFH"; version="0.3.1"; sha256="0mvw5zr7l29fgm6dan285gjnmmzz59a19v8b2w4j035jzbf1vffw"; depends=[tuneR]; }; + AmigaFFH = derive2 { name="AmigaFFH"; version="0.4.1"; sha256="1iv89nqlqc5lrnz9r56ajgmb54pkk1zafihh1m0528i0hg4l7qxm"; depends=[tuneR vctrs]; }; AmmoniaConcentration = derive2 { name="AmmoniaConcentration"; version="0.1"; sha256="05pnwfji9l9az4jvni6jy7cayzg5pbspz82a63kmj6rgibn4ywvn"; depends=[]; }; AmpGram = derive2 { name="AmpGram"; version="1.0"; sha256="1j5zx6n8cyzh6dnv96234zmlfj90fs9w4vm32xw8iqgvpcviqyz6"; depends=[biogram devtools pbapply ranger shiny stringi]; }; AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1.1"; sha256="0vw06x47vc0dqzafgpkn4abdsrhxfs9dq8nnrr2pl49skj5n4hks"; depends=[ggplot2 xtable]; }; @@ -174,18 +178,20 @@ in with self; { AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-23"; sha256="0i4llbd0h266y26j1skkgmlsbvg4imka5zyd951n2bl1zr7wlds2"; depends=[fastICA R_matlab]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; AnchorRegression = derive2 { name="AnchorRegression"; version="0.1.3"; sha256="1bmlxk5j3i9mm71cwz785q5sysp8hsyy0080kgd3ksx78p68ara5"; depends=[glmnet mgcv selectiveInference]; }; - Andromeda = derive2 { name="Andromeda"; version="0.4.1"; sha256="1135sqz54g6pw0z4c7r0kdz296arjxvny3d5xg9ns6xwqwjnfy70"; depends=[cli DBI dbplyr dplyr pillar rlang RSQLite tidyselect zip]; }; + Andromeda = derive2 { name="Andromeda"; version="0.5.0"; sha256="1cr4lhaf6h2albipn23ly4h9d84krva92kdj36a8z0m646273rlp"; depends=[cli DBI dbplyr dplyr hms pillar rlang RSQLite tidyselect zip]; }; AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.2"; sha256="1nhd0i30g5wb5jh96gfaa0lgnbnj0m2vy4gz7v2c3142396zalnx"; depends=[dplyr ggplot2]; }; - AnimalAPD = derive2 { name="AnimalAPD"; version="1.0.0"; sha256="1csa6disrg11hpxg4zw0jay15srw9lsgbhl1xgl7hpdr3nqsv3s7"; depends=[activityGCMM brms circular ggplot2 gridExtra loo overlap]; }; AnimalHabitatNetwork = derive2 { name="AnimalHabitatNetwork"; version="0.1.0"; sha256="1bhqypkiw5v9w26jbdmhndqj5hjfmf7zwivrq2hgs0zcjxwa8gfn"; depends=[ggplot2 igraph]; }; + AnnoProbe = derive2 { name="AnnoProbe"; version="0.1.6"; sha256="182m711l5m037mfyvr6334pmv338fxb3007j6713abvylsh6x06q"; depends=[Biobase DT ggplot2 ggpubr pheatmap]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.3.0"; sha256="1q5yxzzmzvw1r64r4y0xh1fiyhaqbx5q4lzpawqaggra4w9igdl8"; depends=[ape seqinr]; }; AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; }; AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; + AntMAN = derive2 { name="AntMAN"; version="1.1.0"; sha256="118jhjjfnp23kbkir66rdvlzsvms316zwr2r5msrjrb3nd8lz5va"; depends=[bayesplot GGally mcclust mvtnorm Rcpp RcppArmadillo Rdpack salso]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; AnthropMMD = derive2 { name="AnthropMMD"; version="3.1.0"; sha256="10ms5akc2r9dmcm8dd8bn7qn0bq71c270yhs61981n4mxsvgjmnr"; depends=[plotrix scatterplot3d shiny smacof]; }; Anthropometry = derive2 { name="Anthropometry"; version="1.15"; sha256="03xw0ggb2qqlldrv0qpjwmncnari742habb46im7y65bhgnr2awx"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; }; + AovBay = derive2 { name="AovBay"; version="0.1.0"; sha256="110y9wbqr0m9b6wr1c5mncrdjpg247308989bswkqnim2msvnzcf"; depends=[BayesFactor BH broom car dplyr DT highcharter htmltools moments nortest purrr Rcpp RcppEigen RcppParallel reshape rstan rstantools shiny shinycssloaders shinydashboard shinydashboardPlus StanHeaders stringr tibble waiter]; }; ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.3"; sha256="0h4snigh1yhp34vw52h4b6qbh9c4cvwz2cx8fwvbnw6lslmg5cgv"; depends=[doParallel foreach stringr]; }; AppliedPredictiveModeling = derive2 { name="AppliedPredictiveModeling"; version="1.1-7"; sha256="1wi0sw5w1c51rmh9z98wdpk5rgzsylkkb6g019djiwxvj92l99hh"; depends=[CORElearn ellipse lattice MASS plyr reshape2]; }; AquaEnv = derive2 { name="AquaEnv"; version="1.0-4"; sha256="07yx7mbslqgqg7ky67n3xfhskaj7s3w5mvl7xkih48xbsdlmxi4l"; depends=[minpack_lm]; }; @@ -195,9 +201,9 @@ in with self; { ArchaeoChron = derive2 { name="ArchaeoChron"; version="0.1"; sha256="1qma2432mm73h72g9ah1k02wlcb6yrhc6mpai9nj7v58s126ffxn"; depends=[ArchaeoPhases Bchron coda rjags]; }; ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.5"; sha256="1jp5ip595vvni1iqqm5wiqmqw9g2d1vvvwl06cr8qj8yh4n6xsfw"; depends=[coda digest dplyr DT ggalt ggplot2 ggthemes gplots hdrcde magrittr readr reshape2 shiny shinythemes tibble toOrdinal]; }; ArchaeoPhases_dataset = derive2 { name="ArchaeoPhases.dataset"; version="0.1.0"; sha256="1bwfw3azhz4cbcinimj1nnmz04zw4lmn3bh419w73jmcswqrym0n"; depends=[]; }; - Arothron = derive2 { name="Arothron"; version="2.0.1"; sha256="10gfw64y34dvds72s1fj2dphm18nc3xrnvadxarq89aaxsknil3h"; depends=[abind alphashape3d compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; + Arothron = derive2 { name="Arothron"; version="2.0.2"; sha256="1xxj06np7dib5fck0jcf46n3bflb4xvc596hwkvp75irrx861brw"; depends=[abind alphashape3d compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; AsioHeaders = derive2 { name="AsioHeaders"; version="1.16.1-1"; sha256="0hp08v6if476745v2mk9k2sp1ikiac94fcnp8v9jdcyx954fqqlq"; depends=[]; }; - AssetCorr = derive2 { name="AssetCorr"; version="1.0.3"; sha256="0xcyj9xw895p4j03j9c76k7ylhkmf777akg4m90av12ad05njjbv"; depends=[boot ggplot2 mvQuad mvtnorm numDeriv Rdpack VineCopula]; }; + AssetCorr = derive2 { name="AssetCorr"; version="1.0.4"; sha256="0r98li2lxhfap1hn6h0l78phpm9m1nlcqhwzpq0ahhw0b1rd4qkf"; depends=[boot ggplot2 knitr mvQuad mvtnorm numDeriv qpdf Rdpack VineCopula]; }; AssetPricing = derive2 { name="AssetPricing"; version="1.0-1"; sha256="0pbb1362dgdipbj3h50ykissl3gdqf1j1mpq53ixprvyc966c5h4"; depends=[deSolve polynom]; }; AssocAFC = derive2 { name="AssocAFC"; version="1.0.2"; sha256="1rjiiir472dnr15xyvpn81s62nf01gl70khr8mrni65ssp5m30fb"; depends=[CompQuadForm]; }; AssocTests = derive2 { name="AssocTests"; version="1.0-1"; sha256="1wp5swnpd6m5g4zm14lllclmw058513n1g3kq1iqc0acjavkqy17"; depends=[cluster combinat fExtremes mvtnorm]; }; @@ -205,27 +211,30 @@ in with self; { AsthmaNHANES = derive2 { name="AsthmaNHANES"; version="1.1.0"; sha256="106c6fh20s98fzixs4jpa4d413himrfg31rzwsxp72yldqxg70fx"; depends=[]; }; AsyK = derive2 { name="AsyK"; version="1.5.4"; sha256="0l2d6h1i5bvxizvcjq15z0dhq274qz07fq6hh4j6d6ifm0z34829"; depends=[decon ICV kedd kerdiest KernSmooth ks locfit OSCV sm]; }; AsynchLong = derive2 { name="AsynchLong"; version="2.1"; sha256="111kg1cacqlz4df1lnijybnrifjscjm78ji9p0ia615gacvdcfxa"; depends=[]; }; - AtmChile = derive2 { name="AtmChile"; version="0.1.0"; sha256="03kygn5pxj5rclcq6r1nqf74jr6k65hcl52jvrlmf2w0d888925z"; depends=[data_table]; }; + AtmChile = derive2 { name="AtmChile"; version="0.2.0"; sha256="0hrga00jsg6k7cjck7a4pqj0gx8n4issblp372vxhnpa5slqy1gg"; depends=[data_table DT lubridate openair plotly shiny shinycssloaders]; }; AtmRay = derive2 { name="AtmRay"; version="1.31"; sha256="162078jd032i72sgaar9hqcnn1lh60ajcqpsz4l5ysxfkghcxlh8"; depends=[]; }; AugmenterR = derive2 { name="AugmenterR"; version="0.1.0"; sha256="0hi501p8ksaqzc9dq16dbmkz50kakgw3k0awdkbpci5can2sqvfl"; depends=[]; }; AurieLSHGaussian = derive2 { name="AurieLSHGaussian"; version="0.2.0"; sha256="0dzwqv396inbx4r6758vr4gip1y42ahavspadgm4xhafvipg73rb"; depends=[flexclust igraph lsa reshape2 stringdist]; }; AutoDeskR = derive2 { name="AutoDeskR"; version="0.1.3"; sha256="1n7c8ris8b517bs1wahpvrhwfbvn2q4jbq01kgiv9lfmkjckzfkc"; depends=[httr jsonlite shiny]; }; AutoPipe = derive2 { name="AutoPipe"; version="0.1.6"; sha256="0bzllh92fgsmz79lh6m2f10vsx5qng4l7bwbwkp2kzwnncy7cq63"; depends=[annotate cluster clusterProfiler ConsensusClusterPlus fgsea msigdbr org_Hs_eg_db pamr RColorBrewer Rtsne siggenes]; }; AutoSEARCH = derive2 { name="AutoSEARCH"; version="1.5"; sha256="1s2ldhxijd8n9ba78faik6gn4f07pdzksy0030pqyafxlr3v1qdj"; depends=[lgarch zoo]; }; + AutoScore = derive2 { name="AutoScore"; version="0.2.0"; sha256="0rj8ksmj4yw9xsapz73b4gf46r6is1psaxgvmb9ja0vim5m9cj38"; depends=[ggplot2 knitr pROC randomForest tableone]; }; AutoStepwiseGLM = derive2 { name="AutoStepwiseGLM"; version="0.2.0"; sha256="0wwi8hg2q1zkf28rq7bj0f9fcxc5hj59hkmk0gl9p8i3rghlyrms"; depends=[caret formula_tools]; }; Autoplotprotein = derive2 { name="Autoplotprotein"; version="1.1"; sha256="13mxqmhhdiq7mz4m6nx39dsq7x3bm8fsgskswx48vsq6x2k6byxa"; depends=[ade4 plotrix plyr seqinr XML]; }; AutoregressionMDE = derive2 { name="AutoregressionMDE"; version="1.0"; sha256="1dmg0q4sp2d2anzhw2my8xjhpyjsx0kf7r202q5bkw8yr57jnhvr"; depends=[]; }; Autoseed = derive2 { name="Autoseed"; version="0.1.0"; sha256="0xr3sjfccvp8h18jqxzajb2pfn4nm8q9maic6k9zzr15fxvphiy5"; depends=[]; }; - AzureAuth = derive2 { name="AzureAuth"; version="1.3.1"; sha256="1ybx5p15i04n86yqc3wsyq93g48rccsw2xz730qr2if5lnw7k97r"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; + AvInertia = derive2 { name="AvInertia"; version="0.0.1"; sha256="0s7syd3jas2gzqzswv0nj2d1q0sjfqgjayr5ds2w8i4fzsi9zdvz"; depends=[ggplot2 ggthemes pracma readxl reshape2 stringr tidyr]; }; + AzureAppInsights = derive2 { name="AzureAppInsights"; version="0.2.0"; sha256="1h8bsy6lshjxccwv6h9mwsahp8gmk0c0nnvdr8j6zgdnxraxv9lm"; depends=[assertthat jsonlite lubridate rlang shiny]; }; + AzureAuth = derive2 { name="AzureAuth"; version="1.3.3"; sha256="1arr7vbcj9ibrx826md487hcmlch46b2h3r03a14wxq6ssxj4x0z"; depends=[httr jose jsonlite openssl R6 rappdirs]; }; AzureCognitive = derive2 { name="AzureCognitive"; version="1.0.1"; sha256="1mn3qw5g77x24qyhybhn1p3h4s9ymdafrj35i24f32ncr5abnd2f"; depends=[AzureAuth AzureRMR httr jsonlite]; }; - AzureContainers = derive2 { name="AzureContainers"; version="1.3.1"; sha256="1ms576p6g0lkm3b7jzj9b6b0phdrz4z8ws1nsrvdhn13s33zwrzi"; depends=[AzureGraph AzureRMR httr openssl processx R6]; }; + AzureContainers = derive2 { name="AzureContainers"; version="1.3.2"; sha256="0lykvf4kk1q7b7ln4l8jlrxgqyvrg1cfnap4ak8zkhxmrgzqpc5f"; depends=[AzureGraph AzureRMR httr openssl processx R6]; }; AzureCosmosR = derive2 { name="AzureCosmosR"; version="1.0.0"; sha256="07bpmjxfyzk1aq8r06biiqsn2ibv7ymgqccxfxkbvszpfq79nryj"; depends=[AzureRMR curl httr jsonlite openssl uuid vctrs]; }; - AzureGraph = derive2 { name="AzureGraph"; version="1.3.0"; sha256="0cc2gxkjxzwsnvglkx2pcvi43wq7dlpbam00cf8w8k1x4fxsdwvb"; depends=[AzureAuth curl httr jsonlite openssl R6]; }; - AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.4"; sha256="0b56z3b2f6l58gy2z3zy3sx3kpagvywr8dasl65qvg4ha6wbz3xg"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; + AzureGraph = derive2 { name="AzureGraph"; version="1.3.1"; sha256="0afh98gj2klmxqidskamw0hp4b6cwap3y8gnf660np0j8szdy67i"; depends=[AzureAuth curl httr jsonlite openssl R6]; }; + AzureKeyVault = derive2 { name="AzureKeyVault"; version="1.0.5"; sha256="15x0mkgn7pq2yk05l5vwvd744gxkz28nb5azc1yz502ayr1s6hnm"; depends=[AzureAuth AzureGraph AzureRMR httr jose jsonlite openssl R6]; }; AzureKusto = derive2 { name="AzureKusto"; version="1.0.6"; sha256="02wj1nzbs9l6aapk94p89gahbffmk3gy80l57bd1l0afpw0y3jr8"; depends=[AzureAuth AzureRMR DBI dplyr httr jsonlite openssl R6 rlang tibble tidyselect]; }; AzureQstor = derive2 { name="AzureQstor"; version="1.0.1"; sha256="1z7j8kakiarpw3q2rii7gl9zc2nsb49nzs1nxg1hgfyvcdhw2fcg"; depends=[AzureRMR AzureStor httr openssl]; }; - AzureRMR = derive2 { name="AzureRMR"; version="2.4.1"; sha256="1nyz54qfnwhx3qvva4gscfp4b8krk2mvxqzks2qqfrlmjlfilhp6"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; - AzureStor = derive2 { name="AzureStor"; version="3.4.1"; sha256="051m41kh1m0mmsxnap2cs917c860q91b55ilb8x66bbpf0xmb9vp"; depends=[AzureRMR httr mime openssl R6 xml2]; }; + AzureRMR = derive2 { name="AzureRMR"; version="2.4.2"; sha256="0vjsbr56vl6j5mm6sbf127k06cmb9adbzapp5njl63181c11nx6g"; depends=[AzureAuth AzureGraph httr jsonlite R6 uuid]; }; + AzureStor = derive2 { name="AzureStor"; version="3.5.1"; sha256="13xygdfmvr41ckrlw278nayn7lkx2w9f398qzj342rffnqlqz1i0"; depends=[AzureRMR httr mime openssl R6 xml2]; }; AzureTableStor = derive2 { name="AzureTableStor"; version="1.0.0"; sha256="0xrfpi9psn1h21g4mvcbqsjav56s8cha381vsjkp1swilrxhmk5l"; depends=[AzureRMR AzureStor httr jsonlite openssl uuid vctrs]; }; AzureVM = derive2 { name="AzureVM"; version="2.2.2"; sha256="0766a4y17qgq3vgb398n6zn8sdjrv65gpvrnr9b9g89zdsdy9fc4"; depends=[AzureRMR jsonlite R6]; }; AzureVMmetadata = derive2 { name="AzureVMmetadata"; version="1.0.1"; sha256="15ghijzva6qzq2riq8ci4bh6ssknnp15yyy1fql0k4878wkf7vs0"; depends=[httr openssl]; }; @@ -234,11 +243,11 @@ in with self; { BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; BAEssd = derive2 { name="BAEssd"; version="1.0.1"; sha256="04wkhcj4wm93hvmfnnzryswaylnxz5qsgnqky9lsx4jqhvg340l6"; depends=[mvtnorm]; }; - BAGofT = derive2 { name="BAGofT"; version="0.1.0"; sha256="1vhi92afvrrj7cvlzszh5ivzkd9bpw2c6rs1p8y0fyyj8k0gl8pa"; depends=[stringr]; }; + BAGofT = derive2 { name="BAGofT"; version="1.0.0"; sha256="0lvjygnphb2d5cammmswlnyn77vmy3k46r8hh8f3mfr7i68gcdvz"; depends=[dcov randomForest]; }; BALCONY = derive2 { name="BALCONY"; version="0.2.10"; sha256="1wfy0dmwfzd9jp6g92ld8jqzx97grgq4h6dy4y5063vfd9i4slwx"; depends=[Biostrings dplyr progress readr Rpdb scales seqinr]; }; BALD = derive2 { name="BALD"; version="1.0.0-3"; sha256="1azyqami07g3ax60j0ws3d1qha65k0svn2v5c9pisni0qch5xql0"; depends=[lattice logspline rjags]; }; BALLI = derive2 { name="BALLI"; version="0.2.0"; sha256="0qmjwpj56n07dvjwfknqvc02f0y5mlwh2yz4lrw7c4wqgrckcpgi"; depends=[edgeR limma MASS]; }; - BAMBI = derive2 { name="BAMBI"; version="2.3.0"; sha256="0b9zbnb56rzwb8bfv3yq84vzbjr1agcil46xwsjh9zg3vl8jp99h"; depends=[bridgesampling coda future_apply gtools label_switching lattice loo mvtnorm numDeriv qrng RColorBrewer Rcpp RcppArmadillo scales]; }; + BAMBI = derive2 { name="BAMBI"; version="2.3.2"; sha256="169d85k3vf0n88jmgw0g88r45y9xqh412rki0anbcwimjzkg3s7x"; depends=[bridgesampling coda future_apply gtools label_switching lattice loo mvtnorm numDeriv qrng RColorBrewer Rcpp RcppArmadillo scales]; }; BAMMtools = derive2 { name="BAMMtools"; version="2.1.7"; sha256="1xpks3in0mj1b82z3ax2k3q06bgr3sj0nhr2dbs2crbvszb8hcp2"; depends=[ape gplots Rcpp]; }; BANOVA = derive2 { name="BANOVA"; version="1.2.0"; sha256="0zyfgcx6wxrl9vgdpbzcs8pb6irmyagknjkcl1x30pzlj4dlx3kg"; depends=[coda rjags rstan runjags]; }; BARIS = derive2 { name="BARIS"; version="1.1.1"; sha256="1h1zrgpn69nvz61567c08vfynmzy70g31a37wp4p6g8wri1hr7xg"; depends=[checkmate data_table downloader dplyr httr janitor jsonlite magrittr memoise miniUI rgdal rio rstudioapi sf shiny stringi stringr XML]; }; @@ -247,9 +256,9 @@ in with self; { BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="1.2.2"; sha256="14zimfdkpsil22n1z4ldpi9smmja5kf7qqlklr5sr7y5avnh0hd9"; depends=[hypergeo truncdist]; }; BASiNET = derive2 { name="BASiNET"; version="0.0.4"; sha256="0pmn4znqhpav729ai7zr027a7sx6bz2lmlk086crmwm1fnwipqq4"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; - BAT = derive2 { name="BAT"; version="2.5.1"; sha256="1rx7kb9d8n653lkml9acfcykfp0azsrm9n1hyx5mlxl511rv9ixr"; depends=[geometry hypervolume nls2 raster vegan]; }; + BAT = derive2 { name="BAT"; version="2.7.0"; sha256="1x3j1drrz2d1p91k17lqsazb3f6i0nmb5vc2ycwh1ca84njdzghq"; depends=[ape geometry hypervolume MASS nls2 raster vegan]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; - BAwiR = derive2 { name="BAwiR"; version="1.2.6"; sha256="06ib2xby22cii230vcirnwh9wvda029mjz5y2jlwrxr555hxdqkc"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tibble tidyr xml2]; }; + BAwiR = derive2 { name="BAwiR"; version="1.2.7"; sha256="1vvym7bbfbi1x91962nfcqql0fiyv4svdk5329rq43nnh188i456"; depends=[Anthropometry dplyr ggplot2 ggthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tibble tidyr xml2]; }; BB = derive2 { name="BB"; version="2019.10-1"; sha256="0kf9sfsm3n036a8a8gjfpc9qdryvadb019kqjh80n1szdv7bdl04"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-8"; sha256="0j3ykxsmxima75h40mhqm32l2ffc27pk11rfzjyvv1cm6q2q3gbh"; depends=[aws DEoptim ggplot2 reshape2 shiny]; }; BBI = derive2 { name="BBI"; version="0.3.0"; sha256="167sndfp3776p8n9zdpihc9xhqqi8wygzpl49dzkfj53gwa77rnn"; depends=[vegan]; }; @@ -257,7 +266,6 @@ in with self; { BBMV = derive2 { name="BBMV"; version="2.1"; sha256="11d4wd1zx99hrhwagw73jkk088rz5vgkjml6mckssc2iqvhj1dc9"; depends=[ape]; }; BBRecapture = derive2 { name="BBRecapture"; version="0.2"; sha256="1w0m8p4mwjsycv9krmsgdyjckic2nwxbyhrz1s2gng2v1h20zvlf"; depends=[HI lme4 locfit secr]; }; BBSSL = derive2 { name="BBSSL"; version="0.1.0"; sha256="0vb3afbx8p3frliy92sf2wlmx32rasxj39i8d023m2dvsblbh50x"; depends=[glmnet greybox Matrix mvnfast rmutil statmod svMisc truncnorm]; }; - BBcor = derive2 { name="BBcor"; version="1.0.1"; sha256="1rcd8scaz2mdsf7wg787wzgvbvfvdyc40j17jn4y5j6yd54dbl8m"; depends=[bayeslincom pbapply psych wdm]; }; BBmisc = derive2 { name="BBmisc"; version="1.11"; sha256="1lh1n4bvxzivb5rbz69mvd8xdgr3gr2bnqd68a39sd1530l8r90y"; depends=[checkmate]; }; BCA = derive2 { name="BCA"; version="0.9-3"; sha256="0ksd6b0ykydgdn33x29bwwqkrp23cvdj3imps0l6qs1p4465j5nf"; depends=[car clv flexclust Rcmdr RcmdrMisc rpart]; }; BCA1SG = derive2 { name="BCA1SG"; version="0.1.0"; sha256="14jvi5gn19f72szcnyhfpdld00cc7gyih5qrm4bpzvp553f1svvk"; depends=[logOfGamma Matrix]; }; @@ -278,42 +286,42 @@ in with self; { BDP2 = derive2 { name="BDP2"; version="0.1.3"; sha256="14m85sigx6hk0qzhfgih43m2lxp9xczmp9g3z4pping6msbnbdrz"; depends=[rmarkdown shiny shinyBS]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; BDgraph = derive2 { name="BDgraph"; version="2.64"; sha256="0pnzbw09c7amsvj8l4p1jnmss4rkbr1dsmagiygh8lj5fbrklgr4"; depends=[igraph]; }; - BE = derive2 { name="BE"; version="0.1.2"; sha256="0y67jvlakpga21r0gxmbp0kdmnvcvikgnjsi5g715vh79612sbb2"; depends=[rtf]; }; + BE = derive2 { name="BE"; version="0.1.3"; sha256="14x6x0i5j5sxqk700am8kf73iv1bx8ba9563acgrjmp0c960p5f8"; depends=[rtf]; }; BEACH = derive2 { name="BEACH"; version="1.3.1"; sha256="0biq6c74k8vb8ykafzf3blyi08rp65x1vaw3bfpwdc1ihc9wrgjr"; depends=[devtools DT haven plyr rJava rtf sas7bdat shiny WriteXLS xtable]; }; BED = derive2 { name="BED"; version="1.4.4"; sha256="1hbdjxh695607ppmk39xclh26k1bq9hrysyp8nc5axhhg1drpiff"; depends=[dplyr DT htmltools miniUI neo2R readr rstudioapi shiny stringr visNetwork]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; BEDMatrix = derive2 { name="BEDMatrix"; version="2.0.3"; sha256="1pq333x1shxw3wcqgcb4gqg6rwa0hyc24rib235q4zg10r2gyrbm"; depends=[crochet]; }; BENMMI = derive2 { name="BENMMI"; version="4.3-7"; sha256="1v96g4l1zkpvvx8jdifnafyaz4ml8v1bxbl97r1n5n6mgw88gk77"; depends=[benthos dplyr ggplot2 jsonlite knitr markdown purrr readr tidyr xtable]; }; - BEST = derive2 { name="BEST"; version="0.5.2"; sha256="0mx5j6hxxvs9mc2ss2wyavdylh857833bsci3yi6lljidv9g28zc"; depends=[coda HDInterval rjags]; }; + BEST = derive2 { name="BEST"; version="0.5.3"; sha256="06lcy5mi9vsiyyb27aq5hsjah4g351150qyz5z0pcrx3y6q6qdcj"; depends=[coda HDInterval rjags]; }; BESTree = derive2 { name="BESTree"; version="0.5.2"; sha256="0yij6xdlvhbqifckaylgbhszwwp38d9x6vbpr1nl40mwwnv4bswz"; depends=[plyr]; }; - BET = derive2 { name="BET"; version="0.3.7"; sha256="1ksh6r072370gkjlr8ggwnc1cn4rgwirzccddgp0jkg41fg73f99"; depends=[Rcpp]; }; + BET = derive2 { name="BET"; version="0.4.0"; sha256="1yr45v4s1h61pgghfxfhi3gi5fw67fv6jxs9k70nvhifbvqn7143"; depends=[Rcpp]; }; BETS = derive2 { name="BETS"; version="0.4.9"; sha256="0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; - BFS = derive2 { name="BFS"; version="0.3.0"; sha256="1b9mqiz8frykn8ckmxa4q41fyd5kk8804bpw71xfzjc1ii582fn5"; depends=[dplyr janitor magrittr pins progress purrr pxR rvest tibble tidyRSS xml2]; }; + BFS = derive2 { name="BFS"; version="0.3.1"; sha256="1l131gj16rpms07zwlcgnw93yl0428hz09803z2l9j46375y786h"; depends=[dplyr janitor magrittr pins progress purrr pxR rvest tibble tidyRSS xml2]; }; BFpack = derive2 { name="BFpack"; version="0.3.2"; sha256="04rb48wdab23i20lv7s2a2dafxxyvvl9zxpl17var038v6rd02vs"; depends=[bain extraDistr lme4 MASS Matrix mvtnorm pracma]; }; BGData = derive2 { name="BGData"; version="2.2.0"; sha256="1pn8vwpinn6l6h3lsfpszrp0m2wc3896pi408rjxk8ali0np0182"; depends=[BEDMatrix bigmemory bit crochet ff LinkedMatrix symDMatrix synchronicity]; }; BGGE = derive2 { name="BGGE"; version="0.6.5"; sha256="1h76c40y45xhf2vp9g0q5j9lfwh16q9axbk5c9aqn4md008xr1j2"; depends=[]; }; - BGGM = derive2 { name="BGGM"; version="2.0.3"; sha256="0nybs1x2as01cnpqakls1v63y9c6sj074s5cfkhahaaipig1ivp8"; depends=[BFpack GGally ggplot2 ggridges MASS mvnfast network Rcpp RcppArmadillo RcppDist RcppProgress Rdpack reshape sna]; }; + BGGM = derive2 { name="BGGM"; version="2.0.4"; sha256="0676viahmid0n89jhs93ci8l7rxpam7rn75mdbshgx7f1q3wqiih"; depends=[BFpack GGally ggplot2 ggridges MASS mvnfast network Rcpp RcppArmadillo RcppDist RcppProgress Rdpack reshape sna]; }; BGLR = derive2 { name="BGLR"; version="1.0.8"; sha256="15cv5k44yj5cws9jjd70hvrkm8gzn5x4hfx408n2fbqbv289b5jy"; depends=[truncnorm]; }; - BGPhazard = derive2 { name="BGPhazard"; version="2.1.0"; sha256="0bxqr5anazi4icl6zn01yrs13wimja9q05gqyf1gg3dwfcg0z3vz"; depends=[Brobdingnag dplyr ggplot2 ggthemes gridExtra magrittr progress purrr readr rlang stringr survival tibble tidyr]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; - BGVAR = derive2 { name="BGVAR"; version="2.2.0"; sha256="1fnw52qqcvm1ja4974pjsw178zmn9axcv1p0vn0qj847rd6qkxhm"; depends=[abind bayesm coda GIGrvg knitr MASS Matrix Rcpp RcppArmadillo RcppParallel RcppProgress stochvol xts zoo]; }; + BGVAR = derive2 { name="BGVAR"; version="2.3.1"; sha256="1kjxa4df36szr6nd1bagmx5al39bh4zjb9w8cm2li2j20d2ypjg2"; depends=[abind bayesm coda GIGrvg knitr MASS Matrix Rcpp RcppArmadillo RcppParallel RcppProgress readxl stochvol xts zoo]; }; BGmisc = derive2 { name="BGmisc"; version="0.1"; sha256="15xgm3n3hn5zkrvyfcylyz5q3zah0155914a0rck0ipihb45sbbl"; depends=[Matrix]; }; BH = derive2 { name="BH"; version="1.75.0-0"; sha256="0nkgvl5qjs2a7jv0ncsrl4fqaw2pdaj7a1pncdv6kp874sci0k5f"; depends=[]; }; BHAI = derive2 { name="BHAI"; version="0.99.2"; sha256="1hawa55mk590is8ziav7fdszsa3a42bqb0znzqsazz5lkg4daaa7"; depends=[MCMCpack plotrix prevtoinc]; }; BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.3"; sha256="1cha6bw0zvv30y2hjl1a4d04g1r80dfa7r7zi63q5jjnnbklbswg"; depends=[oro_nifti wavethresh]; }; - BHSBVAR = derive2 { name="BHSBVAR"; version="3.0.0"; sha256="0z3zh57azaambcg3xjfyrmy9nj1bc4w166fni71s727y4h6cdlr1"; depends=[Rcpp RcppArmadillo]; }; + BHSBVAR = derive2 { name="BHSBVAR"; version="3.0.1"; sha256="0k4iklbazw4fbwfd0nhg943ndwrhpxxlbzmfj3c10in84vz2p6v0"; depends=[Rcpp RcppArmadillo]; }; BHTSpack = derive2 { name="BHTSpack"; version="0.6"; sha256="01y3ly83i70lkg2kgbw1r7r1g4k9rk41qyzzscbp8zgc9z63ll8z"; depends=[R2HTML xtable]; }; BI = derive2 { name="BI"; version="1.0.0"; sha256="192qdw2ag8sdw5v7xsc19y2a6w7gs58lnlh0yakc2i0jjad3iyw5"; depends=[]; }; BICORN = derive2 { name="BICORN"; version="0.1.0"; sha256="0mqk8vgp6jdk7f0paa06yqlibkd1y3vs69pg7i9mkvxmda7p4nkq"; depends=[]; }; BIEN = derive2 { name="BIEN"; version="1.2.4"; sha256="1dagrs54ciagm2mgqrvxl6k2akahr0qk63ifxqnks7iljm0x1gw6"; depends=[ape DBI doParallel fasterize foreach raster rgdal rgeos RPostgreSQL sf sp]; }; BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="3.3-12"; sha256="1kphczvj3rxyjvi93cx2j714scvmmpqv5wrg5pdyy8l891jxsr89"; depends=[miceadds Rcpp RcppArmadillo]; }; BIGDAWG = derive2 { name="BIGDAWG"; version="2.3.6"; sha256="1mlk2b293lr2vj0ydh96p9ynbvv67jnkqm9qxz9kcxq65b2i5cv3"; depends=[haplo_stats httr XML]; }; - BIGL = derive2 { name="BIGL"; version="1.6.2"; sha256="144343w7asm9rkkw2dhvfqyvlvb0a83m623bbxkqhlc56y7g4r22"; depends=[ggplot2 MASS minpack_lm nleqslv numDeriv progress rgl robustbase scales]; }; + BIGL = derive2 { name="BIGL"; version="1.6.4"; sha256="1nlmzvygf5bakimjcqcvv6av4kj620nls3994j9zi4xxxs5i5j54"; depends=[ggplot2 MASS minpack_lm nleqslv numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.2.0"; sha256="0x2s82jql429shk70bhjdy9kamz8dz5ymsxj6kp8ga1711bpwyq6"; depends=[pracma]; }; + BINtools = derive2 { name="BINtools"; version="0.1.0"; sha256="061g1790m3gi88kj1avgxdnpdvj6n2mg5dh17c7vx4gx5g5x2q2d"; depends=[BH combinat dplyr mvtnorm Rcpp RcppEigen RcppParallel rstan StanHeaders stringi tibble]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; + BIOMASS = derive2 { name="BIOMASS"; version="2.1.6"; sha256="1iz9vszfg8lxa6yxrz3dj2ihpkcpchdbzdws5y568fczakcv8z5l"; depends=[data_table jsonlite minpack_lm proj4 rappdirs raster sp]; }; BIOdry = derive2 { name="BIOdry"; version="0.8"; sha256="1zga8g50wjnnz2h9b3ak9q67qnl1f14cq6hvdzf9f84pphsnpasa"; depends=[ecodist nlme]; }; - BIRDS = derive2 { name="BIRDS"; version="0.1.27.1"; sha256="1fk26yipk7xwf2dwiypszbijbvqcihj5fgdymxipcvl0jqla4mw8"; depends=[data_table dbscan dplyr geosphere leaflet lubridate magrittr nnet rgdal rgeos rlang sf shotGroups sp stringr taxize tidyr xts zoo]; }; BIS = derive2 { name="BIS"; version="0.2.1"; sha256="0mngmchgc46wc9a7ksyqrvj6k46nm4ih7x69k3xijfia9bgkym0v"; depends=[dplyr readr rvest tidyr xml2]; }; BKPC = derive2 { name="BKPC"; version="1.0.1"; sha256="17gmhf6qq8jn2xzkqvjq60xzy0slz6kgfpd0d6hlpnf30ww7q923"; depends=[kernlab]; }; BLCOP = derive2 { name="BLCOP"; version="0.3.3"; sha256="08y9vmx3cknjvk6ngfwxlfnc03cqpj97i1ijrs1cw5sahjc0vmhc"; depends=[fBasics fMultivar fPortfolio knitr MASS quadprog rmarkdown RUnit timeSeries]; }; @@ -325,10 +333,10 @@ in with self; { BLRShiny = derive2 { name="BLRShiny"; version="0.1.0"; sha256="0z3gr0bvjs7y0jkygh7h9habnk2807cwziajpgfmb7dxdrhccj68"; depends=[caret dplyr e1071 ggplot2 rhandsontable rmarkdown shiny]; }; BLRShiny2 = derive2 { name="BLRShiny2"; version="0.1.0"; sha256="0cl959hlchba4ikzdvxv2jz30sswh5hc0d8hwx8ckzz52kkj4csa"; depends=[caret dplyr e1071 ggplot2 rhandsontable rmarkdown shiny]; }; BLSM = derive2 { name="BLSM"; version="0.1.0"; sha256="02xidwp91rh34rcqd0q552wzm2j80axs1nnwwv2aj04g96lf7myj"; depends=[Rcpp RcppEigen]; }; - BMA = derive2 { name="BMA"; version="3.18.14"; sha256="08ybcbs7vj0hbg0abh2sl3w0fx4ncsr9znlfdbf1fn0w012gvh1v"; depends=[inline leaps robustbase rrcov survival]; }; + BMA = derive2 { name="BMA"; version="3.18.15"; sha256="06ibk6akpjzwpjb77qpb56hzpfhkyrkl153ljlg660rm8cpxbq2b"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.4"; sha256="10241cibzmgrmxzjw7fpw64qkayc1wig5xilahyc182841k4if6w"; depends=[coda]; }; BMRBr = derive2 { name="BMRBr"; version="0.2.0"; sha256="0v2ysap5jfkq9fc5blqlfhsv2bs8rqybmp5z4q3g6y3y7qzhypjw"; depends=[rvest xml2]; }; - BMRSr = derive2 { name="BMRSr"; version="1.0.1"; sha256="0falfkw3gx0c1y52lf82lr6z9l6w7lw8bh04vvl2f1cq02c59nvk"; depends=[httr readr stringr tibble xml2]; }; + BMRSr = derive2 { name="BMRSr"; version="1.0.3"; sha256="0snb8xs22f1khnywkgrs8pj7w6hg2mfppng0q695xyh4ci157wam"; depends=[dplyr httr purrr readr rlang stringr tibble xml2]; }; BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; }; @@ -336,27 +344,29 @@ in with self; { BMTME = derive2 { name="BMTME"; version="1.0.19"; sha256="07iw6aqcwn4a29b85cavfw6hp66csdzlaqwas40zr5ga3kp72j51"; depends=[BGLR doSNOW dplyr foreach matrixcalc mvtnorm progress Rcpp RcppArmadillo snow tidyr]; }; BMisc = derive2 { name="BMisc"; version="1.4.2"; sha256="03bhq5gf4x959sam0mhk3sm9h6q6ylbwqp3399l00k7zhg6n7dw8"; depends=[tidyr]; }; BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; }; - BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; }; BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.3"; sha256="1dnylvag24zqp93acdbn0ilbdzbn250pjjp6hjdd9d1zvla2ck85"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; }; BNPTSclust = derive2 { name="BNPTSclust"; version="2.0"; sha256="1ymvklv6d9684xzwdkvaxdjd1q20xmsf6kkfibn2wphlaqs2rh2n"; depends=[MASS mvtnorm]; }; - BNPdensity = derive2 { name="BNPdensity"; version="2020.3.4"; sha256="0775fcf5y78ibmhl5fljrlvznn1a74s5ihldb6wgixmm4c0xmz3x"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; - BNPmix = derive2 { name="BNPmix"; version="0.2.8"; sha256="1a5bwmj7mk2m1ncg1cp90nq2n4l5xpkwxs19agb6h2d7hk2y20b6"; depends=[coda ggplot2 ggpubr Rcpp RcppArmadillo RcppDist]; }; + BNPdensity = derive2 { name="BNPdensity"; version="2021.5.4"; sha256="16hm81wn08fjdamikzrmhpbsz31phkqxdqhp23w0pbxczk9gll47"; depends=[coda dplyr ggplot2 gridExtra survival tidyr viridis]; }; + BNPmix = derive2 { name="BNPmix"; version="0.2.9"; sha256="11xf1sqyf62wyqhdyvmb6zcb3cl7dr6cjywmvrf1nkrfdjcgf1pk"; depends=[coda ggplot2 ggpubr Rcpp RcppArmadillo RcppDist]; }; BNSL = derive2 { name="BNSL"; version="0.1.4"; sha256="0nrlx55364kgvkdpyaimgjxwnzmmdl1gmvyv3wkm8n2jyki92xxp"; depends=[bnlearn igraph Rcpp]; }; - BNSP = derive2 { name="BNSP"; version="2.1.5"; sha256="0ccabfr5fzh59j3nxwbh8pb74is9vz4is2s8anbrc3nhlhr8s8p3"; depends=[coda corrplot cubature Formula ggplot2 gridExtra label_switching mgcv plot3D plyr threejs]; }; + BNSP = derive2 { name="BNSP"; version="2.1.6"; sha256="0ig531n9sj50wn5nwljc2x4wijv5i28jx73knzz2kshb56p8sl7l"; depends=[coda corrplot cubature Formula ggplot2 gridExtra label_switching mgcv plot3D plyr threejs]; }; BNrich = derive2 { name="BNrich"; version="0.1.1"; sha256="0m3cz7npc7mwq2vj68hllbd2vf5xqw00jaxv1pm3c28mq7pb459j"; depends=[bnlearn corpcor glmnet graph]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; BOIN = derive2 { name="BOIN"; version="2.7.2"; sha256="03h6s1nn87xgkk830wls06mgflg0arq084k74gfp1k4wccwkjr5y"; depends=[Iso]; }; BOJ = derive2 { name="BOJ"; version="0.2.3"; sha256="0wphdsd9v74jyfj3mjc2mm23lwfls3q4kxc3ii0rvvdlma2xm49f"; depends=[dplyr readr rvest tidyr tidyselect xml2]; }; + BOSO = derive2 { name="BOSO"; version="1.0.3"; sha256="0zax40x2d62vcn8zznmzmykk33mv4vbjfl88i3r1djbvalcdf5cf"; depends=[MASS Matrix]; }; BOSSreg = derive2 { name="BOSSreg"; version="0.2.0"; sha256="0ln4nx0jlvz5kqk9qkcl8a2cyhsdcqqfs5112qcaabjiwjnvla7w"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; BPEC = derive2 { name="BPEC"; version="1.3.1"; sha256="0jvq56cq1wnhwd6wvg02hbx4b5vc2hz1lyxi63pl41rk0xva615a"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools sp]; }; BPM = derive2 { name="BPM"; version="1.0.0"; sha256="17k2d1xjfz85ygx0xnh6yqca9nyypd32d7sbna3k33ynsjqay3x8"; depends=[limma]; }; + BPmodel = derive2 { name="BPmodel"; version="1.1.2"; sha256="1fmiz06ci3x4ljaap6famnz82mrf2rcdg4d282x6wghpy4yv4afa"; depends=[Deriv dplyr extraDistr gamlss gamlss_dist ggplot2 pracma]; }; + BRACoD_R = derive2 { name="BRACoD.R"; version="0.0.1.2"; sha256="1p5fvmzkydask47hmz1fnss1sc1hrp1s7h28qn5q6fja0r52kzkz"; depends=[reticulate]; }; BRDT = derive2 { name="BRDT"; version="0.1.0"; sha256="1yv2fh4cc9h35l8cngpxnqa83a7bx79pr7c1gp9h84p1pigg8282"; depends=[]; }; - BRETIGEA = derive2 { name="BRETIGEA"; version="1.0.0"; sha256="176z7ajyfcfljv36d2sa15cvw047rsir3gn0l4lxmcyliw93r4lv"; depends=[]; }; - BRISC = derive2 { name="BRISC"; version="1.0.1"; sha256="0q8qkw718ivg45lgk566fpv8ya3qqlg3k7npxj2325wcha58bl35"; depends=[matrixStats pbapply RANN rdist]; }; + BRETIGEA = derive2 { name="BRETIGEA"; version="1.0.3"; sha256="0q4phggz6smzd294znr1fp0gskpcwdbd6hnvvl3q3z1h7cpf40sn"; depends=[]; }; + BRISC = derive2 { name="BRISC"; version="1.0.2"; sha256="1qkb98wlqyhi378darx62f5ymsr290pqq82msqwcj6ks0xi9mj2s"; depends=[matrixStats pbapply RANN rdist]; }; BRL = derive2 { name="BRL"; version="0.1.0"; sha256="13qi78v3057qn4hfby14sp26hy3ibl50f06x8gpak6gi76g8bhwi"; depends=[]; }; - BRugs = derive2 { name="BRugs"; version="0.9-0"; sha256="0f0v30mvfw97vfwzkjpqzf2894b2yhksja0xhpranprk135srxp0"; depends=[coda]; }; + BRugs = derive2 { name="BRugs"; version="0.9-1"; sha256="1m3dlw6201bzf6fcm4qscpsmgjkpidwiil3m4iwfn0b0iv3dclcv"; depends=[coda]; }; BSBT = derive2 { name="BSBT"; version="1.1.0"; sha256="1a45ivld1j4nmy6v3giwicia0mppdms0xah9qns8m55lz5bbsj0p"; depends=[expm igraph MASS]; }; - BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; }; + BSDA = derive2 { name="BSDA"; version="1.2.1"; sha256="0vcf3h1rkgs0mr6rri2zjkb3c62dmndm281zh4ddz2vyw27wpwg2"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; }; BSPADATA = derive2 { name="BSPADATA"; version="1.0"; sha256="1g709i0icxlxq2ljb2sm5iyc8ljqxadi62xc4mg702fsgl0x5ny9"; depends=[mvtnorm pscl spdep]; }; @@ -366,7 +376,7 @@ in with self; { BSW = derive2 { name="BSW"; version="0.1.1"; sha256="0l6sw8lyk9mxfdw4s72hz6a0b30gi2a2vlcndkgahjlym6i5bz83"; depends=[Matrix matrixStats quadprog]; }; BSagri = derive2 { name="BSagri"; version="0.1-10"; sha256="096l2ilr4x2fbjxchkksxkbiyaf7wwdmzn4xyjx001w873x9dgf6"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; BTLLasso = derive2 { name="BTLLasso"; version="0.1-11"; sha256="1nz90jg74xzcwjxi9ppp7a78bg4976h2cmvlz140ss5403pnfbsk"; depends=[Matrix psychotools Rcpp RcppArmadillo stringr TeachingDemos]; }; - BTM = derive2 { name="BTM"; version="0.3.5"; sha256="1x6bncb7r97z8bdyxnn2frdi9kyawfy6c2041mv9f42zdrfzm6jb"; depends=[Rcpp]; }; + BTM = derive2 { name="BTM"; version="0.3.6"; sha256="0ab0wr8nbwn1w1j9hpwfz52lm1sw0qk93713y9k0hpm3pw9dq4jr"; depends=[Rcpp]; }; BTSPAS = derive2 { name="BTSPAS"; version="2021.1.1"; sha256="1clppkr1bflqp1kvy8k7vnr1bjaqy135k7zn5mxfrnkh5hhcj7zm"; depends=[actuar coda data_table ggforce ggplot2 gridExtra plyr R2jags reshape2 scales]; }; BTYD = derive2 { name="BTYD"; version="2.4.2"; sha256="0yccq603vxjzhssb59icmps4iz0sn52wirwajx7995rz0zkfgfvh"; depends=[dplyr hypergeo Matrix optimx]; }; BTYDplus = derive2 { name="BTYDplus"; version="1.2.0"; sha256="1shai7kij20g3isd6l29i696pkzymr0qq2i9gzfsxmvdb4g4pcm2"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; @@ -375,23 +385,22 @@ in with self; { BVAR = derive2 { name="BVAR"; version="1.0.1"; sha256="0nfq5ffa600hx3cbr85jbwawdfczrnr1dvg80qqz74v6lh3k8j7x"; depends=[mvtnorm]; }; BVARverse = derive2 { name="BVARverse"; version="0.0.1"; sha256="00nghvd5bavmn5hw89pcz20x5kbpxr707r5yvvsakn77rdis37ig"; depends=[BVAR generics ggplot2 rlang tidyr]; }; BVSNLP = derive2 { name="BVSNLP"; version="1.1.9"; sha256="1k2sr9wq0q7lq2hmgp75hzxy6v688lw5npwvpma88975yqi6ghiw"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; - BWGS = derive2 { name="BWGS"; version="0.1.0"; sha256="10cqwc9lx5m2s3qay1223whah3jj9fcmyqsw3x8schi9wvrfx8v8"; depends=[BGLR brnn e1071 glmnet randomForest rrBLUP]; }; + BWGS = derive2 { name="BWGS"; version="0.2.1"; sha256="1473lvkmpf2dsgnccwl5a8wp9yvddciqdql4naba4lwghimxy39w"; depends=[BGLR brnn e1071 glmnet randomForest rrBLUP stringi]; }; BWStest = derive2 { name="BWStest"; version="0.2.2"; sha256="02amzlfprmw5pyis0dg0kg0x8xqh50a4vfdcxxmklrzik3b1vzzs"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; BaM = derive2 { name="BaM"; version="1.0.2"; sha256="017x6i8glbbx8aqglyglv9pvcss4vg6l6rnwzaa4vbln95y4582d"; depends=[dlm MASS mice]; }; BaPreStoPro = derive2 { name="BaPreStoPro"; version="0.1"; sha256="0zyyyrr5h8dhjsmgaii8jmb8ignvixpc9nzbfishw9yymjswvm57"; depends=[]; }; BaSTA = derive2 { name="BaSTA"; version="1.9.4"; sha256="1j092gsdip7rpw0g74ha0kjsrqpp5swi7wd4sxlmx6zarcqnxlal"; depends=[snowfall]; }; - BaTFLED3D = derive2 { name="BaTFLED3D"; version="0.2.11"; sha256="0gab9iz1ra72hw8j31n97ysyr3cclhgvdxriyjk8wwv2nrmbw12h"; depends=[foreach iterators R6 RColorBrewer rTensor]; }; BacArena = derive2 { name="BacArena"; version="1.8.2"; sha256="1fv3hmr8frqgdl22cvp5w5089ppmqzw42llw2ls054dvsdadlqm9"; depends=[deSolve ggplot2 glpkAPI igraph Matrix plyr R_matlab Rcpp RcppArmadillo RcppEigen ReacTran reshape2 stringr sybil]; }; BalanceCheck = derive2 { name="BalanceCheck"; version="0.2"; sha256="0aal641vfbjk3w6ipwbqqmm9nnxs962hjmpph9wnqaqk5r6s7brs"; depends=[ade4 mvtnorm]; }; BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.5"; sha256="01ayvjfs83dbnk0m9xb7y9rnxxpfpb6w4qjdffd6hdhcn2s5f73d"; depends=[Rcpp SamplingBigData]; }; - Ball = derive2 { name="Ball"; version="1.3.11"; sha256="0hblv7vs23dhypvvilb77iir7flxmis1azhpkaxf8hmzhs3q3hnf"; depends=[gam mvtnorm survival]; }; + Ball = derive2 { name="Ball"; version="1.3.12"; sha256="103lm9mlrqlqqn40bj4bsw0g9in5vka6q4kpqqzw6y3pbgd6596p"; depends=[gam mvtnorm survival]; }; BallMapper = derive2 { name="BallMapper"; version="0.2.0"; sha256="1hf94d41cks8mbrb985mpd0nqgirvm096cfv7bsy0182bbxlk6s1"; depends=[fields igraph networkD3 scales stringr testthat]; }; BarBorGradient = derive2 { name="BarBorGradient"; version="1.0.5"; sha256="0g2g7hrm23as1xbj79g48r8sj3gsj66fmi895jqlqfbqrl2fl7a5"; depends=[]; }; BarcodingR = derive2 { name="BarcodingR"; version="1.0-3"; sha256="03x26mrlvg00rnfh74wacpgbdk7xr2lq4yd0bx4q2442nli54rdv"; depends=[ape class nnet sp]; }; Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.3.1"; sha256="0yhc0wwjqms569gnm8z2l9hgcbw8lyy437ynkij47pa4c1a1qvjy"; depends=[Rcpp RcppArmadillo]; }; - BaseSet = derive2 { name="BaseSet"; version="0.0.16"; sha256="17czmfp5v0n3lnh9xacs58vsgq63j3kp365xcci5fvayjh1fpxks"; depends=[dplyr magrittr rlang]; }; + BaseSet = derive2 { name="BaseSet"; version="0.0.17"; sha256="1v5f8ixcnqngrhsfrydl7y48gmvmb5srs4xygydv4g4vpmd8gh0c"; depends=[dplyr magrittr rlang]; }; BasketballAnalyzeR = derive2 { name="BasketballAnalyzeR"; version="0.5.0"; sha256="1bad287llg89smqg43lgz2hdkjg3l39mh4k82avgb52xwqp5gjxc"; depends=[circlize corrplot dendextend directlabels dplyr GGally ggnetwork ggplot2 ggplotify ggrepel gridExtra hexbin magrittr MASS network operators PBSmapping plyr readr rlang scales sna sp statnet_common stringr tidyr]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.6.1"; sha256="0jm4bswczmha7p8xb78n4q3wxyjxmi7ya5zrfm0gb31g7r275wba"; depends=[crayon curl dplyr furrr future lubridate purrr quantmod rvest scales stringr tibble tidyr XML zoo]; }; @@ -421,50 +430,53 @@ in with self; { BayesLogit = derive2 { name="BayesLogit"; version="2.1"; sha256="0w3bzk39sxdskwikcz5i0xwfsll4sqgkpr8vw8jvzlcy6dl3yhis"; depends=[]; }; BayesMFSurv = derive2 { name="BayesMFSurv"; version="0.1.0"; sha256="1yxxzwjh1fgfh7qkzf9dfm3x0vbgb0v4p6bf6b5w14kvm06rzhkg"; depends=[coda FastGP MCMCpack mvtnorm Rcpp RcppArmadillo]; }; BayesMRA = derive2 { name="BayesMRA"; version="1.0.0"; sha256="005pygpa8bmr153naxnag7kn876lqwq34d8pzbj954nivlxl4zaw"; depends=[fields igraph Matrix mvnfast Rcpp RcppArmadillo spam]; }; - BayesMallows = derive2 { name="BayesMallows"; version="1.0.1"; sha256="1j1h4zsgr3dqc26a40398hf9hcbj2cm3cgp9dahk7yzgyyi6xskd"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows PLMIX purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; + BayesMallows = derive2 { name="BayesMallows"; version="1.0.2"; sha256="1zjhg7fcy1hm7krii3flcaswiq2ixm1rk76qxcc13bj9nlmxi390"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows PLMIX purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; BayesMassBal = derive2 { name="BayesMassBal"; version="1.0.0"; sha256="158vwfp5wn9g28fg48zmd95lfsr6flmcdm4igfw4cmgp4w0w69lq"; depends=[coda HDInterval LaplacesDemon Matrix pracma Rdpack tmvtnorm]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; BayesNSGP = derive2 { name="BayesNSGP"; version="0.1.1"; sha256="11c83iafhl8yasyy8xwk9wladbj986xpmgc8d3yd9dxkic71flw8"; depends=[FNN Matrix nimble StatMatch]; }; - BayesNetBP = derive2 { name="BayesNetBP"; version="1.5.5"; sha256="0vs8m62arvsc1rp7znr8j1wvljm2r4wcgzk6ry6iy6x6xmwa0z84"; depends=[bnlearn doBy fields graph igraph qtl qtlnet RColorBrewer]; }; + BayesNetBP = derive2 { name="BayesNetBP"; version="1.5.9"; sha256="05khqmsr7p9x6s4h7ffkh1sa2aqj42f00z6xkxwm0xlxa6ji6v4s"; depends=[bnlearn doBy fields graph igraph RColorBrewer]; }; + BayesOrdDesign = derive2 { name="BayesOrdDesign"; version="0.1.0"; sha256="19fgx66r0hxm4ybjj9pw0xy4a6bw1rgfl0kjz6xwdyh9y9m3c8c6"; depends=[coda fda ggplot2 gsDesign madness ordinal R2jags rjags rjmcmc schoolmath superdiag tidyverse]; }; + BayesPPD = derive2 { name="BayesPPD"; version="1.0.3"; sha256="1w5jyvwwc7vk0wx41waq2ab92wb367d25hab55r2cs44vgcw04rl"; depends=[Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; BayesPostEst = derive2 { name="BayesPostEst"; version="0.3.1"; sha256="0pfildzmqdwnj6h2k692ym9i37lwc65jqgjcx6h3cz8spcmzxm8y"; depends=[carData caTools coda dplyr ggplot2 ggridges HDInterval reshape2 rlang ROCR texreg tidyr]; }; BayesProject = derive2 { name="BayesProject"; version="1.0"; sha256="0b1xqw7f9kfbmr8m6fl9d2fpwr364s4a5vdw57l6i5rm6lszyfh5"; depends=[Rcpp RcppEigen Rdpack]; }; + BayesRGMM = derive2 { name="BayesRGMM"; version="1.1"; sha256="1clm01vp0irng082ifag9pnb6g8avxdskzy0jdy4c0n57hliwg6i"; depends=[abind batchmeans MASS msm mvtnorm plyr Rcpp RcppArmadillo RcppDist Rdpack reshape]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; BayesReversePLLH = derive2 { name="BayesReversePLLH"; version="1.4"; sha256="1wigp9692z0vf1vm3cpbl6wcgp3zyqzfbrkd344hi88421kj1yxj"; depends=[Rcpp RcppArmadillo]; }; BayesS5 = derive2 { name="BayesS5"; version="1.41"; sha256="0vs6s50h4gpxda9lbxfgn76k9kp81l62a6bv22r7ixsjlnd4baql"; depends=[abind Matrix snowfall splines2]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-2"; sha256="1xbx9hr254agpcqs1fl7qi7h19fd2bbmjszn44l566n2svgvxwf5"; depends=[coda Formula lattice]; }; - BayesSPsurv = derive2 { name="BayesSPsurv"; version="0.1.2"; sha256="0389hs737yx7np4b7z4yzffs8ysl3y7s6r1aj91yyji63kda3hd5"; depends=[ape coda dplyr FastGP ggplot2 MCMCpack Rcpp RcppArmadillo reshape2]; }; - BayesSUR = derive2 { name="BayesSUR"; version="1.2-4"; sha256="0qwqydmikf3ja4z3mwf6r1a6wxqnvkmx2747g38nzhcj53ipgsw0"; depends=[igraph Matrix Rcpp RcppArmadillo tikzDevice xml2]; }; + BayesSPsurv = derive2 { name="BayesSPsurv"; version="0.1.4"; sha256="0j3cjd3xwljmd452c9w83f2cvhjkrc7jvhwzkwdp5i60cw0qqhja"; depends=[ape coda countrycode dplyr FastGP ggplot2 MCMCpack progress Rcpp RcppArmadillo reshape2 rworldmap]; }; + BayesSUR = derive2 { name="BayesSUR"; version="2.0-0"; sha256="0mxjp9k0a1nmlrkbl01vrxjrb52xzcvmpippkc23zh2616czrrfc"; depends=[igraph Matrix Rcpp RcppArmadillo tikzDevice xml2]; }; BayesSampling = derive2 { name="BayesSampling"; version="1.1.0"; sha256="1nwwf195b7hly7kjfikizyvgc975g74z6hsm89c1ibfgxlj51bcw"; depends=[MASS Matrix matrixcalc]; }; - BayesSenMC = derive2 { name="BayesSenMC"; version="0.1.2"; sha256="0vzvc7xmr39mlhqx0cmqrw2bszmxfbzbyy2l3ssbw2cz0c4xarkj"; depends=[dplyr ggplot2 lme4 Rcpp rstan]; }; BayesSpec = derive2 { name="BayesSpec"; version="0.5.3"; sha256="17gchdijcjhbr2y4glbq9szjh4qmgivzh6p4fllh589da18nzjcr"; depends=[mvtnorm pscl trust]; }; + BayesSummaryStatLM = derive2 { name="BayesSummaryStatLM"; version="2.0"; sha256="1b4h6s3cb8904slyy2pq3dzy3941p87s32zacmpwrnp7yvwxzl3d"; depends=[bit ff mvnfast]; }; BayesSurvival = derive2 { name="BayesSurvival"; version="0.2.0"; sha256="1kpp0dfcmk86grg13b817py49v071q6p0dh8z22g6x2i8zl1vdfi"; depends=[ggplot2 survival]; }; + BayesTools = derive2 { name="BayesTools"; version="0.1.1"; sha256="045fj240r3zl0adwcqsfm1kwjsywbg6m8pzi6g7c0bxn1djp79ql"; depends=[bridgesampling coda extraDistr ggplot2 runjags]; }; BayesTree = derive2 { name="BayesTree"; version="0.3-1.4"; sha256="0saca1ln582szqzc2c78z24b1lszzhc9hvsin73kb7r2dlg5ciii"; depends=[nnet]; }; BayesTreePrior = derive2 { name="BayesTreePrior"; version="1.0.1"; sha256="13igmvw1wj8kzfijzsrhdqr52kv4vqrm91i71ay6f7jnkry3spaw"; depends=[]; }; BayesTwin = derive2 { name="BayesTwin"; version="1.0"; sha256="026blnhihbx9bpd63mxhbp0kpvj0lwbj7mg72alyfr2jnrh1n3lp"; depends=[coda foreign matrixStats rjags]; }; BayesValidate = derive2 { name="BayesValidate"; version="0.0"; sha256="1gli65avpkb90asx92l1yjbwaxcsyb920idyjwgd2sl2b3l657ly"; depends=[]; }; BayesVarSel = derive2 { name="BayesVarSel"; version="2.0.1"; sha256="1107amhj3bclc434qizffjfmsa2w36qkp6gq7vgl0hwv0ncc0vyn"; depends=[MASS mvtnorm]; }; BayesX = derive2 { name="BayesX"; version="0.3-1"; sha256="0g4cdkvicqzg75qgr62j89dc9mni38ai7705j6jbfx59vn6dbrr5"; depends=[coda colorspace maptools shapefiles sp]; }; - BayesXsrc = derive2 { name="BayesXsrc"; version="3.0-1"; sha256="0l8c6xsyqj09m722hdanr1d9n6a1ps77ybm1jaqmp86bqmq1br03"; depends=[]; }; BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; BayesianFROC = derive2 { name="BayesianFROC"; version="0.4.0"; sha256="1rq75kz2s4gphmiqr9jwv2jdjkia64bxa95sglb0h55wlsrww1fh"; depends=[bridgesampling car crayon ggplot2 knitr pracma Rcpp readxl rhandsontable rstan shiny shinydashboard shinythemes xlsx]; }; BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; }; - BayesianLaterality = derive2 { name="BayesianLaterality"; version="0.1.0"; sha256="1wrpgha9xfc9w2vf8z2fqagkrh8iyp2xgm92y2pwn3dmmbqza8d2"; depends=[dplyr purrr Rdpack rlang tidyr tmvtnorm]; }; + BayesianLaterality = derive2 { name="BayesianLaterality"; version="0.1.1"; sha256="1b8ndwnwsj2wzbjp3rivdsx5nsfg2rgv6mnlyp7jxaksxvf4ray7"; depends=[dplyr purrr Rdpack rlang tidyr tmvtnorm]; }; BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.5"; sha256="0vnnxzxz68dkfwr9wif8lam3a4khgbslbf49xkygqm8n1swysx2x"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard shinytest shinyWidgets testthat]; }; BayesianPower = derive2 { name="BayesianPower"; version="0.2.3"; sha256="00rn3wmqrhk2pssbq5j2prl8m6cgfarr49672pnksp2dcbi47p20"; depends=[]; }; - BayesianReasoning = derive2 { name="BayesianReasoning"; version="0.3.2"; sha256="1d9s47bkx5m6dsdq4hbflm7x1lax4n9gk3wbvilpybp6gn3bhlm9"; depends=[dplyr ggforce ggplot2 magrittr reshape2 tibble tidyr]; }; + BayesianReasoning = derive2 { name="BayesianReasoning"; version="0.3.3"; sha256="1rhhdw27nh24rsgbmbmg40ja29gz3ih375lyddmk0dd3f3ph4ldx"; depends=[dplyr ggforce ggplot2 magrittr reshape2 tibble tidyr]; }; BayesianTools = derive2 { name="BayesianTools"; version="0.1.7"; sha256="0330bbnny35h4gsmwg31p3n3i511wrckzmp174ydm55pvsdkhjdg"; depends=[bridgesampling coda DHARMa ellipse emulator gap IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; Bayesiangammareg = derive2 { name="Bayesiangammareg"; version="0.1.0"; sha256="0b0fqmig7vgmlrq2884q0apfd89nn5k4dj8rqjizkkbw4qpzmylb"; depends=[mvtnorm]; }; - Bayesrel = derive2 { name="Bayesrel"; version="0.7.0.7"; sha256="1v1cg1b0hh28n6c8grs33vcflf7bmx72afky994brdv23sr5javv"; depends=[coda LaplacesDemon lavaan MASS Rcpp RcppArmadillo Rdpack]; }; + Bayesrel = derive2 { name="Bayesrel"; version="0.7.1"; sha256="080wxv9ik1ph7h74xfsa57dsddsvlvag0iybgrdajkn0svc5qb9m"; depends=[coda LaplacesDemon lavaan MASS Rcpp RcppArmadillo Rdpack]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; - Bchron = derive2 { name="Bchron"; version="4.7.4"; sha256="0wpjswg90l8i3ssg9kji0nxy0wqr9lly3hq4cmgicjc4l51blrjm"; depends=[coda dplyr ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr]; }; + Bchron = derive2 { name="Bchron"; version="4.7.6"; sha256="1s8bx9a5rpcrw0msnjf565crz3d2fykvy5fj1chbqxzjh7qm865w"; depends=[checkmate coda dplyr ggforce ggplot2 ggridges magrittr MASS mclust purrr scales stringr]; }; BeSS = derive2 { name="BeSS"; version="2.0.3"; sha256="09zxpzcaj13fn38cwd0xk0254aphb3jn1wdwn9hiq9vapfsgn0dx"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; BeastJar = derive2 { name="BeastJar"; version="1.10.6"; sha256="0581q9m7lb681d12vld231vn6wqv5s2sqkvav4fd0xllvjighlx7"; depends=[rJava]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.29"; sha256="06zphnpnxvp6frl2gkmrsfils8xi64b4m8gvs483k8l0z4bjrfbk"; depends=[lpSolveAPI quadprog Rcpp ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; - Bergm = derive2 { name="Bergm"; version="5.0.2"; sha256="03v90hh30ydpf9i60f6fraxrlr8i3zjxq3pg1yd56122kb93aa5y"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network statnet_common]; }; + Bergm = derive2 { name="Bergm"; version="5.0.3"; sha256="0wi8l2xwfiw8slg37z2milck6js26iy0yaj7m6sxgfh16j3n2gwx"; depends=[coda ergm Matrix matrixcalc MCMCpack mvtnorm network statnet_common]; }; Bessel = derive2 { name="Bessel"; version="0.6-0"; sha256="0iwm08nhlivi4zwcqdi296a1l4n4lfanfxhaysh9vcsyk1kpiacf"; depends=[Rmpfr]; }; Bestie = derive2 { name="Bestie"; version="0.1.2"; sha256="0fyr0lcdqrsfj821dpbg2nqq6v9kw5xpyggx8p9dwn8bz04l7bza"; depends=[BiDAG Rcpp]; }; BetaBit = derive2 { name="BetaBit"; version="1.4"; sha256="11cvl9m20ycc0zsxbdapjflgsiaxx4dzaygjhv948adjfi5fycbn"; depends=[digest]; }; @@ -473,14 +485,15 @@ in with self; { BeyondBenford = derive2 { name="BeyondBenford"; version="1.4"; sha256="04jdx35955g44v2is6zxfw1gip7zh3li8divc7iy5hl0jrshfhv3"; depends=[ggplot2]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; BiBitR = derive2 { name="BiBitR"; version="0.3.1"; sha256="0wfwph6nw12hb43j14i9ycj8m2zn0m5ynp7afq9cray8rbgvxfv6"; depends=[biclust cluster dendextend foreign lattice randomcoloR viridis]; }; - BiDAG = derive2 { name="BiDAG"; version="2.0.2"; sha256="1sp8rzmpb6bi2zbpclxlyqgcj6na3ms8pkssrd8yx04cj9q74760"; depends=[graph pcalg Rcpp Rgraphviz]; }; + BiDAG = derive2 { name="BiDAG"; version="2.0.3"; sha256="1ii13yklswp5wdmcqr42fxy87i1fn81vbyijd7hr7mnmnmkdhsy2"; depends=[graph pcalg RBGL Rcpp Rgraphviz]; }; BiDimRegression = derive2 { name="BiDimRegression"; version="2.0.0"; sha256="0k0708z6xn04zjkc4sk15649wji6hl5q4rvd28sz5kbq7z54j1j5"; depends=[Formula]; }; BiProbitPartial = derive2 { name="BiProbitPartial"; version="1.0.3"; sha256="0y19b8bkwr7rpygmj03013slmfbyd7aj6714hm14w5rdbnckymw3"; depends=[coda Formula mvtnorm numDeriv optimr pbivnorm Rcpp RcppArmadillo RcppTN]; }; BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; BiTrinA = derive2 { name="BiTrinA"; version="1.3"; sha256="0sjq5a21vpsjs0ad0v8gsqlbk3n8virg1hzj0nvgm3h3xqhymh1d"; depends=[diptest]; }; - BiasCorrector = derive2 { name="BiasCorrector"; version="0.1.4"; sha256="0c5hq2xdw25hvynarc7qlpdbjg5c5avczifnc9q9wp0ql6dr91y6"; depends=[data_table DT magrittr rBiasCorrection shiny shinydashboard shinyjs]; }; + BiasCorrector = derive2 { name="BiasCorrector"; version="0.2.0"; sha256="1kkadpwcbd1x5vgfrhwf1560fc4b624wiq8ciciakb8l5hyw53bq"; depends=[data_table DT magrittr rBiasCorrection shiny shinydashboard shinyjs]; }; BiasedUrn = derive2 { name="BiasedUrn"; version="1.07"; sha256="13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"; depends=[]; }; - BibPlots = derive2 { name="BibPlots"; version="0.0.6"; sha256="0gbywbxhqw226mzhxlkl98yky206f9m81wcrp6r4wj8wqhzc2fay"; depends=[]; }; + BibPlots = derive2 { name="BibPlots"; version="0.0.7"; sha256="0qh9bqzhy6gy0fw3gy04nja6hjcysrrnjs92vgxqjjj5wb1j0ny9"; depends=[]; }; + BifactorIndicesCalculator = derive2 { name="BifactorIndicesCalculator"; version="0.2.2"; sha256="1vnwksw0j4lc2knlcmm5748pf4d7r44sn34s1mrv9p50hlnkk85p"; depends=[lavaan mirt mnormt MplusAutomation tidyr]; }; BigQuic = derive2 { name="BigQuic"; version="1.1-9.1"; sha256="0b1vi06zakxcw045h6dnx6sy1fxzsmh69zh0m34vwr0rd18rrj5j"; depends=[Matrix Rcpp scalreg]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; BigVAR = derive2 { name="BigVAR"; version="1.0.6"; sha256="03d5a61clkngq67mkf2pyjj3k633kxp7g37myfplbxi55bdfmdlz"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; @@ -499,15 +512,15 @@ in with self; { BinarybalancedCut = derive2 { name="BinarybalancedCut"; version="0.2"; sha256="1rs7x7ggqzaz9r2912g0fi9x7przd8gjy6pianx457w5f39fqx4v"; depends=[ggplot2 reshape2]; }; BioCircos = derive2 { name="BioCircos"; version="0.3.4"; sha256="1gl57r47p5z1wzs94xzc26j2r8z5hpqr4163b01x6jwzvbrlfwhz"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; }; - BioInsight = derive2 { name="BioInsight"; version="0.2.0"; sha256="1k64k3vv88i0x38h3lwjjiq9zzq64kw2vcxa3wr4g7l2m5hdiyk1"; depends=[edgeR knitr limma RColorBrewer wordcloud]; }; + BioInsight = derive2 { name="BioInsight"; version="0.3.1"; sha256="129w9643l01y316hm0qcsmxzh5lsdmq6xmiz4rhmdh0dcnw2s93n"; depends=[edgeR knitr limma RColorBrewer wordcloud]; }; BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; }; BioMedR = derive2 { name="BioMedR"; version="1.2.1"; sha256="0l3nmnqv0gzkbby4fhajbba910zpnbyckvxwds353pn54g9pcry7"; depends=[Biostrings ChemmineR fmcsR GOSemSim MASS org_Hs_eg_db pls randomForest rcdk RCurl rjson]; }; BioPET = derive2 { name="BioPET"; version="0.2.2"; sha256="0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioPETsurv = derive2 { name="BioPETsurv"; version="0.1.0"; sha256="0svwf8pzvlmlp8aacf70hzlg2h81m6lyhh4p73ixqw5v9bnyq6m0"; depends=[ggplot2 gridExtra survival]; }; BioProbability = derive2 { name="BioProbability"; version="1.0"; sha256="051m761zf079s0p4q0ambwqc22qjz2yajxrsmnjnxvqiaadaj1q7"; depends=[]; }; BioStatR = derive2 { name="BioStatR"; version="3.1.2"; sha256="1fs5hzsb770ygcysmwl8dyfkrq3nwhsfw4jd73gbdw3x8dqxc6c4"; depends=[ggplot2]; }; - BioVenn = derive2 { name="BioVenn"; version="1.1.2"; sha256="1z3w53v3s9lc4n1p2z6c5vyd0h1817q7wiz7xhzj2sm2z4n17nbl"; depends=[biomaRt plotrix svglite]; }; - BiocManager = derive2 { name="BiocManager"; version="1.30.12"; sha256="0c2anza01pc36manj3cvycbq8p57qpq18dsimk3y3gpks70hhqf3"; depends=[]; }; + BioVenn = derive2 { name="BioVenn"; version="1.1.3"; sha256="0nwqfb65vhr2246w17nv27v186gzl5n3jxnqx7r9rq525qvyx0rg"; depends=[biomaRt plotrix svglite]; }; + BiocManager = derive2 { name="BiocManager"; version="1.30.16"; sha256="0m9qxwqajg8lp0z06blbpgk3zw0z73aly1cvmjk6mvwja6jm99vm"; depends=[]; }; Biocomb = derive2 { name="Biocomb"; version="0.4"; sha256="0jqfac81r5731m0i9jq7v5ns9263p8r7i03jyz10y915kfr6ikh6"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; Biodem = derive2 { name="Biodem"; version="0.5"; sha256="1phnq6zq96i6z7jj196png3spjpbbx5p2s8iya0vvbfik12ivzkc"; depends=[]; }; BiodiversityR = derive2 { name="BiodiversityR"; version="2.13-1"; sha256="0x9z9v79mxzqsvi6v93ffm440fkbfqb1x6wd8csy6zwrg5xyj8cb"; depends=[Rcmdr vegan]; }; @@ -515,12 +528,12 @@ in with self; { Biolinv = derive2 { name="Biolinv"; version="0.1-3"; sha256="1c081rhbgl6n76p2knaiyvjx0l02slix92vgfl2spss5cb9qzkln"; depends=[classInt fields raster sp spatstat spatstat_core spatstat_geom]; }; Biopeak = derive2 { name="Biopeak"; version="1.0"; sha256="1l08m1jl8yygbdfzk8klpj1q2m7icvxi98vmk7akxs0sswjc6wd2"; depends=[cluster dbscan factoextra gplots RColorBrewer]; }; Bios2cor = derive2 { name="Bios2cor"; version="2.2"; sha256="1wkj9vr33m9jilidil9jpw5rzr3pf7gkimxdvch22ks4bgkx7l1w"; depends=[bigmemory bio3d circular igraph]; }; - Biostatistics = derive2 { name="Biostatistics"; version="1.0.1"; sha256="1kixhwbnl9y94zas7zfzilkgryn4b3w59cvkf1zy7v68lfjfwvvs"; depends=[learnr]; }; - Biotech = derive2 { name="Biotech"; version="1.0.0"; sha256="01ddpxlgav8jjns0r23yjjynv80gwqcfalnz8gr553lm0wffdvj5"; depends=[dr4pl ggplot2 magrittr tidyverse]; }; + Biostatistics = derive2 { name="Biostatistics"; version="1.0.3"; sha256="1005i99gaj2qj1qgpxz1i4yhd9h5y1dixvh70pr1a2igqf88cziv"; depends=[learnr]; }; + BiplotML = derive2 { name="BiplotML"; version="1.0.1"; sha256="08n5cxylzj9d3x2b9pbs14viw63wn1k7kdgayp017v6mj9s09wpl"; depends=[optimr optimx shapes]; }; BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; - BisqueRNA = derive2 { name="BisqueRNA"; version="1.0.4"; sha256="01g34n87ml7n3pck77497ddgbv3rr5p4153ac8ninpgjijlm3jw2"; depends=[Biobase limSolve]; }; + BisqueRNA = derive2 { name="BisqueRNA"; version="1.0.5"; sha256="0p3p5lp69gri7vs6qfpm7br4ksbs4l7clm4nj8ki99wpqiqni23n"; depends=[Biobase limSolve]; }; BivGeo = derive2 { name="BivGeo"; version="2.0.1"; sha256="1sj52v1zmk425jw9acq9y0jdp3agx103yzf1bjbc5vrmk1x0i0qr"; depends=[]; }; - BivRec = derive2 { name="BivRec"; version="1.2.0"; sha256="1q68qs2xm3qry7wc5ilrgjpyygfbcvvqy61yg98h5px302d1ixk3"; depends=[dplyr MASS Rcpp stringr survival]; }; + BivRec = derive2 { name="BivRec"; version="1.2.1"; sha256="0qqjp9m360db3vz15zpbpqbm8v112n9mchcvsc3iiv60ayfimbg4"; depends=[dplyr MASS Rcpp stringr survival]; }; BivRegBLS = derive2 { name="BivRegBLS"; version="1.1.1"; sha256="1kpl0pwm2g40pxrfbz2d95vcrm51flg6bgc83661349cmc9a2511"; depends=[ellipse]; }; BivUnifBin = derive2 { name="BivUnifBin"; version="1.3.3"; sha256="0l5s07mvip1k667rvdpkh3k6xkzns8cy50bcs2xlmxd9xp7c6j2w"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; @@ -528,7 +541,7 @@ in with self; { BlackCarbon = derive2 { name="BlackCarbon"; version="0.1.0"; sha256="19ll2lcdxj5bmgh4wyk47ddxpwrqdiy67wsvj7mi1vm7y5ccyfhn"; depends=[]; }; BlakerCI = derive2 { name="BlakerCI"; version="1.0-6"; sha256="0dcmnaf0k195caajy8h4qymyfj45cjwmkcgsbwv0z7x3h9sx5k6v"; depends=[]; }; BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; }; - Blaunet = derive2 { name="Blaunet"; version="2.1.0"; sha256="0rbqbi57f4qkdd8b2zbw1i8afb6355ba4yv0zg6f410qqgxiq0c4"; depends=[cairoDevice ergm foreign haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; + BlanketStatsments = derive2 { name="BlanketStatsments"; version="0.1.2"; sha256="00zh3ivqrzlz6wz0nalmdqp8pfki3kkxm9idh2ri6sfxsb6kfdp6"; depends=[assertive_types basecamb DescTools Hmisc survAUC survival]; }; Blendstat = derive2 { name="Blendstat"; version="1.0.3"; sha256="0d5zzqiav7b5prh8332kwqy6ga96lkbkdjis8qwifa11j5qa087a"; depends=[lattice MASS]; }; BlockCov = derive2 { name="BlockCov"; version="0.1.1"; sha256="1ilqd8kvhlq0nc1n4y7g0aiwran3kyqs8i143j6dv2wy3myn5x0l"; depends=[BBmisc dplyr magrittr Matrix Rdpack rlang tibble]; }; BlockFeST = derive2 { name="BlockFeST"; version="2.0"; sha256="1fcl3yc1cf09znqbj787d3fd2kl5rp63la7pxawsgmap7nxwkp65"; depends=[BASIX]; }; @@ -549,9 +562,10 @@ in with self; { BoostMLR = derive2 { name="BoostMLR"; version="1.0.3"; sha256="0gk8jf04qda1qsc6987d8nfa453v9cqkjsvvrrg68yx3fd96m8aj"; depends=[nlme Rcpp RcppArmadillo]; }; BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; - BootstrapQTL = derive2 { name="BootstrapQTL"; version="1.0.2"; sha256="1qf93wmrh6znm81jr3gyn1sl8x4i6pdx811r70fg8k026fbfjn3a"; depends=[data_table foreach MatrixEQTL]; }; + BootstrapQTL = derive2 { name="BootstrapQTL"; version="1.0.5"; sha256="04lyr9x6lz4q5y70p92ffdil2i9f1fsykw5wh6wsv0qcqypdmawy"; depends=[data_table foreach MatrixEQTL]; }; Boptbd = derive2 { name="Boptbd"; version="1.0.5"; sha256="1p786avc37yq5g01zh6sqx7b1rvbxrh6gbxsad4bdvr12cjdsss6"; depends=[igraph MASS Matrix]; }; Boruta = derive2 { name="Boruta"; version="7.0.0"; sha256="0y2w4wb45kfnzrxcrdsiwgal9fsnlr3wad1sqdc70qv8gp921xbg"; depends=[ranger]; }; + BosonSampling = derive2 { name="BosonSampling"; version="0.1.3"; sha256="0dxvjdvzv2b3763x4wrkw02q57l42286w9bg2xhcngmcpdhnkg51"; depends=[Rcpp RcppArmadillo]; }; BoutrosLab_plotting_general = derive2 { name="BoutrosLab.plotting.general"; version="6.0.3"; sha256="0sirpdp7k28wwn5k5wyc0ib6abb5b1qpjrrk3m168x5yg1s2hqkf"; depends=[cluster e1071 gridExtra gtable hexbin lattice latticeExtra MASS]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-2"; sha256="0vss3ib74cz2zn1afmrvllawghj9z2ay4x1ysvk4rqvjmiia4a2i"; depends=[brglm gtools lme4 qvcalc]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; @@ -563,29 +577,32 @@ in with self; { Brundle = derive2 { name="Brundle"; version="1.0.9"; sha256="0z17wgmi272738n8pn6r60v5gbg8cbmwhc94s8f3vipa44h690bc"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; BsMD = derive2 { name="BsMD"; version="2020.4.30"; sha256="1842a4hq7pa3bxw18hnw8fva0x3jzi27rkrib92idsc92n0r44n2"; depends=[]; }; Buddle = derive2 { name="Buddle"; version="2.0.1"; sha256="0hi516cbl93z00jpdgyp3j5hz0xf594vn65p6ahpffwzh1l8s1cf"; depends=[plyr Rcpp RcppArmadillo]; }; - BuildSys = derive2 { name="BuildSys"; version="1.0.9"; sha256="1jm8kdphzngxgaiycnw72h4jlwm8ibmbbrvyqmma6314j4cylr5x"; depends=[digest]; }; + BuildSys = derive2 { name="BuildSys"; version="1.1.2"; sha256="1mqwnr8x883nhd7mpqzc351njdvdqps8w8b106l2b4l2620c546f"; depends=[digest]; }; BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; BuyseTest = derive2 { name="BuyseTest"; version="2.3.0"; sha256="1vawklcxjp7apcq3k29skj2lqx8dwpl46a3rzglxpjm2scx3wy7c"; depends=[data_table doParallel foreach ggplot2 lava prodlim Rcpp RcppArmadillo]; }; Bvalue = derive2 { name="Bvalue"; version="1.0"; sha256="17zlllzjrcq4grggal3hlg384990n62wnflr2g21fa6hcnglwy7d"; depends=[]; }; - C443 = derive2 { name="C443"; version="3.1.0"; sha256="1zaz9709z354c2z0cd7p4d3cq1zsxx6lhy3qq23b0jc3ilfwlkhh"; depends=[cluster ggplot2 gridExtra igraph MASS partykit plyr qgraph RColorBrewer reshape2 rpart]; }; - C50 = derive2 { name="C50"; version="0.1.3.1"; sha256="0ikm0awb6v5iignr1izmcaw6l32gyn3rsinq58panl7gvsl1n58b"; depends=[Cubist partykit]; }; + C443 = derive2 { name="C443"; version="3.2.1"; sha256="19jnn0lghv1a3n6q57almmsqbqzpvab029h4lyy3xpydc8ij8j7b"; depends=[cluster ggplot2 gridExtra igraph MASS partykit plyr qgraph RColorBrewer reshape2 rpart]; }; + C50 = derive2 { name="C50"; version="0.1.5"; sha256="1mqn7xzl9sbx61jhhkiq1gllwf8s6l1cgz7mck53461p6147phgh"; depends=[Cubist partykit]; }; CA3variants = derive2 { name="CA3variants"; version="3.0"; sha256="0n0a4rxaskz94kibcycrsg46w8r515r4pzadvlv6b43qpgwrqh92"; depends=[checkmate ggforce ggplot2 ggrepel gridExtra multichull plotly]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; CAISEr = derive2 { name="CAISEr"; version="1.0.16"; sha256="08br6hdpgf9y2fix299diwd8r3q4gylpbzll4knpxq0vi18a3hz3"; depends=[assertthat ggplot2 gridExtra pbmcapply]; }; - CALF = derive2 { name="CALF"; version="1.0.15"; sha256="0rxdfd23kkyhwz2qc9zilvrvr24xlgd5phkh0164b0x0d96iffmz"; depends=[data_table ggplot2]; }; + CALANGO = derive2 { name="CALANGO"; version="1.0.5"; sha256="1a5573k5w3ldvgv8x384857ychn089fvir9yn0ryis26xmzkfvx5"; depends=[ape assertthat BiocManager dendextend DT ggplot2 heatmaply htmltools htmlwidgets knitr nlme pbmcapply pkgdown plotly rmarkdown taxize]; }; + CALF = derive2 { name="CALF"; version="1.0.16"; sha256="1y3db8yxgman6jx8ghqcqfh201zj1fykinm9rhfbgb0ixk9dq1yc"; depends=[data_table ggplot2]; }; + CALIBERrfimpute = derive2 { name="CALIBERrfimpute"; version="1.0-5"; sha256="1fq9cm8qjbg4353al1xaxyajibpznz7ymqs0302c4z6cr7g4qibb"; depends=[mice mvtnorm randomForest]; }; CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="1.14.1"; sha256="1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc"; depends=[downloader Hmisc reshape2]; }; - CARBayes = derive2 { name="CARBayes"; version="5.2.3"; sha256="0aggjs0718s8a0287x5dbwr01jbr08mzki93a5lxj20z3a69lvz2"; depends=[CARBayesdata coda dplyr GGally leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; - CARBayesST = derive2 { name="CARBayesST"; version="3.2"; sha256="10cqzj8b0krkha747mhdsfcdpaf6g8bzrb2yz3q42s47szq6x8q1"; depends=[CARBayesdata coda dplyr GGally ggplot2 gridExtra gtools leaflet MASS matrixcalc matrixStats MCMCpack Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; + CARBayes = derive2 { name="CARBayes"; version="5.2.4"; sha256="1mk06sjl1cb776b4gy4lyr4nzi2dg6vajjh740jq4s504q6b74aw"; depends=[CARBayesdata coda dplyr GGally leaflet MASS MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="3.2.1"; sha256="0gbn11lmfax6frc70dyl667r4afn36zrjrxxky3rvmry4apqpwl3"; depends=[CARBayesdata coda dplyr GGally ggplot2 gridExtra gtools leaflet MASS matrixStats MCMCpack Rcpp rgdal sp spam spdep truncdist truncnorm]; }; CARBayesdata = derive2 { name="CARBayesdata"; version="2.2"; sha256="06pkhmlkp4hl7c6bgarhab6z640h1xvgw86q1ihipbc432an4gvl"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; - CARRoT = derive2 { name="CARRoT"; version="2.5.1"; sha256="0z5vrsyzfiv1nzggqmrgybfyjg0wdcdag4xjg0f70p5x91fg1cqk"; depends=[doParallel foreach nnet Rdpack]; }; + CARRoT = derive2 { name="CARRoT"; version="2.5.2"; sha256="1dyxmllp01wb2yrmcwb47n5zwyzfrdaqhif4bcpmcgfybqfxical"; depends=[doParallel foreach nnet Rdpack]; }; CARS = derive2 { name="CARS"; version="0.2.2"; sha256="18l2bhfwma24q1zg1y1xmlcmnbzjqmmny3h7s179kslagnh3kmsj"; depends=[np]; }; + CARlasso = derive2 { name="CARlasso"; version="0.1.2"; sha256="05r5n5bh0fpwfigr6czh9pg29zyrw73idfvs9qm8vr3dvcmvc42r"; depends=[coda ggplot2 ggraph igraph MASS Matrix Rcpp RcppArmadillo RcppProgress]; }; CASMAP = derive2 { name="CASMAP"; version="0.6.1"; sha256="1447d4gflan2093fb68inb2ysx5svb9vhnjc7lnkgpjsiam4p8yy"; depends=[Rcpp]; }; CAST = derive2 { name="CAST"; version="0.5.1"; sha256="0ph71nwp6zibmgy324aqqcwx2p2m75560q2nglm6rg8bww9wib6x"; depends=[caret data_table FNN ggplot2 lattice plyr reshape zoo]; }; CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; }; @@ -601,10 +618,11 @@ in with self; { CBT = derive2 { name="CBT"; version="1.0"; sha256="13h6sf7w03nfq2arqymwww13ywnv9xnqbqazlzn856mj3ggaqda7"; depends=[]; }; CC = derive2 { name="CC"; version="1.0"; sha256="189si37ggichqmzy8m686zw1cijix7yfy8ma5iqpnq1q9vm3pcvy"; depends=[]; }; CCA = derive2 { name="CCA"; version="1.2.1"; sha256="1l4vp8yd42rpsm40szjfzhvbb5c7kl7yf4346i0940s6gk7bzzi8"; depends=[fda fields]; }; - CCAMLRGIS = derive2 { name="CCAMLRGIS"; version="3.0.6"; sha256="1xcxg3k0qgsh85l60sr9mi7a1mjjrw0rim4k05piwr2binwn1s1c"; depends=[dplyr geosphere magrittr raster rgdal rgeos sp]; }; + CCAMLRGIS = derive2 { name="CCAMLRGIS"; version="3.2.0"; sha256="0y57r4mr8i728z0fcf5apnpjlfx9bd1900xw566xnizyll208w19"; depends=[dplyr geosphere magrittr raster rgdal rgeos sp]; }; CCM = derive2 { name="CCM"; version="1.2"; sha256="1mhl7yppniybdffylddbbb65n7gmv029fb46wlsxm4yf2xkplmwy"; depends=[]; }; CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; CCTpack = derive2 { name="CCTpack"; version="1.5.2"; sha256="1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; + CCWeights = derive2 { name="CCWeights"; version="0.1.3"; sha256="1crfrcsaf49ys0i36r72w62257qw5znw3cjx6380ihnl35h1wn3m"; depends=[bs4Dash dplyr DT fresh magrittr plotly readr readxl rmarkdown shiny]; }; CCpop = derive2 { name="CCpop"; version="1.0"; sha256="10kgw3b98r0kn74w89znq6skgk8b3ldil6yb0hn5rlcf6lazjzca"; depends=[nloptr]; }; CDFt = derive2 { name="CDFt"; version="1.2"; sha256="19axaf3bh9gasnsfamd5ych1jn751scaplgwpmsf3liazcqqpa61"; depends=[]; }; CDLasso = derive2 { name="CDLasso"; version="1.1"; sha256="0n699y18ia2yqpk78mszgggy7jz5dybwsi2y56kdyblddcmz1yv7"; depends=[]; }; @@ -614,17 +632,17 @@ in with self; { CDSeq = derive2 { name="CDSeq"; version="1.0.8"; sha256="06pjp9hn9ziz4wgkaj0r0zzw69r7635j10rmnl331abc4mchpazy"; depends=[Biobase clue dirmult doParallel dplyr foreach ggplot2 ggpubr gplots iterators magrittr MASS Matrix matrixStats qlcMatrix Rcpp RcppArmadillo RcppThread rlang Seurat]; }; CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; CDatanet = derive2 { name="CDatanet"; version="0.0.1"; sha256="05nh56w18bf1yk2i74ppslvd3307b6pqif7bbjcgm8q6nha2mrfq"; depends=[ddpcr Formula formula_tools Matrix Rcpp RcppArmadillo RcppProgress]; }; - CEC = derive2 { name="CEC"; version="0.10.2"; sha256="03fxhqlpn7x3djfanlix3yzf1cy6zf854g70gq2d93ix9gis7knv"; depends=[]; }; + CEC = derive2 { name="CEC"; version="0.10.3"; sha256="0yypiy5xxrlckly4qpnf1wxg4hwza4y4da6y0jz4ldz918vskaci"; depends=[]; }; CEDARS = derive2 { name="CEDARS"; version="1.90"; sha256="1fngyc08kvilfd2d75gjg0s6c5zvjywym35sk568yzxnsz89b7yy"; depends=[fastmatch jsonlite mongolite readr shiny udpipe]; }; - CEGO = derive2 { name="CEGO"; version="2.4.0"; sha256="1rmx9ppiw7k5cznanz3m4lnhriz3fs4f7wk5h3q9wg9cyzfjhh38"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; - CENFA = derive2 { name="CENFA"; version="1.1.0"; sha256="03l0i24m2mh0gfmg7b48qg15zmfr8a39l1nswvmbmcj2a5hxybf4"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; + CEGO = derive2 { name="CEGO"; version="2.4.2"; sha256="00nc6c1b6ylqlh6hm8lh8nasz7q12pqckdqbf1yq21khki9ldbll"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; + CENFA = derive2 { name="CENFA"; version="1.1.1"; sha256="0b1zpazbqynlnmf8k25r5bjmidymskqc96xpmwqkl23xlz1f2x3s"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; - CFAcoop = derive2 { name="CFAcoop"; version="0.1.0"; sha256="11p53kr15s6xmv0wmn93n71dja2rkivkb5f83lhpy6iv5ihcf1wq"; depends=[Hmisc mvtnorm]; }; + CFAcoop = derive2 { name="CFAcoop"; version="1.0.0"; sha256="1qnqbqh3p8grp6mxhqrwfm1nf1sxhqa6pjxkpf7vk9nx40g815gn"; depends=[Hmisc]; }; CFC = derive2 { name="CFC"; version="1.1.2"; sha256="0k0685cgsd0lm7id6h216r4x236xn3nqj4h906qn2i0kvwmx4nda"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; CFF = derive2 { name="CFF"; version="1.0"; sha256="04z3q0s4b1yns5l7lplw8qrcdjzsdy9crnhakyzd6r449hjfsvnz"; depends=[]; }; CFilt = derive2 { name="CFilt"; version="0.2.1"; sha256="1iah41s0pd8s4vmg7r6npsgmfr6mvyp5wfnyimx51fqr2f3narwf"; depends=[]; }; CGE = derive2 { name="CGE"; version="0.3.3"; sha256="0q1fv62159cx9z25488fxf6a6fi1m59hdh60ldypsjwil77q0s3i"; depends=[]; }; - CGGP = derive2 { name="CGGP"; version="1.0.2"; sha256="0z71sl1vsz3f84scxa25444fb6wm1jbd05syapggjxnjcglmiq45"; depends=[Rcpp RcppArmadillo]; }; + CGGP = derive2 { name="CGGP"; version="1.0.3"; sha256="1g70hjpc33dnr6yw42kjhy9ngba05qzk5mr7md6pqhmbx0ykhr6g"; depends=[Rcpp RcppArmadillo]; }; CGManalyzer = derive2 { name="CGManalyzer"; version="1.3"; sha256="1wmp5im18s447rjkj891skrm7558xkqlbx43n9hyxiqg49zq1ng9"; depends=[]; }; CGP = derive2 { name="CGP"; version="2.1-1"; sha256="05a6gydlb99yk2jpy2hyg4c30hqyp8dg2i9dmbjc1n5cmgpg3im9"; depends=[]; }; CGPfunctions = derive2 { name="CGPfunctions"; version="0.6.3"; sha256="12l3ww9wfrk8i0a63wv5h4ayqj6fj5fz5yvkiskvaaida32vds2m"; depends=[BayesFactor DescTools dplyr forcats ggmosaic ggplot2 ggrepel paletteer partykit purrr rlang scales sjstats stringr tidyr]; }; @@ -636,24 +654,28 @@ in with self; { CHOIRBM = derive2 { name="CHOIRBM"; version="0.0.2"; sha256="1ak9swfnc0i23pv6mg5bav09pb7v0afdr7h08s1pyd77wyzf95df"; depends=[ggplot2 rlang stringr]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.3"; sha256="0yhay4fp5lyf0sdcf807yvys17qz9cr5f5ikim25mq336p7fp03x"; depends=[Matrix mvtnorm numDeriv stringr]; }; + CICA = derive2 { name="CICA"; version="0.1.0"; sha256="0f765c1sqvcg11071008vn6gnk0v0lwmlhnqxgqy0r8cw05s2ggq"; depends=[ica NMFN]; }; CIEE = derive2 { name="CIEE"; version="0.1.1"; sha256="03kq9cp0v41y0r2l9j5imcrsail2xsvlzhhhsrw454d4s9gqdql9"; depends=[survival]; }; CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; }; CIM = derive2 { name="CIM"; version="1.0.0"; sha256="02l8rspiiv6vj6k0q6wpiazny3f2s4dsivsm7zb9cm90qh1rv2d7"; depends=[]; }; - CIMTx = derive2 { name="CIMTx"; version="0.2.0"; sha256="1l9wnywgmljawbj2q4g93dlh4mx5zgvm7nj9dan3dvvimb1v9vl0"; depends=[arm BART car class dbarts dplyr gam magrittr Matching nnet SuperLearner tidyr tmle twang WeightIt]; }; + CIMTx = derive2 { name="CIMTx"; version="0.3.0"; sha256="1f3i3x6kigfj6jkhgiywa2md8yav5ski080wk17dr2wim6w0nn4d"; depends=[arm BART car class dbarts dplyr gam magrittr Matching nnet SuperLearner tidyr tmle twang WeightIt]; }; CINID = derive2 { name="CINID"; version="1.3-0"; sha256="06n5bwjr44rx0m12xradzaca26rvh01mlimbn0gr3jfzkmyj2f1g"; depends=[]; }; CINNA = derive2 { name="CINNA"; version="1.1.54"; sha256="1fvyxgcvdi3h7cysl08n7gzs5dmv3f9rcw1ds29l8n8w9rz6j7rb"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph intergraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; + CINmetrics = derive2 { name="CINmetrics"; version="0.1.0"; sha256="1csh22b7ap7isnrjak7yp32hasxq8x4j094i9shrnzsz6sxcmc28"; depends=[]; }; CISE = derive2 { name="CISE"; version="0.1.0"; sha256="10mbi4v8dfdc9ngnrrmxpng8fnig5m8nv7799jksbcf6pnj8yv51"; depends=[far gdata glmnet MASS Matrix rARPACK]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; CJAMP = derive2 { name="CJAMP"; version="0.1.1"; sha256="0caznbqy5hsp7h0gkdbv966vfpq8z1khvbizi4vpc9mxck1nqc99"; depends=[optimx]; }; CKAT = derive2 { name="CKAT"; version="0.1.0"; sha256="03vxl91z2mhi1h0xgcwhw63mvj56156zgphm16ijdff63pqxaryr"; depends=[CompQuadForm]; }; CKLRT = derive2 { name="CKLRT"; version="0.2.3"; sha256="1d8sg3ncns3fpjaghz1h1z9nfrl31v09xijrzzsias8xjrpi191b"; depends=[MASS mgcv nlme Rcpp RcppEigen]; }; + CKMRpop = derive2 { name="CKMRpop"; version="0.1.3"; sha256="0d4sai2h2cfzh4hbg8yh7wqb459j948j3s0m218d3gcippm22jpb"; depends=[dplyr ggforce ggplot2 ggraph igraph magrittr purrr Rcpp readr stringr tibble tidygraph tidyr vroom]; }; CLA = derive2 { name="CLA"; version="0.96-1"; sha256="1nxzs0y6mid5f2903pxrkqc3rhk7vpax8wm588ddlz6c97y3m8gk"; depends=[]; }; CLME = derive2 { name="CLME"; version="2.0-12"; sha256="161maq22r8wbd6c2dc8b47mh6991vc4iqmjr8g6yqb5gcwca8zhg"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; CLONETv2 = derive2 { name="CLONETv2"; version="2.1.0"; sha256="15wqs4hdxyfdglfr4dkm4rndz15rbq7dxlq1zq3vfslvi1qxaxdb"; depends=[arules ggplot2 ggrepel sets]; }; CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; CLUSTShiny = derive2 { name="CLUSTShiny"; version="0.1.0"; sha256="19mh5g1ylvlab4xjxw7girxk9zkpxxczhbfijf11b592hbw0qxqk"; depends=[cluster dplyr klaR MASS psycho rmarkdown shiny]; }; CLVTools = derive2 { name="CLVTools"; version="0.8.0"; sha256="05gj95v61hys4vrdpb8i61wry11z1kl8jhhr7997v1fmd290sbkd"; depends=[data_table ggplot2 lubridate MASS Matrix optimx Rcpp RcppArmadillo RcppGSL]; }; + CMAPSS = derive2 { name="CMAPSS"; version="0.1.1"; sha256="1rig2v1cl9ybnbikqfwbp4ji1jcxm6383xbdf8wz2f3lxk7iis8z"; depends=[Rdpack]; }; CMC = derive2 { name="CMC"; version="1.0"; sha256="1r9a5k79fyw01yiwxq02327hpn4l1v2lp0958jj9217wxmhn3pr5"; depends=[]; }; CMF = derive2 { name="CMF"; version="1.0.2"; sha256="0hm6srsylg1syz86iz93qyxr7xgh1qvmp27k2hgkj1z1z8lsw1ca"; depends=[Rcpp]; }; CMLS = derive2 { name="CMLS"; version="1.0-0"; sha256="1542qqsl6sksrcpwhnn55d260hkbmy4ikd0v2an96yxk5w95spvn"; depends=[quadprog]; }; @@ -665,12 +687,14 @@ in with self; { CNLTreg = derive2 { name="CNLTreg"; version="0.1-2"; sha256="07yi0ajil1113663v3gp5d3453r4l9qm442jnpydx4ygvjk7m2ha"; depends=[adlift miscTools nlt]; }; CNLTtsa = derive2 { name="CNLTtsa"; version="0.1-2"; sha256="1vy0jjg6s8yvsvkx4pin183y5bnikm5cmjcpa9znz9dj1w6hwr5r"; depends=[adlift CNLTreg fields nlt]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; - CNVRG = derive2 { name="CNVRG"; version="0.2"; sha256="1678bkhpyynl0vzgdf9knn4xwa3289pmiw7x383fgv3hh8jsp1mn"; depends=[BH Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders vegan]; }; - CNVScope = derive2 { name="CNVScope"; version="3.5.6"; sha256="0s05h345icmd2zvd86vbjqpaz6aq9wf43gd4pwimcrpzs9k3gccv"; depends=[biomaRt data_table doParallel dplyr foreach GenomicInteractions ggplot2 jointseg magrittr Matrix matrixStats numbers OpenImageR plyr RCurl reshape2 rtracklayer shiny stringr tidyr]; }; + CNPS = derive2 { name="CNPS"; version="1.0.0"; sha256="046jd4nh54qaqm85m74nvgj6x83mf8sd76y4dxydy4ydrk4cvz6p"; depends=[]; }; + CNVRG = derive2 { name="CNVRG"; version="1.0.0"; sha256="0xr2c5yc9g8hqw5dy5k2y0pm54sdrrbafsc3cpafpwaf803vdrbk"; depends=[BH Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tibble vegan]; }; + CNVScope = derive2 { name="CNVScope"; version="3.6.0"; sha256="1p1kn48ib11f5f7k4c7iy92vplv9csgyabgmxcy3bnv9q20b10an"; depends=[biomaRt data_table doParallel dplyr foreach GenomicInteractions ggplot2 jointseg magrittr Matrix matrixStats numbers OpenImageR plyr RCurl reshape2 rtracklayer shiny stringr tidyr]; }; CNprep = derive2 { name="CNprep"; version="2.0"; sha256="08dpjikx3ldqzw2kwb12q0kbw15qzl09srjdfs0sz9si0x6bfxs6"; depends=[mclust rlecuyer]; }; CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; }; + COINr = derive2 { name="COINr"; version="0.5.5"; sha256="1qj6ajdmqjw3gw5yrw4537azbnhn2q1fhiqfx0s9sb1hgfzhkxg3"; depends=[Amelia corrplot dplyr e1071 ggplot2 magrittr matrixStats openxlsx plotly purrr reactable readxl reshape2 rlang rmarkdown shiny stringr tibble tidyr]; }; COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.7.0"; sha256="144vf3vfn5msc8p67q65frza8xyi9nqccjq47fnv33w5h0d9wlxj"; depends=[Rcpp]; }; CONCUR = derive2 { name="CONCUR"; version="1.3"; sha256="1xkk5mbkysgrclv7km2pf4bnnm99a9q0dkb68vllrdmzsphjmxp9"; depends=[CompQuadForm dplyr mgcv]; }; @@ -682,12 +706,14 @@ in with self; { COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; }; COVID19 = derive2 { name="COVID19"; version="2.3.2"; sha256="0ipsjmvsd2sngwgchv9mbhipxqlsysaa4vmla198bprzj1r6m424"; depends=[dplyr tidyr]; }; - COVIDIBGE = derive2 { name="COVIDIBGE"; version="0.1.4"; sha256="0yc1aqndbxrbycfqsc6hmdja7pa5mcvkqkrc1lpzw3njci97w51h"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; + COVIDIBGE = derive2 { name="COVIDIBGE"; version="0.1.5"; sha256="1ppncp8zws4bzdjvynqr5naj46l8d7h49kmmrqm3ybvg455v8c2g"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; }; CPAT = derive2 { name="CPAT"; version="0.1.0"; sha256="0zygncwww3cazwmx06bhzq0g41xcqfpw307azdhygc8jmcy6qj71"; depends=[purrr Rcpp RcppArmadillo Rdpack]; }; CPBayes = derive2 { name="CPBayes"; version="1.1.0"; sha256="1kw0r8spqm0s7cb3w5gplw67mhfmcbbf3ligngbary77ghkzirnb"; depends=[forestplot MASS mvtnorm purrr]; }; CPE = derive2 { name="CPE"; version="1.5.1"; sha256="0n3pd6daj0mzhh547syh7nz8iys6q27igqngldb8zd4ib4778603"; depends=[rms survival]; }; + CPGLIB = derive2 { name="CPGLIB"; version="1.0.1"; sha256="18gf0l7fqfi4vl0aylna6s7n6f4kwlaxkqnbdy2qgrvr5vs2j0qn"; depends=[Rcpp RcppArmadillo]; }; CPMCGLM = derive2 { name="CPMCGLM"; version="1.2"; sha256="07hx2ik5zg05w1h6i94398mp54q958phws9ydgp6syjqlp9dpf1p"; depends=[abind mvtnorm plyr]; }; + CPNCoverageAnalysis = derive2 { name="CPNCoverageAnalysis"; version="1.0.0"; sha256="1p8acishza12vl8ivs4jv32pywq8arr3bjh4x2z5n1v1smasq3y6"; depends=[]; }; CPP = derive2 { name="CPP"; version="0.1.0"; sha256="1kdf43pnavjbmxkvrj78fiwl0ykln9x9ck8pcivhj9q5rsfbhbh4"; depends=[ineq kappalab mc2d]; }; CPsurv = derive2 { name="CPsurv"; version="1.0.0"; sha256="1r68pp3jbcbwgfac132h30qx6ah780aychr49rlncn17xbdalxsh"; depends=[muhaz survival]; }; CRAC = derive2 { name="CRAC"; version="1.0"; sha256="0vnqmmmwakx5jnzqp20dng35p7rvmz3ypm2m7bs41m8nhh2wq1xa"; depends=[]; }; @@ -695,14 +721,15 @@ in with self; { CREAM = derive2 { name="CREAM"; version="1.1.1"; sha256="1lccpwn6c5pmykgf689gvvpqdcilkys4vclpxjhllhanjrfhcs3q"; depends=[]; }; CRF = derive2 { name="CRF"; version="0.4-3"; sha256="0jlcc1ffd2z7sz1szbi4vrp5rihmcp18bsw27x02ivi6l21nyivf"; depends=[Matrix]; }; CRM = derive2 { name="CRM"; version="1.2.4"; sha256="0jv2z1y3zyj1m86p4pmqww58hj8pvid1ss6ym67y46n9srzxsmj5"; depends=[]; }; - CRPClustering = derive2 { name="CRPClustering"; version="1.2"; sha256="19m7jg6ck2gqmry2p35h3vv8msm4w1x7qwwmm746r646q7w9ylml"; depends=[dplyr lucid MASS mvtnorm png randomcoloR]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; CRTgeeDR = derive2 { name="CRTgeeDR"; version="2.0"; sha256="1fzw8618k152b8d4d6wmzp0bfkz2grwp0rqsplwvfdx23nxq437n"; depends=[ggplot2 MASS Matrix]; }; CRWRM = derive2 { name="CRWRM"; version="0.0.1"; sha256="0w6lg5q2c0w5p9vg5qr32pycyl8d1zp0s55jlvf2xhmqx34677hd"; depends=[]; }; CSESA = derive2 { name="CSESA"; version="1.2.0"; sha256="0pv6iabq1w22qbhlsbckdvva4n7igpzrjnrahmq83a6wxgvjbf5j"; depends=[Biostrings]; }; CSFA = derive2 { name="CSFA"; version="1.2.0"; sha256="1nkyhk8qhrrlx8v26yw86l954m4xfcxma4pqbhgw95jvqql5h3li"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; - CSGo = derive2 { name="CSGo"; version="0.5.2"; sha256="19iac6pp4y2vpx1q5zg41pkjwhddwayv0vharl8xd0hr0wqwzxwc"; depends=[dplyr extrafont fuzzyjoin ggplot2 httr jsonlite magrittr purrr stringr]; }; + CSGo = derive2 { name="CSGo"; version="0.6.7"; sha256="19awbblkx0g58gvd43xs1dmcsn588k185njw3fri8xxbn26xp5jy"; depends=[dplyr extrafont furrr future fuzzyjoin ggplot2 httr jsonlite magrittr purrr stringr]; }; + CSIndicators = derive2 { name="CSIndicators"; version="0.0.1"; sha256="1d0mdbgg4y9773di8a86c8lss5f29c936pa7qv7vvznyc7mxkqzz"; depends=[ClimProjDiags multiApply s2dv]; }; CSMES = derive2 { name="CSMES"; version="1.0.0"; sha256="1ddr2b39d7nwan6dqf5xx9h6gzfxxk50r1d9vbpb9hc8a7d15vnp"; depends=[caTools data_table mco ROCR rpart zoo]; }; + CSTE = derive2 { name="CSTE"; version="1.0"; sha256="18nsl0rvr3fiy8q7himd04da9yk99ylsz6ss0028nwz5bxhacn3a"; depends=[fda Rcpp survival]; }; CSTools = derive2 { name="CSTools"; version="4.0.0"; sha256="04i08990glac58yj8plx3a6yhjs0kx1zir7as1mgwsa74q9r3c8y"; depends=[abind ClimProjDiags data_table easyVerification ggplot2 maps multiApply ncdf4 plyr qmap rainfarmr RColorBrewer reshape2 s2dv s2dverification verification]; }; CSUV = derive2 { name="CSUV"; version="0.1.1"; sha256="1gh8gxwnrg4j017c08xfhm57rwci24sqmxxx00k3d0mw6j0mbdvw"; depends=[caret doParallel DT futile_logger ggplot2 glmnet HDCI MASS ncvreg relaxo reshape2 shiny shinyjs]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; @@ -738,6 +765,7 @@ in with self; { Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.3"; sha256="03qg9rnz623dwnp68xhhsh9788s49n6xp0migg1nnjaqhrahlgdd"; depends=[]; }; CalibratR = derive2 { name="CalibratR"; version="0.1.2"; sha256="1hnmhijckxd35h8mhpzqpglk1ykdih2c5kg17myc7cci5xjk9nfr"; depends=[doParallel fitdistrplus foreach ggplot2 pROC reshape2]; }; CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.3.0"; sha256="0qwqvyrpprxc5v0ng6qjp9gmdf0n0iiv46z14d8h303xpi84g42x"; depends=[survey]; }; + CallEshotgun = derive2 { name="CallEshotgun"; version="0.2.0"; sha256="09xi0867vi0x244ahg9rrm2rr6f9x7fzrmlifb098akik2pvfn20"; depends=[reticulate]; }; CamelUp = derive2 { name="CamelUp"; version="2.0.3"; sha256="1d3ywb4bxnn149api6lqry8q9lasng79hzka9ndr5cv38pkbvva9"; depends=[data_table dplyr ggplot2 magrittr Rcpp shiny]; }; CancerGram = derive2 { name="CancerGram"; version="1.0.0"; sha256="1p612dbn6dxn3nz8m0pzlsbczg3f8gwqk9q0fnxbcdlbll0vf2k0"; depends=[biogram devtools dplyr pbapply ranger shiny stringi]; }; Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; @@ -748,11 +776,12 @@ in with self; { CatDataAnalysis = derive2 { name="CatDataAnalysis"; version="0.1-3"; sha256="15wz7yjb83rd6d3xx0lb0p4x3ccnqpdkfanmbhykia50y8y32k5n"; depends=[]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-1"; sha256="0gkaxs7apqhq7mp3chjsyhrnk3qkk11f8p7smmyj6h73888ry8jn"; depends=[BB optimx]; }; CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; }; - CatReg = derive2 { name="CatReg"; version="2.0.2"; sha256="0f1lnrfa70cpqj58655y50h9cw8sqzbfvl9ck9a2xyjv2a7c41mi"; depends=[Rcpp Rdpack]; }; + CatReg = derive2 { name="CatReg"; version="2.0.3"; sha256="02pxarc4v45w8ncx8hq084m69qgl9s2lkrv1biz60vrvl99dg016"; depends=[Rcpp Rdpack]; }; CateSelection = derive2 { name="CateSelection"; version="1.0"; sha256="194lk6anrb05gaarwdg8lj5wm6k61b4r702cja3nf3z91i8paqi7"; depends=[]; }; CauchyCP = derive2 { name="CauchyCP"; version="0.1.0"; sha256="012aw8cgrwwcsbs93nfsdlv1j72mc96gaxvdrhs9njqd9anamsgl"; depends=[survival]; }; CausalGAM = derive2 { name="CausalGAM"; version="0.1-4"; sha256="1riz11hfg96iks7734rg692l75nfrd3hmr9gw563j27rkk1nfkl6"; depends=[gam]; }; - CausalImpact = derive2 { name="CausalImpact"; version="1.2.6"; sha256="19idwk5hbajgzzhb2cwi49n0ivpn7k35b9f38jrhx1n055pf73md"; depends=[assertthat Boom bsts dplyr ggplot2 zoo]; }; + CausalGPS = derive2 { name="CausalGPS"; version="0.2.6"; sha256="0ynqyjm3a9cqq3dfkcfc5bj0gj6idrhibmfq1vyllai5v19s8p28"; depends=[data_table earth gam ggplot2 gnm KernSmooth logger MASS polycor ranger Rcpp rlang SuperLearner tidyr wCorr xgboost]; }; + CausalImpact = derive2 { name="CausalImpact"; version="1.2.7"; sha256="1sbi58zs39cxyq4h8d9h9w2s2qbnj5jkpc68cibwxlzkyllaks52"; depends=[assertthat Boom bsts dplyr ggplot2 zoo]; }; CausalKinetiX = derive2 { name="CausalKinetiX"; version="0.2.1"; sha256="0haxw4vvbw48hlvsl1d1y3xm48qm5vl0d3k5lj89ajwc618nk5jg"; depends=[cvTools deSolve fda glmnet pspline quadprog randomForest sundialr]; }; CausalMBSTS = derive2 { name="CausalMBSTS"; version="0.1.0"; sha256="19ils8254vrbm3hbrjkk2r7xczr52zjhd38dfy7p1ksd2lm6x5qy"; depends=[CholWishart forecast KFAS MASS Matrix MixMatrix]; }; CausalQueries = derive2 { name="CausalQueries"; version="0.0.3"; sha256="1hnxxyix9zrg5ryzqksv0cl8m3n3n660dbg1msa0pn18dnbjbmj0"; depends=[BH dagitty dplyr gtools randomizr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr]; }; @@ -774,14 +803,14 @@ in with self; { ChannelAttribution = derive2 { name="ChannelAttribution"; version="2.0.4"; sha256="1m9fwlkd39q5dmlw71rasj2cjnlj03295ck9lgb7yl72v7sws22d"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.3"; sha256="0n9g8wwvc8p5clypl7z23w8fs6d0c47bblijwd4pjwy26bcb4m8h"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; Chaos01 = derive2 { name="Chaos01"; version="1.2.1"; sha256="1wk70l1y0yzbjcjp0r334l1q3hzki0vzn6wbza97mq9pz8wp050r"; depends=[]; }; - ChaosGame = derive2 { name="ChaosGame"; version="1.0"; sha256="18w2mq42x5ap9h31plh1j1ja4js4yjynz801xscgqhjr9r5d8kdx"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; + ChaosGame = derive2 { name="ChaosGame"; version="1.1"; sha256="1gwrym3vjcqlj0ih479ipbajypajy9ga9sr3laj7g5zxx3cm4y4c"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="5.3.11"; sha256="16kvms13k5m5f26zhwy37jjzn73q06qmh4wvdk49ry3hqakcnyry"; depends=[ChemoSpecUtils plyr readJDX]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="5.3.21"; sha256="14n8p1925f8h1awikxj4w0lah260k0ylnxn7dwbag5g16qq36h12"; depends=[ChemoSpecUtils plyr readJDX]; }; ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.4.187"; sha256="1rdb47gd5kpm9q15js4q3hdpja5zxq9ghjk3fwkqi4ivnxgpmg6r"; depends=[ChemoSpecUtils colorspace readJDX]; }; ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.4.96"; sha256="15pbpfl3h351p4s0k5jw5i8l1dkafv4g420q9dh9k7qnhh3s8rzc"; depends=[plyr]; }; ChillModels = derive2 { name="ChillModels"; version="1.0.2"; sha256="06hgg893anh5z8an4l1xl4liz7d0m79n21h116vkdlymayccydbr"; depends=[]; }; - ChineseNames = derive2 { name="ChineseNames"; version="1.0.0"; sha256="13hvapf5n743y6rqkrhfqan0ascmvl2jkv47ygxmxq99kddaxw4x"; depends=[bruceR data_table]; }; + ChineseNames = derive2 { name="ChineseNames"; version="1.1.0"; sha256="15dqr288skbh8fbnx1ikzla4wsvlxcd20qg8bd7w84f9cdi57m9z"; depends=[bruceR data_table]; }; ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; CholWishart = derive2 { name="CholWishart"; version="1.1.0"; sha256="1p92i5ibv9805fg8s5wrpxx63k4c1ihs1x2zlaz9vbkqypkl8aqz"; depends=[]; }; @@ -798,56 +827,58 @@ in with self; { ClaimsProblems = derive2 { name="ClaimsProblems"; version="0.1.0"; sha256="1v2bs6mz2jfsv4v3p3gmmpv8fg565nbqcnfcg6clgs9d54w6qrnm"; depends=[geometry rgl]; }; ClamR = derive2 { name="ClamR"; version="2.1-1"; sha256="0raz1n79g24a9mc93zj49r20xcmdziw6vvcw5sd3qyjp1ycia13c"; depends=[]; }; ClassComparison = derive2 { name="ClassComparison"; version="3.1.8"; sha256="0fd5s4697pvj295fzvvn5mislf42wfzrcvks17v98388rph586gl"; depends=[Biobase oompaBase]; }; - ClassDiscovery = derive2 { name="ClassDiscovery"; version="3.3.13"; sha256="08ngmp77aff3dhh711wmzybk4ial2lv9750g3w19l0wjjd1rsm0m"; depends=[Biobase cluster mclust oompaBase oompaData]; }; + ClassDiscovery = derive2 { name="ClassDiscovery"; version="3.4.0"; sha256="06l7jvpcdynij05hb0ka33zpg7xdyqyzfzx24s0bnlspp83yc62s"; depends=[Biobase cluster mclust oompaBase oompaData]; }; CleanBSequences = derive2 { name="CleanBSequences"; version="0.4.0"; sha256="12s24v2kfyc32pm34ibw58zzjqhzwlrqrkhl0m70jcqvn50b5r98"; depends=[Biostrings]; }; ClickClust = derive2 { name="ClickClust"; version="1.1.5"; sha256="0b46f453mffg4ym6yvmh7g3v05mc9gphwfra75j28y1425s87yvw"; depends=[]; }; ClickClustCont = derive2 { name="ClickClustCont"; version="0.1.7"; sha256="1caymvpwvxq4rirnjm2kwzvqm1pl01rdc3785k8mq4k2m0n6l2rz"; depends=[gtools]; }; CliftLRD = derive2 { name="CliftLRD"; version="0.1-1"; sha256="0qsdv568klxg6chgw329jbfjmf6w61hly2vxp90yzdfkca03z2s4"; depends=[CNLTreg liftLRD]; }; ClimClass = derive2 { name="ClimClass"; version="2.1.0"; sha256="1r836md31z2r5d9xckkbalzbhm4kf5paljv71kxpy53q92k7yi91"; depends=[geosphere ggplot2 reshape2]; }; - ClimDown = derive2 { name="ClimDown"; version="1.0.2"; sha256="0dbv5vn985bi9nqxhq7jcj6k38s8dlbqnln3adgd0ih2fwilvalg"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; + ClimDown = derive2 { name="ClimDown"; version="1.0.8"; sha256="0qcag9jwvhi9yss55wy5jxabrvym9hljn1fs5gfkzjs5hiwv3gxv"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; ClimInd = derive2 { name="ClimInd"; version="0.1-3"; sha256="0n5kd001nkpks16c3msvn2qvzyrjawa2rqwh8zph2qr5hgpwcpg7"; depends=[chron SPEI weathermetrics]; }; ClimMobTools = derive2 { name="ClimMobTools"; version="0.3.9"; sha256="1mdzsmv0zc6jm5awppy9b1xqg29vy3j9lm2d88d7p6kag47z2n3n"; depends=[climatrends httr jsonlite Matrix PlackettLuce RSpectra]; }; ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.1.1"; sha256="16ygjdmdh4rys27iskd457gp4s15h48f7zmddi9qgam1klw3vza2"; depends=[climdex_pcic multiApply PCICt plyr]; }; ClinSigMeasures = derive2 { name="ClinSigMeasures"; version="1.0"; sha256="0fw89a1q92ck32z6w4zn1ldvky6ag1gi7b9bbv10mhmqhq4w3k58"; depends=[]; }; ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="1.1.1"; sha256="0b5by4sn9yvrvxr9921yqsgp8ma3g1hi2qbp5j9m836db1zjhyla"; depends=[Rcpp]; }; ClinicalUtilityRecal = derive2 { name="ClinicalUtilityRecal"; version="0.1.0"; sha256="17xj9cmdkjrzx7mshka2hlkxh8887sprdqix7fd8jcr9bmc6ad9r"; depends=[caret cowplot ggplot2 lattice nloptr]; }; - CliquePercolation = derive2 { name="CliquePercolation"; version="0.2.0"; sha256="1zllhl1674734sr0hmfgwdyqlk4rcjdqqrd7rx30llqri478jdff"; depends=[colorspace igraph magrittr Matrix Polychrome qgraph]; }; + CliquePercolation = derive2 { name="CliquePercolation"; version="0.3.0"; sha256="0wd8pbi0p19vyhnf6yjwhfzc4s95hhpp26hy97jwx9bg8ahcd4hj"; depends=[colorspace igraph magrittr Matrix pbapply Polychrome qgraph]; }; CloneSeeker = derive2 { name="CloneSeeker"; version="1.0.10"; sha256="1mpzcbwrrah7kf60l6khdqd4nivm6hpp5xmgg40rahph4wl5ydfp"; depends=[combinat gtools quantmod]; }; CluMP = derive2 { name="CluMP"; version="0.8.1"; sha256="1vpxl2rcknqx32b94b48iirkh7r7cdri9mcljrw29gsbvhrfc46k"; depends=[amap data_table dplyr ggplot2 MASS NbClust rlang tableone]; }; ClueR = derive2 { name="ClueR"; version="1.4"; sha256="0awl3ag48idg0396hcgqrh5f16mbgximr5xbxjiimib5zysdc558"; depends=[e1071]; }; ClusBoot = derive2 { name="ClusBoot"; version="1.0"; sha256="1wh9mv932zarl8w098lgv2jpanp6r8nzdkyayv8nxk7nddl0bn1k"; depends=[]; }; - ClusTorus = derive2 { name="ClusTorus"; version="0.0.1"; sha256="18166ffq8zsl3hjsr48qgqgdnwfpi8h6vcdx01ak1q67jkzqnw0w"; depends=[BAMBI ggplot2 igraph purrr rlang]; }; + ClusPred = derive2 { name="ClusPred"; version="1.0.0"; sha256="14497si4wwsi17fc9b5vn2bkral84dvhgq40hqqsp4hdq88mp34s"; depends=[ald ALDqr quantreg Rcpp RcppArmadillo VGAM]; }; + ClusTorus = derive2 { name="ClusTorus"; version="0.1.3"; sha256="1dklyiamwdhakrc7k9vgypr6rx567g4664zmn2mxsg53rhb7hqfb"; depends=[BAMBI ggplot2 igraph purrr rlang]; }; ClusVis = derive2 { name="ClusVis"; version="1.2.0"; sha256="06yckdl3gxjia1gjjqpc29lvy4f7qf47fncslng9ggjnks6il145"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; ClussCluster = derive2 { name="ClussCluster"; version="0.1.0"; sha256="1436849m2mnm8j7lf653zv8lcvvg2ch8kkks4bvr39kx21wxy8ss"; depends=[ggplot2 reshape2 rlang scales VennDiagram]; }; ClustAssess = derive2 { name="ClustAssess"; version="0.1.1"; sha256="1was06w9glqg8dgawx40jkxngcr04bm58yjqyi9fy0qzvcf9m78x"; depends=[dplyr fastcluster ggplot2 igraph magrittr Matrix Rcpp rlang]; }; - ClustBlock = derive2 { name="ClustBlock"; version="2.3.1"; sha256="16dhwrpw6c8l9nzk2k3wryhz9ydmnl3va1ncab6wl52gzdbd7c9j"; depends=[FactoMineR]; }; + ClustBlock = derive2 { name="ClustBlock"; version="2.4.0"; sha256="1bl0a32il4ai181q5s2fvmpm4jbqwxjvrrxwkaqxb7dnb846cmv0"; depends=[FactoMineR]; }; ClustGeo = derive2 { name="ClustGeo"; version="2.0"; sha256="1p5k2w1k7hnacbazzj2yhxh4z2jngnsl4v5a9b3c8z1dr4nhcwxc"; depends=[sp spdep]; }; + ClustImpute = derive2 { name="ClustImpute"; version="0.2.4"; sha256="0ss7zsnamh8ir2wpgy6swxck93yr4dd7g7hvyzc1cv6g3k28fb49"; depends=[ClusterR copula dplyr ggplot2 knitr magrittr rlang tidyr]; }; ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; ClustVarLV = derive2 { name="ClustVarLV"; version="2.0.1"; sha256="1wl4kkhf17fi3vgbv0ph0yii2l93cgisxm3s0g9w8zhyn60dwwb0"; depends=[doParallel foreach iterators plyr Rcpp RcppEigen]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.3"; sha256="10i7mnaq968my1c5hi8bdsj05m64wlmrf4n4m118is5h1q7zss8r"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr]; }; ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.1.2"; sha256="1ha50yzc2arlz4c2g7r9w891fk775xfbhz0gky3zxawlsa02213s"; depends=[dplyr magrittr]; }; - ClusterR = derive2 { name="ClusterR"; version="1.2.4"; sha256="01vgr1mpm7l1lyhril5hm1l72aicqc4iwb0b15ypijb6hwkv7g47"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; + ClusterR = derive2 { name="ClusterR"; version="1.2.5"; sha256="1fsb9pzs1paw1cbyr5a56lfh8h2d50232p6isk0xg5sl110ql7kx"; depends=[ggplot2 gmp gtools Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; - Clustering = derive2 { name="Clustering"; version="1.7.2"; sha256="1j8y0ynhlzrsh22cxnmcl0grl6fqx6nx329v5sd3ayam8xdpvjvf"; depends=[advclust amap apcluster cluster ClusterR data_table doParallel dplyr foreach future gama ggplot2 gmp pracma pvclust shiny sqldf xtable]; }; + Clustering = derive2 { name="Clustering"; version="1.7.3"; sha256="18p4ln6crbakqd1yv5zbs1q96d2k85259jhw76mii5di50dw3z21"; depends=[advclust amap apcluster cluster ClusterR data_table doParallel dplyr foreach future ggplot2 gmp pracma pvclust shiny sqldf xtable]; }; CoClust = derive2 { name="CoClust"; version="0.3-2"; sha256="04xv807785xv9kdspsspx1302ardv8gda06kd590lgawjixai7dh"; depends=[copula gtools]; }; CoDiNA = derive2 { name="CoDiNA"; version="1.1.2"; sha256="1zjj86z8ica9j0x2nfyq9y6nyp54w07dwskcsg7z6kqibrkfvaq9"; depends=[data_table igraph magrittr plyr reshape2 visNetwork]; }; CoFRA = derive2 { name="CoFRA"; version="0.1002"; sha256="0ldf84dxaanww3qkf64mz5gv3yv2rjp9m6dy64xckds66vw6x0m3"; depends=[gplots stringr]; }; CoImp = derive2 { name="CoImp"; version="1.0"; sha256="06y722flpiqpwq0p7ik86s09mdnvqw3hdybhdzn8vfns5swc8x1y"; depends=[copula gtools locfit nnet]; }; - CoMiRe = derive2 { name="CoMiRe"; version="0.7"; sha256="19q9qq85xnxlw9zdijmpis83zw98r8spxvb8fsfzp3vyk7hk8gyg"; depends=[ggplot2 gtools KernSmooth mvtnorm NonpModelCheck Rcpp RcppArmadillo rlang splines2 truncnorm]; }; - CoOL = derive2 { name="CoOL"; version="1.0.1"; sha256="19b3g3i4d6rnd46hldvmh9wmfimns3pfi1n7fihgp3cbbwmp8598"; depends=[ClustGeo data_table ggplot2 mltools plyr pROC Rcpp RcppArmadillo wesanderson]; }; + CoOL = derive2 { name="CoOL"; version="1.0.3"; sha256="0iigndir0saxaxw233bfb31if6v9fm95fxxw43bqamfmk6g7b8r4"; depends=[ClustGeo data_table ggplot2 mltools plyr pROC Rcpp RcppArmadillo wesanderson]; }; CoRpower = derive2 { name="CoRpower"; version="1.0.4"; sha256="08chsbbl74rskinp68pwzpvnxx5lkfqf71j7ryp1cwy7199h3jyw"; depends=[osDesign survival]; }; - CoSMoS = derive2 { name="CoSMoS"; version="2.0.0"; sha256="1qnpfipf24szzrmkla7v5dn8g6mrg5x5lqsc6418mm1p795ym3ry"; depends=[animation cowplot data_table directlabels ggplot2 mAr Matrix matrixcalc MBA mvtnorm nloptr plotly pracma]; }; - CoTiMA = derive2 { name="CoTiMA"; version="0.3.9"; sha256="1bmkln7czskr7s4yqjc5nbbj67sggp003dhnmny6b8m8cd6nllb5"; depends=[abind crayon ctsem doParallel foreach lavaan MASS MBESS OpenMx openxlsx psych rootSolve RPushbullet scholar stringi zcurve]; }; + CoSMoS = derive2 { name="CoSMoS"; version="2.1.0"; sha256="149mybfxaqssawp8fqhjiv3xljzflc02y4pfvavz7rklfplidqkb"; depends=[animation cowplot data_table directlabels ggplot2 ggquiver mAr Matrix matrixcalc MBA mvtnorm nloptr plot3D pracma]; }; + CoTiMA = derive2 { name="CoTiMA"; version="0.4.3"; sha256="17hk93ribfi04yxfm70rb3vbk61lax9gxvxbj3dzi6j8ic9ch0fr"; depends=[abind crayon ctsem doParallel foreach lavaan MASS MBESS OpenMx openxlsx psych rootSolve RPushbullet scholar stringi zcurve]; }; CodataGS = derive2 { name="CodataGS"; version="1.43"; sha256="1bjn6s1f5jn64gwrvjz5kvwfkbqrqhavib6dj9k37rb5nzqkwhp6"; depends=[Matrix]; }; CodeDepends = derive2 { name="CodeDepends"; version="0.6.5"; sha256="0l7kiv3awx50glf5cs841b4zzsff1ml90f0zr868ygvwsr4ps1hq"; depends=[codetools graph XML]; }; - CohortPlat = derive2 { name="CohortPlat"; version="1.0.0"; sha256="0n61m88sdkcrgylqsl57rsikfn2r6z95ha2zl3a4l63kcwd3kdsx"; depends=[doParallel dplyr epitools forcats foreach ggplot2 openxlsx plotly purrr tidyr zoo]; }; + CohortPlat = derive2 { name="CohortPlat"; version="1.0.3"; sha256="0na4idcckfqwwynx3kbfyqimzl46pna24aa9xlyjwbczf441gafm"; depends=[doParallel dplyr epitools forcats foreach ggplot2 openxlsx plotly purrr tidyr zoo]; }; CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; Coinprofile = derive2 { name="Coinprofile"; version="0.1.9"; sha256="1bcip62gm34cx5m8a1mx9px2rhgvdmsgnn6q9q40k8p5hw4cx9g0"; depends=[coin exactRankTests ggplot2 plyr Rdpack zoo]; }; CollapseLevels = derive2 { name="CollapseLevels"; version="0.3.0"; sha256="1d2grxh95893j260igh4yh2z3rm3zymlpadqyp6w3na91birazb4"; depends=[dplyr ggplot2 lazyeval magrittr]; }; CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; }; + ColorNameR = derive2 { name="ColorNameR"; version="0.1.0"; sha256="0gqyph3f6mhwg6zwc5bgfglpmg152a4kd2wrmp9jn18wvg8wd03g"; depends=[dplyr magrittr purrr rlang]; }; ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; }; ComICS = derive2 { name="ComICS"; version="1.0.4"; sha256="0brsb7y1bg23sdpxs4j1y3xdgr1q7iinxnnp17rravw72l991xqa"; depends=[glmnet]; }; CombMSC = derive2 { name="CombMSC"; version="1.4.2.1"; sha256="1jxf59hs1px271im2dwc1653y9pfp79gwmacafcva224bvh5vi49"; depends=[]; }; @@ -860,7 +891,7 @@ in with self; { CommonMean_Copula = derive2 { name="CommonMean.Copula"; version="1.0.0"; sha256="0j489hb4vlj3xkdq9vf2qjmcfb8ccff82vsmz63f25ws9pgc2lk2"; depends=[mvtnorm pracma]; }; CommunityCorrelogram = derive2 { name="CommunityCorrelogram"; version="1.0"; sha256="1wkrm5lil595sc4ih3qsf4sgvfipzlav0n7339ixqw9zxm2pg4nj"; depends=[vegan]; }; Comp2ROC = derive2 { name="Comp2ROC"; version="1.1.4"; sha256="06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d"; depends=[boot ROCR]; }; - CompAREdesign = derive2 { name="CompAREdesign"; version="1.7"; sha256="0h2b2n4fkg9894cdmpk0fysynapam476s24h4j60r67nivpzb3vq"; depends=[copula ggplot2 numDeriv rootSolve]; }; + CompAREdesign = derive2 { name="CompAREdesign"; version="1.9"; sha256="0jwq56y6h1jfrh0qm4z52wpia157g1yx003aa08mdjdk0xbdc8n5"; depends=[copula ggplot2 numDeriv rootSolve]; }; CompDist = derive2 { name="CompDist"; version="1.0"; sha256="02c18ksk6clv674yh79bzg3mh9hymzhal51j6g0rnvqd5ra8g66c"; depends=[actuar fExtremes numDeriv PearsonDS rmutil VGAM]; }; CompLognormal = derive2 { name="CompLognormal"; version="3.0"; sha256="1dhgr9l713l2n889bpa47lbg2qab0fz0r15qa928c0b9nz688ddm"; depends=[numDeriv]; }; CompModels = derive2 { name="CompModels"; version="0.2.0"; sha256="058yvwb7p6rj6g1hcwgdzgjv0lwg7m5hgrv1pjfi4dskaibd4k17"; depends=[]; }; @@ -873,8 +904,8 @@ in with self; { ComparisonCR = derive2 { name="ComparisonCR"; version="1.0.4"; sha256="10xw3ppkzpc3njc409ln7g6bg33csf2ilw3f11hn60ry5xbnn82y"; depends=[boot CIFsmry cmprsk]; }; ComparisonSurv = derive2 { name="ComparisonSurv"; version="1.0.9"; sha256="1xvxkj0i59fq05df6szx4k32w2447mxcx3877l2myag4x6i6c74l"; depends=[muhaz survival survRM2 TSHRC]; }; Compind = derive2 { name="Compind"; version="2.2"; sha256="1nl9l3fc7lp2cgwwzkrixpff3jn2vqvhjv4lccrsyz5n5an8hg3m"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; - ComplexUpset = derive2 { name="ComplexUpset"; version="1.2.1"; sha256="1pb4plznb90s85fx2c12k3fgyz4vi0hks3jjgjzcfmdvfj6l676g"; depends=[colorspace ggplot2 patchwork scales]; }; - Compositional = derive2 { name="Compositional"; version="4.6"; sha256="1g6pjs8gfjdyp7iwv0fhq7m8d2ayd6w2pli34fzahl7dwp8fp2rz"; depends=[codalm Directional doParallel emplik FlexDir foreach glmnet MASS mda mixture NlcOptim nnet pchc RANN Rfast Rfast2 sn]; }; + ComplexUpset = derive2 { name="ComplexUpset"; version="1.3.1"; sha256="185bwa45sknhxrg0m1cb7c2jblq6kxq3i9c0jzp3frxc5ybz0737"; depends=[colorspace ggplot2 patchwork scales]; }; + Compositional = derive2 { name="Compositional"; version="4.9"; sha256="0anlqjh4aami9ss3lfzrcf2yq5pqgmq2qj4cz1vq6li5cr9sv7h6"; depends=[codalm Directional doParallel emplik FlexDir foreach glmnet MASS mda mixture NlcOptim nnet pchc RANN Rfast Rfast2 sn]; }; CompoundEvents = derive2 { name="CompoundEvents"; version="0.1.0"; sha256="03shw3016xc41a6by8pnpqs7mmnhs0qmg5aqd4hlfcy3dv2w9wkf"; depends=[]; }; Compounding = derive2 { name="Compounding"; version="1.0.2"; sha256="1xlb3ylwjv70850agir0mx79kcvs43h0n1sm22zcny3509s2r7lf"; depends=[hypergeo]; }; ConConPiWiFun = derive2 { name="ConConPiWiFun"; version="0.4.6.1"; sha256="1ziy646lbx297kia797xjxa8hyl826x1hiighyjslvnlvrhapx08"; depends=[Rcpp]; }; @@ -886,21 +917,25 @@ in with self; { CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; ConfIntVariance = derive2 { name="ConfIntVariance"; version="1.0.2"; sha256="0xm3vh3vmf16faa3934100rnrg4rvlqkgjlsqa2smzcvy5vb86z4"; depends=[]; }; ConfigParser = derive2 { name="ConfigParser"; version="1.0.0"; sha256="0jjh6gz5qcqhirzkmg7a4lnf8n3mjly15x2mvbvdpjkk7iv3w9m3"; depends=[ini R6]; }; + ConformalSmallest = derive2 { name="ConformalSmallest"; version="1.0"; sha256="0r74hbz0dmz69zsw2vdl858vj27p6f2xcpv1l1il4r52cmshg1h8"; depends=[glmnet MASS mvtnorm quantregForest]; }; ConfoundedMeta = derive2 { name="ConfoundedMeta"; version="1.3.0"; sha256="17l6dfff2v0a4p022qclrmkzi78ga9adkgxgrgk9imz0n9m9424d"; depends=[ggplot2 metafor]; }; + ConfusionTableR = derive2 { name="ConfusionTableR"; version="1.0.1"; sha256="07v0flmcq36lmcqmq0farhy21mwad9nz4hhsgl9fn96psshk6kdn"; depends=[caret dplyr e1071 ggplot2 lattice magrittr mlbench randomForest scales tibble tidyr]; }; CongreveLamsdell2016 = derive2 { name="CongreveLamsdell2016"; version="1.0.2"; sha256="0fs0r3k1hvnp241fa0ymq00868skcigizqr68sp3lsmvzsdyxha9"; depends=[Ternary]; }; Conigrave = derive2 { name="Conigrave"; version="0.4.4"; sha256="02nvk5ya9gr06ai8qnjw0xq6hfbrr91b6lx9gq08dbrnmpbmyvqz"; depends=[dplyr ggplot2 miceadds mitools ppcor stringdist stringr]; }; ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.5"; sha256="082y4xxnp42xa7db5hnbc9qlvkb50wwb3wzi0my04l55a9s0ril7"; depends=[]; }; ConsRank = derive2 { name="ConsRank"; version="2.1.1"; sha256="1yzq0fs0b0sxnm177xia57bcnpgc57x7y8anccp1qh18qkffnb87"; depends=[gtools proxy rgl rlist]; }; + ConsRankClass = derive2 { name="ConsRankClass"; version="1.0.0"; sha256="025wpyz2bjzgms2fbfn129b1w6qcbdxpbp1a07g36xb82bsp6i79"; depends=[ConsRank janitor pracma proxy rlist]; }; ConsReg = derive2 { name="ConsReg"; version="0.1.0"; sha256="0ck188ahzprzvqdh2q05bcg9b68dw3xiqqb1xirbm4rp5chyr419"; depends=[adaptMCMC data_table DEoptim dfoptim FME forecast GA GenSA ggplot2 MCMCpack Metrics nloptr Rcpp rlang Rsolnp]; }; ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.4.1"; sha256="157lnlv0idcasi8y31zk9864kdqrlcl409gza4jx5k131qlp2san"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.1"; sha256="00p5bdiq8hj95lkr86iwyh50qw0d0d4gs9hhbzcix6lwn8dwqd3s"; depends=[]; }; ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="2.2.1"; sha256="0mn0lnycz5pi821q52g1njjs2pcmvv8yynr13bh237c8cashk2n3"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.2"; sha256="1pvcl0bgd4anrbn6wqxsd1s23ycsc7jhrk94yzwx67xx0qs9mmrw"; depends=[lattice tkrplot]; }; Convolutioner = derive2 { name="Convolutioner"; version="0.1.0"; sha256="1ria4ii7zdqgrzgdx4c82dj4lg791iwy2y66fv1qyibws0ag3bhq"; depends=[]; }; - CoopGame = derive2 { name="CoopGame"; version="0.2.1"; sha256="1c11b5l6r5csa6zw5a6lfqaygzhnp5jfdf0vkrxpl7fb4bbxhm31"; depends=[geometry gtools rcdd rgl]; }; + CoopGame = derive2 { name="CoopGame"; version="0.2.2"; sha256="0i4yw2nznmcps9s9f592nbs8dvncb0w2bynvsfkp21lzd4pfsp4n"; depends=[geometry gtools rcdd]; }; CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="2.0-18"; sha256="0gdvna1a43p419hrs78afas9w7xhiqaqr4yivbkjms3l9cr5zb87"; depends=[dplyr geosphere ggplot2 raster rgbif rgdal rgeos rnaturalearth sp tidyselect]; }; CopCTS = derive2 { name="CopCTS"; version="1.0.0"; sha256="1j0bhkjk181y9k69442diswgwax5whmh5vfqydhf3b1r5ll1wkm3"; depends=[copBasic copula msm]; }; + CopernicusDEM = derive2 { name="CopernicusDEM"; version="1.0.1"; sha256="0pf3y335agfkdnxjyfcfkbrk2999p5h0by959ahc1wxyrxdghxsl"; depends=[doParallel foreach gdalUtils glue sf]; }; Copula_Markov = derive2 { name="Copula.Markov"; version="2.8"; sha256="0wyb80jj9zgh7kn0nah7dljps72083c92hpds94dw4ccmw6cfwf6"; depends=[]; }; Copula_Markov_survival = derive2 { name="Copula.Markov.survival"; version="1.0.0"; sha256="1sxg0ir39f4hj4m6imija0c88j513j6fflcp7xc0599iglwsrbvs"; depends=[survival]; }; Copula_surv = derive2 { name="Copula.surv"; version="1.1"; sha256="1zs2jvb07948g2aspy8877j4hdzavd57lmv4x2yrf6gb4xzs3x3n"; depends=[]; }; @@ -912,7 +947,6 @@ in with self; { CorDiff = derive2 { name="CorDiff"; version="1.0"; sha256="12rgfhygrdq1ign4ybr8g171wxic8zbp83n1xdsnqpj910k5jdr5"; depends=[mcc]; }; Corbi = derive2 { name="Corbi"; version="0.6-1"; sha256="0ig0rx4llkgqvg2sx6xmzhh9sjgy4qnw22xs84gxgqidi50f2a85"; depends=[CRF igraph MASS Matrix]; }; CornerstoneR = derive2 { name="CornerstoneR"; version="2.0.2"; sha256="04dvryhcyi7f6bmm4067cn5vmy7kdqi3bys7ln8nnsc0kkdjxhi5"; depends=[checkmate data_table minpack_lm ranger SpatialTools vcd]; }; - CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.6"; sha256="0iwad5qf7hqii02s5f85155c5s7v8ghnac4l6l3c45dshrpapp2m"; depends=[boot combinat dirmult geepack mvtnorm]; }; CorrMixed = derive2 { name="CorrMixed"; version="1.0"; sha256="0rj987k8pzsw9n9a20ky23rwc3zyqsl0fcibpmry7p8pw2miaj0z"; depends=[nlme psych]; }; CorrToolBox = derive2 { name="CorrToolBox"; version="1.6.3"; sha256="1mvw23f411vcmjq8lz4jx559ix8iz1c9zaynpkaviqz007amh6wa"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; @@ -925,7 +959,7 @@ in with self; { CovCombR = derive2 { name="CovCombR"; version="1.0"; sha256="07yd0zbvc9db2jw6xigfhxnbkxwb3gxlmywadz7fs3rva2if2ffx"; depends=[CholWishart Matrix nlme]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; - CovTools = derive2 { name="CovTools"; version="0.5.3"; sha256="0r3q97zl72v7i1d9nhxgsilqczihhfq6zzhl4cmz8rbk3b7c7qrc"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes SHT]; }; + CovTools = derive2 { name="CovTools"; version="0.5.4"; sha256="1bkqg3kzy2ahjqldcf6x55wkrmb4s6y72y9cj0jwb1fph0a1p3sm"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes SHT]; }; CovidMutations = derive2 { name="CovidMutations"; version="0.1.3"; sha256="03bl9frjfj8i7ydgi245113yzyg8rkgqxasicmqcjdd68zbz00kn"; depends=[cowplot dplyr ggplot2 ggpubr seqinr stringr VennDiagram]; }; CoxICPen = derive2 { name="CoxICPen"; version="1.1.0"; sha256="0m6g4gi33y5vmpf790x38y8g8vpxvr5935lcz9vjw5kkmsjkln0g"; depends=[foreach]; }; CoxPhLb = derive2 { name="CoxPhLb"; version="1.2.0"; sha256="0jlh2k5ygj896sfx7dcw5qlb80bl64rsvqfayv0c6a107bmrzsw4"; depends=[survival]; }; @@ -938,31 +972,33 @@ in with self; { CreditRisk = derive2 { name="CreditRisk"; version="0.1.3"; sha256="09ks8xlsrbp3an1drcwmmd6df4fsfz61z21ma2p62a1pk0bnc86c"; depends=[fOptions]; }; Cronbach = derive2 { name="Cronbach"; version="0.1"; sha256="1gkapi7pgf1mwidhgdf3y5cm4bz5igzb7mdflz560aa67asp1qyf"; depends=[boot]; }; CropDetectR = derive2 { name="CropDetectR"; version="0.0.1"; sha256="14sabqld94if7f2m39bh6652cb62hcwx53k8q5k23anzzsn93qlj"; depends=[dplyr EBImage imager reshape2]; }; - CropScapeR = derive2 { name="CropScapeR"; version="1.1.2"; sha256="1d2pyr0p7m7yw7n4ghvyxs2cwxyrpgc4238ma8fy8f29dfp7mnbq"; depends=[data_table dplyr httr magrittr raster RJSONIO sf]; }; - CrossVA = derive2 { name="CrossVA"; version="0.10.0"; sha256="08mq8d6la5gz3yv5a3lc70dxdgf29q1vngi8lrgdy58p9415pxjv"; depends=[stringi]; }; + CropScapeR = derive2 { name="CropScapeR"; version="1.1.3"; sha256="1k09ish6a7wjsa9w5vcvsc8inrbzap0hhx4qjrf5wbniqnv3hgl8"; depends=[data_table dplyr httr magrittr raster RJSONIO sf]; }; + CrossVA = derive2 { name="CrossVA"; version="1.0.0"; sha256="16ahw8h27acvqqixmwmsyl6rbjzxbn4pfyh2ls9rq852mc7mdg9b"; depends=[stringi]; }; CrossValidate = derive2 { name="CrossValidate"; version="2.3.4"; sha256="1q5wnw2llvlw3hbjg0zccipk3ns31m2339x1aj6m526zhvgl2wvx"; depends=[Modeler oompaBase]; }; Crossover = derive2 { name="Crossover"; version="0.1-20"; sha256="1mm8zc845v077rnhijammpq72dsm9smwiixr0iygcadb5vbkfpib"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; - CruzPlot = derive2 { name="CruzPlot"; version="1.4.5"; sha256="1vazhf82k93rc884idq6af1g8bw47id11jq4z0c10ybs95dgjbxj"; depends=[dplyr DT geosphere mapdata maps marmap shiny shinydashboard shinyjs stringr swfscDAS]; }; + CruzPlot = derive2 { name="CruzPlot"; version="1.4.6"; sha256="12q0cs11kkpb6p5msjalffx8ni4qx9fw4kj8zjm9n446xx53yb4k"; depends=[dplyr DT geosphere mapdata maps marmap shiny shinydashboard shinyjs stringr swfscDAS]; }; CrypticIBDcheck = derive2 { name="CrypticIBDcheck"; version="0.3-3"; sha256="1c7n020i9lxp0fam05k9v4az4rvx8fakhzi9fkma82smpl709x8q"; depends=[car chopsticks ellipse rJPSGCS]; }; CsChange = derive2 { name="CsChange"; version="0.1.6"; sha256="0ahgzir1rz5hh2jkgabp9vccg527vbvmkdyxf9lyz5yxkig3jv2s"; depends=[boot Hmisc rms survival]; }; - Cubist = derive2 { name="Cubist"; version="0.2.3"; sha256="1x71n72n12alyl7d9vdf3xb3ks14lql4pxxxnimk2gq7brc5z10r"; depends=[lattice reshape2]; }; + Cubist = derive2 { name="Cubist"; version="0.3.0"; sha256="0qxjkv7lswzg5j3cwfbva64xh0a2a2iycz59ff59g3lahmznx9w8"; depends=[lattice reshape2]; }; CustomerScoringMetrics = derive2 { name="CustomerScoringMetrics"; version="1.0.0"; sha256="166v0hbxy4xgbfqh7sx6zsrv4pghqpimx5xry3h2qwynnvr4ng1a"; depends=[]; }; CustosAscensor = derive2 { name="CustosAscensor"; version="0.1.0"; sha256="1axyhwf9rc9dvrrcrpmx69kp49nwb0an7csn9qbjmx9jwwav11l5"; depends=[]; }; CutpointsOEHR = derive2 { name="CutpointsOEHR"; version="0.1.2"; sha256="0r772zb7g10akcfnf2hnyvpvba4px9pgslyns7drmijdsh0ncnvj"; depends=[survival]; }; - Cyclops = derive2 { name="Cyclops"; version="3.1.1"; sha256="05nzf2i442xqmimafra95f9cwkj2xi27h7pki5fj3wng7ysyp1fa"; depends=[Andromeda BH bit64 dplyr Matrix Rcpp RcppEigen rlang survival]; }; + Cyclops = derive2 { name="Cyclops"; version="3.1.2"; sha256="13nwcksfxvjz2wh7dr500y0xy69hfl4k0ddsr6m24qh2km8spp6n"; depends=[Andromeda BH bit64 dplyr Matrix Rcpp RcppEigen rlang survival]; }; CytobankAPI = derive2 { name="CytobankAPI"; version="1.3.0"; sha256="1rrqhsqv5xc58dvkrbs9c83pkqz5np59shm7xjmqxdjj2rxj8zqn"; depends=[curl httr jsonlite]; }; CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="2.0"; sha256="0xczcgaxd8dv6fd1j5c8y4il852lq8859d1y16sxs8a3gqn9fbz2"; depends=[CytobankAPI pheatmap shiny shinyFiles xlsx]; }; CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; }; + D2MCS = derive2 { name="D2MCS"; version="1.0.0"; sha256="14c02p9shfhvpafvm10xpy2r5x1h2pqrbj07dnz7pviqndxjp7ma"; depends=[caret devtools dplyr FSelector ggplot2 ggrepel gridExtra infotheo mccr mltools ModelMetrics questionr R6 recipes tictoc varhandle]; }; D3GB = derive2 { name="D3GB"; version="1.1"; sha256="1r4hxx2qdws7c7hsnswzfh6az8mn720sk8nygilljl2ghnwpq7pa"; depends=[DBI RSQLite]; }; D3partitionR = derive2 { name="D3partitionR"; version="0.5.0"; sha256="10067rdgbpjzgw2wiq75kdd0gd7bl41hp16sxc0k2p72ybqfpw03"; depends=[data_table functional htmlwidgets magrittr RColorBrewer titanic]; }; + DA = derive2 { name="DA"; version="1.2.0"; sha256="0bcx6lh93yl1cawrbrkqx7dypypvfnf27nlxf9vkz16n1hy50xnl"; depends=[adegenet kernlab klaR lfda MASS plotly rARPACK]; }; DAAG = derive2 { name="DAAG"; version="1.24"; sha256="09fxd21p7v9mpy9s876n1jyc3l7w7s3vs5iglc3xphqbffgzfnvs"; depends=[lattice latticeExtra]; }; DAAGbio = derive2 { name="DAAGbio"; version="0.63-3"; sha256="0n82d9nsvpl6cwp95by8ff9fmdafs2fdi603dlik5890adaw42x4"; depends=[limma]; }; DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; }; DAIME = derive2 { name="DAIME"; version="2.1.3"; sha256="099pbzgryz9lxhcqlrywcv8zl5af4ir5dyyqvgc16xi5bddxk7ld"; depends=[]; }; DAISIE = derive2 { name="DAISIE"; version="3.0.1"; sha256="10b55m4ycb07l0mfjx58zfmckk627arj575p9via6kr7lp1c3j59"; depends=[DDD deSolve doParallel foreach magrittr Matrix pracma subplex tensor testit]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="2.2.0"; sha256="1qnjbhilv4jfmwqxfi9xc5ysrh8gr84a2a5imjfci7d1n3zcnryn"; depends=[ggplot2 iBreakDown ingredients]; }; - DALEXtra = derive2 { name="DALEXtra"; version="2.0"; sha256="1fbl0idvvhpqn6qiw6pn426n1dvf0hdi228nkr23f2d08rgfbsxh"; depends=[DALEX ggplot2 gridExtra reticulate]; }; + DALEX = derive2 { name="DALEX"; version="2.3.0"; sha256="0x8rcl3p1h1dpzgsfnalfjhvv345gg5v0z8dxqwrk6i32xk5wmzb"; depends=[ggplot2 iBreakDown ingredients]; }; + DALEXtra = derive2 { name="DALEXtra"; version="2.1.1"; sha256="1xqqisrqal0spzkbc1x5rj3xpycfqj4g87wc3nl2j76frj8mnmdy"; depends=[DALEX ggplot2 reticulate]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="2.3"; sha256="0pk9gq82qa18fl7zp74d47bgy8lhj9rkvfq23w8844nz9kn58s1f"; depends=[ape caper DDD deSolve expm Hmisc Matrix matrixStats picante]; }; DAMisc = derive2 { name="DAMisc"; version="1.6.2"; sha256="0arazw6pjgd9xgsdnyz8ccwyrpakyqzraw6j08zlrnn6hv7p29mr"; depends=[AICcmodavg boot car clarkeTest coda dplyr DT effects gamlss ggplot2 glue haven janitor jtools lattice latticeExtra magrittr MASS nnet optiscale rlang rstan survey tibble tidyr tidyselect xtable]; }; @@ -970,27 +1006,29 @@ in with self; { DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; DBI = derive2 { name="DBI"; version="1.1.1"; sha256="0i0kfyg43nryyka2bjlgz4x75w965224qp36wz1hl7a2lswb6ajp"; depends=[]; }; - DBItest = derive2 { name="DBItest"; version="1.7.0"; sha256="10fvij1bz3pvqqrg0s55x7bfgxh7nrnnjaxp8cwpk3wkp3c77pi5"; depends=[blob callr DBI desc hms lubridate R6 rlang testthat withr]; }; + DBItest = derive2 { name="DBItest"; version="1.7.1"; sha256="0ql6n0alywfg7pcynbyzjj1ybv0c3jq6v9qf4qgylmdj8nq83zmz"; depends=[blob callr DBI desc hms lubridate R6 rlang testthat vctrs withr]; }; DBfit = derive2 { name="DBfit"; version="2.0"; sha256="1b5fy4xya5k31937ccjsq1gj9y39lh1vb48jfc0sr56isrx0c496"; depends=[Rfit]; }; DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCCA = derive2 { name="DCCA"; version="0.1.1"; sha256="06xdx79r7dr14dlk5vgcyd8ar4sc72imlyk66bnia1kvlynvdy69"; depends=[checkmate]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; DCEM = derive2 { name="DCEM"; version="2.0.4"; sha256="1g4c7h02rv467sgvjv19s0w4xcm11mwfamfs3sdy44ra9dgaf1af"; depends=[MASS matrixcalc mvtnorm Rcpp]; }; - DCEtool = derive2 { name="DCEtool"; version="0.0.1"; sha256="0gvnxijxa46kgis0f8kq7hlfrr7k14jbcw421ajdjca41mqr43av"; depends=[DT idefix MASS shiny shinyjs shinythemes survival writexl]; }; + DCEtool = derive2 { name="DCEtool"; version="0.3.1"; sha256="05pmdd5ryv0jyqkqknjb33lvfcv4vqfqw46q231l5ixxcwapfvxr"; depends=[bslib commonmark DT htmltools idefix MASS mlogit readxl shiny shinycssloaders shinyglide shinyhelper shinyjs shinythemes stringr survival writexl]; }; DCG = derive2 { name="DCG"; version="0.9.3"; sha256="08718x6v3g7kpfv0gpgm19cn3d3ynj7yagzs0jic1j5rwvn04pfb"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; + DCLEAR = derive2 { name="DCLEAR"; version="1.0.8"; sha256="1riqsrzx9liq9fq9b4bfyfkixq879rzwa2yl202if8py42k1rnk5"; depends=[ape BiocGenerics BiocParallel dplyr igraph Matrix matrixStats phangorn purrr rBayesianOptimization Rcpp RcppArmadillo rlang stringr tidyr tidyverse]; }; DCODE = derive2 { name="DCODE"; version="1.0"; sha256="19dwms88q0ylxd92l3ivig8p8jjyhk8mhgz0l36m9pcq11gyjc0n"; depends=[seqinr]; }; DCPO = derive2 { name="DCPO"; version="0.5.3"; sha256="1h14xnii6kv6sc7pfxalif3bj0mifnxg46x4lwbixx9vzxxz96sq"; depends=[beepr BH dplyr forcats janitor purrr Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; - DCchoice = derive2 { name="DCchoice"; version="0.0.17"; sha256="0bhnhrwq54kksaqazz18hsy2x63876rj02d1q62by6vpxb5k0k9w"; depends=[Formula interval MASS]; }; + DCSmooth = derive2 { name="DCSmooth"; version="1.0.2"; sha256="0i2vf1d0kgi4i4yb1r6bis7mgh1vjqxj3msyrpvjz9iylywlg9vx"; depends=[astsa plotly Rcpp RcppArmadillo]; }; + DCchoice = derive2 { name="DCchoice"; version="0.1.0"; sha256="0vfnw856ff0p6wrhv991sjcl65p40200p4k0xl3w4sdv5017xszz"; depends=[Formula interval MASS]; }; DChaos = derive2 { name="DChaos"; version="0.1-6"; sha256="0g1ld6big26gpj4p6dz0ncchqyspb73a8wd6h900b98hg32zidg6"; depends=[nnet outliers pracma sandwich xts zoo]; }; DCluster = derive2 { name="DCluster"; version="0.2-7"; sha256="008nyry64s5g80narcc58273v0jhqzfgwynka6mh7jgi7qsqnxjd"; depends=[boot MASS spdep]; }; DClusterm = derive2 { name="DClusterm"; version="1.0-1"; sha256="04i9fyph2k3ffds0nv49371p8lw6dkzcf27pc98f99x0l6c8k5iq"; depends=[DCluster lme4 sp spacetime xts]; }; - DDD = derive2 { name="DDD"; version="4.4.1"; sha256="0ks0ybk3shnqjyzk304nm2jdhqkdzshbg0qyrhn93ajbaw6dm34b"; depends=[ape deSolve expm Matrix phytools SparseM subplex]; }; + DDD = derive2 { name="DDD"; version="5.0"; sha256="13kqgj45afd0c5jkwi36j94v7l2bz60i3583z1jcvdxq913wwv5b"; depends=[ape BH deSolve expm Matrix phytools Rcpp SparseM subplex]; }; DDHFm = derive2 { name="DDHFm"; version="1.1.2"; sha256="0lgh6kcfas06p2yy7zy21r05k5521xbj5af3wwwssp5li1cia35g"; depends=[lokern wavethresh]; }; - DDIwR = derive2 { name="DDIwR"; version="0.5"; sha256="0q4dyyzpqj2a63yccal8nwvg176b7dv8phnhqnb2rppdgkikxdfh"; depends=[admisc haven readr tibble xml2]; }; + DDIwR = derive2 { name="DDIwR"; version="0.8"; sha256="1lwzbw10akvwpzmygx0j664krrcd0jxrja3achcdc7yijnkhv9cf"; depends=[admisc declared haven readr readxl writexl xml2]; }; DDM = derive2 { name="DDM"; version="1.0-0"; sha256="19g06qk3lzasj294x9wfij729mlq6ryvjqkn3rgl5xp1w0gx9wi2"; depends=[]; }; - DDPNA = derive2 { name="DDPNA"; version="0.2.7"; sha256="18s6g1r52gjk20yyqfx01nmh98zswpc6lwhg5w3rnhf9fj7310zg"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; + DDPNA = derive2 { name="DDPNA"; version="0.3.0"; sha256="1mgk2jf7h9qnmy85dfymskwihdk0dw74ydrgrf2sfj6xpslnavi2"; depends=[ggalt ggplot2 Hmisc igraph MEGENA plyr scales VennDiagram]; }; DDRTree = derive2 { name="DDRTree"; version="0.1.5"; sha256="16s5fjw7kwlxhrkzdny62sx32fvmg3rxjc3wrh6krd31jh1fqlfk"; depends=[BH irlba Rcpp RcppEigen]; }; DDoutlier = derive2 { name="DDoutlier"; version="0.1.0"; sha256="1az5zq0l3kj959572mlpc4zl73f16iag0yrs217fa9m8xpd3c2sd"; depends=[dbscan pracma proxy]; }; DECIDE = derive2 { name="DECIDE"; version="1.2"; sha256="18kn2pm9r0ims2k1jfsfzh258wwxz0xg86rsbwgq6szh0azlq3qy"; depends=[]; }; @@ -1002,86 +1040,88 @@ in with self; { DES = derive2 { name="DES"; version="1.0.0"; sha256="16p38i8ykwc8gjw6c9dhdwjjpa1b17n9wqhz3rhkbzjh978pky31"; depends=[]; }; DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; DET = derive2 { name="DET"; version="3.0.1"; sha256="0r2q1r4wc4nhhrr9bllxsp2w6ajja61mh34dyijjsfchx4025ljb"; depends=[doParallel pROC]; }; - DEoptim = derive2 { name="DEoptim"; version="2.2-5"; sha256="0nlm2gdvd33yrwambmlrgj76inxz2a65ya7727l98fd4skfdw4mf"; depends=[]; }; - DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; - DEploid = derive2 { name="DEploid"; version="0.5.3"; sha256="0k5bcpfwf9fhkv0wp6s1nvp4l6xgwmdbz3l8mmiy8q1ym7gpvwml"; depends=[htmlwidgets magrittr plotly Rcpp rmarkdown scales]; }; + DEoptim = derive2 { name="DEoptim"; version="2.2-6"; sha256="1qg2d4d076a99qdjfg0yyq5z1xc1zlwydwry00nj2rx0hdykjqwc"; depends=[]; }; + DEoptimR = derive2 { name="DEoptimR"; version="1.0-9"; sha256="04k5gi0a5hbm6znzvjaipbmkacp694krkqs38dkbxx1gymsallb1"; depends=[]; }; DFA = derive2 { name="DFA"; version="0.9.0"; sha256="0nk8k6xxqbbk1zhq3xsm59azvkj9499vp92pjl9xygasarim90rl"; depends=[]; }; - DFA_CANCOR = derive2 { name="DFA.CANCOR"; version="0.2.0"; sha256="1kfnqg281cdws7gqn5s0klcvdc505d0y1chab2925wdihib7m2w4"; depends=[MASS MVN]; }; - DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; + DFA_CANCOR = derive2 { name="DFA.CANCOR"; version="0.2.1"; sha256="0hbdvwb70s5r7lwfb21q5c2asqaqx2iciamppf4q9gz3m33kc9ql"; depends=[MASS MVN]; }; + DFIT = derive2 { name="DFIT"; version="1.1"; sha256="1220ax93b9xwmq1crgl1fnf63gk72jqbra5b5q25wn6ynv1kilkx"; depends=[ggplot2 mirt msm mvtnorm simex]; }; DGCA = derive2 { name="DGCA"; version="1.0.2"; sha256="0k2a24ycagyxdx54dh9w8km25xhmmmhyyl26g76z4g5gqvcw092k"; depends=[matrixStats WGCNA]; }; DGEobj = derive2 { name="DGEobj"; version="1.0.3"; sha256="0n2i6y2vhhypn3sgsysvfpxdfvhb3fq7pz2lv71bnn1fz3lghbsx"; depends=[assertthat GenomicRanges magrittr stringr]; }; DGEobj_utils = derive2 { name="DGEobj.utils"; version="1.0.3"; sha256="03h4ywzlidy0jzxxwgkzahz99856lhv25y9mvgsb0alh20c8x81j"; depends=[assertthat DGEobj dplyr edgeR IHW limma qvalue RNASeqPower statmod stringr sva tidyr zFPKM]; }; DGLMExtPois = derive2 { name="DGLMExtPois"; version="0.1.3"; sha256="1prsnkkhb61y01flxz57875a9arvyy2qxjl0lz5ajpmf8dhr08j8"; depends=[COMPoissonReg nloptr progress]; }; - DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; - DHARMa = derive2 { name="DHARMa"; version="0.4.1"; sha256="1dqcq9hh7l61ym7354wz6vva6aymx37cp9z77ypn7n6lfj0w0cgh"; depends=[ape doParallel foreach gap lme4 lmtest qgam]; }; + DGM = derive2 { name="DGM"; version="1.7.3"; sha256="15dv56bh3fwxfam1smhjgwg0vzqq4c92gxwrhfz11frzh14gx7n8"; depends=[coin data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; + DHARMa = derive2 { name="DHARMa"; version="0.4.3"; sha256="0wp2y0zpgb3sh7j76f2yd7gwvpyrd9la1nz2jfrrvi7zh10lj34f"; depends=[ape doParallel foreach gap lme4 lmtest qgam]; }; DHBins = derive2 { name="DHBins"; version="1.1"; sha256="1g69acac7pxw8x0d9czyds7xljhbv9d686c99a3y8b4vh7dnx62s"; depends=[ggplot2]; }; - DHS_rates = derive2 { name="DHS.rates"; version="0.8.0"; sha256="1mq4hqkghp6nk7jjwp9hfd81mjxrnkl4dvafd0vgav4yb8mhq8c2"; depends=[crayon dplyr haven matrixStats reshape rlang survey]; }; - DICOMread = derive2 { name="DICOMread"; version="0.0.0.2"; sha256="0b78057did8ww4hyfy33ly6b9f7lzpiwjzdm7mjfd4gkfilmvh0j"; depends=[matlabr]; }; + DHS_rates = derive2 { name="DHS.rates"; version="0.9.0"; sha256="1a8k68cd7x8gdra1bjk750jjy8p4wnbgmbw7wg14yi95kxyry3az"; depends=[crayon dplyr haven matrixStats reshape rlang survey]; }; + DICOMread = derive2 { name="DICOMread"; version="0.0.0.3"; sha256="1wrgx5b9w476g8s3jmccc027xdqbmcmnlhwf02g6j213rgy87p73"; depends=[matlabr]; }; DIDmultiplegt = derive2 { name="DIDmultiplegt"; version="0.1.0"; sha256="1jzc2ixb92mxlm39xf3rmab9c8959xylnxacr4xqjnhi9hlkq30n"; depends=[assertthat dplyr fixest plotrix sampling stringr]; }; DIFboost = derive2 { name="DIFboost"; version="0.3"; sha256="07x31ccy2l0drv1356g1v4jw71i7zqb3d0v856gsd3kpqhclpvx0"; depends=[mboost penalized stabs]; }; DIFlasso = derive2 { name="DIFlasso"; version="1.0-4"; sha256="13ls5018l790cdr26431li4gi9zw03ilypszfqglg4hj485h7dyw"; depends=[grplasso miscTools penalized]; }; DIFplus = derive2 { name="DIFplus"; version="1.1"; sha256="1k03lr437gx5y762z3h40hz9kcl4m8xgrndxvbyvsgmn2h6pbwsd"; depends=[plyr TestDataImputation]; }; DIFshiny = derive2 { name="DIFshiny"; version="0.1.0"; sha256="0lb98dj2kidfv8zqs1rdkj7b6gf6i4d2s904bwsbyg7w03jxm86f"; depends=[difR readxl shiny shinydashboard]; }; DIFtree = derive2 { name="DIFtree"; version="3.1.6"; sha256="1ps3nb1a5dgxs187bcjsys4fpi0z4z6d84qlxg8rf1rvcfgg21r5"; depends=[gridBase penalized plotrix VGAM]; }; + DIGSS = derive2 { name="DIGSS"; version="1.0.2"; sha256="1bbwkq40gdan1zwq3cwn96k0k045x67l11rhm3q4dppw50736fpk"; depends=[ggplot2 viridis]; }; DIME = derive2 { name="DIME"; version="1.2"; sha256="11l6mk6i3kqphrnq4iwk4b0ridbbpg2pr4pyqaqbsb06ng899xw0"; depends=[]; }; DIMORA = derive2 { name="DIMORA"; version="0.2.0"; sha256="1ig2h2v199r5ryia35fx2540px7n2qshpma73599l82dr7k9hb33"; depends=[deSolve forecast minpack_lm numDeriv reshape2]; }; DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; - DIZutils = derive2 { name="DIZutils"; version="0.0.7"; sha256="03q3cnsska9dhskjnv090vczlnxhwh73ghjwp2pwb1pfbba71vxd"; depends=[config data_table DBI Hmisc psych rapportools RJDBC RJSONIO RPostgres shiny shinyjs xml2]; }; + DIZutils = derive2 { name="DIZutils"; version="0.0.8"; sha256="1lyg9d54pi3ijcl7jmh75vaf80la808fj39l7k3hcniqb2l22hvq"; depends=[config data_table DBI Hmisc parsedate psych rapportools RJDBC RJSONIO RPostgres shiny shinyjs xml2]; }; DIconvex = derive2 { name="DIconvex"; version="1.0.0"; sha256="0bnrq9nmryshir6ll43nz20aaqmmw0zjvfml72cpwbvrma8a3qmz"; depends=[lpSolveAPI]; }; - DImodels = derive2 { name="DImodels"; version="1.0"; sha256="1kgnfcw386x19vmzhhir907rjvfz15rlrs6xa8ph2w95j5ai4pf0"; depends=[hnp rootSolve]; }; + DImodels = derive2 { name="DImodels"; version="1.1"; sha256="0767xanj4dck6hxx392fcavwsjz8d30wymxnabr5v8s7pcsmv18p"; depends=[hnp rootSolve]; }; DIscBIO = derive2 { name="DIscBIO"; version="1.2.0"; sha256="1m1c9ivblk3sir6lfq0msx2vlrx37dd5v7y6003k6fmsgrfpi9fs"; depends=[AnnotationDbi boot cluster fpc ggplot2 httr igraph impute mclust NetIndices org_Hs_eg_db philentropy png RColorBrewer rpart rpart_plot RWeka SingleCellExperiment statmod TSCAN tsne]; }; - DJL = derive2 { name="DJL"; version="3.6"; sha256="1drfqzla0lqlch21bvyjq5qjwm75c6rggpsc92p4dw5vwzs3p8lj"; depends=[car lpSolveAPI]; }; + DJL = derive2 { name="DJL"; version="3.7"; sha256="0j8535gdn5h1rjc357w30sdmarmm9sx9n62fiji191wpk1mm1dmh"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; - DLMtool = derive2 { name="DLMtool"; version="6.0.1"; sha256="1ycphavrbr8x1r6ipdjl4nhr0i4sii55cmn0kmjmv4b9lh93vj01"; depends=[dplyr ggplot2 MSEtool Rcpp]; }; - DMCfun = derive2 { name="DMCfun"; version="1.3.0"; sha256="1ryj8djbd2vw046jjd6anva6l0jk73ip46l17bqxfmmgq4ryd99c"; depends=[BH DEoptim dplyr optimr pbapply Rcpp tidyr]; }; - DMLLZU = derive2 { name="DMLLZU"; version="0.1.0"; sha256="13lsdv2q0l7y9pddg23x6ihlgp032jjaxbhv2js5fnbx96nnarw3"; depends=[caret gbm ISLR lmtest nnet randomForest rlang sandwich]; }; + DLMtool = derive2 { name="DLMtool"; version="6.0.3"; sha256="00gh4di7ngn56v5hy7l5ybj6zg71fxaqyp1chmz22arb7rvj4q08"; depends=[dplyr ggplot2 MSEtool Rcpp]; }; + DMCfun = derive2 { name="DMCfun"; version="2.0.0"; sha256="130j380sqy8p0yiw0x3ax3krh0n178bad1v1y9rsg6i973m654am"; depends=[BH DEoptim dplyr pbapply Rcpp shiny tidyr]; }; + DMLLZU = derive2 { name="DMLLZU"; version="0.1.1"; sha256="0ck87abcd5gkq69q1g5g0yshfhx94m3vgayvxgzgnkidn9mivx22"; depends=[caret gbm ISLR lmtest nnet randomForest rlang sandwich]; }; DMMF = derive2 { name="DMMF"; version="0.5.1.2"; sha256="0p82cfp0561j4ki20rznx46z7vqdxh128a0m0zj8d2wp3csn1aag"; depends=[raster rgdal sp]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; DMRnet = derive2 { name="DMRnet"; version="0.2.0"; sha256="1rbba8w4li240gw5z675d7skm72rh0zxzp4rhsn6ivj72jya7jw4"; depends=[glmnet grpreg]; }; DMTL = derive2 { name="DMTL"; version="0.1.2"; sha256="0z6l1sylw4ib1mgqjnrmxh2q56vazg2i7xxiw1g4gm28iq44r2n0"; depends=[caret glmnet kernlab ks randomForest]; }; + DMtest = derive2 { name="DMtest"; version="1.0.0"; sha256="1bziiyv63lcbmd79fykjj6b63igbbw0pwiq37k7q9l5vij6jfcj9"; depends=[doParallel foreach matrixStats]; }; DMwR2 = derive2 { name="DMwR2"; version="0.0.2"; sha256="1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9"; depends=[class DBI dplyr quantmod readr rpart xts zoo]; }; DNAseqtest = derive2 { name="DNAseqtest"; version="1.0"; sha256="1mpmf40vrpw8m75rlqchsnyrz12pgg5bkz7wfca5yy5sbbiwk5pf"; depends=[]; }; DNAtools = derive2 { name="DNAtools"; version="0.2-3"; sha256="10j95g9jqr7jk9ph9j3i2yblkmp4v4py8vq70rv7q56cv7dq7z32"; depends=[multicool Rcpp RcppParallel RcppProgress Rsolnp]; }; DNLC = derive2 { name="DNLC"; version="1.0.0"; sha256="05410xgpfjsydjmnzry454qcjpws9vhh252q2xq7l0scdj87ly00"; depends=[caTools fdrtool GOstats igraph locfdr mvtnorm spdep]; }; DNMF = derive2 { name="DNMF"; version="1.3"; sha256="09yp6x6vd44ahklcag96fpjgyphyn45rkqkbwr1n36a2d8vxk9nc"; depends=[doParallel foreach gplots Matrix]; }; DOBAD = derive2 { name="DOBAD"; version="1.0.6"; sha256="0ifrrfm4yp1416z58qgnak042rgj1xvqby2vvzgrv19z6b3250p3"; depends=[lattice Matrix numDeriv]; }; - DOPE = derive2 { name="DOPE"; version="1.0.4"; sha256="1wacgv7iid141n0g40cpph09zjqdccyfsxrc1pjyrwqjrr464fc5"; depends=[dplyr]; }; + DOPE = derive2 { name="DOPE"; version="2.1.0"; sha256="1ccg0sgxvv4c9522f2wynp9j37cnlf4gdaymxgi1jxdlikm3ls5r"; depends=[dplyr magrittr stringr tibble tidytext]; }; DOS = derive2 { name="DOS"; version="1.0.0"; sha256="0vvkwn4wfvspbk74nb6124hdx9158h6yfksib14xqq7rx7c97ad4"; depends=[MASS]; }; DOS2 = derive2 { name="DOS2"; version="0.5.2"; sha256="0lcqk2fxfl5pdnxlpppqiqnyc23jyhp1kcxwci8ilagjv4djipmw"; depends=[MASS sensitivity2x2xk sensitivitymult sensitivitymv senstrat]; }; + DOSPortfolio = derive2 { name="DOSPortfolio"; version="0.1.0"; sha256="1aw40xlwahzvikf31y4cbzdrlmgwg3y765bsjzlvc8wqrjig3ghs"; depends=[Rdpack]; }; DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; - DOVE = derive2 { name="DOVE"; version="1.5"; sha256="0ra0xak10zhdnmv3qs9lacdmq5hgi8cy4h06zr0wlfpyqg8xwwzp"; depends=[survival]; }; + DOVE = derive2 { name="DOVE"; version="1.7"; sha256="1lb5n9vhxyvajz8ax99hf8r75gwrs2dma3jg84mh2d705wcy3x48"; depends=[Rcpp RcppArmadillo survival]; }; DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; DPP = derive2 { name="DPP"; version="0.1.2"; sha256="1qalcm4gwh03qpy07d0p323ccq8xmk04v6z30g7wg6ic613bqg7m"; depends=[coda Rcpp]; }; - DPQ = derive2 { name="DPQ"; version="0.4-2"; sha256="0h6605jqqh0wivcpyxn67br9111f4gkyf6fs5xma8mjjvbf8vlwz"; depends=[sfsmisc]; }; - DPQmpfr = derive2 { name="DPQmpfr"; version="0.3-0"; sha256="00zi574g4dxxwchhqfbd7dwg1h6bxmg530h3n6r19sjvhhnd0mbz"; depends=[DPQ gmp Rmpfr]; }; + DPQ = derive2 { name="DPQ"; version="0.4-4"; sha256="1x0139g7wgbvk4a6iljn4rpyahgm727iad4zg2mvh8lm8c9avsss"; depends=[sfsmisc]; }; + DPQmpfr = derive2 { name="DPQmpfr"; version="0.3-1"; sha256="0f3l6dhiqnlix5vdz65pnxic43hcd4xiz64sh3cp8xs8cbmlnqcw"; depends=[DPQ gmp Rmpfr]; }; DPWeibull = derive2 { name="DPWeibull"; version="1.7"; sha256="1z261fhx5dr3yxfy10jrnj5xpc5i8bcs169wqp9p32frwpz20ad3"; depends=[binaryLogic prodlim Rcpp RcppArmadillo survival truncdist]; }; DPtree = derive2 { name="DPtree"; version="1.0.1"; sha256="0d7zf695lwkx4gv50f08cbi3p3mjjay0qgrbmvybf9m15i4zmyd7"; depends=[MASS MCMCpack plyr Rdpack]; }; DRAYL = derive2 { name="DRAYL"; version="1.0"; sha256="0cf5pyx6nwh8srdylpnmymv3dr67fm6qqpwd1hvj1wmyfc8fznpp"; depends=[cubature pracma RConics rmutil]; }; DRDID = derive2 { name="DRDID"; version="1.0.1"; sha256="10n0vcj0lcg0xypqmlbsws069xbgbxpgkc7kxbis04ksq7h43d5z"; depends=[BMisc trust]; }; DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; - DRHotNet = derive2 { name="DRHotNet"; version="1.3"; sha256="1hfg7dh37lpar4byqxhjkpv8w18iy2rgpjqb312v3k9cdb4g8qi2"; depends=[maptools PBSmapping raster sp spatstat spatstat_core spatstat_geom spatstat_linnet spdep]; }; + DRHotNet = derive2 { name="DRHotNet"; version="2.0"; sha256="1hj321qy6jvdicxksnrkzwhdgzjs7pl1bxj6bm0135qjpfmj3v8m"; depends=[maptools PBSmapping raster sp spatstat spatstat_core spatstat_geom spatstat_linnet spdep]; }; DRIP = derive2 { name="DRIP"; version="1.6"; sha256="08qyv2xwl3a70jrpmyxq37g0cryzc0ca904znyhzidmjgy13d18i"; depends=[]; }; DRR = derive2 { name="DRR"; version="0.0.4"; sha256="1y70si1gig4l7jx5jiqsqliyywfsvimkx53x3zh1lc3yj2j6bqwk"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; DRomics = derive2 { name="DRomics"; version="2.2-0"; sha256="10n55vxjjx52r22lmf1bfblzdrbsbccwwpqqx3p6l02fi6h7fd20"; depends=[DESeq2 ggplot2 limma SummarizedExperiment]; }; - DSAIDE = derive2 { name="DSAIDE"; version="0.9.1"; sha256="01p65mldayklj6yq7l2wsh7apxa88403mv4k4dlziykkwdxij7m3"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; - DSAIRM = derive2 { name="DSAIRM"; version="0.8.7"; sha256="1rrawf0sr3parl5h2a8pvji2kyj51dnsmgm2xz667nqi24zzws1k"; depends=[adaptivetau boot deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; + DSAIDE = derive2 { name="DSAIDE"; version="0.9.3"; sha256="11sz57a0mmhk3lj621wnccmcbbrxp0ipg99phfk3wb927985p0zv"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; + DSAIRM = derive2 { name="DSAIRM"; version="0.9.3"; sha256="1igwm6zm987xjyfvwakxa5ckb1chiaykcjcambkxpjyi1b6gg6gf"; depends=[adaptivetau boot deSolve dplyr ggplot2 gridExtra lhs nloptr plotly rlang shiny XML]; }; DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; }; - DSI = derive2 { name="DSI"; version="1.2.0"; sha256="04halpcrxpgmvgxw1szmxgr46b0i5wqhbphbr2a467p4612c65c3"; depends=[progress R6]; }; + DSI = derive2 { name="DSI"; version="1.3.0"; sha256="0c5phlhkwdx4w1szhn6ym2jc632mhpac417l2axl3a8jx63c1g25"; depends=[progress R6]; }; DSL = derive2 { name="DSL"; version="0.1-7"; sha256="05wj3zypr2kqfbka930qnwnk2r43pqi13pbs5n6lm8vdq4zjblw4"; depends=[]; }; - DSLite = derive2 { name="DSLite"; version="1.2.0"; sha256="1imbayqil8xj27aqpdzm0xjciwxflway9irwxsggzzhcmgwgygmp"; depends=[DSI R6]; }; + DSLite = derive2 { name="DSLite"; version="1.3.0"; sha256="05wm02bwa4kcbg0q95368pnmnm0lpn6abk4ffliygha19d0pgpsf"; depends=[DSI R6]; }; DSMolgenisArmadillo = derive2 { name="DSMolgenisArmadillo"; version="1.3.5"; sha256="14xk8i2z4qwrbdyb0nh69vzsyf17q5xzbqs9nqj38i4xsymxmzr6"; depends=[base64enc DSI httr MolgenisAuth stringr urltools]; }; - DSOpal = derive2 { name="DSOpal"; version="1.2.0"; sha256="1g3k1vf1qmb2pw3n9693r9mbhblnyj7a85dgkxqnqaiyl0jvgz0f"; depends=[DSI opalr]; }; - DSSAT = derive2 { name="DSSAT"; version="0.0.2"; sha256="15v64cgbfi51kj3p2wjmir8cfznhilx4gsd5w24734lwblmqf1bm"; depends=[dplyr glue lubridate purrr readr rlang stringr tidyr]; }; + DSOpal = derive2 { name="DSOpal"; version="1.3.1"; sha256="1f5lh3j7yfxa5rpcfknwqralnn108mg8813k8sclav8f2y3qh9pi"; depends=[DSI opalr]; }; + DSSAT = derive2 { name="DSSAT"; version="0.0.4"; sha256="0wy1n1b2dnm6i1p18qrw43d42kgpp9dvg3zaim4277c6hsa7vw9p"; depends=[dplyr glue lubridate purrr readr rlang stringr tidyr]; }; DSWE = derive2 { name="DSWE"; version="1.5.1"; sha256="129dx5sf938pqpbqbar6zwma58m59if45pp7x6zwvnh2n03gaxy8"; depends=[BayesTree e1071 FNN gss KernSmooth matrixStats mixtools Rcpp RcppArmadillo]; }; DSjobtracker = derive2 { name="DSjobtracker"; version="0.1.1"; sha256="1vi07n7ygsdjj4830rnx7kvacmnizl146c6bfw2fnby47apg38f9"; depends=[]; }; DSpoty = derive2 { name="DSpoty"; version="0.1.0"; sha256="18z8gk3zj7k2szxg9579qy5klrqjw6zsk5x9jmwrv4qhb98fyji6"; depends=[dplyr httr purrr stringr]; }; DSsim = derive2 { name="DSsim"; version="1.1.5"; sha256="0dr8dc91m7s5c198k9cb26a09f14wb8ihr46c0mr9cg33l2wf3nv"; depends=[fields mgcv mrds rgeos shapefiles sp splancs]; }; DStree = derive2 { name="DStree"; version="1.0"; sha256="14wba25ylmsyrndh007kl377dv4r34wr1555yxl6kyxrs4yg3jir"; depends=[Ecdat pec Rcpp rpart rpart_plot survival]; }; DSviaDRM = derive2 { name="DSviaDRM"; version="1.0"; sha256="1hj2pgnldrpgapwwz1kf4k6mvyzwdvb1i6czd7sbimsx5hafwps8"; depends=[igraph ppcor]; }; - DT = derive2 { name="DT"; version="0.18"; sha256="1vxqmj01504k9639m2cig1s4qflz3dj54h9rgx5qa72fpkvkk411"; depends=[crosstalk htmltools htmlwidgets jsonlite magrittr promises]; }; + DT = derive2 { name="DT"; version="0.19"; sha256="04rv1rprqlc56hycxpqkbmwmq4wjvmanq2lwxrflmf2s46pbv9ms"; depends=[crosstalk htmltools htmlwidgets jquerylib jsonlite magrittr promises]; }; DTAT = derive2 { name="DTAT"; version="0.3-4"; sha256="1ddmih8cxbgc1p4m0sm8gdbnf0d3ka8z7014zd4aykz75j3pr002"; depends=[data_table dplyr Hmisc jsonlite km_ci pomp r2d3 shiny survival]; }; DTAXG = derive2 { name="DTAXG"; version="0.1.0"; sha256="1jxa0ix0z35i0xdnjl698j8iqjmp6nz8ckah9bap5ay9rkq0xd7f"; depends=[]; }; DTAplots = derive2 { name="DTAplots"; version="1.0.2.4"; sha256="12pdm3g7jxbq2pjvxiz5z3fs0k1g45lwcfqm1h42lxqyzafxswph"; depends=[]; }; @@ -1094,11 +1134,11 @@ in with self; { DTR = derive2 { name="DTR"; version="1.7"; sha256="1lzvk9ar6xf3n2vvy8vb9mvrbx3nafzzhvz5g7vf79jd71yz54jd"; depends=[aod ggplot2 survival]; }; DTRlearn2 = derive2 { name="DTRlearn2"; version="1.1"; sha256="0l756zb1wkpa1z5zjkc8jndmh2630gckxxfqslabzjmgsjf7fjgm"; depends=[foreach glmnet kernlab MASS Matrix]; }; DTRreg = derive2 { name="DTRreg"; version="1.7"; sha256="0fr2c8fg1acs2kk0r67zml5fp71mvxw116ixqf7yq34n9ljd5yph"; depends=[dplyr MASS]; }; - DTSg = derive2 { name="DTSg"; version="0.7.0"; sha256="0fqvpffjkkfs8wdv12wi0bp9h02vq2lqn41z29283s0dp8gn6p7l"; depends=[checkmate data_table R6]; }; + DTSg = derive2 { name="DTSg"; version="0.7.1"; sha256="0bqss8jrbd5ha373nkr38mnihchdzmprmvm7p82llxyshjym9gkb"; depends=[checkmate data_table R6]; }; DTWBI = derive2 { name="DTWBI"; version="1.1"; sha256="06lp4yc5nhacrgic78l014g2w1ibwgs8dp8zrahk5aripaczl25y"; depends=[dtw e1071 entropy lsa rlist]; }; DTWUMI = derive2 { name="DTWUMI"; version="1.0"; sha256="0pybgbfs2yp2ljbs0kra5z70x3llkiwdngp6cadgs3j9rar4vq4q"; depends=[dtw DTWBI e1071 entropy lsa rlist]; }; - DTwrappers = derive2 { name="DTwrappers"; version="0.0.1"; sha256="022vwi7ygjfa7j8p204l8y70spwd6f72hqqbhdiprahl36bhxbhy"; depends=[data_table]; }; - DUBStepR = derive2 { name="DUBStepR"; version="1.1.1"; sha256="0jvgm9cr868ry399rzh1gj2qp3qaypgvci6akkk1clv6hkmbzlib"; depends=[Matrix matrixcalc qlcMatrix RANN Seurat]; }; + DTwrappers = derive2 { name="DTwrappers"; version="0.0.2"; sha256="028n1211h9gmv050xfiw347x59gykb6ndvd371fdf53bbkqirqa4"; depends=[data_table]; }; + DUBStepR = derive2 { name="DUBStepR"; version="1.1.3"; sha256="0kldwqdsg0mmdggbwcibgbjj0v7a2qkysldgbg3ay3ga8hgvkdpq"; depends=[Matrix matrixcalc qlcMatrix RANN Seurat]; }; DVHmetrics = derive2 { name="DVHmetrics"; version="0.4.1"; sha256="1c98847b5pgmhcszdnllpg3iq88693xjss2nxgr9dya52x1kbyaj"; depends=[DT ggplot2 KernSmooth reshape2 shiny]; }; DWBmodelUN = derive2 { name="DWBmodelUN"; version="1.0.0"; sha256="1m71fx9l2rq27d2q5hiqxiyljvf5wjcfkcblqw19rpiixrinv4va"; depends=[dygraphs htmltools ncdf4 raster rgdal]; }; DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; }; @@ -1114,13 +1154,14 @@ in with self; { Data2LD = derive2 { name="Data2LD"; version="3.2.1"; sha256="1y6nyysm96q5mlrcl0vkjhq5lr624n2266xpmyl4ck0h1dhjb6bz"; depends=[deSolve fda knitr rmarkdown]; }; DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; }; DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; - DataEditR = derive2 { name="DataEditR"; version="0.0.9"; sha256="1m9bh4hgm4rkr25kira3835bpj3x3ig796hyb8b43qqy353rlrds"; depends=[htmltools miniUI rhandsontable rstudioapi shiny shinyBS shinyjs shinythemes]; }; + DataEditR = derive2 { name="DataEditR"; version="0.1.3"; sha256="0s1c6hzih94mcxkjlc3qf36d5pzbaj7rhi0fsm31ps3224dcn4p4"; depends=[htmltools miniUI rhandsontable rstudioapi shiny shinyBS shinyjs shinythemes]; }; DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; }; DataExplorer = derive2 { name="DataExplorer"; version="0.8.2"; sha256="0451fnlaqvyzpqhn25g6lj2svjfsfaxii9vmwhqw7p29fl71zaln"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; - DataGraph = derive2 { name="DataGraph"; version="1.2.1"; sha256="164wbh3by8qf0p84l5v7vwrzf0f2s305fwmrl01khcll8pk34xlm"; depends=[Rcpp]; }; + DataFakeR = derive2 { name="DataFakeR"; version="0.1.2"; sha256="0158ffj6yfvdirxar39rl6n730sza0lzq48v65p43whz6jbf9ybb"; depends=[dplyr glue magrittr purrr R6 tibble tidygraph yaml]; }; + DataGraph = derive2 { name="DataGraph"; version="1.2.5"; sha256="0f5wh2lyddr48wdcqgk1y1jbs9q9rim86v4g1c7m4xgnvyp81mih"; depends=[Rcpp]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; DataPackageR = derive2 { name="DataPackageR"; version="0.15.8"; sha256="0jrla69v47nycrqb4lccw2s2qabk2l9nm4sgwd1lfpq1zl8b3jwg"; depends=[assertthat crayon desc devtools digest futile_logger knitr purrr rmarkdown roxygen2 rprojroot stringr usethis yaml]; }; - DataSpaceR = derive2 { name="DataSpaceR"; version="0.7.4"; sha256="1sag3mzwx6sb7xjg3xbid9487bgs2rl3xm3qyz1zzd8qm58s3h55"; depends=[assertthat curl data_table digest httr jsonlite R6 Rlabkey]; }; + DataSpaceR = derive2 { name="DataSpaceR"; version="0.7.5"; sha256="0n7f7092lmhac1xb7yw4a68nmnk0cad2j6lkaj2v0d1nl2q7pvam"; depends=[assertthat curl data_table digest httr jsonlite R6 Rlabkey]; }; DataVisualizations = derive2 { name="DataVisualizations"; version="1.2.2"; sha256="1fqsim2kz57f4c9isj6pivxnsabhdpj17dpyly4d4jh5bgyscqzm"; depends=[ggplot2 pracma Rcpp RcppArmadillo reshape2 sp]; }; DataViz = derive2 { name="DataViz"; version="0.2.8"; sha256="1dr5nvdzc63x9ymlysvv5i8b7zcffq13pa39q0ychdwr1s3x7vzw"; depends=[Rcpp tibble]; }; DatabaseConnector = derive2 { name="DatabaseConnector"; version="4.0.2"; sha256="10ln53hfgkd3janlk11s3mi99r69xaaz7p9lbsi6s83yhf4kgv3r"; depends=[bit64 DBI rJava rlang SqlRender stringr urltools]; }; @@ -1131,8 +1172,8 @@ in with self; { DeCAFS = derive2 { name="DeCAFS"; version="3.2.3"; sha256="1sc9wx33lhdwp5ql4cq3jrqilrykhn44p9idccsn702pyf9xy4lq"; depends=[ggplot2 Rcpp robustbase]; }; DeLorean = derive2 { name="DeLorean"; version="1.5.0"; sha256="1ry6j4mvxms9hddi9c56p9yhjh66fzss41wqkf6xq398h1wbn4q1"; depends=[BH broom coda dplyr fastICA functional ggplot2 kernlab lattice MASS memoise Rcpp RcppEigen reshape2 rstan rstantools seriation StanHeaders stringr]; }; DeRezende_Ferreira = derive2 { name="DeRezende.Ferreira"; version="0.1.0"; sha256="05c99z3hlwwm0p02cl9z6gjwfxfq2b2qn90l85270bi16llgf42h"; depends=[xts]; }; - DeclareDesign = derive2 { name="DeclareDesign"; version="0.26.0"; sha256="1k2g05a3q60jgcm9589lw4q1gxa9lpw1cgifdrayvw7ym1wwzxk9"; depends=[estimatr fabricatr generics randomizr rlang]; }; - DecomposeR = derive2 { name="DecomposeR"; version="1.0.3"; sha256="19p3iqpjjbfqb2jgd4n443qi3ksjys426bg41ql4bfp3af0nfw4l"; depends=[colorRamps dplyr hexbin hht StratigrapheR]; }; + DeclareDesign = derive2 { name="DeclareDesign"; version="0.28.0"; sha256="0ggqagmcqsw7g5pqyzpxzy5r8kn0q3i4b4kzywvshln95gdwliwj"; depends=[estimatr fabricatr generics randomizr rlang]; }; + DecomposeR = derive2 { name="DecomposeR"; version="1.0.4"; sha256="0px999jzxnsl9mg4nch0zwzfjpm5mfj1yk5q42vbb7q42iv1ifbf"; depends=[colorRamps dplyr hexbin hht StratigrapheR tictoc usethis]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.2"; sha256="1za2qvdq96f75rmnm421xmq8s01ny4666ghv14i72iy3s4ml2hq9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; DeducerPlugInExample = derive2 { name="DeducerPlugInExample"; version="0.2-0"; sha256="03aw7wr957xzw920ybyzxnck5kx0q2xpcrpq8jh2afyzszy6hzbi"; depends=[Deducer]; }; @@ -1154,14 +1195,14 @@ in with self; { DepLogo = derive2 { name="DepLogo"; version="1.2"; sha256="13y3akmrj5x1mn1sgha1jryzswg4kqxwswbm3m5z92mcm2zw4r9l"; depends=[]; }; DepthProc = derive2 { name="DepthProc"; version="2.1.3"; sha256="1dq5y6fgmm00imkim4v2s6kn4z5qnwa0dkfkcq4pap7imvi35aab"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; Deriv = derive2 { name="Deriv"; version="4.1.3"; sha256="130g3mv0z9sqs6y23a0a94512iiw05yr6fp378vhdxxbignzbnyv"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.41"; sha256="0875agn2yy4d5bdvz53nxd8lg2lnngnfv15s4cpdnzfkv0gjcf5i"; depends=[BH boot data_table Exact expm gld MASS mvtnorm Rcpp rstudioapi]; }; + DescTools = derive2 { name="DescTools"; version="0.99.43"; sha256="1zx4wwry7pph21q37r0r1vgx616pki232ych2wl9z2s2fmclwg4c"; depends=[BH boot data_table Exact expm gld MASS mvtnorm Rcpp rstudioapi]; }; DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.9"; sha256="12zwhy05wkwxldjyjxqcfsww73pxyni17c5g3b0slrxk6ag13wl7"; depends=[DescTools foreign manipulate rstudioapi writexl]; }; DescrTab2 = derive2 { name="DescrTab2"; version="2.0.7"; sha256="1yknr146v7d6ahm7glarqzpk4z4nyg9mwmgnrsfszwwryzpck5ii"; depends=[cli DescTools dplyr exact2x2 flextable forcats kableExtra magrittr nlme officer rlang scales stringr tibble tidyselect]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.7"; sha256="0241mbz0y3ala7fsb4fwjd0xigsk0wq77hfrjyvnnp97rfjfzmcv"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.3.2"; sha256="0f2inlfkwl2q9ll5lh0ynpsbf6zci149s5nj0s0x0g98z72z8mly"; depends=[dplyr jsonlite magrittr RCurl reshape]; }; - DescriptiveWH = derive2 { name="DescriptiveWH"; version="1.0.1"; sha256="14pmi8qcl09s7s3llyiwvzrv9ffmmkb7kipqcxvzsxwikhcimrl5"; depends=[]; }; - DesignCTPB = derive2 { name="DesignCTPB"; version="1.1.1"; sha256="0w2r4zrs2r7qlivrchbiy3yzmdhrbnx45kfsnwhg800dqxhg9biy"; depends=[fields magrittr mnormt plotly reticulate]; }; - DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.6"; sha256="0y450r3mzhgmpdn0700k78msyyvv1si4z8r24xbp1qzhginkkr85"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; + DescriptiveWH = derive2 { name="DescriptiveWH"; version="1.0.3"; sha256="17baga9vs8959bzm7qs11zj35a6glh1ig5qz8kwq7m69h51l2gar"; depends=[]; }; + DesignCTPB = derive2 { name="DesignCTPB"; version="1.1.3"; sha256="1872spxzi5mxxz68nw3ahh6yj50yybrpff4q1xpx0xk89yks13hg"; depends=[dplyr fields mnormt plotly reticulate]; }; + DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.8"; sha256="1qmd7f3svcdiriw2ak7rl1yc3kkc3l0krdif3vjg73i7n7ydcv1f"; depends=[DeclareDesign estimatr fabricatr generics glue randomizr rlang]; }; DetLifeInsurance = derive2 { name="DetLifeInsurance"; version="0.1.3"; sha256="15yh66mn84cm5ix99lg5lp783dp8il03dyirkhil7m5pwzss42r4"; depends=[]; }; DetMCD = derive2 { name="DetMCD"; version="0.0.5"; sha256="034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.5"; sha256="1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; @@ -1186,20 +1227,20 @@ in with self; { Diderot = derive2 { name="Diderot"; version="0.13"; sha256="04d1drxn99r0fqq3zym7yyip9c8rfqhghq20q4zyb42l3hfgv9ai"; depends=[data_table doParallel foreach igraph RCurl splitstackshape stringi]; }; DiffCorr = derive2 { name="DiffCorr"; version="0.4.1"; sha256="1kxp9dbiww086rmvmjvfhbk7jl36dkj88qwii6zg57llf7l5l4hm"; depends=[fdrtool igraph multtest pcaMethods]; }; DiffNet = derive2 { name="DiffNet"; version="1.0-0"; sha256="04dvf0qxnc6jizwfjxw731j7d2fxyapk06rmqvga6h3p075q0mqk"; depends=[data_table doParallel foreach gplots Hmisc igraph lsa Matrix qlcMatrix Rcpp RcppEigen]; }; - DiffXTables = derive2 { name="DiffXTables"; version="0.1.1"; sha256="1yjykxc3y6jclhl28capqgjz2qj7sizr4y1g4d6whllgfawvwfby"; depends=[pander Rdpack]; }; + DiffXTables = derive2 { name="DiffXTables"; version="0.1.3"; sha256="0a0q1fz80jlcrk4rw70yjb8djxgsm5axih45vi4dqpg6n8xlrzw2"; depends=[pander Rdpack]; }; DiffusionRgqd = derive2 { name="DiffusionRgqd"; version="0.1.3"; sha256="1gf5jpvimfrc9ccva0jk85rl4zfkbijm2305ky1rxcgm4kgw4lax"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRimp = derive2 { name="DiffusionRimp"; version="0.1.2"; sha256="1h7145ldlgwrrwj4l1wxdp2rbg2pm4v3pngiq0saz0xi3vpcxwl6"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DiffusionRjgqd = derive2 { name="DiffusionRjgqd"; version="0.1.1"; sha256="1yb1jaq324qm2x8cl3bs2dflnsx8yfygpw2m3kk5hzaai9gfkqjf"; depends=[colorspace Rcpp RcppArmadillo rgl]; }; DirStats = derive2 { name="DirStats"; version="0.1.7"; sha256="0xc8cns8l83y1k2ad10nxm4290xv8wlrhcx0sj7mpklzpizi9zin"; depends=[movMF rotasym]; }; Dire = derive2 { name="Dire"; version="1.0.3"; sha256="0g02ak7ki103a3jw3pj3c6rmggcjv8dk0zk4mwann6xbbviwz2ls"; depends=[foreach haven iterators Matrix minqa Rcpp]; }; - DirectEffects = derive2 { name="DirectEffects"; version="0.2"; sha256="0cawn1i1cyczsr9zpcaky79dfdl9anfjgiaa2404capacnj3call"; depends=[Formula glue sandwich]; }; + DirectEffects = derive2 { name="DirectEffects"; version="0.2.1"; sha256="0cjqp4gam1psd11d6h99pi3ramnaybp6bij86wbgqji2icqlvghg"; depends=[Formula glue sandwich]; }; DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.3"; sha256="1qlfvzlig3a2v78fiq6sbbpxklmjczikxdw57m6mqngzrl9vdl2g"; depends=[]; }; DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; - Directional = derive2 { name="Directional"; version="4.9"; sha256="0jgb2805f14yprqnhgk8zxqr4xb8v6ag6f2s5cn378gn0xirc1q7"; depends=[bigstatsr doParallel foreach RANN Rfast Rfast2 rgl]; }; - DirichletReg = derive2 { name="DirichletReg"; version="0.7-0"; sha256="10189c3mj85nbqp7fd5ll4g0qr950309hhma4b7bpv2gb7hvpzsp"; depends=[Formula maxLik]; }; + Directional = derive2 { name="Directional"; version="5.0"; sha256="0dl90ail1ls800knfvkrjwjaiikjgkk3l59wk2k4c5jh2brng5al"; depends=[bigstatsr doParallel foreach RANN Rfast Rfast2 rgl]; }; + DirichletReg = derive2 { name="DirichletReg"; version="0.7-1"; sha256="1ql5mwb7zb06y9j6inrlngq7c15as4j17wd8kc71fxs0a2jdj7xi"; depends=[Formula maxLik]; }; DisHet = derive2 { name="DisHet"; version="1.0.0"; sha256="056jcs1qpiyadnmlzd0cj4kp0qzkichxi0pdnxypyq1fsqnpvan3"; depends=[gtools matrixStats]; }; - DisImpact = derive2 { name="DisImpact"; version="0.0.14"; sha256="1pzvrk9qna9yrmjxn964ysncpram7qqf3sxmfpnjn7zwicjkj4is"; depends=[dplyr purrr rlang tidyr tidyselect]; }; - DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3-4"; sha256="0r3z56xcb5als38rhydia482j5xl9kcgamdj6ibd22yi0ya6k4iv"; depends=[Rcpp]; }; + DisImpact = derive2 { name="DisImpact"; version="0.0.15"; sha256="1cksc68gqvlah6rzlh1h7glsl55v9kxkayvv05hz6fkcds01qkga"; depends=[dplyr purrr rlang tidyr tidyselect]; }; + DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.3.6"; sha256="06z9phxg3wjxvndcl3fnh99wbs2j8j2m7wndm0hskhcgijab5cgg"; depends=[Rcpp]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; DiscreteQvalue = derive2 { name="DiscreteQvalue"; version="1.1"; sha256="1xl6m3sf02v4y26375jn846ixzcxpqim1r6d4j56y8b5c243jg4h"; depends=[]; }; @@ -1207,7 +1248,7 @@ in with self; { DiscriMiner = derive2 { name="DiscriMiner"; version="0.1-29"; sha256="1ii8aa4dwfk991qdnpmkva20wvs5fqcna9030c799ybf11qpdass"; depends=[]; }; Disequilibrium = derive2 { name="Disequilibrium"; version="1.1"; sha256="1jm5n01ih4rnga13058yh939zp2lvjn5pgb6rrwp5fdlk5kqsgb0"; depends=[Formula numDeriv optimr]; }; DisimForMixed = derive2 { name="DisimForMixed"; version="0.2"; sha256="00mknsalikangr17946877m5fy2jgkgasgl6ng4f2nr44f0q9l6q"; depends=[cluster dplyr]; }; - Distance = derive2 { name="Distance"; version="1.0.2"; sha256="09cgbhk2ilxkbbaw3hw6zdgrsq174y7bffgkc48gaybnvf8vdgy5"; depends=[dplyr mrds rlang]; }; + Distance = derive2 { name="Distance"; version="1.0.4"; sha256="14sdkggacwv3dl8wd2vspy9vn1psz8yw2nvs12c2vjkgxa75dgcl"; depends=[dplyr mrds rlang]; }; DistatisR = derive2 { name="DistatisR"; version="1.0.1"; sha256="0myzfki8yrk0nhgdgsqs4wjbqhzmkdil1g005hc7p4lz3gi09bfx"; depends=[car prettyGraphs]; }; DistributionFitR = derive2 { name="DistributionFitR"; version="0.1"; sha256="0wg43gqsdy1ja0l489k27k9q1w2zq45wzmqnv9wfc734rf8kvlba"; depends=[doParallel foreach stringr]; }; DistributionOptimization = derive2 { name="DistributionOptimization"; version="1.2.6"; sha256="0pp0f7c9szyx426bnnz4fz4vh5q73m8x896z6pqgx04b6v445361"; depends=[AdaptGauss GA ggplot2 pracma]; }; @@ -1218,18 +1259,18 @@ in with self; { DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.6"; sha256="16x3fpchgd12mccvr1k11vjka97sy5vjvjcyd5y3pskgnpycc2sv"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; DnE = derive2 { name="DnE"; version="2.1.0"; sha256="02cbfb3m9xf24wkgqc06k3k0rx7qlqh4ma43khg6fpvif6yyahrn"; depends=[]; }; DoE_MIParray = derive2 { name="DoE.MIParray"; version="0.13"; sha256="0lbcqfizgrnqmp0b2yn14br7xmabbhywy8h7161hx6hnvnam5r99"; depends=[combinat DoE_base]; }; - DoE_base = derive2 { name="DoE.base"; version="1.1-6"; sha256="13lkwkhc376dc69kkhryjr1ld9y1yasfpdf2rxblncxg4k79193a"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; + DoE_base = derive2 { name="DoE.base"; version="1.2"; sha256="06c90a329f5gjzhi3qdcyyp1z9n9lplkis0fld5r7dw07qknby32"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; DoE_multi_response = derive2 { name="DoE.multi.response"; version="0.1.0"; sha256="1289jlp10999kvyg5adw3dyc2mhh20i6biyqjbxd6g80a8dajknx"; depends=[DoE_wrapper]; }; DoE_wrapper = derive2 { name="DoE.wrapper"; version="0.11"; sha256="08bgfaiivqqnkhjb18flk1cpa33rh70i6g8v25x1ma3ffxqrwh96"; depends=[AlgDesign DiceDesign DoE_base FrF2 lhs rsm]; }; DoEstRare = derive2 { name="DoEstRare"; version="0.2"; sha256="0y9ymw7114jk1rwiasq400bpgvkxv6rpc954c7v9mgxd3c2nfza7"; depends=[]; }; DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; - DockerParallel = derive2 { name="DockerParallel"; version="1.0.0"; sha256="1sdghpm6zka87n35l1824mj682r7a6g4yisb5nrh95bkhwn3azbc"; depends=[adagio]; }; + DockerParallel = derive2 { name="DockerParallel"; version="1.0.4"; sha256="1fgs2f5czb05fiqxqp00qggni041ml4s3x05h9n4mmka9mwxi34b"; depends=[jsonlite]; }; Dodge = derive2 { name="Dodge"; version="0.9-2"; sha256="0767n6hyspqrv5cgx3ghhai0qffj6haga7s86pv7mq8zvjcxjlzv"; depends=[]; }; Dominance = derive2 { name="Dominance"; version="1.2.0"; sha256="1z2gcs7myf90986gzw9g3914ph5cyg6pq6k53h4z566x883q8maz"; depends=[chron igraph]; }; - DoseFinding = derive2 { name="DoseFinding"; version="0.9-17"; sha256="1lj96443dj61nxqfl20rc1f6ja2clbr9j6b6l8vi2gpspx5i76qw"; depends=[lattice mvtnorm]; }; + DoseFinding = derive2 { name="DoseFinding"; version="1.0-1"; sha256="06qpaqvaa2wgnaw74ynxsai7yyk44advzkzhwr4dc6glsbgmjc5a"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; - DoubleML = derive2 { name="DoubleML"; version="0.2.1"; sha256="1y9vahinxnr7x3vb2nd7wpl4acsx5vnmgwn10prh4pabr1675vdi"; depends=[checkmate clusterGeneration data_table mlr3 mlr3learners mlr3tuning mvtnorm R6 readstata13]; }; + DoubleML = derive2 { name="DoubleML"; version="0.3.1"; sha256="0p79z3w2p1lx6w6v9gs1mgrf0kacirqhgzgvhcr4f82qrh01zfz5"; depends=[checkmate clusterGeneration data_table mlr3 mlr3learners mlr3misc mlr3tuning mvtnorm R6 readstata13]; }; Dowd = derive2 { name="Dowd"; version="0.12"; sha256="1fgaq22n7gm8pqxdfkiayqgjfqjn7knjjjr1x12jgv77cv08xyjk"; depends=[bootstrap forecast MASS]; }; Dpit = derive2 { name="Dpit"; version="1.0"; sha256="02pnc00sk3bwxmxrg27638x0q62r7nsx2nr14zjjc5q880prdisv"; depends=[fitdistrplus gsl moments VGAM]; }; DrBats = derive2 { name="DrBats"; version="0.1.5"; sha256="1iaffippp9kwfrwryf7klmn8nsm2k8pc0bkgpxcsl4vxyy2na3mp"; depends=[ade4 coda MASS Matrix rstan sde]; }; @@ -1238,7 +1279,7 @@ in with self; { DramaAnalysis = derive2 { name="DramaAnalysis"; version="3.0.2"; sha256="0nsnwais0r592c50nphfzkr1bbygl67mriwsx7dxbvmpdsswlvl1"; depends=[data_table git2r httr readr reshape2 stringr tokenizers xml2]; }; DriftBurstHypothesis = derive2 { name="DriftBurstHypothesis"; version="0.4.0.1"; sha256="1pmsbv1rl79s520nxj536m8gf7xyfjskj8r88rxmxscbgp8c1xz2"; depends=[Rcpp RcppArmadillo xts zoo]; }; DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; - DriveML = derive2 { name="DriveML"; version="0.1.2"; sha256="1zs518rhilb00pciv1mcgp3mz87pqszy0lcfsln8hrn2p68xz8wq"; depends=[caTools data_table ggplot2 iml mlr ParamHelpers rmarkdown sampling SmartEDA]; }; + DriveML = derive2 { name="DriveML"; version="0.1.3"; sha256="090n0hafsg86kf1vw9d971fgd6fvf88szhsv3kh2jl3l5x9qg0fj"; depends=[caTools data_table ggplot2 iml mlr ParamHelpers rmarkdown sampling SmartEDA]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.4.0"; sha256="0wm5kr2pkgbvh9svjq8zq46zn50hwf58rs3y1ybnwcfjc2q75h1s"; depends=[DEoptim ggplot2 Rcpp RcppArmadillo rtdists RWiener]; }; DtD = derive2 { name="DtD"; version="0.2.2"; sha256="1czspjdxjhbfk2df7wk0x3d1ilwrjqw4s4gdc4hq0gjcjqyx0c39"; depends=[checkmate Rcpp RcppArmadillo]; }; @@ -1251,13 +1292,14 @@ in with self; { DynTxRegime = derive2 { name="DynTxRegime"; version="4.9"; sha256="0apwqlqdn5vwb4z7s60r2nsgdw7bzkbxj6199aibyansnsai0s35"; depends=[dfoptim kernlab modelObj rgenoud]; }; DynaRankR = derive2 { name="DynaRankR"; version="1.1.0"; sha256="1fzicainh1dm016cglm2x6j1i2g5r71vgrj0dnsflbxc5v426sqm"; depends=[dplyr rlang]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; - DynamicGP = derive2 { name="DynamicGP"; version="1.1-6"; sha256="1d3ycx6vcv7rcagaxvfyxgsdigbzigxarm66ypkdasbli1507is3"; depends=[lhs]; }; + DynamicGP = derive2 { name="DynamicGP"; version="1.1-7"; sha256="1fv7lb01qrgpl0a46360s0iqs7wlyqsda4hdm66vfyqr5pygmikv"; depends=[lhs]; }; DynareR = derive2 { name="DynareR"; version="0.1.1"; sha256="1b7m9z09ps9idj1arza4ka1silrf8rm3gk154px0z3612ls3a3ir"; depends=[knitr]; }; DysPIA = derive2 { name="DysPIA"; version="1.3"; sha256="0ih8sl89h6xbmmjjsbxcvgp6wqk7f1wqzwkc43k3i5w7fgb0hlpc"; depends=[BiocParallel data_table DysPIAData fastmatch parmigene Rcpp]; }; DysPIAData = derive2 { name="DysPIAData"; version="0.1.2"; sha256="1i4z9xhnzih7jnj3l1d6wpgfsayb452sh4q99w2npg1iipsjb1vl"; depends=[]; }; E4tools = derive2 { name="E4tools"; version="0.1.1"; sha256="1kmj1fddybjia9ninhcy75kdmq152zjw7s24chpqr5wsblffr3yx"; depends=[accelerometry anytime BBmisc chron data_table DataCombine doParallel doSNOW foreach ggplot2 hms scales signal]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; + EBCHS = derive2 { name="EBCHS"; version="0.1.0"; sha256="103k4y105dn8v5yb5xk520404sd7c05cxd9iwh2k2v18kbvg8pdp"; depends=[fda pracma]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; EBMAforecast = derive2 { name="EBMAforecast"; version="1.0.2"; sha256="0xnzb7hvkc50b65bgq4xbnzks6sb0241lwd6zwp3cz22s3wpyhhr"; depends=[abind gtools Hmisc plyr Rcpp separationplot]; }; EBPRS = derive2 { name="EBPRS"; version="2.1.0"; sha256="14wal81cai08xr26fpc2w4ramr5jyv7vwfyqb5hzw3kqxx76y9xx"; depends=[BEDMatrix data_table ROCR]; }; @@ -1278,22 +1320,24 @@ in with self; { EDOIF = derive2 { name="EDOIF"; version="0.1.3"; sha256="1lq4j5axybhv34mdsz0rn5nz9x3rzjf6bczzfzrf75k6pwqxim1w"; depends=[boot distr ellipsis ggplot2 igraph simpleboot]; }; EDOtrans = derive2 { name="EDOtrans"; version="0.1.0"; sha256="0xsfh3aib21d6mm3a0ii28m216vgdz8hqx859mxa6bzplp0yhich"; depends=[ABCanalysis AdaptGauss ClusterR DataVisualizations DistributionOptimization ggplot2 rlang]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; + EEMDSVR = derive2 { name="EEMDSVR"; version="0.1.0"; sha256="0m28rrw7lg3sx2aviqphsid2rsp7zksd3fcvk7pxfw16z90y7ifd"; depends=[e1071 Rlibeemd]; }; EEMDelm = derive2 { name="EEMDelm"; version="0.1.0"; sha256="18m4b22sar14admlhagjdxzq16ynvam2c0cv3z168x8xh6zv2xpr"; depends=[forecast nnfor Rlibeemd]; }; - EFA_MRFA = derive2 { name="EFA.MRFA"; version="1.0.9"; sha256="0id0dhpq9350ax573i769m83fncrd6rlp4qmwvf9jz1lbksighf0"; depends=[ggplot2 optimbase PCovR psych reshape2 scales]; }; - EFA_dimensions = derive2 { name="EFA.dimensions"; version="0.1.7.2"; sha256="0b9a5z462b65di4xa0gkx0z6qz354kxr8059nynfrfyzpch5cz15"; depends=[EFAtools polycor psych]; }; + EESPCA = derive2 { name="EESPCA"; version="0.3.0"; sha256="1mxzb44xd9ydfnx4522kp0qm0sgkrm82s6qwm0ly5j6hrvndj3ck"; depends=[MASS PMA rifle]; }; + EFA_MRFA = derive2 { name="EFA.MRFA"; version="1.1.2"; sha256="0p1zkfwjch9y39r7hjccjk7vfbnfwpdak6jfjs1sdpqkjqiw3r86"; depends=[ggplot2 PCovR psych reshape2 scales]; }; + EFA_dimensions = derive2 { name="EFA.dimensions"; version="0.1.7.3"; sha256="0pvdssdcqxynqpwvy0cfw9pgq5m9g3bhn2s57s5qfnf606xal0jy"; depends=[EFAtools polycor psych]; }; EFAtools = derive2 { name="EFAtools"; version="0.3.1"; sha256="1s0x8vp18yixn1vscmad8bgmp6nvn8zxx8xx435bmdlxml73c8xd"; depends=[checkmate cli crayon dplyr future future_apply ggplot2 GPArotation lavaan magrittr progress progressr psych Rcpp RcppArmadillo rlang stringr tibble tidyr viridisLite]; }; EFAutilities = derive2 { name="EFAutilities"; version="2.1.1"; sha256="0kdwdjv4c9rfy49qs7a4134vwa2sm2pcam17a3xii2dq8mghg1za"; depends=[GPArotation MASS mvtnorm plyr]; }; EFDR = derive2 { name="EFDR"; version="1.2"; sha256="1k6y2qxfw5py1brh25apmzqm00y3a458x0wrrmdg604g1m9zlkg5"; depends=[copula doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; }; EGAnet = derive2 { name="EGAnet"; version="0.9.8"; sha256="1mdvp67wnbgmdhdwlgq8p20vhbv4m3fyvdw3zrcxy9zd8mchjydh"; depends=[dplyr GGally glasso igraph lavaan Matrix network NetworkToolbox qgraph semPlot]; }; - EGRET = derive2 { name="EGRET"; version="3.0.5"; sha256="1wjfvinrb3k1x8737ivzlxfjgdndz1zvpkxhd38crsqpjpzjjqd1"; depends=[dataRetrieval fields foreach MASS survival truncnorm]; }; + EGRET = derive2 { name="EGRET"; version="3.0.6"; sha256="0klpfrq2392s56x5q5pxvli4m7ivn146dwyh1svqz9pngqnwbif3"; depends=[dataRetrieval fields foreach MASS survival truncnorm]; }; EGRETci = derive2 { name="EGRETci"; version="2.0.4"; sha256="1g01a03smn5yp261cyk3x310m1mcv4bqyh8y123wam9gpa7dxrp6"; depends=[binom EGRET]; }; - EHR = derive2 { name="EHR"; version="0.3-1"; sha256="1grg1k4lgl3gfvjw5srflrvci39gs2hr3mw82nx7yya95m3f30id"; depends=[data_table]; }; - EHRtemporalVariability = derive2 { name="EHRtemporalVariability"; version="1.1.2.1"; sha256="1253iya21k9rnp7aqg6cs18haiv5vxhgdhsxbcwzd9wzcxwwab5j"; depends=[dplyr lubridate MASS plotly RColorBrewer scales viridis xts zoo]; }; + EHR = derive2 { name="EHR"; version="0.4-1"; sha256="0j5bf80p1k7dsd4cb7qjr5dvp830vxxnjarwk882mlbddyi14i28"; depends=[data_table lubridate pkdata]; }; + EHRtemporalVariability = derive2 { name="EHRtemporalVariability"; version="1.1.4"; sha256="02izrgl526znn4xs10c5l3gv0b5chmgr376i26nli988cypmf32h"; depends=[dplyr lubridate MASS plotly RColorBrewer scales viridis xts zoo]; }; EIAdata = derive2 { name="EIAdata"; version="0.1.1"; sha256="06xq17x3zdk5q9zjvw3lxvayyggnz4ck4wpzzpsdd3s6j1b0fmhz"; depends=[XML xts zoo]; }; EILA = derive2 { name="EILA"; version="0.1-2"; sha256="0wxl9k4fa0f7jadw3lvn97iwy7n2d02m8wvm9slnhr2n8r8sx3hb"; depends=[class quantreg]; }; EIX = derive2 { name="EIX"; version="1.2.0"; sha256="02ry0aqqnd0zh6zbvx1dbq3sdahyqcgabhkvbbw4ig0qk70w62aj"; depends=[DALEX data_table ggiraphExtra ggplot2 ggrepel iBreakDown MASS purrr scales tidyr xgboost]; }; - EKMCMC = derive2 { name="EKMCMC"; version="0.1.0"; sha256="0sfj6w8780fik0ar9bg8zrxkj10wqagvwrngd58g50fc0z4lhr53"; depends=[numDeriv]; }; + EKMCMC = derive2 { name="EKMCMC"; version="1.1.2"; sha256="0filw1xikbv55h7xswlqifd30d43b9y3h2m6i0zv8v54y8mmszfg"; depends=[numDeriv]; }; EL = derive2 { name="EL"; version="1.0"; sha256="13r7vjy2608h8jph8kwy69rnkg98b2v69117nrl728r3ayc46a18"; depends=[]; }; EL2Surv = derive2 { name="EL2Surv"; version="1.1"; sha256="0bn2481rf61qnia468y7k95hhazjaghrv919a2y9ar5wcz5nq2kk"; depends=[survival]; }; ELISAtools = derive2 { name="ELISAtools"; version="0.1.5"; sha256="18f2adhw85f0hsz5gb6xhi0w2phcq364xy9y1jri6ckzs8g0pny7"; depends=[minpack_lm R2HTML stringi]; }; @@ -1315,21 +1359,22 @@ in with self; { EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; }; EMP = derive2 { name="EMP"; version="2.0.5"; sha256="0piagbxk8siagmvzqv2bh12g1y0hy3c0vkxpddlmp7gm3i304rpi"; depends=[ROCR]; }; - EMSC = derive2 { name="EMSC"; version="0.9.2"; sha256="0qdm0g0bwln2ykqvzvxpmv1h9bgqmb1ws0bccjl4f5ni5v295xjn"; depends=[pracma]; }; + EMSC = derive2 { name="EMSC"; version="0.9.3"; sha256="0mk7plkp1mfgi6krxn90vyah4x42960wh9v8k81wvxhyg67wc0ml"; depends=[pracma]; }; EMSNM = derive2 { name="EMSNM"; version="1.0"; sha256="0rhaadzhq9jfpnwxfqcsb3yz96rqlwkm165k5n5jxzwxpg1rg2n0"; depends=[]; }; - EMSS = derive2 { name="EMSS"; version="1.0.2"; sha256="1kgs1xq4q31v0p7nchvvqij8fslyg3gkiwfks1jbswk96gdh5pk7"; depends=[mvtnorm sampleSelection]; }; + EMSS = derive2 { name="EMSS"; version="1.1.0"; sha256="0rvpi1kymvqcls9fp88dir4jwfqk0823km81wxngy0yi1cxg6va5"; depends=[mvtnorm sampleSelection]; }; EMSaov = derive2 { name="EMSaov"; version="2.3"; sha256="1hpvwimhkl7za5s8j9n4a8883vy89jrxrhlh0k3cfprnndh4zz05"; depends=[shiny]; }; EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; EMVS = derive2 { name="EMVS"; version="1.1"; sha256="0pxf2vy3ab5d5zbq089fl27x01yyhh7nyp3g1w4xnifwnm55lx9w"; depends=[Rcpp RcppArmadillo]; }; EMbC = derive2 { name="EMbC"; version="2.0.3"; sha256="0ns6jmshblf00n4harhls03q9c6h1wvgvjzn8jvr3kf4gm2iz2jd"; depends=[maptools mnormt RColorBrewer Rcpp RcppArmadillo sp]; }; EMpeaksR = derive2 { name="EMpeaksR"; version="0.1.0"; sha256="0lb5myzv94j0784akni3v3fmd7f42wiycjg7fm1p3rdgsgd1ql7s"; depends=[]; }; - ENMTools = derive2 { name="ENMTools"; version="1.0.3"; sha256="0m4cd2q0pws3fbjfs0q3b8ximwnifyv7cc0xwjflj3v3fc2jmqng"; depends=[dismo ENMeval forcats ggplot2 ggpubr gridExtra knitr lhs magrittr raster rgdal rgeos sp spatstat spatstat_core spatstat_geom]; }; - ENMeval = derive2 { name="ENMeval"; version="0.3.1"; sha256="1l43065mbhlrniqw3pqjz0vn7r2azkikqvm8mjiq5pky9ldhrwp7"; depends=[dismo doParallel foreach maxnet raster]; }; + ENMTools = derive2 { name="ENMTools"; version="1.0.5"; sha256="1lvvby77j3abf3gmm12091mcgijxcg7vilr2j9q3fi5n87wqhl12"; depends=[dismo ENMeval forcats ggplot2 ggpubr gridExtra knitr lhs magrittr raster rgdal rgeos sp spatstat spatstat_core spatstat_geom]; }; + ENMeval = derive2 { name="ENMeval"; version="2.0.1"; sha256="0l0223cgdbdrwv6nsywc5r7xx67l74gczak6qz9mr93hmrh7fyrg"; depends=[dismo doParallel doSNOW dplyr foreach ggplot2 glmnet magrittr maxnet rangeModelMetadata raster testthat tidyr]; }; EPGMr = derive2 { name="EPGMr"; version="1.0.0"; sha256="1ii4lccv4hyydy3sd5l7c22pgx27x3mdml20sfbdj85pmpyab6q9"; depends=[]; }; + EPP = derive2 { name="EPP"; version="0.3.2"; sha256="0h6lln3kxzhz382gpcqmyyqk4ja99i4hanwyxc3v4jk2k0rslrnn"; depends=[deldir dplyr flexclust leaflet leaflet_extras maptools osrm plyr rgdal rgeos sf sp]; }; EPT = derive2 { name="EPT"; version="0.7.5"; sha256="1llypf8600mk62cqxnwv5fds8ypfx5is2qkpbp4bh70l3s3lvj31"; depends=[]; }; - EPX = derive2 { name="EPX"; version="1.0.3"; sha256="1bq94pxl60y6km1lhi0nzsa5qfkb1gqfx3h002g2n4n0avlq928s"; depends=[doParallel doRNG foreach nnet randomForest rngtools]; }; + EPX = derive2 { name="EPX"; version="1.0.4"; sha256="0d0qddk4c835gkh4lydaypxzakjz3qw9ai7y35kbaflj08fismc6"; depends=[doParallel doRNG foreach nnet randomForest rngtools]; }; EQL = derive2 { name="EQL"; version="1.0-1"; sha256="0pa33h0f30l352m6ix296l55lvqxdaib666x2dwy9zx0lmk23w8m"; depends=[lattice ttutils]; }; - EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; + EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0.2"; sha256="08d74jm9my2p9r491v1hya7w2m9b4mf3vk812jsmrdfzdw3x47ab"; depends=[BiasedUrn]; }; ER = derive2 { name="ER"; version="1.1.0"; sha256="03kbr9dams961zqa2mn1x63wp6xbp0bnwfskbxppwy28af4wqk8v"; depends=[ggplot2 glmnet gridExtra pls plsVarSel scales]; }; ERP = derive2 { name="ERP"; version="2.2"; sha256="17i04rgfj9crnvpi7mf2spwmaw9jgw4kn5fx6x9xbl9cvwwx6q4k"; depends=[corpcor fdrtool irlba mnormt pacman]; }; ERSA = derive2 { name="ERSA"; version="0.1.3"; sha256="0djh633vmc89vl4bp7p4bazlb0pshpd2yckfj0yjk6vc9lrbql69"; depends=[broom car combinat dplyr ggplot2 leaps miniUI purrr RColorBrewer shiny tidyr]; }; @@ -1343,21 +1388,20 @@ in with self; { EValue = derive2 { name="EValue"; version="4.1.2"; sha256="0339g1034sfkqdry6mf8ly962rk2prsm9q4lszjz9yifvarzxwyr"; depends=[boot dplyr ggplot2 metafor MetaUtility]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.2.2"; sha256="19gd9grjjdv6hilqj41g5qhz7m0ga40q88clwggbp5f0f1yd5sym"; depends=[Rcpp]; }; - EWOC2 = derive2 { name="EWOC2"; version="1.0"; sha256="1x3l332pmh69kl0c1rka264mi69avdm938mzd79ck4y3qcgn07vr"; depends=[MASS rjags]; }; EWS = derive2 { name="EWS"; version="0.2.0"; sha256="0rkxnc5pwrjgm2j201rg0z4nqb75rpkqh3hff4lvw1zmnr9flm6r"; depends=[numDeriv]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; EZtune = derive2 { name="EZtune"; version="3.0.0"; sha256="1s4hdd1j352k8brbfbdyh8mw183df2n37a61rlxhswyhfrp2w877"; depends=[ada e1071 GA gbm glmnet optimx ROCR rpart]; }; - Eagle = derive2 { name="Eagle"; version="2.4.4"; sha256="190lb8xwcwqx6ww911m5qvwl17w9p6688sai3far394jaj17shxp"; depends=[data_table ggplot2 ggthemes matrixcalc mmap plotly R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; + Eagle = derive2 { name="Eagle"; version="2.4.5"; sha256="0pa1iwfm51qkk7bcx7bmsb8aak4sbn22hh4w5267gjfj3c1nin17"; depends=[data_table ggplot2 ggthemes mmap plotly R_utils Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; EasyDescribe = derive2 { name="EasyDescribe"; version="0.1.0"; sha256="0is3j7myj4vjkg5hjwd1yzwyf1y8pxyn6710rphhaw85y86ba2mh"; depends=[CATT FSA gmodels multiCA psych rcompanion trend]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; EasyMx = derive2 { name="EasyMx"; version="0.2-12"; sha256="00wj08nwv5zi5d4a1fss40f4cms4svam1hmmxvh60hvc55ygsc3z"; depends=[OpenMx]; }; EbayesThresh = derive2 { name="EbayesThresh"; version="1.4-12"; sha256="07a2dd3za2dc81n6m2xy794sclp3yw7f46lg1igaflh7m9407198"; depends=[wavethresh]; }; Ecdat = derive2 { name="Ecdat"; version="0.3-9"; sha256="112yg3v0pwssfw38nbbrrn1zrlg2h39brr79m3rdlp8hr810q92b"; depends=[Ecfun]; }; - Ecfun = derive2 { name="Ecfun"; version="0.2-4"; sha256="0qi0582yxs2bpyryv55j2wr6f20g6zchp1z9r54wakhxr3sllr50"; depends=[BMA fda jpeg MASS mvtnorm RCurl stringi TeachingDemos tis XML xml2]; }; + Ecfun = derive2 { name="Ecfun"; version="0.2-5"; sha256="0lwpgpjax149kyc9fzxdz0v4marm5agrhdgfmvm9956sslzksabj"; depends=[BMA fda jpeg MASS mvtnorm rvest stringi TeachingDemos tis xml2]; }; EcoDiet = derive2 { name="EcoDiet"; version="1.0.0"; sha256="19x2ypmsw6jnq1s0nqk3pdkwi5g3g92r6fgxrxlnyvd0jqi9l8b3"; depends=[coda ggplot2 rjags]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12.1"; sha256="075kgy6cxppkclk6nj5xs1f5yv9w8cpr09xwhf2101a6wswknb88"; depends=[DEoptim operators topmodel XML]; }; - EcoIndR = derive2 { name="EcoIndR"; version="1.6"; sha256="1pichrwny5hyb19919ldbgkdxp1s6vs03yw0x43ww13ldi314zbn"; depends=[rgeos]; }; + EcoIndR = derive2 { name="EcoIndR"; version="1.7"; sha256="1sa6207zvmbgvl060i43yzsq6nb2mqgpvm2bzg742qll6y4nh217"; depends=[rgeos]; }; EcoNetGen = derive2 { name="EcoNetGen"; version="0.2.3"; sha256="05j8m9vzkwlsw1h69s5myhbg85vyhqdxcl9r5mdwsrk9f58wajmz"; depends=[ggplot2 igraph]; }; EcoTroph = derive2 { name="EcoTroph"; version="1.6"; sha256="0zi6g0ra107s47r32mm9h6r1wll3avi0mpjmhcr0nj9y48nv14w3"; depends=[XML]; }; EcoVirtual = derive2 { name="EcoVirtual"; version="1.1"; sha256="1aryl2sb5ak390lgnm427ilm6xv9lmsjhwdnapzc033zvqb099gj"; depends=[]; }; @@ -1365,8 +1409,7 @@ in with self; { EconDemand = derive2 { name="EconDemand"; version="1.0"; sha256="1slpwiaxj7w21zdri9myrzwbwzl62m3cnp0g4fr2rkdlzgb6j5yj"; depends=[]; }; EcotoneFinder = derive2 { name="EcotoneFinder"; version="0.2.3"; sha256="1liqjakzg4c5kgjiir8i4fp4ax0737lfwriz277crh9p3jn3dgmh"; depends=[cluster colorspace corrplot e1071 ggplot2 igraph philentropy plyr purrr qgraph reshape rlang Rmisc vegan vegclust withr]; }; Ecume = derive2 { name="Ecume"; version="0.9.1"; sha256="093yx24hckgwvkdjgir33lkc7hhiv4is8a4a7fdcrp46iszx0b4i"; depends=[caret dplyr e1071 kernlab magrittr pbapply spatstat spatstat_geom transport]; }; - EdSurvey = derive2 { name="EdSurvey"; version="2.6.9"; sha256="022bir08fjrf1qq2hs5wbblybbaq3dgzwk6hg997vvkpyg2vzsnn"; depends=[car data_table Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPprimer quantreg readxl tibble wCorr WeMix xtable]; }; - EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.6"; sha256="1hpm198awl30i7vbg1jk578s2i3f2kskirb33xvampcwn8mz0nhh"; depends=[editrules igraph Rcpp]; }; + EdSurvey = derive2 { name="EdSurvey"; version="2.7.0"; sha256="0cpiamk7bac8z76l985lrgkfh09mzw3m74j68gs8kbdx3g6p6sfs"; depends=[car data_table Dire Formula glm2 haven LaF lfactors lme4 MASS Matrix NAEPirtparams NAEPprimer quantreg readxl tibble wCorr WeMix xtable]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-4"; sha256="17mhp4acj0myr2b54hgbb3wi5j6a6q999nqr9lwcbx3plyrwlljl"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; EffectStars = derive2 { name="EffectStars"; version="1.9-1"; sha256="131w5bdc615gaa2czi4wyc2f96jcg24ahcmggajrvyhxmi6rag5x"; depends=[VGAM]; }; EffectStars2 = derive2 { name="EffectStars2"; version="0.1-3"; sha256="0yh4krqjh1jb7gjxb9z4f5bzarps0g9jfqbbva782a881dhcdl1x"; depends=[miscTools VGAM]; }; @@ -1376,11 +1419,10 @@ in with self; { EigenR = derive2 { name="EigenR"; version="1.0.0"; sha256="173yfqipha8g6m4djkgxki8wlys72xq9cpj7zir9r5lwfkygdzfc"; depends=[Rcpp RcppEigen]; }; EleChemr = derive2 { name="EleChemr"; version="1.2.0"; sha256="1wr2lkaf56qxsnqi7mgbgzy72lhkr0xlr1w1l9hy1dpmmqcqw7l3"; depends=[ggplot2]; }; EloChoice = derive2 { name="EloChoice"; version="0.29.4"; sha256="1g8ivvnv16c2gniwd9xa9z89bm4rac0nrg3mcg1risgf9yk4rgm5"; depends=[psychotools Rcpp RcppArmadillo Rdpack]; }; - EloOptimized = derive2 { name="EloOptimized"; version="0.3.0"; sha256="185vh8h6r5wqcbaq3glq8k3fr8jp6h3q2h2ly54agi6bi3fvbs05"; depends=[BAMMtools dplyr lubridate magrittr reshape2 rlang rlist]; }; + EloOptimized = derive2 { name="EloOptimized"; version="0.3.1"; sha256="09bg1gm8jhjj0r7yzdgi2zlyavrizgiljwh26mpb6ng6p5mkliid"; depends=[BAMMtools dplyr lubridate magrittr reshape2 rlang]; }; EloRating = derive2 { name="EloRating"; version="0.46.11"; sha256="09nh3ia4s3c9yjhw0f0haqb26fryfc4lf9rgfcbqqzzwgdr1invj"; depends=[network Rcpp RcppArmadillo Rdpack sna zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; EmbedSOM = derive2 { name="EmbedSOM"; version="2.1.1"; sha256="1w61dni4vsglxqdhwdy5dcmzb6hx1wb9fhfki8wmal1yaza23ljy"; depends=[FNN ggplot2 igraph Matrix Rtsne umap uwot]; }; - EmiStatR = derive2 { name="EmiStatR"; version="1.2.2.0"; sha256="0xwmwbybiyb9688l5n98vir3rwbbjgpw5qb25p20lhlj1pqg95w1"; depends=[doParallel foreach lattice xts zoo]; }; EmissV = derive2 { name="EmissV"; version="0.665.5.2"; sha256="056xg4gmjwykgjzd5x21blkvwprfw8yl8rw8h1ym0kp1cljy2qdm"; depends=[data_table ncdf4 raster rgdal sf sp units]; }; EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="2.1.0"; sha256="0r65a34lj5k7vp9kxnhf9rnwpjs85331wqp6laxizvyjs5dlfplf"; depends=[ggplot2 gridExtra rlang]; }; EncDNA = derive2 { name="EncDNA"; version="1.0.2"; sha256="0wy2cmcvyqjhg5mqbvdzmihfv8swx7ym2n9mjdqgx0kgnc7k614y"; depends=[Biostrings]; }; @@ -1396,22 +1438,23 @@ in with self; { EntropyMCMC = derive2 { name="EntropyMCMC"; version="1.0.4"; sha256="065djml9dmn5ahbgaljnshvhziwg61xciq6fzh76449x3wy6bg65"; depends=[mixtools RANN]; }; EnvCpt = derive2 { name="EnvCpt"; version="1.1.3"; sha256="1zv2x3svlqrfchr9j4bk2w2sx75zl4886pqk1c1sx5glqrkdbfki"; depends=[changepoint MASS zoo]; }; EnvExpInd = derive2 { name="EnvExpInd"; version="0.1.0"; sha256="063f3c10a7k9j3f85xilj1s6dd9ky5sw8sbvhzkhg5hg92c9dpns"; depends=[dplyr gstat maptools RCurl sp stringi zoo]; }; + EnvNJ = derive2 { name="EnvNJ"; version="0.1.2"; sha256="13m539xxqpiq0l718vhn4mdqv5a7f3xiqvp396gzpjn1l390rhlx"; depends=[ape bio3d stringr]; }; EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; }; EnvStats = derive2 { name="EnvStats"; version="2.4.0"; sha256="0505j1hh1xky6hm2i8m22pkw62ql7plkxn0v0bcb6dr085v9wia9"; depends=[ggplot2 MASS nortest]; }; EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; Epi = derive2 { name="Epi"; version="2.44"; sha256="1wcxr1f7irgfdwzz4vf67114yhxrhxxxnhy4hfaww0zy91vzxx10"; depends=[cmprsk data_table dplyr etm MASS Matrix mgcv numDeriv plyr purrr survival zoo]; }; - EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.15.0"; sha256="1ghpvdfwqcxx4gnn6nfkik6bvdk7xnlrkljlqgzd4rdqlxg4gdq1"; depends=[]; }; - EpiCurve = derive2 { name="EpiCurve"; version="2.4-1"; sha256="028yvxf5zmby7m5xwklhx1xrn9yw3dqhwddg03jq42vpjngds1b6"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales tibble timeDate]; }; + EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.16.0"; sha256="025zv1mskd3s71bn0fbaf88b36a5rmbpplv6lmiyp8rxrfk05vs9"; depends=[]; }; + EpiCurve = derive2 { name="EpiCurve"; version="2.4-2"; sha256="1z81zrg96hmgj2j37vwwg0bd84bq80ck3f704w9j6v0drckzh03j"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales tibble timeDate]; }; EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.1"; sha256="0m6yay3r7dqih19f76wxwgq6dh9p1zmp5d9ilj9nd262q61jcy53"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="2.2-4"; sha256="12zv1mlb0gqsvff1s0fvqgxqk42c7y9gz3h94mjmf1wbmhsjcqnf"; depends=[coarseDataTools coda fitdistrplus ggplot2 gridExtra incidence reshape2 scales]; }; EpiILM = derive2 { name="EpiILM"; version="1.5.2"; sha256="0drs4qywx9axs7k5qk7sp5r3g8pykn4lqqbm0hxyl24r6b5l3d6b"; depends=[adaptMCMC coda LaplacesDemon]; }; - EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.6"; sha256="0qhpmh28zmgqnsyfxgv06g2slix12nn2pglgpvagx2q40rs4fann"; depends=[coda igraph]; }; - EpiModel = derive2 { name="EpiModel"; version="2.0.3"; sha256="1nsrgnabl41cpp9c4lsajgkynxbvbqvdihbdzzkwxkaad40b86p8"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm tergmLite]; }; + EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.7"; sha256="1yjcjxf5m1qbb6p09g34wkr4q13g65ly11kxh95r22cdl85jmlq3"; depends=[coda igraph]; }; + EpiModel = derive2 { name="EpiModel"; version="2.1.0"; sha256="1vhbjrxj3q8xkin44m576rkjsl5qw5c8hxwqmjj4n8fjk9xyj20r"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer statnet_common tergm tergmLite]; }; EpiNow2 = derive2 { name="EpiNow2"; version="1.3.2"; sha256="1rcyhk0f18asrym9zd7hr5ss7aw2dd2m5wrjcsqkr8q7x6apwh3g"; depends=[BH cowplot data_table futile_logger future future_apply ggplot2 lifecycle lubridate patchwork progressr purrr R_utils Rcpp RcppEigen rlang rstan runner scales StanHeaders truncnorm]; }; - EpiReport = derive2 { name="EpiReport"; version="1.0.1"; sha256="1h3zpa5gn8siz4mnhbqf5qwdzywwlia2n1lqyhfjbjw6x2lxjv7i"; depends=[dplyr flextable ggplot2 officer png tidyr tidyselect zoo]; }; + EpiReport = derive2 { name="EpiReport"; version="1.0.2"; sha256="1dh9rjdjgmwzvfslzgnmd37ipj7ydbn4pnngz4sw7nknqy7r4dpx"; depends=[dplyr flextable ggplot2 officer png tidyr tidyselect zoo]; }; EpiSignalDetection = derive2 { name="EpiSignalDetection"; version="0.1.1"; sha256="04bagnx9fs0r3167hmwgc389fl5hq7l4j6kdjjmi360vcaimx9qi"; depends=[dplyr DT ggplot2 ISOweek knitr pander rmarkdown shiny surveillance]; }; - EpiStats = derive2 { name="EpiStats"; version="1.4-1"; sha256="1i9ymqf0p8wplbmbq4j0ixprjvg22l4z05imxhfj087p3p2sqq8w"; depends=[dplyr epiR]; }; + EpiStats = derive2 { name="EpiStats"; version="1.5-1"; sha256="0swxww4x0qqlby4m8xw58jr5x2ml5z896m8w0f1v0mr7kf1v6fpi"; depends=[dplyr epiR]; }; EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; }; Eplot = derive2 { name="Eplot"; version="1.0"; sha256="1glmkjjj432z9g4gi56pgvfrm5w86iplirnd5hm4s99qci2hgc64"; depends=[]; }; Equalden_HD = derive2 { name="Equalden.HD"; version="1.2"; sha256="1lwqnm2xg7x79xajjb4fx5b5yaqs0rn8myb2h52pfgm0v37lzvmb"; depends=[]; }; @@ -1424,11 +1467,12 @@ in with self; { EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.3.1"; sha256="06ihyiq9dw7yg8qpq3yckpd0jk4gjajgvavbj302sj0qssrxgyzh"; depends=[dplyr ggplot2 igraph qgraph]; }; EstimationTools = derive2 { name="EstimationTools"; version="2.1.0"; sha256="1dpn4jb746ax3s7p7hkrk85hkxjayxp641vxbfp155v0m2gr8ar2"; depends=[autoimage BBmisc boot DEoptim matrixStats numDeriv Rdpack stringr survival]; }; EthSEQ = derive2 { name="EthSEQ"; version="2.1.4"; sha256="0bffms4d7bg516kma1hcyg8y4czjmz5vizcshh3g990wimmqcwb1"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; + EuclideanSD = derive2 { name="EuclideanSD"; version="0.1.0"; sha256="1w5s1zkb81v150nvaygvyla2x0vh4c99vd5jw53jcq68sv9hby3i"; depends=[shiny]; }; Eunomia = derive2 { name="Eunomia"; version="1.0.1"; sha256="06a42qsf3nx1pbynikkdvmbhh1rmgnfmiggdn86b3a0ij6cq0p2r"; depends=[DatabaseConnector RSQLite SqlRender]; }; EurosarcBayes = derive2 { name="EurosarcBayes"; version="1.1"; sha256="12311s6ibw9q6kykhh689r93r7mwjhwrhkzdpc75grvw6ilgjmpm"; depends=[clinfun data_table plyr shiny VGAM]; }; EvCombR = derive2 { name="EvCombR"; version="0.1-2"; sha256="1f5idjaza91npf64hvcnpgnr72mpb7y6kf91dp57xy9m14k7jx5g"; depends=[]; }; EvalEst = derive2 { name="EvalEst"; version="2021.2-1"; sha256="0ws7x0dkzb3h2m801dkzx2as146whm63mcipy4iia90jd9944zir"; depends=[dse setRNG tfplot tframe]; }; - EvaluateCore = derive2 { name="EvaluateCore"; version="0.1.1"; sha256="03y2sbpca11gjn94kn03y5ahamhhnwfisnpaxi23k124wq09dgch"; depends=[agricolae car cluster dplyr entropy ggcorrplot ggplot2 gridExtra kSamples psych Rdpack reshape2 vegan]; }; + EvaluateCore = derive2 { name="EvaluateCore"; version="0.1.2"; sha256="0yqv5srnbczdx8h3cxvj6hfas0436xc8hz698zi7ypms34r9c1ly"; depends=[agricolae car cluster dplyr entropy ggcorrplot ggplot2 gridExtra kSamples mathjaxr psych Rdpack reshape2 vegan]; }; EvaluationMeasures = derive2 { name="EvaluationMeasures"; version="1.1.0"; sha256="0b65y4rb650hhlgc18z0sm0danrrawqkazzdl9krl877djrgx87g"; depends=[]; }; Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.15"; sha256="1hvvlc8qwgal4lhlccf4dk817xgpyyiqzzlzk7w3ydnczr8pk4bk"; depends=[zoo]; }; EventDetectGUI = derive2 { name="EventDetectGUI"; version="0.3.0"; sha256="02gwgbp692cfmf933jg1f7h4gghhc1v2cswz7rpcazm8h39mc4wh"; depends=[DT EventDetectR ggplot2 plotly shiny shinyBS shinydashboard shinyjs XML]; }; @@ -1442,30 +1486,33 @@ in with self; { EwR = derive2 { name="EwR"; version="1.4"; sha256="1i0cwyylr1lqilykn1q2y1ad2gawfqkw9c51g04yn061c623pkam"; depends=[]; }; ExPanDaR = derive2 { name="ExPanDaR"; version="0.5.3"; sha256="1y4ccyvlvdx9lcgpyns6k2npc0rzwk8db4bmbi3pq9xmv7ycgmcz"; depends=[corrplot dplyr DT ggplot2 kableExtra lmtest multiwayvcov openssl plm rio rlang scales shiny shinycssloaders stargazer tictoc tidyr zip]; }; ExPosition = derive2 { name="ExPosition"; version="2.8.23"; sha256="0x9400ggmgrnaish0cfgnyvw549g4ibfv9aj6vzq7j68n58vq405"; depends=[prettyGraphs]; }; - Exact = derive2 { name="Exact"; version="2.1"; sha256="0clzxgqc7a112vaw7qy66kldj7spmj4ni5fvdhwxkn54749jk388"; depends=[rootSolve]; }; + Exact = derive2 { name="Exact"; version="3.0"; sha256="0acm01njg3arlzwknv5v1sdsz5ab0bdh04sn1bmf91hcg3li8qd7"; depends=[rootSolve]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; ExactMultinom = derive2 { name="ExactMultinom"; version="0.1.2"; sha256="1ygsiwcsmda0pbp7lzr03sb461mr9fff7hxp1lil40y9z0xgdmmb"; depends=[Rcpp]; }; - ExamPAData = derive2 { name="ExamPAData"; version="0.3.0"; sha256="1bfhg5plnjmsk419pc3691d45zsh73m5v906nkdw5l3i6140gsqj"; depends=[]; }; + ExamPAData = derive2 { name="ExamPAData"; version="0.4.0"; sha256="1x901nf78hrb2124d894jwp65gr8bfrp4h161czwgx5a2zikn2f6"; depends=[]; }; ExceedanceTools = derive2 { name="ExceedanceTools"; version="1.2.2"; sha256="084sc6pggfbcyavhfnd5whyigw7dyjhb4cxmxi0kh2jiam5k8v5b"; depends=[SpatialTools splancs]; }; ExcelFunctionsR = derive2 { name="ExcelFunctionsR"; version="0.1.4"; sha256="1j3vfvfk8lp46zb6fwvq9lafk7r2qrnx4vxyhaih71c0a8g6dz9n"; depends=[lubridate plyr roperators stringr tidyr]; }; ExcessMass = derive2 { name="ExcessMass"; version="1.0"; sha256="1z8l1lja02wxw8l72s3bq6sgjymn5929n123xk6b7ndd52zlfgf5"; depends=[]; }; ExhaustiveSearch = derive2 { name="ExhaustiveSearch"; version="1.0.1"; sha256="1wb3bf1ilml5cilm740rh8ngiybxhxg6h6nzh1rlqd6wgfp17mzh"; depends=[Rcpp RcppArmadillo]; }; ExomeDepth = derive2 { name="ExomeDepth"; version="1.1.15"; sha256="1ljswn8bimzhl7dxy7nb2jmwq9v7vpp4y1jynp8djrjpdx9wnaqi"; depends=[aod Biostrings dplyr GenomicAlignments GenomicRanges IRanges magrittr Rsamtools VGAM]; }; + ExpAnalysis3d = derive2 { name="ExpAnalysis3d"; version="0.1.0"; sha256="0ragi84ms5fws58xm951qk3wczqg5czx7yvif911hmzp5x8d05gk"; depends=[crayon fields magrittr plotly]; }; ExpDE = derive2 { name="ExpDE"; version="0.1.4"; sha256="0yjsap92dd1sb23fhw69i0ddk3lyj5f4kwp9rvz4k0vxry10hx7g"; depends=[assertthat]; }; ExpDes = derive2 { name="ExpDes"; version="1.2.1"; sha256="05zc3118fx94m8il26riybp8skmyrawpvwfxa42bwwns0h9wa1zj"; depends=[stargazer]; }; ExpDes_pt = derive2 { name="ExpDes.pt"; version="1.2.1"; sha256="1xnplnm7pxyda9wipr9rc6rdb433vcqdh17fi5jz9s9v2s0sdy7d"; depends=[stargazer]; }; + ExpImage = derive2 { name="ExpImage"; version="0.2.0"; sha256="1b2g3ijb0kilksaxqskfmixbw921gn3kvg7pji7d92dsqz85s3yy"; depends=[crayon EBImage]; }; ExpRep = derive2 { name="ExpRep"; version="1.0"; sha256="0spv3wd9c8sr338n5kdzrs28yh7s90fl70wsdnkibmlxhnh3ay3g"; depends=[]; }; ExpertChoice = derive2 { name="ExpertChoice"; version="0.2.0"; sha256="1pd4v240ywc4wzh249axxb4kz5dccizc08jdjnaygz35hjdg5hvj"; depends=[DoE_base dplyr far purrr rlist]; }; ExplainPrediction = derive2 { name="ExplainPrediction"; version="1.3.0"; sha256="14m3b9fsrpfpr8avsnhl8b3bzk2xlhwgkwag5iq8bj7bzvv4yck1"; depends=[CORElearn semiArtificial]; }; ExtDist = derive2 { name="ExtDist"; version="0.6-4"; sha256="006q9xahq5zk7s6yc44ihjkr6cnjzp10pgw47zyk1rk81pjblzp3"; depends=[numDeriv optimx]; }; ExtMallows = derive2 { name="ExtMallows"; version="0.1.0"; sha256="0903jslp74s1vzbklq88y2dm0dgkhd6g77b7aipxam98933k0hzz"; depends=[]; }; ExtractTrainData = derive2 { name="ExtractTrainData"; version="9.1.5"; sha256="132f43mk2mjsfv9pfhj1371b4vxnqmnj5lf8xvfznf57xjna7wp1"; depends=[raster rgdal rgeos sp]; }; - ExtremalDep = derive2 { name="ExtremalDep"; version="0.0.3-3"; sha256="0svl7szscv1blgi2vh4kaqclg95sn871hk650bym2vdkjljy6x2x"; depends=[CompRandFld copula evd fda gtools mvtnorm nloptr numDeriv quadprog rlist sn]; }; + ExtremalDep = derive2 { name="ExtremalDep"; version="0.0.3-4"; sha256="0q25m2wp2rps5qlzcqg0wdam2yv73nny1l31bp2dmszjjirqcq6n"; depends=[CompRandFld copula evd fda gtools mvtnorm nloptr numDeriv quadprog sn]; }; ExtremeBounds = derive2 { name="ExtremeBounds"; version="0.1.6"; sha256="12bc4mmkmggvk3kfmz6nq13fa2470z0bx8smnvq9vf1ypdiiw85y"; depends=[Formula]; }; ExtremeRisks = derive2 { name="ExtremeRisks"; version="0.0.4"; sha256="1mvkrwyj9kwg35dzm9jzx311qqd4v3nnbrr6d64x476ni4pnrbl8"; depends=[copula evd mvtnorm plot3D pracma tmvtnorm]; }; FABInference = derive2 { name="FABInference"; version="0.1"; sha256="0d11vxxa0mry735n7an8n97wmxyffsj4hirxlysljs941zhkhhw4"; depends=[MASS]; }; FACTMLE = derive2 { name="FACTMLE"; version="1.1"; sha256="0qz2i0hnn84bpps1h8jmfkgp5p59axr0wayj9dvl839radrvpqvy"; depends=[rARPACK]; }; FADA = derive2 { name="FADA"; version="1.3.5"; sha256="0srv3rghbkgyxbcjc1v68c5qgcir1d618skpc8imfmdaz9pnxchn"; depends=[corpcor crossval elasticnet glmnet MASS matrixStats mnormt sda sparseLDA]; }; + FAIRmaterials = derive2 { name="FAIRmaterials"; version="0.0.2"; sha256="169hcwjm0plhkqbhz3b5cqgc2nnkibn94cimrs39sn9z62radb7x"; depends=[dplyr glue stringr]; }; FAMILY = derive2 { name="FAMILY"; version="0.1.19"; sha256="1912l2zj2cmh8yx8lkg8fpgvfddn6wbi1vrr4yx04mh73gk1s5mk"; depends=[pheatmap pROC]; }; FAMT = derive2 { name="FAMT"; version="2.5"; sha256="0mn85yy9zmiklfwqjbhbhzbawwp2yqrm9pvm8jhasn9c3kw1pcp2"; depends=[impute mnormt]; }; FAMoS = derive2 { name="FAMoS"; version="0.3.0"; sha256="14gr9wv9bpibk0rrzzwijvdncx1fgnpbv55nqzbb4jhq7fdckmsa"; depends=[future R_utils]; }; @@ -1479,8 +1526,9 @@ in with self; { FBN = derive2 { name="FBN"; version="1.5.1"; sha256="0723krsddfi4cy2i3vd6pi483qjxniychnsi9r8nw7dm052nb4sf"; depends=[]; }; FCGR = derive2 { name="FCGR"; version="1.0-0"; sha256="015nnnc9fasx0qjrc3lbxv14rqwyx36xzsw9076grwm5pqahrdsb"; depends=[kerdiest KernSmooth MASS mgcv nlme pspline sfsmisc]; }; FCMapper = derive2 { name="FCMapper"; version="1.1"; sha256="1yjh8rs65nqslvwv7x4rif469zds41s7v3vhq6pca1y17kvj2in1"; depends=[igraph]; }; - FCPS = derive2 { name="FCPS"; version="1.2.7"; sha256="0rkswfz0biyag5nh4fn0i7fa40ph198bpxaxrkrfx6bbrp12qa0q"; depends=[DataVisualizations ggplot2 mclust]; }; + FCPS = derive2 { name="FCPS"; version="1.3.0"; sha256="0cz04pjhps7grnvx50gnpmhlp4rvl9xx1dnsabn2pg075y5r5bgk"; depends=[DataVisualizations ggplot2 mclust]; }; FCSlib = derive2 { name="FCSlib"; version="1.3.0"; sha256="1191ba6dwpakcdnbcq61zm5xq24isxjnn98nmvk67fpf1ycw70w9"; depends=[bitops fields stringr tiff]; }; + FCVAR = derive2 { name="FCVAR"; version="0.1.1"; sha256="1vnfy3485mm29w0hzkmpr50yc9prmgha9hxxb7k9b9li3pzyhl17"; depends=[fracdist pracma]; }; FD = derive2 { name="FD"; version="1.0-12"; sha256="0xdpciq14i8rh7v6mw174hip64r7mrzhx7gwri3vp9y7a1380sbi"; depends=[ade4 ape geometry vegan]; }; FDRSeg = derive2 { name="FDRSeg"; version="1.0-3"; sha256="0dh6m5vlx664kryh56jzi3zxydjwa5217nhbwn6adp0q5qdh6d8a"; depends=[Rcpp stepR]; }; FDRestimation = derive2 { name="FDRestimation"; version="1.0.0"; sha256="1m4k71bsfj2sbsnyqi1s9p5wxbvvn24w98lqwms6z4irc0sk6r3g"; depends=[Rdpack]; }; @@ -1493,7 +1541,7 @@ in with self; { FESta = derive2 { name="FESta"; version="1.0.0"; sha256="1kf5iqw8x8079gjaxicrgax5l798l8hxcc5y83l5pqh0ync5bxm6"; depends=[]; }; FEprovideR = derive2 { name="FEprovideR"; version="1.1"; sha256="02hfdk9qhaq4y19p700w2i7qsdp4z2kyww0pr0pijfivkqks0vpi"; depends=[ggplot2 Matrix poibin]; }; FFD = derive2 { name="FFD"; version="1.0-8"; sha256="0kb654pvb0z0zpf88yc3dkd8n3qfiqjhdmv9rk5y06f2hjydn0i3"; depends=[R2HTML]; }; - FFdownload = derive2 { name="FFdownload"; version="1.0.5"; sha256="0fs4bdwr9xhzlvkrjmcfkifkgqlmklp7l5297ahb7acg65h7yawn"; depends=[plyr rvest xml2 xts zoo]; }; + FFdownload = derive2 { name="FFdownload"; version="1.0.6"; sha256="1n5mmx7mgdfbxqqgv1hv3l9z7vwykp17r1ca9l7d8jcwslygbbyz"; depends=[plyr rvest xml2 xts zoo]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; }; @@ -1506,35 +1554,35 @@ in with self; { FKF = derive2 { name="FKF"; version="0.1.7"; sha256="1s3qilbkmdfsxcc0vj4yv8jyh8gl9i9rq9f8xb8wiycccpzx119v"; depends=[]; }; FKF_SP = derive2 { name="FKF.SP"; version="0.1.2"; sha256="0np74ssq6q293mkhjag1fbbyzawlbf3pq7sdfs74b7b3dlk9450i"; depends=[curl mathjaxr Rdpack]; }; FKSUM = derive2 { name="FKSUM"; version="0.1.4"; sha256="02nicfw0wcprdg0p2p44g740j6bjf6xgzjxcvyfcbcsbr6bpjknx"; depends=[MASS rARPACK Rcpp RcppArmadillo]; }; - FLAME = derive2 { name="FLAME"; version="2.0.0"; sha256="067yy0b668pj25a0jscpjb98in22048vxs249a7pa4rs2c1cyai9"; depends=[devtools dplyr glmnet gmp magrittr mice rlang tidyr xgboost]; }; + FLAME = derive2 { name="FLAME"; version="2.1.0"; sha256="0sq8v7najcqwqc9fxp05mmqa09niqjc7ypf4b3jdpmng1srpf643"; depends=[glmnet gmp]; }; FLLat = derive2 { name="FLLat"; version="1.2-1"; sha256="0306bpwp2az4x4m5sv88hlh7vs0y5isfby7lxrn2gjnk76gg6mw1"; depends=[gplots]; }; FLR = derive2 { name="FLR"; version="1.0"; sha256="0k50vi73qj7sjps0s6b2hq1cmpa4qr2vwkpd2wv2w1hhhrj8lm0n"; depends=[combinat]; }; FLSSS = derive2 { name="FLSSS"; version="8.6.6"; sha256="0kw28zmvgdy4zmj2vnrs84n0rg6jvqj3x8f3ihjjkzkwqrqyiia9"; depends=[Rcpp RcppParallel]; }; - FLightR = derive2 { name="FLightR"; version="0.5.0"; sha256="00walvfjf2rr308mv4v3734qad4i1sgv0mwjldgpgjq077h4xw38"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme raster RcppArmadillo rgdal rgeos sp truncnorm]; }; + FLightR = derive2 { name="FLightR"; version="0.5.1"; sha256="14188r6kk194ir0l8byaqlly4lsg8w58lw5xx2s4abyhbn35kwq8"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme RcppArmadillo rgdal rgeos sp truncnorm]; }; FMAdist = derive2 { name="FMAdist"; version="0.1.0"; sha256="0aa4sw93ia6cp386hrq6x448x4w0p6k198rjaqs474j25gqgxrv0"; depends=[EnvStats extraDistr fitdistrplus MASS quadprog STAR]; }; FMC = derive2 { name="FMC"; version="1.0.0"; sha256="1pfqxx7slgcmw4al7i8hy59f4han6b0b7b5az7yh1mscdnghl9bj"; depends=[minimalRSD]; }; FMCCSD = derive2 { name="FMCCSD"; version="1.0"; sha256="0c50km5ba6biq9p3mycxhy00ij2gr6y5zf3q8ycq0g1mbk8ybfb7"; depends=[numDeriv orthopolynom Rcpp RcppArmadillo splines2]; }; FME = derive2 { name="FME"; version="1.3.6.1"; sha256="065y6r0cwvj1q5i3f88icdf4i47bz33hbhln42gyzqhlavvnj35f"; depends=[coda deSolve MASS minpack_lm minqa rootSolve]; }; - FMM = derive2 { name="FMM"; version="0.1.2"; sha256="1sxwkxwj8n68fvq69is9nb7n63h1csdsgdanbdpb8jzyww39h28h"; depends=[doParallel foreach iterators]; }; + FMM = derive2 { name="FMM"; version="0.3.0"; sha256="0kvan4yy7nx8bxabr9cjhxqvs7f522d0agkzypzdv0g6w217zsnd"; depends=[doParallel foreach iterators rlang]; }; FMP = derive2 { name="FMP"; version="1.4"; sha256="0w11a78nz4n7zih9h00xkv7prsy9hlxphbpa7hpnbvq9r98g08qm"; depends=[]; }; FMStable = derive2 { name="FMStable"; version="0.1-2"; sha256="00viigpqfbqc4hyl9cwicbwqf2ksjak28qrqaa16jhbqz93j4fck"; depends=[]; }; FMradio = derive2 { name="FMradio"; version="1.1.1"; sha256="02d5imhagkr2cwgs6r77mbd2jg8k5ga17xp3rwaryykg2k4glacs"; depends=[Biobase expm ggplot2 MASS reshape]; }; FMsmsnReg = derive2 { name="FMsmsnReg"; version="1.0"; sha256="0d58n7lz8d6xgzvyznmhw1byshyiiwk8dc462qr18cl51p0lqnkv"; depends=[mvtnorm]; }; FNN = derive2 { name="FNN"; version="1.1.3"; sha256="0cllqlnynm5yaj4r64mqyyfc8phkb38rwssq8k8ikgfgr4jklxny"; depends=[]; }; FOCI = derive2 { name="FOCI"; version="0.1.3"; sha256="0iax5569a0v18j2l52mw26yimx11fqqbxj5q7jgba9jf7ylp410w"; depends=[data_table gmp proxy RANN]; }; - FORTLS = derive2 { name="FORTLS"; version="1.0.2"; sha256="0z5qb7zvgbrb52jwf59qialkc1b3qi0pp9rdsyij9wphgwi6vw06"; depends=[dbscan Distance ggvoronoi htmlwidgets lidR plotly progress raster Rcpp RcppEigen scales sp tidyr vroom]; }; + FORTLS = derive2 { name="FORTLS"; version="1.0.3"; sha256="0awc485r5vzxmd966gp4qrjqmiv4mvq7bfd5sa9s75vdvzcwvxf1"; depends=[dbscan Distance ggvoronoi htmlwidgets lidR moments plotly progress raster Rcpp RcppEigen scales sp tidyr vroom]; }; FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; FPCA3D = derive2 { name="FPCA3D"; version="1.0"; sha256="1hrk9caad2s76dx59clxhia45a85khk1y2ii7955f336x55q34a5"; depends=[]; }; - FPDclustering = derive2 { name="FPDclustering"; version="1.4.1"; sha256="19n6fx3fyvnlwh8w8bi8ki3wfmvzdlxl557cj3a9y1wmm3fv2drz"; depends=[cluster ExPosition mvtnorm rootSolve ThreeWay]; }; + FPDclustering = derive2 { name="FPDclustering"; version="2.0"; sha256="04anczbml5mpxi65qalafs5q4pign6abhqsc2birvvg23r3hhhfh"; depends=[cluster ExPosition GGally ggplot2 klaR MASS mvtnorm rootSolve ThreeWay]; }; FPV = derive2 { name="FPV"; version="0.5"; sha256="0pxa8lbcxw2hx2n0frkx0pdndlcfm7gnh9qay9q53cf5gqzzwvvc"; depends=[FuzzyNumbers FuzzyNumbers_Ext_2]; }; FRACTION = derive2 { name="FRACTION"; version="1.0"; sha256="0g25dzsbharsq8bzfka96zccaqppdclax24mz5m080ddg4y8zj49"; depends=[]; }; FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; }; FRCC = derive2 { name="FRCC"; version="1.0"; sha256="1g1rsdqsvwf7wc16dj16y6r0347j8jsv5l1pxvj1h0579zinaf2b"; depends=[calibrate CCP corpcor MASS]; }; FREEtree = derive2 { name="FREEtree"; version="0.1.0"; sha256="1i2liqbcg993snj5vq341mmafzhn1yrwljvx4f3kyzy0pa59k6rn"; depends=[glmertree MASS pre WGCNA]; }; FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; - FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.3.0"; sha256="069pj6x4prlzg43q9ag8dl822awz3plk5020x13fv77jmyzq6srb"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; - FRK = derive2 { name="FRK"; version="1.0.0"; sha256="0a2zcxzsqb38a2br8ank136hzvq8mrjcm82gds090bxnw8smk2bi"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; - FSA = derive2 { name="FSA"; version="0.8.32"; sha256="02ksm98kd9a6b3jj3z6k99sq268r89dyq1q7mffx5zw96yv41yyj"; depends=[car dplyr dunn_test lmtest plotrix plyr sciplot withr]; }; + FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.3.1"; sha256="1d8ya1pqy1zc9hxp7s211n0wa3n63jgpxh5ngysbh0dn488l8vgg"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; + FRK = derive2 { name="FRK"; version="2.0.0"; sha256="0zj49xynvjglyzab73ywjpgmgki9i2i8np3xkqh2123nn186ymxd"; depends=[digest dplyr ggplot2 ggpubr Hmisc Matrix plyr Rcpp RcppEigen reshape2 scales sp spacetime sparseinv statmod TMB]; }; + FSA = derive2 { name="FSA"; version="0.9.1"; sha256="19acr6cwy4qh78d0zyawwrpkl6kkv88bqzyz4a40b3ajyg69cqbn"; depends=[car dplyr dunn_test lmtest plotrix sciplot withr]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.8"; sha256="0i7wkz0baxcf1dv6qvc891b4ja4x65p4qicil472k6a9gcf5d4qm"; depends=[]; }; FSDAM = derive2 { name="FSDAM"; version="2020.11-18"; sha256="09l7zvmbvmbcr5pxizdhs5fn79r6cl4ic0hsz2bazdymsqv3s3nm"; depends=[kyotil reticulate]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; @@ -1566,7 +1614,7 @@ in with self; { FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; FastCUB = derive2 { name="FastCUB"; version="0.0.2"; sha256="04bphkfkkjp7gfnsgar5gcxzmkr437mz6y8mbf015m7f4cvdhzjz"; depends=[CUB Formula]; }; FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; }; - FastGaSP = derive2 { name="FastGaSP"; version="0.5.1"; sha256="09dymlchc4ij5iwwi2hl7shlqr8610lv7r2qh3sbrh7j5vnr5sc9"; depends=[Rcpp RcppEigen RobustGaSP]; }; + FastGaSP = derive2 { name="FastGaSP"; version="0.5.2"; sha256="1i54gxnc27fjgdbcrf2n1s5p6jgadcz2v4g0hq4xay0kfr593a7g"; depends=[Rcpp RcppEigen RobustGaSP]; }; FastHCS = derive2 { name="FastHCS"; version="0.0.7"; sha256="0l3fi3siwg2jhsj0jbhgccx8pnwd8h8f4z37g1najb41hw8dwn8d"; depends=[matrixStats Rcpp RcppEigen]; }; FastKM = derive2 { name="FastKM"; version="1.0"; sha256="0sqxd2pg9y6yn1lnxni32ca3bgbmz04k9z37q9pzgijvf9qvik3f"; depends=[rARPACK]; }; FastKNN = derive2 { name="FastKNN"; version="0.0.1"; sha256="1iz8ybzkvbyqwb00s7cp1zvy9xlmyjid441mf62dq08a0zncnyss"; depends=[assertthat pdist]; }; @@ -1581,11 +1629,15 @@ in with self; { FcircSEC = derive2 { name="FcircSEC"; version="1.0.0"; sha256="06c1n0xx1q0zh16bgylwbvqzp8q4c5bj626shm2c6r8f9kcjgysh"; depends=[Biostrings seqRFLP stringi]; }; FeaLect = derive2 { name="FeaLect"; version="1.20"; sha256="1dfi0v313x4a4ck98zlk6yr3nfjrdwr5649x9dx3i7yfkypk2k5c"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.4"; sha256="00yrji3grqgzg8c1hwqq5kb9xgqlnzwymy0b38cwixadc5w5lq8m"; depends=[BH digest magrittr Matrix Rcpp]; }; + FeatureImpCluster = derive2 { name="FeatureImpCluster"; version="0.1.4"; sha256="19xbfb8lbki5cs95nqc32wri7mjcmb8rwf0rj48pc3bh8bxzq53q"; depends=[data_table ggplot2]; }; + FeatureTerminatoR = derive2 { name="FeatureTerminatoR"; version="1.0.0"; sha256="036ip8jm4d5ybyqmvrnjqp4hl8gsmd346737ghipnmmyaml9xfs5"; depends=[caret dplyr e1071 ggplot2 lattice randomForest tibble]; }; FedData = derive2 { name="FedData"; version="2.5.7"; sha256="07qgqhd3pg86qsih1ap7j02vriwabqna974q68bapfm52qnvm77z"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf sp stringr tibble xml2]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.5"; sha256="120labhmisw1x1bq8c4bl6l14vayvb9xcm6jsj1awacypgrr2ar2"; depends=[automap gstat mapdata maps proj4 sp]; }; FertBoot = derive2 { name="FertBoot"; version="0.5.0"; sha256="168xfxpb43brfnp6c6b4chhpzb9z0aiqa6fawc8m09an5ggh05jp"; depends=[nls_multstart simpleboot]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.5"; sha256="05n8lvx3cs1ckliaj7ni2rbfcrdl7d0pzf9bkwlyd1779h684cxz"; depends=[data_table devEMF ggplot2 gridExtra plyr png sqldf stringr]; }; + FiRE = derive2 { name="FiRE"; version="1.0.1"; sha256="08xs4w7d3w4zrymq0sjpz34hmsd4lsd5989r660qdpg3ybpqx8lj"; depends=[BH Rcpp]; }; FiSh = derive2 { name="FiSh"; version="1.1"; sha256="1fcs2y3diszypv7sr4vl75wizcxv0na0pqflmlrizs2w7kyw51p6"; depends=[fda_usc KernSmooth]; }; + FielDHub = derive2 { name="FielDHub"; version="0.1.0"; sha256="19fz1ga998znllbrmfnmf84rq4kddg6cmf2c9s1nmi1mf1s75rqs"; depends=[attempt blocksdesign config dplyr DT ggplot2 glue golem htmltools magrittr numbers plotly shiny shinyalert shinycssloaders shinyjqui shinythemes turner viridis]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; FinAna = derive2 { name="FinAna"; version="0.1.2"; sha256="09svg5z52vv90ih85awgh6ns3pqi789qjm2wi1gb9hbg9v5g7pdv"; depends=[]; }; FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; }; @@ -1600,24 +1652,26 @@ in with self; { FinePop2 = derive2 { name="FinePop2"; version="0.4"; sha256="1rzsbxbxynn0pl6dlkmsjxiph403ffwlb2brsi8cm4r22jjhcx4i"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; FisPro = derive2 { name="FisPro"; version="1.1"; sha256="0qdig7958vavsxj64gp336b9ayhscrcxmnjxhrb4m4vyg3f8c3sn"; depends=[BH Rcpp Rdpack]; }; - FishResp = derive2 { name="FishResp"; version="1.0.3"; sha256="0cydxs9knbmsyxrhqi68aqa12x20k6wcs6jw7z58k2jisypwqclw"; depends=[chron lattice mclust respirometry rMR]; }; + Fiscore = derive2 { name="Fiscore"; version="0.1.3"; sha256="0mxiip7gwhm9ck5a7yn12shk8jwjmq34j99n3shzhh6h482kqs94"; depends=[bio3d dplyr ggplot2 knitr lattice mclust plotly rmarkdown stringr]; }; + FishPhyloMaker = derive2 { name="FishPhyloMaker"; version="0.2.0"; sha256="1q1kh999nx0hmgvnzxls95y7q501n0pqic0ylvrwq25ba2qwmcsg"; depends=[ape fishtree geiger knitr phytools progress rfishbase rmarkdown]; }; + FishResp = derive2 { name="FishResp"; version="1.1.0"; sha256="12b0akpx8xjarhjrn47x930vqh3kswm784xd1k14fx6bxjjy8ais"; depends=[chron lattice mclust respirometry rMR]; }; FisherEM = derive2 { name="FisherEM"; version="1.6"; sha256="18xn0hnj5diq7falrjl04abqyyrvyzaikb9l6wh7hfhflhsd382c"; depends=[elasticnet ellipse ggplot2 MASS plyr]; }; FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; FitARMA = derive2 { name="FitARMA"; version="1.6.1"; sha256="02di0pkz6hh92glpn3li6z9azkcqa64ja8zfpy0mkh1l97mw6jsv"; depends=[FitAR]; }; FitUltD = derive2 { name="FitUltD"; version="3.1.0"; sha256="17fj211riybq71k63wjfv2ndc2h46ay5svrac2v5i3b92cb9hkbv"; depends=[ADGofTest assertthat cowplot fitdistrplus ggplot2 MASS mclust purrr]; }; FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; }; - FixedPoint = derive2 { name="FixedPoint"; version="0.6.1"; sha256="0fxs95rhx17bxv1xx207f83rn4x35gahws4a0n85mfmlb5x2rf5d"; depends=[MASS]; }; + FixedPoint = derive2 { name="FixedPoint"; version="0.6.2"; sha256="1jgqc7m3cvyvxlpkvcqqyfmjl8harsb4kl7msk3qd8mn4qjvvyms"; depends=[MASS]; }; FlexDir = derive2 { name="FlexDir"; version="1.0"; sha256="1gb5alv9jsnw0135g63cy757pxhdw6cgwfm8dpcm8dj9zqg10dkm"; depends=[]; }; FlexGAM = derive2 { name="FlexGAM"; version="0.7.2"; sha256="04xbglg9vli18fd24k1qyvbl7svp70k67ig3jiss96fgkgbi6w7c"; depends=[MASS Matrix mgcv scam]; }; FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-5"; sha256="1404cn3bhcdr3mjhpr072zcyl0wnksarsg2sry5d1scsmrn4xq83"; depends=[nlme]; }; FlexReg = derive2 { name="FlexReg"; version="1.0"; sha256="0zwm9jd7idakmf344fh7bgwyl20cl5iszxh7rk1iw94yjcq3g06l"; depends=[bayesplot BH Formula ggplot2 loo Rcpp RcppEigen rstan rstantools StanHeaders]; }; - FlexScan = derive2 { name="FlexScan"; version="0.2.0"; sha256="1jd93h96qhqvk9xx3va78v76fzl6y0rbm85022zpvk3wz4z2g1xs"; depends=[smerc sp spdep]; }; + FlexScan = derive2 { name="FlexScan"; version="0.2.1"; sha256="1p9kzj58zzkkxjq4gnhln1av53an05m3qbyzh5i92vcgnn3z1s79"; depends=[smerc sp spdep]; }; FlickrAPI = derive2 { name="FlickrAPI"; version="0.1.0.0"; sha256="0bbk7ac4s3gbcjhfg3yz06pxjid3hpd0mqzxzlj5sghn95f479h9"; depends=[jsonlite magrittr RCurl stringr]; }; FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; }; FlowScreen = derive2 { name="FlowScreen"; version="1.2.6"; sha256="1s9xyrvfsgrl2zxm2an5qj3rs1qx7v7j8wc83jzl28pkwa5xr351"; depends=[changepoint evir zyp]; }; FluMoDL = derive2 { name="FluMoDL"; version="0.0.3"; sha256="0vp3w6hpph6svz8940w9yk9c5iv4n9mj94f9si1ks0xjbi948rqd"; depends=[dlnm mvmeta tsModel]; }; FlyingR = derive2 { name="FlyingR"; version="0.2.0"; sha256="0smishimssanzssndbwh9d276sq8vdldpzb3ww9c4nlwypxjmr8z"; depends=[kableExtra knitr Rcpp rmarkdown]; }; - FoReco = derive2 { name="FoReco"; version="0.1.1"; sha256="1vlys6wv2h6bdzx5c33glykbipk0dsdf431ww5vgdl6r7p0h9xqs"; depends=[cli corpcor Matrix osqp pracma]; }; + FoReco = derive2 { name="FoReco"; version="0.2.1"; sha256="19mrw1yah2nzajgzai1vxm38pp8mry3143wjm3g3447iajjh1hry"; depends=[cli corpcor mathjaxr Matrix osqp]; }; ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; }; ForImp = derive2 { name="ForImp"; version="1.0.3"; sha256="0ai4i6q233sdsi8xilpbkxjqdf4pxw93clkdkhcxal6q43rnf7vd"; depends=[homals mvtnorm sampling]; }; ForeCA = derive2 { name="ForeCA"; version="0.2.7"; sha256="1falhz9v0z76h60gz66rh9wvk3jsjv8fvbkhkx9jmzbrkla397cd"; depends=[astsa MASS reshape2]; }; @@ -1626,7 +1680,7 @@ in with self; { ForecastTB = derive2 { name="ForecastTB"; version="1.0.1"; sha256="1wqgw4i65ajwj8la8mgv2qqm4ydgk90i6chdkd8h33rlwh8yddc6"; depends=[circlize decomposedPSF forecast ggplot2 gridExtra imputeTestbench PSF RColorBrewer reshape2]; }; ForestDisc = derive2 { name="ForestDisc"; version="0.1.0"; sha256="1mzlrqjxsja51yyxckj4ym1vpfpq30vlhvs8clrg8jv7kz86hdwk"; depends=[moments nloptr randomForest]; }; ForestFit = derive2 { name="ForestFit"; version="0.7.1"; sha256="1dzk70w2w75wwjpm5195242s2z44wg4lfr217gmzss7va8ia9dy2"; depends=[ars pracma]; }; - ForestTools = derive2 { name="ForestTools"; version="0.2.4"; sha256="0aar9997r3pg4b1ypz7cy6qgfbhly8zbjspww899r0dy247q17jq"; depends=[APfun doParallel foreach imager plyr progress raster Rcpp rgeos sp]; }; + ForestTools = derive2 { name="ForestTools"; version="0.2.5"; sha256="0v6m6br54cj0a218ddgkhmqr6ldk29g03pddyqh9krihq37wnjsa"; depends=[APfun doParallel foreach imager plyr progress raster Rcpp rgeos sp]; }; Formula = derive2 { name="Formula"; version="1.2-4"; sha256="1bsw282i5m8rlirbhz7hqvf25zbxschk7yrp152whbzdnmry6w6b"; depends=[]; }; ForwardSearch = derive2 { name="ForwardSearch"; version="1.0"; sha256="0yd47832piqxzjxgl7bc8pn0c8f7vbgsm9z6894rzyi615kjl70b"; depends=[robustbase]; }; FossilSim = derive2 { name="FossilSim"; version="2.2.0"; sha256="0q3p2linl30h136gyygl2pg0gs47s6lmb39llbaq7cpq52saxaks"; depends=[ape TreeSim]; }; @@ -1641,12 +1695,12 @@ in with self; { FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; }; Fstability = derive2 { name="Fstability"; version="0.1.2"; sha256="0kscdmrs5namvhi112b47c811w0bg9s3xg48mfa566pxwxz1nv45"; depends=[]; }; FunCC = derive2 { name="FunCC"; version="1.0"; sha256="0n8fnrq3grsxxcz1841d3d643nyrwc7y15na1205zxq6rmdjx7wa"; depends=[biclust ggplot2 narray RColorBrewer reshape]; }; - FunChisq = derive2 { name="FunChisq"; version="2.5.1"; sha256="153l9mlynfl1j6ld7v4dl6lvs6rz20hchz009qngpg13szddafzb"; depends=[BH Rcpp Rdpack]; }; + FunChisq = derive2 { name="FunChisq"; version="2.5.2"; sha256="0ds8gx86bi882nmdlivvigr53kq1dcq4cqj03szg44j8p6q3vhkx"; depends=[BH dqrng Rcpp Rdpack]; }; FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FunWithNumbers = derive2 { name="FunWithNumbers"; version="1.0"; sha256="0kzmfy2dn41v7991crshxjcycp1s432ip0ivw8bq6x9v638skwkk"; depends=[gmp Rmpfr]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.10"; sha256="0iaay6qz9a2s77xjfpp7wm37y7xwnvmlw6s5k5riccmqzc6dcjs7"; depends=[mvbutils]; }; FuncNN = derive2 { name="FuncNN"; version="1.0"; sha256="0kcr7c54igzi0imp8w9a0mnrqaa2qcls9777scsjz5sbcxdy3if3"; depends=[caret doParallel fda fda_usc flux foreach ggplot2 ggpubr keras Matrix pbapply reshape2 tensorflow]; }; - FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.3.2"; sha256="0pplrbw4grphh92d941vqpqwqphc8d5iglgzzb0d0xknr5m20b8w"; depends=[dplyr ggplot2 ggrepel scales]; }; + FunnelPlotR = derive2 { name="FunnelPlotR"; version="0.4.0"; sha256="1ircrmjk18y8jabgzdfpbg66w39m0mcgqdhvfh7jfaxyxs194qkj"; depends=[dplyr ggplot2 ggrepel scales]; }; FusionLearn = derive2 { name="FusionLearn"; version="0.1.1"; sha256="0n8bj7k2r2vf0v2nsw31k75hzkqj5l4hyfnmvid102hx9cl8hv3y"; depends=[]; }; Fuzzy_p_value = derive2 { name="Fuzzy.p.value"; version="1.1"; sha256="13h6armh9g57zqxyjqk6mq81jlfqxqrg2sb5p9rrhslka5m01zis"; depends=[FuzzyNumbers]; }; FuzzyAHP = derive2 { name="FuzzyAHP"; version="0.9.5"; sha256="02sx32vlvnr0fzw8rf0f6hiikqn7xp1ibpqzxhxwv8yij2qkiyci"; depends=[MASS]; }; @@ -1655,7 +1709,8 @@ in with self; { FuzzyNumbers = derive2 { name="FuzzyNumbers"; version="0.4-6"; sha256="1zba28kmzpcza099k1ck7aqn7ms2fh3ijcn05xdimvssjbhsag81"; depends=[]; }; FuzzyNumbers_Ext_2 = derive2 { name="FuzzyNumbers.Ext.2"; version="3.2"; sha256="0gldq0bg1p1vmrn35prha44d7lyymz0jzshdyp2c5rx433mny7h5"; depends=[FuzzyNumbers]; }; FuzzyQ = derive2 { name="FuzzyQ"; version="0.1.0"; sha256="1camdw7rnzf02nqjlmkr7mqpc38dafq9nw8x7pzwi1lh5xwv5dia"; depends=[cluster]; }; - FuzzyR = derive2 { name="FuzzyR"; version="2.3.1"; sha256="0qwswa9m3z64cqvhqk8c194b1mr7rzjk59i94kb8lbxdg4y8gagb"; depends=[plyr shiny]; }; + FuzzyR = derive2 { name="FuzzyR"; version="2.3.2"; sha256="0d0zf8diw7m10zfx0r5zg5arhf4a90sva77h6rvfywixldwrnk7s"; depends=[plyr shiny]; }; + FuzzyResampling = derive2 { name="FuzzyResampling"; version="0.1.0"; sha256="0iziav76lflayi9ly9mgnr3fxx6r85f501w46vrhdvrbndpn43xl"; depends=[ttutils]; }; FuzzySTs = derive2 { name="FuzzySTs"; version="0.2"; sha256="0zs1pyn9apysspxa0glqc96h6npmvvhiqvqpcm0brslz0b6xnilp"; depends=[FuzzyNumbers polynom]; }; FuzzyStatProb = derive2 { name="FuzzyStatProb"; version="2.0.4"; sha256="1jpqb8xczi1d4g306vrwpi02f9h59aki1pgnckvfmiclr306prpb"; depends=[DEoptim FuzzyNumbers MultinomialCI]; }; FuzzyStatTra = derive2 { name="FuzzyStatTra"; version="1.0"; sha256="1ijrlnlmq9d5ahgrpzba6kzkaq1zq59zqdgcizybsf9alsswcm00"; depends=[]; }; @@ -1667,13 +1722,14 @@ in with self; { GACFF = derive2 { name="GACFF"; version="1.0"; sha256="0lhjzb6cj8838dh4423929z7bwpa6cv3dn84rccwi3382vsq9g2c"; depends=[]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; - GADMTools = derive2 { name="GADMTools"; version="3.8-2"; sha256="0894268yfbspwhp06wqhnwr09y26z75qbw2c85dk0k506zpbjc8y"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr]; }; + GADMTools = derive2 { name="GADMTools"; version="3.9-1"; sha256="0l62gsd3sdyvhsw7bqvgn3fv15xwm13y9nsm8r9fgcqbfpw45g32"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; GALLO = derive2 { name="GALLO"; version="1.2"; sha256="068cb8v3hb9asn4x2vfgzqvd6ygbivj8206h6is35wvz14pphml5"; depends=[circlize data_table doParallel dplyr DT foreach ggplot2 lattice RColorBrewer rtracklayer stringr unbalhaar webshot]; }; GAMens = derive2 { name="GAMens"; version="1.2.1"; sha256="1z10wxcg277fra2lch464l0kb02lspw9qr1i2wmq11wcz0k9qnl8"; depends=[caTools gam mlbench]; }; GANPA = derive2 { name="GANPA"; version="1.1"; sha256="19nq1nlpb1lr2b9i5ckyl5m6daalrqkpx386r6i25qfvaywxl2bf"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GARCHIto = derive2 { name="GARCHIto"; version="0.1.0"; sha256="1rh9da9gb1krxasx1apldns5k3wl2xjjqc8bidsd5c0h5jlqdvr6"; depends=[Rsolnp]; }; + GARCHSK = derive2 { name="GARCHSK"; version="0.1.0"; sha256="0fwzv8js3d9klbzs58m946k7q50yxpf0cxia3r2z2gy85xphrsm0"; depends=[Rsolnp]; }; GARCOM = derive2 { name="GARCOM"; version="1.2.0"; sha256="1fgr03gw86fjrj6hx32qvl6jsc6ax9i1ss4bbfmi8iz2f1nq43wi"; depends=[data_table vcfR]; }; GAS = derive2 { name="GAS"; version="0.3.3"; sha256="0w5rgx3f965jxl2r6rhsj5ad4bbbwir8hbki3q0cs2z9hc4g6vh9"; depends=[cubature MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; @@ -1681,7 +1737,6 @@ in with self; { GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; GB2group = derive2 { name="GB2group"; version="0.3.0"; sha256="1dbyc7izyggfrsq2gj7rwff5qjyy6bx6ip09xvbj73xqczv8fkcd"; depends=[GB2 ineq minpack_lm numDeriv]; }; GBJ = derive2 { name="GBJ"; version="0.5.3"; sha256="12lsddkcxz37hn2fvjq158wb1bc6b3hx6wj8q8nj21zpmyl3n2qh"; depends=[BH mvtnorm Rcpp SKAT]; }; - GBcurves = derive2 { name="GBcurves"; version="0.1.2"; sha256="0s633dsd5wl3wzf893j3cqrlici1g4g355z66vppsb3xc3s8aaxc"; depends=[curl functional httr magrittr readxl rvest xml2 xts]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; GCD = derive2 { name="GCD"; version="4.0.7"; sha256="1259z76hajapzzq75fas2sq19r0wapn1ybghdaqdc6dksifdz6fv"; depends=[raster]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; @@ -1690,17 +1745,17 @@ in with self; { GCalignR = derive2 { name="GCalignR"; version="1.0.3"; sha256="0fq5jglgbw2cqm4pa7x4lczqjr1w65ddnhzlr2i97skzk0gcdlr5"; depends=[ggplot2 pbapply readr reshape2 stringr tibble]; }; GD = derive2 { name="GD"; version="1.10"; sha256="1sy77yxnwh2n48zahh498v30nl3hivrsmyp0jf3gyyzhxm8z1n5l"; depends=[badger]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; - GDAtools = derive2 { name="GDAtools"; version="1.6"; sha256="0m2h37a4szi6cq9ivljs7v22n7hilbwp7ppvqrz6jfv8baz6rfw3"; depends=[FactoMineR ggplot2 ggrepel MASS nleqslv nnet RColorBrewer rlang wdm]; }; + GDAtools = derive2 { name="GDAtools"; version="1.7"; sha256="1fsx2kxilvfvm9nccn1a9ly6kavz9l8np6az2ax9dd00rbvqjcjl"; depends=[FactoMineR GGally ggplot2 ggrepel MASS nleqslv nnet RColorBrewer rlang wdm]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; - GDINA = derive2 { name="GDINA"; version="2.8.0"; sha256="0chxnhp37xfd78gafkgwqrmc0jf3pvpdyrkc438kl0l53fb7dld7"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; - GE = derive2 { name="GE"; version="0.1.8"; sha256="0v35f3aqw67pr1igjzilnz9zbi3w7p12v3g0lbbnrn03j5xaqngl"; depends=[CGE data_tree DiagrammeR]; }; + GDINA = derive2 { name="GDINA"; version="2.8.7"; sha256="08cdjp4mqn81j3wa770v7n8zkslys9jqqb3d3c09dkfmgdk6hga4"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; + GE = derive2 { name="GE"; version="0.2.1"; sha256="1nrgn0vdil6h9il60mn1c566dd2yd0qsch813sh7733syc3g9vgb"; depends=[CGE data_tree DiagrammeR]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.3"; sha256="1xprkpjp1pkq4ci1n32d3yy80hx3r4xf2j7f6hv7dvsn4cvdp417"; depends=[gee]; }; - GEInter = derive2 { name="GEInter"; version="0.3.0"; sha256="09pbg7izifw6d44y4mhbqh9dmfbzqd3kx4b3hanwsr7rzcc1ijy3"; depends=[ggplot2 Hmisc MASS pcaPP quantreg reshape2 survAUC survival]; }; + GEInter = derive2 { name="GEInter"; version="0.3.1"; sha256="10f2s2w8kh35aidg4ixb71v1j9817k5y6dmddm2kvxhzk6b6f7gn"; depends=[ggplot2 Hmisc MASS pcaPP quantreg reshape2 survAUC survival]; }; GENEAclassify = derive2 { name="GENEAclassify"; version="1.5.2"; sha256="1rddzf1qdi2xslb7qbrb60940ccq6a17wzsbmvwl2wliv183xhwm"; depends=[changepoint GENEAread MASS rpart signal]; }; GENEAread = derive2 { name="GENEAread"; version="2.0.9"; sha256="00whn2xqlcdcgmrifng04j2csxynfb1dmj9wkx981ylz13jsnwm9"; depends=[bitops mmap]; }; GENEAsphere = derive2 { name="GENEAsphere"; version="1.5.1"; sha256="1kgj7i9v2yn0b8lvvsf0nc6lg3i2syrcygwa51pcrzp57vv7hxn5"; depends=[GENEAread ggplot2 MASS misc3d rgl]; }; - GENLIB = derive2 { name="GENLIB"; version="1.0.9"; sha256="1ch3wz3y6p6z0rs9b3877iihvp0ycha062ajzf2fhxgjzgf0v5d1"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; + GENLIB = derive2 { name="GENLIB"; version="1.1.5"; sha256="1s0qrdfz45wygbbpaajbgj36178wg3xhxnayc588yhhc4w0n47fa"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; GENMETA = derive2 { name="GENMETA"; version="0.1"; sha256="1mxwqnbg5bvx1qg62xcd62dl81k11l64yckhl3v854asnaczq3pp"; depends=[magic MASS Matrix]; }; GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; GESE = derive2 { name="GESE"; version="2.0.1"; sha256="0h3s2sbnv5wilr2mj6bnl2892p16pxrs341gg6jql1a540p669sk"; depends=[kinship2]; }; @@ -1711,37 +1766,38 @@ in with self; { GEint = derive2 { name="GEint"; version="0.1.5"; sha256="179gpq4qjhgx1fhyjdb80rf2ip80zhhfyn8xjgwq1a425163q1y7"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; }; - GFD = derive2 { name="GFD"; version="0.2.9"; sha256="1q60n2l00vm5v0wl9zk780lhvh294fqmvcfgch37zm3lyr9zllvh"; depends=[magic MASS Matrix plotrix plyr]; }; - GFDsurv = derive2 { name="GFDsurv"; version="0.0.2"; sha256="0fp701whhfy3f994wcqy48wdly85r8zvn76anr3yxqnywi1kkwxi"; depends=[gridExtra magic MASS plyr shiny shinyjs shinythemes shinyWidgets survival survminer tippy]; }; + GFD = derive2 { name="GFD"; version="0.3.2"; sha256="15chm0r9sgdvjg0f4cayqj92blxkj5949mwhpx72bqcwzh3h8f4x"; depends=[magic MASS Matrix plotrix plyr shiny shinyjs shinythemes shinyWidgets tippy]; }; + GFDsurv = derive2 { name="GFDsurv"; version="0.1.0"; sha256="1kyazvyz9rgjklh63aq70f3jsv1fpy3ws5wbg4vdah52p8fk35j9"; depends=[gridExtra magic MASS plyr shiny shinyjs shinythemes survival survminer tippy]; }; GFE = derive2 { name="GFE"; version="0.1.0"; sha256="0ywrg23z13kp8ggw4wbm4jvr2rvb6kra7ma0mgfj8xzkrxs6vi6m"; depends=[data_table dplyr TeachingSampling]; }; GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.4"; sha256="0cw8ih9dj86cvks0qcpffzjx8lv6qiwvk3f1wri8zashj8lk9am6"; depends=[cmprsk compound_Cox joint_Cox]; }; GFisher = derive2 { name="GFisher"; version="0.1.0"; sha256="1k5ik1q78gy2x0qr15shdr9rry93dh68876l6ifh21ppqw3y1x9j"; depends=[Matrix mvtnorm]; }; GGClassification = derive2 { name="GGClassification"; version="0.1"; sha256="03wis5ng2mnfhp33xrag8xbmvjagzr1909a6x94wv7s2spji00rp"; depends=[Rcpp RcppEigen]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="2.3-0"; sha256="1m4l2l6x3xjs0ar9yn1raws3d2bid5sxgp71z75lkppcdzbqpwh2"; depends=[bitops data_table doParallel foreach GENEAread matlab Rcpp signal tuneR unisensR zoo]; }; + GGIR = derive2 { name="GGIR"; version="2.4-0"; sha256="15aljzy725x00grhphr2x5j8w5djf1z7wc3683vdji78q3znwj1b"; depends=[bitops data_table doParallel foreach GENEAread ineq matlab Rcpp signal tuneR unisensR zoo]; }; GGMncv = derive2 { name="GGMncv"; version="2.0.0"; sha256="1h1h2qx784f41ihmylj8zxhcxcd67r10qpz5938iynnr04mjm6l0"; depends=[ggplot2 glassoFast MASS mathjaxr numDeriv Rcpp RcppArmadillo Rdpack reshape]; }; GGMnonreg = derive2 { name="GGMnonreg"; version="1.0.0"; sha256="1bhqk172ddc7xq1hqj1i6q8np6jvmf2xypvd8kp3w1bcsafsbms8"; depends=[bestglm corpcor doParallel foreach GGally GGMncv ggplot2 MASS Matrix network poibin psych Rdpack sna]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; GGMselect = derive2 { name="GGMselect"; version="0.1-12.4"; sha256="0p9djnkclnk64bcrd66agi2gw2j3bqvqhamfm0h59b810kh50kbn"; depends=[gtools lars mvtnorm]; }; GGRidge = derive2 { name="GGRidge"; version="0.1.0"; sha256="1q5lgnzbhczfylkj2p07r2a088i0d2xgmggilwlg6b0gc9qg7xf8"; depends=[CVglasso graph gRbase MASS]; }; GGUM = derive2 { name="GGUM"; version="0.4-2"; sha256="0v6h09aj47qwylqybqvpr5rb0saam4fpbplzb4f3a1qfqd5b1k0g"; depends=[abind psych Rdpack viridis xlsx]; }; - GGally = derive2 { name="GGally"; version="2.1.1"; sha256="0lly659kd43cnz1bmmzqj6dbf4v0nm8dhj8xq2wlv9qbnfhq5r9p"; depends=[dplyr forcats ggplot2 gtable lifecycle plyr progress RColorBrewer reshape rlang scales tidyr]; }; + GGally = derive2 { name="GGally"; version="2.1.2"; sha256="1r98zgh2grn8330cf26r1c20gl131zm778szvn5wj6q6pwv2yd9h"; depends=[dplyr forcats ggplot2 gtable lifecycle plyr progress RColorBrewer reshape rlang scales tidyr]; }; GHS = derive2 { name="GHS"; version="0.1"; sha256="1khjfy62a67r59s2rax9mmnqy5xnnwhbydzhqwwmyspl48mxycdj"; depends=[MASS]; }; GHap = derive2 { name="GHap"; version="2.0.0"; sha256="0br9civfdlksn5xmyrvz2y0knikcd2i175kddxjdqmiyyayckc8w"; depends=[class data_table e1071 lme4 Matrix]; }; GIFTr = derive2 { name="GIFTr"; version="0.1.0"; sha256="101vr2qasky8hnxp5i3lhlnymwzciypqwvhpl6mrr0r0czgpcz2f"; depends=[glue stringr]; }; GIGrvg = derive2 { name="GIGrvg"; version="0.5"; sha256="0mx4n4kf34343yiww80fw5yy0x624xsj71n8fr4dm0a2338pxq8v"; depends=[]; }; GISTools = derive2 { name="GISTools"; version="0.7-4"; sha256="06alb5d2k4qj344i9cpgm3lz9m68rkmjqfx5k2hzn7z458xjrlxs"; depends=[maptools MASS RColorBrewer rgeos sp]; }; GInSARCorW = derive2 { name="GInSARCorW"; version="1.15.6"; sha256="0rpq8ng9skxg6qzhainsc9jkznql6glq65a1bdbrkc6pwx3pc7lc"; depends=[circular raster rgdal rgeos sp]; }; - GJRM = derive2 { name="GJRM"; version="0.2-4"; sha256="0bzwbdil0jyabwpmj00clnahszip13w53ydgzm1q7kyk2nfs2z88"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; + GIplot = derive2 { name="GIplot"; version="0.1.0"; sha256="1asyd4f76xg84jnwa8kxcw5z6ch3kpy0p7yigmyga94908gylpxj"; depends=[]; }; + GJRM = derive2 { name="GJRM"; version="0.2-5"; sha256="014ink3bg68g8pdymz6iwyf0k0vmigh5n8izcgxjmdqjp90iwwck"; depends=[copula distrEx evd gamlss_dist ggplot2 ismev magic matrixcalc matrixStats mgcv mnormt numDeriv psych Rmpfr scam survey survival trust trustOptim VGAM VineCopula]; }; GK2011 = derive2 { name="GK2011"; version="0.1.3"; sha256="13vafhbgcsj485f12qv962y07v3hil3pla51vkl2b030amzy86jv"; depends=[]; }; GLDEX = derive2 { name="GLDEX"; version="2.0.0.7"; sha256="1w5ahwbnz9xsn3rdxzcxxvc6m5cgq46nln3i5v8vp4imrs8aafb3"; depends=[cluster]; }; GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; GLIDE = derive2 { name="GLIDE"; version="1.0.2"; sha256="1z5h8br6aig24g5gsh8h6npm269id3h5gjjyf5avs4v08b51rpcv"; depends=[doParallel foreach MASS]; }; GLMMRR = derive2 { name="GLMMRR"; version="0.5.0"; sha256="072zwi1rs6d84iszn09v5g19bkpla19nfqk4pq40ad8368zkbhcm"; depends=[lattice lme4 RColorBrewer]; }; - GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.8-0"; sha256="1jp8mp4xgx23nh54m6xi67qmmggf8y4fpz010r106kvwlzczshsr"; depends=[MASS matrixStats nlme]; }; + GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.8-2"; sha256="12lz7rkd4jfwp3gpwp2awzdkdw1qpbdi2l1b48s1drzjymjk0m0g"; depends=[MASS matrixStats nlme]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; - GLMcat = derive2 { name="GLMcat"; version="0.2.1"; sha256="0flmi4gpvcfr7w16h2xikclkcyca085br8awj6w2grkb7mpvpih1"; depends=[BH Rcpp RcppEigen]; }; + GLMcat = derive2 { name="GLMcat"; version="0.2.4"; sha256="0m9vl7x9r68w4dgz29sg3rpmggqpgzfsrhsn8f2q6i184g73cvng"; depends=[BH Rcpp RcppEigen stringr]; }; GLMpack = derive2 { name="GLMpack"; version="0.1.0"; sha256="15bpw42y999ljdw8ka2ysrrm0y73xz37wwi3j67i01wafipq82xy"; depends=[AER censReg effects foreign lme4 lmtest MASS Matrix nnet pBrackets plm pscl sandwich]; }; GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; GLSME = derive2 { name="GLSME"; version="1.0.5"; sha256="18gixzg8b8yql91dhv8xsrcrxdix0kr0qgmiva0hwmyzpsn6rqam"; depends=[corpcor mvtnorm]; }; @@ -1749,25 +1805,25 @@ in with self; { GMCM = derive2 { name="GMCM"; version="1.4"; sha256="13ds8da7lqkvm1mz75440hmn9smi9pznb8bknmckg8vd3fc70f6x"; depends=[ellipse Rcpp RcppArmadillo]; }; GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; GMDH2 = derive2 { name="GMDH2"; version="1.6"; sha256="0zc1xvg3f3cdspr1d2lx60n93hhnqrp7653gf27krknf9dmsf5zg"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; - GMDHreg = derive2 { name="GMDHreg"; version="0.2.1"; sha256="1rav4xhli8gy27sa5zh3lvpgz6zpff37783z1k23n0xf4n0h61nh"; depends=[]; }; - GMKMcharlie = derive2 { name="GMKMcharlie"; version="1.1.1"; sha256="1adra4qjq0xriyg08zyh9f99x1sry59kmvrissb0kssaqs4r7gk9"; depends=[Rcpp RcppArmadillo RcppParallel]; }; - GMMAT = derive2 { name="GMMAT"; version="1.3.1"; sha256="0p1wl9wppddggn0hrxmhy3jbw42n9h52jjwijjha5zmhjjlr665b"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; + GMDHreg = derive2 { name="GMDHreg"; version="0.2.2"; sha256="1q583l0nsd4x1zm4fhh1q3kw3rh1v1vlaczkc59kzfs1h0l83hp2"; depends=[]; }; + GMKMcharlie = derive2 { name="GMKMcharlie"; version="1.1.5"; sha256="1c7zb83p4r46h42xsjaj3c8zrnhrrhvggz4nqmasp52fh6gdarz6"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + GMMAT = derive2 { name="GMMAT"; version="1.3.2"; sha256="04bqvcyg4zl2knnpp150a2jzx1s88ymnb1kcfa6l0jlmn98sm6z5"; depends=[CompQuadForm foreach Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; GMMBoost = derive2 { name="GMMBoost"; version="1.1.3"; sha256="0p9jnwjc8g83qsxkjz9lhaip1hkpdg6n4fdpz34b96vb7qhzrrqc"; depends=[magic minqa]; }; GMPro = derive2 { name="GMPro"; version="0.1.0"; sha256="0xhja221wz89cm76qbq01nqz73jx7d2zx9i2ky5vd31zkspmlqkm"; depends=[combinat igraph transport]; }; - GMSE = derive2 { name="GMSE"; version="0.6.0.4"; sha256="1q3laiyrkps9v51hlhyvmam9a5a1djmxkgjl562p46fszk1hm17n"; depends=[shiny shinydashboard shinyjs]; }; + GMSE = derive2 { name="GMSE"; version="0.7.0.0"; sha256="0a8c0zykbl1g351jwrhi9fdns9p22690f1q4har53w3bmlqz5934"; depends=[shiny shinycssloaders shinydashboard shinyjs]; }; GMSimpute = derive2 { name="GMSimpute"; version="0.0.1.0"; sha256="1hmn5ss81df9j9ibgibs95j98irqzif94vq0c861mq4a65y59fcp"; depends=[ggplot2 glmnet reshape2]; }; GMZTests = derive2 { name="GMZTests"; version="0.1.4"; sha256="0a5rc9xc0rm97gf3m87x00hj11i6n3ygss4h57iia2hiqr76faak"; depends=[DCCA fgpt fitdistrplus nonlinearTseries PerformanceAnalytics tseries]; }; GNAR = derive2 { name="GNAR"; version="1.1.1"; sha256="1ryiv671nhhhif8xqj8lx6jfh503ayqvldnmzkwfma2ww1518y08"; depends=[igraph wordcloud]; }; GNE = derive2 { name="GNE"; version="0.99-3"; sha256="11pk9w4xj27dyfn05bna99xqdb89wp0ljl798d5dyk5fcnhh7217"; depends=[alabama BB nleqslv SQUAREM]; }; - GNRS = derive2 { name="GNRS"; version="0.2.0"; sha256="14iwvcknx86v1dz19blg0z3bfg4cshjha4n83js3lr6nfvy2s5h6"; depends=[jsonlite RCurl]; }; GNSSseg = derive2 { name="GNSSseg"; version="6.0"; sha256="1zkj98xh63wfyyygg2ahq3m54xlvi3x9sy0rhcn2dlfvbxaxfl4k"; depends=[capushe robustbase]; }; GOFShiny = derive2 { name="GOFShiny"; version="0.1.0"; sha256="04m08d9w8qqbql86c18qpnwym7agry8wspfwrnbbyp52h2pn2gxb"; depends=[rhandsontable rmarkdown shiny]; }; GOGANPA = derive2 { name="GOGANPA"; version="1.0"; sha256="1xbir21zvr5hv2y6nndzpsrpmnr7glrc7y6xgcyb856wx46ajan9"; depends=[GANPA WGCNA]; }; GORCure = derive2 { name="GORCure"; version="2.0"; sha256="1hazin0q74hf16azxa5h08kfj7g1079q77n2fn4fahpfxb8hmvwm"; depends=[ICsurv MASS pracma survival]; }; GOplot = derive2 { name="GOplot"; version="1.0.2"; sha256="1y8dv0kbzpr9za91njw0x233vx5d13vqml9hmpddcyi9s6va5nix"; depends=[ggdendro ggplot2 gridExtra RColorBrewer]; }; - GOxploreR = derive2 { name="GOxploreR"; version="1.1.0"; sha256="1a3333d94xrj8iavn2yawgb8x296ilji3drcwwvrjs7v7rib0k5f"; depends=[annotate biomaRt dplyr ggnetwork ggplot2 GO_db gontr igraph network]; }; + GOxploreR = derive2 { name="GOxploreR"; version="1.2.2"; sha256="0c03v1w5fbsd9rbbh1qmy76hwqz9n31ckzs07h5h0b79nx4z42yc"; depends=[annotate biomaRt dplyr ggplot2 ggraph GO_db gontr igraph network]; }; GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; }; - GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-4"; sha256="1ff49549cxrylicqgmf1b4gdqqhj8lk5fw0rzyni8ip970bfbkw9"; depends=[caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos]; }; + GPBayes = derive2 { name="GPBayes"; version="0.1.0-2"; sha256="1blxlfl31cwmyxfamz75ivfv2rym7q5wi4zgxrlwv27w08v8zy60"; depends=[Rcpp RcppEigen RcppProgress]; }; + GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-5"; sha256="0v4n8m3pcqxjyvli2wag3frzbqxpk9bjl8zkyz6sq2cwypv5wvyv"; depends=[caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos]; }; GPFDA = derive2 { name="GPFDA"; version="3.1.1"; sha256="1yivqyk8wlrpfxpnqdjkyzbbykfpmk5qg7cy6kxv469fhadccybc"; depends=[fda fda_usc fields interp mgcv Rcpp RcppArmadillo]; }; GPIC = derive2 { name="GPIC"; version="0.1.0"; sha256="1v44hkzf3wh09j5pcfmsc8h5jzmqa501bwkmdwwjb7pz64976r23"; depends=[]; }; GPL2025 = derive2 { name="GPL2025"; version="1.0.1"; sha256="0af42g3v91fbcmla2yq98v8rd4ifaznb1xvw7ny41r3843d8appc"; depends=[dplyr]; }; @@ -1777,7 +1833,7 @@ in with self; { GPRMortality = derive2 { name="GPRMortality"; version="0.1.0"; sha256="0k5pfyl7r5vsac927aqx19lz93vyk5l3ydqkazn2hwwaw1lh2wav"; depends=[rstan]; }; GPSCDF = derive2 { name="GPSCDF"; version="0.1.1"; sha256="1l50a6p81lykiqlqiwb6kix5s6wzwdi8vddqhl418dlwlsh83ybf"; depends=[dplyr MASS nbpMatching nnet survival]; }; GPSeqClus = derive2 { name="GPSeqClus"; version="1.0.0"; sha256="1zxihac4hd2b1vvrb36v2c6lhn8pfs8q4zgzi2flyb0dnb5di09r"; depends=[geosphere leaflet leaflet_extras plotKML plyr purrr rgdal sp spacetime suncalc]; }; - GPareto = derive2 { name="GPareto"; version="1.1.4.1"; sha256="0kmy7v3sm1h91havzla0fzmzihncbk01i7pbzsdq6cwhz7225mqj"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; }; + GPareto = derive2 { name="GPareto"; version="1.1.6"; sha256="0iss4827b96dcvhlyl6ajgvns5n5m854myx1qsb53vhq48ck93z2"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; }; GPfit = derive2 { name="GPfit"; version="1.0-8"; sha256="05mpiyi2vxv0wqp422n1mnxa8msc4daq40cwpnpngbcwqhlgqkby"; depends=[lattice lhs]; }; GPoM = derive2 { name="GPoM"; version="1.3"; sha256="1c870dfbpswx78n4s1v6zy0l1qknrs9335af0z01v1miyrmi95gd"; depends=[deSolve float rgl]; }; GPoM_FDLyapu = derive2 { name="GPoM.FDLyapu"; version="1.0"; sha256="1hpgiwh7b50gazp1msjsh2840b91wfrxhl2l45lxg6jr1m34q8pj"; depends=[deSolve GPoM]; }; @@ -1789,6 +1845,7 @@ in with self; { GRAPE = derive2 { name="GRAPE"; version="0.1.1"; sha256="1jzvf45ch8x8f2x9kmvv02xz9bix5vplh8143vc4m1yyq42x09c6"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GREMLINS = derive2 { name="GREMLINS"; version="0.2.0"; sha256="0wdqikz6k5d2cxcb347lhy7rj54blgf1m4sjv64zd4nx6c4r0ai8"; depends=[aricode blockmodels igraph mclust pbmcapply R6]; }; + GRNNs = derive2 { name="GRNNs"; version="0.1.0"; sha256="1c36km6g4fcsvpirlh88fl3zq9pdpdyfilahfx949salj0gnqsn6"; depends=[cvTools rdist scales vegan]; }; GROAN = derive2 { name="GROAN"; version="1.2.1"; sha256="07419rpd6492gwzn3lgxl37hdfama7wpzni1gj7dy8bvhn8l1m2a"; depends=[plyr rrBLUP]; }; GRPtests = derive2 { name="GRPtests"; version="0.1.2"; sha256="12w0vskf1n31zspk3vjgdlhrjwpsysvwwr0l0vm57j6faqc31i3s"; depends=[glmnet MASS randomForest ranger RPtests]; }; GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; }; @@ -1803,7 +1860,7 @@ in with self; { GSED = derive2 { name="GSED"; version="2.5"; sha256="0hz7rn0j62gy7bv67dxqpfdq86zv3yqhl9pwafcism94636h8vrj"; depends=[memoise R_utils rootSolve survival]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="3.1.0"; sha256="0ry91nwwbarzgq2xgvlvy91ihq463bvdq7mxms6am7agi8lkvf9p"; depends=[countrycode curl data_table httr R_utils]; }; + GSODR = derive2 { name="GSODR"; version="3.1.2"; sha256="01vcgqrjvi01bpi0k9razar3maf90wd56qil8m2k15j3bw48jnrc"; depends=[countrycode curl data_table httr R_utils]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSelection = derive2 { name="GSelection"; version="0.1.0"; sha256="052vh1haxlzbh3c5i24nrwphapik1y8ribmh6q4axd447ggc0ff9"; depends=[gdata penalized SAM]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; @@ -1811,7 +1868,7 @@ in with self; { GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; GUTS = derive2 { name="GUTS"; version="1.1.1"; sha256="05njlykhxs62k5cjrfwgbqyckbvf2jxjshg3avf6vhwwf58qyjq9"; depends=[Rcpp]; }; - GUniFrac = derive2 { name="GUniFrac"; version="1.2"; sha256="05nmdxrkcxg9674kb2lm640yl0d5hd0fzrnl61nwl2k8dfs8n8fx"; depends=[ape Matrix matrixStats vegan]; }; + GUniFrac = derive2 { name="GUniFrac"; version="1.3"; sha256="1bl7g80fcb71f85wp507n8w5lfhnh8w34jrmkdgs93y1igqk0aa3"; depends=[ape dirmult MASS Matrix matrixStats Rcpp rmutil statmod vegan]; }; GVARX = derive2 { name="GVARX"; version="1.3"; sha256="00iqwkshp1i9338x9khh8hyszad6150qb11jlvky5fm488wcw1y3"; depends=[lmtest lubridate sandwich strucchange tsDyn urca vars xts]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; GWASbyCluster = derive2 { name="GWASbyCluster"; version="0.1.7"; sha256="0ivlkxbh8m23vbnjfmhk0vfczd5b8lzy9w4gm1m6jpvdm40kn70x"; depends=[Biobase limma rootSolve snpStats]; }; @@ -1821,23 +1878,26 @@ in with self; { GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWI = derive2 { name="GWI"; version="1.0.2"; sha256="0gwbidvdzk7b1w880baa338h7cikvlzvqmbmdxca4r83jzzwxlj1"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.2.2"; sha256="1nm4w5m4ca6npmpvh9nb0cnrbzlyv95nvvhgs3pqcrw4igagm4hj"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; - GWRM = derive2 { name="GWRM"; version="2.1.0.3"; sha256="16ahlf1pbcpgha50a7ml2c336by50r287kihwshiazshifi5p3n3"; depends=[doParallel foreach]; }; - GWSDAT = derive2 { name="GWSDAT"; version="3.0.6"; sha256="18zih271mfp4b0xcz3fnsqw5jnzzm8x87cinp9pch6zrc5alv6ka"; depends=[deldir digest geometry Kendall lattice lubridate MASS Matrix officer raster readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; - GWmodel = derive2 { name="GWmodel"; version="2.2-5"; sha256="1winrlhx171xa3i18brd2mmrrd6q2nr296wxzwmc4y236vfzgy8i"; depends=[FNN maptools Rcpp RcppArmadillo robustbase sp spacetime spatialreg spdep]; }; + GWRM = derive2 { name="GWRM"; version="2.1.0.4"; sha256="13g91bx7b0cf1rnyc6azkvjilvc3kjynb8nclmbh8n3ccm6b0v2r"; depends=[doParallel foreach]; }; + GWSDAT = derive2 { name="GWSDAT"; version="3.1.0"; sha256="1ka461xilsdqc4frh46bicxfnm543k95chnlxghq6j9rjgkx4k0q"; depends=[deldir digest geometry Kendall lattice lubridate MASS Matrix officer raster readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; + GWmodel = derive2 { name="GWmodel"; version="2.2-7"; sha256="1qyzw22476fayiv70lk9kh0gz2zpy41kd2rhspj39qrnwi5v2rjs"; depends=[FNN maptools Rcpp RcppArmadillo robustbase sp spacetime spatialreg spdep]; }; GWnnegPCA = derive2 { name="GWnnegPCA"; version="0.0.4"; sha256="1yinzlp22z9z5fk9f1nm14i408yfm5kfgkn3pqnh4bkghs569ivg"; depends=[geodist nsprcomp pracma sf sp spData]; }; GWpcor = derive2 { name="GWpcor"; version="0.1.6"; sha256="1plh7m1gj2gh3lkprj1gfqag1dggkhnvz73pr0gp6w3qqhdk0qdh"; depends=[corpcor doParallel dplyr foreach geodist pracma sf sp]; }; GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; }; GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; }; + GaSP = derive2 { name="GaSP"; version="1.0.0"; sha256="0jm9fqlfxkl5pfr1ijbj8qci5xb974wk660xvh488xfwdwj02fnc"; depends=[]; }; GameTheory = derive2 { name="GameTheory"; version="2.7"; sha256="0vb7sjia5s58gw9zpkzddps8knxvbrz7fbi3m6digl8bf5vwhxxw"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; GameTheoryAllocation = derive2 { name="GameTheoryAllocation"; version="1.0"; sha256="0733vmyr0d9scjd5ixpnggr548snd7nj70knf5hbzc59nmbc5y11"; depends=[e1071 lpSolveAPI]; }; Gammareg = derive2 { name="Gammareg"; version="3.0"; sha256="1wh5k3nazycki0h094m4d0nnign8yksgnrrnrm3yka1s7mqzv781"; depends=[]; }; + GapAnalysis = derive2 { name="GapAnalysis"; version="1.0.2"; sha256="0ky1njrymh102dy7sna2cm5f5gyx4s7k77bnsdal1yndgw7ppqvx"; depends=[data_table fasterize geosphere raster rmarkdown sf sp tmap]; }; GauPro = derive2 { name="GauPro"; version="0.2.4"; sha256="1fll93r25293xdwv28g9my627f736kawr0ji1vxfc3q275zfy7lg"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; + GaussSuppression = derive2 { name="GaussSuppression"; version="0.1.0"; sha256="13k6khwvqgxn2i291gi6bwbdjcjl77scz9f8rsmk07cdn6nfakdn"; depends=[Matrix RegSDC SSBtools]; }; GaussianHMM1d = derive2 { name="GaussianHMM1d"; version="1.0.1"; sha256="1j1cwh0p7czy2l4qf6nymqcp8kkfaki0j2rj8p99nqn2vgc3vcax"; depends=[doParallel foreach]; }; GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; }; GeNetIt = derive2 { name="GeNetIt"; version="0.1-4"; sha256="1z9h3prlf5r7ks0ys4wy0i5i3giaplqmngsqwxllsy70jjb9s90h"; depends=[exactextractr nlme raster rgeos sf sp spdep]; }; GenAlgo = derive2 { name="GenAlgo"; version="2.2.0"; sha256="1pihqxif2v62hwf5761fshyhigcjmlgbvp2j7immxlsysjfw5xgq"; depends=[ClassDiscovery MASS oompaBase]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.1"; sha256="1w6k02bkawk7la7yjj8xby8w2a303gfk18xz08c7gka9a3m1lxqx"; depends=[]; }; - GenEst = derive2 { name="GenEst"; version="1.4.5.1"; sha256="17rcg4dzhi3mg9b34a7bdbjrb0xnms735nb4ngcqa6pzdkafd33f"; depends=[corpus DT gsl gtools hellno htmltools htmlwidgets lubridate MASS matrixStats mvtnorm Rcpp shiny shinyjs survival]; }; + GenEst = derive2 { name="GenEst"; version="1.4.6"; sha256="0qvxbm8vb39p7s6ajhr9fhkxi9qjw066ghv4vx8wn72vmgs9d4ic"; depends=[corpus DT gsl gtools hellno htmltools htmlwidgets lubridate MASS matrixStats mvtnorm Rcpp shiny shinyjs survival]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenHMM1d = derive2 { name="GenHMM1d"; version="0.1.0"; sha256="0liqfjx17xs8si15yrb4032ac33ibxn2xm010b244gfhl1wr2ar5"; depends=[actuar doParallel EnvStats extraDistr foreach ggplot2 matrixcalc reshape2 rmutil ssdtools VaRES VGAM]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; @@ -1862,17 +1922,19 @@ in with self; { GenomicTools_fileHandler = derive2 { name="GenomicTools.fileHandler"; version="0.1.5.9"; sha256="09l87wf78bj49cdh7r3x81hn15c4pihxih8l59xxrpgdhp69268c"; depends=[data_table snpStats]; }; GeoBoxplot = derive2 { name="GeoBoxplot"; version="1.0"; sha256="164dh49ac3fx38fdglv32lmz92ca8jdd98cbhz6mxsk8r0jcladw"; depends=[]; }; GeoDE = derive2 { name="GeoDE"; version="1.0"; sha256="0wawkzj0344pprm8g884d7by8v74iw96b109rgm7anal48fl30im"; depends=[MASS Matrix]; }; + GeoFIS = derive2 { name="GeoFIS"; version="1.0.1"; sha256="09kn2sydz9fn97kbw66y7rqda78bpqyfd0pjmapxljm56hwivvlf"; depends=[BH data_tree FisPro foreach nnls R6 Rcpp Rdpack rgeos sp]; }; GeoLight = derive2 { name="GeoLight"; version="2.0.0"; sha256="1i49hyj3f5rcw0s6j2csnfwc6mnp5zn44vxjnk05wdkpw6dpvx5i"; depends=[changepoint fields maps MASS]; }; - GeoMongo = derive2 { name="GeoMongo"; version="1.0.1"; sha256="19wim724sgmxx9rd5yvmqdml0hppb92b8qvpl5zqrlnzxzm0ih5x"; depends=[data_table geojsonR R6 reticulate]; }; + GeoMongo = derive2 { name="GeoMongo"; version="1.0.3"; sha256="0m5nz5q81jz2v2bl2dbgdbdprrkckxr2c67qn0cg9vms0pi3fawr"; depends=[data_table geojsonR R6 reticulate]; }; GeoRange = derive2 { name="GeoRange"; version="0.1.0"; sha256="0krj9570wkhdvpaqkq3nf0maglqd44mpwn4v1bymvgpk1i1wf5p3"; depends=[moments proj4 raster sp velociraptr]; }; - GeoTcgaData = derive2 { name="GeoTcgaData"; version="0.2.4"; sha256="03m669vy0yj9rj524dkrgkqyhjzwc0xckm3zd1272a48jyc1jywd"; depends=[data_table]; }; - GeodRegr = derive2 { name="GeodRegr"; version="0.1.0"; sha256="1wr2n1lkn42vix9jfpw1k7y70lvl3qbqzm0kzvq6yyxnl30sirgs"; depends=[zipfR]; }; + GeoTcgaData = derive2 { name="GeoTcgaData"; version="1.0.1"; sha256="1055qdnf003j7pg0mphwk2ilghnyz7i3yvdy5yj3yjz96drapl3p"; depends=[cqn data_table magrittr plyr]; }; + GeodRegr = derive2 { name="GeodRegr"; version="0.2.0"; sha256="029yclgi4np000yh42j68v32m32lq2hmkh94q33hh1qkx8rilfa7"; depends=[MASS zipfR]; }; + GeodesiCL = derive2 { name="GeodesiCL"; version="1.0.0"; sha256="1i3i6vlh3nnb7z6qzh2cd6cqka78bfdly952x5ryl7cb2590a4pc"; depends=[dplyr htmltools leaflet leafpop magrittr mapview profvis readr rgdal sp tibble]; }; GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; - GerminaR = derive2 { name="GerminaR"; version="2.1.1"; sha256="0am5ga4szk7xk2jkzn8djlg0chsk32ng96bgkk3v9k4gj1jm64ar"; depends=[agricolae dplyr DT ggplot2 purrr shiny tibble tidyr]; }; + GerminaR = derive2 { name="GerminaR"; version="2.1.2"; sha256="1ypn1lwzilyc8wqlbhxs158r9gj6lphqvrhcnsb3xlf2ki21dkm9"; depends=[agricolae dplyr DT ggplot2 purrr shiny tibble tidyr]; }; GetBCBData = derive2 { name="GetBCBData"; version="0.6"; sha256="0dwkps7396rkk5fsh8ynl1l9465s6zm5mind16a5y2n8swi2ndyk"; depends=[curl dplyr furrr future jsonlite lubridate memoise purrr RCurl readr stringr]; }; GetDFPData = derive2 { name="GetDFPData"; version="1.6"; sha256="1yxf1i5bipz16pbydl6qxlalh2zpdiigbxd1qczbjc1z78bl5727"; depends=[crayon curl dplyr lubridate readr reshape2 stringr tibble xlsx XML]; }; GetDFPData2 = derive2 { name="GetDFPData2"; version="0.5"; sha256="0grriq5a6n36gbb24cwajrm3971dqvc0ascdgych9wqdj23c3gjr"; depends=[curl dplyr lubridate magrittr memoise purrr RCurl readr rvest shiny stringr tidyr writexl xml2]; }; - GetFREData = derive2 { name="GetFREData"; version="0.6"; sha256="00p8d3ssi51ayrm8jkjgd2jabvgwdpdxkyspamvnczb7yy3csmp8"; depends=[curl dplyr lubridate magrittr memoise purrr readr rvest stringr tidyr XML xml2]; }; + GetFREData = derive2 { name="GetFREData"; version="0.7"; sha256="134aw3dginxv0b1bvrfm71qyfg8a01d87f2bnagcsksg7403npia"; depends=[dplyr lubridate magrittr purrr readr rvest stringr XML xml2]; }; GetLattesData = derive2 { name="GetLattesData"; version="1.4"; sha256="129hnhmw8aw81whyj3g7npwgmg4fmvsji9h2xfg78nrp0abjxijv"; depends=[curl dplyr readr stringdist stringr XML]; }; GetQuandlData = derive2 { name="GetQuandlData"; version="0.1.0"; sha256="1g1as4m853ab1wp57rzqm0552g0vm7kxzypibv0xywc85084pnmc"; depends=[dplyr jsonlite memoise purrr readr scales stringr]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; @@ -1885,29 +1947,35 @@ in with self; { GibbsACOV = derive2 { name="GibbsACOV"; version="1.1"; sha256="1ikcdsf72sn1zgk527zmxw3zjhx0yvkal6dv001cgkv202842kll"; depends=[MASS]; }; Gifi = derive2 { name="Gifi"; version="0.3-9"; sha256="0rwyj60cldf3k118cnc5px16dc5p5bfxgl0w2m1lh6rsqlmza25a"; depends=[colorspace]; }; GillespieSSA = derive2 { name="GillespieSSA"; version="0.6.1"; sha256="0li0jqnbl9rfj8gbspq7fv327fii53rh93ffsxpic7804rmrnbi7"; depends=[]; }; - GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.7"; sha256="1kggacjfklzbclyncbxrlk97x0di2vfm2z9sl63hlfdn1vy3gvid"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; + GillespieSSA2 = derive2 { name="GillespieSSA2"; version="0.2.8"; sha256="03ym8qx5yc1a6j9l973lc0rjzs8hiax8fq13j7m1fcb1pvnbvar5"; depends=[assertthat dplyr dynutils Matrix purrr Rcpp RcppXPtrUtils readr rlang stringr tidyr]; }; + Gini = derive2 { name="Gini"; version="0.1.0"; sha256="0858mlh8pwylnnb13y40wscq08gcx1cgwjn88wv5vkim5jn4bigi"; depends=[]; }; GiniDistance = derive2 { name="GiniDistance"; version="0.1.0"; sha256="0jq1dwpsvh3k25lawvzf9ij72jsspzyqsbnrphz8aqwi1dkm3851"; depends=[energy randomForest Rcpp RcppArmadillo readxl]; }; GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; + GlarmaVarSel = derive2 { name="GlarmaVarSel"; version="1.0"; sha256="080v2qckihhacclxi2zscslbwbc6179pc7g02lyqaicf9wrsr8ff"; depends=[ggplot2 glmnet Matrix]; }; GlmSimulatoR = derive2 { name="GlmSimulatoR"; version="0.2.4"; sha256="1f24wkqxpdh4rfdhc4xh5jzbczqaib5nkvq4a6gx9wzw1ssdhpnd"; depends=[assertthat cplm dplyr ggplot2 magrittr MASS purrr statmod stringr tweedie]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; GlobalOptions = derive2 { name="GlobalOptions"; version="0.1.2"; sha256="0gkm77w6db9ajyncy1xdcivplap06a51zi99m009kylccschd2a7"; depends=[]; }; GmAMisc = derive2 { name="GmAMisc"; version="1.2.0"; sha256="1rdypld7viski65kqh5m6jhmxgxx8mc3dn8kvy710h5wsii3nn04"; depends=[caTools classInt cluster coin corrplot DescTools dismo ggplot2 ggrepel gridExtra Hmisc InPosition kimisc lsr maptools plyr pROC raster RcmdrMisc rgdal rgeos sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; Gmedian = derive2 { name="Gmedian"; version="1.2.6"; sha256="1kb60f9r9lq5blv07jjln1j5fq1whjcc54zn7bglpp4hl4f74j5d"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; - Gmisc = derive2 { name="Gmisc"; version="2.0.2"; sha256="05pzp1j7s3k52khpmr52ycjc56iwl4jm25dwavv10n2sgfl8mlaq"; depends=[abind checkmate forestplot glue Hmisc htmlTable knitr lattice lubridate magrittr Rcpp rmarkdown stringr XML yaml]; }; + Gmisc = derive2 { name="Gmisc"; version="2.1.0"; sha256="1cvmv2kk5z1hlsh1g7b22aqfvx2xg8z3fy9k1bjncrnzq7pshyhc"; depends=[abind checkmate forestplot glue Hmisc htmlTable knitr lattice lubridate magrittr Rcpp rmarkdown stringr XML yaml]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-1"; sha256="0xygsdmggl35fafyp431mkwalwixw2r3f32qll1pf72dfwd8y8d3"; depends=[KernSmooth]; }; + GofCens = derive2 { name="GofCens"; version="0.91"; sha256="1imf52isvvyf0p1mbj4cbwn3d6gn02vnmzw7biwmy29r45s6wghx"; depends=[actuar eha fitdistrplus ggplot2 gridExtra survival survsim]; }; GofKmt = derive2 { name="GofKmt"; version="2.2.0"; sha256="1v9n1hfracincgaip7pym2l9h54azajw4fmsld0ff2rsd5np362z"; depends=[ggplot2 Rcpp RcppArmadillo Rsolnp]; }; GomoGomonoMi = derive2 { name="GomoGomonoMi"; version="0.1.0"; sha256="16kvf355yzpv0z2rndc5f50pxjnav6ld48j40vyip4h353wpwaks"; depends=[glue htmltools]; }; GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.3"; sha256="1d0xkmkcfcwx0qs8m4b9dgrbkg1qpb859mmzg4d1rww8rc0wxh9h"; depends=[classInt corrplot]; }; GoogleKnowledgeGraphR = derive2 { name="GoogleKnowledgeGraphR"; version="0.1.0"; sha256="1jxiq1s48skn43pydsw8s67hf70v9fhhw2drcx9vni3c3szs44qd"; depends=[curl jsonlite]; }; - GpGp = derive2 { name="GpGp"; version="0.3.2"; sha256="0rypy32j0m3zqxgdlcylf5qjwgz189xyjj28irscaxpzggmf0488"; depends=[BH FNN Rcpp RcppArmadillo]; }; + GpGp = derive2 { name="GpGp"; version="0.4.0"; sha256="1b8cda2k67bpxllq94mmr6nn50884v9laci5n9kd7hmiky16q8na"; depends=[BH FNN Rcpp RcppArmadillo]; }; Grace = derive2 { name="Grace"; version="0.5.3"; sha256="0r41zvgdd5rqm15axqqssik6plwy7snpgw8m32labkfn3f0pp7n0"; depends=[glmnet MASS scalreg]; }; + GramQuad = derive2 { name="GramQuad"; version="0.1"; sha256="1wdwz5hs42kqpmd7hrg2bkcm38rzi6fczj85s9ansgc7b8j77zzs"; depends=[pracma]; }; GraphPCA = derive2 { name="GraphPCA"; version="1.1"; sha256="0x6j3lyd70zc0c1al1407ma8crzi174d5dqkz6lx4vx24knrlhbs"; depends=[FactoMineR ggplot2 ggplot2movies scatterplot3d]; }; GrapheR = derive2 { name="GrapheR"; version="1.9-86-3"; sha256="0wpq7w4lclkzj9ffmqwk2qp5r6kwggh7by47lvhmai4j8g2ha56c"; depends=[]; }; GrassmannOptim = derive2 { name="GrassmannOptim"; version="2.0"; sha256="05r5zg4kf3xd6pp56bl8ldchdxvspxkdfd33b623hndjhn4lj2lq"; depends=[Matrix]; }; + GreedyEPL = derive2 { name="GreedyEPL"; version="1.2"; sha256="19bgrgzb7jdqpljcbhr3d98y331k1b8fbwgcipak6zkhk2vr6vqz"; depends=[Rcpp RcppArmadillo]; }; GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.4"; sha256="0j2grrnd4yn4d1ly62dzqq0y7l7mh3lpnlfpf5n41a9w489m03hw"; depends=[checkmate GreedyExperimentalDesignJARs kernlab nbpMatching Rcpp rJava survey]; }; GreedyExperimentalDesignJARs = derive2 { name="GreedyExperimentalDesignJARs"; version="1.0"; sha256="14i6m5qlh1fca9xmzid01hicd3bkf6rzl139ss78gvw544zrapw7"; depends=[rJava]; }; Greg = derive2 { name="Greg"; version="1.3.4"; sha256="1s46arnraj9xc98kxj0av64jjg0khxjrvgj1gjqz5f6bw2bxmkm3"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; + GreyModel = derive2 { name="GreyModel"; version="0.1.0"; sha256="0vxl4kgihcyl96qiz6sz5icznaa1jpsqqbn1irwmzyngwsh1qvzw"; depends=[]; }; GridOnClusters = derive2 { name="GridOnClusters"; version="0.0.8"; sha256="16wr7zssiy6y0hvg2s7vhy30qxq5ja8yplv8xncn6iz8giy1wdww"; depends=[cluster dqrng fossil plotrix Rcpp Rdpack]; }; GrimR = derive2 { name="GrimR"; version="0.5"; sha256="005ywc31yn1cs54kjlkrryw0s7zm8dqqfjkdlkm4s1sbc9r3mssz"; depends=[car]; }; GroupBN = derive2 { name="GroupBN"; version="1.2.0"; sha256="0x41x7npaawnh6nxh4d4vmv2zwzc6c5ijrhh6fdpwzl4p75qlh1x"; depends=[arules bnlearn ClustOfVar magrittr MLmetrics PCAmixdata plyr PRROC rlist stringr visNetwork zoo]; }; @@ -1916,11 +1984,10 @@ in with self; { GroupTest = derive2 { name="GroupTest"; version="1.0.1"; sha256="1v2230mw0irsr5y8n45g8sd362jp7f6dy2r532mhflfdqy6i2khs"; depends=[]; }; GrpString = derive2 { name="GrpString"; version="0.3.2"; sha256="14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1"; depends=[cluster plyr Rcpp]; }; GsymPoint = derive2 { name="GsymPoint"; version="1.1.1"; sha256="1fg8vqd86kcpciphmlcxlm0rk01iza7md5y8kcxp9i732n4zn7r8"; depends=[ROCR Rsolnp truncnorm]; }; - Guerry = derive2 { name="Guerry"; version="1.7.0"; sha256="0r92xs1ps48yznc146gqmdvz47zvlqfb14yz2ys8bjlk0wna9agv"; depends=[sp]; }; GuessCompx = derive2 { name="GuessCompx"; version="1.0.3"; sha256="1xbkh1wh2z0n964w8lwi7q4rr7mls0awf5k7n5jjklhq4b6gswic"; depends=[boot dplyr ggplot2 lubridate reshape2]; }; GxEScanR = derive2 { name="GxEScanR"; version="2.0.2"; sha256="0k3avad4b2x4sqv8iilx5a8gkybjlipx50mj0la4kl9xv0azshkd"; depends=[prodlim Rcpp RcppArmadillo]; }; GxM = derive2 { name="GxM"; version="1.1"; sha256="02rv8qb46ylk22iqn9cgh63vkyrg9a8nr1d0d3j5hqhi0wyhc41r"; depends=[minqa nlme Rcpp]; }; - H2x2Factorial = derive2 { name="H2x2Factorial"; version="1.1.0"; sha256="1gwqps3c0bg8bp1za3axgymxa6zc4v3pyvcqs8zhj1s61xx3nvvw"; depends=[]; }; + H2x2Factorial = derive2 { name="H2x2Factorial"; version="2.0.0"; sha256="01if0ps43xhcw6q5khdbvjd0yvvhkcj4gvdx538g2kaxzi3lrj1z"; depends=[mvtnorm]; }; HAC = derive2 { name="HAC"; version="1.0-8"; sha256="04pp3xanw8bm5i3fpxg2j6h4qrff81087jmid5grgzs1pgd59p1c"; depends=[copula numDeriv]; }; HACSim = derive2 { name="HACSim"; version="1.0.5"; sha256="0161h3yhi3bh0jq7x105p3rjlrvl46k4iahfz4k84wsvw3akgk1a"; depends=[ape pegas Rcpp RcppArmadillo]; }; HAPim = derive2 { name="HAPim"; version="1.3"; sha256="03qy0pxazv3gdq3fck7171ixilb9zi1dwnvc4v7d726g0lvn80pg"; depends=[]; }; @@ -1932,7 +1999,8 @@ in with self; { HCD = derive2 { name="HCD"; version="0.1"; sha256="158szwhpxwj2dj7sibyh8l92dk9cmy6acapmk8wf5hmfybdpgbsh"; depends=[data_table data_tree dendextend irlba Matrix randnet RSpectra stringr]; }; HCR = derive2 { name="HCR"; version="0.1.1"; sha256="14s46dyw3ifp3pwwlcwbbl47i6hy2whjj1n65i28am5a33nycgha"; depends=[data_table]; }; HCTR = derive2 { name="HCTR"; version="0.1.1"; sha256="1hg8mpallwxpmamk6q8x87w5hlqqwvbahfw5zmr9pisiagbwcsay"; depends=[glmnet harmonicmeanp MASS ncvreg Rdpack]; }; - HDBRR = derive2 { name="HDBRR"; version="0.1.8"; sha256="06751z1i3dkaim9rybkvaqa0yaracrfvcjcshnh3q8ap2jl9j8iy"; depends=[bigstatsr MASS numDeriv]; }; + HCmodelSets = derive2 { name="HCmodelSets"; version="1.1.2"; sha256="05w742g89r0hr90awwjqlszib2jjfly52l9c7ag3n22vg4d1ixw1"; depends=[ggplot2 mvtnorm survival]; }; + HDBRR = derive2 { name="HDBRR"; version="1.1.1"; sha256="0l1knpk165wbs235jgdc5rg60l0z2n15yg3cx8whqf71d8fqn5i9"; depends=[bigstatsr MASS numDeriv]; }; HDCI = derive2 { name="HDCI"; version="1.0-2"; sha256="0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz"; depends=[doParallel foreach glmnet iterators lattice Matrix mvtnorm slam]; }; HDCurves = derive2 { name="HDCurves"; version="0.1.0"; sha256="1ifcbwcqgdxicqxcqrsl9kp3zadxhijpwff8ln309378vybr3gh1"; depends=[]; }; HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; @@ -1942,6 +2010,9 @@ in with self; { HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; HDMT = derive2 { name="HDMT"; version="1.0.3"; sha256="15p8n1schk5i708k3h7ly5a8rxhm6jivjdlqkica5mzghl2bqa37"; depends=[fdrtool]; }; HDPenReg = derive2 { name="HDPenReg"; version="0.94.7"; sha256="16kmx3lddjvz8k7sric0s9ajhlgp62gf1zkyiscaf7w0pjwzin28"; depends=[Matrix Rcpp rtkore]; }; + HDShOP = derive2 { name="HDShOP"; version="0.1.1"; sha256="1pryl763jsw31zhginhw9aqgl1879mcarkqkw5pvjp1yxkb06w0z"; depends=[Rdpack]; }; + HDSpatialScan = derive2 { name="HDSpatialScan"; version="1.0.2"; sha256="0j6frhnxbchy2r425zhx952vvdivrpcrq0440rr4mbr4rla2ci4s"; depends=[DT fmsb matrixStats plotrix purrr Rcpp RcppArmadillo rgdal rgeos sp SpatialNP swfscMisc TeachingDemos]; }; + HDTSA = derive2 { name="HDTSA"; version="1.0.0"; sha256="1mphx55ibw8rlv5cz7vr8m3sgyl0qz0nfk26mcnnfsk38x6hl9zc"; depends=[clime Rcpp RcppEigen sandwich]; }; HDclassif = derive2 { name="HDclassif"; version="2.2.0"; sha256="1l5zxhayhzh7q50ycl481hy0br66ylxyvzw1ahmjjrdkm8s3czyj"; depends=[MASS rARPACK]; }; HDclust = derive2 { name="HDclust"; version="1.0.3"; sha256="18l4qp261gj3kscfxs3s03kmb9y5ml31vnpgpm1iy125bks4mr2y"; depends=[Rcpp RcppProgress Rtsne]; }; HDcpDetect = derive2 { name="HDcpDetect"; version="0.1.0"; sha256="0ai35d9df5pmva52sb1rr20f11h0mbal6d179g865b7w6n90kfr1"; depends=[]; }; @@ -1949,15 +2020,16 @@ in with self; { HDoutliers = derive2 { name="HDoutliers"; version="1.0.3"; sha256="167g72b23jpjfhnz2faxia2lma328gvqkrlnz6xizzq7vb7cmb18"; depends=[FactoMineR FNN mclust]; }; HDtest = derive2 { name="HDtest"; version="2.1"; sha256="1c9x4s59762sp7drbm5h1xv22kpifq7p0x3dkrfcd0ficbbma5v8"; depends=[checkmate clime doParallel expm fastclime foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; + HEDA = derive2 { name="HEDA"; version="0.1.5"; sha256="0arya76isiaxmgmhl7q93vmga9apmbkq3scgz7zhgnrkd8mkh0i1"; depends=[dplyr ggplot2 lubridate rlang zoo]; }; HEMDAG = derive2 { name="HEMDAG"; version="2.7.4"; sha256="1dmfy5bbnjmjb4d7430i38z9hvpcrwafj6hw46118hwzcl4b6ldv"; depends=[doParallel foreach graph plyr precrec preprocessCore RBGL]; }; HETOP = derive2 { name="HETOP"; version="0.2-6"; sha256="1fjwyqh7l296pghmc4m81q8icgbhvqvxr61zd638fr46gls3ky2p"; depends=[R2jags]; }; HGMND = derive2 { name="HGMND"; version="0.1.0"; sha256="1iwqssj66q9dfgddzwqmnnpvxnvlrq7p1axm95lpkf3vrpn5rp6b"; depends=[genscore]; }; HGNChelper = derive2 { name="HGNChelper"; version="0.8.1"; sha256="0qwkk5658j4j6w2wgvxkp38cyvscjp93d3zc7gb97vcihqx0ngxa"; depends=[]; }; HGSL = derive2 { name="HGSL"; version="1.0.0"; sha256="1p453xr3d1bmqc6mrmzb0hz9p0gp25m6v6qr0l3bapcf71vzbvq1"; depends=[]; }; HH = derive2 { name="HH"; version="3.1-43"; sha256="0nr3sa6di06cjmljdxfq7bcpnp9d6kna4f9lrv9fk4khr67mrlrf"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; - HHG = derive2 { name="HHG"; version="2.3.2"; sha256="159bs5cxdm770h66fam48451n9krpw2fn5gr397h730x2w7l41ki"; depends=[Rcpp]; }; + HHG = derive2 { name="HHG"; version="2.3.4"; sha256="1ghw1rpf7n0dfclvxm3p02ym247p3rsncj9f9f97892lk9yin29c"; depends=[Rcpp rmarkdown]; }; HI = derive2 { name="HI"; version="0.4"; sha256="0i7y4zcdr6wcjy43lz9h8glzpdv0pz7livr95xb1j4p8zafykday"; depends=[]; }; - HIMA = derive2 { name="HIMA"; version="1.0.7"; sha256="0mvphwmm8gmin933bji2l2gbpjzm42vyc7sdka4xpjfsaal9pp9i"; depends=[doParallel foreach iterators ncvreg]; }; + HIMA = derive2 { name="HIMA"; version="1.1.0"; sha256="0xdi9vc8k9k9ixg9n18lb3k0zpavx0z0076la5bvazlkjkz8rfv6"; depends=[doParallel foreach glmnet HDMT iterators MASS ncvreg survival]; }; HIV_LifeTables = derive2 { name="HIV.LifeTables"; version="0.1"; sha256="0qa5n9w5d5l1kr4827a34581q380xmpyzmmhhl300z1jwr0j94df"; depends=[]; }; HIest = derive2 { name="HIest"; version="2.0"; sha256="0ik55kxhzjyg6z6072iz9nfaj7x1nvf91l1kysgvkjccr6jf3y86"; depends=[nnet]; }; HK80 = derive2 { name="HK80"; version="0.0.2"; sha256="0c8scpzl5xgqm9rlsvh5nl3bz42i5pzvb873j9bn3bi15gcknbny"; depends=[]; }; @@ -1970,7 +2042,7 @@ in with self; { HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; }; HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.2"; sha256="0msin7rq3npz221mvrw3zcs6bwz439six99iblx5p3hkp1n1ljf3"; depends=[Rcpp RcppArmadillo Rdpack]; }; HMMcopula = derive2 { name="HMMcopula"; version="1.0.4"; sha256="1gmvav02r3miaq4jx05qjcgzw5qv6w1j77vck5gpps8p38zcp34m"; depends=[copula doParallel foreach matrixcalc mvtnorm]; }; - HMMextra0s = derive2 { name="HMMextra0s"; version="1.0.0"; sha256="15y5q92x69sn80pc2x7xwbnsfrqpf7cjdja4hkq861jshkksbmg1"; depends=[ellipse mvtnorm]; }; + HMMextra0s = derive2 { name="HMMextra0s"; version="1.1.0"; sha256="067yb9xg1b4z2k0zhjj4wlvlv46c7rxaipyqkc81r30zh4qfrr1c"; depends=[ellipse mvtnorm]; }; HMMmlselect = derive2 { name="HMMmlselect"; version="0.1.6"; sha256="0kvw9nihbmvp19hbz5h8sz9jps5ik2di969jxdbp4ymj735c0fc9"; depends=[HiddenMarkov mclust MCMCpack mvtnorm Rcpp]; }; HMMpa = derive2 { name="HMMpa"; version="1.0.1"; sha256="0c3jmvcklywqsjmskx7zbw4d3l8i6bzr5h741v8iwgyw67mjn37g"; depends=[]; }; HMP = derive2 { name="HMP"; version="2.0.1"; sha256="0233p7gajr2aic0c5snni4g9v1bwn4zd5i3kagxhqxa3mvy5c7wc"; depends=[dirmult doParallel foreach ggplot2 gplots lattice MASS rpart rpart_plot vegan]; }; @@ -1988,18 +2060,18 @@ in with self; { HSAUR2 = derive2 { name="HSAUR2"; version="1.1-18"; sha256="0ggya24clwydi7aligdayds3jpq2ckr4xfm4nik0r6j97x4gl1mj"; depends=[]; }; HSAUR3 = derive2 { name="HSAUR3"; version="1.0-11"; sha256="1p5v655dkvq2wg10s7nrwrgh755zyivayy4x1szc22z77861lj2l"; depends=[]; }; HSDiC = derive2 { name="HSDiC"; version="0.1"; sha256="0wiixb1ylx0l8qfgh5ark6alkdq87xaak1jlxizw1m589vghvqfp"; depends=[glmnet Matrix ncvreg quadprog]; }; + HSEtest = derive2 { name="HSEtest"; version="0.1.0"; sha256="0dzc44icmb1kkjr46siqigy0zpi66189qpwijgmlqwhzrj4yql9c"; depends=[]; }; HSPOR = derive2 { name="HSPOR"; version="1.1.9"; sha256="06lr8l71y5fcqcnmgq7cgiab1pcc98wnqzndbxcbikbh33cx7nxv"; depends=[corpcor npregfast]; }; HTLR = derive2 { name="HTLR"; version="0.4-3"; sha256="1bxgfiwbnvpdw0d6k34c1wc47z6pvx0imnz36c6r99zls5bm129y"; depends=[BCBCSF glmnet magrittr Rcpp RcppArmadillo]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; HTSSIP = derive2 { name="HTSSIP"; version="1.4.1"; sha256="1j2f6f3i4di4bvsk44gxz0narg45ld2rahfn23wpgni5bszy0vb3"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; }; - HURDAT = derive2 { name="HURDAT"; version="0.2.3.2"; sha256="13lq6vdjf5iqwmg61rnq3i6s88q0h54s2dmr2hj0vf8hvisfj0bs"; depends=[dplyr purrr readr rlang rvest tidyr xml2]; }; HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; }; HWEBayes = derive2 { name="HWEBayes"; version="1.4"; sha256="1rbffx6pn031a278ps9aqxcaq8yi73s5kf60za143ysbfxv9dphw"; depends=[MCMCpack mvtnorm]; }; HWEintrinsic = derive2 { name="HWEintrinsic"; version="1.2.2"; sha256="035r5bi7m66g351cmrfmf4cj5qqm4fn5pgy3lzsp3gyp2dv0rkg5"; depends=[]; }; HYRISK = derive2 { name="HYRISK"; version="1.2"; sha256="1ngwwzv1pavmscpca3ryzfxzd9rppsh0sm7k4sp2kzc9c0bix4xp"; depends=[kerdiest pbapply reliaR rgenoud sets triangle]; }; - HaDeX = derive2 { name="HaDeX"; version="1.2.1"; sha256="0y380z92blxq52hg20cw71g6vs962xpgk5x2mvl35sz27lm4fr4f"; depends=[data_table dplyr DT ggplot2 gsubfn latex2exp readr readxl reshape2 shiny stringr tidyr]; }; + HaDeX = derive2 { name="HaDeX"; version="1.2.2"; sha256="1qj6n03pd5kd5ff5h4v8wmnqxxylsxx1p6i88nahqkah2mzg9jdr"; depends=[data_table dplyr DT ggplot2 gsubfn latex2exp readr readxl reshape2 shiny stringr tidyr]; }; HadamardR = derive2 { name="HadamardR"; version="1.0.0"; sha256="0nr8m6fchpmlvhyisb61y0fymjjrk2k1sd67r14n87sgn3mafh4a"; depends=[numbers openxlsx]; }; HadoopStreaming = derive2 { name="HadoopStreaming"; version="0.2"; sha256="1l9msaizjvnsj1jrpghj4g057qifdgg6vbqhfxhn1fiqdqi2056q"; depends=[getopt]; }; HandTill2001 = derive2 { name="HandTill2001"; version="1.0.1"; sha256="0wgr3rhz1iklirpnzk25afh8fv1qpi2ijmx4xwzplw3w3qir4yv6"; depends=[]; }; @@ -2009,15 +2081,15 @@ in with self; { HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.7.2"; sha256="0g10jh71yp0pcag44z409xqb6d941l7y887a632962bk5rgn6q5p"; depends=[mice Rcpp Rsolnp]; }; HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; - HeckmanEM = derive2 { name="HeckmanEM"; version="0.1.1"; sha256="1v0359c2v514k139kgjjww3f0z4xgr5s4l0649xxm9hdq7qs6667"; depends=[MomTrunc mvtnorm PerformanceAnalytics sampleSelection]; }; + HeckmanEM = derive2 { name="HeckmanEM"; version="0.1.2"; sha256="1q9sad19ccq30ggvcj1byhka4dwa94k6z31ig56vi3031nx2424n"; depends=[MomTrunc mvtnorm PerformanceAnalytics sampleSelection]; }; HellCor = derive2 { name="HellCor"; version="1.3"; sha256="1bzc2ipm7vw7s849d43lcs0xrk2rs67h223dn9kahqg152mmknza"; depends=[energy FNN orthopolynom]; }; - HelpersMG = derive2 { name="HelpersMG"; version="4.5"; sha256="1c4m5kl0ppmwm561vzj734rypfxcnmx6i3ii32qmzhnp592n3g0z"; depends=[coda lme4 MASS]; }; - HeritSeq = derive2 { name="HeritSeq"; version="1.0.1"; sha256="0l1saxwj99xwkzcy43v0k9sicqwpw9gc8ywxpablagcddfj05pi3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; + HelpersMG = derive2 { name="HelpersMG"; version="4.7-0"; sha256="0rw9yd7jqw5g8qbkf3dsc41z2dbndln321cb3ny2kj1wjrb5j145"; depends=[coda lme4 MASS Matrix]; }; + HeritSeq = derive2 { name="HeritSeq"; version="1.0.2"; sha256="0jzf3pq43lllxvvmf0rqzxz9fx6931mgb0ipminlw1iakz8wa6w3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; HeterFunctionalData = derive2 { name="HeterFunctionalData"; version="0.1.0"; sha256="0qrfmxwrxn0rd2ncy3afhraf7m0010nf9739jkj19h1j5vksi9n1"; depends=[]; }; HeteroGGM = derive2 { name="HeteroGGM"; version="0.1.0"; sha256="0cfzqhbnsy2254m1n6vbpcxlmiqw7cs26v81f5wyawlyyvdydmxi"; depends=[igraph MASS Matrix]; }; HextractoR = derive2 { name="HextractoR"; version="1.4"; sha256="1wp7n92wgrjyklq159ymrw8y5ads6lhj2fcz54rzdnccdyx5naxi"; depends=[doParallel foreach seqinr]; }; HiCfeat = derive2 { name="HiCfeat"; version="1.4"; sha256="1imz7zfax74aakzk8457jww9r66qxpr2ncyvjj0y5paxdn76lnnq"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; - HiClimR = derive2 { name="HiClimR"; version="2.1.9"; sha256="003lyq9pr5adpx9p11w3dsw7aryza25xbzqh04jw67gcpaff2ng0"; depends=[ncdf4]; }; + HiClimR = derive2 { name="HiClimR"; version="2.2.0"; sha256="0pq2rlxqm0jip9fyyqlqnxig5s886fk31g0c2plvddg139q2sd6z"; depends=[ncdf4]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; @@ -2026,7 +2098,7 @@ in with self; { HierDpart = derive2 { name="HierDpart"; version="1.5.0"; sha256="10sphan6slzj6bsbzff4z7pglkjhv6xy719dm7594fmgqfjz0ici"; depends=[ade4 adegenet ape diveRsity entropart GGally ggplot2 hierfstat mmod pegas permute reshape2 tibble vegan]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighestMedianRules = derive2 { name="HighestMedianRules"; version="1.0"; sha256="01fj3xgrb9iav5v91bq04hzv9nhnwy8l00dx6yykghwvzjwfv3ih"; depends=[RMallow]; }; - HistDAWass = derive2 { name="HistDAWass"; version="1.0.4"; sha256="18l9hjkdcwk1lh19z240s9rqg49v9gpydllcaa5jndysylx8ybjr"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; + HistDAWass = derive2 { name="HistDAWass"; version="1.0.6"; sha256="1h5bbxv8lgmwvlf85v8p6fyy959l36pnzjkg0d6b9kz77whlqrk1"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; HistDat = derive2 { name="HistDat"; version="0.2.0"; sha256="06zxsja8qk48q9lrr9fbk4sbpidysp31mcirxfr12l348lc9zf10"; depends=[]; }; HistData = derive2 { name="HistData"; version="0.8-7"; sha256="0cs231w4x8sw2dwy04xwiw01rr2brfz9smwmplw5g1jv1d7afnlj"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; @@ -2036,9 +2108,11 @@ in with self; { HoRM = derive2 { name="HoRM"; version="0.1.3"; sha256="09dkpzlwkkdn0z8g9fbb7hzxbrrq70x9v1zx254svck2jyk0hx58"; depends=[ggplot2 MASS orthopolynom quantmod rsm]; }; Holidays = derive2 { name="Holidays"; version="1.0-7"; sha256="1srfbhlrf0pd6gzhp4hbic555lb7camk084rn1qz2g7fjvyijqiq"; depends=[TimeWarp]; }; Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; - Hotelling = derive2 { name="Hotelling"; version="1.0-5"; sha256="1ism2lzi2kmi62gp319qsi64pj2kj5sfh50f1qnv8vgdkb76bdx5"; depends=[corpcor]; }; + Hotelling = derive2 { name="Hotelling"; version="1.0-8"; sha256="04x2x3anwf4d71dm7x6y08ysk7ygysshc0avisyshbl52x39l8si"; depends=[corpcor]; }; + HotellingEllipse = derive2 { name="HotellingEllipse"; version="0.1.1"; sha256="0wdsqnxqvpm124kfksflkddd55hdrfcf8hwq7l6j57f4szwqw7k2"; depends=[dplyr FactoMineR ggforce ggplot2 lifecycle magrittr purrr tibble]; }; + HuraultMisc = derive2 { name="HuraultMisc"; version="1.1.1"; sha256="0bi1y7icrg0f4n9ah9dsrijnfr39bqg3799rz4hccd1b061f0rvj"; depends=[cowplot dplyr ggplot2 HDInterval Hmisc magrittr reshape2 rstan tidyr]; }; HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; - HyRiM = derive2 { name="HyRiM"; version="2.0.0"; sha256="1wif31xvrwz0dr6z0hfn1v2fxi8rxws52al6h9rlbzciy6xyl7a3"; depends=[compare grImport2 orthopolynom purrr Rglpk]; }; + HyRiM = derive2 { name="HyRiM"; version="2.0.1"; sha256="09njf2gscn13x5mfd7g76cam9bzbibcnc383gb8h0kks7x16d3p9"; depends=[compare grImport2 orthopolynom purrr Rglpk]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; HydeNet = derive2 { name="HydeNet"; version="0.10.11"; sha256="1qi87k2drizqba1nz8psh697ks8ai8xz492kzsrs76xlxpbk1i9k"; depends=[checkmate DiagrammeR dplyr graph magrittr nnet pixiedust plyr rjags stringr]; }; HydroCode = derive2 { name="HydroCode"; version="1.0.2"; sha256="1igshik28xcxrdg116vs9s2yfbz5fik9xvlgfkgai3w9qj0x1h5q"; depends=[sp]; }; @@ -2069,14 +2143,13 @@ in with self; { ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; ICCbin = derive2 { name="ICCbin"; version="1.1.1"; sha256="1pzlaj7w98pgrlg3zvpmdv0dpgi5gih0j73qv86ak75fkxvrnzzw"; depends=[]; }; ICD10gm = derive2 { name="ICD10gm"; version="1.2.2"; sha256="1ljhlnb2zqmdddyv2wqmkj29k05xb5laf9vk9d5vqbmlpwl2hqqg"; depends=[dplyr magrittr purrr rlang stringi tibble tidyr tidyselect]; }; - ICDS = derive2 { name="ICDS"; version="0.1.1"; sha256="1jb98xi37jcf6nl5lx2ip9614l4w7lz7v53jpcbdj0ymqbfx1s70"; depends=[graphite igraph metap org_Hs_eg_db]; }; + ICDS = derive2 { name="ICDS"; version="0.1.2"; sha256="1bnj2ngh2n2yhgx8z9kawnpgkfgqw3b8xw9wkhimws4f2ir4k1zl"; depends=[graphite igraph metap org_Hs_eg_db]; }; ICE = derive2 { name="ICE"; version="0.69"; sha256="04p8lakaha28mdh965w0ppyxfrz5ssi1n9xifvsbn3ihdra67rip"; depends=[KernSmooth]; }; ICEbox = derive2 { name="ICEbox"; version="1.1.2"; sha256="170gg2fg9307yc2b25lsj8d1zla0frjxl47qh0njlqlrpi8jmm7i"; depends=[sfsmisc]; }; ICEinfer = derive2 { name="ICEinfer"; version="1.3"; sha256="0hg1vdg9clsk24lqdh89dfzlb0mnig690wq06pzd5nl9mr6dlvns"; depends=[lattice]; }; - ICGE = derive2 { name="ICGE"; version="0.3"; sha256="0xin7zml1nbygyi08hhg3wwr2jr1zcsvrlgia89zp4xanxlzgaqa"; depends=[cluster MASS]; }; + ICGE = derive2 { name="ICGE"; version="0.4.1"; sha256="0w6hbi3h98q6gsxqbb43p95v6xykgrasxcjivwm8hw9fly4avxyi"; depends=[cluster fastcluster MASS]; }; ICGOR = derive2 { name="ICGOR"; version="2.0"; sha256="18fn10f5nqqbrfibqmp602nqpx794fy3gpxp1bd10xn48llhqfc4"; depends=[ICsurv MASS pracma survival]; }; ICODS = derive2 { name="ICODS"; version="1.0"; sha256="13wi4mqdwdrjfjh42sjifc6vlkj6jlm4z0x6680xdzkwq8byipi9"; depends=[MASS]; }; - ICON = derive2 { name="ICON"; version="0.4.0"; sha256="02ilj6mwgzam5pgd3iadpwpyvigbq2y113lh099yrmcq325jb8z5"; depends=[network]; }; ICRanks = derive2 { name="ICRanks"; version="3.1"; sha256="1vwzqkjg7i5hm96s8frp72n6xqadlsawzr1wby1fhsxl2m5f1797"; depends=[gmp multcomp Rcpp]; }; ICS = derive2 { name="ICS"; version="1.3-1"; sha256="0x3cwhvzcibgyb8gqy6dc6lgnvbf6x8425zai57g8yn5i6zzc1li"; depends=[mvtnorm survey]; }; ICSKAT = derive2 { name="ICSKAT"; version="0.1.0"; sha256="148sw8yg1ww39sdn5r77gx70nz40igz2rw9fwfj2nyq92j1l020k"; depends=[CompQuadForm dplyr magrittr Rcpp RcppEigen rje survival tidyr zoo]; }; @@ -2084,7 +2157,6 @@ in with self; { ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; }; ICSS = derive2 { name="ICSS"; version="1.1"; sha256="0kmsw8347ka5n0qncx7hqgs153ihkmxbl0wc5kqlb2l42sl6rp8x"; depends=[rstack]; }; ICSShiny = derive2 { name="ICSShiny"; version="0.5"; sha256="0a13vps0mkv5qs6qnl7ar0mdbkbd7i1c6kgwahmkb3id3n9bw0cl"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; - ICSsmoothing = derive2 { name="ICSsmoothing"; version="1.2.5"; sha256="08m8p6y5zk54ha3wp5x9xbx6f2xkkqx232hsan1f1s8k9j3q5avd"; depends=[ggplot2 polynom]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; ICcalib = derive2 { name="ICcalib"; version="1.0.8"; sha256="1y2w12ka0qxh9dg6dlcrnndz1xrv8gkppan64qkyk5vjrh18ajz4"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; ICcforest = derive2 { name="ICcforest"; version="0.5.1"; sha256="0z511d3drq5flxwvx7kjv3v5yanjhvs5ayvkm996jbiz3k49a12v"; depends=[icenReg ipred partykit survival]; }; @@ -2096,44 +2168,47 @@ in with self; { IDPSurvival = derive2 { name="IDPSurvival"; version="1.2"; sha256="0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw"; depends=[gtools Rsolnp survival]; }; IDPmisc = derive2 { name="IDPmisc"; version="1.1.20"; sha256="0zy6mxqa8arq0vvhsdcifzm3085c23rnwa1n36fhircph1xwvfdw"; depends=[lattice]; }; IDSA = derive2 { name="IDSA"; version="2.1"; sha256="0ld2359ksnw9jrjicnqikh5r321mfy2i7vzlhh9phm60k0qf5j98"; depends=[GD ggplot2 kableExtra reshape2]; }; + IDSL_IPA = derive2 { name="IDSL.IPA"; version="1.2"; sha256="1jp06c43skp49q2hm0gjgv5gxih80cncl4vxszv4vxxr7c4lm3l2"; depends=[BiocManager doSNOW foreach ggplot2 gridExtra mzR png Rcpp readxl]; }; + IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.12"; sha256="0gkicafnzq8aq9bmbbr9n868sh91dwkhs1dk4wry5vkbfaawfxis"; depends=[doParallel foreach igraph spatstat_core spatstat_geom]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; IDmeasurer = derive2 { name="IDmeasurer"; version="1.0.0"; sha256="0n7rziaaxm9dqixmw6rxgq9dwnwdl3dsdnpd9s59k5skdlaxnl5m"; depends=[infotheo lme4 MASS]; }; IDmining = derive2 { name="IDmining"; version="1.0.7"; sha256="1yv8lclkb1ws2n4yd3l561lqhp25vlw0f6d073yg04pidr2dpg2a"; depends=[data_table doParallel foreach]; }; IETD = derive2 { name="IETD"; version="1.0.0"; sha256="0avhyw0zcb8vj0nqfy41yq5kcd8yf9rmaawdvfcy5rqwxmi1mw9l"; depends=[doParallel dplyr foreach ggplot2 lubridate Rdpack]; }; - IFAA = derive2 { name="IFAA"; version="1.0.1"; sha256="11gs84qvz6hbj23iihn19w9q4bv8gacf52dsknx1v0zcpd7jjwc7"; depends=[doParallel expm foreach future HDCI mathjaxr Matrix picasso qlcMatrix rlecuyer]; }; + IFAA = derive2 { name="IFAA"; version="1.0.2"; sha256="1jn113scr85lx0sqwrz2sbay7i2i2vdbg4w18l31p2q47x963lfy"; depends=[doParallel expm foreach future HDCI mathjaxr Matrix picasso qlcMatrix rlecuyer]; }; IFC = derive2 { name="IFC"; version="0.1.1"; sha256="0nr05xz5i9cv4ffjnrxxvxp1mwnym7bmz9jq83z5gi6ca42128xv"; depends=[DT gridExtra jpeg KernSmooth lattice latticeExtra png Rcpp RcppProgress tiff visNetwork xml2]; }; IFP = derive2 { name="IFP"; version="0.2.4"; sha256="066wz6bjqcvq22gjg2wcmglp798f87rsc8yhm13p0dic3arb5ph6"; depends=[coda haplo_stats]; }; IGG = derive2 { name="IGG"; version="1.0"; sha256="1cibb9z18xc1zx1813lk14n6p5am84hm7w0hkrsif4j3p89lrwif"; depends=[GIGrvg glmnet MASS Matrix pscl]; }; IGP = derive2 { name="IGP"; version="0.2.0"; sha256="1hsyl6cjm84w4f4v0gw4hi5y483r8v78xb3k3h1ixix9ymjqr8y5"; depends=[R6 reticulate]; }; IGST = derive2 { name="IGST"; version="0.1.0"; sha256="12ycrfsgwakaj3k39k1j4ky58wr7a2ibyz6j9cznvjjv6cgz9zg5"; depends=[BootMRMR e1071]; }; - IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; + IHSEP = derive2 { name="IHSEP"; version="0.2"; sha256="1qb6mn9bsd69pifmphywmj6j71v14wklydw23pbj5980c5hrlwsj"; depends=[lpint Rcpp]; }; + IIVpredictor = derive2 { name="IIVpredictor"; version="0.1.0"; sha256="15361j8b60jj3bh8cjxs39d9bir1aywy9bd254s5w94cakhy0ld5"; depends=[lavaan R2jags]; }; ILS = derive2 { name="ILS"; version="0.2"; sha256="0lj3ripkaq6jn00lpxjihjhm8g1gbkppmb1y9kkrymphg80k1by7"; depends=[depthTools fda_usc lattice MASS multcomp]; }; IMAGE = derive2 { name="IMAGE"; version="1.0"; sha256="0xgrja7qhklcmbm0zz5xg94gw5kl05nk3v77l7vxq2d5sk0435g3"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; + IMD = derive2 { name="IMD"; version="1.0.2"; sha256="13l15gdwib09gs5bqga1hr5z9vym0f9jiki4il22mrzkhw34y2j8"; depends=[devtools dplyr Hmisc httr janitor readODS readr readxl rlang tibble tidyr]; }; IMEC = derive2 { name="IMEC"; version="0.2.0"; sha256="1k85pr6s6lysn53n59i8rcdhyg7r3il5avbckvvz43p6lh0fgxpy"; depends=[igraph IsingSampler qgraph]; }; IMFData = derive2 { name="IMFData"; version="0.2.0"; sha256="1mlxpsbyvh1zi8ivdblbd58zfv5hflnknbasz5z8xk9911czrn6p"; depends=[httr jsonlite plyr]; }; - IMIFA = derive2 { name="IMIFA"; version="2.1.5"; sha256="12fzq0fg3wrk4fmi8kdmifdx1fnj1laf0311smgn3q2mbqihamx5"; depends=[matrixStats mclust mvnfast Rfast slam viridisLite]; }; + IMIFA = derive2 { name="IMIFA"; version="2.1.6"; sha256="03nmn3q1j30p9pkpdacsjvphbba6hjkyw2w9nmaz9pbygd20qjib"; depends=[matrixStats mclust mvnfast Rfast slam viridisLite]; }; IMIX = derive2 { name="IMIX"; version="1.1.4"; sha256="0xdf221l53i4kfln4xnqv2lv3yg3kajmnm5nyal1z25p22czcdl9"; depends=[crayon ggplot2 MASS mclust mixtools mvtnorm]; }; IMP = derive2 { name="IMP"; version="1.1"; sha256="0ilvgz2bngffyx6ifqqx1snsn6mmq7rx3wg44093yrviaw39qdfv"; depends=[dplyr ggplot2 shiny tidyr]; }; IMPACT = derive2 { name="IMPACT"; version="0.1.1"; sha256="0ai22gvmfj9j00cw742szfqqay63b5lmnszkwwdfdvidls43v0bm"; depends=[]; }; IMTest = derive2 { name="IMTest"; version="1.0.0"; sha256="0n0swbi051cr7mrjmszqg79hxa38ccyq69ws8c37ixwb0lpxmx48"; depends=[lme4 ltm MASS reshape2]; }; - IMaGES = derive2 { name="IMaGES"; version="0.1.1"; sha256="1w6wigwqji758m18kp6w6x1lchabrksnlnbp0r7l8wkdk36j2n5k"; depends=[BH ggm graph igraph lavaan Rcpp RcppArmadillo Rgraphviz sfsmisc]; }; IMak = derive2 { name="IMak"; version="2.0.1"; sha256="0spq7h9l2nnng1jiflpll8vbgmdhrpwi426v70qjslg5if1izcpm"; depends=[imager]; }; IMmailgun = derive2 { name="IMmailgun"; version="0.1.2"; sha256="09acmi6xj186fb8nhj8q0nxmkp2p32a1l95glzvz84gax4xakhz8"; depends=[httr]; }; INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; }; INLABMA = derive2 { name="INLABMA"; version="0.1-11"; sha256="0wzyb3c7zpksqz198kigi4rpblvk0rjamngmyabw5xdpizxdg6zi"; depends=[Matrix sp spdep]; }; - INLAMSM = derive2 { name="INLAMSM"; version="0.2-2"; sha256="1njvcrh6ppx17bxvgf18gzgqddby5fsa35h2xf58w4ikynkgm7l1"; depends=[Matrix MCMCpack sp spdep]; }; - INQC = derive2 { name="INQC"; version="2.0.4"; sha256="06kb07ib4ml5gqi51hkfmilwzf70gpwclb35xsp2f65p96rvj6qb"; depends=[evd gdata suncalc]; }; + INQC = derive2 { name="INQC"; version="2.0.5"; sha256="1gz7gyq5n2bmh18yrg29nz8kmdc0b35chwqxr6y2sggdm8j28akd"; depends=[evd gdata suncalc]; }; INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; INTRIGUE = derive2 { name="INTRIGUE"; version="0.1.0"; sha256="1l1vfl0m4iqniwp4bp1bfjpqhwahg341fpyxhryr0j8lypqaw7si"; depends=[dplyr rlist SQUAREM]; }; - IOHanalyzer = derive2 { name="IOHanalyzer"; version="0.1.4"; sha256="1wp9i4vy40a10y5lj4m2hs2nx5nz1qyqz6gd27284zkydrwhpnxr"; depends=[bsplus colorRamps colorspace colourpicker data_table dplyr DT ggplot2 igraph kableExtra magrittr markdown PlayerRatings plotly RColorBrewer Rcpp reshape2 shiny shinyjs stringi]; }; + IOHanalyzer = derive2 { name="IOHanalyzer"; version="0.1.5.2"; sha256="09id0v0bxibg769wn5fz11rkz2d5wrfhix0c3y94ms6b7nhkg2rd"; depends=[bsplus colorRamps colorspace colourpicker data_table dplyr DT ggplot2 httr kableExtra knitr magrittr markdown plotly RColorBrewer Rcpp reshape2 shiny shinyjs stringi]; }; IOHexperimenter = derive2 { name="IOHexperimenter"; version="0.1.4"; sha256="0aacliznncl488rjsnx02pfj1mchhcyb36v816g959ll38pvc6bk"; depends=[assertthat BH magrittr Rcpp]; }; IPCAPS = derive2 { name="IPCAPS"; version="1.1.8"; sha256="17ifkgjjnvvcc8dp065ng4ad9lr85lcdcb401vi84yy8m2llbypw"; depends=[apcluster expm fpc KRIS LPCM MASS Matrix Rmixmod]; }; IPCWK = derive2 { name="IPCWK"; version="1.0"; sha256="0hah1xl6zli0346jh57rjc5x8vynhaysj0l481rmvznsghv6im23"; depends=[MASS survival]; }; - IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.6"; sha256="1x4igy711ri9lwy7whz0x2qaqqj1ii7y8iki5kjgqvmdjbba8r2r"; depends=[dplyr eeptools GlobalOptions hash kableExtra lubridate testthat]; }; + IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.7.2"; sha256="1xz020w2cx83wcadnjsqlpfyir2apj7bsjpka77pwyg2h2fqc76m"; depends=[dplyr eeptools effsize gtsummary hash kableExtra lubridate stringr testthat tidyverse]; }; IPDfromKM = derive2 { name="IPDfromKM"; version="0.1.10"; sha256="1pqi6cshiha4gnra25fgpggyi42mn2hg25s9m9mh091rn5km44q0"; depends=[dplyr ggplot2 gridExtra readbitmap survival]; }; IPEC = derive2 { name="IPEC"; version="0.1.3"; sha256="0h1b9h33zxx23rj8c9790nsqykwhznavy8hfkgv9gx7nphrsy5ma"; depends=[MASS numDeriv]; }; - IPLGP = derive2 { name="IPLGP"; version="1.2.0"; sha256="0lch3q2r846p22cr69anszcwikw58fwaazvg7gahi90zjwck4dfr"; depends=[ggplot2 sommer]; }; + IPLGP = derive2 { name="IPLGP"; version="1.3.0"; sha256="0yp4rkmircp484c89x856l2fpnmpfbdkvbjaxdpgzqkk95npdmfh"; depends=[ggplot2 sommer]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; + IPMbook = derive2 { name="IPMbook"; version="0.1.2"; sha256="0q9vjzqb1h62d49z9lrzis9vc6fy27ha8pq8hi22jnzc73pqh0aq"; depends=[abind]; }; IPPP = derive2 { name="IPPP"; version="1.1"; sha256="19ccs25fd56ns7ssi51w2jzjd4d57vyimwmfvf27mmigb537bd5y"; depends=[]; }; IPV = derive2 { name="IPV"; version="0.1.1"; sha256="0bd59sfqqz2g6lwzlg3vqpw0y8q989n4q76qr1dvnq847c6fg8wz"; depends=[ggforce ggplot2]; }; IPWboxplot = derive2 { name="IPWboxplot"; version="0.1.0"; sha256="0lyqcjnbissick5hzwrx21pykq4pww9j0i03j0gy43awl1cq5qq8"; depends=[isotone]; }; @@ -2147,20 +2222,21 @@ in with self; { IRTBEMM = derive2 { name="IRTBEMM"; version="1.0.7"; sha256="09siwm2shjb8hhk64r66fspzykzr2r0m011pv8qcl9k7g040mxpi"; depends=[]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; IRdisplay = derive2 { name="IRdisplay"; version="1.0"; sha256="15jbjrihm1mk899357h9xb08iq3xyagds1xb40fmdpkfcmcfqrw9"; depends=[repr]; }; - IRkernel = derive2 { name="IRkernel"; version="1.1.1"; sha256="1y06v3difaiihxfm2abm88nnjzvkla4p346cm1nxmga4iwb2k8gm"; depends=[crayon digest evaluate IRdisplay jsonlite pbdZMQ repr uuid]; }; + IRexamples = derive2 { name="IRexamples"; version="0.0.1"; sha256="12x8wrbkrl2l38xwfb0pi911nq22qd5zgvhvkpbsn7h3lbhg3pqy"; depends=[DisImpact dplyr forcats ggplot2 ggthemes RSelenium rstanarm rvest survey twang]; }; + IRkernel = derive2 { name="IRkernel"; version="1.2"; sha256="14gz3790iv6gg6yi9wslk1yn0jq57yvhxgm840qh818xfkdxpd2z"; depends=[crayon digest evaluate IRdisplay jsonlite pbdZMQ repr uuid]; }; ISAT = derive2 { name="ISAT"; version="1.0.5"; sha256="0xlq568spfz527jxbqamrn1j87hnasg0kp2bcyjycaghmhsc6zmg"; depends=[gtools stringr]; }; ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; }; ISCO08ConveRsions = derive2 { name="ISCO08ConveRsions"; version="0.1.0"; sha256="0jqg03rxr3k01y29b7gq89jk2jd2qrshmq3338j8w6531r7y12lg"; depends=[]; }; ISEtools = derive2 { name="ISEtools"; version="3.1.1.1"; sha256="00d6znqz2mfmyi9ijgrg2pwl4lnvvsy00ysa7a7vjq7ip8qvcjfq"; depends=[coda Xmisc]; }; - ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; }; + ISLR = derive2 { name="ISLR"; version="1.4"; sha256="1hr0r00m9y39gzb4q7nip07mhxmaly12zwmwkisyx641h0vcclbi"; depends=[]; }; + ISLR2 = derive2 { name="ISLR2"; version="1.2"; sha256="0fqi6dca0iqx95fnjmgd5q4xklakdnwncdglj09h6w0nq6j3hvm0"; depends=[]; }; ISM = derive2 { name="ISM"; version="0.1.0"; sha256="0by0w6zgnwcwzbmxx16s8mb1avhc6aiavqp0qkxx6hr70vrgb997"; depends=[rJava xlsx xlsxjars]; }; ISOcodes = derive2 { name="ISOcodes"; version="2021.02.24"; sha256="19irnn2yi1bzhf03g666la84kj8040f5913kfrmd16dfnjy6j9qm"; depends=[]; }; ISOpureR = derive2 { name="ISOpureR"; version="1.1.3"; sha256="1ydhsh3v6n7prrg0dm7hsg8wx1244g791xnz1sjyhljhm31hgwc0"; depends=[futile_logger Rcpp RcppEigen]; }; ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; - ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; + ISR = derive2 { name="ISR"; version="2021.9.24"; sha256="0y1hggkb3d2nvnadr9qg83lsrzzwdnzywpqjkjf460lrmazki5dq"; depends=[MASS]; }; ISRaD = derive2 { name="ISRaD"; version="1.7.8"; sha256="119vvxviimnvy6x63hijsgmj8w02ni1g30imv8v39rp17hklr6pc"; depends=[dplyr ggplot2 httr maps raster RCurl readxl tidyr writexl]; }; ISwR = derive2 { name="ISwR"; version="2.0-8"; sha256="1bay7na68awq68bw82dwhcfxp2d3di2dg33islq0mgrhd4sfdfza"; depends=[]; }; - ITGM = derive2 { name="ITGM"; version="0.42"; sha256="1xyrr37h7kz4kkwvzbi9jaicai45wpjg0ygal5hqzpscij09pkhr"; depends=[data_table Fgmutils ggplot2 gsubfn plyr randomcoloR rbokeh sqldf]; }; ITNr = derive2 { name="ITNr"; version="0.6.0"; sha256="0yxn3768819ph49bizprj3arrvz9rzhb45rkcpfivwfwlyf010yy"; depends=[blockmodeling circlize cowplot dplyr fastmatch GGally ggplot2 igraph intergraph maps network networkDynamic plyr RColorBrewer reshape2 sna tnet WDI]; }; ITRLearn = derive2 { name="ITRLearn"; version="1.0-1"; sha256="03xdbpn3qddcq9krdpnywd3xbzfh2viym2qqx6rcqs7w7bdhhlk6"; depends=[Formula kernlab]; }; ITRSelect = derive2 { name="ITRSelect"; version="1.0-1"; sha256="0llr4hrlbnb728j5rw7vd3r9qlqf571hrldnm72kicis5di2v5di"; depends=[Formula Matrix ncvreg Rglpk svMisc]; }; @@ -2176,15 +2252,15 @@ in with self; { ImpactEffectsize = derive2 { name="ImpactEffectsize"; version="0.6.1"; sha256="12pl4kif6s8jllncm3r5133vrknq98h8awbskq4sh55p1ldaldfq"; depends=[caTools matrixStats parallelDist Rcpp]; }; ImportExport = derive2 { name="ImportExport"; version="1.3"; sha256="07i7p9xha1f23r07lw87ak13hd4wavdvwh8vb8sg2gyvnpa5njwp"; depends=[chron gdata haven Hmisc readxl RODBC writexl]; }; ImputeRobust = derive2 { name="ImputeRobust"; version="1.3-1"; sha256="1zvwlpffpm4gqysz57clf8jkqr72yjbzx90pdy95la51m0b6cdbd"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; - InDisc = derive2 { name="InDisc"; version="1.0.3"; sha256="05xcf7gqq9ik8azmyas7ggzg54rlwrrcglzsn0znjd5h2vjp310a"; depends=[matrixStats optimbase psych]; }; + InDisc = derive2 { name="InDisc"; version="1.1.0"; sha256="0halx4m503b9d4vk5y0qmx6qyvc6lwjr4ys4xdcj6bnzv8wi8ymw"; depends=[matrixStats psych]; }; InPosition = derive2 { name="InPosition"; version="0.12.7.1"; sha256="0d9c7dwaa1v0j8p5ff9223fc2gkbmbvyqylma2d8l4x5m92jmkv0"; depends=[ExPosition prettyGraphs]; }; - InSilicoVA = derive2 { name="InSilicoVA"; version="1.3.0"; sha256="0yaqn9hy6cq2n6cylbgycyg1f9l4d0hm00il6g275zflijjzirq7"; depends=[coda ggplot2 InterVA5 rJava]; }; - IncDTW = derive2 { name="IncDTW"; version="1.1.4.2"; sha256="0am4sm244aaqy2jc9fllyxgj2ww6jabfm8n72rg26wyh7zcbr7vj"; depends=[data_table ggplot2 Rcpp RcppArmadillo RcppParallel scales]; }; + InSilicoVA = derive2 { name="InSilicoVA"; version="1.3.4"; sha256="1hdvqa4inl5l6rzy2d9z5xvrnsj1jn75pdw77kr7cbnhjvjpi79f"; depends=[coda ggplot2 InterVA5 rJava]; }; + IncDTW = derive2 { name="IncDTW"; version="1.1.4.3"; sha256="1zqdb0fqy5bidydgfdrvf8hsza2lzd3db0pf7i1x654gk3g0fwf2"; depends=[data_table ggplot2 Rcpp RcppArmadillo RcppParallel scales]; }; IncomPair = derive2 { name="IncomPair"; version="0.1.0"; sha256="156mc4csbxz976md7ikjd6sqamzsfc8ik9xf1qbhrfl8y7957kbb"; depends=[]; }; IndTestPP = derive2 { name="IndTestPP"; version="3.0"; sha256="1z48pr8znbk1gdvjfdvszxlzhj7v88p3y7zhi1f0xw75dkfpnwwy"; depends=[]; }; IndepTest = derive2 { name="IndepTest"; version="0.2.0"; sha256="017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p"; depends=[FNN mvtnorm Rdpack]; }; IndexConstruction = derive2 { name="IndexConstruction"; version="0.1-3"; sha256="08bi3x7a9plxshgj6hq58mzkf1117a7p0fd1akqjh7k8mgywifwf"; depends=[fGarch KernSmooth lubridate RcppBDT xts zoo]; }; - IndexNumR = derive2 { name="IndexNumR"; version="0.2.0"; sha256="0pnf4whq69q59ay96x6xnqvs1vciqsqhjr93n3kiah7zikr7jj7j"; depends=[]; }; + IndexNumR = derive2 { name="IndexNumR"; version="0.3.0"; sha256="00m01lpc4zsbb4w1rgfdwmk0fx9dsjm3dfiki6r51hfpc9qh8zyv"; depends=[]; }; IndexNumber = derive2 { name="IndexNumber"; version="1.3.2"; sha256="0ff6fnkgbfwn3sasglr1aygvm9bawrvcj432xgka1vk28qnns0if"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; InfDim = derive2 { name="InfDim"; version="1.0"; sha256="0rh3ch0m015xjkxy08vf9pc6q7azjc6sgicd2j6cwh611pqq39wq"; depends=[]; }; @@ -2199,7 +2275,7 @@ in with self; { Infusion = derive2 { name="Infusion"; version="1.5.1"; sha256="02rlzil1qzgyxrf87mdvxdm0mgjnljk211j9c7hh72h0mq5rlg0d"; depends=[blackbox foreach mvtnorm numDeriv pbapply proxy spaMM viridis]; }; InjurySeverityScore = derive2 { name="InjurySeverityScore"; version="0.0.0.2"; sha256="0g52cksa774in18ykrym61l3my9zm343bgsq5mg7mki9x65xd35z"; depends=[dplyr rlang tidyr]; }; InspectChangepoint = derive2 { name="InspectChangepoint"; version="1.1"; sha256="0zrfyzz3l9jff7044dhrjv8rp8f258fz993ycyxyd29nd7x9n9nj"; depends=[MASS]; }; - IntCal = derive2 { name="IntCal"; version="0.1.3"; sha256="1drr1wly23sddn4kfqjx1iijpp21zgw1342d354s6id2l3r4cf11"; depends=[]; }; + IntCal = derive2 { name="IntCal"; version="0.2.2"; sha256="0y5s1jfd9wqrmf2i47vk1ij02d2v8gqfchmf4iwailxfdgl1qawf"; depends=[]; }; IntLik = derive2 { name="IntLik"; version="1.0"; sha256="13ww5bsbf1vnpaip0w53rw99a8hxzziibj7j66cm31jmi8l6fznf"; depends=[maxLik]; }; IntNMF = derive2 { name="IntNMF"; version="1.2.0"; sha256="09qzyvv7d4wr68qrlhcd4ivr65is3mypv1vaxpswwcjmcmyr4gzp"; depends=[cluster InterSIM MASS mclust NMF]; }; IntegrateBs = derive2 { name="IntegrateBs"; version="0.1.0"; sha256="1pkx4wpahd1sabzx55law3710x3vbh9yi6kii8gs2xfq3cb1llmq"; depends=[]; }; @@ -2207,7 +2283,7 @@ in with self; { IntegratedMRF = derive2 { name="IntegratedMRF"; version="1.1.9"; sha256="0kklgc48cib4bjfs9qbw13nkp8xyjdazrg6z15x69jylnxyakic7"; depends=[bootstrap ggplot2 limSolve MultivariateRandomForest Rcpp]; }; InterSIM = derive2 { name="InterSIM"; version="2.2.0"; sha256="14yccan88szf26w1hg1lkvmssids961gng7il3bjr2f1l0k8vd3b"; depends=[MASS NMF]; }; InterVA4 = derive2 { name="InterVA4"; version="1.7.6"; sha256="02fci1p8im8jpalv1mbrhrwhvpi23mzhwhpd1knpxyv7h6l9x0kg"; depends=[]; }; - InterVA5 = derive2 { name="InterVA5"; version="1.1.0"; sha256="058vncqp3z1bqr5bdx5rvv07si7pblyfw2n35022bq2k4rc63093"; depends=[curl readxl]; }; + InterVA5 = derive2 { name="InterVA5"; version="1.1.3"; sha256="08cnhbq1048z7qcvvj0d1br7d8jljzf48ci94aixs0y0vs8lgvvz"; depends=[curl readxl]; }; Interact = derive2 { name="Interact"; version="1.1"; sha256="1g9zhafdpr7j410bi8p03d8x9f8m3n329x8v01yk15f65fp7pl1d"; depends=[]; }; InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.3"; sha256="1pjyfg5p6081hng9h6wcmfnlfkcs300c3x9ksdj01587b97ph9s1"; depends=[MASS]; }; @@ -2221,6 +2297,7 @@ in with self; { Irescale = derive2 { name="Irescale"; version="2.3.0"; sha256="037bzli0zwlfbf5xmllqg2pi0shs33ggrnw69kzyw2sf780y3hs2"; depends=[e1071 fBasics ggplot2 imager Rdpack reshape2 sp]; }; IrishDirectorates = derive2 { name="IrishDirectorates"; version="1.4"; sha256="1mwjrmqga7f0p5w2m4f0i6mb68jimx6791pz03r8iqj3yx0vzkh0"; depends=[Rcpp RcppArmadillo]; }; IrregLong = derive2 { name="IrregLong"; version="0.3.3"; sha256="1qmpim7r5wzifr73bb261xhpsxz93n5h70yc883wiaikjg031abb"; depends=[data_table geepack survival]; }; + Iscores = derive2 { name="Iscores"; version="1.0.0"; sha256="0qsakxc1872l3cf2mvg5ybyqshbvp56pp962wn66hh9g323zf6l2"; depends=[ranger]; }; IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; }; IsingSampler = derive2 { name="IsingSampler"; version="0.2.1"; sha256="1cs4vk53b5fy6kywvycfjf62571yx92nvgp5i8hlvms1362ir7gv"; depends=[dplyr magrittr nnet plyr Rcpp]; }; Iso = derive2 { name="Iso"; version="0.0-18.1"; sha256="0vy6jdyvp751430sf2f690yhasjr70cpk3p3lnaaxjq3fs5gg99g"; depends=[]; }; @@ -2229,13 +2306,13 @@ in with self; { IsoCorr = derive2 { name="IsoCorr"; version="1.0"; sha256="0rhbclbpfd9d0dawbwwprlzx2j9k59gsmrb11yabiv5305b7vpx8"; depends=[]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="2.1.3"; sha256="0cy9y3lh20xxj9sah8s2zrwnbzk39s5xmscj4mskvn897bmlksh6"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="3.8"; sha256="1icibh8phazcj2q0s0kba4pk65nr609rpdpc3vcj31gi379jw5ks"; depends=[MASS]; }; - IsoplotRgui = derive2 { name="IsoplotRgui"; version="3.8"; sha256="1dfzc6m0fc81z7i1ificfibh76y675bdqj4v2zhnjqhzyiw2pib9"; depends=[httpuv IsoplotR jsonlite later]; }; + IsoplotR = derive2 { name="IsoplotR"; version="4.1"; sha256="03cvnlqfnj3pbx72m05szi8ldfbrzxlvwv975p3mgfwyain6l3vh"; depends=[MASS]; }; + IsoplotRgui = derive2 { name="IsoplotRgui"; version="4.1"; sha256="0fzrn8zxnvrx5zx68k4yv81x9aiqimd849ypg2ran6mpbjw1fkm2"; depends=[httpuv IsoplotR jsonlite later]; }; IsoriX = derive2 { name="IsoriX"; version="0.8.2"; sha256="1yk2xlz658c1kvm3kb89qmacy5g9qnzjawi2pk5xkn7g9v214adr"; depends=[lattice latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-3"; sha256="1fj2wawx5ac1fvlp28naqha0i17f1sb47j2qqzgccvx17ycqmmjn"; depends=[clue]; }; JASPAR = derive2 { name="JASPAR"; version="0.0.1"; sha256="0wiyn7cz45hwy9zkvacx28zdrg78q6715cg4r9xgcb39q25s0dcy"; depends=[gtools]; }; - JBrowseR = derive2 { name="JBrowseR"; version="0.7.1"; sha256="0ms7ydbbx95040n127smg7phqphw36sjh284py3ckk0k6fwlnzxg"; depends=[cli htmltools htmlwidgets httpuv jsonlite magrittr mime reactR readr stringr]; }; + JBrowseR = derive2 { name="JBrowseR"; version="0.8.1"; sha256="073vb53lcgsnx7bd6zapd5j3mf62cfic1952yypq53b28iaf1z6k"; depends=[cli dplyr htmltools htmlwidgets httpuv ids jsonlite magrittr mime reactR readr stringr]; }; JCRImpactFactor = derive2 { name="JCRImpactFactor"; version="1.0.0"; sha256="1i7853i8k03nq7ax9rypm9qcl5qgyddblgbfjp3yxi1s3a6bkwk1"; depends=[stringr]; }; JFE = derive2 { name="JFE"; version="2.5.1"; sha256="1393gdfm2kv0c0vadkzcj2kcxscrlgg02kihkhbsvnjzadhi1lb1"; depends=[caret fPortfolio magrittr tcltk2 xts zoo]; }; JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; @@ -2244,23 +2321,24 @@ in with self; { JM = derive2 { name="JM"; version="1.4-8"; sha256="1nq07hw30fqnag1h08b7crl2yfs85gyrn70aaw11bdbjv06r2x55"; depends=[MASS nlme survival]; }; JMI = derive2 { name="JMI"; version="0.1.0"; sha256="05phkwfb9v4g9jixlvbj6br7sbi64zvrgjwfr0v87ijddkxc9si9"; depends=[Rcpp RcppArmadillo]; }; JMbayes = derive2 { name="JMbayes"; version="0.8-85"; sha256="0s11jpzflc2zg60g4ffcw23c2f4zz3mzddrc2cl5y43xl2v304lb"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; - JMbayes2 = derive2 { name="JMbayes2"; version="0.1-5"; sha256="0szjzk7a5ncbgp2p6k3dc3sfsyrb7kanw8jawd0d0gdld9vbdm4i"; depends=[coda ggplot2 GLMMadaptive gridExtra matrixStats nlme Rcpp RcppArmadillo survival]; }; + JMbayes2 = derive2 { name="JMbayes2"; version="0.1-8"; sha256="16fy3j52xd3d1bjpzrs0qaajiw9fvpdvm19jx0nbwh16npid494f"; depends=[coda ggplot2 GLMMadaptive gridExtra matrixStats nlme Rcpp RcppArmadillo survival]; }; JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.10"; sha256="1hkylfrr2036vgkxfs98szm3883bmyvvyr0f3a8xygccf3pn28xc"; depends=[dplyr MASS pracma Rcpp reshape2 statmod]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; - JOPS = derive2 { name="JOPS"; version="0.1.13"; sha256="0cnlnkx9cnhvk9636y21nq6pm3yb0nhzgn6l3949a9nqlxishhzr"; depends=[boot colorspace fds fields ggplot2 MASS rpart SemiPar spam SpATS]; }; + JOPS = derive2 { name="JOPS"; version="0.1.15"; sha256="01yaw657826vfsfdscv3aqgswb5s2054s755agfxqm7g6sswpa13"; depends=[boot colorspace fds fields ggplot2 MASS rpart SemiPar spam SpATS]; }; JOUSBoost = derive2 { name="JOUSBoost"; version="2.1.0"; sha256="0f3rr7aw20nvmlpqrq3wzgmr55lqdqhk3wphpqq7msgvaf1zrcl7"; depends=[doParallel foreach Rcpp rpart]; }; JPEN = derive2 { name="JPEN"; version="1.0"; sha256="12rvp5bmlkwyr1gg336k655hp09gym0d2wwry70c1rz30x1sf2zs"; depends=[mvtnorm]; }; JQL = derive2 { name="JQL"; version="3.6.9"; sha256="0d926hngv4r6zl5f6yai3jwhl9hql2hv6ja3yjgplglkns66g4lh"; depends=[caret pdist randomForest]; }; JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="1.0.1"; sha256="0vcsay1jpjlfdwykad4hp319swr9lv1ajlcyhmiizwr1ph3f1az9"; depends=[nlme Rcpp RcppEigen statmod survival]; }; JSconsole = derive2 { name="JSconsole"; version="0.1.0"; sha256="1jpa48xb7hh4ap25sqrl67rzqra53qhcfwpfgs6hmpjnrld8n3ha"; depends=[rstudioapi V8]; }; - JSmediation = derive2 { name="JSmediation"; version="0.1.1"; sha256="06p413jfv02k88jdsbplnz696knxglgcqa4pjrgkhhic6awdh0jf"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; + JSmediation = derive2 { name="JSmediation"; version="0.2.0"; sha256="1js9qhjfycwwipaxf64zpgwbbqyccj9zv4kipd6r82l3rx9ck8mh"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; JWileymisc = derive2 { name="JWileymisc"; version="1.2.0"; sha256="0c140kcq0fw91r4g33xri8yxms0nk291zi708h00pszliwpg4qhq"; depends=[data_table emmeans extraoperators ggplot2 ggpubr ggthemes lavaan lme4 MASS mgcv mice multcompView psych quantreg rms robustbase VGAM]; }; JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-4"; sha256="1jm63w2jn89pk725x3d9myq010mb0g5ir8vhv29mkiwgrqig6iw1"; depends=[Rcpp]; }; JamendoR = derive2 { name="JamendoR"; version="0.1.0"; sha256="1v5i4ggc4igp83pik32fqp07ff8iv7dp93b3qhxcsy1msa4l88lx"; depends=[dplyr httr jsonlite]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-4"; sha256="1q48iykjzy22avmx0yy03vv9c7h87qsphg5hsrzfmx5gvck61m06"; depends=[rJava]; }; Jaya = derive2 { name="Jaya"; version="0.1.9"; sha256="0b23l7xp4waxjy1vkk09xaali5axr5900v9hkki4f75wh4gb1l53"; depends=[GA]; }; Jdmbs = derive2 { name="Jdmbs"; version="1.4"; sha256="14wprvxjyx1da1642z11wkzjiyxd5rbpaw1mzq4x6aw53dvh1kgv"; depends=[ggplot2 igraph png]; }; + JirAgileR = derive2 { name="JirAgileR"; version="0.0.2.1"; sha256="0f208q0qxvqzgbwdbads9rfalancwk6xwvi5x3vsszpbd6gzas4y"; depends=[httr jsonlite magrittr]; }; Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoF = derive2 { name="JoF"; version="0.1.0"; sha256="1my6fc4awrc822ibsvx3hiz4l49vp8dx0j05v56r7d27xizy8j0j"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.3.0"; sha256="1vjxzbfs8a7kpmn2lb9dca67d4njmzjr3pl16s0r9ihmmxxwwili"; depends=[nlme]; }; @@ -2269,25 +2347,27 @@ in with self; { JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointNets = derive2 { name="JointNets"; version="2.0.1"; sha256="18n9dsy0w0nh7dznp6gw6g5fhhjhf5y589nb49hri0721kq1h3rb"; depends=[brainR igraph JGL lpSolve MASS misc3d oro_nifti pcaPP rgl shiny]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; - JuliaCall = derive2 { name="JuliaCall"; version="0.17.2"; sha256="1wvpsncyx2i7ar7ylnhlg46qddakplm3ckhqdwbg0hfkkif4fq0h"; depends=[knitr Rcpp]; }; - JuliaConnectoR = derive2 { name="JuliaConnectoR"; version="0.6.3"; sha256="0x9k96w9i09kvia5z5ma28dxdgbidakbh1x72zga5134shkb34hj"; depends=[]; }; + JuliaCall = derive2 { name="JuliaCall"; version="0.17.4"; sha256="0ys2sm8yf41zqkvwz9cavkqk8br338w93wq0h8lggfq4q0l85n21"; depends=[knitr Rcpp]; }; + JuliaConnectoR = derive2 { name="JuliaConnectoR"; version="1.0.0"; sha256="0jdflrbspvy1jx1b4gjj3d5f8lm80pf3lj76zgcqwb39m993ab7d"; depends=[]; }; JumpTest = derive2 { name="JumpTest"; version="1.1"; sha256="0y375m5477nq0ybnjmfnd8hi45d8jmdnprqvw5f70llpd7bcghh0"; depends=[MASS Rcpp RcppEigen]; }; JumpeR = derive2 { name="JumpeR"; version="0.1.4"; sha256="1c1i1m46ccjph4hnlr66pdch7ld4k5fv95fcgk8amlig8hcqiq7c"; depends=[dplyr magrittr pdftools purrr rvest stringr SwimmeR xml2]; }; + JustifyAlpha = derive2 { name="JustifyAlpha"; version="0.1.1"; sha256="0bd7sn4sn95kal5q2x1q78fsk1mhakr5fax3z6ny2yda2h266af9"; depends=[BayesFactor ggplot2 pwr qpdf shiny shinydashboard stringr Superpower]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; KCSKNNShiny = derive2 { name="KCSKNNShiny"; version="0.1.0"; sha256="13gzqf3g7vj8cc0xm5902q7lad2way8d0ri1fs01dnv97wmwbxvn"; depends=[caret dplyr FNN rhandsontable shiny]; }; KCSNBShiny = derive2 { name="KCSNBShiny"; version="0.1.0"; sha256="1lv5r9qyvr3dnvcs00jyam0whv64qmv5vphhijlar1xa1g1llwqr"; depends=[caret dplyr e1071 rhandsontable shiny]; }; KENDL = derive2 { name="KENDL"; version="1.1"; sha256="05vsh3x0li964a485q3n19c7fahcprvg1bnrvffagkxf8w1iz153"; depends=[]; }; KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; }; - KFAS = derive2 { name="KFAS"; version="1.4.4"; sha256="1ivfss2wd3wxaryym64r5pv51bwhmv5342dsw65ykk3q9kdmpwvy"; depends=[]; }; + KFAS = derive2 { name="KFAS"; version="1.4.6"; sha256="1395xqm8rbg0i2vrd9n83fslf8v40csh0h17wczdnwnff3z3gpfy"; depends=[]; }; KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; }; KFPCA = derive2 { name="KFPCA"; version="1.0"; sha256="1v76rgmg2ww5784jpcd7mg68n1r0vczrisfw1c59cpnmgr365hsy"; depends=[fda fdapace kader pracma]; }; KGode = derive2 { name="KGode"; version="1.0.3"; sha256="0r5664vwq3nsjg08xxsx3lrvc4z2758fc013j8djwz5ydaas7xxs"; depends=[mvtnorm pracma pspline R6]; }; + KHQ = derive2 { name="KHQ"; version="0.2.0"; sha256="1vg0p3igbw81fbp2gli9msqbvymbn0qf3g3y0nb3q51d7wfax0qd"; depends=[magrittr openxlsx]; }; + KLexp = derive2 { name="KLexp"; version="1.0.0"; sha256="1knnqzzywh6zcj60133a5bfzqqxmf86gn4m1kggm7gzv1k9mx90b"; depends=[glmnet]; }; KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; }; KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; KMunicate = derive2 { name="KMunicate"; version="0.2.1"; sha256="19bsnixy59jqpj414827l2r65jimf0swxg36bi90s3pr4mvf7snq"; depends=[checkmate cowplot ggplot2 pammtools survival tidyr]; }; KNNShiny = derive2 { name="KNNShiny"; version="0.1.0"; sha256="16zm8bhdivaap3mvhdx2qn1b1j2iqyarclb0y2qd1n4viwcfm9c1"; depends=[caret dplyr e1071 FNN psycho rhandsontable rmarkdown shiny]; }; KOBT = derive2 { name="KOBT"; version="0.1.0"; sha256="0dw6s68x95d4z5a6p8bs1368jcxv5jx0wd87js28i2qm3q57ss71"; depends=[glmnet knockoff MASS Rdpack spcov xgboost]; }; - KODAMA = derive2 { name="KODAMA"; version="1.6"; sha256="0yhck798l5mqlxgs0jnhmmhr88jw8vay84l0p3304v9s0pbl4kih"; depends=[Rcpp RcppArmadillo]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.2"; sha256="1vz0099gp1r10n7w4p480l8rswdw100sns196d9xin2ibmmd2fx9"; depends=[pheatmap]; }; KONPsurv = derive2 { name="KONPsurv"; version="1.0.3"; sha256="1qijx7b6idjy23kqb5l58l6nc6dh35vrkxv370qpj3y2gvvn9d6x"; depends=[Rcpp survival]; }; KPC = derive2 { name="KPC"; version="0.1.0"; sha256="1kgrkhhvjkhirp04fgf36x5v5f7ba2yczj11fdk3l12k5k0dx621"; depends=[data_table emstreeR gmp kernlab proxy RANN]; }; @@ -2310,7 +2390,7 @@ in with self; { KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.4"; sha256="0qqlmcd04m89pmhrbmxxx4lzzb6sksgrm0j8x7fs5r0sxdqy6rcp"; depends=[plotrix Rcpp rgl]; }; KernelICA = derive2 { name="KernelICA"; version="0.1.0"; sha256="1yq7w24qq23c81a9y0jn36iw7zjbxsj3b3p1rq6yl0lanzda9bsr"; depends=[ICtest inline JADE ManifoldOptim Rcpp RcppArmadillo RcppEigen]; }; KernelKnn = derive2 { name="KernelKnn"; version="1.1.2"; sha256="16gnfp117zl3npwgra09c15amclzbhdb6wbrlgard7ii3n7249c2"; depends=[Rcpp RcppArmadillo]; }; - Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.2"; sha256="1aq1yhbs07wl5rjz4v5b8k8brap4p25f76qwr5cif655fxdzxc20"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; + Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.8"; sha256="0abv5cq9vjdb8jy3niv6xj3gyz4i1l9h7227lrldq43w049i04jx"; depends=[fastmatch fitdistrplus GB2 ks magrittr MASS mvtnorm plyr sp sparr]; }; Keyboard = derive2 { name="Keyboard"; version="0.1.0"; sha256="12i9zfpbh2297j78yrz6nnbmj926n3xdkbzmy1p9z7g9bi4cqrp1"; depends=[Iso Rcpp]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; KneeArrower = derive2 { name="KneeArrower"; version="1.0.0"; sha256="1blmim4l7375psa9c3wbpksywj5nfbawly4001n6311wcv4dybl5"; depends=[signal]; }; @@ -2322,11 +2402,12 @@ in with self; { Kpart = derive2 { name="Kpart"; version="1.2.2"; sha256="02df0pr8a0gm8558gbw9svxf5sybmg27grymy71ar9hjnhw5xlf2"; depends=[leaps]; }; KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.1"; sha256="0yzilmiiyzd2x3v0cnjphf0wdwiblh37kgrvmfrdy49qly48pvi2"; depends=[dplyr ggplot2 magrittr tibble]; }; KrigInv = derive2 { name="KrigInv"; version="1.4.1"; sha256="0x12xff7lgr1v2243shfz9a8r02qs56p7i0b8j2s6bmrzj1abrwb"; depends=[anMC DiceKriging mvtnorm pbivnorm randtoolbox rgenoud]; }; + Kurt = derive2 { name="Kurt"; version="1.1"; sha256="0fmd3m6pgsyf614wf11yclxl9zsac5jrffci5c2514wvs1slqw1p"; depends=[expm labstatR matrixcalc polynom]; }; L0Learn = derive2 { name="L0Learn"; version="2.0.3"; sha256="1lfbggh2bal8a6krg262v2pd90cd49aaxmz7crcdws4mx82srzmk"; depends=[ggplot2 MASS Matrix Rcpp RcppArmadillo reshape2]; }; L1mstate = derive2 { name="L1mstate"; version="1.0"; sha256="04gw078zyzpmnrxibqz27gf4dgyhhcn6lg15w10c6la079vfixx2"; depends=[colorspace MASS Matrix mstate Rcpp RcppEigen]; }; L1pack = derive2 { name="L1pack"; version="0.38.196"; sha256="1cayk11wp6f2vpyz14j7my8wpd8hny2mxpjsdsw4wlz0mmwml70l"; depends=[fastmatrix]; }; L2DensityGoFtest = derive2 { name="L2DensityGoFtest"; version="0.1.0"; sha256="0yhcj58inmj3qafvvpghs1qi8h5f14jki4qxy28jc7g8ciqxcw60"; depends=[fGarch kedd nor1mix]; }; - LA = derive2 { name="LA"; version="0.1.1"; sha256="0qn0654nyd8i9rgcsiy79q91jc6f6bwpzxw51c024ppczsv2j9wv"; depends=[LHD]; }; + LA = derive2 { name="LA"; version="0.1.2"; sha256="14fl7hj7az6p4h36gmxq068srj8aw46mdld8idy7yzplgxrzn4kw"; depends=[LHD]; }; LAGOSNE = derive2 { name="LAGOSNE"; version="2.0.2"; sha256="0fhy590mnkypknxk34c7vrhwrgsjrkf1f0yvfbjy1kvzvla0hjkl"; depends=[curl dplyr lazyeval magrittr memoise progress purrr qs rappdirs rlang sf stringr tibble tidyr]; }; LAM = derive2 { name="LAM"; version="0.5-15"; sha256="18p8w2n2k4788vpxhdxnmcafwj7a5bvihk530fiynkra3xrn1cr4"; depends=[CDM Rcpp RcppArmadillo sirt]; }; LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; }; @@ -2337,6 +2418,7 @@ in with self; { LCA = derive2 { name="LCA"; version="0.1.1"; sha256="014kih33y8b9nls0pcigw68jbz7vgnq8w1xbwm2d37g1m5y6xlyw"; depends=[]; }; LCAextend = derive2 { name="LCAextend"; version="1.3"; sha256="1l75y3vkbsmsm3pjd5pwy0hlv6gz5ryxs4pkx9aiyhxz2y9wnhpb"; depends=[boot kinship2 mvtnorm rms]; }; LCAvarsel = derive2 { name="LCAvarsel"; version="1.1"; sha256="0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; }; + LCCR = derive2 { name="LCCR"; version="1.1"; sha256="065jwj9q2qmkb1kvimpz3mvlpqi1dd0g9ycjcndsnpbak4iyjs1r"; depends=[MASS]; }; LCF = derive2 { name="LCF"; version="1.7.0"; sha256="1n5gwnkj26b7w6bzapda049bd4aqb317cip05nf0vy04xjc8giyc"; depends=[quadprog]; }; LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; LCMCR = derive2 { name="LCMCR"; version="0.4.11"; sha256="11vcqjjlcps3nqfrmncfqdadhrwk7fvrnx6xqwnc6l12hr98hic0"; depends=[]; }; @@ -2355,18 +2437,20 @@ in with self; { LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; LEAPFrOG = derive2 { name="LEAPFrOG"; version="1.0.7"; sha256="0z9ahkk4qzc45h1r806frv9cd84vvshvn5mr84gx7qdxljfkfq6h"; depends=[alabama MASS]; }; LEGIT = derive2 { name="LEGIT"; version="1.3.1"; sha256="19wkqj7wj8lpni2i2bbfa8l77xb0wbb121fb82srsi6hn76i392g"; depends=[boot doSNOW foreach formula_tools glmnet Hmisc iterators pROC RColorBrewer snow]; }; + LFApp = derive2 { name="LFApp"; version="1.3"; sha256="0jyzn5k1h629ybx8f09vsnvdmc2qbigaqy6rrcica2sh5if2b4w4"; depends=[DT EBImage fs ggplot2 mgcv shiny shinyFiles shinyjs shinyMobile shinythemes]; }; LFDR_MLE = derive2 { name="LFDR.MLE"; version="1.0.1"; sha256="0ykcd24w71zxb53nch041g7xh83gmg1ia3sysdpn0yzkhm0w7cdl"; depends=[]; }; LFDR_MME = derive2 { name="LFDR.MME"; version="1.0"; sha256="1ln0s3ki37cz1a7r96xn0zqw42im7fcanmz2vjk5zycshb423y22"; depends=[]; }; LFDREmpiricalBayes = derive2 { name="LFDREmpiricalBayes"; version="1.0"; sha256="1imw3djmbpdyplv9dmdzzirp9imk88j0kcxcyfh8yr9ywgd77x6b"; depends=[matrixStats R6]; }; LGEWIS = derive2 { name="LGEWIS"; version="1.1"; sha256="1i52vp0ghjzmyh4r8h6jpyij7x4skw99xvw017b56m8fg64zy70r"; depends=[CompQuadForm geeM mvtnorm SKAT]; }; LGRF = derive2 { name="LGRF"; version="1.0"; sha256="1kdx6y55aa9n6v43zfz6jk8amvvxbx79sqm1jx4ihgkpgcdglan7"; depends=[CompQuadForm geepack SKAT]; }; - LHD = derive2 { name="LHD"; version="1.3.2"; sha256="11wxsfcgxb5jfxgpf4aw465rn35qq2wdjmh7pirxjc0z6fklrzyp"; depends=[numbers]; }; + LHD = derive2 { name="LHD"; version="1.3.3"; sha256="0wqjf0wl0l3kq7i030qjzdavsn75jmghjvzk76b9d22fhk356yh8"; depends=[numbers]; }; LICORS = derive2 { name="LICORS"; version="0.2.0"; sha256="0p9y21k1mj1v397jpb5g6jiw7rpzbyfwr4kv2rp3lyxyasy2ykf0"; depends=[fields FNN locfit Matrix mvtnorm RColorBrewer zoo]; }; LIHKGr = derive2 { name="LIHKGr"; version="0.1.0"; sha256="16yyalsdbaxncgfabsz2q2fixzmwyd62gvnvnxazf4vlypp6xlqz"; depends=[dplyr magrittr purrr R6 raster RSelenium rvest tibble xml2]; }; LIHNPSD = derive2 { name="LIHNPSD"; version="0.2.1"; sha256="08ils29vvaq6abkgxbh028vwjw6l6h10cirbnwr65s458zvh4xqv"; depends=[BB Bolstad2 moments optimx Rmpfr sn]; }; LIM = derive2 { name="LIM"; version="1.4.6"; sha256="03x1gnm06bw1wrzc01110bjzd2mvjdzbc2mbrazh22jrmb32w5d8"; depends=[diagram limSolve]; }; LINselect = derive2 { name="LINselect"; version="1.1.3"; sha256="1qxqwph5ja2kf1s4ggsv8w6hjgf9mr53a0gahhjix2v78309z42g"; depends=[elasticnet gtools MASS mvtnorm pls randomForest]; }; LIStest = derive2 { name="LIStest"; version="2.1"; sha256="1gk253v3f1jcr4z5ps8nrqf1n7isjhbynxsi9jq729w7h725806a"; depends=[]; }; + LKT = derive2 { name="LKT"; version="1.0"; sha256="1bpiszm88kx44mc8262x29idmmhhh7k39d213mi5vnap1744yb7i"; depends=[caret data_table glmnet glmnetUtils knitr LiblineaR lme4 Matrix pROC SparseM]; }; LLM = derive2 { name="LLM"; version="1.1.0"; sha256="0kxppzaim7cmjawg5rjih4dsz8adq0asairgq3vx5lyjppb2cybx"; depends=[partykit reghelper RWeka scales stringr survey]; }; LLSR = derive2 { name="LLSR"; version="0.0.3.1"; sha256="0nci8p3gw35a3ifwrq7r2jih718p2iwmmh3495qnh0fk304y7kbi"; depends=[crayon digest dplyr ggplot2 minpack_lm nleqslv openxlsx rootSolve svDialogs svglite]; }; LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="3.0"; sha256="0jg889qh5a9wdi01yiw6z7kivs9dzh5dcq39f4zifdpqzglhshzb"; depends=[fields LCFdata lme4 Matrix mgcv]; }; @@ -2381,18 +2465,19 @@ in with self; { LOST = derive2 { name="LOST"; version="2.0.2"; sha256="15ggmvjy2k4j692y9h3anfzmb0hgnx66cbr76grwvcfysdx87ick"; depends=[e1071 gdata geomorph MASS miscTools pcaMethods rgl shapes]; }; LPBkg = derive2 { name="LPBkg"; version="1.2"; sha256="1pgv6cb7m2j7qnrzybnv6x67a3ry8kpvisqj86rvxzclc9q56fdn"; depends=[Hmisc orthopolynom polynom]; }; LPCM = derive2 { name="LPCM"; version="0.46-7"; sha256="1gdinsfn7y3fmv2zr1y8cvy0qwc9zwzf0q1xsnpbmcwljgxb6zdh"; depends=[]; }; - LPDynR = derive2 { name="LPDynR"; version="1.0.1"; sha256="13llv7x6dsyqinjivp40928bnynj3hlldip0xsn37xvmd2li6fjc"; depends=[data_table dplyr magrittr raster rgdal virtualspecies]; }; + LPDynR = derive2 { name="LPDynR"; version="1.0.2"; sha256="0vlrx4dbv62b89xbmsp24iyn4wiq3695szbli18baf2qj2nbmnym"; depends=[data_table dplyr magrittr raster rgdal virtualspecies]; }; LPGraph = derive2 { name="LPGraph"; version="2.1"; sha256="1d2kslravi3v9kf6sdabwfpa9s9xxqj3s3d7f7qfcrpfydqixq1q"; depends=[car PMA]; }; LPKsample = derive2 { name="LPKsample"; version="2.1"; sha256="0ifhx8w9f6sacmnck2g7i7r742i8bwwzf0rgajw3klw2wni9ikqx"; depends=[apcluster igraph LPGraph mclust]; }; LPM = derive2 { name="LPM"; version="2.8"; sha256="0a4cf7chjyfwp1s8dfyfgbm2k6nybfmfh4bhz8b8pfj1an68bdr6"; depends=[fracdiff MASS powdist]; }; LPRelevance = derive2 { name="LPRelevance"; version="3.2"; sha256="1bbsva41r8wj0hxar334zvwng0zrs0djq6jn74b345ncwz7ssa3h"; depends=[BayesGOF Bolstad2 caret ggplot2 glmnet leaps locfdr MASS polynom reshape2]; }; - LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; + LPS = derive2 { name="LPS"; version="1.0.16"; sha256="192iz2gakrddqc4h1y4swj3m3dl03x9mvj3i1dl7jnj18dxik24n"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; LPTime = derive2 { name="LPTime"; version="1.0-2"; sha256="08lb6884kj9pg12mzx67fdnqb86x5s6yzb72hh3nrz50awj1f8nn"; depends=[orthopolynom]; }; LPWC = derive2 { name="LPWC"; version="1.0.0"; sha256="0jgz8rkhhsdiwz7jq568axcsfwlkzdpwssr76zx33r0gz6mf3lln"; depends=[nleqslv]; }; LPmerge = derive2 { name="LPmerge"; version="1.7"; sha256="1wf7hfj670pnzzxyqm3vwrbrvxdbyprh42s5vpv4y54a0w4nr83g"; depends=[Matrix Rglpk]; }; LPower = derive2 { name="LPower"; version="0.1.1"; sha256="00sabp2snfm0175c0cfyv83yd1zb3b8h2wrr7yxgkmr4i3py1fn7"; depends=[MASS nlme]; }; LPsmooth = derive2 { name="LPsmooth"; version="0.1.3"; sha256="0fvn6vwfl37xhzzj44vadk8fr3d85zv58jjg7qfdjqvyw8khd59p"; depends=[Hmisc LPBkg LPGraph nloptr orthopolynom polynom truncnorm]; }; + LREP = derive2 { name="LREP"; version="0.1.1"; sha256="1dh6f12zvm8ff7vkl118bygyly68rdw6bqf2isjd01ji7d4w70cj"; depends=[]; }; LRQMM = derive2 { name="LRQMM"; version="1.2.2"; sha256="1gly4s8pr8wzcv547h6m1qr74q5n45zn0dz0lmx4pfvfgv1kym47"; depends=[GeneticsPed kinship2 Matrix MCMCglmm quantreg R_matlab rsvd SparseM sparsesvd]; }; LRTH = derive2 { name="LRTH"; version="1.3"; sha256="08vakwb7ca7956gifynzijka441yyx0wd5bq5jfhz56lzcxgfb99"; depends=[]; }; LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; @@ -2402,15 +2487,16 @@ in with self; { LSAmitR = derive2 { name="LSAmitR"; version="1.0-2"; sha256="15qyij193scrvc1ghcssr6qdzxc4l4qh199s09bz5hvr62zwfdgb"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; LSD = derive2 { name="LSD"; version="4.1-0"; sha256="17pbdlcbhzf3v7l42mjikln1ga5xjp5r78gjg6a88iahk0lwwlvm"; depends=[]; }; - LSDinterface = derive2 { name="LSDinterface"; version="0.4.0"; sha256="0nj4m924cj7x2djalrfyrrmycq2ha6s52m34kjgs7fc9f548lhx0"; depends=[abind]; }; - LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.3.2"; sha256="1d7fmmkgppgpkxmkvdnm6r7ncb527hqq47aaa8ck2wsbby6ngygb"; depends=[abind car DiceKriging diptest kSamples lawstat LSDinterface randtoolbox rgenoud sensitivity tseries]; }; - LSMRealOptions = derive2 { name="LSMRealOptions"; version="0.2.0"; sha256="1fvfr1zi73qpgl6hm9mamf3vi99ch10qk6ymxyhi17cmq9lndx52"; depends=[lifecycle]; }; + LSDinterface = derive2 { name="LSDinterface"; version="1.1.0"; sha256="0mr4d7l7hvn4m2ny8zz6ffyxxmlgqjg5v7pc83q4gq1fzvxs2bhy"; depends=[abind boot]; }; + LSDsensitivity = derive2 { name="LSDsensitivity"; version="1.1.0"; sha256="0cr075s9iz5kpzwzap5s6bbnm5x5dc461779vj05qn4amrrsyi1v"; depends=[abind car DiceKriging diptest kSamples lawstat LSDinterface randtoolbox rgenoud sensitivity tseries]; }; + LSMRealOptions = derive2 { name="LSMRealOptions"; version="0.2.1"; sha256="0paa5yahpyr8jpgy8aqk2fcixdny6ip09vqm8varvpiqfxrjd6ww"; depends=[]; }; LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; }; LSPFP = derive2 { name="LSPFP"; version="1.0.3"; sha256="0wxqpwfyyhk9dig9ji5na7czk19jx14lr9iqb2rllggz4cji9y65"; depends=[bit64 data_table R_utils RCurl seqinr]; }; LSRS = derive2 { name="LSRS"; version="0.2.0"; sha256="0p70v5vbxi1rf055mqgsp8v0lxnaj53bmbghli1764yn3x1k3iw6"; depends=[]; }; - LST = derive2 { name="LST"; version="0.1.0"; sha256="0fbhfka97lr827a95aixv6vngxbqgv09ply187h212ap9f9w9r0q"; depends=[raster]; }; - LSTS = derive2 { name="LSTS"; version="2.0"; sha256="0qzxlanzzqsif0n6114aqc48jdpnir6v8zzdpf66xw5mkbzl93la"; depends=[ggplot2 patchwork Rdpack scales]; }; - LSX = derive2 { name="LSX"; version="0.9.9"; sha256="0wl4iyyaxi66prva51iryc9iczjlgl3bp4zwdl1nyg01kx7ccn5i"; depends=[digest ggplot2 ggrepel irlba locfit Matrix proxyC quanteda quanteda_textstats reshape2 rsparse RSpectra rsvd stringi]; }; + LST = derive2 { name="LST"; version="1.1.0"; sha256="0vmdd4mvpm1mkb2qffkjpzwsg7xiw8sr2q4a69694bsy59vk43cd"; depends=[raster]; }; + LSTS = derive2 { name="LSTS"; version="2.1"; sha256="0pxcw5awm6fr6v1n8gd7yap0y1mba9khwgq27qlv9h2kmrzbr3hp"; depends=[ggplot2 patchwork Rdpack scales]; }; + LSVAR = derive2 { name="LSVAR"; version="1.2"; sha256="0lhx9a5l3s2c5isd3fhvxxfdazdxddpkg07hk4rckvhmxln7j1dj"; depends=[igraph mvtnorm pracma]; }; + LSX = derive2 { name="LSX"; version="1.0.2"; sha256="16dmi4nl4mxx37bb0cp5bpx2817smhq4vxh3bsz4p3am1jfrhzak"; depends=[digest ggplot2 ggrepel irlba locfit Matrix proxyC quanteda quanteda_textstats reshape2 rsparse RSpectra rsvd stringi]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTRCforests = derive2 { name="LTRCforests"; version="0.5.5"; sha256="0f0am4wydk4wqiwjzxj2ibdkp5sd47qam4218nn0489knkvas3s7"; depends=[ipred partykit prodlim survival]; }; LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.1"; sha256="1k16m2fpwn8m4dvm1b82srf3bgkvkwf6kcjpwjgkdappifc7p5m8"; depends=[icenReg Icens interval inum partykit rpart survival]; }; @@ -2430,7 +2516,7 @@ in with self; { LambertW = derive2 { name="LambertW"; version="0.6.6"; sha256="02pi98nnscaz044jkh2nrxxdyafdbiy9x0szdfkx894s3bwrf29i"; depends=[ggplot2 lamW MASS RColorBrewer Rcpp reshape2]; }; Langevin = derive2 { name="Langevin"; version="1.2.1"; sha256="1bl7145585z173jv8y6f36ba29q1iq29anm44bdq9hcpql235ihy"; depends=[Rcpp RcppArmadillo]; }; LaplaceDeconv = derive2 { name="LaplaceDeconv"; version="1.0.4"; sha256="0n56cmrb536j1vmfizzag1x8wm68c2znpclwbdl8qraqzp8rmffx"; depends=[orthopolynom polynom]; }; - LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.4"; sha256="1nv1kx86cg8f2s8q15pzskc0lg94bb250p0fhybrx5sjqv1s2lj1"; depends=[]; }; + LaplacesDemon = derive2 { name="LaplacesDemon"; version="16.1.6"; sha256="1dsfp65cg06f25zjzd5ib4qyn1alfhbhpgyvpcw5n6bszn13idap"; depends=[]; }; LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.2"; sha256="1z1cnj6r6cq3b8xa9qck3ijfmzsr70r2p9m1ndakijb36pgwrzcs"; depends=[Matrix Rcpp]; }; LassoGEE = derive2 { name="LassoGEE"; version="1.0"; sha256="1zascnl9hihw0gx2ssmdiv8gcp2672kz9vmsp5vrc2wr9cdcdjz3"; depends=[caret MASS mvtnorm PGEE Rcpp RcppArmadillo SimCorMultRes]; }; LassoNet = derive2 { name="LassoNet"; version="0.8.3"; sha256="02m0g078wg9ka3ck92nrpqrm3msw1m7r8k43brcaiffqwhky99vy"; depends=[Rcpp]; }; @@ -2438,6 +2524,7 @@ in with self; { Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; }; LatticeDesign = derive2 { name="LatticeDesign"; version="2.0-4"; sha256="1spmm9gk09i5dkz6xh4qvmq9r7wd9r8a84xqh8d21678kvl2j3fc"; depends=[]; }; LatticeKrig = derive2 { name="LatticeKrig"; version="8.4"; sha256="153yaf0k4l5za8f13yh2mzjv66bnmi5kp6zaxq9vrisld4vdp58h"; depends=[fields spam]; }; + LavaCvxr = derive2 { name="LavaCvxr"; version="1.0.2"; sha256="0gg14y8kngj3r4p4bl3ddnm9dxlklxhvnra5bmbjp1kmjhlg52rn"; depends=[CVXR Lavash pracma]; }; Lavash = derive2 { name="Lavash"; version="1.0"; sha256="0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07"; depends=[glmnet MASS pracma]; }; LeArEst = derive2 { name="LeArEst"; version="1.0.0"; sha256="0kga9n0ia2zljyw4xa9n572zmxpwql8xd3ys4p9jp02h432pfkpp"; depends=[conicfit doParallel foreach jpeg opencpu]; }; LeMaRns = derive2 { name="LeMaRns"; version="0.1.2"; sha256="0k7mpl2dgy2qvs068mzgfagvlk116p80cxj4dfzjkrr8wzrmwyni"; depends=[abind Rcpp RcppArmadillo]; }; @@ -2447,14 +2534,14 @@ in with self; { LearnGeom = derive2 { name="LearnGeom"; version="1.5"; sha256="1pnxiwjkdj78p4hkl1lqagmd937q63yncb45fcra28sa9v9psrcs"; depends=[]; }; LearningRlab = derive2 { name="LearningRlab"; version="2.2"; sha256="15lkcrdfdrip1s4rpsn6kshjzsg1hfryh6lgbiqw9x2h0xvfj4da"; depends=[crayon magick]; }; LearningStats = derive2 { name="LearningStats"; version="0.1.0"; sha256="0xrrb6jws4zj2nwnn30g338bib49b7j26v52ym7p2variwllz068"; depends=[data_table haven readODS readxl]; }; + LexFindR = derive2 { name="LexFindR"; version="1.0.1"; sha256="0c2bw973wapbxm00094blvg3k778pikrqqn3ry2b09lq17bx8xgp"; depends=[]; }; LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.3.4"; sha256="08v160s9znvv808wcw7319p3dk189bmpypg2wkdzzgkdby4gj3fr"; depends=[data_table pbapply quanteda quanteda_textstats stringdist stringi tibble]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.4.0"; sha256="0vlm8wcaj3755cbxrfb7ybla9znd2cbklw2xwyyn6r9i4c9xsfih"; depends=[dplyr ggplot2 tidyr]; }; LibOPF = derive2 { name="LibOPF"; version="2.6.1"; sha256="01j3jzhi337dmblcm1d79i4cbp159z6k54ybpyzfasjfnp7qizz6"; depends=[]; }; LiblineaR = derive2 { name="LiblineaR"; version="2.10-12"; sha256="0r5xbklbfgflwlmkh4i0bsdyqcjs1b4lvxr20f4fhajmkj83gqrs"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; - Libra = derive2 { name="Libra"; version="1.6"; sha256="0fqmc6fhcmpg9ragk4r4k000wrix9dsd52baz58bp1c80wpvvcf3"; depends=[nnls]; }; LifeHist = derive2 { name="LifeHist"; version="1.0-1"; sha256="0q6l6rva5kxl8yzqa7ni4sdj6p4c61sdsjx8zhckzxb7xlwg2hh0"; depends=[BB Hmisc optimx]; }; - LifeInsuranceContracts = derive2 { name="LifeInsuranceContracts"; version="0.0.2"; sha256="13ml74q19z72ihy7w6vgfrp0wvy8sc2s0kpz4ys875aym6cwrfmf"; depends=[abind dplyr lubridate MortalityTables objectProperties openxlsx R6 rlang scales stringr]; }; + LifeInsuranceContracts = derive2 { name="LifeInsuranceContracts"; version="0.0.3"; sha256="0qdwz7fm5y3nvmqnw20jghzi0qm9bx52rnk4di74j60x2y13wf4m"; depends=[abind dplyr kableExtra lubridate MortalityTables objectProperties openxlsx pander R6 rlang scales stringr tidyr]; }; LifeTables = derive2 { name="LifeTables"; version="1.0"; sha256="1dyivvi5cjsnbhncj3arkrndadg7v81nzdf6p6mpgqwqvwn5li8x"; depends=[mclust]; }; LightningR = derive2 { name="LightningR"; version="1.0.2"; sha256="1va673aw2hgir8ybbjad6dhbs8izs1z4jcikwa7qp3mkv0zqd0vq"; depends=[httr R6 RCurl RJSONIO]; }; LilRhino = derive2 { name="LilRhino"; version="1.2.0"; sha256="1d1mg77k67b5ddlp41haygagash48b6jy30q20lb231lbiss9ncp"; depends=[beepr data_table dplyr e1071 fastmatch FNN ggplot2 keras neuralnet readr SnowballC stringi textclean tm]; }; @@ -2462,28 +2549,29 @@ in with self; { LinCal = derive2 { name="LinCal"; version="1.0"; sha256="1xr9jnna20hh78dh9wjg70jm8fhaxvdwql894kdp0y5h4pchkdph"; depends=[]; }; LinRegInteractive = derive2 { name="LinRegInteractive"; version="0.3-3"; sha256="1rkxvkv3ls0cgqcvs74dy6qabh62cjc0xh89dlk88bpc8mz76k8z"; depends=[rpanel xtable]; }; LindenmayeR = derive2 { name="LindenmayeR"; version="0.1.13"; sha256="01wnvmxdb91ai21h3plgsmy6ds7564s5wq2xyr905ma4a2d8afn5"; depends=[stringr]; }; - LindleyPowerSeries = derive2 { name="LindleyPowerSeries"; version="0.1.0"; sha256="1nylsmxx1s6g5dzz69kaqccx3c7hzb49jan22b94816pnzd0k7zp"; depends=[lamW]; }; + LindleyPowerSeries = derive2 { name="LindleyPowerSeries"; version="1.0.1"; sha256="1hzncfknnyr7z95yv6146j362fz2dlmgyv755ac29b098x5ix808"; depends=[lamW]; }; LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; LinearDetect = derive2 { name="LinearDetect"; version="0.1.5"; sha256="0i79k42avcv2nhk9p71a74zv8d204jgqzrs2mni6zp8brhwmxlki"; depends=[factoextra ggplot2 glmnet mvtnorm Rcpp RcppArmadillo sparsevar]; }; LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; }; LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; }; LinkedGASP = derive2 { name="LinkedGASP"; version="1.0"; sha256="1win1yd8y677rmic531dyd29f49p7pr1r3kbjysvv9syi5nkydyj"; depends=[nloptr spBayes]; }; LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.4.0"; sha256="0p6qjnrljxnj3c5nynmx563vcqhxj4jf7czqdg750h38gjy8qzxi"; depends=[crochet]; }; - LipidMS = derive2 { name="LipidMS"; version="2.1.3"; sha256="02dkdrm379v9181zw1rpv9jzgayb2kfzgp04yg86f8bjja1nyxff"; depends=[CHNOSZ readMzXmlData scales shiny shinythemes]; }; + LipidMS = derive2 { name="LipidMS"; version="3.0.1"; sha256="1cphi3qflalszyyi9sah05gbvapir44yg0iqhhrwx170khywmskl"; depends=[CHNOSZ doParallel foreach iterators readMzXmlData scales shiny shinythemes]; }; Lmoments = derive2 { name="Lmoments"; version="1.3-1"; sha256="0pc63bj9a8hzr5m3yssrc4kin39fffwkl8rggs3sagzr12d4i7bw"; depends=[Rcpp RcppArmadillo]; }; LncFinder = derive2 { name="LncFinder"; version="1.1.4"; sha256="04ndxl368glx63pq58mxpyiddj2p84kyi22ylfy1x1x24xmgbdnn"; depends=[caret e1071 seqinr]; }; LncPath = derive2 { name="LncPath"; version="1.1"; sha256="1cpsy681yq96867nr9g75xb0dilb016shqlhxpdn5xyiakrgjl4v"; depends=[igraph]; }; LocFDRPois = derive2 { name="LocFDRPois"; version="1.0.0"; sha256="0zzdp9wgwr6wn3grimghpj4vq34x37c8bqg8acfzlzih8frqal3r"; depends=[dplyr ggplot2]; }; LocalControl = derive2 { name="LocalControl"; version="1.1.2.2"; sha256="1lqcjy5fzz1ndqih5nikidy2zfkn2dn7smbyvdjy47pgcjbzm96a"; depends=[cluster gss lattice Rcpp]; }; LocalControlStrategy = derive2 { name="LocalControlStrategy"; version="1.3.3"; sha256="05vggk5d0w3f9w5217c9hzy5jhwv24p2g8pcj0l6zxkhic01nbrl"; depends=[cluster lattice]; }; - Lock5Data = derive2 { name="Lock5Data"; version="2.8"; sha256="17awskq78h23z2dy96d7hziljhnkx5phpd48q7cppxidyvzfywim"; depends=[]; }; + Lock5Data = derive2 { name="Lock5Data"; version="3.0.0"; sha256="1407vkcdphy5pb4sgy2ms36vjffiwg2l2753gbszm9wv2m0wrnv4"; depends=[]; }; Lock5withR = derive2 { name="Lock5withR"; version="1.2.2"; sha256="10x3i11pb4cig4pgfmw9984na5zjbg7d41y6crakiimf53ihx0c2"; depends=[]; }; LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.6-4"; sha256="0lfpsm9iqjl8hmagbd26ks7pwngn5z57s6iiy2l6n8xbnvaax2x8"; depends=[MASS mclust mvtnorm]; }; - LogicReg = derive2 { name="LogicReg"; version="1.6.2"; sha256="004dd3vrb0xbwfkij4ickhvsmhfmhd3r4qr6j9haihffnbm6xbjh"; depends=[survival]; }; + LogRegEquiv = derive2 { name="LogRegEquiv"; version="0.1.2"; sha256="158glnha6vl8kc2g6rg8m8xi400pyqgrh2scmb3bsxbbbqd5z1p8"; depends=[]; }; + LogicReg = derive2 { name="LogicReg"; version="1.6.4"; sha256="0517rp55c1h8hwrz3dmnkdc6wzs6ialzdpw50icadcg9q8d0h9i0"; depends=[survival]; }; LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; LogitNet = derive2 { name="LogitNet"; version="0.1-1"; sha256="08xi5rpbqkc1b3qj24blv3l0r68wcqbsbjcqxiypm75f3c2irc4i"; depends=[]; }; LogrankA = derive2 { name="LogrankA"; version="1.0"; sha256="005zkpzi8h03qvqlpkygrf9xv4q77klafkfxw47x04jvkhklwigb"; depends=[]; }; - LongCART = derive2 { name="LongCART"; version="3.0"; sha256="1dzd29148h5l17jgcgf1wsf2sdq0sxac6aykriwx9sdfykyb81fr"; depends=[Formula magic nlme rpart survival survminer]; }; + LongCART = derive2 { name="LongCART"; version="3.1"; sha256="0f6kzlswxb1jb8hg4c3966ihwcqbkd5mkfqjjkzviq8idpyhsk4x"; depends=[Formula magic nlme rpart survival survminer]; }; LongMemoryTS = derive2 { name="LongMemoryTS"; version="0.1.0"; sha256="0n378sad8i283vs7q63spdhwpwjly2d5zj15d4v2085j7sc7z8vi"; depends=[fracdiff longmemo mvtnorm partitions Rcpp RcppArmadillo]; }; LongituRF = derive2 { name="LongituRF"; version="0.9"; sha256="0h70g0qhv0rgz40i58ykrcak1wibbvya7fql0v79xkd21217y1av"; depends=[latex2exp mvtnorm randomForest rpart]; }; LoopAnalyst = derive2 { name="LoopAnalyst"; version="1.2-6"; sha256="1gy9v6qiwkwbwp4snif2imf6zn50ffjrig54ln57c5v5pk3phnvv"; depends=[nlme]; }; @@ -2493,22 +2581,24 @@ in with self; { LowRankQP = derive2 { name="LowRankQP"; version="1.0.4"; sha256="0cg8f42s15vphnifw6gnrhxaj6j5hmgbq8xki5mkwjsizd0ch5na"; depends=[]; }; LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; - Luminescence = derive2 { name="Luminescence"; version="0.9.11"; sha256="1kayb6apvk6jc8sfpmpp3d3alr490304g21yhknyczlr12c0xaff"; depends=[bbmle data_table DEoptim httr lamW magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; + Luminescence = derive2 { name="Luminescence"; version="0.9.15"; sha256="0mjzrq5qpkyswvgjf3bw24vjhqw94d06blc3c1fhr8pq8vglms6q"; depends=[bbmle data_table DEoptim httr lamW matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M2SMF = derive2 { name="M2SMF"; version="2.0"; sha256="160qjrb3mxybvr4z6zra6rzf6scyrb9mplw36gqlfxj418ndnmm1"; depends=[dplyr MASS]; }; M2SMJF = derive2 { name="M2SMJF"; version="1.0"; sha256="0v4sg5h3h2pjp996jspv206c8cymjpn1fg38ivaw12s7bmx8j409"; depends=[dplyr MASS]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; + MAAPER = derive2 { name="MAAPER"; version="1.1.1"; sha256="05jjfnp1hwg8pk06np6fbdfxi6zn60wzhrkzlh8jkqgwxjhgnvai"; depends=[GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges MASS Rsamtools]; }; MABOUST = derive2 { name="MABOUST"; version="1.0.1"; sha256="044k29nibl5zc32zz2696kbhrz5dafgaikgmjqznsq25p48si453"; depends=[Rcpp RcppArmadillo]; }; + MACER = derive2 { name="MACER"; version="0.1.1"; sha256="006f15s75hnyacc31ni4gf1r4j32hlv5bqmnnl9fkcgf9jxs9hw4"; depends=[ape httr rentrez]; }; MADPop = derive2 { name="MADPop"; version="1.1.2"; sha256="0hwnkjrc3w9x3gha0y70fidfc587b6gfdhzwzdzrfvxrhsdy05yd"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; MAFDash = derive2 { name="MAFDash"; version="0.1.0"; sha256="0xk9zbdwmm597jck8v3w76d2s72k6amv8ya94y7jbnik60ndwnda"; depends=[bsplus canvasXpress circlize ComplexHeatmap crosstalk data_table dplyr DT ensurer flexdashboard GenomicRanges ggbeeswarm ggplot2 htmltools IRanges knitr maftools pheatmap plotly RColorBrewer reshape2 rmarkdown TCGAbiolinks]; }; + MAGEE = derive2 { name="MAGEE"; version="1.0.0"; sha256="1zrvkbqv1pzcm78xn7wdqw480iwd2vb2kidh2siqny2ahfab6440"; depends=[CompQuadForm foreach GMMAT MASS Matrix Rcpp RcppArmadillo SeqArray SeqVarTools]; }; MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.4"; sha256="1asr18byrgy6bkpxpmnkczgr3dam6ymf30lw6izq112krc891bg4"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; - MAINT_Data = derive2 { name="MAINT.Data"; version="2.6.1"; sha256="1ylxyvbi42lp1kv4kg28drw523ld8i2psrzhaq81i30h62349ncg"; depends=[GGally ggplot2 MASS mclust miscTools pcaPP Rcpp RcppArmadillo robustbase rrcov sn withr]; }; - MALDIquant = derive2 { name="MALDIquant"; version="1.19.3"; sha256="0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"; depends=[]; }; + MAINT_Data = derive2 { name="MAINT.Data"; version="2.6.2"; sha256="0c2llzjhrv1jn5zna654bjgyq5q0hqwzfv9kda9mfjf20pfc34my"; depends=[GGally ggplot2 MASS mclust miscTools pcaPP Rcpp RcppArmadillo robustbase rrcov sn withr]; }; + MALDIquant = derive2 { name="MALDIquant"; version="1.20"; sha256="1h9i158czlzwbn5zakkqd2ggc9g90r73vdspmp6kgfcmy9frvwzz"; depends=[]; }; MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.12"; sha256="1r37x1hnhq246dazc76d17jfjc57khxayswbzvc4md39z8dnbihx"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; MALDIrppa = derive2 { name="MALDIrppa"; version="1.0.5"; sha256="02wm9i4lhrhxxmhh0a7d1x0np290fbvwr3rb4scp66ix0s1as4fk"; depends=[lattice MALDIquant robustbase signal]; }; - MAMS = derive2 { name="MAMS"; version="1.4.1"; sha256="1zc0lnbq4fvsrlyh3a9i010h6gms4872nxv534j5xglq2x2pm7rh"; depends=[mvtnorm]; }; - MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; }; + MAMS = derive2 { name="MAMS"; version="1.4.2"; sha256="026np007p4n70dgwgr4ighkcdbyhsisfczxba90vm8hggh5qr2v1"; depends=[mvtnorm]; }; MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; }; - MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.4.3"; sha256="03s96l9fpl7a6hx537cflsjv990qsy3bcy53n3hzvy4llr8qvvmk"; depends=[data_table ellipse magic MASS Matrix multcomp plotrix plyr]; }; + MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.5.2"; sha256="02wf071xl3bk5550qwzk8bpv8zaphrpdx52xkhw36np6j5qgp779"; depends=[data_table ellipse magic MASS Matrix multcomp plotrix plyr]; }; MAP = derive2 { name="MAP"; version="0.1.3"; sha256="19d0m30jh50ibbdgvcvq1vsz5i1vf8qvl0d0nbqklvnndch61jhk"; depends=[flexmix Matrix]; }; MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPITR = derive2 { name="MAPITR"; version="1.1.2"; sha256="0vmsdspja4qfs2z14p835g78zggk8h54v25cn268z1hg2p6zxish"; depends=[CompQuadForm doParallel Rcpp RcppArmadillo]; }; @@ -2516,7 +2606,6 @@ in with self; { MARSANNhybrid = derive2 { name="MARSANNhybrid"; version="0.1.0"; sha256="1xs0gjdjl9c5i1i8ds9s3sq0764267h6gngkbwimfa8miq287idm"; depends=[earth neuralnet]; }; MARSS = derive2 { name="MARSS"; version="3.11.3"; sha256="03lk838wd88xh4x8ch77z098syn1373nzljckr6pp1jyhxxkvx5z"; depends=[KFAS mvtnorm nlme]; }; MARSSVRhybrid = derive2 { name="MARSSVRhybrid"; version="0.1.0"; sha256="10b8d75q5hiqf8id1qsvjx379xyx4vphq5r1iwvykjaw4zxbyx65"; depends=[e1071 earth]; }; - MARVEL = derive2 { name="MARVEL"; version="1.1.0"; sha256="0ncyjravigqa97l05z8cqgap67l6rh4n2rh13hnyqvjbd1bmqx1c"; depends=[AnnotationDbi dplyr factoextra FactoMineR fitdistrplus ggplot2 GO_db GOstats kableExtra org_Hs_eg_db plyr stringr]; }; MARX = derive2 { name="MARX"; version="0.2"; sha256="1rc87hz719khl8mclbkfdix499nsc4nyihaaavd73nany7iprm02"; depends=[fBasics matlab metRology stabledist tseries]; }; MASS = derive2 { name="MASS"; version="7.3-54"; sha256="08g8ashbcas3ac98kxvchbwc8da9dq9anpngb4arnw62npawq05q"; depends=[]; }; MASSExtra = derive2 { name="MASSExtra"; version="1.1.2"; sha256="0jzzm3ahn1iisdp632hcn8lnk6hhh699jqfj6v0164qxd6487xvs"; depends=[demoKde MASS]; }; @@ -2525,30 +2614,33 @@ in with self; { MATA = derive2 { name="MATA"; version="0.7.1"; sha256="0qydfp856qlmiwf3a2vs2dfk203sx8vvzrqn4hga9wi7bxdylk9f"; depends=[]; }; MATTOOLS = derive2 { name="MATTOOLS"; version="1.1"; sha256="1nzrkm3a08rpsd9vplyf33rrkadlrd0ln70k95qxj98ndh2v97px"; depends=[]; }; MAVE = derive2 { name="MAVE"; version="1.3.11"; sha256="01n204bxabbm8pcpayy2s0jvhg73r5cv0026lb3vbk0m40z02kcz"; depends=[mda Rcpp RcppArmadillo]; }; - MAVIS = derive2 { name="MAVIS"; version="1.1.3"; sha256="02hi3n2rligmgg9afqwkpdny2kl68simkaqdd6k1swzlrih0fs4s"; depends=[compute_es ggplot2 irr MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS weightr]; }; MAVTgsa = derive2 { name="MAVTgsa"; version="1.3"; sha256="0rzal9nsi8y873cbf6hrdyzyxnpd4r1yr9fj66cn0s1c8g93ls0y"; depends=[corpcor foreach MASS multcomp randomForest]; }; MAc = derive2 { name="MAc"; version="1.1.1"; sha256="1dawqmziffaz8wgcqzwc0yifdq65abgn24vafkrwa9850048c26f"; depends=[]; }; MAclinical = derive2 { name="MAclinical"; version="1.0-5"; sha256="1g0ka1kqww2xim8rp5rznkzn0a541zvf841s3lbphfh9k3y3ixs3"; depends=[e1071 party plsgenomics st]; }; MAd = derive2 { name="MAd"; version="0.8-2.1"; sha256="096vdhfsp7bd3zvv6ydai6p230r16jx8zlqc4hlhnzma8rqypm35"; depends=[]; }; + MAnorm2 = derive2 { name="MAnorm2"; version="1.2.0"; sha256="0g2njf2jfra1yd8i6bxivpp4jhqxkwn1hlhfg7n3ggzixmnbgai6"; depends=[locfit scales statmod]; }; MBA = derive2 { name="MBA"; version="0.0-9"; sha256="06kmrdkhwwvr3kd5w8ws6r528hhpvbhixyj98lv36kkwlx14x06g"; depends=[BH]; }; + MBAnalysis = derive2 { name="MBAnalysis"; version="0.1.0"; sha256="1hgx6lgyjbiq6y5cw720mnavll6mfrarwvhsm7pbr25q1d37jmg8"; depends=[ggplot2 ggrepel]; }; MBC = derive2 { name="MBC"; version="0.10-5"; sha256="0iks5nhk4im7l1dxgwcwi4mlnh271zfq9mrlaklpk38zakzyf2n4"; depends=[energy FNN Matrix]; }; MBCbook = derive2 { name="MBCbook"; version="0.1.1"; sha256="0jmvgyzrahnxfkwdn86k3ffk0zfbbd34ya4zmlnsmp2m9xds7lgn"; depends=[MASS mclust mvtnorm Rmixmod]; }; MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; }; MBESS = derive2 { name="MBESS"; version="4.8.0"; sha256="14zji1iy7ai3hdxz5jpqbac8q9rp96700bimx24if2s9k6f208x9"; depends=[boot gsl lavaan MASS mnormt nlme OpenMx sem semTools]; }; - MBHdesign = derive2 { name="MBHdesign"; version="2.1.8"; sha256="0b9bk4qwsymhqylpimsv1vghlwwbnd1jxik927wn2h4ijqq3a9q8"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; + MBHdesign = derive2 { name="MBHdesign"; version="2.1.9"; sha256="1bv5h59q83jkfb3h7siwj9h2cwc1qmwld48xy8bfipznycfi77al"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; MBNMAdose = derive2 { name="MBNMAdose"; version="0.3.0"; sha256="12ij19828nd1r0x1vp7clkwr0zfksk3f755xghzylz0ryjjb716d"; depends=[checkmate dplyr formatR igraph magrittr R2jags Rdpack reshape2 rgeos rjags scales utf8]; }; - MBNMAtime = derive2 { name="MBNMAtime"; version="0.2.0"; sha256="0fykvfhql8ar96qpzbfiznqbkz8kcgmjhsvg0fzpy4ycx5359m66"; depends=[checkmate dplyr knitr magrittr R2jags Rdpack reshape2 rjags]; }; + MBNMAtime = derive2 { name="MBNMAtime"; version="0.2.1"; sha256="1qm8g9hljl3qsnh434dzg2y0iyq635ym1ygfzr0q8l6h76qr7p1j"; depends=[checkmate dplyr knitr magrittr R2jags Rdpack reshape2 rjags]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; - MBmca = derive2 { name="MBmca"; version="1.0.1-1"; sha256="01gxb6c50bmxgbqld1mpy8l0h58gahmzfcir1ihgbpnvq6ysx8k7"; depends=[chipPCR robustbase]; }; + MBmca = derive2 { name="MBmca"; version="1.0.1-3"; sha256="08ls1rc440jjmbwm6nx09xyr8nb8q6wwid0dyvb97fv4l85qwn19"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; - MCAvariants = derive2 { name="MCAvariants"; version="2.5"; sha256="17v554ammsk39i3h8i85m2jl0wf4ra1ag3n9x3mcpqakha0p7852"; depends=[ggplot2 ggrepel gridExtra plotly]; }; + MCAvariants = derive2 { name="MCAvariants"; version="2.6"; sha256="19wnkk7bknj5yd0s63ssybyzbs7x022wyr444hlinw8b181x57f3"; depends=[ggplot2 ggrepel gridExtra plotly]; }; MCBackscattering = derive2 { name="MCBackscattering"; version="0.1.1"; sha256="0vvcqjrh8psl480s4q2830rzm2bwy9mmvk9kipp72lzln51qnha6"; depends=[]; }; MCDA = derive2 { name="MCDA"; version="0.0.21"; sha256="1y37whbmzzghdav10l4w72sv6dzdxfhij7vkq5217ajkn2cm06mg"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; }; MCI = derive2 { name="MCI"; version="1.3.3"; sha256="1wn8lcr5sq3697nsmly6syb9jv7p99ks0fy933ff5rx54x3rf9hz"; depends=[]; }; + MCID = derive2 { name="MCID"; version="0.1.0"; sha256="034r4qxbqnl9hhkpv9r79p26lzj5qh0379ya43ynyvbbi8b8z3rl"; depends=[]; }; MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; }; + MCM = derive2 { name="MCM"; version="0.1.3"; sha256="0pi4dzpfsk4rhm4bzr34y8lslyv2wwi2prams4f6bw0ilcmwqswk"; depends=[broomExtra dplyr gee lme4 stringr]; }; MCMC_OTU = derive2 { name="MCMC.OTU"; version="1.0.10"; sha256="15k3y4bm4cxjb6r30afpw9gksflsxigzb17zwm1ipygq0d0h0zkg"; depends=[coda ggplot2 MCMCglmm]; }; MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.4"; sha256="0v0d43wnq3swbrcsbg9qmwkmk4s50grd6cik4ng5baj2i6i4hd2n"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; @@ -2557,7 +2649,7 @@ in with self; { MCMCpack = derive2 { name="MCMCpack"; version="1.5-0"; sha256="1khavqsimiwbfq7gyw5jyj67jxfd579pnc7mngnd655zc8yzspvr"; depends=[coda lattice MASS mcmc quantreg]; }; MCMCprecision = derive2 { name="MCMCprecision"; version="0.4.0"; sha256="0r0qchiv61sk3drrb0rhwsk55gci4w343hd2gsvclrlyb8r9qhaf"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; MCMCtreeR = derive2 { name="MCMCtreeR"; version="1.1"; sha256="00r6f62h7ryil7qxd25icvkqypjjssjsrz4i5sbqsnw5cdy5al8z"; depends=[ape coda sn]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.15.1"; sha256="0zn1vjncw2q8rnkzyb1rp0cc61nqzvrk4pq47wxzcwiczdp2grpx"; depends=[coda overlapping rlang rstan]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.15.3"; sha256="0519pm6khya2jxkqbyiv6h17m0ijczivq7sfn3i8jmgvz4r7zqmr"; depends=[coda overlapping rlang rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10.1"; sha256="0j15dpxy62vwbd6pcsvkbpi1nklh0yjzwf53kcmv4jhj0v6xmpp9"; depends=[lattice mvtnorm]; }; MCPModGeneral = derive2 { name="MCPModGeneral"; version="0.1-1"; sha256="0izhbiivlb818ak49hl1f7li1chlyrxk5f80cmw4zkim3l6ddaxq"; depends=[DoseFinding MASS]; }; @@ -2570,7 +2662,7 @@ in with self; { MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; MDBED = derive2 { name="MDBED"; version="1.0.0"; sha256="1r3sizb2mqd4pqjy25krwmsjfkr6cl7lkd8db5jn3hgxx3qh6sgc"; depends=[doParallel foreach ggplot2 lattice orthopolynom psych Rdpack]; }; MDFS = derive2 { name="MDFS"; version="1.2.0"; sha256="17w243j77l3kcqf4hpzk3mp2csvcs8ax8sj6jm0qrngckl5d123h"; depends=[]; }; - MDMAPR = derive2 { name="MDMAPR"; version="0.2.2"; sha256="0psryv1n3fnsannr7014qwqkg4mr6k44nvzji5bw6647hf0vww3m"; depends=[berryFunctions bslib DBI dplyr DT ggplot2 htmltools htmlwidgets leaflet leaflet_extras plotly reactable readxl RMySQL shiny shinydashboard shinyjs shinyWidgets writexl xfun]; }; + MDMAPR = derive2 { name="MDMAPR"; version="0.2.3"; sha256="0w2n6qrjvyzf2wc1yw8a8k027g3y3w2k0z6wkwnj1p8q5zg24c66"; depends=[berryFunctions bslib DBI dplyr DT ggplot2 htmltools htmlwidgets leaflet leaflet_extras plotly reactable readxl RMySQL shiny shinydashboard shinyjs shinyWidgets writexl xfun]; }; MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; MDOLS = derive2 { name="MDOLS"; version="1.0"; sha256="02fkrv6yn2r0ryphvxhlnv05xxq3j824ijnj75dag3v9kinx1ar2"; depends=[]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; @@ -2581,7 +2673,7 @@ in with self; { MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; MED = derive2 { name="MED"; version="0.1.0"; sha256="0fy0qmxirkdz5kigy2r7l5czjzws0fhjxy13kv1kqh628ldrp109"; depends=[]; }; MEDITS = derive2 { name="MEDITS"; version="0.1.7"; sha256="0n3llnvpxd4bs1vslhmsahvl9vm0pmbmc94gijss16linpskxxkj"; depends=[ggplot2 hms raster rgdal rgeos sp tibble vegan]; }; - MEDseq = derive2 { name="MEDseq"; version="1.2.1"; sha256="0m22wr0zjlsflh4xrbimynghy2n6k0x78zii2y72xz87hms04ll6"; depends=[cluster matrixStats nnet seriation stringdist TraMineR WeightedCluster]; }; + MEDseq = derive2 { name="MEDseq"; version="1.3.0"; sha256="1nc18v1wfvnrmiip1bj3qim3fpf3nrracr9rsvlxw552vy33s39q"; depends=[cluster matrixStats nnet seriation stringdist TraMineR WeightedCluster]; }; MEGENA = derive2 { name="MEGENA"; version="1.3.7"; sha256="0cr10pmj1n831scz5kgaq3nkglr3imwgc62cxng2dvdxr9991g21"; depends=[BH cluster doParallel foreach fpc ggplot2 ggraph ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-3"; sha256="0fq85jrajfwavq2fvsw2x9hknc57wc253zw2vw970f04khfbragd"; depends=[lme4]; }; MEPDF = derive2 { name="MEPDF"; version="3.0"; sha256="15hbp7g5dsdpvi239jm6jn11fn371ir6la31g0flqkilq6sr1sqd"; depends=[gtools mvtnorm plyr pracma]; }; @@ -2592,18 +2684,18 @@ in with self; { MFAg = derive2 { name="MFAg"; version="1.8"; sha256="1kkcx6290ffk8g3amakaa5z5hz07z9iiqp2jxvma4pk85w6qay83"; depends=[]; }; MFDFA = derive2 { name="MFDFA"; version="1.1"; sha256="0nr78p6y4jpg1hrl0h7b7hyvwbr61paf85y3f2dx815x5hscmdhy"; depends=[numbers]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; - MFPCA = derive2 { name="MFPCA"; version="1.3-6"; sha256="1xync706kn4l0ky9fbj13f76r34bs95qp32pnsawa3qqsipxi2w3"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; + MFPCA = derive2 { name="MFPCA"; version="1.3-8"; sha256="0m85vsycqx3lnfn1x79qpdc7hvlngyw0g3h1hj2z49npyz5is45r"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="2.0"; sha256="0n1xws3dw0650037qyqgp600p8cf098qa5hkbncdfdbl0w34qamy"; depends=[]; }; - MGBT = derive2 { name="MGBT"; version="1.0.4"; sha256="1x2yqfb5diqkq82j81slh9kxzxgyy67axyqlqjpv237yf8p0djc0"; depends=[]; }; + MGBT = derive2 { name="MGBT"; version="1.0.7"; sha256="0wrw5yjaw3sgsw0l8q5gq95i5q1wxwgcffkxkxaa1cygblrrz12y"; depends=[]; }; MGDrivE = derive2 { name="MGDrivE"; version="1.6.0"; sha256="0ynn7iwxi5yfpjyrvfr6ym4ns7h8qfy8c10clab7i72pv90jqqlr"; depends=[R6 Rcpp Rdpack]; }; MGDrivE2 = derive2 { name="MGDrivE2"; version="1.1.0"; sha256="18pkv3gr2c2qi6p8x2d9wx713k1x251s49qaj2airqy84x2zd8dh"; depends=[deSolve Matrix]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; MGLM = derive2 { name="MGLM"; version="0.2.0"; sha256="0yyqm53lvp59zy8lkffw9x3zhqrnh29j5v3yyzk6qrgj2slnc7nk"; depends=[]; }; - MGMM = derive2 { name="MGMM"; version="0.3.1"; sha256="1q33p1syvw8q4akl172ndcbl23gw2nfsx40dyafl349h5bqyj6rk"; depends=[cluster mvnfast plyr Rcpp RcppArmadillo]; }; + MGMM = derive2 { name="MGMM"; version="0.4.0"; sha256="0yv78qcvnsan3iaxw2kglfkq8w089hz5a3a7xyg1bgw3xpwbsy13"; depends=[cluster mvnfast plyr Rcpp RcppArmadillo]; }; MGMS2 = derive2 { name="MGMS2"; version="1.0.2"; sha256="04f1ng4s163x7gvy1iaf0j8pzs0pm2r2saji0srbp2jyhrj68d7z"; depends=[MALDIquant MALDIquantForeign]; }; MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; MGSDA = derive2 { name="MGSDA"; version="1.6"; sha256="03n7ngfbh87hhgpkjkc1a0zjslr0k9zip1prvbwhyqkfq21zajbr"; depends=[MASS]; }; - MHCtools = derive2 { name="MHCtools"; version="1.3.0"; sha256="1vfyq2c2lrx2vsxz969pif38gw0vsh0bixyr3wh1rvswbw9wlj0b"; depends=[]; }; + MHCtools = derive2 { name="MHCtools"; version="1.4.0"; sha256="1hb292hjxaqdw494i6pqg51w2kjkqamfqvrkja9v3pq02hfggc0v"; depends=[mgcv]; }; MHMM = derive2 { name="MHMM"; version="1.0.0"; sha256="0d3djaydw0h7x3vlaghrbgmx024rgv36wfsjhlixzzssb2d6lqzi"; depends=[BH ggplot2 gridExtra Rcpp RcppArmadillo reshape2]; }; MHTcop = derive2 { name="MHTcop"; version="0.1.1"; sha256="1mr8y8brsi37b5qx3fqm0bj90dgknzzwhxfmvyd9kxbxh19whgxq"; depends=[copula matrixStats MCMCpack mvtnorm stabledist]; }; MHTdiscrete = derive2 { name="MHTdiscrete"; version="1.0.1"; sha256="0czpsk4jiwbzd6g2dwssmggsdhwchikmc1skv48d9j4xvglns7yw"; depends=[]; }; @@ -2611,23 +2703,27 @@ in with self; { MHTrajectoryR = derive2 { name="MHTrajectoryR"; version="1.0.1"; sha256="13idcjx7pjpwvr4c52938yqhhaj1gprb8hjhaim3jx4062wf9pla"; depends=[mgcv]; }; MHadaptive = derive2 { name="MHadaptive"; version="1.1-8"; sha256="1w3bm82v8ahxrf0vqn0pznv7dqn212drinkz8y5kr1flx423l9ws"; depends=[MASS]; }; MIAmaxent = derive2 { name="MIAmaxent"; version="1.2.0"; sha256="0r4q1735f7apfj0jz4f52ra7sisbkkkk2n6i0kii3q64sx2h3xbj"; depends=[dplyr e1071 raster rlang]; }; + MICsplines = derive2 { name="MICsplines"; version="1.0"; sha256="1ig3329akcaq6lk17nnid64qgz1i8spy11f1gawnbmp2x6z6y8wc"; depends=[]; }; MIDASwrappeR = derive2 { name="MIDASwrappeR"; version="0.5.1"; sha256="07108dg16i20fg6cvsnbflfz65smwk08vjmf1b193zyvhdikwhfm"; depends=[Rcpp]; }; MIDN = derive2 { name="MIDN"; version="1.0"; sha256="08i9zfmaywi5imp36ahjpirlkl55k01x543nz95i089w3sfrsz0g"; depends=[BiasedUrn]; }; MIICD = derive2 { name="MIICD"; version="2.4"; sha256="1xlvhyh3gg77cym10i8hrxm8r1jm4plvny2c4izic6w89snplyq6"; depends=[MASS mstate survival]; }; - MIIVsem = derive2 { name="MIIVsem"; version="0.5.5"; sha256="0x4dm9l8hn7hahbdkp0i9azqwr94s33wmk32zmmhgaq4f60wlhcw"; depends=[boot car lavaan Matrix numDeriv]; }; + MIIPW = derive2 { name="MIIPW"; version="0.1.0"; sha256="05l75pr81fv7b7w24mhvww5c49211bnxvksvy7kiwypc592zwjqk"; depends=[matlib R2jags]; }; + MIIVsem = derive2 { name="MIIVsem"; version="0.5.8"; sha256="1qb1xrxhgj6b0l24spbp80f0rm8v41bqsdachqjhsacq2lgga259"; depends=[boot car lavaan Matrix numDeriv]; }; MILC = derive2 { name="MILC"; version="1.0"; sha256="14xsiw5al6kixwvf3ph0dlm8s13gsbqvzb92da6ng3x4iiyb1g0w"; depends=[]; }; - MIMSunit = derive2 { name="MIMSunit"; version="0.10.0"; sha256="0yw9rpbbx6x85g4ksp1x233xv311d6ss7rm2as509vkglk1cr7nw"; depends=[caTools dplyr dygraphs ggplot2 lubridate magrittr matlab plyr R_utils RColorBrewer readr shiny signal stringr tibble xts]; }; + MIMSunit = derive2 { name="MIMSunit"; version="0.11.0"; sha256="03mzjf86qs9kqpqn9vqspfv4jkx52s3yvgr3nk1p28w5qhdi2nq5"; depends=[caTools dplyr dygraphs ggplot2 lubridate magrittr matlab plyr R_utils RColorBrewer readr shiny signal stringr tibble xts]; }; + MINTplates = derive2 { name="MINTplates"; version="1.0.1"; sha256="1jj51314p2ni3f3ncpd8gp7pgshhsp97ic123d732sc9xr0h5rnr"; depends=[]; }; MIPHENO = derive2 { name="MIPHENO"; version="1.2"; sha256="0hcaq66biv4izszdhqkgxgz91mgkjk1yrwq27fx07a2zmzj44sfv"; depends=[doBy gdata]; }; MIRES = derive2 { name="MIRES"; version="0.1.0"; sha256="17k6f73qx85klhhn247nr6h7sinpabq9crlc5ag7qm6z7k6mr370"; depends=[BH cubature dirichletprocess Formula HDInterval logspline mvtnorm nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders truncnorm]; }; + MIWilson = derive2 { name="MIWilson"; version="1.0.0"; sha256="1iclwvhbhnkls3jvz3ihjrxhzhahdg0g0ii7x39mxhw973fh423l"; depends=[dplyr magrittr mice]; }; MIXFIM = derive2 { name="MIXFIM"; version="1.1"; sha256="1xx25b7hfyzynfh3vsqrkriqnqnn173gn8j1vwqmc434c1vy4nx2"; depends=[ggplot2 mvtnorm rstan]; }; MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; MKLE = derive2 { name="MKLE"; version="0.05"; sha256="00hcihjn3xfkzy0lvb70hl2acjkwk6s3y7l4gprix24shnblvxzi"; depends=[]; }; MKclass = derive2 { name="MKclass"; version="0.3"; sha256="0sw0h99k24418iqvvq247kg5558y9mgashr5amay7gbf2va79v6j"; depends=[]; }; - MKdescr = derive2 { name="MKdescr"; version="0.6"; sha256="14rqbamvf9ndk4ivcpvrcl4ad1nar6gfk9m3q7pb5fg8gs39wypn"; depends=[ggplot2 scales]; }; + MKdescr = derive2 { name="MKdescr"; version="0.7"; sha256="056gp5fig8l4wgv3hzphr5q81z1zi6x88abc4kzgg8f1ljpn37xf"; depends=[ggplot2 scales]; }; MKinfer = derive2 { name="MKinfer"; version="0.6"; sha256="13ga5pwlnlm28dm6nxg4ccc7br51jg7wvwp61sx31yvzgr5m45ld"; depends=[arrangements boot ggplot2 MKdescr nlme]; }; - MKmisc = derive2 { name="MKmisc"; version="1.6"; sha256="0x518icdgq4mrc6qm1flb5lpr9y7j9znh0ah3gw2xsbjiplqd323"; depends=[ggplot2 limma RColorBrewer robustbase scales]; }; - MKomics = derive2 { name="MKomics"; version="0.5"; sha256="0mr0y1ai3jf3jj4dqvs6xv3clgli7d7lzqk8ya6zah388rqmkg9s"; depends=[limma RColorBrewer robustbase]; }; + MKmisc = derive2 { name="MKmisc"; version="1.8"; sha256="1d94vnj0ffw15gd0xfpz245y0qi7xw61qwsqan3bahskjdwrgdgl"; depends=[ggplot2 limma RColorBrewer robustbase scales]; }; + MKomics = derive2 { name="MKomics"; version="0.7"; sha256="0ck8i7ip12bb6wilmwhdrbdmf56ymm3rp6973lr1p4bc2m2kvhif"; depends=[circlize ComplexHeatmap limma RColorBrewer robustbase]; }; MKpower = derive2 { name="MKpower"; version="0.5"; sha256="1yr9yk7x8da2b8hj71v4f5c2nikljbr6ayqp004whdi2bh67v95n"; depends=[coin ggplot2 matrixTests MKdescr MKinfer qqplotr]; }; ML_MSBD = derive2 { name="ML.MSBD"; version="1.2.1"; sha256="1cpwq0vilbyz837d8k8pjipw3cwdsggbs88nwp827s4w2f1m7pap"; depends=[ape foreach]; }; ML2Pvae = derive2 { name="ML2Pvae"; version="1.0.0"; sha256="0laazb78qz6348kdyivb062nrmiz45imr3l3ck338a230avy4w4d"; depends=[keras reticulate tensorflow tfprobability]; }; @@ -2647,7 +2743,7 @@ in with self; { MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLRShiny = derive2 { name="MLRShiny"; version="0.1.0"; sha256="06zcyz8l4754sjbcql3jd3nq1d2lgj92p5h2bh708z52mww71isw"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; MLRShiny2 = derive2 { name="MLRShiny2"; version="0.1.0"; sha256="1ygamp0ldz1i0w2xyi205rpd1gd5asw61l36z06j41ghdyiz1lww"; depends=[corrgram dplyr forecast psych QuantPsyc shiny shinyAce]; }; - MLVSBM = derive2 { name="MLVSBM"; version="0.2.1"; sha256="10yw8w4ahxbzc58zkknjpy6v11pfyjr9yhzlri1zw77ivf4krbra"; depends=[ape blockmodels magrittr R6]; }; + MLVSBM = derive2 { name="MLVSBM"; version="0.2.2"; sha256="0cxjk89i1pjq829168ad30dw73x65ywsc4d6vj6q6wlg746a1izf"; depends=[ape blockmodels cluster magrittr R6]; }; MLZ = derive2 { name="MLZ"; version="0.1.3"; sha256="0yj9241k3yk8qy6w2q26gwbj9b9qynv3s3jpyfxixvkc9kji3wc2"; depends=[dplyr ggplot2 gplots RcppEigen reshape2 TMB]; }; MLeval = derive2 { name="MLeval"; version="0.3"; sha256="1g2w5lrr7199n4zyaalbp9xdgl858hdg1pqr3rpd7v5fmamawc69"; depends=[ggplot2]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; @@ -2658,37 +2754,36 @@ in with self; { MM4LMM = derive2 { name="MM4LMM"; version="2.0.2"; sha256="0zcaqxz1yxv2lkp39ly4jkl9wk94k7md5ks5wjk9l1qk7k5q7yx9"; depends=[MASS Matrix Rcpp RcppEigen]; }; MMAC = derive2 { name="MMAC"; version="0.1.2"; sha256="1xwz48iizf0lvmhc7krsraabc49ky85qvgr23w4ip6jzfv4sn1jr"; depends=[]; }; MMD = derive2 { name="MMD"; version="1.0.0"; sha256="0cz009ndsvlk4hvvyl49l0d68z3b7z083r26z52lizbmw7zaxvbv"; depends=[bigmemory e1071 plyr]; }; - MMDCopula = derive2 { name="MMDCopula"; version="0.1.0"; sha256="0xldnz4393hqkidfy03mdb8ia3nycdj5q3s37j8q05m0pn4pjk1z"; depends=[cubature pcaPP randtoolbox VineCopula]; }; + MMDCopula = derive2 { name="MMDCopula"; version="0.2.0"; sha256="042a0488i8jgrmlzxm746d45gvhg7s66s8xqz5pwkfskx2qzhdqv"; depends=[cubature pbapply pcaPP randtoolbox VineCopula]; }; MMDai = derive2 { name="MMDai"; version="2.0.0"; sha256="0b9lksql266sqhxy4k3chz2pcaabgijkp7g0v4pm7ci5v50d4vag"; depends=[]; }; MMDvariance = derive2 { name="MMDvariance"; version="0.0.9"; sha256="1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi"; depends=[Biobase lawstat MASS]; }; MMLR = derive2 { name="MMLR"; version="0.2.0"; sha256="1jc33ani6w54j38kxzk0kfj1hjfk80cil2hdja2hcsk6kqwd431d"; depends=[pracma]; }; - MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; }; MMRcaseselection = derive2 { name="MMRcaseselection"; version="0.1.0"; sha256="093bp2c988p82wqz0cq9ra4bd06647v12n6yk1rgr2bvvygg1i8f"; depends=[ggplot2]; }; MMVBVS = derive2 { name="MMVBVS"; version="0.8.0"; sha256="08nkhrf62yywpm0nw22pqzlcm72sf4zq44640a7pf57bbzm38ccy"; depends=[ggplot2 Rcpp RcppArmadillo reshape reshape2 rlang]; }; MMWRweek = derive2 { name="MMWRweek"; version="0.1.3"; sha256="1l1ks44v52iggw9nhs56lfj6804yab5b17k8fzrc6h1kvj3vda0s"; depends=[]; }; - MMeM = derive2 { name="MMeM"; version="0.1.0"; sha256="1b0wdcyqnliw85il5vnwy9l4x1z42kirbg872hl47plwfrp9gahc"; depends=[jointDiag lme4 MASS Matrix matrixcalc psych stringr]; }; + MMeM = derive2 { name="MMeM"; version="0.1.1"; sha256="1cig085h2jvrpb904wglwvhvds3sn58wpbl081wcwvzipfa8y37s"; depends=[jointDiag lme4 MASS Matrix matrixcalc psych stringr]; }; + MNARclust = derive2 { name="MNARclust"; version="1.0.0"; sha256="1grmcik4pn9n2s5xn057rf0j0bz2gl6yd98qd1laz11sfgvbncz9"; depends=[Rcpp RcppArmadillo rmutil sn]; }; MNB = derive2 { name="MNB"; version="1.0.0"; sha256="0qb682mfiprnrqfgyzwl564krhh6lms15gr4m44kkk3f5cdqxrmf"; depends=[flexsurv numDeriv]; }; MNLR = derive2 { name="MNLR"; version="0.1.0"; sha256="0q80232ndp7pkklzqdbga1vf51dmsxaivm4ia4wah32rc2c87fqp"; depends=[caret e1071 nnet rmarkdown shiny]; }; - MNLpred = derive2 { name="MNLpred"; version="0.0.6"; sha256="0j2cckskd4d5mnssy64nzkimp5qyrvkcsqmbigmi7lr52iga7m3s"; depends=[MASS]; }; + MNLpred = derive2 { name="MNLpred"; version="0.0.8"; sha256="0wb1a3d5s9hrv3sw8g1vyr9w9gmig4sdj3l339cv5cjfca75swns"; depends=[MASS]; }; MNM = derive2 { name="MNM"; version="1.0-3"; sha256="16b2yrm2kn943vzrr38qhk6qq20a842xv7iiln4is02csijxw2b3"; depends=[ellipse ICS ICSNP SpatialNP]; }; - MNP = derive2 { name="MNP"; version="3.1-1"; sha256="0hzm048afxick1r8y26dj478mn9kwaww5v2s0b9ks1i01vbjakcl"; depends=[MASS]; }; + MNP = derive2 { name="MNP"; version="3.1-2"; sha256="1w27vx68k6ysh6vz8957242xwklj8b8hakmdpzra12pph332plbq"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; MOCCA = derive2 { name="MOCCA"; version="1.4"; sha256="0g70s7hnmrp4sm8gx49vsijj54y4amlcy6axc4k37k4c9g4sdics"; depends=[cclust class clue cluster]; }; - MODIS = derive2 { name="MODIS"; version="1.2.3"; sha256="03bl3a248cx3kd3szqy96vnz4sbccfnj755y6fq2b81ykpw5x47q"; depends=[bitops curl devtools mapdata mapedit maps maptools ptw raster rgdal rgeos sf sp]; }; MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; MODISTools = derive2 { name="MODISTools"; version="1.1.1"; sha256="0188cffsnpy7nmb0c03i64674xyizx6imkymrwsj3mf9s77wa2v0"; depends=[httr jsonlite memoise raster sf]; }; - MODIStsp = derive2 { name="MODIStsp"; version="2.0.5"; sha256="0qrgb5gx550ybx6j8zvdjzrvrp02vigh5gp9iz3pa9mc24665ml4"; depends=[assertthat bitops data_table gdalUtilities geojsonio httr jsonlite raster sf stringr xml2 xts]; }; + MODIStsp = derive2 { name="MODIStsp"; version="2.0.6"; sha256="1rgms8041f3gk5x97nhr9hzcnc3qim3w12f5hm2q68m54bhjg2mw"; depends=[assertthat bitops data_table gdalUtilities geojsonio httr jsonlite raster sf stringr xml2 xts]; }; MOEADr = derive2 { name="MOEADr"; version="1.1.1"; sha256="0aqkqw5ph5rvsgpasc94i264lxapr37gpjhk4rkkynph2gnvq1zx"; depends=[assertthat FNN]; }; MOLHD = derive2 { name="MOLHD"; version="0.2"; sha256="1lrl24x7iig15jwxigvqm3jdwnxkn948sxmywn6zi2b1a5hqz05k"; depends=[arrangements fields]; }; MOQA = derive2 { name="MOQA"; version="2.0.0"; sha256="17w4iwf38k0r2fiwqr420hkbbz1a3r89sqwnd2yn300zmaz64hpr"; depends=[gplots psych readr]; }; - MOSS = derive2 { name="MOSS"; version="0.1.0"; sha256="0qxqh92ypsx39zjdsyg8icml74ig24igmi8nbzg6dnslvl1f9sfm"; depends=[cluster dbscan Rtsne]; }; + MOSS = derive2 { name="MOSS"; version="0.2.0"; sha256="1sgyjswvr34js96avv5czqil6jlvn53l8wdj28lqicm8m5c9qkwq"; depends=[cluster dbscan Rtsne]; }; MOST = derive2 { name="MOST"; version="0.1.0"; sha256="0nmjx5hsn67hdglcqyanq3az76rs15knv8qy28f8paah5s9w24xf"; depends=[]; }; MOTE = derive2 { name="MOTE"; version="1.0.2"; sha256="17y2l2rmw7fhvknyh5z09i7hd8nhamx12g00rcymp75gqkz9lzc7"; depends=[ez MBESS reshape]; }; MOrder = derive2 { name="MOrder"; version="0.1"; sha256="1vhy20xyvfc18f04hvlb1jm2n0caaz8ysy13w2rra5i4kjdvz52i"; depends=[]; }; MPAgenomics = derive2 { name="MPAgenomics"; version="1.2.3"; sha256="0096jy94zpbbd2n862hc4m3i4s7vpl2q3vybx96hvv6qi1ny47cm"; depends=[changepoint glmnet HDPenReg R_utils spikeslab]; }; MPBoost = derive2 { name="MPBoost"; version="0.1-3"; sha256="0fmyy4s2h7hjca6nww0bgcax7309nkqp295mpp8hl8yllz7ylmsm"; depends=[BH Rcpp]; }; MPCI = derive2 { name="MPCI"; version="1.0.7"; sha256="1l55q09lliv0y4q1hc0jgzls47wkmsfag6b4iq5y6wrllr5wq7sa"; depends=[]; }; - MPDiR = derive2 { name="MPDiR"; version="0.1-19"; sha256="14bjb9c1v2si3gan1pfvvhmfa46q1qrn606sb4zvrqpfs8f7wil7"; depends=[]; }; + MPDiR = derive2 { name="MPDiR"; version="0.1-20"; sha256="1mm4mv042jr0n7z5cdaij39zrg2475p83gd3dxq6krz9yq8ii1q3"; depends=[]; }; MPGE = derive2 { name="MPGE"; version="1.0.0"; sha256="10lzkk8fhpxd1z4yp051q3k36fsvddrwssv7nn03r2bkp6q8rpzb"; depends=[car purrr]; }; MPINet = derive2 { name="MPINet"; version="1.0"; sha256="1zw3piqhhpagg5qahc2xahxxfdwdk8w94aass1virlpl0f52ik8s"; depends=[BiasedUrn mgcv]; }; MPLikelihoodWB = derive2 { name="MPLikelihoodWB"; version="1.1"; sha256="0xgj349jkv29ldia4lmsiwnkhrk99aqcrvyiy3si5knmi1jvx9q0"; depends=[MASS survival]; }; @@ -2696,7 +2791,7 @@ in with self; { MPR_genotyping = derive2 { name="MPR.genotyping"; version="0.8"; sha256="0lsrbks7nhfnrmk8kclh09rc132j3divjxrzjfrg8zijbzkfx1pn"; depends=[qtl]; }; MPS = derive2 { name="MPS"; version="2.3.1"; sha256="08yzynznf33y7y3pf7fayks5hi3cdvzwzn8axg7aky5kvi2bfv22"; depends=[]; }; MPSEM = derive2 { name="MPSEM"; version="0.3-6"; sha256="0kw3aixhl5j8nq4lcx65l80v4lihvpa4qd12n2jrc96lnm6mw00b"; depends=[ape MASS]; }; - MPTinR = derive2 { name="MPTinR"; version="1.13.0"; sha256="16824bydfgm3wf63hrf9lwqwybdvrl3835pk8irl482y6v6x3h91"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; + MPTinR = derive2 { name="MPTinR"; version="1.14.1"; sha256="0jywv5kim3vdfq0dfaxjksq8l2i6ny45rn5ibmb7ximwfjm3syp0"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPTmultiverse = derive2 { name="MPTmultiverse"; version="0.4-2"; sha256="0fjfj8jk0dk1s3jc9rl9kza6gm5pm6dgsqyk0aq7pir2hrsr3qwy"; depends=[coda dplyr ggplot2 limSolve magrittr MPTinR purrr readr reshape2 rlang runjags tibble tidyr TreeBUGS]; }; MPV = derive2 { name="MPV"; version="1.57"; sha256="1b2xxkh55lzz9addjxa0jjp3lrpf6c31knah4xwhgbmrg4r6rl0n"; depends=[KernSmooth lattice]; }; MPkn = derive2 { name="MPkn"; version="0.1.0"; sha256="0nvd6sv1wypcmphm0wcymbibcxrqzx3c9s9b191p1pmxyz607vxv"; depends=[]; }; @@ -2718,52 +2813,54 @@ in with self; { MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MSCMT = derive2 { name="MSCMT"; version="1.3.4"; sha256="1vh0i9nxqiy3qdnb7z7cn5kpp2jahdmaqpnv7q5650pkswhwmfpc"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; MSCquartets = derive2 { name="MSCquartets"; version="1.1.0"; sha256="1rik3ma537qkj63j5v0gcf6g3qi68z49w21z96mm88b7nq15xpjh"; depends=[ape doParallel foreach phangorn RandomFieldsUtils Rdpack zipfR]; }; - MSEtool = derive2 { name="MSEtool"; version="3.0.2"; sha256="185jk4bciyi5m5xwmhzml6a7kw245jws0c2jb5qdi24iwl2j68wb"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo snowfall]; }; - MSG = derive2 { name="MSG"; version="0.6"; sha256="19pckq41gyy4m97ag5q97lbdchl4fpx9xd8xv9r0jmlj66mz2dm7"; depends=[RColorBrewer]; }; + MSEtool = derive2 { name="MSEtool"; version="3.2.0"; sha256="0xlbq5c32dhv610van59w3kdk7vhpsc8g6s8xsv0pjglz7z4j1hv"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo snowfall]; }; + MSG = derive2 { name="MSG"; version="0.8"; sha256="178209p30fmh3c03w8iakz306h2xswcj4ffxg1s9s8md156rbj7s"; depends=[RColorBrewer]; }; MSGARCH = derive2 { name="MSGARCH"; version="2.42"; sha256="1n5fvj6yx8sfi1vizw89410hc0d37w8mpqfsksdv01pgnfdcs11a"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; MSGARCHelm = derive2 { name="MSGARCHelm"; version="0.1.0"; sha256="172xpvs98b9ay44ffb8bp9k4zsjzhy92pp7bv3d1j186pqhl13ib"; depends=[forecast MSGARCH nnfor]; }; MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; }; - MSMwRA = derive2 { name="MSMwRA"; version="1.3"; sha256="0b0fqfv6iick1brqik4rqz2936nfa51i6xlfavs65r9692wks73q"; depends=[]; }; + MSMwRA = derive2 { name="MSMwRA"; version="1.5"; sha256="062d37h47p3sx65k5jh8n900dfzm1mvi18ikral3ajdhy7x2cif9"; depends=[]; }; MSPRT = derive2 { name="MSPRT"; version="3.0"; sha256="0fvikvnf3fa4ski9idg8llxx33bgkrfj5sgkjn0d1dz30kgcx2w2"; depends=[doParallel foreach ggplot2 ggpubr iterators nleqslv]; }; MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; MSRDT = derive2 { name="MSRDT"; version="0.1.0"; sha256="1i35zsip6p177k9pnbmvkjdc1hpr6nclhbx2sfah95ls5v6xnzz8"; depends=[dplyr gtools reshape2]; }; MSSQL = derive2 { name="MSSQL"; version="1.0.0"; sha256="15glgn2dr1yygxps0mx68435zqc2hi4hvgr4rvgrwyxdnlm5g35y"; depends=[RODBC]; }; MST = derive2 { name="MST"; version="2.2"; sha256="0p833nyq9p0r0hy02f4sy6gv1wm9flj3dxkv73ihy8503r89bbzz"; depends=[Formula MASS partykit survival]; }; - MSbox = derive2 { name="MSbox"; version="1.3.9"; sha256="08aqhcnsv0a5gaq69fnfw7vj223s7nwq2skbd6fgqnr6yvpwbsyp"; depends=[crayon ggfortify ggplot2 plotly reshape2 stringr xml2]; }; + MSbox = derive2 { name="MSbox"; version="1.4.0"; sha256="0v0prgrnvfr57934lra9w15danzygqnm3mi9n2k2jrkmcdj8dsrm"; depends=[crayon ggfortify ggplot2 plotly reshape2 stringr xml2]; }; MScombine = derive2 { name="MScombine"; version="1.4"; sha256="0s3gbf3s5mf00d5mkbqhd9wwnyps7qb4r3zbal8j8nsaspql9nd3"; depends=[plyr]; }; - MSwM = derive2 { name="MSwM"; version="1.4"; sha256="1zhfar02s7hm4gjs1flkh9a4526d98hik8bqrksy75758baiqg7l"; depends=[nlme]; }; + MSiP = derive2 { name="MSiP"; version="1.3.7"; sha256="1n8yl5icd3qkpmx2knxsp4g6jvkbg6hl82jxg9apxkx4nmsvkawz"; depends=[caret dplyr e1071 magrittr mice plyr pROC PRROC ranger tibble tidyr]; }; + MSwM = derive2 { name="MSwM"; version="1.5"; sha256="0ny5apvww1537qhiwb3f8x173rh7mypvgpw0i46dkvn897i0dq36"; depends=[nlme]; }; MTA = derive2 { name="MTA"; version="0.3.0"; sha256="01q98k88vqf0avnfavlscfkgsixm76hi4gip0iwl28w89z09bc0n"; depends=[cartography igraph sf]; }; MTAR = derive2 { name="MTAR"; version="0.1.1"; sha256="17r2da1hdvs8qvgar87zdl51jy8w30vczcsi6jrq0rdyi1lld641"; depends=[CompQuadForm MASS Matrix]; }; MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; + MTE = derive2 { name="MTE"; version="1.0.1"; sha256="0ybzf8fsysxld9d17jh1wggglaa58n5szynnrhif12cifgcrl2dx"; depends=[glmnet quantreg]; }; MTLR = derive2 { name="MTLR"; version="0.2.1"; sha256="070121qn7vmxmxgvzv7ymhk19j9kxks4xa7qpd8vkc2rp3ara4cp"; depends=[Rcpp RcppArmadillo survival]; }; MTPS = derive2 { name="MTPS"; version="1.0.1"; sha256="1jdlw943ywmrp64w1qrjqymqjh2jahnq0i5px8af1l3msznj20x4"; depends=[class e1071 glmnet MASS rpart]; }; - MTS = derive2 { name="MTS"; version="1.0"; sha256="09pypanjmqrvxbrrckydxyyswsgjx4nhb052x4llk7va9w4lbcjs"; depends=[fBasics fGarch mvtnorm Rcpp]; }; + MTS = derive2 { name="MTS"; version="1.0.3"; sha256="1v1pid42a7jw4qrvp2y3pqzfn6vcldfkgvny5c6z8bsrjlc9ah8n"; depends=[fBasics fGarch mvtnorm Rcpp]; }; MTSYS = derive2 { name="MTSYS"; version="1.2.0"; sha256="04dkan3hxl3difflskp7d1lw1bvxhg4s28ssy2v4m7z7wbpj3v1m"; depends=[]; }; MUACz = derive2 { name="MUACz"; version="2.1.0"; sha256="1d771vb2aimr87kyqj7zkmwarmxcxzbh7mvr396pf2zr3h8wi30c"; depends=[dplyr epiDisplay ggplot2]; }; MUS = derive2 { name="MUS"; version="0.1.6"; sha256="0xid624rz0mvd03iy7ydvmx7gkscvsg4kdbaf2nji54ahai3pmn3"; depends=[]; }; MVA = derive2 { name="MVA"; version="1.0-7"; sha256="00vng8z157qn0bj2mcnz31r6mn1a119vja9pzhpdkhkbvvd6ph5v"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; - MVN = derive2 { name="MVN"; version="5.8"; sha256="1rk8zrf3bavywv4bca1aqsfrirxkvxh5lfwrnj0g8zncd69bd1fc"; depends=[boot car energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; + MVN = derive2 { name="MVN"; version="5.9"; sha256="014s07nxq014j5hkbd6iwwqykcw8si5sah57gi3n0wb51sv8ip1k"; depends=[boot car energy MASS moments nortest plyr psych]; }; MVNBayesian = derive2 { name="MVNBayesian"; version="0.0.8-11"; sha256="1iaxyp480v91887cn4w3l74907wvbzs3ay4cjgzd8xk2dp47w8bg"; depends=[mvtnorm plyr]; }; MVNtestchar = derive2 { name="MVNtestchar"; version="1.1.3"; sha256="0w5008zknrl5r7l4dmj2fbm7vvg2f1wynzf38kabns4j7hb1nmxw"; depends=[ggplot2 Hmisc knitr]; }; MVQuickGraphs = derive2 { name="MVQuickGraphs"; version="0.1.2"; sha256="1937w8y866bsn9kn6a98c91akhm9ddc5dr9wqm51lkbjyz1zm0j1"; depends=[plotrix]; }; MVR = derive2 { name="MVR"; version="1.33.0"; sha256="1ygz47a2p5r5axql5zsxvsn25pcqyxz6mpw50zfmzrcqdrfa3bg8"; depends=[statmod]; }; - MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; - MVTests = derive2 { name="MVTests"; version="2.0.3"; sha256="1570npawv03nb5czikkl63swgx3dafxhmdpm2mlcwi0nfhbc69xm"; depends=[]; }; - MVar = derive2 { name="MVar"; version="2.1.4"; sha256="0lr16b54yg8yz6sh29v7vsg6h94f23005xm4fwk39h8jgw7v4d99"; depends=[MASS]; }; - MVar_pt = derive2 { name="MVar.pt"; version="2.1.4"; sha256="0bvinszi4nmz755i5d0nllkzqcq8q0qd54gvbwzbz992314lv2h7"; depends=[MASS]; }; + MVTests = derive2 { name="MVTests"; version="2.0.8"; sha256="00r23jxijsid67qdqaxgmq148njkbd6d5lbsfgzazx1v7scqih3x"; depends=[mvtnorm rrcov]; }; + MVar = derive2 { name="MVar"; version="2.1.8"; sha256="00mn0aqj2yvspi9jzx01d6aiwsxkfa7rp1ahh6p86bmf5j8rqanj"; depends=[MASS]; }; + MVar_pt = derive2 { name="MVar.pt"; version="2.1.8"; sha256="1hs39rybs3yih0nc0xhn3c1ip8z6pzdzvfki6fpx981f41lk9cwg"; depends=[MASS]; }; MVisAGe = derive2 { name="MVisAGe"; version="0.2.1"; sha256="1plrzzj7cr2hxk1npadvjnk7sanhilh99l5vrkjjh3l6li2ym09b"; depends=[]; }; MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; MWright = derive2 { name="MWright"; version="0.3.2"; sha256="1c57f0wnlhl4gqy17vi93r4fknycvv67b9bifgcvabws390jpx7q"; depends=[cubature]; }; - MXM = derive2 { name="MXM"; version="1.5.1"; sha256="16vy2cq4xxxl9c55s66xwjdi8fq98gyfjb06x4lnh6gbc9pj7g1x"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack Hmisc knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; + MXM = derive2 { name="MXM"; version="1.5.2"; sha256="0h95v74sk0c10i1rvbbl6f98spv86jfz7xji3d3wd1v4zacq3hhz"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack Hmisc knitr lme4 MASS nnet ordinal quantreg relations Rfast Rfast2 survival visNetwork]; }; MaOEA = derive2 { name="MaOEA"; version="0.6.2"; sha256="0s8jvp7821mb6xff8xwnh78mhz4qfrbk4g7sp4dfnm2ii7ah9c6b"; depends=[e1071 gtools lhs MASS nnet nsga2R pracma randtoolbox reticulate stringr]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; - MachineShop = derive2 { name="MachineShop"; version="2.8.0"; sha256="121r5h6hkvjlb1y3hbjaabgn19h5977ilf0mc6yz1gh9qlsr0y77"; depends=[abind dials foreach ggplot2 kernlab magrittr Matrix nnet party polspline progress recipes rlang rsample Rsolnp survival tibble]; }; + MachineShop = derive2 { name="MachineShop"; version="3.0.0"; sha256="0n73prfwsgk908xsskw8nacq5pfi2vjidnd83frd38jmaxiakv3d"; depends=[abind dials foreach ggplot2 kernlab magrittr Matrix nnet party polspline progress Rcpp recipes rlang rsample Rsolnp survival tibble]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MajKMeans = derive2 { name="MajKMeans"; version="0.1.0"; sha256="1zphrxyx3jd6rnh1y1qnc6bip34kfqk1a5ms4ps39gfngznh482m"; depends=[MASS]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; + ManagedCloudProvider = derive2 { name="ManagedCloudProvider"; version="1.0.0"; sha256="0glhx9ylpx2s8mi711gblapw6qnv80nd4wahph65g6ddngvmgv73"; depends=[adagio DockerParallel jsonlite]; }; Mangrove = derive2 { name="Mangrove"; version="1.21"; sha256="1qf3fjzf0sb6fqbfdbxwbw6wah3gg2qran4mgg13hcmk4n3j0hxp"; depends=[]; }; ManifoldOptim = derive2 { name="ManifoldOptim"; version="1.0.0"; sha256="1lds4cs4v3gpibz74cz319x2zkc6nipiqw1ywcrmv125aixxzglp"; depends=[Rcpp RcppArmadillo]; }; ManlyMix = derive2 { name="ManlyMix"; version="0.1.14"; sha256="0zpcc74965n435d4fah41r9nz0kjyn46hkjl1s0kvlllqj6n69wg"; depends=[]; }; @@ -2775,30 +2872,35 @@ in with self; { MargCond = derive2 { name="MargCond"; version="1.0.0"; sha256="07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8"; depends=[gee lme4 MASS Matrix]; }; MarginalMediation = derive2 { name="MarginalMediation"; version="0.7.0"; sha256="0jwp8rzv0ghir8k7dfmfrq4rvcqf7xww6va16p3jj2nk3r9hiq0x"; depends=[betareg boot cli crayon furniture magrittr purrr rstudioapi stringr tibble]; }; MarketMatching = derive2 { name="MarketMatching"; version="1.2.0"; sha256="075maishssvjrx0jfmxcfiv2rlhnm0c4dnp6ija3bn5z80i6z91m"; depends=[Boom bsts CausalImpact doParallel dplyr dtw foreach ggplot2 iterators reshape2 scales tidyr utf8 zoo]; }; - Markovchart = derive2 { name="Markovchart"; version="2.0.0"; sha256="1nrc88pdyyljqwszg60c663icz31mpydrgixzkys4a8f861by3b0"; depends=[doParallel foreach ggplot2 metR optimParallel]; }; + Markovchart = derive2 { name="Markovchart"; version="2.0.1"; sha256="0mdgsj7nb018125in7kic6pj60qljds0mhby2q5c1f65kvws59rd"; depends=[doParallel foreach ggplot2 metR optimParallel]; }; MarkowitzR = derive2 { name="MarkowitzR"; version="1.0.2"; sha256="0p234zs7lvi83fv02mijrhp7hmr5cklddayb61krhx1h2hn4gzb9"; depends=[gtools matrixcalc]; }; MaskJointDensity = derive2 { name="MaskJointDensity"; version="1.0"; sha256="0nxhsz57cw96in0sg5xg7sicv920kcnxr2rikn39y2qk4vrw6r78"; depends=[ks MASS np plyr]; }; Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; }; MasterBayes = derive2 { name="MasterBayes"; version="2.57"; sha256="0f8rc6799nji03slal27gbmprndy3dby0hhsmg2rm9l4ki44vz2y"; depends=[coda genetics gtools kinship2]; }; MatManlyMix = derive2 { name="MatManlyMix"; version="1.1.1"; sha256="1d2vd5b9lirdybjclxh0nn4mghq64qjj4l8vnj95cni5pfa18a2c"; depends=[]; }; MatSkew = derive2 { name="MatSkew"; version="0.1.5"; sha256="019v2b1r0bvw84xs50smjb3jdz7gd2adz5d84xd8zq43lnml96d1"; depends=[]; }; - MatchIt = derive2 { name="MatchIt"; version="4.1.0"; sha256="18bvk73mf70a8r9js2mg8fn0yj0i1d1xaj8qg1mhrdygp35nfixk"; depends=[backports Rcpp RcppProgress]; }; + MatTransMix = derive2 { name="MatTransMix"; version="0.1.14"; sha256="1dy2riah8hqlgngdfk3kyznrw7jzmc4rkmqakks6y5swisq61ixy"; depends=[mvtnorm]; }; + MatchIt = derive2 { name="MatchIt"; version="4.3.0"; sha256="0ijlv2gggxc6b9k0zcbni1dass1n4b312w66rgafn6bw3aw7m2fa"; depends=[backports Rcpp RcppProgress]; }; MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.3"; sha256="1si0zn6vlgyj08841hfjx8an96a8ipnawl4zbalabmpy7r5bfwx8"; depends=[Hmisc Matching]; }; - MatchThem = derive2 { name="MatchThem"; version="1.0.0"; sha256="11r8r7vij8ixa07g48pds993a5m7ir9m894wms5whrb8sxd47q5i"; depends=[MatchIt mice rlang survey WeightIt]; }; + MatchThem = derive2 { name="MatchThem"; version="1.0.1"; sha256="1g3vzbxrbmgmxlnn6i2i1wdk949i547ywgxcw05na71kc1nvwvfd"; depends=[MatchIt mice rlang survey WeightIt]; }; Matching = derive2 { name="Matching"; version="4.9-9"; sha256="0j4s8drvc0mpxrah4h1whdilbf58y24mjxs45lyb5q7i91rp74lw"; depends=[MASS]; }; - Matrix = derive2 { name="Matrix"; version="1.3-3"; sha256="0fvayd6b8w6yzhil85xw7lib68dvxyzpcznwvwczlyxf8ggchzpp"; depends=[lattice]; }; + Matrix = derive2 { name="Matrix"; version="1.3-4"; sha256="0fbcbysp3vaivmp1yasmp8mdsldhr826vfs4vyxrjpjl8jfifhmb"; depends=[lattice]; }; Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.8"; sha256="0a5fq1scykqk0kc9j051j6fix6j2dqwz5wbgb0amaxsiywz9vigb"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.5"; sha256="192pmfm8csvs2lf2hxpsj542lrd8b74rg4wzmz3s3m9i98pd0h4d"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.3"; sha256="10r6h5bidj44kfbwiml9pkysbikqphfb21ig61qnx0qa12xcl6l8"; depends=[]; }; + MatrixExtra = derive2 { name="MatrixExtra"; version="0.1.6"; sha256="19c2rzh6gap3mi5vi1djd9jkd93fdhxvp6ls153pfzr77yry3xsw"; depends=[float Matrix Rcpp RhpcBLASctl]; }; MatrixLDA = derive2 { name="MatrixLDA"; version="0.2"; sha256="0fixq35gp0fzmin75sfld2ln0zvnjgzrhk3b5yi7wdqzp99200yy"; depends=[glasso plyr Rcpp RcppArmadillo]; }; + MatrixMixtures = derive2 { name="MatrixMixtures"; version="1.0.0"; sha256="0l9f7sicigp88rqi2bn4bmlrb130qvyikn4mlfphcpa16rvk37dq"; depends=[doSNOW foreach snow withr]; }; MatrixModels = derive2 { name="MatrixModels"; version="0.5-0"; sha256="1va6i6bpkq71rzl9i4xgyc5x7qcksa3nfzihlaggf6aj30dayzx8"; depends=[Matrix]; }; MaxMC = derive2 { name="MaxMC"; version="0.1.1"; sha256="0n6m5h8n3gwmlqq563rpdx4l8ldzl6jx3ga50ygvlnamdj3wjqgm"; depends=[GA GenSA NMOF pso scales]; }; MaxPro = derive2 { name="MaxPro"; version="4.1-2"; sha256="19a2wp93kx1wkbzd5bvljbm1rr96gr14w4fb0ppbgr2y2a4g8i1v"; depends=[nloptr]; }; MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; }; MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; }; - MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.4.6"; sha256="02qk8xlrvkpd36hx92yn1162ggfg6y0w6xxivw22wpzbq8mc7inn"; depends=[devtools dplyr futile_logger lubridate magrittr purrr rlang rvest stringr tibble xml2]; }; + MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.4.8"; sha256="000x5gwhg0avkg6ppkd5w7m6cvnkyd8p5jkcgz6i4b5dj3p9x752"; depends=[devtools dplyr futile_logger lubridate magrittr purrr rlang rvest stringr tibble xml2]; }; MazamaLocationUtils = derive2 { name="MazamaLocationUtils"; version="0.1.13"; sha256="0ni48lng6m3lkn039c4542ldawqsbqfb0ag5m947i11q4anv9pi5"; depends=[digest dplyr geodist httr jsonlite lubridate magrittr MazamaCoreUtils MazamaSpatialUtils readr rlang stringr]; }; - MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.7.3"; sha256="1ckgsrjy1vxk4zf7p8fw25bb7hw59262pwfmk7414mv7xi4fij2g"; depends=[cleangeo countrycode dplyr magrittr MazamaCoreUtils rgdal rgeos rlang rmapshaper sp stringr tidyr]; }; + MazamaRollUtils = derive2 { name="MazamaRollUtils"; version="0.1.3"; sha256="1433xy64n3wpxg9d0jlwdfp8hlvmq0ndg3fv6kfxq3pasm600jgc"; depends=[Rcpp]; }; + MazamaSpatialPlots = derive2 { name="MazamaSpatialPlots"; version="0.1.2"; sha256="1gkxq6lnvdv24nvc34fmxz4qilzljxcls1lq29a5ag67dffz7kcj"; depends=[dplyr magrittr MazamaCoreUtils MazamaSpatialUtils rlang sf sp tmap]; }; + MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.7.6"; sha256="07qr6cwa29brsp567vjhfv8pkqijxhhz98bxvagrpjj5gbx1179s"; depends=[cleangeo countrycode dplyr magrittr MazamaCoreUtils rgdal rgeos rlang rmapshaper sp stringr]; }; Mcomp = derive2 { name="Mcomp"; version="2.8"; sha256="1wz5fr3dhxn4s0qvxm2mzq9dbz3x0vgh6pixjrgk9d4i9w2p7s60"; depends=[forecast ggplot2]; }; MeTo = derive2 { name="MeTo"; version="0.1.0"; sha256="14hdyh3p3q8yb9w2li2y9pc356jnymsn6n2750zdsrh52b751lpm"; depends=[lubridate]; }; MedDietCalc = derive2 { name="MedDietCalc"; version="0.1.1"; sha256="11q1yn6l697qa33wqik9y9lji39r6pph109yxkkprg9p80c187xy"; depends=[]; }; @@ -2807,13 +2909,15 @@ in with self; { MedSurvey = derive2 { name="MedSurvey"; version="1.1.1.3.0"; sha256="11lkli2arl5w2aizzd93fb6xsy30000nf3qc08qirrm07rwypaly"; depends=[lavaan Matrix survey]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; Mediana = derive2 { name="Mediana"; version="1.0.8"; sha256="0j1ikc2iaxl70134v0gijj2i2g0xgjafvn8rc108r9fhm8rpw564"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; + MedianaDesigner = derive2 { name="MedianaDesigner"; version="0.3"; sha256="0kgvd1jxxxg7w6qg5c6640f07r4z3wy18k5xy2apk4d2h12762kg"; depends=[devEMF flextable mvtnorm officer Rcpp RcppEigen RcppNumerical shiny shinydashboard shinyMatrix]; }; MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.5.1"; sha256="1qi5v4m19025zcigl6wxmj3vi6zjlzgsm6cj75kywq2qabrzk2fw"; depends=[ggplot2 glmnet iterpc knitr Matrix plotly quantreg rjson rmarkdown robustbase]; }; - Mercator = derive2 { name="Mercator"; version="1.0.0"; sha256="15nps7yis3l3479spd407xlza4rl1lp5ya7cakv38c93848a89dh"; depends=[ClassDiscovery cluster dendextend flexmix igraph KernSmooth Polychrome Rtsne Thresher]; }; + Mercator = derive2 { name="Mercator"; version="1.1.1"; sha256="0jg5dm65smq67k35p8acqd5kdsv7py8plaamagbsc84617r0iaik"; depends=[ClassDiscovery cluster dendextend flexmix igraph KernSmooth kohonen Polychrome Rtsne Thresher umap]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; MetFns = derive2 { name="MetFns"; version="3.2.2"; sha256="15fd2d0yysibi2x43qv6b8i1pa18l7z4n0zpmrqhsmvqkgy8sla0"; depends=[astroFns lubridate plotrix pracma]; }; MetGen = derive2 { name="MetGen"; version="0.5"; sha256="00yzaicrpwfnxi5mdzwx1ai721vczkkf2yl50q9wwpxhmfx0xbbh"; depends=[chron glmnet MASS]; }; MetNorm = derive2 { name="MetNorm"; version="0.1"; sha256="0vfi3k0yp2dz47gwj1n1avs3ji0a2nlrrljz5d0l66zfh4474jb4"; depends=[]; }; MetProc = derive2 { name="MetProc"; version="1.0.1"; sha256="1z6538pij1rq5wv9s8rjcn0sck15y26asv4vamav8a6s4135ia3q"; depends=[fastcluster gplots]; }; + MetSizeR = derive2 { name="MetSizeR"; version="2.0.0"; sha256="0blfdcd8z6qbaz47q08arb94wh3cp689w7vsc3jvn3cqq7r35byl"; depends=[dplyr ggplot2 MetabolAnalyze Rfast shiny shinythemes vroom]; }; MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; }; MetaClean = derive2 { name="MetaClean"; version="1.0.0"; sha256="12vgdizggyz6wx08qf34jfhwgpzfrkgq63fvhfgi5gbf1nhma5zz"; depends=[BiocStyle caret fastAdaboost ggplot2 graph kernlab klaR knitr MLmetrics plotrix randomForest reshape2 Rgraphviz rpart xcms]; }; MetaComp = derive2 { name="MetaComp"; version="1.1.2"; sha256="1yb115qdmf5rxmjl4y7qr0i6668n46scs4yjpfq9bmy3w9i4ji1x"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; @@ -2824,13 +2928,14 @@ in with self; { MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.8"; sha256="1p182792vx1nix385kpgvdl0yff12xy5v1k6giaj0cxgfvhrqqar"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat_core spatstat_geom zipfR]; }; MetaLonDA = derive2 { name="MetaLonDA"; version="1.1.8"; sha256="0nalkmsii2anw07r16zcpgafb01l87hgpfr1mwc7nggvhdfp3w2g"; depends=[DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr pracma zoo]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; - MetaStan = derive2 { name="MetaStan"; version="0.2.0"; sha256="035qmzkijaql5d9h1a83p535gihy4bbv9n839q9kpp0l05mdwgwm"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; + MetaStan = derive2 { name="MetaStan"; version="0.4.0"; sha256="1qdb1y4hwkrhdyhjvig7vfybz0ixmm6w85yq0bmapxj10qs8ars9"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; MetaSubtract = derive2 { name="MetaSubtract"; version="1.60"; sha256="19xg95g2qgyi90pz3733l596gzdj6dmb0k9i4qmhaq4yck69rrhj"; depends=[]; }; MetaUtility = derive2 { name="MetaUtility"; version="2.1.1"; sha256="1v37rpycciwrcwzs69qqb4c8nk2wg3ilaimaqbbfzvl33h1hhqwd"; depends=[dplyr metafor purrr rlang stringr tidyr]; }; MetaboList = derive2 { name="MetaboList"; version="2.0"; sha256="10skvf14ls4qll0l9p6cig4lmj7138khcksyjvd1pqym9axk3wxn"; depends=[dplyr enviPick ggplot2 scales]; }; MetaboLouise = derive2 { name="MetaboLouise"; version="1.0.0"; sha256="1agcp520in0wpxv3x2jvvmv61hasazdymnvjhzl66nwv8lifl98z"; depends=[igraph]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3.1"; sha256="070qws759nczjrfdlh7jpbyjz4z3zm1hzb7vcvfgfks82wwb2ny0"; depends=[ellipse gplots gtools mclust mvtnorm]; }; + MetabolicSurv = derive2 { name="MetabolicSurv"; version="1.1.2"; sha256="1c8i3a3gnbvlkjh0vqmz1igzaf8q87cb55l3kijwi0z23ywrbqch"; depends=[dplyr ggplot2 glmnet matrixStats pls Rdpack rms superpc survival survminer tidyr]; }; MetabolomicsBasics = derive2 { name="MetabolomicsBasics"; version="1.2"; sha256="0gd93l9rm00x9g6ffppywpbccmhxgl4s4z4ba7al8lpjval9srzw"; depends=[C50 caret e1071 mixOmics pcaMethods plyr rlang ropls rpart]; }; MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; }; Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; }; @@ -2840,12 +2945,11 @@ in with self; { Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; Metrics = derive2 { name="Metrics"; version="0.1.4"; sha256="0fh8qbjlwzagh272lgwr4bxcqcjb1qpz53mgs8rzlvncax6nk5bk"; depends=[]; }; - MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.5.2"; sha256="17vcgixiappn7db2prd8aix6gg28zl4ncxvdp1cd8aypf320hq8h"; depends=[]; }; + MetricsWeighted = derive2 { name="MetricsWeighted"; version="0.5.3"; sha256="0wi83gk3rrvfkl48x0sml3k0bazsm6ycb4kdk3y1kp83pxdls43p"; depends=[]; }; MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; MiDA = derive2 { name="MiDA"; version="0.1.2"; sha256="144gxsxqljzskxsw5k0y69ix0pxlfvyyznxkjpf2ng4l47pg11z5"; depends=[caret gbm genefilter limma preprocessCore pROC SQN]; }; - MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; - MiRKAT = derive2 { name="MiRKAT"; version="1.1.2"; sha256="0r73ckbmva3zbsvqyak5c1wkchl7i34jx6rq8x32pw87xhv1zc5h"; depends=[CompQuadForm GUniFrac lme4 MASS Matrix mixtools PearsonDS permute quantreg survival]; }; - MiRNAQCD = derive2 { name="MiRNAQCD"; version="1.1.1"; sha256="06sqqkyxlz3axq4nb9xwa2049fd6jkl5yiqv3wll8aw3m8q8jdix"; depends=[ggplot2 pROC]; }; + MiRKAT = derive2 { name="MiRKAT"; version="1.2.1"; sha256="1ypxs6p8jzd2y5rxbfrr2z1xib6im9i58wvcz4cqcgpw298w7ard"; depends=[CompQuadForm GUniFrac lme4 MASS Matrix mixtools PearsonDS permute quantreg survival]; }; + MiRNAQCD = derive2 { name="MiRNAQCD"; version="1.1.2"; sha256="1alpa7xsk669rsh0s7kjdnk1ymlfm81rw011pk29fi7p2jc505iv"; depends=[ggplot2 pROC]; }; MiRSEA = derive2 { name="MiRSEA"; version="1.1"; sha256="0jpl6ws5yx1qjzdnip9a37nmvx81az4cbsjm57x613qjpwmg6by3"; depends=[]; }; MiSPU = derive2 { name="MiSPU"; version="1.0"; sha256="1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply"; depends=[ape aSPU cluster Rcpp RcppArmadillo vegan]; }; MiST = derive2 { name="MiST"; version="1.0"; sha256="0gqln792gixqfh201xciaygmxbafa0wyv5gpbg9w5zkbbv44wrfk"; depends=[CompQuadForm]; }; @@ -2854,16 +2958,16 @@ in with self; { MicroMacroMultilevel = derive2 { name="MicroMacroMultilevel"; version="0.4.0"; sha256="1q5cyqr4hdl1wp2isk6p4p084i83kg6hd406wdp1nj9lv5i0xvgw"; depends=[]; }; MicroNiche = derive2 { name="MicroNiche"; version="1.0.0"; sha256="166ci4crkwnnh05rhs5hyrljgm4cdf7gp0ff8kjxjmd60byw80mz"; depends=[ggplot2 reshape2]; }; MicroSEC = derive2 { name="MicroSEC"; version="1.1.3"; sha256="1imdxm15f792xw5kc9lhry5jsw739j6y3f2fs64abj22hqxfwypi"; depends=[BiocGenerics Biostrings data_table dplyr GenomeInfoDb GenomicAlignments gtools magrittr openxlsx R_utils Rsamtools stringr tidyr]; }; - Microsoft365R = derive2 { name="Microsoft365R"; version="2.1.0"; sha256="01rn59lcrr1bjd6cmd344wn7z1h18m3h4918clv6fy28gs5qvgq1"; depends=[AzureAuth AzureGraph curl httr jsonlite mime R6 vctrs]; }; + Microsoft365R = derive2 { name="Microsoft365R"; version="2.3.1"; sha256="1vwhrfrqms0l7vprzbchwkfsijzdpirvvaxv018hlm7qh92yf4rx"; depends=[AzureAuth AzureGraph curl httr jsonlite mime R6 vctrs]; }; MinBAR = derive2 { name="MinBAR"; version="1.1.2"; sha256="099afazil0gfs5yq92clc7ahis5azyvlql4zs7fhp82v9m6b80qj"; depends=[dismo ecospat geosphere lattice latticeExtra maxnet raster rgdal sp]; }; MinEDfind = derive2 { name="MinEDfind"; version="0.1.3"; sha256="1y0iv92mp7hf14vrj54qd0yvmjrv52jv3vg25kc5q7pml63njkqa"; depends=[ggplot2 gridExtra Iso]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; Minirand = derive2 { name="Minirand"; version="0.1.3"; sha256="19lib0qh3xfzvpgsskl3yypmjygss0w7pimz0136av0px5b4jran"; depends=[]; }; - MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; - MittagLeffleR = derive2 { name="MittagLeffleR"; version="0.3.0"; sha256="0lp3jazmcg90gp019djr4xx8zwxrrmjidp53rc2v7s122razn9lr"; depends=[stabledist]; }; + MisRepARMA = derive2 { name="MisRepARMA"; version="0.0.2"; sha256="0bay8grq49yin9yy9h9ynb8flsbrb10h4lp7sdzp9ih5b9w21y7z"; depends=[boot mixtools tseries]; }; + MittagLeffleR = derive2 { name="MittagLeffleR"; version="0.4.1"; sha256="1qlz418im27v7q3xk09a2w3zdx7ky5imcyi3kpg1s3bz5zx57p2f"; depends=[stabledist]; }; MixAll = derive2 { name="MixAll"; version="1.5.1"; sha256="1jsh29ygy1n7lbz93ks725li9hnvfa0kp1qik13m72nmgw7g7q5a"; depends=[Rcpp rtkore]; }; - MixGHD = derive2 { name="MixGHD"; version="2.3.4"; sha256="06h4sa5ws2ng87c9sqc0fl9psmk78gy2lxbxvspab1v1i636dq3j"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; + MixGHD = derive2 { name="MixGHD"; version="2.3.5"; sha256="0c6ildimfpvq688ivvr85knjy2z5azz46qq9ghj92iqhbib7df6r"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; }; MixMatrix = derive2 { name="MixMatrix"; version="0.2.4"; sha256="1bmd99p98brp8nzqhf442py2hmdj2vnzn15qwhrdskh6i0gzaqc4"; depends=[CholWishart Rcpp RcppArmadillo]; }; MixOptim = derive2 { name="MixOptim"; version="0.1.2"; sha256="14blyb1dqbdb14rby4nrggpqdx6b43lbb2xwi3059biq9mrj3a2x"; depends=[desirability ggplot2 patchwork rlang]; }; @@ -2872,22 +2976,24 @@ in with self; { MixSIAR = derive2 { name="MixSIAR"; version="3.1.12"; sha256="07wiv7x2c9mhqk37zndxvdb76m9shizc48qz2bp2f4g5z9hciid7"; depends=[bayesplot coda ggmcmc ggplot2 lattice loo MASS MCMCpack R2jags RColorBrewer reshape reshape2 splancs]; }; MixSim = derive2 { name="MixSim"; version="1.1-4"; sha256="0nwgp2pmyza3l77y6div9fkdw6w3m8dbl28crv9yhdc9rpw1xlfp"; depends=[MASS]; }; MixTwice = derive2 { name="MixTwice"; version="1.1"; sha256="1vzy31aaxyfr28xsk9358laqg429lnrkxdmm63maz15wcbxha9zq"; depends=[alabama ashr fdrtool]; }; + MixedIndTests = derive2 { name="MixedIndTests"; version="0.1.4"; sha256="1kbzq9bg70alxnkr9id5l5h8p510lcjk5layh56hh17gbagr62na"; depends=[doParallel foreach ggplot2 survey]; }; MixedPoisson = derive2 { name="MixedPoisson"; version="2.0"; sha256="0g5mpzj0wda6g46q3cg5mm3x4dvpz9gdclzn2m17l62lzny2i10p"; depends=[gaussquad MASS Rmpfr]; }; MixedPsy = derive2 { name="MixedPsy"; version="1.0.0"; sha256="19cgw82jdkcpkca90bab1k5gcb2prlxm634n4m7yx0p0mj736fha"; depends=[beepr boot brglm lme4 Matrix mnormt]; }; MixedTS = derive2 { name="MixedTS"; version="1.0.4"; sha256="0gwcg115idbcm5llgzqsygvqgshq8dywawxkaddsmw4sbbhj4555"; depends=[MASS]; }; MixfMRI = derive2 { name="MixfMRI"; version="0.1-1"; sha256="0nqsvfr28m510gqwcv0s2b94k42m7m6s7ffsjxn6kxikh5p3y6gz"; depends=[EMCluster fftw MASS Matrix MixSim RColorBrewer]; }; MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; }; MixtureRegLTIC = derive2 { name="MixtureRegLTIC"; version="1.0.0"; sha256="052gyk4gqv49fa2rxbxnib29f1vjxiw4q8llkfhsv8kw5pw38699"; depends=[]; }; - MoBPS = derive2 { name="MoBPS"; version="1.4.87"; sha256="0wzmb02d9b49jrz8a4z28yri2zd8dh016an46h2dkmykr1asxg95"; depends=[]; }; - MoEClust = derive2 { name="MoEClust"; version="1.3.3"; sha256="0hi2ilh1ripjlf6kqajphzjywhy8shahvfhv7c2hngms8lw5ggs9"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; + MoEClust = derive2 { name="MoEClust"; version="1.4.0"; sha256="1ag6a3ivn31jiw74f03pv2vasfx9pkg3c8qzf1iqg3g7y0v36a4k"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; }; MoMPCA = derive2 { name="MoMPCA"; version="1.0.1"; sha256="1snixlq35xbzf005d877i493sf1wm48jqlq9515yl1s6lxmav1n7"; depends=[doParallel dplyr foreach magrittr Matrix slam tm topicmodels]; }; MoTBFs = derive2 { name="MoTBFs"; version="1.4"; sha256="1b69wzsy0wnzgbk04x363wb1dfnxz610sn8d28cn2akvf7n8na70"; depends=[bnlearn ggm lpSolve Matrix quadprog]; }; MobileTrigger = derive2 { name="MobileTrigger"; version="0.0.31"; sha256="1zbnxdxh6gr4sgpi10i0pnd85f7i842105jgjswacziqamby6mcy"; depends=[caret ggplot2 kableExtra knitr mailR plyr XML yaml]; }; ModStatR = derive2 { name="ModStatR"; version="1.3.1"; sha256="16mfggplpmjz2kspfa99q4gbm4avm306d83n8hiki382094li1ni"; depends=[boot ellipse gsl hypergeo jmuOutlier]; }; + ModTools = derive2 { name="ModTools"; version="0.9.4"; sha256="111rhdw917rynwsh6l6nsma5pjyi3ix9gjy5fx620d6ywcq7b227"; depends=[AER C50 car class DescTools e1071 lattice lmtest MASS naivebayes NeuralNetTools nnet pROC pscl randomForest relaimpo robustbase rpart rpart_plot sandwich survival]; }; Modalclust = derive2 { name="Modalclust"; version="0.7"; sha256="0ymzdxp6rh6baih1xm6kj8l8jxjclvnmq0gfp38cl8lpskspb26x"; depends=[class mvtnorm zoo]; }; ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; ModelMap = derive2 { name="ModelMap"; version="3.4.0.1"; sha256="1279k5hznxrb6fq4zd1baw1pm5dj5437g5awkgb8kp7ll8raa2ql"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; + ModelMatrixModel = derive2 { name="ModelMatrixModel"; version="0.1.0"; sha256="0w8j32b2yw7x8lr1a9bgs4ylxfsxw8m06q7xpgsiz6sjicspc714"; depends=[Matrix]; }; ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2.2"; sha256="0mrlsw4c5y1vdsqynxr2dcvmhh5h37pnd71jw5a5djpbda9g21jy"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.5"; sha256="15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; @@ -2903,13 +3009,13 @@ in with self; { Monte_Carlo_se = derive2 { name="Monte.Carlo.se"; version="0.1.0"; sha256="1d5gp4wvpvrlp82g8k8v668mzhmdlk2pvky34v7hxysap9xgmsqr"; depends=[]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.6"; sha256="1jwq3by8zfy6sbzahcj5l0vicqn7yyqpb7xhfsaymfspm7xyq6pj"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; MonteCarloSEM = derive2 { name="MonteCarloSEM"; version="0.0.2"; sha256="01vxldhf8v40s4h0ry6a2hgvr74mf5qdnijd22cz7rivr30ldf4h"; depends=[lavaan Matrix]; }; - Morpho = derive2 { name="Morpho"; version="2.8"; sha256="080ix1j0r67l0y66zq4xzfl8lhd3q4y4hzmmxphxkhmx83rhsik0"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; + Morpho = derive2 { name="Morpho"; version="2.9"; sha256="1gsns3ab9x24czl53p15cja9vw881iwnhc0ix50i8vzkx184wsib"; depends=[bezier colorRamps doParallel foreach jsonlite MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; - MortCast = derive2 { name="MortCast"; version="2.3-0"; sha256="0jdfmwz2yd81dz8ks9f79wz5az6j59skvf3cp1rv2122bg5wl7n2"; depends=[wpp2017]; }; + MortCast = derive2 { name="MortCast"; version="2.4-0"; sha256="1y2lwg12n38lmb3cp8k9z0h3q1s63kq534fvsax9n1hyk8ran39i"; depends=[wpp2017]; }; MortalityGaps = derive2 { name="MortalityGaps"; version="1.0.0"; sha256="0nfm8xa7gnshrl8hsvmvr3za8nbppp7f7i5h4ni204w7xwvh8jxc"; depends=[crch forecast MASS pbapply]; }; MortalityLaws = derive2 { name="MortalityLaws"; version="1.8.5"; sha256="1kkf2blrv68s7rjcmcq6nbaxlizxqnrsy69cqk077ga0arlzjq1i"; depends=[minpack_lm pbapply RCurl tidyr]; }; - MortalityTables = derive2 { name="MortalityTables"; version="2.0.2"; sha256="1i2qgk772qyp9mcsrrv7cjwr6afw0fjid26073c1gi1rssifhvib"; depends=[ggplot2 pracma scales]; }; - MplusAutomation = derive2 { name="MplusAutomation"; version="0.8"; sha256="08k8c4h17k21g9gxj2hwg59dyny7j80kjk7086rgwq9lhqf022y9"; depends=[boot coda data_table digest ggplot2 gsubfn lattice pander plyr rlang texreg xtable]; }; + MortalityTables = derive2 { name="MortalityTables"; version="2.0.3"; sha256="0ldj8gq5xpbxkjcvdysrcq7a0xv7caz1rc8v6bpn5hkr866lqnmw"; depends=[ggplot2 pracma scales]; }; + MplusAutomation = derive2 { name="MplusAutomation"; version="1.0.0"; sha256="0hkz76gmmz1cpsjmz7jscwvdc8aar1g9468b5cr21zyl5slna0cg"; depends=[boot checkmate coda data_table digest fastDummies ggplot2 gsubfn lattice pander plyr rlang texreg xtable]; }; MplusTrees = derive2 { name="MplusTrees"; version="0.1.1"; sha256="1s119p1fgr27rkh671zpzbfnd368m0s1607r8xwgjm0y5ncxwkv7"; depends=[MplusAutomation nlme rpart rpart_plot]; }; Mqrcm = derive2 { name="Mqrcm"; version="1.2"; sha256="1alfv76b90frimihjcq8whzqkwvhnnw2fd92nrfpnfj5dw0b56f5"; depends=[Hmisc pch]; }; MrSGUIDE = derive2 { name="MrSGUIDE"; version="0.1.2"; sha256="1hd0lvvy12r6kxa64vwnjavyv2f7a9jqgjxgmlw86wwh5g09hvfd"; depends=[BH magrittr Rcpp RcppArmadillo yaml]; }; @@ -2923,8 +3029,10 @@ in with self; { MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; MultBiplotR = derive2 { name="MultBiplotR"; version="1.3.30"; sha256="0cnn8m4yd2w0izbsvrlqgxif41554nq3hj7m169lxwxrb0csybcf"; depends=[car dae deldir dunn_test geometry GPArotation gplots Hmisc lattice MASS mirt mvtnorm optimr polycor rgl scales xtable]; }; MultEq = derive2 { name="MultEq"; version="2.3"; sha256="0fshv7i97q8j7vzkxrv6f20kpqr1kp9v6pbw50g86h37l0jghj7r"; depends=[]; }; - MultNonParam = derive2 { name="MultNonParam"; version="1.3.4"; sha256="06cdhm63d8drkx63q6wxq5kgny29ly5547apjaxj08b2dkmfrm4d"; depends=[ICSNP]; }; + MultIS = derive2 { name="MultIS"; version="0.6.2"; sha256="02ca1r8qfsl1b8rfawdn4xrlwhg5yab260rrsx8ckyv3v75knk8f"; depends=[cluster clv clValid dplyr foreach ggplot2 igraph ltm plyr poweRlaw RColorBrewer reshape2 rlang rmutil]; }; + MultNonParam = derive2 { name="MultNonParam"; version="1.3.5"; sha256="0ibda5gyvf43vmbhfdwi93xswmq4mg2ylfkwczlz05mgk0h7vfsv"; depends=[ICSNP]; }; MultOrdRS = derive2 { name="MultOrdRS"; version="0.1-2"; sha256="0bra4z37njkcgah3a1k6mxcnmxq85188jywhgx3fdb1wnv5ic549"; depends=[Rcpp RcppArmadillo statmod]; }; + MultSurvTests = derive2 { name="MultSurvTests"; version="0.2"; sha256="04crh4hbfhl8cr0faawv71lyabyilhxpg6i8sr9ki80982mbzcnd"; depends=[Rcpp RcppArmadillo Rdpack]; }; MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; MultiFit = derive2 { name="MultiFit"; version="1.0.1"; sha256="1hy2xsmdcsn4jwa06ffymhhd4prxjnqw0jxl77sxq8yb1fc2vk64"; depends=[data_table Rcpp RcppArmadillo]; }; @@ -2942,17 +3050,15 @@ in with self; { MultiSkew = derive2 { name="MultiSkew"; version="1.1.1"; sha256="1s0k3z1vgdz1cxad007p246ghwx282w06inhrjjscbwliz1vg5ib"; depends=[MaxSkew]; }; MultiVarMI = derive2 { name="MultiVarMI"; version="1.0"; sha256="1mlaprg3cfmfwrq7wh64fmyv1wpdnil7wpcrcg3921qydk65py6z"; depends=[BinOrdNonNor corpcor CorrToolBox Matrix moments norm PoisNonNor]; }; MultiVarSel = derive2 { name="MultiVarSel"; version="1.1.3"; sha256="18wcw80m5knv6hbzczjsx3lf7sn9n84z12zz844agp6234im163p"; depends=[glmnet Matrix]; }; - MultinomialCI = derive2 { name="MultinomialCI"; version="1.1"; sha256="0da7afpgb98wrcaif8y7396asp84gc244lq5l4959y6d5g199fhz"; depends=[]; }; + MultinomialCI = derive2 { name="MultinomialCI"; version="1.2"; sha256="0cd6yxszbxdgpvfkfx5d3w3f0157lxljpkwlnijb99i911rbyflp"; depends=[]; }; MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.2.0"; sha256="047a1pql3jf500gwlap6ws5z7mx0sqmdq6jbql24nl5iypi9jqpf"; depends=[foreach MASS]; }; MultiplierDEA = derive2 { name="MultiplierDEA"; version="0.1.18"; sha256="1d7cqa44yayyhwkl5wkp68b7vxakfnlwkprs811z8c2fmfm8vk5r"; depends=[lpSolveAPI]; }; - MultisiteMediation = derive2 { name="MultisiteMediation"; version="0.0.3"; sha256="00mjxy6qbhgpwfgkjb14al0pc8n4a9238cjgfikqcrd7agps0z1l"; depends=[ggplot2 lme4 MASS psych statmod]; }; + MultisiteMediation = derive2 { name="MultisiteMediation"; version="0.0.4"; sha256="0kkw6zxw29qmgd9nlgqjlyh99icxzkkqnpzzanxx8pn7m2ww0wkf"; depends=[ggplot2 lme4 MASS psych statmod]; }; + MultivariateAnalysis = derive2 { name="MultivariateAnalysis"; version="0.4.2"; sha256="1kphv0b1kcaha0rrfqvyblkr49fc5gys50janb28nmmnlkvrydbs"; depends=[ape biotools candisc corrplot crayon PCAmixdata]; }; MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.1.5"; sha256="0mww4x1hqraiyvmw2f9s6h180kplmj36hb7zfg7xlkmgdf4apk8d"; depends=[bootstrap Rcpp]; }; MultiwayRegression = derive2 { name="MultiwayRegression"; version="1.2"; sha256="1w0yd3nwrqpk5nhnrcrd06fbdhg4kizx2p8mpspqnw8qcn970pfl"; depends=[MASS]; }; MvBinary = derive2 { name="MvBinary"; version="1.1"; sha256="1lrrxvphxv4gmlazx67q4bck9373nqylqgkwcjzwb52291a3zyiv"; depends=[mgcv]; }; My_stepwise = derive2 { name="My.stepwise"; version="0.1.0"; sha256="10wka6kzk8krwdsyjfnn78dfqflq4zg3vjkk0i2ywjm5vap6aqa5"; depends=[car lmtest survival]; }; - Myrrix = derive2 { name="Myrrix"; version="1.2"; sha256="05x2h4ppjhfm0wlpwyp8ycjg59qj3gv0yqdilxrzb1lkrzln92xb"; depends=[Myrrixjars rJava]; }; - Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; }; - N2H4 = derive2 { name="N2H4"; version="0.5.7"; sha256="0wpwcv17jvrjgvr0qhjrjr1i2rdxcga49c1c6m7s58p9wmdi8fg2"; depends=[dplyr httr jsonlite lubridate rvest tibble tidyr xml2]; }; N2R = derive2 { name="N2R"; version="0.1.1"; sha256="1wjz145d5v1ml2zyvw2znvv550sn6cm7c3rdshg450f7c4j7qyp8"; depends=[Matrix Rcpp RcppEigen RcppSpdlog]; }; NACHO = derive2 { name="NACHO"; version="1.1.0"; sha256="0ji9kcfbnsrn6h4p0y0ly5nwyfwh3y01wm80a7syg4mjj0nd4z0g"; depends=[cli crayon dplyr ggbeeswarm ggforce ggplot2 ggrepel knitr magrittr purrr rlang rmarkdown rstudioapi scales sessioninfo shiny shinyWidgets tibble tidyr]; }; NADA = derive2 { name="NADA"; version="1.6-1.1"; sha256="0jp4mqr77cx7q5lff84s6wb0dwjy9mi0jyhbjc5fsx50bdczc3v7"; depends=[survival]; }; @@ -2979,26 +3085,30 @@ in with self; { NCmisc = derive2 { name="NCmisc"; version="1.1.6"; sha256="0ycc7b7z26a922hdjq8p4hjljjh09il24h3023k248pcsnbmka1a"; depends=[proftools]; }; NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; NDP = derive2 { name="NDP"; version="0.1.0"; sha256="0wmld7g4w3d7d8lyj4132h3jpr8ng8kpy4ssqjp8r0lqwif2i86b"; depends=[rmarkdown shiny]; }; - NEONiso = derive2 { name="NEONiso"; version="0.4.0"; sha256="05azg9nh3mpfm490m3x7bv57h2zh3wa2k2cjdcfz1m6bjh6gs4fs"; depends=[data_table downloader dplyr httr jsonlite lubridate magrittr neonUtilities R_utils rhdf5 rlang tidyselect zoo]; }; + NEONiso = derive2 { name="NEONiso"; version="0.5.1"; sha256="1sb74ilj5vwrs5fm4lfba19vgls33af8lfqc2jdl7rs1ijpvki7v"; depends=[data_table dplyr httr lifecycle lubridate magrittr neonUtilities R_utils rhdf5 rlang tidyselect zoo]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; - NFCP = derive2 { name="NFCP"; version="1.0.0"; sha256="0mirpfywydqg6p664vndz9i6m2igwwyshg0whs7cwcg1bmwnci5v"; depends=[curl FKF_SP LSMRealOptions MASS mathjaxr numDeriv Rdpack rgenoud]; }; + NFCP = derive2 { name="NFCP"; version="1.2.0"; sha256="1dav6h0bk4c787g5wskpsfqdbsgalq0xpbzq6nk1sg54g6wd76q2"; depends=[curl FKF_SP LSMRealOptions MASS mathjaxr numDeriv Rdpack rgenoud]; }; NFLSimulatoR = derive2 { name="NFLSimulatoR"; version="0.3.0"; sha256="0gmr47pzyys3d4kmmbxznhs3vsi83vb6xv16bhg0zljkdp80fp44"; depends=[data_table progress]; }; NFP = derive2 { name="NFP"; version="0.99.4"; sha256="1ybkkqdwq72inwyak5d2598xizfph5sg3zzb855l0kpxplcqnp2f"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; NFWdist = derive2 { name="NFWdist"; version="0.1.0"; sha256="0833lg0pd763awrc6ibidwf2ldl79w9lmm5acq4bnpd2hzsx60l8"; depends=[]; }; NGBVS = derive2 { name="NGBVS"; version="0.2.0"; sha256="1k7m7wy54irqci6ccclpylbmz0613ha7r531cji99jb7nkpzl6l0"; depends=[Rfast]; }; - NGSSEML = derive2 { name="NGSSEML"; version="2.1"; sha256="0fjpq1nqqh4wbi2xzybz07x48d1nmwm25n93gj7znf7dm8qanxqs"; depends=[car dlm fields interp mvtnorm]; }; + NGLVieweR = derive2 { name="NGLVieweR"; version="1.3.1"; sha256="15azdlr3a6gaacjcjpi61rwmx7c3idfn3w1zpgbaqmhxd9a4m6f0"; depends=[htmlwidgets magrittr shiny]; }; + NGSSEML = derive2 { name="NGSSEML"; version="2.2"; sha256="1jyjjhxq2kmm8hbsp3b27vxyin7j32056wi06gz5s02rmrhld97h"; depends=[car dlm fields interp mvtnorm]; }; NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; }; NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; }; NHMM = derive2 { name="NHMM"; version="3.11"; sha256="1ynxk4dpllb3w8229dmxzjdmf0zh5cgmh3wa55d02disc6yhm77k"; depends=[BayesLogit MASS MCMCpack msm Rcpp]; }; NHMSAR = derive2 { name="NHMSAR"; version="1.17"; sha256="149zzk8apl4zv60xagl8zk3zv1fnrbfijmlwn8c4vypvlfdsr981"; depends=[glasso lars ncvreg ucminf]; }; NHPoisson = derive2 { name="NHPoisson"; version="3.3"; sha256="1i6n59ckcxk1hwyz97jmnv4yb96ianjma6ka8lpz79ivs41jniad"; depends=[car]; }; + NHSDataDictionaRy = derive2 { name="NHSDataDictionaRy"; version="1.2.5"; sha256="17jvyjxc28bmxadvcjhal4shklh24636zw6hrc7p7m71lbcw86aw"; depends=[dplyr httr magrittr purrr rvest stringr tibble xml2]; }; NHSRdatasets = derive2 { name="NHSRdatasets"; version="0.3.0"; sha256="1l4zrprnb3fsb2mibq8749a15xbvhn1g5yajbjf7gls81c8f2r7p"; depends=[tibble]; }; + NIMAA = derive2 { name="NIMAA"; version="0.1.0"; sha256="0qi99iwvr8362zm4lxq6vbw5l47r5246zvsa9p1y3ragc7s1qahc"; depends=[bipartite bnstruct crayon dplyr fpc ggplot2 igraph mice missMDA networkD3 plotly purrr RColorBrewer scales skimr softImpute tibble tidyr tidytext visNetwork]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; NIRStat = derive2 { name="NIRStat"; version="1.1"; sha256="07l4ca7d9q840iy5a80sqafrlv20534jw65wzxs90j2d0jx4acs9"; depends=[ggplot2 gridExtra mgcv]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; NITPicker = derive2 { name="NITPicker"; version="1.0.1"; sha256="00jmin7y1bp7a4a1qcvv3rkgiy9qij7gbkxcdgpiyzcs6aaif59z"; depends=[fda fda_usc fdasrvf]; }; + NLMR = derive2 { name="NLMR"; version="1.1"; sha256="1m08nm71wbam6d8nj8akwqrm6nq5bvm3v76kdlasdgs7v36xzri6"; depends=[checkmate dplyr fasterize igraph RandomFields raster Rcpp sf spatstat_core spatstat_geom tibble]; }; NLP = derive2 { name="NLP"; version="0.2-1"; sha256="1dpj04fmld2lnhg072ahgjbhmciqqy9h1lrz0wf32mr7mm9s9sh5"; depends=[]; }; NLPclient = derive2 { name="NLPclient"; version="1.0"; sha256="0jhlz9mqziyk5574vl8qjjs4g75x27rlk90wvzm3q9kjrjyvad35"; depends=[curl NLP xml2]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-5"; sha256="1jxxly85iajzb9qckkkar0przyxv005cyvry0qi5dkzhbyl5k490"; depends=[NLP qdap SnowballC]; }; @@ -3010,37 +3120,40 @@ in with self; { NMI = derive2 { name="NMI"; version="2.0"; sha256="1rxphy9rhy9zhdiz48dvl9m26x6k681lnyn39lqxs0a6jhrxg7y3"; depends=[]; }; NMOF = derive2 { name="NMOF"; version="2.4-1"; sha256="0jnzmzwscrxhnlgzwrcq69wx9viwidbysxjyxa93n0hn9abrp1ip"; depends=[]; }; NMVANOVA = derive2 { name="NMVANOVA"; version="1.1.0"; sha256="1jlqyg5vn7j8srvifjghd5a7820kadl8kbwib4qxalrfprq81h8p"; depends=[]; }; + NMdata = derive2 { name="NMdata"; version="0.0.9"; sha256="0ldab8brzhxpjgswh9fgla9xb2k703vf8syd5im3ixjz6ngmkn2m"; depends=[data_table]; }; + NMproject = derive2 { name="NMproject"; version="0.6.5"; sha256="1hkiakazqn5hsmifr7lic8dlm9wvs2gbyfnxxxc4qmbfy2di07cz"; depends=[crayon diffobj dplyr DT dygraphs git2r htmltools lifecycle magrittr miniUI reshape2 rlang rmarkdown rprojroot rstudioapi shiny stringr tidyr usethis]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.1"; sha256="1w2i4xlx249p589yqdgbx1ra406ycxw729vbk1lqadbn71m6blaz"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.6.3.2"; sha256="18qy02lpjhwmg5pj1yxj8dx468vi99cgy86rvr55yan5jz2rz7yq"; depends=[caret data_table doParallel dtw dynlm meboot plyr Rfast rgl stringr tdigest]; }; + NNS = derive2 { name="NNS"; version="0.8.1"; sha256="0k773wpf24y9i7v6jsjb80zx2bharipsn8pc3rcym0brqvda1cjw"; depends=[caret data_table doParallel dtw dynlm meboot Quandl Rfast rgl stringr tdigest zoo]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; - NNbenchmark = derive2 { name="NNbenchmark"; version="3.1.9"; sha256="1aj9fnk6x8qn998szbn2wlimzs9fixf0pwbivhyz69xipljzcsmm"; depends=[pkgload R6]; }; + NNbenchmark = derive2 { name="NNbenchmark"; version="3.2.0"; sha256="086smk3xy6p6ianw41h3gx806q7h28v1dg9d3khsrwyyf9gn8xyp"; depends=[pkgload R6]; }; + NO_PING_PONG = derive2 { name="NO.PING.PONG"; version="0.1.4"; sha256="10q5h9kafni3wlnn1gdsgd9a90km5snrjz1nr0ilafmdvw9vg6v1"; depends=[MASS MCMCglmm metafor]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; - NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.3"; sha256="19y98gj0ww13kddimzm0kfkpz6lxv7libwi6j34z3cy9jn7zrncw"; depends=[dplyr ggplot2 Rcpp reshape2 rlang tidyverse]; }; + NPBayesImputeCat = derive2 { name="NPBayesImputeCat"; version="0.4"; sha256="0g4xamc6vm5xcbvjrz77msglas81pzw6pi8ikfv8j4j03i5xa7mj"; depends=[bayesplot dplyr ggplot2 Rcpp reshape2 rlang]; }; NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; NPCD = derive2 { name="NPCD"; version="1.0-11"; sha256="107i33z4q5w2828sm0pm8234kmp1v3a2w72lmhvi0rpnjhg0x120"; depends=[BB R_methodsS3]; }; - NPCirc = derive2 { name="NPCirc"; version="2.0.1"; sha256="1pyckjvf4vzns9hxnhnk7cm4abllmdj3f142pvjhnilyqwndqgyc"; depends=[circular misc3d movMF plotrix rgl shape]; }; + NPCirc = derive2 { name="NPCirc"; version="3.0.1"; sha256="0hljqfyrb8r76f6lkjn0jgr15wnyqv3pc3bv23bdw0hxq574aiwc"; depends=[circular misc3d movMF plotrix rgl shape]; }; NPHMC = derive2 { name="NPHMC"; version="2.2"; sha256="000x9y00gfkaj5lf00a55b9qx15x05yp3g3nmp8slyzsnfv66p5d"; depends=[smcure survival]; }; NPHazardRate = derive2 { name="NPHazardRate"; version="0.1"; sha256="0na4iphva1dadz457ii8kxrhnki2asaxpbwr824rljyrldj9rcgg"; depends=[survival]; }; NPIstats = derive2 { name="NPIstats"; version="0.1.0"; sha256="0hbx2mzz1z2158c943dqfn0pq1aybj1xxy55mmvld4djr5zrlz9w"; depends=[dplyr]; }; - NPMLENCC = derive2 { name="NPMLENCC"; version="1.0"; sha256="1l11vczs7ijfpqv7i7j8c5sxyfcbipqx00lf75i2c0kf21njv1vx"; depends=[MASS survival]; }; NPMLEcmprsk = derive2 { name="NPMLEcmprsk"; version="3.0"; sha256="0nm88fsxgrfk0j0lmir57bhxy4p8ah503gpj6jdlvjqw862jigiq"; depends=[]; }; NPMLEmix = derive2 { name="NPMLEmix"; version="1.2"; sha256="056jb3kz34lajryfbzkhq0g372iib6h8mr74mq18xkarp5blgmsl"; depends=[CAMAN dplyr FDRreg Hmisc latexpdf Matrix mosaic pbapply pracma progress R_utils Rcpp REBayes Rmosek spatstat]; }; NPMVCP = derive2 { name="NPMVCP"; version="1.1"; sha256="13jpm46abwziq8859jhl6hg1znk3ws1q7g4vlr2jyri3qa6h22dd"; depends=[]; }; NPP = derive2 { name="NPP"; version="0.4.0"; sha256="1891s5j39i728vqs6xz1bywnvgalsbiknn3yqsg71zlhj3h8ikll"; depends=[]; }; + NPRED = derive2 { name="NPRED"; version="1.0.5"; sha256="0klzca0j9hswr586bp27r67s09n548yvgclfs5b64qdlhng7sf13"; depends=[]; }; NPS = derive2 { name="NPS"; version="1.1"; sha256="02idja149a2sj97sks4lhsaflpifyxi6n0rjlcq9993f84szfgsi"; depends=[]; }; NPflow = derive2 { name="NPflow"; version="0.13.3"; sha256="1bgdkm82pmzjv46pkxpvh5ffffmc6q68x5jjl7k330w9vwgx2kf0"; depends=[ellipse fastcluster ggplot2 pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; NRejections = derive2 { name="NRejections"; version="1.2.0"; sha256="0lzj7kyn4s8l306a6xwkgkv1z4dlfsr61i902lvdxv4ln4m6a5kq"; depends=[doParallel foreach matrixcalc mvtnorm StepwiseTest]; }; + NSAE = derive2 { name="NSAE"; version="0.1.1"; sha256="154jkajbs2l2yl4bbcrzn473i45hm3yr7nzb49hx084pn6h5lqsa"; depends=[rlist]; }; NSM3 = derive2 { name="NSM3"; version="1.16"; sha256="18wihr8qzdkyd6pwxq8yz2wrj0nh1sh713nflv4jiiczg6d965b8"; depends=[agricolae ash binom BSDA coin combinat fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; - NSO1212 = derive2 { name="NSO1212"; version="1.2.0"; sha256="0xc1hc0bjgr8f6qwh6l9184d5indvkyilc0fhb2lizhi9m0j2jx7"; depends=[httr jsonlite]; }; + NSO1212 = derive2 { name="NSO1212"; version="1.3.0"; sha256="0dk15rvk2zhwk3kmis5qj68k44njqyvm5brcgwmi6hhgpv9h8mri"; depends=[httr jsonlite]; }; NST = derive2 { name="NST"; version="3.0.6"; sha256="02frl4vpdw14gkgx7g0pi7zl342pkmszh48ggsf3b3qchsj5i1iz"; depends=[ape bigmemory iCAMP permute vegan]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; - NScluster = derive2 { name="NScluster"; version="1.3.4"; sha256="1bkzmm573ic6xrsqbbln865rfw2xnmby632m3jcgamddxppx3fjf"; depends=[]; }; + NScluster = derive2 { name="NScluster"; version="1.3.5"; sha256="1z078aixk2f6xxnwz7gbdwfgviha3bv8sfvpz7g56v9v3c1g6bgy"; depends=[]; }; NTS = derive2 { name="NTS"; version="1.1.2"; sha256="02gh9yqflwgqws7a14wwb1y7qx0whw4ss1kkfgh9jp6bxc2dclnf"; depends=[dlm MASS MSwM Rdpack tensor]; }; NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.2"; sha256="0s6gm3adc9qdh94pxzgccbxx1f1lbgqyvd4xk37xp6f3b5hwljdz"; depends=[snowfall]; }; NVCSSL = derive2 { name="NVCSSL"; version="1.0"; sha256="00dpi0b0zm5cfkyb2z8wfkw6xcax2kkplm9rzkvfjz7fchlmkx5r"; depends=[grpreg Matrix plyr]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.6"; sha256="0cs65hs6fbkxv8pc2m4394c68nqbahjcryjnhhrhg50wam3y03lq"; depends=[]; }; - NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1.1"; sha256="1c2w129mz0linnc959h11zyhm8kyfmifwnbyi75iinqs373kv7vw"; depends=[gdata vsn XML]; }; NatureSounds = derive2 { name="NatureSounds"; version="1.0.4"; sha256="1l8c0zn0bbrcdf098pcbr8fvrl614cl6iq820q0sd7sr36n3k1jr"; depends=[knitr tuneR]; }; NbClust = derive2 { name="NbClust"; version="3.0"; sha256="1vwb48zy6ln1ddpqmfngii1i80n8qmqyxnzdp6gbaq96lakl3w3c"; depends=[]; }; NegBinBetaBinreg = derive2 { name="NegBinBetaBinreg"; version="1.0"; sha256="0ryi9gdf4sis77c0qxm6r86mfkk1nq9djs297y64nr6ng3rv9p9d"; depends=[boot Matrix mvtnorm]; }; @@ -3050,23 +3163,23 @@ in with self; { NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; - NetLogoR = derive2 { name="NetLogoR"; version="0.3.7"; sha256="0w32sp5lc37bd9fb2wn3lnym82jz3wi24fpdrs33cvkbvry12c04"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; + NetLogoR = derive2 { name="NetLogoR"; version="0.3.8"; sha256="0b8zabr9lv4c9rp5b8nrixgjcy460cnz3hqb9s33wg5qhyii43b4"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; NetMix = derive2 { name="NetMix"; version="0.2.0"; sha256="097cyk0lf3h4v3ff0icqj7a80yvs06damw1sc4hdqf2f21d6qihh"; depends=[clue gtools igraph lda MASS Matrix poisbinom Rcpp RcppArmadillo]; }; NetOrigin = derive2 { name="NetOrigin"; version="1.1-2"; sha256="0jm1iqv3ljplf38zxrxh4hjvz30m7i18vizr9pcrx010fcgqxqhp"; depends=[colorspace corpcor Hmisc igraph mvtnorm]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; NetRep = derive2 { name="NetRep"; version="1.2.4"; sha256="1swlb2k9bc7whvslxbklz864j9ynvna73hvq5rhv61cv5vy05ksd"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo RhpcBLASctl statmod]; }; - NetSci = derive2 { name="NetSci"; version="0.1.0"; sha256="1gnf9ksy5b1k08dx40hikaj8m9dkpbsl7lvxrmpg35gmm4krysvx"; depends=[binr CoDiNA dplyr igraph magrittr Rfast wTO]; }; + NetSci = derive2 { name="NetSci"; version="0.1.1"; sha256="1mc8wdjdyfwxlhlkc19nr0zq1qwzaqs7gw0lz5pw52zh42np5skr"; depends=[binr BiRewire CoDiNA cubature dplyr igraph magrittr Rfast wTO]; }; NetSimR = derive2 { name="NetSimR"; version="0.1.1"; sha256="01w2nlk1g0h81pbn3g3ch09k3ljcisysgpwihv6wlgd1wclaafmz"; depends=[]; }; NetSwan = derive2 { name="NetSwan"; version="0.1"; sha256="1mwdy3ahagiifj2bd1ajrafvnxzi74a1x1d3i2laf1hqpz3fbgld"; depends=[igraph]; }; NetWeaver = derive2 { name="NetWeaver"; version="0.0.6"; sha256="058fi3vbp11mbg69n4yp1zf48akfdl6s2p0qpa0v6ngmk2zjk0bq"; depends=[]; }; NetworkChange = derive2 { name="NetworkChange"; version="0.7"; sha256="0d9p52n4krhxy5l3f27xs90jw4am0slvyv3p6q57ba8sbwliafrf"; depends=[abind GGally ggplot2 ggrepel ggvis gridExtra igraph MASS MCMCpack mvtnorm network qgraph RColorBrewer reshape rlang Rmpfr sna tidyr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.2.1"; sha256="0a4v69p1xykzb4s9sqj2bqm333a6sx2j8f8jdnp3l7dlkwg9clqp"; depends=[IsingFit IsingSampler Matrix qgraph reshape2]; }; - NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.3"; sha256="0qpwxzhld8ikg0pg7wgl9r7av6aylx8qxqhjn6aq1q75q83rn8fn"; depends=[doParallel foreach graphon igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; + NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.4"; sha256="0z3q15aq5jqwbyxr4464nq74ib7644f185h8wfzvfi491xkrl4cr"; depends=[doParallel foreach graphon igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.1"; sha256="1958kpdcqp4hhkqmfjg2qnrzhwcmfkbgdriq9iyqmmcr7qm8c1y7"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; NetworkInference = derive2 { name="NetworkInference"; version="1.2.4"; sha256="1x63szbns8wf3k89ibk2p66prngw4fr2ckfn1568mnxdwnzvhrb4"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkReg = derive2 { name="NetworkReg"; version="1.0"; sha256="0ymbigvl1n5348g77jqs1bcda00kdqrm7zifc0ibh5mwsrx6cmds"; depends=[Matrix randnet RSpectra]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.4"; sha256="1121ma43jxc4p9rw0sc8w32shf9xrmn5qd1xsqgzr8diymc49zhg"; depends=[dplyr expm ggplot2 Matrix]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.4.1"; sha256="1zm6qgjijwadmwm7hx2w9j813qdrg4hxdxgq619gsjvmqmhgskl5"; depends=[corrplot doParallel fdrtool foreach igraph IsingFit MASS pbapply ppcor psych pwr qgraph R_matlab]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.4.2"; sha256="026gizms1xsmlpzgssgqi2y5lfhvvbqkwy5q3a0d4xvzbmyan3y7"; depends=[corrplot doParallel fdrtool foreach igraph IsingFit MASS pbapply ppcor psych pwr qgraph R_matlab]; }; NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.2"; sha256="0d73rbp8v0k0j8dp4yigan7krhglx6qfbadvyg7nsj67xc00vbfd"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; NeuralSens = derive2 { name="NeuralSens"; version="0.2.2"; sha256="17i4dyd487wnvw1zj3jciw684spc62hmjxkcy5scjbpvjv1ymn4y"; depends=[caret fastDummies ggforce ggnewscale ggplot2 gridExtra Hmisc NeuralNetTools reshape2 scales stringr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; @@ -3080,12 +3193,12 @@ in with self; { NobBS = derive2 { name="NobBS"; version="0.1.0"; sha256="0i0jyny1c29knpcl4szqwyxvdc3dqjfk5lf2xvwjdx3qas92w03l"; depends=[coda dplyr magrittr rjags]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; - NonCompart = derive2 { name="NonCompart"; version="0.4.7"; sha256="0j0faci2n0hcr136xdbxvlljqcbxv8h5mf99q13ifcw92d7dr85d"; depends=[]; }; + NonCompart = derive2 { name="NonCompart"; version="0.4.9"; sha256="0c1dhljc1xzqxs5483nkq3sjqxk75c8809ah8jr97y6ff4i1pvb9"; depends=[]; }; NonNorMvtDist = derive2 { name="NonNorMvtDist"; version="1.0.2"; sha256="11xqdrx03q3anavyxpzb0hz6mcbdy252rzzjlpa2byfdlrfvn178"; depends=[cubature]; }; NonParRolCor = derive2 { name="NonParRolCor"; version="0.6.0"; sha256="0z4c5f2x995k2lgfwnylag69sgrzq1n3qg9c8fn1mhzkdw4y4108"; depends=[colorspace doParallel foreach gtools pracma scales]; }; NonProbEst = derive2 { name="NonProbEst"; version="0.2.4"; sha256="1w2ihnwwdnxlnphyd26261lsxaknpi51c15rmn9m183djz9gsvdv"; depends=[caret e1071 glmnet Matrix sampling]; }; NonlinearTSA = derive2 { name="NonlinearTSA"; version="0.5.0"; sha256="1z3fqw19kksadc31f1idrj37gzajrx91pprd07xdar7j6hddf4sn"; depends=[car minpack_lm tsDyn]; }; - NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; + NonpModelCheck = derive2 { name="NonpModelCheck"; version="4.1"; sha256="0yd30gy1145zizdvy2zh73ppbiz3awg8j1h7j6iabqxy61h0llnw"; depends=[dr]; }; Nonpareil = derive2 { name="Nonpareil"; version="3.3.4"; sha256="1hhshcggfv92ll5zqh8hd3pldp07n0684yh1252z2jv2vbl87v3z"; depends=[]; }; NormExpression = derive2 { name="NormExpression"; version="0.1.0"; sha256="1j4q8mb70ig40acfd9kfy12vxdvq3qpf53rxh47kkw8mywnd0449"; depends=[]; }; NormPsy = derive2 { name="NormPsy"; version="1.0.8"; sha256="13w4xjdjjg9mzmfaflc0gp306kazyvxshpj4vnl6gym3vpi9qax8"; depends=[lcmm]; }; @@ -3094,26 +3207,27 @@ in with self; { NormalLaplace = derive2 { name="NormalLaplace"; version="0.3-0"; sha256="0njgjdx2yvvy5jb5zn6zr7jdz5hck5bbkicv15z4ai4ibmckqjmh"; depends=[DistributionUtils GeneralizedHyperbolic]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; - Numero = derive2 { name="Numero"; version="1.8.0"; sha256="1phjk601s29wjs19cvchn2wgld4srbcxgqsh70vp1ar0b4fgf30w"; depends=[Rcpp]; }; + Numero = derive2 { name="Numero"; version="1.8.4"; sha256="0kkska60ilk3lqf5w6z21pjldipg4pky0qgzpbsl69ial62z8xsy"; depends=[Rcpp]; }; NutrienTrackeR = derive2 { name="NutrienTrackeR"; version="1.1.0"; sha256="1xik2q229vkh34q211b6a1pij9fvcs0wik0ypl4j1jlfvl673rz8"; depends=[ggplot2 shiny]; }; OAIHarvester = derive2 { name="OAIHarvester"; version="0.3-2"; sha256="1vwi3dvpnlap1w96xc4q0cv7lym616sf4rgdqim250nsw5ciyiwx"; depends=[curl xml2]; }; OBASpatial = derive2 { name="OBASpatial"; version="1.8"; sha256="1xc4qz3i5pphgf17asyiafdnlhv5k88rw0fwkwfh8cz767wip1hw"; depends=[cubature HDInterval invgamma LaplacesDemon modeest mvtnorm truncdist]; }; OBMbpkg = derive2 { name="OBMbpkg"; version="1.0.0"; sha256="01wch8wwij3fd0jambk0hpkhlnp4ryrq8qnnr2w1iad9zssjyii5"; depends=[]; }; OBsMD = derive2 { name="OBsMD"; version="6.1"; sha256="0jvvcx2lc39rdnlbhykam6cf94lbci9zc1vshwfhvygblnmjgrzr"; depends=[]; }; OCA = derive2 { name="OCA"; version="0.4"; sha256="0ci3c5kfv3v2h7cir1f7f8r2yd0iiz2wcab512nf36mf1y5k666s"; depends=[]; }; - OCNet = derive2 { name="OCNet"; version="0.4.0"; sha256="0fxh6y1zvdia73a9xaxxz27jas0mgxhjmb5ya3hmfgglb27fvq8i"; depends=[fields igraph rgdal rgl sp spam SSN]; }; + OCNet = derive2 { name="OCNet"; version="0.5.0"; sha256="111sk662a3qrkknlvw1x605gg5rskyayd1scafbswp6zjgrczgh4"; depends=[fields igraph rgdal rgl sp spam SSN]; }; + OCSdata = derive2 { name="OCSdata"; version="1.0.2"; sha256="0119c2i9k63mbz40lbbf7x59nf4yyhrmaynn0m0sh1h3jjbsiazc"; depends=[httr purrr usethis]; }; ODB = derive2 { name="ODB"; version="1.2.1"; sha256="0frkbl99ilpmppm4fm97lbkqhmjgcwlz9j5vh5nzzcsxrh8qwicn"; depends=[DBI RJDBC]; }; ODEnetwork = derive2 { name="ODEnetwork"; version="1.3.2"; sha256="0wicp0xxqq3jl0kjhc26iqpk8rwa9nv2aiwf18pkgnqxbyw6lgnp"; depends=[checkmate deSolve]; }; ODEsensitivity = derive2 { name="ODEsensitivity"; version="1.1.2"; sha256="0yddv5h3y0xfviqjgrbixawd00jc1rh9ngckfqka5j855vhchh66"; depends=[checkmate deSolve ODEnetwork sensitivity]; }; ODS = derive2 { name="ODS"; version="0.2.0"; sha256="0i7giibass7hadvv6mb7k9xrykgfss57jmm6gpbym8qcywhzq4ny"; depends=[cubature survival]; }; OData = derive2 { name="OData"; version="0.6"; sha256="10r4kfhdabramjmkgc4fl0bljaiqbvc7rq4byas7q8cmji2czw6f"; depends=[RJSONIO XML]; }; + ODataQuery = derive2 { name="ODataQuery"; version="0.5.3"; sha256="058j3rc5kh134ndsxn5gck2xh6llrs73cyxpa5z8zkmsw9am22qj"; depends=[httr jsonlite R6 rlang]; }; OECD = derive2 { name="OECD"; version="0.2.4"; sha256="1cxjd5h10ynjzblk5d5crdknk19pn8ik37d8hffvz5iydp7ammqn"; depends=[httr rsdmx xml2]; }; OEFPIL = derive2 { name="OEFPIL"; version="0.1.0"; sha256="07i33757py898kflvfwl62rjmlywvis9l3c0qjjl8fkl98p3rwxz"; depends=[Deriv ggplot2 MASS matrixcalc minpack_lm plyr]; }; OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; }; OHPL = derive2 { name="OHPL"; version="1.4"; sha256="0svim112khdymdj1bsj8vri6r0zph5312y148mlh5h98rah40i08"; depends=[glmnet mvtnorm pls]; }; - OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; OLScurve = derive2 { name="OLScurve"; version="0.2.0"; sha256="1zqapfwgwy9rxnbhmlgplkphw1bdia4cyi9q6iwcppw3rjw75f1n"; depends=[lattice]; }; - ONEST = derive2 { name="ONEST"; version="0.0.1"; sha256="1r6nz5fmx7vsqq0hyns5kkimm1cgi845cd887xs2qvknzq52v362"; depends=[]; }; + ONEST = derive2 { name="ONEST"; version="0.1.0"; sha256="07mfykpkcgcqafw1w3qr9x83zpy2p0q7v1zkgwpd69g79j0r3yap"; depends=[]; }; ONETr = derive2 { name="ONETr"; version="1.0.3"; sha256="14l56qcmyyk2ivcfkfv7j2k4i1mfrngpi9zcc88w6xfhz5qlb548"; depends=[plyr RCurl XML]; }; OOBCurve = derive2 { name="OOBCurve"; version="0.3"; sha256="1i7prybs3b60ipl34zrq6mcr6w9kc1d44b14mxcd752k42k6xs2r"; depends=[mlr randomForest ranger]; }; OOI = derive2 { name="OOI"; version="0.1.0"; sha256="0ivxgq539v68kak3zzakywppba0grzh7qn1h404s4ag30cxv0g8p"; depends=[modi]; }; @@ -3126,7 +3240,7 @@ in with self; { ORCME = derive2 { name="ORCME"; version="2.0.2"; sha256="1pm8ajj24qqj2fir0gjzq5f4mfpl1cnj6fm2z5qg6g3sbnm57ayk"; depends=[Iso]; }; ORDER2PARENT = derive2 { name="ORDER2PARENT"; version="1.0"; sha256="04c80vk6z227w6qsnfls89ig4vqyiiymdarhq1pxa0gpr8j2ssx5"; depends=[Matrix]; }; ORIClust = derive2 { name="ORIClust"; version="1.0-1"; sha256="1biddddyls2zsg71w4innxl0ckfb80q2j9pmd56wvbc0qnbm0w3q"; depends=[]; }; - ORION = derive2 { name="ORION"; version="1.0.1"; sha256="09z1yhiv88nxgig81zwxnwaqwswbql2dhilsln0ksis49p8il3kg"; depends=[doParallel e1071 foreach igraph knitr randomForest rmarkdown TunePareto]; }; + ORION = derive2 { name="ORION"; version="1.0.2"; sha256="04wlrn9w2wmm8cz1ifjxdv00iy4r5ghk3syq1d5c350bisr3fkrz"; depends=[doParallel e1071 foreach igraph knitr randomForest rmarkdown TunePareto]; }; ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; }; ORTSC = derive2 { name="ORTSC"; version="1.0.0"; sha256="0byja1gi44ymn68cfai8apcimlxmnflqr1pj8k4y7l8lqd3fyz60"; depends=[googleAuthR googleCloudVisionR]; }; ORdensity = derive2 { name="ORdensity"; version="1.0"; sha256="1g9d85dyfhlqmwsigdn64hifasbvw70g3wpph2h9v2ksvia0cd31"; depends=[cluster distances doParallel doRNG foreach plyr Rfast]; }; @@ -3138,48 +3252,49 @@ in with self; { OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; OTUtable = derive2 { name="OTUtable"; version="1.1.2"; sha256="1sm037ihm12xyp7ns5f0c1psflvm1aj3xnsj5nzh2rsjn35hvd6h"; depends=[]; }; OTclust = derive2 { name="OTclust"; version="1.0.4"; sha256="11mr67zp68wzf1dd6vb3f31g8a430im97sdjsb0w4awqpmjdyyrz"; depends=[class ggplot2 magrittr RColorBrewer Rcpp]; }; - OTrecod = derive2 { name="OTrecod"; version="0.1.0"; sha256="1h1xlp0j6ch17a02gy5nyv6nr7mvrz6bhx9h2wmak06x1y8bxirx"; depends=[dplyr FactoMineR mice missMDA ompr ompr_roi party plyr proxy rdist ROI ROI_plugin_glpk StatMatch vcd]; }; + OTrecod = derive2 { name="OTrecod"; version="0.1.1"; sha256="0rf50li6pnyi9lkxwlayq3190l85cxfmy3ldx0g6fr32ksfjsgfq"; depends=[dplyr FactoMineR mice missMDA ompr ompr_roi party plyr proxy rdist ROI ROI_plugin_glpk StatMatch vcd]; }; OUwie = derive2 { name="OUwie"; version="2.6"; sha256="0yh0hnlrimfqajl0qixs0ciiwpl9r38w9y1g9bhgvafj190ikb54"; depends=[ape corpcor geiger igraph interp lhs nloptr numDeriv paleotree phangorn phylolm phytools RColorBrewer]; }; - OVtool = derive2 { name="OVtool"; version="1.0.1"; sha256="0ixq8j6p59ngfbvlmhr3bi1cqlz06ygzzarjjrzzacmafg1ylp8m"; depends=[Amelia devtools dplyr EnvStats ggplot2 ggrepel glue magrittr metR progress purrr rlang survey tibble tidyselect twang varhandle]; }; + OVtool = derive2 { name="OVtool"; version="1.0.2"; sha256="0bm4iqzzdzy47ha90zm0nz4qm41q2rbdbckwpdnhk5c73l64xxvq"; depends=[Amelia devtools dplyr EnvStats ggplot2 ggrepel glue magrittr metR progress purrr rlang survey tibble tidyselect twang varhandle]; }; OWEA = derive2 { name="OWEA"; version="0.1.1"; sha256="00mx94v3krivsxha6sh13xhn2bdj77g8858vc4r2cy23ab4bg0g7"; depends=[gtools MASS shiny]; }; Oarray = derive2 { name="Oarray"; version="1.4-9"; sha256="04jng89s19rd8lbjm76wm4p4ggkffwnsa5qa60c4lwn2rj89a8a1"; depends=[]; }; OasisR = derive2 { name="OasisR"; version="3.0.2"; sha256="1388ld2nws3ppnkavg8s59q3inqf365c5cf9qvzbj6icmwqs9rdd"; depends=[measurements outliers rgdal rgeos seg spdep]; }; Observation = derive2 { name="Observation"; version="0.2.0"; sha256="0v81manzcvv8x9hbf75c8klslzdabha53rasyba91vvcbrshhq6j"; depends=[AGread svDialogs]; }; - OceanView = derive2 { name="OceanView"; version="1.0.5"; sha256="11gq15v3blisplbi6q6jgfsjbnbmfnyxdz8pq1ny9vgljzninvn1"; depends=[plot3D plot3Drgl rgl shape]; }; + OceanView = derive2 { name="OceanView"; version="1.0.6"; sha256="1ww6xhpvs3y0zx7pgj8083a8v4l4cm0b0b497b4gsjbcbnbnal9c"; depends=[plot3D plot3Drgl rgl shape]; }; + OddsPlotty = derive2 { name="OddsPlotty"; version="1.0.1"; sha256="140svvixywiky565vawmzi43xvqq7g0q3d6gi90qk95xxin1d9il"; depends=[caret e1071 ggplot2 ggthemes magrittr mlbench tibble]; }; + OenoKPM = derive2 { name="OenoKPM"; version="0.1.2"; sha256="1rw740zw38k3q9kl89rvn740d5v4k1hhmlz4bp9ynhnq34g9p9rq"; depends=[extrafont ggplot2 ggtext minpack_lm openxlsx]; }; Ohit = derive2 { name="Ohit"; version="1.0.0"; sha256="132d4drc2phw9ppxnczb1ycdg3dv085k8p6bcaj3v866j0hfxjgb"; depends=[]; }; OjaNP = derive2 { name="OjaNP"; version="1.0-0"; sha256="0xddspnnwlcxh2i66ilh6i920k53y7fv6m1hgj9h28qg2wy0vyah"; depends=[ICS ICSNP Rcpp]; }; OkNNE = derive2 { name="OkNNE"; version="1.0.0"; sha256="0ggx508cqkqc51qw10cajm8r3k5h474n7y8dgck2fr4db047zmcm"; depends=[FNN]; }; - OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; OmegaG = derive2 { name="OmegaG"; version="1.0.1"; sha256="1aihcrgml67rvnx9vpnq2nnbc79kicw4ks1fradsa36ykkdz6b1g"; depends=[]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; - OmicsPLS = derive2 { name="OmicsPLS"; version="1.2.0"; sha256="108rp76g4cy7zaxv9q979rlv4pn9kb5i3f3iz29cdvxm55a55khv"; depends=[ggplot2 magrittr tibble]; }; + OmicNavigator = derive2 { name="OmicNavigator"; version="1.4.3"; sha256="0d000yscxqzk80fgavgilvwr6xw1czkdcpz19f5ra4wnxgcpbb3i"; depends=[data_table jsonlite]; }; + OmicsPLS = derive2 { name="OmicsPLS"; version="2.0.2"; sha256="08vx4925j5ln366h7nzhf1ra5ciplrqw911258chi9di7gpm8g50"; depends=[dplyr ggplot2 magrittr softImpute tibble]; }; Omisc = derive2 { name="Omisc"; version="0.1.4"; sha256="1f6aakywjabq0xds5yl70ivr1jmw26zry2m65xszfp8p5mp45c7g"; depends=[copula MASS psych]; }; OmnibusFisher = derive2 { name="OmnibusFisher"; version="1.0"; sha256="0x3q04g45nixgsrl4biqqi6bk4kx79spq5whm3n4ppr0nkv8dw4h"; depends=[CompQuadForm stringr survey]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; - OncoBayes2 = derive2 { name="OncoBayes2"; version="0.6-5"; sha256="1c8q3kd295hnky7pdd78na92gms5wjs1pjds9smwmpi7lpq0qz3b"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders tibble tidyr]; }; + OncoBayes2 = derive2 { name="OncoBayes2"; version="0.8-2"; sha256="0hhj1sdn0yzcib0dh5prc93ill2a3mvh5a8jjsvigk3j5bvhbfwi"; depends=[abind assertthat bayesplot BH checkmate dplyr Formula ggplot2 Rcpp RcppEigen RcppParallel rlang rstan rstantools scales StanHeaders tibble tidyr tidyselect]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; OneR = derive2 { name="OneR"; version="2.2"; sha256="1k7rzhcwq5b2yi4zfsc1r0yb6w65gxj9835d2a1dclallja3zav2"; depends=[]; }; OneStep = derive2 { name="OneStep"; version="0.9.2"; sha256="06gnw364p74nnb9rx3ghyfavd02xmnvzy94hzdwgxqs86z30b2gz"; depends=[fitdistrplus numDeriv]; }; OneTwoSamples = derive2 { name="OneTwoSamples"; version="1.0-3"; sha256="0019rc2f4jmbm6sinkvalvjqwi822x78aiin88kg8qbbb5ml8l89"; depends=[]; }; - OpVaR = derive2 { name="OpVaR"; version="1.1.1"; sha256="0sb2brwv20ppgsw1x2zz4frkdwhgq8766k8fchr6flp4c4jkkyma"; depends=[actuar evmix MASS pracma ReIns tea truncnorm VineCopula]; }; + OpVaR = derive2 { name="OpVaR"; version="1.2"; sha256="1923p60yzh8fycwl1fwy01r7ml5yx0kx01ckhgii7slm4cachf5f"; depends=[actuar evmix MASS pracma ReIns tea truncnorm VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; - OpenCL = derive2 { name="OpenCL"; version="0.2-1"; sha256="1bhnqwrb8phldk5hr06iyvw8fx03x01ddqr4y5zs4a1wpyah7j2w"; depends=[]; }; - OpenImageR = derive2 { name="OpenImageR"; version="1.1.8"; sha256="0v07bm257h78n1bxc4a6vqhlq1a87h2yj83bph3bg9nwjg4lcw3z"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; + OpenCL = derive2 { name="OpenCL"; version="0.2-2"; sha256="0gxzda615f67nbljancb8kixzdzkjsy8i0345mlnmlr8kqv4qyhw"; depends=[]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.2.0"; sha256="161bic7vjknv0hnf8qkkwqbxjcb9mhg62kp7dqrxxrgmgcvazb6g"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; OpenLand = derive2 { name="OpenLand"; version="1.0.1"; sha256="1wa7hkfwvzzj9lm07hdajwf6g8ys3g2ff8vqva3gqwqa9j1fam9n"; depends=[circlize dplyr ggplot2 gridExtra networkD3 raster tidyr]; }; OpenML = derive2 { name="OpenML"; version="1.10"; sha256="132swv22ymm0wxq8y65y2niq8chmga1mnl1lgn6m3cgljvwad47r"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise stringi XML]; }; - OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.19.5"; sha256="0k8j6wi30yf1r550hpwl87x63i5kznz5gs46b1pl8xxcrmb863sv"; depends=[BH digest lifecycle MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.19.8"; sha256="0q37mwxqhgdi05rwdfwfapgazfp541xsvw3yskf21lv11y2yjjyb"; depends=[BH digest lifecycle MASS Matrix Rcpp RcppEigen RcppParallel rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.12"; sha256="02p9b2y99z9yrrm2pl86p0yqwah0yjic2wdcd4k0mhccimmmkaip"; depends=[abind colorspace GPArotation openxlsx plyr psych pvclust rgl stringr XML]; }; - OpenRepGrid_ic = derive2 { name="OpenRepGrid.ic"; version="0.5.0"; sha256="1vr112z2hh4q5krq7w7wkzky717nbjvgnpvwj962sqnkpln5v1f9"; depends=[dplyr DT formattable igraph magrittr openxlsx RColorBrewer reshape2 rintrojs scales shiny shinyBS shinycssloaders shinydashboard shinydashboardPlus shinyFeedback shinyjs shinythemes shinyWidgets stringr testthat tidyr tidyverse withr]; }; - OpenSpecy = derive2 { name="OpenSpecy"; version="0.9.1"; sha256="0hcx4dxhy223il7j2xdbg1pn592lcqga4dkimj5hfq0pmg54wikc"; depends=[digest dplyr hexView hyperSpec magrittr osfr rlang shiny signal]; }; + OpenRepGrid_ic = derive2 { name="OpenRepGrid.ic"; version="0.5.1"; sha256="06yy2c64lrqj6h36swbxqsmphsglynxlbb76s5rc79d1627hsmdc"; depends=[dplyr DT formattable igraph magrittr openxlsx RColorBrewer reshape2 rintrojs scales shiny shinyBS shinycssloaders shinydashboard shinydashboardPlus shinyFeedback shinyjs shinythemes shinyWidgets stringr testthat tidyr tidyverse withr]; }; + OpenSpecy = derive2 { name="OpenSpecy"; version="0.9.2"; sha256="0i8qqf7g9w76gc1yrmklql3mhpzs2qlb8rs2fmadyzph5fzay92h"; depends=[digest dplyr hexView hyperSpec osfr rlang shiny signal]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.4"; sha256="0kyv14lxi86n6aba4jqmsfpmn075k0ki34q6gkkvhq8yv48wg831"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; Opt5PL = derive2 { name="Opt5PL"; version="0.1.1"; sha256="0v3ibfzmkfnkhxylhaqcd3yqygsk7027ga12vb6gj4h4zcccf17f"; depends=[matrixcalc Rcpp]; }; - OptCirClust = derive2 { name="OptCirClust"; version="0.0.3"; sha256="0z0ak5h2m7cpws17v8z203hjr17jkqsm1h1gw7lqrzsl8cjwnkrn"; depends=[Ckmeans_1d_dp plotrix Rcpp]; }; + OptCirClust = derive2 { name="OptCirClust"; version="0.0.4"; sha256="0g34kn2gmvy9r4ph0vbssc9gl8bcpw6d72b8zpf38iml4zh52b0n"; depends=[Ckmeans_1d_dp plotrix Rcpp Rdpack reshape2]; }; OptGS = derive2 { name="OptGS"; version="1.1.1"; sha256="1acwwjng5ri5vganv7b5pagp7524ifr0q8h1pbfb5g6z3x6w08kh"; depends=[]; }; OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; }; OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; }; - OptM = derive2 { name="OptM"; version="0.1.3"; sha256="1dykfhnkrqz2axzzggpzaiknd52rx8zj4nk3nv2rvh74f9hv8px7"; depends=[boot SiZer]; }; + OptM = derive2 { name="OptM"; version="0.1.5"; sha256="0lqqi9s328sqqylj2qi9a4lcx10gcpkw5yc3a17kf6gia2b1l2gn"; depends=[boot SiZer]; }; OptSig = derive2 { name="OptSig"; version="2.1"; sha256="1k43qsjdc00plgsindjkfn6v098v0zfy7sjkh4n4ybib2qx3v8fn"; depends=[pwr]; }; OptimaRegion = derive2 { name="OptimaRegion"; version="1.1"; sha256="1bikc12a5v3q7f26r14pdfmnxpyqzxa94a10mx5g954km3a329ly"; depends=[boot DepthProc fields geometry magrittr mclust nloptr Rdpack Rdsdp rsm spam stringr]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-4"; sha256="0n2vmzkc733yzs155zdj2n8ng74x9hy4m91fl7fac8d4gnrnc8yg"; depends=[]; }; @@ -3193,33 +3308,33 @@ in with self; { OrdNor = derive2 { name="OrdNor"; version="2.2.3"; sha256="0yjvylp8z24w6nbwy9rjyk0y7gpzsxzsqm8x4q4fn8g87cb3314v"; depends=[corpcor GenOrd Matrix mvtnorm]; }; OrdinalLogisticBiplot = derive2 { name="OrdinalLogisticBiplot"; version="0.4"; sha256="1axn03yrw30r2j9ss5ig9sq857y37vhrr4a7px68jc2az8mng41j"; depends=[MASS mirt NominalLogisticBiplot]; }; OrgMassSpecR = derive2 { name="OrgMassSpecR"; version="0.5-3"; sha256="1dx9d8rb1dfqyhyc26zhfnxiv3rz2ikvs2mwqnsrq3lsjs9dvyc8"; depends=[]; }; - OriGen = derive2 { name="OriGen"; version="1.4.3"; sha256="0a7mql87dqxrfx7phgy32hbanfwnjx8x52mj83xf2mgmqhrcikr6"; depends=[ggplot2 maps]; }; OrthoPanels = derive2 { name="OrthoPanels"; version="1.1-4"; sha256="112dvc1scv299rw1w30fw2jj4gz74b7sidcdzcba3mhn3k7aw0ja"; depends=[MASS]; }; OscillatorGenerator = derive2 { name="OscillatorGenerator"; version="0.1.0"; sha256="0zqw8l955msxkdviw5vd493749zwc22qby9mfmyqnqqmq0pyjw4w"; depends=[]; }; + Ostats = derive2 { name="Ostats"; version="0.1.0"; sha256="12gcw9rv43i61hciv4x2imhs216sdw8ln9pgh60j0ybfcgv87w0b"; depends=[circular ggplot2 gridExtra hypervolume MASS matrixStats sfsmisc viridis]; }; OutlierDC = derive2 { name="OutlierDC"; version="0.3-0"; sha256="1vm3zx4qmj9l0ddfqbksm1qyqzzqrxf93gh4kj52h68zlsfxwv41"; depends=[Formula quantreg survival]; }; OutlierDM = derive2 { name="OutlierDM"; version="1.1.1"; sha256="0n8iq464ryc3v4wms7cdka39870w5pg29z9v8gmdsp4d9cfsx9v4"; depends=[MatrixModels outliers pcaPP quantreg]; }; OutliersO3 = derive2 { name="OutliersO3"; version="0.6.3"; sha256="165v572w9bnvay9f0xyxzbhgj1i86ndia4rzqy98i48dfdbdb990"; depends=[cellWise dplyr FastPCS forcats GGally ggplot2 HDoutliers memisc rlist robustbase robustX tidyr]; }; OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; - OwenQ = derive2 { name="OwenQ"; version="1.0.3"; sha256="0kra8pvz21kqwzwsrqh6vwfyq9qqrar3glcycd2gip19273whdim"; depends=[BH Rcpp RcppEigen RcppNumerical]; }; + OwenQ = derive2 { name="OwenQ"; version="1.0.4"; sha256="18hqwp7cj0fdvvqn0bd2grrp80qsm989mwc6vna4fj75a8xpvcqn"; depends=[BH Rcpp RcppEigen RcppNumerical]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; PAC = derive2 { name="PAC"; version="1.1.4"; sha256="0h7381mr3jgzl7fi6v7amgmkf5agpkgy068c6ysgh3adlwsh6gs6"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; PACLasso = derive2 { name="PACLasso"; version="1.0.0"; sha256="1qzzymhfsjy8mk0r0xpd5h4wrx4wk8gq3vi6fnawkq5xkrg26rld"; depends=[lars limSolve MASS penalized quadprog]; }; PACVr = derive2 { name="PACVr"; version="0.9.4"; sha256="0sj5ibqaw452lncxxbm6xkgmmh9ny6hx4b9hppzwglpgk6vvb5f3"; depends=[BiocGenerics Biostrings genbankr GenomicAlignments GenomicRanges IRanges optparse RCircos]; }; - PAFit = derive2 { name="PAFit"; version="1.0.1.8"; sha256="12rqf7mcbsc4ngq75gw8nrllqc2nd9l5p8jdnx6gjn26ldydg6h6"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; - PAFway = derive2 { name="PAFway"; version="0.1.3"; sha256="1ggmqbls8i5zqihzi66kaw09bbip2spiiizfzkx7amcvpm8zsr7r"; depends=[GGally ggplot2 igraph network scales sna]; }; + PAFit = derive2 { name="PAFit"; version="1.1.0.4"; sha256="0pwfc9jk7yg18y5mym3ivkasrx7g3263gq8z0q8ljzvvvah84sb5"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; - PAMA = derive2 { name="PAMA"; version="1.1.0"; sha256="1ahd2kxg39vc4cg3ikraa2rm4w0b5asga1qcymv3hrcxxh91xqah"; depends=[ExtMallows mc2d PerMallows Rcpp]; }; + PAMA = derive2 { name="PAMA"; version="1.2.0"; sha256="12fvkcdkn66gzr193fq9byf64qlq2x9dkjv9hpfw770l4yw496jn"; depends=[ExtMallows mc2d PerMallows rankdist Rcpp]; }; + PAMhm = derive2 { name="PAMhm"; version="0.1.2"; sha256="0k0n3ni0ypcizri39v76x1vv7hlxlmbpfi7w81yxy9inz7zz4zfw"; depends=[cluster heatmapFlex plyr R_utils RColorBrewer readmoRe readxl robustHD]; }; PAMmisc = derive2 { name="PAMmisc"; version="1.6.8"; sha256="02f14byw0dik0ncc3c9dr0zqfqsd528srq6q38la3w70lghr92gv"; depends=[dplyr geosphere ggplot2 hoardr httr lubridate magrittr ncdf4 PamBinaries plotKML purrr RcppRoll rerddap RSQLite seewave stringr tuneR viridisLite]; }; - PAMpal = derive2 { name="PAMpal"; version="0.9.14"; sha256="1ijzqrndkpqhjczki6g2arp4fscvdff9gixgqlr9ibvr7g7b0z3f"; depends=[data_table dplyr gam ggplot2 knitr lubridate magrittr manipulate PamBinaries PAMmisc purrr readr reticulate rjson rlang RSQLite rstudioapi seewave signal stringr tidyr tuneR xml2]; }; + PAMpal = derive2 { name="PAMpal"; version="0.13.0"; sha256="0dhcfl7pklrhyn78mdmhvayiv70n0y5i3s17briayrwb89bjgij1"; depends=[data_table dplyr gam ggplot2 knitr lubridate magrittr manipulate PamBinaries PAMmisc purrr readr reticulate rjson rlang RSQLite rstudioapi seewave signal stringr tidyr tuneR xml2]; }; PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; }; PAS = derive2 { name="PAS"; version="1.2.5"; sha256="175p3bnpnhknfsc29hri0l2ipz1x6qcxs2bq7awns8lccam466r2"; depends=[glmnet]; }; - PASSED = derive2 { name="PASSED"; version="1.0-3"; sha256="1snphwngs9alg114h9m5i84dpg3zpm577kvz8qlrlk37ar1mxalk"; depends=[betareg rootSolve]; }; + PASSED = derive2 { name="PASSED"; version="1.1-1"; sha256="06dr5q14lyam6ywn6bg6vfkb68jqb6hw2phd10jcpdzcjvhsbz0r"; depends=[betareg rootSolve]; }; PASWR = derive2 { name="PASWR"; version="1.1"; sha256="1rxymnqvflypc6m62f5vw65l8x1m2yah7r11hhpmzdq2l2sg8fci"; depends=[e1071 lattice MASS]; }; - PASWR2 = derive2 { name="PASWR2"; version="1.0.2"; sha256="04vwgmi56spjriwp2ls5zcgslfg1y4pvwa0m33f9izay0y6q2wfx"; depends=[e1071 ggplot2 lattice]; }; + PASWR2 = derive2 { name="PASWR2"; version="1.0.5"; sha256="124ybvqdz2ikwqagq6bw74487psrscwxkj0gqwz43p8kinkvx3ks"; depends=[e1071 ggplot2 lattice]; }; PASenseWear = derive2 { name="PASenseWear"; version="1.0"; sha256="0x84j1vdds4g08birmjxb0c2g1ahwv83bk11532jkmg32dnhmj58"; depends=[ggplot2]; }; PAmeasures = derive2 { name="PAmeasures"; version="0.1.0"; sha256="0c2pkms06lijly9clxp6zkasqy4zjicdwnvbqwvhp45yavwmkkkj"; depends=[survival]; }; - PAsso = derive2 { name="PAsso"; version="0.1.8"; sha256="0lywr5rs2ap8psv6wzm2j6h7wz9xq494y39934xj153nqgccbqrv"; depends=[copBasic copula doParallel dplyr foreach GGally ggplot2 goftest gridExtra MASS pcaPP plotly progress Rcpp tidyverse VGAM]; }; + PAsso = derive2 { name="PAsso"; version="0.1.10"; sha256="1qfwwgcra86x4469bqrv3jdm3vyvdiialfgfy184d1l5294pwv4x"; depends=[copBasic copula dplyr foreach GGally ggplot2 gridExtra MASS pcaPP plotly progress Rcpp VGAM]; }; PAutilities = derive2 { name="PAutilities"; version="1.0.1"; sha256="13k0dkgz82d4iqc7kpz1cw71w1m3bjkar4a7xndms1nj6sp7vp03"; depends=[dplyr equivalence ggplot2 lazyeval lubridate magrittr matchingMarkets Rcpp reshape2 rlang]; }; PBD = derive2 { name="PBD"; version="1.4"; sha256="1n8gq8ms6gszr469hblipbgalc5m7gfiknpsbqywxml62sr4wbsb"; depends=[ade4 ape DDD deSolve phytools]; }; PBIBD = derive2 { name="PBIBD"; version="1.3"; sha256="0zh73bsiwmsqw1vhs2dazndsf0894kfv3vfv88wr4fnh7njysz6r"; depends=[]; }; @@ -3235,13 +3350,12 @@ in with self; { PCADSC = derive2 { name="PCADSC"; version="0.8.0"; sha256="0pwkmmnsw3c6ch2k5wdc8ig71994pdp79v3a5aa9n9aq55a8c2ir"; depends=[ggplot2 Matrix pander reshape2]; }; PCAmatchR = derive2 { name="PCAmatchR"; version="0.3.0"; sha256="181glfz5nqffdyycycf4w96lyjkvqsbs3av47ah2hagl3innr1vk"; depends=[]; }; PCAmixdata = derive2 { name="PCAmixdata"; version="3.1"; sha256="0flrsnbchwk06dmkg3vqykp9n4pqs265szn1r10navp8ki3rrmvh"; depends=[]; }; - PCDSpline = derive2 { name="PCDSpline"; version="1.0"; sha256="15kmvcwvwlsr1107n7mfajvf9b1kcslnhsdx0drjjhsvq193qrqa"; depends=[matrixcalc nleqslv]; }; PCDimension = derive2 { name="PCDimension"; version="1.1.11"; sha256="0kpw0rpb9k82psfpd19vvvsakvm0pcz1n3kkkcihagp1kzlv4xkw"; depends=[changepoint ClassDiscovery cpm kernlab oompaBase]; }; PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; }; PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; }; PCICt = derive2 { name="PCICt"; version="0.5-4.1"; sha256="17ipmv6ps7c9dv4k9kxjjynnlgr63baz9z9ndwfg0lckc3vw81ya"; depends=[]; }; PCL = derive2 { name="PCL"; version="1.0"; sha256="0sqlwg0aiw9f1z4x5nixv4x3rq5rnm5i1hijdqygnh9dvckfrgs0"; depends=[]; }; - PCMBase = derive2 { name="PCMBase"; version="1.2.11"; sha256="010188p7f4nr5jxayq02a8q2r23a9w9rd6njxckca99d903cpwg5"; depends=[ape data_table expm ggplot2 mvtnorm xtable]; }; + PCMBase = derive2 { name="PCMBase"; version="1.2.12"; sha256="0p18g660yax8mmnhq1pd4nax4saf8syqj7c1xpspjbfkr78kh15q"; depends=[ape data_table expm ggplot2 mvtnorm xtable]; }; PCMBaseCpp = derive2 { name="PCMBaseCpp"; version="0.1.9"; sha256="0k40mxs8w1vk7qwpkv8gnq6cq3kpj7wvf0i6f1qn1wmm2vvz1kfy"; depends=[abind data_table PCMBase Rcpp RcppArmadillo]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-2"; sha256="1zr2kzwxgr7rifkkmgz9vhq5i9ky6lqrss742vybwl0nx78mad3p"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.7"; sha256="0gxymz0yws1q1bxkpxi0lmbv57xx62h3dl7z3i2cnbagswkax3zh"; depends=[ape nlme phylobase picante RcppArmadillo SYNCSA vegan]; }; @@ -3249,8 +3363,8 @@ in with self; { PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; PCovR = derive2 { name="PCovR"; version="2.7.1"; sha256="1lvj3kf4pnvbr7lk3kzvh72akga49zx25b3w7nq24925s129sqx1"; depends=[GPArotation MASS Matrix ThreeWay]; }; - PDE = derive2 { name="PDE"; version="1.2.1"; sha256="0n7s1f97cszw6f3l3654chvi96j4anhykcm41gikc4lli8k8pgrw"; depends=[tcltk2]; }; - PDFEstimator = derive2 { name="PDFEstimator"; version="2.2"; sha256="0jmbf0js463fdrbs8m56alsiyiggq2h5kgqqkm7j55mn657bpzyz"; depends=[]; }; + PDE = derive2 { name="PDE"; version="1.3.0"; sha256="1nz0xrhs2iin2grqvxhp99775q8wrjp7isyr1i415vi936jabs0i"; depends=[tcltk2]; }; + PDFEstimator = derive2 { name="PDFEstimator"; version="3.0"; sha256="0qkxnvbxvl7hfr08r9mj0hqqd0fr099h3gf1kf4czn98h1s2lc0y"; depends=[]; }; PDM = derive2 { name="PDM"; version="0.1"; sha256="1pbdy13ji9c6krgh2r1qgrzmf4hdmrdzylsr71n3hh5jq4n9xg8x"; depends=[jpeg]; }; PDN = derive2 { name="PDN"; version="0.1.0"; sha256="082ydvwcjc2rs7hlakrkgbbm9c419m408a14a9dgfdwm16yif3jd"; depends=[ggplot2 glmnet network survival]; }; PDQutils = derive2 { name="PDQutils"; version="0.1.6"; sha256="0mmfi0ifwbkjm0274sddpwkj27cvdkwngnka8vdmfm4b2nn7vgsp"; depends=[moments orthopolynom]; }; @@ -3259,18 +3373,20 @@ in with self; { PEACH = derive2 { name="PEACH"; version="0.1.1"; sha256="0ciq2cci35rv39pgpp7i30jxlmr85726kh07ww22ryq3bm04ylg8"; depends=[MASS metap mnormt]; }; PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; }; PEIP = derive2 { name="PEIP"; version="2.2-3"; sha256="1ljalgffgrn9l3q914jjxrn1j740jqk4j8q1vzn3si4np9mz92vp"; depends=[bvls fields geigen Matrix pracma RSEIS]; }; - PELVIS = derive2 { name="PELVIS"; version="2.0.2"; sha256="07lb0vfi6szcbznd7ylqmk02l6w02b5v26i9vbwkvpy71nzvvfxd"; depends=[DT MASS shiny]; }; + PELVIS = derive2 { name="PELVIS"; version="2.0.3"; sha256="1sym6lbspzqcmg0k0r07kv65pswq39fxx5xdyiv6pm2r3v49p8jq"; depends=[DT htmlwidgets MASS shiny]; }; PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; - PERMANOVA = derive2 { name="PERMANOVA"; version="0.1.0"; sha256="02j9xsb35nycchxqq9hpcm4n433h0k9rnxb3544khb73a4ifszha"; depends=[deldir MASS Matrix scales xtable]; }; + PERMANOVA = derive2 { name="PERMANOVA"; version="0.2.0"; sha256="1lmnp1g1i1kqa30cvakkl8g2m2h5jl73qx8dy37kv62mv0knlg5m"; depends=[deldir MASS Matrix scales xtable]; }; PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; }; PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; PGRdup = derive2 { name="PGRdup"; version="0.2.3.7"; sha256="0zm0cm98nps2bfr66mb4j7a0v3s407zqrl2l2nvzg9yyqlaznzc3"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; + PH1XBAR = derive2 { name="PH1XBAR"; version="0.10.1"; sha256="0b9g2mz0vcaqmbpm0cisr6c9l2bk5y3bn0s9096dl5fq9hyma7na"; depends=[forecast mvtnorm pracma]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; PHEindicatormethods = derive2 { name="PHEindicatormethods"; version="1.3.2"; sha256="193fc3l1zbbrnr4jl07bxv8jssyhpgh9aydi6f4w8mh56x9nazhk"; depends=[broom dplyr purrr rlang tibble tidyr]; }; - PHInfiniteEstimates = derive2 { name="PHInfiniteEstimates"; version="1.9"; sha256="1jgd82kfc36q6l7f65lksv79aqfdk0c1vglfh2dikvcz60di5nph"; depends=[coxphf lpSolve mlogit Rdpack survival]; }; + PHInfiniteEstimates = derive2 { name="PHInfiniteEstimates"; version="2.0"; sha256="0lni9hlwv81jh7b391sb1rpmgsplnwlvjc3w9q3bc7ssdc7y9a38"; depends=[coxphf lpSolve mlogit Rdpack survival]; }; PHSMM = derive2 { name="PHSMM"; version="1.0"; sha256="1phfdzhfdhyry11plfd8a2lcn3rg02m84brw7fp2lg3hsxjg5ch7"; depends=[Rcpp RcppArmadillo]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.11"; sha256="1fq2ny093b4881nwgj6wr8qd5g4dcxb51sdx40ndyxxpq6jj16n9"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.4"; sha256="06fy5dm4mnp29f01163rw1d1hyl7rlcp4pfw18s87ckpr931qyma"; depends=[survival]; }; + PICBayes = derive2 { name="PICBayes"; version="1.0"; sha256="1js6zrnyc8v345cds3pypb2g9dd3vvj3bjq159qc113m9ll2xk0b"; depends=[coda MCMCpack survival]; }; PIGShift = derive2 { name="PIGShift"; version="1.0.1"; sha256="115dnsh4b1rxx1d2kc8x3vl5366h5f0i6gg8l1w3v0f8309qigis"; depends=[ape mvtnorm]; }; PINSPlus = derive2 { name="PINSPlus"; version="2.0.5"; sha256="1j44ha8saszw0faxkp2887hhvba9i0m8pcq6bf76190924fq305g"; depends=[cluster doParallel entropy FNN foreach irlba matrixStats mclust Rcpp RcppArmadillo RcppParallel]; }; PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; @@ -3280,25 +3396,26 @@ in with self; { PKPDmodels = derive2 { name="PKPDmodels"; version="0.3.2"; sha256="1h893civ77ahbgjnc6kq3l7rszmqmx9dlxwavldigpq3r79vd86k"; depends=[]; }; PKconverter = derive2 { name="PKconverter"; version="1.5"; sha256="1zk2sjrjhq7n2k2p29r2qc6qdghr3riyjvvawz0g74lidg7hm1ly"; depends=[shiny shinydashboard shinythemes]; }; PKreport = derive2 { name="PKreport"; version="1.5"; sha256="16hss9migbxpnw5f9gcw1nlvb81iyji00ylx5wd6kdwhz0ids9wj"; depends=[ggplot2 lattice]; }; + PL94171 = derive2 { name="PL94171"; version="0.3.2"; sha256="07mskfg3a6h60abhiayk88qjlw3ixfa8fmmgamwax42y82hy8dci"; depends=[dplyr httr readr sf stringr tigris withr]; }; + PLFD = derive2 { name="PLFD"; version="0.1.1"; sha256="0zzvrhjv7jxil326sqp0xmna0lc708wx1wv33qf0jf1ggr4hhqqm"; depends=[mathjaxr Rcpp RcppArmadillo]; }; PLIS = derive2 { name="PLIS"; version="1.1"; sha256="0b81s7677wglqvv1b5lx8k2iaks09kz0wrl07245a7j2pk9nxv7p"; depends=[]; }; PLMIX = derive2 { name="PLMIX"; version="2.1.1"; sha256="05mnzsi7y71cvg50qx8hp4m31gqslldl34k41r1f8npyb6ldpdca"; depends=[abind coda foreach ggmcmc ggplot2 gridExtra gtools label_switching MCMCpack PlackettLuce pmr prefmod radarchart rankdist rcdd Rcpp reshape2 StatRank]; }; PLNmodels = derive2 { name="PLNmodels"; version="0.11.4"; sha256="13yv6jwayl9d6iwllidn7hh52nybajvwfxg71dy4dh5y3lxpr0ib"; depends=[corrplot dplyr future future_apply ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr purrr R6 Rcpp RcppArmadillo rlang tidyr]; }; PLRModels = derive2 { name="PLRModels"; version="1.1"; sha256="0dwnzfw7a1cxz9s00kxf19jmjsc8cy6cc9q2mjqf8z7690wrg7hb"; depends=[]; }; - PLSbiplot1 = derive2 { name="PLSbiplot1"; version="0.1"; sha256="1l8d1k913ic0qwxvrrd447p5ni3mzc6v9lv45b7vqrpzkxdci6gy"; depends=[]; }; PLmixed = derive2 { name="PLmixed"; version="0.1.5"; sha256="03ivginsg1zhdxv5bzzmh6mxjz2b6qi8p4cq7sfm5q4llkld46x6"; depends=[lme4 Matrix numDeriv optimx]; }; PLordprob = derive2 { name="PLordprob"; version="1.1"; sha256="1g23h3121g9csr85falm6vgzbva42wz3skhfr2rxmvlc3ca4afyp"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.2.1"; sha256="1rhiylm3jfarnqdkv7nwg536sgsa30ic80dk9byks9w0wf4mn59s"; depends=[]; }; PMCMR = derive2 { name="PMCMR"; version="4.3"; sha256="09bvdj2h1086r2cgy3myrhlylplxxlliv8nwx09c8kb1vn02i2ij"; depends=[]; }; PMCMRplus = derive2 { name="PMCMRplus"; version="1.9.0"; sha256="11vqz2pqjg5id2r19x5x56riddj6ni8qwh2g8yb6681l13wjkqa3"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; - PML = derive2 { name="PML"; version="1.2"; sha256="0r4mfnkbg7chrnm3lb78hjcz25fal6vvvqwvnzvicl46mdhl94yb"; depends=[dplyr rbokeh tibble tidyr]; }; - PMwR = derive2 { name="PMwR"; version="0.16-0"; sha256="167npqrmclvn1sawrcpwi40k3xrxww48i2cbvs33njyfrq2k8shb"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.6.4"; sha256="0vy3cm68k21lwmdxi5j5k3dwgfc36xisf4s3y0vha82rj4naw3vs"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; + PMwR = derive2 { name="PMwR"; version="0.16-1"; sha256="0xyd1k7g3kasyrdcbwbbbk6h7hqah53kjayqk885534961zx6nlx"; depends=[datetimeutils fastmatch NMOF orgutils textutils zoo]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.6.5"; sha256="0lmznymj95vfyn0c4ga2z0mwfmrjvyr7255silq69w2xq7j8hfrl"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; + PNSIBGE = derive2 { name="PNSIBGE"; version="0.1.4"; sha256="04v2bjqp41z0xigndszi9kiii0r9gpzczd00saibgm0335xmhwdn"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; PNWColors = derive2 { name="PNWColors"; version="0.1.0"; sha256="1phplnclkficfv8s6wsyrckk4ixzbayiy5iix6dddg40485l9nyj"; depends=[]; }; PO_EN = derive2 { name="PO.EN"; version="1.0"; sha256="1b4vcj6dnfji99nlskjvls996cmb1b2s3mfdammi07sdx625pvji"; depends=[glmnet pROC PUlasso Rcpp RcppArmadillo]; }; POCRE = derive2 { name="POCRE"; version="0.5.0"; sha256="0aph1lmb0xkzm4l4ah2wrx13d138igf4k4w9wb9lca4vv6m7xzqf"; depends=[EbayesThresh ggplot2 pracma]; }; POD = derive2 { name="POD"; version="1.2.0"; sha256="1xg2xzfmzg2qrwd02xy4fwsfmccigw6lm5266z6w1kxzb7p7bbw0"; depends=[]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; - POFIBGE = derive2 { name="POFIBGE"; version="0.1.2"; sha256="03yqq4n0r4smmhqkq7s6q5q1dzimgfy5s9369fdwi9bpijk4arn9"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; + POFIBGE = derive2 { name="POFIBGE"; version="0.1.3"; sha256="1g7mfyy3pwr98hqs5npz2vl5fl0nmzk9d72xyng2czkp738n6y54"; depends=[dplyr httr magrittr projmgr RCurl readr readxl survey tibble timeDate]; }; POINT = derive2 { name="POINT"; version="1.1"; sha256="0bkrsvcmm7927d7c56wr804a2wv5c1dn8y8zhf76433ckj45068x"; depends=[CompQuadForm Matrix rARPACK]; }; POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; }; POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; }; @@ -3307,22 +3424,23 @@ in with self; { POT = derive2 { name="POT"; version="1.1-7"; sha256="1xxm293lmj22dsiaimivpd90xpwnrr36xa371zg6k6w05q4jjfn3"; depends=[]; }; POUMM = derive2 { name="POUMM"; version="2.1.7"; sha256="0pwa97sffb571nfqnbc35dj9lr8z07wjsjnwibj9dhj2dr5b2cfp"; depends=[adaptMCMC ape coda data_table foreach ggplot2 lamW Rcpp]; }; POV = derive2 { name="POV"; version="0.1.4"; sha256="0mqhi410rwpgr6x5h57wqg0f5k01vva0c280zlfpmf8php121x7j"; depends=[broom formula_tools]; }; - PP = derive2 { name="PP"; version="0.6.2"; sha256="1y6f8pnvdp59xnm0vh1rjhcxy3nyd3il7r76yyrrfamdr42hh8lc"; depends=[Rcpp]; }; + PP = derive2 { name="PP"; version="0.6.3-11"; sha256="1z7v5jiljm534lhr92vz9z3cafwcp6hdxyrr1nhli2arxc1nin76"; depends=[Rcpp]; }; PP3 = derive2 { name="PP3"; version="1.2"; sha256="1g36al9w1rxyhfzbvpw9siqq57h2xl0zr94wysz8i0jzqkkqkrvf"; depends=[]; }; PPCI = derive2 { name="PPCI"; version="0.1.5"; sha256="141811iq0g2rq7lxpz9a44kyjfylj85yqgcjq7b23xfg2wbcp8dd"; depends=[rARPACK]; }; PPMR = derive2 { name="PPMR"; version="1.0"; sha256="07fky5xc1dmmn23wwdjm46c86i7q20dv5f2147828v52hhky873g"; depends=[Rcpp RcppArmadillo]; }; PPQplan = derive2 { name="PPQplan"; version="1.1.0"; sha256="072r7myqsnpyla37q6bj9glwvbygb9g8xkl60q055yzxmfh4rsbr"; depends=[ggplot2 plotly]; }; PPRL = derive2 { name="PPRL"; version="0.3.6"; sha256="08z7fnvz9wdsdba6n19qxg6n32azka9890w16jj7qpv25bpkqvl1"; depends=[Rcpp settings]; }; - PPTcirc = derive2 { name="PPTcirc"; version="0.1.0"; sha256="082w0p8f1yacqjid017hhkk2946z7g5wf86af01cb26dhss0y9sy"; depends=[circular progress]; }; + PPTcirc = derive2 { name="PPTcirc"; version="0.2.0"; sha256="19fijgia3pahr41d6z5d5irx92a6118705pw0zvzmyla26z9vqsf"; depends=[circular progress]; }; PPforest = derive2 { name="PPforest"; version="0.1.1"; sha256="0iplbw5b2vhqbp6gc123ykzmilwa80akljkv3jzfmi90ckm4k08m"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; }; PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.4"; sha256="008hlgi56p9wydpsb2f1dxi4slml7p417c34lw00hivbl53d6x97"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; - PQLseq = derive2 { name="PQLseq"; version="1.2"; sha256="0md6s7yb24zq74b12ackhh1yggyfsg3226acwfaf1pb3l4yvway4"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; + PQLseq = derive2 { name="PQLseq"; version="1.2.1"; sha256="0lyynzvv7n1igzfrw52021bnxprqcm2hjxmlrsxkx4898ca46g60"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; PRDA = derive2 { name="PRDA"; version="1.0.0"; sha256="1lklwfakd54ylm5gizq36ng6498c2izapsz9yz2a95cjf860rr23"; depends=[MASS pbapply Rcpp RcppArmadillo]; }; PREPShiny = derive2 { name="PREPShiny"; version="0.1.0"; sha256="0zsg07y6nhp2lma3pdz8xd981y3mh8k21il5jv0inma1d1xr4g3f"; depends=[dplyr psycho rmarkdown shiny]; }; PRIMAL = derive2 { name="PRIMAL"; version="1.0.2"; sha256="04fn0c10v9ai7vrrd4qr84rid3x42wq749rn5p1i6nkvmjv3dnhs"; depends=[Matrix Rcpp RcppEigen]; }; PRIMME = derive2 { name="PRIMME"; version="3.2-1"; sha256="13a62x095fm5sz02hdsb2x7msdp4arf8lcy94br2bdd1yc96q79z"; depends=[Matrix Rcpp]; }; PRISM_forecast = derive2 { name="PRISM.forecast"; version="0.2.1"; sha256="07kq6fprbj8zccs6cx1aiy5mrcg77b0fh42zvg2pimbvr8cqhy31"; depends=[glmnet xts zoo]; }; PRISMA = derive2 { name="PRISMA"; version="0.2-7"; sha256="0sk2d07m8rhipa0kdbaf8ngryda6f1ihp5akpnyw2llajf0x8as5"; depends=[ggplot2 gplots Matrix]; }; + PRISMA2020 = derive2 { name="PRISMA2020"; version="0.0.3"; sha256="1qbhgdv6l4aafqrxvxrrjinsnnhy8pj1lan54ylzzj1a0hyy4mkl"; depends=[DiagrammeR DiagrammeRsvg DT htmltools htmlwidgets rio rsvg scales shiny shinyjs stringr webp xml2]; }; PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.1.1"; sha256="1vvab8h71g8c910s2h4d12qafqdncfzmsh5f1b4m79plpqi3s49z"; depends=[DiagrammeR]; }; PROBShiny = derive2 { name="PROBShiny"; version="0.1.0"; sha256="17p6pb8nwq36ha697f2lf8nwzj5cylmh8rdzyag49ks5hi9painb"; depends=[epitools LaplacesDemon rmarkdown rpivotTable shiny shinyMatrix]; }; PROJ = derive2 { name="PROJ"; version="0.4.0"; sha256="1rqw28qqcyzla3ssif9jghvv0nyms9riabj2lxhlx1l3rbz0rsfx"; depends=[]; }; @@ -3332,18 +3450,18 @@ in with self; { PROreg = derive2 { name="PROreg"; version="1.1"; sha256="0jws41hgrpcih5ispp6f627f81sjbdygzgjbw4gawf31n5z8pi5a"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; PROscorer = derive2 { name="PROscorer"; version="0.0.1"; sha256="0mgj0mi0vzdk0agimsx4k9i4bss0j5lqiayzhldr1hrqrx2a4f3d"; depends=[PROscorerTools]; }; PROscorerTools = derive2 { name="PROscorerTools"; version="0.0.1"; sha256="1vliffkfqdn5l96bncfgayv19i20kmawlxi8q853wamj6npdpv5r"; depends=[]; }; - PROsetta = derive2 { name="PROsetta"; version="0.3.0"; sha256="0w4zr4m50k013lc50k6g8wa5aqynsxa3m1pkachx71pwni6sjcqq"; depends=[equate lavaan mirt mvnfast plink psych]; }; + PROsetta = derive2 { name="PROsetta"; version="0.3.2"; sha256="148kylibzzqcryrrfxkybpyb4bpywdjdg9lvxar7b2qhwfb5ff1b"; depends=[equate lavaan mirt mvnfast plink psych]; }; PRROC = derive2 { name="PRROC"; version="1.3.1"; sha256="1m28h8pcd78049lz2qixhkcr9h5b3jik3maqzfbvq9y58z71i4a7"; depends=[]; }; PRSim = derive2 { name="PRSim"; version="1.3-1"; sha256="1iq81vdxwd504cqjn243hs8x8ph7yvf06gj4amf7cgg1j6862d35"; depends=[goftest homtest lmomco mev splus2R wavScalogram]; }; PReMiuM = derive2 { name="PReMiuM"; version="3.2.6"; sha256="15m37k8pnc4i4gb0mgk7xas0amkg2iqb9xy5wnwmgpa0vmxy0nn4"; depends=[BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; - PResiduals = derive2 { name="PResiduals"; version="1.0-0"; sha256="0rfi8y12cz6h8bm9715ppq3px4g123k0rlrri4py8brca40smb69"; depends=[Formula MASS rms SparseM]; }; + PResiduals = derive2 { name="PResiduals"; version="1.0-1"; sha256="0mq16cs07hw5c9jj08vpgbb15xvjvz9h0npsbqphiibsb6ca5fwb"; depends=[Formula MASS rms SparseM]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; PSCBS = derive2 { name="PSCBS"; version="0.65.0"; sha256="16irvlc3ds7p03racjzyljqsc43bbwng3zsb0bmrkibmadfhcr9k"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; }; PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; }; PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; PSPManalysis = derive2 { name="PSPManalysis"; version="0.3.4"; sha256="1w51b0dck9b14vnk91ihrm3z574m65b7mdi29jwjsj5v0vh1gang"; depends=[pkgbuild rstudioapi]; }; - PSS_Health = derive2 { name="PSS.Health"; version="0.1.6"; sha256="00irpkq0py5sw0r3y1krmkav6xv6kmiirf7m737v0k4pr62wq659"; depends=[DT easypower EnvStats epiR ICC_Sample_Size kappaSize longpower plotly powerMediation powerSurvEpi presize pROC pwr pwr2 shiny shinycssloaders shinyFeedback shinyhelper tidyverse writexl]; }; + PSS_Health = derive2 { name="PSS.Health"; version="0.2.1"; sha256="028nnk6xdbyy22chgwv4i20s2n2wz34g4wsf08imnvfnvx6ncyzw"; depends=[DT easypower EnvStats epiR ICC_Sample_Size kappaSize longpower plotly powerMediation powerSurvEpi presize pROC pwr pwr2 shiny shinycssloaders shinyFeedback shinyhelper tidyverse writexl]; }; PSSIM = derive2 { name="PSSIM"; version="0.1.0"; sha256="144lh31b1c4ycq0wrgf9745q0c8b5sfnmrd0f7vwx95i86bzr3mj"; depends=[]; }; PSSMCOOL = derive2 { name="PSSMCOOL"; version="0.2.1"; sha256="0ixxaxgpngi27r3zpqzrk5df8aqmrs4iwiyfrgg1ab1kjd1hnpk4"; depends=[dtt gtools infotheo phonTools]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; @@ -3351,7 +3469,7 @@ in with self; { PSweight = derive2 { name="PSweight"; version="1.1.4"; sha256="06na7w1wdh4f1qlhiazsl192ap4rz6anp108s3g7p5prw0lxq1j1"; depends=[gbm ggplot2 MASS nnet numDeriv SuperLearner]; }; PTAk = derive2 { name="PTAk"; version="1.3-34"; sha256="0ylnag492v1n0pmzsz73w12frhv8c3r3dxgarf58ny0ir0i0ywvl"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.7"; sha256="1azkrij4kfmvp03lnzm88gwgvz8g54jq94j0qg8ynxvyjzrppc98"; depends=[doParallel foreach survival]; }; - PTXQC = derive2 { name="PTXQC"; version="1.0.9"; sha256="195zw3c5lvgp5237anj37wzqj9wnkpvabqr1q3whj0lvh01lpghb"; depends=[data_table ggdendro ggplot2 gtable jsonlite kableExtra knitr ontologyIndex plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; + PTXQC = derive2 { name="PTXQC"; version="1.0.10"; sha256="1lil15ra57zci88yxrihisalx0jgql2ngyflqf86i950r6m4xlri"; depends=[data_table ggdendro ggplot2 gtable jsonlite kableExtra knitr ontologyIndex plyr RColorBrewer reshape2 rmarkdown seqinr UpSetR yaml]; }; PTwins = derive2 { name="PTwins"; version="0.1.1"; sha256="166mc7w52n9d3n72h5jvvhbki87prkils3yigdf57dn9pyixrd66"; depends=[]; }; PUPAIM = derive2 { name="PUPAIM"; version="0.2.0"; sha256="1ky6f4yhm3hjrfxwk8vfalzzjgkq1922my26w457q8nfng7f2m53"; depends=[Metrics minpack_lm nls2]; }; PUlasso = derive2 { name="PUlasso"; version="3.2.4"; sha256="0mcmya0a5wzmssq05vpmkx9icfrq49kc0dc9ri3d9kx4w0sabffh"; depends=[doParallel foreach ggplot2 Matrix Rcpp RcppEigen]; }; @@ -3379,15 +3497,15 @@ in with self; { PamBinaries = derive2 { name="PamBinaries"; version="1.4.0"; sha256="09b1964k5fipilzzfn8fzrpa29wdbakprzd7gcz04ba29jp1f89g"; depends=[dplyr ggplot2]; }; PanCanVarSel = derive2 { name="PanCanVarSel"; version="0.0.3"; sha256="06xkzg2kvyr6ivm1z71x2pk20j37h36sx6kf4kmc8q50cq73k9jl"; depends=[Matrix msm mvtnorm smoothmest]; }; PanJen = derive2 { name="PanJen"; version="1.6"; sha256="18cl9rls98v286kk6lyxxws3w59zpzgmqi5250gdgcf71xy2lhvm"; depends=[mgcv]; }; - PandemicLP = derive2 { name="PandemicLP"; version="0.2.1"; sha256="1ilxxzbynh7dmc9lmyzp1hb3305w9fgvrabm1q5pxa46l41z40dc"; depends=[BH curl dplyr plotly Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; + PandemicLP = derive2 { name="PandemicLP"; version="1.1.0"; sha256="1na7d18x257xp0617pb9nr26sc53hfc3lm0f5p1fwvmppj03sgng"; depends=[BH covid19br curl dplyr plotly Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; PanelCount = derive2 { name="PanelCount"; version="1.0.9"; sha256="1b6c83qypjc3ylvhh24xm4pjk8w34s24v0i9ddlmg92f1518hlkj"; depends=[Rcpp RcppArmadillo statmod]; }; - PanelMatch = derive2 { name="PanelMatch"; version="1.0.0"; sha256="02nsi5bhzqdn3v164f70xs0lll929gi602jw2b1xza7wcszdchfd"; depends=[CBPS data_table ggplot2 MASS Matrix Rcpp RcppArmadillo RcppEigen]; }; + PanelMatch = derive2 { name="PanelMatch"; version="2.0.0"; sha256="0974f0jfigybclvbkdp5ma57fjrx8qz7dca3c09klw3xkmlfsxhb"; depends=[CBPS data_table ggplot2 igraph MASS Matrix Rcpp RcppArmadillo RcppEigen]; }; Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; PantaRhei = derive2 { name="PantaRhei"; version="0.1.2"; sha256="0lv04aa70yd5gr0zfh2gmah4d4h3kw0lym6284akcvll8mhdi8dd"; depends=[]; }; ParBayesianOptimization = derive2 { name="ParBayesianOptimization"; version="1.2.4"; sha256="0x6r54gawbfa75qmadhbxw9mgbinwxl84h54w6j6iwg3jbyrnzp8"; depends=[crayon data_table dbscan DiceKriging foreach ggplot2 ggpubr lhs]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; - ParallelDSM = derive2 { name="ParallelDSM"; version="0.1"; sha256="0pgkcc2a3k1h0n997m9x0zj4adv4i0q6qfh7m25l3f80kzlxhqdi"; depends=[caret geoR gstat quantregForest randomForest raster rgdal snowfall sp]; }; - ParallelLogger = derive2 { name="ParallelLogger"; version="2.0.1"; sha256="0vvilx5rcr00nl9gsjynx6dddc692llq63v3mhj3zlmblifxwkyr"; depends=[jsonlite snow xml2]; }; + ParallelDSM = derive2 { name="ParallelDSM"; version="0.3.1"; sha256="02m7hvjjzwxz1apw4dv8ypxkd8i41if5s83fp2algf4kyv2s44nx"; depends=[caret geoR gstat pryr quantregForest randomForest raster rgdal snowfall sp stringr]; }; + ParallelLogger = derive2 { name="ParallelLogger"; version="2.0.2"; sha256="03wpcdafxfg2k25qdm043brp72qpypzzps4ayzdar85khi5g7znj"; depends=[jsonlite snow xml2]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; ParallelTree = derive2 { name="ParallelTree"; version="0.1.3"; sha256="1h53qwhc63fglm452b3by7f3g6f3hyqwkmwmbdqdb9rv3j4gvnvg"; depends=[ggplot2]; }; ParamHelpers = derive2 { name="ParamHelpers"; version="1.14"; sha256="1sx2ddm8hwvvmk0z65wa689w80py3fny82zjd4d29qwxlv854xmi"; depends=[backports BBmisc checkmate fastmatch]; }; @@ -3400,22 +3518,22 @@ in with self; { Patterns = derive2 { name="Patterns"; version="1.3"; sha256="1jmj7jr7q5f6iqrrlv6dz0n2igbppnxfvbdh5nwf5bndyxlldqxn"; depends=[abind gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls plotrix SelectBoost survival tnet VGAM WGCNA]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; - PeakError = derive2 { name="PeakError"; version="2017.06.19"; sha256="1d4v7s478zjz42dm6ps4nnqqyyqv84dgmzn1bp1a4qwnfv9vmfg7"; depends=[]; }; + PeakError = derive2 { name="PeakError"; version="2021.7.1"; sha256="0rsh81p0w11zp8rgxx9cm8537gxhf9hx6xizpbflfx60xhr96is5"; depends=[]; }; PeakSegDP = derive2 { name="PeakSegDP"; version="2017.08.15"; sha256="1ndf4d4ikcyqi0k51kil2jw777z4c1m4pda3dahrjmjyz0jhrhkw"; depends=[]; }; PeakSegDisk = derive2 { name="PeakSegDisk"; version="2020.8.13"; sha256="11nw8x0fr6474yvcf3fhyjql91vknmdsdvx1q1dwblyqd10f120h"; depends=[data_table]; }; PeakSegJoint = derive2 { name="PeakSegJoint"; version="2018.10.3"; sha256="0f0dw6swhhf301j4ci3rs8cmzd39dcjlb0kqxpdh7f00gp3qn7da"; depends=[PeakError penaltyLearning]; }; PeakSegOptimal = derive2 { name="PeakSegOptimal"; version="2018.05.25"; sha256="0j39jzy4r0h787vs3klgbpcmb096ds3hzhvv5w3xs53kl0qkypj4"; depends=[penaltyLearning]; }; - PearsonDS = derive2 { name="PearsonDS"; version="1.1"; sha256="0rqh9ji0bah3n1c6fcg7krgqs65qla9p3xrnc4jr7va6ph104im9"; depends=[]; }; + PearsonDS = derive2 { name="PearsonDS"; version="1.2"; sha256="0hdlfgsk9z54bjjbpqbz5x8k6jnnmwh5ik4c5mlzrmzmcbfmb7mx"; depends=[]; }; PearsonICA = derive2 { name="PearsonICA"; version="1.2-4"; sha256="0jkbqha1nb9pf72ffki47wymsdmd50smkdhvpzvanv4y2rmqfhvg"; depends=[]; }; PedCNV = derive2 { name="PedCNV"; version="0.1"; sha256="09qxcjzwdgzdkbj28rzmfv7k3q2qsiapnvx3m45a835r57h5gynp"; depends=[ggplot2 Rcpp RcppArmadillo]; }; - PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.3"; sha256="19dvvl4q20zacpycxndvlck6h060gir07v2ag98bwn5p6dsg7ziq"; depends=[lmtest sandwich]; }; + PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.5"; sha256="0cdv7ndbjxzaayxkrxh99jsyivlipbnipv21d4rmf8j8ssfq74r5"; depends=[lmtest sandwich]; }; PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PenIC = derive2 { name="PenIC"; version="1.0.0"; sha256="0vcqawmbm8z6lkcxfq1b2png9viz5q669npbv0s7dn6smwhanlzz"; depends=[MASS Matrix numDeriv]; }; PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; - Peptides = derive2 { name="Peptides"; version="2.4.3"; sha256="1ml1dnk4bigv9gfxx9xpxp9b8id2nid3gngmza9dz9zfcy5dbc1f"; depends=[Rcpp]; }; + Peptides = derive2 { name="Peptides"; version="2.4.4"; sha256="1yppbcsa0rb74mmspb6f6c9slcjy5x6c484dk9gy48sg33chp1zw"; depends=[Rcpp]; }; PerFit = derive2 { name="PerFit"; version="1.4.5"; sha256="0ngxwr4gcamyxhn96mr1pl319fiwv2xzyrc7lhbwsx28b7rpqamc"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; PerMallows = derive2 { name="PerMallows"; version="1.13"; sha256="0ny2vc8f0npixaw1kp2d93xr4g46nsg8jjwvi6afv9xjvaz0i6wy"; depends=[Rcpp]; }; - Perc = derive2 { name="Perc"; version="0.1.5"; sha256="1097cdx69jliwk1d5yv6v0igmqk4dwgypcb4k9dnqla19rbxx8xc"; depends=[]; }; + Perc = derive2 { name="Perc"; version="0.1.6"; sha256="1nwbj56m7pxrg8dyv36501b0lvpq8gbhcr07vs4nps8n3rqwwg81"; depends=[]; }; PerfMeas = derive2 { name="PerfMeas"; version="1.2.1"; sha256="1x7ancmb41zd1js24rx94plgbssyc71z2bvpic6mg34xjkwdjw93"; depends=[graph limma RBGL]; }; PerformanceAnalytics = derive2 { name="PerformanceAnalytics"; version="2.0.4"; sha256="0ci26hsj4wnw9g0mh4vrn0cg986cpcpx169rvw6v6rbnjxq718bq"; depends=[quadprog xts zoo]; }; PeriodicTable = derive2 { name="PeriodicTable"; version="0.1.2"; sha256="133rwbvapk99dmh3vi8p7sa81d7hjmy0g4a5hcmwr3mdq8jzgwrj"; depends=[]; }; @@ -3423,9 +3541,10 @@ in with self; { PerseusR = derive2 { name="PerseusR"; version="0.3.4"; sha256="1k03flbnjndx5mm26hysk64z89858m50kjs8gyldm4s5f09iny6p"; depends=[Biobase plyr stringr XML]; }; PersianStemmer = derive2 { name="PersianStemmer"; version="1.0"; sha256="1dpfkafijg7g7hzka93l1ymq5rcnjsfgvkvbpdx3vjnid05kh4v1"; depends=[]; }; PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; }; - PesticideLoadIndicator = derive2 { name="PesticideLoadIndicator"; version="0.0.1"; sha256="1sac7a4dkm4qr6igdh4ba4f65c7f47m80lyr1gw39xb0ff806p0d"; depends=[readxl stringr]; }; + PesticideLoadIndicator = derive2 { name="PesticideLoadIndicator"; version="1.2.0"; sha256="1r85rixflkp6rrjxz44msymw44braych3wcs175lv33snf8n6l3n"; depends=[dplyr magrittr readxl rlang stringr]; }; PetfindeR = derive2 { name="PetfindeR"; version="2.1.0"; sha256="1pb3mqv4pxl971j210m7vwhz9qqbhb7l5fpmb1vjwkc5hx11zh9l"; depends=[R6]; }; PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; + PhageCocktail = derive2 { name="PhageCocktail"; version="1.0.0"; sha256="1hkwp0vscmpfa70qhd9gj7x2r9cpx9cm51l11l8fdammgylmlfyy"; depends=[bipartite factoextra readxl RJSONIO smerc stringr]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; Phase123 = derive2 { name="Phase123"; version="2.1"; sha256="0bz867wsnrflzlzrql1vgacymx70rb9wik9jw3g34i2vigpl8x8i"; depends=[Rcpp RcppArmadillo survival]; }; Phase12Compare = derive2 { name="Phase12Compare"; version="1.5"; sha256="0n9rjgdllpnj451a8d4p8x3mjf23czcmk7cn1c9v3l7mg4jn18h2"; depends=[mvtnorm Rcpp RcppArmadillo]; }; @@ -3433,19 +3552,22 @@ in with self; { PheNorm = derive2 { name="PheNorm"; version="0.1.0"; sha256="10223yfaajzq1ip5qj3kk6iyjzrbb619jkrsxawb0dpkrj56d8v7"; depends=[]; }; PheVis = derive2 { name="PheVis"; version="1.0.2"; sha256="0pb6lxyz0ikgl64872dqjk1zj7pa793ggrp53hrg2y5m76wn8drr"; depends=[dplyr ggplot2 glmnet knitr lme4 purrr randomForest Rcpp tidyr viridis zoo]; }; Phenotype = derive2 { name="Phenotype"; version="0.1.0"; sha256="0bfg2vk35hrfzmpjpnv3yhnsfr17505c49msbppqrrbpw5wgawy5"; depends=[lme4 tidyr]; }; - PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.3.3"; sha256="1micildhgqx4h52927p68g6jvw2rif6maf90d3dzvn76ll2zbpwh"; depends=[cowplot data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; + PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.3.4"; sha256="19c79kls6i1qpsk41lp8whva5in47m2wlr0v3ggw5bblp4fkd43m"; depends=[cowplot data_table dplyr ggplot2 Hmisc mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; + PhitestR = derive2 { name="PhitestR"; version="0.1.0"; sha256="0xk1jpxmqvqqfiaxd43xf5h9g7yxirkqji1g2sa8avd1h5bfqyk8"; depends=[fitdistrplus Seurat]; }; + PhotosynQ = derive2 { name="PhotosynQ"; version="0.2.3"; sha256="10n06sfbwv5w96m3yv5ws7yddfv2n8pp1rc730870wiavl6cbn63"; depends=[getPass httr]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; PhySortR = derive2 { name="PhySortR"; version="1.0.8"; sha256="19426xjdii74qds0wmq5sa88zys81nyqb9lvf9pfihbjgrjr770a"; depends=[ape phytools]; }; PhyloMeasures = derive2 { name="PhyloMeasures"; version="2.1"; sha256="01axs78s10y1bkx8dbs9vvnphdzik7hpibkwyib1x9mznmyg90hr"; depends=[ape]; }; - PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.4.0"; sha256="14a1lczwr8xhv27wqc88raj3yhy8gvflvxjrx8f5hlq15y3wfp4w"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; + PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.5.0"; sha256="1fcd6ssjgs83106zlxhqdsbcm9478b1wnhzrlf2i22i1b3wid1pw"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.1"; sha256="0ww9gcni9f0mwya1d3v45wazrss7lq8b75xcp4fb4kxwbh9s35kw"; depends=[chron lubridate stringr]; }; PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.2-4"; sha256="0b27prkv3x6v2afz0y53ccs9scibpc7nj54n0hpd9fgn1wyg4c40"; depends=[]; }; PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.4"; sha256="023hq0gg1vi0j3yf8p5lisgs8wfp5qwyd4akxxzx7wad2985gxb3"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0.3"; sha256="0jspc19fn1mqv3zjr89sy7rqbbyjk3ij3rhrg2dsw167w63lpykx"; depends=[Rcpp]; }; PivotalR = derive2 { name="PivotalR"; version="0.1.18.5"; sha256="1xcr7769d9jixq0lbc89jqzzxnnzxb8gjlws2l6cjm40hcid2yc9"; depends=[Matrix semver]; }; - PlackettLuce = derive2 { name="PlackettLuce"; version="0.4.0"; sha256="048zajpv2lbsbzdya16lpk47xygjvmy3il3g8hfq255xwiv5v07k"; depends=[CVXR igraph Matrix partykit psychotools psychotree qvcalc R6 RSpectra sandwich]; }; + PlackettLuce = derive2 { name="PlackettLuce"; version="0.4.1"; sha256="1l3lh4nvadr4qrpx8mdw7bgaq1w9fhkkaz42pc9hkwbp76brb52i"; depends=[CVXR igraph Matrix matrixStats partykit psychotools psychotree qvcalc R6 RSpectra sandwich]; }; PlaneGeometry = derive2 { name="PlaneGeometry"; version="1.2.0"; sha256="19ynvclgj2148gphqq825byj6xdvjr5i15h448505gv4j1viw0cx"; depends=[gsl R6 sdpt3r stringr uniformly]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; + PlanetNICFI = derive2 { name="PlanetNICFI"; version="1.0.3"; sha256="03nm6lrn0gm3fl8v7mz2pglr9gbh7vfh03j1pfqyfk0k58a92a48"; depends=[data_table gdalUtils glue httr raster sf]; }; PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.7.2"; sha256="0qra7q2pzw212qylyrfhv6zjcsldfw84b93cari0qjqnw4gyfph2"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; }; Plasmode = derive2 { name="Plasmode"; version="0.1.0"; sha256="1qcni9zdckhsnw616jn7rdfd09kbl5wd4hljdja0w73jz1wd1z14"; depends=[arm epiDisplay foreign gbm glm2 lattice latticeExtra lme4 MASS Matrix mgcv nlme nnet RColorBrewer survey survival twang xtable]; }; @@ -3454,6 +3576,7 @@ in with self; { PlotPrjNetworks = derive2 { name="PlotPrjNetworks"; version="1.0.0"; sha256="13kbyx2phxb3kss6l32f7krf4k5i350indlsmbhav686v0h3nsgp"; depends=[ggplot2 reshape2]; }; PlotRegionHighlighter = derive2 { name="PlotRegionHighlighter"; version="1.0"; sha256="0n1nkfr3sdaq6f5p9kgx4slrsvhpdbax3rinrkfkb1vnjj4swj77"; depends=[]; }; PoA = derive2 { name="PoA"; version="1.2.1"; sha256="0y8aqz1ainxdglxlfp9iqhvkmirpmc7dvwrcxz2l8lln86yrfqx6"; depends=[dplyr nloptr pracma tibble]; }; + PoDBAY = derive2 { name="PoDBAY"; version="1.4.3"; sha256="1c1dmggcc8k4h56063r97gjavd44llc51j54qs1wck9zir414i8w"; depends=[dplyr ggplot2 Rcpp]; }; PoSI = derive2 { name="PoSI"; version="1.1"; sha256="1xwlj8dibaik37z6vj9q9vawavi7d49906wvxdd4drjzxzapq4ng"; depends=[]; }; PogromcyDanych = derive2 { name="PogromcyDanych"; version="1.7"; sha256="1fld65ksw47hvp0k1mjll0pxcpf0cjdqj5qhjx88mrbsr2f1y7x4"; depends=[dplyr SmarterPoland]; }; PoiClaClu = derive2 { name="PoiClaClu"; version="1.0.2.1"; sha256="1q89b0nypz2iivmgwg1nb1l7p285wy00s40j3qp8zc78ra1rjhyx"; depends=[]; }; @@ -3464,20 +3587,20 @@ in with self; { PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.6.3"; sha256="02v9p82z85vkbhap2xn1rz8ibvvavsq8mgxxzicl749j4j9hcrmf"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; PoisNonNor = derive2 { name="PoisNonNor"; version="1.6.3"; sha256="1572ma1vk17gp2j9fvmbiaxmnmb773mw15z6mlcf1slgpayp1ldb"; depends=[BB corpcor MASS Matrix]; }; PoisNor = derive2 { name="PoisNor"; version="1.3.3"; sha256="1qi54fg2b1qc305kaihfwr2dkh3b3dd6l67yp9gi61n29kfxaqmf"; depends=[corpcor Matrix mvtnorm]; }; - PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.2.3"; sha256="0lnsgjs5v1pha6vzdc2387mjscm8519dxhjl8q8lrdrjws3rh5jy"; depends=[Rcpp]; }; - PoissonPCA = derive2 { name="PoissonPCA"; version="1.0.2"; sha256="0rb30l0x8knwvh8li62cfxms9b20db77g4r8cwgwasb9jjljxv3s"; depends=[]; }; + PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.2.4"; sha256="0nx1xqqwsxrfyzrxl3lqmd7d7ljgp6k3z3cw49xbc2z6gbizgm7g"; depends=[Rcpp]; }; + PoissonPCA = derive2 { name="PoissonPCA"; version="1.0.3"; sha256="0hdfnq427cywkpb34nj8kdjrc3yligzqag0729qnhh90si0ad036"; depends=[]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; PolicyPortfolios = derive2 { name="PolicyPortfolios"; version="0.2.2"; sha256="1mfhyy4qyadk389jj6q8livfj45qdwb57wx74cg85jiqd2g19d90"; depends=[dplyr ggplot2 ineq mgcv reshape2 vegan]; }; - PolyHaplotyper = derive2 { name="PolyHaplotyper"; version="1.0.0"; sha256="1mzbg3br7zhdnpgzdr679k94q4y5ig0y4gqja5li1g195w58b7vd"; depends=[XML]; }; + PolyHaplotyper = derive2 { name="PolyHaplotyper"; version="1.0.1"; sha256="1sc1n42h78nyv004ddykvh1ljjczyiv5rl9sgxhi207lql1zd3wa"; depends=[XML]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; - Polychrome = derive2 { name="Polychrome"; version="1.2.6"; sha256="0363cgrbbva56146hr0dh7bj7g86c8c1rqh82rbqk7cam3an8g9a"; depends=[colorspace scatterplot3d]; }; + Polychrome = derive2 { name="Polychrome"; version="1.3.1"; sha256="044vbylgbqf0ccv4r15nmbw1vz0j95g67i6blw73hvbvbm6w5x4d"; depends=[colorspace scatterplot3d]; }; PolynomF = derive2 { name="PolynomF"; version="2.0-3"; sha256="067l71i2zjv6gvd0br2m034ls3r5lcmc0amml1qbj4wchd7mqlw9"; depends=[Rcpp]; }; Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; PoolTestR = derive2 { name="PoolTestR"; version="0.1.1"; sha256="1p6gg8npdw426irsai8y2bzblbpn4zjca3pyfzzgigy4hz89y1db"; depends=[BH brms dplyr lme4 progress Rcpp RcppEigen rstan rstantools StanHeaders stringr]; }; PooledCohort = derive2 { name="PooledCohort"; version="0.0.1"; sha256="1zf8waqiw4282iyr30byd7czrdnf9rvp3mra6b7slqqs1z53lhr2"; depends=[glue]; }; PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; - PopED = derive2 { name="PopED"; version="0.5.0"; sha256="1yzldm4mvg4i9xhx1wrb7wbmp15fqsa68grnjj29ig11gbivyfab"; depends=[boot codetools dplyr ggplot2 gtools magrittr MASS mvtnorm purrr stringr tibble]; }; + PopED = derive2 { name="PopED"; version="0.6.0"; sha256="0s8lr17s6w8isjig4z8jzgpnpsb1kg98d32y7kslbwzl08cbnza0"; depends=[boot codetools dplyr ggplot2 gtools magrittr MASS mvtnorm purrr stringr tibble]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; PopGenReport = derive2 { name="PopGenReport"; version="3.0.4"; sha256="0x9j9f9k65rfr4fxyrxqa9220psfh1bicls6vwbxmqsfdsfnvs0j"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; PopGenome = derive2 { name="PopGenome"; version="2.7.5"; sha256="0xdwgih1n7bkykbzrnp293yzrlj80vr2v6rlsww61nxlhynbh9yn"; depends=[ff]; }; @@ -3488,8 +3611,9 @@ in with self; { PortfolioEffectEstim = derive2 { name="PortfolioEffectEstim"; version="1.4"; sha256="1sfgkwyn7vfy3rqb1cglywiv5xmyxhzvj38vgrvfq5jf3hvzsg21"; depends=[PortfolioEffectHFT rJava]; }; PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; }; PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.1.1"; sha256="01fw1zr1gr6nlcgw8dlc66b3ygkl6w571lw73p13h0q17y1i872d"; depends=[Rsymphony]; }; + PosRatioDist = derive2 { name="PosRatioDist"; version="1.0.1"; sha256="11909qi7qm856nvpj1m25mpy8gig5dc3q2wc8rzjlxp8md5a8lax"; depends=[BMS mvtnorm NORMT3]; }; PostcodesioR = derive2 { name="PostcodesioR"; version="0.3.0"; sha256="1502dkkm0qnsdvw2ghi1qm2p9rlkw5n17pwz2s20ca9a6rnf4787"; depends=[httr]; }; - PosteriorBootstrap = derive2 { name="PosteriorBootstrap"; version="0.1.0"; sha256="0zzhz88f53l1nqynl3wq4yww9z1v354a16hhin4sdd7ha1iqi9cj"; depends=[dplyr e1071 ggplot2 gridExtra MASS Rcpp rstan StanHeaders tibble]; }; + PosteriorBootstrap = derive2 { name="PosteriorBootstrap"; version="0.1.1"; sha256="12ial0bcrh3k3z5927zh0bvd413jrz606b07jgbym87kb3n1fxbi"; depends=[dplyr e1071 ggplot2 gridExtra MASS Rcpp rstan StanHeaders tibble]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.7"; sha256="040wc7hxa8y6bm1rs7ip2skdxmmwksxkyb6xzqgdjp8m7a25fppb"; depends=[Rcpp RcppArmadillo]; }; Power2Stage = derive2 { name="Power2Stage"; version="0.5-3"; sha256="0fs6hkpfivc98dxnlmxqaxsr3bxvfqawjnwyw0qvans8m4wcq1kx"; depends=[cubature mvtnorm PowerTOST]; }; @@ -3499,6 +3623,7 @@ in with self; { PracTools = derive2 { name="PracTools"; version="1.2.2"; sha256="08s8pm55814w6mjz3q4n1bcxccmjypb5qiws5g8pcafl6dj7z0wh"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; PreProcess = derive2 { name="PreProcess"; version="3.1.7"; sha256="1fxzkmrj76mc94xdj7a0nq450021i1jxkigmh5jhrmamkp5581jf"; depends=[oompaBase]; }; + PreProcessing = derive2 { name="PreProcessing"; version="0.1.0"; sha256="08wrdg3q7r8h7lqn3yppl3qqlhnaak81vd9ymqlkzw92981rxxzx"; depends=[ggplot2]; }; PreciseSums = derive2 { name="PreciseSums"; version="0.4"; sha256="054y84w3i5yrq74w2hsdxz1z1glccy540dq4jxicnknkkp2c0nmx"; depends=[]; }; PredCRG = derive2 { name="PredCRG"; version="1.0.2"; sha256="0z84p8l2q66rapb9lhx8m8iadz3q989q5qkvcp8ylv80cz6qkibx"; depends=[Biostrings e1071 kernlab Peptides protr]; }; PredPsych = derive2 { name="PredPsych"; version="0.4"; sha256="00h4p1szqzh4a2kjvlriyinh330cfwxsrvs6fi089mr207q890vj"; depends=[caret e1071 ggplot2 MASS mclust party plyr randomForest rpart statmod]; }; @@ -3508,7 +3633,7 @@ in with self; { PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; PressPurt = derive2 { name="PressPurt"; version="1.0.2"; sha256="05kca0rlhlvhgnw3r3p4sh42zwvhrhcjdwz65ykp14jxybfhc8in"; depends=[data_table ggplot2 gridExtra reticulate]; }; PrevMap = derive2 { name="PrevMap"; version="1.5.3"; sha256="0pgrfrfw587vsci98lxd205r8wl7x7c9ns15ypnhwr8xaysdxnpf"; depends=[lme4 Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; - PriceIndices = derive2 { name="PriceIndices"; version="0.0.4"; sha256="10hdpv5y3hmlj484p3qn6mhirdl2gr4w3vjh97p971lfiaipjpb0"; depends=[caret dplyr ggplot2 lubridate reclin reshape strex stringr xgboost]; }; + PriceIndices = derive2 { name="PriceIndices"; version="0.0.5"; sha256="0ymvdcn7ijw015rb4ljx6q608fzk87z38k8qqgc30839i79vy7wi"; depends=[caret dplyr ggplot2 lubridate reclin reshape strex stringr xgboost]; }; PriorCD = derive2 { name="PriorCD"; version="0.1.0"; sha256="1mb50w2i8sfxjzqd5xnfysn3jnzkkyv6l8algxnp0xpyhcq41pfs"; depends=[dplyr igraph ROCR visNetwork]; }; PriorGen = derive2 { name="PriorGen"; version="1.1.2"; sha256="0qvdqqdy7wdwwcq95mkgfyf7xf6xlpwdfs3gq299yyv2ba57flnm"; depends=[rootSolve]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; @@ -3517,7 +3642,7 @@ in with self; { ProFit = derive2 { name="ProFit"; version="1.3.3"; sha256="0jrw0v7dg5mf4zxg7pqybh9qzsiqb3nnz8g5qlc4iz73mhr9gm2b"; depends=[celestial checkmate cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; ProFound = derive2 { name="ProFound"; version="1.14.1"; sha256="1p2mdy0z5p7as1x6vc572wjcl6f0acwgpvb39rmk2273kb1ldwz5"; depends=[celestial data_table FITSio foreach magicaxis RColorBrewer Rcpp]; }; ProPublicaR = derive2 { name="ProPublicaR"; version="1.1.1"; sha256="08bhqm64r79ywj394l1ywwcsjc79wzi85wlbp5xnr49bxzaysfp1"; depends=[config dplyr httr lubridate stringr]; }; - ProSGPV = derive2 { name="ProSGPV"; version="0.1.0"; sha256="017aqym6fp119zcz899nxsbg4q0qcahh6jjmn44ab8azlgr68dgc"; depends=[glmnet MASS]; }; + ProSGPV = derive2 { name="ProSGPV"; version="1.0.0"; sha256="1837p4vg1g4225rv55gaphma429j6pnfh078cxpv5ha2n0h1sfz3"; depends=[brglm2 glmnet MASS survival]; }; ProTrackR = derive2 { name="ProTrackR"; version="0.3.7"; sha256="15m8g9v254avi68qr7v5q4fzhclkv1q849sj69fs0c9qcli1x384"; depends=[audio lattice signal tuneR XML]; }; ProbBayes = derive2 { name="ProbBayes"; version="1.1"; sha256="0bkbqyrmpy9swaxsl91w6iiw81znjf1lk4b0vqgn6wdnrir6gkmn"; depends=[ggplot2 gridExtra LearnBayes shiny]; }; ProbMarg = derive2 { name="ProbMarg"; version="1.0.1"; sha256="02qc6c08vfg3inh14d3dzq28zgsgk9p7kb2ni9d14pcx5w9q6sji"; depends=[]; }; @@ -3525,18 +3650,20 @@ in with self; { ProbSamplingI = derive2 { name="ProbSamplingI"; version="0.1.0"; sha256="1s72jvzayrscn5k43gwip28lax4k24b6piy1wmwvkmpf2xx57wiv"; depends=[]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; ProbeDeveloper = derive2 { name="ProbeDeveloper"; version="1.0.0"; sha256="1d2zr8ikia3mspp2arpx7iwf4a4pq1ywl82pxbxrw6xpz313d5x9"; depends=[Biostrings TmCalculator]; }; + ProbitSpatial = derive2 { name="ProbitSpatial"; version="1.1"; sha256="1wa020hb02zjf4shzb345nyjkxm38wf67knvnl9iyh6n2sc34975"; depends=[Matrix numDeriv RANN Rcpp RcppEigen]; }; ProcData = derive2 { name="ProcData"; version="0.3.2"; sha256="1a0rbj57rbxf5axfyd1j9j1mh7ara3rlq31lysaprwaymig94mml"; depends=[keras Rcpp]; }; + ProcMod = derive2 { name="ProcMod"; version="1.0.8"; sha256="0rxh135gs9gq9sag1cmvywdgnax7n989gmffbxil71fy49kxpwdg"; depends=[foreach MASS Matrix permute Rdpack]; }; ProfessR = derive2 { name="ProfessR"; version="2.4-1"; sha256="1wsbx0dsygc1ipzhgs1pd0lhdb0qvp4ydqzwarn6zv27rzf4p3bd"; depends=[RPMG]; }; ProfileLikelihood = derive2 { name="ProfileLikelihood"; version="1.1"; sha256="16cdp1nimhg1sd2x0qbffm7clgk54p0838y688z8lnsrjaggmb0x"; depends=[MASS nlme]; }; ProfoundData = derive2 { name="ProfoundData"; version="0.2.1"; sha256="1zqg821pv3i5nf76s7yppnmy13y14pj0l7rjhk50wlxrxdb53ibz"; depends=[DBI RNetCDF RSQLite settings sqldf zoo]; }; - ProjectManagement = derive2 { name="ProjectManagement"; version="1.3.7"; sha256="1x83pzfhv137kqnxm2rxy19wh81q683nwv36iqaw3pq3zla6kc50"; depends=[GameTheory igraph kappalab lpSolveAPI plotly triangle]; }; - ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.10.1"; sha256="0m8s1addb7nq743mbr4mpfp3r3rnryaxba65dhyk0afmk2y828za"; depends=[]; }; + ProjectManagement = derive2 { name="ProjectManagement"; version="1.4.0"; sha256="1na2mydnkhwij8jc0c98241bsskwf5jdqjayw3rqrmnlsyppla9k"; depends=[GameTheory igraph kappalab lpSolveAPI plotly triangle]; }; + ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.10.2"; sha256="0r1af5h24nbgr39njchnqd54cw7cyzsw8k1qind8h5af491wmq0h"; depends=[digest tibble]; }; ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.1.6"; sha256="0b2bljw5gslkw6jkajnk3jsx1kgi7bk9vrnivgkaxq76qi8bgsr9"; depends=[deldir GeneralizedUmatrix geometry ggplot2 plotly Rcpp shiny shinyjs shinythemes vegan]; }; ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.1"; sha256="03ipsbs8pfwr8wsx7j2y9c67ic4qcady7xpa47l8dr14ff63cfk7"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.3-0"; sha256="1ywzi88igzaj2wnbrqa08cy7pw886z2m0x3j7rk45rin9mgpfdfd"; depends=[]; }; PropClust = derive2 { name="PropClust"; version="1.4-6"; sha256="1p15n98b6qprphgbhdqgnsxy9d9kik19h6j9f2dy6x1hkinrzsfa"; depends=[dynamicTreeCut fastcluster]; }; PropScrRand = derive2 { name="PropScrRand"; version="1.1"; sha256="0cj62dzg4zm8d1g8h7qmviiwm93cwplppbi0p674fmmf1wy84v9s"; depends=[]; }; - ProteinDescriptors = derive2 { name="ProteinDescriptors"; version="0.1.0"; sha256="1ydm8aym1wwxmfh4krh84nmj1wkgb574igg1sywl58l3qlnhya0l"; depends=[]; }; + PropensitySub = derive2 { name="PropensitySub"; version="0.2.0"; sha256="0cx8f3pcn37vrk1d3jbsnpkcdd1pf8xi4v7si4ii4rkxr2iszahd"; depends=[dplyr ggplot2 gridExtra gtable Matching nnet plyr pROC rlang scales survival survminer]; }; Przewodnik = derive2 { name="Przewodnik"; version="0.16.12"; sha256="1aq80aqflfm1ypqa51h10mc3g0qdr651j6g1b7008k7h0ryq42gv"; depends=[PBImisc PogromcyDanych]; }; Pstat = derive2 { name="Pstat"; version="1.2"; sha256="17bqkaf9590jhiaamaafmvkqmy2aqkcfqhk8m4w35g58j48yk4yx"; depends=[]; }; PsumtSim = derive2 { name="PsumtSim"; version="0.4"; sha256="0079kb1bgsxs4cwmn33rbbk2jgq39rdjfgz9k9hc64iyzz0i6na3"; depends=[boot EffectsRelBaseline]; }; @@ -3548,16 +3675,16 @@ in with self; { PublicationBias = derive2 { name="PublicationBias"; version="2.2.0"; sha256="1mdvzf2qiq4zvp4iinjnnj0rq3dqcz18r27nr62znh05jp6i96gx"; depends=[dplyr ggplot2 metafor MetaUtility Rdpack robumeta]; }; Publish = derive2 { name="Publish"; version="2020.12.23"; sha256="1qpv5hj9agmc4hrpskqk0lns8bh8w3j27d4ckh5y7gh1532qzad7"; depends=[data_table lava multcomp prodlim survival]; }; PupilPre = derive2 { name="PupilPre"; version="0.6.2"; sha256="123m1zqld0jl26vqz41iic7vxzyfs1aw8zi5ki2cy6wzw9ss87m6"; depends=[dplyr ggplot2 mgcv rlang robustbase shiny signal tidyr VWPre zoo]; }; - PupillometryR = derive2 { name="PupillometryR"; version="0.0.3"; sha256="19llm6p67z0z29zxmjfz9ad624428szdjdd1ssj7j3zjcyjvqihy"; depends=[data_table dplyr fda ggplot2 itsadug lazyeval mgcv rlang signal tidyr zoo]; }; + PupillometryR = derive2 { name="PupillometryR"; version="0.0.4"; sha256="0yk30sgl2qqa6pva649swq523vh446ifmydildycfvfmlm1h4qza"; depends=[data_table dplyr fda ggplot2 itsadug lazyeval mgcv rlang signal tidyr zoo]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; Pursuit = derive2 { name="Pursuit"; version="1.0.2"; sha256="1dd5idsqx08yyn92mwszad7rgl4hf2vr2a0m0cjqpa00cym43z7l"; depends=[MASS]; }; PwrGSD = derive2 { name="PwrGSD"; version="2.3.3"; sha256="18qb1an6i5p08dvimwc0n95b4m1myh3k64iinsx0121jzprzcxxp"; depends=[survival]; }; - PxWebApiData = derive2 { name="PxWebApiData"; version="0.5.0"; sha256="14g83ms4frgzspffc2vj8833ksnwb64r2qpnmy5f9jzzwp3gf61k"; depends=[httr jsonlite pxweb rjstat]; }; + PxWebApiData = derive2 { name="PxWebApiData"; version="0.6.0"; sha256="0afkpw42dy8ifd5pmrwvpqiscm7z5gx30izsilwfq65j206bjadg"; depends=[httr jsonlite pxweb rjstat]; }; Q2q = derive2 { name="Q2q"; version="0.1.0"; sha256="1n97axhcq64fg92cbndqw70c8awknjap91bh2h6i5cvd0c80pb85"; depends=[]; }; Q7 = derive2 { name="Q7"; version="0.1.0"; sha256="09jhqraajvlm7iiri4f7xlllkcx8q5h3sg472ishj47wg5qf2rym"; depends=[magrittr]; }; QAIG = derive2 { name="QAIG"; version="0.1.7"; sha256="04ygizvplvrzhf1p0vwj75x7k8sl0ym5zbrsvn63y983awih2p6i"; depends=[Formula stringr]; }; QBAsyDist = derive2 { name="QBAsyDist"; version="0.1.2"; sha256="1yql29npaq9yz02bv3hqf5m2mhscjms7qqf4vlaxm8s665rxcxad"; depends=[ald Deriv GoFKernel locpol nloptr quantreg scdensity zipfR]; }; - QCA = derive2 { name="QCA"; version="3.11"; sha256="0j6cj61y1kv5cn08zch0rrh2mlcnqzbc5q6n7cqx39w2zgs8v89q"; depends=[admisc shiny venn]; }; + QCA = derive2 { name="QCA"; version="3.13"; sha256="1v85bcir1jpkm61zpv9zyf79qv3nb4z0z5lh1r10b9idffddcjws"; depends=[admisc shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -3568,7 +3695,7 @@ in with self; { QDComparison = derive2 { name="QDComparison"; version="3.0"; sha256="0y4494r3ixkyh58xr9md7c6xgcj1hgbjzfybvqqdbawjxvy5p38i"; depends=[]; }; QDiabetes = derive2 { name="QDiabetes"; version="1.0-2"; sha256="0r1rbg3azh7y4f5r9w0zj6qa658f63gyq6b007q514iivkzxib1c"; depends=[]; }; QF = derive2 { name="QF"; version="0.0.4"; sha256="1f5506l3jjq657lfh3r1dn9cfxsdsbph11i1f6wnqpfdcjhk7dj1"; depends=[Rcpp RcppGSL]; }; - QFASA = derive2 { name="QFASA"; version="1.0.3"; sha256="1yw745wk9ijvqs3hv0gbm6bkzjrlj42ipwbzypj73s3f7ygl452f"; depends=[boot futile_logger gamlss gamlss_dist Rsolnp]; }; + QFASA = derive2 { name="QFASA"; version="1.1.1"; sha256="16y8clv9h5crr9x79y0zzc2qmazi1d6qdslk1ranp2llwa42d9sp"; depends=[boot bootstrap Compositional compositions dplyr futile_logger gamlss gamlss_dist MASS Rcpp RcppEigen Rsolnp TMB vegan]; }; QFRM = derive2 { name="QFRM"; version="1.0.1"; sha256="1k79sq9il4326q7ivwdwlzw7drjv4pwqra3fr8kyyqcpmxh9296h"; depends=[]; }; QGameTheory = derive2 { name="QGameTheory"; version="0.1.2"; sha256="0h3qkb0zg6km3s89bjnv9503hgcng4wfywfy1x5dsbj5azs9hs5w"; depends=[dplyr R_utils RColorBrewer]; }; QGglmm = derive2 { name="QGglmm"; version="0.7.4"; sha256="0ghvicz4ia1180byj28lmg49889hqhb94g1jrkhm6hnzgqbjnfmd"; depends=[cubature]; }; @@ -3585,17 +3712,18 @@ in with self; { QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.3.1"; sha256="01lxa52fm6pzicjg252fxqy9hcj0rf511nzc3fcq25cfi9cly0v1"; depends=[data_table doParallel foreach glmnet MASS openxlsx qtl Rcpp stringr]; }; QTL_gCIMapping_GUI = derive2 { name="QTL.gCIMapping.GUI"; version="2.1.1"; sha256="0a155vl869i3li2i67b89p056x50ycqp9yk0ll5g3fp3xcdl80zs"; depends=[data_table doParallel foreach glmnet MASS openxlsx qtl QTL_gCIMapping Rcpp shiny stringr]; }; + QTLEMM = derive2 { name="QTLEMM"; version="1.0.0"; sha256="1k7vx1x0ysm0kndic5f6vd7m6hf8gp4wb1ramv371dahdw7y8md8"; depends=[mvtnorm]; }; QTLRel = derive2 { name="QTLRel"; version="1.6"; sha256="1198qrrl7samm4jzliy5i8wfvladz6wpm48l1g2x6ackm1asiw75"; depends=[gdata lattice]; }; QTOCen = derive2 { name="QTOCen"; version="0.1.1"; sha256="0wlbxk1rd56k02jf3pfzbx6xx5mmf6sb7gvds0067cvb7m42ghcr"; depends=[MatrixModels quantreg Rdpack rgenoud survival]; }; QUALYPSO = derive2 { name="QUALYPSO"; version="1.2"; sha256="0hp99hhlv7rijn34ncshpvbnmhbx3f5km7bzr0z7yr7l3j1vx3sc"; depends=[doParallel expm foreach MASS Rfast]; }; QZ = derive2 { name="QZ"; version="0.2-1"; sha256="1xivasa5dppm9z02ki6ciqxj0ybxch41w1xszl9zqrf755b6f6xw"; depends=[Matrix]; }; - Qapprox = derive2 { name="Qapprox"; version="0.1.0"; sha256="0mcrpmbpmj2hzv15a5rfc4l1vl3iccbsiw3a04zb4ql5mwr9ksyr"; depends=[]; }; - Qtools = derive2 { name="Qtools"; version="1.5.4"; sha256="0fqxh62r2zhvnjqld5rjn8yv6cb86brjbf08alq0pr6rc0is6sza"; depends=[boot glmx gtools MASS Matrix np numDeriv quantreg Rcpp RcppArmadillo]; }; + Qapprox = derive2 { name="Qapprox"; version="0.2.0"; sha256="0mv3xfy847lqh95mpccjiw5jjbml7dwrna7i16532sdqcxaq4m02"; depends=[]; }; + Qtools = derive2 { name="Qtools"; version="1.5.5"; sha256="0kmd5cd299gjw5qbk8yhlzxcwa3ykrr36zcpk773mykyz57q46hb"; depends=[boot glmx gtools MASS Matrix np numDeriv quantreg Rcpp RcppArmadillo]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; QuClu = derive2 { name="QuClu"; version="0.1.0"; sha256="0a2malh9vz5jcjgdx4d98k0c61vz3ip8ynqh5i85x8hzcby11qgj"; depends=[]; }; - QuadRoot = derive2 { name="QuadRoot"; version="0.1.0"; sha256="1zb2vhxnx93aan2a4jgny9qn1cgjj2a4zjz3h4whqvam5mdlh890"; depends=[]; }; + QuadRoot = derive2 { name="QuadRoot"; version="0.2.0"; sha256="0p6d8s3qrynaky3xv7srh7qrpm6b0xrlq70m8gqsfddlgrvxl668"; depends=[]; }; QualInt = derive2 { name="QualInt"; version="1.0.0"; sha256="1ms96m3nz54848gm9kdcydnk5kn2i8p1rgl2dwn7cqcqblfvsr4j"; depends=[ggplot2 survival]; }; - Quandl = derive2 { name="Quandl"; version="2.10.0"; sha256="0kw3hh19q32vc1rr3y65ry3kyxc9dwyb94xpfv9srkpzg48damhr"; depends=[httr jsonlite xts zoo]; }; + Quandl = derive2 { name="Quandl"; version="2.11.0"; sha256="1bsba6blbcq0my8wm0qcy0qabbgx344gjljnjwaqfrqkjcphf5xs"; depends=[httr jsonlite xts zoo]; }; QuantNorm = derive2 { name="QuantNorm"; version="1.0.5"; sha256="1hds9ybwsgnmcpa22vlmgdq02ilhn0c6a7z1qjiq4i5iqjd4gwf6"; depends=[]; }; QuantPsyc = derive2 { name="QuantPsyc"; version="1.5"; sha256="1i9bh88r8zxndzjqsj14qw64gnvm5a9kvhjhzk3qsrvl3qzjgh93"; depends=[boot MASS]; }; QuantTools = derive2 { name="QuantTools"; version="0.5.7.1"; sha256="1nkf7ihzfwgz7svh1jybgcvqwbim2dqzi00l4m9pma463va4q19d"; depends=[data_table fasttime R6 Rcpp RCurl readxl]; }; @@ -3614,39 +3742,41 @@ in with self; { R_methodsS3 = derive2 { name="R.methodsS3"; version="1.8.1"; sha256="16v1br7lf7vxv40z65giv9jnqkpnyqagcmgqa0s1jy7spj0zp64a"; depends=[]; }; R_oo = derive2 { name="R.oo"; version="1.24.0"; sha256="1divisff26fmiqg6vmabnwlrx079c066r8qvkakfp336vnwdm89p"; depends=[R_methodsS3]; }; R_rsp = derive2 { name="R.rsp"; version="0.44.0"; sha256="0n9sxrffahgxcc8h9vgxg5i446g14cibixpf82nkpm5bvidhfsc9"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; - R_temis = derive2 { name="R.temis"; version="0.1.2"; sha256="1bar4vyjnc9plwqm66vbgf6rakgj095zb7wsypmf3j3az694y62q"; depends=[crayon explor FactoMineR igraph NLP slam SnowballC stringi testthat tm tm_plugin_alceste tm_plugin_europresse tm_plugin_factiva tm_plugin_lexisnexis wordcloud]; }; + R_temis = derive2 { name="R.temis"; version="0.1.3"; sha256="1qa381fv1hxd1fv9d22772aibiia6m2ycm69znjy3ah2w986hjfh"; depends=[crayon explor FactoMineR igraph NLP slam SnowballC stringi testthat tm tm_plugin_alceste tm_plugin_europresse tm_plugin_factiva tm_plugin_lexisnexis wordcloud]; }; R_utils = derive2 { name="R.utils"; version="2.10.1"; sha256="1gssnk73nhisc20by9kvfl4byfsmwrk6597na0x40ycck58lyylm"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; R2019nCoV = derive2 { name="R2019nCoV"; version="0.1.0"; sha256="1959mwacn0zzq0g5ili2v6aqs51rb6qvlsv16xx7qwml8xahf215"; depends=[dplyr ggplot2 jsonlite maps pinyin]; }; R2Addhaz = derive2 { name="R2Addhaz"; version="0.1.0"; sha256="1xaqbzq2chsgkg1gc163fq8qcgzq9wwn2bm4mwvc31ay0gg4f3xi"; depends=[ahaz caTools pracma Rdpack survival zoo]; }; - R2BEAT = derive2 { name="R2BEAT"; version="1.0.2-1"; sha256="168q8xbl4kxr5mxfg8f02wg7w0kwp6sc70pwycqaz88zgi0pxwxq"; depends=[devtools plyr sampling]; }; - R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; }; + R2BEAT = derive2 { name="R2BEAT"; version="1.0.3"; sha256="1nl9yy62n1mgf9y0n0d7xj52w2n5m5hph0pmj2s666jkrgqvl4fr"; depends=[devtools plyr sampling SamplingStrata]; }; R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; }; R2DT = derive2 { name="R2DT"; version="0.2"; sha256="0hyisq6mij80v14sjspn9idd1h38sd1knbpd0dn2wy9k2w1fl0pk"; depends=[data_table devFunc plyr]; }; R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-7"; sha256="1r12b0gy5747acn0jyf3n2f210a51pgl6vkk1rd4fbbj0dk5bwmf"; depends=[broom coda digest doParallel foreach foreign lattice Matrix memisc R2WinBUGS texreg tibble]; }; R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2.1"; sha256="0689aqa034xkbyy46m3sjanjkxrii4ma1crm5qw5kaqbx7dg153c"; depends=[boot coda]; }; - R2SWF = derive2 { name="R2SWF"; version="0.9-5"; sha256="1xahkqp93b94zwg0d6r659kafa9dz5ksms8ycka1dnmihzzr50z4"; depends=[sysfonts]; }; + R2SWF = derive2 { name="R2SWF"; version="0.9-6"; sha256="0ag4w9cgxwfxfpywq3nv04n2mlwj07r04pg48pmlvkw0h7fjlfjl"; depends=[sysfonts]; }; R2WinBUGS = derive2 { name="R2WinBUGS"; version="2.1-21"; sha256="0k8k214x712vjj2k1am4zzf6scccs3b98ysiz4lwxpzm818wp1ps"; depends=[boot coda]; }; R2admb = derive2 { name="R2admb"; version="0.7.16.2"; sha256="1gwp850ff76lqqn6amj75rjqb1szk6x2vlhqgwng4z45i56bmdf7"; depends=[coda lattice]; }; - R2jags = derive2 { name="R2jags"; version="0.6-1"; sha256="0h5si5d8yn6zxbfmv38kmyqhpwm1valnnn3sb445465m8rafl5y6"; depends=[abind coda R2WinBUGS rjags]; }; + R2jags = derive2 { name="R2jags"; version="0.7-1"; sha256="0si2f0lmnpjcsmy54k51kwj1fkx24dshiidv46h8j2xjq1hp429v"; depends=[abind coda R2WinBUGS rjags]; }; R2ucare = derive2 { name="R2ucare"; version="1.0.0"; sha256="1nh2wf3syxjz9flxhf8x9fd2c2ndn4dha4k34lz1nq5j4qz7wfp1"; depends=[RMark stringr]; }; R330 = derive2 { name="R330"; version="1.0"; sha256="01sprsg7kph62abhymm8zfqr9bd6dhihrfxzgr4pzi5wj3h80bjm"; depends=[lattice leaps rgl s20x]; }; R3port = derive2 { name="R3port"; version="0.2.4"; sha256="0h1n5v1hkdqbars8xsid208wkr8jw9gwx5j2gprfl58fh0d2rc94"; depends=[plyr reshape2 tinytex whisker]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; - R6 = derive2 { name="R6"; version="2.5.0"; sha256="00ifi2kwa7kn67xf0z1w6jfdicjczygbyi5mhfw2qlzc4sbazhdf"; depends=[]; }; + R6 = derive2 { name="R6"; version="2.5.1"; sha256="0j5z0b0myzjyyykk310xsa9n2mcm9bz8yqbq4xgz2yzdq8lvv4ld"; depends=[]; }; R62S3 = derive2 { name="R62S3"; version="1.4.1"; sha256="0g01izg77spn79xqwva2gzrvk66i20xlb789wl5rgcz7pz7gpjd2"; depends=[data_table]; }; R6DS = derive2 { name="R6DS"; version="1.2.0"; sha256="0ai1yqfhn634vm88waxdb6j24vwcna29gdqzdrwm0nxwf7l6g0m3"; depends=[R6]; }; - R6P = derive2 { name="R6P"; version="0.2.0"; sha256="1q7qx79z5g1dhyb1dawmzps9w19mn6nlr9fmf7z83kqy9mdnhkrn"; depends=[purrr R6 stringr]; }; + R6P = derive2 { name="R6P"; version="0.2.2"; sha256="05gilw9s9fawjdflpbq3v1q6xx0jv45zvr7hxq0mf5n2xn2923ck"; depends=[collections dplyr purrr R6 stringr tibble tidyr]; }; + R6causal = derive2 { name="R6causal"; version="0.6.0"; sha256="07af19pfblp07102b9q4kvw4q1byd79m06pbj17jszl27ski4hqb"; depends=[causaleffect data_table dosearch igraph R6]; }; + RABR = derive2 { name="RABR"; version="0.1.0"; sha256="0kaprgc4nj5gizjdjjf9iiqyyp92qc18083ascs0swv1xzfp6vs0"; depends=[asd cubature data_table doParallel foreach ggplot2 multcomp multxpert survival]; }; RAC = derive2 { name="RAC"; version="1.5"; sha256="0q0kk9j3blrnhv0rfmryc35lli5j4kds2vmjdpg77znagb45609k"; depends=[maps maptools matrixStats ncdf4 plotrix raster rgdal rgeos rstudioapi sp]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; RADanalysis = derive2 { name="RADanalysis"; version="0.5.5"; sha256="1py07p24i1pky8wwyy8ajmkg6h2n7nbpxp1w6lrkiyl0p2kgjm20"; depends=[scales sfsmisc]; }; + RADstackshelpR = derive2 { name="RADstackshelpR"; version="0.1.0"; sha256="0j2vazbji8xqb8xkd9jrpi10iqj30rvkdjfs4snavl9nsbra99yf"; depends=[ggplot2 ggridges gridExtra vcfR]; }; RAEN = derive2 { name="RAEN"; version="0.2"; sha256="098d990qa987hx2llqwdw2bmi5nmrlda23j1rgmw5nirllk28d30"; depends=[boot doParallel fastcmprsk foreach glmnet lars]; }; RAINBOWR = derive2 { name="RAINBOWR"; version="0.1.26"; sha256="1x2gdx9fk28r7q6i5b8x0kald2qfiljqm62fpwhg57vz0q53pl51"; depends=[ape cluster expm ggplot2 ggtree haplotypes here htmlwidgets MASS Matrix optimx pbmcapply pegas phylobase Rcpp RcppEigen Rfast rrBLUP scatterpie stringr]; }; - RALSA = derive2 { name="RALSA"; version="1.0.0"; sha256="0dal95kzi91f78j196w09d22c198cginihhbmpxbzqqws9sdv6c4"; depends=[data_table DT foreign gdata Hmisc openxlsx readr shiny shinydashboard shinyFiles shinyjs stringi stringr]; }; + RALSA = derive2 { name="RALSA"; version="1.0.1"; sha256="0gvckia9xl6yr4w5mdmz500xcbghjak3krf6as2mmr814ibmw3k0"; depends=[data_table DT foreign gdata Hmisc openxlsx readr shiny shinydashboard shinyFiles shinyjs stringi stringr]; }; RAM = derive2 { name="RAM"; version="1.2.1.7"; sha256="0aalswivpjs1glwf4yh3b79lch3n32fyj5xda55h3v7gzs7p0d7f"; depends=[ade4 ape data_table FD ggmap ggplot2 gplots gridExtra labdsv lattice MASS permute phangorn phytools plyr RColorBrewer reshape reshape2 RgoogleMaps scales vegan VennDiagram]; }; - RAMClustR = derive2 { name="RAMClustR"; version="1.2.0"; sha256="1cvwl8jhwqkd1mcs0dvznrycs39pwpapsf733slch8sgm2kbg231"; depends=[BiocManager dynamicTreeCut e1071 fastcluster ff ggplot2 gplots httr InterpretMSSpectrum jsonlite MSnbase pcaMethods preprocessCore RCurl stringi stringr webchem xml2]; }; + RAMClustR = derive2 { name="RAMClustR"; version="1.2.2"; sha256="0v75dxwn1bybjw3zybvz60j01nffl0nzybw5k0a7kqhbcb7cdpqw"; depends=[BiocManager dynamicTreeCut e1071 fastcluster ff ggplot2 gplots httr InterpretMSSpectrum jsonlite MSnbase pcaMethods preprocessCore RCurl stringi stringr webchem xml2]; }; RAMP = derive2 { name="RAMP"; version="2.0.2"; sha256="0836fiycrsxiwdw7srz1rvsf639iqh2rk89gavx4kvn0i0sc8d2x"; depends=[]; }; RAMpath = derive2 { name="RAMpath"; version="0.4"; sha256="0blixfmgiq22hd356hrp4vbhfkkgh0a58143nhirjx3sav9pxc1v"; depends=[ellipse lavaan MASS]; }; RANKS = derive2 { name="RANKS"; version="1.0"; sha256="1lvaya9jlqrr9klqznw4fz5h5x0sw191ci74hpymb4gzhhxcbp27"; depends=[graph limma NetPreProc PerfMeas RBGL]; }; @@ -3655,19 +3785,19 @@ in with self; { RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.1"; sha256="1bj3xsl83mb8zwap8icywrfdld382fram79b0n14jbk1l87rj9r4"; depends=[mgcv]; }; RAQSAPI = derive2 { name="RAQSAPI"; version="2.0.1"; sha256="0dz81fkxjk85n9c9kabibyr0c7bg6widamnnvld135q3w1nridfc"; depends=[dplyr glue gtools httr jsonlite lifecycle lubridate magrittr purrr rlang stringr tibble]; }; - RATest = derive2 { name="RATest"; version="0.1.8"; sha256="13z2dlyq3cxgqphzjfx4wabbkk4kf33ybmnhcs6f034kya2z7yj3"; depends=[ggplot2 gridExtra quantreg]; }; + RATest = derive2 { name="RATest"; version="0.1.9"; sha256="02673wbss90c192rxbzxfsbnirl63k7d8fq989chmjc5z2xjzajj"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.18"; sha256="1c3m2j2cf1s51p783rdng5ns913bv7rbjc1vpmrmsxg2kf5f6qyq"; depends=[RCurl rjson]; }; RAhrefs = derive2 { name="RAhrefs"; version="0.1.4"; sha256="0yd7jbv2x711dnhbvwjjg7qhg8h8bh5564amsv9bkqw661i042m3"; depends=[assertthat httr jsonlite testthat]; }; - RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.4"; sha256="0z08xwdn3vzwmprx5yh2xip5bqk13zrd47lwnsa2yin2phz6yry1"; depends=[]; }; + RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.6"; sha256="15j6vb6rm4ykwjachqyyfvjshiilyjqnpj8x6qc93savk04rf279"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="3.2.2"; sha256="0l0f4k666nh00db94sjxz60anr4l9vm0259pcc2a4whk2pmjcq5n"; depends=[unix]; }; - RAthena = derive2 { name="RAthena"; version="2.0.1"; sha256="1gcziyih4a72r6dnjapj6kpb0d111bqwx32f92l85pm8z931mppg"; depends=[data_table DBI reticulate uuid]; }; + RAthena = derive2 { name="RAthena"; version="2.2.0"; sha256="068gljn17wwwzkd52yjg4kszg10innk401lm1sg6r4x3l6yppnn7"; depends=[data_table DBI reticulate uuid]; }; RBF = derive2 { name="RBF"; version="2.1.0"; sha256="0062ckvrjfkkl5lfrshrr2cynrxsrp4zpdpl8nij06hm00i3gfs5"; depends=[]; }; - RBMRB = derive2 { name="RBMRB"; version="2.1.4"; sha256="1n5kskcsw0ks3f97mnlbkgvwdnxv3s6xy02b8cj5wq3hdpf66h94"; depends=[data_table ggplot2 httr plotly rjson]; }; + RBMRB = derive2 { name="RBMRB"; version="2.1.7"; sha256="09x7zaigflc0d3pbdrvfv1kdklrlzgd4v2ma3dcr96l36n1iqqns"; depends=[data_table ggplot2 httr plotly rjson]; }; RBNZ = derive2 { name="RBNZ"; version="1.1.0"; sha256="11fdnc2pmw5nq3lswid078l307ln6853a3b9d383msvrkz6yms26"; depends=[httr lubridate readxl rvest xml2]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; RBaseX = derive2 { name="RBaseX"; version="0.3.0"; sha256="15hn04ijvqbza8brca7g06yi621hyf3gjgkfvf1wp4jgzysgd8ww"; depends=[data_table dplyr magrittr openssl R6 RCurl stringr tibble]; }; - RBesT = derive2 { name="RBesT"; version="1.6-1"; sha256="11xzjw71mnn4s7z0r58vfb19ls08jflj6917iichfz7k5sxnh9qm"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; + RBesT = derive2 { name="RBesT"; version="1.6-2"; sha256="1iyw87hp37l67zi4bv9npyp431358d3j5m6j4gxyz1j3k9l9g4x9"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; RBitmoji = derive2 { name="RBitmoji"; version="0.0.2"; sha256="1v9qj3vmqsvnccsy735nbflmd81183h2flm0f1ckd4kl08r2fr3f"; depends=[getPass httr jsonlite png RCurl]; }; RBtest = derive2 { name="RBtest"; version="1.1"; sha256="09da721zfj6cw4i9gifn5f0sv3nj0qfjb96c5w9g9gzx55ihssnk"; depends=[mice nnet psych]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; @@ -3681,7 +3811,7 @@ in with self; { RCRnorm = derive2 { name="RCRnorm"; version="0.0.2"; sha256="1mz1jb7mc9c47hbk9flnddny4zir6r2k5qis30iynwqny521l6ln"; depends=[truncnorm]; }; RCSF = derive2 { name="RCSF"; version="1.0.2"; sha256="1hjl7qsdgcddn3nh2likndhfhnw9gj3453xqq96gddgb1y0m3bh1"; depends=[Rcpp]; }; RCSL = derive2 { name="RCSL"; version="0.99.95"; sha256="1ngzbhrc74ljhidsf7a17k4hyx0igv2srgbf822gm2wawzsmp0y2"; depends=[ggplot2 igraph mclust NbClust pracma RcppAnnoy Rtsne SingleCellExperiment umap]; }; - RCT = derive2 { name="RCT"; version="1.1"; sha256="0nbjw6iyhxdszpb0i4zg6mk1z3a0lsij2300gygyqj0q4x6fmsl0"; depends=[broom dplyr forcats ggplot2 glue lfe magrittr MASS pracma purrr rlang stringr tidyr tidyselect]; }; + RCT = derive2 { name="RCT"; version="1.1.1"; sha256="01ir440zgxjvzwn5vazxib0w14nqy7lk7glwvba39xqghb3xw85z"; depends=[broom dplyr forcats ggplot2 glue lfe magrittr MASS pracma purrr rlang stringr tidyr tidyselect]; }; RCarb = derive2 { name="RCarb"; version="0.1.4"; sha256="0mlas45ypwdkk6gr35fhsrjgn8am06ikh123drmky1yj1kkg6p76"; depends=[interp matrixStats]; }; RCassandra = derive2 { name="RCassandra"; version="0.1-3"; sha256="0xa241s81cyw6lfjb522f2mlyrd0gav9yz3z5jab9hpdpgg9ri38"; depends=[]; }; RChest = derive2 { name="RChest"; version="1.0.3"; sha256="112y6g1lyk3wky825g77sy49wgqs8vqdi90lrp0qza6cqjg381mq"; depends=[Rdpack reticulate]; }; @@ -3689,28 +3819,31 @@ in with self; { RCircos = derive2 { name="RCircos"; version="1.2.1"; sha256="1zdq3ga2pd0p2gzlm0vr8w3a4rq4hgka3r56kkcym0za0nmqk51v"; depends=[]; }; RClickhouse = derive2 { name="RClickhouse"; version="0.5.2"; sha256="1ii4d1nh15km1savahpwgvdn3lb2y7sa44izqydckw1xawwgf7xr"; depends=[bit64 DBI dbplyr dplyr Rcpp]; }; RClimacell = derive2 { name="RClimacell"; version="0.1.4"; sha256="03w2psiix74d2cbaz06bk77pclc6lfjhfdi057rdmw4nv3xv1fqi"; depends=[assertthat dplyr httr lubridate magrittr rlang stringr tibble tidyr tidyselect]; }; - RClone = derive2 { name="RClone"; version="1.0.2"; sha256="1kv02acj0mk5102wvmdnxnkb7qig3jb9amcs4k2r26fpa4hyfa7f"; depends=[]; }; + RClone = derive2 { name="RClone"; version="1.0.3"; sha256="1zcb7s88qkpcbkhvawggsckzs5d9s9l9kr2c2njrr86ymq7lgwdj"; depends=[]; }; RColetum = derive2 { name="RColetum"; version="0.2.1"; sha256="1hgk9p234m3w49sw2j2rg8c14z3gz1mabvb69b1bxrg7f1mz9slg"; depends=[dplyr httr jsonlite]; }; RColorBrewer = derive2 { name="RColorBrewer"; version="1.1-2"; sha256="1pfcl8z1pnsssfaaz9dvdckyfnnc6rcq56dhislbf571hhg7isgk"; depends=[]; }; RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; - RCurl = derive2 { name="RCurl"; version="1.98-1.3"; sha256="0m975zzl76xcj3xz181w9fvh4sr4hwm9dcgg13b3cqfm5g8mx6jw"; depends=[bitops]; }; - RCytoGPS = derive2 { name="RCytoGPS"; version="1.1.1"; sha256="01pgg4i3qw75h9i49agv0xv23b5dn6ngcc4ma22dldydiiwhrhh5"; depends=[rjson]; }; - RCzechia = derive2 { name="RCzechia"; version="1.7.0"; sha256="068kjzcvbpda589lzgx8rws6gzahgpzlaisj32qprxbnv9ikc4xm"; depends=[curl httr jsonlite magrittr sf]; }; + RCurl = derive2 { name="RCurl"; version="1.98-1.5"; sha256="13b9vlvknxlcmqgaaxb33srvyshsh59zmdsz4pfgz24i0fd7q63k"; depends=[bitops]; }; + RCytoGPS = derive2 { name="RCytoGPS"; version="1.2.1"; sha256="1ppxyrm9h09kk6lnr6yg3n3xl08l9zp4rqliz92k5h42hmgj6f02"; depends=[rjson]; }; + RCzechia = derive2 { name="RCzechia"; version="1.8.3"; sha256="025fv6dh1q6g13wmi2q7czgm30d6j9v56ihp8cvag6yqxq60l08x"; depends=[curl httr jsonlite magrittr sf]; }; RDFTensor = derive2 { name="RDFTensor"; version="1.3"; sha256="1kfhhn0lb1r61bkgxn7rv1smgk8b7vxbc8y97hdmg5argiywc65i"; depends=[doParallel foreach Matrix pracma]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="1.0"; sha256="13ly1p42njbcygwvkyii8sjqbsywjy5w5g1kd7m8kswi5dsk3qqv"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; + RDP = derive2 { name="RDP"; version="0.1.8"; sha256="189ijagl1vlpq97rwkhyq9nr08sjf1n36ql2wnf9cqbf35gyvxap"; depends=[Rcpp]; }; RDS = derive2 { name="RDS"; version="0.9-3"; sha256="0kcq5ym6l80shzxf9zv2rwb84r0q9qr2cwimcg76r97sfx7c2kp2"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales statnet_common]; }; RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; }; RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; }; RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; }; RDieHarder = derive2 { name="RDieHarder"; version="0.2.1"; sha256="1lz5qb51r321wxarnzaf37zxg19fcq8blw2qw3kspgbkvx283l0w"; depends=[]; }; + RDnp = derive2 { name="RDnp"; version="1.3"; sha256="1a10afwn41c0sd35i2hywg79gyf55nd212rfq5pv5inqdrr7kxym"; depends=[cellWise MASS]; }; RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; + REAT = derive2 { name="REAT"; version="3.0.3"; sha256="1bnmk74xdxckni6alp5kslsb3w7jlnfwc27mi5y3lry7zrvxi6lk"; depends=[]; }; REBayes = derive2 { name="REBayes"; version="2.2"; sha256="1jh5vw9pbcf5gpmx3b5b36fh8rz5y8npx53aai0kxh49kjf8d63c"; depends=[Matrix reliaR]; }; RECA = derive2 { name="RECA"; version="1.7"; sha256="1xikj20flqajpkw4wyynmqd1pafbylzwfrmc8bz9pqgggjjhrqql"; depends=[]; }; REDCapExporter = derive2 { name="REDCapExporter"; version="0.2.2"; sha256="0w7c1y58vnkbd11ndkcn5s5c54pmvyqhflwgg2q6dc3n671yp9wx"; depends=[curl data_table keyring lubridate]; }; - REDCapR = derive2 { name="REDCapR"; version="0.11.0"; sha256="0frhmnm25w9b84qk7vvvr8wkv1w3dmm0vqxav2cs7jimq38zwcvz"; depends=[checkmate dplyr httr magrittr readr rlang tibble tidyr]; }; + REDCapR = derive2 { name="REDCapR"; version="1.0.0"; sha256="1x1nrwrlv2xh0p13asj1hxm8jpc623mjf2m3lybj6466jm2qh33m"; depends=[checkmate dplyr httr magrittr readr rlang tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.4"; sha256="11m9k6xli3gqw2f9vwa9abpwsnxawi675zmi916yq2shws49m8xn"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; REPLesentR = derive2 { name="REPLesentR"; version="0.4.1"; sha256="0rwd7hxk12f4f1kpj6sl424yhbxi3h9dz6km5awijazmgv95carz"; depends=[dat knitr modules]; }; @@ -3724,16 +3857,16 @@ in with self; { REdaS = derive2 { name="REdaS"; version="0.9.3"; sha256="09mmcvzgsxvrcq7sq3pw81pxgb1493p8lx8p5hhz8i42vshza6pn"; depends=[]; }; REddyProc = derive2 { name="REddyProc"; version="1.2.2"; sha256="0b1vyv92wxbvdh1jaqmfb4qb1clpbh50j8h55nq777zc1l9ml4a7"; depends=[dplyr magrittr mlegp purrr Rcpp rlang solartime tibble]; }; REddyProcNCDF = derive2 { name="REddyProcNCDF"; version="1.1.4"; sha256="099f4mzqj7pjlrs8rdjg44mjm0058x3pj2imrfvk892hmlk4r53p"; depends=[REddyProc]; }; - REndo = derive2 { name="REndo"; version="2.4.2"; sha256="1c6wa4by8ns2msjn4718bnjch37ii5ij36my6yfl4ylylm0l2n77"; depends=[AER corpcor data_table Formula lme4 lmtest Matrix mvtnorm optimx Rcpp RcppEigen]; }; - RFCCA = derive2 { name="RFCCA"; version="1.0.4"; sha256="1a38q90pra9p2l1i0jhd981jnv8lanzwkkfhav0370ddri50r505"; depends=[CCA PMA]; }; + REndo = derive2 { name="REndo"; version="2.4.3"; sha256="1h7ycxwklb9dbb8q0g9cagjl93jhbjc86l25s1imdp1rqfsv8i6c"; depends=[AER corpcor data_table Formula lme4 lmtest Matrix mvtnorm optimx Rcpp RcppEigen]; }; + RFCCA = derive2 { name="RFCCA"; version="1.0.6"; sha256="1sh5dabcdjjb3a7h35q080abrw3cpav9jd6l28kn2xdr1f2qssnc"; depends=[CCA PMA]; }; RFGLS = derive2 { name="RFGLS"; version="1.1"; sha256="13ggxj74h5b2hfhjyc50ndxznkvlg18j80m78hkzwh25d3948fsk"; depends=[bdsmatrix Matrix]; }; RFLPtools = derive2 { name="RFLPtools"; version="1.9"; sha256="0vcxlvfhm6sksjs7zx45jss31310fvglzaj948j49xhf08rik0iz"; depends=[RColorBrewer]; }; RFOC = derive2 { name="RFOC"; version="3.4-6"; sha256="0cs5wmpvrlag9aisbfiwkvwcb3skv5z4sawl30krmsq49mzj7yhd"; depends=[GEOmap MASS RPMG RSEIS splancs]; }; - RFinanceYJ = derive2 { name="RFinanceYJ"; version="0.3.1"; sha256="0qhmzsch7c2p0zckjkspsajzh8m10cf75ixjlgd0nj8rm41fngm3"; depends=[XML xts]; }; + RFclust = derive2 { name="RFclust"; version="0.1.1"; sha256="0030d6831lvlhy7k9q5pin1jarzz4z242wncfsa520md1kvqs77d"; depends=[ConsensusClusterPlus iCluster randomForest]; }; RFishBC = derive2 { name="RFishBC"; version="0.2.3"; sha256="1xhjsinb6dfr1zzzyvawc6bb10dnr3nbx86mi6lrzav42sbq31ni"; depends=[cli clisymbols crayon readbitmap rlang settings stringr tidyr withr]; }; RFmerge = derive2 { name="RFmerge"; version="0.1-10"; sha256="1gcdd0a0czimzmzq2izskdaj26cc7qchrwlhssvnh5k59yx54r4l"; depends=[pbapply randomForest raster sf sp zoo]; }; - RForcecom = derive2 { name="RForcecom"; version="1.1"; sha256="1ch1pwpnqagzb9n4qbgr804bmnz819kp36r5a4zhijmq8xpv3qr2"; depends=[httr plyr RCurl XML]; }; RFormatter = derive2 { name="RFormatter"; version="0.1.1"; sha256="0jmzdc2cl4vvffsyfwp493fiygh9xinhv970qxp1667rw8wlap8l"; depends=[formatR]; }; + RFpredInterval = derive2 { name="RFpredInterval"; version="1.0.4"; sha256="0p1plszxqy6xxngrgzr6m0724rjz3caynipdb2r5sd9d2yc7cs3z"; depends=[data_table data_tree DiagrammeR hdrcde ranger]; }; RFreak = derive2 { name="RFreak"; version="0.3-0"; sha256="1dmllxb6yjkfkn34f07j2g7w5m63b5d10lh9xsmxyfk23b8l3x0x"; depends=[rJava]; }; RGA = derive2 { name="RGA"; version="0.4.2"; sha256="0pjizgvrh0gbjlyxlb3v93nhigg8rpq3mziv1qlp6r0s5y7cmpi9"; depends=[httr jsonlite lubridate plyr]; }; RGBM = derive2 { name="RGBM"; version="1.0-8"; sha256="0xd64g07y808nzs4zvbx6bxdpbj2ndqg6yzc3p0l43pxm4hyxva0"; depends=[doParallel foreach plyr]; }; @@ -3741,7 +3874,7 @@ in with self; { RGCxGC = derive2 { name="RGCxGC"; version="1.1-2"; sha256="03ihqra8q50a98adgxrx8l7js963f41kg2fy3lxzh9zma4gzj62q"; depends=[colorRamps mixOmics ptw Rdpack RNetCDF]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2.8"; sha256="1y70fs8d7vldwijgzny3awcvx97sghclyrb40dzvffli2q15ym9f"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; - RGF = derive2 { name="RGF"; version="1.0.7"; sha256="0610r0nyhdiqywqyi4f18vk3lg9hjgxgfa9vpph6v4w3px9v6jba"; depends=[Matrix R6 reticulate]; }; + RGF = derive2 { name="RGF"; version="1.0.8"; sha256="0nd38cn3248kgzknr0ba3wg5y1g15vh74y9y94i2bqr1vchf6xsm"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGISTools = derive2 { name="RGISTools"; version="1.0.2"; sha256="0pildj5pmc34f58bv39gxl3p2g0cr32przdhjnss37kcdlcv5zlb"; depends=[curl fields httr mapview raster Rdpack rjson rvest sf sp stars tmap urltools XML xml2]; }; RGeckoboard = derive2 { name="RGeckoboard"; version="0.1-5"; sha256="0h7x3kdmlba9siwcnf313ajmz2jsmyhl7pndzs7qaqina3hkl46r"; depends=[httr jsonlite]; }; @@ -3757,15 +3890,18 @@ in with self; { RH2 = derive2 { name="RH2"; version="0.2.4"; sha256="14590l3a2znd56nrq1zfbfv7fgii4672qy1xfwiynrh3mjad217k"; depends=[chron rJava RJDBC]; }; RHMS = derive2 { name="RHMS"; version="1.6"; sha256="067vxx0s338ziyyshq386br7b8ksycqinn16qnvb53ldshyw0dcm"; depends=[GGally ggplot2 Hmisc network pso]; }; RHPCBenchmark = derive2 { name="RHPCBenchmark"; version="0.1.0"; sha256="1f94d8z15ybqgc2pccsi1m6563xf26ygri6f4pwxkqjmxkxnk34y"; depends=[cluster Matrix mvtnorm]; }; + RHRT = derive2 { name="RHRT"; version="1.0.1"; sha256="0km93m1bgh64r174bm5pj2hhsa39kghjrzjlmpdrxr9wa1z8wdni"; depends=[]; }; RHRV = derive2 { name="RHRV"; version="4.2.6"; sha256="1rdfq1xnimli709waypwhw1v277hxhmiy7ziizgqi4522nip4h49"; depends=[lomb nonlinearTseries waveslim]; }; RHSDB = derive2 { name="RHSDB"; version="0.1.0"; sha256="1vhx5q19pi91283d20cc7950f01cqq8frbmxaf9kvxbv6pijhdk9"; depends=[]; }; RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; }; + RHclust = derive2 { name="RHclust"; version="1.0.0"; sha256="159cwlz1h8jvm96mkx4s68q6mqhpiykf23b4bhpxx9vk0qxpyl89"; depends=[Runuran]; }; + RHybridFinder = derive2 { name="RHybridFinder"; version="0.2.0"; sha256="0g8kvzir8kfgg3ifww164lbqhsi2yw3dp80r68g36vxfzy11y230"; depends=[doParallel foreach seqinr]; }; RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; - RIA = derive2 { name="RIA"; version="1.5.0"; sha256="1zf6b8yjyhwr98k8xrdrv3g415kiqgb5s2gnpvy6shjxjhwf9qb6"; depends=[nat oro_dicom oro_nifti]; }; + RIA = derive2 { name="RIA"; version="1.6.0"; sha256="0vj92plwmklb0i9h6zr18dnfwi3p7wkajjjxg0vfvm4pps9pkfwp"; depends=[nat oro_dicom oro_nifti reticulate]; }; RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; RISCA = derive2 { name="RISCA"; version="0.9"; sha256="0fq474xv8dcj548wm3dydz70cgvmgrz3h8q1mlzyrxbbwrvzx8wm"; depends=[caret date doParallel foreach glmnet kernlab MASS mvtnorm nlme nnet relsurv statmod SuperLearner survival]; }; - RISmed = derive2 { name="RISmed"; version="2.2"; sha256="0nwixhngi4r2f73362salivsmsf7l52bm13jqvhdq8mfiigm80vd"; depends=[]; }; + RISmed = derive2 { name="RISmed"; version="2.3.0"; sha256="0vpi88gzi9r85v6nhjz9jbw671zkrmyazwna2z881346wfyr3l8b"; depends=[httr xml2]; }; RIdeogram = derive2 { name="RIdeogram"; version="0.2.2"; sha256="0wvzlnisnxwzdzfh8ph4yspr8abi5qk6p4z2qa14ykzn8yry61ni"; depends=[ggplot2 grImport2 rsvg scales tidyr]; }; RImageJROI = derive2 { name="RImageJROI"; version="0.1.2"; sha256="1rsc8iv80zyjzpj80yyyhndxvskdbldsfc2gskrr1r8yh5gmhn23"; depends=[spatstat spatstat_geom]; }; RImagePalette = derive2 { name="RImagePalette"; version="0.1.1"; sha256="054w8xzsn330qg7piq6ajhji9na2swkkdis2567cy3q099npfl5v"; depends=[ggplot2]; }; @@ -3774,23 +3910,23 @@ in with self; { RInside = derive2 { name="RInside"; version="0.2.16"; sha256="03iabanmj5xkgq7r1n1rkmzjf2zz484637nmd1qg61ga53hsvr3s"; depends=[Rcpp]; }; RItools = derive2 { name="RItools"; version="0.1-17"; sha256="1shcvkgsyjk9jmpf7icj1zjlvmqa11scmymc8cycnffax604frbm"; depends=[abind SparseM survival svd xtable]; }; RJDBC = derive2 { name="RJDBC"; version="0.2-8"; sha256="1qfq1vjlxhg3hmb1169zkss7kng74jhjninqkfr3cca8x1fq9593"; depends=[DBI rJava]; }; - RJDemetra = derive2 { name="RJDemetra"; version="0.1.6"; sha256="1s2kvncc35fp2qig781rsw8w1nc9xvlwbpyhb3xqydlsrh89rvqg"; depends=[rJava]; }; + RJDemetra = derive2 { name="RJDemetra"; version="0.1.7"; sha256="0qyy8sssj15aq6kk0dmbac8an7nnnlihs28lkx5016gg84l0acs5"; depends=[rJava]; }; RJSDMX = derive2 { name="RJSDMX"; version="2.3-3"; sha256="02lbg82g4abng5vcn2g8ghvmg69q35my8smnbvd09yvha8hb49ps"; depends=[rJava zoo]; }; - RJSONIO = derive2 { name="RJSONIO"; version="1.3-1.4"; sha256="141ijm9570mg1180isvi0jb9vd3b08s5gb9dl1wa5v0m3s9jq52l"; depends=[]; }; + RJSONIO = derive2 { name="RJSONIO"; version="1.3-1.6"; sha256="17x0ayk7daprbc8w2hvb2jl9mfnw4dic9yc3sr5adcjqfzmcklc2"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; RJafroc = derive2 { name="RJafroc"; version="2.0.1"; sha256="1vrjnqn1lv10945ba29zjlbkh3zyw28ppv4093v24lirw8vzmjp4"; depends=[bbmle binom dplyr ggplot2 mvtnorm numDeriv openxlsx Rcpp readxl stringr]; }; - RJcluster = derive2 { name="RJcluster"; version="2.5.0"; sha256="0xngs3kn3r9d7n5m7fjclhxhk7ky80j23g8gd3kbalas1hkmlfgp"; depends=[foreach infotheo matrixStats mclust profvis Rcpp RcppArmadillo rlang]; }; + RJcluster = derive2 { name="RJcluster"; version="3.2.2"; sha256="16p7c3c63kyqfkjrblf9p2nhaf03aq8ffn0pyah7rpv2qdvj7iyc"; depends=[foreach infotheo matrixStats mclust profvis Rcpp RcppArmadillo rlang]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-4"; sha256="1j4643xc8k3zy4rv0h8dd154jafihnjr43wzz3d93j11g2w9xhq3"; depends=[rJava]; }; - RKEEL = derive2 { name="RKEEL"; version="1.3.2"; sha256="120x49zblhs7grqj919m3ll9q5ddr3kkqicy1am5b8hahybiz5al"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; + RKEEL = derive2 { name="RKEEL"; version="1.3.3"; sha256="1m9jxi7nwkjaq172rx28fk73i144bny2h4aliqkvg2ffsdjyi685"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; RKEELdata = derive2 { name="RKEELdata"; version="1.0.5"; sha256="1swzqw6j006ya48ahg6n1g8faxhqiv9v5q1zrnihpzj6868lf7y3"; depends=[]; }; RKEELjars = derive2 { name="RKEELjars"; version="1.0.19"; sha256="1a879b0xq5jk7r2pf4n41nm0c4himl4yqw083xh2ha4qdhab5kq0"; depends=[downloader]; }; RKHSMetaMod = derive2 { name="RKHSMetaMod"; version="1.1"; sha256="1h8gqqfmlrzyj4n997yn13vqpaw2kwzl45gscy3fdhskzmyg0ss3"; depends=[Rcpp RcppEigen RcppGSL]; }; RKUM = derive2 { name="RKUM"; version="0.1.1"; sha256="1w0v6l61dm7xixnyywsc7xziixz7k9r1ja26zcy77nry5kn6v60q"; depends=[]; }; RKelly = derive2 { name="RKelly"; version="1.0"; sha256="0mkpc95j67rg2gcj2fc4w8kv4v31cpiyvh660y8kc2fjr5q4aj3l"; depends=[]; }; - RKorAPClient = derive2 { name="RKorAPClient"; version="0.6.1"; sha256="00cp8v4xhl6442ci3yr9y21s0k2zzxqcdblijrg99mza2w039gqw"; depends=[broom dplyr ggplot2 highcharter httr jsonlite keyring lubridate magrittr PTXQC R_cache tibble tidyr]; }; + RKorAPClient = derive2 { name="RKorAPClient"; version="0.7.1"; sha256="0caqj4dj6pnjzkaa3xjxblwwypff3fksv6cgkg7dxg0qznkyac7g"; depends=[broom dplyr ggplot2 highcharter httr jsonlite keyring lubridate magrittr PTXQC purrr R_cache stringr tibble tidyr urltools]; }; RLRsim = derive2 { name="RLRsim"; version="3.1-6"; sha256="1wkkibr250frsbfq70m9jdrylxb492zibf5w03z6zis98pjffssp"; depends=[lme4 mgcv nlme Rcpp]; }; - RLT = derive2 { name="RLT"; version="3.2.2"; sha256="1a8cip975z99g8ljng4y86wv1gf1xwg0sqnxz79wj6zxpw8fk37c"; depends=[]; }; + RLT = derive2 { name="RLT"; version="3.2.3"; sha256="0zaha6fgj3j5524w8mym0p4dyg1z8z9mkz4hm9xbjz0ybrmfqr8h"; depends=[]; }; RLeafAngle = derive2 { name="RLeafAngle"; version="1.0"; sha256="1anks22hn6qpac556p99kilkhc80h572dvcyz3wj1nqffdrhgrh3"; depends=[]; }; RLogicalOps = derive2 { name="RLogicalOps"; version="0.1"; sha256="1qyn80x3x3bb5wgzyzw6pxs8a6q26yq1fkmkz7f5wywsnrj8hzfj"; depends=[rstackdeque stringr]; }; RLumCarlo = derive2 { name="RLumCarlo"; version="0.1.7"; sha256="1r70d68y3l43pb47wxhhbgbirnnx0hyaklvphlqrhnlkxp04r4xk"; depends=[abind doParallel foreach khroma magrittr Rcpp RcppArmadillo scatterplot3d]; }; @@ -3801,6 +3937,7 @@ in with self; { RM2006 = derive2 { name="RM2006"; version="0.1.1"; sha256="1bx2y58c8fkpv0d1sn5abxbajks3sbz2v00idnvbp7rw1i05i5q4"; depends=[]; }; RMAT = derive2 { name="RMAT"; version="0.2.0"; sha256="15bn9smlw9czryh6dvkpqxcp25sqd1vfq2cbs8wpg7nq58xyc6y4"; depends=[dplyr magrittr purrr]; }; RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.7"; sha256="10hgssy59fcjbv333grpf6f3m7924hav66xxqhdlsdnwix19q7sb"; depends=[chron date vars]; }; + RMBC = derive2 { name="RMBC"; version="0.1.0"; sha256="1fqbr28d09j01rmr9gylzkpvrd6bc9rnjbyzv06hmlx5mmjmzkb4"; depends=[ktaucenters MASS mvtnorm]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; RMLPCA = derive2 { name="RMLPCA"; version="0.0.1"; sha256="1xzh6fwl71dzdpbqgpkqnmdzdk8rblg6n1ddic5yxxfvzg3bh13x"; depends=[Matrix pracma RSpectra]; }; RMOA = derive2 { name="RMOA"; version="1.0.1"; sha256="1ppbwqdfxzk1ayms0rqw22l0r8vkk8av39spwpq8avgl6vssw8c4"; depends=[rJava RMOAjars]; }; @@ -3810,16 +3947,17 @@ in with self; { RMTL = derive2 { name="RMTL"; version="0.9"; sha256="08da67wvzmibziqhnlzh43sydaihk4rsq2k5hs6ih3jkkidrhlgv"; depends=[corpcor doParallel foreach MASS psych]; }; RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; + RMVL = derive2 { name="RMVL"; version="0.0.3.0"; sha256="0la0a4d59vx776zqin8wkkldjbzplbhpr79whx85qbvywzlw43sk"; depends=[]; }; RMaCzek = derive2 { name="RMaCzek"; version="1.3.5"; sha256="19hb25rl4fmyyaklj0jlvdh41zg9k2d6hkmm4ixvh8y9dbp675c8"; depends=[GA seriation]; }; RMallow = derive2 { name="RMallow"; version="1.1"; sha256="1s6a3347739rfc8rrh2773b278gcbp8hf5j5psm61fz7bavy9gcj"; depends=[combinat]; }; - RMariaDB = derive2 { name="RMariaDB"; version="1.1.1"; sha256="03i2fiix9dvask03q1629njb9457x9dh03r1iwvlkwn7crn6mjxn"; depends=[bit64 DBI hms lubridate plogr Rcpp]; }; + RMariaDB = derive2 { name="RMariaDB"; version="1.1.2"; sha256="1p8fghpi2nrccv9iz3agr1aiapbkq7irl7vdgr9yaskm940cp0g9"; depends=[bit64 DBI hms lubridate plogr Rcpp]; }; RMark = derive2 { name="RMark"; version="2.2.7"; sha256="0qxa383cagzqrnfc3izybb4lrg8z1r3nw1j5b7h4wkjwy0k3kczb"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; RMixpanel = derive2 { name="RMixpanel"; version="0.7-1"; sha256="1xwmmfvky49n1l0w3kwcyaf2h4rhzz4k5icjwvpc90fqk8sxib6a"; depends=[base64enc jsonlite RCurl uuid]; }; RMixtComp = derive2 { name="RMixtComp"; version="4.1.3"; sha256="0v1qhqvl0s2b93xhykjr99h5gbz48l9npp0vyazh0ncx8gnxrzfl"; depends=[ggplot2 plotly RMixtCompIO RMixtCompUtilities scales]; }; RMixtCompIO = derive2 { name="RMixtCompIO"; version="4.0.6"; sha256="1r0za8s31mk9d3vgvsj930qpy5xnzdfgz06fjg5qzzc2l6jp96k3"; depends=[BH doParallel foreach Rcpp RcppEigen]; }; RMixtCompUtilities = derive2 { name="RMixtCompUtilities"; version="4.1.4"; sha256="1rhdmiap7xm96igclas67dz8naywjkddydbk9m3hp0d0zhgblc5i"; depends=[ggplot2 plotly scales]; }; - RMySQL = derive2 { name="RMySQL"; version="0.10.21"; sha256="0cbb5ln9iigl816nzvsls9zil5qlfr8yv2aginapqv6n69nz0srs"; depends=[DBI]; }; + RMySQL = derive2 { name="RMySQL"; version="0.10.22"; sha256="05hiwqakhz11kra24yyxrss8b8n32wg7k39j7hwdnvhh1n96scnl"; depends=[DBI]; }; RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.4"; sha256="16ab0p0378j4vvcazynffsgx1rq32llf1sz4h4pp5lrx820j6qvx"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; RNAsmc = derive2 { name="RNAsmc"; version="0.6.0"; sha256="0q4b24baabzx41zqygy6l2jnyzc4m7knmlnhra4hhc5f5cl5ab8r"; depends=[circlize RRNA]; }; RNAstructureModuleMiner = derive2 { name="RNAstructureModuleMiner"; version="0.1.0"; sha256="026r1h4z1jdfww0ay9iixa77ax6b19pgp589bbn77xg1vwjjlbsk"; depends=[RRNA]; }; @@ -3833,19 +3971,20 @@ in with self; { RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; RNeXML = derive2 { name="RNeXML"; version="2.4.5"; sha256="1wsl4xq9w5bp3wk69dw57bg0qcw1vs6ajwya4p0w1r00ck5pwrib"; depends=[ape dplyr httr lazyeval plyr reshape2 stringi stringr tidyr uuid XML xml2]; }; RNentropy = derive2 { name="RNentropy"; version="1.2.2"; sha256="0chvmrvpyyghilwb63y6pd1zp94i5qhpv5w19x9nw0ypk86pp2dj"; depends=[]; }; - RNetCDF = derive2 { name="RNetCDF"; version="2.4-2"; sha256="14jgqp3ynf1ndkzbwx7xmxd9gimjigm4012mrn9p076xd2y4qxci"; depends=[]; }; + RNetCDF = derive2 { name="RNetCDF"; version="2.5-2"; sha256="0i5a0v6ajabn59y73sbm5j85ppgpchr1ggm27xl8m4x07jj4dzpq"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; RNewsflow = derive2 { name="RNewsflow"; version="1.2.6"; sha256="06hz5fim5ad8kbpc4crs9vdn7k9q5phhzscd46s4xk0b3n0i8wi1"; depends=[data_table igraph Matrix quanteda Rcpp RcppEigen RcppProgress scales stringi tm wordcloud]; }; - RNifti = derive2 { name="RNifti"; version="1.3.0"; sha256="1zr0q79id62csmc30c7gs4hbmavk8n6p50a981sfz51dczhjj5ny"; depends=[Rcpp]; }; + RNifti = derive2 { name="RNifti"; version="1.3.1"; sha256="0bz10ar6hrgkvlzh9j2im24kwi3s2nnax668z40a2wj6s5xghqlr"; depends=[Rcpp]; }; RNiftyReg = derive2 { name="RNiftyReg"; version="2.7.0"; sha256="0y7s2zcjjnb9jakdhyd6hmdj9axdpvbnhijs2finnlwc0d09jpz1"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROCR = derive2 { name="ROCR"; version="1.0-11"; sha256="0amvvrkiflmr3qygrsgrsja4gaf2v6r6h6i2bgpsm8r069vmlf2p"; depends=[gplots]; }; ROCS = derive2 { name="ROCS"; version="1.3"; sha256="11vdf8701ap6ya7c7kx9jhvg7qfc6vkij3jridna6f4xj384grki"; depends=[poibin rgl]; }; + ROCaggregator = derive2 { name="ROCaggregator"; version="1.0.1"; sha256="1l53z1xz5ww0bdd3pcmscmm4ypg0fdl4a03vv8ya2jk0zzlndlnq"; depends=[magrittr]; }; ROCit = derive2 { name="ROCit"; version="2.1.1"; sha256="0sd6ckh7k8aqwhzzp3qff6g7d03klbr0mbp403pib3823c8pqa55"; depends=[]; }; ROCket = derive2 { name="ROCket"; version="1.0.1"; sha256="1p5b1408fdq8z64b7ihwcdxprg5rfiq4z5annxzvmizzr6qwn8qa"; depends=[data_table]; }; ROCnReg = derive2 { name="ROCnReg"; version="1.0-5"; sha256="1j8q2za0mia8z1f3n71f9k4q2c1pkjqss5279ryawfzq6zy347k0"; depends=[lattice MASS Matrix moments nor1mix np pbivnorm spatstat spatstat_geom]; }; ROCpsych = derive2 { name="ROCpsych"; version="1.3"; sha256="0fcrhhxmvrrchbswb94liahbgz5pfhs86fbj0vby7vnakrhngh7v"; depends=[pROC reportROC]; }; - RODBC = derive2 { name="RODBC"; version="1.3-17"; sha256="1xq4lzx1a09lmnd2lwj5z099z3pfg3r7y2da7rf4sd2wyqswi7s6"; depends=[]; }; + RODBC = derive2 { name="RODBC"; version="1.3-19"; sha256="1zjf5mfv906kxy4cn2l10z35l7m5878aqjx9yj6pr2ydfxlbvz1s"; depends=[]; }; RODBCDBI = derive2 { name="RODBCDBI"; version="0.1.1"; sha256="0jkcc1lm8drsx1pkfj5h6rlbr98cgpvbf9ndzdwr048f3s8gd26i"; depends=[DBI RODBC]; }; RODM = derive2 { name="RODM"; version="1.1"; sha256="0cyi2y3lsw77gqxmawla5jlm4vnhsagh3ykdgb6izxslc4j2fszx"; depends=[RODBC]; }; ROI = derive2 { name="ROI"; version="1.0-0"; sha256="0hd3l219wanhanbf4pgrh1pbxah50gf5qg2gff1djdr1xns7zn5h"; depends=[registry slam]; }; @@ -3859,7 +3998,7 @@ in with self; { ROI_plugin_ecos = derive2 { name="ROI.plugin.ecos"; version="1.0-0"; sha256="0wdb86r0z0ck27mn0rfb5l72xq7km2annyk5c5n8nk460j0kygqf"; depends=[ECOSolveR Matrix ROI slam]; }; ROI_plugin_glpk = derive2 { name="ROI.plugin.glpk"; version="1.0-0"; sha256="0i5l0k5mk2xp2gdvpmlgxjycvzmgc83rkind68ab4x1d4bab0qdk"; depends=[Rglpk ROI]; }; ROI_plugin_ipop = derive2 { name="ROI.plugin.ipop"; version="1.0-0"; sha256="00xjariraga2j4zk6vyzwl5g4a65ki1jmky556hizma78ksjrikv"; depends=[kernlab ROI slam]; }; - ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="1.0-0"; sha256="1cr52sj0nj2bv9bfmm0pcb9bs2376fwyslxd15hyqq88la5y42iy"; depends=[lpSolveAPI ROI]; }; + ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="1.0-1"; sha256="1h59ckq7rb94z69295138nph9k73zrvia0s4kppb80anq0khkjsg"; depends=[lpSolveAPI ROI]; }; ROI_plugin_msbinlp = derive2 { name="ROI.plugin.msbinlp"; version="1.0-0"; sha256="1f7wbzp87zq0css7jpphb96kbyan2lxzynnrcvl3hyn5cqmdcsqd"; depends=[ROI slam]; }; ROI_plugin_neos = derive2 { name="ROI.plugin.neos"; version="1.0-0"; sha256="1q6xj1wg8241lbr9cynx9d4ilh19441qzn3nbqhj4lhpmg423h0p"; depends=[ROI xml2 xmlrpc2]; }; ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="1.0-0"; sha256="11dgya755w6h7dkxvdhx8aqz3g0dfxw67g5fwag0fszwb2hfblkx"; depends=[nloptr ROI]; }; @@ -3872,23 +4011,22 @@ in with self; { ROMDB = derive2 { name="ROMDB"; version="0.1.0"; sha256="14jijcqd2zmps8sacx5nwfclj5yvqf4nx72y8pfvr0nswqqb895i"; depends=[dplyr httr magick purrr RODBC stringr]; }; ROOPSD = derive2 { name="ROOPSD"; version="0.2.5"; sha256="11cm9bnp0355vfwwlb4x4x3vh2z8k28fjms8ah6pah59x0i536i8"; depends=[Lmoments R6]; }; ROP = derive2 { name="ROP"; version="1.0"; sha256="12gh83r3hp1qdmw3p5rr1wfhsh90pirx67q456gl9ai6zgd8nkq8"; depends=[ROCR]; }; - ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; + ROSE = derive2 { name="ROSE"; version="0.0-4"; sha256="0y3v9zkgaxpv4f4zn22ra1gkkqg5hdz8js47ppciqahfydjbfl3p"; depends=[]; }; ROlogit = derive2 { name="ROlogit"; version="0.1.2"; sha256="09j9c24f7plzpnnhpmzdi4gapb7w1377ksjwk6i2xpyr4bfsrr5k"; depends=[evd survival]; }; - ROpenCVLite = derive2 { name="ROpenCVLite"; version="4.51.0"; sha256="0fi726kan77lwc1jfkgypb58vndrm89pdn80pjyih6sh695cips2"; depends=[pkgbuild]; }; + ROpenCVLite = derive2 { name="ROpenCVLite"; version="4.52.0"; sha256="1vm50h7ys24az57pbnpgkzkpkdbvhb98rm09yb3z0wvnwyx7k8qv"; depends=[pkgbuild]; }; ROpenDota = derive2 { name="ROpenDota"; version="0.1.2"; sha256="17s73yj2w5hlpy09ad83m4s2d9shg5h4zg64wvbp1ivyvpp7l308"; depends=[jsonlite RCurl]; }; ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; ROptEst = derive2 { name="ROptEst"; version="1.2.1"; sha256="0gjdgynmg8499jm5gbnmjipnn1bl7h1rja8lhgbaw48lmq5sr801"; depends=[distr distrEx distrMod MASS RandVar RobAStBase startupmsg]; }; ROptEstOld = derive2 { name="ROptEstOld"; version="1.2.0"; sha256="08njyxb8bnjb9nas3szqvqkfv83lc0187b7biis2nl2rgq6rljzy"; depends=[distr distrEx evd RandVar]; }; ROptRegTS = derive2 { name="ROptRegTS"; version="1.2.0"; sha256="1wy54kjrpfvj2k9ndmq27zzgx6aygh85f7c83g7gn8d5b2y91qy4"; depends=[distr distrEx RandVar ROptEstOld]; }; - ROptSpace = derive2 { name="ROptSpace"; version="0.2.2"; sha256="09crzp3anw9p9fknw9gv8kzk1gmmdw0hbw1fa2r8i6601xi81ap4"; depends=[Rcpp RcppArmadillo Rdpack]; }; + ROptSpace = derive2 { name="ROptSpace"; version="0.2.3"; sha256="18fz285hr4fdkkbs4b13gmwz0sqbgk6di6m3c6ic0wvs35mpmcfz"; depends=[Rcpp RcppArmadillo Rdpack]; }; ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; RPANDA = derive2 { name="RPANDA"; version="1.9"; sha256="16qhv4zwwrjrjxr06pimjprb74gbzpq2hkii27abln6a62m3z4kb"; depends=[ape bipartite cluster coda corpcor deSolve fields fpc geiger glassoFast igraph Matrix mvMORPH mvtnorm phytools picante pracma pspline pvclust raster Rmpfr TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; - RPEClust = derive2 { name="RPEClust"; version="0.1.0"; sha256="1ysw45335lrxmj3j17xyvgz76p00v80f2m7wxfndh91wklqxzm8r"; depends=[clue clusteval mclust]; }; - RPEGLMEN = derive2 { name="RPEGLMEN"; version="1.1.0"; sha256="0pqfmrnyyxivrzm4xzhma6wrb3zhy34chdalcg8hw5wy92y9gzhd"; depends=[Rcpp RcppEigen RPEIF]; }; - RPEIF = derive2 { name="RPEIF"; version="1.2.0"; sha256="1lkj6jwra1ydyxbadlic16nsbc0cnha2p4i6ksjrwbhiagy56bh8"; depends=[xts zoo]; }; - RPESE = derive2 { name="RPESE"; version="1.2.0"; sha256="01k0kg4zy9kyasv8g1gdq650abj5sq0mcfan3pc3knxlscdsl5cd"; depends=[boot RobStatTM RPEGLMEN RPEIF xts zoo]; }; + RPEGLMEN = derive2 { name="RPEGLMEN"; version="1.1.1"; sha256="1hm68f6ipiy2518viz182psqgh5krq9aihid0njg4817cyssg95z"; depends=[Rcpp RcppEigen RPEIF]; }; + RPEIF = derive2 { name="RPEIF"; version="1.2.3"; sha256="05j0ivn5020akfk3jjr0pnlk3wngmgr841vipl3nk194505ybvhi"; depends=[xts zoo]; }; + RPESE = derive2 { name="RPESE"; version="1.2.4"; sha256="0m80b5k0jq0yglb9gnzxl4h8j5y9ir2npni7gdwil2kw6nnhrb3f"; depends=[boot RobStatTM RPEGLMEN RPEIF xts zoo]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.2"; sha256="1dwblpfm0s4axiggwh4lbz5k1dz7i0d1nqzl70kxj5gnajm7gn1k"; depends=[]; }; RPEnsemble = derive2 { name="RPEnsemble"; version="0.5"; sha256="013dka8f8x9z84j3956l4h6c3afqs0ml14pzpzlsgh5ikby3jhbx"; depends=[class MASS]; }; RPMG = derive2 { name="RPMG"; version="2.2-3"; sha256="1di2bcf58z6gc3xknzx35znsjsy1714swvxkdhlq1ljidbdbmmbl"; depends=[]; }; @@ -3897,50 +4035,50 @@ in with self; { RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; }; RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.7"; sha256="16xppv7pzqk6kriqd5ym313z1r61l13dzpxp2q2zi0ai23hjgg92"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; RPS = derive2 { name="RPS"; version="1.0.1"; sha256="16n6wknw2m56kwi6rswgxjwjqblhaz5gyw94f96a7l6navqnvlp4"; depends=[ape geomorph Gmedian igraph MASS matlab]; }; - RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; - RPostgres = derive2 { name="RPostgres"; version="1.3.2"; sha256="074dp69nza17y46g67swylqnhmsl8kd4zh0zqi4pnszgqj60kykc"; depends=[bit64 blob DBI hms lubridate plogr Rcpp withr]; }; - RPresto = derive2 { name="RPresto"; version="1.3.5"; sha256="1fhgiin5fa83gp2lnqhzlg41dy2l0zcvwfy7s73cl4rwkk2x4q1p"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; + RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.7"; sha256="1bqfdbs09f65ssc6bx4z3kkmia8ja6qbnijxizw63p0fbcakq2q4"; depends=[DBI]; }; + RPostgres = derive2 { name="RPostgres"; version="1.3.3"; sha256="0a3f7l1c0q732g8shys6g8f3nq2y3q7p840i0wdbyq0i243srfz0"; depends=[bit64 blob DBI hms lubridate plogr Rcpp withr]; }; + RPresto = derive2 { name="RPresto"; version="1.3.7"; sha256="1iyprqlr0c73j63p0bc98bfq6dcmm1kzcj86q4y34vvwjqcbb99c"; depends=[DBI httr jsonlite openssl purrr Rcpp stringi]; }; RProbSup = derive2 { name="RProbSup"; version="3.0"; sha256="1z53zgx26fwfhb1vxad0l51v34y2lsplhwbjaf4r44rngdaw9h5n"; depends=[]; }; RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.17"; sha256="0krbxalcfg47cmrwfajgbhmn6rs687ranaiq5j0daw7a1k4qdfd8"; depends=[Rcpp RCurl]; }; RPscoring = derive2 { name="RPscoring"; version="0.1.0"; sha256="063w83k9krwv3wvw2iq8bqkhjaj26as14d9g99l8jxfc02ljv1rr"; depends=[]; }; - RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; + RPtests = derive2 { name="RPtests"; version="0.1.5"; sha256="04j4nqy2qxn1pa8ar0j0wgzkpd624983wwhd73l1ax7fnskx0yhh"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; RPushbullet = derive2 { name="RPushbullet"; version="0.3.4"; sha256="1mx433hvx660a63s5dzn655zmqv1c1qij0hzddl9z38032brc4ii"; depends=[curl jsonlite]; }; RPyGeo = derive2 { name="RPyGeo"; version="1.0.0"; sha256="1alqgx6blqqwxm76w05g82kc2icx8nvjw7qkdz73gf9ckgza5bb3"; depends=[magrittr purrr raster reticulate rmarkdown sf stringr]; }; RQEntangle = derive2 { name="RQEntangle"; version="0.1.3"; sha256="178haddk8nnscy2vym3k2a3ca9lf6nl7rpjja8lxqdjninvhvwb2"; depends=[iterators itertools]; }; - RQuantLib = derive2 { name="RQuantLib"; version="0.4.12"; sha256="1bmjgsdwivrvdysba4hq60xpp7xg1c0p1p05mdm0338zvzix5kb8"; depends=[Rcpp zoo]; }; + RQuantLib = derive2 { name="RQuantLib"; version="0.4.13"; sha256="08nmrc8sk18v6rzmwjyv0zqgawsqswhbyqsrac1shrmd7lg9q6cw"; depends=[Rcpp zoo]; }; RRBoost = derive2 { name="RRBoost"; version="0.1"; sha256="0zp3csrpi0awk88m6sq5sf5v7j32q5sd4mwv61x6bblg991k404k"; depends=[RobStatTM rpart]; }; RRF = derive2 { name="RRF"; version="1.9.1"; sha256="135adnf7cfs8gddmmmgmzarjzg0qfrd7l67367yhy2b1k0s5ng1w"; depends=[]; }; RRI = derive2 { name="RRI"; version="1.1"; sha256="0msdc5j5vx4snl8r3q5nn0mw2i80jds5pjykhmigcrx6jzg6h6i7"; depends=[Rcpp RcppArmadillo]; }; + RRMLRfMC = derive2 { name="RRMLRfMC"; version="0.4.0"; sha256="0y8gs9rirrcjb89jqxr7rrp89pjal7lzcscnh4kmabhih3f2d729"; depends=[nnet]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; RRPP = derive2 { name="RRPP"; version="1.0.0"; sha256="0bnnihbal8w8ayh4s1igdpk3nkwaz5mqp5z4j1snd2ipyx2cy9p7"; depends=[ape ggplot2 Matrix Rcpp]; }; RRRR = derive2 { name="RRRR"; version="1.1.0"; sha256="0h5r668qn8hp4j4zhxhn4b3lqm138n6kc1c7vf95hmbh4ah6wzf7"; depends=[expm ggplot2 magrittr matrixcalc mvtnorm]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.4"; sha256="16v6f5yvfq9l1b4h5mr4y0i2k404vdv354yz4k780w79qib7g39p"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; - RRphylo = derive2 { name="RRphylo"; version="2.5.0"; sha256="0bhb4j1sxbww4y6hxi61p0s5npa999lz1x3qjgynzwfaf55p7hvj"; depends=[ape doParallel emmeans foreach geiger phytools]; }; - RRreg = derive2 { name="RRreg"; version="0.7.1"; sha256="1mzc9ga5jdh3cf95bxbfy6kdxvqcca74v4hszb63jalzp8w624r9"; depends=[doParallel foreach lme4]; }; + RRphylo = derive2 { name="RRphylo"; version="2.5.8"; sha256="03nknmqp65ialb7xl4gfxb8zfcjhybqfgrkj4p2p1xla1s0gwxb9"; depends=[ape doParallel emmeans foreach geiger phytools]; }; + RRreg = derive2 { name="RRreg"; version="0.7.3"; sha256="1nk2gg41bdhfnz7plkj4rnzl40sd6jd5z9843kxijp9ymagimwx4"; depends=[doParallel foreach lme4]; }; RSA = derive2 { name="RSA"; version="0.10.4"; sha256="0i0li587i6bjnmz9d1j1dyhpy7bfnq6298wr67fygcxfaszij16b"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="1.3.0"; sha256="1y1zhy2bxkfsv8vmnxjdg9i5rqkvs32kw8h5z1mclv953srgkpn9"; depends=[gstat magrittr plyr rgdal shapefiles stringr]; }; RSAlgaeR = derive2 { name="RSAlgaeR"; version="1.0.0"; sha256="1hp0v2vkj9ixiv541d53kyl0ph3jsdc5w98r81gv5ck5ixrp6bxp"; depends=[cvTools ggplot2 hydroGOF lubridate mblm plyr]; }; RSBJson = derive2 { name="RSBJson"; version="1.1.2"; sha256="1bzy0pgj6kg447xnnjj643hk8gyzzaaliiw0z98r19959bqbvgq3"; depends=[jsonlite]; }; RSCABS = derive2 { name="RSCABS"; version="0.9.5"; sha256="193wbf1v18xv098i6abpglb239788d9gjzqbn8p3aai0la6y1pk3"; depends=[gWidgets2 gWidgets2RGtk2 R2HTML RGtk2]; }; - RSCAT = derive2 { name="RSCAT"; version="1.1.0"; sha256="1sh80zlkwma88kssrlwvb6kpqs2dmhfzkck59fgp0xxgxa3vpram"; depends=[ggplot2 gridExtra Metrics rJava shiny shinycssloaders shinyjs]; }; + RSCAT = derive2 { name="RSCAT"; version="1.1.2"; sha256="1cvybykig8vbng4cq6ah8rxqjj5xypfc2jg7x1g70m4df9zxs397"; depends=[ggplot2 gridExtra Metrics rJava shiny shinycssloaders shinyjs]; }; RSDA = derive2 { name="RSDA"; version="3.0.9"; sha256="12ychaaa1n5gam93f5kpxsvsfc9x07znzzz9nrx8bsvgmq4znqf9"; depends=[dplyr e1071 FactoMineR forcats gbm ggplot2 ggpolypath glmnet kknn labelled magrittr neuralnet nloptr princurve purrr randomcoloR randomForest reshape RJSONIO rlang rpart scales sqldf stringr tibble tidyselect vctrs XML]; }; RSE = derive2 { name="RSE"; version="1.3"; sha256="1dvmj1zwkbp1dj9r8kcvbd8rpknfwfdqaqc5gfl82bh823w72099"; depends=[]; }; - RSEIS = derive2 { name="RSEIS"; version="3.9-3"; sha256="1wrpsf4cvm34r11ywssnbpcsi56sx4fykkqfhdfb5502agdy2w5w"; depends=[RPMG Rwave]; }; + RSEIS = derive2 { name="RSEIS"; version="4.0-3"; sha256="1kw28k6j7isl46wv1ysbkkccsdx1r55mgj1d6jylw9hpbn1pm7hh"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.2.2"; sha256="16s9iahbcdqykavm5cq8n76hlpfqlljl17xwh0vrz5ac7z4z3rdz"; depends=[MCMCpack]; }; RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; }; RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; }; - RSNNS = derive2 { name="RSNNS"; version="0.4-12"; sha256="1fa32wrhv3q0sdgrcrqrazvvylbn83d75bw8d0ncjfspf7dgx3di"; depends=[Rcpp]; }; + RSNNS = derive2 { name="RSNNS"; version="0.4-14"; sha256="081c20dcac8xxb0sp7kwzm4b7h5jrgcxxsfckjbxbda95g5n4qkz"; depends=[Rcpp]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; RSQL = derive2 { name="RSQL"; version="0.1.4"; sha256="0zda6cgsx1bd3xw2r9flsphbkrgma95qqv5vz70f234y9gkmc6v3"; depends=[DBI knitr lgr R6 RSQLite]; }; - RSQLite = derive2 { name="RSQLite"; version="2.2.7"; sha256="1j89n4ydv42y5hqqv8nz72sa5wncws074kg527s902k1a67s69ii"; depends=[bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; + RSQLite = derive2 { name="RSQLite"; version="2.2.8"; sha256="1hscgi11px9hq0sx78c2lkfzq121rlvmhxmqf305xg6lgqdxr2hv"; depends=[bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; RSSL = derive2 { name="RSSL"; version="0.9.3"; sha256="10rrgxc0ddnd4b4g7qqgpjkc8gh07bnc94xwmgdp1lx7v7ypcziv"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; RSSampling = derive2 { name="RSSampling"; version="1.0"; sha256="0p10l7qmksx4ysz1jb84f9nbqzig8wxhwy33yk8hq29nb5i4c9ik"; depends=[LearnBayes]; }; - RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; RSarules = derive2 { name="RSarules"; version="1.0"; sha256="0lrql4q45hyhqbix86ixl12mknnjbz3137gx2zkvqpz91bsk145j"; depends=[arules Matrix]; }; RSauceLabs = derive2 { name="RSauceLabs"; version="0.1.6"; sha256="1p7hw6vnlg6w5ggmfpc3q3s6n1fikjkjnxzz97jifiy0zwn5dp9i"; depends=[data_table httr jsonlite whisker xml2]; }; RScelestial = derive2 { name="RScelestial"; version="1.0.1"; sha256="10d2kxlqy224y6qypr7g3pnbv9bkrj22zi77wg7y646f5bzdz9qd"; depends=[Rcpp]; }; @@ -3948,12 +4086,12 @@ in with self; { RSeed = derive2 { name="RSeed"; version="0.1.60"; sha256="0rvb6w4z5c2wcdgx5w6vv7c8il8d0096pgv3fyvw21ag25z605jc"; depends=[graph RBGL sybil]; }; RSelenium = derive2 { name="RSelenium"; version="1.7.7"; sha256="1xn5fdbzmq7b1f5fc9ls23g177bmnd8bn4p4d8aafr6z3jwkmfir"; depends=[binman caTools httr openssl wdman XML]; }; RSentiment = derive2 { name="RSentiment"; version="2.2.2"; sha256="15d1llzxg1apkwykpb7pic2d5lfj9i9a55hab067wrz2yq5jsyfa"; depends=[NLP openNLP plyr stringr]; }; - RSiena = derive2 { name="RSiena"; version="1.2-23"; sha256="04picf0f9rahd37r9fm0cisgaiy2aqshnzfh7cvhcqfaqmpxc8kp"; depends=[lattice MASS Matrix]; }; + RSiena = derive2 { name="RSiena"; version="1.3.0"; sha256="1iar7dsy0qwscvb28yrzj864sjbqjn74s4byw1di1qh01iag4f60"; depends=[lattice MASS Matrix xtable]; }; RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.16"; sha256="1plcmxj6sahdy3vvcmxry8cbq1j23bqzhnhn593bkwmzczka24cy"; depends=[base64enc digest httr jsonlite plyr stringr]; }; RSizeBiased = derive2 { name="RSizeBiased"; version="0.1.0"; sha256="0qh1f9998c62cph590mszbwh12mpbvcnvffmxw4mib6wd4dgl723"; depends=[pracma]; }; RSmallTelescopes = derive2 { name="RSmallTelescopes"; version="1.0.4"; sha256="16c0pfq9qp0c9b7aljp753iilk3dys14h77anwps8xg7j2lizvbh"; depends=[]; }; RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.3"; sha256="02zswadv65a5p5q9rr12f819mh7jjqk8xj1kc1c0wqvr8dgz7fx9"; depends=[RCurl]; }; - RSocrata = derive2 { name="RSocrata"; version="1.7.10-6"; sha256="1pzdpy1mifr6hhhj7pq8l5jl8dsn6270ibm6pnmc66psh0xr2zsa"; depends=[httr jsonlite mime plyr]; }; + RSocrata = derive2 { name="RSocrata"; version="1.7.11-2"; sha256="0pwfz18931594n84b5l0y8bplqz5iw622ji4f2l9qkbg29jxq5gg"; depends=[httr jsonlite mime plyr]; }; RSpectra = derive2 { name="RSpectra"; version="0.16-0"; sha256="1ab45as2ysjrvkhvmx7y3nbhd0y1w4j9k2a789lcd973zz4wzwda"; depends=[Matrix Rcpp RcppEigen]; }; RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; }; RSqlParser = derive2 { name="RSqlParser"; version="1.5"; sha256="0q5wa7bq7m94xx8hcf9p29v5vvkrqzygs3v6yy5xl6jgvshvscvi"; depends=[stringi stringr]; }; @@ -3961,18 +4099,17 @@ in with self; { RStoolbox = derive2 { name="RStoolbox"; version="0.2.6"; sha256="1pq0vxq53x8f0358qfq1rakb59cdfi4micp7hjb9fbz95q9am8mj"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgdal rgeos sp XML]; }; RStorm = derive2 { name="RStorm"; version="1.0"; sha256="1n2kiy9b8w6rnv2zmzbl22grwibf619hadf2cjq1ch7rmbr7qb65"; depends=[plyr]; }; RStripe = derive2 { name="RStripe"; version="0.1"; sha256="0vp7zsd5xm8rf7196fivb76kkmxfx3gawxlyjhn9xqv92vawivra"; depends=[httr jsonlite RCurl]; }; - RSuite = derive2 { name="RSuite"; version="0.37-253"; sha256="18ddhv5wbwp9qx33zskf11q8c9grdyvm93y8lxd5jy245x5hgzph"; depends=[devtools git2r httr jsonlite logging processx roxygen2]; }; RSurveillance = derive2 { name="RSurveillance"; version="0.2.1"; sha256="02jbm9xl2jg9cgq53i1cvj1rivhprgd07k1rxsayzrskvbmvyjpd"; depends=[epiR epitools mc2d]; }; RSurvey = derive2 { name="RSurvey"; version="0.9.3"; sha256="0yk969jdvpgv01zbmk4zyxcmrbdizh37bddj1k128ndyf191z37x"; depends=[colorspace inlmisc MBA raster rgdal rgeos sp]; }; - RSvgDevice = derive2 { name="RSvgDevice"; version="0.6.4.4"; sha256="0vplac5jzg6bmvbpmj4nhiiimsr9jlbk8mzyifnnndk9iyf2lcmz"; depends=[]; }; RSwissMaps = derive2 { name="RSwissMaps"; version="0.1.0.1"; sha256="16sdd0115793yj74i9m64yfxxn3gkk4nvb0qk2w8j7jjbqhflis0"; depends=[downloader dplyr ggplot2]; }; RTCC = derive2 { name="RTCC"; version="0.1.1"; sha256="0bnm0qwikbbpq3i5q5fwmsgi8fn7w0xk993ngpiqbrf5my3h93kc"; depends=[matrixStats Rcpp testthat vegan]; }; RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; RTD = derive2 { name="RTD"; version="0.4.1"; sha256="0zsv62hx1y9q5a6rd8ri91ff64671b84jr3f88h0q4yni2mribhr"; depends=[dplyr httr jsonlite purrr RcppMsgPack readr urltools uuid]; }; RTDE = derive2 { name="RTDE"; version="0.2-1"; sha256="1dkv0g760384jmyypffl5kbnsancjx272j91ffpgmg3lmsy8nhqq"; depends=[]; }; RTIGER = derive2 { name="RTIGER"; version="0.99.0"; sha256="0g1qccjslf90lsc965klnkdkij16frfk3ig6yjpldh8j2yv66zg3"; depends=[e1071 GenomeInfoDb GenomicRanges ggplot2 IRanges JuliaCall qpdf reshape2 TailRank]; }; - RTL = derive2 { name="RTL"; version="0.1.6"; sha256="0f80sarkwslng7m68vjzis0y9zz77f0hvmj9fbpgkl683cvjcvcr"; depends=[dplyr fabletools feasts fitdistrplus forecast ggplot2 httr jsonlite lpSolve lubridate magrittr PerformanceAnalytics purrr Quandl quantmod RCurl readr rlang rugarch sp stringr tibble tibbletime tidyquant tidyr timetk tsibble xts zoo]; }; + RTL = derive2 { name="RTL"; version="0.1.8"; sha256="0rvwgw1cx7y9rxlnc0ijgyjp0raxslaqkxipi0183l0idlc4as53"; depends=[dplyr fabletools feasts forecast ggplot2 httr jsonlite lubridate magrittr plotly purrr RCurl readr rlang stringr tibble tibbletime tidyquant tidyr tidyverse timetk tsibble xts zoo]; }; RTOMO = derive2 { name="RTOMO"; version="1.1-6"; sha256="03jb96ahzgp662vj2v65giv8ss61vad5w26kvq8hg9q06z879jza"; depends=[GEOmap RPMG RSEIS splancs]; }; + RTTWebClient = derive2 { name="RTTWebClient"; version="0.1.2"; sha256="0r5nkaypym79h5r7n8h932i08awkpzn5fygww0z5q7y5m6kchbmx"; depends=[base64enc data_table digest httr jsonlite withr]; }; RTaxometrics = derive2 { name="RTaxometrics"; version="3.2"; sha256="0nrj5iccxqj3nk28s9z6bncpih5zq2nz4pylmm0pkpl5dfz923m4"; depends=[]; }; RTextTools = derive2 { name="RTextTools"; version="1.4.3"; sha256="0fxjviqc36k06rn8xzbi8ylzzj9zgf3zsp6xv0kssakss1a45lzz"; depends=[caTools e1071 glmnet ipred nnet randomForest SparseM tau tm tree]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; @@ -3981,9 +4118,10 @@ in with self; { RUVIIIC = derive2 { name="RUVIIIC"; version="1.0.19"; sha256="1px87p4nmdgkxwarsqyc91kmwr13dy16c1qqqc86qlwm2w46smf6"; depends=[progress Rcpp RcppEigen RcppProgress RSpectra]; }; RUnit = derive2 { name="RUnit"; version="0.4.32"; sha256="1wc1gwb7yw7phf8b0gkig6c23klya3ax11c6i4s0f049k42r78r3"; depends=[]; }; RVA = derive2 { name="RVA"; version="0.0.4"; sha256="1j5rdpa4w1k67xzjsja7ysd5j8r3dyvjvigfn7cas4alcdmafnsi"; depends=[circlize clusterProfiler ComplexHeatmap data_table dplyr edgeR ggplot2 ggpubr gridExtra GSEABase GSVAdata haven msigdbr org_Hs_eg_db plotly purrr rlang rWikiPathways stringr tibble tidyr XML]; }; - RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-79"; sha256="0ij5qr921gbwna63na4rws4bp68ri5q98cn63apnbsii07jzw716"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; + RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-80"; sha256="1c25nck6knllcbbvk9yp82l3mpk2gym0axmfla4i3brfvz9lbqn0"; depends=[ade4 boot car FactoMineR lme4 MASS mixOmics nnet pls pspearman vegan]; }; + RVCompare = derive2 { name="RVCompare"; version="0.1.5"; sha256="17ralm3xbzgi1ngblwf6pmpaz7c5vwkfinnpwyxvlrwi8mxi554h"; depends=[ggplot2 pracma Rcpp]; }; RVFam = derive2 { name="RVFam"; version="1.1"; sha256="0gw8rgq11zndnqmay6y3y5rmmljvwhxzm2pqa90vs5413dnchq92"; depends=[coxme kinship2 lme4 MASS Matrix survival]; }; - RVIpkg = derive2 { name="RVIpkg"; version="0.2.3"; sha256="02r576p17b3bmz4i839myvszrmnv0vdar4g094vqjaf5d8wflj0p"; depends=[]; }; + RVIpkg = derive2 { name="RVIpkg"; version="0.2.6"; sha256="1l8jr7295rway21d5qr73d30mb8chbh4h01d2n87ynklhfsf1xdf"; depends=[]; }; RVenn = derive2 { name="RVenn"; version="1.1.0"; sha256="016m00xv59lkwm2is32v5nr4lw5a1ymdnz34r3ffflcv9bfrc6n4"; depends=[ggforce ggplot2 magrittr pheatmap purrr rlang vegan]; }; RVerbalExpressions = derive2 { name="RVerbalExpressions"; version="0.1.0"; sha256="1p9wmpgqwnz95sr8km8y6kqax8fcz6sqg54wfdx44kiqkf1ybdsp"; depends=[magrittr]; }; RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; @@ -3997,8 +4135,8 @@ in with self; { RWekajars = derive2 { name="RWekajars"; version="3.9.3-2"; sha256="06nsylv65z9hxym1b6qnwllh306bq5phsgr0qn4nyr5im8cv1rhn"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-3"; sha256="0afrgflyfjv4jqm04had74zz4cs934zwvyxaan1r4qpg383kibpq"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; - RWmisc = derive2 { name="RWmisc"; version="0.1.0"; sha256="11k27db09zg7p72lhp1yva1g32bmbw1i4ys2wm7gi918jljjwm8v"; depends=[raster sf sp units]; }; - RWsearch = derive2 { name="RWsearch"; version="4.8.0"; sha256="0zbf03dhcmbyrs2yhl3phk65471qnd7iszvk9rn81fqhd522vq66"; depends=[brew latexpdf networkD3 sig sos XML]; }; + RWmisc = derive2 { name="RWmisc"; version="0.1.1"; sha256="1p2ksnwwbp5dhj4lmz09fbghs010p7nhpx039lc96n1h7y6azzqs"; depends=[raster sf sp units]; }; + RWsearch = derive2 { name="RWsearch"; version="4.9.3"; sha256="04r1h7qd71vadf641sllxxiypbf8xwa60pf3m683ply99v03bh3i"; depends=[brew latexpdf networkD3 sig sos XML]; }; RXKCD = derive2 { name="RXKCD"; version="1.9.2"; sha256="1yk12ic6kdbwc44ppag2yfnga7xjmifkglhvcw93vc3qg469mm15"; depends=[jpeg plyr png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; RXshrink = derive2 { name="RXshrink"; version="2.0"; sha256="105laxdjnqpkp74675asihcry6ahaihphkbnpxyi6xpskga0k1ka"; depends=[ellipse lars]; }; @@ -4006,11 +4144,11 @@ in with self; { RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; RZigZag = derive2 { name="RZigZag"; version="0.2.1"; sha256="1civ8qrk5y95775vzkd2m5arqczgan584r632ixy4q76nd5wa8zc"; depends=[Rcpp RcppEigen]; }; - RZooRoH = derive2 { name="RZooRoH"; version="0.3.0"; sha256="0k6xqd48ca2vq4sll9m51iyjqjqrm8kz0n3yi4q1r7czarj4nb5s"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; + RZooRoH = derive2 { name="RZooRoH"; version="0.3.1"; sha256="090mcy6czipvidprj87vyfb2wdipy08xjn130qzs5qdq9bnb6a14"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; RaJIVE = derive2 { name="RaJIVE"; version="1.0"; sha256="1r3csf3xpk6rx494bqamb9b8dhj1169cng6gdi52h62m8vchnak5"; depends=[doParallel foreach ggplot2]; }; RaMS = derive2 { name="RaMS"; version="1.0.0"; sha256="101vdghn18w2cj8n5bm1gd81c298w2drs1d2sjaijkji7i74z2c6"; depends=[base64enc data_table xml2]; }; RaProR = derive2 { name="RaProR"; version="1.1-5"; sha256="11hwg609pjcd13qnbchbs86c3q8f4nmh1xfxg3dsiijljl6lzx3n"; depends=[]; }; - RaSEn = derive2 { name="RaSEn"; version="2.1.0"; sha256="11bda14r5mzrvrlswvc5ycpjc064cs23njzsc3g8pm70kbsqfji5"; depends=[caret class doParallel e1071 FNN foreach formatR ggplot2 gridExtra KernelKnn MASS nnet randomForest ranger rpart]; }; + RaSEn = derive2 { name="RaSEn"; version="2.2.0"; sha256="07yi8bddlkay04gazid5yhk192pnr88l4i2bjj14f76gg151503n"; depends=[caret class doParallel e1071 FNN foreach formatR ggplot2 glmnet gridExtra KernelKnn MASS ModelMetrics nnet randomForest ranger rpart]; }; RaceID = derive2 { name="RaceID"; version="0.2.3"; sha256="19mbi56n80zirl8xzk5f1fqjcw9s1362vjmz62w1sh3cvilryldw"; depends=[cluster coop FateID FNN fpc ggplot2 ica igraph irlba locfit MASS Matrix matrixStats pheatmap propr quadprog randomForest RColorBrewer Rcpp Rtsne umap vegan]; }; RadData = derive2 { name="RadData"; version="1.0.1"; sha256="053i6r0j58dws1qisl2701n0fwzrfn5brdx3dcab8xmpzg6s0036"; depends=[]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.5"; sha256="0yz2pzcpz32xs04xfs90i714nn28cky7701w1h99cqsxsp892jkq"; depends=[geometry oro_dicom ptinpoly rgl]; }; @@ -4019,17 +4157,19 @@ in with self; { RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; Radviz = derive2 { name="Radviz"; version="0.9.2"; sha256="1k4bykrs6932n2iz2nngbs2k45ra7nq3rpxw4acpvxwxfciiq3ia"; depends=[dplyr ggplot2 hexbin igraph pracma Rcpp RcppArmadillo rlang]; }; RagGrid = derive2 { name="RagGrid"; version="0.2.0"; sha256="0crnpd75lyhd0awzqzqy7bzw4ydgxpyhy1ybb1ff4qsnisbjdbba"; depends=[crosstalk htmltools htmlwidgets knitr]; }; - Rage = derive2 { name="Rage"; version="1.0.0"; sha256="1x98y3mrncjq5c1xbfx2b0skng03c0hsgylsakm8qgviwmfa7v08"; depends=[DiagrammeR MASS popbio popdemo Rcompadre]; }; + Rage = derive2 { name="Rage"; version="1.1.0"; sha256="0s1v15l56ysdgg7qc13r0djlydzv1l8940csdsn28f4d2zi8xkxq"; depends=[DiagrammeR MASS popbio popdemo Rcompadre]; }; RainfallErosivityFactor = derive2 { name="RainfallErosivityFactor"; version="0.1.0"; sha256="16yrr2bl62m1nr81nzvmdq7s78f7fg50dah5dg5q4j4j7z8qfsqz"; depends=[]; }; + RamanMP = derive2 { name="RamanMP"; version="1.0"; sha256="0rdj8vvs9l86yscx2mvy6nazzws8gd1x5bxvszlssinb20pns69z"; depends=[dplyr ggplot2 ggrepel imputeTS]; }; Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; Rambo = derive2 { name="Rambo"; version="1.1.1"; sha256="036rvjj6gcnf2gg5xl55n5p8j1pzifb9wmlpwnymz1csxgkl477i"; depends=[sna]; }; RandMeta = derive2 { name="RandMeta"; version="0.1.0"; sha256="0bh3rkdfmwqym47q8f90pw3mmx7q8jyp4rz16ggqrmk1b5bdyqjb"; depends=[]; }; RandPro = derive2 { name="RandPro"; version="0.2.2"; sha256="092mm9gybvcby2n161nldlq8s2ja2bc43jnkln6ss3lr29rmi9b3"; depends=[caret e1071]; }; RandVar = derive2 { name="RandVar"; version="1.2.1"; sha256="17c6bx644n604zpggmwx1z3krgd9v7c88il45cf5yhp7zf7cc718"; depends=[distr distrEx startupmsg]; }; RandomCoefficients = derive2 { name="RandomCoefficients"; version="0.0.2"; sha256="04l0aczrlbkjk0687w2gxs85ia71yy69mgankwkl37ksznh6y81m"; depends=[fourierin ks orthopolynom polynom RCEIM rdetools robustbase sfsmisc snowfall statmod tmvtnorm VGAM]; }; - RandomFields = derive2 { name="RandomFields"; version="3.3.8"; sha256="1l4r67vmdisdawlhv6l4lqsn5i8wg2p1hs7v5553b3j2mvyy424a"; depends=[RandomFieldsUtils sp]; }; - RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.5.3"; sha256="0783z23rm5kv0x7796ggx6g07wpf18n7fjzv9r9ryji55sx3r0pa"; depends=[]; }; - RandomForestsGLS = derive2 { name="RandomForestsGLS"; version="0.1.2"; sha256="1wq926byha1365hj8v1q3ady921pwar6lkb1wx2mhazmdn7aqy10"; depends=[BRISC matrixStats pbapply randomForest]; }; + RandomFields = derive2 { name="RandomFields"; version="3.3.10"; sha256="0jcjb5j70s3xk8nb8hc1jkzg24d41y7h5yhch79g31ch4rvfcbgp"; depends=[RandomFieldsUtils sp]; }; + RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.5.4"; sha256="1hv66b10mzq50jyjr0w42jwy51wa9r7201y7f8m12jyfn6h8gmpm"; depends=[]; }; + RandomForestsGLS = derive2 { name="RandomForestsGLS"; version="0.1.3"; sha256="1xqzpfgs6hdkaf99xgrxc4m5k73vpvkhpgb4bw01rhhay08zzv4g"; depends=[BRISC matrixStats pbapply randomForest]; }; + Randomuseragent = derive2 { name="Randomuseragent"; version="0.0.1"; sha256="1ym272z5a2wnprz59db8knszzqglmrdmk77r7cfyzy5jwcqzy4jn"; depends=[]; }; RanglaPunjab = derive2 { name="RanglaPunjab"; version="2.3.4"; sha256="01j3gww9kil02d44jwlkz6j7lwn2him830bnshkly0s7mgh22pgr"; depends=[jpeg shiny tidyverse]; }; RankAggreg = derive2 { name="RankAggreg"; version="0.6.6"; sha256="1g70njfv776qgp3i52kr6yxg7x9qliqaj33jm5vkgbajw1ampsdx"; depends=[gtools]; }; RankAggregator = derive2 { name="RankAggregator"; version="0.0.1"; sha256="0j4s4fv28fbc6ij6fzpmza9n5lfrql8ll33fi65vhczz9pjhpjii"; depends=[]; }; @@ -4037,7 +4177,7 @@ in with self; { Rankcluster = derive2 { name="Rankcluster"; version="0.94.5"; sha256="1ddfcmiqy20s7sfjbxax0rvc9vb1ckr46icy1zsa103hhbp5pjqb"; depends=[Rcpp RcppEigen]; }; RankingProject = derive2 { name="RankingProject"; version="0.3.1"; sha256="11n5v8hnpldwkb5fz3y0nfjcrshns49yrrdf9205y7g80r34wmg7"; depends=[]; }; RapidPolygonLookup = derive2 { name="RapidPolygonLookup"; version="0.1.1"; sha256="0h4snn3haa4a5rkafg98419by4nnz219wsm3y0dqgm4hw4bvha0g"; depends=[PBSmapping RANN RgoogleMaps sp]; }; - RapidoPGS = derive2 { name="RapidoPGS"; version="1.0.2"; sha256="1lqvf563zzy5i0sljw7jqwilsj78yqnq821ghm0aqs9ixn5f9gn2"; depends=[bigsnpr curl data_table GenomicRanges IRanges RCurl]; }; + RapidoPGS = derive2 { name="RapidoPGS"; version="2.1.0"; sha256="038x4q6h0pf062nhjivfbb74f43li35pgjl8w8rzwr5pcsbjsif8"; depends=[bigreadr bigsnpr coloc curl data_table dplyr GenomicRanges IRanges RCurl]; }; Raquifer = derive2 { name="Raquifer"; version="0.1.0"; sha256="148inkn6yiyvicw0b4kw99n172xsvhrrdx1khghqs966smjw54wy"; depends=[dplyr gsl magrittr pracma Rdpack]; }; Rarefy = derive2 { name="Rarefy"; version="1.1"; sha256="1flpi5amv2q2kl75gab4bwv1b7nmsnr6lyanwwiky6zq0xridkw5"; depends=[ade4 adiv ape dplyr geiger vegan]; }; Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; @@ -4045,23 +4185,25 @@ in with self; { Rata = derive2 { name="Rata"; version="0.0.2"; sha256="1s7am08691lil5hbd8jpa5wnbvr0qqf0gkxczpm6yvizbjpx16qx"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2 Rirt]; }; RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.4"; sha256="1d37l4xgg1iba2rbhp4c5i7igrcy0zgbdvzk3yc0wj2x1mm5dayk"; depends=[ggplot2 pROC]; }; RationalExp = derive2 { name="RationalExp"; version="0.2.2"; sha256="0a51sfps3sfb71m93jdsmbvj6kafbyfrq790ix238j570f5xafpg"; depends=[snowfall]; }; - Ravages = derive2 { name="Ravages"; version="0.1.3"; sha256="0vqx1qz2km8frigxbpvn16sq3nlaizz558c2661jdpwrd95hr4dg"; depends=[BH dfidx Formula gaston mlogit Rcpp RcppEigen RcppParallel]; }; - RavenR = derive2 { name="RavenR"; version="2.0.1"; sha256="0kp5gfs4jfsl05cly79j5gpqbjdik6d3idknlyn86cd837mzc2dc"; depends=[colorspace cowplot deldir dplyr dygraphs gdata ggplot2 igraph lubridate magrittr ncdf4 purrr reshape2 rgdal rgeos scales sf sp xts zoo]; }; + Ravages = derive2 { name="Ravages"; version="0.1.5"; sha256="06djx15h3fp96sxlx7ig9ygc5mdb3fy12x4pdf2hvalqb61ki72n"; depends=[BH dfidx Formula gaston mlogit Rcpp RcppEigen RcppParallel]; }; + RavenR = derive2 { name="RavenR"; version="2.1.4"; sha256="09gz4n1rvzzrmc1wszkyxa1zs6mj6sg9b997yiszlk89nvcbyr2v"; depends=[colorspace cowplot DiagrammeR dplyr dygraphs gdata ggplot2 igraph lubridate magrittr purrr Rcpp RCurl scales stringr tidyr xts zoo]; }; + RawHummus = derive2 { name="RawHummus"; version="0.1.8"; sha256="1zh2g5463x1lk86z7g9aa7d626ndm1a32206ca6w9ylrihp7n8dy"; depends=[data_table dplyr kableExtra plotly purrr RaMS RColorBrewer rmarkdown shiny shinycustomloader shinydashboard shinydashboardPlus shinyFiles shinyMatrix shinyvalidate]; }; Rbeast = derive2 { name="Rbeast"; version="0.2.2"; sha256="12i6jm7x1hwkj6skva9sli02rm4krzb2gmzny68d9cjhdcan5baq"; depends=[]; }; Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; - RblDataLicense = derive2 { name="RblDataLicense"; version="0.2.3"; sha256="1bkb4q2drz12j2saqq9basm8mw4wx5my28nnyiijrgmwmsd6hp9k"; depends=[RCurl xts]; }; + RblDataLicense = derive2 { name="RblDataLicense"; version="0.2.4"; sha256="0if4xwjkh4hw8mhfyw6sz0lpb3wcaz7kcx00axi035yf63bmplzg"; depends=[RCurl xts]; }; Rblpapi = derive2 { name="Rblpapi"; version="0.3.11"; sha256="0vfvp0v3nr90l39y93z86fqm93fbkasc5rd61k912qfbw73l8h7w"; depends=[BH Rcpp]; }; Rborist = derive2 { name="Rborist"; version="0.2-3"; sha256="0qf4m6ibr4mlrmsybb5b8f1hkmp9n6ksjsxc4msd3q4rr99zkczk"; depends=[data_table digest Rcpp]; }; Rcan = derive2 { name="Rcan"; version="1.3.82"; sha256="0asmlhh786c9gfgxkqybv8xzz8bqzirxvq8nr4gglx1pc812idkb"; depends=[data_table ggplot2 scales]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-3"; sha256="1rk1zgab6zi7hcmyqlb18kycv3cd15c7lwhw5kig96f2n3xymzig"; depends=[]; }; + Rcatch22 = derive2 { name="Rcatch22"; version="0.1.12"; sha256="0b4iffay1v4g48gk9m3yfisl0km60af18j0cawqs96dq3q3c4q99"; depends=[Rcpp]; }; RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; }; Rcereal = derive2 { name="Rcereal"; version="1.2.1.1"; sha256="16gak1kgsnla89b6nbhfb5w9xfjhdpxza8sfc2isbhfggvl1h79j"; depends=[]; }; RcextTools = derive2 { name="RcextTools"; version="0.1.1"; sha256="1rrij4ryspff9mn1c3jlzjprnipak7nzlb488pk0ci0awaccp5ga"; depends=[data_table igraph sqldf visNetwork]; }; Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; RchivalTag = derive2 { name="RchivalTag"; version="0.1.2"; sha256="0285n5mxs643546qhyqkccaq1fkn1hxagrhj2abahskfl53i9rsw"; depends=[dygraphs mapdata maps maptools ncdf4 oceanmap PBSmapping plyr pracma raster readr rgeos sp xts]; }; - Rchoice = derive2 { name="Rchoice"; version="0.3-2"; sha256="0ldz39cx4blzikwr454f9w263hm8mscxv3rirryzs9xc8sb7j6df"; depends=[Formula maxLik msm plm plotrix]; }; + Rchoice = derive2 { name="Rchoice"; version="0.3-3"; sha256="09fssba9wi290i9nd0vxbhz29bgm7rj4aanvxkma2pdk6impcvfq"; depends=[Formula maxLik memisc miscTools msm numDeriv plm plotrix sandwich]; }; RclusTool = derive2 { name="RclusTool"; version="0.91.3"; sha256="0f6v2p6dg3fq3vzys6hgwmmgyrxfj2kb4wpbywd7f9p5yd9cfd88"; depends=[class cluster conclust corrplot e1071 factoextra FactoMineR ggplot2 jpeg MASS mclust mda mmand nnet png randomForest reshape sp stringi stringr tcltk2 tkrplot]; }; Rcmdr = derive2 { name="Rcmdr"; version="2.7-1"; sha256="1rqj5xdafiqks42ai5rdmvk6szjn1b8yrpssx969d6pdv2pxv96j"; depends=[abind car effects lme4 RcmdrMisc relimp tcltk2]; }; RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.7-1"; sha256="1djm21mfk1l8zmaz6p51li0swpvzs05z9p11ad83d5rbbkdpwl7w"; depends=[abind car colorspace e1071 foreign haven Hmisc lattice MASS nortest readstata13 readxl sandwich]; }; @@ -4098,7 +4240,7 @@ in with self; { RcmdrPlugin_coin = derive2 { name="RcmdrPlugin.coin"; version="1.0-22"; sha256="0qmdjnjmgq52wgl4llg69q9x7hvwd73mz3swv0sv88v8zqg7xj93"; depends=[coin multcomp Rcmdr survival]; }; RcmdrPlugin_depthTools = derive2 { name="RcmdrPlugin.depthTools"; version="1.4"; sha256="16y60yymx97nh587939lahsh0mk53yy25zy6i90l9vad0r7ih23v"; depends=[depthTools Rcmdr]; }; RcmdrPlugin_lfstat = derive2 { name="RcmdrPlugin.lfstat"; version="0.8.3"; sha256="1rcr43dqyb9zw9av3awkz0640vmvhxrafal5brnhqnpg4hfbpma3"; depends=[lfstat Rcmdr]; }; - RcmdrPlugin_orloca = derive2 { name="RcmdrPlugin.orloca"; version="4.7"; sha256="01yd1a7l9r8mb3gqhx7rq9cr3clpjfzzsq7pply6xhv9g77gs88z"; depends=[orloca orloca_es Rcmdr]; }; + RcmdrPlugin_orloca = derive2 { name="RcmdrPlugin.orloca"; version="4.8.2"; sha256="0nkszrbcprd08p0i9r6k2syg44kyqpdakmwmjf480pwydq3sz69n"; depends=[orloca orloca_es Rcmdr]; }; RcmdrPlugin_plotByGroup = derive2 { name="RcmdrPlugin.plotByGroup"; version="0.1-0"; sha256="10wc7lnihsrldsynq2s0syr1aqmvfnj9rhgwh1nkk7jlrwcgj0z6"; depends=[lattice Rcmdr]; }; RcmdrPlugin_pointG = derive2 { name="RcmdrPlugin.pointG"; version="0.6.6"; sha256="0sc3akbpdys353va05b40g3rq8qihw0pmhvv0kckkhsgrbr8mc07"; depends=[Rcmdr RColorBrewer]; }; RcmdrPlugin_sampling = derive2 { name="RcmdrPlugin.sampling"; version="1.1"; sha256="0fx0s63wq0si1jydl9xyj9ny7iglg91zpvkyrnc05i5pan9l3xd9"; depends=[lpSolve MASS Rcmdr sampling]; }; @@ -4110,36 +4252,39 @@ in with self; { Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcompadre = derive2 { name="Rcompadre"; version="1.0.0"; sha256="106kwhycd4g7rnip0fiw4f9d3qfssqwrqk5mhabwjdgvki33dryi"; depends=[popdemo tibble]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="1.0.6"; sha256="04ph6lm36cmvz01ng53pvvf3jxvzsn9smyflkfc7l3q0pib4gwn9"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="1.0.7"; sha256="07fwlgmx0ib4nziqbrylla2dlakw04vzny9w4qbfvnhn49rs9r8m"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0.1"; sha256="0vw41plcl7hbi0af3la0sb4x8zqnhxjpjslx8r8cllfamy9dixki"; depends=[]; }; RcppAPT = derive2 { name="RcppAPT"; version="0.0.7"; sha256="00p4nciy6rv9plzk13sxfvdsr6m9ackjmg647pha9s8nbhlbdjf4"; depends=[Rcpp]; }; - RcppAlgos = derive2 { name="RcppAlgos"; version="2.4.1"; sha256="0s97v2agy8pzaqfjm7cabpfxpkidxl1zwi4vkjdhsfzxjp5xwwms"; depends=[gmp Rcpp RcppThread]; }; - RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.18"; sha256="0n68cf77gz34iq6w6ad87pbqwqam45nxp1gjzns4g6qhf7qdvrz4"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.10.4.0.0"; sha256="00nc7wfrra645mp7dl4j451m3pk3a0b3lrhgf8ydnw862avr9s6v"; depends=[Rcpp]; }; - RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; + RcppAlgos = derive2 { name="RcppAlgos"; version="2.4.3"; sha256="1vclvkd9gikx9n7cvgbf8j9sahmy0wfrgzb1hcpsdj8l6ymjc91k"; depends=[gmp Rcpp RcppThread]; }; + RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.19"; sha256="12k8ny981dmky5js8yl6bih5r5mq3w43f2f9admhkwqn0n80kcl9"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.10.6.0.0"; sha256="1bcx8fk5l5mmwb6cw36ndvld9v3amkz6vyc19059dw0xp7mxx04v"; depends=[Rcpp]; }; + RcppBDT = derive2 { name="RcppBDT"; version="0.2.4"; sha256="11xq2lz4n4gyqk4pz8c3zr5ll8jlh1qlbf9rbqd3q6s3qzphpybd"; depends=[BH Rcpp]; }; RcppBigIntAlgos = derive2 { name="RcppBigIntAlgos"; version="1.0.1"; sha256="157a14kqcf0q3z01mn4w1194k2l39dd4qmqs0i115p8bvkjc6ncd"; depends=[gmp Rcpp RcppThread]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.9"; sha256="1bnagfhx70xmzjddbaf1cpz4hmx3mhym4fg36hr9025yl7n4agvj"; depends=[Rcpp]; }; RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; - RcppCWB = derive2 { name="RcppCWB"; version="0.3.2"; sha256="1ipbr729n4q0y5rdnrmj354w2wmrw2zz7zyfqnjvxh8ip507dham"; depends=[Rcpp]; }; + RcppCWB = derive2 { name="RcppCWB"; version="0.4.3"; sha256="0rixmnr94pcmby08d8k60l2pc7almpmx6xf59mxwjnhr0da8lrs9"; depends=[Rcpp]; }; + RcppCensSpatial = derive2 { name="RcppCensSpatial"; version="0.1.0"; sha256="0ckyl88b81l58dkk0s40mcanjqaibi106q6jsrak79as93g1dbh1"; depends=[ggplot2 gridExtra MomTrunc mvtnorm Rcpp RcppArmadillo RcppProgress Rdpack roptim tlrmvnmvt]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.12"; sha256="0v9v34i1c4dkplavdl14kz1k2rnk4hsaiyv6rkc9403z9isvzzr0"; depends=[Rcpp]; }; RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.2"; sha256="0dr2104miy7psr73nicfs84652ai0d5liw6wxcwyrx7fmys3p638"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.6"; sha256="1i9jj595nqpb16y22z2b8fcf0gq1fg0pbiisbd837p1cyw4nff69"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; - RcppDate = derive2 { name="RcppDate"; version="0.0.2"; sha256="1c44kd0cq4q33qj970by7zqk3y1gdffpgf7xjiq9c540ya8yd56l"; depends=[]; }; + RcppDate = derive2 { name="RcppDate"; version="0.0.3"; sha256="1nwb4fdjxwn0c1ckj1fpsxl2hxk5z3sk3y5giwgdag6nfv7yfplw"; depends=[]; }; RcppDist = derive2 { name="RcppDist"; version="0.1.1"; sha256="02g57xwfipdcljv06krhm02dbqn9kfyj2km6rdg0a7vq9prwdz1x"; depends=[Rcpp RcppArmadillo]; }; RcppDynProg = derive2 { name="RcppDynProg"; version="0.2.0"; sha256="10nc0sx3n83kg8rddbajifr9q8iyjmm59z5xcpqfmmfi345i26al"; depends=[Rcpp RcppArmadillo wrapr]; }; RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.9.1"; sha256="0qp9gypar280lm84pc8w0fxw4jgwqygwi3qnl5sl52kpkcj8c14a"; depends=[Matrix Rcpp]; }; RcppEigenAD = derive2 { name="RcppEigenAD"; version="1.0.0"; sha256="18zm9hsfqwiicxsdm87ix3qc261ljxxn2s736p6aayx82b6vwkz6"; depends=[BH functional memoise Rcpp RcppEigen Rdpack readr]; }; - RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.16.1.1"; sha256="14vi0wz9xr2swwh0ikvi1c2jbmj3ng7bgsycx6z9ym4dsnnrar7r"; depends=[Rcpp RcppArmadillo]; }; + RcppEnsmallen = derive2 { name="RcppEnsmallen"; version="0.2.17.0.1"; sha256="1zxvzka4jbn64cgafd77s6wx6zhv3ngmzqws2d74hmf7akcyys19"; depends=[Rcpp RcppArmadillo]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.9"; sha256="0568zipgjxgmx086mlfpp5n7v8kf50gwrylvhl1bgvzb2vvr9dhj"; depends=[Rcpp]; }; RcppFaddeeva = derive2 { name="RcppFaddeeva"; version="0.1.0"; sha256="1rah18sdfmbcxy83i7vc9scrwyr34kn9xljkv9pa31js68gn2jrl"; depends=[knitr Rcpp]; }; - RcppFastFloat = derive2 { name="RcppFastFloat"; version="0.0.2"; sha256="1pzs6bzdnlvd3jr2p385jkppnhl82q56c4bp0m35qbpimw2ym2k1"; depends=[Rcpp]; }; - RcppGSL = derive2 { name="RcppGSL"; version="0.3.8"; sha256="17nlayy6gvwb3v6l5aiqm84i75yf4dfi3zclxrgpqwf3j9v09yvz"; depends=[Rcpp]; }; + RcppFarmHash = derive2 { name="RcppFarmHash"; version="0.0.2"; sha256="0nkismq7hmp1ahwv4z438zrcj7mqsfmas2yd6av6k2cmkgklqkbk"; depends=[Rcpp]; }; + RcppFastFloat = derive2 { name="RcppFastFloat"; version="0.0.3"; sha256="1926hz4q6qqvz8zpabgvk04a18cm1xaqcf30yjgcrslgaf8l8h0n"; depends=[Rcpp]; }; + RcppGSL = derive2 { name="RcppGSL"; version="0.3.9"; sha256="0zhfkn3w5q2k2ggizrikz9an8hm90g6mr60paq0z8xgp5hpkrlk6"; depends=[Rcpp]; }; RcppGetconf = derive2 { name="RcppGetconf"; version="0.0.3"; sha256="1qcnn482h9b8aw798frnkza4bzzpihp0pf4s1mj6zmn2ar01hsl0"; depends=[Rcpp]; }; RcppGreedySetCover = derive2 { name="RcppGreedySetCover"; version="0.1.0"; sha256="1v84i9gsmvpkmgd4niqnzp58nhrgn2j4rggsrnlh391ikdfrl51x"; depends=[BH data_table Rcpp]; }; RcppHMM = derive2 { name="RcppHMM"; version="1.2.2"; sha256="0scdzmns1yw2gbarblzd6cbvndlysz54ff17qijiz17ql5cyzly6"; depends=[Rcpp RcppArmadillo]; }; RcppHNSW = derive2 { name="RcppHNSW"; version="0.3.0"; sha256="01z0plf1i6dyibw4ica8shmijyk1grpqb886hcga72z2cpm4xsx0"; depends=[Rcpp]; }; RcppHungarian = derive2 { name="RcppHungarian"; version="0.1"; sha256="1yx7kjjampjk47l8cqpv727g0nv23dnld9n8iwf7h1myfrl3yb6h"; depends=[Rcpp]; }; + RcppML = derive2 { name="RcppML"; version="0.3.7"; sha256="1ih8i7i6m221iw227mnl3rvnaw2l53h8fpnc4f8yn9sm10anap1j"; depends=[Matrix Rcpp RcppEigen]; }; RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-7"; sha256="07vh1wyp2rxhfrb4vi5njchrby99bynd88na8qjxcnbypkgsrhbl"; depends=[BH Rcpp RcppArmadillo]; }; RcppMeCab = derive2 { name="RcppMeCab"; version="0.0.1.2"; sha256="0varavfbrqzma176rw0dr9v5chh7pxh5y9g0rs3v7hqnlghp22y2"; depends=[BH Rcpp RcppParallel]; }; RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.3"; sha256="0ffdw5ckkax8j87q0ykjhyp45l7gvxjppdi73kc4r5qxvijll2g3"; depends=[BH Rcpp]; }; @@ -4148,11 +4293,11 @@ in with self; { RcppParallel = derive2 { name="RcppParallel"; version="5.1.4"; sha256="10pa9vaz7p4m6hjca2cpy6vj7rvgly4zv0q1g2xfsmcchyk4bdbn"; depends=[]; }; RcppProgress = derive2 { name="RcppProgress"; version="0.4.2"; sha256="0j2b37gwjpgmrnr00srdzm751hzlpsjb54ph63xxmcdfnwhlnqmi"; depends=[]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.3"; sha256="0cj95y8jcjm33d65y42f5ijw775kq3mh2p0659mp3i3r9fvaishk"; depends=[BH Rcpp]; }; - RcppRedis = derive2 { name="RcppRedis"; version="0.1.10"; sha256="07cxp0xdrg1bydlvgryf8jivlqicd880xdfdz6grhqqdxwss8qv1"; depends=[BH RApiSerialize Rcpp]; }; + RcppRedis = derive2 { name="RcppRedis"; version="0.1.11"; sha256="0aill5ng6ifcafsij1nsqcchca8sxdd87645c45sx7dznpsgrhvj"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.3.0"; sha256="0srzfhzkk42kzrdjnhbb37946jp1p688rgysy6k3i2is8jb21zyb"; depends=[Rcpp]; }; - RcppSMC = derive2 { name="RcppSMC"; version="0.2.3"; sha256="1m6djcs20wn61vdc89s8bc0w5cq5q3cqc7kv1kzzy3qzwqdyg7w5"; depends=[Rcpp RcppArmadillo]; }; - RcppSimdJson = derive2 { name="RcppSimdJson"; version="0.1.5"; sha256="1r9dc6g1wa8mh170jx3aw9ak7gghkkmpy16i83aysflvf5ydrslp"; depends=[Rcpp]; }; - RcppSpdlog = derive2 { name="RcppSpdlog"; version="0.0.5"; sha256="05vmhnpl19fpnghmi871zd780c40j0cdns82i4613xhbilg8l81q"; depends=[Rcpp]; }; + RcppSMC = derive2 { name="RcppSMC"; version="0.2.5"; sha256="1jhxyvbgny52kvck276i07g1zz3lzzjw1w2q4xlb50xqwlbks4r0"; depends=[Rcpp RcppArmadillo]; }; + RcppSimdJson = derive2 { name="RcppSimdJson"; version="0.1.6"; sha256="06d2w7a57sidw06ymk3kb0bc1xp0fzzz39m7niwpz0f10203ky0z"; depends=[Rcpp]; }; + RcppSpdlog = derive2 { name="RcppSpdlog"; version="0.0.6"; sha256="1s9bws7rzj2h42b4zflll6vcmbxcnxx526p8zzwc0wcxsy3ig9yk"; depends=[Rcpp]; }; RcppStreams = derive2 { name="RcppStreams"; version="0.1.3"; sha256="06il7q3afaws57m0fxf04f2p5dvs23l1f7gl78pxwzclacdy3839"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.7"; sha256="0h8517ipwqhqkhcfiyqmvsb585g01p0ra0azbpzyxip6pq6g029g"; depends=[Rcpp]; }; @@ -4170,10 +4315,11 @@ in with self; { Rd2md = derive2 { name="Rd2md"; version="0.0.5"; sha256="1kqni87jg3avpcir1ls2kkf6qafkkdkcv51d9azsbqmji5168vlf"; depends=[knitr]; }; Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.11"; sha256="1sqzhfffap8i9nwclsj0q77sn6i0gzkn2hqfvw6k2w7j6aypyv4i"; depends=[formatR roxygen2 xfun]; }; Rdca = derive2 { name="Rdca"; version="0.1.0"; sha256="06s4n5xpla937q9f55xmsickvdiwiapxmwqvn6k0zsacisscaagl"; depends=[dplyr magrittr minpack_lm Rcpp RcppArmadillo Rdpack]; }; + Rdiagnosislist = derive2 { name="Rdiagnosislist"; version="0.2"; sha256="0x08c5093kqjaw5hw7y2xhyshp25rlfmh3q7508cj1xk41msygx8"; depends=[bit64 data_table]; }; Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; - Rdimtools = derive2 { name="Rdimtools"; version="1.0.6"; sha256="0icjpb5jyw1vrar2qcfmxg16v8nj5ghy6di69hdwv42h03xjzjsq"; depends=[CVXR maotai MASS mclustcomp RANN Rcpp RcppArmadillo RcppDE RcppDist Rcsdp Rdpack RSpectra]; }; + Rdimtools = derive2 { name="Rdimtools"; version="1.0.8"; sha256="0hzr8yiiwjik0ppr7lak864nngr9i68ib01x9v4g86ixmgakha0w"; depends=[CVXR maotai MASS mclustcomp RANN Rcpp RcppArmadillo RcppDE RcppDist Rcsdp Rdpack RSpectra]; }; Rdistance = derive2 { name="Rdistance"; version="2.1.3"; sha256="03wh6y9h5jgfc6xdncpgyz0v7lqavikp3pf5wwfmm2rqfj7yjr8c"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="2.1.1"; sha256="11psw5yiamq0g7jc6fqn2wis565i60qgda4a5d09qi8fyzd6mnfb"; depends=[rbibutils]; }; + Rdpack = derive2 { name="Rdpack"; version="2.1.2"; sha256="0s51c5fw1ka75b8cxk5bh27h6wcy5169yl93sjlxji2k27n9fj3i"; depends=[rbibutils]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdrw = derive2 { name="Rdrw"; version="1.0.2"; sha256="1487r8z6h1y0v6fxkp7qfbh7j96hw8gqbb0fc90m4cxwz0hrqrn2"; depends=[mvtnorm]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.5"; sha256="04268fbajm7pgi5mxpghzw0yjwwx1dy9vdi6yhr20q2lmi6xh19w"; depends=[]; }; @@ -4192,36 +4338,36 @@ in with self; { Recocrop = derive2 { name="Recocrop"; version="0.3-2"; sha256="1kcw0qkxwa58yk6iclbg5c0m3q2ylqwra24y9vxjpr2ajmsr5lf8"; depends=[meteor Rcpp terra]; }; Recon = derive2 { name="Recon"; version="0.3.0.0"; sha256="11gag2bl00pcy7ysfycaa58qarh6aigznldkc4kkn2178bl4ii62"; depends=[rootSolve]; }; RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-12.1"; sha256="0l837hmcn1gwisn1y9q745grg1fyrdbx44jhj81475h2zdn8dbs4"; depends=[ada data_table DBI e1071 evd ff ipred nnet rpart RSQLite xtable]; }; - RecordTest = derive2 { name="RecordTest"; version="2.0.0"; sha256="1lq81zp94gkf45hp6idfcy6skc78mwqhaac6d013wnnv3fasf5bh"; depends=[ggplot2]; }; + RecordTest = derive2 { name="RecordTest"; version="2.1.0"; sha256="0a5hbhqx97kllwf5k6lrhcqixhqqj8ndklcvpmsp9jdf011b1100"; depends=[ggplot2]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; - RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.1.5"; sha256="1b6pp1vdn7jnyl8k828dgkxrx8sy2wyhkrn4rnfavqw4qvhm0mhm"; depends=[dplyr igraph magrittr RJSONIO rlang visNetwork]; }; - Rediscover = derive2 { name="Rediscover"; version="0.1.0"; sha256="16yjpgva314xdypg6bh4a8qwm7n2xf29jziqcmhg8dn9xhha3nh6"; depends=[data_table maftools Matrix PoissonBinomial RColorBrewer speedglm]; }; + RedditExtractoR = derive2 { name="RedditExtractoR"; version="3.0.3"; sha256="0p6d40ba5a3ndh12lrxj2i23xlspw6nygmsh3zsnjmjw4bg3dir0"; depends=[RJSONIO rlang]; }; + RedisBaseContainer = derive2 { name="RedisBaseContainer"; version="1.0.1"; sha256="0pnjj3rbp2as7h92907g338bd173ygl1zfnlfw6c9wpzfvw909rr"; depends=[DockerParallel]; }; + Rediscover = derive2 { name="Rediscover"; version="0.2.0"; sha256="01h08060b833jxay94f5cpzy6f3rq3ppimrvmg9395z16jryb77j"; depends=[data_table maftools Matrix PoissonBinomial RColorBrewer speedglm]; }; Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; - RefFreeEWAS = derive2 { name="RefFreeEWAS"; version="2.2"; sha256="1aya34iz5v3xfpj86x9ab998m7fdwl138ly007mgdayacvqi4a6y"; depends=[quadprog]; }; RefManageR = derive2 { name="RefManageR"; version="1.3.0"; sha256="1spzdp5ni52dybcaxqnhwdphh27wjyrsfy4hsxsplpg9rqwfqfps"; depends=[httr jsonlite lubridate plyr stringr xml2]; }; RegClust = derive2 { name="RegClust"; version="1.0"; sha256="1d9w74phw4fgafglc18j7dpmln96fvxnf1kdc9zddgj90p8yfx63"; depends=[]; }; RegKink = derive2 { name="RegKink"; version="0.1.0"; sha256="1q7jpsh3al18i2dv67lmv5d6jgiy2px8jaxwkgg62njisk8c5qng"; depends=[MASS]; }; - RegSDC = derive2 { name="RegSDC"; version="0.5.0"; sha256="12x6bjzc8gd8sg7h1dymgm9iyaz33vf51fj23g59479yhczbnr26"; depends=[MASS Matrix SSBtools]; }; + RegSDC = derive2 { name="RegSDC"; version="0.6.0"; sha256="1vlxvdqnab0paawfxikl8gkq5pvv62xb1l6rvlzchj988vnaw9df"; depends=[MASS Matrix SSBtools]; }; RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.4"; sha256="0mhyjqp8x66zwnbxpwq3a8180z48rrm7hp50028grb2x19lp8qkd"; depends=[]; }; RegularizedSCA = derive2 { name="RegularizedSCA"; version="0.5.4"; sha256="1nw6hd9y2n1h3j1fqqkymz13xizv5xrsj93w702kkvkbwyl3yall"; depends=[colorspace ggplot2 gtools lattice mice psych RGCCA]; }; ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.5"; sha256="0zk1hy4p5adyjm1430a8ad5acn9qaax1si8qqfxqayfmlj954sj9"; depends=[data_table ggplot2 hash]; }; RelValAnalysis = derive2 { name="RelValAnalysis"; version="1.0"; sha256="1jl1gfj44gfkmc1yp6g5wwn4miydwpvxwrg76rnkv9454zrc5pvp"; depends=[zoo]; }; Relatedness = derive2 { name="Relatedness"; version="2.0"; sha256="1aidklwk8q2wdfsmhlbd3vzq9kzsyh4wn1g28biyb6lq7iwq1hl4"; depends=[]; }; Relectoral = derive2 { name="Relectoral"; version="0.1.0"; sha256="0kpdafdvpcs6iicpc10i634nlk7dqk2nymdnnlkpp5frdxlbycvx"; depends=[dplyr ggforce ggplot2 readxl rmarkdown sf xlsx]; }; - Relexon = derive2 { name="Relexon"; version="0.2.1"; sha256="1shq1v3y1jhrnkl3fdnrwv23zrh8dx0k7zwqcvn5dxpd3vzsxqxg"; depends=[readr]; }; Reliability = derive2 { name="Reliability"; version="0.0-2"; sha256="12zsicgbjqih3grbs62pw37x8wlkmnyc7g0yz6bqnfb4ym2yb7fg"; depends=[]; }; RelimpPCR = derive2 { name="RelimpPCR"; version="0.2.4"; sha256="0svfyh313wawzqx9hfb4cg0wn2ir6nd769z1k3dckdsb8d7xkh3q"; depends=[caret ggplot2 relaimpo reshape2 Rmisc]; }; Renext = derive2 { name="Renext"; version="3.1-0"; sha256="074djs4y71667aylpgh514pzijr90rgpzm4w5ayq9cgaqz22m3am"; depends=[evd numDeriv]; }; - RenvModule = derive2 { name="RenvModule"; version="1.0"; sha256="0rlgprzy5a08km98yqxjw8lkiyfikryrrmdh6r8bfhx3g2721syc"; depends=[]; }; - Renvlp = derive2 { name="Renvlp"; version="2.9"; sha256="0nra1hiwdwdfymmyhlq856p0ijlxakf4l2c5kah76gdyifv1vyvz"; depends=[Rsolnp]; }; + RenvModule = derive2 { name="RenvModule"; version="1.1"; sha256="1wmz6k0f9lpa8d7qxqm308l7h11k0cj07q3qisfjic5sp308c3d2"; depends=[]; }; + Renvlp = derive2 { name="Renvlp"; version="3.0"; sha256="0mnyckmzlkp6ypqjlw94wjq0c46gxi3vn1a08a9m0irm9wd2xa3z"; depends=[Rsolnp]; }; ReorderCluster = derive2 { name="ReorderCluster"; version="1.0"; sha256="0ss750frzvj0bm1w7zblmcsjpszhnbffwlkaw31sm003lbx9hy58"; depends=[gplots Rcpp]; }; RepaymentPlan = derive2 { name="RepaymentPlan"; version="0.1.0"; sha256="1fd4n24bd5s2kqmls7mmsidblaf8nzm97kz52mfsb6i6fci0pgah"; depends=[]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; Replicate = derive2 { name="Replicate"; version="1.2.0"; sha256="0kqy248c8n7qr5hwzvqm7flnjlwd60c577r1d4vzgfxn7azd5v3v"; depends=[ggplot2 metafor]; }; Replication = derive2 { name="Replication"; version="0.1.2"; sha256="1za7zcdaf839xf8hxy4rcrr1p80n6a3ywb2bsl3wikwa0pxdvvbh"; depends=[blavaan lavaan MASS mice quadprog rjags runjags]; }; + ReplicationSuccess = derive2 { name="ReplicationSuccess"; version="1.0.0"; sha256="14q5vwdmhb35867j1ms46v4dmp361g3m18bjwjv22n8bxw637aw6"; depends=[rootSolve]; }; Repliscope = derive2 { name="Repliscope"; version="1.1.0"; sha256="0hij4ng77bkd979ndbhx1nqq2rfb69q23ghyd7illgvgrc79y9mr"; depends=[colourpicker ggplot2 shiny]; }; RepoGenerator = derive2 { name="RepoGenerator"; version="0.0.1"; sha256="0d6s2sqyycaqrg32xdkp3pr5i7qmvwrfrjcd7f94a9y3lz4bz5b5"; depends=[git2r httr rmarkdown rstudioapi]; }; - Require = derive2 { name="Require"; version="0.0.10"; sha256="13bzas88862jbia0s2gdl6jssv9n9byc2hg2c9cj03b69nxw71r0"; depends=[data_table remotes]; }; + Require = derive2 { name="Require"; version="0.0.13"; sha256="09i5pq0qx1n10sbby0jqgs7arw46a31c4wn9mnz71gjad5kv375d"; depends=[data_table remotes]; }; ResearchAssociate = derive2 { name="ResearchAssociate"; version="1.0.1"; sha256="00j339ngc72gn2gyn1irjmazrv6l5nbsy3z25r6j1zrjwsbay15p"; depends=[ggplot2 plyr rentrez XML]; }; ResidentialEnergyConsumption = derive2 { name="ResidentialEnergyConsumption"; version="1.1.0"; sha256="0m24x5mha58ihsd06jkcb3wi796v3gkjg78w8vah21p9gqdmqxw1"; depends=[]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-32"; sha256="0zqnl0bbqrj5hn5ywhlqyrlz5ryql88qahlgs9989v4rljcxxlam"; depends=[]; }; @@ -4229,15 +4375,18 @@ in with self; { RespirAnalyzer = derive2 { name="RespirAnalyzer"; version="1.0.1"; sha256="0zdgbim5496fpfxi4cgn4fbl70grclii2naizaiabm4cz350hf6y"; depends=[pracma Rcpp signal]; }; RestRserve = derive2 { name="RestRserve"; version="0.4.1"; sha256="1486hrzj5q5w4nbrsbqlv7vv20ly01y90qc2vygl5syzwvyjd422"; depends=[checkmate jsonlite mime R6 Rcpp Rserve uuid]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; - ReviewR = derive2 { name="ReviewR"; version="2.3.6"; sha256="177gxnxpnbpc7hmaxc5qq1s8k1s4l29bf0bsi6plafy622ls321w"; depends=[bigrquery config dashboardthemes DBI dbplyr dplyr DT gargle glue golem httr jsonlite magrittr pkgload purrr redcapAPI REDCapR rlang RPostgres RSQLite shiny shinycssloaders shinydashboard shinydashboardPlus shinyjs shinyWidgets snakecase stringr tibble tidyr]; }; + RevGadgets = derive2 { name="RevGadgets"; version="1.0.0"; sha256="0k17flvax4cq9cvl3fsyv5ya0bndikxbzdmk87v5xz3czf31kk81"; depends=[ape deeptime dplyr ggimage gginnards ggplot2 ggplotify ggpp ggthemes ggtree phytools png reshape tibble tidyr tidytree treeio]; }; + ReviewR = derive2 { name="ReviewR"; version="2.3.7"; sha256="133q3jiydf4n2frx4zmapbqgvz1f5bn1wkgsnfaaffxpz5962kxk"; depends=[bigrquery config dashboardthemes DBI dbplyr dplyr DT gargle glue golem httr jsonlite magrittr pkgload purrr redcapAPI REDCapR rlang RPostgres RSQLite shiny shinycssloaders shinydashboard shinydashboardPlus shinyjs shinyWidgets snakecase stringr tibble tidyr]; }; + Revticulate = derive2 { name="Revticulate"; version="0.3.0"; sha256="0f20kn5nwh7kzq4f91cfwpx0gmxxwyg9rfw4inswnnkcqr7gg6z2"; depends=[ape comprehenr knitr phytools stringi stringr]; }; Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; RfEmpImp = derive2 { name="RfEmpImp"; version="2.1.5"; sha256="1bvjk71rfhpbj2j7raibsb0y3skbv1qba7yl2g00npnkk2zk14xj"; depends=[mice ranger]; }; Rfacebook = derive2 { name="Rfacebook"; version="0.6.15"; sha256="0hp2mbm0hnyasizszvh5x9hv7z2q633zck1a1gvk36nbxb1shx7c"; depends=[httpuv httr rjson]; }; - Rfast = derive2 { name="Rfast"; version="2.0.1"; sha256="1cq3mcg49hsvqhwn6f4dgsx7f8ma4qnwr5n6s7m22qy57rg31958"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; + Rfast = derive2 { name="Rfast"; version="2.0.3"; sha256="1bmhmli6q4kg8321595k0yy91w9cblk14s6qbc9wf8f05108rg15"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; Rfast2 = derive2 { name="Rfast2"; version="0.0.9"; sha256="1mkncazxcd1rx1vkp6r4s2gbvhgmfbcz6paq2x2yrj7k1yvpx5cr"; depends=[RANN Rcpp RcppArmadillo Rfast]; }; Rfit = derive2 { name="Rfit"; version="0.24.2"; sha256="1b3pza2xdpifvrcqbdp5r2wy82ws1844bnpna01hqj65xbw2iix8"; depends=[]; }; + Rfmtool = derive2 { name="Rfmtool"; version="4.1.4"; sha256="0vli7n957vrxs47nq5h4aqd9nwq7alj47q91zqc009rfx7wgx2k5"; depends=[]; }; Rfolding = derive2 { name="Rfolding"; version="1.0"; sha256="15lf73zxr1slin9faj9k0z8qkb1g9nb7h080nfv99gsi2ks68ssg"; depends=[]; }; - Rforestry = derive2 { name="Rforestry"; version="0.9.0.4"; sha256="0jf84nxjsyblraiz2kz2ay2rs1q4hwyf00039i655smfmfk0nz07"; depends=[glmnet onehot Rcpp RcppArmadillo RcppThread visNetwork]; }; + Rforestry = derive2 { name="Rforestry"; version="0.9.0.57"; sha256="1sm45ivij3pdgr5n2mqz25613nq7865d0mk9c2k33sb3z1lbfi73"; depends=[dplyr glmnet onehot Rcpp RcppArmadillo RcppThread visNetwork]; }; Rfractran = derive2 { name="Rfractran"; version="1.0"; sha256="0cwc069f7rhkxkr5kn0n43mdy8m47gh0q6d5ijwzkhncrijb10cy"; depends=[gmp]; }; Rfssa = derive2 { name="Rfssa"; version="1.0.0"; sha256="0rmlx1fia0758kbqpi56awh7xws5pwx6zl8nnggi6bqalyskf09n"; depends=[dplyr fda lattice markdown plotly Rcpp RcppArmadillo Rssa shiny]; }; Rga4gh = derive2 { name="Rga4gh"; version="0.1.1"; sha256="0h5y722blkkwn6ask6vjnhl22v9l6511chdm50ig6xcs5dvjam2m"; depends=[httr jsonlite]; }; @@ -4245,37 +4394,35 @@ in with self; { Rgbp = derive2 { name="Rgbp"; version="1.1.4"; sha256="1y51sms321sbrl3rgzp5hq4y5mqkrjxsyrq75gkcbwfvlakjcfrg"; depends=[mnormt sn]; }; Rglpk = derive2 { name="Rglpk"; version="0.6-4"; sha256="19mzpyimzq9zqnbi05j79b2di3nzaln8swggs9p8sqdr60qvr3d2"; depends=[slam]; }; RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.5.3"; sha256="02v8k0bw70q4qwx4lcdy8p25q7n3ql2ll46lfpqllxa1p26svmfi"; depends=[png sp]; }; - Rhpc = derive2 { name="Rhpc"; version="0.19-276"; sha256="1wbdkqmaq3rdj5r9w0mddkcyiabyd9r26jp3i7i4w055mq2r1gs1"; depends=[]; }; - RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.20-137"; sha256="0vv144sgjhf7fazk633i16fc06g9k43syyxj1g34pi9gsgdcn0nv"; depends=[]; }; + Rhpc = derive2 { name="Rhpc"; version="0.21-247"; sha256="0r4zikqzkcyyvywxq1s8jcq6h559mxilkmzpnl79781hh537jvii"; depends=[]; }; + RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.21-247"; sha256="09276fpkj6xa0zpzzdckclj923b0xr0rhfjiiwfli3kyqi2m37v2"; depends=[]; }; RichR = derive2 { name="RichR"; version="1.0.0"; sha256="0z0ri90jqdmw0vwxd1b4wr9if5cgm1gqpf6g9p1fdvncf4sdi9by"; depends=[magrittr metap plyr reshape2]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; - RiemBase = derive2 { name="RiemBase"; version="0.2.4"; sha256="1h3ascbdgvp56k5ki6qr849296cdkr2bzc33pwwp033rmd8khpr3"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; - Riemann = derive2 { name="Riemann"; version="0.1.0"; sha256="17k7qs0sppr7qwfjkn5v7pv60jzq1p32smd686w36mycd5ir9lp8"; depends=[maotai Rcpp RcppArmadillo Rdpack RiemBase]; }; + RiemBase = derive2 { name="RiemBase"; version="0.2.5"; sha256="1ikv7n8hp23a5dbmnfypdkx74vxwjd9br0hvysnhhpg1ffvr5vhi"; depends=[pracma Rcpp RcppArmadillo Rdpack]; }; + Riemann = derive2 { name="Riemann"; version="0.1.3"; sha256="1yy4vc70raa57iz5chp367qwd8dgy3cdl7kzlkq1jchwry6l27xc"; depends=[CVXR DEoptim ggrepel lpSolve maotai Matrix Rcpp RcppArmadillo Rdimtools Rdpack RiemBase T4cluster]; }; Riex = derive2 { name="Riex"; version="1.0.2"; sha256="03627dik6dd9d2kwv757zanh0i4invmcwg162m9ayhv41ygj5z1l"; depends=[dplyr ggplot2 httr purrr quantmod rjson stringr tibble tidyr TTR urltools xts zoo]; }; - Rilostat = derive2 { name="Rilostat"; version="1.1.7"; sha256="10m7vr9qcn7la01a2p67bcq5dy4gh3wl3yd6j2v3l1yd332n07ag"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; + Rilostat = derive2 { name="Rilostat"; version="1.1.8"; sha256="02fmz4jla151w6bz0zg766q4d34kz1jf43156yr2f90zj8x4jjx4"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble tidyr xml2]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; Rirt = derive2 { name="Rirt"; version="0.0.2"; sha256="0npd2g3a4dh5hlj6l06k1pf0j4731ybqqd4mpi4id16nf81cg104"; depends=[ggplot2 Rcpp reshape2]; }; Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; - RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.5"; sha256="1yd9dxgalk52xisi4lq35zdvyfi4nrfw98flc68jam3jlk0bi9rs"; depends=[MASS nloptr quadprog]; }; + RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.7"; sha256="07mhn8imn4y8kf50x2g7i55dyksh0sryjkzb09rkf64x49vq7ban"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.1"; sha256="06cd1m4liv2bsh2sxplq2zl45g9zq8gsgvh14d0zr0pqm8z4dsyw"; depends=[]; }; RiverLoad = derive2 { name="RiverLoad"; version="1.0.2"; sha256="0v689r9k52x8d4pvk6jlsgr6lp22fn3kn7s69hryyy3pmfmlbrh9"; depends=[imputeTS]; }; Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; }; RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; - Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.6.0"; sha256="1lznn72a203k5ik7pz7736ifpns10qqmnhdz7z62rnxg79fi2aik"; depends=[httr jsonlite Rcpp]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.8.1"; sha256="1q7va9s9p3mc0db8r08bsqnrn2xkn8ascx35jy2xa90vl3sp8sl3"; depends=[httr jsonlite Rcpp]; }; Rlda = derive2 { name="Rlda"; version="0.2.6"; sha256="0i8n01h9072q339p1kiqhcpwphw0d2x6bsszbhgfqc2b160dk2bl"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlgt = derive2 { name="Rlgt"; version="0.1-3"; sha256="0g610v5rch5s31gc7dy9zx4mcgsdhn82y1pmr2rs14qma0v7x515"; depends=[BH forecast Rcpp RcppEigen rstan rstantools sn StanHeaders]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.1"; sha256="06bb939awawpwn4g63b9jzq5b658lsznzy272zl0fy19x62c6bwr"; depends=[Rcpp]; }; Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; - Rlinsolve = derive2 { name="Rlinsolve"; version="0.3.1"; sha256="1x02xxbkchcwwfa2123n9yqfzinfi0zba8zxhp977czzwysy75cc"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; + Rlinsolve = derive2 { name="Rlinsolve"; version="0.3.2"; sha256="1xv500n1480qyakw0isanw1s5ywykhc207hqja4804s5s2m8zfjw"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; Rlof = derive2 { name="Rlof"; version="1.1.2"; sha256="0qhckcnhpzdm0035irip0lngbwxwiaanqf41lkrgkiyapymkfbxg"; depends=[doParallel foreach]; }; Rmagic = derive2 { name="Rmagic"; version="2.0.3"; sha256="0g2f887v820rjyjzcahfrnjvif8iwbhnfnjpd4ib3d9lps69agx1"; depends=[ggplot2 Matrix reticulate]; }; Rmalschains = derive2 { name="Rmalschains"; version="0.2-6"; sha256="1dp0nys320i7pa7c0smz57vj6jk7wjvrnnn90z5w7m6xdb4rm369"; depends=[Rcpp]; }; RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.17.0"; sha256="09lrrxnkkfnbidnmag1czx2xzssdl09348nkc6pqgq6xz36a3mqc"; depends=[dplyr ggplot2 lazyeval lubridate plyr raster rlang tibble tidyr zoo]; }; - Rmbal = derive2 { name="Rmbal"; version="0.1.0"; sha256="1zk769gks2dy5nvfmmjf8bz6k1rg2kfkdhykgclb9kwk5b1b9pm0"; depends=[gsl magrittr minpack_lm pracma Rdpack]; }; RmecabKo = derive2 { name="RmecabKo"; version="0.1.6.2"; sha256="1i08wlfd14wmvwrsvjyhgzxkwzfp4jiwbzymw8m25pvyjxgi7jmy"; depends=[Rcpp stringr]; }; Rmisc = derive2 { name="Rmisc"; version="1.5"; sha256="1ijjhfy3v91fspid77rrkc5dkcb2lav37wc3f4k5lwrn24wzy5y8"; depends=[lattice plyr]; }; Rmixmod = derive2 { name="Rmixmod"; version="2.1.5"; sha256="0cl0bl7554abjwz2as8gqvrzqswlw5727dac5302p7ksy3id9a1j"; depends=[Rcpp RcppEigen]; }; @@ -4287,13 +4434,14 @@ in with self; { RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; Rnightly = derive2 { name="Rnightly"; version="0.1.0"; sha256="08sb4ic7my8b6xcjn9vim8wp4z3kvk0gyp604dg1az7czc7ics5r"; depends=[glue htmltools]; }; Rnmr1D = derive2 { name="Rnmr1D"; version="1.2.5"; sha256="0z97pmkksma225s948r0myd4638cy8vl1x2244w1r6n0cybymnd9"; depends=[base64enc doParallel foreach ggplot2 igraph impute MASS MassSpecWavelet Matrix plotly plyr ptw Rcpp signal speaq XML]; }; - Rnumerai = derive2 { name="Rnumerai"; version="2.1.1"; sha256="09g7zg6f5aw6yy8lpmfx7dxdv3rimczrjwk5348p7gqhgxsy11f5"; depends=[dplyr ggplot2 httr lubridate purrr tidyr]; }; - RoBMA = derive2 { name="RoBMA"; version="1.2.1"; sha256="0cfkdk97d19ga5ml82hchll7hqd60d6sj583w0nb90bsq3pfidhc"; depends=[BH bridgesampling callr coda DPQ extraDistr psych Rdpack rjags runjags scales]; }; + Rnumerai = derive2 { name="Rnumerai"; version="2.1.3"; sha256="108csd8kwflg13misq5xpj7wi9f5p07hvz942s0ra5vyzy934ica"; depends=[dplyr ggplot2 httr lubridate purrr tidyr]; }; + Rnvd3 = derive2 { name="Rnvd3"; version="1.0.0"; sha256="13l5vcbcm88jfsc11ijkvr1s8qk8fflclazs4kl1k2wzpnlr6z6a"; depends=[data_table htmltools htmlwidgets jsonlite lazyeval lubridate viridisLite]; }; + RoBMA = derive2 { name="RoBMA"; version="2.0.0"; sha256="0xj7haxgb850chdvx4an49z7gj4w67b4kvz8g6lm592l9nsydmnp"; depends=[BayesTools bridgesampling callr coda extraDistr ggplot2 psych Rdpack rjags runjags scales]; }; RobAStBase = derive2 { name="RobAStBase"; version="1.2.1"; sha256="0dn93bcyz9kxbj38sc1wisfa6v0666v9gk6y3zq0ihjkkhkmdwq3"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; RobAStRDA = derive2 { name="RobAStRDA"; version="1.2.0"; sha256="1s84j5in4av9zbbszv8j2rpigrd9ws9h4hz64jw7xagsj3xb49kz"; depends=[]; }; RobExtremes = derive2 { name="RobExtremes"; version="1.2.0"; sha256="150p94f0g75g54qcaq4x45lk4sxiyvv1zs4hxkicf46raybvsv89"; depends=[actuar distr distrEx distrMod evd RandVar RobAStBase RobAStRDA robustbase ROptEst startupmsg]; }; RobGARCHBoot = derive2 { name="RobGARCHBoot"; version="1.2.0"; sha256="142r6cmzwhg4xfbpbgrvngncm2wczly2arg6p8612ypjsk4yinrf"; depends=[doParallel doRNG foreach Rcpp RcppArmadillo]; }; - RobKF = derive2 { name="RobKF"; version="1.0.1"; sha256="0av2wdcsfp92dbfk5q0hph0vvk7z567vhv8ck6zrhifc3j0k119a"; depends=[ggplot2 Matrix Rcpp RcppEigen Rdpack reshape2]; }; + RobKF = derive2 { name="RobKF"; version="1.0.2"; sha256="0jmc11s9gl4fin4p6wwd79m3zqbr65p1x8h69qcxmx4cy9af54kq"; depends=[ggplot2 Matrix Rcpp RcppEigen Rdpack reshape2]; }; RobLox = derive2 { name="RobLox"; version="1.2.0"; sha256="1lcylkskfidg576lqfi84l14rvrpfbzmr53hcgzzmfipxhli4dr8"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; RobLoxBioC = derive2 { name="RobLoxBioC"; version="1.2.0"; sha256="01lydp67v7mc4v3svsnl4zqq2jy1czwg9l9blngjn9ky0hv3haf5"; depends=[affy AnnotationDbi beadarray Biobase BiocGenerics distr distrMod lattice RColorBrewer RobLox]; }; RobMixReg = derive2 { name="RobMixReg"; version="1.1.0"; sha256="13w6zvncwh561wzzqy548x0w25rnzf0pfvi5cc6mzn71x5l7cmh2"; depends=[dplyr flexmix glmnet gplots gtools lars MASS RColorBrewer rlang robust robustbase scales]; }; @@ -4304,18 +4452,20 @@ in with self; { RobinHood = derive2 { name="RobinHood"; version="1.6"; sha256="1513z92kk7p1d25zlm597yfswdx4x2w880366cs06j7nfg32izir"; depends=[dplyr httr jsonlite lubridate magrittr profvis uuid]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-5"; sha256="1i119qqlavfj7k0srb8fbbyy2nhsjv9rgrni854liizr9m51cgac"; depends=[robustbase survival]; }; + RobustBF = derive2 { name="RobustBF"; version="0.1.0"; sha256="0wi0k1cjalj1bg5fkzp69mlxl3nlc26xj229gbr9i168bri03sf7"; depends=[]; }; RobustBayesianCopas = derive2 { name="RobustBayesianCopas"; version="2.0"; sha256="0cbibfp4y45cc1disp2r37v0jln0cd9gy3d77z3k9ybj1gg8wa88"; depends=[rjags statip]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.1"; sha256="0wsnvryvrl37acljrda2dm1d8aynqiy66yd2i857m035whixfpqa"; depends=[Rcpp RcppEigen RobustGaSP]; }; - RobustGaSP = derive2 { name="RobustGaSP"; version="0.6.1"; sha256="0bcrgrxlwysk8gg2ln17h4jm78iqlx1d46q0dnm0pxknqihi9jwf"; depends=[nloptr Rcpp RcppEigen]; }; + RobustGaSP = derive2 { name="RobustGaSP"; version="0.6.3"; sha256="14frbm41f75664ik520724psnh6h24qhp09fbwbcm6waqavs3q12"; depends=[nloptr Rcpp RcppEigen]; }; RobustLinearReg = derive2 { name="RobustLinearReg"; version="1.2.0"; sha256="06137f516gyj64qdmwby7m1xnvj4hxzpqj454jn0xcinvl89380w"; depends=[]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; - Rodam = derive2 { name="Rodam"; version="0.1.6"; sha256="1204zj556xciw29bn2dzndv7dfmmvdhyj5r5slgfzhsxyx0ca4i2"; depends=[RCurl]; }; + Rodam = derive2 { name="Rodam"; version="0.1.8"; sha256="13vp6mmqzlfksva8zbjz16chnx1wa7g5nscqhk1q00n87s85zp6x"; depends=[RCurl]; }; + Rogue = derive2 { name="Rogue"; version="2.0.0"; sha256="1dxyxgwy0hylbbgi9vc6g8cll2qxim2wl9zva643g4aq4da5wwsg"; depends=[ape cli fastmatch matrixStats Rdpack Rfast TreeDist TreeTools]; }; RolWinMulCor = derive2 { name="RolWinMulCor"; version="1.2.0"; sha256="0vfsgp0qvv6pnpai8nyy0xzzlzyjwx98xrhlwlks9dbm84wg8vqr"; depends=[colorspace gtools pracma scales zoo]; }; RonFHIR = derive2 { name="RonFHIR"; version="0.4.0"; sha256="1ajpgpp300m0zzqzzwsn8sfy8x751hrr8py9n9xvzjmkgyrh4hhw"; depends=[httr jsonlite R6 stringr]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.2.1"; sha256="0qd6cmzp8fkb75ac79xbh4032vqwax7nk7d6yykpdbn0bnk2kvdi"; depends=[doParallel foreach inflection iterators]; }; - Ropj = derive2 { name="Ropj"; version="0.3"; sha256="01yzlzab7pldyxqb1g8fmc6iig2d4y887bfxqjxckvd4f76vlkqs"; depends=[Rcpp]; }; + Ropj = derive2 { name="Ropj"; version="0.3-1"; sha256="1g3rqcj690034swl8f3i9wn80n3k1zha8b3vmygghpvcrj6hm2qf"; depends=[Rcpp]; }; Rosenbrock = derive2 { name="Rosenbrock"; version="0.1.0"; sha256="0qfdyr66g244jvbnssbnj2b2ng740dr4qmillpnwl4h2hh811syv"; depends=[MASS]; }; Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[ftsa GA]; }; RoughSetKnowledgeReduction = derive2 { name="RoughSetKnowledgeReduction"; version="0.1"; sha256="0zn6y2rp78vay9zwijpzhjpyq1gmcsa13m9fcsxkd1p2c8g5rbmf"; depends=[]; }; @@ -4327,8 +4477,8 @@ in with self; { Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; Rphylopars = derive2 { name="Rphylopars"; version="0.3.2"; sha256="1cpq8581lk2bzz59r4kwdpg6yc9a2qidnrz3wnky2y2z11gyy47v"; depends=[ape doBy geiger MASS Matrix phylolm phytools Rcpp RcppArmadillo]; }; Rpoet = derive2 { name="Rpoet"; version="1.1.0"; sha256="11gp4zg0wc2a21956355rkr3i3dyaabfz0z30z4phn8s7y3yqr92"; depends=[]; }; - Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.4.2"; sha256="0q50f0pp72rwmflxwnridjrcl649kz5h2fm8jfz2pn473mghhya8"; depends=[digest dplyr futile_logger geometry git2r R6 rgl stringr testthat XML]; }; Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; + RprobitB = derive2 { name="RprobitB"; version="0.1.1"; sha256="1wczz78mgz6pjszx4lwv17j83c1aqw2h56865ysisi5v9ddvs0aa"; depends=[mvtnorm Rcpp RcppArmadillo viridis]; }; Rprofet = derive2 { name="Rprofet"; version="2.2.1"; sha256="150123vxdd31p96f3vsri46ryfng2xvnjgm6mdiqczg48xyfpbdp"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf stringr]; }; Rpvt = derive2 { name="Rpvt"; version="0.1.1"; sha256="0ggd6ikp2s9z4086y8w3qzb9jcyyqpby41p3ayjwam94skh154mf"; depends=[Rcpp RcppArmadillo Rdpack]; }; Rquake = derive2 { name="Rquake"; version="2.4-4"; sha256="1929qxqbb6s316zb9x2q1kwz2pvwpvqr1w6iw8vm5vijyf1nvv30"; depends=[GEOmap MBA minpack_lm RPMG RSEIS]; }; @@ -4336,12 +4486,13 @@ in with self; { Rramas = derive2 { name="Rramas"; version="0.1-6"; sha256="16aapvz9j81lvi5ryj41bvn3wf51b0gynnzs0jpvva4m3mvzw6an"; depends=[diagram]; }; Rraven = derive2 { name="Rraven"; version="1.0.13"; sha256="0nlqr1hzbzbz4rb3hjy01iw8czhaqvwmy9hh728fgl5vajwqwn8g"; depends=[NatureSounds pbapply seewave tuneR warbleR]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-16"; sha256="0j9yyvq8r1cgwj3kw1ak6hyazr67f2q0c1m651wdm0wcvm1ajx7f"; depends=[]; }; - Rrelperm = derive2 { name="Rrelperm"; version="0.1.0"; sha256="0cjw91j1sgc27wbx1dcdqk8j4hjkamp3wav78sh4ncdlvkyyz4p0"; depends=[nleqslv Rcpp RcppArmadillo Rdpack]; }; RsSimulx = derive2 { name="RsSimulx"; version="1.0.1"; sha256="0fg19mmgcqz39mxhnxlsd1l1qmkjrvbc3149hrib0mayy1b1fqw4"; depends=[ggplot2 gridExtra]; }; - Rsagacmd = derive2 { name="Rsagacmd"; version="0.1.0"; sha256="0igbshgqd6dgp01zfb7czwap49wlb10p8qsn0p82shd6k5ad9g1l"; depends=[foreign magrittr processx raster rgdal rlang sf stringr tibble XML]; }; + Rsagacmd = derive2 { name="Rsagacmd"; version="0.1.1"; sha256="1x9bsl1gn16cld50a8xdzpvb1y0b5ma2jdald91hpsygp7kf25nm"; depends=[foreign processx raster rgdal rlang sf stars stringr terra tibble XML]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rsconctdply = derive2 { name="Rsconctdply"; version="0.1.3"; sha256="12xc1laxgivv4szp8341pvhmxnzzzzc2s4jhnqsqrbx71lbd9szg"; depends=[dplyr rjson rsconnect]; }; Rserve = derive2 { name="Rserve"; version="1.7-3.1"; sha256="16cg0cak9pvd9l35fjy1lsplxr5ncvb4apzg5mish5kff0cyk89v"; depends=[]; }; + Rsfar = derive2 { name="Rsfar"; version="0.0.1"; sha256="1xskvvvavkdyjhb99qlii9qc0q1m36mxx6g0ybgwbq26lq4ypq7l"; depends=[fda]; }; + Rsgf = derive2 { name="Rsgf"; version="1.0.0"; sha256="1d2bk20ixnfkzbimvsj56arf7brgkwlyrs80snfn5cnvmwic0h8i"; depends=[ggplot2 png stringi stringr]; }; RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.3"; sha256="0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji"; depends=[fields jpeg RANN]; }; Rsmlx = derive2 { name="Rsmlx"; version="3.0.0"; sha256="04d47l8s8hi8gyca4j60zj35wpvr4mml282w586c8x24g62jznvk"; depends=[ggplot2 gridExtra MASS]; }; Rsolnp = derive2 { name="Rsolnp"; version="1.16"; sha256="0w7nkj6igr0gi7r7jg950lsx7dj6aipgxi6vbjsf5f5yc9h7fhii"; depends=[truncnorm]; }; @@ -4349,8 +4500,8 @@ in with self; { Rspotify = derive2 { name="Rspotify"; version="0.1.2"; sha256="1q8ajjx5ghlgxgch9gifvhi2gmsi0ph8pygwrb9jrd3ijahlw5k4"; depends=[dplyr httr jsonlite magrittr plyr]; }; RsqMed = derive2 { name="RsqMed"; version="0.1.7.1"; sha256="18r78svwbnri5283s5nxg4vrp29r6xx13h0n6w634jdpwaiw56gk"; depends=[GMMAT SIS]; }; Rssa = derive2 { name="Rssa"; version="1.0.3"; sha256="1sjl60djgpn4wkgpw1kbm0c376gk1g507dw4bnaqn518qhi8mp6k"; depends=[forecast lattice svd]; }; - RstoxData = derive2 { name="RstoxData"; version="1.1.1"; sha256="1arb37h50jcnvs74pn13w5rbmrs6wmyhchm69vjm9knglb0dyz6q"; depends=[data_table Rcpp xml2]; }; - Rsurrogate = derive2 { name="Rsurrogate"; version="2.0"; sha256="1pjyhlxqi8mcbywa7qa1vxgxr5jca0nc9vm1bx53vr231wgnb7gf"; depends=[survival]; }; + RstoxData = derive2 { name="RstoxData"; version="1.2.1"; sha256="0xfznv0nl7xymlxbd7g0lbxqw1zcyc9mm4mx0nwpw896vz7dvyvw"; depends=[data_table Rcpp stringi units xml2 xslt]; }; + Rsurrogate = derive2 { name="Rsurrogate"; version="3.0"; sha256="1xfz3m5d17sj8f8swvxrx42cpgvn8h7840wg55gdacybw7ng2dw0"; depends=[Matrix survival]; }; Rsymphony = derive2 { name="Rsymphony"; version="0.1-31"; sha256="1acvxh2y9gvcv9cz13ahvsz89w39h35hmjxj2vf0ik3finbi50r8"; depends=[]; }; RtD3 = derive2 { name="RtD3"; version="0.0.1"; sha256="0zbm9pf1z8xl99aj64xy8q3hly98c2rzy34fzkbjyndysvxf9032"; depends=[data_table geojsonsf htmlwidgets jsonlite purrr]; }; Rtauchen = derive2 { name="Rtauchen"; version="1.0"; sha256="09282k6qsjxgm26682npfjymmbx5g8flcc44awmkjl2k4fa1q9ha"; depends=[]; }; @@ -4358,28 +4509,28 @@ in with self; { Rtnmin = derive2 { name="Rtnmin"; version="2016-7.7"; sha256="0f8ii87v29v61b93hx2yxdppp3nvgnl5imp80sbb4bjsdg0mf989"; depends=[]; }; Rtrack = derive2 { name="Rtrack"; version="1.0.0"; sha256="01xgbz37rsbjkix9nlx64qyimsbbgsmyswcv4jbpqasvkp6d480q"; depends=[crayon Hmisc KernSmooth openxlsx pbapply randomForest raster readxl rgeos rjson sp]; }; Rtsne = derive2 { name="Rtsne"; version="0.15"; sha256="0v17vxizrs1msay24xl2bckfajr2c82wpqj07lyssbrq197nwdsn"; depends=[Rcpp]; }; - Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.8"; sha256="0b3f2zkmbyshn19cnaaf042d0zwf43l9jnkqizfhxxwb93a4c1jn"; depends=[]; }; + Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.9"; sha256="0w9ybqvr4bvpa2dyfkrscg4in0x2dkzmxdn1n6003j1rss7f8rw6"; depends=[]; }; RtutoR = derive2 { name="RtutoR"; version="1.2"; sha256="19wmi30b5i6zj673d76gxl6j0k3ppfyl5fqrcs0dwmmadrrvbajq"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes officer plotly rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; - Runuran = derive2 { name="Runuran"; version="0.33"; sha256="11bn2ifynh0sh8j3aam6x3wb791cbbskdxmn5hicl59jsnr6dm6m"; depends=[]; }; - Rvcg = derive2 { name="Rvcg"; version="0.19.2"; sha256="1bl8ld2hqwgi7q8zf4g637jb3h3cnls4nmx0av27s3ggngpmv4ra"; depends=[Rcpp RcppArmadillo RcppEigen]; }; + Runuran = derive2 { name="Runuran"; version="0.34"; sha256="0r6nljacqvn1hlya0vrrfm7hbxydk0iw71dgrzs5djl4dmiw3kal"; depends=[]; }; + Rvcg = derive2 { name="Rvcg"; version="0.20.2"; sha256="04kwn7hp1gyw2daxg2vwfalhggj7x3vl03qd9m0wr5nsccjd29cy"; depends=[Rcpp RcppArmadillo RcppEigen]; }; Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17.1"; sha256="0kl1h4mlvb1bngb40r3dhrjkpnh3lsqddis65hbjzm2pzz20l02m"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; - Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; - Rwhois = derive2 { name="Rwhois"; version="1.0.4"; sha256="0gbw1fvin6hwm4893rif9grpsf5s2snzp7zvz3ra4f5jv5bflvpl"; depends=[stringr]; }; + Rwave = derive2 { name="Rwave"; version="2.5-0"; sha256="1ndj3l8w79sf21fddnf22kxnbc7lc34bxfza66aipd8g5rg4j9p7"; depends=[]; }; + RweaveExtra = derive2 { name="RweaveExtra"; version="1.0-0"; sha256="1jg4dn2x8d74z0wy9j9azvb8f1g0449ji5yl6g964lv2g3fpq6qh"; depends=[]; }; + Rwhois = derive2 { name="Rwhois"; version="1.0.5"; sha256="1yr8a9dz9m1xs2smk1cx65pi7iz3g7yb20q1nf36yjz9rxhb01bd"; depends=[stringr]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1.1"; sha256="0kaxhaa65k1hkhl4kqfxyyk6v967xncrdr5hy8b808zlbqriankc"; depends=[]; }; - Rwofost = derive2 { name="Rwofost"; version="0.6-3"; sha256="0a6fp2hkf51hqmbyp7mlhhnzzxj2gcq0kdrlcm3qmpkv0y44wmmw"; depends=[meteor Rcpp]; }; + Rwofost = derive2 { name="Rwofost"; version="0.8-2"; sha256="14hz56mg792cawpi1j4vfhpm34lzyirds3w6p225cgyvd4wn8dws"; depends=[meteor raster Rcpp terra]; }; Rwordseg = derive2 { name="Rwordseg"; version="0.3-2"; sha256="10jhfalh45rrcm76hwz4b5yl408ndx2wkr0i3q1avx6z6i45d8s6"; depends=[HMM tmcn]; }; - Rwtss = derive2 { name="Rwtss"; version="0.8.0"; sha256="05mbj9vpjgp2jix9g5a2g3z9ywpipqanckqxah8g9chis2kvhwv9"; depends=[assertthat dplyr geosphere ggplot2 httr jsonlite lubridate magrittr purrr reshape2 stringr tibble zoo]; }; + Rwtss = derive2 { name="Rwtss"; version="0.9.1"; sha256="0ihpn96l0bj34ph747q7rfq78sbjjb4hhdjr2a7agc97rrggcr94"; depends=[assertthat dplyr geosphere ggplot2 httr jsonlite lubridate magrittr purrr reshape2 stringr tibble zoo]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-4"; sha256="0qyhxqd5yi4d1prj0i4g3k29zi0mx6wkjx24ynb4arxw6h1vabh4"; depends=[coda lattice MASS MCMCpack mvtnorm]; }; - RxODE = derive2 { name="RxODE"; version="1.0.8"; sha256="0ggdik20i2plgyrhkf2rdqsj3ik8b4cpaq6y5nmwfq87fijirgl7"; depends=[assertthat backports BH checkmate cli dparser ggplot2 inline lotri magrittr memoise PreciseSums qs Rcpp RcppArmadillo RcppEigen rex sitmo StanHeaders sys]; }; + RxODE = derive2 { name="RxODE"; version="1.1.1"; sha256="1v3865wgw967z3kgri9f11s5jg0yhy90zxjjncfa8p4mpvi8w19w"; depends=[assertthat backports BH checkmate cli dparser ggplot2 inline lotri magrittr memoise PreciseSums qs Rcpp RcppArmadillo RcppEigen rex sitmo StanHeaders sys]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; - Rxnat = derive2 { name="Rxnat"; version="1.0.14"; sha256="00fl68pa0c2vy4xlny67pn41lzgm7b97wgg3dwm6z35izca62l11"; depends=[dplyr httr RCurl tibble]; }; Ryacas = derive2 { name="Ryacas"; version="1.1.3.1"; sha256="0c258p7ibas4xbq1wh8c1nfqf6r9d0hicrf8mkkyriw4mb6wmzqq"; depends=[magrittr Rcpp]; }; Ryacas0 = derive2 { name="Ryacas0"; version="0.4.3"; sha256="1qsj6hbydi923bvc8qy1k34nl73xf3fsmr5ww3dw9gzn1kzg2470"; depends=[Rcpp settings xml2]; }; S2sls = derive2 { name="S2sls"; version="0.1"; sha256="0qq1rff2cdgrm5rj69jxgrl71i0wmzyn424fdvcg02zdv9ggqhd3"; depends=[spanel]; }; - SACCR = derive2 { name="SACCR"; version="3.0"; sha256="0h5g2qq3zfx0hdibsghcas8vkwisbw5nr7phj8lrnc5r5g2c487l"; depends=[data_tree jsonlite Trading]; }; + SACCR = derive2 { name="SACCR"; version="3.1"; sha256="1nngjaay4n856a1naw8niw30rhzrxxvnkma6wx721r4zv24nkw3k"; depends=[data_tree jsonlite Trading]; }; SACOBRA = derive2 { name="SACOBRA"; version="1.2"; sha256="1v45l56vifkg3v2bfhk3kfg4fn0dfvrjcgy13zzymm8blr7vazi5"; depends=[mgcv R6 testit]; }; SADEG = derive2 { name="SADEG"; version="1.0.0"; sha256="02ilykbdanx1isbd80c43hqpzkckq6dg40y0rklcnck6v96qky3n"; depends=[]; }; SADISA = derive2 { name="SADISA"; version="1.2"; sha256="0yn7f360wl5ykys5zln159xh2h8bx7zb5ddwhv1migjlqry506hp"; depends=[DDD pracma]; }; @@ -4388,17 +4539,17 @@ in with self; { SAGMM = derive2 { name="SAGMM"; version="0.2.4"; sha256="18ig7ncmrfs5cyc28xpbqk9zjhwqfp7gwix7y2v1j4j2wbdc2hzs"; depends=[lowmemtkmeans mclust MixSim Rcpp RcppArmadillo]; }; SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; SALTSampler = derive2 { name="SALTSampler"; version="1.1.0"; sha256="1lh1w5kcx2sqv5czpfypdbq5mw7pxjbdk0vyg23zzjs26ynbdkn9"; depends=[lattice]; }; - SAM = derive2 { name="SAM"; version="1.1.2.1"; sha256="01gj9k1gf35vm11p0p590irqc5daaiwmq05rl2v3n8h2azaz1c7l"; depends=[Rcpp RcppEigen]; }; + SAM = derive2 { name="SAM"; version="1.1.3"; sha256="0vg9hdlp0q58qwyf7iqij73kia124sn8wcplc81ydvs8z826y7yq"; depends=[Rcpp RcppEigen]; }; SAMBA = derive2 { name="SAMBA"; version="0.9.0"; sha256="0gxc1s82bfhqj1rpmp0fm87frv77rgr8qjqai7zdgfz3jm474any"; depends=[optimx survey]; }; SAMGEP = derive2 { name="SAMGEP"; version="0.1.0-1"; sha256="01f460vk60sl3f9cg2pqcpi5r2rayjhgsp73w1ik1g4rhrs4bl9s"; depends=[abind doParallel foreach mvtnorm nlme nloptr pROC Rcpp RcppArmadillo]; }; SAMM = derive2 { name="SAMM"; version="1.1.1"; sha256="175jk3s9w68ccw1h019380lp9cajfsy3zigcnplp87pcn3qg7x2i"; depends=[Rcpp RcppArmadillo]; }; - SAMTx = derive2 { name="SAMTx"; version="0.1.0"; sha256="087p97ym12pws0cr91a0yrcjnsd14bnkjq4fv5227cw3lx0fp34j"; depends=[BART]; }; + SAMTx = derive2 { name="SAMTx"; version="0.3.0"; sha256="18r03w74fcra3c0xa76jnkkms9pjirdmgb2k1dnz7symqf9cvc5l"; depends=[BART]; }; SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; - SAMtool = derive2 { name="SAMtool"; version="1.1.2"; sha256="1f1ar41j3cwy1rz631mbcdwp8dgr1jwf3wna4rjkh0pwgdx6p7n7"; depends=[corpcor dplyr gplots MSEtool RcppEigen rmarkdown snowfall TMB]; }; + SAMtool = derive2 { name="SAMtool"; version="1.2.2"; sha256="0mpky23njv2svmph0flw029iv3dxsw43q4j5if0zadlnqpz7qvnz"; depends=[corpcor dplyr gplots MSEtool RcppEigen rmarkdown snowfall TMB vars]; }; SAPP = derive2 { name="SAPP"; version="1.0.8"; sha256="1lb148s8rdx1phmx8ihncgb45iqxzracxznys7zyzs8qcf6hm5wq"; depends=[]; }; SAR = derive2 { name="SAR"; version="1.0.3"; sha256="1cnf0hsq82lzssvz5xs2abvnrjxda0g6mjx70a1j223zdwjqmw64"; depends=[AzureRMR AzureStor dplyr httr jsonlite Matrix R6 Rcpp RcppArmadillo RcppParallel]; }; - SARP_compo = derive2 { name="SARP.compo"; version="0.1.3"; sha256="1rps2zfwhxf579v29p929jh1qq71ayy1ij6a5ja6y8rdflzhp4hb"; depends=[car igraph]; }; + SARP_compo = derive2 { name="SARP.compo"; version="0.1.5"; sha256="17pvgc7alv59lxnrz1rj5gdl2lg90jxfwkyn8j802n22r3bmzcsm"; depends=[car igraph]; }; SARP_moodle = derive2 { name="SARP.moodle"; version="0.8.7"; sha256="1yq1rvalibdja12461nivaifhdip3w0qzm0z99zcl0h13r6zl55r"; depends=[base64enc]; }; SASPECT = derive2 { name="SASPECT"; version="0.1-1"; sha256="1d3yqxg76h9y485pl5mvlx6ls1076f80b320yvx4zxmqq9yxmaba"; depends=[]; }; SAScii = derive2 { name="SAScii"; version="1.0"; sha256="0nq859xmrvpbifk8q1kbx3svg61rqdg8p8gr1pn85fr0j3w7h666"; depends=[]; }; @@ -4415,13 +4566,14 @@ in with self; { SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; SBSDiff = derive2 { name="SBSDiff"; version="0.1.0"; sha256="0mw1646dmhxw6zz4pq7j0g3mf9bjn72g43sq7m72r8ma8ciqj7r2"; depends=[]; }; SBdecomp = derive2 { name="SBdecomp"; version="1.1"; sha256="0i7nkmaix2w0kxjaxhkkizpicvm18838qa6n39azxsjqph04ykmd"; depends=[survey twang]; }; - SBmedian = derive2 { name="SBmedian"; version="0.1.0"; sha256="1flydpajgak0sh6v8r67fvjg3fjaylinqjgfrvi91lf29r822zdw"; depends=[expm Rcpp RcppArmadillo Rdpack]; }; + SBmedian = derive2 { name="SBmedian"; version="0.1.1"; sha256="1pxwsp6z1qvhmzprhr8f8i1id5zy4ppq7dxbd6ny2h1r1zvy16xm"; depends=[expm Rcpp RcppArmadillo Rdpack]; }; SC2API = derive2 { name="SC2API"; version="1.0.0"; sha256="1z3rch5238qih5054ial8vjcpj1cdmzgc7cga9agnp58y19a1lcj"; depends=[data_table httr jsonlite]; }; SCAT = derive2 { name="SCAT"; version="0.5.0"; sha256="16dh4l5r8b49n68s571npmk14dnnx6y0np7lzvalg61z31zlya29"; depends=[]; }; SCBiclust = derive2 { name="SCBiclust"; version="1.0.0"; sha256="1wrlzgavri6g7s948775nfls83b8fa5mx3xvbvc8kmbrvdwms6cq"; depends=[sigclust sparcl]; }; SCBmeanfd = derive2 { name="SCBmeanfd"; version="1.2.2"; sha256="045498q71zqgcg8p3665vwd99a8ybf21y0sa7y8316zw66wb1caz"; depends=[boot KernSmooth]; }; SCCI = derive2 { name="SCCI"; version="1.2"; sha256="08ibazxiqmkm3n9g8bfp0cfq26zmg6x2fxb064g3z05nczsf72db"; depends=[Rcpp]; }; - SCCS = derive2 { name="SCCS"; version="1.2"; sha256="13j2vgq4kihkx2bmm8k8z9g2qqfw1kv0imwcicxlxqy7i7dprav9"; depends=[corpcor dummies fda gnm R_methodsS3 survival]; }; + SCCS = derive2 { name="SCCS"; version="1.4"; sha256="0as1711gz3vv0a284cnav0hg2pb5agvpi9h0wyxkq3m8q6vvx069"; depends=[corpcor dummies fda gnm R_methodsS3 survival]; }; + SCEM = derive2 { name="SCEM"; version="1.1.0"; sha256="1fxxkv965gb0wq06rclv05xxlzk8p9l8hzbnqcf0nbbymyn73fqr"; depends=[devtools mathjaxr]; }; SCEPtER = derive2 { name="SCEPtER"; version="0.2-4"; sha256="1098pvq3a7k9czxapszkakc8lr9sfvj7a643iivil5fcqfk0j50r"; depends=[MASS]; }; SCEPtERbinary = derive2 { name="SCEPtERbinary"; version="0.1-1"; sha256="0rab0widfndx94dn1nchhs06q0d57vq2n3xy79p130l9rgp9v489"; depends=[MASS SCEPtER]; }; SCGLR = derive2 { name="SCGLR"; version="3.0"; sha256="10hsvcjgsycap6wkp06snp2zab1ppsp78kyncpbjnm3vp84qm0nz"; depends=[ade4 expm Formula ggplot2 Matrix pROC]; }; @@ -4431,7 +4583,7 @@ in with self; { SCOR = derive2 { name="SCOR"; version="1.1.1"; sha256="0srkn72g1v7hwms68pjmq5sj562blqn27gi628q6q6zlirbmfb9g"; depends=[doParallel foreach iterators]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; SCORNET = derive2 { name="SCORNET"; version="0.1.1"; sha256="13aibikvrc3ril4gqki4fk4y7ha85bniqabmaifzbr1dw5xy2wxm"; depends=[doParallel foreach Matrix pracma Rcpp RcppArmadillo survival]; }; - SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.7"; sha256="1mswjc1q9dj4yvhx1db50iy041mw3azbi40ha3zjp38fflwcwf2z"; depends=[dplyr dynutils dynwrap ggplot2 lmds MASS Matrix mclust pbapply pheatmap princurve purrr ranger RANN RColorBrewer reshape2 tidyr TSP]; }; + SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.8"; sha256="0a9gl5fk3v1nmh5vd228pp2six9r6qy296w5xzhcc5by706r5xq7"; depends=[dplyr dynutils dynwrap ggplot2 lmds MASS Matrix mclust pbapply pheatmap princurve purrr ranger RANN RColorBrewer reshape2 tidyr TSP]; }; SCOUTer = derive2 { name="SCOUTer"; version="1.0.0"; sha256="1s0mmzfz0zhr5v4wagcjwdba8a5f57xr26vwml92dnw6lai37pj4"; depends=[ggplot2 ggpubr]; }; SCPME = derive2 { name="SCPME"; version="1.0"; sha256="0yhsaaa349wbrswcvp7w8c52wzp7rs3528rs4wqa8b3r3fh983mh"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; SCRSELECT = derive2 { name="SCRSELECT"; version="1.3-3"; sha256="118vwnd5gggvdhq7fbs0553l84vh5mhiag41q4svprd7p0pqd9hd"; depends=[mvtnorm]; }; @@ -4441,18 +4593,21 @@ in with self; { SCtools = derive2 { name="SCtools"; version="0.3.1"; sha256="0vsv9ipz0ys8nrvg7rwr23svqlc5lvjpa6yss79rnjzxarjcyjjz"; depends=[cvTools dplyr furrr future ggplot2 magrittr purrr stringr Synth]; }; SDALGCP = derive2 { name="SDALGCP"; version="0.4.0"; sha256="0az11v9dj3pwl5q2kr2apac06b5hg0msi5r17qrcik1d65k18hm0"; depends=[geoR maptools mapview Matrix pdist PrevMap progress raster sp spacetime spatstat spatstat_geom splancs]; }; SDAR = derive2 { name="SDAR"; version="0.9-55"; sha256="1a1dy4wpzhfaqxv4x8knazh4kjx042rnkmvxf62r6wkgbfvq4r6b"; depends=[grImport2 linbin readxl]; }; + SDAResources = derive2 { name="SDAResources"; version="0.1.0"; sha256="0ixz7k9bmwr0n8h71ny5di74gr7yqravzyzji4wdl4yh4siynndy"; depends=[]; }; SDCNway = derive2 { name="SDCNway"; version="1.0.1"; sha256="0zmjc3xh4qvwyrq4ma2k6q08f4ny4iqnl5a640pj17jk8awzwbg0"; depends=[dplyr ggplot2 MASS plyr Rdpack]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; SDEFSR = derive2 { name="SDEFSR"; version="0.7.22"; sha256="10rxq2y7a9rbzgl5s5fdh93jm4w5kqbyyflw5xfsdwymjj9p4b7m"; depends=[foreign ggplot2 shiny]; }; - SDLfilter = derive2 { name="SDLfilter"; version="2.1.0"; sha256="05kf142k32p63icpmad49vw7kxsrvd2hzykcphdk0dahp6jbc9vj"; depends=[data_table dplyr ggmap ggplot2 ggsn gridExtra lubridate maps plotKML plyr pracma raster sp trip]; }; - SDMPlay = derive2 { name="SDMPlay"; version="1.3"; sha256="0653yzw00ix1kh302h1fs735956dw0m2zvp2ng472f8qywrb395s"; depends=[dismo gbm raster]; }; - SDMtune = derive2 { name="SDMtune"; version="1.1.4"; sha256="04r82xzbj6kzl4cnkkhfvc92ky3bmhq55plyd2fjwv9mmyzi72za"; depends=[dismo gbm ggplot2 jsonlite maxnet nnet progress randomForest raster Rcpp rlang rstudioapi stringr whisker]; }; + SDLfilter = derive2 { name="SDLfilter"; version="2.1.1"; sha256="1lyigd578ngsmqpkbbf6jv7lnffnccydlcd6vk9nvvynnx5x8r5a"; depends=[data_table dplyr ggmap ggplot2 ggsn gridExtra lubridate maps plotKML plyr pracma raster sp trip]; }; + SDMPlay = derive2 { name="SDMPlay"; version="2.0"; sha256="1qdvpa57p4p3949rjmvvvz41a3hm3jb34dnn8s2pi04rzrjkys0f"; depends=[dismo raster]; }; + SDMtune = derive2 { name="SDMtune"; version="1.1.5"; sha256="1nfxm1g7kyvn7j7zkjwsn6bi5xz77bjna1dcbak9k8xnk627kxjw"; depends=[dismo gbm ggplot2 jsonlite maxnet nnet progress randomForest raster Rcpp rlang rstudioapi stringr whisker]; }; SDT = derive2 { name="SDT"; version="1.0.0"; sha256="1jwpfd1pnzy9wcl90qv5bgwi19shsw9064dvml9zwbif8yw8dzjj"; depends=[quadprog]; }; SDaA = derive2 { name="SDaA"; version="0.1-3"; sha256="0z10ba4s9r850fjhnrirj2jgnfj931vwzi3kw9502r5k7941lsx0"; depends=[]; }; SDraw = derive2 { name="SDraw"; version="2.1.13"; sha256="1kx8kfga3zspfdgf9vq2lclszrhf3bfwkfhwqri64kn8fdr34jsq"; depends=[covr deldir rgeos sp spsurvey]; }; SE_EQ = derive2 { name="SE.EQ"; version="1.0"; sha256="09fqx2rcqpiv072l6gqgfz9pdhas98q4kkkm7m4y28k13q2gicgl"; depends=[MASS]; }; SEA = derive2 { name="SEA"; version="2.0"; sha256="1pw1509qjjqz63a8biwakdxqgln7kjviacqrjvp1323vf55bi4fs"; depends=[data_table doParallel foreach kolmim KScorrect MASS shiny]; }; + SEAA = derive2 { name="SEAA"; version="0.9.6"; sha256="0f1j8pq3a0liyjxjlc91v8nm5y0fr8fq7qlhdayvkf1fx96srqs2"; depends=[clusterProfiler ggforce ggplot2 ggpubr ggrepel gridExtra org_Hs_eg_db org_Mm_eg_db reshape2 Rsubread tidyr]; }; + SEAGLE = derive2 { name="SEAGLE"; version="1.0.0"; sha256="0f9sxyrnqy0n4pk38wj9y0y7lw0xb2387wrg095ww0vzg3kirga4"; depends=[CompQuadForm Matrix]; }; SEAsic = derive2 { name="SEAsic"; version="0.1"; sha256="1mg01sag6n1qldjvmvbasac86s7sbhi4k99kdkav2hdh6n9jg467"; depends=[]; }; SECFISH = derive2 { name="SECFISH"; version="0.1.7"; sha256="0yd9k6anz9g4psg5kh1bhp0lr1i4y7in1m0mxk4qp14nl1zqy4fy"; depends=[ggplot2 Hmisc optimization]; }; SECP = derive2 { name="SECP"; version="0.1-4"; sha256="0a4j0ggrbs0jzcph70hc4f5alln4kdn2mrkp3jbh321a6494kwl1"; depends=[SPSL]; }; @@ -4462,32 +4617,36 @@ in with self; { SELF = derive2 { name="SELF"; version="0.1.1"; sha256="1yafjhxwsanr33dqy7w9x61ghldr29s8k6h68idq6nnfb77ghjyx"; depends=[bnlearn CompareCausalNetworks data_table Rcpp xgboost]; }; SEMID = derive2 { name="SEMID"; version="0.3.2"; sha256="0v1zrx5xxramsg2zzk7b2fyv6kky7xb1q1cg8vi6zg6ln9vgm2dk"; depends=[igraph R_methodsS3 R_oo R_utils]; }; SEMModComp = derive2 { name="SEMModComp"; version="1.0"; sha256="1za67470f13z8jsy3z588c7iiiz993d3vjqrb8v9fann2r6sf1md"; depends=[mvtnorm]; }; + SEMgraph = derive2 { name="SEMgraph"; version="1.0.3"; sha256="1w4bvg6qk88xbicqw0bncdnkdkbgs9brymxxj0xlpfgi1kr211mx"; depends=[boot cate corpcor dagitty diffusr flip gdata ggm GGMncv glmnet graph igraph lavaan Matrix pbapply protoclust RcppEigen Rgraphviz]; }; SEMrushR = derive2 { name="SEMrushR"; version="0.1.0"; sha256="19prwbh429ra69nz3nx4vzqmb46xssci74rk9mhpnzbi52ycg5gd"; depends=[]; }; SEMsens = derive2 { name="SEMsens"; version="1.0.1"; sha256="0s8x42hpjzpqp9z0r1yj3bm8wgrz2grl0xdnk2ydkm9mmiaclylr"; depends=[lavaan]; }; SETPath = derive2 { name="SETPath"; version="1.0"; sha256="1dpgmki0dhph13h1fd3mbf308746wccgfz5g5gdm7bwbjnmjzd98"; depends=[]; }; SEchart = derive2 { name="SEchart"; version="0.1"; sha256="19gqcd6xzwg37nzc67p88ip4i0v2f59ds85xfw9qq8lybvdm76k2"; depends=[JM]; }; + SEofM = derive2 { name="SEofM"; version="0.1.0"; sha256="0662f4ayr05h33myxbfal682fxfwpl3a94kv4bzc8hil9bcqcznf"; depends=[]; }; SFS = derive2 { name="SFS"; version="0.1.4"; sha256="1pig64pj30yyfzyv97f74gshw4lnklrx0npp4da3absk6anb3iv7"; depends=[Rcpp RcppArmadillo]; }; - SFSI = derive2 { name="SFSI"; version="0.3.0"; sha256="0al7xcblhib7qj9b58dxxp5wd7jmg0mcyh5i106awz5zz99p53gi"; depends=[float]; }; + SFSI = derive2 { name="SFSI"; version="0.4.0"; sha256="0zn6i0mm64b4563zcfv1zsf9rv6jh4nhigl8jp538c3p25jibdp0"; depends=[float]; }; SFtools = derive2 { name="SFtools"; version="0.1.0"; sha256="08k2ywkpk1pzp0qcwm7qx9gnv9hglspl9hrsrrfblagdpkw6rm2x"; depends=[doParallel ff wordspace]; }; SGB = derive2 { name="SGB"; version="1.0.1"; sha256="0j48fx9bf2k8k3ykp629jfi1jbs23673nz6rg54rvcrrsl6hb9v3"; depends=[alabama Formula MASS numDeriv]; }; SGL = derive2 { name="SGL"; version="1.3"; sha256="055mx876ydg4kzvcm6rxfkxqz849zgzkzsskvrfgwj9fs1k6ja2v"; depends=[]; }; SGP = derive2 { name="SGP"; version="1.9-5.0"; sha256="0jsn6fvd5vaw6m6d7l83nphl19xmql4ir50av5x84rsi7qv461gg"; depends=[Cairo callr colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats plotly quantreg randomNames rngtools RSQLite sn toOrdinal]; }; SGPdata = derive2 { name="SGPdata"; version="25.0-0.0"; sha256="0sbsi641krz9c4pr4627jrf58zkdk7gkmk0mm2bw10zkb5dr16my"; depends=[crayon data_table]; }; SHAPforxgboost = derive2 { name="SHAPforxgboost"; version="0.1.1"; sha256="106nsf02b1w3yshb55lwnyw1rl1a60162v2wk8znjz3b4ln3mqj5"; depends=[BBmisc data_table ggExtra ggforce ggplot2 ggpubr RColorBrewer xgboost]; }; - SHELF = derive2 { name="SHELF"; version="1.7.0"; sha256="0rhxagblk8bmwd4wfbjf52dh6y1brajp6xn8rsjx7q0z4brgcr23"; depends=[ggExtra ggplot2 ggridges gridExtra Hmisc MASS rmarkdown scales shiny shinyMatrix tidyr]; }; + SHELF = derive2 { name="SHELF"; version="1.8.0"; sha256="05kr2y5wqbpw3ajf5pbhhfyqv7n3zw3kb7ba2j24sr62jlin3avv"; depends=[ggExtra ggplot2 ggridges gridExtra Hmisc MASS rmarkdown scales shiny shinyMatrix tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; - SHT = derive2 { name="SHT"; version="0.1.3"; sha256="016ll3dclnd3arr7x9vvwls84kypqnnm24r9jmcxkk7n8zl0xwb9"; depends=[fastclime pracma Rcpp RcppArmadillo Rdpack]; }; + SHT = derive2 { name="SHT"; version="0.1.5"; sha256="1yk2y4j8b07lh34r7cpwq6amw7940x6mwn5s1487lz8j26670xmx"; depends=[fastclime pracma Rcpp RcppArmadillo Rdpack]; }; SI = derive2 { name="SI"; version="0.2.0"; sha256="0i6kpaw5yk39skm77nf56ai25clkparz3l8qx0223jrmdqbf97b7"; depends=[]; }; SIBER = derive2 { name="SIBER"; version="2.1.6"; sha256="1ymr1y2c984nnjkj5nwc1mi4ixdwg8d191nn58i0dvckzm922z80"; depends=[dplyr ggplot2 hdrcde magrittr mnormt purrr rjags spatstat spatstat_geom spatstat_utils tidyr]; }; SIBERG = derive2 { name="SIBERG"; version="2.0.2"; sha256="0wfx1dpjd09gb736sm2xhrkba26nwnzn5x575h39n2g33jwqqy2r"; depends=[mclust]; }; SID = derive2 { name="SID"; version="1.0"; sha256="1446zy4rqbw0lpyhnhyd06dzv238dxpdxgmsk34hqv7g3j7q5h1w"; depends=[igraph Matrix pcalg RBGL]; }; - SIDES = derive2 { name="SIDES"; version="1.15"; sha256="1s3qxs7rzff6jr05dz6w13k8ziacbwwvc4bm8rgyjs0bry93zdmb"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; + SIDES = derive2 { name="SIDES"; version="1.16"; sha256="0hp0dkdmc5srqjbpvcq2ynwzrfdx06xn4s4a7a3wlssmn4indj69"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; SIGN = derive2 { name="SIGN"; version="0.1.0"; sha256="1ak4zv5a50iknrxpfw1iffn8gv8mc0rz2gk96nzky9zx6li5drhk"; depends=[GSVA survcomp survival]; }; + SIHR = derive2 { name="SIHR"; version="0.1.0"; sha256="0400ib5gl2lr2qd3468qc474mjg8dpa1rv4j51rrlhgia3g3pjwc"; depends=[CVXR glmnet Matrix qpdf Rdpack scalreg]; }; SII = derive2 { name="SII"; version="1.0.3.1"; sha256="1xvk04b7725ksfd7h4p7px5zanbf6s7xlmjpb7w0nvbi6km2f7ri"; depends=[]; }; SILGGM = derive2 { name="SILGGM"; version="1.0.0"; sha256="1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0"; depends=[glasso MASS Rcpp reshape]; }; SILM = derive2 { name="SILM"; version="1.0.0"; sha256="1iaivpdx18djfm5dqak0q9kfl1xfrnx3gk5x9a4y53h1d7jhl9p6"; depends=[glmnet hdi scalreg SIS]; }; SIMMS = derive2 { name="SIMMS"; version="1.3.1"; sha256="0kgaky1hpvvbs2hbzaili9h9pv34c5drfh0d1rc8vf9099xw8575"; depends=[doParallel foreach glmnet MASS randomForestSRC survival]; }; SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; + SIPDIBGE = derive2 { name="SIPDIBGE"; version="0.1.4"; sha256="0ybqiarswl75dypbzykf2yz2wj2b6hr7y4skbj4xan7r43m22zwf"; depends=[cli COVIDIBGE PNADcIBGE png PNSIBGE POFIBGE purrr rstudioapi tibble tidyverse]; }; SIRE = derive2 { name="SIRE"; version="1.1.0"; sha256="0f624j087k7krg73bqn2qxdgzq66jyhvzz8n024vz3h4hwagxs5n"; depends=[dplyr igraph magrittr MASS Matrix matrixcalc numDeriv psych Rsolnp stringr systemfit]; }; SIS = derive2 { name="SIS"; version="0.8-8"; sha256="1f5czwcgpmmn8habm24p3xh4w7jn2faais2x2gmaiq4dpjfnv6h8"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1-1"; sha256="13mxw0ad4y29f303zarhhdpw2655ckax1g429grnah07p4kfpkgh"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; @@ -4499,6 +4658,7 @@ in with self; { SLC = derive2 { name="SLC"; version="0.3"; sha256="0l0y1sjj0glsb7vwla99ijclcgaq2y85bgz1wqm348n4shsmm2rs"; depends=[]; }; SLDAssay = derive2 { name="SLDAssay"; version="1.8"; sha256="04ykj7s9kpvg5bmf7x16154kfpdy45b7y7hhyh31sxlscv7c5bbp"; depends=[]; }; SLEMI = derive2 { name="SLEMI"; version="1.0.1"; sha256="07bsy0v8grx1l5837jr8mdab08521kxivhwr59q3s0v6f08683yd"; depends=[caret corrplot doParallel e1071 foreach ggplot2 ggthemes gridExtra Hmisc nnet reshape2 stringr]; }; + SLFPCA = derive2 { name="SLFPCA"; version="1.0"; sha256="171pqh3lv1zk508ny2qymryq58w0d6fpcl7jj1n7xwclf9sk5037"; depends=[fda fdapace psych]; }; SLHD = derive2 { name="SLHD"; version="2.1-1"; sha256="0y3ilxd0phmks8zkmpgw7p5zrkwq4k95h976cwk58pavvhfwj9kb"; depends=[]; }; SLICER = derive2 { name="SLICER"; version="0.2.0"; sha256="10i0hfl6js26n8xwk9pldzm9vv7hmii6gzj04lhqy0g3njds25kp"; depends=[alphahull igraph lle]; }; SLIDE = derive2 { name="SLIDE"; version="1.0.0"; sha256="0x4fm29r7icg33k8gw3vqvxib8n9a1xwg484x9yffybips9ka22c"; depends=[]; }; @@ -4514,16 +4674,18 @@ in with self; { SMFilter = derive2 { name="SMFilter"; version="1.0.3"; sha256="1islyqg9w08mvs2kf0ddmdlp885arzp0jy7mqvixjm4ayi5zfrri"; depends=[]; }; SMITIDstruct = derive2 { name="SMITIDstruct"; version="0.0.5"; sha256="12ffxj96w3pi18l0scz5sd3dl37vd4vg2wcfykaxdhf8z142ha3k"; depends=[Biostrings ggplot2 sf]; }; SMITIDvisu = derive2 { name="SMITIDvisu"; version="0.0.9"; sha256="143zz49rx7106v0a46dn1jssqxp60djf5rycfy38167zz7f9wx3y"; depends=[htmlwidgets jsonlite magrittr Rcpp yaml]; }; - SMLE = derive2 { name="SMLE"; version="0.4.1"; sha256="1ssry4kcqz31na2xns2sqfc7nifclhg8bxi1cnri96b1k6zd29qd"; depends=[doParallel foreach glmnet mvnfast]; }; + SMLE = derive2 { name="SMLE"; version="2.0-0"; sha256="0ffm1hcj2ix24ix24lr1h060ps9bcvmf29qi3fyd5pxdqf8vk93y"; depends=[glmnet matrixcalc mvnfast]; }; SMLoutliers = derive2 { name="SMLoutliers"; version="0.1"; sha256="10frs7wcyn368m7fvw2f1cyd0xqr6sv5jziixnyvr8q5fadyl2p0"; depends=[]; }; SMM = derive2 { name="SMM"; version="1.0.2"; sha256="1g1c7ssdcnzgv6b221ya1xrypg2ksahc7qj1042j8nlx5wg29cld"; depends=[DiscreteWeibull seqinr]; }; SMMA = derive2 { name="SMMA"; version="1.0.3"; sha256="1nwxp447m1igm7dlxw5kqw472f8470svwx9awjp2d84m66wplinr"; depends=[Rcpp RcppArmadillo]; }; + SMME = derive2 { name="SMME"; version="1.0.1"; sha256="1iklrj9smjmxjjip8v64ph6gisg5821glck26cy7s15pcj5mdbz5"; depends=[Rcpp RcppArmadillo]; }; SMMT = derive2 { name="SMMT"; version="1.0.7"; sha256="1jbxz905zaxv19rlw9xs29lnc56nyhcslr322kz2rdx1jk83m28f"; depends=[curl dplyr rvest tibble XML xml2]; }; SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-3"; sha256="0zxq84f9i3b86xx6msb25b61gyj9k09iab2b7wg4d93yas9qzayf"; depends=[ellipse MASS nlme survival]; }; SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; }; SMUT = derive2 { name="SMUT"; version="1.1"; sha256="029ishj3jfq957bbkb2xw4jj0qpm4dasb8vpdik43pvd670mgq5s"; depends=[MASS Rcpp RcppEigen SKAT]; }; SMVar = derive2 { name="SMVar"; version="1.3.3"; sha256="17wr4lixy3p32gr4jq02d7zsr88yrbddjsvynzdsdrwbxf4mwqhp"; depends=[]; }; + SNFtool = derive2 { name="SNFtool"; version="2.3.1"; sha256="05hz230aq5wbzhknxzr4iqv3nqjhbpf66n6bp1rc5h2jgz2yfbwq"; depends=[alluvial ExPosition]; }; SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; }; SNPassoc = derive2 { name="SNPassoc"; version="2.0-2"; sha256="16raq5nkm24xqfshncwmf46z2naf2fcixgjs9b7gy1368wn3ahzl"; depends=[BiocStyle ggplot2 haplo_stats mvtnorm plyr poisbinom survival tidyr]; }; SNPknock = derive2 { name="SNPknock"; version="0.8.2"; sha256="121pdgvdffj61hw8x8m76na0cg5iw5gb586q05ikw5d959mmbzrs"; depends=[Rcpp RcppArmadillo RcppProgress Rdpack]; }; @@ -4535,15 +4697,17 @@ in with self; { SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; }; SOLOMON = derive2 { name="SOLOMON"; version="1.0-1"; sha256="0z91wsrgdir25ks4dnirzsg4f1ngal7n40235m3w43j6y6dhkqrc"; depends=[]; }; - SOMEnv = derive2 { name="SOMEnv"; version="1.1.1"; sha256="0ldab56ckprfa511cljka8vpdf9mzx5w1n0v4gc2cm326dmksb76"; depends=[colourpicker dplyr kohonen openair plyr rlist shiny shinycssloaders shinycustomloader]; }; + SOMEnv = derive2 { name="SOMEnv"; version="1.1.2"; sha256="03g1c9ip0bmc5zhnzami3f525m9ic6v5gdhaxc8s7f1nxjf2fcdy"; depends=[colourpicker dplyr kohonen openair plyr rlist shiny shinycssloaders shinycustomloader]; }; SOMbrero = derive2 { name="SOMbrero"; version="1.3-1"; sha256="083zbbazf3d9n9a8cv758fr238qs6a895wbbjyjs6bksc355ykgc"; depends=[ggplot2 ggwordcloud igraph interp markdown metR scatterplot3d shiny]; }; + SOP = derive2 { name="SOP"; version="1.0"; sha256="1c9haq0ds90rwhvmdicaxhzf7vz2m343491sw9qw7w7fbs4fn9fp"; depends=[MASS]; }; + SOPC = derive2 { name="SOPC"; version="0.0.1"; sha256="0xji7c2v8rmsdvpk8g35m8bx9lk0cy29yc5f4q8zv8qjxiy9yz7v"; depends=[elasticnet]; }; SOPIE = derive2 { name="SOPIE"; version="1.5"; sha256="0isvb2vzzpn57bq0ix2pfaqdnl5z8qk6v6fvf15vnxcqg2sm63q5"; depends=[ADGofTest circular]; }; SOR = derive2 { name="SOR"; version="0.23.1"; sha256="1accs4bqy080nfmgkdg7bgamdrcwcn01y6nydvvq12w3v8asdvwh"; depends=[Matrix]; }; SOUP = derive2 { name="SOUP"; version="1.1"; sha256="0k8nlvl4681cz07xjazprcc0jhknfa5hgr7w1qxxmgrp3sprr8r4"; depends=[tensor]; }; SP2000 = derive2 { name="SP2000"; version="0.2.0"; sha256="01wrc7p36js20jv04zhphj2vq7qqfgxmrzic066wij0c0mnh0xn5"; depends=[DT jsonlite pbmcapply purrr rlist tibble urltools XML xml2]; }; SPADAR = derive2 { name="SPADAR"; version="1.0"; sha256="0xzhcy5nglwx9j2jkm3i9xj1iw1y9wbf6rwfjyhpiwwq6qn8mn5r"; depends=[mapproj RCEIM]; }; SPARQL = derive2 { name="SPARQL"; version="1.16"; sha256="0gak1q06yyhdmcxb2n3v0h9gr1vqd0viqji52wpw211qp6r6dcrc"; depends=[RCurl XML]; }; - SPARSEMODr = derive2 { name="SPARSEMODr"; version="1.0.1"; sha256="0l44idsh34c334f340wv9l0b3wzfa0514yb0y0yr005qggn9liii"; depends=[data_table future future_apply geosphere lubridate Rcpp tidyverse viridis]; }; + SPARSEMODr = derive2 { name="SPARSEMODr"; version="1.1.0"; sha256="03yk46f5yipzascgihh4pihgycvl5ikr6jpb23h5p6snxaz1p1cp"; depends=[data_table future future_apply geosphere lubridate Rcpp tidyverse viridis]; }; SPARTAAS = derive2 { name="SPARTAAS"; version="1.0.0"; sha256="1kdb1acm6f7vzl8y9r6ypzy7n5ixlxh7snm7yqii8959dg06nfjw"; depends=[ape cluster colorspace crayon dplyr explor FactoMineR foreign fpc ggdendro ggplot2 htmlwidgets ks leaflet maptools mapview markdown plotly rgdal rstudioapi scatterD3 shiny shinydashboard shinyjqui shinyjs shinythemes shinyWidgets sp stringr tidyr]; }; SPAS = derive2 { name="SPAS"; version="2020.1.1"; sha256="1bvnyxg3npxv63kikmr30jgc14f1s1a5vfh40qs50nbzq84pl6bx"; depends=[BB MASS Matrix msm numDeriv plyr RcppEigen TMB]; }; SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; @@ -4558,14 +4722,17 @@ in with self; { SPIGA = derive2 { name="SPIGA"; version="1.0.0"; sha256="0yd06x5rh1h1s4v9apj43c90rkz8m5kssbny7y5mnw5mr2acds9b"; depends=[GA]; }; SPINA = derive2 { name="SPINA"; version="4.1.0"; sha256="0x7y150iq072qqci2niqk7j8pvhcylb7kdvwambg1r1gi3ffycm9"; depends=[]; }; SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; }; + SPLICE = derive2 { name="SPLICE"; version="1.0.0"; sha256="1rmva1nl05f5dfv4nl7bcj6sa8rnpy9ikshasaa54r40217b5832"; depends=[SynthETIC zoo]; }; SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; }; SPORTSCausal = derive2 { name="SPORTSCausal"; version="1.0"; sha256="1ww1wi3kflwj1f5slfv0mfi7gbaj7y8rk1m3n15szpxb9zm8grks"; depends=[CausalImpact keras]; }; - SPOT = derive2 { name="SPOT"; version="2.4.2"; sha256="01w4gkjprqfj2hymsv6h0xg5hr7kpwrjq06kkh8w4i6grx33yq7x"; depends=[DEoptim ggplot2 glmnet laGP MASS nloptr plgp randomForest ranger rgenoud rpart rpart_plot rsm sensitivity SimInf smoof]; }; + SPOT = derive2 { name="SPOT"; version="2.5.8"; sha256="1lznzh9mwxyqfbqyx7082jkvcb1f4c8zk0667c1r3ivdknmchr9n"; depends=[DEoptim ggplot2 glmnet laGP MASS nloptr plgp plotly randomForest ranger rgenoud rpart rsm]; }; + SPOTMisc = derive2 { name="SPOTMisc"; version="1.2.11"; sha256="0hjcb1kmi2smns0gvndrdrjf0pfdjxm4w1y0h4v72yi126865h9d"; depends=[benchmarkme callr emoa ggsci jsonlite keras mlr plotly RColorBrewer rpart_plot sensitivity SimInf smoof SPOT]; }; SPPcomb = derive2 { name="SPPcomb"; version="0.1"; sha256="1kn3pi3c7g7waill1grm382ixbvnc7z8pbgzqd94hxqzgkivhid7"; depends=[nleqslv]; }; SPREDA = derive2 { name="SPREDA"; version="1.1"; sha256="0fn4p5apjq8zgd3zms2b88ga5wbsv86y59ac5x06w75rf071xglv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-9"; sha256="0kf6mmbvavid3dw2l4fkclk669wi13wkyykhwn5272d6qnhlhhca"; depends=[]; }; - SPUTNIK = derive2 { name="SPUTNIK"; version="1.3.2"; sha256="184zn6hdrgriqa8d0hlh8sh5i95srl3s4qr96bnjf7s77nqaxdzj"; depends=[e1071 edgeR ggplot2 imager infotheo irlba reshape spatstat spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_sparse spatstat_utils testthat viridis]; }; + SPSP = derive2 { name="SPSP"; version="0.1.0"; sha256="15ad0binagm1g1gmk11n0zxy3rbkz3n49cc1jaa0vvzbwcvhh65r"; depends=[glmnet lars MASS Rcpp]; }; + SPUTNIK = derive2 { name="SPUTNIK"; version="1.3.3"; sha256="0sybhxymvym1h271fnjsmk3rca5aj83yxk2pvfcnsx61lfyax2ag"; depends=[e1071 edgeR ggplot2 imager infotheo irlba reshape spatstat spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_sparse spatstat_utils testthat viridis]; }; SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; }; SPlit = derive2 { name="SPlit"; version="1.0"; sha256="10al2qzcxirrzdsgrjhnh7k1l9faqfbqgy50a81bjns0v3kk4m27"; depends=[Rcpp RcppArmadillo]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; @@ -4578,13 +4745,13 @@ in with self; { SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRS = derive2 { name="SRS"; version="0.2.2"; sha256="1f94imnb12gnl2h815l080l3a1fqz7hz30277pvansyyz3ihvani"; depends=[DT shiny shinybusy shinycssloaders vegan]; }; SRTtools = derive2 { name="SRTtools"; version="1.2.0"; sha256="1203i6nqclx0faxyvhdaapmfxy8h95jj83svxriqh1hpava5s1dy"; depends=[magrittr]; }; - SSBtools = derive2 { name="SSBtools"; version="1.1.0"; sha256="03gb86z6yjxwv3v4dkfqy7nnph1vl4sqi47i6cgyp3yk04zw1kw6"; depends=[MASS Matrix stringr]; }; + SSBtools = derive2 { name="SSBtools"; version="1.2.2"; sha256="17xs0zdzsl0hy2hhgr8f7sb1cf5nxza4147198cq7lrrwx39flv7"; depends=[MASS Matrix stringr]; }; SSDL = derive2 { name="SSDL"; version="1.1"; sha256="0m05m00qsjyc69kix124z6nrplqv1yaaag7qxpiizbn664h9hmjb"; depends=[bigstatsr chickn doParallel doRNG foreach glmnet pracma Rcpp RcppArmadillo RcppParallel Rdpack reshape2 rmio]; }; SSDM = derive2 { name="SSDM"; version="0.2.8"; sha256="19l78dkjk76ababkd7xsfn0fy99khfa4i502q4vllpvch4cjz51c"; depends=[dismo e1071 earth gbm ggplot2 mgcv nnet poibin randomForest raster reshape2 rpart scales shiny shinydashboard shinyFiles sp spThin]; }; - SSDforR = derive2 { name="SSDforR"; version="1.5.21"; sha256="11xnbd9f6dci6ilwq0j4vmvnh08hqaydxqqfamin44d4cldh6rn9"; depends=[MAd MASS metafor psych SingleCaseES TTR]; }; - SSHAARP = derive2 { name="SSHAARP"; version="1.0.1"; sha256="1dlfv1clkxra1mkp995zii6p3wdx5igz7i3wj9qvs1ivl27inxa9"; depends=[BIGDAWG data_table DescTools dplyr filesstrings gmt gtools sessioninfo stringr]; }; + SSDforR = derive2 { name="SSDforR"; version="1.5.22"; sha256="0q3xa6h3hsf406cm3q84kv6fsfagmb8q3m2v39icqlhg2900crq5"; depends=[MAd MASS metafor psych SingleCaseES TTR]; }; + SSHAARP = derive2 { name="SSHAARP"; version="1.1.0"; sha256="0x8dinhhfk4q1cck7ms78f4k23430c4wyvlh2qclq0c83acjj4y9"; depends=[BIGDAWG data_table DescTools dplyr filesstrings gmt gtools stringr]; }; SSLASSO = derive2 { name="SSLASSO"; version="1.2-2"; sha256="0vnn9ksdf0qgjflgx1sfj6q6j9jfnarbx2222rh9kb10jy8b16jv"; depends=[]; }; - SSLR = derive2 { name="SSLR"; version="0.9.3.1"; sha256="133m5rpjn3dnyhc7mwg8qzrnqn7kbljrp0aqsc6gi9rhbq3gg57k"; depends=[conclust dplyr foreach generics magrittr parsnip plyr proxy purrr RANN Rcpp RcppArmadillo rlang RSSL]; }; + SSLR = derive2 { name="SSLR"; version="0.9.3.3"; sha256="0fv1jqri3gpzcfs429pgx4hjqmjrglb4g7nfqdihd2hjmq9k4sql"; depends=[conclust dplyr foreach generics magrittr parsnip plyr proxy purrr RANN Rcpp RcppArmadillo rlang RSSL]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; SSN = derive2 { name="SSN"; version="1.1.15"; sha256="057lh2ym82ff3c25vyh97csns4jwlbvxwc4jai0i4yplxf0ccmha"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSOSVM = derive2 { name="SSOSVM"; version="0.2.1"; sha256="11wlalpw6yhvv95xr8vvgxgl4jafc2ghzsk5wqyv71ahxarmrlss"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; @@ -4600,8 +4767,9 @@ in with self; { STARTdesign = derive2 { name="STARTdesign"; version="1.0"; sha256="1q61l3v8ishzax3ppy0pz4ky4l46472l6j36hjlsa8cl01ik1zjf"; depends=[Rcpp]; }; STAT = derive2 { name="STAT"; version="0.1.0"; sha256="0x0qpnlcb52k3x8jwiljsamx81hdcjagfpapv63z054bvig0jvgv"; depends=[corrgram dplyr Hmisc psych psycho rmarkdown rpivotTable shiny]; }; STAT2 = derive2 { name="STAT2"; version="0.1.0"; sha256="09i6vzp5zmi84kdwafb5cbqvja32mdpj8bnp8gnc2wyqwy3a8cqv"; depends=[corrgram dplyr Hmisc psych psycho rmarkdown rpivotTable shiny]; }; - STB = derive2 { name="STB"; version="0.6.4"; sha256="09m9hihsm7f7bzxk4x1w1y6qmy5liqr0ym1rv45ny2380i7y9fl7"; depends=[Matrix VCA]; }; + STB = derive2 { name="STB"; version="0.6.5"; sha256="12r59wj5nxllkif5047a7gw7li9xj71zybw7isgdf3y6iyv4f9pw"; depends=[Matrix VCA]; }; STEPCAM = derive2 { name="STEPCAM"; version="1.2"; sha256="03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; + STFTS = derive2 { name="STFTS"; version="0.1.0"; sha256="1cv2gc9334fbsmmwhqskfssaql6kr9i680p2zkwhm5735dr1h49h"; depends=[e1071]; }; STGS = derive2 { name="STGS"; version="0.1.0"; sha256="0xfwd0jsg3glbr3c5l5yyri4is5kg77ivgr6qlzaxp6p8q7yfzqf"; depends=[brnn glmnet kernlab randomForest rrBLUP]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; @@ -4612,14 +4780,15 @@ in with self; { STV = derive2 { name="STV"; version="1.0.2"; sha256="02cd78z2k08gg5kskw1m53dc2xyl9f8qhcnhvy9n90ckakw6h19h"; depends=[]; }; STraTUS = derive2 { name="STraTUS"; version="1.1.2"; sha256="0n3i7gbycp1f10058h9xlh3yk21w2izdb3xgs793mmh1i1sjy394"; depends=[ape ggplot2 ggtree gmp igraph phangorn RcppAlgos]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; - SUMMER = derive2 { name="SUMMER"; version="1.1.0"; sha256="0q0xch1lzsqpvsdbiwapq2955swd391yk74bgjln9hcdzc72k8x0"; depends=[data_table ggplot2 ggridges Matrix RColorBrewer reshape2 shadowtext sp spdep survey survival viridis]; }; - SUNGEO = derive2 { name="SUNGEO"; version="0.2.22"; sha256="1drvwhmq0186k56f3zrblqvp9q52cjwqzl1bdvkg6fbs2j5bkvdh"; depends=[automap cartogram data_table dplyr fasterize httr jsonlite packcircles purrr RANN raster Rcpp RCurl rlang rmapshaper sf sp spdep udunits2]; }; + SUMMER = derive2 { name="SUMMER"; version="1.2.0"; sha256="1y9mq6smpnhwl6ah6z57z0rcm4jqyi82076w0xb9ghwidncpszz4"; depends=[data_table ggplot2 ggridges Matrix RColorBrewer reshape2 shadowtext sp spdep survey survival viridis]; }; + SUNGEO = derive2 { name="SUNGEO"; version="0.2.24"; sha256="0622xxzg30gqzkw470klbc3mhn8vk9i8pi0dw7sadv11gbwa4dqi"; depends=[automap cartogram data_table dplyr fasterize httr jsonlite packcircles purrr RANN raster Rcpp RCurl rlang rmapshaper sf sp spdep udunits2]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2.9"; sha256="1405gigyjfp8by8nfx4g3rhw9x6r6g7dkpgw52jllv6n4036xa3h"; depends=[dplyr ggplot2 gridExtra kernlab reshape2 scales]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SVN = derive2 { name="SVN"; version="1.0.1"; sha256="0n93lqb1f2s2qvzc8lrcqmr0fhd57xqbi0ymrqqmll31ns679m92"; depends=[data_table igraph memoise]; }; SWIM = derive2 { name="SWIM"; version="0.2.2"; sha256="18w7rgs9i9flzayy9rvqx447wjhxqbglcjqcmajmywgajwdzbrrf"; depends=[ggplot2 Hmisc nleqslv plyr Rdpack reshape2]; }; - SWMPr = derive2 { name="SWMPr"; version="2.4.0"; sha256="1g88w3msvargdx65ryhabkfadi09sww6gcx4aqv1y060a4wax1v1"; depends=[data_table dplyr ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; - SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.6"; sha256="10qai7zfs43x7i7qn1ws3xagq8hi8lx3799fpsp7ckllx1l5mk6p"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer purrr RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr]; }; + SWMPr = derive2 { name="SWMPr"; version="2.4.1"; sha256="1dqhsqigfbfj167mp2h0wfybaymj9zlywh5d3syrrmpr694f9kz5"; depends=[data_table dplyr ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; + SWMPrExtension = derive2 { name="SWMPrExtension"; version="1.1.7"; sha256="07bnpcbxb3zrb2m32h86wbs5irzk6gvv72ygq05gvcjr6q9bh09j"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer purrr RColorBrewer rgdal rgeos rlang scales sp SWMPr tidyr tidyselect]; }; + SWTools = derive2 { name="SWTools"; version="0.2.1.0"; sha256="0g80qrsa0j37xw9wnqg0b6k5ngpzwj5inbir9smni6f0jg5g20sk"; depends=[dplyr forcats ggmap ggplot2 ggrepel httr hydroTSM jsonlite magrittr RColorBrewer reshape2 rlang rmarkdown sf stringr tibble tidyr zoo]; }; SYNCSA = derive2 { name="SYNCSA"; version="1.3.4"; sha256="0n9za302x638s666xs86zy94qch9wn0rln8xy6x9jymhhq9zn0kj"; depends=[FD permute RcppArmadillo vegan]; }; SailoR = derive2 { name="SailoR"; version="1.2"; sha256="04qrnps40845ypapf37jg1c1g05nii6iwk4fv1x5xyca963hl5ii"; depends=[]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; @@ -4632,11 +4801,11 @@ in with self; { SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; }; Scalelink = derive2 { name="Scalelink"; version="1.0"; sha256="0likfjw5999zd0kv1ykby78bl0x3xgh0v1yjssk7fnw1ghkxgdib"; depends=[Rcpp RcppParallel]; }; SciViews = derive2 { name="SciViews"; version="0.9-13.1"; sha256="0wm4vnjh65jxyg82m8l08kanl414qiaz0cc6srshb8sdx2sixkfi"; depends=[ellipse]; }; + ScoreEB = derive2 { name="ScoreEB"; version="0.1.1"; sha256="0lvdywkw2g0xdgf7zj39h1903rd0jg2lzgqq7cfni11pniv6265n"; depends=[data_table]; }; ScoreGGUM = derive2 { name="ScoreGGUM"; version="1.0"; sha256="0f7sjfr3a8b8y1n9lrwyiyyljls3rbz84d9s93psi2fnmjj0kvgw"; depends=[]; }; ScorePlus = derive2 { name="ScorePlus"; version="0.1"; sha256="07hmrx1k256i4cs605j5bpg6brzypryxlcnjkzqak8cw4f26k24q"; depends=[combinat igraph igraphdata limSolve RSpectra]; }; - ScottKnott = derive2 { name="ScottKnott"; version="1.2-7"; sha256="0jxyz0adywfvz0mks5s3kjkb2hds1g0gswshpl73hr1ypr9n39cx"; depends=[]; }; + ScottKnott = derive2 { name="ScottKnott"; version="1.3-0"; sha256="1myf86wfkjxsnm8jvxjjmnmna63pygb3lp27cx92wmg6ms6fh908"; depends=[doBy xtable]; }; ScottKnottESD = derive2 { name="ScottKnottESD"; version="2.0.3"; sha256="0gjpjd8ljnp3v4fc72vhwjgscfw9vfivx710yg683pp30z0sv9nf"; depends=[car effsize forecast reshape2]; }; - ScrabbleScore = derive2 { name="ScrabbleScore"; version="1.0"; sha256="19vgaxnhvqsbllqxfbnhnar2j4g0fkxi7rfsmkks2bd2py81x04m"; depends=[]; }; ScreenClean = derive2 { name="ScreenClean"; version="1.0.1"; sha256="0haanr05g4vwp5apncyzv8i3r61g4xf9ihm8ilcabcgpri56gpjk"; depends=[MASS Matrix quadprog]; }; ScriptMapR = derive2 { name="ScriptMapR"; version="0.0.3"; sha256="18pd23yqn3ai1yfl149081n42hbh0d57hm71s2lhm1z7a5ccjkmf"; depends=[dplyr formatR RCy3 stringr]; }; SearchTrees = derive2 { name="SearchTrees"; version="0.5.2"; sha256="11p81x1klkmxarypxpbisf78dlrmhzzg9y9hxpwz75pks1y56gqg"; depends=[]; }; @@ -4656,11 +4825,12 @@ in with self; { Select = derive2 { name="Select"; version="1.4"; sha256="1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; SelectBoost = derive2 { name="SelectBoost"; version="2.2.0"; sha256="1j525phl1b2b0f4b08az8p74mcgcnmv261d0sqrii8p44474zsy4"; depends=[abind Cascade glmnet igraph lars msgps Rfast spls varbvs]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemNeT = derive2 { name="SemNeT"; version="1.4.1"; sha256="1qda5867gzd10zlq934mp6hy65yfv7xfsy6c9km0f3wrvawv0vn9"; depends=[broom car dplyr effects ggplot2 igraph magrittr pbapply philentropy plyr purrr qgraph RColorBrewer scales]; }; - SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.3.1"; sha256="1c1fdfp2gy69d5ph7wnyi8klvyfbc87sb0jhpipfwdmnfss2nkir"; depends=[easycsv foreign R_matlab readxl rstudioapi searcher SemNetDictionaries stringdist stringi]; }; - SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.8"; sha256="0136mqncpqzrrs11m2w183mg7gxzgmm067gl97d7bzv3gwy2xnk4"; depends=[easycsv knitr]; }; + SemNeT = derive2 { name="SemNeT"; version="1.4.3"; sha256="1qjjbx86sh2gk91bnx0rn3wszlf1w8wxyda5k2mqn4gzgpfplcsp"; depends=[broom car dplyr effects ggplot2 igraph magrittr pbapply philentropy plyr purrr qgraph RColorBrewer scales]; }; + SemNetCleaner = derive2 { name="SemNetCleaner"; version="1.3.4"; sha256="1fll6i4bz2z07h23z5m3x8hqw5rkianh0w6v8gnnkjqlrnacpfp9"; depends=[easycsv editData foreign miniUI R_matlab readxl rstudioapi searcher SemNetDictionaries shiny stringdist stringi]; }; + SemNetDictionaries = derive2 { name="SemNetDictionaries"; version="0.1.9"; sha256="03wgdjw6raf2a15g5a6lp6id537zzvjf0k0gzmycyzpxvifa8ryv"; depends=[easycsv knitr]; }; Semblance = derive2 { name="Semblance"; version="1.1.0"; sha256="1kzrg5z3244nx9y37p092wpangni3fxpx04i5fb4dhrmav4rvgab"; depends=[DescTools fields msos PerformanceAnalytics]; }; SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.4"; sha256="0xxdb3k7d9rqq94d2x862jl67s3pkzwigwlcvrybclm6b5gb86x4"; depends=[Formula MASS survival]; }; + SemiEstimate = derive2 { name="SemiEstimate"; version="1.1.3"; sha256="0zqxy50glx3xkzz6z41nifqxjgva5fk2x6fbbhdm39fham2yb34f"; depends=[]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.6"; sha256="0nga790kcrvmbrx5asp4062711x0kjsccc246l4syiiw30b769ig"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.2"; sha256="0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w"; depends=[cluster MASS nlme]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; @@ -4670,28 +4840,31 @@ in with self; { SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-4"; sha256="04ibqyh18rzj1rgrpw3i1zzr35rvl7z7dzbp8w1lzg9s40yf3ij1"; depends=[ggplot2 glmnet moments ngramrr qdapDictionaries spikeslab stringdist tm]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; SeqDetect = derive2 { name="SeqDetect"; version="1.0.7"; sha256="054b5v0jzk9pj9hrxk31kvcdm789lx8gzh70ivskixz57kajmiss"; depends=[dplyr eventdataR igraph Rcpp]; }; + SeqExpMatch = derive2 { name="SeqExpMatch"; version="0.1.0"; sha256="0i4hsmkapsavhqx99zk9d2qajaqh8kchdf8qy3rbdwgchiiwzybv"; depends=[checkmate doParallel R6]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.3.1"; sha256="1dvl65n60j7wl0jdb0myi9hprlr9grq6nf9m68gzxm9sz3h8lpvh"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqKat = derive2 { name="SeqKat"; version="0.0.8"; sha256="09b5zrp41241ha5q8bxll9n12sn11hsbv46g2ld1lqsy2razivr4"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; + SeqNet = derive2 { name="SeqNet"; version="1.1.3"; sha256="1ix3c249q758si6670hqa56g1snqqwqdrwshfwajvynl7k2zqzmv"; depends=[fitdistrplus ggplot2 igraph mvtnorm purrr Rcpp Rdpack rlang tibble]; }; SequenceSpikeSlab = derive2 { name="SequenceSpikeSlab"; version="0.1.1"; sha256="079qm4klgaml99j4cshy3n54pg7q537zlagib4xd8mswdmqdvll6"; depends=[Rcpp RcppProgress selectiveInference]; }; - Sequential = derive2 { name="Sequential"; version="3.3.1"; sha256="19rpjrgvq5igvia1jklfqxqw830r7f6ri1rg68y32mhyrb4nw29p"; depends=[boot]; }; + Sequential = derive2 { name="Sequential"; version="3.4"; sha256="1kd3vkjsrzwlxikjlhar8cpwhkbwmmpgp9vx91ninpr42lx9qr6s"; depends=[boot]; }; SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; }; SetMethods = derive2 { name="SetMethods"; version="2.6"; sha256="1yvn5jcv83cd3z4sd7fws1j298fljzcif6037b65wy6ywrrbb73x"; depends=[admisc betareg fmsb ggplot2 ggrepel QCA scatterplot3d stargazer]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; SetTest = derive2 { name="SetTest"; version="0.2.0"; sha256="08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="4.0.1"; sha256="17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p"; depends=[cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba jsonlite KernSmooth leiden lmtest MASS Matrix matrixStats miniUI patchwork pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR Rtsne scales scattermore sctransform SeuratObject shiny spatstat_core spatstat_geom tibble uwot]; }; - SeuratObject = derive2 { name="SeuratObject"; version="4.0.0"; sha256="03k27z7g76wy7mfja2cpxq183xk0906k9gxb2j6p1zw341gv4gii"; depends=[Matrix Rcpp RcppEigen rlang sctransform]; }; + Seurat = derive2 { name="Seurat"; version="4.0.4"; sha256="1pa2v29mx39swblzwzqc7rpql2rizhi2nj426r1i63wyla6lcxc0"; depends=[cluster cowplot fitdistrplus future future_apply ggplot2 ggrepel ggridges httr ica igraph irlba jsonlite KernSmooth leiden lmtest MASS Matrix matrixStats miniUI patchwork pbapply plotly png RANN RColorBrewer Rcpp RcppAnnoy RcppEigen RcppProgress reticulate rlang ROCR Rtsne scales scattermore sctransform SeuratObject shiny spatstat_core spatstat_geom tibble uwot]; }; + SeuratObject = derive2 { name="SeuratObject"; version="4.0.2"; sha256="076bd6xmpnspnz7raw03mfgknnygx79sj3c9q6yhpanc46i9gvk4"; depends=[Matrix Rcpp RcppEigen rlang]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; ShapePattern = derive2 { name="ShapePattern"; version="2.1.0"; sha256="10lqapjw2vypz1rrwgr7maw79g5j7g3gfp38g88w1sxlxasmx7by"; depends=[igraph landscapemetrics raster rgdal rgeos sp]; }; ShapeRotator = derive2 { name="ShapeRotator"; version="0.1.0"; sha256="1pg2m1wh7fbchm8gp3mngfnf5g2rbhvzim1bpzqyvxqpx6ynicsa"; depends=[plot3D]; }; ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.4"; sha256="15ds3024qcvnq3pnbhpyd6hbif26mdzw1srqv44hwsllgzpi7602"; depends=[coneproj raster]; }; - SharpeR = derive2 { name="SharpeR"; version="1.2.1"; sha256="1xcnbjwcqc9mhb6kqcarkmjcr5zrn5hryfp4i4rayra9yk9k18r8"; depends=[matrixcalc sadists]; }; - ShellChron = derive2 { name="ShellChron"; version="0.2.8"; sha256="09yqbsfpc3d7z85g3i4b4lkmjr2hf5vk32lsi4fm04n0ips4w19a"; depends=[dplyr ggplot2 ggpubr magrittr rtop scales tidyr tidyverse zoo]; }; + ShapleyValue = derive2 { name="ShapleyValue"; version="0.2.0"; sha256="05ziyvvd81l0lx572in9snndnjdq8y4wkd8bxqs0y979l49yr6fd"; depends=[kableExtra MASS tidyverse]; }; + SharpeR = derive2 { name="SharpeR"; version="1.3.0"; sha256="1xq2m53n2gc706lyd16gccllx2wgwdrqkfpf79jwwdmipqfqnxjx"; depends=[matrixcalc]; }; + ShellChron = derive2 { name="ShellChron"; version="0.4.0"; sha256="1xb06zszwirn5l63qa9g99q9by58sdqpg8s6kiq70z5qqnlgiq5c"; depends=[dplyr ggplot2 ggpubr magrittr rtop scales tidyr zoo]; }; ShiftConvolvePoibin = derive2 { name="ShiftConvolvePoibin"; version="1.0.0"; sha256="0pj3vynm8afns2kcwvmramxgbd0s2ksyyc5iha6p4dw2nz4hahc7"; depends=[]; }; ShiftShareSE = derive2 { name="ShiftShareSE"; version="1.0.1"; sha256="09sm3frapxv1zhxy84wqyaxdk5jx62ijszfa34zlknlgivividfy"; depends=[Formula]; }; ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; - ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.6"; sha256="09pj2h48zppf01qlyh6rdiq7783rrdjab1288rniz81kslwy6kf4"; depends=[data_table deltaPlotR difNLR difR dplyr DT ggdendro ggplot2 gridExtra knitr latticeExtra lme4 ltm magrittr mirt msm nnet plotly psych psychometric purrr rlang rmarkdown rstudioapi scales shiny shinyBS shinydashboard shinyjs stringr tibble tidyr VGAM xtable]; }; - ShinyQuickStarter = derive2 { name="ShinyQuickStarter"; version="2.0.0"; sha256="1958g3hqaid26ig846zlcw16zprk5s61jvhrpfm5m1l0hbz2vw1j"; depends=[colourpicker data_table dplyr fs ggplot2 plotly reshape2 shiny shinyalert shinydashboard shinyFiles shinyjs shinyWidgets stringi stringr styler]; }; + ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.3.7"; sha256="1z5rw2i3hvjydyq77nx7ah4m4l45xq9hn01sclbxsdaivsg2hmmq"; depends=[data_table deltaPlotR difNLR difR dplyr DT ggdendro ggplot2 gridExtra knitr latticeExtra lme4 ltm magrittr mirt msm nnet plotly psych psychometric purrr rlang rmarkdown rstudioapi scales shiny shinyBS shinydashboard shinyjs stringr tibble tidyr VGAM xtable]; }; + ShinyQuickStarter = derive2 { name="ShinyQuickStarter"; version="2.0.1"; sha256="19k46hwcab33l6dc43dp4hvvr366qh3z2jjw3b79x7f824wampnn"; depends=[colourpicker data_table dplyr fs ggplot2 miniUI plotly reshape2 shiny shinyalert shinydashboard shinyFiles shinyjs shinyWidgets stringi stringr styler]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; ShortForm = derive2 { name="ShortForm"; version="0.4.6"; sha256="0r8flmfhm47kyzy97j3mr87srfsxwlqqsx7v0ay9qm7q2jfg6xsw"; depends=[ggplot2 lavaan stringr tidyr]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.4.0"; sha256="0iyri3syjk9xv49d87fdyhnxg5c5x827vnak8vgckkkp62sdln2q"; depends=[Rcpp RcppArmadillo]; }; @@ -4701,27 +4874,27 @@ in with self; { SigOptR = derive2 { name="SigOptR"; version="0.0.1"; sha256="1sylchhhz6kx4r8jx95cvsmjsacjh8pin7acf2fyw2a4nlx9r1a6"; depends=[httr jsonlite]; }; SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; SightabilityModel = derive2 { name="SightabilityModel"; version="1.4.1"; sha256="1nbz8307jspg40ldh4icsananisa396fd7p2xz13mc9lsk2pa4dc"; depends=[formula_tools Matrix msm plyr survey]; }; - Signac = derive2 { name="Signac"; version="1.2.0"; sha256="0z0lnbnb83fhiabjb6x7xll4xa6kaf9b3dxl5palh8rnd4h2hr05"; depends=[BiocGenerics data_table dplyr fastmatch future future_apply GenomeInfoDb GenomicRanges ggforce ggplot2 ggrepel ggseqlogo IRanges irlba lsa Matrix patchwork pbapply qlcMatrix Rcpp RcppRoll Rsamtools S4Vectors scales Seurat SeuratObject stringi tidyr]; }; - SignacX = derive2 { name="SignacX"; version="2.2.0"; sha256="0851pi5z9hvvimsds3r6hhnwbr2bg559la1isbm7sb3gcv4pij04"; depends=[igraph jsonlite lme4 Matrix neuralnet pbmcapply RColorBrewer RJSONIO Seurat]; }; - SignifReg = derive2 { name="SignifReg"; version="3.0"; sha256="0yvbf56ap29rfm10vdv3mc67x1aklkwwapi72vzsi2xhrgwf395d"; depends=[]; }; + Signac = derive2 { name="Signac"; version="1.4.0"; sha256="0ca9ls5j6cgwkyzmxim9lb57zp9nsn2xrqm3w0wbhw5kar0i4yz0"; depends=[BiocGenerics data_table dplyr fastmatch future future_apply GenomeInfoDb GenomicRanges ggforce ggplot2 ggrepel ggseqlogo IRanges irlba lsa Matrix patchwork pbapply qlcMatrix Rcpp RcppRoll Rsamtools S4Vectors scales Seurat SeuratObject stringi tidyr]; }; + SignacX = derive2 { name="SignacX"; version="2.2.4"; sha256="1qm0slmmfn7rwr2mdsa6d3h575i4c243iffh6791iklbs3jw6n73"; depends=[igraph jsonlite lme4 Matrix neuralnet pbmcapply RColorBrewer RJSONIO Seurat]; }; + SignifReg = derive2 { name="SignifReg"; version="4.2"; sha256="0bgw6dkn15rlpcqfpbar3nxvcvwd0afa3lss4idnb65kvcyzzljk"; depends=[car]; }; Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.8"; sha256="16pzcs1g5ihza9a2glnkgd5pxi77l6w34vkn0vxcb78gc6syhbrd"; depends=[Deriv MASS]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; SimBIID = derive2 { name="SimBIID"; version="0.2.1"; sha256="01gkkgxx5x9pkwsmpmf1rg4i0ls7fl6yv6pcg8gscr51bnxsrwpp"; depends=[coda dplyr ggplot2 mvtnorm purrr RColorBrewer Rcpp RcppArmadillo RcppXPtrUtils tibble tidyr]; }; SimComp = derive2 { name="SimComp"; version="3.3"; sha256="04qkis20zk0z42bv4nznffqlpwby0y0ij27gj4sa0ha864pg0hi5"; depends=[mratios multcomp mvtnorm]; }; SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; - SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.7.0"; sha256="10snjwrh95407iracbc52b5cvr3sp2539rrjp7fw63q50pjl285v"; depends=[evd]; }; + SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.8.0"; sha256="0gxrhsy8dkp2iyzh2x9z6m6cxx6mxiwinh86dk6wwiqr2zkasn9w"; depends=[evd]; }; SimCorrMix = derive2 { name="SimCorrMix"; version="0.1.1"; sha256="1mx8xkg1nbh4x4xr6m672zyg00s3lky2sy5mz7dfkw40vz2bwi53"; depends=[BB ggplot2 MASS Matrix mvtnorm nleqslv SimMultiCorrData triangle VGAM]; }; - SimDesign = derive2 { name="SimDesign"; version="2.3"; sha256="1513ypxf7awc2v7ci3dclj5lmfgriljrd6lvbs58xnxaz9sbmwz5"; depends=[dplyr foreach pbapply plyr]; }; + SimDesign = derive2 { name="SimDesign"; version="2.7.1"; sha256="0ja7inc74y7n9dxl8k2qrvip7v2a4z3zgpgmjzzhl4aja5f5xx5m"; depends=[dplyr foreach pbapply RPushbullet sessioninfo]; }; SimDissolution = derive2 { name="SimDissolution"; version="0.1.0"; sha256="1rdsxykh740h22ln635m0ysm00pdw94vp7qhgify4mcvc46c3632"; depends=[alabama dplyr mvtnorm]; }; SimEUCartelLaw = derive2 { name="SimEUCartelLaw"; version="1.0.1"; sha256="1wg9sayk55mp3f2qykvfk0cbqh050vh0n1fhpq4fmlxqll87aml9"; depends=[plot3D plot3Drgl rgl]; }; + SimEvolEnzCons = derive2 { name="SimEvolEnzCons"; version="1.0.2"; sha256="0h3v2lbb3my78brhc5yxk448pr2rlrlyd7l32lczh76j4hx0k0bw"; depends=[ade4 RColorBrewer rgl scatterplot3d]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; - SimInf = derive2 { name="SimInf"; version="8.2.0"; sha256="18lmmp8yqhx7zf8az3as0sk70ljw0bj6jr8g45n8f15fxf72fcql"; depends=[digest Matrix]; }; + SimInf = derive2 { name="SimInf"; version="8.4.0"; sha256="0fpi5fnr4pgdq30s4p64kv1nl20znxnqk61b2cr7z2pj6yhqa265"; depends=[digest MASS Matrix]; }; SimJoint = derive2 { name="SimJoint"; version="0.3.7"; sha256="03xf8n1fbbq63wz8kyj19h9vqz14z463cv8xqhmaknlamnnyhis5"; depends=[Rcpp RcppArmadillo RcppParallel]; }; SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.2"; sha256="0brszbqxf40y65xp96c5hp7hhvz3gv0xlg93r5ik8qdh0bn0y1sw"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; }; SimPhe = derive2 { name="SimPhe"; version="0.2.0"; sha256="01kzypahw41jk8s2c92h0k9w32yaicis07wb6k8qlqcmv0zj8xry"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.4.4"; sha256="0z7wwwl814bwaijkmg9wcdj5xisiamc9yqypmk0hzj950569aj8p"; depends=[dplyr kinship2]; }; - SimRVSequences = derive2 { name="SimRVSequences"; version="0.2.7"; sha256="0idrm60cqncyhdxylg1gs7gm5slvh8346s3gmf0f2dy57s0mq7ny"; depends=[dplyr intervals kinship2 magrittr Matrix reshape2 rlang SimRVPedigree]; }; SimReg = derive2 { name="SimReg"; version="3.3"; sha256="1liwwbi3zqrcbqx5przdlzhnq7jvyjd6yhaxalhwggzf9zv7w8ci"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; @@ -4735,25 +4908,25 @@ in with self; { SimpleTable = derive2 { name="SimpleTable"; version="0.1-2"; sha256="1rkybrp7zlb7cj37799npss1ldic0yf519q5l7a6ikal4yl1afyb"; depends=[hdrcde locfit MCMCpack]; }; SimplicialCubature = derive2 { name="SimplicialCubature"; version="1.3"; sha256="06dpbawn650lzybd5j4xkygbg5s2nqfz6b4g0skm4z7lsb2d9dhb"; depends=[]; }; SimplifyStats = derive2 { name="SimplifyStats"; version="2.0.4"; sha256="08775g6fdx09y8pkfq4k8zxbxpwah7yqq5cg30lmxl7zrpmza5hv"; depends=[assertthat broom dplyr moments tibble]; }; + SimplyAgree = derive2 { name="SimplyAgree"; version="0.0.2"; sha256="1jax36yqr1j9zwbv69x81fyyd5ymy84k9mvvn3qvvngab6daqxlg"; depends=[boot cccrm dplyr emmeans ggplot2 jmvcore lme4 magrittr sjstats stringr tidyr tidyselect]; }; Simpsons = derive2 { name="Simpsons"; version="0.1.0"; sha256="1pm6wga1yxc35zgz72plzq23d3l4bbzfdvhszdxmkn1pkk64h8ms"; depends=[mclust]; }; SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; SingleCaseES = derive2 { name="SingleCaseES"; version="0.4.4"; sha256="1srp9cc6s0ff92gdcarjqsl3pq492icv1q2l52x78ah3xzkmsvx3"; depends=[dplyr magrittr purrr rlang tidyr tidyselect]; }; SiteAdapt = derive2 { name="SiteAdapt"; version="1.1.0"; sha256="1k79j29d92a8m578xj61iavljikksdmjr2vlzwmdvxpa6rp1i2ff"; depends=[ggplot2 ggpubr glmulti hydroGOF hyfo RColorBrewer solaR]; }; SitesInterest = derive2 { name="SitesInterest"; version="1.0"; sha256="06l6i6jnzwj683cvd9a9dg4nlb1wy1v3wb561y97a25bikm3mfy6"; depends=[plotrix]; }; - SixSigma = derive2 { name="SixSigma"; version="0.9-52"; sha256="07s4an2az2pgqhq9c08jrf6b95nrs1b3r1092d53n1ps8wbdmbln"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; + SixSigma = derive2 { name="SixSigma"; version="0.10.3"; sha256="0n3cpl4104p8p9fwmkybfrgr02gvd66cszp7rjpp0ixspxjc6fls"; depends=[e1071 ggplot2 lattice nortest reshape2 scales testthat xtable]; }; SizeEstimation = derive2 { name="SizeEstimation"; version="1.1.1"; sha256="1rz57y76hzp880511kzm7nhxf201n0dr7ccip6slrjz784dl7s27"; depends=[MCMCpack msm]; }; SkewHyperbolic = derive2 { name="SkewHyperbolic"; version="0.4-0"; sha256="1blxibjrgb738q2ybavp4q3d6yn7hayhg851ysghp118wpl32nwr"; depends=[DistributionUtils GeneralizedHyperbolic]; }; SkeweDF = derive2 { name="SkeweDF"; version="0.1.0"; sha256="11i6zbjhkcrr6g848sms21l1ixk401vd50cia74j78d4nvl8d8zc"; depends=[dplyr matrixStats optimr purrr Rcpp stringr zipfR]; }; Skillings_Mack = derive2 { name="Skillings.Mack"; version="1.10"; sha256="0zxqiw87avw2rb2acj7mvpyfkf7iwnkshg73ib74y5ml9awmg2mw"; depends=[MASS matrixcalc]; }; Sky = derive2 { name="Sky"; version="1.0"; sha256="02vjdggvanzsjx7ihxskapp5d5dlyalj02122wmarj8qf1ha1i2m"; depends=[EBImage]; }; - SlaPMEG = derive2 { name="SlaPMEG"; version="1.0.0"; sha256="1snjcm9rqlgx41kphj0nadlny3yxpdczkvjisk4vp49fp381j4z7"; depends=[ggplot2 globaltest lcmm lme4 magic mvtnorm reshape2]; }; - SleepCycles = derive2 { name="SleepCycles"; version="1.1.2"; sha256="1scqfpzplwya9932l469s5bwfmnayyzbynlmq2mcyj1jk82dmm95"; depends=[devtools ggplot2 plyr reshape2 stringr viridis]; }; + SlaPMEG = derive2 { name="SlaPMEG"; version="1.0.1"; sha256="0ikhx14czcavfxppsaf0b6506l4gwhwk4p3wilr9zykw17s8ghzm"; depends=[ggplot2 globaltest lcmm lme4 magic mvtnorm reshape2]; }; Sleuth2 = derive2 { name="Sleuth2"; version="2.0-5"; sha256="18rp23dr55p2zqxqj5i86gi8j25b0y7hc2p88rxqszgmbyn5ynhi"; depends=[]; }; Sleuth3 = derive2 { name="Sleuth3"; version="1.0-3"; sha256="0ngwri80cwqs50wjza8qyzzwign4ag1ck7fa1x7q5x08w9x6w08m"; depends=[]; }; SlidingWindows = derive2 { name="SlidingWindows"; version="0.2.0"; sha256="0hvxg4hrk3rb1wxhi71rgamxd8wcwys569137znfs0y8j6yvf0jj"; depends=[DCCA nonlinearTseries PerformanceAnalytics TSEntropies]; }; SmCCNet = derive2 { name="SmCCNet"; version="0.99.0"; sha256="0ixvh1pd1gzbscwg4xjlcgxq5c9vqahil0fysfjc3fnba3wiidzx"; depends=[igraph Matrix pbapply PMA]; }; SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.8.0"; sha256="10acyw5dhifh4ksyd1fwny3if4j75y1wk1fm52hjpg30ja0rkyxh"; depends=[Matrix SSBtools]; }; - SmartEDA = derive2 { name="SmartEDA"; version="0.3.7"; sha256="0gfwnvdp4aarhsman967dss5vyckxqsh4aln0d9b73g4nb235zwq"; depends=[data_table GGally ggplot2 gridExtra ISLR qpdf rmarkdown sampling scales]; }; + SmartEDA = derive2 { name="SmartEDA"; version="0.3.8"; sha256="07686x8l25pd0166n6s86zlnj8s10g6by2kd55rfh5didqx8zmsv"; depends=[data_table GGally ggplot2 gridExtra ISLR qpdf rmarkdown sampling scales]; }; SmartMeterAnalytics = derive2 { name="SmartMeterAnalytics"; version="1.0.3"; sha256="0i8my7ngzdbay3cld8axhvbri0nh0dd1dmv2lbsgyx4adr5hb30f"; depends=[FNN futile_logger plyr stinepack zoo]; }; SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; SmarterPoland = derive2 { name="SmarterPoland"; version="1.8"; sha256="19pxr1zch2bm5jw676dp0p2crvmdmvzyxz07vhx926axpb4i0xbp"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; @@ -4772,27 +4945,27 @@ in with self; { SoftRandomForest = derive2 { name="SoftRandomForest"; version="0.1.0"; sha256="1k439hcp53yg6f2x4bgafsri4jjgpva97dphzsdk5icfs5d38bh8"; depends=[boot]; }; SoilHyP = derive2 { name="SoilHyP"; version="0.1.5"; sha256="0mpsy1fzy33vhb1la2y87c95bhc0ci4jfwzbsd47jz1s3pw6vzrl"; depends=[data_table lubridate]; }; SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; }; - SoilTaxonomy = derive2 { name="SoilTaxonomy"; version="0.1.3"; sha256="18d3aslr1i00s1qmm40jxjgy32czs2hf6lvl8cy13lak7f795n6y"; depends=[stringr]; }; - Sojourn = derive2 { name="Sojourn"; version="1.0.2"; sha256="0y9mcz0ysdjw16aflf6xa8w7ib5lx7mzcd485xfzyhsacwz864zi"; depends=[dplyr lubridate magrittr nnet PAutilities Rcpp rlang svDialogs zoo]; }; + SoilTaxonomy = derive2 { name="SoilTaxonomy"; version="0.1.4"; sha256="061m4di9h03phhx78xx3w8hvcssvkw96vz3szyghkmf7ill15w1n"; depends=[stringr]; }; + Sojourn = derive2 { name="Sojourn"; version="1.1.0"; sha256="0dy3xb6nazify29xir2krj9509bqa68b1jwq3lvvhfakxjqm0j05"; depends=[dplyr lubridate magrittr nnet PAutilities rlang svDialogs zoo]; }; Sojourn_Data = derive2 { name="Sojourn.Data"; version="0.3.0"; sha256="1flxiga9szhifndrhmf4blgms477gnnf4gd6wkxqgv3vgisc4q4i"; depends=[]; }; SolveRationalMatrixEquation = derive2 { name="SolveRationalMatrixEquation"; version="0.1.0"; sha256="1m0b4sb247k6mlagvs4nj42ga9p48g9736lmhar7v1c5qhi7pw3v"; depends=[]; }; SolveSAPHE = derive2 { name="SolveSAPHE"; version="2.1.0"; sha256="1r42h19l186jry2wxmrp9y1jdcwr7wx4an3nmryc4l33f48idbfr"; depends=[]; }; SongEvo = derive2 { name="SongEvo"; version="1.0.0"; sha256="0mc5wlf5axbflys6g8b7xg0di3wwkli7q0a9fby6598fq9hbaqpd"; depends=[boot geosphere lattice sp]; }; SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; }; - SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; - SortedEffects = derive2 { name="SortedEffects"; version="1.3.0"; sha256="0fmdkl1wyfrn0njkvjqsr4xfp8shzi89vw7vk2i5mrq9ifjxgj58"; depends=[boot dummies Hmisc pbapply quantreg rlist SparseM]; }; + SortedEffects = derive2 { name="SortedEffects"; version="1.6.0"; sha256="1rs7cx81fig4mnnk8bzma36a00qb8sywy2qj228hvjwk3ghpb3bi"; depends=[boot dummies Hmisc pbapply quantreg SparseM]; }; SoundShape = derive2 { name="SoundShape"; version="1.1.0"; sha256="0nv04r4anl3mpmdv2bhzpk5fp939pczz606648x9v414ymaa4q89"; depends=[abind geomorph plot3D reshape2 seewave tuneR]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; + SoupX = derive2 { name="SoupX"; version="1.5.2"; sha256="1zhd2vx4g3kpxpfq996h909k4lybzb79nw1kvhx7073aniq042c3"; depends=[ggplot2 Matrix Seurat]; }; SourceSet = derive2 { name="SourceSet"; version="0.1.3"; sha256="159kg4pna24yihkghxc2k5f56dqk8aypxcmj1whgnajmgab29ry1"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; SoyNAM = derive2 { name="SoyNAM"; version="1.6.1"; sha256="1dgphlryw1810v93aq80p2c92aq6ccc25kabkgw4h1xinrpn263i"; depends=[lme4 NAM reshape2]; }; - SpATS = derive2 { name="SpATS"; version="1.0-12"; sha256="1lxaip002lg22y1x9d696f481nlx79p90wjzz3iipgzd6c6bvvsf"; depends=[data_table fields plot3Drgl spam]; }; + SpATS = derive2 { name="SpATS"; version="1.0-15"; sha256="1gcvn2c56hphrfffb8aw8611jai0mk88khj5vr7i5a4p5glsc8dx"; depends=[data_table fields plot3Drgl spam]; }; SpNMF = derive2 { name="SpNMF"; version="0.1.1"; sha256="1xybxx47i3ww5d7chwl38xc48fbsclgyxcki8h85c6dkm49dxy8i"; depends=[NMF]; }; SpNetPrep = derive2 { name="SpNetPrep"; version="1.2"; sha256="1jhjyrb0k5z21vn9bc444rxax3lxsyzyhggrcy7zl9ps7p4ra990"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; - SpaDES = derive2 { name="SpaDES"; version="2.0.6"; sha256="18z5xlh0frdli4sfrhicdhnzj027phwlk2df9sqbwyn66wbrv98g"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; - SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.2"; sha256="0z1n48kfwy460zfam88ayfiq8sbzvnf6cpkasr74nykr4fabs5ha"; depends=[devtools magrittr miniUI reproducible rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="1.0.6"; sha256="0qkqfn57nja7rj5abxav5hhrfjxvxalsiymmi6lnmm6dgy83h76y"; depends=[crayon data_table fastdigest igraph qs quickPlot raster reproducible Require whisker]; }; - SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.6"; sha256="1rfkdm0dnylpvmsv59vkwxlyq61znrskf43qpr3p8kl7jbkqw7v6"; depends=[backports checkmate CircStats data_table fastmatch fpCompare magrittr quickPlot raster Rcpp reproducible rgeos sp]; }; + SpaDES = derive2 { name="SpaDES"; version="2.0.7"; sha256="186qds86nnlcq754mk9xpnhr75rw0ifrldi2gzjqn5xa07byjqjv"; depends=[quickPlot reproducible SpaDES_core SpaDES_tools]; }; + SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.3"; sha256="0bhn9rj9p5rkcxz0pn2n1l3vij6khxhla0vgzrazh9f7s4hyyymp"; depends=[devtools magrittr miniUI reproducible rstudioapi shiny SpaDES_core stringi]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="1.0.8"; sha256="0lmydkm9x2kb8534x7hg9kazxzghlpnb8frcc1xrz996lyvcw2l1"; depends=[crayon data_table fastdigest igraph qs quickPlot raster reproducible Require whisker]; }; + SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.8"; sha256="1mxfab30yfrzrw2lyafp467pjjrky3q69aasqiqg93nlg7ckp7nz"; depends=[backports checkmate CircStats data_table fastmatch fpCompare magrittr quickPlot raster Rcpp reproducible Require rgeos sp]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0.1"; sha256="0w2jxaz2kxfksyss5vy6xy499p8jg8lpqlykwgm2srp1fd2l3rs9"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; SparseBiplots = derive2 { name="SparseBiplots"; version="4.0.0"; sha256="0cpibfj106is7k0wq8z21r110wpxpqs393ic9hxx5yx386z5rcav"; depends=[ggplot2 ggrepel gtable rlang sparsepca testthat]; }; @@ -4806,18 +4979,19 @@ in with self; { SparseTSCGM = derive2 { name="SparseTSCGM"; version="4.0"; sha256="01lfb3j907244hgapb85kba7zdmgzhw452gri208qgrjzfv2x9yh"; depends=[abind glasso huge longitudinal MASS mvtnorm network]; }; SpatEntropy = derive2 { name="SpatEntropy"; version="2.0-1"; sha256="1hr81babgml8mikpfkzk99xhpmxg36dxi9m7f22p23mhvg1xmn5i"; depends=[spatstat spatstat_core spatstat_geom spatstat_linnet]; }; SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-4"; sha256="09rkzfzg6nh4n7dizkqrz651kp617l2557c9qpxacspl3ngbm82i"; depends=[sp]; }; - SpatialBSS = derive2 { name="SpatialBSS"; version="0.9-0"; sha256="0id5mi8j80kn3s42ibbbsk4m76b48ir1h66y7ds5jck0xl4fndx2"; depends=[JADE Rcpp RcppArmadillo sp]; }; + SpatialBSS = derive2 { name="SpatialBSS"; version="0.11-0"; sha256="0z8h7wkw1a0fc3b65s352gxx91g415zca86y5kzsjfvdqf17xap6"; depends=[JADE Rcpp RcppArmadillo sp]; }; SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; }; - SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.3"; sha256="0d0kyh591m3hvalqpbj67pynpb9v00kdx1idc5mw4p9hsbfs10xm"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; }; + SpatialEpi = derive2 { name="SpatialEpi"; version="1.2.5"; sha256="1gzxalmp5h58dvc161wf4dmjzr6xnblgdj5s0iibwfgzd1bzh0s0"; depends=[maptools MASS Rcpp RcppArmadillo sp spdep]; }; SpatialEpiApp = derive2 { name="SpatialEpiApp"; version="0.3"; sha256="0svnnzqshk08s58ishy8xhqch44mb5svgfphkvpgysdd68dgaysr"; depends=[dplyr dygraphs ggplot2 htmlwidgets knitr leaflet mapproj maptools RColorBrewer rgdal rgeos rmarkdown shiny shinyjs SpatialEpi spdep xts]; }; SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-9"; sha256="1mhn1c8n3bmgf0fjyac3wji4790zswzkqliqcv3n8kv9806crb0y"; depends=[fields maps]; }; SpatialFloor = derive2 { name="SpatialFloor"; version="1.1.0"; sha256="07mwgcvkkq478l6wxvrdjs9d578x0kgs5xy86lgy5my0xqfcv6y8"; depends=[blocksdesign fields reshape2 taRifx]; }; SpatialGraph = derive2 { name="SpatialGraph"; version="1.0-2"; sha256="0cwswa5g3a6ng8qkwi04jz9pma4i0c16m7jpq6z3djzjin0znyk2"; depends=[igraph rgeos shape sp splancs]; }; SpatialKDE = derive2 { name="SpatialKDE"; version="0.6.2"; sha256="00gdx9jhfybxvfigsym122wfc72vks9bs4zlsij5wp9d1l3r0kfr"; depends=[dplyr glue magrittr raster Rcpp rlang sf vctrs]; }; + SpatialKWD = derive2 { name="SpatialKWD"; version="0.4.0"; sha256="0nsrf30bl3yc1h1kldv1ah1jjb4qh4hd99rd1nz9q9rqmdp0dcrw"; depends=[Rcpp]; }; SpatialML = derive2 { name="SpatialML"; version="0.1.3"; sha256="0akip0kkd1jjid12iwmaxkhkvcfzkxmrnrsv0b6nnvpjdl1jb589"; depends=[randomForest]; }; SpatialNP = derive2 { name="SpatialNP"; version="1.1-4"; sha256="1hj9fjhyxcvl2d0wdqyc899wy4f6iyi03g65icavkmqnwcs8c7hc"; depends=[]; }; SpatialPack = derive2 { name="SpatialPack"; version="0.3-8196"; sha256="0kbv4ddl8zdm5z8vi6cj0x59paf669js9vgm28d74yxrdmjy29wh"; depends=[fastmatrix]; }; - SpatialPosition = derive2 { name="SpatialPosition"; version="2.1.0"; sha256="0hl1xhihjsz7wfmia2qn65m6hkzafv616gficvfa5nclj5ll2dz7"; depends=[isoband raster sf sp]; }; + SpatialPosition = derive2 { name="SpatialPosition"; version="2.1.1"; sha256="0p2ii6pwxqrywp7m3hql2js9211vx6jk8lz76cbkzaz1i1g1q90k"; depends=[isoband raster sf sp]; }; SpatialRegimes = derive2 { name="SpatialRegimes"; version="0.2"; sha256="01kbfwzq58zcvclrnmb9n5y3n0ki9nr8zbxyyanzqn7xcng8qmnb"; depends=[GWmodel plm quantreg spdep]; }; SpatialRoMLE = derive2 { name="SpatialRoMLE"; version="0.1.0"; sha256="1m80vcd27g11v0gxnjz6p4ghljpxdb8jpkns8ry5yzhfvcpf29jc"; depends=[]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.4"; sha256="0jgbrzsx2klvihv65y1ycqyr8awp5kqqz4qwfyfibx3b56lzna1q"; depends=[Rcpp RcppArmadillo spBayes]; }; @@ -4832,22 +5006,26 @@ in with self; { SphereOptimize = derive2 { name="SphereOptimize"; version="0.1.1"; sha256="1b01jpj0sagi3hwfvgd346wvrcypv5b3hh0xfdd8qqnwjgkq8ixi"; depends=[]; }; SphericalCubature = derive2 { name="SphericalCubature"; version="1.5"; sha256="03j9f9v3zrykrd4lc74i19s3xyc0z3l2kg3056qg591sxw64h7vh"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; - Spillover = derive2 { name="Spillover"; version="0.1"; sha256="18vk1njd7bzrfic4s1kmnbafcjyrr7wv2lbnifmsafd5qphbx87x"; depends=[fastSOM vars zoo]; }; + SpiceFP = derive2 { name="SpiceFP"; version="0.1.0"; sha256="1ffvs1j8kbdxj4hs88fm1qnl7y5s40yvn4p8a2swpj9fl7r650bi"; depends=[doParallel foreach genlasso gplots Matrix purrr stringr tidyr]; }; + Spillover = derive2 { name="Spillover"; version="0.1.0.1"; sha256="0jwhih0jzd6grd9y967k7j5vwv9sd20xqi2270y1cgl64v21bjzm"; depends=[fastSOM vars zoo]; }; Splinets = derive2 { name="Splinets"; version="1.0.0"; sha256="1fws9svxvn03xgfqmqwr169wgl544zv87yrdi4nl5z32cq5c9yk5"; depends=[]; }; SplitGLM = derive2 { name="SplitGLM"; version="1.0.2"; sha256="0708jz8j44lw6zs5f6w4v9pf7apd22j15g7lszc8kwlm8xsnnkf6"; depends=[Rcpp RcppArmadillo]; }; + SplitKnockoff = derive2 { name="SplitKnockoff"; version="0.8"; sha256="1nmw9igjldq3fx7wahsxf3px8kz946vmii48g52kld651xm2ycaq"; depends=[ggplot2 glmnet latex2exp MASS Matrix mvtnorm RSpectra]; }; SplitReg = derive2 { name="SplitReg"; version="1.0.2"; sha256="1s012qldrsq8rpfpzf7kyd7631b65zai269x53xcaqn75r5ssh3f"; depends=[Rcpp RcppArmadillo]; }; SplitSoftening = derive2 { name="SplitSoftening"; version="2.0-1"; sha256="0jk46ymgkjh8jg9b9zzn9490cq92fzchvi2yzqiwisww0k15xlvb"; depends=[]; }; SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; + SportsTour = derive2 { name="SportsTour"; version="0.1.0"; sha256="06d66yv0b7c3mg1bcnrlg576njxgri107ni0vnl27hzf46fyidwa"; depends=[]; }; SpotSampling = derive2 { name="SpotSampling"; version="0.1.0"; sha256="0s47dvigzkcl9ynrdiwrjzwap18dpkb29jngi8ddvf9m4xywj4al"; depends=[BalancedSampling MASS pracma sampling WaveSampling]; }; - SqlRender = derive2 { name="SqlRender"; version="1.7.0"; sha256="1c6aac32xdn6y64h2v1wzsfhrcyz94by40pz6cjl5wj1r6vxx6yh"; depends=[rJava rlang]; }; - Sshaped = derive2 { name="Sshaped"; version="0.99"; sha256="1lj6dmawviqwf5k1ns93n7n8rzg6sjvpb73mcqam0cz1vhv8m9qk"; depends=[Rcpp RcppArmadillo]; }; + SqlRender = derive2 { name="SqlRender"; version="1.8.1"; sha256="1yar1pfdzk1x14x6x5l94ygvqh3gki77gwgnw6z6pn2kzzk367bf"; depends=[rJava rlang]; }; + Sshaped = derive2 { name="Sshaped"; version="1.0"; sha256="0zvbgn9hxp2a23g3q028k8ywrwkbzx17a3szvmbj0gcn3kcafvdi"; depends=[Rcpp RcppArmadillo]; }; Sstack = derive2 { name="Sstack"; version="1.0.1"; sha256="137vsas2kw3l37c141g51sgx0j6z8ys6hbxjmsdymz1fxsjr4adg"; depends=[doParallel dplyr foreach randomForest]; }; - StAMPP = derive2 { name="StAMPP"; version="1.6.2"; sha256="0mya2awp9invm0qiyvjr6g0h7gqwlmgkhrcpw0c6xfli0jvm1fs5"; depends=[adegenet doParallel foreach pegas]; }; + StAMPP = derive2 { name="StAMPP"; version="1.6.3"; sha256="0yqvy4yw9ccsbpjm6z1b9lh3435minfl7acnc1ha0zgiw8bvs2n2"; depends=[adegenet doParallel foreach pegas]; }; StMoMo = derive2 { name="StMoMo"; version="0.4.1"; sha256="1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; StMoSim = derive2 { name="StMoSim"; version="3.1.1"; sha256="1y4lnbpgdza6r6w3q161nlmg8775g3zv323amcwxcj41r4v41p96"; depends=[Rcpp RcppParallel]; }; StVAR = derive2 { name="StVAR"; version="1.1"; sha256="0wz5f5i9927fs1s8yczwqs022k912220m28l1sv5f0r081iv656i"; depends=[ADGofTest matlab MCMCpack numDeriv]; }; StabilizedRegression = derive2 { name="StabilizedRegression"; version="1.0"; sha256="11hfq13b5rc1jj832msrfb0f3fsklx4clp72aqxfccw0z0n8mdq0"; depends=[corpcor ggplot2 ggrepel glmnet MASS R6]; }; StableEstim = derive2 { name="StableEstim"; version="2.1"; sha256="0agi3bfp1xy5pfxxb9ib6xn434agmplgn7kg47nhbh47vf57vang"; depends=[fBasics MASS Matrix numDeriv stabledist testthat xtable]; }; + StackImpute = derive2 { name="StackImpute"; version="0.1.0"; sha256="07b83bql9ch3arxzv94mllb61d4sv20lvpixlpzi7k8cjdddqizd"; depends=[boot dplyr magrittr MASS mice sandwich zoo]; }; StakeholderAnalysis = derive2 { name="StakeholderAnalysis"; version="1.2"; sha256="164mah8h8izxaqp8hc43l6mlnf95pydkcx2laqrlqr9b0bybadxb"; depends=[]; }; StanHeaders = derive2 { name="StanHeaders"; version="2.21.0-7"; sha256="0srkyawyiykn3p5lw1z3zf18s4ax4iasv1ci3l1px40f9w36wm17"; depends=[RcppEigen RcppParallel]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; @@ -4859,25 +5037,26 @@ in with self; { StatMeasures = derive2 { name="StatMeasures"; version="1.0"; sha256="1bnbz803xx8kqhy1cx545b35si6f10za0mp5z82qfvd4kv9a9izz"; depends=[data_table]; }; StatPerMeCo = derive2 { name="StatPerMeCo"; version="0.1.0"; sha256="1nm6brlj6h7jx8nqagrfk294ay3pfmkiizabwlb87qfnsfwchpk3"; depends=[]; }; StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; }; + Statsomat = derive2 { name="Statsomat"; version="1.0"; sha256="02kqacq0zwapngbw42yqksrkjj0im55id3vx8j27j2wi62mmhpz8"; depends=[car corrplot data_table DDoutlier energy ggplot2 gridExtra kableExtra knitr readr reshape2 rmarkdown shiny shinydisconnect]; }; SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; }; SteinerNet = derive2 { name="SteinerNet"; version="3.1.0"; sha256="03wr746dkwp8vg91y986q0xvgz1y9b5q25g0kig2sx6m75li3yif"; depends=[igraph]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StempCens = derive2 { name="StempCens"; version="1.1.0"; sha256="0jphyikfggx0yj5f5k3fykf3fdv9msppymzpyin1m7xfmfi5cwia"; depends=[distances ggplot2 MCMCglmm mvtnorm Rcpp RcppArmadillo Rdpack tmvtnorm]; }; StepReg = derive2 { name="StepReg"; version="1.4.2"; sha256="0phabq5miri0zbbnmgb06k21z0kjrv9n88vfnaj4d0js7b973r9j"; depends=[Rcpp RcppEigen]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.6.0"; sha256="0j85lvs2bljfhf482r31sq3xgk8l73hcw22wgxxp8z8nla38cwf9"; depends=[Rcpp]; }; - SteppedPower = derive2 { name="SteppedPower"; version="0.1.0"; sha256="186nl1h7ib7dhfghxvq0nr7sbca3423wlna4ibn32l7i13bqydlh"; depends=[Matrix plotly]; }; + SteppedPower = derive2 { name="SteppedPower"; version="0.2.0"; sha256="0jrpqzyc20hnjyn6kh6hh2gliw84m7p7bpim7lqmvi2wp4sc36si"; depends=[Matrix plotly]; }; StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; - StereoMorph = derive2 { name="StereoMorph"; version="1.6.3"; sha256="0sr8i6hq9iir2f717yvm5kdda047hamsqcrl553jjzzcbxg0y5m1"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; + StereoMorph = derive2 { name="StereoMorph"; version="1.6.4"; sha256="1xmqggisdyww0gpkgbv3dml1jik0crm3ia9q1952gx4fa8iiqd82"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; }; StratSel = derive2 { name="StratSel"; version="1.3"; sha256="0hd6q8s8aiymcd33kv0gd0a4wzr86xxdzwn18jgpyk9q8pmg8gvl"; depends=[Formula MASS memisc mnormt pbivnorm]; }; Strategy = derive2 { name="Strategy"; version="1.0.1"; sha256="0phja1r0qfvcswvw5w1x6ny86p84wkqb029fdqgw10djdm9xp0f2"; depends=[xts zoo]; }; StrathE2E2 = derive2 { name="StrathE2E2"; version="3.3.0"; sha256="10y6bagqg1h57c8g7m837qidrf7wdf8r0jcgqwrcgkr1kbxywfg9"; depends=[deSolve NetIndices]; }; StratifiedBalancing = derive2 { name="StratifiedBalancing"; version="0.3.0"; sha256="0pklnm0q0imdhyzhwyb4i0j441dkk4k6qqlx8d4q2xnl62drqnvv"; depends=[bnlearn plyr]; }; - StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="1.0.3"; sha256="0g9pgv2kmfzdb5caqhc4bylyvmrw1h82f5yaws2in7lyb9k527m0"; depends=[dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; + StratifiedMedicine = derive2 { name="StratifiedMedicine"; version="1.0.4"; sha256="0143lkzywlaqfwrxd9m72p20rfnavr7cn8a8m96zvgwa68jdwm8l"; depends=[coin dplyr ggparty ggplot2 glmnet mvtnorm partykit ranger survival]; }; StratifiedRF = derive2 { name="StratifiedRF"; version="0.2.2"; sha256="0a5djia6xacs17nnr5knr1acwzicrffz73q9nvnhdmihazq8v27d"; depends=[C50 dplyr]; }; - StratifiedSampling = derive2 { name="StratifiedSampling"; version="0.1.0"; sha256="1pm2s6959xrmrq0qrajz9mkqicca50ja6fb2n6znlcfccgq9g8ha"; depends=[Matrix Rcpp RcppArmadillo]; }; - StratigrapheR = derive2 { name="StratigrapheR"; version="1.2.1"; sha256="1sxac5j1ihfsjazrmzjzilgh338cln0mk7j27f8qqpsxqk8zs0zh"; depends=[diagram dplyr reshape shiny stringr XML]; }; + StratifiedSampling = derive2 { name="StratifiedSampling"; version="0.3.0"; sha256="190drdcry26rq63i4lzm5s3x79jjjqsngmxgyxwbfgz8hbqj85jx"; depends=[MASS Matrix proxy Rcpp RcppArmadillo sampling transport]; }; + StratigrapheR = derive2 { name="StratigrapheR"; version="1.2.4"; sha256="00m0ag5va8r7aq6j2766cv4596qbgjgcfljkbq7vm0p4hx78x51x"; depends=[diagram dplyr reshape shiny stringr XML]; }; StreamMetabolism = derive2 { name="StreamMetabolism"; version="1.1.2"; sha256="1sv30i7armk7jhxg5x9lh0r9qq3xixn1k2h0q89halkh1yraal8a"; depends=[chron maptools zoo]; }; StressStrength = derive2 { name="StressStrength"; version="1.0.2"; sha256="1fq26bzmwsk4nzz9bgasyxz9alw8x2ssahz67mham7vw483w79pd"; depends=[]; }; String2AdjMatrix = derive2 { name="String2AdjMatrix"; version="0.1.0"; sha256="058r30kjjna02nmd6ngqfcnn1yk5390i20xvl6qb5qk3bcp2wmxn"; depends=[stringr]; }; @@ -4885,12 +5064,12 @@ in with self; { StructFDR = derive2 { name="StructFDR"; version="1.3"; sha256="1y0wj7y36iq0lznc4qpsr2yis3an34iilpabkaxxmas2q4abg0qb"; depends=[ape cluster dirmult matrixStats nlme]; }; StructureMC = derive2 { name="StructureMC"; version="1.0"; sha256="1pj3inznw6flvmk22dzjcfjnwjhx7r98ngckz0axf6ipp3hb85jn"; depends=[MASS matrixcalc]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; - SubTite = derive2 { name="SubTite"; version="4.0.1"; sha256="1nb7wig34xf8wq50s9i2zs5ymd0z782lh39rp165wi6c62nj36rz"; depends=[Rcpp RcppArmadillo]; }; + SubTite = derive2 { name="SubTite"; version="4.0.5"; sha256="13fh24w7nvx5xqb0yvn8cackj576dspnrszdqv1gd0i3irzlyqya"; depends=[Rcpp RcppArmadillo]; }; SubVis = derive2 { name="SubVis"; version="2.0.2"; sha256="1nb3zgm6i5lwfwdrn8mk3wkg8a4ldfvs27ai8v46l4316qc1fa9p"; depends=[Biostrings shiny]; }; SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.3"; sha256="1bi5zndkpgvyk563i0jdfrw73kkpa6zi3yx922dv90w6bdb9kvl2"; depends=[alluvial circlize colorspace diagram dplyr ggplot2 ggrepel gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; - SubtypeDrug = derive2 { name="SubtypeDrug"; version="0.1.4"; sha256="07wf07y1q4v0838lf97vlsr9zygdkycqcd1ms1alr4gjmsi2q7kf"; depends=[BiocGenerics ChemmineR devtools GSVA igraph pheatmap rvest xml2]; }; + SubtypeDrug = derive2 { name="SubtypeDrug"; version="0.1.5"; sha256="1f1kx5lw2f1pch3805p58r89mkckcwna6vihagjrdcdc9xln48vb"; depends=[BiocGenerics ChemmineR GSVA igraph pheatmap rvest xml2]; }; SuessR = derive2 { name="SuessR"; version="0.1.3"; sha256="1733hxhp9ia6lp74ykqr3x7rynxh7nrqym1w41hcy19rs48bv945"; depends=[]; }; SummaryLasso = derive2 { name="SummaryLasso"; version="1.2.1"; sha256="1gb1g1xgda5psq93vy50yfr0cbhvymliblpkxz7ck1nwpp65n9py"; depends=[gtools]; }; Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; }; @@ -4900,30 +5079,31 @@ in with self; { SupMZ = derive2 { name="SupMZ"; version="0.2.0"; sha256="1n81wqacrpk5x6i1pd1zsjivv2jk41743kg1h7gnp0rb3k58vp7r"; depends=[dplyr magrittr]; }; SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.7"; sha256="1ysfsdzbkldcn7hzxhqikf5h2h9747xhfrirqgr8xx8q81wq989s"; depends=[]; }; SuperGauss = derive2 { name="SuperGauss"; version="2.0.1"; sha256="1v7bva9a4cjjaf924bj02421sk85hmirijrpcpayhyyjr65jscqh"; depends=[fftw R6 Rcpp RcppEigen]; }; - SuperLearner = derive2 { name="SuperLearner"; version="2.0-26"; sha256="10b0fh71ky92mp0ydi81s6zm3sn47k5agppcg4zpgqmailn94qj4"; depends=[cvAUC nnls]; }; - SuperPCA = derive2 { name="SuperPCA"; version="0.3.0"; sha256="139nym0szr7l7hq3xy60jwpx61896h5g7vrklxy7098w53iczyj4"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; + SuperLearner = derive2 { name="SuperLearner"; version="2.0-28"; sha256="00any24msgflyagy87nznpfjz5g9v15frqda6c679wa8plx26hjz"; depends=[cvAUC gam nnls]; }; + SuperPCA = derive2 { name="SuperPCA"; version="0.4.0"; sha256="0bpcxg9rh3ig5fzml026glws13daf5hiqbvdy7hsriv8y8qlxnfk"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; SuperRanker = derive2 { name="SuperRanker"; version="1.2.0"; sha256="01wilk3cy33z50yhg4i4gci298fj8s4xbrkb7k3i9gn8q13vviin"; depends=[prodlim Rcpp]; }; SuperpixelImageSegmentation = derive2 { name="SuperpixelImageSegmentation"; version="1.0.4"; sha256="0s6cizdxbv56sn2cijl7sdnvk4cpkmndmv01v4kvh1lwcfq8zz76"; depends=[ClusterR lattice OpenImageR R6 Rcpp RcppArmadillo]; }; - Superpower = derive2 { name="Superpower"; version="0.1.1"; sha256="1ihyn3p1r0h7v48qdkl1jwqhsqyvz4sgph77y2192jj1js0x36rn"; depends=[afex dplyr emmeans ggplot2 gridExtra Hmisc magrittr MASS mvtnorm reshape2 tidyr tidyselect]; }; + Superpower = derive2 { name="Superpower"; version="0.1.2"; sha256="0nas4mha5m2vk210g52pk5n1y4vy3pzmbxysmkvjl0slwavi9gsi"; depends=[afex dplyr emmeans ggplot2 gridExtra Hmisc magrittr MASS mvtnorm reshape2 tidyr tidyselect]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.5"; sha256="1i3iq12a5x5k49ac01mikzcrrq9gc148xq3m08h4xm07bha6f2v8"; depends=[]; }; SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="1.0.2"; sha256="1l586x9np5rclqdrnv8b72ixlppzlnsq4yf99ny6aq5a9lwzmcgm"; depends=[gstat raster rgeos sp]; }; - Surrogate = derive2 { name="Surrogate"; version="1.8"; sha256="0kqcij8bxh15ajqlcv6j8zx8c9p5yn0w94i06f0f4b3mpqw3vjik"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rms rootSolve survival]; }; + Surrogate = derive2 { name="Surrogate"; version="1.9"; sha256="0sfb7dylphc88h38p2i3b2xngf1r217lfwhaswsv57y5vifmx2x2"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rms rootSolve survival]; }; SurrogateOutcome = derive2 { name="SurrogateOutcome"; version="1.0"; sha256="0x91bmr4n9zn9cc72s91fzzsqhzhrkfpcbcla00gcsfmbjqz3997"; depends=[survival]; }; SurrogateRegression = derive2 { name="SurrogateRegression"; version="0.5.0"; sha256="06xdkg75fs1ymq5x20k5wnv6rji13rk049pm11b686wjvwycrsg7"; depends=[mvnfast plyr Rcpp RcppArmadillo]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.2"; sha256="0wkyz9qkmvsrhvdga6w0qkbgqr7kr0yh04kkc19824sqnx452dc5"; depends=[survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; SurvDisc = derive2 { name="SurvDisc"; version="0.1.1"; sha256="0ajvnm0a4krbm0m584bg58hd7dzl0f2rz5as1zsajx8agywb5qmv"; depends=[cubature MASS mvtnorm nlme simex survival]; }; SurvGSD = derive2 { name="SurvGSD"; version="1.0.0"; sha256="0aa5zaf9akkqkxs8iqwnm93sfwakhhhs3qfafbk0vrwmb5yvzzm1"; depends=[flexsurv ldbounds mnormt]; }; - SurvHiDim = derive2 { name="SurvHiDim"; version="0.1.0"; sha256="0v8gx3d0lc2qpdgy507idbxzzq9yccwr4p4c76h4zxmv2d19a0gd"; depends=[factoextra glmnet igraph Rdpack readr survival tidyverse useful]; }; + SurvHiDim = derive2 { name="SurvHiDim"; version="0.1.1"; sha256="1kix00zfrbx11pwx2dfag8vz5nvf8siw2kbxi8g4fb7xib9wh2na"; depends=[factoextra glmnet igraph Rdpack readr survival tidyverse useful]; }; SurvLong = derive2 { name="SurvLong"; version="1.1"; sha256="1lkbz5wa6ggwvg2aq13bc4hm6lqsj3wal5c33kamnrg9pk2cssj8"; depends=[]; }; SurvMI = derive2 { name="SurvMI"; version="0.1.0"; sha256="0qgsgz11vz73v83bkxrrjwk7i26rllkxk97if3nw2rgl9jnmiih0"; depends=[survival zoo]; }; + SurvMetrics = derive2 { name="SurvMetrics"; version="0.3.5"; sha256="06wzzg20p7nmnmbkzkh3xs82g328ad1cws1jqywsv0mzd2a3wcvx"; depends=[MASS survival survminer]; }; SurvRegCensCov = derive2 { name="SurvRegCensCov"; version="1.4"; sha256="0ipr7lajnrklk963lrlgx946l6r191q3bfif4njkdmw0x797nzm2"; depends=[numDeriv survival]; }; SurvTrunc = derive2 { name="SurvTrunc"; version="0.1.0"; sha256="0b6s7llljp75agd57lmc1yq5acnfwy113khrfjcbm1l5ply6pz7f"; depends=[survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; - SurviMChd = derive2 { name="SurviMChd"; version="0.1.0"; sha256="0q4x6yj5rc3b0asakxmy4vydgi1yafz17vvdr3c3chjyskhfip72"; depends=[dplyr ICBayes icenReg R2OpenBUGS Rdpack readr rlang survival tidyverse]; }; + SurviMChd = derive2 { name="SurviMChd"; version="0.1.1"; sha256="1sj3i950nmam3r70as85kdx6nd88iidb5jpiz2a5a39i5lb7mgf7"; depends=[dplyr ICBayes icenReg R2jags Rdpack readr rjags rlang survival tidyverse]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-6"; sha256="09xq7jx70qjyhblzh6kc40hdr0636rqqdnbka7m6rawhd8ivp8yz"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; - SwimmeR = derive2 { name="SwimmeR"; version="0.9.0"; sha256="1hyb861sblxamn6whz0l50z1zmzvy6i0pn57h664ivrxwq1fz21f"; depends=[dplyr magrittr pdftools purrr readr rvest stringr tibble xml2]; }; + SwimmeR = derive2 { name="SwimmeR"; version="0.12.0"; sha256="18chwlvdk6yiajabqia5wwhmckqrys9fbvynhrpqsmji5471rlfw"; depends=[dplyr magrittr pdftools purrr readr rvest stringr xml2]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.5"; sha256="0lh69924vhyilgn562jqn8m7z4dq3xmdj09501sbs7hbxfaiiyly"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SyScSelection = derive2 { name="SyScSelection"; version="1.0.2"; sha256="16zx507hlzhdxbh6gzndbgmzpyp6vc59h441l4gv8lx58zi9kyjd"; depends=[pracma]; }; @@ -4933,15 +5113,16 @@ in with self; { SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; - SynthETIC = derive2 { name="SynthETIC"; version="1.0.0"; sha256="0xjfl5fjsbmjgclbynf1z7zknnf0wyr18i8da46qp3j8s4lbznfk"; depends=[ggplot2 magrittr rlang]; }; + SynthCast = derive2 { name="SynthCast"; version="0.2.0"; sha256="1jw6w32cdi1nyr1ljswylci39mp74i0i7ix75j44dghvql9a99rn"; depends=[dplyr forcats Synth tidyr]; }; + SynthETIC = derive2 { name="SynthETIC"; version="1.0.2"; sha256="1z7jyal707a93hv0fsgnkxpnywqw6ksifk0546alzm32g5lp4655"; depends=[ggplot2 magrittr rlang]; }; SynthTools = derive2 { name="SynthTools"; version="1.0.1"; sha256="19vasz3nnm5vgwqs6g2a5bibmk44br1bxga5zavsx938x3jw9gnd"; depends=[dplyr magrittr Rdpack]; }; SystemicR = derive2 { name="SystemicR"; version="0.1.0"; sha256="1vk08w734zxvrwzd81iy0azwcj53k6wvgc1qlaxw96hirdwdg6zr"; depends=[igraph Matrix quantreg xts]; }; T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; - T4cluster = derive2 { name="T4cluster"; version="0.1.1"; sha256="0f2s6y6n9z9ikiacn67kypmqzfzlg985qbjz5icmq0g7rcdqqlgb"; depends=[ADMM fda ggplot2 lpSolve maotai MASS mclustcomp Rcpp RcppArmadillo Rdimtools Rdpack rstiefel scatterplot3d]; }; + T4cluster = derive2 { name="T4cluster"; version="0.1.2"; sha256="0wai4qgpkwc1p5wwpvi0z6zrcj9ha1wiy27qjpcfvfa2bhaid2w5"; depends=[ADMM fda ggplot2 lpSolve maotai MASS mclustcomp Rcpp RcppArmadillo Rdimtools Rdpack rstiefel scatterplot3d]; }; T4transport = derive2 { name="T4transport"; version="0.1.0"; sha256="0cp2881j6qyzh1yl23f2layhldsgdy7ic7c8c4hydfv7c7qkkg3d"; depends=[lpSolve Rcpp RcppArmadillo Rdpack]; }; TAF = derive2 { name="TAF"; version="4.0.0"; sha256="0v796lrfb2n2m74vdgm9f1gm9c8xc780d09rgwfdcc4q3nr3gld8"; depends=[lattice]; }; - TAG = derive2 { name="TAG"; version="0.2.1"; sha256="1sr24mi7s7z155xzs0aki21ywcq10gjc93nra2x6pfm20ymlyndl"; depends=[DiceKriging FastGP foreach Matrix mgcv mlegp randtoolbox Rcpp RcppArmadillo]; }; - TAM = derive2 { name="TAM"; version="3.6-45"; sha256="1i9frqh6xf7h8r3q66xy0kfgwsxdhj6p9r9ga043aqmwk92q78b8"; depends=[CDM Rcpp RcppArmadillo]; }; + TAG = derive2 { name="TAG"; version="0.5.1"; sha256="1hni3ay1pg4gy3gm3sn3bcr8m3z2vlc5ivg7bmkzpxqdkl0w01h2"; depends=[DiceKriging FastGP foreach Matrix mgcv mlegp randtoolbox Rcpp RcppArmadillo]; }; + TAM = derive2 { name="TAM"; version="3.7-16"; sha256="1969xm1f7s183h0xnd4g1bxhjp80rl7kad29zwcig0fmw6bs2mpd"; depends=[CDM Rcpp RcppArmadillo]; }; TANDEM = derive2 { name="TANDEM"; version="1.0.3"; sha256="151rm95q2naw9y58df1lr2qiadnkgfb5j9v47v41bw4iipsmlp4p"; depends=[glmnet Matrix]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2018.5-1"; sha256="0bf0sgqa53l9y2bhwg2ngiwlcgrmj0nvxchlsmcc8zin388qf4pb"; depends=[Rcpp]; }; TAR = derive2 { name="TAR"; version="1.0"; sha256="0wjh2n9x3yn9by9a6mjvkl96qy7z549g6dsqp7b4d96xwmyqxlbv"; depends=[mvtnorm]; }; @@ -4955,7 +5136,7 @@ in with self; { TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.6"; sha256="15f3w6vhbqy4xzidxasjnqigxchd3jbr2kpm3gggjnkp7rzsfgaf"; depends=[httr jsonlite]; }; TCIU = derive2 { name="TCIU"; version="1.2.0"; sha256="0cyagbvcb8x1bszwq8id75838n53l1kcdah7hhm679j2wm4i487s"; depends=[AnalyzeFMRI cubature doParallel dplyr DT extraDistr fancycut fmri foreach forecast geometry ggplot2 ggpubr gridExtra ICSNP MultiwayRegression plotly pracma RColorBrewer reshape2 rrcov scales spatstat_core spatstat_geom tidyr zoo]; }; TDA = derive2 { name="TDA"; version="1.7.7"; sha256="1vrpqzswhjwqc4rsvapzfd92cmkvnibibiiac44i8ic50nryw00j"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; - TDAkit = derive2 { name="TDAkit"; version="0.1.0"; sha256="0qjmxvf2flkqphd7nh5sfsa60sga7fdvvz2gspjbk7rrs46n7ayn"; depends=[energy ggplot2 maotai Rcpp RcppArmadillo Rdpack TDAstats]; }; + TDAkit = derive2 { name="TDAkit"; version="0.1.2"; sha256="1gvcv3016kjk98qm07i972fi66bcljj1avmagyc8qxs29cq3ngg3"; depends=[energy ggplot2 maotai Rcpp RcppArmadillo Rdpack T4cluster TDAstats]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDAstats = derive2 { name="TDAstats"; version="0.4.1"; sha256="1zmickqk60vm9rzy67hib835v3c45aqjk441p31vpbvhbiy58nq5"; depends=[ggplot2 Rcpp]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; @@ -4976,14 +5157,16 @@ in with self; { TGS = derive2 { name="TGS"; version="1.0.1"; sha256="01mwdlgfjlxy0q5lxcmzk6lsb806987va7yag0zpjjd2bzmdh70k"; depends=[bnstruct doParallel foreach ggm minet rjson]; }; TGST = derive2 { name="TGST"; version="1.0"; sha256="1xnb41ksggdi57gnkjaab98c4nfdkxqx53rv9pyh3j0cg0kbkk9v"; depends=[ggplot2 knitr]; }; TH_data = derive2 { name="TH.data"; version="1.0-10"; sha256="0mgz7aj2d9abbmdr65zgmg1ddp3fdbs3mfj83r5xadh5ldkir2k1"; depends=[MASS survival]; }; + TIGERr = derive2 { name="TIGERr"; version="0.1.0"; sha256="1m9hbiflg6m7nvqklsnm027c4spspda1xmb69667nlnw0yvksqnm"; depends=[caret pbapply ppcor randomForest]; }; TIMP = derive2 { name="TIMP"; version="1.13.2"; sha256="1y1bc6wsd32792apsc6qncxbw5y8ww9xlhy9v49mhwbffgzn6llg"; depends=[colorspace deSolve fields gclus gplots minpack_lm nnls]; }; TITAN2 = derive2 { name="TITAN2"; version="2.4.1"; sha256="16zf42s1as2xrvyhd0lnv36mgnr5w19xv11pkl0k8imb5bdkhxa2"; depends=[cowplot dplyr ggplot2 ggridges glue purrr snow tibble]; }; TInPosition = derive2 { name="TInPosition"; version="0.13.6.1"; sha256="1c0h9zg71whmsjn5rnzv5kdrabl9kqrq627caznvrpa74c7pjks9"; depends=[ExPosition InPosition prettyGraphs TExPosition]; }; TKCat = derive2 { name="TKCat"; version="0.5.4"; sha256="061xdb5gqdxik3wwp9daz3kj9kjd77dzq7h5q883nqdlg4gzksp3"; depends=[base64enc DBI dplyr DT future getPass jsonlite jsonvalidate magrittr markdown promises RClickhouse readr ReDaMoR rlang shiny shinydashboard tidyselect visNetwork]; }; TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; TLMoments = derive2 { name="TLMoments"; version="0.7.5.2"; sha256="0l9d4yafkkn3qdg9ypy3fiqnzxzv8yzxkq6mh1j28g94s4h6lybh"; depends=[ggplot2 hypergeo lmomco Rcpp]; }; - TMB = derive2 { name="TMB"; version="1.7.20"; sha256="14wapc8bicr4j7mmrv1hrsw407lsbr7l4cfvy3j9sfjdbrq31a37"; depends=[Matrix RcppEigen]; }; + TMB = derive2 { name="TMB"; version="1.7.21"; sha256="1lf9vf28l48xhw2irxfxl4vsqzj7skzblydw32p18zddzpapl0z9"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.1"; sha256="062n9mi2f9g2xxpnymja57xnpl855d8mwyfwci7a8cq4c7w7avj7"; depends=[httr jsonlite stringi]; }; + TMTI = derive2 { name="TMTI"; version="0.1.0"; sha256="16fa512f8hhfsinn57p98yvw58hjymki7xnvrfz9fidkqva0wm1x"; depends=[dplyr]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; TNRS = derive2 { name="TNRS"; version="0.1.0"; sha256="146shb1dg4iyaanrdr1l8nqpiqf05la1ai34w74z6wsd1mpcchqy"; depends=[jsonlite RCurl rjson]; }; TOC = derive2 { name="TOC"; version="0.0-5"; sha256="0zk6j1yc4gpvkswnfrlyfvqc69wr4q3ys59y7v03fhzwasqj0an2"; depends=[bit raster rgdal]; }; @@ -4999,9 +5182,9 @@ in with self; { TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; TRAMPR = derive2 { name="TRAMPR"; version="1.0-9"; sha256="16fbzp6b6y25k9h7m4qpmbgj10przywm2rh8kvw8a8p0xkskc9k5"; depends=[]; }; TRD = derive2 { name="TRD"; version="1.1"; sha256="0bhn4bcrq39f5dgqc74jqsfhs1iqfxhawacqqyncbk2372013nqp"; depends=[Rlab]; }; - TRES = derive2 { name="TRES"; version="1.1.3"; sha256="104nxscgihmlblypy576h8z6vwspvcbv40miilh5n52ab0hmk5b6"; depends=[ManifoldOptim MASS pracma rTensor]; }; + TRES = derive2 { name="TRES"; version="1.1.4"; sha256="0qrir7sshycc02cmj7qh9glsd1hdw10x25d8lcww1x2fhkxwyphq"; depends=[ManifoldOptim MASS pracma rTensor]; }; TREXr = derive2 { name="TREXr"; version="1.0.0"; sha256="1dkp3l5cix06bhidmr9npd2f2my9hcm0qmdar0hwkcm1zrl1ha4w"; depends=[boot chron doParallel doSNOW dplyr foreach lhs lubridate magrittr msm randtoolbox sensitivity solaR tibble zoo]; }; - TRMF = derive2 { name="TRMF"; version="0.0.2"; sha256="13c1kzxnp9xpq12nk04s0fkl0nfyi018709ssg45xfacvfb5zvpw"; depends=[generics limSolve Matrix]; }; + TRMF = derive2 { name="TRMF"; version="0.1.5"; sha256="0zi9v7jgvpcdfjs7pbcfb8ggf89w71zvxmlsr319r1d4spkrskfx"; depends=[generics limSolve Matrix]; }; TSA = derive2 { name="TSA"; version="1.3"; sha256="1bv5q609lhmrcxnjnvcj497fbjlv89zwa8q918hw4iki5nkvwwdb"; depends=[leaps locfit mgcv tseries]; }; TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; }; TSDFGS = derive2 { name="TSDFGS"; version="1.0"; sha256="1wk1j0bzcapp2pknhiichh947xs6dpkrfr2h7s1vqyzb9a0yajif"; depends=[Rcpp RcppEigen]; }; @@ -5012,6 +5195,7 @@ in with self; { TSEtools = derive2 { name="TSEtools"; version="0.2.1"; sha256="1f2rs3mkypnl9bjjqaaggj6g8kr2rmk12934fbhxcdz2vmlqxpga"; depends=[quadprog quantmod xts]; }; TSEwgt = derive2 { name="TSEwgt"; version="0.1.0"; sha256="0j14vja4r4qvw4f94461adi1g4igx9c0az20z6bkbkkhp79xi62l"; depends=[]; }; TSF = derive2 { name="TSF"; version="0.1.1"; sha256="0v3pq64yknp3n6lw6c87slv1avsv7rlb82gm670q4jzv5d174phv"; depends=[forecast fracdiff]; }; + TSGS = derive2 { name="TSGS"; version="1.0"; sha256="0lsl6lmyg57bbw0pm22clxvzgwz44r8pizjqn1g67c76vmrsgpd4"; depends=[caret e1071 edgeR fastmatch genalg kernlab]; }; TSGSIS = derive2 { name="TSGSIS"; version="0.1"; sha256="0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n"; depends=[glmnet MASS]; }; TSHRC = derive2 { name="TSHRC"; version="0.1-6"; sha256="13x5l0y0nh972p39s32dv8byds19g8265s2mphbrzz1v59aq0xk3"; depends=[]; }; TSMCP = derive2 { name="TSMCP"; version="1.0"; sha256="1wzi6wzd8l5bkm0qc1mfvj067xywm208xl6r87a4svcn1ydr4vl4"; depends=[lars plus]; }; @@ -5042,7 +5226,7 @@ in with self; { TSsmoothing = derive2 { name="TSsmoothing"; version="0.1.0"; sha256="1m4y6hfw5ghqmvbnha05w6k0abbr08xdcahmh897g68b06vcrjsl"; depends=[ggplot2 gridExtra MASS Matrix]; }; TSsql = derive2 { name="TSsql"; version="2017.4-1"; sha256="0f71q6gqfx4r3ghsmr572cvkpmf2xf7kipf10ii99z1y23dxmsdn"; depends=[DBI tframe tframePlus TSdbi zoo]; }; TSstudio = derive2 { name="TSstudio"; version="0.1.6"; sha256="1r45s4xgc9a2rdh225xzmwr7g6qahmjj7v1a6g7haghnhaq6hv4s"; depends=[data_table dplyr forecast forecastHybrid future future_apply lubridate magrittr plotly purrr RColorBrewer reshape2 scales tidyr tsibble viridis xts zoo]; }; - TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.6"; sha256="1jkjivfg0k6rd6dn1apxyqdwzkxwvkg8zsm4hd6vlrk98ph9d1h3"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape rkt stlplus tcltk2 zoo]; }; + TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.7"; sha256="18f5pxjdcmii95l6yw0p7fbvaj92cj46bmvsgbiin8vk3h3cmisr"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape rkt stlplus tcltk2 zoo]; }; TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; }; TTR = derive2 { name="TTR"; version="0.24.2"; sha256="06vicgbhwpsww09hhha5mbcd0cwip6cvkfbhjjhp950rv64bk1r5"; depends=[curl xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; @@ -5055,6 +5239,7 @@ in with self; { TableHC = derive2 { name="TableHC"; version="0.1.2"; sha256="1il86xjc4h1sdq3gpi4s7xbkcgzpgfqy5ivzjdkbq45d06pssk21"; depends=[]; }; TableMonster = derive2 { name="TableMonster"; version="1.7"; sha256="1xa4bkcpzhm50dwbpya346swjjfw46n2x26xm30p8gppilg5c0lb"; depends=[xtable]; }; TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.2"; sha256="034vca0il7006zdkh5vdfjddyq9lg5mkl8hjria2rpks6wx0jhrd"; depends=[]; }; + TailClassifier = derive2 { name="TailClassifier"; version="0.1.0"; sha256="1m9a2x837v6s7gsv8g5ll6s2h1lk0jjfig2qvkqzg97xp7v9b8in"; depends=[readr]; }; TailRank = derive2 { name="TailRank"; version="3.2.1"; sha256="142m0cq9j8y5g9wh4plxya1jqi0dv6p6praxx3jb84kwqspi91xr"; depends=[Biobase oompaBase oompaData]; }; TanB = derive2 { name="TanB"; version="0.1"; sha256="05y9j1a5nzqfpsw48gix5c4ds1cm80liad9wnwmddhbx4fda6p32"; depends=[fdrtool pracma]; }; TangPoemR = derive2 { name="TangPoemR"; version="0.1.0"; sha256="06w5gg36mx0vdagkhy7rskgjv2d3irr0d3nkjw26vxp25x1py4sf"; depends=[jiebaR]; }; @@ -5064,7 +5249,7 @@ in with self; { TauP_R = derive2 { name="TauP.R"; version="1.5"; sha256="02vk9rj8yx4n2pihgk93bs2f9wkpkyfqm2kp7ixj4wpa29a0iq6v"; depends=[]; }; TauStar = derive2 { name="TauStar"; version="1.1.4"; sha256="06bb6570mqzfbjw2qp4bjl4a1bdpwsvcr0vw2y4l1x444m670ds1"; depends=[Rcpp RcppArmadillo]; }; TaxicabCA = derive2 { name="TaxicabCA"; version="0.1.1"; sha256="0izjf6vrdjvs9axvafr2mamr157i8w6d7m5sfjch1p5c174cpr9c"; depends=[]; }; - Taxonstand = derive2 { name="Taxonstand"; version="2.3"; sha256="17hqjxbwggvs6lilkcnzgyy24winhh17cxmrk7jhjkrmmwk86m5v"; depends=[pbapply]; }; + Taxonstand = derive2 { name="Taxonstand"; version="2.4"; sha256="0zph4618bwjfvx41ap9d2534kknbni216y90nmcvaniskw4ixm7d"; depends=[pbapply]; }; TcGSA = derive2 { name="TcGSA"; version="0.12.7"; sha256="0l28sldpavyvhm9hab9gb7i7rmlxpj7ivffi6xx8lg7qjn6d21v5"; depends=[cluster cowplot ggplot2 GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; TeXCheckR = derive2 { name="TeXCheckR"; version="0.7.0"; sha256="0r85yhk3p4ibkzkbjm7j9zpryp1dhajbmaqyfwr4bv1zh29smrxa"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; @@ -5074,14 +5259,15 @@ in with self; { TeachingSampling = derive2 { name="TeachingSampling"; version="4.1.1"; sha256="02nywwmv0r8md00kra7wxwzvm6p51l4p8la51bxh8sqq8ajsdswh"; depends=[dplyr magrittr]; }; Tejapi = derive2 { name="Tejapi"; version="1.0.1"; sha256="1v80yjbik6shqad2nvi374dpzs9bjv9ah26agy0khmwnbz6029rk"; depends=[httr jsonlite]; }; TempCont = derive2 { name="TempCont"; version="0.1.0"; sha256="1pl0czrpw74zfm5vycyl0h8hc3n5whf4g6a2759a22384gk5fq7k"; depends=[nlme]; }; - Temporal = derive2 { name="Temporal"; version="0.2.0"; sha256="114ld41l2dipw7cpyh7fy3n332v1dkiqvdng6vkk9wm6jmda7wya"; depends=[expint numDeriv plyr Rcpp RcppArmadillo]; }; + Temporal = derive2 { name="Temporal"; version="0.3.0"; sha256="1f1gp7zqaa2phv9rik6nmlj4dcqlm7z9s6y5iify3v6vai9sky72"; depends=[dplyr expint numDeriv tidyr]; }; Tendril = derive2 { name="Tendril"; version="2.0.4"; sha256="1wvczfklsccs8jd081vb6d6h7i35lhf6na925fm7wq8ars0b23wd"; depends=[dplyr ggplot2 magrittr plotly plyr reshape2 scales]; }; - TensorClustering = derive2 { name="TensorClustering"; version="1.0.1"; sha256="0zw41h07kxrm6rdvpp5p11bwjqjx9iwldv5lk0yplivkvnnrdpxy"; depends=[abind combinat MASS mvtnorm pracma Rcpp rTensor tensr TRES]; }; - TensorTest2D = derive2 { name="TensorTest2D"; version="1.0.2"; sha256="0jjdcfl4fq74qn9vjj23lpk2k5qvmf1hmc3bgly36kf1625wvp8q"; depends=[]; }; - Ternary = derive2 { name="Ternary"; version="1.2.1"; sha256="0jbzvxl9pqqw84a3vbgq4sq7m0izxh6zmc3x2d1qxyk11fvbvwxn"; depends=[shiny viridisLite]; }; + TensorClustering = derive2 { name="TensorClustering"; version="1.0.2"; sha256="094pk4v78d97sanrkirk0dyhy6w2i43imcw21q2r76w11d62w7k7"; depends=[abind combinat MASS mvtnorm pracma Rcpp rTensor tensr TRES]; }; + TensorComplete = derive2 { name="TensorComplete"; version="0.1.0"; sha256="06lr0blkf5pv1zwlffn7m0xxscjii4jg930nkzrh2k7dnbka6vsx"; depends=[MASS pracma tensorregress]; }; + TensorTest2D = derive2 { name="TensorTest2D"; version="1.0.3"; sha256="1ac17qb50yz265mxnkd09bl0gy850csjq2w0qras2g1nsbivrpm3"; depends=[]; }; + Ternary = derive2 { name="Ternary"; version="1.2.2"; sha256="0x610fr36csqj2xq44nvcampcl2m3ca2s29ks885b56kwaa7aahn"; depends=[shiny viridisLite]; }; TestCor = derive2 { name="TestCor"; version="0.0.2.2"; sha256="01ndiqi0z672ymm2bid0r0cqz8fqd9268xgmmq74z3agj81l5c5j"; depends=[MASS Rcpp RcppArmadillo]; }; - TestDataImputation = derive2 { name="TestDataImputation"; version="1.2"; sha256="1nba79i8wr6g1m8hrfa0msz28j9rly51bm8b1qkigfxnzpdhyjmq"; depends=[Amelia mice]; }; - TestDesign = derive2 { name="TestDesign"; version="1.2.2"; sha256="17wvg0fcj7zaykvdlry45qlmsp4h1p34bn8y7240276yg5hw4q6p"; depends=[crayon foreach logitnorm lpSolve Rcpp RcppArmadillo]; }; + TestDataImputation = derive2 { name="TestDataImputation"; version="2.2"; sha256="17yvrfz909c3j4rc9xl026iq25cjwh5gy0r1g9nq3vdcij03s25z"; depends=[Amelia mice]; }; + TestDesign = derive2 { name="TestDesign"; version="1.2.6"; sha256="19kaqvlghiwgfnr53f7grj2bsih743i3mls57sblzwzwr3p59qkd"; depends=[crayon foreach logitnorm lpSolve Rcpp RcppArmadillo]; }; TestDimorph = derive2 { name="TestDimorph"; version="0.4.1"; sha256="09r265mmr3bk78pqca30n9bz62p6822mg0nhrfaip2lxhl3bfqcw"; depends=[caret corrplot cutpointr dplyr ggplot2 Morpho multcompView tidyr tmvtnorm truncnorm]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; TestGardener = derive2 { name="TestGardener"; version="0.1.4"; sha256="1230nrislm4ci22s9y160842qiccf3ngmfq8fywm8vg57xggz1dj"; depends=[dplyr fda ggplot2 ggpubr knitr pracma rgl rmarkdown stringr tidyr utf8]; }; @@ -5099,10 +5285,11 @@ in with self; { ThreeWay = derive2 { name="ThreeWay"; version="1.1.3"; sha256="17yl8zq029wiy3c0f4ssljx85dnm9n862wj2d24w7p0lxlvarmz6"; depends=[]; }; ThreeWiseMonkeys = derive2 { name="ThreeWiseMonkeys"; version="0.1.0"; sha256="1qdb3m15q0gg8dk2znc2syy2jdqsp2893a7ilfa8rg3r2vps86yg"; depends=[stringr tuneR]; }; Thresher = derive2 { name="Thresher"; version="1.1.3"; sha256="16zf5cwc2c5j61xcrqsycwrsc162spyqgk9mac7n37mymn5agbwp"; depends=[ade4 ClassDiscovery colorspace MASS movMF oompaBase PCDimension]; }; - ThresholdROC = derive2 { name="ThresholdROC"; version="2.8.3"; sha256="0p999hi30sk0spmy1g0qnsdf6zpyyvxrgsijv3d00vinylba8is8"; depends=[MASS numDeriv pROC]; }; + ThresholdROC = derive2 { name="ThresholdROC"; version="2.9.0"; sha256="1mzz05aqq6crcfm5bbv0gbpvndk0yy1lf4fxz8zva790g16cilq0"; depends=[ks MASS numDeriv pROC]; }; + TiPS = derive2 { name="TiPS"; version="1.0"; sha256="0wsgglgh5li76zvr2srp3imj5vqi2n6kanxamhfmgjmws4lf9klq"; depends=[gtools inline Rcpp stringr]; }; TickExec = derive2 { name="TickExec"; version="1.1"; sha256="0v0m0wi49yw0ply19vnirl2zwnk61sxalx24l8cadvkssgs13509"; depends=[]; }; TiddlyWikiR = derive2 { name="TiddlyWikiR"; version="1.0.1"; sha256="0vwwjdmfc8c0y2gfa8gls1mzvp29y39c9sxryrgpk253jj9px1kr"; depends=[]; }; - TideCurves = derive2 { name="TideCurves"; version="0.0.4"; sha256="1i5qm6wwm6m0xrmr6dvk3pn6apxxqw9hznv8vypzwnky7bizkl90"; depends=[chron data_table fields]; }; + TideCurves = derive2 { name="TideCurves"; version="0.0.5"; sha256="1cnfnmwmlicsi243058zq3302niwk2l1agrrjy4k7rf1v7gfy6xx"; depends=[chron data_table fields]; }; TideHarmonics = derive2 { name="TideHarmonics"; version="0.1-1"; sha256="1g1v99gh6mns4l8ipmw7kpalbk07m92ybcqjq7b0wsjmdvs1y67s"; depends=[]; }; TideTables = derive2 { name="TideTables"; version="0.0.3"; sha256="0xfwikz9f58pw1j5vp45wp44lbr8b8ijlac474nzahq46d411afp"; depends=[chron data_table]; }; Tides = derive2 { name="Tides"; version="2.1"; sha256="0da3z010ali83qf8mf1znicqv8vvsa5r93mc40ax60ln2w33nlrm"; depends=[]; }; @@ -5117,44 +5304,47 @@ in with self; { TmCalculator = derive2 { name="TmCalculator"; version="1.0.1"; sha256="1h1dk4kq6zi3a9wi6bxsqz3b9jk740811dp65sb6lqc668xy5mps"; depends=[]; }; Tmisc = derive2 { name="Tmisc"; version="1.0.0"; sha256="1zs7zxawl13pils9hff0i5aplxy32ccp27jcmjdh39lgf083s3v3"; depends=[dplyr magrittr rstudioapi tibble]; }; TooManyCellsR = derive2 { name="TooManyCellsR"; version="0.1.1.0"; sha256="0cypjf4a9q2kw4gwxlr59nbwn25wrrhrcmpksxi2yhd3qhk71q8n"; depends=[cowplot ggplot2 imager jsonlite Matrix]; }; - ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.5"; sha256="0pg8ymim9pbbmnqnvws1v7g874mv65s1idb4m7dcy800v63pzq7s"; depends=[calibrate MASS robCompositions]; }; + ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.6"; sha256="1c37xv8h4jycnn9cnxlvby3p8hl3gfp4bdsbxm06bb323qj774pd"; depends=[calibrate HardyWeinberg MASS]; }; + TopDom = derive2 { name="TopDom"; version="0.10.1"; sha256="1rryfnwvdlpdrjgs6sciy91cxfp4jykll0swclasydjvj4n642i6"; depends=[ggplot2 matrixStats reshape2 tibble]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.7"; sha256="0xwp926l8mr0j3lfxy2077d1qs150iid6v7i7015wqzif948jkxz"; depends=[gplots Hmisc]; }; TopicScore = derive2 { name="TopicScore"; version="0.0.1"; sha256="1x6s3yn25rj8mbd25yi7f2rz0nwg8n0l1vs6r250kyjb17d2javm"; depends=[combinat Matrix quadprog RSpectra slam]; }; - TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="2.0.0"; sha256="1mk538iw08wxbspr1pn4dmmp4hki3glnpwpwz9idz2l1cik7zri4"; depends=[TreeTools]; }; + TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="2.0.1"; sha256="0i21g7zzad973802kfp8s638d3g70c4vkrm59i9frb71apvkljk2"; depends=[TreeTools]; }; TouRnament = derive2 { name="TouRnament"; version="0.2.5"; sha256="09i0frzzxi5ymjlvh81rmisxh35amrvhxbkjq5351fhlpf1n977z"; depends=[]; }; - Tplyr = derive2 { name="Tplyr"; version="0.4.0"; sha256="17phnsbhbgw8r3j5gk18rc9651azb3365azdljfprc6yp29cd883"; depends=[assertthat dplyr forcats lifecycle magrittr purrr rlang stringr tibble tidyr tidyselect]; }; - TraMineR = derive2 { name="TraMineR"; version="2.2-1"; sha256="0varwhc2jvmj36x6vslhfmqwms7zzs4p32ciaqh214i9pc93czhl"; depends=[boot cluster colorspace Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.6.1"; sha256="1dz9k2v420v8z83zd8xb4wf2yd0gi99vvmva3ymq7mdm7bj3q3vw"; depends=[cluster colorspace doParallel foreach gtools RColorBrewer survival TraMineR]; }; + Tplyr = derive2 { name="Tplyr"; version="0.4.1"; sha256="02nghhff76dpmsbs3ysal99vgvzmbkff2sfjhjivcb1w7kpsdsim"; depends=[assertthat dplyr forcats lifecycle magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + TraMineR = derive2 { name="TraMineR"; version="2.2-2"; sha256="1acpfgapaid4wii9vj0gnbgy5ln0k4hw5niniygndfwiypi2620c"; depends=[boot cluster cNORM colorspace Hmisc psych RColorBrewer]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.6.2"; sha256="0j39sxd3x447lnn2sxhn3z6qp5spfsfvpy4w0438pw55w8djxs33"; depends=[cluster colorspace doParallel foreach gtools RColorBrewer survival TraMineR]; }; + TraceAssist = derive2 { name="TraceAssist"; version="0.1.0"; sha256="03x071nsfgz1z2qp1zn1y3hfx8ydpj0z4rcfk2i588ad53z86w4c"; depends=[glmnet keras Matrix quadprog]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.2"; sha256="1kpdiwwzxsdwv5255xlvcnxvnp39ky0aws41g1l5i7cpbv88kca5"; depends=[fields RColorBrewer]; }; - Trading = derive2 { name="Trading"; version="2.1"; sha256="08vhcf3hl3b8pczaawf25vl6j2ap8zbmwdxxdi2g05hq05lywwf9"; depends=[PerformanceAnalytics reticulate]; }; + Trading = derive2 { name="Trading"; version="2.2"; sha256="0g2jcfp2yp3x6rbf1wvbmq7mkf0r6ssj6j4r1b41f2llw2pgqnnr"; depends=[PerformanceAnalytics reticulate]; }; TrafficBDE = derive2 { name="TrafficBDE"; version="0.1.0"; sha256="1lnh9lbjxaradivnd1dkd2szggjh2r4v7klpyxb862dxsmdxxrqw"; depends=[caret data_table dplyr lubridate neuralnet RCurl zoo]; }; TraitStats = derive2 { name="TraitStats"; version="1.0.1"; sha256="00la8ix8wskn1354anx0zd70q1rj65a3407sq25b04hif340liyg"; depends=[gridExtra lattice qpdf rlist]; }; TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.6"; sha256="1n5qcyc1kb8rdrqaji7pp63l2gyr6jim8spm8ydb4lnqfcnrin9g"; depends=[geosphere rgdal RPostgreSQL sp spacetime trajectories xts]; }; TransModel = derive2 { name="TransModel"; version="2.1"; sha256="0brlr4w5k8xsgbrizm7ha0cmq0kqzd2fcjpszq7gym844jj93csi"; depends=[MASS survival]; }; TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; }; TransPhylo = derive2 { name="TransPhylo"; version="1.4.5"; sha256="0g92kwi1nlmpc8m4pc9kv9xhczryr2kn9icfr3js7da7vy8g50xy"; depends=[ape Rcpp]; }; + Tratamentos_ad = derive2 { name="Tratamentos.ad"; version="0.2.0"; sha256="1knccyfnzacl4nfy3v7ha3p88s3csnwdqrqb7igradmz8cxa6phi"; depends=[]; }; TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; }; TreeBUGS = derive2 { name="TreeBUGS"; version="1.4.7"; sha256="0cwhgphdk0zndnqx0qcq42zajhwvgs9myg9dmm6dnp0ik0g5syqa"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; TreeDep = derive2 { name="TreeDep"; version="0.1.3"; sha256="0ja2hp9sxzybac6dqdsns5q1rj12swl240znsnsffg9mkvzhq6rl"; depends=[ggplot2 lubridate]; }; TreeDiagram = derive2 { name="TreeDiagram"; version="0.1.1"; sha256="03kn9h37wgx300szzxmg21zc5iz3a9v8f2ydzv6dv6rhpa7yn0v5"; depends=[ape cowplot ggplot2 stringr tree]; }; - TreeDist = derive2 { name="TreeDist"; version="2.0.3"; sha256="1b10jd4z5lv8lml5ab9h6cgxw8vcjgz9fd2aw2jlkrymjfm9bnri"; depends=[ape colorspace memoise phangorn Rcpp Rdpack shiny shinyjs TreeTools]; }; + TreeDist = derive2 { name="TreeDist"; version="2.2.0"; sha256="076mmxhpi78pjh3d2p1wdcgwqgggnw8j55n44gkixlh4bhwi4gdn"; depends=[ape cli colorspace memoise phangorn Rcpp Rdpack shiny shinyjs TreeTools]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; - TreeSearch = derive2 { name="TreeSearch"; version="0.4.3"; sha256="0g5fdmadhpqq2cs5ss75008v6qrd77hppsqrbvbk46y2g83kn0bq"; depends=[ape phangorn R_cache Rdpack TreeTools]; }; + TreeSearch = derive2 { name="TreeSearch"; version="1.0.0"; sha256="04is41fy593kcq9widrixsy5kfkxdwp2dbgnc2wza3ryxi82803d"; depends=[ape cli cluster fastmatch future phangorn promises protoclust Rcpp Rdpack Rogue shiny shinyjs TreeDist TreeTools]; }; TreeSim = derive2 { name="TreeSim"; version="2.4"; sha256="0nmzx2723n1f5lr951zz2ih2gnpfim5qzihlayhpf181z1qijv93"; depends=[ape geiger]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="2.5"; sha256="125c9rim272h0dfyygmmijz8dcnch3g9wy1ngki77dyrmdl77yfx"; depends=[ape TreeSim]; }; - TreeTools = derive2 { name="TreeTools"; version="1.4.4"; sha256="0q2figlkfd7a892s06fnwq62v5p64rnjjd3a25g448b361ymmch9"; depends=[ape bit64 colorspace phangorn R_cache Rcpp Rdpack]; }; + TreeTools = derive2 { name="TreeTools"; version="1.5.0"; sha256="022sj0pzwyci363brdq4hfn45j2v82n5fm0ihw0ci8sxhkdfa9qn"; depends=[ape bit64 colorspace fastmatch phangorn R_cache Rcpp Rdpack]; }; TrendInTrend = derive2 { name="TrendInTrend"; version="1.1.3"; sha256="0ijkijyhxhjc7202qssa9wnrmwgv4miv5n8jbml4qqj80kcsbdwp"; depends=[nleqslv pracma pROC rms]; }; TrendSLR = derive2 { name="TrendSLR"; version="1.0"; sha256="1x8j2dg3m7b22gva33y4s318a41wl60sz93y868z4j65hp13jb5k"; depends=[changepoint forecast imputeTS plyr Rssa tseries zoo]; }; Trendtwosub = derive2 { name="Trendtwosub"; version="0.0.2"; sha256="12ibxxq58h9w7hlrsxwdirh02casj495rxbfknaggwfx3w30nm56"; depends=[magrittr usethis]; }; TriDimRegression = derive2 { name="TriDimRegression"; version="1.0.0.0"; sha256="0kfz72733wji31r7khx7jl97ybdf1x3brnjd6af3lw48a4awk17l"; depends=[bayesplot BH dplyr Formula future glue loo purrr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tidyr]; }; TriMatch = derive2 { name="TriMatch"; version="0.9.9"; sha256="17v8hdm594i9qs5hvrzb1k94wrzvx07479rmvbk4314fim27mabg"; depends=[ez ggplot2 gridExtra PSAgraphics psych randomForest reshape2 scales]; }; - TriadSim = derive2 { name="TriadSim"; version="0.2.0"; sha256="12dpndq09blx1n57vpps646qmxzlz22987729brgxgdg69z0259s"; depends=[doParallel foreach snpStats]; }; + TriadSim = derive2 { name="TriadSim"; version="0.3.0"; sha256="0r9p50vw2gcbm02vl24q4g1vj46ll0v1vvxi2ip1k73hymv6pz3g"; depends=[doParallel foreach snpStats]; }; TrialSize = derive2 { name="TrialSize"; version="1.4"; sha256="0k162n3jr2ixdl3pp90izdr83z14hj70jb9mrfw3iqz0pczp2cpj"; depends=[]; }; TrioSGL = derive2 { name="TrioSGL"; version="1.1.0"; sha256="0xzyv1vppw0v1xjpf83nnv1sx1xy7197ay6l7dzvr0vllappdam9"; depends=[]; }; TripleR = derive2 { name="TripleR"; version="1.5.3"; sha256="13s1vlmr4sqa2sq2fbcld86bh3g73yb204aawbks11rjblwzvb0h"; depends=[ggplot2 plyr reshape2]; }; TropFishR = derive2 { name="TropFishR"; version="1.6.2"; sha256="1mmb573gf82rxsvrjal4iy5f5gjhjaws6kcabnhhp6cn5ainl64r"; depends=[doParallel GA GenSA Hmisc MASS msm propagate reshape2]; }; TrtCombo_FactorialExp_SR = derive2 { name="TrtCombo.FactorialExp.SR"; version="4.0.4"; sha256="1kc5nqivsia801hdll5zcl4w6ayx7pabx7xz70l75h1f966ahnr7"; depends=[]; }; - TruncatedNormal = derive2 { name="TruncatedNormal"; version="2.2"; sha256="0zfq6y0d7ydj7mzwmnd6fvy4nk8pd7cs5n1xlysrz5378zjnkw0p"; depends=[alabama nleqslv randtoolbox Rcpp RcppArmadillo]; }; + TruncatedNormal = derive2 { name="TruncatedNormal"; version="2.2.2"; sha256="05cfn7mdq0hgw97bbb227in9ccjz727sp67xpnpx2r1ajvl6gxdf"; depends=[alabama nleqslv randtoolbox Rcpp RcppArmadillo]; }; Tsphere = derive2 { name="Tsphere"; version="1.0"; sha256="0xgxw2hfj40k5s0b54dcmz7savl8wy4midmmgc7lq4pyb8vd58xx"; depends=[glasso rms]; }; TukeyC = derive2 { name="TukeyC"; version="1.3-3"; sha256="0bdnfr44hk4c1yh7i9ya95gwbwnplj3hf0k0pl1wm4ghiav39vcq"; depends=[doBy]; }; TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.4"; sha256="1zx6gm0s0nardhb3xm3c53pd46kq6grsknpldnjjfhn3029a3nr7"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; }; @@ -5168,17 +5358,19 @@ in with self; { TwoRegression = derive2 { name="TwoRegression"; version="0.1.2"; sha256="0qr9zrfmbh4c4207gvwa384q5njjx6nsl6lc58d25m8bkfalifpi"; depends=[data_table dplyr magrittr seewave]; }; TwoSampleTest_HD = derive2 { name="TwoSampleTest.HD"; version="1.0"; sha256="0xdib7hwbpy549pxihai8dpy91h94wwl3b76jn7p0m15ky7z18df"; depends=[]; }; TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; }; + TwoWayFEWeights = derive2 { name="TwoWayFEWeights"; version="0.1.0"; sha256="0zjbh24jm77vj62rw433dqy57m0hciaw1l2l7x6hpzn34iggdwwv"; depends=[dplyr estimatr fixest rlang stringr]; }; UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; UBL = derive2 { name="UBL"; version="0.0.7"; sha256="1zppc8mgmj4ymxfdvhqiirlf80wh65y58wqm92fgjdn7s06v5skf"; depends=[automap gstat MBA randomForest sp]; }; UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; - UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="0.5.0"; sha256="0rilgngbfh4ignlzm5l6z9mwjngwmhlj9dvaknf8rg9a4g67vgqz"; depends=[dplyr DT ggplot2 ggpubr magrittr plotly RColorBrewer shiny shinyBS shinyjs shinythemes shinyWidgets tibble UCSCXenaTools zip]; }; - UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.4.4"; sha256="1311ah8xixfn776y418xkz9284jd7clhv28vw4hap2m9vca453qy"; depends=[dplyr httr jsonlite magrittr readr rlang]; }; - UComp = derive2 { name="UComp"; version="2.1.2"; sha256="1v4hwdhpjf4bi6zbf0jykqxx3kq97h7kw355lp66f613haszzn2p"; depends=[Rcpp RcppArmadillo]; }; - UKFE = derive2 { name="UKFE"; version="0.1.6"; sha256="13amx1757spll37nsd84dflz888y47q92xnf26r6qd3vshy668dp"; depends=[]; }; + UCSCXenaShiny = derive2 { name="UCSCXenaShiny"; version="1.1.1"; sha256="0hjivd6d91j94nl2wd9y2dfzlf5dai4f66a85nxxmjzyvip3dj3w"; depends=[dplyr ezcox forcats ggplot2 ggpubr magrittr ppcor psych purrr shiny stringr tibble tidyr UCSCXenaTools]; }; + UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="1.4.7"; sha256="1s3x9vmvnb0g3fmrgjw636g3nhshbgkv0g2dyrk347bv7bdj52zg"; depends=[digest dplyr httr jsonlite magrittr readr rlang]; }; + UComp = derive2 { name="UComp"; version="2.2.2"; sha256="024fmarngqmj8db7rkah2cnsix3m0zqz153j5585caij302v8rkl"; depends=[Rcpp RcppArmadillo]; }; + UKB_COVID19 = derive2 { name="UKB.COVID19"; version="0.1.1"; sha256="0626cix3v5j2nflqy6g0dc2101pif3p8x3r62d5kmn1si5p171gn"; depends=[data_table dplyr here magrittr questionr tidyverse]; }; + UKFE = derive2 { name="UKFE"; version="0.1.7"; sha256="1b2q93q9bbxkwgi77c9qjrgn3scar4fyzmz16j30z30v1w0jif1x"; depends=[]; }; UKgrid = derive2 { name="UKgrid"; version="0.1.3"; sha256="1x44iry2j5qbvd8ac9rv9dmg60hbhry2v4jj9hmm49bx10iwl9h2"; depends=[data_table dplyr lubridate magrittr tsibble xts zoo]; }; - UMR = derive2 { name="UMR"; version="1.0.0"; sha256="12xwv39p3ry8ijf9z8px9vvwd48pnda24cnp0y9qfhqp9iy3r083"; depends=[decon]; }; + UMR = derive2 { name="UMR"; version="1.1.0"; sha256="05g2gk7bmhzyill6fgq396yk0yi7qz4mdcy3cfzzx5nyr11rc8a7"; depends=[decon distr trust]; }; UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; - UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; + UNF = derive2 { name="UNF"; version="2.0.7"; sha256="1i7aj9w90c1bn581l820iasxhs4ibs7xwbhid7gdkz9f87cz568r"; depends=[base64enc digest]; }; UNPaC = derive2 { name="UNPaC"; version="1.1.0"; sha256="12w6vjvkzivnqa6jd75dwr8h8d8xbc2519pqnqw9fk3yanqzx9rk"; depends=[huge PDSCE]; }; UPCM = derive2 { name="UPCM"; version="0.0-3"; sha256="1apah04qdgvxxf6q6xr53716pcrmds86sn8f7ykxj93ggg8k0bvl"; depends=[cubature ltm mvtnorm numDeriv Rcpp RcppArmadillo statmod]; }; UPG = derive2 { name="UPG"; version="0.2.2"; sha256="01w54qbbyiwlw1dymi5gmxd26vds1am7r32p3gpq2ybfghk9kxbw"; depends=[coda ggplot2 knitr matrixStats mnormt pgdraw Rcpp RcppArmadillo RcppProgress reshape2]; }; @@ -5189,9 +5381,10 @@ in with self; { UScancer = derive2 { name="UScancer"; version="0.1-2"; sha256="0p1kxw1phqq598ljk3njznc9kmgscc8gmwdrvx1scba9rr6n61kl"; depends=[rgdal]; }; UScensus2000cdp = derive2 { name="UScensus2000cdp"; version="0.03"; sha256="143hqnzdla3p31n422ddzaaa34wc6xnnhil4y53m4qydyg407700"; depends=[foreign maptools sp]; }; UScensus2000tract = derive2 { name="UScensus2000tract"; version="0.03"; sha256="11ppw75k8zghj7xphx5xyl3azsdsyd142avp0la2g941w6f8l2n1"; depends=[foreign maptools sp]; }; - UScensus2010 = derive2 { name="UScensus2010"; version="0.11"; sha256="1q06spkh8f4ijvfg557rl3176ki4i8a1y39cyqm3v7mnzwckyj3l"; depends=[foreign maptools sp]; }; - USgas = derive2 { name="USgas"; version="0.1.0"; sha256="0ym75xzbiw0pmnpzkw107rjwa0fjia1fa3ldq6yhsqkr275qmx2r"; depends=[]; }; + UScensus2010 = derive2 { name="UScensus2010"; version="0.20.0"; sha256="0dby532dmmhaz7gisihg4dn70jyx5llfvm2zl2h0pxyqrxvm69d2"; depends=[foreign maptools sp]; }; + USgas = derive2 { name="USgas"; version="0.1.1"; sha256="1yx5qc7ilb1g2cv9w35ryw778qbi9fs0licxc2xcp5fbp709pd65"; depends=[]; }; USgrid = derive2 { name="USgrid"; version="0.1.2"; sha256="0babwjnbdyfa2cf65gn08nzy1bs92i56lnhpx558yn0dyk75cz5s"; depends=[tsibble]; }; + USpopcenters = derive2 { name="USpopcenters"; version="0.1.0"; sha256="0m2rjgwqhsx31ykcfwln3q7d6vnb9f0qbyncyg8fbs0iq1wadrmg"; depends=[]; }; UStatBookABSC = derive2 { name="UStatBookABSC"; version="1.0.0"; sha256="16r6clhfaalfsg5hmvzm8a128zygxax5hyc0vr1q9bsw9hj7cs0c"; depends=[]; }; UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; }; @@ -5202,18 +5395,20 @@ in with self; { UncDecomp = derive2 { name="UncDecomp"; version="1.0.1"; sha256="1m44pgk7nffay09m4gkwb0khq0qjd7bq1p72blsmib46wmnwqfsa"; depends=[dplyr ggplot2]; }; UncertainInterval = derive2 { name="UncertainInterval"; version="0.7.0"; sha256="1lywwjkbmlbxhp2ahmsw2f47i0p848cky7xx1lxrg5ydfzq9kzl5"; depends=[car MASS nloptr psych reshape2 shiny zoo]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; - Unicode = derive2 { name="Unicode"; version="13.0.0-2"; sha256="08af3j06npj37z0bcgpqdcya07d1ribll9izkir2fcyw61zs65qy"; depends=[]; }; - UnifiedDoseFinding = derive2 { name="UnifiedDoseFinding"; version="0.1.7"; sha256="1kapm7vwsn1a0prjplbd1im480dy6l02vsil82qxbhamvnc8his2"; depends=[]; }; - UniprotR = derive2 { name="UniprotR"; version="2.0.6"; sha256="1hvfbg2bj2j27qp1d0y5j49yh9zmq5gbgg2187nnysvl5c7zpdgf"; depends=[alakazam curl data_tree dplyr ggplot2 ggpubr gprofiler2 gridExtra htmlwidgets httr magick magrittr networkD3 plyr qdapRegex scales stringr tidyverse]; }; + Unicode = derive2 { name="Unicode"; version="14.0.0-1"; sha256="11jsbpkqg80a8657arklz1ixmc0shk8s5ggb9q8a39nmwk0j536z"; depends=[]; }; + UnifiedDoseFinding = derive2 { name="UnifiedDoseFinding"; version="0.1.8"; sha256="1mkqfdbjk3yk5clad9vlhzr5ab8v14ywz9jvrvk9m4yjh43p2h3i"; depends=[]; }; + UniprotR = derive2 { name="UniprotR"; version="2.1.0"; sha256="1ykdfl8qi1sjv1algpmcp6fg5llnbggm963iqkk23cm7fz98pzr3"; depends=[alakazam curl data_tree dplyr ggplot2 ggpubr ggsci gprofiler2 gridExtra htmlwidgets httr magick magrittr networkD3 plyr progress qdapRegex scales stringr tidyverse]; }; UnitCircle = derive2 { name="UnitCircle"; version="0.1.3"; sha256="0z5ssps8l5ka4aw4984qml15scw4pfssara5dls82afhfhpkszsr"; depends=[]; }; + UnitStat = derive2 { name="UnitStat"; version="1.1.0"; sha256="185ivm4kg6hzqx3srk1shvpd5vlc0akn1sbg3wqcdsk2i2x6vhhm"; depends=[lmtest]; }; UnivRNG = derive2 { name="UnivRNG"; version="1.2.3"; sha256="14z2yqv14sv16ycf7jf2kkp8pqn12d9lq4l568vmdm10qrl5x39d"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.4.0"; sha256="007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-6"; sha256="1lr8z45r5s7fxrd42rswm6w7s3k5nds244b9d525jb5v4n8w9kpw"; depends=[HistData Hmisc MASS]; }; UtilityFrailtyPH12 = derive2 { name="UtilityFrailtyPH12"; version="1.0"; sha256="06f5gmwwk1r14ab6v5jcxz0pmdph7ffi4y57mjg9byn7pjnibflk"; depends=[bindata mvtnorm Phase123 Rcpp RcppArmadillo]; }; V8 = derive2 { name="V8"; version="3.4.2"; sha256="1vfj89shfzx7b6papi2y671l8gksng775kilmqzl5gx87i3l61i1"; depends=[curl jsonlite Rcpp]; }; VALERIE = derive2 { name="VALERIE"; version="1.1.0"; sha256="15z8234jhh7hv3gijrvy8hap6gdgvm6qll9b00qbji7vyc3dg4pg"; depends=[GenomicAlignments GenomicRanges ggplot2 ggplotify ggpubr IRanges pheatmap plyr Rsamtools scales]; }; - VAM = derive2 { name="VAM"; version="0.5.2"; sha256="1rykyp1f6hxn1r879jrg108aply14vpmvjrv2wxlci0fg2y8krq5"; depends=[MASS Matrix]; }; + VAM = derive2 { name="VAM"; version="1.0.0"; sha256="04lq8i4zwdc9a4n4hvabdyv4a4cmmqbf534cdnnck7jc0dk5rphr"; depends=[MASS Matrix]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; + VARDetect = derive2 { name="VARDetect"; version="0.1.5"; sha256="0cj4cc2kys6hblyh88fc64aaz4ln7961y48qkffrmv3367wr1ypj"; depends=[igraph lattice MTS mvtnorm pracma Rcpp RcppArmadillo sparsevar]; }; VARMER = derive2 { name="VARMER"; version="1.0.0"; sha256="0qym31jpmb2dyrqsk1s6wp1c3b15mf79lrrk46p6hkmdddkxqgnj"; depends=[cluster deldir gstat hydroGOF Metrics pracma raster rgl sf tictoc zoo]; }; VARSEDIG = derive2 { name="VARSEDIG"; version="1.9"; sha256="18j73wm22bjvf2y0c09bfmdyx4x2gd0jhfcqhbk1sgsk24zjr63z"; depends=[]; }; VARshrink = derive2 { name="VARshrink"; version="0.3.1"; sha256="09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl"; depends=[ars corpcor MASS mvtnorm strucchange vars]; }; @@ -5233,26 +5428,26 @@ in with self; { VFS = derive2 { name="VFS"; version="1.0.2"; sha256="1b8sl8id2gj4iqkpjzd3giybbix2jvskwsbw1kqj3zqr77hygxwg"; depends=[e1071 nleqslv]; }; VGAM = derive2 { name="VGAM"; version="1.1-5"; sha256="1fx123h4x5awzshv0m4jqbbllrdjfpslb2i8gl9phm1y1wahn69h"; depends=[]; }; VGAMdata = derive2 { name="VGAMdata"; version="1.1-5"; sha256="1n5g2ymcanf6msjix6y9lsff65iq4898zmd5blfj57d2vbp6ibsa"; depends=[VGAM]; }; - VGAMextra = derive2 { name="VGAMextra"; version="0.0-4"; sha256="003wd6j7df356qgz9ix7fwydy4kfvqd7ngn0k7828qpcais9bjcq"; depends=[VGAM]; }; + VGAMextra = derive2 { name="VGAMextra"; version="0.0-5"; sha256="11s7s2dm2yf5s9qbwbyavz01l9fk86grp4mlhrh8hd6lfmxxxcxm"; depends=[VGAM]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; + VIC5 = derive2 { name="VIC5"; version="0.2.3"; sha256="1yhg1f5qvjs0g642xab634b6vk7czxy7734qk2n3fqim90qnz3nn"; depends=[foreach lubridate Rcpp RcppArmadillo]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; VIFCP = derive2 { name="VIFCP"; version="1.2"; sha256="0w41k25vss806m5vpwmmcfsmwaixmln0pliql3a6xlwsihha5i34"; depends=[]; }; VIGoR = derive2 { name="VIGoR"; version="1.0"; sha256="1c24s917aafqy46b3xlsw8v3afs11nd5bq83vlygpgnz1612jpga"; depends=[]; }; - VIM = derive2 { name="VIM"; version="6.1.0"; sha256="1a8aw0ysaf0al95m2la2zx1p3g5mnwqx0x30br1s1dqqkfnv57hz"; depends=[car colorspace data_table e1071 laeken magrittr MASS nnet ranger Rcpp robustbase sp vcd]; }; + VIM = derive2 { name="VIM"; version="6.1.1"; sha256="0fbpm6y3hhiw8srnbc38k19b859jcqzsh78ib8yvj86gck5av0bm"; depends=[car colorspace data_table e1071 laeken magrittr MASS nnet ranger Rcpp robustbase sp vcd]; }; VIRF = derive2 { name="VIRF"; version="0.1.0"; sha256="0bdkmbmkmmj78h9x025qsdzjzcx8xr2s98wlspcsghlz4hxkzcas"; depends=[BigVAR expm gnm ks matlib matrixcalc mgarchBEKK rmgarch]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; VLMC = derive2 { name="VLMC"; version="1.4-3-1"; sha256="0cwfpxcj8g68j9z9fl66i0amj8ypf199iv3yyxzsmniqv4w5x4ar"; depends=[MASS]; }; - VLTimeCausality = derive2 { name="VLTimeCausality"; version="0.1.2"; sha256="063gmc2hnr689wv3b289cy51lbp9n6rl0858aa0s7dkhh57fd5kw"; depends=[dtw ggplot2 RTransferEntropy tseries]; }; + VLTimeCausality = derive2 { name="VLTimeCausality"; version="0.1.3"; sha256="1a5v2yp2pmnx0h0k2kvpw0cpn1bwz3c68vwdj7sz8r85c7mw326d"; depends=[dtw ggplot2 RTransferEntropy tseries]; }; VNM = derive2 { name="VNM"; version="7.1"; sha256="19qglcibb7r6jjz0n0piklwfv3hi4jphd6vmyfbm0ccjjkmn5nin"; depends=[Rcpp]; }; VOSONDash = derive2 { name="VOSONDash"; version="0.5.7"; sha256="1qivx5ddl9jsn6q6ic2w8jrczxlx23z087k5arfz2rixgj7rndyg"; depends=[data_table httpuv httr igraph lattice magrittr RColorBrewer shiny SnowballC systemfonts syuzhet textutils tm vosonSML wordcloud]; }; VSURF = derive2 { name="VSURF"; version="1.1.0"; sha256="1azfd4sb89mp27l86k293qj81x94gfiy1ihwnb6c558p8h69xsgf"; depends=[doParallel foreach randomForest ranger Rborist rpart]; }; - VSdecomp = derive2 { name="VSdecomp"; version="0.1.0"; sha256="1n0ia5y9sm7ix57c2pi70x0739snb6bzbzbjvyn170gq15h41s3n"; depends=[ggplot2 Hmisc lfe reshape rlang]; }; + VSdecomp = derive2 { name="VSdecomp"; version="0.1.1"; sha256="1vx68rhsxvi3kkrwr98hqhivhdmb9dm9rnmgspx74dskhkysjwbg"; depends=[ggplot2 Hmisc lfe reshape rlang]; }; VTShiny = derive2 { name="VTShiny"; version="0.1.0"; sha256="1zq6irla3q7hqs8jpjdya7vy3frqrj72rwmd1sgxwrkgpmpxw6x7"; depends=[EnvStats rmarkdown shiny]; }; - VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; VUROCS = derive2 { name="VUROCS"; version="1.0"; sha256="1r4hq7az50v7lbyx5w6b4zs2kwi5cypqn9k6ac4kr8jr3jlyanr3"; depends=[doParallel foreach Rcpp RcppArmadillo]; }; VWPre = derive2 { name="VWPre"; version="1.2.4"; sha256="1hhpqxzh9h5dy45r04l1fa1k4a14s0m6z6fhfg22kpwpryszbc44"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; - VancouvR = derive2 { name="VancouvR"; version="0.1.2"; sha256="06f9q2zfd50f10bwci24lqylb8hfav66r44d849rz6x24hf5ybbx"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; + VancouvR = derive2 { name="VancouvR"; version="0.1.6"; sha256="1c9wnqv64gdaj74nwn106zmaz03r2i3na8j4m5akfmis1yhj0qgf"; depends=[digest dplyr httr purrr readr rlang sf tibble urltools]; }; VarBundle = derive2 { name="VarBundle"; version="0.3.0"; sha256="0jfx9gkb3f29lgc0nrz3xc7m2ham0scx9lay7x5a6ira7crga6cr"; depends=[crayon dplyr glue magrittr R6 stringr tibble]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarRedOpt = derive2 { name="VarRedOpt"; version="0.1.0"; sha256="0h44m8850q4aksrqj11yr2a2qj37w8fhv0plpvdzcl087ifyj0g9"; depends=[]; }; @@ -5272,16 +5467,18 @@ in with self; { VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.8"; sha256="0yvm3kkc7ssk85ripdgbxj8gazqb1dfswgjy63c3gb135zi2cbqk"; depends=[Rcpp]; }; VetResearchLMM = derive2 { name="VetResearchLMM"; version="1.0.0"; sha256="1a7wm04bsr5shak7l8ypxlhlnx3qkq1jdpjnji1n05p6b00ih9h1"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; ViSiElse = derive2 { name="ViSiElse"; version="1.2.2"; sha256="1ay09dahlqnfrgf4gl4s45a4ahrk2xliagxqz5h826w2vzsawqcc"; depends=[chron colorspace ggplot2 Matrix reshape2 stringr]; }; - VineCopula = derive2 { name="VineCopula"; version="2.4.1"; sha256="0c6yi6rva1vxc50a9js762cw3ihv1lna7sbgbhshhrhd3bcl15mi"; depends=[ADGofTest lattice MASS mvtnorm]; }; + VicmapR = derive2 { name="VicmapR"; version="0.1.7"; sha256="1kk1dss8dz66xpgkbrgxyhf6giydbyp3vwlpm78dr5pfzfyi9l6c"; depends=[cli curl DBI dbplyr dplyr glue httr magrittr purrr rlang sf xml2]; }; + VineCopula = derive2 { name="VineCopula"; version="2.4.2"; sha256="144skq2v0bxg7gbdqm22yvhzbydjcfwk0r2rpa2v5a7a1yl4m2j6"; depends=[ADGofTest lattice MASS mvtnorm]; }; Visualize_CRAN_Downloads = derive2 { name="Visualize.CRAN.Downloads"; version="1.0.1"; sha256="0z2v2izn4aj3i6f5gh8r7pkrqpbb82bv9v4s4vqxgm066a51m4p2"; depends=[cranlogs htmlwidgets plotly]; }; VorteksExport = derive2 { name="VorteksExport"; version="0.1.8"; sha256="0r9wmd9bdarjkqmpwp85xz27nbyhjkcpxm8qb8bqjmxq4nds6nxx"; depends=[]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; VoxR = derive2 { name="VoxR"; version="1.0.0"; sha256="16r9ggc5x889g8rjqvp1q2kgf5asjzhykd1ldjy3ny9m48p501ad"; depends=[circular data_table dplyr fastcluster FNN geometry raster Rfast rgl]; }; - VulnToolkit = derive2 { name="VulnToolkit"; version="1.1.2"; sha256="17v9qaaj105nnr16j83ksyka8qihwww9a6bf8b2jiz62rkdz6y1c"; depends=[plyr XML]; }; + VulnToolkit = derive2 { name="VulnToolkit"; version="1.1.4"; sha256="01m8spmd4na7mxgnplnnq3n4pab9349z2dk44b455vcadll0fsdi"; depends=[plyr XML]; }; W2CWM2C = derive2 { name="W2CWM2C"; version="2.2"; sha256="0544wnyyv8glv4ljldmaqgynpshd5bvsqwsz9q1071dfshhxki1v"; depends=[colorspace wavemulcor waveslim]; }; W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; WACS = derive2 { name="WACS"; version="1.1.0"; sha256="09fmdlpb99q9dw17lwp0bwpklgvgiqq7bfs9ryx5r54m0niklr9d"; depends=[mclust mnormt mvtnorm tmvtnorm]; }; WARN = derive2 { name="WARN"; version="1.2-4"; sha256="18gfk9vqcqarj7j5i240wqv2dclg3csng4mih5izj40xaaxaf6q5"; depends=[MASS]; }; + WASP = derive2 { name="WASP"; version="1.4.1"; sha256="1af2qqsq811bvcwns4i0kvy36xxi9pkdawwq2n75yd9dhpv5whav"; depends=[ggplot2 sp tidyr waveslim]; }; WCE = derive2 { name="WCE"; version="1.0.2"; sha256="105pwpd9ikm0gwz4r12jl6cgs1riwsk9pn5qk9cn3msgwa0sdynx"; depends=[plyr survival]; }; WCM = derive2 { name="WCM"; version="0.2.2"; sha256="0w1m2vcxc64ksw3dm94wdigil2fpv3cvzyqmkhs2zrfjlgrdchcd"; depends=[pracma raster]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; @@ -5299,7 +5496,7 @@ in with self; { WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; WR = derive2 { name="WR"; version="0.1.1"; sha256="153f64b2zsykl5f8iwxlcqby96ag1an4w8lhs7dxx72gy5k4vs6c"; depends=[survival]; }; WRI = derive2 { name="WRI"; version="0.1.0"; sha256="09klq35q1b9c0v86mhx1klqv41jx0saivhh7a8pq7b3b9f8678zb"; depends=[CVXR expm fdadensity fdapace ggplot2 gridExtra locfit locpol modeest mvtnorm Rcpp RcppArmadillo Rfast rlang]; }; - WRS2 = derive2 { name="WRS2"; version="1.1-1"; sha256="0jsl42z4cwabsqs9ayvmkxwszv59bbfp5w3rxy1hyk6xgn8n3i2h"; depends=[MASS mc2d plyr reshape]; }; + WRS2 = derive2 { name="WRS2"; version="1.1-3"; sha256="0nnx0hzdijh9kdh69z72720z30ih0fbmn3kqycgbqxlk99wddakh"; depends=[MASS mc2d plyr reshape]; }; WRSS = derive2 { name="WRSS"; version="3.0"; sha256="16a7i6glgl5cshsn3w7gxviybmka06ylw5znz94gigyx0vhgv97p"; depends=[GGally ggplot2 Hmisc network nloptr]; }; WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.2"; sha256="1ssrqqf2hypif4nnfyl4lq03glyyg9ry9s14llf1njxamhjggfgg"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; WSGeometry = derive2 { name="WSGeometry"; version="1.1"; sha256="1xicrsqrv5ywfd6yp4l9wjwhcadbpijcs86mfafdpckv16rlkmpr"; depends=[expm imager lpSolve plot3D Rcpp RcppArmadillo RSpectra transport]; }; @@ -5307,7 +5504,6 @@ in with self; { WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaMaSim = derive2 { name="WaMaSim"; version="1.0.0"; sha256="0sa7qd2bpn3sp06mlpissxxkfhg7j1d07nnwlnz7nyg7pivwnpan"; depends=[magrittr]; }; - WaterML = derive2 { name="WaterML"; version="1.9.8"; sha256="1cl4dizxfywil3p21638fcwxl6vad303wwjl8w65cgpyn1mpr7s9"; depends=[httr XML]; }; Watersheds = derive2 { name="Watersheds"; version="1.1"; sha256="1gn52nl0rr29pqq94gjasc4fi1kjxlrpjdkgm2x56j5jbd162drk"; depends=[lattice maptools rgeos sp splancs]; }; WaveSampling = derive2 { name="WaveSampling"; version="0.1.1"; sha256="081pqxbrz8vsmjgammh0802frl8lqrw9z1svhdqjc65lqkwghh75"; depends=[Matrix Rcpp RcppArmadillo]; }; WaveletANN = derive2 { name="WaveletANN"; version="0.1.0"; sha256="08qnx0lk2laiyx1q1wxj15j0yic65r7mbhr6lqbdllq30v4dcj88"; depends=[forecast fracdiff wavelets]; }; @@ -5315,11 +5511,11 @@ in with self; { WaveletComp = derive2 { name="WaveletComp"; version="1.1"; sha256="07w2aa0jiflvxyqhgh48705hg8hjspd103jd00i2pcw2v42hwmf8"; depends=[]; }; WaveletGARCH = derive2 { name="WaveletGARCH"; version="0.1.1"; sha256="0dj5bmvzfhj1cpn8qi2ax3iipr7jlq0f9vk4b1idqgh5dmdi8lh6"; depends=[FinTS forecast fracdiff rugarch wavelets]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; - WeMix = derive2 { name="WeMix"; version="3.1.6"; sha256="1mk2f7iyd98xf5v3vb71gs0zmx7dqxj6bf2qgkwakipnpnkq1ggw"; depends=[lme4 Matrix minqa NPflow numDeriv Rmpfr statmod]; }; + WeMix = derive2 { name="WeMix"; version="3.1.8"; sha256="1d4dz3bb750xhv4cq19d4fk087sxcsrvf1ydwlfm0l3ckddcf4fw"; depends=[lme4 Matrix minqa NPflow numDeriv Rmpfr statmod]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.4.4"; sha256="1rgf9s80hk35baiknrwgnqnhxssrcxdansgpvpyhqv07bqd472nn"; depends=[apcluster doParallel doRNG dplyr foreach httr igraph jsonlite Rcpp readr rlang svglite whisker]; }; - WebPower = derive2 { name="WebPower"; version="0.5.2"; sha256="11255q41zai4q6n2mpk3fzhi2lyyr3g8dxqfajkb93f68m1b38jp"; depends=[lavaan lme4 MASS PearsonDS]; }; + WebPower = derive2 { name="WebPower"; version="0.6"; sha256="1gw6191v9sgycis3vyjznaaiyhmp0j23h9k8g8adchpyss7017ab"; depends=[lavaan lme4 MASS PearsonDS]; }; WeibullFit = derive2 { name="WeibullFit"; version="0.1.0"; sha256="1a80gcqbmvb1rz2dr2syy16wn6ixjn6l40gayys9zy8302hky9ir"; depends=[e1071 FAdist glue kSamples mixdist optimx R_methodsS3 R_oo sqldf xtable]; }; - WeibullR = derive2 { name="WeibullR"; version="1.0.12"; sha256="0rj4q9hd49b914lz8q1d8n96xrl0h29avn95aigb3z7f8knf7g9g"; depends=[Rcpp RcppArmadillo]; }; + WeibullR = derive2 { name="WeibullR"; version="1.1"; sha256="09b8rjc1k80d6k01vppayswmkdiqmvfqfsw812b5000kk1zng2sm"; depends=[Rcpp RcppArmadillo]; }; WeightIt = derive2 { name="WeightIt"; version="0.12.0"; sha256="1x71ifvxl1zn1iaapfz8sscag2h4yim3ycqiink02sy3sfl0hj4n"; depends=[backports cobalt crayon ggplot2]; }; WeightSVM = derive2 { name="WeightSVM"; version="1.7-5"; sha256="02l2iz4p09dmaybp75a4z2lzq3h4dr03xpnr33m7r280lkimz2fx"; depends=[]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; @@ -5329,9 +5525,9 @@ in with self; { WgtEff = derive2 { name="WgtEff"; version="0.1.2"; sha256="1z8pndv43ssgmzldwaq0088lmf1g2mkmrbmzyaismcpngn9fqxsk"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-10"; sha256="19w5qw123iahrx96379lrx8i7v3x2ck5dhklf58iw0dmj4pfy2kg"; depends=[lpSolve pbmcapply]; }; WhiteStripe = derive2 { name="WhiteStripe"; version="2.4.0"; sha256="08lywd8jwx6cw7dqm7zxj291gifacymlk8ikjad9aw2f9jm6kap0"; depends=[mgcv neurobase oro_nifti]; }; - WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; + WienR = derive2 { name="WienR"; version="0.2-2"; sha256="0478fbhh8h175wkz6bigxccdrq2lv5kx7zfkgkk80rwj36zm7882"; depends=[]; }; WikidataQueryServiceR = derive2 { name="WikidataQueryServiceR"; version="1.0.0"; sha256="1bl1nbhbmss8cj9ni7plsjs996n4rwqv6h8bh1zj4whs8z4fw50f"; depends=[dplyr httr jsonlite purrr ratelimitr readr rex WikipediR]; }; - WikidataR = derive2 { name="WikidataR"; version="1.4.0"; sha256="0ajbizsyk5a7fgbfn26qydxpp5d8qfnlcwbslxrrn913f0yxbcb4"; depends=[httr jsonlite WikipediR]; }; + WikidataR = derive2 { name="WikidataR"; version="2.3.1"; sha256="1nmj1qi2v1a9mg74k9603i4dva9fcby6wczs7sgaw2qw1hb9sd6x"; depends=[crayon dplyr Hmisc httr jsonlite pbapply progress readr stringr tibble WikidataQueryServiceR WikipediR]; }; WikipediR = derive2 { name="WikipediR"; version="1.5.0"; sha256="1w4ggq42vlq7zbrz3v9ripz9yscbd8m8as60q7cplpxn9zqfdl7q"; depends=[httr jsonlite]; }; WikipediaR = derive2 { name="WikipediaR"; version="1.1"; sha256="0fxk247jb82g0f3nmwraa4kvdpjxy5s4dcyzj9vkjw2lq8by3l0h"; depends=[httr XML]; }; WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; }; @@ -5342,7 +5538,7 @@ in with self; { WordOfMouth = derive2 { name="WordOfMouth"; version="1.0.0"; sha256="1ir928rv0xk27arca8bzsdxjvmrkd0azy4ijwnaziqrrm5dpiasj"; depends=[LambertW]; }; WordPools = derive2 { name="WordPools"; version="1.1-1"; sha256="081qnsq7wn1vczgf6ipz8wjmyg4vwhj1s5nrzh0dw4p9yz28dxv2"; depends=[]; }; WordR = derive2 { name="WordR"; version="0.3.1"; sha256="17g8v3xhdy57y0b95zrakhi0zamqi35v0zcmjpy47xyqyk4b2grs"; depends=[dplyr flextable officer]; }; - WorldFlora = derive2 { name="WorldFlora"; version="1.7"; sha256="0vs0g5dg19kn4r7d6j5hbvqwp8fhyax5wkwqs0wjmcln9xidqnjg"; depends=[]; }; + WorldFlora = derive2 { name="WorldFlora"; version="1.9"; sha256="1v3gpwkygn0b248fd7ghxcqzymdb50snlh4bgrr9j3cp04y8x91f"; depends=[]; }; WrightMap = derive2 { name="WrightMap"; version="1.2.3"; sha256="0i84xkd1agyp45r84zsk8vvc02ln8qhxvl4n72xjqib12b38kqzl"; depends=[]; }; WriteXLS = derive2 { name="WriteXLS"; version="6.3.0"; sha256="0ssjdv7vr66sl1yfg0l38xddrvrfzhf7vdq342izc22bprx9h78b"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="1.0.1"; sha256="0iq1lc1b22zdvclkr4yivxxf8z5mdxik7lx9r3b38h2qy2rckqb2"; depends=[dplyr httr jsonlite]; }; @@ -5350,10 +5546,11 @@ in with self; { XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; XICOR = derive2 { name="XICOR"; version="0.3.3"; sha256="0xhb58bk3r8spd8ah3r7568np27nlrc18cswcsgavaikjpfda9vr"; depends=[psychTools]; }; XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; }; - XLConnect = derive2 { name="XLConnect"; version="1.0.3"; sha256="07q6h5z98l3n83r892lxfv96sznyzvlr2i37laq56yhh1cwii036"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.99-0.6"; sha256="0qibvacbfm7gl41ylway3vdyi1qbpa211d48rg3k5i30d48rbf58"; depends=[]; }; + XLConnect = derive2 { name="XLConnect"; version="1.0.4"; sha256="1p2sff1hrlsy9sps7bdlsvcg7gf9ldaz4ab4pn1r9mhr98sn163s"; depends=[rJava]; }; + XML = derive2 { name="XML"; version="3.99-0.8"; sha256="0l3bsgqw4bicv3sl2bfag7p4rh1y2pcyg0ajr73kkbg85qf6j7q8"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; + XPolaris = derive2 { name="XPolaris"; version="1.0.2"; sha256="1l05svscgkv9bzkawi2kp9zhchrhxxma3271b828j34pkrnnmq5m"; depends=[curl dplyr ggplot2 httr magrittr purrr raster sf tidyr]; }; XR = derive2 { name="XR"; version="0.7.2"; sha256="0j8rkjw9y7mb0yj24nlisfd84148pnnakz8i2y35y2b8gmh5zhvz"; depends=[jsonlite]; }; XRJulia = derive2 { name="XRJulia"; version="0.9.0"; sha256="0s3g6fkam6hj03mxvw75nzsq3zvz84b71jhrw3v64mdngazdv7zm"; depends=[XR]; }; XRPython = derive2 { name="XRPython"; version="0.8"; sha256="0alg33spiaqf3jwg1qn543nxvbfaqv8gvf5px3grhbgrcmi5mcmj"; depends=[reticulate XR]; }; @@ -5375,9 +5572,9 @@ in with self; { ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; ZIM = derive2 { name="ZIM"; version="1.1.0"; sha256="0scyfjn4ilsvha3x41c3b8bcfi31hlhwm77wn2a8hj5dsvnnmzig"; depends=[MASS]; }; ZIPFA = derive2 { name="ZIPFA"; version="0.8.1"; sha256="134pkdn4slhiv27rdkkmh2z7xch30ns0jhzxgd7r05bky0z1iri1"; depends=[doParallel foreach Matrix optimx trustOptim]; }; - ZIprop = derive2 { name="ZIprop"; version="0.1.0"; sha256="1lmsfy7cm52wq1xmvz8by2955wwg9nb67q9lnl52qq8yvnjf971a"; depends=[data_table purrr rgenoud]; }; + ZIprop = derive2 { name="ZIprop"; version="0.1.1"; sha256="1gvf6z7mx543a0hiqcknwhkplqa3mfmw3swi8n9vma10bqmgysx7"; depends=[data_table purrr rgenoud]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; - ZVCV = derive2 { name="ZVCV"; version="2.1.0"; sha256="0np6h6x74kz1x13wmbkkm1wq43d8bnn2khzjc80prqdi6n0m9v8r"; depends=[abind BH dplyr glmnet magrittr mvtnorm Rcpp RcppArmadillo Rlinsolve]; }; + ZVCV = derive2 { name="ZVCV"; version="2.1.1"; sha256="0gc76j9i8fkm2v638nyzzb1qxl4zmapbspkkaffb8gi5qyjja448"; depends=[abind BH dplyr glmnet magrittr mvtnorm Rcpp RcppArmadillo Rlinsolve]; }; ZeBook = derive2 { name="ZeBook"; version="1.1"; sha256="0v98kbz9njjdx60x9dn8hl8mc6x19i5knjyg2gkwfd667yy1rkl6"; depends=[deSolve triangle]; }; Zelig = derive2 { name="Zelig"; version="5.1.7"; sha256="1x1zcmlhbbzxbb0y91ynz50nfhpki913lnmhcpmlds7drcbbirnk"; depends=[AER Amelia coda dplyr Formula geepack jsonlite MASS MatchIt maxLik MCMCpack quantreg sandwich survey survival VGAM]; }; ZillowR = derive2 { name="ZillowR"; version="0.1.0"; sha256="1wrr58p76ps29fqzzwgfvfibxrvc72p2yzs5kc2rv1yxzzcpyxvb"; depends=[RCurl XML]; }; @@ -5386,13 +5583,15 @@ in with self; { aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aGE = derive2 { name="aGE"; version="0.0.9"; sha256="17niwni6sd2mdvhskq6vfwplynh67hwq9ijrlgjvhkcslpb2ilp3"; depends=[MASS nlme survey]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.6"; sha256="0kphpvhz36859f5l0k8mbf59g9871mynbs4ybdi0h5nm2cdjy9vx"; depends=[bio3d caret data_table lattice plyr randomForest reshape2 ROCR seqinr]; }; + aMNLFA = derive2 { name="aMNLFA"; version="1.0.0"; sha256="1wjv4ka683asj5j4amymgbc56qn136nkyjfbb7szs0gfp1jf1qig"; depends=[devtools dplyr ggplot2 gridExtra MplusAutomation plyr reshape2 stringr]; }; aPCoA = derive2 { name="aPCoA"; version="1.2"; sha256="0b5fqxay918if5pfd6xgbzir5myivc3jar2p2is8azrykrr1v2cr"; depends=[ape car cluster randomcoloR vegan]; }; aRbs = derive2 { name="aRbs"; version="0.1.3"; sha256="19s4x2w036xllrsarapmp8rvyxcsky82k4h9mfr2rbhdfid6h1f3"; depends=[crayon data_table dlstats dplyr DT ggplot2 lubridate progress purrr rvest shiny shinyBS shinycssloaders shinydashboard stringr xml2]; }; aRchi = derive2 { name="aRchi"; version="1.0.5"; sha256="1sn321d2qh7vvwfbr62lg3c5ggg8df0w0q6mwcg5pr3jqhiif076"; depends=[circular data_table DiceKriging dplyr FNN gtools lidR pkgcond plyr progress rgl stringr]; }; aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.1"; sha256="0ghg43rd6bnv4jp8pkpd1ixp5l6kq5pr0mxq61q24s24g0m3s64p"; depends=[]; }; + aRtsy = derive2 { name="aRtsy"; version="0.1.2"; sha256="08qfh2gdhc67j4x8g56i6i6iqz901rdyhld021795h70ka3rdr15"; depends=[dplyr e1071 ggplot2 kknn randomForest Rcpp RcppArmadillo]; }; aRxiv = derive2 { name="aRxiv"; version="0.5.19"; sha256="0rik0jkh1xi9fizzw46xmcw139g6nla072p7f8jgvzbhp7k58ba2"; depends=[httr XML]; }; aSPC = derive2 { name="aSPC"; version="0.1.2"; sha256="1q301rw7dax5v58srg4jlcam1qq2igkaj7kg8wlnlml0hsck4c4a"; depends=[energy mvtnorm]; }; - aSPU = derive2 { name="aSPU"; version="1.49"; sha256="1crig9dps1fgkl78hp9mjqaahj7d0q772xsppskxa32pcz2f0sin"; depends=[fields gee MASS matrixStats mvtnorm]; }; + aSPU = derive2 { name="aSPU"; version="1.50"; sha256="0rh21dj5913nxhdndqfhxvm6mvwnacraf7l3bac09awm7cfhk511"; depends=[fields gee MASS matrixStats mvtnorm]; }; aTSA = derive2 { name="aTSA"; version="3.1.2"; sha256="1p3spas0sxj08hkb8p6k2fy64w86prlw1hbnrqnrklr0hnkg2g54"; depends=[]; }; aVirtualTwins = derive2 { name="aVirtualTwins"; version="1.0.1"; sha256="1jg19ns3mxfycc11i2c152d83n4kqz3dd6d269sijnxrw80kzjki"; depends=[party randomForest rpart]; }; aaSEA = derive2 { name="aaSEA"; version="1.1.0"; sha256="0him4r8qyp0xssgrmdxjs45yn4d28h5anv4jyxxbbs9phb0m6j3h"; depends=[Bios2cor DT Hmisc magrittr networkD3 plotly seqinr shiny shinydashboard]; }; @@ -5407,20 +5606,24 @@ in with self; { abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abdiv = derive2 { name="abdiv"; version="0.2.0"; sha256="053l94br8sdy30078ssncq5i5zvdxa3m72ymbwbh0cm3zmsljj29"; depends=[ape]; }; abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; }; - abess = derive2 { name="abess"; version="0.1.0"; sha256="0cbxydhvrzv9hjacc7gpksfpfkg87wx4phpy36xbfiasx0gr7gpd"; depends=[MASS Matrix Rcpp RcppEigen]; }; + abess = derive2 { name="abess"; version="0.3.0"; sha256="10msadccqwq1mb27xqx44969wf2fqjxf9l3016smxlyma4dfr3j5"; depends=[MASS Matrix Rcpp RcppEigen]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; + abglasso = derive2 { name="abglasso"; version="0.1.1"; sha256="0h8p912l0202wyr5vjsbzw5mr70m56ab39wv833g6c4c3187479y"; depends=[MASS pracma statmod]; }; abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; abjutils = derive2 { name="abjutils"; version="0.3.1"; sha256="18mmlkqsrjfclk8islfjdsp8sbw6dpjj5x45kqilxdiss69gg5zd"; depends=[dplyr magrittr purrr rlang rstudioapi stringi stringr tidyr]; }; + abmR = derive2 { name="abmR"; version="1.0.2"; sha256="150xzdclnrynv493l5wzg1hjrpssajr3w9l7zhzwp7sdnk1r7dpq"; depends=[geosphere ggplot2 googledrive gstat gtsummary kableExtra purrr raster rgdal rgeos rnaturalearth rnaturalearthdata sf sp swfscMisc table1 tmap]; }; abn = derive2 { name="abn"; version="2.5-0"; sha256="1fqmhw0mhdl6az1gpg0byvx5snhz1pl3fqikhyfjcjrc9xbsq8yw"; depends=[lme4 nnet Rcpp RcppArmadillo Rgraphviz rjags]; }; abnormality = derive2 { name="abnormality"; version="0.1.0"; sha256="1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"; depends=[MASS Matrix]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; + abstr = derive2 { name="abstr"; version="0.3.0"; sha256="1sc6plvradvxxxysa6a34qbd01wdlpdjngkbq6divj0xxbm5wrls"; depends=[jsonlite lwgeom magrittr od sf stplanr tibble tidyr]; }; abstractr = derive2 { name="abstractr"; version="0.1.0"; sha256="1ymwp7syrynwd4i8aj2x5n8jdi9d96fjzl6jb09n0bnr5fgl7vig"; depends=[colourpicker emojifont ggplot2 gridExtra rintrojs shiny shinythemes]; }; abtest = derive2 { name="abtest"; version="0.2.2"; sha256="1ak0m4jd1grriwg4pn3aqf1468qma6rjn5kqjh8izx7zl29jd07v"; depends=[Matrix mvtnorm plotrix qgam RColorBrewer Rcpp sn truncnorm]; }; + academictwitteR = derive2 { name="academictwitteR"; version="0.2.1"; sha256="1xwkzspb1j87i8zy1r7gjg22cb8ay87v3l15nnvapzc9sg0dk1vp"; depends=[dplyr httr jsonlite lubridate magrittr purrr rlang tibble tidyr tidyselect usethis]; }; acc = derive2 { name="acc"; version="1.3.3"; sha256="1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m"; depends=[circlize DBI ggplot2 iterators mhsmm nleqslv PhysicalActivity plyr R_utils Rcpp RcppArmadillo RSQLite zoo]; }; accSDA = derive2 { name="accSDA"; version="1.0.0"; sha256="0sgxy5y8kkc1n35657kifwfjsba7y5m1vbr7rkk5lmbpkzahqm61"; depends=[ggplot2 ggthemes gridExtra MASS rARPACK sparseLDA]; }; accelerometry = derive2 { name="accelerometry"; version="3.1.2"; sha256="13xzrwhr4i1nj9c8vrmfdg2rmrc8n446iihcyxmy99sm99hpzyip"; depends=[dvmisc Rcpp]; }; accelmissing = derive2 { name="accelmissing"; version="1.4"; sha256="1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"; depends=[mice pscl]; }; - accept = derive2 { name="accept"; version="0.7.1"; sha256="0pn8q0jsi0nb2mm2kv6sjczflflshhy55y7nqqnk70yx9f6wm83y"; depends=[dplyr extrafont MASS plotly stringr viridis]; }; + accept = derive2 { name="accept"; version="0.8.3"; sha256="0qn4lm6bk0z2iijwsfbymx1c9y39988fw124ncgmlrgw5kv80b7x"; depends=[dplyr reldist]; }; accrual = derive2 { name="accrual"; version="1.3"; sha256="11clm9s5c5518nmp6hd6pjnp0s28y92b2i2x0xgj4j5g816p4j3z"; depends=[fgui SMPracticals tcltk2]; }; accucor = derive2 { name="accucor"; version="0.2.4"; sha256="1vyppzskd5bw4mb0z8ilzh0j7jf00jr5wk5mykv7iwibwlscm5xx"; depends=[CHNOSZ dplyr gsubfn nnls readr readxl rlang stringr tibble writexl]; }; ace2fastq = derive2 { name="ace2fastq"; version="0.6.0"; sha256="09kk3yyqnr2xp820g0p3aai9a21figigjr9lxkr3zjq2d8gzwfic"; depends=[stringr]; }; @@ -5429,7 +5632,7 @@ in with self; { acepack = derive2 { name="acepack"; version="1.4.1"; sha256="1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2"; depends=[]; }; acfMPeriod = derive2 { name="acfMPeriod"; version="1.0.0"; sha256="1yww8isfrbs2v9s94hx7p2imyszcgadwafdgpj438n2ik0q6p9d5"; depends=[MASS]; }; acid = derive2 { name="acid"; version="1.1"; sha256="030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd"; depends=[gamlss gamlss_dist Hmisc]; }; - acled_api = derive2 { name="acled.api"; version="1.1.3"; sha256="15pcxl8vqh9yd4pqpjm8wj555spdpgz44ghsqwxg54355539250k"; depends=[httr jsonlite]; }; + acled_api = derive2 { name="acled.api"; version="1.1.4"; sha256="115cyp8x576dkkfbhg41hklwjvkj6v1cxrq8xcp9vcry4njaf6vi"; depends=[httr jsonlite]; }; acmeR = derive2 { name="acmeR"; version="1.1.0"; sha256="000b2hqlhj93958nddw0fqb15ahigs08najv2miivym046x04mf7"; depends=[foreign]; }; acnr = derive2 { name="acnr"; version="1.0.0"; sha256="087hq4i7jp67ba2finzsqjfnqbiprl33na6ryjv9zqzsdawj9cym"; depends=[]; }; acopula = derive2 { name="acopula"; version="0.9.3"; sha256="0vvbbw8pfs9jwfz5c57lw48pr0qj661r0ys007q6zf9jmlrhx1ln"; depends=[]; }; @@ -5439,23 +5642,24 @@ in with self; { acs = derive2 { name="acs"; version="2.1.4"; sha256="0ajw9rf8l8akcvgqvbxjvryc6wjx74521xyxswz2b0bky3m6kah5"; depends=[httr plyr stringr XML]; }; acss = derive2 { name="acss"; version="0.2-5"; sha256="0cqa60544f58l5qd7h6xmsir40b9hqnq6pqgd5hfx2j2l5n7qhmk"; depends=[acss_data zoo]; }; acss_data = derive2 { name="acss.data"; version="1.0"; sha256="09kl4179ipr8bq19g89xcdi1xxs397zcx5cvgp6viy8gn687ilgv"; depends=[]; }; - act = derive2 { name="act"; version="1.0.2"; sha256="15l7wqayf3h5qlsinbzhyvcq8l3mgspjf1qblbw0pwr8zk2sagbd"; depends=[openxlsx progress stringi stringr textutils XML xml2]; }; + act = derive2 { name="act"; version="1.1.0"; sha256="1zpnfszxh56cpcaynxnlkxq399y2d1i794glwddlc3fhgksp3xcc"; depends=[openxlsx progress stringi stringr textutils XML xml2]; }; actel = derive2 { name="actel"; version="1.2.1"; sha256="10gv6vc921ma6ckck9807j3j7z0m8kalwv5aj8xg6i2yqnia2zgs"; depends=[circular data_table DiagrammeR DiagrammeRsvg fasttime ggplot2 knitr readr reshape2 rmarkdown rsvg scales stringi stringr svglite]; }; activPAL = derive2 { name="activPAL"; version="0.1.3"; sha256="1h6hp5z89ji73gdzxy1dgbfwjysiy5lvcqh90xagpb7sa7ahs3na"; depends=[devtools dplyr ggplot2 lubridate magrittr tidyr]; }; activatr = derive2 { name="activatr"; version="0.1.0"; sha256="0c0sn0b5w1k7kgrx8b6vanamlxsr9nqvkwhm0d8imghq8wl90h43"; depends=[dplyr geosphere ggmap glue httr lubridate magrittr rlang tibble timetk xml2]; }; activegp = derive2 { name="activegp"; version="1.0.5"; sha256="065swmmrcwkvnm5a6rhg4g4agbsgrzjfpkwyr649wr13d07yn291"; depends=[hetGP lhs numDeriv Rcpp RcppArmadillo]; }; activity = derive2 { name="activity"; version="1.3.1"; sha256="1wn2a0hx7wfr2jyj1b772w5fgl6bcqkkw8cybais2s1wyjx8kjr5"; depends=[circular insol pbapply]; }; activityCounts = derive2 { name="activityCounts"; version="0.1.2"; sha256="0zgxr2sk3a8kmygfxx1p5hnrfwdkxx7php6jlrhm8wv6052ck8jz"; depends=[lubridate magrittr seewave signal tibble]; }; - activityGCMM = derive2 { name="activityGCMM"; version="1.0.0"; sha256="0wpsr3zjgizcv789akws4mf05shxr7g0jm0bk7gzf02gxrj0kv1w"; depends=[circular mclust overlap runjags]; }; + activityGCMM = derive2 { name="activityGCMM"; version="1.1.1"; sha256="0r11z61h8fs5dcm3yfr2njbrbh4pv7xlbqx5zngmrknhv407498z"; depends=[circular mclust overlap runjags]; }; actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; }; - actuar = derive2 { name="actuar"; version="3.1-2"; sha256="0gaqm8bkjly2b1jkr1nqnxlp5vqvfpj0a4jd70jv4f9ndlif676y"; depends=[expint]; }; + actuar = derive2 { name="actuar"; version="3.1-4"; sha256="0m9b4787a866cddf1skjz6634237dvg1i5qyqss4sgvcrbmx3hw0"; depends=[expint]; }; actuaryr = derive2 { name="actuaryr"; version="1.1.1"; sha256="08dzn565ax2l2hrn2m32k6magjbskybywl0hsgkg11nrjvkznwnx"; depends=[crayon dplyr lubridate magrittr purrr tibble]; }; - acumos = derive2 { name="acumos"; version="0.4-1"; sha256="0ddy8gdpm5kapvlybmjd62pxbqa5lkj6zj2qqsmp63cgj3n6yjq2"; depends=[httr jsonlite RestRserve RProtoBuf Rserve yaml]; }; + acumos = derive2 { name="acumos"; version="0.4-4"; sha256="15i4xbcdk5vxjrgac32zh4439v0vmabnw3jvsmxiipap5frp7rpi"; depends=[httr jsonlite RestRserve RProtoBuf Rserve yaml]; }; ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; }; adagio = derive2 { name="adagio"; version="0.8.4"; sha256="0ihv05402iq003m0338f85pnqnlnrmx0pf1mg8cz9sgi5h98mbnl"; depends=[lpSolve]; }; adamethods = derive2 { name="adamethods"; version="1.2.1"; sha256="150awbd3skb1mqca18bqjykhyycqw8crviw66s6qrcnmcsbk77pj"; depends=[Anthropometry archetypes FNN foreach nnls tolerance univOutl]; }; - adapt4pv = derive2 { name="adapt4pv"; version="0.1.0"; sha256="0j0vdil277y035bqff3kwwrimjsv1pzfzj6qshyj7xh80dj6qsz8"; depends=[doParallel foreach glmnet Matrix speedglm xgboost]; }; + adapt4pv = derive2 { name="adapt4pv"; version="0.2-1"; sha256="0kl7fh2nmc1kb0hxfxg6ml1a2ygi5b8zzfb4mv29qszlhsmpjldd"; depends=[doParallel foreach glmnet Matrix speedglm xgboost]; }; + adaptDiag = derive2 { name="adaptDiag"; version="0.1.0"; sha256="02xpphdhvryc06yji89mn7m2djgkpy19ph4sd52rhfsma7xn6hyf"; depends=[doParallel extraDistr foreach pbmcapply]; }; adaptMCMC = derive2 { name="adaptMCMC"; version="1.4"; sha256="0yydliqhkz1y8lm4sb2biikbk8wmcyfqmamhm059843yk46nr6an"; depends=[coda Matrix ramcmc]; }; adaptMT = derive2 { name="adaptMT"; version="1.0.0"; sha256="1yllz1zd4cryf5bj8b2lcrj6zl79yjkllyh9p02ikryy5qmg419b"; depends=[]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; @@ -5470,39 +5674,41 @@ in with self; { addinsJoaoMelo = derive2 { name="addinsJoaoMelo"; version="0.1.0"; sha256="1slx9vfcpb468asvgcj0vh7djc5rndzdpcp96qmnis77fx67xj5s"; depends=[dplyr purrr rstudioapi stringr]; }; addinsOutline = derive2 { name="addinsOutline"; version="0.1.6"; sha256="125qfqbpv5xflw8qlyh8m3iyd6biyp3arls3z7y8bqkbghifl730"; depends=[dplyr DT fs miniUI rmarkdown rstudioapi shiny shinyFiles stringr tibble yaml]; }; addinslist = derive2 { name="addinslist"; version="0.4.0"; sha256="0dg91lcb2xgsg6sim9fi9m2p203g2dp5bm5q7k0hy084057c22a5"; depends=[curl DT miniUI rappdirs remotes rmarkdown rvest shiny shinyjs xml2]; }; + additive = derive2 { name="additive"; version="0.0.2"; sha256="1a69w7rmrxs0qi4vsqp8bz3rv2iamz9fxcn5ab66f5h3j0qdjf7l"; depends=[dplyr mgcv parsnip purrr rlang tibble]; }; additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; - ade4 = derive2 { name="ade4"; version="1.7-16"; sha256="142m70im8yd4q01q7z02y3ia0f66yh4ikdznv0ps6c7yyigs5mwv"; depends=[MASS pixmap progress sp]; }; + ade4 = derive2 { name="ade4"; version="1.7-18"; sha256="09f5kh2mwygqpnvf53k0r54k0cvaafxm9x4nm819gwv05k2g9dpc"; depends=[MASS pixmap sp]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.3-1"; sha256="1y0f62n8iv002ayd1nyl3bmszw558niwnfzjpvk0a7cbvfdyvwcg"; depends=[ade4 adegraphics lattice]; }; - adegenet = derive2 { name="adegenet"; version="2.1.3"; sha256="1ipnawi0qfd4rfwj37igvh36x1a9d8x4n7xynn1jcr12rd713407"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; - adegraphics = derive2 { name="adegraphics"; version="1.0-15"; sha256="12k77x6vnjz9s9dvz1r81ajqcl1nh9g33r7dymaqk2cs5q3wvfw7"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; + adea = derive2 { name="adea"; version="1.1.6"; sha256="1hx0s33bwdln4hhbx901bb61r6p770na0ycd6raj2qqnc1292v9a"; depends=[Benchmarking combinat knitr lpSolveAPI rmarkdown]; }; + adegenet = derive2 { name="adegenet"; version="2.1.4"; sha256="0sxbw5l92xmkazndxbqaa2cxmgk8bqzzbk77q9li850s2i1fdssp"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; + adegraphics = derive2 { name="adegraphics"; version="1.0-16"; sha256="0fpch8mffac68b64gh8jah8k9zcg8pphi38i9ddw5qggmvlrr9bv"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.19"; sha256="1zmsvv651l13pyc1f2jhmnzcv1a620mb7y3gmi7sdfh7jgms3g76"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.15"; sha256="1qhdwyjic4q24kk0pwrd0r8vdg5clv4g1hbdq07rl71jbcscdhvz"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.25"; sha256="1v83iw9argh11fi47hlb8ykigd8xh70hww3i4j8yrzfqwcr9aj4p"; depends=[ade4 adehabitatMA CircStats sp]; }; adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.14"; sha256="0lfqg9g0wpq70md35b7gdgav3lliaxv8c8i13j3k0q436ids68iy"; depends=[filehash sp]; }; adephylo = derive2 { name="adephylo"; version="1.1-11"; sha256="06pnrycc7562h17gxbli935289a48na3p4vpb2w96i5cbrjg4jqm"; depends=[ade4 adegenet ape phylobase]; }; - adepro = derive2 { name="adepro"; version="3.0.0"; sha256="0dx57kypg3hqppxpw4aqldnlmfkvxc1z60j3kw78zjm7vam43jcz"; depends=[audio Cairo dplyr gclus haven jsonlite MASS readr rlang seriation shape shiny shinyBS shinyjs shinyWidgets TeachingDemos tidyr V8]; }; + adepro = derive2 { name="adepro"; version="3.2.0"; sha256="0sw42yld4bjgfiqm957ply605zsj66mmwvkzi73hsbkk31w1k5fb"; depends=[audio Cairo dplyr gclus haven jsonlite MASS readr rlang seriation shape shiny shinyBS shinyjs shinyWidgets TeachingDemos tidyr V8]; }; adept = derive2 { name="adept"; version="1.2"; sha256="1dpfmfnqzci6p7wqwpp8y0cisx11r8kdsqjm85skb512n35m0i3a"; depends=[dplyr dvmisc magrittr pracma]; }; adeptdata = derive2 { name="adeptdata"; version="1.1"; sha256="0wzavbwc1slyr3wh5jkapghpa748rc86pbw5b4gcxki73r08r7j2"; depends=[]; }; adespatial = derive2 { name="adespatial"; version="0.3-14"; sha256="1gxz9jc8br34s7yfkwnbijpnix5gbsr37ihn2xjj6ypdq54pbvx2"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; - adfExplorer = derive2 { name="adfExplorer"; version="0.1.4"; sha256="11z6jm20giqmmz4dwcpa9fshvrmlmv8m0y1vg053nch05884niz2"; depends=[]; }; + adfExplorer = derive2 { name="adfExplorer"; version="0.1.6"; sha256="06sk68580i7jg9lk4jj64ns04y4q6amzsh0k7nxhfdib107yajnp"; depends=[]; }; adheRenceRX = derive2 { name="adheRenceRX"; version="1.0.0"; sha256="19kimj88dmcc8mq3s4l7pph9jz8p57gbjyn0pn5zkrcjdrwncslm"; depends=[anytime dplyr lubridate purrr Rcpp rlang tidyr]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; adimpro = derive2 { name="adimpro"; version="0.9.3"; sha256="0njw38vcdm02sni193nj10mpv7hiklpamrkjlz5bnhjxx9mvf4cl"; depends=[awsMethods]; }; - adiv = derive2 { name="adiv"; version="2.0.1"; sha256="184wgf91csafsk1x6blyv2l6m974lq1696d4i612ff7qrwbmicpv"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR phylobase phytools rgl]; }; - adjclust = derive2 { name="adjclust"; version="0.5.99"; sha256="1ij09mlmsqamvr8gmajg82qfn0l7q4x7hkavm7w42ndzjwwdmf7b"; depends=[capushe Matrix matrixStats]; }; + adiv = derive2 { name="adiv"; version="2.1"; sha256="1pg5mq7mws9skrpkl3ghrwzvklhy26dbjdv617vpgvppibym9xig"; depends=[ade4 adegraphics adephylo ape cluster FactoMineR lpSolve phylobase phytools rgl]; }; + adjclust = derive2 { name="adjclust"; version="0.6.3"; sha256="07x9zpq3j47jhf4jaddr98bb07l1l743v3ic4b30kk3rbcrpqp7p"; depends=[capushe Matrix Rcpp RcppArmadillo sparseMatrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; adlift = derive2 { name="adlift"; version="1.4-1"; sha256="14q7fnhlqvxdhnfjhdhfmadz241srplbm069a7ybbsql21cphpf3"; depends=[EbayesThresh]; }; - admisc = derive2 { name="admisc"; version="0.12"; sha256="0r3r1gm5qfm5dvhkj3lvp2bbwv5snqxqqlllvpbhl8xf9kwdn4jk"; depends=[]; }; + admisc = derive2 { name="admisc"; version="0.18"; sha256="0lvyhvdw0glr8gpfcmprh23rzj6rmw9gmgy0p5vr1rsykp82hcis"; depends=[]; }; + admix = derive2 { name="admix"; version="0.3.2"; sha256="0si2avjqw6rmv2ndsj1ppmqkafnsjx06m2h4jxfrwf2kxfp2rrn1"; depends=[fdrtool Iso latex2exp MASS orthopolynom pracma Rcpp]; }; admixr = derive2 { name="admixr"; version="0.9.1"; sha256="0wszpzs53cbnha13g2ldpq6z5ndw2v2xgrzadqkjm3hsp6akv4bl"; depends=[dplyr magrittr readr rlang stringr tibble]; }; - admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; admmDensestSubmatrix = derive2 { name="admmDensestSubmatrix"; version="0.1.0"; sha256="1a5lfm10aj6wdjibdnmffn75zvy6x69w8nqcx2i23gxg6v0xlqcl"; depends=[Rdpack]; }; adnuts = derive2 { name="adnuts"; version="1.1.2"; sha256="0nkciv5sfj3bws6kpgrnaq4ziasibaz44w64mb86zmr8420nyc1q"; depends=[ellipse ggplot2 R2admb rlang rstan snowfall]; }; adobeanalyticsr = derive2 { name="adobeanalyticsr"; version="0.1.5"; sha256="0sig63li7b8b38w9gf2xym0lklm5px89zdp8in1ybjrgpriy9v04"; depends=[assertthat dplyr ggplot2 glue httr jsonlite knitr lifecycle lubridate purrr purrrlyr rlang scales stringr tibble tidyr]; }; - adoption = derive2 { name="adoption"; version="0.6.2"; sha256="18mjhsh19bjmh27sv5fiay0xv1la0qy96v48b093f7kqfx4c21xb"; depends=[quadprog RandomFieldsUtils tkrplot]; }; - adoptr = derive2 { name="adoptr"; version="0.4.1"; sha256="1xx5mg1lhq4n5pi6wgmak2nmkfwyldkphcama5fdls03xiigy0cn"; depends=[glue nloptr]; }; + adoption = derive2 { name="adoption"; version="0.6.4"; sha256="1xjkvj1ys2xmjgswqfsrry27zyqcc9hk9khl0j4s72gcc8az8sz6"; depends=[quadprog RandomFieldsUtils tkrplot]; }; + adoptr = derive2 { name="adoptr"; version="1.0.0"; sha256="08d2fsqh5vczfr9cc8l554p6f0x85g58i5zg5j2m0chlmcispfk2"; depends=[glue nloptr]; }; adpss = derive2 { name="adpss"; version="0.1.1"; sha256="0p2gyfc4rxmms8zdsq4hjsh1njfl2s736arq8aq1am2wh1w9k5ch"; depends=[Rcpp]; }; ads = derive2 { name="ads"; version="1.5-5"; sha256="1i6cv296i5di9irmch9wg6bpxg7s026axspq0mhcwrfyqnw8xnxs"; depends=[ade4 spatstat_geom]; }; adsDataHubR = derive2 { name="adsDataHubR"; version="0.1.1"; sha256="19csivbg3f0g2r11l7jrciqq2lhg50km7qv29xfs6ba5cf678hb9"; depends=[httr jsonlite lubridate]; }; @@ -5511,40 +5717,46 @@ in with self; { adwave = derive2 { name="adwave"; version="1.3"; sha256="11iy50ng0zxvwsvdsvx262j8zgqaai308lp5is47az7xzvk57mx7"; depends=[waveslim]; }; adwordsR = derive2 { name="adwordsR"; version="0.3.1"; sha256="1w5qg4psm8pj89f09pz7in8zkafaimik1n6hx29y55jpmbxbk2gn"; depends=[RCurl rjson]; }; aemo = derive2 { name="aemo"; version="0.3.0"; sha256="108scwyf0dyvn969cks3ikbj2pf2g4dw051asahx26pl0ggw7ijw"; depends=[assertthat dplyr lubridate stringr]; }; - afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; }; afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; }; - afex = derive2 { name="afex"; version="0.28-1"; sha256="0blwqr5ni3psav1dcdmhfi4jy3b4scm5njimqfpr1d81zadvgc6g"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; + afdx = derive2 { name="afdx"; version="1.1.1"; sha256="1654vxakdd11b5zhwy1vcv127xk5rifan6fs1k6w1qsk74j4drqv"; depends=[dplyr magrittr maxLik tidyr]; }; + afex = derive2 { name="afex"; version="1.0-1"; sha256="1k04n6gwk2n8kg0l3yk5j3wrqgkv5f6w04yjpif9y451hx5w7svg"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; + affinity = derive2 { name="affinity"; version="0.2.5"; sha256="0nfh3g8nifv5773pihgzxh62wa837i2dk1kgf15z28cb5xfj2y8h"; depends=[raster reproj]; }; affinitymatrix = derive2 { name="affinitymatrix"; version="0.1.0"; sha256="10i7wzl4xiphj5f466ga7c4ha3mkyqn63x1z0jyx50m0b84sggq1"; depends=[expm ggplot2 ggrepel Hmisc MASS]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; afpt = derive2 { name="afpt"; version="1.1.0.1"; sha256="0cg5cdm9nl1hs6f3j0ljpw4bkqvh3ksyj615b9nnbqs5k28lyds9"; depends=[]; }; + aftgee = derive2 { name="aftgee"; version="1.1.6"; sha256="1sq6d6zkr4whg61phz22gb5zh7wxg2il39w2g5s812i4hiipqj4r"; depends=[BB geepack MASS survival]; }; + afthd = derive2 { name="afthd"; version="0.1.0"; sha256="0s0rvl33kr0p0bkykbnns89d2q5bbxd7240lr6i7wf0dz4ammvns"; depends=[glmnet photobiology R2jags rstpm2 survival useful]; }; agRee = derive2 { name="agRee"; version="0.5-3"; sha256="1wi8jn14kpsj5z49my6fz8j6zxysddxm8svw86cnzsmnbj6mzq7x"; depends=[coda lme4 miscF R2jags]; }; aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; - aghq = derive2 { name="aghq"; version="0.1.0"; sha256="1sfyfc71m7j6ybpnwgmpk4g0dvm6i4v0pilz20j5kav9r4f6vxkj"; depends=[dplyr magrittr Matrix matrixStats mvQuad polynom purrr rlang stringr tibble tidyr tidyselect]; }; + aghq = derive2 { name="aghq"; version="0.2.1"; sha256="0c4yk2vcycxryrs0g5jnfsbwr0f2nwq660mmx3vsfsdqml2qdv5w"; depends=[Matrix mvQuad polynom rlang]; }; + aglm = derive2 { name="aglm"; version="0.4.0"; sha256="0rcyrzfi3l1k53c9qs1gfrcflnhdnri9sq6py8s6fw4wcn55kf67"; depends=[assertthat glmnet mathjaxr]; }; agop = derive2 { name="agop"; version="0.2-3"; sha256="1z90a07wzn5z4cbafwpfh3l3v1bgq9g89qbdjm51f78zynnb27dk"; depends=[]; }; agriTutorial = derive2 { name="agriTutorial"; version="0.1.5"; sha256="0c0p0bqcrnx34q5brnvgq10wkzahvgyybaz2xfmcghbdvzahd2dx"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; - agricolae = derive2 { name="agricolae"; version="1.3-3"; sha256="13hzlbm7khpz3xq0d7ijfvy4n489y97l3kzdspsqlz7rywbn7cg9"; depends=[AlgDesign cluster klaR MASS nlme]; }; + agricolae = derive2 { name="agricolae"; version="1.3-5"; sha256="0pgcpp3g7j9cnxajm98ppsqz5dx33v7xnrq0gp50flwbc0sjb0l3"; depends=[AlgDesign cluster klaR MASS nlme]; }; + agricolaeplotr = derive2 { name="agricolaeplotr"; version="0.2.2"; sha256="1xrsn9afdqzczaqam0aygm19vpgbq9aqh5b5qr9awj747sihpxjp"; depends=[agricolae ggplot2 rmarkdown]; }; agridat = derive2 { name="agridat"; version="1.18"; sha256="0r3806inanb49snnliq1k2li40f3yl73h37apngfhk0fw2d46fq1"; depends=[]; }; agriwater = derive2 { name="agriwater"; version="1.0.1"; sha256="1mssd0nxj8ayc3b2qcc7qzx93cnwnlxrnhn3rdknxc8iixkf40l8"; depends=[raster rgdal sp]; }; - agrmt = derive2 { name="agrmt"; version="1.42.4"; sha256="0kbhmla14s2jr2sg8fz16zgmqz2n8q2228ny8naar0srjqjnb3c6"; depends=[]; }; + agrmt = derive2 { name="agrmt"; version="1.42.7"; sha256="00vhwlz6vf2p3x51arxngd0vzgw8mb9fi8dq0b2lvqbpqqv6d071"; depends=[]; }; agroclim = derive2 { name="agroclim"; version="0.1.0"; sha256="16cyqplzmwziqwkicix0sr06zhc0yx615iv3hda0cxbdyf2rllk3"; depends=[abind cowplot easyNCDF ggforce ggplot2 ggpubr gtable multiApply ncdf4 plyr raster reshape sp zoo]; }; agrostab = derive2 { name="agrostab"; version="0.1.0"; sha256="0mcskv3144j594wqljzn5pwbhkxh6sb76b1c2wabzjvi61zrapiv"; depends=[dplyr ggplot2 rlang]; }; agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; }; agtboost = derive2 { name="agtboost"; version="0.9.1"; sha256="01gydh7rlsgv759y3nahm9qi8pd24x37rpzv1frwzrr5jfbajqdl"; depends=[Rcpp RcppEigen]; }; + ahMLE = derive2 { name="ahMLE"; version="1.18"; sha256="1yf8v2im13lsa6qadxws9cxvqf0fq17s27ran9lr1bbmxh84prpr"; depends=[invGauss Matrix Rcpp RcppArmadillo survival]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; ahnr = derive2 { name="ahnr"; version="0.3.1"; sha256="1g8m3q108ricfyn4fjjaihpr93xz7fm2sfzg3i0fz1n1i703jwm8"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; }; ahpsurvey = derive2 { name="ahpsurvey"; version="0.4.1"; sha256="1r7x4c318nzbx0ppm9272kfpz2bln1cafkv9irnj85nsdcravr33"; depends=[dplyr knitr magrittr randomNames Rdpack tidyr]; }; ahptopsis2n = derive2 { name="ahptopsis2n"; version="0.2.0"; sha256="0pjxchrjik0d3ydr1hjqrba1p1y9sirwjwzjkmxh2fk803c0b9la"; depends=[]; }; aiRly = derive2 { name="aiRly"; version="0.1.0"; sha256="0d3w5dwk0b3pd49zw2005rili4p3l1i3x4hzp8cf6rljr86x01cy"; depends=[httr jsonlite reshape2 tibble]; }; aiRthermo = derive2 { name="aiRthermo"; version="1.2.1"; sha256="058082qdfi1pbdgf26vbfahri1kbc8b2l816q4dq89j5aj5is0a2"; depends=[]; }; - aibd = derive2 { name="aibd"; version="0.1.8"; sha256="1pgfvz3b276y9pl6m3rghjlvhkrqp04w8gj3zzl7j446d372lm9h"; depends=[commonsMath rscala]; }; + aibd = derive2 { name="aibd"; version="0.1.9"; sha256="1ispw8y0k665fdpw1c0swmhzl596jr89lnwyq741ak6ic92s3pzz"; depends=[commonsMath rscala]; }; aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aif360 = derive2 { name="aif360"; version="0.1.0"; sha256="0r9x9q8kc9alk1j3p0y23ispcbfac89q0c043vh8dw89q267plf8"; depends=[reticulate rstudioapi]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; aimsir17 = derive2 { name="aimsir17"; version="0.0.2"; sha256="0v804maqaygqhw3y9wqap3h9vvjniqnnbsv1psjj500r2yscicxs"; depends=[tibble]; }; airGR = derive2 { name="airGR"; version="1.6.12"; sha256="1jcnjrx7pgdj1mr1vrpm0cvmh243lpgwn1h3zsbk7rjwvapr3hji"; depends=[]; }; airGRdatassim = derive2 { name="airGRdatassim"; version="0.1.3"; sha256="05c108rcj4rlzrbabai95abxhyjsrrrsgvds4zamvyzpjl64f9ps"; depends=[airGR]; }; - airGRteaching = derive2 { name="airGRteaching"; version="0.2.10.112"; sha256="0hmih733sghr2dgmvzkhj6p5cj2rz4jhc05fjw0ibvbfkxh2gh2g"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; + airGRteaching = derive2 { name="airGRteaching"; version="0.2.12"; sha256="0l6isv18fj1ka5n97nfhn7pgmvn8xpb23ry7dw22rd7rb2p63bxa"; depends=[airGR dygraphs markdown plotrix shiny shinyjs xts]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.8.2"; sha256="0z9knqdl7ihx2vph154qi1lh4s6yvlcw6kwry8k47mhh3p7pynsd"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; airportr = derive2 { name="airportr"; version="0.1.3"; sha256="1h8h0cdfqgxv8cf9hp82sx5n4a1z88qyyxicj7d2kmmybqqz2r5n"; depends=[dplyr]; }; airports = derive2 { name="airports"; version="0.1.0"; sha256="1ahfqqfcvr731hj0h7d00jd87h1adiryh42sv4mh318lk5rglm6f"; depends=[]; }; @@ -5554,17 +5766,18 @@ in with self; { ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akc = derive2 { name="akc"; version="0.9.5"; sha256="0mjqz5csckdnl9wb2lypcj907qbkvppwbzvmfcl1a06431pj8zgv"; depends=[data_table dplyr ggforce ggplot2 ggraph ggwordcloud igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; akiFlagger = derive2 { name="akiFlagger"; version="0.3.0"; sha256="08z5jvigzvl3af17dd8l6zil0s694i22x0a7xvb3n4fvg6fargz4"; depends=[data_table dplyr shiny zoo]; }; - akima = derive2 { name="akima"; version="0.6-2.1"; sha256="086q4ip6j226p8z5iqzfg551i15l5c0rnf4y4zavmpmqvwd2szz2"; depends=[sp]; }; + akima = derive2 { name="akima"; version="0.6-2.2"; sha256="0hl7ddpl6i40cmrjngs936cxlqrqsa5whbrw6fvni3pphbzwkvyy"; depends=[sp]; }; akmbiclust = derive2 { name="akmbiclust"; version="0.1.0"; sha256="19dj12vlry6f3agzrnshx2c4rpa2h7dlx2138r49jjy9sm48pyfw"; depends=[]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; akmedoids = derive2 { name="akmedoids"; version="1.3.0"; sha256="19d9fh1cygn04riwc7y7lzdncyxki9rzikf9f5m96vp0y687z2ka"; depends=[clusterCrit dplyr ggplot2 Hmisc kml signal]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; alakazam = derive2 { name="alakazam"; version="1.1.0"; sha256="0iy3b1w2yx9d5xagbdb2xxl6ydm16mszs5mvx0bw5cfxrcffd680"; depends=[airr ape Biostrings dplyr GenomicAlignments ggplot2 igraph IRanges lazyeval Matrix progress Rcpp readr rlang scales seqinr stringi tibble tidyr]; }; - albatross = derive2 { name="albatross"; version="0.3-1"; sha256="0nfyrfcgpyxvpgpw8x3y6vgkvqwzlzgianvhvcndq80a5mvfrkrx"; depends=[lattice Matrix multiway pracma]; }; + albatross = derive2 { name="albatross"; version="0.3-2"; sha256="1rwaw7809lzdv89lfq9li8jdb7pbb0wjqyiidxl7pxg7d5nxj06h"; depends=[lattice Matrix multiway pracma]; }; albopictus = derive2 { name="albopictus"; version="0.5"; sha256="0kw1agm9jqi9wl5zbx8bryngy751g3sih36rgbrx0m2170cy42d9"; depends=[]; }; ald = derive2 { name="ald"; version="1.3.1"; sha256="12nf9vakayw24clrg56fh9x85kg277iricbs8ymahkjqjnc1p3cz"; depends=[]; }; + aldvmm = derive2 { name="aldvmm"; version="0.8.4"; sha256="1dnmm3driw8ybqd10zlsaink5zh5f0pj2qqxda7y34s9shz7yqh9"; depends=[checkmate numDeriv optimr]; }; alfr = derive2 { name="alfr"; version="1.2.1"; sha256="1ldq8gvgqjjabn86hdqb6hxch8x4hvr6djv5ly4mx039dipc8jxi"; depends=[httr jsonlite magrittr stringr]; }; - alfred = derive2 { name="alfred"; version="0.1.11"; sha256="12nrmklwwbj1ndciaz4slm221ji4k2vxfgpzkcna899r01mmpwv1"; depends=[curl dplyr jsonlite lubridate magrittr rlang tibble tidyr]; }; + alfred = derive2 { name="alfred"; version="0.2.0"; sha256="1y0s6vn0piq4wnlc6v143va0qkklm67aa653lwgq926nfnjxz6as"; depends=[curl dplyr httr jsonlite lubridate magrittr rlang tibble tidyr]; }; algaeClassify = derive2 { name="algaeClassify"; version="1.2.0"; sha256="1sna5rij2ngpgqfz5cviqdbyr43xph8cbjc4vnm238n72zgg7cb6"; depends=[httr lubridate plyr RCurl rvest taxize XML xml2]; }; algo = derive2 { name="algo"; version="0.1.0"; sha256="1g18p8jyj9crkqm16y2im3r9xzqwa36javv4vi1wvsqkg31d81si"; depends=[glue htmltools jsonlite]; }; algorithmia = derive2 { name="algorithmia"; version="0.3.0"; sha256="1ccmcsyxncyv8k0fjvr5y44amygqi7qx2dy6rsy3a5pw281hllr4"; depends=[base64enc httr rjson]; }; @@ -5573,7 +5786,6 @@ in with self; { allcontributors = derive2 { name="allcontributors"; version="0.0.2"; sha256="0b9qiwp6z33fgci7np4qhsb39rzmarajsj3pa98vkmdn71bw1bxf"; depends=[cli clipr ghql git2r httr jsonlite magrittr]; }; alleHap = derive2 { name="alleHap"; version="0.9.9"; sha256="1fqrw645s3f5363p7jl3dzy8xphxdr1v6wdsjmqcqwpgvjqfr2zz"; depends=[abind]; }; allelematch = derive2 { name="allelematch"; version="2.5.1"; sha256="00117cj01psax4rjvy2nja5r2ss9l8zzjicczh46kp401i1ghmwc"; depends=[dynamicTreeCut]; }; - allelic = derive2 { name="allelic"; version="0.1"; sha256="0xs4kd3vqb5ph8kqc3lcqgirrdkz8b627pvnczvci2g0sr3cl18j"; depends=[]; }; allestimates = derive2 { name="allestimates"; version="0.2.1"; sha256="1znjzqansh2117xpnwpsw450z20q6rz91h2kg35ygssg5skk8z6q"; depends=[broom dplyr ggplot2 speedglm stringr survival tibble tidyr]; }; alluvial = derive2 { name="alluvial"; version="0.1-2"; sha256="039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"; depends=[]; }; almanac = derive2 { name="almanac"; version="0.1.1"; sha256="0qsczk74ihy7ac5c4dzd6ax5gfmr56wfnjxg396qc2c3xykb7dd5"; depends=[glue lubridate magrittr R6 rlang V8 vctrs]; }; @@ -5591,6 +5803,8 @@ in with self; { altair = derive2 { name="altair"; version="4.1.1"; sha256="0fdhv23clmfcajjdrph0m8psrh5wr2giwhydbcrap9mdgbr0rkbk"; depends=[assertthat htmlwidgets magrittr repr reticulate vegawidget]; }; altfuelr = derive2 { name="altfuelr"; version="0.1.0"; sha256="0k3f4wr9gbn5aig40xg817hrnz2lx8g4adyy18s59fs8dw03v87h"; depends=[dplyr httr jsonlite lubridate magrittr purrr stringr]; }; altmeta = derive2 { name="altmeta"; version="3.3"; sha256="1xq12hnzxh7kgv2i36xprg4lkvqfmxwz3sq4a1jlq2d5g3narvcm"; depends=[coda lme4 Matrix metafor rjags]; }; + amanida = derive2 { name="amanida"; version="0.1.0"; sha256="1z6i76b1qljw4fdaa5bbv0jhim1hyn3ysvl9ls2rglg4qzbv5bdn"; depends=[dplyr ggplot2 ggrepel kableExtra knitr magrittr readr readxl rmarkdown tibble tidyr tidyverse]; }; + amanpg = derive2 { name="amanpg"; version="0.3.1"; sha256="0c6a4ivnzh79df2g0bq59v9z1rycfn8cx0xf8vzcnn776c72awzg"; depends=[]; }; amap = derive2 { name="amap"; version="0.8-18"; sha256="0zpcb73w413na23f6giml9311jh0j0y766w2fh9i40d2h7bbvyvs"; depends=[]; }; amapGeocode = derive2 { name="amapGeocode"; version="0.6.0"; sha256="0j04hg2ks7578fiaymj295yll77xm6x5svmxx6m4n0djky8j10n1"; depends=[data_table furrr httr jsonlite magrittr sjmisc xml2]; }; amber = derive2 { name="amber"; version="1.0.3"; sha256="0kc7g5rb0wrs1id1k0qay56063gpffwvcll38983b1l3k215mxiv"; depends=[classInt doParallel foreach Hmisc latex2exp ncdf4 raster rgdal rgeos scico sp viridis xtable]; }; @@ -5603,12 +5817,12 @@ in with self; { aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; ammistability = derive2 { name="ammistability"; version="0.1.2"; sha256="0ak20y5iv1cg5y06srdlfk5qp5c463ky41l350shnqpq550azy11"; depends=[agricolae ggcorrplot ggplot2 mathjaxr Rdpack reshape2]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; - ampir = derive2 { name="ampir"; version="1.0.0"; sha256="081ah5fvfa4f2yj9zigj5b069dr8z8qs6mwb20w08wldlgcy2a5x"; depends=[caret kernlab Peptides Rcpp]; }; + ampir = derive2 { name="ampir"; version="1.1.0"; sha256="0nnsxrnq3m1frrjp3i8bhm67x6xnl0scyb67wxgm5x7b187svhfj"; depends=[caret kernlab Peptides Rcpp]; }; amt = derive2 { name="amt"; version="0.1.4"; sha256="0xdrpkirdxmni3bcqjjx8xxh3b0bllmsgc3r7h9zd7sf0p3aldhs"; depends=[checkmate circular ctmm dplyr fitdistrplus lubridate magrittr purrr raster Rcpp Rdpack rgeos rlang sf sp survival tibble tidyr]; }; anMC = derive2 { name="anMC"; version="0.2.2"; sha256="0ab215nrqn535g9ayqzvgdckhwcrij1mc1296pvlj3grn3f8rhws"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; - analogsea = derive2 { name="analogsea"; version="0.9.4"; sha256="0bhyf1b5cgg8p549yn9kdzn0vrdidy21zsc09bfqxnk58cw0hkf8"; depends=[httr jsonlite magrittr yaml]; }; - analogue = derive2 { name="analogue"; version="0.17-5"; sha256="1iq0hdblpg1yb5ciralfxq7as9zwc58237hrzm0n51yb6a9vd1vd"; depends=[brglm lattice MASS mgcv princurve vegan]; }; + analogsea = derive2 { name="analogsea"; version="1.0.0"; sha256="1xqfx2bbi6ipgcb952gmgnhf9bc6jynid2ydl8h82mvy9z727zaz"; depends=[httr jsonlite magrittr yaml]; }; + analogue = derive2 { name="analogue"; version="0.17-6"; sha256="0c5h8nnbflydv35ja1pfhyx7ifwlriwgcnrmxj5il5lvcr70y1vi"; depends=[brglm lattice MASS mgcv princurve vegan]; }; analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; analysisPipelines = derive2 { name="analysisPipelines"; version="1.0.2"; sha256="1rxam52wrbcjrvixb35b9ha37i8a0fczby49vmgzpnrbvkc50ldx"; depends=[dplyr futile_logger ggplot2 magrittr pipeR proto purrr RCurl rlang]; }; analyz = derive2 { name="analyz"; version="1.4"; sha256="0qdh1gld2dkl0krbhm2vcqg8dfs03dn51rclgsw02554s06dlgxw"; depends=[]; }; @@ -5626,27 +5840,28 @@ in with self; { animaltracker = derive2 { name="animaltracker"; version="0.2.0"; sha256="1zv2nj4wfskz1lxfgw8l4gyrlv418drk8zl4cw55i5na6a39shcv"; depends=[dplyr forcats geosphere ggplot2 httr leaflet leaflet_extras lubridate maptools raster rgdal scales shiny shinyBS shinycssloaders shinyjs shinythemes shinyWidgets sp tibble tidyr zoo]; }; animation = derive2 { name="animation"; version="2.6"; sha256="02jv4h9hpp8niw9656r5n36kqr71jbyynxnywkkkdi0aj8w3cach"; depends=[magick]; }; animint2 = derive2 { name="animint2"; version="2020.9.18"; sha256="17gr43hyb7yx9rsa0id5ibix09sai95pknc75cf31ra72mkpym8m"; depends=[digest gtable knitr lazyeval MASS plyr reshape2 RJSONIO scales tibble]; }; - anipaths = derive2 { name="anipaths"; version="0.9.8"; sha256="02d2z236gjh40p29h86ikspnxim49c3c33r4dnf3yzns622ckm2c"; depends=[animation ggmap mgcv raster RColorBrewer scales sp]; }; + anipaths = derive2 { name="anipaths"; version="0.10.1"; sha256="14shy474795mivxvn0vyfgzwabvhxafgjazcwhz2250smjzdhw03"; depends=[animation crawl dplyr ellipse ggmap ggplot2 igraph lubridate magrittr mgcv raster RColorBrewer scales sp stringr tidyr tidyselect]; }; aniview = derive2 { name="aniview"; version="0.1.0"; sha256="1klakkmdk4xllaxd0pllvxi4396n6rz2idz55niy91mp0fhcjhwf"; depends=[htmltools jsonlite]; }; - anndata = derive2 { name="anndata"; version="0.7.5.2"; sha256="1imxi8sjff7pdjlm33jq2fpbxdgcx9y6875g28gnrkdfj21w4h8p"; depends=[assertthat R6 reticulate]; }; + anndata = derive2 { name="anndata"; version="0.7.5.3"; sha256="115v7gdilayd18hd519vzkixp2s6rvvrd1inc1i6amn7d0spy8r1"; depends=[assertthat Matrix R6 reticulate]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; anomalize = derive2 { name="anomalize"; version="0.2.2"; sha256="13ncx17hdwv7799s7y6p3wvf59dad97y8rs9p56cbd91f6jkjgs5"; depends=[cli crayon dplyr ggplot2 glue purrr rlang rstudioapi sweep tibble tibbletime tidyr timetk]; }; anomaly = derive2 { name="anomaly"; version="4.0.1"; sha256="1ska83fv82ns1vrrqwhkva10qhyhdz5lllird7dwh5a9sxxs71xh"; depends=[assertive BH cowplot dplyr ggplot2 Rcpp Rdpack reshape2 rlang robustbase]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; anovir = derive2 { name="anovir"; version="0.1.0"; sha256="1x7lvj7xchbv6siyc9miivmf0rlxrjflal4icyvbxgdr285s2s9w"; depends=[bbmle]; }; anscombiser = derive2 { name="anscombiser"; version="1.0.0"; sha256="0jpmxgr5hfyv1hcjn4h1063ch3b3xlgqv983f4f9d2ajz5i5mdwv"; depends=[]; }; - antaresEditObject = derive2 { name="antaresEditObject"; version="0.1.9"; sha256="09zmhzfdzxpp01wmdk230gff6zwgd5p2w3ppbq3a0df3f56x0hix"; depends=[antaresRead assertthat data_table whisker]; }; + antaresEditObject = derive2 { name="antaresEditObject"; version="0.2.2"; sha256="055d3147s139idgqi6zb9l716nc2x40gknhcyqcygcm5nqrxjfzs"; depends=[antaresRead assertthat data_table doParallel fs pbapply whisker]; }; antaresProcessing = derive2 { name="antaresProcessing"; version="0.18.0"; sha256="1rw7g4706g4fdx7c7magxqj71h6iwkbslmyrqfwna4irnifjmv7g"; depends=[antaresRead data_table]; }; - antaresRead = derive2 { name="antaresRead"; version="2.2.5"; sha256="10c3ql08211ylc271xk8ffnix3pzmnaylgf0ynwayp34hkgkf37h"; depends=[bit64 data_table lubridate plyr shiny stringr]; }; - antaresViz = derive2 { name="antaresViz"; version="0.15.4"; sha256="08av1gr8zw1d14mnxr791k9qfghjab24l6l35h82wv90jc5h78zr"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; + antaresRead = derive2 { name="antaresRead"; version="2.2.8"; sha256="02cpzd5iwfqmfb1ahl20apsd3n6873qxfa9f0fslbwn59w7hxm1j"; depends=[bit64 data_table doParallel jsonlite lubridate pbapply plyr shiny stringr]; }; + antaresViz = derive2 { name="antaresViz"; version="0.16"; sha256="0iczcawyj2rf0vxirkbprcsl43y62dhavw7ky50b6c2s5pi3mjzw"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; anthro = derive2 { name="anthro"; version="0.9.4"; sha256="0blsfz3ckizkg4r4i3ib6b4yh40krcy8133v32f3yc220g2g2za9"; depends=[survey]; }; anticlust = derive2 { name="anticlust"; version="0.5.6"; sha256="1f5z05p5fwfgcj4vzg6kg9vihamcdha74yyn9c04m4kydyngnm85"; depends=[Matrix RANN]; }; - antitrust = derive2 { name="antitrust"; version="0.99.14"; sha256="0mc7mgvhbfw9rp5w9vdd003mhp13pdjhrb8gybmkvan316mwygds"; depends=[BB evd MASS numDeriv]; }; + antitrust = derive2 { name="antitrust"; version="0.99.25"; sha256="0f4alzr4nmjhxwk3c6mi5vrs2i20dambpc9zfkxf04rxbcw2znvy"; depends=[BB numDeriv]; }; antiword = derive2 { name="antiword"; version="1.3"; sha256="034znb0g9wwb8gi1r3z75v3sbb4mh83qrc4y8mbfx5lbgh8zhj6j"; depends=[sys]; }; anyLib = derive2 { name="anyLib"; version="1.0.5"; sha256="1x9x58hhkkwdskmgdjv94ynh811n9w0752hh4214adl1qpn576vm"; depends=[BiocManager curl devtools httr withr]; }; anybadger = derive2 { name="anybadger"; version="0.1.0"; sha256="1aa09v5k5nlvhlir8saa5gnrq7cb1djbdc8y85cjgb3skay94hzv"; depends=[config glue magrittr purrr R6]; }; anyflights = derive2 { name="anyflights"; version="0.3.1"; sha256="08x4412xbmiisizdiby6b9xkhrlsag9hrmj681wpm6fm2bpk0q6y"; depends=[curl dplyr glue httr lubridate progress purrr readr roxygen2 stringr usethis vroom]; }; anytime = derive2 { name="anytime"; version="0.3.9"; sha256="0jjpqynai5nd7mfy1smb44356f3d5bmpxhs1i9x9jw5c959c35hh"; depends=[BH Rcpp]; }; + ao = derive2 { name="ao"; version="0.1.3"; sha256="19b8v3ys3gmgxys1z8da5vjih4s0k6rbxlnvqyd4kgd3w56lqc20"; depends=[]; }; aod = derive2 { name="aod"; version="1.3.1"; sha256="1g03ajhs6bid80i83xn3917abhymzgrydqx86wxxpkqga018hb85"; depends=[]; }; aods3 = derive2 { name="aods3"; version="0.4-1.1"; sha256="1kdmgzd5nkzm0awdjls6fc8p9hxsph9ha9k1jxbppdi4i6f0i7rv"; depends=[boot lme4]; }; aof = derive2 { name="aof"; version="0.1.2"; sha256="0552i5wvm04dq8a8y1x36sprc9cbx6k7c3bmsgqxm71dpsxajb0i"; depends=[bcpa]; }; @@ -5659,21 +5874,21 @@ in with self; { apaTables = derive2 { name="apaTables"; version="2.0.8"; sha256="0jy6x0z9ivqqkjihqhyg3fxyghqa9gs6q2bpxzjdnbcb3kq151vd"; depends=[boot broom car dplyr MBESS tibble]; }; apaText = derive2 { name="apaText"; version="0.1.1"; sha256="1r217k60w027i63nbj24b1rm37m4qf7a6iirc941s945babkxcmb"; depends=[dplyr]; }; apc = derive2 { name="apc"; version="2.0.0"; sha256="0vh6iyxm46k8sfa1xgz0y6m619snnm8s072kml5qgiiw5s7bqnpq"; depends=[AER car ChainLadder ggplot2 ISLR lattice lmtest plm plyr reshape survey]; }; - apcf = derive2 { name="apcf"; version="0.1.5"; sha256="1drhzk6v8xirjv3371nay3gz1v6wcklhywrzfqn32ibad7n31ph2"; depends=[Rcpp]; }; + apcf = derive2 { name="apcf"; version="0.1.6"; sha256="1m702y9rrhwbcl7y5f2gdmczi8bfryimckxbgqidnvbr3v084slp"; depends=[Rcpp]; }; apcluster = derive2 { name="apcluster"; version="1.4.8"; sha256="0lzf2jqm56i74wif6x5sw3j0w2qc4sni49zq2fgbl89b7lwkvchj"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; ape = derive2 { name="ape"; version="5.5"; sha256="16i9sny7j90zi0k3znfff5lpnj5naxcy1142v73zxslr9g3h3am3"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.4"; sha256="046gf4dzypl6mmq7xqkyrdasq9rsjxzsii7w4nxkbn4c40kh7bf7"; depends=[pls]; }; apex = derive2 { name="apex"; version="1.0.4"; sha256="1ddzbzpnc17yvbl5yfyp0widqlx48qwlh80xcmyzhv045s680rdk"; depends=[adegenet ape phangorn]; }; - apexcharter = derive2 { name="apexcharter"; version="0.1.8"; sha256="0mgd3i4hw5vg7lci6cwsyjpnvlw71zx57m7jjif1zm0ck70g5cfv"; depends=[ggplot2 htmlwidgets jsonlite magrittr rlang shiny]; }; + apexcharter = derive2 { name="apexcharter"; version="0.2.0"; sha256="1dlxnsfl629mrcjxfznhhw41i19pzrwmdzk2zc6rp04q621bxg6n"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr rlang shiny]; }; aphid = derive2 { name="aphid"; version="1.3.3"; sha256="1jqpn7w5sgy4k49qd9ci6yj89s55gzwl5w5ldw793mzpg6if7lfn"; depends=[kmer openssl Rcpp]; }; apisensr = derive2 { name="apisensr"; version="0.3.0"; sha256="1mis266s4m0hp34m7b7p008dvw7780r8rypgbpk7h5hgd1w5d7m0"; depends=[config episensr ggplot2 ggraph glue golem htmltools igraph rhandsontable rmarkdown shiny shinyjs shinymaterial]; }; aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; - aplot = derive2 { name="aplot"; version="0.0.6"; sha256="08kqrm9r57l8zgij897wpp428l4i50qfhp7y78r3pk5pjz37bsan"; depends=[ggplot2 magrittr patchwork]; }; + aplot = derive2 { name="aplot"; version="0.1.1"; sha256="067yzy35spvs6jbccqpmvnjilglxzda6qqlqhjv311kfvnppzsyf"; depends=[ggfun ggplot2 ggplotify magrittr patchwork yulab_utils]; }; aplpack = derive2 { name="aplpack"; version="1.3.3"; sha256="010saim43d3hr83ksi916846rh6qfbb0gvhsf5jbdx95m4bai9g3"; depends=[]; }; apng = derive2 { name="apng"; version="1.1"; sha256="0g1rs8wdcbqhyjis2r1a4d96jf0486ncnap97yjv08nk574d42wp"; depends=[bitops]; }; - apollo = derive2 { name="apollo"; version="0.2.4"; sha256="15x92hqg4l17prsc8wj04qr3kw7s69rn5wh7nna6zzbr1zwxpfls"; depends=[coda Deriv matrixStats maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB]; }; - appler = derive2 { name="appler"; version="0.1.0"; sha256="0mnpx6j275d9mj75g23jdhcpn452rql23wvfjm9wawkf9phs54lr"; depends=[glue httr jsonlite lubridate rvest xml2]; }; + apollo = derive2 { name="apollo"; version="0.2.5"; sha256="12x09fbpavvgsnx0pf7q9w9glc8hb7s8cywvm0ym05v64r1v2dca"; depends=[coda Deriv matrixStats maxLik mnormt mvtnorm numDeriv randtoolbox Rcpp RcppArmadillo RcppEigen RSGHB tibble]; }; + appler = derive2 { name="appler"; version="0.1.1"; sha256="1av4gbw11m18b8n1p4gwmn5x79pfdv4bl3w7fiziw3qvb6nj8ak5"; depends=[glue httr jsonlite lubridate rvest xml2]; }; applicable = derive2 { name="applicable"; version="0.0.1.2"; sha256="0yzfk4ajdx4l3xivf6v9vn7fqvzfma4842cvjixrng83p2v25sdq"; depends=[dplyr ggplot2 glue hardhat Matrix proxyC purrr rlang tibble tidyr tidyselect]; }; appnn = derive2 { name="appnn"; version="1.0-0"; sha256="0wkpr6lcd68wlzk6n622ab7sd99l837073czn4k56hw8bw9v68j3"; depends=[]; }; approximator = derive2 { name="approximator"; version="1.2-7"; sha256="0smqjdla9mvzy164nsb0pw0sgal3w2wnyhqidp74h0smyczrr1zw"; depends=[emulator mvtnorm]; }; @@ -5681,46 +5896,49 @@ in with self; { aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; }; apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; }; aprof = derive2 { name="aprof"; version="0.4.1"; sha256="14qclp88j4ygd4vrxxpgy2s9939wcajjsqycdzpvn64ws29sdpvh"; depends=[testthat]; }; - apsimx = derive2 { name="apsimx"; version="1.977"; sha256="0fv2f6dcbiphc0yzkklhmmkzd9m11h5ad08l9b9sqxfx1gnv0nzh"; depends=[DBI jsonlite knitr RSQLite xml2]; }; + apsimx = derive2 { name="apsimx"; version="2.0"; sha256="0qm15lgj4lf85lcf60bb3mv6vhakkz2yfw4g8kawl0nwpjsg1y8y"; depends=[DBI jsonlite knitr RSQLite xml2]; }; apsrtable = derive2 { name="apsrtable"; version="0.8-8"; sha256="1qmm89npjgqij0bh6p393wywl837lfsshp2mv9b5izh1sg2qfwvw"; depends=[]; }; apt = derive2 { name="apt"; version="3.0"; sha256="14njvpf6q34nffm3r9gqcszlabzbydsxqj0ln9nk4mv59izp8sqm"; depends=[car erer urca]; }; aptg = derive2 { name="aptg"; version="0.1.1"; sha256="0mdhgc0jrl2za3k2awm92vky2ghcssqq1x2h57ns9b17lwdrsdl4"; depends=[ape brranching phytools taxize xml2]; }; apyramid = derive2 { name="apyramid"; version="0.1.2"; sha256="0ws6dfd6v3p9rhpmf06786yl2gaw1h2n1d76a054iap8bvgyahzw"; depends=[dplyr forcats ggplot2 glue rlang scales tidyselect]; }; - aqp = derive2 { name="aqp"; version="1.29"; sha256="1g1jbq45n9v5acbzh1w11zd2wd194p0jyx8gn686df6p111ahyxp"; depends=[cluster data_table lattice plyr sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.31"; sha256="0r9dz2xwj514wrkipcpyihqzrm34yw40cml0dwfdh80dr7qf8jvp"; depends=[cluster data_table lattice plyr sp stringr]; }; + aquodom = derive2 { name="aquodom"; version="0.1.0"; sha256="1ww80pglvpyi84z6zi475y9clx2zyys0qy2g2579wmyqs4hc36p6"; depends=[cachem dplyr glue httr lubridate magrittr memoise openxlsx readr rlang stringr tibble]; }; ar_matrix = derive2 { name="ar.matrix"; version="0.1.0"; sha256="1d531hkl50szfa1q0zbp8dp1a9jli63kwvxjgc9n0ar279y47qdz"; depends=[MASS Matrix sp sparseMVN]; }; arabic2kansuji = derive2 { name="arabic2kansuji"; version="0.1.1"; sha256="0fb8qn9a7xyk2civs1s3cx61hxmkrj6pkwnfq7pbjdm2dh6xjfky"; depends=[purrr stringr]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; + arakno = derive2 { name="arakno"; version="1.1.1"; sha256="0l17h1xzd2nlq79n4g89cp6rmrk03vlnw01rja46cm1ckhyhw1by"; depends=[httr jsonlite rgbif rworldmap rworldxtra]; }; arc = derive2 { name="arc"; version="1.3"; sha256="0isfa7d26jpj004lf4f06krbfa68zyzrh5431xa63k2dykvg8c5j"; depends=[arules discretization Matrix R_utils]; }; archdata = derive2 { name="archdata"; version="1.2-1"; sha256="1dahfl9xdnqiwzdrff98x23k1dl19sfdqnv7jlg1xzgvhj1fhk0d"; depends=[]; }; archeofrag = derive2 { name="archeofrag"; version="0.7"; sha256="15bz2czjxiw0q46sbalfcqk3jacpf4zcaa8x8d6jvbsf4hib6i28"; depends=[igraph RBGL]; }; archetyper = derive2 { name="archetyper"; version="0.1.0"; sha256="1d4vz7kj7n5j81fwfxvr47if8c7fdycci6n33wf8paac0v2paqli"; depends=[bannerCommenter config feather here knitr log4r ps readr rmarkdown skimr snakecase stringr testthat tidyverse]; }; archetypes = derive2 { name="archetypes"; version="2.2-0.1"; sha256="0ibxsr173ib77gjhid91m85s8gjii4mi2w3d52q5301igv20p7r0"; depends=[modeltools nnls]; }; archiDART = derive2 { name="archiDART"; version="3.4"; sha256="1wvjlg2rwy39czf3qqh9igk9rmk9i7pxa9yl5x9yqmsagwd1av3n"; depends=[geometry gtools sp XML]; }; - archiveRetriever = derive2 { name="archiveRetriever"; version="0.0.2"; sha256="1qxj9wbx53n8cbxhh9brkflpqz2dkaqw1wvjs2g58xamhrx4x8fa"; depends=[anytime dplyr ggplot2 gridExtra httr jsonlite lubridate rvest stringr tibble tidyr xml2]; }; - archivist = derive2 { name="archivist"; version="2.3.5"; sha256="0sk16bcafgswrvwh39ysbgm6jvsg20yil4pdsg3wsp81nnsrb43k"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; + archive = derive2 { name="archive"; version="1.1.0"; sha256="1h7i5psa1s5gwq74nflfgg27af0rvshff1bln7n024cwwwyqlv0m"; depends=[cpp11 glue rlang tibble]; }; + archiveRetriever = derive2 { name="archiveRetriever"; version="0.1.0"; sha256="1pfq63db0g818vavf9syf2psqvj7xk9n243hqilf21ijgqwfh165"; depends=[anytime dplyr ggplot2 gridExtra httr jsonlite lubridate rvest stringr tibble tidyr xml2]; }; + archivist = derive2 { name="archivist"; version="2.3.6"; sha256="0q1qysack30xzxdbvvi56rk7r85hsj4ghls9r70ki7bl3rqwr4c9"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; archivist_github = derive2 { name="archivist.github"; version="0.2.6"; sha256="092fzi505vx9xbk41m86d0isxna42iflp7q2kjiqa6z1ccvim2yx"; depends=[archivist digest git2r httr jsonlite]; }; arcos = derive2 { name="arcos"; version="1.27"; sha256="02s4vpfsipww6i73lhrdawqlg01gp929n4sx6z869b12jixnq3ni"; depends=[curl dplyr httr jsonlite magrittr stringr tidyr urltools vroom]; }; - arcpullr = derive2 { name="arcpullr"; version="0.1.2"; sha256="0zhbznvfnyhj87a78p13qiqxadhswkh3v30v35kpd3my5r0w1y65"; depends=[dplyr ggplot2 httr jsonlite rlang sf tidyr]; }; - arctools = derive2 { name="arctools"; version="1.1.2"; sha256="0ncgdqcwyck3w8k7dir9lwvhmcxsal3kashbxcgq8z23s3gz96jm"; depends=[lubridate runstats]; }; + arcpullr = derive2 { name="arcpullr"; version="0.2.1"; sha256="12gr2q5ipm20clbpv1snhfff9cp2dr60m3mv0s4iibipv7fhpl4s"; depends=[dplyr ggplot2 httr jsonlite raster rlang sf tidyr]; }; + arctools = derive2 { name="arctools"; version="1.1.4"; sha256="0ldhmv2fs3gi5v5d36y8i1mbw3w4vf2h8f7avlk5zgywn46j75zf"; depends=[lubridate runstats]; }; areabiplot = derive2 { name="areabiplot"; version="1.0.0"; sha256="0izgvlg174jbr3fm3qc8zh23kfs7hn9bwd40x6vm90iivrrgdcp7"; depends=[nipals]; }; areal = derive2 { name="areal"; version="0.1.7"; sha256="1kdnf7c21g51mhf428nl5jl96cfrk5iw1npzp5rv5ys3jp2mvhhi"; depends=[dplyr glue purrr rlang sf]; }; - arealDB = derive2 { name="arealDB"; version="0.3.4"; sha256="1235j1w2gsv22k6a6zxanxvxx6fj1sifc5nkial883mpgvkbz789"; depends=[checkmate dplyr magrittr readr rlang sf stringr tabshiftr tibble tidyr tidyselect]; }; areaplot = derive2 { name="areaplot"; version="1.2.2"; sha256="0vyhf3662ppcahaw2zrxgpcxcn8fysd6lhl8vgr7cs8kl6fm4x47"; depends=[]; }; arena2r = derive2 { name="arena2r"; version="1.0.0"; sha256="14zjpglp389pldi436935fz6mgi4jdgfii1m035nsvihrms9gqkh"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinyBS shinydashboard shinyjs tidyr]; }; arenar = derive2 { name="arenar"; version="0.2.0"; sha256="08b865v7ringqzm5m4ib4nrmlyqywir6bjj7alzmg06dy7mrl9s7"; depends=[auditor DALEX fairmodels gistr iBreakDown ingredients jsonlite plumber]; }; arfima = derive2 { name="arfima"; version="1.7-0"; sha256="0kj8qv6m2fcdw8x735n8fk9cynm0jxi5v9hif0f879sxk6qkxb9y"; depends=[ltsa]; }; argo = derive2 { name="argo"; version="3.0.1"; sha256="1q7gbyk2f8vimwzdmd1mfqyaql2gyawywilwzs6g1716gbk3gd80"; depends=[boot glmnet Matrix XML xtable xts zoo]; }; + argoFloats = derive2 { name="argoFloats"; version="1.0.2"; sha256="1maaxmc249kgar678qdd3jw69aiyy8hbjrbhly6m15bf14875751"; depends=[oce]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; argonDash = derive2 { name="argonDash"; version="0.2.0"; sha256="1wykr7y5375g1nb18ynybccxmd948xrr0gdwxxqsfjf782vlgd2d"; depends=[argonR htmltools shiny]; }; argonR = derive2 { name="argonR"; version="0.2.0"; sha256="15hlvansqnky9bnq4r7xza3hb1hzylmhz8117wxz9lxa1wiky2is"; depends=[htmltools rstudioapi]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; - argparse = derive2 { name="argparse"; version="2.0.3"; sha256="1c2r417m1dxk1jhcggv3g4zax5a59k9rqs9jcs6xy2pa2333jqfj"; depends=[findpython jsonlite R6]; }; + argparse = derive2 { name="argparse"; version="2.1.1"; sha256="1k6v35g3bppcr896h4v39zh1sxxia1bxxh29xv0mhad1nvmv25j9"; depends=[findpython jsonlite R6]; }; argparser = derive2 { name="argparser"; version="0.7.1"; sha256="0xcl0ivsbc4iw8s7027q4cx68j6s5lihbby0xa9pmlv4wjmcvdr6"; depends=[]; }; ari = derive2 { name="ari"; version="0.3.5"; sha256="03w99c918jp23d0kl26vx4m7xjicpgwl5rhn9d0fsm4kvv7j87li"; depends=[hms progress purrr rmarkdown rvest text2speech tuneR webshot xml2]; }; - ariExtra = derive2 { name="ariExtra"; version="0.2.11"; sha256="1gl2r0qksfisv7h27x83b665h7016c6rlff04mgj8iwp29144lch"; depends=[ari docxtractr httr jsonlite magrittr mime pdftools rmarkdown rvest text2speech tuneR xml2 yaml]; }; + ariExtra = derive2 { name="ariExtra"; version="0.3.1"; sha256="1j8x2m9799i5kxrvsf2cjrffb5p6r4zjrr0khsy4i22xn7kyl8nf"; depends=[ari docxtractr httr jsonlite magrittr mime pdftools rmarkdown rvest text2speech tuneR xml2 yaml]; }; aricode = derive2 { name="aricode"; version="1.0.0"; sha256="0i6vynhby4sjiaxscjrgrb5d96f307yjr8r9ff1fhv264lydcqwl"; depends=[Matrix Rcpp]; }; arkdb = derive2 { name="arkdb"; version="0.0.12"; sha256="0r0lhkl402mwn3xsc3l8s9pzkl0x23ql3iggs8c8f9zdf8hp19i3"; depends=[DBI]; }; - arkhe = derive2 { name="arkhe"; version="0.3.0"; sha256="141jjzv8p0phhrvscblfp278yfdlvayiv2f0rq2pq8hgivkm0cpz"; depends=[]; }; + arkhe = derive2 { name="arkhe"; version="0.4.0"; sha256="15dvkbixkxlayd9kwv03y8bx2kvhaiv1sb2s7xgcv9kqf43zankf"; depends=[]; }; arm = derive2 { name="arm"; version="1.11-2"; sha256="1grb27vayr2vhyalzfqbhx6p278r7c3l4pzi5nrz3dmnyqrbx1c3"; depends=[abind coda Hmisc lme4 MASS Matrix nlme]; }; armada = derive2 { name="armada"; version="0.1.0"; sha256="191iwf5y1za3wssawkyi9jcingfqqxcvv88hglpw6j7y3x5f47hf"; depends=[anapuce circlize ClustOfVar ComplexHeatmap doParallel FAMT glmnet impute mvtnorm qvalue VSURF]; }; armspp = derive2 { name="armspp"; version="0.0.2"; sha256="098c59hdzr4ly8sx72xkcbjmiz5y65id1slsscwjji1yssb23lqq"; depends=[Rcpp]; }; @@ -5729,20 +5947,20 @@ in with self; { aroma_apd = derive2 { name="aroma.apd"; version="0.6.0"; sha256="1l9p5qww71h6wlg2z15wirsfz2i7hmf637l17zaf3n7fp9s3flc7"; depends=[R_huge R_methodsS3 R_oo R_utils]; }; aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; aroma_core = derive2 { name="aroma.core"; version="3.2.2"; sha256="0ma84hhqn0g4pw0b8zkdcrz96z3j3lnw3yka0gd9861s80p33q1m"; depends=[BiocManager future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; - arpr = derive2 { name="arpr"; version="0.1.1"; sha256="0j69nbmhmhmyfna011gv68wvxv1x2lijz94pyg9g2ax720x74i2q"; depends=[magrittr]; }; + arpr = derive2 { name="arpr"; version="0.1.2"; sha256="02qsvmgnyr7aqgpij8m5yg9cww8wbrg6a33vxxvy3sl9v5f7vzh5"; depends=[magrittr rlang]; }; arrApply = derive2 { name="arrApply"; version="2.1"; sha256="0qy7iwi580rrf3sycsbv6qgxsqcdy9pdbnkdrx81j68qni9iw737"; depends=[Rcpp RcppArmadillo]; }; arrangements = derive2 { name="arrangements"; version="1.1.9"; sha256="0nrlyxgn6667l2rb1q5rvps1anld9aq88qqr3ch2i6zchnqxrdg9"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.1-0"; sha256="02rl530qxi1idiqpmzg5wr9vl5c7phizhpj64k5pn8xq9zfxbpaz"; depends=[svUnit]; }; - arrow = derive2 { name="arrow"; version="4.0.0"; sha256="18sz7s0m5rjry9qjlq105qnri8cc5j15f325kmgzg6v4bn107wc1"; depends=[assertthat bit64 cpp11 purrr R6 rlang tidyselect vctrs]; }; + arrow = derive2 { name="arrow"; version="5.0.0.2"; sha256="1ajkcmasj22j5k15ms7iyd1rg9qpdj5jya6nmhzh8z4iiv7gy13j"; depends=[assertthat bit64 purrr R6 rlang tidyselect vctrs]; }; ars = derive2 { name="ars"; version="0.6"; sha256="0zs1rk3i7pc9wcvxrvjcls194mfbvmkz7cb6pwd1cm3fzjwsyxsp"; depends=[]; }; arse = derive2 { name="arse"; version="1.0.0"; sha256="0ssaalc058m09gfcr1n0s729rx2plia3zkhlynj67drclyvhyb0i"; depends=[dplyr pracma]; }; - arsenal = derive2 { name="arsenal"; version="3.6.2"; sha256="0spm0s23xs5bm88slkz6a65mbs663qhnravwxp7rkdkr378vb5fn"; depends=[knitr]; }; + arsenal = derive2 { name="arsenal"; version="3.6.3"; sha256="0qvs3ld28djnjnggdhqjwq8sbv8zz322qahlvf7dnx35yqf6xkms"; depends=[knitr]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; - arules = derive2 { name="arules"; version="1.6-7"; sha256="0m80kndfbannw8h53nqdd5wl8h33q2z259aa1cp1nwadaxf9fc1q"; depends=[Matrix]; }; + arules = derive2 { name="arules"; version="1.6-8"; sha256="1gy6wrys1qqik65dyr325hdbfmd3fx9a2lzdnrr29g751hprjx2l"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.2.0"; sha256="1d72lrfbyr2g7n6r04vyaqs3pvs3jhkfr4yfgn2fj690q3ff0qr3"; depends=[arules discretization glmnet Matrix]; }; - arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-7"; sha256="1id1zhn9wb99qcq5yajn1safmmsw113f3xlpmcy3zwnapafcbh8a"; depends=[arules rJava]; }; + arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-8"; sha256="0kqvi7dzq3mrn6cq22gwxh4p54mgfn9s1sd2cfnbw1f9zp078lsn"; depends=[arules rJava]; }; arulesSequences = derive2 { name="arulesSequences"; version="0.2-25"; sha256="0vd5fgi1b45kgfm5yi9ygaxm0sb8qarz5lsknwh5gla3h0k7l66b"; depends=[arules]; }; - arulesViz = derive2 { name="arulesViz"; version="1.4-0"; sha256="08as3kmwmhqcf8k2j6z9hcsyz8p8qfb93bj1jiqsyx2w50aar8qm"; depends=[arules colorspace dplyr DT ggplot2 igraph plotly scatterplot3d seriation tibble tidyr vcd visNetwork]; }; + arulesViz = derive2 { name="arulesViz"; version="1.5-0"; sha256="188zbmvhvq0cllgbhi16ic93ka9mk96ssdc8x24kmxqvq5zdmdh4"; depends=[arules colorspace dplyr DT ggnetwork ggplot2 igraph plotly scatterplot3d seriation tibble tidyr vcd visNetwork]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; asbio = derive2 { name="asbio"; version="1.6-7"; sha256="08lmb4dmbsavw17z1jqqiv2jin5ms4zq8nv1n1cjmh8xk3sywafw"; depends=[combinat deSolve gWidgets2 gWidgets2tcltk lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; @@ -5758,12 +5976,12 @@ in with self; { asht = derive2 { name="asht"; version="0.9.6"; sha256="0zi0v7v7ivis5v6a8m1vh21c1wymshxcb948amgrq1j6svm505sf"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; askpass = derive2 { name="askpass"; version="1.1"; sha256="07q0ik8jzk44vpwh48rr3fnpd7dzsdhjjsl4l850rffv3dyq4h6v"; depends=[sys]; }; aslib = derive2 { name="aslib"; version="0.1.1"; sha256="0vzrxxj298skgv6gn9cbhr75ywmh5amsk9m02zncl20jcydf9j91"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; - asnipe = derive2 { name="asnipe"; version="1.1.15"; sha256="1hnbkr26qmyv20w94wp0zxa8b0aqpsbrvsky4vcajlnpmgqhzlkk"; depends=[MASS Matrix]; }; - aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; + asnipe = derive2 { name="asnipe"; version="1.1.16"; sha256="0ky4v85gry8r265z8p7mi9kzq6j3s032jg4wddkzjjqgxzyzjl5y"; depends=[MASS Matrix]; }; aspect = derive2 { name="aspect"; version="1.0-5"; sha256="0pbc0daxw20xcbgqyyd5gbs9kmbaf2dq8ajllx0mnfwdcak9jfgj"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; - asremlPlus = derive2 { name="asremlPlus"; version="4.2-32"; sha256="19gallcq86nzdnpigcc1yx24cai09jkwzyn1f7h71w8sr6jfid4a"; depends=[dae doParallel dplyr foreach ggplot2 plyr RColorBrewer reshape stringr]; }; - r_assert = derive2 { name="r_assert"; version="1.0.1"; sha256="0n5l48yb0djl6rdj50p1dslpw3c5kbi15yz6z6rdgic575gjwzdc"; depends=[]; }; + asremlPlus = derive2 { name="asremlPlus"; version="4.3-21"; sha256="0clyzdvxhwmg7w70l0yacsc50dd6284spdwglyrdfxkz85xdhwqg"; depends=[dae doParallel dplyr foreach ggplot2 RColorBrewer reshape sticky stringr]; }; + assemblerr = derive2 { name="assemblerr"; version="0.1.0"; sha256="13vhn73v2429smf4av414xrm9vmbcxwhfgbq33zfdn7qyrj8wpv1"; depends=[cli glue magrittr purrr rlang tidyselect vctrs]; }; + r_assert = derive2 { name="assert"; version="1.0.1"; sha256="0n5l48yb0djl6rdj50p1dslpw3c5kbi15yz6z6rdgic575gjwzdc"; depends=[]; }; assertable = derive2 { name="assertable"; version="0.2.8"; sha256="1cciil1nzxd8gbj49w99jiv077lbpb59vx7bmb4p218aj2h5hqq4"; depends=[data_table]; }; assertive = derive2 { name="assertive"; version="0.3-6"; sha256="02palil82idqhhshcdjsfsja9qkqnd0dczqzj5gbccy4hfg1c0y4"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; assertive_base = derive2 { name="assertive.base"; version="0.0-9"; sha256="07m0ddz092bgbl2fn1yk932h0iajdcqkri632477wl5a1q5r3w2b"; depends=[]; }; @@ -5784,19 +6002,20 @@ in with self; { assertr = derive2 { name="assertr"; version="2.8"; sha256="00764vv86r3bn4r85in4w637harffyw605fgq0dj6mrbrwcfb650"; depends=[dplyr MASS rlang]; }; assertthat = derive2 { name="assertthat"; version="0.2.1"; sha256="17wy5bdfzg73sg2clisg1k3zyn1adkj59x56m5nwia2k8z67zkw5"; depends=[]; }; assignPOP = derive2 { name="assignPOP"; version="1.2.2"; sha256="0ws40rrz3zql8xsa0r8hgb81l75isglzsfhnb8jbvig6s9m058yi"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; - assignR = derive2 { name="assignR"; version="2.0.0"; sha256="0xwkqib879c13iqy1d260k08awbspa401j4mim7wzmfas4dp83jb"; depends=[maptools raster rgdal sp]; }; + assignR = derive2 { name="assignR"; version="2.1.1"; sha256="10494lg0ph5c4ks2z2ndajx3fiwv2my4i32jg89l0z0dxgfaz7lf"; depends=[maptools mvnfast raster rgdal rlang sp]; }; assist = derive2 { name="assist"; version="3.1.7"; sha256="0avxaa3v4gvb5d7fg761f9l5nr8nyqdq6sq408zpyaki6s6q3acf"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; - asteRisk = derive2 { name="asteRisk"; version="1.0.0"; sha256="0sp89q1iy1q8ypl2p9rr66yagmxy1dcwbawldsljrrql0f7a49n9"; depends=[deSolve]; }; - aster = derive2 { name="aster"; version="1.0-3"; sha256="1bcghw30db8m39fqza2msi6ahfn6yx7gaa3fzcmnxb8jrvrlpjgy"; depends=[trust]; }; + asteRisk = derive2 { name="asteRisk"; version="1.1.0"; sha256="16p62lscbmk3kf55lz8x9mi67p4gkygcnhvyqq29pr7fjg5nkzqd"; depends=[deSolve]; }; + aster = derive2 { name="aster"; version="1.1-2"; sha256="0vf1ffkn4a3bz2lgz1gn2hjgp8c2v9ch05d5r1gh2q77zijvry1m"; depends=[trust]; }; aster2 = derive2 { name="aster2"; version="0.3"; sha256="17d200sg0vn1fj6lb480dhszm70q6ipjldilb3x0jp72hiczakk9"; depends=[Matrix]; }; astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; }; astrochron = derive2 { name="astrochron"; version="1.0"; sha256="0238qv3fakm1i5zid8hslf1m99j7px2k07vlkp8pspnbivn553s3"; depends=[doParallel fields foreach IDPmisc iterators multitaper]; }; astrodatR = derive2 { name="astrodatR"; version="0.1"; sha256="00689px4znwmlp6qbj6z2a51b7ylx1yrrjpv6zjkvrwpv6lyj9fw"; depends=[]; }; astrolibR = derive2 { name="astrolibR"; version="0.1"; sha256="0gkgry5aiz29grp9vdq9zgg6ss47ql08nwcmz1pfvd0g0h9h75l8"; depends=[]; }; - astsa = derive2 { name="astsa"; version="1.12"; sha256="00m0hj9b8rvs0l66i5ahr2gyz2zcxwdwhdn9z2hjagmc2zhn9qq1"; depends=[]; }; + astsa = derive2 { name="astsa"; version="1.14"; sha256="09zx2q419p0b1c336ybh4i62v5dvn3sp39dxn5kwlrqchjj7f5z6"; depends=[]; }; asus = derive2 { name="asus"; version="1.0.0"; sha256="16hp8xajb631a5amm1cvhzq8z4cwh1vjiavv3n11fzpxyskhmfrb"; depends=[rwt wavethresh]; }; + asylum = derive2 { name="asylum"; version="1.0.1"; sha256="1s2irvwv7lnfr9f67fccw1zi5bn92c30l7n3h8bhb44azli37924"; depends=[]; }; asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; }; asymmetry = derive2 { name="asymmetry"; version="2.0.3"; sha256="030ml5fknfi57i7j9p3saawjgnqm2rs5y3n4bnsac6m8jlzjns5s"; depends=[gplots smacof]; }; asymmetry_measures = derive2 { name="asymmetry.measures"; version="0.2"; sha256="039afqmdir200aijln9q0g3rkahkxqahw6yz5mnw62jsslr9xskb"; depends=[gamlss_dist skewt sn]; }; @@ -5818,27 +6037,31 @@ in with self; { aucm = derive2 { name="aucm"; version="2019.12-1"; sha256="1vjb5jiq2iz6c8nhfcbqg21nms7nf485xlrgd7mdkbzvqxxl43h6"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; auctionr = derive2 { name="auctionr"; version="0.1.0"; sha256="0kfx81irqr9mfp4n86z7q5nclcci8vlpvq9zid7miyw3rci7dfvi"; depends=[numDeriv]; }; - audio = derive2 { name="audio"; version="0.1-7"; sha256="0x4wcl8nlymmzhsdd255ybxdwnshksmr92y6drcajnij8mx3kq2j"; depends=[]; }; + audio = derive2 { name="audio"; version="0.1-8"; sha256="1d2vkgbp64xlh9qccxvair00n8z1cwxmj37061ggpl9ylsy7h70s"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; - audiometry = derive2 { name="audiometry"; version="0.2.0"; sha256="1qgvzbq69xb9c8y7d4dxgnhppa485c4sfg0nb6gljd1vwj3y7iyf"; depends=[ggplot2]; }; - audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; - auditor = derive2 { name="auditor"; version="1.3.0"; sha256="1h6k15z3xf8isqqarbah6mz3nabjva4dbrbnf1fjw34idj804jbw"; depends=[DALEX ggplot2 ggrepel gridExtra hnp scales]; }; - audrex = derive2 { name="audrex"; version="1.0.0"; sha256="0b68i5szvcndqfzmwnm88yf2cgyrp7fmg1gs671ckz9pqr026wkc"; depends=[abind bizdays fANCOVA ggplot2 imputeTS lubridate narray purrr rBayesianOptimization readr scales stringr tictoc xgboost]; }; + audiometry = derive2 { name="audiometry"; version="0.3.0"; sha256="0v6lhkm298xgdny0fhpldfwj8s4ljr21w6y6sv3vvyl87qjgwx8i"; depends=[ggplot2]; }; + audit = derive2 { name="audit"; version="0.1-2"; sha256="0c8b94a5am196sbvmjxya7cg4aq6fcxr8c958fxx3jmy9r4hn6s2"; depends=[]; }; + auditor = derive2 { name="auditor"; version="1.3.3"; sha256="1y6qpbc78yv2w1y9p0mczv69s661i9n2y0x09c5p3hdka7km662w"; depends=[DALEX ggplot2 ggrepel gridExtra hnp scales]; }; + audrex = derive2 { name="audrex"; version="1.0.1"; sha256="06r9gn3rdqxln197iyajdsx8ikq0m2hik171403y3dxxr5bf8jsf"; depends=[abind fANCOVA ggplot2 imputeTS lubridate modeest moments narray purrr rBayesianOptimization readr scales stringr tictoc xgboost]; }; augSIMEX = derive2 { name="augSIMEX"; version="3.7.4"; sha256="0620yxqi160ar91shl5macn890zpc60c9nqy4w8i6m7sskv6gl3z"; depends=[Formula MASS nleqslv Rcpp]; }; - augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.4"; sha256="0hnany7qa34spvsz37b4l4wp81g96nac8hk3px0hy18qrikk1g18"; depends=[dplyr emmeans flextable ggplot2 moments multcomp multcompView officer Rdpack reshape2 stringi]; }; - auk = derive2 { name="auk"; version="0.4.3"; sha256="10dvajhxcxx9fdayqyhq5nkfqb1k17xm04gpgahwdhvxx2g74qq6"; depends=[assertthat countrycode dplyr httr magrittr rlang stringi stringr tidyr]; }; + augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.5"; sha256="1bfb1jqakghf1nb3zwzf69cywwxwr1whzvyig8g3qa8ciq5f1h3i"; depends=[dplyr emmeans flextable ggplot2 mathjaxr moments multcomp multcompView officer Rdpack reshape2 stringi]; }; + auk = derive2 { name="auk"; version="0.5.0"; sha256="0d7xvpnszsx5p5ik0i8xvzqazd8ll8sg0mwv80pd9gpgriwvpxv2"; depends=[assertthat countrycode dplyr httr magrittr rlang stringi stringr tidyr]; }; aurelius = derive2 { name="aurelius"; version="0.8.4"; sha256="00bpf9sggvnajpmg3zsdgfjinkb6wbrcf1ris7qfhh1rp5rz4m4m"; depends=[gbm glmnet jsonlite]; }; - ausplotsR = derive2 { name="ausplotsR"; version="1.2.4"; sha256="0x94yx59gxa0mh2g6j2r8dxp7hyscmvcs9d1imjfrmi0r778f35f"; depends=[betapart curl ggplot2 gtools httr jose jsonlite mapdata maps maptools plyr R_utils simba sp vegan]; }; + ausplotsR = derive2 { name="ausplotsR"; version="1.2.6"; sha256="1vnf1rhg5frv1kc5bdssvljww6bw2q1cj29y4304851fifk8l502"; depends=[betapart curl ggplot2 gtools httr jose jsonlite mapdata maps maptools plyr R_utils simba sp vegan]; }; auth0 = derive2 { name="auth0"; version="0.2.1"; sha256="077nqh28q3b9jb25fy0157l06zpx3x0rg4z5dz2dqsh88xy4nhqj"; depends=[htmltools httr shiny shinyjs yaml]; }; auto_pca = derive2 { name="auto.pca"; version="0.3"; sha256="01m2ldpcxzj7fhgmr9wp4ha3gqdyh7l5bkrnw83smcbq5229hsyy"; depends=[plyr psych]; }; autoBagging = derive2 { name="autoBagging"; version="0.1.0"; sha256="01k44rgkpbbr3m2x360aq0fz2qi7nz036g5dsh2y3jy94rmddbyy"; depends=[abind caret cluster CORElearn e1071 entropy infotheo lsr MASS minerva party rpart xgboost]; }; autoCovariateSelection = derive2 { name="autoCovariateSelection"; version="1.0.0"; sha256="0s9ar7bmw0n84hvavp63zhm6769l9p88md0kqqcxl0mw67j8q930"; depends=[data_table dplyr purrr]; }; + autoFC = derive2 { name="autoFC"; version="0.1.2"; sha256="1hxpmd753qpzlyjivn37m1kij3gpp9x6xyw1x6090h9n4girnya2"; depends=[irrCAC]; }; autoFRK = derive2 { name="autoFRK"; version="1.4.3"; sha256="1k3h2gsck06dnvrifg9rhxi6b3fwfjrkvg0q2wzb9kdnnzgiwcln"; depends=[fields filehash filehashSQLite filematrix FNN LatticeKrig MASS mgcv Rcpp RcppEigen RcppParallel RSpectra spam]; }; + autoMFA = derive2 { name="autoMFA"; version="1.0.0"; sha256="1sbcl38cq7y7hln1qffk5s71xgg9hs7dlwyvynqf96z2z2421pw4"; depends=[abind expm MASS Matrix pracma Rdpack Rfast usethis]; }; autoMrP = derive2 { name="autoMrP"; version="0.98"; sha256="0rn55vb9rpfbjvc8i4awmhhz9xg3acxxgwkk1jjzzhydhzgdg1q4"; depends=[doParallel doRNG dplyr e1071 EBMAforecast foreach gbm ggplot2 glmmLasso knitr lme4 purrr rlang tibble tidyr]; }; autoTS = derive2 { name="autoTS"; version="0.9.11"; sha256="1mwpazynp5hdc2ccnhvddkajfcd4qam23pvjl9accq1rnxzxkiyv"; depends=[dplyr forecast ggplot2 lubridate magrittr plotly prophet RcppRoll rlang shiny shinycssloaders tidyr]; }; - autocogs = derive2 { name="autocogs"; version="0.1.3"; sha256="1xv2sv5p5pskp7mw9zcgcbwsbfzjiabigld92npd3mzy8n7zdli6"; depends=[broom checkmate diptest dplyr ggplot2 hexbin MASS mclust moments progress tibble]; }; + autocart = derive2 { name="autocart"; version="1.4.5"; sha256="1zgcmrm4dkdnr130hwwka2nwdczgvc3jc9hxrb6nfs8ijb24gl36"; depends=[fields mgcv Rcpp RcppArmadillo RcppParallel]; }; + autocogs = derive2 { name="autocogs"; version="0.1.4"; sha256="0v27l9a0ysj7x9wjka1jl1bq9rmxmzldclcp1w59a6807wjlszhx"; depends=[broom checkmate diptest dplyr ggplot2 hexbin MASS mclust moments progress tibble]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; - autoharp = derive2 { name="autoharp"; version="0.0.6"; sha256="0a9wbp4kl22wq0yfbr48kvf6ynjfmpnas36xkvk61xyynakvj6fz"; depends=[dplyr igraph knitr lintr magrittr pryr rlang rmarkdown shiny stringr tibble tidyr]; }; + autoharp = derive2 { name="autoharp"; version="0.0.8"; sha256="1g6s7ljscdb4gmk1vf6sqwkdg1asm36wcjwy9k85a5gzbh2lrkq2"; depends=[dplyr igraph knitr lintr magrittr pryr rlang rmarkdown shiny stringr tibble tidyr]; }; + autohd = derive2 { name="autohd"; version="0.1.0"; sha256="14wyiqhmbp8v52s1p5svvcjpwg8pwqrqh3zzm17blcl2hr4p9cy8"; depends=[broom coxme hdbm Hmisc ICBayes icenReg missForest mlr3 Rdpack rjags schoolmath survival SurvRegCensCov tibble usethis]; }; autoimage = derive2 { name="autoimage"; version="2.2.3"; sha256="1jhkd7mbig6wpyc69iynfrj5i62lrwcwqbgjkmq8b9p5raglm1g2"; depends=[colorspace fields ggplot2 mapproj maps MBA]; }; autokeras = derive2 { name="autokeras"; version="1.0.12"; sha256="0wyqz40fc277z1q1zxdmmjzksnmlh58r27a6hx08h6hmzvng5avy"; depends=[keras reticulate]; }; automagic = derive2 { name="automagic"; version="0.5.1"; sha256="1mmm6kj6mxrn3s4v8ryszkxr9z7bh9cvhin7xjq111fkwly7wjkq"; depends=[dplyr formatR knitr magrittr purrr remotes yaml]; }; @@ -5847,9 +6070,8 @@ in with self; { automultinomial = derive2 { name="automultinomial"; version="2.0.0"; sha256="04rjg3xjlhnkchzvdxqm762z5abm81s5b9czgzmli30zh07bf3fd"; depends=[igraph Matrix numDeriv]; }; autoplotly = derive2 { name="autoplotly"; version="0.1.4"; sha256="1z577jvadgiz028z7x0786d3qhlkrvv9i34xmllizvg94kxv3bl1"; depends=[ggfortify ggplot2 plotly]; }; autoshiny = derive2 { name="autoshiny"; version="0.0.2"; sha256="0s06ynnirgsh19x8qq4020piirkhvjqpvz372syygvlal062y6cn"; depends=[shiny]; }; - autostsm = derive2 { name="autostsm"; version="1.3"; sha256="0w4f4fdl5ypd9d8zrw74cmih2m4fyp23cdnz0hx6pcbl4mgjlw9h"; depends=[data_table doSNOW foreach forecast ggplot2 ggrepel gridExtra imputeTS lmtest lubridate Matrix maxLik progress Rcpp RcppArmadillo sandwich strucchange tseries tsutils zoo]; }; - autota = derive2 { name="autota"; version="0.1.3"; sha256="07n34v4lpql5n0y94pm07ywl2z9azjgjrpw7qyfxa6qw6gv71gid"; depends=[base64enc glue httpuv magrittr memoise purrr RJSONIO rlang rlist rstudioapi stringdist stringr xml2]; }; - autothresholdr = derive2 { name="autothresholdr"; version="1.3.10"; sha256="1z52z4a0f2rqfy53jfznpwdipzz4wa55jgwrabr5smbs4knvk7q1"; depends=[checkmate ijtiff magrittr purrr Rcpp rlang strex stringr]; }; + autostsm = derive2 { name="autostsm"; version="1.6"; sha256="086ndq164bbp7fczzwdx3ryva3qc2hnswm7mlig2jmn0w01ivwr0"; depends=[data_table doSNOW foreach forecast ggplot2 ggrepel gridExtra lmtest lubridate maxLik progress Rcpp RcppArmadillo sandwich strucchange zoo]; }; + autothresholdr = derive2 { name="autothresholdr"; version="1.3.11"; sha256="1w0lxi9bbnffx0gjmll98ki4zh7i6v8wbjd0ziwzca1qwq3z4a9i"; depends=[checkmate ijtiff magrittr purrr Rcpp rlang strex stringr]; }; av = derive2 { name="av"; version="0.6.0"; sha256="0g6815y24h4la714a5bkj7nj4n39jycfynkli6y3jlijql96j2il"; depends=[]; }; available = derive2 { name="available"; version="1.0.4"; sha256="18dqm10dicbvjd5wli4nkv4fip0fgh2b9h9gm5511ayfsdg8lc8l"; depends=[cli clisymbols crayon desc glue jsonlite memoise SnowballC stringdist tibble tidytext udapi yesno]; }; avar = derive2 { name="avar"; version="0.1.1"; sha256="1i0bk3y0ca58ihwn4di8rpkp5vs2j5b80rcvaf72n9h2hp8i2ncz"; depends=[Rcpp RcppArmadillo simts]; }; @@ -5875,7 +6097,7 @@ in with self; { azuremlsdk = derive2 { name="azuremlsdk"; version="1.10.0"; sha256="0s64kjrmcdnjdwh5mdm5vxgvrl9ghvfv6bair7qfzz32jlab99m0"; depends=[DT ggplot2 htmltools plyr reticulate rstudioapi servr shiny shinycssloaders]; }; b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; - bRacatus = derive2 { name="bRacatus"; version="1.0.3"; sha256="17f6k4wa2jg2w4jr1xf2p3wqp9m81q4x33ksgvghx62cah2yf56q"; depends=[data_table geojsonio jsonlite maptools plotfunctions raster rgbif rgeos rworldmap sp]; }; + bRacatus = derive2 { name="bRacatus"; version="1.0.4"; sha256="1sms54y3b2lkcdvn7hihil9wrxyhyvanisscg2xqdzjgr7wf30da"; depends=[data_table geojsonio jsonlite maptools plotfunctions raster rgbif rgeos rworldmap sp]; }; bReeze = derive2 { name="bReeze"; version="0.4-3"; sha256="17nc6qvw9l6sq8knd1mk193md2y3z1jlcjymqzl389yxj8s0i2il"; depends=[lubridate]; }; bSims = derive2 { name="bSims"; version="0.2-1"; sha256="024k9s42a9w5pmw024b15sj5ilcfpkm7lv59yimjicr9lmw246kb"; depends=[deldir intrval MASS mefa4 pbapply]; }; bWGR = derive2 { name="bWGR"; version="1.6.6"; sha256="1m5spafvl5pn0s60vaf8wz7iaibsa7laq7kp8y9xj20pp3f76hvr"; depends=[Rcpp]; }; @@ -5884,13 +6106,12 @@ in with self; { babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babelgene = derive2 { name="babelgene"; version="21.4"; sha256="1gk5pm3b3shr1id66a11ywc1b823gbj8yckg24szzfhj8g4ixyf0"; depends=[dplyr rlang]; }; - babelwhale = derive2 { name="babelwhale"; version="1.0.1"; sha256="0mgkg9hji4mab3l33vvyyyc1d2q84l1zrmg63vr3b3gr0d62jcnl"; depends=[crayon dplyr dynutils processx purrr]; }; - babette = derive2 { name="babette"; version="2.2"; sha256="0gbbx2awdml3z3wsgj7zsbqnfbvng5lmba5cl358xkz5q621cy9d"; depends=[beastier beautier mauricer phangorn remotes stringr testit tracerer xml2]; }; - babsim_hospital = derive2 { name="babsim.hospital"; version="11.7.14"; sha256="1jki8zg6wfnqps91ziyy3ik5cqqc7cx7sc8d32rimj1gwvg9ig1z"; depends=[checkmate curl data_table dplyr ggplot2 golem igraph lubridate markovchain padr plyr rvest scales simmer slider SPOT testthat xml2]; }; + babelwhale = derive2 { name="babelwhale"; version="1.0.3"; sha256="0ph825dwvr48fhamy1l5564linz7cj7b9sj511as77f1yqycv4a2"; depends=[crayon dplyr dynutils processx purrr]; }; + babsim_hospital = derive2 { name="babsim.hospital"; version="11.8.2"; sha256="16gx30c1a2pyj6ndfvl7wn1lj1n69j4k5klrqdh50zapmzbrxjkg"; depends=[checkmate curl data_table dplyr ggplot2 golem igraph lubridate markovchain padr plyr rvest scales simmer slider SPOT testthat xml2]; }; babynames = derive2 { name="babynames"; version="1.0.1"; sha256="1gcpd6lncqwjz05z98ra6hcc8q966l2594ylkg50avndild89n3h"; depends=[tibble]; }; bacistool = derive2 { name="bacistool"; version="1.0.0"; sha256="1hby2bmxbc8qgjzgkp2flv89lpzzvg3vr7s98989ayjmv4vgmqaf"; depends=[rjags]; }; backShift = derive2 { name="backShift"; version="0.1.4.3"; sha256="1dhmq51w07vcqlngsb04ip0wqbgqq2xdfdm1w82r082f07ywqb16"; depends=[clue ggplot2 igraph MASS matrixcalc reshape2]; }; - backbone = derive2 { name="backbone"; version="1.4.0"; sha256="17d86rhf7qg1dwqyknn4dmfwxv4vkl7d2yzv8rn6a0jx00mdwb9i"; depends=[igraph Matrix network PoissonBinomial]; }; + backbone = derive2 { name="backbone"; version="1.5.1"; sha256="06awrjcs78h7i632v5dyfqj0gldnww4xkn4j0rffimf3aiwxm7l9"; depends=[igraph Matrix network PoissonBinomial]; }; backpipe = derive2 { name="backpipe"; version="0.2.3"; sha256="12k2cv9x8h0b002m9c8g4vj5a7chp4b8jqz377ia0diqw89dydpm"; depends=[]; }; backports = derive2 { name="backports"; version="1.2.1"; sha256="1mf2nz78l97lbxyagv55bcxrny51ds8g28h307cfa1g3ayylp0x2"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; @@ -5898,18 +6119,18 @@ in with self; { bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; badgecreatr = derive2 { name="badgecreatr"; version="0.2.0"; sha256="0mdixklaxky5gs8zm99ky280vxxlbq1mxnaarq6x0d1cb71bzv4l"; depends=[git2r]; }; badger = derive2 { name="badger"; version="0.1.0"; sha256="09g8183dz58546mcql7fs2px71ycpi2jfw69zca9d96c9py98ryn"; depends=[desc dlstats rvcheck usethis]; }; + bagged_outliertrees = derive2 { name="bagged.outliertrees"; version="1.0.0"; sha256="0fcd54j6vci2yvlb609dck4pwbn54irkdk472cjc965rcw6dz9z7"; depends=[data_table doSNOW dplyr foreach outliertree rlist]; }; baggedcv = derive2 { name="baggedcv"; version="1.0"; sha256="1rqs4sm6g1anck5s2dxlm1vcmylpphcbs2dpvf1sjki5lrzdq9z4"; depends=[doParallel foreach kedd mclust]; }; - baggr = derive2 { name="baggr"; version="0.4.0"; sha256="1cbajifb4gavamj46zs9vk6ihhg6wnv2hn75452bdc2mc4ingn5n"; depends=[bayesplot BH crayon forestplot ggplot2 gridExtra Rcpp RcppEigen rstan rstantools StanHeaders testthat]; }; - baguette = derive2 { name="baguette"; version="0.1.0"; sha256="0yjy0ba3a1r39b7l5igjyzf6v5gfyb4ll6mvd7wskzvnr0gyaq9n"; depends=[butcher C50 dials dplyr earth furrr generics hardhat magrittr parsnip purrr rlang rpart rsample tibble tidyr withr]; }; + baggingbwsel = derive2 { name="baggingbwsel"; version="1.0"; sha256="0khvkxml4nwkahgl5ijdv0bjgwabmznzq99p71iw26ck808hafkl"; depends=[doParallel foreach kedd mclust misc3d nor1mix Rcpp rgl rpanel sm tkrplot]; }; + baggr = derive2 { name="baggr"; version="0.6.9"; sha256="19k47v5zqrfgj40msp5f06xh74bdplvw57capjc3xs9dbmvxb31i"; depends=[bayesplot BH crayon forestplot ggplot2 gridExtra quantreg Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders testthat]; }; + baguette = derive2 { name="baguette"; version="0.1.1"; sha256="0srvvnyhi22r3l8j996zpq8mm140imdrijc0xhb8j9qgkqaia1b7"; depends=[butcher C50 dials dplyr earth furrr generics hardhat magrittr parsnip purrr rlang rpart rsample tibble tidyr withr]; }; bahc = derive2 { name="bahc"; version="0.3.0"; sha256="0yz0v33fhm38ivhr7bvajk9v7wdmhg9qg7ac8r2qr00rns82m6y3"; depends=[fastcluster matrixStats]; }; - bain = derive2 { name="bain"; version="0.2.4"; sha256="15car9j11s0ywss13g5swf1dxjjc91xmbkvx200mivca9bj6245m"; depends=[lavaan]; }; - baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; - balance = derive2 { name="balance"; version="0.2.4"; sha256="13ksd1ysd2by8qdc3vn1fgnaj1c2v0py7f501bajiyq6hpcwn1c5"; depends=[ggplot2]; }; + bain = derive2 { name="bain"; version="0.2.6"; sha256="1zlza0qx8634z0nm2dcba3q7kw36ry2crxjy8snapybhafl6v7l4"; depends=[lavaan]; }; bama = derive2 { name="bama"; version="1.2"; sha256="1amxls4jl2ys5wkn600xmx0y3d9zhkz2s96vn7h8fnrrv35212yp"; depends=[BH Rcpp RcppArmadillo RcppDist]; }; bamboo = derive2 { name="bamboo"; version="0.9.25"; sha256="1il8sn8ck36b1m9hazhf6gmr58iqi2hjn0rrpcv1laij0lybrcws"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.3.2"; sha256="11v9hy8ijbcqhwim0s3y69dz11jvys4vjvfnshj4p5qdz38sji6l"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="1.1-3"; sha256="0wijazi59ymm5a21qhi6afclw5w48j47y433rq2zzk04v6qhgh3w"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; - bamp = derive2 { name="bamp"; version="2.0.8"; sha256="0p7vi9gqplqnrc0vl55m1xx160k5kdxs4sxqxyrg908yhsnr5vj6"; depends=[abind coda]; }; + bamlss = derive2 { name="bamlss"; version="1.1-5"; sha256="0g1cji85b5708n9zgwvl2d006zhax0039x8yzmzf9s0xdhvd4lk5"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; + bamp = derive2 { name="bamp"; version="2.1.0"; sha256="0d72s0vzy32zcd9sw1zlxc0whh5dpvlk7r9680b9smpzb58ijgfi"; depends=[abind coda]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; bang = derive2 { name="bang"; version="1.0.1"; sha256="0m7p9gzspkyp40ir842ff4b1827w9rh7x49kpp3y4dpi83krqy5a"; depends=[bayesplot rust]; }; bannerCommenter = derive2 { name="bannerCommenter"; version="1.0.0"; sha256="1i0b3v4n0xylcbrg9i3a28z037m27vjfg61xz2hl99wavn0bsl1j"; depends=[]; }; @@ -5919,30 +6140,30 @@ in with self; { barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; bardr = derive2 { name="bardr"; version="0.0.9"; sha256="02499b3j10j7qq3whz9qijfp3amp0s1ji8qk76c53dsnkj8f9hvs"; depends=[]; }; barplot3d = derive2 { name="barplot3d"; version="1.0.1"; sha256="182kpiknv3id1bsgcc6b3ahbxmm8x3lxcpf1r6rckpr3s0whfx3g"; depends=[rgl]; }; - barsurf = derive2 { name="barsurf"; version="0.7.0"; sha256="0y6z2qwa12bnf8arfpkj4zbgfh2firvczw01hnsvd98h11bbx0zx"; depends=[colorspace kubik]; }; bartBMA = derive2 { name="bartBMA"; version="1.0"; sha256="15syk5a3lgzfyp17wk8mk14317yxsr47br26kyah5jg3dq4cyqdg"; depends=[BH mvnfast Rcpp RcppArmadillo Rdpack]; }; bartCause = derive2 { name="bartCause"; version="1.0-4"; sha256="1a1g4376l31pswxmmipm0xm3zazm1kfm3iwknjx6pchjavjhin9y"; depends=[dbarts]; }; bartMachine = derive2 { name="bartMachine"; version="1.2.6"; sha256="0zw42ffgyx08skl00a428f7gylby2rm8i0jpv6b1md557l1w06jy"; depends=[bartMachineJARs missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.1"; sha256="1wpfzrb6mrx3xmxy4rgnwygmpqq2l4ki2xqr4m51g1bl9nwirhzj"; depends=[rJava]; }; basad = derive2 { name="basad"; version="0.2.0"; sha256="1qc2amkrjrgdqys275p82lmbpjszm5rzjdpri7hqc9d8b8q1vc9q"; depends=[Rcpp RcppEigen rmutil]; }; base_rms = derive2 { name="base.rms"; version="1.0"; sha256="0lsbbcvmq5n3dpqic9qkyr8wdbmagaw32qfdnl0ck5b6ijh2wz0a"; depends=[do rms survival]; }; - base2grob = derive2 { name="base2grob"; version="0.0.3"; sha256="1hs9qym2hwq3wrknsfpmn9dvbxs3vyiqs3yfcb26knxqlv3qqw3j"; depends=[ggplotify]; }; base64 = derive2 { name="base64"; version="2.0"; sha256="1labh0ycdm2xcjssj8bhnyjvbk44mcdsi0rb2p8rfqa428mrq9cf"; depends=[openssl]; }; base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.4"; sha256="0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - basecamb = derive2 { name="basecamb"; version="1.0.1"; sha256="0xx73z7dnfh7qbawnb9kkcnwwyvb3w3gbyjf6x0k4dqndb4zx99s"; depends=[assertive_types assertthat Hmisc mice]; }; - basedosdados = derive2 { name="basedosdados"; version="0.0.5"; sha256="06cjz0ai0lyslrhwb3h6gxxg764027hjv6rcq6b6f0fcgbb950ig"; depends=[bigrquery cli dotenv dplyr glue googleAuthR httr magrittr purrr readr rlang stringr tibble writexl]; }; + basecamb = derive2 { name="basecamb"; version="1.0.4"; sha256="02sak07dfiiwn55fnv9b48gm2y25kqg6xrlj5zipapg3nffdgyxi"; depends=[assertive_types assertthat dplyr Hmisc mice purrr]; }; + basedosdados = derive2 { name="basedosdados"; version="0.1.0"; sha256="0igk1mdq1ibv3r5cfyd976vn2rylcz45ghl8z1hgkqbhp8b0wav3"; depends=[bigrquery cli DBI dbplyr dotenv dplyr fs glue googleAuthR httr magrittr purrr readr rlang scales stringr tibble writexl]; }; baseflow = derive2 { name="baseflow"; version="0.13.2"; sha256="02ygx32dfszk66f33wfszkvwi51v8zw2s45y9nlrgfws9rlpzll2"; depends=[airGR]; }; basefun = derive2 { name="basefun"; version="1.1-0"; sha256="17lrqi317hr21hirxxx931sfzqr19dadlb7jz16njsag1sjzmasv"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.3-1"; sha256="1spmp8z0hrb6db0r52i16524cp9zy1d1hr4y3b3i9q38m1iskpms"; depends=[limSolve SparseM]; }; + basemaps = derive2 { name="basemaps"; version="0.0.1"; sha256="15fgk5x9n8nfmhclydwaypzqv5dl6s1r9v40ahdnpc50y5p8zjay"; depends=[curl httr magick pbapply raster sf slippymath stars]; }; basetheme = derive2 { name="basetheme"; version="0.1.2"; sha256="0yck4qc7qd406s7kw95xgnfc0pfvzk3ylhkv6mk6l2wbkfm8ldrb"; depends=[]; }; basf = derive2 { name="basf"; version="0.2.0"; sha256="0l3y5p51jic3b8h1jclhhma4myll1g3vsxr8rj0dx1bvjfimkryw"; depends=[raster sf tibble]; }; basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.2.6"; sha256="057w8xzr0d3jvphhsq55ph9ck5hf4kiihfj57xbbyqx8biyfrjhc"; depends=[]; }; basicTrendline = derive2 { name="basicTrendline"; version="2.0.5"; sha256="0402nvm3i32sx3m3c7r74iaj22h570v819yiwkraicjpmg55dghi"; depends=[investr scales]; }; basicspace = derive2 { name="basicspace"; version="0.24"; sha256="1cy226njbax7dcgql89fns4l4w9fq328x3h0vb93l5jk883jgi8h"; depends=[]; }; - basictabler = derive2 { name="basictabler"; version="1.0.0"; sha256="0mkfa0ybq3v3ds038b7j73k8j3c597gdfp5qwkfkbbma6aylqq48"; depends=[dplyr htmltools htmlwidgets R6]; }; - basifoR = derive2 { name="basifoR"; version="0.3"; sha256="0m9d04ir4y7iliz3ps0ps13kaaypdpihym4szl8qhclbpp09ivxy"; depends=[foreign Hmisc httr measurements RODBC]; }; + basictabler = derive2 { name="basictabler"; version="1.0.2"; sha256="0d5gpvf3la0fky786z74i8q7il1mmb2prg8y9wslg2gbngnkvkvm"; depends=[dplyr htmltools htmlwidgets R6]; }; + basifoR = derive2 { name="basifoR"; version="0.4"; sha256="1clnmb57g7aclgw8ibj92pfixaism0af85w4kn0208nbm75c1kvf"; depends=[curl foreign Hmisc httr measurements RODBC]; }; + baskexact = derive2 { name="baskexact"; version="0.1.0"; sha256="0raa7nvd18szf63a5nj5r2hcaq3l54k79vs5wng8jhc41f5bndip"; depends=[arrangements Rcpp RcppArmadillo]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batata = derive2 { name="batata"; version="0.2.1"; sha256="0z3pj37jydidw3lq1yvp1yv1vqbm28nhj0v4kb3n30dl00kd0hmy"; depends=[fs glue jsonlite lubridate purrr remotes]; }; batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; @@ -5954,68 +6175,72 @@ in with self; { batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; baycn = derive2 { name="baycn"; version="1.2.0"; sha256="1ykz1brs3mz94n86d5qaq25vf24j5adyzpddxqmn7qklbxxr6fh5"; depends=[egg ggplot2 gtools igraph MASS]; }; bayefdr = derive2 { name="bayefdr"; version="0.1.0"; sha256="1c40jvdhbc23yvqiidjgs2f0p3mp3zw9wq0ap1d91if99p6him7n"; depends=[assertthat ggplot2 reshape2]; }; - bayes4psy = derive2 { name="bayes4psy"; version="1.2.6"; sha256="1w9yjgz2ziclffkzyw1rrny1ynmd7q1bbyjmp0wbmb4v1xhz83qr"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools scales StanHeaders]; }; - bayesAB = derive2 { name="bayesAB"; version="1.1.2"; sha256="0xg29s3h4dy43snlc365q80ix96hwh4mfy1qvv87yys3i9zfinm5"; depends=[ggplot2 Rcpp rlang]; }; + bayes4psy = derive2 { name="bayes4psy"; version="1.2.7"; sha256="01hsfkrbi45qba5ksyd98hmmcphkrhkvw1ia85m2qaqfa54nv9kz"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools scales StanHeaders]; }; + bayesAB = derive2 { name="bayesAB"; version="1.1.3"; sha256="1mwwbkd8mqm22mkbgrp5mq7i52qqjr9if09fnhb3ybdpqq3sdg73"; depends=[ggplot2 Rcpp rlang]; }; bayesCT = derive2 { name="bayesCT"; version="0.99.3"; sha256="0ragig1x34syhsnbnd58l2s7g23j7fb0cl9wkasvxq8cicw5hqgn"; depends=[bayesDP dplyr magrittr purrr survival]; }; bayesDP = derive2 { name="bayesDP"; version="1.3.4"; sha256="1xhqkymgn2h3ar4iwbdzpcw154adszcgx81sdx0wq3s033sx0cpk"; depends=[ggplot2 MCMCpack Rcpp RcppArmadillo survival]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.2"; sha256="1c6nacylnfmpbd53x8bwxf97qg8ai3vcq4d60xfpmdxrfkfvfgqm"; depends=[coda numDeriv]; }; bayesGAM = derive2 { name="bayesGAM"; version="0.0.1"; sha256="072q3kybnxjwc4s6qlww492cg43cr4zk6midyp5av7y3hnxbmqm8"; depends=[bayesplot BH boot cluster corrplot geometry ggplot2 gridExtra loo MASS mlbench Rcpp RcppEigen RcppParallel rstan rstantools SemiPar StanHeaders]; }; - bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.8"; sha256="0yqclffsihf5fgj386600zwkjb6wzg8ahw4drqim6ia9izpgbyyh"; depends=[coda mvtnorm]; }; + bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.10"; sha256="1jb7jfyxp210pc8myv9lnwb55hy19d39m10kkhs5lyjwc2lv0401"; depends=[coda mvtnorm]; }; bayesImageS = derive2 { name="bayesImageS"; version="0.6-1"; sha256="0hz6ynvrhsxp097zswdlascza5n27cq4hfaqdc3r8b7crmh7lrim"; depends=[Rcpp RcppArmadillo]; }; bayesLife = derive2 { name="bayesLife"; version="5.0-1"; sha256="1ydqc6f7dbvll1nljpxw4vr2fwwfd3d62py694b3gl1byc2m3phj"; depends=[bayesTFR car coda data_table hett wpp2019]; }; bayesPop = derive2 { name="bayesPop"; version="8.1-3"; sha256="018nwm6nmg0cpgkmiiqijry59f1adx103wy5dgz8a64f9hj4nqdi"; depends=[abind bayesLife bayesTFR data_table fields googleVis MortCast plyr reshape2 rworldmap wpp2012 wpp2019]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="3.3"; sha256="00brysldz0zbjbjs0qnd2mbpc3ipyz7224bnbwlf8d3b6ivw8iwv"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="7.0-4"; sha256="0zcgbfn07s60d3xpjmisfi4lkjcr5hl3z491zm7xripdmsanrqyd"; depends=[coda data_table MASS mvtnorm wpp2019]; }; - bayesZIB = derive2 { name="bayesZIB"; version="0.0.1"; sha256="10j7q589s59ygi02p92palj9fgbxvvmjrxc3lr69lykfzr32nxmf"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; + bayesTFR = derive2 { name="bayesTFR"; version="7.0-5"; sha256="1a19n67bb3wk6ywmcdv19cg640d5vd7r8p3p6hpgc3njj1ifp5fl"; depends=[coda data_table MASS mvtnorm wpp2019]; }; + bayesZIB = derive2 { name="bayesZIB"; version="0.0.2"; sha256="0lwrgzfbp3cjjc462va2vv5s43lp9j9hmydg3g2qs9w92mc7m77d"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; bayesanova = derive2 { name="bayesanova"; version="1.4"; sha256="1azr1yjigy3hygvzngs6b0m92kskxv0kga80j7ccsycawygmkjcs"; depends=[]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.2"; sha256="0976ryd0gbw3kpmxg2qxyp1m2swnrpa86vdhvqrqxp7fcrs8cs2z"; depends=[HDInterval plyr]; }; - bayesbr = derive2 { name="bayesbr"; version="0.0.0.1"; sha256="0f2sy2m417fzznlp2k2ag2xj6jdn027gibsi0cxhlk189pxxfxri"; depends=[BH coda dplyr fdrtool Formula ggplot2 loo magrittr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders stringr tidyr]; }; + bayesbr = derive2 { name="bayesbr"; version="0.0.1.0"; sha256="0zx123xqw2qglwxsnq0jy56kwk6zczslagapij9aj9n5bsifbcmx"; depends=[BH coda dplyr fdrtool Formula ggplot2 loo magrittr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders stringr tidyr]; }; bayescopulareg = derive2 { name="bayescopulareg"; version="0.1.3"; sha256="0jzj1iwd8g1kpypg6dl3anhay7kjvznfkyzri3sdf538s6vr88m5"; depends=[mvtnorm Rcpp RcppArmadillo RcppDist]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; - bayesdfa = derive2 { name="bayesdfa"; version="0.1.7"; sha256="1g53z8s186ab83454qa4jpg56z3vpwifvrc78fnl0xaycnmyrpwn"; depends=[BH dplyr ggplot2 loo Rcpp RcppEigen RcppParallel reshape2 rlang rstan rstantools StanHeaders viridisLite]; }; + bayesdfa = derive2 { name="bayesdfa"; version="1.1.0"; sha256="0q78scw9w0pmkpj1z8viwfcssv9p45z5kxskhxfnbjgzg6jiysm1"; depends=[BH dplyr ggplot2 loo Rcpp RcppEigen RcppParallel reshape2 rlang rstan rstantools StanHeaders viridisLite]; }; bayesdistreg = derive2 { name="bayesdistreg"; version="0.1.0"; sha256="04slvxzbqdi2ak3dlw4lfx55rhw28js8yjmvjpy8vvgq39vcx3dq"; depends=[MASS sandwich]; }; - bayesforecast = derive2 { name="bayesforecast"; version="0.0.1"; sha256="1k5kxj5rgsciqb51870xf1y0kqkf9sdqvn2ddaw36l4df3gdlf60"; depends=[astsa bayesplot BH bridgesampling forecast ggplot2 gridExtra loo lubridate MASS prophet Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders zoo]; }; - bayesian = derive2 { name="bayesian"; version="0.0.3"; sha256="1isywa9jz4bbz4ib1f5hwvfp2qy042zxakaq1lj1056ib3vfiqb1"; depends=[brms dplyr parsnip purrr rlang tibble]; }; + bayesforecast = derive2 { name="bayesforecast"; version="1.0.1"; sha256="0wnz6qblm3ib7lpj860s4lhrs4gvmyrmk779r38rybfvxw4xssii"; depends=[astsa bayesplot BH bridgesampling forecast ggplot2 gridExtra loo lubridate MASS prophet Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders zoo]; }; + bayesian = derive2 { name="bayesian"; version="0.0.6"; sha256="1g58wh554kh95hwmis49c3xs71jdq11s6n5minrz0km0awhpzj95"; depends=[brms dplyr parsnip purrr rlang tibble]; }; bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; }; - bayeslincom = derive2 { name="bayeslincom"; version="1.1.0"; sha256="025bf6lsh3ig3nl369fmp3kxrpd1bjrjd3hkjijsid86l0fl5a8n"; depends=[ggplot2]; }; + bayeslincom = derive2 { name="bayeslincom"; version="1.3.0"; sha256="0gk2ybp0m717kv986j91n5amfc282gdpcrjkq46gwzn0zhyxg8b8"; depends=[ggplot2]; }; bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; bayesm = derive2 { name="bayesm"; version="3.1-4"; sha256="154glks7rsjkza0sfi1kj7wj727py9sl1ba6sswflwmwc9n226q6"; depends=[Rcpp RcppArmadillo]; }; - bayesmeta = derive2 { name="bayesmeta"; version="2.6"; sha256="1wg736y4ccicradwaglx3x9bqkbq6v4qrza6zmqdm3f8f8css9j1"; depends=[forestplot metafor numDeriv]; }; + bayesmeta = derive2 { name="bayesmeta"; version="2.7"; sha256="1zl2y916jgl40mqzphgjwsqr4mbxvvggp0irirbb9nyzj5frqpjg"; depends=[forestplot metafor numDeriv]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-5"; sha256="0s1a221vwia92pinja2r5b5abm4dhcrs81m4frqnf0522qh0y75f"; depends=[coda rjags]; }; + bayesmodels = derive2 { name="bayesmodels"; version="0.1.1"; sha256="1m9428fzirpfzypd2zdcqhjv2cm05s3qmlxj4ymz6i1dg32svqzr"; depends=[BASS bayesforecast brms bsts cli crayon dials dplyr magrittr modeltime parsnip purrr rlang Rlgt rstan rstudioapi tibble timetk workflows]; }; bayesmove = derive2 { name="bayesmove"; version="0.2.0"; sha256="1ir8zasnymfll6za35kzsgdfm6l5hryrss2aa3m07zzd2rb53xbc"; depends=[dplyr dygraphs furrr future ggplot2 leaflet lubridate magrittr MCMCpack move progress purrr Rcpp RcppArmadillo rlang sf shiny tictoc tidyr]; }; - bayesplot = derive2 { name="bayesplot"; version="1.8.0"; sha256="0j69a78l5z0wyxcz607amaa4jc8kwwvcia9wxyir65b8ks9gj1d6"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; + bayesnec = derive2 { name="bayesnec"; version="2.0.1"; sha256="0kkqn14xzi4fqqasc7p0jwwxz4v3akaxiwa0m10wq8j78n2w2s1w"; depends=[brms dplyr evaluate extraDistr formula_tools ggplot2 loo purrr rlang tidyr tidyselect]; }; + bayesplay = derive2 { name="bayesplay"; version="0.9.2"; sha256="06i16a36b26p0r635bl37kvk7k083p970154yhkv80p7qc84n4sv"; depends=[gginnards]; }; + bayesplot = derive2 { name="bayesplot"; version="1.8.1"; sha256="0aman4273i8hy3z0qay1nrsr7v27m4icm1j6f4w59ylix80l5myq"; depends=[dplyr ggplot2 ggridges glue reshape2 rlang tibble tidyselect]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; bayesreg = derive2 { name="bayesreg"; version="1.2"; sha256="0yrx7y39xxmm0z4myj6ma24dkkhgcily5baxr6yf9balgvhd5wf4"; depends=[pgdraw]; }; + bayesrules = derive2 { name="bayesrules"; version="0.0.2"; sha256="0a1a1aq91ary985xd0qqc1sgjlyfcrjh7ngzcy4f7j09a7ch3j4b"; depends=[dplyr e1071 ggplot2 groupdata2 janitor magrittr purrr rstanarm]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayest = derive2 { name="bayest"; version="1.4"; sha256="1ax1z5aw0irpr5qmfscvbssrz58ablx0nkl0d9fx51f2g1cwm65n"; depends=[MCMCpack]; }; - bayestestR = derive2 { name="bayestestR"; version="0.9.0"; sha256="0msr24ymnazpaz8s9qs5v3xn1i9984p98lr9x4qq9cxgx34rm9h0"; depends=[insight]; }; + bayestestR = derive2 { name="bayestestR"; version="0.11.0"; sha256="0bwfw1lh4yp8y77sfmxzqqqy5aw59q1lqhfcssa46ph6d4hyxwic"; depends=[datawizard insight]; }; bayesvl = derive2 { name="bayesvl"; version="0.8.5"; sha256="1gb2in8hjiqb3daqz6phn1639i6p2w641kxrm3zh4rm3d6hg6hzr"; depends=[bayesplot bnlearn coda dplyr ggplot2 reshape2 rstan StanHeaders viridis]; }; bayfoxr = derive2 { name="bayfoxr"; version="0.0.1"; sha256="1295296mbjpmd0bg1pfxvyp0az3sry6gsq9ir3l8x64w5a4qrzd5"; depends=[]; }; baymedr = derive2 { name="baymedr"; version="0.1.1"; sha256="0lsp9g9xjwwf2znh4vld41pgdn55ncvmdsyg84ifhdqzjrsgwc6f"; depends=[rlang stringr]; }; baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; - baytrends = derive2 { name="baytrends"; version="2.0.4"; sha256="1rm6vx0mrmdppigzl0ig3ibni5lj5vv1ihn6ibhylm9fq16rqvyd"; depends=[dataRetrieval digest lubridate memoise mgcv plyr survival]; }; + baytrends = derive2 { name="baytrends"; version="2.0.5"; sha256="02cxb1iw6h0zj6f3qh52rndv50lvzkjbxnc7fqnkg022gximc201"; depends=[dataRetrieval digest lubridate memoise mgcv plyr survival]; }; bazar = derive2 { name="bazar"; version="1.0.11"; sha256="1q2w5pvlb51lzbb5k719sf1lrhffandkfqlcvi2prw4dmq7qjxv9"; depends=[kimisc]; }; bbdetection = derive2 { name="bbdetection"; version="1.0"; sha256="1j6xcbfsrg3wcr1rpddj7ia33szn5bs0wk4mzq42d761clsr5qq8"; depends=[ggplot2 Rcpp xtable zoo]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; bbl = derive2 { name="bbl"; version="0.4.0"; sha256="1xipzyz8gw0cnwwy0hspsbb6dby01rfyzafg5qvbg9a9f0j543f0"; depends=[pROC RColorBrewer Rcpp]; }; - bbmle = derive2 { name="bbmle"; version="1.0.23.1"; sha256="0p3l9shbr2846qmw8n0fyzf4j7gmi08aypl82jml3dwh26q1whk0"; depends=[bdsmatrix lattice MASS Matrix mvtnorm numDeriv]; }; + bbmle = derive2 { name="bbmle"; version="1.0.24"; sha256="1bck8rmink4wsk8pcbnj4d60svxymp29pxbzwj8p9gzsg42c1v81"; depends=[bdsmatrix lattice MASS Matrix mvtnorm numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; - bbotk = derive2 { name="bbotk"; version="0.3.2"; sha256="0bd9nxfgsj4ixpgky1mj6knb8l8nivvxpqpyw8vgpkj0za7gp4gr"; depends=[checkmate data_table lgr mlr3misc paradox R6]; }; + bbotk = derive2 { name="bbotk"; version="0.4.0"; sha256="09cw6z397laszsg5wsgpjh7jda74amqrcl2p25bgjg33ina2nvg7"; depends=[checkmate data_table lgr mlr3misc paradox R6]; }; bbreg = derive2 { name="bbreg"; version="2.0.1"; sha256="0wixhqfw8yp37874zwqb4vwi9xrzlkb761lbw7h70bds0dy6jcg5"; depends=[expint Formula pbapply statmod]; }; bbricks = derive2 { name="bbricks"; version="0.1.4"; sha256="1hv4hvnns9vgl6c3n7kg3g9mfcp26ksps29hdl5nwi28cgkx80w2"; depends=[]; }; - bbsBayes = derive2 { name="bbsBayes"; version="2.3.6.2020"; sha256="1h64lz95pkckqlmdsdnh6a4z42silj3lk6bl7rnnxdzb5ra6ra97"; depends=[dplyr geofacet ggplot2 ggrepel jagsUI latticeExtra progress rappdirs rgdal sbtools sf stringr]; }; + bbsBayes = derive2 { name="bbsBayes"; version="2.3.8.2020"; sha256="043wj15w7vb5xzwyrzfzf19n3iccly9mdw75lw176i3wfdnprhfv"; depends=[dplyr geofacet ggplot2 ggrepel jagsUI latticeExtra progress rappdirs rgdal sbtools sf stringr]; }; bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; - bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-4"; sha256="0bhwwr9pa78a8lhjz2cfbm09jq585p89l6dr2ihpil4q5r8cmsjr"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; + bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-5"; sha256="1jj7iag9azmxccc8a45vaxi6lw4jbfzj68wm0zdsggplgvzljn1f"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcTSNE = derive2 { name="bcTSNE"; version="0.10.0"; sha256="1109kgrrpizhg7j1wbkk6f84hsw89xk2l6vwxpjpg6rh50z3bfi6"; depends=[RSpectra Rtsne]; }; - bcaboot = derive2 { name="bcaboot"; version="0.2-1"; sha256="0wf1igkb0lidz4pvh3kfccs9858m1g9650wprrvrpwsdfrcd7rc9"; depends=[]; }; + bcaboot = derive2 { name="bcaboot"; version="0.2-3"; sha256="0b1m4lwi9hwd4xswabzyy2svc91ppiym8bi9f1wj79w5sg2hxpn7"; depends=[]; }; bcc = derive2 { name="bcc"; version="1.3.1"; sha256="0ac0wasdifd0v47r9sxrsix5hv7masiphn6dyxpqdrd11z7iimgz"; depends=[qcc]; }; - bccp = derive2 { name="bccp"; version="0.3.0"; sha256="06qmssf1hcnlssq8liyrh1fzvkfmlvqyagj0fia2g28jx90a7iir"; depends=[pracma]; }; + bccp = derive2 { name="bccp"; version="0.5.0"; sha256="0g9yzqzf977rx97c77krdhl7c499r58xcbzx0nihk73143ynf17w"; depends=[pracma]; }; bcdata = derive2 { name="bcdata"; version="0.2.4"; sha256="07l47gpzd6r465xad1bc0w44yzy87qa3j0vpa6pv61h30pph43zh"; depends=[cli crul DBI dbplyr dplyr glue jsonlite leaflet leaflet_extras purrr readr readxl rlang sf tibble tidyselect xml2]; }; bcf = derive2 { name="bcf"; version="1.3"; sha256="1f8szjgsyhnff3zzmmy7bnsam12ywj46n3fxsj1y3fn1m5wnd8mz"; depends=[Rcpp RcppArmadillo]; }; bcfrailph = derive2 { name="bcfrailph"; version="0.1.0"; sha256="0l5v3bc8xw71cj012sbmq1f0glg7m545jzqyg01gzl8kbgm3lbbj"; depends=[survival]; }; @@ -6026,20 +6251,22 @@ in with self; { bcp = derive2 { name="bcp"; version="4.0.3"; sha256="0vhs89lb2wpanqsljclpvwbjmgdsc3jicws8bzqiqh8mbs3nzpxy"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; + bcputility = derive2 { name="bcputility"; version="0.2.0"; sha256="0aybhgi6pnl9xzx0gvinsj4g2gvnpxssar2v7imdz5yqsdvcw6yr"; depends=[data_table DBI odbc sf]; }; bcrm = derive2 { name="bcrm"; version="0.5.4"; sha256="1j8bfa3x7h77vs41k4nqbqlb961szp1fkhc181wzb3zpbnzmjhhy"; depends=[ggplot2 knitr mvtnorm rlang]; }; bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; bcv = derive2 { name="bcv"; version="1.0.1.4"; sha256="1iln1blr2sdjjv66g73jkj26h1kzfs2sfvw5k7b76mgc0703k45s"; depends=[]; }; bdDwC = derive2 { name="bdDwC"; version="0.1.15"; sha256="0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0"; depends=[shiny shinyBS shinydashboard shinyFiles shinyjs]; }; - bda = derive2 { name="bda"; version="15.2.2"; sha256="19lccvv3c1fmxy05idlh9ci70056l6i6nmwlwnj405zqripk42kl"; depends=[boot]; }; + bda = derive2 { name="bda"; version="15.2.5"; sha256="19m7xrsckw0lncmi0qsmy194f2c9lmi1vac37h9jfvkb3i30fx20"; depends=[boot]; }; bdchecks = derive2 { name="bdchecks"; version="0.1.7"; sha256="1pzsvn1m1f9bdmhxmh57pvn9jm4z41rkvv6h60hq2lfgkapnjy7q"; depends=[bdDwC data_table DT finch knitr rgbif shiny shinyBS shinydashboard shinyjs spocc yaml]; }; bdclean = derive2 { name="bdclean"; version="0.1.15"; sha256="14cy8yaqd6bg2zyh2wvndydk9sigaydavxl4cfypqz5kqdhj82z9"; depends=[bdchecks bdDwC data_table DT finch knitr leaflet rgbif rmarkdown shiny shinydashboard shinyjs spocc]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; bdl = derive2 { name="bdl"; version="1.0.3"; sha256="1p33lx50789v2k2j3c95n5pzzgxrn3lb9w6a6kx710p8cbbdyfxp"; depends=[dplyr ggplot2 ggpubr httr jsonlite magrittr purrr randomcoloR sf tibble tidyr tmap tmaptools]; }; bdlp = derive2 { name="bdlp"; version="0.9-2"; sha256="14fxwgcn3g6k1cdimgfp6zmsgqi4s7sh6kapnls229qiin2nijjl"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; }; bdots = derive2 { name="bdots"; version="1.0.1"; sha256="014gxykqfh8lnbdz9w6ir8jsrb5bklgww4qhapzadym06n69c86x"; depends=[data_table mvtnorm nlme]; }; - bdpar = derive2 { name="bdpar"; version="3.0.0"; sha256="128s13nrr0djcwxj55y5xdfrzq5gbq9czmvgmdbfjzpshjhndi0k"; depends=[digest R6 rlist]; }; + bdpar = derive2 { name="bdpar"; version="3.0.1"; sha256="05si6164gbnx6lbjyzd40zpg0q4hfhirzwa7ica9rbj8l73j6zpw"; depends=[digest R6 rlist]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.3"; sha256="0wcnmamqrbqwskgv2yhnxq2kb179n63c825y9hsl20rfca0ijh6m"; depends=[]; }; + bdrc = derive2 { name="bdrc"; version="1.0.0"; sha256="16pg0pqc16kd0ziygn8qw915fgrhi3yhdl5cyhrcpdjspyd7g6zd"; depends=[ggplot2 gridExtra rlang scales]; }; bdribs = derive2 { name="bdribs"; version="1.0.4"; sha256="19qakmdw3l8vfxkr4p1ydkyfs4cmq37lqzw7l5zx5rdn6zlhqwh4"; depends=[rjags]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-4"; sha256="1sh6pg43rgqvips4fx0k4vmp5i9lmniix0bqwj2yq5m06gs227i5"; depends=[]; }; @@ -6051,17 +6278,18 @@ in with self; { beakr = derive2 { name="beakr"; version="0.4.3"; sha256="0l6475l5d58g5ahz4b3vrdlvl656p2rasni17gz4y1l2rd0pvvh4"; depends=[base64enc httpuv jsonlite magrittr mime R6 stringr webutils]; }; beam = derive2 { name="beam"; version="2.0.2"; sha256="17c7zww1160jxm0q6vb5h59zipjjfyc3pls30y5v4vyk7kr9rdvx"; depends=[assertthat BH fdrtool igraph knitr Matrix Rcpp RcppArmadillo]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; + beans = derive2 { name="beans"; version="0.1.0"; sha256="12kxd6hnag93whncmab17yrqiif644lzbl1ramz8kz21mqvkjsfw"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.4"; sha256="18i4ygz83l60fdfkl4yg9kp5n2vmqn6yd7qkpkiplq0mzg5s4nk9"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; - beastier = derive2 { name="beastier"; version="2.2.1"; sha256="004lvqiaggpvvypqgjklydv7cfxbf4wgv9sldlxgg01pszp4c8dg"; depends=[ape assertive beautier phangorn pryr rappdirs remotes rJava stringr xml2]; }; - beautier = derive2 { name="beautier"; version="2.4"; sha256="0wd9k1faw604mbgsp6bkp85cqd0plprcc35wxwrqp6zi78p2qga8"; depends=[ape assertive pryr rappdirs seqinr stringr testit]; }; + beastier = derive2 { name="beastier"; version="2.4.8"; sha256="003mbykkmgaan7p5yw2skrrf5l08y4llsl848slc2qwv7va46pv4"; depends=[ape assertive beautier devtools phangorn rappdirs readr rJava stringr tibble xml2]; }; + beautier = derive2 { name="beautier"; version="2.6.2"; sha256="1h0irqbs2l35k1lzia4cgpdxqaipgddpicq23js7q6zlvq2s1ij7"; depends=[ape assertive pryr rappdirs seqinr stringr testit]; }; bedr = derive2 { name="bedr"; version="1.0.7"; sha256="0zpqvyjgwyqawxm8qrhcv8zq2b3yxgcqkkc87br29yrl7sjb8h6j"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.3"; sha256="061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp"; depends=[audio stringr]; }; - beeswarm = derive2 { name="beeswarm"; version="0.3.1"; sha256="1jsggypyww77hkcic03kdb3fp8h938qs142xi0lapzh62bkn2pjj"; depends=[]; }; + beeswarm = derive2 { name="beeswarm"; version="0.4.0"; sha256="016mqcbdksialkmap56rprzna9b6cd6896ml9gl2n2h8yjdk7x2i"; depends=[]; }; beezdemand = derive2 { name="beezdemand"; version="0.1.0"; sha256="1i6p36cfvz87k6llpibklmdbjb7vp1v38ijxaqkmv1jzc28sj3cl"; depends=[ggplot2 nlmrt nls2 nlstools reshape2]; }; befproj = derive2 { name="befproj"; version="0.1.1"; sha256="194kicmfxamy061zx0ljmvrlh8gm56fcmhj1j2qfrihklpab4xhx"; depends=[dplyr]; }; beginr = derive2 { name="beginr"; version="0.1.7"; sha256="1a1lzjmq0qimm8yrb4n6knh23gyqxgax60n95rih95sg34904d0m"; depends=[cranlogs]; }; - behaviorchange = derive2 { name="behaviorchange"; version="0.4.0"; sha256="0jfh665za6fs40x0fsjya7k8jwmw841xc00g31pm2qn52srfwfwj"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets4 gridExtra gtable knitr rmdpartials ufs viridis yum]; }; + behaviorchange = derive2 { name="behaviorchange"; version="0.4.3"; sha256="19kdwwzfd1cg9aycd2fnwc5dczrygclgpa6f7bri43lzcrsfbsgy"; depends=[BiasedUrn data_tree DiagrammeR DiagrammeRsvg ggplot2 googlesheets4 gridExtra gtable knitr rmdpartials ufs viridis yum]; }; behavr = derive2 { name="behavr"; version="0.3.2"; sha256="01ny099m2zmvlalwiq3nqkgynnxn1mdspch15lkawwd40q8s9s4p"; depends=[data_table]; }; belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; belg = derive2 { name="belg"; version="1.4.1"; sha256="0ql1hir834hljr58gbi4gxgf939dnd7rpmyp1pxkg0042in4h0p0"; depends=[raster Rcpp RcppArmadillo]; }; @@ -6072,19 +6300,20 @@ in with self; { benchmarkmeData = derive2 { name="benchmarkmeData"; version="1.0.4"; sha256="1n4vjkagqlm6kw2hilf4gjfcdjad0bcg652j9nl2ygbq3kdnh1vf"; depends=[dplyr tibble]; }; benchr = derive2 { name="benchr"; version="0.2.5"; sha256="1xh1n41ll50zz3v26i8lg5f92i90rc78ywnl0rczryh621whx80n"; depends=[Rcpp RcppProgress]; }; bender = derive2 { name="bender"; version="0.1.1"; sha256="07npksrj094h884lli0fjvwjc1lhcwzlsk9wx82761mka5xajv4v"; depends=[httr jsonlite R6]; }; - benford = derive2 { name="benford"; version="0.2.0"; sha256="0jklrhx0k03x3y58jqdw43s3b83fcm3b1l3hjv5b8flankny5763"; depends=[]; }; + benford = derive2 { name="benford"; version="1.0.1"; sha256="0phy3bk89bn4p69mym9lrb04cfavdb1rl47yy44qp4g2w1028dqw"; depends=[]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.5"; sha256="0y0c7l2r9s7lg9bw4ndcqwisa5l6a2cpydn1vmz88h3yva0l68cg"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; benthos = derive2 { name="benthos"; version="1.3-6"; sha256="1vywnc6k37gpaq7g59v3qa6619svcmnd8ri5zm5l0ila2s3ccb2c"; depends=[dplyr lazyeval readr]; }; berryFunctions = derive2 { name="berryFunctions"; version="1.20.1"; sha256="03kccwvkc5nwpyg97dsigmwgk8nwk4j9rpn2z8gc71pcf2b3ixyj"; depends=[abind]; }; - bestNormalize = derive2 { name="bestNormalize"; version="1.7.0"; sha256="1r6fy7ijq7gh0vvbmmjrq0sgqm80m5kp250gdlimy5cgy95q6w67"; depends=[butcher doParallel doRNG dplyr foreach LambertW nortest purrr recipes tibble]; }; + bestNormalize = derive2 { name="bestNormalize"; version="1.8.2"; sha256="0pbyn0ay43jcxssxgvivvfakcwq0y23c2qq6a01656q9lqbv9f1r"; depends=[butcher doParallel doRNG dplyr foreach LambertW nortest purrr recipes tibble]; }; bestSDP = derive2 { name="bestSDP"; version="0.1.2"; sha256="1rff6jij9wmlpalzilvid8jvj2pczrchx0yrg0vhy00j64zg6jzs"; depends=[dplyr DT ggplot2 readxl rlist shiny shinyBS shinydashboard shinyjs shinythemes shinyWidgets stringr tidyr]; }; bestglm = derive2 { name="bestglm"; version="0.37.3"; sha256="1zncy958hlwyyxrp6yvq1inq6mpyrbr6cdkf8maijfirr5j8f0ya"; depends=[glmnet grpreg lattice leaps pls]; }; - bestridge = derive2 { name="bestridge"; version="1.0.5"; sha256="15p46a1niir9dda6kh36iwr7bhaw102gyww5risaq2zxs7qn90c1"; depends=[MASS Matrix pheatmap Rcpp RcppEigen survival]; }; + bestridge = derive2 { name="bestridge"; version="1.0.6"; sha256="1jxkiana47ry295qw2fv3vqpspw85s4wd2isgqnsnm1h2spjms4m"; depends=[MASS Matrix pheatmap Rcpp RcppEigen survival]; }; + betaBayes = derive2 { name="betaBayes"; version="1.0"; sha256="15dp5dd0sw613xjkdfqw4iizfdagflp0qwykmng8ml6agwd21s4p"; depends=[betareg coda Rcpp RcppArmadillo]; }; betaboost = derive2 { name="betaboost"; version="1.0.1"; sha256="1zdyzxl2kp2i5lkiz280wz4av9wqklbn25zmq6n4yb6a579yjfn8"; depends=[gamboostLSS mboost]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; - betafunctions = derive2 { name="betafunctions"; version="1.5.0"; sha256="0q35n55g8p6mncbgs66sn3l4cv348wzbr9y99dz9vg656iq8bcxk"; depends=[]; }; + betafunctions = derive2 { name="betafunctions"; version="1.6.1"; sha256="051d4fryvcdfbsm087mxqlx247jz671wx5rffsffg828azj2mxh9"; depends=[]; }; betalink = derive2 { name="betalink"; version="2.2.1"; sha256="1wskr8nh1jzcrnc8fn58lscphsvj5z9p1i1pnpfdjn60mdb09rkp"; depends=[igraph plyr stringr]; }; betapart = derive2 { name="betapart"; version="1.5.4"; sha256="1m2rykch2vhh90s08s9s2kmmrxhp9ik32s5zkdw8991cbw2j7n68"; depends=[ape doSNOW fastmatch foreach geometry itertools picante rcdd snow]; }; betaper = derive2 { name="betaper"; version="1.1-2"; sha256="0gh5xjimg0wgv626g3y34mvgrji2aylnm89iwadg7d6g4s457ynp"; depends=[vegan]; }; @@ -6092,16 +6321,16 @@ in with self; { betategarch = derive2 { name="betategarch"; version="3.3"; sha256="0hqvyps3lwix2fkzk18wrkhxpqhgardvib9sq1ip8gn8sn1dsi8y"; depends=[zoo]; }; bethel = derive2 { name="bethel"; version="0.2"; sha256="1zlkw672k1c5px47bpa2vk3w2906vkhvifz20h6xm7s51gmm64i0"; depends=[]; }; bets_covid19 = derive2 { name="bets.covid19"; version="1.0.0"; sha256="1pqa6zpkkcmnm9a4m3676css0fi2lp4ik6mmhfhnsr4v4kv2pq2s"; depends=[rootSolve]; }; - bettermc = derive2 { name="bettermc"; version="1.1.1"; sha256="14s5whphq5qphcavyp1fm912xxnryhv7d41b6d2vq9z5bwp595vg"; depends=[checkmate]; }; + bettermc = derive2 { name="bettermc"; version="1.1.2"; sha256="1g264b21kh5kf0v5qk09gf3ya0amblwnqlpw93h6g0k0dd3vks0h"; depends=[checkmate]; }; beyondWhittle = derive2 { name="beyondWhittle"; version="1.1.1"; sha256="1nr414wvfwycp3s9v592jd4gk5wdjfklk7ypqabx73k5fsxrcc0g"; depends=[BH forecast ltsa MASS MTS Rcpp RcppArmadillo]; }; bezier = derive2 { name="bezier"; version="1.1.2"; sha256="1vw5128v8h973xwa1fdm9cw2jvrldj87nd55lddlp3qsz3ag4br6"; depends=[]; }; - bfast = derive2 { name="bfast"; version="1.6.0"; sha256="18v9d7qcbhva08r1zrpfvrqwrn0g3r4dz53gw8fjspcm0lrpsmlh"; depends=[forecast Rcpp Rdpack strucchangeRcpp zoo]; }; + bfast = derive2 { name="bfast"; version="1.6.1"; sha256="1vjklk7d9b0q7j348aqvspm7rn80bh06hz66r2z1qs9436ppkx5a"; depends=[forecast Rcpp Rdpack strucchangeRcpp zoo]; }; bfp = derive2 { name="bfp"; version="0.0-42"; sha256="19azhsaa1cgpz2zs5ijmr1pcbcqjlmc0w990hbbwkk79bpc3dpn4"; depends=[Rcpp]; }; bfsMaps = derive2 { name="bfsMaps"; version="0.9.6"; sha256="0k3bwda32j0rfdkzddqf81mpaa1z73cm05xh19psa51vgrbn9gg9"; depends=[DescTools maptools rgdal rgeos rlang sp spdep]; }; - bfsl = derive2 { name="bfsl"; version="0.1.0"; sha256="1hl53nis8bb1ffgkx91ij9vh680cpkb80y548y67y9w18iyd4aw4"; depends=[]; }; + bfsl = derive2 { name="bfsl"; version="0.2.0"; sha256="10z3w1fk4va2ajvpnqp0llgw4a047iaya6xi57if1a7jd7r1jxfh"; depends=[generics]; }; bfw = derive2 { name="bfw"; version="0.4.1"; sha256="1dwl6p70wbgippysl7vk8nv6rc78f6h5xl8fna98zv99qf0ib31c"; depends=[coda MASS runjags]; }; bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; }; - bggAnalytics = derive2 { name="bggAnalytics"; version="0.1.1"; sha256="1bkyq11wv2hhb5f34668b2ii19kp5ah4jg38lynrxc8y3b7q1kbp"; depends=[assertthat data_table pryr R6 rvest stringr xml2]; }; + bggAnalytics = derive2 { name="bggAnalytics"; version="0.2.0"; sha256="01wflzgb2156xaial47ms740xaddvx9anyv8vv760dw2r79wfac0"; depends=[checkmate data_table pryr R6 stringr xml2]; }; bggum = derive2 { name="bggum"; version="1.0.2"; sha256="04vr9z81awavkhk3lbi8yasmi242lrbnq0pzqp38xlrn5xkf8b1w"; depends=[Rcpp RcppDist]; }; bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.8.4"; sha256="1r8qd4niah18jg0lw3vqq1465likal5j7nvlgnblpidd5svn4a2n"; depends=[car combinat lattice mvtnorm]; }; @@ -6110,15 +6339,18 @@ in with self; { bhm = derive2 { name="bhm"; version="1.16"; sha256="097vfpqkkbgps9wkabc1k18fa5vv0shbn1jz6g5l96xv96nvx93w"; depends=[coda ggplot2 MASS survival]; }; bhmbasket = derive2 { name="bhmbasket"; version="0.9.2"; sha256="03xd2bglwksa4mmyq8mg286bxlc5ghsy66i3v1nlhng63lflp9wb"; depends=[doParallel foreach R2jags]; }; bhpm = derive2 { name="bhpm"; version="1.7"; sha256="0fhk2gmghibf7la864dzm19bm76525gzbj03vw0y0zwbv9shbpcp"; depends=[coda]; }; + biClassify = derive2 { name="biClassify"; version="1.2"; sha256="05w22cv8w733xp79ciywih5cbv3fl6kzkbwwmrf44l1vdcnv3dsn"; depends=[DAAG expm fields MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; bib2df = derive2 { name="bib2df"; version="1.1.1"; sha256="0d57883df774qqwpssmly3f1gci32yc5sgwc3x8f2rjih23s1nf6"; depends=[dplyr httr humaniformat stringr]; }; - bibliometrix = derive2 { name="bibliometrix"; version="3.0.4"; sha256="05dcx6vfghip9ys7mh6vvxvyyc5cfcqs8g9ihjkiw1gk6z47c87v"; depends=[bibliometrixData dimensionsR dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 pubmedR RColorBrewer rio rscopus shiny SnowballC stringdist stringr tidyr]; }; + biblio = derive2 { name="biblio"; version="0.0.2"; sha256="1yx90cmkcm5vran3n0p8l3hz9sqny7bhzgvnlsa8f4fddh0ah78p"; depends=[stringr yamlme]; }; + bibliometrix = derive2 { name="bibliometrix"; version="3.1.4"; sha256="14s1mn0j9120m1nh46380qbffy6d4zcx9ii3axbcwmhry0yr2ndw"; depends=[bibliometrixData dimensionsR dplyr DT factoextra FactoMineR forcats ggplot2 ggrepel igraph Matrix openxlsx plotly pubmedR RColorBrewer readr readxl rscopus shiny SnowballC stringdist stringr tidyr tidytext]; }; bibliometrixData = derive2 { name="bibliometrixData"; version="0.1.0"; sha256="0fdfgqsfiq3iacj4vb3bvx98waqzqxdsn2ds8wq86a30lm055d7n"; depends=[]; }; biblionetwork = derive2 { name="biblionetwork"; version="0.1.0"; sha256="0nhx9bk7r5l0bvj98clnmwf53ihghf48zai4nj6pcgr2rb69fvjj"; depends=[data_table Rdpack]; }; bibtex = derive2 { name="bibtex"; version="0.4.2.3"; sha256="0vdwx6808r73pk15263f33bkqbfmb08d8jkmr4d7h4ml414ikbbv"; depends=[stringr]; }; biclique = derive2 { name="biclique"; version="1.0.5"; sha256="1fdf2r1jc2x8yw0fcw7yyjdxz4b870w6y7mr68qixqxwpl6943zq"; depends=[]; }; - biclust = derive2 { name="biclust"; version="2.0.2"; sha256="1pk7mvwlg4hkc4cn4w6wr2c192qx03d1xfwlzclk5bw1nmcg483b"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; - biclustermd = derive2 { name="biclustermd"; version="0.2.2"; sha256="00d7lhkcr9bj45zwpm78hdp3qllfisx097dsql3g64v9ix2q44g5"; depends=[biclust clusteval doParallel dplyr foreach ggplot2 magrittr nycflights13 phyclust tidyr]; }; + biclust = derive2 { name="biclust"; version="2.0.3"; sha256="0lgyc2f04dhr65cwga78pradxsdzgjrpp8vphchqn60ab1z95dlp"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; + biclustermd = derive2 { name="biclustermd"; version="0.2.3"; sha256="1knhz96k5giq3d16i3akl5gbxrzx3vxm97cb3ivaw835fr9zrmr5"; depends=[biclust doParallel dplyr foreach ggplot2 magrittr nycflights13 phyclust tidyr]; }; + bidask = derive2 { name="bidask"; version="0.1.0"; sha256="1npiz3nmbly0lhha90b6v2ml8fmi32rdjr6bx7f008aa9p4cpcip"; depends=[xts zoo]; }; bife = derive2 { name="bife"; version="0.7.1"; sha256="0d1hfzji3769nsa5xvlmn7sbn21igwx3aa7vxlcdn1b9ykh7fx76"; depends=[data_table Formula Rcpp RcppArmadillo]; }; bifurcatingr = derive2 { name="bifurcatingr"; version="1.0.0"; sha256="0msbdr2m4xmvnd00yklk2b8c8qwr11d5gc1x22sqd16fgj9y0qvf"; depends=[igraph MASS]; }; bigGP = derive2 { name="bigGP"; version="0.1-6"; sha256="0fwm06rzx1qbh16ii93x26i4v4yb50jk67k3qmzyr3gr4z9b9xhg"; depends=[Rmpi]; }; @@ -6126,8 +6358,9 @@ in with self; { bigQueryR = derive2 { name="bigQueryR"; version="0.5.0"; sha256="051c8rkj77dm78237dzhf3lcdawv0xv72pwfiim9bi89z9mp6f9m"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; bigSurvSGD = derive2 { name="bigSurvSGD"; version="0.0.1"; sha256="08i6hwfr4rpvmxfa0vx8bi2dsa63iasj049ndwfn6zgvai6qaz0s"; depends=[bigmemory doParallel foreach Rcpp survival]; }; + bigalgebra = derive2 { name="bigalgebra"; version="1.0.1"; sha256="1lm9i1ric2baywpvnx0zza1vfp7wcan27n96x6cg9q5018fjczpz"; depends=[BH bigmemory Rcpp]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.21"; sha256="19drir6vclzz1ffccvnkxnmiqnwmddiqm7y64pz4j6ifxpc1igfy"; depends=[BH biglm bigmemory foreach Rcpp]; }; - bigassertr = derive2 { name="bigassertr"; version="0.1.4"; sha256="05s0l655d1zx6srd0bgmrdhx02kd3r8glv7m7d0q65h5jn75im8l"; depends=[]; }; + bigassertr = derive2 { name="bigassertr"; version="0.1.5"; sha256="00vdg8r4nv495kqdskig0hd1b7m93fygx8xjr7lvaav0lkxlaim9"; depends=[]; }; bigchess = derive2 { name="bigchess"; version="1.9.1"; sha256="1vdzx185y1agh1xjf7qcfi2s6l7qzm1kx6b2kr3cbz2in88bws3n"; depends=[processx]; }; bigdatadist = derive2 { name="bigdatadist"; version="1.1"; sha256="16gkybwcp9sxqb0iic2fhmc4gndr44ayg14wrfcjvjaj4g5r6xs2"; depends=[FNN MASS pdist rrcov]; }; bigdist = derive2 { name="bigdist"; version="0.1.4"; sha256="1qfnmhyfadmnnagbhdl4jjrb53i1srszf19idp8fy6bczbjq85yi"; depends=[assertthat bigstatsr furrr proxy]; }; @@ -6139,20 +6372,22 @@ in with self; { bigmds = derive2 { name="bigmds"; version="1.0.0"; sha256="0abv8z9c8dqqpcdgrksym4wqmndzzrvcn8h9szzan9imry96j0gg"; depends=[pdist]; }; bigmemory = derive2 { name="bigmemory"; version="4.5.36"; sha256="03pg8mxdc7q0249visjmc8bc3xmwxsfg3i2n6higicj4cfz7zihq"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; + bignum = derive2 { name="bignum"; version="0.2.2"; sha256="1q9g4z15agnrymcam79j4cnxifc17xz7jf89l05hq86vycyhmbsk"; depends=[BH cpp11 rlang vctrs]; }; bigparallelr = derive2 { name="bigparallelr"; version="0.3.1"; sha256="149nqavxm1cks5qgdhazxnzl27v9g6pn2w1s1bnra2dnshm69i63"; depends=[bigassertr doParallel flock foreach parallelly RhpcBLASctl]; }; bigreadr = derive2 { name="bigreadr"; version="0.2.4"; sha256="0650mbgbzl2582d02ma3kd8iqdimjajk9gnx70hdjl489q15w80f"; depends=[bigassertr data_table parallelly Rcpp]; }; - bigrquery = derive2 { name="bigrquery"; version="1.3.2"; sha256="16whccv7f94vf57dvbbrhdskz3nnbmpa11a14kp7aynckldlfy0v"; depends=[assertthat bit64 curl DBI gargle glue httr jsonlite prettyunits progress rapidjsonr Rcpp rlang tibble]; }; - bigsnpr = derive2 { name="bigsnpr"; version="1.6.1"; sha256="1jvj20xnd16h986q6b4nqzshw1i4zcgyybfrxdfl1c9mr7f1q0rw"; depends=[bigassertr bigparallelr bigreadr bigsparser bigstatsr bigutilsr data_table foreach ggplot2 magrittr Matrix Rcpp RcppArmadillo rmio vctrs]; }; - bigsparser = derive2 { name="bigsparser"; version="0.4.4"; sha256="0f1272lh9kvbqwgm02ffx80fgvdwsa5i8qf5ki4mmp247kl3h368"; depends=[bigassertr Rcpp RcppEigen rmio]; }; + bigrquery = derive2 { name="bigrquery"; version="1.4.0"; sha256="02msq61l7vamzpvbhvalh3qil1aa7pr68pwpsivbb6pvz6p4zyns"; depends=[assertthat bit64 curl DBI gargle glue httr jsonlite lifecycle prettyunits progress rapidjsonr Rcpp rlang tibble]; }; + bigsimr = derive2 { name="bigsimr"; version="0.11.2"; sha256="1mygsc865hki6z2bilvbnymk8r4p73ams7iah9qpqi0ap6cqqz8p"; depends=[JuliaCall]; }; + bigsnpr = derive2 { name="bigsnpr"; version="1.8.1"; sha256="1kwzphhhc3rmczv426sz67hsyfp67mbrhgna406fvw50p7ql76d8"; depends=[bigassertr bigparallelr bigreadr bigsparser bigstatsr bigutilsr data_table foreach ggplot2 magrittr Matrix Rcpp RcppArmadillo rmio vctrs]; }; + bigsparser = derive2 { name="bigsparser"; version="0.5.0"; sha256="0g6fbhgc51jb2rnccimnsz3y0ivq9ylgk1rnm863l4hyc43balhp"; depends=[bigassertr Rcpp RcppEigen rmio]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-1"; sha256="1kf04p2lglzdi1fdryk27nmj2a2jca2ii7ki8vak93sq21isb179"; depends=[quadprog]; }; bigstatsr = derive2 { name="bigstatsr"; version="1.5.1"; sha256="0vw7bdbx08k4ny02f90km3snhgzv2hqkskqlc3x68xzw6zd762w0"; depends=[bigassertr bigparallelr cowplot foreach ggplot2 ps Rcpp RcppArmadillo rmio RSpectra tibble]; }; bigstep = derive2 { name="bigstep"; version="1.0.3"; sha256="0ygp1vljqqn5vzpjxlv9d6fxxv3bi2kfyqfs1gf0jgxwb9417b82"; depends=[bigmemory magrittr matrixStats R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; - bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; + bigtime = derive2 { name="bigtime"; version="0.2.1"; sha256="08vgi0q194sjg5arhfp3nahv11ry5phj9j1w9a5y35xm3ds8acyg"; depends=[corrplot dplyr ggplot2 magrittr Rcpp RcppArmadillo RcppEigen tidyr]; }; bigutilsr = derive2 { name="bigutilsr"; version="0.3.4"; sha256="096h0v277n39bvipfbfd730lz3qkplfnv58zmzsyy3al9f7lajxl"; depends=[bigassertr bigparallelr nabor Rcpp robustbase RSpectra]; }; bikeshare14 = derive2 { name="bikeshare14"; version="0.1.4"; sha256="1ca8w4yfw0bfqls0g1qqh8gkyk23d0mi22kavawv9wwhydxrxxjc"; depends=[]; }; - bikm1 = derive2 { name="bikm1"; version="1.0.0"; sha256="1pj41d59n3iflwc4iwnwv6g2vhjs9498k85cml7jwb814xpl9jsj"; depends=[ade4 ggplot2 gtools pracma reshape2]; }; + bikm1 = derive2 { name="bikm1"; version="1.1.0"; sha256="1ffw7vfl7cpj6n6c3hrnn4pjnwmw623xdj469fh61q6c2ig5sq87"; depends=[ade4 ggplot2 gtools lpSolve pracma reshape2]; }; bild = derive2 { name="bild"; version="1.2-0"; sha256="0aygx77fn2w249q6ghpxclhm9xb2ngdzrirldr3lpidg6ivc443v"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; billboarder = derive2 { name="billboarder"; version="0.3.1"; sha256="189ngvg84rcwhrivxskmjv3srhadvzr4p1v8pf11axyv2qn01b0x"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr rlang scales shiny]; }; @@ -6186,11 +6421,11 @@ in with self; { binsegRcpp = derive2 { name="binsegRcpp"; version="2020.9.3"; sha256="0vkvczm32nx67aw1mw53yc6jlbsk70faa5mvwq6k6bzv3nb2c48a"; depends=[data_table Rcpp]; }; binseqtest = derive2 { name="binseqtest"; version="1.0.3"; sha256="0661a2bqmv6bckq23c6m04ggwrp8z10lfgjg9dgkz4bfxsd297gs"; depends=[clinfun]; }; binsmooth = derive2 { name="binsmooth"; version="0.2.2"; sha256="1sidv8ra377glaacib1j4ksg5bg759hk7h6fadrfzip3hgxgjg9x"; depends=[ineq pracma triangle]; }; - binsreg = derive2 { name="binsreg"; version="0.2.0"; sha256="031a794bkb9qdy51p4jgjg3hvh8ga0hwakcdrjn0hv4ls9f5gsm7"; depends=[ggplot2 sandwich]; }; + binsreg = derive2 { name="binsreg"; version="0.6"; sha256="1g1d769yiw66qshnwzpqcr3isn1x6jb0mg45j3h2xp8b1dj1cala"; depends=[ggplot2 matrixStats quantreg sandwich]; }; binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-6"; sha256="1hs11c9qpdsl1awgk3b34mcsnr8g1xpg3zd9dlrqrz6ppdqkgxmn"; depends=[]; }; - bio3d = derive2 { name="bio3d"; version="2.4-1"; sha256="07rw6c2d95gb5myxh31727j0jrchd0xisa3x89jjmf4zzs3vv7v7"; depends=[Rcpp]; }; - bioC_logs = derive2 { name="bioC.logs"; version="1.1"; sha256="18v8hj426vdfz30jifhd17fv65w5nv0f55ff9r8s2ahi6qv3w828"; depends=[]; }; + bio3d = derive2 { name="bio3d"; version="2.4-2"; sha256="1jvcmpzi9knhxq5jsbhg8slm8hnlx2y8smmwwrbnbyd0rmk5fhci"; depends=[Rcpp]; }; + bioC_logs = derive2 { name="bioC.logs"; version="1.2"; sha256="16hbw8mbr3nn1k7hr8ihp4lcvd22jk396kbaw2jjd1gw9lvbhicd"; depends=[]; }; bioOED = derive2 { name="bioOED"; version="0.2.1"; sha256="0wx58bngpzlrbbcnx8l1lqhsg51y98wcym1238p87drf64x2mj1n"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR rlang tidyr tidyselect tidyverse]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; bioRad = derive2 { name="bioRad"; version="0.5.2"; sha256="1kx1vh6p37170f1crylwyzap0c7s5d82rx7qqi95f8d26niqcjn9"; depends=[assertthat curl data_table fields ggmap ggplot2 lubridate lutz maptools raster rgdal rhdf5 sp tidyr viridis viridisLite]; }; @@ -6200,23 +6435,23 @@ in with self; { biogas = derive2 { name="biogas"; version="1.23.2"; sha256="05g6nyi872skvr34kw5c71ggnnjc3fv95imc327yjqhmqmwx3m19"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; biogram = derive2 { name="biogram"; version="1.6.3"; sha256="1y7yaa6xwv11b6a4qf4qb3d7rsz0yiiq1k5mb0dbm3avydnl9c4b"; depends=[combinat entropy partitions slam]; }; - biogrowth = derive2 { name="biogrowth"; version="0.2.0"; sha256="0zz5m77wahb1x1psqay9d5gzvx343jqzl8lf5n2043sc7qnk8s3r"; depends=[cowplot deSolve dplyr FME formula_tools ggplot2 lamW MASS purrr rlang tibble tidyr]; }; + biogrowth = derive2 { name="biogrowth"; version="0.2.3"; sha256="09nq71fmm06vxs9sd4vmy5jrdb537qh385vsn6p6blwj19qbc7hj"; depends=[cowplot deSolve dplyr FME formula_tools ggplot2 lamW MASS purrr rlang tibble tidyr]; }; bioimagetools = derive2 { name="bioimagetools"; version="1.1.5"; sha256="1qscyfm7mx9v9ag3hdyyvn7vwnfvms9dc1qffbyby9fr9rj3gs3q"; depends=[EBImage httr tiff]; }; bioinactivation = derive2 { name="bioinactivation"; version="1.2.3"; sha256="0gz1bbakf6b23jsbvrr8314yxajxcr1akm5srgm883lrf1p5ax13"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS purrr rlang]; }; biokNN = derive2 { name="biokNN"; version="0.1.0"; sha256="113lynbxmv88ycvbsq9drn2f75md7yajhicfw8qd8l6lawiq1fqc"; depends=[cluster desc dplyr ggplot2 lme4 magrittr mice mitml tidyr]; }; biolink = derive2 { name="biolink"; version="0.1.7"; sha256="1i9aisvb3lvljird89fy9fx7h3s1wi6dpilycbynqyhz8xqnnszj"; depends=[DBI glue memoise rentrez RMySQL xml2]; }; biomartr = derive2 { name="biomartr"; version="0.9.2"; sha256="12bw15hvjg7fbrq1mwn2xgzbplydy8rlq982hs118mlwdrlqb06q"; depends=[biomaRt Biostrings curl data_table downloader dplyr fs httr jsonlite philentropy purrr R_utils RCurl readr stringr tibble XML]; }; - biomod2 = derive2 { name="biomod2"; version="3.4.6"; sha256="0nvxg0a78ynydx3wd16vaildw9x4hiagmx4wkrwkzbyhyi2pgza1"; depends=[abind caret checkmate dismo doParallel dplyr earth ENMeval foreach gbm ggplot2 lattice MASS maxnet mda nnet PresenceAbsence pROC purrr randomForest raster rasterVis reshape rlang rpart sp tidyr]; }; + biomod2 = derive2 { name="biomod2"; version="3.5.1"; sha256="065cq36phf7ncd1na440f50aa467qbwkb7pchabsan05k3zk7v9h"; depends=[abind caret checkmate dismo doParallel dplyr earth ENMeval foreach gbm ggplot2 lattice MASS maxnet mda nnet PresenceAbsence pROC purrr randomForest raster rasterVis reshape rlang rpart sp tidyr]; }; bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; }; - biorxivr = derive2 { name="biorxivr"; version="1.0.2"; sha256="10fwppflk2ri5qah1vp3q835g0299nkxz8x94xhfazbjikrxqan4"; depends=[RCurl XML]; }; bios2mds = derive2 { name="bios2mds"; version="1.2.3"; sha256="1k0r3fnkzfczx3wp3m8zpndk6gxca7idsp0z13rw84zjrgqaw6jm"; depends=[amap cluster e1071 rgl scales]; }; - bioseq = derive2 { name="bioseq"; version="0.1.2"; sha256="0njnf4dzan2bc3h69rpbpfqhj3w2msd41nkn9p2kvkik706sx50v"; depends=[ape crayon dplyr pillar readr rlang stringr tibble vctrs]; }; + bioseq = derive2 { name="bioseq"; version="0.1.3"; sha256="0dnps6b97fln0b9l44g4llnmkfdfif2i454w2wwnlpzahanvbl45"; depends=[ape crayon dplyr pillar readr rlang stringdist stringi stringr tibble vctrs]; }; bioset = derive2 { name="bioset"; version="0.2.3"; sha256="15vchim8cim42j1if0jars696rh50vmbggr9748q321f6ngm1w1i"; depends=[dplyr magrittr rlang tibble tidyr]; }; biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; biospear = derive2 { name="biospear"; version="1.0.2"; sha256="10y4hbncwiqpxzqvzjrmfgp804zczdgvwpjcj0dzaa0sx1njdzja"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; }; biostat3 = derive2 { name="biostat3"; version="0.1.5"; sha256="1hnq2al27033zagxjd0r8nls6z8lznfqqiyrharq07s6bgbl5bv9"; depends=[car MASS muhaz survival]; }; + biosurvey = derive2 { name="biosurvey"; version="0.1.1"; sha256="1hhch5qagn86pcn43qlmv0azfbjc9yv58yp9v1p5s6r5ffxkgs95"; depends=[diptest doParallel foreach ks maps picante raster rgdal rgeos sp spatstat_geom vegan]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; - biotools = derive2 { name="biotools"; version="4.1"; sha256="1xa5p8y8d524991qr0wjjc4fcl2mb32n5c465mkxfjfm7kbw28vh"; depends=[boot MASS]; }; + biotools = derive2 { name="biotools"; version="4.2"; sha256="1dyy9mk2afjbc8g1qygy6h1aksbhndm53c4sb5mfzriydl03ibxv"; depends=[boot MASS]; }; bipartite = derive2 { name="bipartite"; version="2.16"; sha256="10flnwgsll86w1dgn4rswbshag8l35hski0nf7xkvp5fj39sy4wp"; depends=[fields igraph MASS permute sna vegan]; }; bipartiteD3 = derive2 { name="bipartiteD3"; version="0.2.0"; sha256="1jvhlycmxii4vcm9qbj246qkwhd1bcggqq56b5rmbyqwd4vhqh8f"; depends=[downloader dplyr purrr r2d3 RColorBrewer stringr tibble tidyr]; }; biplotbootGUI = derive2 { name="biplotbootGUI"; version="1.2"; sha256="07lrs2n6s54h97vjriszszhksdbi14s2i234kwfhg7aq47k6l0jl"; depends=[cluster dendroextras MASS matlib rgl shapes tcltk2 tkrplot]; }; @@ -6234,58 +6469,57 @@ in with self; { bitmexr = derive2 { name="bitmexr"; version="0.3.1"; sha256="1h4fdh88b8j1p6hxabwf2v1wm8wnqzpl67hh15pjky2hhczfds05"; depends=[attempt curl digest dplyr httr jsonlite lubridate magrittr progress purrr rlang stringr]; }; bitops = derive2 { name="bitops"; version="1.0-7"; sha256="1i0phmq5yynla5x0frqll1gbf5ww59p3sgz1s06a354zqf9grdg9"; depends=[]; }; bitsqueezr = derive2 { name="bitsqueezr"; version="0.1.1"; sha256="0dy180r9cclq46mh0fzc68p5zm9x2z5pa8ajgsk7qycdkyw5v829"; depends=[]; }; - biva = derive2 { name="biva"; version="0.1.0"; sha256="1vppvk2n60hhi7p8y8rdyckmh4yk70wqyhbg7rbgh833s66whypw"; depends=[corrgram rpivotTable shiny shinyAce]; }; - bivariate = derive2 { name="bivariate"; version="0.7.0"; sha256="19yjd1c8fi15zcwsh04069drzbqwzmii59nvp2b8m6647sfms444"; depends=[barsurf KernSmooth mvtnorm]; }; + bittermelon = derive2 { name="bittermelon"; version="0.1.3"; sha256="09askrgm3fandkvrpzf5p9ysxs837ass0cmqi92dlv980m63zdip"; depends=[findpython png Unicode]; }; bivgeom = derive2 { name="bivgeom"; version="1.0"; sha256="1cn8k7q011whr4f7zig85dsrkz04614z9ns2ky6k6i16s5n3glxy"; depends=[bbmle copula]; }; bivquant = derive2 { name="bivquant"; version="0.1"; sha256="05dn4qik2dvmgqc2613vddh312bqhza1vnf94an75888gxri5h03"; depends=[copula cubature lpSolve MASS mvtnorm regpro]; }; bivrp = derive2 { name="bivrp"; version="1.2-2"; sha256="0b38nh38vgqjllb1z9627dm86yp0s06ky1g829g8kkz7rffdp2za"; depends=[MASS]; }; - biwavelet = derive2 { name="biwavelet"; version="0.20.19"; sha256="0pdjjjjiwnl7ihlwzjd9hwl5kzq5wbnbqfmm5pp8gvkcypj9k7rb"; depends=[fields foreach Rcpp]; }; + biwavelet = derive2 { name="biwavelet"; version="0.20.21"; sha256="0v7arwmng2i22svj836i57q8by9x5pghjv7d35g7r35wakrm8jyx"; depends=[fields foreach Rcpp]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; bizdays = derive2 { name="bizdays"; version="1.0.8"; sha256="1aiwnhgd2h7j36xj7165fc1fnvl8qn4y8c1lbdlsbanmvayydmr5"; depends=[jsonlite]; }; bjscrapeR = derive2 { name="bjscrapeR"; version="0.1.0"; sha256="18chbgiwify272iqf0w4vsqh73wbk12d8m2awc5hbnfqblz3phwd"; depends=[dplyr glue readr tibble]; }; bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; }; - bkmrhat = derive2 { name="bkmrhat"; version="1.0.2"; sha256="1mc4bjz0aczq2w4rxk59izrf6vnw92fjp9fsh00fgnliysv78sly"; depends=[bkmr coda future rstan]; }; + bkmrhat = derive2 { name="bkmrhat"; version="1.1.1"; sha256="0mak91p8vrvmqscghqgpzwcrxn7mm9km6wks1lrwixivlq0g1cdj"; depends=[bkmr coda data_table future rstan]; }; blackbox = derive2 { name="blackbox"; version="1.1.32"; sha256="180y19ls0vdk98smhs9hxpcwg3hwpl62d19zdiml38bjlxmr0kav"; depends=[foreach geometry lattice MASS nloptr numDeriv pbapply proxy rcdd Rcpp RcppEigen spaMM]; }; - blaise = derive2 { name="blaise"; version="1.3.4"; sha256="14jk62sw4xs0yip8gh1w2795l8p0ybv83c24ijizxymg16h7i9g7"; depends=[dplyr readr stringr tibble]; }; + blaise = derive2 { name="blaise"; version="1.3.8"; sha256="1jvjli349rzyiij80ggb27fsqp0hd1fz2pw93rj6cssgipl911xl"; depends=[dplyr readr stringr tibble]; }; blandr = derive2 { name="blandr"; version="0.5.1"; sha256="1rqas71hlf000b3z824d8ljshf8bx91bbrzaxxnx5n3chv19w6z6"; depends=[ggplot2 jmvcore knitr R6 rmarkdown stringr]; }; blapsr = derive2 { name="blapsr"; version="0.5.5"; sha256="1h6bdlawb3wzfw0l62k8b440yvvdh2liylhlnf3jfhdh1fivxq95"; depends=[coda MASS Matrix RSpectra sn survival]; }; blaster = derive2 { name="blaster"; version="1.0.3"; sha256="0ch03j5z1zlfs3jmp7p4pwhava89k9irixr1p3dx45090q05j3a1"; depends=[Rcpp]; }; blastula = derive2 { name="blastula"; version="0.3.2"; sha256="084mk6xb8ivqrp8anvisfk8rvwi7qfrp5kmy66vpihmjmqh7dkyc"; depends=[base64enc commonmark curl digest dplyr fs getPass here htmltools httr jsonlite magrittr mime rlang rmarkdown stringr uuid]; }; blatent = derive2 { name="blatent"; version="0.1.1"; sha256="1jnf3i7s3mn99ff8yzygxys0w8qf6vrfk16iqgxh7jbivbrczysk"; depends=[coda Matrix mnormt R6 Rcpp RcppArmadillo truncnorm]; }; - blavaan = derive2 { name="blavaan"; version="0.3-15"; sha256="0vxy7rbs75yn5yz0g72pxca8j5a5i12xap2y1kdmpdn39c1asgpp"; depends=[bayesplot BH coda future_apply lavaan loo Matrix MCMCpack mnormt nonnest2 Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; + blavaan = derive2 { name="blavaan"; version="0.3-17"; sha256="1rgi4wfwa6sh78vs7w1mpdfxi663840xg4kkqlgz28jscv64z8dd"; depends=[bayesplot BH coda future_apply lavaan loo Matrix MCMCpack mnormt nonnest2 Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; blin = derive2 { name="blin"; version="0.0.1"; sha256="1h94azm7gli9i4v3li5c1p36p3rkcj2p5j6rqzlzf0pcqs0bsc09"; depends=[abind glmnet MASS Matrix mvtnorm]; }; - blindrecalc = derive2 { name="blindrecalc"; version="0.1.2"; sha256="0nph82l58kgq2dqvga262zh394zp1had85qb8k8rwgaq68lad2vy"; depends=[Rcpp]; }; + blindrecalc = derive2 { name="blindrecalc"; version="0.1.3"; sha256="1kaia4mpwjh9p0m9jc694i2gy1hfqa3k04w17cnmwsfppgwq11ls"; depends=[Rcpp]; }; blink = derive2 { name="blink"; version="1.1.0"; sha256="053nw592sglzh6fgz7hj8ra6q7lqs83hhv14kcgs67b56q8a3crb"; depends=[plyr stringdist]; }; + bliss = derive2 { name="bliss"; version="1.0.2"; sha256="064w4q29ddcdwpj30y90v0dmpgpd3wjvka4xfn9f09mxl0dgnw41"; depends=[MASS Rcpp RcppArmadillo rockchalk]; }; blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; blme = derive2 { name="blme"; version="1.0-5"; sha256="0413j7gwr5yj14jamkizj55q7xii1a0kgazzj0ilqn2ascclz6k7"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.4"; sha256="1370djpy87816bfr0g8730x7q4d4xx9aa41iqm622q5b5zm2jzmp"; depends=[arm lme4 MASS]; }; - blob = derive2 { name="blob"; version="1.2.1"; sha256="1slb5mvxfyi92i8ifx2qa31hp57inilwhq1g9lzvgha6jrxbqm7g"; depends=[rlang vctrs]; }; - blockCV = derive2 { name="blockCV"; version="2.1.1"; sha256="0431d38zzkbpri65p5vnr8wc5b27124c4jaj845rgjlkvvb0xysm"; depends=[progress raster sf]; }; + blob = derive2 { name="blob"; version="1.2.2"; sha256="1yn7f13icaix0apxp4drnciwdn8bx8xmbd129jd7ck4rcly0axj9"; depends=[rlang vctrs]; }; + blockCV = derive2 { name="blockCV"; version="2.1.4"; sha256="1fikskjjq571rzmzmqf72z92qkvjb9wdx598kvd28y1ic0xzrgm6"; depends=[progress raster sf]; }; blockForest = derive2 { name="blockForest"; version="0.2.4"; sha256="14xggdm34hmdlz3hvvp5layk6mb016yppqf9x9rbia9lmmjbhgfh"; depends=[Matrix Rcpp RcppEigen survival]; }; blockRAR = derive2 { name="blockRAR"; version="1.0.2"; sha256="1d9izlcgz85kcz1sh11mcxq96qh0cwv6638jha851h2f4lnc8aa4"; depends=[arm dplyr ldbounds magrittr tibble]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; - blocklength = derive2 { name="blocklength"; version="0.1.3"; sha256="0443b30fisyjb3syfi7d7d3q3jxr3wig6rp6s0fbhpzlpjb60jh2"; depends=[tseries]; }; + blockcluster = derive2 { name="blockcluster"; version="4.5.1"; sha256="1f152m3fv0aaw2csgqvf1y231f5rjhwrkn69yyx9yb3ff65z49d8"; depends=[Rcpp rtkore]; }; + blocklength = derive2 { name="blocklength"; version="0.1.4"; sha256="13hsk15r2m2rnmdjs1apz6bhpm877pkc0rph2lvwgpm85ki0rr7z"; depends=[tseries]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; - blockmodeling = derive2 { name="blockmodeling"; version="1.0.0"; sha256="1z4w2kq0id0gb5d0lqcdaw3clplhzywarkpvvx3drivdypzl237i"; depends=[Matrix]; }; + blockmodeling = derive2 { name="blockmodeling"; version="1.0.5"; sha256="1vc8gy4slsywcwxq532373i0dq73fhs5cac9mr6zz2pjaaxjghhq"; depends=[Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.4"; sha256="1kx6ryx0ma7j70nzby0wdagqkf1cjdhvw32rf7i1pp8f2rkfsg84"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.5"; sha256="0bic3b8l7mp2hpwd8k1diwy6a4lj92i7s5k20i2wy8kw0c74jwfh"; depends=[]; }; blocksdesign = derive2 { name="blocksdesign"; version="4.9"; sha256="1kr3fxs8vgc96clhx5ml11jkwll1rg9gf16xg93q14jpg4hg0j9h"; depends=[plyr PolynomF]; }; - blogdown = derive2 { name="blogdown"; version="1.3"; sha256="11xjxa0jw93p0wbc41ckb0rkr2z8j5gcb6hz1gz5lq48vqfwsrrc"; depends=[bookdown htmltools httpuv knitr later rmarkdown servr xfun yaml]; }; + blogdown = derive2 { name="blogdown"; version="1.5"; sha256="08h4zsrw12xkllyx3czmpxjy1dnqr6vrk410zp7m75xzsbq5kg5q"; depends=[bookdown htmltools httpuv jsonlite knitr later rmarkdown servr xfun yaml]; }; blorr = derive2 { name="blorr"; version="0.3.0"; sha256="1ynvg6ar7c7p01225q9czy4gxks0p1vw3sx207l7vzqxw20wb1bn"; depends=[car data_table ggplot2 gridExtra lest Rcpp]; }; blrm = derive2 { name="blrm"; version="1.0-1"; sha256="0p0nmbxil4l89fcryrgsg9mxzb5fyg93p50aqkjy00ms05hwd0hx"; depends=[boot mvtnorm openxlsx reshape2 rjags]; }; - blsAPI = derive2 { name="blsAPI"; version="0.2.1"; sha256="0p45g4qqaialh5m9bxgrvnc7nqmm0429syw0bml8h4h8vy4014a7"; depends=[httr rjson]; }; - blscrapeR = derive2 { name="blscrapeR"; version="3.2.0"; sha256="0dq9yg9xik715b36vc3fch4ab3njqa22w7b7b905b9gyagkv2zbv"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; bltm = derive2 { name="bltm"; version="0.1.0"; sha256="1sx4ii65ddvdw45za8j320v1s9d1pz5k2gx979yymhyxi8fmq69z"; depends=[mvnfast Rfast]; }; bmabasket = derive2 { name="bmabasket"; version="0.1.1"; sha256="1hgbl1x38snhzbh5j1qz81azkdwzmm4idacyyyrn895vl71ypfrn"; depends=[partitions Rcpp RcppArmadillo]; }; bmass = derive2 { name="bmass"; version="1.0.3"; sha256="0dafixd996lamn5kfbqpiawblalhyw1gi394j46n2sij2r209d76"; depends=[]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; bmem = derive2 { name="bmem"; version="1.8"; sha256="1nhybz8aarzlqjx4443hsflflgy2jcprz5dv6mwxacnyspm93vlq"; depends=[Amelia lavaan MASS sem snowfall]; }; bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; - bmgarch = derive2 { name="bmgarch"; version="1.0.0"; sha256="1zivja09ci6kj5nymwhdzjjjqvkvbxcjk9v27kk7w25sqbyv9gvk"; depends=[BH forecast ggplot2 loo MASS Rcpp RcppEigen Rdpack rstan rstantools StanHeaders]; }; + bmgarch = derive2 { name="bmgarch"; version="1.0.1"; sha256="1jvfrzkjblzvm97wfwbwzz73sbhjkfkqg84rhgb2154vf2sdp139"; depends=[BH forecast ggplot2 loo MASS Rcpp RcppEigen Rdpack rstan rstantools StanHeaders]; }; bmggum = derive2 { name="bmggum"; version="0.1.0"; sha256="1r0j5gklmknyan68nc3vfn96ck414v75547486ic70v2pdr3xnpf"; depends=[BH edstan ggplot2 GGUM loo Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; - bmixture = derive2 { name="bmixture"; version="1.6"; sha256="12csg1nafhwhqrhg5rrzjsw06fbvgd8447a9ypbgs78ah81rmr8f"; depends=[BDgraph]; }; + bmixture = derive2 { name="bmixture"; version="1.7"; sha256="09ahs2dwrbqhk4aki9291v5lr5fa9mvi087zrqjmv2057ypyv2n5"; depends=[BDgraph]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; bmlm = derive2 { name="bmlm"; version="1.3.11"; sha256="1nlwfrs6kk2jxq8vxwfj388cdf2p8h81lskkb9bp80fp8fx722qh"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; }; @@ -6294,34 +6528,41 @@ in with self; { bmrm = derive2 { name="bmrm"; version="4.1"; sha256="1brdd5mhr5282wkdc62lgsqcxw077p69rknjk7fjcs282ahcik2s"; depends=[LowRankQP lpSolve matrixStats Rcpp]; }; bmscstan = derive2 { name="bmscstan"; version="1.1.0"; sha256="1mr56ry9jzsd2z0zffcysy01bh62cg13hi4swdhdvwmjcsb5gq97"; depends=[bayesplot coda ggplot2 LaplacesDemon logspline rstan]; }; bnclassify = derive2 { name="bnclassify"; version="0.4.5"; sha256="1ik3n0g6gw7504ryg5skwygyc545150r297gii4mr2zj252lf069"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; - bnlearn = derive2 { name="bnlearn"; version="4.6.1"; sha256="1bxf1p10g40nci92m1nkw9xska45hm29q1vp8wzfac1kmxjl8m74"; depends=[]; }; + bndovb = derive2 { name="bndovb"; version="1.1"; sha256="16mvkvwnx61jrvraagvxf56pvmf5klm8lnkqq4s5y2z92kd0clgp"; depends=[dplyr factormodel MASS nnet np pracma]; }; + bnlearn = derive2 { name="bnlearn"; version="4.7"; sha256="05r80arqvcmnkw20gffrfc2ypnqf6628c8y3xr8pxw3wkfxdf79f"; depends=[]; }; bnma = derive2 { name="bnma"; version="1.4.0"; sha256="0wfz5faxgbci0n6kmgcazn0vjnsvn9l7lj4f63a3c0x6pb0yiir0"; depends=[coda ggplot2 igraph rjags]; }; - bnmonitor = derive2 { name="bnmonitor"; version="0.1.0"; sha256="0fi6fkbvb2b9mpnsviib9mv7vymbds2kqb2s5805ycwxap233s31"; depends=[bnlearn DiagrammeR dplyr ggplot2 gRain gRbase gridExtra matrixcalc purrr RColorBrewer reshape2 rlang tidyr]; }; + bnmonitor = derive2 { name="bnmonitor"; version="0.1.1"; sha256="1728i8rsa8dg2svcmy7bs4qwja8p0h7c6hwysjp61g4vm87shzp8"; depends=[bnlearn dplyr ggplot2 gRain gRbase matrixcalc purrr qgraph RColorBrewer reshape2 rlang tidyr]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; bnpa = derive2 { name="bnpa"; version="0.3.0"; sha256="0qsxk47i7q4d8hbs2xj5k5sf8bqyzhq7rbj4y7w8ljprznlydgl9"; depends=[bnlearn fastDummies lavaan Rgraphviz semPlot xlsx]; }; bnpmr = derive2 { name="bnpmr"; version="1.2"; sha256="0vpqhs1h2mphn9w5yngb7lxvmzrhn7mkj7ca6hykhhg48s2ra98g"; depends=[]; }; - bnpsd = derive2 { name="bnpsd"; version="1.2.3"; sha256="1r2y1ch1ly4f6amdb5x8gywzv6pglrvzb7h20shx6x8k7qw03fgp"; depends=[]; }; + bnpsd = derive2 { name="bnpsd"; version="1.3.13"; sha256="0wnbsz5c52pglycykzkd5lsnxfkjqva0xhwnb4kz7x1zd8vbd1sl"; depends=[ape nnls]; }; bnspatial = derive2 { name="bnspatial"; version="1.1.1"; sha256="1drm9ia4lr80wahbbn9xrw658ppmgxm4iadwv77jz1x786dda2n1"; depends=[doParallel foreach gRain gRbase raster rgdal sf]; }; - bnstruct = derive2 { name="bnstruct"; version="1.0.9"; sha256="13nzka8i0znkyi9bkwlm8k5ksff1fc2i0aqbczxix23i1qzl8jz0"; depends=[bitops igraph Matrix]; }; + bnstruct = derive2 { name="bnstruct"; version="1.0.11"; sha256="0vlmaz75mnbj4js3h5j11rs7q7yx5agwi1y7hq16nb8x81arhwai"; depends=[bitops igraph]; }; bnviewer = derive2 { name="bnviewer"; version="0.1.6"; sha256="036jmypxg2ciiz388f90vm73l9djhpi6gzp1ibn9l0x3d072r7zz"; depends=[assertthat bnlearn caret e1071 igraph shiny visNetwork]; }; boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; }; bodenmiller = derive2 { name="bodenmiller"; version="0.1.1"; sha256="0rdbk3f95iw4352fl9d81ir503q072chbb4hn1k12sp1wjc3apid"; depends=[]; }; - boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; - bold = derive2 { name="bold"; version="1.1.0"; sha256="06qxkmfzgq7427js13bddxq9iydq0dpa13wyzrbycl6xg83sha0z"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; - bookdown = derive2 { name="bookdown"; version="0.22"; sha256="0j80wm36mw3f14ncfwm6xx09wff1kswfiv8b309x9y0f9r46dr0z"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; + boilerpipeR = derive2 { name="boilerpipeR"; version="1.3.2"; sha256="1dws84ghc5r6zpnr23qd4l9bkazds8ar723wkrkikjni58vshjf1"; depends=[rJava]; }; + bold = derive2 { name="bold"; version="1.2.0"; sha256="0r54ylxgmq9qnh1f36k4hafh80n86ibk4a994f8b1rnb9bq9f5cg"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; + bookdown = derive2 { name="bookdown"; version="0.24"; sha256="1qqvvfbpbd6sin8vpvr3zzlhlyx1i6b98yp77xj5zl220nid5slb"; depends=[htmltools jquerylib knitr rmarkdown tinytex xfun yaml]; }; bookdownplus = derive2 { name="bookdownplus"; version="1.5.8"; sha256="1cdxz5c69cgdk7wxr0xwhzw361rpg7j8xjv9hjf1877qqmhxbrkd"; depends=[bookdown knitr magick xaringan]; }; + boomer = derive2 { name="boomer"; version="0.1.0"; sha256="0nb58msk7ycim15ssjwig9i62x51ydnakq83jg6vcbqjg1a9anry"; depends=[crayon pryr rlang rstudioapi styler withr]; }; boostmtree = derive2 { name="boostmtree"; version="1.5.0"; sha256="18w5h8m6g4aszffyn0ixhzn2bgbrwrrcq2k54b70vbw00xqxmg1q"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-28"; sha256="0cjafhqv1c1mrjjcasqr767vs96wjcc6am9r1icryr8l4zymhwcz"; depends=[]; }; boot_heterogeneity = derive2 { name="boot.heterogeneity"; version="1.1.2"; sha256="0511vc6kbx3mijgknyzdc3jv2i1ay6wsc7660hd07xmvahqg8130"; depends=[HSAUR3 knitr metafor pbmcapply rmarkdown]; }; - bootComb = derive2 { name="bootComb"; version="1.0.1"; sha256="1y1kszf5hhacyvkrr9x9b0pjqs4rrzkwy9p30di0vwky5fn0zpp9"; depends=[]; }; - bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; + boot_pval = derive2 { name="boot.pval"; version="0.3"; sha256="0pmp1wd12gzkpl2ank7yw7gd160aa5n07dxdy812vki6kjp3qd19"; depends=[boot car lme4 Rdpack survival]; }; + bootComb = derive2 { name="bootComb"; version="1.0.2"; sha256="1vnkn1xa8qz58srgk1i5m3m3skghw5klvp0q53ab45a420j49spj"; depends=[]; }; + bootES = derive2 { name="bootES"; version="1.2.1"; sha256="16b14bycy3ds09hsxnk738k2xq9qmwcy3kzdqd6rw9w4j7167kf0"; depends=[boot]; }; + bootGOF = derive2 { name="bootGOF"; version="0.1.0"; sha256="11nn4lc9wdx1z35mfpc3zkk1xr0pvvjyvjzpjlq3z4gm0hmniifz"; depends=[checkmate R6]; }; bootImpute = derive2 { name="bootImpute"; version="1.2.0"; sha256="04i81dqxygl3hv55kn8nkrqzhqsxw2lpdmdfh8inf8rjcpql5bgw"; depends=[mice smcfcs]; }; bootLR = derive2 { name="bootLR"; version="1.0.2"; sha256="1aj5l42d5y7czxzlg6r9ykdxyjf8m8bahl41xk4k6xpxckdnka14"; depends=[binom boot]; }; + bootPLS = derive2 { name="bootPLS"; version="0.9.9"; sha256="1i0bzykwjimyswb0z23sqbhm98b9lxifnkby682khva7yfk7k8qr"; depends=[bipartite boot doParallel foreach mvtnorm pls plsRglm spls]; }; bootSVD = derive2 { name="bootSVD"; version="1.1"; sha256="16d3qv8vzhfvl9vbfglkb3csmc4npb29jcq9apv89hj7bkcapvi9"; depends=[ff]; }; bootStepAIC = derive2 { name="bootStepAIC"; version="1.2-0"; sha256="0p6v4zjsaj1p6c678010fazdh40lpv0rvhczd1halj8aic98avdx"; depends=[MASS]; }; bootUR = derive2 { name="bootUR"; version="0.2.0"; sha256="01hlglks2lwp49g481hyrz645grf0zhpl508vbhbsvk1z2888cs5"; depends=[Rcpp RcppArmadillo RcppProgress]; }; + bootcluster = derive2 { name="bootcluster"; version="0.2.5"; sha256="0jhq0f8a3lajhqksvxd3k703b50vzll43q9w4iaqv4ylsg9l6pyr"; depends=[cluster doParallel dplyr flexclust foreach fpc GGally ggplot2 gridExtra igraph intergraph mclust network plyr sna]; }; + bootf2 = derive2 { name="bootf2"; version="0.4.1"; sha256="17wrl678x9mb5pny2vwrr6sdl2hsqr1nbjzsizp2q6l3w5m6s152"; depends=[ggplot2 MASS minpack_lm readxl]; }; bootnet = derive2 { name="bootnet"; version="1.4.3"; sha256="0zmv6wibqkdhffs937xa1xjz6xn6wb4hajpdl36sfkmw3cqfc9sm"; depends=[abind BDgraph corpcor dplyr ggplot2 glasso graphicalVAR gtools huge igraph IsingFit IsingSampler lavaan Matrix mgm mvtnorm NetworkToolbox networktools pbapply psychTools qgraph relaimpo tidyr]; }; bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; bootsPLS = derive2 { name="bootsPLS"; version="1.1.2"; sha256="19ikz3l0qds25hgcxvhsvqy6jyshcdvnxw6774ifl9ylngxvlfh0"; depends=[mixOmics]; }; @@ -6336,11 +6577,11 @@ in with self; { boundingbox = derive2 { name="boundingbox"; version="1.0.1"; sha256="0kgpsvnq8f0qyw55rldwqapys36y6lb4w2bw2azfl4nmrrnayxbc"; depends=[gplots imager]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; boutliers = derive2 { name="boutliers"; version="1.1-1"; sha256="01dp1w5lxmn6nixajg6dz0qincm0i1in03q7g284v37qnszyimqs"; depends=[metafor]; }; - box = derive2 { name="box"; version="1.0.2"; sha256="1paviqdbn39cy03b99lga0krnrdmm3z1s1s1jf8kqxnxsvixmgg1"; depends=[]; }; + box = derive2 { name="box"; version="1.1.0"; sha256="13jdghfagpwr0x0yc7zg9hdysb2bzlcpc3fws4inj76v9285hdz5"; depends=[]; }; boxcoxmix = derive2 { name="boxcoxmix"; version="0.28"; sha256="12f1lakfy9i1rq70cq0bffpdachsm58rcmbbhgnq1r31g028zrcc"; depends=[npmlreg qicharts statmod]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.3.0"; sha256="1y1b45q69sxbszd83s8ch10z4i55h34ixm8q7yxr7byx3px8y65n"; depends=[]; }; boxr = derive2 { name="boxr"; version="0.3.6"; sha256="1hdm4p7zx2r566zaiyw06qg3c790gsvylrvav7g9fl4i1x6qgkyk"; depends=[assertthat bit64 digest dplyr fs glue httpuv httr jsonlite lifecycle magrittr mime purrr rio rlang stringr tibble]; }; - bp = derive2 { name="bp"; version="1.0.1"; sha256="0x6lcg08rvs7n74v8k920yx0ii4k64qj4ijljjyd0k3rwmi0kcqz"; depends=[cowplot dplyr ggplot2 gridExtra gtable lubridate magrittr tibble tidyselect]; }; + bp = derive2 { name="bp"; version="2.0.0"; sha256="0rjlpwd7xmmckys806r81sgnld2c0mnjw9yvnfhgsa09fs1xfwcq"; depends=[cowplot dplyr ggplot2 gridExtra gtable lubridate magrittr tibble tidyr tidyselect]; }; bpDir = derive2 { name="bpDir"; version="0.1.2"; sha256="1wkj25srsbidpcvgm6c74584ahybjy39r86dxir1vd13kbi8l120"; depends=[circular MASS plotrix]; }; bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; bpbounds = derive2 { name="bpbounds"; version="0.1.4"; sha256="05knl0lmhbc399zwb35r8m1w5jvmwad8rg5m7m633pg7cfijayb9"; depends=[]; }; @@ -6348,12 +6589,13 @@ in with self; { bpcp = derive2 { name="bpcp"; version="1.4"; sha256="0jwz9vrz6ivz70qzgvpvksk94rw5m7vi6yijbg8dj6biq5rq01lv"; depends=[ggplot2 survival]; }; bpcs = derive2 { name="bpcs"; version="1.0.0"; sha256="0jsy2l1qnzr8098614d6pj7rydf6b9s7kxrkahyzq82ivby9hj5m"; depends=[badger BH coda dplyr ggplot2 gtools HDInterval knitr loo magrittr Rcpp RcppEigen RcppParallel rlang rstan rstantools shinystan StanHeaders stringr tibble tidyr tidyselect]; }; bpgmm = derive2 { name="bpgmm"; version="1.0.7"; sha256="0abh6jjglims8hjm2fwh0dz2qsgxy0fglxl5fnfgkwc139rsrhgy"; depends=[fabMix gtools label_switching MASS mclust mcmcse mvtnorm pgmm Rcpp RcppArmadillo]; }; - bpnreg = derive2 { name="bpnreg"; version="2.0.1"; sha256="133wxh5ai9mhds9jp1a6f13cq5132myj148rzg0wnh86xwhh38i9"; depends=[BH haven Rcpp RcppArmadillo]; }; - bpp = derive2 { name="bpp"; version="1.0.1"; sha256="0yvkw6hrgjln6q1kn4w271dwwb0vw78pf0gsqq2rdy4nxkxr9hxs"; depends=[mvtnorm]; }; - bqror = derive2 { name="bqror"; version="0.1.4"; sha256="1vk6rahrlvi13bjx7bbvs9lj0a2jykdail41ajr6p2s9agmmw69x"; depends=[GIGrvg invgamma MASS NPflow pracma truncnorm]; }; - bqtl = derive2 { name="bqtl"; version="1.0-32"; sha256="0jjqgsm9fmvz5nkgz608xfljjpmaf4rs4f7kxvpqn4b1l9s5lhci"; depends=[]; }; - bracer = derive2 { name="bracer"; version="1.1.1"; sha256="1l722jg88i4898v8fwb9klwl9mbpaz1phypbpqc1j2kp2n2vq0vb"; depends=[stringr]; }; - braggR = derive2 { name="braggR"; version="0.1.0"; sha256="0nw6qygmzvfq64a2k2m88wycfvk6414gjy1nx3hg2i1pg7ccv5ch"; depends=[Rcpp]; }; + bpnreg = derive2 { name="bpnreg"; version="2.0.2"; sha256="1acf7smlcg8b29ga47wpb23zpfb90iz19fjc5v0zppc8q20lgggl"; depends=[BH haven Rcpp RcppArmadillo]; }; + bpp = derive2 { name="bpp"; version="1.0.2"; sha256="0an4lmml0jhx4lbbwiaa63jnqv8fx0nhb04vpsqgv8d0g9phqx3a"; depends=[mvtnorm]; }; + bpr = derive2 { name="bpr"; version="1.0.4"; sha256="1pi5p0av40lhyc5vskrkkclx30amzry484g91s63cmffbfn08jsc"; depends=[BH coda MASS Rcpp RcppArmadillo]; }; + bqror = derive2 { name="bqror"; version="1.1.0"; sha256="12s287i2bhv93ll3gz5rsln89shcm5blq5dzvp7n4qfps4frcc41"; depends=[GIGrvg invgamma MASS NPflow pracma truncnorm]; }; + bqtl = derive2 { name="bqtl"; version="1.0-33"; sha256="1sbzpi9z94f010lw2y1gmifjrvpmiqs4m26za7vr1xz72azrqvs9"; depends=[]; }; + bracer = derive2 { name="bracer"; version="1.2.1"; sha256="0q47p43957nlaqsz0hhbica2hlar95c2i8avgq024yhccik5nx6f"; depends=[stringr]; }; + braggR = derive2 { name="braggR"; version="0.1.1"; sha256="1sq7knrnz3nqprlvsj24f9gj1i0viawq3wcv2b97dmbwa7rd5qfz"; depends=[Rcpp]; }; braidReports = derive2 { name="braidReports"; version="0.5.4"; sha256="1455pswcbz3zscvk6rgvgrjcp154l5lfx5m7s24m91rpjmc2y7pk"; depends=[braidrm ggplot2]; }; braidrm = derive2 { name="braidrm"; version="0.71"; sha256="1cn0rdlw775pmzbjmhny7gkm901a3qgz7infqb5s9az606xg54d3"; depends=[]; }; brainGraph = derive2 { name="brainGraph"; version="3.0.0"; sha256="0sr2rf5fs02m3c304wbya2rszxcivc3cypg978hwzzcf30r4fy7y"; depends=[abind data_table doParallel foreach igraph lattice MASS Matrix permute]; }; @@ -6361,20 +6603,21 @@ in with self; { brainR = derive2 { name="brainR"; version="1.6.0"; sha256="1l5rm6grslc6mivwh2fv3pznhy2cw16fz5695pmyfamzvsjggir1"; depends=[misc3d oro_nifti rgl]; }; brandwatchR = derive2 { name="brandwatchR"; version="0.3.0"; sha256="10bccsaswsq06wdrxqg71amzx5rabmgfi4n074y651r2c1pyy98w"; depends=[data_table httr jsonlite]; }; brant = derive2 { name="brant"; version="0.3-0"; sha256="0rcp0am4wjlkinvmv0n5bky84v31ds28v163p5mlp343cgma2b62"; depends=[MASS Matrix]; }; - bravo = derive2 { name="bravo"; version="1.0.3"; sha256="1q5xgxyjss12jpd0arlqk4va3arzvla597vg2v6f9jbqm07ffy7h"; depends=[Matrix Rcpp]; }; + bravo = derive2 { name="bravo"; version="2.0.1"; sha256="1q7xd30hdmrdzfbjpz8vdj8g6rgqaixcjfabs7afp3kccgv4k6bf"; depends=[Matrix Rcpp]; }; brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; breakDown = derive2 { name="breakDown"; version="0.2.1"; sha256="1jm9zmyfcnr9mjz7b30k34h47msvik9ngfysi6dc48gvrk41yk9q"; depends=[ggplot2]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; - breakfast = derive2 { name="breakfast"; version="2.1"; sha256="11i7lqzzkp7ipvi49cv448jz39mlchrpkw2cslhzzj2ha2j785nm"; depends=[plyr Rcpp]; }; + breakfast = derive2 { name="breakfast"; version="2.2"; sha256="1bdzi0czhjwiqid6xz1b10p9wqy051sy5jhxnwzh9bxzh94a79lk"; depends=[ggplot2 plyr Rcpp]; }; breakpoint = derive2 { name="breakpoint"; version="1.2"; sha256="004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9"; depends=[doParallel foreach ggplot2 MASS msm]; }; breathtestcore = derive2 { name="breathtestcore"; version="0.8.1"; sha256="1cdv3qc5bydpchw2qz8wgqsc1hjn0q97bsk05gm8s0xfxmkfn3jb"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; breathteststan = derive2 { name="breathteststan"; version="0.8.0"; sha256="1h05yqpsa1r6p0iybwh7rap0n10vr2wj2driq7qyq6wk6y14m8hc"; depends=[BH dplyr purrr Rcpp RcppEigen rstan rstantools StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brglm = derive2 { name="brglm"; version="0.7.2"; sha256="08shcz0j1npdn7xkhsvlzs3z4rdwq3g4rk6a4xx8wirqw8n8s2an"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.7.1"; sha256="0h510yfy4ai15iq1l6l3cwbvh69gijlfv1ac9mqbyhbnq37rgwb1"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; + brglm2 = derive2 { name="brglm2"; version="0.8.0"; sha256="0gvvnz9barbj1zix07ngj5mwm2739nv9cman46mn6ck9jhm9dpww"; depends=[enrichwith lpSolveAPI MASS Matrix nnet numDeriv]; }; briKmeans = derive2 { name="briKmeans"; version="0.1"; sha256="026wga5lqr8i6zxi8jnw466d40r9qf1blb7l331h9vaj2j169iax"; depends=[boot cluster depthTools]; }; brickr = derive2 { name="brickr"; version="0.3.5"; sha256="1a6yxhq2zly3i3gs4dd19xhyrin1qaxdr7x3a887j7zbcj0j4z9q"; depends=[colorspace dplyr farver ggplot2 magrittr purrr rgl scales tidyr]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; + bridger = derive2 { name="bridger"; version="0.1.0"; sha256="1rx16zwa3zz4bs7h0b75vsx78dvkif8d9c7prb5pmwccizll7v53"; depends=[cowplot dplyr ggedit ggplot2 glue gridExtra kableExtra magrittr patchwork pdftools scales stringr tibble tidyr]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; bridgesampling = derive2 { name="bridgesampling"; version="1.1-2"; sha256="0sry1xwiv4y52k44hq6z8y2kysp5kxgl4dix3m94svg3ladd7v2l"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; brinton = derive2 { name="brinton"; version="0.2.5"; sha256="0jiw14glfhh13dkwn2x36q92gfhadna0fq4vs0f83nq8sqnx4s4m"; depends=[forcats GGally ggplot2 glue gridExtra lubridate pander RColorBrewer rmarkdown sm tibble]; }; @@ -6383,50 +6626,53 @@ in with self; { briskaR = derive2 { name="briskaR"; version="1.0.2"; sha256="1m5ck90wc90wr5gbgzl3b9inxxng1sbaz5kdvy9s3jnyxspz97jn"; depends=[deldir deSolve fasterize fftwtools MASS mvtnorm raster Rcpp RcppArmadillo rgdal rgeos sf sp testthat]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.7"; sha256="0s47qz8y416x0gz91pzdpr97pmlvddwkvll454vnlafxxk9p5lds"; depends=[boot brglm MASS profileModel Rcpp]; }; brm = derive2 { name="brm"; version="1.1.1"; sha256="0kyr8mxz5g3w41kp08d47f29cff8fqrfbm1ri7hgfg2lgr1151xy"; depends=[]; }; - brms = derive2 { name="brms"; version="2.15.0"; sha256="0byc3fyvf9qbvvgwf55ih5d4br1nnxlbaidq9fvr11bmv38h25y1"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme projpred Rcpp rstan rstantools shinystan]; }; - brnn = derive2 { name="brnn"; version="0.8"; sha256="119lxm691ci2bf62jwmbhqsl39xy3jvsi988rr6sdslwaxqyx35b"; depends=[Formula truncnorm]; }; + brms = derive2 { name="brms"; version="2.16.1"; sha256="1i0vkkfziac29vncw4igja5m7a6rhw9rqwifrw3y47q6zgczp7kl"; depends=[abind backports bayesplot bridgesampling coda future ggplot2 glue loo Matrix matrixStats mgcv nleqslv nlme posterior projpred Rcpp rstan rstantools shinystan]; }; + brnn = derive2 { name="brnn"; version="0.9"; sha256="0gyjvrakwd6nbgv94hbxvynsl52w0zswzp8fxl88rppycpgn81j6"; depends=[Formula truncnorm]; }; brokenstick = derive2 { name="brokenstick"; version="1.1.0"; sha256="02n8fv84cfj32mg08ylpg19alf69kkpknpvd6mx86lclhaqa3cnf"; depends=[dplyr lme4 matrixsampling rlang tidyr]; }; + brolgar = derive2 { name="brolgar"; version="0.1.2"; sha256="0xhv76z75zsrvcy606cv8qvz14w5g02gcs2744kv1kflaaics7dx"; depends=[dplyr fabletools ggplot2 glue magrittr purrr rlang tibble tidyr tsibble vctrs]; }; broman = derive2 { name="broman"; version="0.72-4"; sha256="06jywrhsjnwacr3n5wzyr1w4c2z23s3hvspj93gjvwn0rnma3sk3"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.7.6"; sha256="1ljcl8mh0yqxw3qxzar482qwbxbcaim1x6y1wm82ws12pfdw0j8n"; depends=[backports dplyr ellipsis generics glue purrr rlang stringr tibble tidyr]; }; + broom = derive2 { name="broom"; version="0.7.9"; sha256="1z65qyhkhkyalxhrvpsa7n8pickj9fjs8r4gzdvjp2rpggwramhx"; depends=[backports dplyr ellipsis generics glue purrr rlang stringr tibble tidyr]; }; broom_helpers = derive2 { name="broom.helpers"; version="1.3.0"; sha256="1c5pzvnvrxrnw3ccfb4b8fdyrw5mf0q0i6isxh9nbm9wgbrk29g0"; depends=[broom cli dplyr labelled lifecycle purrr rlang stringr tibble tidyr]; }; - broom_mixed = derive2 { name="broom.mixed"; version="0.2.6"; sha256="1858dninq16s8p00hapn9vb3i1r5alia50bi89a37zcnap31ibai"; depends=[broom coda cubelyr dplyr nlme plyr purrr reshape2 stringr tibble tidyr TMB]; }; - broomExtra = derive2 { name="broomExtra"; version="4.2.1"; sha256="0i4wbh79663n7x97il04vnbmidpy5zga1197s98ja68wcryqmsxl"; depends=[broom broom_mixed dplyr magrittr parameters performance rlang tibble]; }; + broom_mixed = derive2 { name="broom.mixed"; version="0.2.7"; sha256="1fh1vxi8n5y30mayk4aa1yis4c064fz5xyrg8m0rl8xgaxakhagz"; depends=[broom coda dplyr nlme purrr stringr tibble tidyr]; }; + broomExtra = derive2 { name="broomExtra"; version="4.2.3"; sha256="187qnfs6lz0ff9xr7zxfj2laac35jvq105c6cr9fjl82vw2i8np1"; depends=[broom broom_mixed dplyr magrittr parameters performance rlang tibble]; }; brotli = derive2 { name="brotli"; version="1.2"; sha256="07rgdgxh9bvn0qavpclxmkglwyl6ndqasxcs6j12if698dkn976b"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; - brranching = derive2 { name="brranching"; version="0.6.0"; sha256="032n5yp75bkzwb24zbad25f2059hqgdkv6mxsbb49pda34rm6y76"; depends=[ape conditionz crul curl phylocomr phytools taxize]; }; - bruceR = derive2 { name="bruceR"; version="0.6.2"; sha256="0nrisl85ldvvg3m9pkvqi201lrh80ipxm5wmdh39j4zzivdwqibx"; depends=[cowplot crayon ggplot2 ggtext glue interactions jmv mediation MuMIn pacman performance see texreg]; }; + brranching = derive2 { name="brranching"; version="0.7.0"; sha256="06jy3qhbr0v4m1j4j8a7fb7ic59sx4zhlsm1yb3g6rdwc00d67wj"; depends=[ape conditionz crul curl phylocomr phytools taxize]; }; + bruceR = derive2 { name="bruceR"; version="0.7.2"; sha256="0ynsimhqyq3anbmysw6269vnil9175gskx6qyyc1vcd0km4b75i9"; depends=[cowplot crayon ggplot2 ggtext glue jmv pacman performance see]; }; brunnermunzel = derive2 { name="brunnermunzel"; version="1.4.1"; sha256="1lba5cpiray65zg1pv3xv6yl1xg78rqlwxkcmhgizlh1rhpd430p"; depends=[]; }; brxx = derive2 { name="brxx"; version="0.1.2"; sha256="08qlfnf84k3yjcvr1wm6gd96mk26xf2gz59ychb3m981228hbbs6"; depends=[blavaan blme GPArotation MASS MCMCpack rstan TeachingDemos]; }; - bs4Dash = derive2 { name="bs4Dash"; version="0.5.0"; sha256="1y75i6bsdy1bsbzwjblsnimw1zzk0zl3qnzqfq9zcnf6q2ghi3r2"; depends=[htmltools shiny]; }; + bs4Dash = derive2 { name="bs4Dash"; version="2.0.3"; sha256="17vpng0s0sr3bnaqq3d545s72zd5a7isdbvzh01148lzq0va710g"; depends=[bslib fresh htmltools httpuv httr jsonlite lifecycle shiny waiter]; }; + bs4cards = derive2 { name="bs4cards"; version="0.1.0"; sha256="1462cj7jm54qmsv6f9zg3ikm6bxrrzv60gdvmwm9k9zpcjxdkjsx"; depends=[htmltools magrittr rlang]; }; bsTools = derive2 { name="bsTools"; version="0.1.0"; sha256="08h029gznsw93xirsxc1ib61qpqw1k8qzc0cjha56yr4j8b8qagy"; depends=[html5]; }; bsam = derive2 { name="bsam"; version="1.1.3"; sha256="1yiplh4wcc711w59ir5hxlp3mmgsnfz01d6203vfgclzsi7ix5m9"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; bsamGP = derive2 { name="bsamGP"; version="1.2.3"; sha256="1wqs2y9f7fgdvshhzwpjp811h4xhdd1lplpadnpffa2lmyv7vh5s"; depends=[ggplot2 gridExtra MASS]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bsem = derive2 { name="bsem"; version="1.0.0"; sha256="1h4wsib6ppqj8nbvj4pzkm04bzrdkg9l7xfmzzmld9cswai4iw52"; depends=[BH coda DiagrammeR lattice magrittr Rcpp RcppEigen rstan rstantools shiny StanHeaders viridis visNetwork]; }; bshazard = derive2 { name="bshazard"; version="1.1"; sha256="1kidypyqlilf794mksjvhja8bmnd9hdhz91ywy0mcddgc6wbar4h"; depends=[Epi survival]; }; - bslib = derive2 { name="bslib"; version="0.2.4"; sha256="0qlpv2lqr3hjykszmnll7vi4zhmrz4rgcfl0sifxc6cha6jy2nac"; depends=[digest htmltools jquerylib jsonlite magrittr rlang sass]; }; + bslib = derive2 { name="bslib"; version="0.3.0"; sha256="0zfjavz5jw4lfbrmc3rgsivcrxq2ia9jwmfbcrdxnxlmyri8qinr"; depends=[htmltools jquerylib jsonlite rlang sass]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; bsplinePsd = derive2 { name="bsplinePsd"; version="0.6.0"; sha256="0f785l02hiq3f7anxqhm09f7lrqgkkqhly7f1x78cxm22hvrqyhg"; depends=[Rcpp]; }; bsplus = derive2 { name="bsplus"; version="0.1.2"; sha256="19vz8f9ln7kf3myx30lpcz8viv51bbl7n6nppys0zrzb6372cpn1"; depends=[glue htmltools jsonlite lubridate magrittr purrr rmarkdown stringr]; }; - bspm = derive2 { name="bspm"; version="0.3.7"; sha256="0fll8kiqn7bcmf1cm4p9i4sny2b6ijk7ls77v5w0cvr8zsbfm8ly"; depends=[]; }; + bspm = derive2 { name="bspm"; version="0.3.8"; sha256="0ds841271jnslb5h1681kzp04h3jj6nya94xx1kr7abbc0sg23d4"; depends=[]; }; bspmma = derive2 { name="bspmma"; version="0.1-2"; sha256="1a3p1h7bks5yrxv791wfa680v4a6q10p59iz6wvfifhf3ndlaw49"; depends=[]; }; - bssm = derive2 { name="bssm"; version="1.1.4"; sha256="0b7my0w6ri53m9cibfwr8rwnawnmkppbw41755ar1ingx7zxqalp"; depends=[coda diagis ramcmc Rcpp RcppArmadillo sitmo]; }; + bssm = derive2 { name="bssm"; version="1.1.7-1"; sha256="0vwhnpzvnx16a51sssnakydxv6jim3a16apfjd87ismwdycvkvlz"; depends=[checkmate coda diagis ramcmc Rcpp RcppArmadillo sitmo]; }; bssn = derive2 { name="bssn"; version="1.0"; sha256="1brxbvcvqy8n9xpvp5kz47x5ps8hdqgnh6s49051qaylp95qm432"; depends=[ClusterR mvtnorm sn ssmn]; }; bst = derive2 { name="bst"; version="0.3-23"; sha256="1wx039cl8s1j1dwjg50ivn39fckkf8mzgrm953bg02w0p0fpz5bh"; depends=[doParallel foreach gbm rpart]; }; - bsts = derive2 { name="bsts"; version="0.9.6"; sha256="0b2xa5g4hydwn0chwn91d4mng4gq90fdaynh794ri4zbqpshs3xg"; depends=[Boom BoomSpikeSlab xts zoo]; }; - bsub = derive2 { name="bsub"; version="1.0.2"; sha256="08ahmhg8fcrb5v14g3ij1qi3vpc92r9w02q9h64a7a1m64fib4lw"; depends=[clisymbols crayon digest GetoptLong GlobalOptions]; }; + bsts = derive2 { name="bsts"; version="0.9.7"; sha256="00iz1rwi7z02hipmmifzzgflf16b1va3pybxgi8xk3rdwxxvjpal"; depends=[Boom BoomSpikeSlab xts zoo]; }; + bsub = derive2 { name="bsub"; version="1.1.0"; sha256="112hlvg15jlzg3drfzkslaly42vnvsycn9vif0w3iaw5fzsaa954"; depends=[clisymbols crayon digest GetoptLong GlobalOptions]; }; btb = derive2 { name="btb"; version="0.1.30.3"; sha256="00asbzjgcjd1cm5m1yndbgr60zpvnhbk5b7rhkhc2z1w513bwi8w"; depends=[BH Rcpp RcppArmadillo RcppParallel sf sp]; }; - btergm = derive2 { name="btergm"; version="1.9.13"; sha256="1md5mxr5in9ag2ydgrkk9kk27zxjx5a9hfxm0mxp3xxcks9h7xk2"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet_common xergm_common]; }; + btergm = derive2 { name="btergm"; version="1.10.3"; sha256="0y92zgcqzvq8vvv6rwmqja83jjm3q4ilg6ivyzaqsz1wgcvnbwmv"; depends=[boot coda ergm igraph Matrix network ROCR sna speedglm statnet_common]; }; bubblyr = derive2 { name="bubblyr"; version="0.1.2"; sha256="04agfwk6rmbhlfblfw1irqnv3yrp00zfn4qwy2169b7ypg8r55v2"; depends=[glue htmltools]; }; bucky = derive2 { name="bucky"; version="1.0.6"; sha256="01rlx0m6h66y1p9k5llg17qpajjhk2vmhbpwc4i5igf5x5g4clgc"; depends=[lmtest sandwich]; }; - buffeRs = derive2 { name="buffeRs"; version="0.21"; sha256="0rrjjnqjv1xdc5s7s0l08mir5r69zzcl81cg5sbfq6waskr6z6nj"; depends=[sf]; }; - buildmer = derive2 { name="buildmer"; version="1.9"; sha256="12nl73m0bc02lcyglxxrgi67nrylrxbn6946h3mbvr57jygpp39l"; depends=[lme4 mgcv nlme plyr]; }; + buffeRs = derive2 { name="buffeRs"; version="0.31"; sha256="1yr2bg2cyl8sm4g7jrjw9apj5lqhbqscw5mshs8r8niz0fkyq6lg"; depends=[sf]; }; + buildmer = derive2 { name="buildmer"; version="2.1"; sha256="0sw8cgkx164qswsl59g4z81kgcxrajn0vzrwa8p4mbcv8q60qvip"; depends=[lme4 mgcv nlme plyr]; }; buildr = derive2 { name="buildr"; version="0.1.0"; sha256="125s41d2ahww7ngli2mgl5999syjm5q5mxskv6jjrnfv7l6vhm3k"; depends=[glue magrittr readr rstudioapi stringr tibble usethis]; }; bujar = derive2 { name="bujar"; version="0.2-9"; sha256="1hx9yrry1v3vl14y1wpfp1l3cymyqhnff86sv6b112b9cfjpwmvq"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms survival]; }; bulletcp = derive2 { name="bulletcp"; version="1.0.0"; sha256="1k7lw8gflih47ncz8hgsj0sxbajnkhz1k7yb7rwbdnzcki3n3jln"; depends=[assertthat dplyr mvtnorm Rdpack]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; }; - bumbl = derive2 { name="bumbl"; version="1.0.0"; sha256="0s8kxcrii6pvqxannhhcni5k2hashs6gz0h859ic06xhmlfp92zz"; depends=[broom dplyr ggplot2 glue MASS purrr rlang tidyr]; }; + bumbl = derive2 { name="bumbl"; version="1.0.1"; sha256="0dvn518x6fyccchm9bx21z9yifzqb8iqajzj494h7p8ijc6j5ml2"; depends=[broom dplyr ggplot2 glue MASS purrr rlang tidyr]; }; + bumblebee = derive2 { name="bumblebee"; version="0.1.0"; sha256="055plkcswq7qsy3flkjjq5kqampj9s8dbc3ahzinps6s0jkcv2ad"; depends=[dplyr gtools Hmisc magrittr rmarkdown]; }; bunching = derive2 { name="bunching"; version="0.8.4"; sha256="0hb50xxlpia3149kyp0df4dmfkxvblnj7hd24c7ylglxzx2hq59j"; depends=[BB dplyr ggplot2 tidyr]; }; bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; bundesbank = derive2 { name="bundesbank"; version="0.1-9"; sha256="05sc6m2v8bfgdka7v28rxhq5a8c88gsxkv0zjk08rpw8k8zql0dk"; depends=[]; }; @@ -6435,12 +6681,12 @@ in with self; { burnr = derive2 { name="burnr"; version="0.6.0"; sha256="1xpdd6nni3zca2mabrq1bkgiqlk67v6mn6ykfrx95h8afzjr4k1p"; depends=[forcats ggplot2 MASS plyr reshape2 rlang stringr tidyr]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; busdater = derive2 { name="busdater"; version="0.2.0"; sha256="0hib73zay9r7rv49zv1lx0l15jzjyli9f1vrk414l8apggvx4c6s"; depends=[lubridate]; }; - butcher = derive2 { name="butcher"; version="0.1.4"; sha256="17zf76ymv999wvrsrx40z4g8nnpax92mf5mbxpgy62b84swsxc30"; depends=[fs lobstr purrr rlang tibble usethis]; }; + butcher = derive2 { name="butcher"; version="0.1.5"; sha256="1yzp4zz2r9xwv2cxywwx2xmh9asnw0lyj15fix4h1ypadbxz68pd"; depends=[fs lobstr purrr rlang tibble usethis]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; bvartools = derive2 { name="bvartools"; version="0.2.0"; sha256="0s5i902f35zkdm12zl3dmf896hv1bll0rnxl58679bam9q50dqk5"; depends=[coda Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; bvls = derive2 { name="bvls"; version="1.4"; sha256="18aaf7kk5mks3a59wwqhm1ckpn6s704l9m5nzy0x5iw0s98ijbm2"; depends=[]; }; - bvpSolve = derive2 { name="bvpSolve"; version="1.4.1"; sha256="0pxpnf19g085c1a4nb2j48nr611fg1sdl7jlv79nmy4b985yqvrw"; depends=[deSolve rootSolve]; }; + bvpSolve = derive2 { name="bvpSolve"; version="1.4.2"; sha256="1rdmxlkc4azsa1ci9pf9v1ls70mjkd3byy28nrz905yw3zpzmlqm"; depends=[deSolve rootSolve]; }; bwd = derive2 { name="bwd"; version="0.1.0"; sha256="1ryd5cqbpns9dsis2a9vjg6fcg23284c3dr3j3l18krdshdksfr0"; depends=[]; }; bwimage = derive2 { name="bwimage"; version="1.3"; sha256="1r5l7z90q2qs92dzp78jj4gf1kg1gc85g6y5rn2z8vxjbvbc5vma"; depends=[jpeg png]; }; bwsTools = derive2 { name="bwsTools"; version="1.2.0"; sha256="181pm9pr0ykyd3mikn6z4z5m7jkv72sisixmilijh6q3393g9pqw"; depends=[crossdes dplyr igraph magrittr rlang tidyr]; }; @@ -6450,17 +6696,19 @@ in with self; { c060 = derive2 { name="c060"; version="0.2-7"; sha256="1jkwi95033qn609rx7m466zv33r7dy1959ja01gd89mwyxamyid3"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; c212 = derive2 { name="c212"; version="0.98"; sha256="0pzg239602iq56nhxfdvlk26z58lz6vvlbwsdpwhmich0by4gx4x"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; + c2d4u_tools = derive2 { name="c2d4u.tools"; version="1.2"; sha256="1ssp3sk5kml8in1ggnir77cq2kpmdmrhjblvw67ydxp22sqw7vwr"; depends=[]; }; c3 = derive2 { name="c3"; version="0.3.0"; sha256="1c2k7ml153bby749qi3a6nckhwwr71mvvps9dkbzkxkwnmlwpz1h"; depends=[data_table dplyr htmlwidgets jsonlite lazyeval viridis]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; - cAIC4 = derive2 { name="cAIC4"; version="0.9"; sha256="0imy4kq09an9azqi3aahw3lsmby8km2am0w7fb314xq6ghzf9xmp"; depends=[lme4 Matrix mgcv mvtnorm nlme RLRsim]; }; + cAIC4 = derive2 { name="cAIC4"; version="1.0"; sha256="1qg73g0g029wkzpmp0fgvyfz8p1k3x38yqx0404cpb3dxj4n4hcg"; depends=[lme4 Matrix mgcv mvtnorm nlme RLRsim]; }; cIRT = derive2 { name="cIRT"; version="1.3.1"; sha256="1x7cbawzzpzripzyg4yavc9s6kx06ff4q151kbvylr9wsf78s6qg"; depends=[Rcpp RcppArmadillo]; }; - cNORM = derive2 { name="cNORM"; version="2.0.3"; sha256="1grq0vf55i76wkmj23rb2z2c93j1kdq9g5arpi6jvfylzpfm4y6c"; depends=[lattice latticeExtra leaps]; }; + cNORM = derive2 { name="cNORM"; version="2.1.0"; sha256="01iigvxl01h320yppnjlr46j7s2gz2g6yk00kfcr7b5zq8qzil2j"; depends=[lattice latticeExtra leaps]; }; cOde = derive2 { name="cOde"; version="1.0.0"; sha256="12222wlsk9l6m9y477mjl8x279xhs8c1l1wsq92khwycm1j06jfy"; depends=[]; }; cPCG = derive2 { name="cPCG"; version="1.0"; sha256="1pfbsv2rcjsryn6nr56a7i4yb7k0m3gdfn4q9l1kpzhmv9lic7m1"; depends=[Rcpp RcppArmadillo]; }; + cPseudoMaRg = derive2 { name="cPseudoMaRg"; version="1.0.1"; sha256="1mf78pilhx4mqv8n0xrdzn9wkvhnb3bs7rill7n588f18bnjp9mh"; depends=[]; }; cRegulome = derive2 { name="cRegulome"; version="0.3.2"; sha256="0cvxad73l85zsgqmis5p24v71kkzi784b8v5z07f0dh9yp41p96q"; depends=[DBI ggplot2 ggridges httr igraph R_utils RSQLite UpSetR VennDiagram]; }; cSEM = derive2 { name="cSEM"; version="0.4.0"; sha256="1h9n33akvh7cyl1r3pa64nxzr9z1723fqcfxa4p3kh6jp5ysqlvp"; depends=[abind alabama cli crayon expm future future_apply lavaan lifecycle magrittr MASS Matrix matrixcalc matrixStats polycor progressr psych purrr Rdpack rlang symmoments]; }; ca = derive2 { name="ca"; version="0.71.1"; sha256="095lk7p2b9835hc3a03c4019wg0baf0dhz6c2vqpaq1m9k4jy304"; depends=[]; }; - caMST = derive2 { name="caMST"; version="0.1.3"; sha256="1hhxyw7sbzm2v09xaxvq347gl8p5wkjxx43187mqbw0nzknlg5bg"; depends=[catR diagram mstR]; }; + caMST = derive2 { name="caMST"; version="0.1.4"; sha256="0467xfwqx6jwj442rlzkgyry8lnhvbxdazfpsy3wyd2iidb9a2g4"; depends=[catR diagram mstR]; }; caROC = derive2 { name="caROC"; version="0.1.5"; sha256="0cklvzfg95yyr37hdfmrna2z6lnhf9f6rrqcjsba1wjmqs8abgsh"; depends=[quantreg RColorBrewer]; }; caRamel = derive2 { name="caRamel"; version="1.2"; sha256="15w1p770cjsxs198rlc8fzs9m8a4pg5day2iya7xz0fkwb3xmm2z"; depends=[geometry]; }; caRecall = derive2 { name="caRecall"; version="0.1.0"; sha256="1ml8cfsi4h8q5f0y3m6s5v8sdldj302ndl75m6f7lagsiiiwhd77"; depends=[httr jsonlite tibble]; }; @@ -6469,14 +6717,15 @@ in with self; { cabinets = derive2 { name="cabinets"; version="0.6.0"; sha256="1pypn29v91zqncv5kxinfz0f633qmic7n87rf4amjrq83iiid6md"; depends=[cli crayon fs git2r glue R6 renv rstudioapi stringr]; }; cabootcrs = derive2 { name="cabootcrs"; version="2.0"; sha256="1a473ca90306brhfrzf5hw6d6v252kd2vfwkvgblwy26jmrrr2km"; depends=[lpSolve]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; - cachem = derive2 { name="cachem"; version="1.0.4"; sha256="1b1gk837rk9kbfq385ybrrk12ckxwvhjvf0z9635l3vw49wal4mh"; depends=[fastmap rlang]; }; + cache = derive2 { name="cache"; version="0.0.2"; sha256="0ffny3wbba755h6rs842z0hj5wyjhjin3b5lrxg09yqcjz03pll1"; depends=[cli digest here r_assert]; }; + cachem = derive2 { name="cachem"; version="1.0.6"; sha256="0r0q5w8lsxak46crnkbi739qzys90hlw7cqqqhv99xzkpkvm554s"; depends=[fastmap rlang]; }; caesar = derive2 { name="caesar"; version="1.1.0"; sha256="17w19m1c4a8x68bfbll71r9d3d34xnqw7lkhvqbnajd0cdm9xpa2"; depends=[binhf]; }; caffsim = derive2 { name="caffsim"; version="0.2.2"; sha256="00bkgmmqrydpji2pvhcchgl2p8w5ksby4g80i3h76q0bm2325w9h"; depends=[dplyr ggplot2 markdown mgcv shiny tibble tidyr]; }; cairoDevice = derive2 { name="cairoDevice"; version="2.28.2"; sha256="0hd8lcps8s2nmbqgrxc19dslsvppn1fbwylczx6h3isiv9zmxapj"; depends=[]; }; calACS = derive2 { name="calACS"; version="2.2.2"; sha256="0a53k2rzyjksb0ypr5zrask4a6mgiyrqx0l2z3lm218y8pk2jf1w"; depends=[]; }; calcUnique = derive2 { name="calcUnique"; version="0.1.2"; sha256="012mjayj90m5gsd8mhm2ic00pa0bnrjiidq9mv4vxj8slwp641rz"; depends=[]; }; calcWOI = derive2 { name="calcWOI"; version="1.0.3"; sha256="1bxsn9b99hnb365qvlzr0ymwavamlyhs5sm9s2fdjh4zv3f32n3l"; depends=[dualtrees LS2W wavethresh]; }; - calculus = derive2 { name="calculus"; version="0.3.0"; sha256="1wa5ap89cfcp0ancj9ivx5s2y0wqr2vmp9y115g7f6g772jwhscj"; depends=[Rcpp]; }; + calculus = derive2 { name="calculus"; version="0.3.1"; sha256="0m9cjc3bqv88vrrj51kd7c7xnczka5w9q0ln4l4nk514gvlr79bn"; depends=[Rcpp]; }; calendR = derive2 { name="calendR"; version="1.1"; sha256="1gji7ns35swdgg7bzq3vrzi4hnb98c5iw6r1j0k7nn2fdx7kbffp"; depends=[dplyr forcats gggibbous ggimage ggplot2 suncalc]; }; calendar = derive2 { name="calendar"; version="0.0.1"; sha256="18ha6vpx2bpk8p08hajiq2d201fbqhzcycp8ks6wrr06fy04z689"; depends=[lubridate tibble]; }; calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; @@ -6487,17 +6736,17 @@ in with self; { callr = derive2 { name="callr"; version="3.7.0"; sha256="02inaf3c7b0hikii7p2zwaphrq5myv4in92d9jxd1ilmhla5awnn"; depends=[processx R6]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; calpassapi = derive2 { name="calpassapi"; version="0.0.3"; sha256="1vhx5h7ah75cs1mlw25x7hal90m47596kr7fx2pd8fslq7il7p1b"; depends=[digest dplyr httr jsonlite stringr]; }; - campfin = derive2 { name="campfin"; version="1.0.7"; sha256="0xjzz7bh2ymqfkia41fw95njadj21p5mm9iamh1frq7gra12875d"; depends=[dplyr fs ggplot2 glue httr lubridate magrittr purrr readr rlang scales stringdist stringr tibble]; }; + campfin = derive2 { name="campfin"; version="1.0.8"; sha256="06shr4p4g3cwxs1iszpvpk83k2mss6za68fqkv5pjiz44pc89v80"; depends=[dplyr fs ggplot2 glue httr lubridate magrittr purrr readr rlang scales stringdist stringr tibble]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; camtrapR = derive2 { name="camtrapR"; version="2.0.3"; sha256="13zg8kx28il7rbyr2p3c1xdxx84b7shpcmgavzjqzh6wjm5bh5mh"; depends=[data_table overlap secr sp]; }; - cancensus = derive2 { name="cancensus"; version="0.4.2"; sha256="0wfcc5pvinwvby6yqwpxvby2ix6qyhzrbb04rs1dmrnnc4kk1h7w"; depends=[digest dplyr httr jsonlite rlang]; }; + cancensus = derive2 { name="cancensus"; version="0.4.3"; sha256="1i3hv76cg3ypd4fsl94kjrpqn8hr47h1a2vcsiask6c82f955fr1"; depends=[digest dplyr httr jsonlite rlang]; }; cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-5"; sha256="10njhfgj55b15kkvlb1648s1m7i8akb5502qc92aiyn0nw335701"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="1.1.0"; sha256="0y6azzs603bf7rrz8hfql754xsdywl35846hj70f6sn1dj5wbzlk"; depends=[MASS rmarkdown xtable]; }; - cansim = derive2 { name="cansim"; version="0.3.5"; sha256="0lqkyq2n8v2y172ihyb9vh3mimrkg2yx2c42cxdaz4p7gqiq7z8r"; depends=[dplyr httr jsonlite purrr readr rlang rvest stringr tibble xml2]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.32.9"; sha256="07ki6bak659k5r63b0bsin9s8lj722nnfdzlk5jysf27k5k7sn53"; depends=[htmlwidgets httr]; }; - canvasXpress_data = derive2 { name="canvasXpress.data"; version="1.32.7"; sha256="05ig4lnjjird6rkjpglvsb5l6wd8cs6vr69lwyzj6finzd5p5gsv"; depends=[]; }; + cansim = derive2 { name="cansim"; version="0.3.9"; sha256="1agh447w0l2v1fndbyjl92bxabn4yfibdd7vz4ya2wkqihzh1609"; depends=[DBI digest dplyr httr jsonlite purrr readr rlang RSQLite rvest stringr tibble xml2]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.35.0"; sha256="0ls5kqm233g0drlm5p0byk8k38s7h95wysg4rl9bj579cz67w4wq"; depends=[htmlwidgets httr]; }; + canvasXpress_data = derive2 { name="canvasXpress.data"; version="1.34.2"; sha256="10fdlb1yp5x9533jdammncfrrlxzpcz9as8i0209pwzjywvxby3s"; depends=[]; }; cap = derive2 { name="cap"; version="1.0"; sha256="1pv8hskxjbp589dn7rx80yaa1ld76x1w37bss2fyrys1p3qr78aa"; depends=[MASS multigroup]; }; cape = derive2 { name="cape"; version="3.1.0"; sha256="0r20c5z28jyc5djymwkfzczyi3rlnj20p00jhc4dsywjcp68fx6n"; depends=[abind caTools corpcor doParallel evd foreach here igraph Matrix pheatmap propagate qtl qtl2 qtl2convert R6 RColorBrewer regress shape stringr yaml]; }; caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; @@ -6509,21 +6758,21 @@ in with self; { captr = derive2 { name="captr"; version="0.3.0"; sha256="13j2nq9hm37g4h5fjdpz7kix0sqajdd7zssjfgil06ixfmnsijkx"; depends=[curl jsonlite]; }; capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="3.0-10"; sha256="1w95b7xm0bna3qm637pwyv4s7294ffz9dl153naprd79zv91dqqw"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; + car = derive2 { name="car"; version="3.0-11"; sha256="0b2l35656bi75hfvnjhzhlnrnbpjn0vv7nvny8gn65gm0rr94b5k"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; carData = derive2 { name="carData"; version="3.0-4"; sha256="09270j39n4jpswxqps20b12zaj8dz4rrqpk2l2j5bnf1xzizb9nd"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; - caracas = derive2 { name="caracas"; version="1.1.0"; sha256="1l171qyysjkbhpc3gn1lv9k3bbbdm9dv1y54ihi501c2wqfvkd3i"; depends=[magrittr reticulate]; }; - carat = derive2 { name="carat"; version="1.4"; sha256="1dlmmnsdy1vjiv0fw1k0h0xzd05hqryzc4vw9gbjj3ii6jyds8hk"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo stringr]; }; + caracas = derive2 { name="caracas"; version="1.1.1"; sha256="0s97if3sgsji9qah66ha328lvsjgpdyw6wvkgmfcy5r4974qfi71"; depends=[magrittr reticulate]; }; + carat = derive2 { name="carat"; version="2.0"; sha256="1rkk6m64xqapw4rxm1gxrpjs88cazlhfha9wwg481d2rd6cn4349"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo stringr]; }; carbonate = derive2 { name="carbonate"; version="0.1.3"; sha256="0y1wjrlh0rbfl1wz9028b637gs20giifp9ykg1yir2ak7fpwbq85"; depends=[clipr details httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; card = derive2 { name="card"; version="0.1.0"; sha256="1api0j06fp5av5a48vnnm1wvwdcskynf0xsj9pb41njxdh9v8daf"; depends=[broom data_table dplyr generics ggplot2 ggrepel hardhat Hmisc lubridate lutz magrittr purrr readr recipes rlang sf stringr survival tibble tidyr]; }; cardidates = derive2 { name="cardidates"; version="0.4.8"; sha256="1mfd5sgzswhs9rln2bgxx8c54z69xp8l5dfmx7jfh8jl43qkzpjf"; depends=[boot lattice pastecs]; }; care = derive2 { name="care"; version="1.1.10"; sha256="00h36by40v60mqzbf615a99sdfz0i42i57wybxrcm7y1y2la0da8"; depends=[corpcor]; }; careless = derive2 { name="careless"; version="1.2.1"; sha256="1zlkzrc9fw926knj6w7flv4q0w29k4aichawvprk94rk1bnrvdz5"; depends=[psych]; }; - caret = derive2 { name="caret"; version="6.0-86"; sha256="0dyflixdw98lvk2x3w136sw24ij0fwx5c7l709dmqr5z7xy1qjns"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr pROC recipes reshape2 withr]; }; + caret = derive2 { name="caret"; version="6.0-88"; sha256="174cyyhsw8s6jp80spmi40qq9sw5ys0r58v4ikp53kiw1dhd247s"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr pROC recipes reshape2 withr]; }; caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.1"; sha256="127gqd23xjis62irqviihzk80zydrdplwh65zcmd7ng29ih5wnby"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; }; carfima = derive2 { name="carfima"; version="2.0.2"; sha256="1n68jqn42m54xn7jq8qywrpnvggrcsgvgnlqg6nw0pgiplbkynih"; depends=[DEoptim invgamma mvtnorm pracma truncnorm]; }; - cargo = derive2 { name="cargo"; version="0.1.29"; sha256="108qpmj9ci5v0d3msnjdmqbk52n8nx7cmhfv3xfh2y1p26d9kqac"; depends=[]; }; + cargo = derive2 { name="cargo"; version="0.1.38"; sha256="0a6pkfgs8nzn65a5nckaak7hjf30k68ghw1n82vh4gf3fjijqkiv"; depends=[]; }; caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; caroline = derive2 { name="caroline"; version="0.7.6"; sha256="1afxxbrd7w628l4pxdmvwbs7mbgxlhnfq3nxk2s93w47gn7r9fp7"; depends=[]; }; carpenter = derive2 { name="carpenter"; version="0.2.2"; sha256="13ahhdc6f5ngrhb7slqbxzfs3wswixh0argyr6l46cv4fdkaa80s"; depends=[dplyr lazyeval magrittr pander tibble tidyr]; }; @@ -6541,16 +6790,16 @@ in with self; { casen = derive2 { name="casen"; version="0.1.4"; sha256="19f52vqrzqd8mmnaf39jmsm5mhydv74gpnb4rxr3n9w07ppb77c9"; depends=[dplyr glue haven janitor labelled magrittr purrr rlang srvyr survey tibble tidyr]; }; casino = derive2 { name="casino"; version="0.1.0"; sha256="07fphn46718gr1zm0xr43mwv7yk697xrc40lxxin315cf3gm0cka"; depends=[crayon dplyr ggplot2 magrittr purrr R6 tibble tidyr]; }; cassandRa = derive2 { name="cassandRa"; version="0.1.0"; sha256="0rwqzxbflxn1iyggm3mq6pkbl61mhk4vdwqwzlwrhrvvr2ib236r"; depends=[bipartite boot dplyr ggplot2 magrittr purrr reshape2 tidyr vegan]; }; - castor = derive2 { name="castor"; version="1.6.7"; sha256="07q2bv6lcbng26dkzr5s5nqjn762i76nwldv5j79ihbl6k67l1f6"; depends=[Matrix naturalsort nloptr Rcpp RSpectra]; }; + castor = derive2 { name="castor"; version="1.6.9"; sha256="01wk8qg938z8kffmdhwkjglv6i41s9z0s5248q4983m24qsx1hvl"; depends=[Matrix naturalsort nloptr Rcpp RSpectra]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; cat_dt = derive2 { name="cat.dt"; version="0.3.1"; sha256="0qr3azaxs339kfiiyzasc46xz4rb37prdwvdmv0c40cvba6zvapf"; depends=[ggplot2 Matrix Rglpk]; }; cat2cat = derive2 { name="cat2cat"; version="0.2.1"; sha256="0hjx14g97dsdbk2fzficbinl04n5gs2ccr2c813q6xda28al5bam"; depends=[assertthat caret data_table dplyr MASS progress randomForest rlang tidyr]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; catR = derive2 { name="catR"; version="3.16"; sha256="1w39dxfzqk065v64qzmfamx8p1njsv13a461s6clagbqmhysmzbx"; depends=[]; }; - catSurv = derive2 { name="catSurv"; version="1.3.0"; sha256="1vj7cw6v94p4ma61wwyxzsh36cj6fp38pqfjmyqr0czwgz04db05"; depends=[BH jsonlite ltm plyr Rcpp RcppArmadillo RcppGSL RcppParallel]; }; + catSurv = derive2 { name="catSurv"; version="1.4.0"; sha256="02hrq51yk7zxz6vr4ykjwjnim9g09d63vpy3g0sm9hidbxryq139"; depends=[BH jsonlite ltm plyr Rcpp RcppArmadillo RcppGSL RcppParallel]; }; catalog = derive2 { name="catalog"; version="0.1.0"; sha256="15bxlwypk0xgf0qggq6jgxa951ipmn61w370f3lcywkvaxw1h4ca"; depends=[dplyr sparklyr]; }; catch = derive2 { name="catch"; version="1.0.1"; sha256="1a63d1a6pzzirdzswngjj036jmg41hbiadwriws7k05qp95jdh6a"; depends=[MASS Matrix tensr]; }; - catchr = derive2 { name="catchr"; version="0.2.3"; sha256="1ix90lqx7m4rx0i6hzj1bph4yg9ch9w8qm3f9yigq1gm74zabzrl"; depends=[purrr rlang]; }; + catchr = derive2 { name="catchr"; version="0.2.31"; sha256="0mj3cgv2d217hcmyr8x0i83wysxhixgly5y1fs6jb1x09gs1cwnd"; depends=[purrr rlang]; }; catcont = derive2 { name="catcont"; version="0.5.0"; sha256="0ix6ipm3nn9aq5vxirjga2kwwfnxn4v8ggfjlg5v9027v2r8rb96"; depends=[dplyr]; }; catdap = derive2 { name="catdap"; version="1.3.5"; sha256="0fyhl69z2lznymvpzxra9qvcg85ggzkfjy68c6mzdmf1ja44d2k5"; depends=[]; }; catdata = derive2 { name="catdata"; version="1.2.2"; sha256="14kx7yi0cv6dyh9wjasb8gn6cp1bhglgwql7dc2a7lqvdcp0d5vj"; depends=[MASS]; }; @@ -6568,12 +6817,15 @@ in with self; { catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; cattonum = derive2 { name="cattonum"; version="0.0.5"; sha256="11h9nh2i2bmd0b562l5avhwpj9ppnfmzd9nsv94cymhwn5h6nmg6"; depends=[dplyr purrr Rcpp rlang tibble tidyselect]; }; causact = derive2 { name="causact"; version="0.4.0"; sha256="1mghawijsr0rpyy9pzvad11bf4qgfva7rb2pdkidm675a123sgc7"; depends=[coda cowplot DiagrammeR dplyr forcats ggplot2 greta htmlwidgets igraph magrittr purrr rlang rstudioapi stringr tidyr]; }; - causalCmprsk = derive2 { name="causalCmprsk"; version="1.0.1"; sha256="14sv0zimyh7crjc4s87mzkaiqbw3qjw0dcxi8arvx41jnbn4xpfr"; depends=[data_table doParallel foreach inline purrr survival]; }; + causal_decomp = derive2 { name="causal.decomp"; version="0.0.1"; sha256="08ccdzb5ssqhzkr3z3b8vz762mwflh33s6rrmsb9srvkk661lly2"; depends=[CBPS MASS nnet PSweight spelling SuppDists]; }; + causalCmprsk = derive2 { name="causalCmprsk"; version="1.0.3"; sha256="0s1jshh30jmkk2cx29dfhibmfzbpaqk7i0f8wayb204r73a58f8a"; depends=[data_table doParallel foreach inline purrr survival]; }; + causaldata = derive2 { name="causaldata"; version="0.1.1"; sha256="0d9c6lc053xxw3jpjwcy2cmkckhwfg5q67nf620mr5n4p173yxw0"; depends=[tibble]; }; causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; - causaleffect = derive2 { name="causaleffect"; version="1.3.12"; sha256="1qbxg3z6bnl0vk9fp832ly6whsh2yay39sq9zgwzgzc280rx9vfh"; depends=[igraph]; }; - causaloptim = derive2 { name="causaloptim"; version="0.7.1"; sha256="0i74plwzb69pvrqfwjf7nabvj57bid3ff3gm08hgvfincv1mh6xn"; depends=[igraph Rcpp shiny]; }; + causaleffect = derive2 { name="causaleffect"; version="1.3.13"; sha256="1b238cv24vf91wwgfzb4wdrxx2dywhhsd1hlr7ps0mj4dv8li2xk"; depends=[igraph]; }; + causaloptim = derive2 { name="causaloptim"; version="0.8.2"; sha256="0lwns19ab50hmxawj4gx0kf2f0vbky73ns6niqzrib07bxys6fh5"; depends=[igraph rcdd Rcpp shiny]; }; causalsens = derive2 { name="causalsens"; version="0.1.2"; sha256="1xy8nybflbw6hymc15mmz27ic6hcq89wryb8q6d4zi216lwv2nww"; depends=[]; }; - causalweight = derive2 { name="causalweight"; version="1.0.1"; sha256="0l23q1ra59afq5737k8gjx8mn69z7q04v9g7n36f7hq1rgzw8ff2"; depends=[e1071 fastDummies glmnet hdm LARF mvtnorm np ranger SuperLearner xgboost]; }; + causalweight = derive2 { name="causalweight"; version="1.0.2"; sha256="1l9wxp2p87qqv4fw4phbqicyppr3wcrxs52rxjxzdf11v9awnvjh"; depends=[e1071 fastDummies glmnet hdm LARF mvtnorm np ranger SuperLearner xgboost]; }; + caviarpd = derive2 { name="caviarpd"; version="0.2.17"; sha256="0wr99wndfr94dlzjxpf0pvc39zfw015srab8bdjpz3wbhcv23jni"; depends=[cluster salso]; }; cba = derive2 { name="cba"; version="0.2-21"; sha256="0j2hbp0xlfp28gqgnkcvmb4yp1kc5m2bp5x7pr4m1pz2b1s7h7m6"; depends=[proxy]; }; cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; }; cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; }; @@ -6581,19 +6833,20 @@ in with self; { cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; cblasr = derive2 { name="cblasr"; version="1.0.0"; sha256="1bz8d4124qpja4bvzn6k1swi89cfyrcpwg2nwyj4r8y0m1hbpc71"; depends=[Rcpp]; }; cbq = derive2 { name="cbq"; version="0.2.0.2"; sha256="0vg1mhk147pib61v4im3ikc551c2nmmcfah9fjw9c978gf81g32n"; depends=[BH Formula Rcpp RcppEigen rstan rstantools StanHeaders]; }; - cbsem = derive2 { name="cbsem"; version="1.0.0"; sha256="0gc14rhfy566yw2yqzq7yk0xanpzcz7zp3km483azgk816vakbn4"; depends=[]; }; cbsodataR = derive2 { name="cbsodataR"; version="0.5.1"; sha256="02dalankaa4lfv9r7bc9cphmwb0mq6an7bs44rihipj8dsjd0v9y"; depends=[jsonlite whisker]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; ccRemover = derive2 { name="ccRemover"; version="1.0.4"; sha256="1npd0vx2hyg7qbwd650987i49v5cxr6i1hlj5rw6fxc0b808s596"; depends=[]; }; + ccTensor = derive2 { name="ccTensor"; version="1.0.2"; sha256="1r1cqx5kn12xkczpw7f8ij16csnnfy3gjf3kcgr95f070lhd1qna"; depends=[fields igraph MASS rTensor]; }; ccaPP = derive2 { name="ccaPP"; version="0.3.3"; sha256="1p08gih67950khfkzhiksa8qw2f9mrmyqiiapsjpv6zc5g0lchhk"; depends=[pcaPP Rcpp RcppArmadillo robustbase]; }; ccboost = derive2 { name="ccboost"; version="0.1-1.3"; sha256="165v44xghm9xgc9ad5hadvq81mshb3y4rzpi65zc93ggr4jsdfxr"; depends=[mpath xgboost]; }; cccd = derive2 { name="cccd"; version="1.5"; sha256="0m364zsrgr7mh1yhl2lqxpaf71gzq3y3pp9qgnj4spiy4iadyy7i"; depends=[deldir FNN igraph proxy]; }; cccp = derive2 { name="cccp"; version="0.2-7"; sha256="080rr1nsj465458yfawbcfgvdng42gzbzjzblvkdm5c1hkwnn7ij"; depends=[Rcpp RcppArmadillo]; }; cccrm = derive2 { name="cccrm"; version="2.0.3"; sha256="0kp0i83xm4i4fwkkizacpdgdjsg9p9gr1q7ibdsgy8qwdm50sz9z"; depends=[Deriv dplyr nlme tidyselect]; }; ccda = derive2 { name="ccda"; version="1.1.1"; sha256="1kka4vmhpcnl4skdmijzsxrfj6dgax6hhlxvp7gkqlfaazq8pzf0"; depends=[MASS]; }; + ccdf = derive2 { name="ccdf"; version="1.1.4"; sha256="1kab0qa731w5hhnpdqhf5jbyyq66xjx1xyxnkzwc0qy75cgyc03i"; depends=[CompQuadForm cowplot doParallel foreach ggplot2 matrixStats pbapply randomForest RcppNumerical rpart statmod survey viridisLite]; }; ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.5"; sha256="171k70p4qyasr385ma3cvcga2b4nbz2dfry78wqx5yb1aa6wwcyc"; depends=[Rcpp sparsebnUtils]; }; cchs = derive2 { name="cchs"; version="0.4.2"; sha256="18zk50g7rw8cb09fczpcdgzjl1b06rgf6lwy99sg7nq4scnzgzm8"; depends=[survival]; }; - cchsflow = derive2 { name="cchsflow"; version="1.8.0"; sha256="1i1rvl70dr759zjxvvninlh0awgxqajky875pyamdzc9zna1wb9r"; depends=[dplyr haven magrittr sjlabelled stringr]; }; + cchsflow = derive2 { name="cchsflow"; version="1.8.2"; sha256="16vdjg68srix5g62x1chgjdr8pp8ypvn3kd64n6jnfyhxhia3jw6"; depends=[dplyr haven magrittr sjlabelled stringr]; }; ccid = derive2 { name="ccid"; version="1.0.0"; sha256="1wzz8bydcy9x7rnrvvircd8lkrgx0p7x2q5hihxslz3siy1jjgaj"; depends=[gdata GeneNet hdbinseg IDetect]; }; cclust = derive2 { name="cclust"; version="0.6-22"; sha256="1wyiwq16zyvc0vqbap1y4zfkvlgzwzjrx4vmrjhzlqxci8jryjbs"; depends=[]; }; ccmReportR = derive2 { name="ccmReportR"; version="0.1.0"; sha256="0jxxz26f0azp9xafqilvbbfhzn4ys8q4pf4c8bbnmwwbckmjajxm"; depends=[dplyr httr jsonlite keyring lubridate purrr rlang tibble]; }; @@ -6605,21 +6858,21 @@ in with self; { ccss = derive2 { name="ccss"; version="1.0"; sha256="0m2facn6kwxrjxg9a8z0pjnhp0rkgw6nxj6sac93ig24zygx4380"; depends=[]; }; cctools = derive2 { name="cctools"; version="0.1.2"; sha256="03lp9pa9qr2hi584ivvmswxmwjw1c3a6xqladpqldjhzvzpxvcwi"; depends=[qrng Rcpp RcppArmadillo]; }; cd = derive2 { name="cd"; version="0.1.0"; sha256="1zzhkrsidny5h6jvbip2a4i4klqdgw7s1w8h8hkc3mpbxjfr615r"; depends=[]; }; - cdata = derive2 { name="cdata"; version="1.1.9"; sha256="1hnc74psz6940v0yqw7zrp9a75g0bmq5a0qfpddxkcij3vm6qiya"; depends=[rqdatatable rquery wrapr]; }; + cdata = derive2 { name="cdata"; version="1.2.0"; sha256="0n1abljjvbmbgi9i8k7vbma92r21w50rz6jys39gq62hy3qr6vzl"; depends=[rqdatatable rquery wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; - cdcatR = derive2 { name="cdcatR"; version="1.0.2"; sha256="12xrk4v8rlqkndw3pdzvzv7qi86y2xvvsnh36nmpib4qdf6b2jry"; depends=[cowplot doSNOW foreach GDINA ggplot2 NPCD]; }; - cdcfluview = derive2 { name="cdcfluview"; version="0.9.3"; sha256="05ay1qgf54nh99blwrhi209mg854y6553h6112l2vkydn2vis1ff"; depends=[dplyr httr jsonlite MMWRweek progress purrr readr sf tibble units xml2]; }; + cdcatR = derive2 { name="cdcatR"; version="1.0.3"; sha256="12irmnms9w5pkwixi8wzy2abxzrnqv3nsmj87ppw24j16cziy35i"; depends=[cowplot doSNOW foreach GDINA ggplot2 NPCD]; }; + cdcfluview = derive2 { name="cdcfluview"; version="0.9.4"; sha256="1b8x66vf34hh8r1fdk16kwcmrzw34z64fvaax7ypiihc9xf1askp"; depends=[dplyr httr jsonlite MMWRweek progress purrr readr sf tibble units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="2.0.3"; sha256="0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9"; depends=[ks mvtnorm Rcpp]; }; cder = derive2 { name="cder"; version="0.2-2"; sha256="0aw2c170sqx2y4iz16avqijahwxlsaz590mxvsx4bicfd8nrcynk"; depends=[curl dplyr glue lubridate readr rlang stringr tibble]; }; - cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.2"; sha256="094mk2hvxww2lndx5wkw368ynqx6klbdwl30d1yv7kqmr2yy7388"; depends=[Formula MASS pracma]; }; + cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.5"; sha256="04vckffv6iwsz4s3imkij5nvm64p3faakbhr9cmvlx5rs5g8plw4"; depends=[Formula MASS pracma]; }; cdlTools = derive2 { name="cdlTools"; version="0.15"; sha256="1p5d48v6nwlrgqqi0sg98zfhiycjcha6g12a7515xrvp6f5p28jn"; depends=[httr raster]; }; cdlei = derive2 { name="cdlei"; version="1.0"; sha256="1zsgryrwr1nqhcyizrh67lm953b87ih9l4rvc6i59s4vg2ph1ph1"; depends=[]; }; + cdmTools = derive2 { name="cdmTools"; version="1.0.0"; sha256="1f131ix3b9np3g81yn172giglrahg9k67c3l7i5kpscfp4qp844z"; depends=[combinat GDINA ggplot2 GPArotation psych sirt]; }; cdom = derive2 { name="cdom"; version="0.1.0"; sha256="00xqqqhskjlkz8ii7kqyabxk8995w7g9jiz1isyqjpwg8nsa3x28"; depends=[broom ggplot2 minpack_lm tidyr]; }; cdparcoord = derive2 { name="cdparcoord"; version="1.0.1"; sha256="0ym2ypw4bsvmx9q4vskrq4pdd92y47vs8pay8san40rgzwqr2agb"; depends=[data_table freqparcoord partools plotly]; }; cds = derive2 { name="cds"; version="1.0.3"; sha256="1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05"; depends=[clue colorspace copula limSolve MASS]; }; ceRtainty = derive2 { name="ceRtainty"; version="1.0.0"; sha256="01wgvjpxqwhgh6vx9vbmiv4d88bps790l6ij3gw5w69hbrrd9ixi"; depends=[dplyr RColorBrewer tidyr]; }; cec2013 = derive2 { name="cec2013"; version="0.1-5"; sha256="07i2vp1x3qaw5di5vr5z70d47hh9174pjckjlhgv0f2w97slwc1i"; depends=[]; }; - cecs = derive2 { name="cecs"; version="0.2.0"; sha256="0s5lwlxgky9cldfi6qfxvszsfcmm2rs8ibszdv4y9fixvyl6r1r8"; depends=[cec2013 stringr]; }; ced = derive2 { name="ced"; version="1.0.1"; sha256="0xrf3y1cr4dylhh2xr1gggnwdwn7riz37g6yw55hyryg03hxkms6"; depends=[Rcpp]; }; ceg = derive2 { name="ceg"; version="0.1.0"; sha256="01la7kv0a3inc9vy5x010ysicfiv404bqfgs8csvqixviap9rd74"; depends=[graph Rgraphviz]; }; celestial = derive2 { name="celestial"; version="1.4.6"; sha256="1gls0qvr8mxz79lsmk76v253f747g0cqys8p8wjmpijs8r0pyr4z"; depends=[NISTunits pracma RANN]; }; @@ -6628,14 +6881,14 @@ in with self; { cellWise = derive2 { name="cellWise"; version="2.2.5"; sha256="0w0n5l1icyjrz7hk61zmdphx48w6d1ldn8h9br4g6k85m4zq57h6"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 robustbase rrcov scales svd]; }; cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; }; celltrackR = derive2 { name="celltrackR"; version="0.3.1"; sha256="1mnqaklc3rkx5mm41n99ky11bjs4l0dppapkwfvkyg3a0h0xzsbb"; depends=[ellipse]; }; - cem = derive2 { name="cem"; version="1.1.27"; sha256="096ilbrkxjsbyf3pk126y2dqc3hzbnfpagr96byagap01q24pyij"; depends=[combinat lattice MatchIt nlme randomForest]; }; - cemco = derive2 { name="cemco"; version="0.1"; sha256="00x9313rlxjb1lrfgx394awyhn2ivkn291q6sb5rpmghsvwq0qpb"; depends=[clusteval doParallel foreach MASS mclust mvtnorm nnet rootSolve]; }; + cem = derive2 { name="cem"; version="1.1.29"; sha256="1awb3y1r18mkvwl0rr41a8zcvbwg8b00k010096asz3qywzaxiql"; depends=[combinat lattice MatchIt nlme randomForest]; }; cenGAM = derive2 { name="cenGAM"; version="0.5.3"; sha256="0qic2g2bq24k9jimxdk8g7bsmi4br2r6159ipdhh5ym81ji3sf5p"; depends=[mgcv]; }; cenROC = derive2 { name="cenROC"; version="1.2.0"; sha256="07ja3yyqmb9cs76if32aksgcwki3y6nh13lvn9j0bdgbgqx65f3r"; depends=[condSURV icenReg Rcpp RcppEigen survival]; }; censCov = derive2 { name="censCov"; version="1.0-0"; sha256="0i9vmyi12f1m5xnrl4cxk3z9qv7ymzxsyf4gbnpg1ph63yfnhv3g"; depends=[survival]; }; censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; }; censReg = derive2 { name="censReg"; version="0.5-32"; sha256="044f3a1vkr318drcipv9zz5qsx85ld95x7fsy0w6cpc6zlkwxsyb"; depends=[glmmML maxLik miscTools plm sandwich]; }; - censo2017 = derive2 { name="censo2017"; version="0.4"; sha256="00dzdk47rrs41sa7mx6sl8pk8rnny22wr8i0b5yyaydp16b2bd0r"; depends=[cli crayon DBI duckdb httr purrr rstudioapi tibble]; }; + censable = derive2 { name="censable"; version="0.0.2"; sha256="0xkn1v9qp6himlfcp0ap0h51bnqddx3phwidnrdl6ds3yw6iyd9d"; depends=[dplyr magrittr memoise rlang sf stringr tibble tidycensus]; }; + censo2017 = derive2 { name="censo2017"; version="0.6.1"; sha256="02q25kxv6kxj3634xk7vd3mwa8qvnmagwyh020z9yq6l6qfn2s6b"; depends=[cli crayon DBI duckdb httr purrr rstudioapi tibble]; }; censorcopula = derive2 { name="censorcopula"; version="2.0"; sha256="16pk4xlpliif02qznrhvl8qmrr6k4kknygqxcm83nsjxy6dcyga8"; depends=[copula]; }; censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; }; censusapi = derive2 { name="censusapi"; version="0.7.1"; sha256="1vvvbig4q9ix8qdl67y2chya2qimaawanh7vznylj1x7is0j49ia"; depends=[httr jsonlite]; }; @@ -6656,8 +6909,9 @@ in with self; { ceterisParibus = derive2 { name="ceterisParibus"; version="0.4.2"; sha256="0hxklydsqb69y5sv2hanp5ja9k0063swf5si1j6gcj15lp7phpif"; depends=[DALEX ggplot2 gower knitr]; }; cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; }; cfda = derive2 { name="cfda"; version="0.9.9"; sha256="07k531vp2chsrkw5d0iws3jg23yz0gni0bjn03kr6irw89r4py9p"; depends=[diagram fda ggplot2 mgcv msm pbapply]; }; - cfdecomp = derive2 { name="cfdecomp"; version="0.3.0"; sha256="12pckaf7pqpx4a4a7xc0gy0hcvafbgzrnw6ia45gnivmpa165jli"; depends=[]; }; + cfdecomp = derive2 { name="cfdecomp"; version="0.4.0"; sha256="0g61gpihk5kbbrqzn15fqjv3bawsq1vq3sdssbzs5j96afmf2aq8"; depends=[]; }; cffdrs = derive2 { name="cffdrs"; version="1.8.18"; sha256="15bl1sfm2yz897b5w0x0kvyf2z3rx32n436gsnsx5gd32v5v18w1"; depends=[data_table doParallel foreach geosphere raster rgdal]; }; + cfid = derive2 { name="cfid"; version="0.1.2"; sha256="0hy2vq3izj4938sgzmgpp4m9d49hpiqh9jd1wjf5g54x3v1yzy89"; depends=[]; }; cfma = derive2 { name="cfma"; version="1.0"; sha256="006z5g3rqpg44jqdf6ivyxr47sxm5cd9cqhayfi8qk73xx5w4lv9"; depends=[]; }; cfmortality = derive2 { name="cfmortality"; version="0.3.0"; sha256="0dgwv89fzylznc6jr41ixzfs1gfs3np4gf46bk6pcd09l1kbx3lc"; depends=[]; }; cforward = derive2 { name="cforward"; version="0.1.0"; sha256="1vhac0669f20ckx7qi5v8rnbmscb87gw8rfn555xazdfbvri6m0w"; depends=[dplyr magrittr survival tibble]; }; @@ -6669,16 +6923,20 @@ in with self; { cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; cglasso = derive2 { name="cglasso"; version="2.0.4"; sha256="0rdxmvndq97jj18sxabb5ggfqkdjbrgzsi4byw7w3jns9w61wbvz"; depends=[igraph MASS]; }; cglm = derive2 { name="cglm"; version="1.1"; sha256="1r3wrds5lbirzzqsi12prwykxa5361jb95pq7j95nlp6y8kcb94j"; depends=[data_table nleqslv Rcpp RcppArmadillo]; }; - cgmanalysis = derive2 { name="cgmanalysis"; version="2.7.1"; sha256="1ji1hzk7mvy77vcm9cwin7mqymmr006v3dn40rpjdp5jp2nyvrq0"; depends=[ggplot2 lubridate pastecs pracma readr readxl XML zoo]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="2.7.2"; sha256="0rjs86qyqsz9x84h4lvv9kwam8aapcfhjkbsr8c3d5faddnh5vh6"; depends=[ggplot2 lubridate pastecs pracma readr readxl XML zoo]; }; cgmquantify = derive2 { name="cgmquantify"; version="0.1.0"; sha256="11pw1layzx9a8qy7n06nyc59mi5r07krhxw6hhybbqkdglzp511w"; depends=[dplyr ggplot2 hms magrittr tidyverse]; }; cgraph = derive2 { name="cgraph"; version="6.0.1"; sha256="0hmp07iz7ya3j8jaghm4pa0b84lsinc48rsibbh47sd3i6pkxfik"; depends=[]; }; cgwtools = derive2 { name="cgwtools"; version="3.3"; sha256="1dl9ghwfzjrl5pd6izy4c5qyfq2s8ywnqh97y1bhwmcw2qwb4ci6"; depends=[gmp]; }; - chandwich = derive2 { name="chandwich"; version="1.1.3"; sha256="00lry1y4m1m1q5wrcscxcg9k6caznl58nznzn7n7njp6n1xzmwdw"; depends=[numDeriv]; }; + ch = derive2 { name="ch"; version="0.1.0.2"; sha256="1ryh2xr1ix4qznq1svi4gdr4qy6v6rg597z2zl6zw32s2xq6ssx6"; depends=[clipr crayon ggplot2 magrittr MASS polynom pracma Ryacas]; }; + chameleon = derive2 { name="chameleon"; version="0.2-0"; sha256="1q631l40gdknbv7dzvzgfdi0mx7rs4hlfkimhvf6li6ajmmh3sa5"; depends=[clue ggplot2 umap]; }; + chandwich = derive2 { name="chandwich"; version="1.1.4"; sha256="0znk0nmh77j6a6wwxqlv8h155pihc9g1v3w7fgsrwna0pkjqmhn4"; depends=[numDeriv]; }; changedetection = derive2 { name="changedetection"; version="0.2.0"; sha256="0j8x7qyna7qgjhx56yxav1g3wj3r47zvx2hivybsjis2gqbl82hr"; depends=[glmnet L1pack Rdpack]; }; changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; }; changepoint_geo = derive2 { name="changepoint.geo"; version="1.0.1"; sha256="1jlixdrq97n6bh09jq3hamlwkqfqbmqs14kr8swx20f8fvfr3fj2"; depends=[changepoint changepoint_np ggplot2 Rdpack]; }; + changepoint_influence = derive2 { name="changepoint.influence"; version="1.0.1"; sha256="03m7vyqy0qdvkrr0cgxc2g019rjkmsc0fwnzkp2gxbbhvwhs4qzd"; depends=[changepoint data_table ggplot2 gridExtra reshape]; }; changepoint_mv = derive2 { name="changepoint.mv"; version="1.0.2"; sha256="0bji0m4ks2lf9s1rnq58w97ywpgs3m9rpm5p5f70f0kn33yffrix"; depends=[assertive ggplot2 Rcpp Rdpack reshape2 tbart zoo]; }; changepoint_np = derive2 { name="changepoint.np"; version="1.0.3"; sha256="04i7bgbsr06iryfm5r0f9ddja0d6zlabjf1pdpic2bpqssdjndbv"; depends=[changepoint Rdpack zoo]; }; + changepointTests = derive2 { name="changepointTests"; version="0.1.1"; sha256="0sbs9sl4p4l3h9ih007p166slayfj66ppqw01xxkxcdqciqw0ra0"; depends=[doParallel foreach]; }; changepointsHD = derive2 { name="changepointsHD"; version="0.3.3"; sha256="1wdhmkg21kb5jd95a0aqqp2qgdkndc69rbdxjf792gq8f1rigarh"; depends=[Rcpp RcppArmadillo]; }; changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; }; changer = derive2 { name="changer"; version="0.0.3"; sha256="1pmnspadkshz7z9f275vks1xjh6a9k37h7j51dqdjrqilzq7y6sf"; depends=[available devtools git2r]; }; @@ -6692,34 +6950,33 @@ in with self; { checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; }; checkdown = derive2 { name="checkdown"; version="0.0.7"; sha256="1bjij565vss2x8xbgq5qxx1d1snfw9wnphj0jhbm6vxxh2hg6g46"; depends=[knitr markdown]; }; checkmate = derive2 { name="checkmate"; version="2.0.0"; sha256="193gkifr9spp0x0rwnjq1spdhjkfkh4mv27iklskcj604075phhd"; depends=[backports]; }; - checkpoint = derive2 { name="checkpoint"; version="0.4.10"; sha256="0shj9pgpr3fhf1cwzr8q583nyl6f2gcjqn8b5mjy8gvn0fbswqkk"; depends=[]; }; + checkpoint = derive2 { name="checkpoint"; version="1.0.0"; sha256="19w5l1psjrhhx9n3sa258xvfgwp0jsdkjab757h2kjk36w4lcqfk"; depends=[jsonlite pkgdepends withr yaml]; }; checkr = derive2 { name="checkr"; version="0.5.0"; sha256="14hkpfbw5ibdwz2jygir2f2bb2qgrj62gn3449n4dif31nswaj2f"; depends=[err]; }; cheddar = derive2 { name="cheddar"; version="0.1-636"; sha256="1lf39v0p583jgiyb02vx0rgbwzmmhgkfpwjib2fzh9ffbs8bfk66"; depends=[]; }; cheese = derive2 { name="cheese"; version="0.1.1"; sha256="1r4n9li33am0bsyl57kzg1m9g4w0pzbw6garcdp3qk7lwqxy2y26"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; chemCal = derive2 { name="chemCal"; version="0.2.2"; sha256="1g0wvw929s3m9ga8n5rn1xfknjpfidyz63q9ypva81057jc5iakk"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.1.0"; sha256="0b7qwysqzvhhyxdvvr6lb65aqwhrh1a2wk3p5xplnfjxpy9gh7lm"; depends=[caret class e1071 elasticnet fingerprint lars MASS MSQC nnet pls pROC randomForest rcdk rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; - cherry = derive2 { name="cherry"; version="0.6-13"; sha256="1bpahdymkc2w6mc5pjyq4q59iwzskw37swx3sw4rnbmnhzhwaf8n"; depends=[bitops hommel lpSolve Matrix]; }; + cherry = derive2 { name="cherry"; version="0.6-14"; sha256="03ipvd2ldzk7xsalkgcx0cyp9cp9b8qqjvz8nl0am412j3z9i5wg"; depends=[bitops hommel lpSolve]; }; cherryblossom = derive2 { name="cherryblossom"; version="0.1.0"; sha256="1fn0xi65y0w1gmyrjlh8lb2is34r2dc5bym0ynrgjv8h595nzhwp"; depends=[]; }; chess = derive2 { name="chess"; version="1.0.1"; sha256="0b0lz8r48bvksjnh385p1ni22hw1yvs6255pjbpj49ga9dwziin0"; depends=[cli magrittr purrr reticulate rsvg]; }; chest = derive2 { name="chest"; version="0.3.5"; sha256="0jmihq8p6gxyxgmpdgwmnhl98s38pqzdzdqzqiy54zyqgd69plh8"; depends=[broom dplyr forestplot generics ggplot2 MASS speedglm survival tibble]; }; chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; - chicane = derive2 { name="chicane"; version="0.1.4"; sha256="1p7arlidwlxndif7a6p2p835zgm6f4n2zxyab1v9m6qrafl584h4"; depends=[bedr data_table doParallel foreach gamlss gamlss_tr iterators knitr MASS rmarkdown]; }; + chicane = derive2 { name="chicane"; version="0.1.7"; sha256="0gaq1icwbcn1lzj92qhmai2cwvkm26m8srw988cb6xd51v819v3l"; depends=[bedr data_table doParallel foreach gamlss gamlss_tr iterators knitr MASS rmarkdown]; }; chickn = derive2 { name="chickn"; version="1.2.3"; sha256="1d3xl2pigan6vb29nk2ks04dsl5vy16cv9z7miskmhcqcx2wm1qb"; depends=[bigstatsr doParallel doRNG foreach MASS mvnfast nloptr pracma Rcpp RcppArmadillo RcppParallel Rdpack rmio zipfR]; }; childdevdata = derive2 { name="childdevdata"; version="1.1.0"; sha256="016x6xhqq1mfqlj9m5qv63k639xnqnrf5h6rdcyaa8sxn7nv34zm"; depends=[]; }; - childesr = derive2 { name="childesr"; version="0.2.1"; sha256="0dy2qkxyc1hl2v3ssvq7vynj2k7h1lky0ig7ph42pqsjqwfpk06d"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; childhoodmortality = derive2 { name="childhoodmortality"; version="0.3.0"; sha256="1ixd10jyzgr1ssnjas35kngpsqyjzl73wwpvcspv06cn12sv2b8d"; depends=[dplyr matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.7.6"; sha256="1h3p80byfma8zhivlq9jmdszm793chggnhb93qjnbl3vmnmnxgg7"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr purrrlyr reshape2 tibble tidyr VGAM]; }; chilemapas = derive2 { name="chilemapas"; version="0.2"; sha256="0s2f5bhr7d64rlk4x7cv6zjrbnf5g86lgg026svgrdxvs1vqa4as"; depends=[dplyr magrittr rlang rmapshaper sf stringr]; }; - chillR = derive2 { name="chillR"; version="0.72.2"; sha256="0hdgh8q37vqkmfk26hyxxwhxd891xwjgxblq6l8178rwlm3hs2bm"; depends=[assertthat dplyr fields GenSA ggplot2 httr jsonlite Kendall pls plyr R_utils raster Rcpp RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; + chillR = derive2 { name="chillR"; version="0.72.4"; sha256="0a0m1jcdxy7sy5sjir8bgwv70z8gk063qgr26lj1vksxi9n63fzc"; depends=[assertthat dplyr fields GenSA ggplot2 httr jsonlite Kendall lubridate pls plyr R_utils raster Rcpp RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.2.3"; sha256="0hlna52g00nh3908wgpb9ldgghff3gfjx24vmk5gikkazdqk9zrh"; depends=[jiebaR Matrix NLP purrr slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="1.0-2"; sha256="0q30ncnvbipvqbpxrx2yb68i2ybdfl1fbzj3f12dd2wmjjl72q1x"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; chirps = derive2 { name="chirps"; version="0.1.2"; sha256="0lvrlpsvncyyzli84ivzmknk0g5g3lhciwl35wmrgyxf08bs4bqb"; depends=[crul jsonlite sf]; }; chisq_posthoc_test = derive2 { name="chisq.posthoc.test"; version="0.1.2"; sha256="0lvj3jqhaj1ijjpzvpq3fn3a1y3fgv69pxh91j6k958pn6vmp40i"; depends=[]; }; - chk = derive2 { name="chk"; version="0.5.1"; sha256="09qw8i97mbfgymx5nf6iw4s46hqyaa7434y3bwkzmqjh9f18xfmh"; depends=[lifecycle rlang]; }; + chk = derive2 { name="chk"; version="0.7.0"; sha256="1fxsxgvd08lkb6amjgs4x48dhqr046mmjngjfgy2ya9cl2shd7ls"; depends=[lifecycle rlang]; }; chlorpromazineR = derive2 { name="chlorpromazineR"; version="0.2.0"; sha256="0w7v6xk3vyf9dyf9bh5v9516v78yhcdvy7h1140pg2yw8xmfyr0r"; depends=[]; }; - chngpt = derive2 { name="chngpt"; version="2020.10-12"; sha256="0i8vzqycqd6sinnpb8f88b7pv76d54x09l3iw2s8c6hs46rybqch"; depends=[boot kyotil lme4 MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2021.5-12"; sha256="00g724b0w7dd95s2k9x10yi9xz2qfkxrpa98npbfq2w1pb8mgc57"; depends=[boot kyotil lme4 MASS RhpcBLASctl survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-3"; sha256="1nsc8p4svfc6z7ckffl24c0acnaxi6cnpz7jq03vzn6spxvpjcmw"; depends=[AlgDesign]; }; cholera = derive2 { name="cholera"; version="0.7.5"; sha256="1r9dfmx7w3g7qicfaz81j4rprf5svckf6qnkjdmmm6p6086cl93k"; depends=[deldir ggplot2 HistData igraph KernSmooth pracma RColorBrewer sp threejs TSP viridisLite]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; @@ -6734,44 +6991,48 @@ in with self; { chromoMap = derive2 { name="chromoMap"; version="0.3.1"; sha256="06iy8rip99bsw5vadf6f7gpxarj4hs2japjq39zgzws8rrzvqccm"; depends=[htmltools htmlwidgets]; }; chromseq = derive2 { name="chromseq"; version="0.1.3"; sha256="0m9dnm50iw176ffn6syd3538hxmjhkrxfzaf13210q100wk0lgz2"; depends=[]; }; chron = derive2 { name="chron"; version="2.3-56"; sha256="0p9zz96jfyf139924hdwkzhr8knkjvx6547ac53rknm3a6wwngl6"; depends=[]; }; - chronicle = derive2 { name="chronicle"; version="0.2.5"; sha256="0489fh393pfvxnfb6lflrmypvrsr9i6r4lfgp8rapnkl757n00d8"; depends=[data_table DT dygraphs ggplot2 glue knitr magrittr plotly prettydoc purrr readr rlang rmarkdown rmdformats scales skimr viridis zoo]; }; + chronicle = derive2 { name="chronicle"; version="0.3"; sha256="0yfrxr93fbxgpxjs1gb56pdx1kk4nn9xvy2csgl1rhzrgbl343m3"; depends=[data_table dplyr DT dygraphs ggplot2 glue knitr magrittr plotly prettydoc purrr readr rlang rmarkdown rmdformats scales skimr viridis zoo]; }; + chronochrt = derive2 { name="chronochrt"; version="0.1.0"; sha256="0n4921bxh7v5gbq65dsppcj9hs54ay6s219cmzqwhlgb2pv0mhmp"; depends=[dplyr ggplot2 magick magrittr readr rlang tibble tidyr tidyselect]; }; chronosphere = derive2 { name="chronosphere"; version="0.4.1"; sha256="1x4w4kap7cwkmrq4v6bvhlzm299i8chh4k02873ipnnqrhjxdhka"; depends=[raster sp]; }; chunkR = derive2 { name="chunkR"; version="1.1.1"; sha256="1kw3hsx5k4cdicx0hc1v0mf2nzvqg95shx2xv05vb2pass48qw48"; depends=[Rcpp]; }; chunked = derive2 { name="chunked"; version="0.5.1"; sha256="08gw05bng4p35kfd9zcxz1l73jhlxlymw55vrsl6f2771l1r4bz5"; depends=[DBI dplyr LaF progress rlang]; }; chunkhooks = derive2 { name="chunkhooks"; version="0.0.1"; sha256="1kps7widb9ql01njy8xl03lplrybl2ci5fvx5vzzwnwps6s4y3fm"; depends=[knitr measurements prettyunits]; }; + chyper = derive2 { name="chyper"; version="0.3.1"; sha256="0ps66gqngi38lz8sq4zsvdbmj0qn4pz8aax9dgmngmwb8hdd503r"; depends=[]; }; ciTools = derive2 { name="ciTools"; version="0.6.1"; sha256="0d6aq4wcxi1q59g4kfx49x1li41rfwx2z2v4xzz2xkldn6h1794z"; depends=[arm boot dplyr lme4 MASS survival]; }; ciccr = derive2 { name="ciccr"; version="0.2.0"; sha256="0xmjqwlw2xq332pyagrn8ay6ipyvmxw1q7zf4cza4ly2mz9mf1ws"; depends=[]; }; cicerone = derive2 { name="cicerone"; version="1.0.4"; sha256="1z3i720970kmczg01wxwbyqwd9zby69lchw3pgqwpn2bjr66jimh"; depends=[assertthat R6 shiny]; }; cif = derive2 { name="cif"; version="0.0.9"; sha256="1rs44di1qjf6j89xg2x0a3s3lsnqxwnz0wcnys8xp68q198gipb6"; depends=[lubridate]; }; cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; - ciftiTools = derive2 { name="ciftiTools"; version="0.2.2"; sha256="07p34adw3bxfskmj5lgcd16y41qw9fynjqhcp2b55ljar0lbdj40"; depends=[fields gifti oro_nifti RColorBrewer rgl RNifti viridisLite xml2]; }; + ciftiTools = derive2 { name="ciftiTools"; version="0.6.1"; sha256="15r7h1z4ik0qp3rcssnpm66q5sgb35pjhimyq22447r6a51cz6c2"; depends=[fields gifti oro_nifti RColorBrewer rgl RNifti viridisLite xml2]; }; cimir = derive2 { name="cimir"; version="0.4-1"; sha256="0r8fmvqcihxsj0w1g2xm02wwqcgrwadbl5n1dzksw8zpcjfw7fkn"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; cinaR = derive2 { name="cinaR"; version="0.2.1"; sha256="0i0fkh5j494fy9zy0p67ashqsa7vw3jhf092sw3nfyvmb7k4spnj"; depends=[ChIPseeker DESeq2 dplyr edgeR fgsea GenomicRanges ggplot2 ggrepel limma pheatmap preprocessCore RColorBrewer sva TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene writexl]; }; cinaRgenesets = derive2 { name="cinaRgenesets"; version="0.1.1"; sha256="0pz3iw559d8rsxmnwd1cqcpv8qnnh9bfvc9ydzwznx8jczbldls8"; depends=[]; }; cinterpolate = derive2 { name="cinterpolate"; version="1.0.0"; sha256="1aw6hs41xin2hhgmi4pr5510v4sn6x735lachpc5gpbxch5h3f82"; depends=[]; }; - cir = derive2 { name="cir"; version="2.1.1"; sha256="12bxpbi212gvqy6gh7fb580x2rrx9v54i21s1swl7nnplmm9r1yq"; depends=[]; }; + cir = derive2 { name="cir"; version="2.2.0"; sha256="0wfv7iv1z9xcp0icjr9agrl7j6z2z3d1wp85sd5dyzp9gbfjsinm"; depends=[]; }; circacompare = derive2 { name="circacompare"; version="0.1.1"; sha256="15vpnh20wni2wmp86xql9737kbxbi28s9a4pi3rihr1w5mcgqfaj"; depends=[ggplot2]; }; circglmbayes = derive2 { name="circglmbayes"; version="1.3.0"; sha256="0i5aacr7vqznm3rhlznc02xjzjkjliadxhhvsmf8wb2cvivz0wir"; depends=[BH coda ggplot2 Rcpp RcppArmadillo reshape2 shiny]; }; circle = derive2 { name="circle"; version="0.7.1"; sha256="04gb3575sdlhh5z6bkam8sj2wg9npgq0b9572qm2dlrspmjqvcd4"; depends=[cli httr jsonlite]; }; - circletyper = derive2 { name="circletyper"; version="1.0.0"; sha256="0p5qbx07zsa50kgwmxa9mzv09zv3j2dhpmwqvx51cmk72vy4yykj"; depends=[shiny]; }; - circlize = derive2 { name="circlize"; version="0.4.12"; sha256="1x2j6a80bb4fly3dm91ias964s1gb1cmzj3lyh69ikwjaam0rdmk"; depends=[colorspace GlobalOptions shape]; }; + circletyper = derive2 { name="circletyper"; version="1.0.1"; sha256="11jqcz0faxd7g50nmxa58c3gyaysvzcrgh6yalpxapz06md17wq5"; depends=[shiny]; }; + circlize = derive2 { name="circlize"; version="0.4.13"; sha256="16rnqlkgzhnm69y70k9fiz8vvwlm5dyng04hlxqvvaxix3wdpfkc"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; circularEV = derive2 { name="circularEV"; version="0.1.0"; sha256="03qr0sfiqpz0zvm9xihwi07snhxkj5h6bcsxhrsr89xyb70wqwg0"; depends=[circular doParallel foreach ggplot2 mgcv NPCirc]; }; - circumplex = derive2 { name="circumplex"; version="0.3.6"; sha256="1b5brqhya8jzxhr4zjmr6660w9mzfyncpdknzpvkdhc149s1ksjd"; depends=[assertthat boot dplyr ggforce ggplot2 glue htmlTable magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; + circumplex = derive2 { name="circumplex"; version="0.3.8"; sha256="1c6h06ccsql3yy3304b537wl40wd8f0sgj3gwi376irfz5zq227j"; depends=[assertthat boot dplyr ggforce ggplot2 htmlTable magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; + cit = derive2 { name="cit"; version="2.3.1"; sha256="1i1179d0rjnmrlwh031dxmvwp2w6k1c9fj5g3cfmzjk4xxb2bjha"; depends=[]; }; citation = derive2 { name="citation"; version="0.4.1"; sha256="050dx029kz37rjmgcbik7rpa34bhhr81lrrsi17v50cy3nkr83x2"; depends=[desc jsonlite yaml]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; citecorp = derive2 { name="citecorp"; version="0.3.0"; sha256="0lqxa6qfysrk3rpg9fnsxhrfsd0qsbfxhc3b43090fhlxq9gk3wm"; depends=[crul data_table fauxpas jsonlite]; }; - ciu = derive2 { name="ciu"; version="0.1.0"; sha256="04fshss0klib74dr997p8kmv9mgbxnkanl8x24x6aild2nv25lz4"; depends=[ggplot2 Rcpp]; }; + ciu = derive2 { name="ciu"; version="0.5.0"; sha256="01fg5awbf35qparry0z3kl60kww8rbaqgi2b81vmbl77bls0my7l"; depends=[crayon ggplot2 Rcpp]; }; ciuupi = derive2 { name="ciuupi"; version="1.1.0"; sha256="0czfmmf62p1vml24s87pdwv52spqycchpkqzwk8vyd4n1z27r5s2"; depends=[functional nloptr pracma statmod]; }; ciuupi2 = derive2 { name="ciuupi2"; version="1.0.1"; sha256="04x02qmqqyrc4h4z4mpl4zn5vr9y28k6j6n30fbr9q238zd543db"; depends=[functional nloptr pracma PreciseSums statmod]; }; civis = derive2 { name="civis"; version="3.0.0"; sha256="12q96bj21832zqqbisfxmnpqw7w72v350lyf7cpjgr7cq7b51brd"; depends=[future httr jsonlite memoise]; }; + cjbart = derive2 { name="cjbart"; version="0.1.0"; sha256="1lpqwm6py0xwmcj87crk9ivd96wy3kzfhkinv064d6dx5n4m4fax"; depends=[BART ggplot2 rlang tidyr]; }; cjoint = derive2 { name="cjoint"; version="2.1.0"; sha256="1bs380ji9vsc1d77wqhl0ij9xblww3g9x3hiwpcpz26wihqcx7ac"; depends=[DT ggplot2 lmtest Matrix sandwich shiny shinyBS shinyjs survey]; }; ckanr = derive2 { name="ckanr"; version="0.6.0"; sha256="1fhyyyklfsi1zva9vg397x8p0zbnchajkjb1kcfm4f861xq60j16"; depends=[crul DBI dbplyr dplyr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.7"; sha256="18aiyjhnh5mfdxbzns4cy0r8bymfikhwkybpn4g04qhli5ls8z83"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.15.1"; sha256="0msay6yvm6wc964gwrz31ky5w4mizakji3j6rpkydz0zlrl52v1j"; depends=[Rcpp RcppArmadillo]; }; - clam = derive2 { name="clam"; version="2.3.8"; sha256="0i5slb4cldypzpwlngmj5czz5s5l9b8pahlj98g6y845gcsgjjff"; depends=[IntCal]; }; + clam = derive2 { name="clam"; version="2.4.0"; sha256="14czria38vk64pxj8jrw4yix33fgwidygqjslgyjj07xfmwsdf1v"; depends=[IntCal]; }; clampSeg = derive2 { name="clampSeg"; version="1.1-0"; sha256="1138wphhmf5hn5yh8p1fwix4lf2yncbc7xxcnnv2xz1z8b041qhs"; depends=[lowpassFilter stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; clarkeTest = derive2 { name="clarkeTest"; version="0.1.0"; sha256="0vbb3j9rnh42qyp78a4jykp7p560d0ryfp28xgvxax8h8hr80457"; depends=[]; }; @@ -6780,30 +7041,32 @@ in with self; { classInt = derive2 { name="classInt"; version="0.4-3"; sha256="1b1lqhpzxm6b8pza8l3s0cxy74mm9y45lcd3354i2v3bg8m7mply"; depends=[class e1071 KernSmooth]; }; classifierplots = derive2 { name="classifierplots"; version="1.4.0"; sha256="0agxm3vrbs8lqhk1xvfc3wzf0q0hxhgyp23j5qi5mi1drgnw1jj1"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; + classmap = derive2 { name="classmap"; version="1.1.1"; sha256="0zr9yp21g8xyn1km9lrb9sydslkg86zpw06k65y7ly11liiv6gfc"; depends=[cellWise cluster e1071 ggplot2 gridExtra kernlab randomForest robustbase rpart]; }; cld2 = derive2 { name="cld2"; version="1.2.1"; sha256="01p64r2ij1i0xm3835vfnpxmmbnnaigp0md9x1hrq8gfsdwnzv3x"; depends=[Rcpp]; }; - cld3 = derive2 { name="cld3"; version="1.4.1"; sha256="1ag93ascv98nvhp2waklrzgsx2kq9z0p7p12c9446qmgjsirimx2"; depends=[Rcpp]; }; + cld3 = derive2 { name="cld3"; version="1.4.2"; sha256="1f276kpg5ir1dmaacii55zb05d9r11995zv70lzrs4jn3q2h3qn6"; depends=[Rcpp]; }; clda = derive2 { name="clda"; version="0.1"; sha256="03zfanvpz1h42h2z38a63fck1p5hqig4w2svknzpw7mryji5q9b1"; depends=[MASS]; }; clean = derive2 { name="clean"; version="2.0.0"; sha256="0zvk3a5yz54g2mn7y1d91z6ljglbyq1hkh4iip1dfyi15chrqv7y"; depends=[cleaner]; }; cleanNLP = derive2 { name="cleanNLP"; version="3.0.3"; sha256="0bc0ya36yhknqhqc76yf9clgiacyb6zypzirzg6i0213bqw2ihdp"; depends=[Matrix reticulate stringi udpipe]; }; + cleanTS = derive2 { name="cleanTS"; version="0.1.0"; sha256="0axrc6ax2d37mlx2cix9jbk9j2ksa86g074w70lymvl40f0zaz41"; depends=[anomalize data_table gganimate ggplot2 ggtext glue imputeTestbench imputeTS lubridate shiny stringr tibble tibbletime transformr]; }; cleancall = derive2 { name="cleancall"; version="0.1.1"; sha256="1gq7bjywgslybfk97k3fxglp6j78a0cklaammccvffs3b94i4zh4"; depends=[]; }; cleandata = derive2 { name="cleandata"; version="0.3.0"; sha256="1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk"; depends=[]; }; - cleaner = derive2 { name="cleaner"; version="1.5.1"; sha256="0qmg9c299bcrwl1r1hhl56rf0sm6sbqgssrk72him4090j6gslyr"; depends=[backports crayon knitr pillar rlang vctrs]; }; + cleaner = derive2 { name="cleaner"; version="1.5.3"; sha256="0glrymsfqh3lq9n0xr202i30jm6lqwgcj0r8czy0a3066qh7hjbm"; depends=[backports crayon knitr pillar rlang vctrs]; }; cleanerR = derive2 { name="cleanerR"; version="0.1.1"; sha256="0rghn8rx7dj5clmc1dqvqwfm9kiva04k9gxsjjga3109l4jcpg63"; depends=[data_table plyr]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-4"; sha256="0yynf5d2lbz6329brzcnjm91rg6is60h2xlavz73lfxx3v549dy3"; depends=[maptools rgeos sp]; }; - cleanr = derive2 { name="cleanr"; version="1.3.1"; sha256="00h6kqsz9f6k2ngcpqzfqpp14c5a6x5f7ghmdnvi2nwyqipzk6xi"; depends=[checkmate pkgload rprojroot]; }; + cleanr = derive2 { name="cleanr"; version="1.3.3"; sha256="1vd50zb12s1379ln2zpg9acz50vw6xdhi11sy2zff3vpxdxly22f"; depends=[checkmate fritools pkgload rprojroot]; }; clere = derive2 { name="clere"; version="1.2.0"; sha256="0qc26ycycxphrbksk7jb1m6vh66a2zsnw8k4jnazs23sqdg24im9"; depends=[Rcpp RcppEigen]; }; clespr = derive2 { name="clespr"; version="1.1.2"; sha256="1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g"; depends=[AER clordr doParallel foreach magic MASS pbivnorm survival]; }; clevr = derive2 { name="clevr"; version="0.1.1"; sha256="077qhqfzcy1ciar70df7q98ms003b9mnqgji1nxkx5ncw9hdkzd4"; depends=[BH Matrix Rcpp]; }; - clhs = derive2 { name="clhs"; version="0.7-3"; sha256="19v617dayirbzb5w6mz79lsjinvr2jjlwdm61pd2pppk099fxgqr"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; - cli = derive2 { name="cli"; version="2.5.0"; sha256="174dnlcl0i21rbs0z4as0v9iic60bs4z88152ibjljva0nzdyrsh"; depends=[glue]; }; + clhs = derive2 { name="clhs"; version="0.8.1"; sha256="1yrm52sljwd9nr4aw79v7f9fn2r013wfngszd2gh7mfk3hz0i06j"; depends=[cluster ggplot2 plyr raster reshape2 sf sp]; }; + cli = derive2 { name="cli"; version="3.0.1"; sha256="1zdld2cr83k4v7yrwa2csvcafwslwr610vk70mv1a3knrnv2b6nq"; depends=[glue]; }; cliapp = derive2 { name="cliapp"; version="0.1.1"; sha256="0v62lbcsja0xmlpqcps370n5c7bk4j2n8pwh9xyif5s4wpf82qz1"; depends=[cli crayon fansi glue prettycode progress R6 selectr withr xml2]; }; - clickR = derive2 { name="clickR"; version="0.7.35"; sha256="0icvn6q6ii4kv5xyxi61x9zlchx0h72v8csfx64x7mxsgi9w1bam"; depends=[beeswarm stringdist]; }; + clickR = derive2 { name="clickR"; version="0.8.0"; sha256="0j8hl5cgdm4j4h3x3h7fp6w3xr8p350icvmf123z56f6fkj6c22z"; depends=[beeswarm stringdist]; }; clickstream = derive2 { name="clickstream"; version="1.3.1"; sha256="0z1yy5lr9m5x9ybimjy3f6kn490abdi038xi0qw7ny80f1ca6ry7"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; clifford = derive2 { name="clifford"; version="1.0-2"; sha256="17br7p4zj1cjf1nbwbk0a2jjxj589qgvlnzi6yp4dqlf2g0w01z6"; depends=[BH Rcpp]; }; - clifro = derive2 { name="clifro"; version="3.2-3"; sha256="151j8v6d0wr5np5i8wb7b1k398cg2fz6yndpz8r0rh2d3yx5544l"; depends=[ggplot2 lubridate magrittr RColorBrewer RCurl reshape2 rvest scales xml2]; }; + clifro = derive2 { name="clifro"; version="3.2-5"; sha256="1p2xy5r9axkj8yk6ywaq0w5i00bdfm15drjz227nx8p4vd3q6si8"; depends=[ggplot2 httr lubridate magrittr RColorBrewer reshape2 rvest scales stringr xml2]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; - climaemet = derive2 { name="climaemet"; version="0.2.0"; sha256="0jhyf0wrq5scs8jcn2bpl8fhlimhdkd39pxzdc26zwwya5683cas"; depends=[climatol dplyr gganimate ggplot2 ggpubr ggthemes gtable httr jpeg jsonlite lubridate magrittr RColorBrewer rlang scales stringr tibble tidyr]; }; - climate = derive2 { name="climate"; version="1.0.1"; sha256="16r0463wbdgd5pycmk0hybr70ysql10ijx2ixszs98xndi259yj7"; depends=[curl data_table httr XML]; }; + climaemet = derive2 { name="climaemet"; version="1.0.0"; sha256="19i89274m7ybnlzgm5bgw6nwiwicc3fd2clmgiqklr23sq8zvn6w"; depends=[dplyr ggplot2 httr jsonlite lubridate rappdirs readr rlang tibble tidyr]; }; + climate = derive2 { name="climate"; version="1.0.3"; sha256="0wdns4zndnc4k2f6k22imr85glld9lsg3l43cprn0r8vcnzlhn08"; depends=[curl data_table httr XML]; }; climateStability = derive2 { name="climateStability"; version="0.1.3"; sha256="1zag722sznr22xid2v1k4a9sh3sr3grfa3wwd2m943zpvyi1sk9a"; depends=[raster]; }; climatol = derive2 { name="climatol"; version="3.1.2"; sha256="0p3nk4n7izj0cmmqd9apa1gix5lfdzp08ydy0n7rkl5kbkmrkb6n"; depends=[mapdata maps]; }; climatrends = derive2 { name="climatrends"; version="0.1.7"; sha256="0dj095jafl571hvf2bp21mdbp2pln0li9bgpymzjbpnbkvn8309j"; depends=[]; }; @@ -6812,22 +7075,28 @@ in with self; { climextRemes = derive2 { name="climextRemes"; version="0.2.2"; sha256="04ra2xqkf9zg7hbmb5ycfql9nwkabxy8412d05ajshld4cr0gi45"; depends=[boot extRemes]; }; climwin = derive2 { name="climwin"; version="1.2.3"; sha256="1r2x5941k8l9z3517389y120sfhrskdpchc0pkibznza8aa95r85"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv RcppRoll reshape]; }; clinDR = derive2 { name="clinDR"; version="2.3.5"; sha256="0p5pq0kpm8sfxv1a1dp2wyykp1qqbxbjz0c4f20igc25aazd7kaz"; depends=[doParallel DoseFinding dplyr foreach ggplot2 glue magrittr purrr rstan shiny tibble tidyr waiter]; }; + clinDataReview = derive2 { name="clinDataReview"; version="1.1.0"; sha256="0yy3hwg77xcvinnrqfdpsrv1ld1725h0dfnih27jgq30ykcb0ji9"; depends=[bookdown clinUtils crosstalk data_table ggplot2 haven htmltools htmlwidgets jsonlite jsonvalidate knitr plotly plyr rmarkdown stringr yaml]; }; clinPK = derive2 { name="clinPK"; version="0.9.0"; sha256="1n1m8szd8mxdshwz8l3hfdxi7zrmsah46kxkv7jiffwnfhijfhsm"; depends=[curl testit]; }; clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; }; + clinUtils = derive2 { name="clinUtils"; version="0.1.0"; sha256="1sd71jxb0h69kpqj0606v4km2m28acqc8a5d4nhvr97l7isdm9lv"; depends=[crosstalk data_table DT haven htmlwidgets knitr plyr viridisLite]; }; clinfun = derive2 { name="clinfun"; version="1.0.15"; sha256="0cv1kdxj911scri82ms21lk9frsdp4251fawdsbqinby7k6hhmkc"; depends=[mvtnorm]; }; clinmon = derive2 { name="clinmon"; version="0.6.0"; sha256="0cd5mrirfll0zbm9k8glwdqnh4qy4dlfnsypr3xhyf6ppgm35hlv"; depends=[signal]; }; clinsig = derive2 { name="clinsig"; version="1.2"; sha256="1wgfl9kks57yizrf8z6x7dhmbl3a80q8nnj3a5n2hpc9yr8l9ijf"; depends=[]; }; clinspacy = derive2 { name="clinspacy"; version="1.0.2"; sha256="134nvkircy1a1rmsg2nszk2r8bcdmikmrx6plchdz8gxyjd6jmya"; depends=[assertthat data_table magrittr rappdirs reticulate]; }; - clipp = derive2 { name="clipp"; version="0.1.0"; sha256="0phh2nbpfb5p80ijll4h9j2hy4syl8802a2lhlm5grirws1iif84"; depends=[]; }; + clintools = derive2 { name="clintools"; version="0.8.5"; sha256="0prrzs18sscna37nv5kxwczdy9jk9xxib1myi1fnxvincrhczmrj"; depends=[signal xml2]; }; + clipp = derive2 { name="clipp"; version="1.1.0"; sha256="1mh3rhkjm13yp1890d7zy2qn50nv177z74kr4pgnp5i7vlr8zqr6"; depends=[]; }; clipr = derive2 { name="clipr"; version="0.7.1"; sha256="1ywa4kipwc2d7na6iiz3wzdah99h6aynnh74yxl3nzl40xxlgbgz"; depends=[]; }; clisymbols = derive2 { name="clisymbols"; version="1.2.0"; sha256="1q7gi2zmykhzas9v8fdnbpdq7pzdcpbhim1yxvd2062l777g4j86"; depends=[]; }; - clock = derive2 { name="clock"; version="0.3.0"; sha256="1yg16g2rnxm3ad1kqf3vrpmxm8zh08ipik0dvx7p3q6djmfm6y53"; depends=[cpp11 ellipsis rlang tzdb vctrs]; }; + clock = derive2 { name="clock"; version="0.4.1"; sha256="18bjcsb4kdxk8gmx2f6s66azrhspa0sv71sqim4998mw5xzr2c34"; depends=[cpp11 ellipsis rlang tzdb vctrs]; }; + clockify = derive2 { name="clockify"; version="0.0.9"; sha256="1m8jpafraycb85g7z4nna3isjyd5vfacbrxwpgn9745rbkg5iwly"; depends=[anytime dplyr httr janitor logger lubridate purrr tibble tidyr]; }; clogitL1 = derive2 { name="clogitL1"; version="1.5"; sha256="0y6a6s5l98i0vrj66biwr17g6pzpmm5kfz4c57af0yhv7c4s4was"; depends=[Rcpp]; }; clogitLasso = derive2 { name="clogitLasso"; version="1.1"; sha256="1j2kscd6d1jham6yqx5rp78x5vfj2faylkxkbcjaqbynlnqbbxd0"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; clordr = derive2 { name="clordr"; version="1.6.0"; sha256="1w9km87wndr4fssfn7c9g2sy5lnk1ik0sqqwqyas7qc2h48la4di"; depends=[doParallel foreach MASS pbivnorm rootSolve tmvmixnorm ttutils]; }; cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; cloudml = derive2 { name="cloudml"; version="0.6.1"; sha256="1j15q9yb2rc4fbjxfh21fiq6is8dnb8nfyi7g8iazgfwb3p9ahpx"; depends=[config jsonlite packrat processx rprojroot rstudioapi tfruns withr yaml]; }; + cloudos = derive2 { name="cloudos"; version="0.2.0"; sha256="0n0ldg81k6i0wqnzzimkr7pyi2q705g9hia4ckf1cp2sskgrfvj0"; depends=[dplyr ggplot2 httr jsonlite rappdirs tibble]; }; + cloudstoR = derive2 { name="cloudstoR"; version="0.1.0"; sha256="0bcdm3qp1bcgb7wksvjisd7m629cqbdvf8779gmlqi3w5daw4lpq"; depends=[cli curl getPass httr keyring rio XML]; }; clpAPI = derive2 { name="clpAPI"; version="1.3.0"; sha256="1ivrvipnvnqf1mnvvqnv2jgf69i0h84f46n8x41bx89lag0161bv"; depends=[]; }; clr = derive2 { name="clr"; version="0.1.2"; sha256="088ks9lrhlyvg3yvlfmb0091yp6qp5bzg9h5r6ryv3bk6y56sajx"; depends=[dplyr lubridate magrittr]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; @@ -6835,12 +7104,12 @@ in with self; { clue = derive2 { name="clue"; version="0.3-59"; sha256="0ychvjbqkcgqdp5gy4hsi4297phywd7fj89y3yi5ckmnmjb39kjm"; depends=[cluster]; }; clusTransition = derive2 { name="clusTransition"; version="1.0"; sha256="0q5cxkb5mrygyp2zg177rwn5cgpnyqln7yjvjflb48ll3jr98342"; depends=[flexclust]; }; cluscov = derive2 { name="cluscov"; version="1.1.0"; sha256="0345v5r6b53243h5bir29v0w77pmwjqjkqfrjnk5j5r1wbh98q1w"; depends=[MASS quantreg]; }; - clusrank = derive2 { name="clusrank"; version="1.0-0"; sha256="1ph7rn5cqv67nspadlm8j2vlwvn9c8n0h9qr90003jn0kwz8dic4"; depends=[MASS Rcpp]; }; + clusrank = derive2 { name="clusrank"; version="1.0-1"; sha256="05zapv3rsil98rw59yakyszladifd7snknaz9k6g501jkpi79qcf"; depends=[MASS Rcpp]; }; clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; }; clustDRM = derive2 { name="clustDRM"; version="0.1-0"; sha256="1c5z08a15scp3nrwyh0c03pdaawvm3ivbygqpbglwxim7zf73rd2"; depends=[caret doParallel DoseFinding DT foreach IsoGene MCPMod multcomp ORCME ORIClust pheatmap RColorBrewer readr shiny]; }; clustEff = derive2 { name="clustEff"; version="0.2.0"; sha256="0kh3jzzqnchkgp0w1pz2sjxr215lyjh62v5857g94h91h5kn70y6"; depends=[cluster fda ggplot2 ggpubr qrcm]; }; clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; - clustMixType = derive2 { name="clustMixType"; version="0.2-11"; sha256="0xriq0flzwf9kvlkl95d253fc1ahwvc8qghiqma77wimg3kxkxak"; depends=[RColorBrewer tibble]; }; + clustMixType = derive2 { name="clustMixType"; version="0.2-15"; sha256="1m43xhqc7jcdj1h5nlp0daz99s1nfss7rwwjn7qqf1hvscblyp3s"; depends=[RColorBrewer tibble]; }; clustcurv = derive2 { name="clustcurv"; version="2.0.1"; sha256="1xkl84pd1a3phl5yfm21yr5c0gbmmg1wk9b0lyl2x8466v5hl53q"; depends=[doParallel doRNG foreach ggfortify ggplot2 Gmedian npregfast RColorBrewer survival]; }; cluster = derive2 { name="cluster"; version="2.1.2"; sha256="168l653ygkg21fwrqrf7lsqi5p6jzhgmcvhrwv7lznkdzdhag2jw"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; @@ -6858,47 +7127,44 @@ in with self; { clustermole = derive2 { name="clustermole"; version="1.1.0"; sha256="15v3fspp82z7vh5f1ym89mrmajl8b7qymwr1fqa6kfi982dzhrar"; depends=[dplyr GSEABase GSVA magrittr rlang singscore tibble tidyr]; }; clustermq = derive2 { name="clustermq"; version="0.8.95.1"; sha256="1777c1xg15p6dm5grz64yd35nbhmj914dyxpymv6hl25g740c2ky"; depends=[narray progress purrr R6 Rcpp]; }; clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; - clusternor = derive2 { name="clusternor"; version="0.0-4"; sha256="19ac45jn9lkd600nnaib2f0ricdvh0dv3l1ap6c9vn655rgl9i3s"; depends=[Rcpp]; }; clustertend = derive2 { name="clustertend"; version="1.5"; sha256="194acf2pd71jxyyjj7ri9mpnx094zziwmq6w9lfclifrnkqv6ra9"; depends=[]; }; - clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; clustrd = derive2 { name="clustrd"; version="1.3.7-2"; sha256="0j0nmqc9q9djg824g89z27xizdy1jdsygz1gc0r0mrzdd3dyk2ya"; depends=[ca cluster corpcor dplyr fpc GGally ggplot2 ggrepel plyr rARPACK tibble]; }; clustree = derive2 { name="clustree"; version="0.4.3"; sha256="0lxydy2f83qqd5dhlp2l546jax759l43b29j6g82079yzg1szwsz"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; clustringr = derive2 { name="clustringr"; version="1.0"; sha256="07f0ywpkf8igic7ijvvrjlngq3smjcv9nqnah41fp6wfgvh49ifq"; depends=[assertthat dplyr forcats ggplot2 ggraph igraph magrittr rlang stringdist stringi stringr tidygraph]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; clustvarsel = derive2 { name="clustvarsel"; version="2.3.4"; sha256="0hzvfcjs1k13j695jx6m0fgmcxy284gp4d59b7zmnvqib153x89x"; depends=[BMA foreach iterators Matrix mclust]; }; clv = derive2 { name="clv"; version="0.3-2.2"; sha256="072jn3xh6ii7vfp0gx03k1hiafnla1lkyn5hpj17nmqc0jvzp683"; depends=[class cluster]; }; - cmR = derive2 { name="cmR"; version="1.0.1"; sha256="1zhgab0laxhjmqiycsbh30f45kqch528mf4zdjlrklimv95wfc2r"; depends=[fields Matrix]; }; + cmR = derive2 { name="cmR"; version="1.0.3"; sha256="0ml7ip9zxljpgzksbxd15q890q062nf0q81d272dhiizxvr4a0cn"; depends=[fields Matrix]; }; cmaRs = derive2 { name="cmaRs"; version="0.1.0"; sha256="08fq9qfgx812d5m0m4amq2k0w5w2cbv7ljpfgjwdqhshix3dxvis"; depends=[AUC earth Matrix Rmosek Ryacas0 stringr]; }; cmaes = derive2 { name="cmaes"; version="1.0-11"; sha256="1hwf49d1m660jdngqak9pqasysmpc4jcgr8m04szwbyzyy6xrm5k"; depends=[]; }; cmaesr = derive2 { name="cmaesr"; version="1.0.3"; sha256="03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; - cmcR = derive2 { name="cmcR"; version="0.1.6"; sha256="1q56hhj2hdn9a9jx6z0cqy3b7w13ngfidwpq4vgfxfiq4axf7qzn"; depends=[assertthat dplyr ggnewscale ggplot2 imager magrittr purrr quantreg rlang scales stringr tibble tidyr x3ptools zoo]; }; cmce = derive2 { name="cmce"; version="0.1.0"; sha256="0d52ci906zbd4q43qylcyw93acxh7f20jn3r0k74ynyy47131dnd"; depends=[]; }; cmdfun = derive2 { name="cmdfun"; version="1.0.2"; sha256="1pbcq7hi2lcmqnghmy3q2fsk0c9fy5m0637acyzmc096fxbx723j"; depends=[magrittr purrr R_utils rlang testthat usethis]; }; cmenet = derive2 { name="cmenet"; version="0.1.1"; sha256="0f7bci6nn63q243i7wvhr9mqlf64gw8w042nc1lqb986p7zfxihk"; depends=[glmnet hierNet MASS Rcpp RcppArmadillo sparsenet]; }; - cmfrec = derive2 { name="cmfrec"; version="2.4.5"; sha256="1lq1ji1l5arnydmql49ifffk8im76f30pzmhwmgijj9qf269j5kl"; depends=[]; }; + cmfrec = derive2 { name="cmfrec"; version="3.2.2"; sha256="0nl4fyaa79wm7nbg3rkdqffgl3isxkbnd3rbc7njfb49df9sgf80"; depends=[]; }; cmm = derive2 { name="cmm"; version="0.12"; sha256="0q6hs56hhi9vaanx7i7gg7ncv0h29lndla66g9chzmh3lchq3r20"; depends=[]; }; cmmr = derive2 { name="cmmr"; version="0.1.2"; sha256="0nik1pzd1rckalvn7xh6s699kkdjnra3q3bn5x16c1lmpz5bp2s4"; depends=[httr progress RJSONIO]; }; - cmna = derive2 { name="cmna"; version="1.0.3"; sha256="07wjjbhpd8g2gsmxh9cq2ij81qvd6y7x8zabspk9jilmxhycpxy6"; depends=[]; }; + cmna = derive2 { name="cmna"; version="1.0.5"; sha256="161qc7q88ajm3l62bq03lpf35bdii1w1d111085zvs3hrf09iybw"; depends=[]; }; cmocean = derive2 { name="cmocean"; version="0.3-1"; sha256="0y6yd3x2swx88r7kv6f9lrbf3zzawhf2x8izszgg4zb21pkal6k8"; depends=[]; }; cmprsk = derive2 { name="cmprsk"; version="2.2-10"; sha256="1xnx2zanw548prxsw2zw5cddkkg6kj97jgyzw67achq5mnsvfbg8"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.2"; sha256="1b3di5fsgglriv00fxydpc4p8lh0xcgi6jc04awq2vmp6s8kvjmw"; depends=[quantreg survival]; }; - cmprskcoxmsm = derive2 { name="cmprskcoxmsm"; version="0.2.0"; sha256="0xqgvqwp1777mpxg839mqwmphykxd58b0znp2hqdfphvd5315vi2"; depends=[ggplot2 sandwich survival twang]; }; + cmprskcoxmsm = derive2 { name="cmprskcoxmsm"; version="0.2.1"; sha256="1q17nzvqv0c8p2fs34fqszllp6g7kdbsmw4frlxpbjr3gwgd8rlk"; depends=[ggplot2 sandwich survival twang]; }; cmrutils = derive2 { name="cmrutils"; version="1.3.1"; sha256="0nrq84bkd23lvvg8ls2smkjcnfnydhbcni3n6s8w0579i9xga8dv"; depends=[chron]; }; cms = derive2 { name="cms"; version="0.1.0"; sha256="0m3cxvw40nyr1jpdkhg5nbms16hkzj0mrx5nl39x1l42cx2hcjrl"; depends=[assertthat dplyr magrittr readr rlang rvest xml2]; }; - cmsaf = derive2 { name="cmsaf"; version="3.1.0"; sha256="1q1nx520k3h6063fnn489xlr2dk4lbqpvvmrzfnrc4f7vispni91"; depends=[cmsafops cmsafvis colorspace colourpicker data_table fields FNN mapproj maps maptools ncdf4 R_utils raster rworldxtra SearchTrees shiny shinyFiles shinyjs shinythemes sp]; }; - cmsafops = derive2 { name="cmsafops"; version="1.1.1"; sha256="0j4yvxzy9k1w4jaxzf10xrwv4s92lxnib4xzjsi07as65pad97x0"; depends=[assertthat fields FNN ncdf4 progress rainfarmr raster SearchTrees sp trend]; }; - cmsafvis = derive2 { name="cmsafvis"; version="1.1.1"; sha256="0vyxn9vm8ysypahvcqqxh4z0xx887871z1si8193p40xs1lahy2v"; depends=[animation assertthat cmsafops colorspace countrycode fields gridExtra mapproj maps maptools ncdf4 png progress raster rasterVis RColorBrewer rgdal rworldxtra SearchTrees sp yaml]; }; - cmstatr = derive2 { name="cmstatr"; version="0.8.0"; sha256="1afqr87n4pzhiq9skawjcicw28l5554c7807yrdlg32h8bj7mjfp"; depends=[dplyr generics ggplot2 kSamples MASS rlang tibble]; }; + cmsaf = derive2 { name="cmsaf"; version="3.2.0"; sha256="0k9n6qa9sndma8qqz29y6ql8lgl2dlqx3ksyadr9a2sy21mi1gqc"; depends=[cmsafops cmsafvis colorspace colourpicker data_table fields FNN mapproj maps maptools ncdf4 R_utils raster rworldxtra SearchTrees shiny shinyFiles shinyjs shinythemes sp]; }; + cmsafops = derive2 { name="cmsafops"; version="1.2.0"; sha256="1jcbq3xp04d2cf722c6ii0c49iyl3igxv2h5wv079cnalgk2vvfr"; depends=[assertthat fields FNN ncdf4 progress rainfarmr raster SearchTrees sp trend]; }; + cmsafvis = derive2 { name="cmsafvis"; version="1.1.5"; sha256="0iih597z4iq956hvg45nfr3xlvclyb85jvkynz4rh2wqasy5zwrz"; depends=[animation assertthat cmsafops colorspace countrycode fields gridExtra mapproj maps maptools ncdf4 png progress raster rasterVis RColorBrewer rgdal rworldxtra SearchTrees sp yaml]; }; + cmstatr = derive2 { name="cmstatr"; version="0.9.0"; sha256="1bgv7mai5mj6rdxlwmd5m7jzvw69qnsbzdj04zp767jp1gqigf7x"; depends=[dplyr generics ggplot2 kSamples MASS purrr rlang tibble]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-6"; sha256="1wf23w9gxrrgw7j740r381xrss09inzd7mrg6g7wz883c9madbfn"; depends=[elliptic emulator]; }; - cna = derive2 { name="cna"; version="3.0.1"; sha256="0hhx3gzd8sjy3l6fx9ylbz171w5xg381al0ccrsp31q2l67d5ls5"; depends=[car Matrix matrixStats Rcpp]; }; - cnaOpt = derive2 { name="cnaOpt"; version="0.2.0"; sha256="0zm442nbbnnz47rzh57f0al21kcq0bd81g57q5b9dszf4s64japl"; depends=[cna dplyr ggplot2 matrixStats Rcpp]; }; + cna = derive2 { name="cna"; version="3.2.0"; sha256="01072i679n9pkvzcbnbqy8nrcs8lbghlf6wx17pf2shmrfvxhvcl"; depends=[car Matrix matrixStats Rcpp]; }; + cnaOpt = derive2 { name="cnaOpt"; version="0.4.0"; sha256="1hnbnvvhafafbxdl0s5s02md6gjzyhd9xgf06d3rhgaa74gdqpxx"; depends=[cna dplyr ggplot2 matrixStats Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; + cns = derive2 { name="cns"; version="0.1.0"; sha256="1kn1cq32pp05ag22n7iwjxn6lxpqn443npzk6vdskjm5pbnsc33k"; depends=[]; }; cnum = derive2 { name="cnum"; version="0.1.3"; sha256="0iphbx5ii4ij0bi9nqdz793i4gk2164jlgz5xn8yzsayjmizhdk2"; depends=[BH Rcpp stringr]; }; coRanking = derive2 { name="coRanking"; version="0.2.1"; sha256="10489vbd917mzz5lw7ygi6q8q5qa7sp5d8xgv1ykn4lfx0avch69"; depends=[]; }; - coala = derive2 { name="coala"; version="0.6.0"; sha256="0h7kc12yc90y5i733l6sfd9h12h0a2c7wv9wscjslj18sl3w3ccv"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; - coalitions = derive2 { name="coalitions"; version="0.6.18"; sha256="055m3zd3kpgz0n322y56fk2bj6x9pm37fs6x620vf2lyw0pyl6hj"; depends=[checkmate dplyr ggplot2 gtools jsonlite lubridate magrittr purrr RCurl rlang rvest stringr tibble tidyr xml2]; }; + coalitions = derive2 { name="coalitions"; version="0.6.20"; sha256="0v9345xscfdyn5qdj6ncwzbbpry942dlly91l997ba42f9j6qdjk"; depends=[checkmate dplyr ggplot2 gtools jsonlite lubridate magrittr purrr RCurl rlang rvest stringr tibble tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-5"; sha256="1k42vl49kfbllc5d66yn7y9f4jgbkfibmd85nl7hwm0gkgkssg36"; depends=[MCMCpack]; }; cobalt = derive2 { name="cobalt"; version="4.3.1"; sha256="1y7fh3lrbj5sqkqhnyl4lm7g75dld96gap95xfds70x01iq6mqk7"; depends=[backports crayon ggplot2 gridExtra gtable rlang]; }; cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; @@ -6906,17 +7172,17 @@ in with self; { coca = derive2 { name="coca"; version="1.1.0"; sha256="1lh7q3ip1jaz5zj5zcnd5whwpjw6zcrxs6j0j8mnmjsnw2kr4m5n"; depends=[caret cluster fpc glmnet Matrix nnet pheatmap RColorBrewer sparcl]; }; cocktailApp = derive2 { name="cocktailApp"; version="0.2.2"; sha256="1dfalz1psmy1h8hb8hksgr7iq05ckf22yick7syhjapprb556mik"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; - cocorresp = derive2 { name="cocorresp"; version="0.4-1"; sha256="10prxmc80yk0l5v1gcy92clmjvjywimypqpzjb6gh5pipsqr4swr"; depends=[vegan]; }; + cocorresp = derive2 { name="cocorresp"; version="0.4-3"; sha256="0lqab8f0l24hdvgnfrvvzpi969f35g5i95mq3vj7kxx0xhhz1z08"; depends=[vegan]; }; cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; }; coda = derive2 { name="coda"; version="0.19-4"; sha256="13z5dwfpnyyhpsbpg4xr9g5c1685jhqj90f4x4qkcykr6kykqba2"; depends=[lattice]; }; coda_base = derive2 { name="coda.base"; version="0.3.1"; sha256="0rz0hlhww9ja1y40yi4fah468apwp1xcnbbl1qmfggil863l5fqa"; depends=[Rcpp RcppArmadillo]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; - codalm = derive2 { name="codalm"; version="0.1.0"; sha256="0gfvq6pyqm1slj2bcla65dliffk0fc99hc7ga5142bqxmmr9bx35"; depends=[future future_apply SQUAREM]; }; + codalm = derive2 { name="codalm"; version="0.1.2"; sha256="09q7i96wga55xl8wwkb4i2sisn97wd21zqpmasykpi1aamzysqki"; depends=[future future_apply SQUAREM]; }; codeCollection = derive2 { name="codeCollection"; version="0.1.2"; sha256="0jimahw008l2x4c646dwf6f5vw9xlh8rfm7l6kgj8q4iymzbr8rm"; depends=[Epi]; }; codebook = derive2 { name="codebook"; version="0.9.2"; sha256="0hxyzwpjbvfzad8h2428q94m961mmwvv28nagw2d36qxd10awh16"; depends=[dplyr forcats ggplot2 glue haven htmltools jsonlite knitr labeling labelled likert purrr rlang rmdpartials skimr stringr tibble tidyr tidyselect vctrs]; }; codebreaker = derive2 { name="codebreaker"; version="0.0.2"; sha256="12gjaziwzzisx4j70z8k17k6i5wdsdyk542yfx04rin4ks829f34"; depends=[beepr cli]; }; - codemetar = derive2 { name="codemetar"; version="0.1.9"; sha256="096habmcncyfadly4zflydjayifklifjr4iqfpfg4hl43yq9a5q2"; depends=[cli commonmark crul desc gert gh jsonlite magrittr memoise pingr pkgbuild purrr remotes sessioninfo urltools xml2]; }; - codename = derive2 { name="codename"; version="0.1.0"; sha256="0cz1wdzrw2kzw2jigazbb4v5k1biz09vkjigfimckg9a4f8aba3j"; depends=[]; }; + codemeta = derive2 { name="codemeta"; version="0.1.0"; sha256="0bdgbx2kmyf8jcwq9m7a6paivrnqz4niiarifgdns144183klidq"; depends=[desc jsonlite]; }; + codename = derive2 { name="codename"; version="0.4.0"; sha256="196xd326ps6yqb1kr1mckfxpb076p0z4kz15cpa12w2psdwy8ba4"; depends=[]; }; codep = derive2 { name="codep"; version="0.9-1"; sha256="17jziwm56icswa4ngp51ah8w1ma7ij3cksbdaipk0ikqvb5kinkb"; depends=[]; }; coder = derive2 { name="coder"; version="0.13.5"; sha256="155rv52rxalnf8yns1p5zh590r6j1q8h38m3fk8xvqx0gyk8fbrz"; depends=[data_table decoder generics tibble]; }; codetools = derive2 { name="codetools"; version="0.2-18"; sha256="0a2c115glq8jxixwfigrpvjabhxchn9r4mc40y41dg9dg6wsd7hs"; depends=[]; }; @@ -6931,27 +7197,29 @@ in with self; { coexist = derive2 { name="coexist"; version="1.0"; sha256="15ydhrx996i6caa0360c2bgn2zvgwfg5wdhsqq1gvrggs15w7nml"; depends=[]; }; cofad = derive2 { name="cofad"; version="0.1.1"; sha256="0c27wfdk98mq0531avlgfxf2wmxcjyg39pgl9i37im7ri2s7kpnr"; depends=[]; }; cofeatureR = derive2 { name="cofeatureR"; version="1.1.1"; sha256="1awfrlnbpw9ivfvaahznx6dx5jp8ln0154vh2pznp520q59h1mbs"; depends=[dplyr ggplot2 lazyeval tibble]; }; + coffee = derive2 { name="coffee"; version="0.1.1"; sha256="06v19i6karcn9a1sminfi2k0c1zzv9m5dm8qfyqjqcbc78yvwif0"; depends=[IntCal]; }; coga = derive2 { name="coga"; version="1.1.0"; sha256="0p2mdia89gj7w0j33qxil1l2zg6civj18i3pqym7aijzz1fgwnzp"; depends=[cubature Rcpp RcppGSL]; }; cogmapr = derive2 { name="cogmapr"; version="0.9.1"; sha256="1iz776avw05a0lcna78fycixacby4bjf8ar1jazsf34yss6zka23"; depends=[car dplyr ggplot2 graph magrittr Rgraphviz tidyr]; }; cognitoR = derive2 { name="cognitoR"; version="1.0.2"; sha256="1pz4wk7vdc1nhm76kz912hyyc9c408qsldfr9dygqvran4xvqm9g"; depends=[base64enc config dplyr httr jsonlite paws shiny shinyjs yaml]; }; + cohorts = derive2 { name="cohorts"; version="1.0.0"; sha256="1v3knxnsacyf04v2dgd0g57z709279x1s8dqsja948y381p1dar9"; depends=[data_table dplyr dtplyr magrittr tibble tidyr zoo]; }; cohorttools = derive2 { name="cohorttools"; version="0.1.4"; sha256="1zpf3qgzkn34wc36r89ymzfx4fvlgl7x1yiwdwzzd20xv3nx2b5h"; depends=[cmprsk DiagrammeR DiagrammeRsvg Epi ggplot2 rsvg survival]; }; coil = derive2 { name="coil"; version="1.2.3"; sha256="023sn4waf8wb99ryxf0biag8rfg3j3sslf8fw7d00llzci8px5zj"; depends=[ape aphid seqinr]; }; coin = derive2 { name="coin"; version="1.4-1"; sha256="15xvhnbyg34aacn6jfz4bsa1f7wq2ci0hslj8mgymql90k50x1qi"; depends=[libcoin matrixStats modeltools multcomp mvtnorm survival]; }; coinmarketcapr = derive2 { name="coinmarketcapr"; version="0.3.2"; sha256="0n62kcw7yxpvxd2bzki432cis5rvfw8b8syfvgv5wpq53bavq3px"; depends=[cli crayon curl data_table ggplot2 jsonlite]; }; cointReg = derive2 { name="cointReg"; version="0.2.0"; sha256="0n4s809avhlrmrjdqzc2s752m7x96c4432gnjd4qv77r2nns7dw4"; depends=[checkmate MASS matrixStats]; }; cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; - cold = derive2 { name="cold"; version="2.0-1"; sha256="143zmccaiijz4cfiwh1a48h95bqa0ypa9ivv43qkx9y55911a05x"; depends=[cubature MASS]; }; + cold = derive2 { name="cold"; version="2.0-3"; sha256="1y2l1v7s1v3m4nhlnl72n075h53vm93vxmfn4b6269n690wl9s6d"; depends=[cubature MASS]; }; colf = derive2 { name="colf"; version="0.1.3"; sha256="1av82yrp6csw7700ymipd02j73cmzn0apv7ykachjw09nzk86kvj"; depends=[nlsr]; }; collUtils = derive2 { name="collUtils"; version="1.0.5"; sha256="0gbk3lrb2lwq2ixrpcngng6qz6axjb4iyqy5606x1zmjm71c060p"; depends=[Rcpp rJava]; }; - collapse = derive2 { name="collapse"; version="1.5.3"; sha256="18sx6m2d0kykycfbnx4nq1rpcv7yxii165fzgyf404npilddzdnd"; depends=[Rcpp]; }; + collapse = derive2 { name="collapse"; version="1.6.5"; sha256="0ijsp4azblyvgryx94ymfzcc6d5f3g794z8yv3amxsxmc8x2l8qy"; depends=[Rcpp]; }; collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.7"; sha256="0b65pbp1wnpsrayqi630ds4r98jvcvynnlp6wxdqrnnr9nzw5343"; depends=[data_tree htmlwidgets]; }; collectArgs = derive2 { name="collectArgs"; version="0.4.0"; sha256="0fz5w1xsxiddzrwahrg50px4igyhd4plq655jaix6grancs7kvix"; depends=[magrittr]; }; collections = derive2 { name="collections"; version="0.3.5"; sha256="053ig88pva78wxxwya3v7cz853k563dkpgxrf2xvd0l0d9fanxmz"; depends=[]; }; collidr = derive2 { name="collidr"; version="0.1.3"; sha256="18ki8mwf5ihbgfbhdbbk9ljs44js3rqgl1g6g3ch6dynz61sr6hn"; depends=[dplyr jsonlite stringr]; }; collin = derive2 { name="collin"; version="0.0.1"; sha256="08yg1gdp04l5rxkyvm784n2iqszgb4rlsv3b46n5bzwr334nmsav"; depends=[dlnm MASS mgcv nlme VGAM]; }; - collpcm = derive2 { name="collpcm"; version="1.1"; sha256="14rlipdww5sm1ijp2ggpnd23m14qh10zm99cfq1w0kky9jfl0fkn"; depends=[latentnet network vegan]; }; + collpcm = derive2 { name="collpcm"; version="1.2"; sha256="0v7a6mjchkahmxyf68ii051s1hvarb6knkmnhq5lfw8n4bdxh39x"; depends=[gtools latentnet network]; }; colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; - coloc = derive2 { name="coloc"; version="3.2-1"; sha256="0sm2mji8bihvcshkh9g18sgbwznhh8j4hip50rk7ckac3vc8y75h"; depends=[BMA data_table ggplot2 reshape snpStats]; }; + coloc = derive2 { name="coloc"; version="5.1.0"; sha256="1sxcav8z988x40883qayylvzg9wrnh84x6vv7r8jc1jxyk76abws"; depends=[data_table ggplot2 susieR viridis]; }; colocalization = derive2 { name="colocalization"; version="1.0.2"; sha256="0jrrh9nxjl3261rp1fnjfnydpxwpi7v0d20kzd0xc6awf52gydbb"; depends=[ggplot2]; }; colocalized = derive2 { name="colocalized"; version="0.2.0"; sha256="1q98wfqk0p9p92jgjf8liamz6grzwy6h57k7681fm07wfnyr268g"; depends=[doParallel foreach purrr]; }; colocr = derive2 { name="colocr"; version="0.1.1"; sha256="0ijykza6fdmwbr5zbyfjf382anrxh0lb9hlallyawfi6z076fv7j"; depends=[imager magick magrittr scales shiny]; }; @@ -6959,31 +7227,35 @@ in with self; { colorDF = derive2 { name="colorDF"; version="0.1.4"; sha256="1q1xfa0h7mbihbv1bpw94rsh6mp4l2v2d2spqwh6r3iy0hf9yk1c"; depends=[crayon purrr]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; colorSpec = derive2 { name="colorSpec"; version="1.2-1"; sha256="1y6wq4g4rf2carqi387v94502nb5jmw7f6f7grbdzbkixs77bkg2"; depends=[MASS spacesXYZ]; }; + colorblindcheck = derive2 { name="colorblindcheck"; version="1.0.0"; sha256="17bcnjzpnb0a0fw27y5slrakdg0p4mzhcj8684622ljinszvdz58"; depends=[colorspace spacesXYZ]; }; colordistance = derive2 { name="colordistance"; version="1.1.2"; sha256="14j63anmf4j1lmcd7nyr9k7alhycdkrr5yiar262j8wha68f245n"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png qpdf scales scatterplot3d spatstat_geom]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; colorednoise = derive2 { name="colorednoise"; version="1.1.0"; sha256="0x6l9civgqr6lbvdxnhzm30ykx9i6k1q3n6skhnq9b6b52zwrcx4"; depends=[data_table purrr Rcpp RcppArmadillo]; }; colorfindr = derive2 { name="colorfindr"; version="0.1.4"; sha256="175h476dzq1f2x25vdd268xj4ja4lv8fhfj9vld85waqi0sq515g"; depends=[bmp dplyr jpeg magrittr pixmap plotly plotwidgets png purrr rsvg stringr tibble tiff treemap]; }; colorfulVennPlot = derive2 { name="colorfulVennPlot"; version="2.4"; sha256="01b3c060fbnap78h9kh21v3zav547ak2crdkvraynpd2096yk51w"; depends=[]; }; colorhcplot = derive2 { name="colorhcplot"; version="1.3.1"; sha256="009pyyb30kwshldd7v7zfy5rxys6i0dhlc5w8ail61acbg4rlrmz"; depends=[]; }; + colorhex = derive2 { name="colorhex"; version="0.1.1"; sha256="0qkn8zyyvxmydnv1cy8wfhv05bnc7mdxa0z3zmqsffvjl4nddyp2"; depends=[ggplot2 rvest xml2]; }; colorist = derive2 { name="colorist"; version="0.1.2"; sha256="0vakfv8rq0l55qzb8cj78zbyvcrh9j7ixjap95d144g3b617h6x3"; depends=[colorspace ggplot2 magrittr raster scales tidyr]; }; colorizer = derive2 { name="colorizer"; version="0.1.0"; sha256="1c0rgjxzjwkaxdnkmcgn9f0mmcxna724cq60q79hzjindbl4r6bk"; depends=[dplyr httr magick magrittr purrr stringr tibble]; }; colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; }; colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; }; colorr = derive2 { name="colorr"; version="1.0.0"; sha256="1wwrgb9fc9gzxxwxrdrkwwrmhqqllv29wr4q8y1shj9d3nzcpwmh"; depends=[]; }; colorscience = derive2 { name="colorscience"; version="1.0.8"; sha256="11fy8545g93b8dn2imihsb031lnf5g5z17km8q07q4y6g96xdbdv"; depends=[Hmisc pracma sp]; }; - colorspace = derive2 { name="colorspace"; version="2.0-1"; sha256="0pj2hji71c18kwwk1pp2fj6s4jl7lm2yn47ls0dqsrsqc3ixsbzq"; depends=[]; }; + colorspace = derive2 { name="colorspace"; version="2.0-2"; sha256="0fhq2aykdkxh3r90i8aqjyb37p5api3mjd19ch8mzv99q4pcv4dq"; depends=[]; }; colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.3.6"; sha256="13fqn6hbqjk3d8krpqb3hmsq06qrbks8a9ia5441hd6m7m8wjjkc"; depends=[httr jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.1.0"; sha256="1qjispj7i12m02js5cm5xlgn5lyff0kc5ybz6lbknz8q5lkbdyrd"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; colourvalues = derive2 { name="colourvalues"; version="0.3.7"; sha256="1xpdxqx328l6rjmys7gqrq9pyla7sfmb3xzjrhyksx7i4ncmndpr"; depends=[BH Rcpp]; }; - colourvision = derive2 { name="colourvision"; version="2.0.3"; sha256="1q933jrglml9bc5djq900fkbsmhvhxqcb55ssi27mv3xqdk5d6d8"; depends=[Matrix]; }; + colourvision = derive2 { name="colourvision"; version="2.0.4"; sha256="1abrp6x9wdl5bdbysgziznzmiaik8v4n76b4bgnlk13mwbhfn47h"; depends=[Matrix]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; comFuncs = derive2 { name="comFuncs"; version="0.0.5"; sha256="1n17s28rf6jbii8cffzxylp5dr47x4my7chvf2j1zh4vrkml0n1n"; depends=[rstudioapi shiny]; }; comat = derive2 { name="comat"; version="0.9.1"; sha256="044szmsyjp230mnya5056lnwfjsm607fwhknbdkwx1rbpsm4k0a0"; depends=[Rcpp RcppArmadillo]; }; comato = derive2 { name="comato"; version="1.1"; sha256="0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; combinat = derive2 { name="combinat"; version="0.0-8"; sha256="1h9hr88gigihc4na7lb5i7rn4az1xa7sb34zvnznaj6pdrmwy4qm"; depends=[]; }; + combinationpvalues = derive2 { name="combinationpvalues"; version="0.1.4"; sha256="0n5dhgss8mrxshfixpc10g1p7l06hcn3fbk7l9sp92ap64kalz6c"; depends=[chi dplyr spatstat_utils]; }; combinedevents = derive2 { name="combinedevents"; version="0.1.1"; sha256="0fwsxn2ziapax1wy9k57n76z3nxqb22vfbp5r3y6xg3aparxdxpz"; depends=[lubridate magrittr rlang stringr]; }; + combiroc = derive2 { name="combiroc"; version="0.2.3"; sha256="0plg8w96jr5lnishjmcxa1a3nw14jyfaybgr0vcimhx32zv6b14c"; depends=[devtools dplyr ggplot2 gtools moments pROC stringr tidyr]; }; combiter = derive2 { name="combiter"; version="1.0.3"; sha256="11pcvrpbvkzkjwks2z6ww7s9d5fkh8zl0jw52a5ya3y1wkqcs3n6"; depends=[iterators itertools Rcpp]; }; comclim = derive2 { name="comclim"; version="0.9.5"; sha256="1s6zh16j0q2n7gkvhd4bym9w3hyg4b9n5lpgspqp2nlygdl6jxxb"; depends=[]; }; cometExactTest = derive2 { name="cometExactTest"; version="0.1.5"; sha256="0ar9axm9cd1wd937xcmsmd7xqilnfyab8gsrpkiqpc3fjh86qyrp"; depends=[dplyr]; }; @@ -7007,24 +7279,25 @@ in with self; { compas = derive2 { name="compas"; version="0.1"; sha256="1ckryllwd8avz6456970qhfa3wpcsmhkicnibnv7gl4crzf44xgx"; depends=[bio3d Rcpp RcppEigen]; }; comperank = derive2 { name="comperank"; version="0.1.1"; sha256="0wz46rkpx1cjjng3i03pms2x27cik9wbx7al5r289ym3664zb83m"; depends=[comperes dplyr Rcpp rlang tibble]; }; comperes = derive2 { name="comperes"; version="0.2.5"; sha256="0pfpbnbnpln3srn2m248v0n72mw72fh0rvqpvswi1qmjcpkfkd7v"; depends=[dplyr magrittr rlang tibble tidyr]; }; - competitiontoolbox = derive2 { name="competitiontoolbox"; version="0.1.3"; sha256="0yqrnbg2chyh9idqpiq5v6wc2708a6r4z7vvlwkpnxp19saa8s06"; depends=[antitrust ggplot2 rhandsontable shiny trade]; }; + competitiontoolbox = derive2 { name="competitiontoolbox"; version="0.7.0"; sha256="0cb298fnivw3hqn99jgxlg7qfjkwy6zs0vgkc3x7vz3alk17p5p1"; depends=[antitrust ggplot2 rhandsontable shiny trade]; }; completejourney = derive2 { name="completejourney"; version="1.1.0"; sha256="0ysbpmd7rglz3diy2cpcgvmmcnysradb4ddiwix7kbhzrhvhrdrs"; depends=[curl dplyr progress stringr tibble zeallot]; }; complexNet = derive2 { name="complexNet"; version="0.1.0"; sha256="0jswxr16j7irjbfc5p5vgdaksh3gs8gyx3cwbs0acrpyykxpi5k7"; depends=[]; }; complexity = derive2 { name="complexity"; version="1.1.1"; sha256="1lpsvry88jpqfw0wkdlwjzkqjl17f4adjcqvq0dwk483mi54xnfk"; depends=[combinat shiny]; }; complexplus = derive2 { name="complexplus"; version="2.1"; sha256="16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.7.0"; sha256="0dvkc5y53041agkjz3rl898hkq686pxzr6flf2qx1g3jbza3pk1y"; depends=[boot ggplot2 robustbase scales]; }; - compositions = derive2 { name="compositions"; version="2.0-1"; sha256="03qslsfx11gshls901zlhw47prd55mf16w4mkmd8x1dgiwq938l4"; depends=[bayesm MASS robustbase tensorA]; }; + compositions = derive2 { name="compositions"; version="2.0-2"; sha256="05pji62pzgfk9dyiybmr16q0h6mdzsmvyzxdni3hn0dvl4a7mr5m"; depends=[bayesm MASS robustbase tensorA]; }; composits = derive2 { name="composits"; version="0.1.0"; sha256="1j2bbl0p7dhlf18n1164qdbch2qa5nzk66qh4xlrrhr36zip88y4"; depends=[anomalize dobin dplyr fastICA forecast ggplot2 gridExtra ICS kableExtra otsad pracma rlang tibble tidyr tsoutliers]; }; compound_Cox = derive2 { name="compound.Cox"; version="3.20"; sha256="18fgc58jqrjls1rkzrpy338m3yyxaqkv7dfv31a2sf551ynajcfy"; depends=[numDeriv survival]; }; comprehenr = derive2 { name="comprehenr"; version="0.6.10"; sha256="1wlc06swm45nxg9hgik3wj832sr074i3p0j5kxm0i2r74klfy22w"; depends=[]; }; compstatr = derive2 { name="compstatr"; version="0.2.1"; sha256="0pg8yacfb7jvg9xr0gmis8a4g339isd77h6wr8dd6w900q47xac0"; depends=[dplyr fs httr janitor lubridate purrr readr rlang rvest sf stringr tibble tidyr xml2]; }; compute_es = derive2 { name="compute.es"; version="0.2-5"; sha256="00133s3l3g70xrfnxgxhvbjr8izvaj9h0c73iaiyjmlgj84x69m8"; depends=[]; }; - comsimitv = derive2 { name="comsimitv"; version="0.1.4"; sha256="1b7yh9rnp7h4642sk0yngqy68iwl2kjzfcidmpy6l8lakfnmshin"; depends=[MASS vegan]; }; + comsimitv = derive2 { name="comsimitv"; version="0.1.5"; sha256="0g1b14bx0dgy7y24gxlj0r2sgiild14cvr1zmf37df7g3bswn112"; depends=[MASS vegan]; }; comtradr = derive2 { name="comtradr"; version="0.2.2"; sha256="177gnmgwqns65z5y9nw4xp8qmw5z70454zb54jw1879xrgfsrciz"; depends=[httr jsonlite magrittr purrr]; }; con2aqi = derive2 { name="con2aqi"; version="0.1.0"; sha256="1gdd1y6xg26fz199hvryzsnp16qbsz13chqqxyxnkgrai1l72mhf"; depends=[]; }; con2lki = derive2 { name="con2lki"; version="0.1.0"; sha256="005bk3y7il94h7zlkdjlibm1zm9yplbbzlybdjxmckh67sr6d03x"; depends=[]; }; conStruct = derive2 { name="conStruct"; version="1.0.4"; sha256="1klhzsxrkbz16dnm3r2qxyq2z02zqrps9kij2jy6241ni9qmnn2f"; depends=[BH caroline doParallel foreach gtools Rcpp RcppEigen rstan rstantools StanHeaders]; }; concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; + concatipede = derive2 { name="concatipede"; version="1.0.1"; sha256="1cmc0pcy9di1bxzj4kgbnvv1avd7xd6jzk43kni7fc5fkcq2jj3x"; depends=[ape dplyr igraph magrittr qualV readxl stringdist stringr tibble writexl]; }; concaveman = derive2 { name="concaveman"; version="1.1.0"; sha256="0b3fx3y60ibb73pqx5591jq1n86242qajfxbz3vzz6rxxspddlcz"; depends=[dplyr jsonlite magrittr sf V8]; }; conclust = derive2 { name="conclust"; version="1.1"; sha256="1k9y1mniy7s51dmm5ia693k72s2vxk5bznxxf74s7mx9n3mg2i8r"; depends=[]; }; concorR = derive2 { name="concorR"; version="0.2.1"; sha256="15pi24xka83p3hm33rfs9vnfkzywmvpz3hpncgqmc9ifwag0zgra"; depends=[igraph sna]; }; @@ -7043,7 +7316,7 @@ in with self; { condusco = derive2 { name="condusco"; version="0.1.0"; sha256="0zydinzlksynkz4r712rzv9qqdx8dkdz3h1ygi9cfmd6hya3580s"; depends=[assertthat bigrquery DBI jsonlite]; }; condvis = derive2 { name="condvis"; version="0.5-1"; sha256="1ngxqfa0mr86cv610da4ljypxpdvx0n5pfgj3zfksnwxlwc0dvbj"; depends=[MASS]; }; condvis2 = derive2 { name="condvis2"; version="0.1.1"; sha256="1al7dx1x4028m3aggblwxn9qsb69swh9nil9bx7d0z32cqakka04"; depends=[cluster colorspace DendSer ggplot2 gower plyr RColorBrewer scales shiny]; }; - coneproj = derive2 { name="coneproj"; version="1.14"; sha256="0km7njsxjgrv4d8bx709nci59ngm00jg1r55702yapyjl0f2zg93"; depends=[Rcpp RcppArmadillo]; }; + coneproj = derive2 { name="coneproj"; version="1.15"; sha256="1z28lvy02b2yymjkxi3z5mr0s3mhvvdvjx52hxx71znby6vk14yw"; depends=[Rcpp RcppArmadillo]; }; conf = derive2 { name="conf"; version="1.7.0"; sha256="1h9lc2k2h7h592a7gzr2jwvc4ifjsr41pygad2k7xy8ah3cnv7c1"; depends=[fitdistrplus pracma rootSolve STAR statmod]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; }; @@ -7057,23 +7330,31 @@ in with self; { conflr = derive2 { name="conflr"; version="0.1.1"; sha256="1bjdmvi0n8746g7dxwgzh3fi33sq4bgfr0nd3nqd2caj8ryi2gv9"; depends=[askpass commonmark curl glue httr knitr miniUI purrr R6 rlang rmarkdown rstudioapi shiny stringi xml2]; }; conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; }; confoundr = derive2 { name="confoundr"; version="1.2"; sha256="000vf828qv04pplx8yc8q3mafxf4g0axip6z5zbsj2581yxv9jjh"; depends=[dplyr ggplot2 gridExtra magrittr purrr rlang Rmpfr scales stringr tidyr]; }; - confreq = derive2 { name="confreq"; version="1.5.5-2"; sha256="0r6icz35vaxgl2jia1r5hmg0vp3aig417b3420zasjwd6k755i8f"; depends=[gmp]; }; + confreq = derive2 { name="confreq"; version="1.5.6-4"; sha256="0mi6panjdvgpxwpylg6s3bhx9679jpqrxsicb14lq1w6c20rg7qj"; depends=[gmp vcd]; }; conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; conjoint = derive2 { name="conjoint"; version="1.41"; sha256="1iq3226a6fn1gddmh2nxlzvjcvbj7502r9520g9d4xdmk8smfx33"; depends=[AlgDesign broom cluster fpc ggfortify ggplot2]; }; conjurer = derive2 { name="conjurer"; version="1.2.0"; sha256="05j5y5d7zkv1aq0vcnfxl5l9lgg2z8avfqz8a4fmmgrq29mlblq2"; depends=[]; }; + conleyreg = derive2 { name="conleyreg"; version="0.1.4"; sha256="04blnplwzg930775jlz5hvxdmv0dyrrx25si5pvf7x6p9lvhzbf0"; depends=[data_table doParallel fixest foreach lfe lmtest lwgeom Matrix Rcpp RcppArmadillo Rdpack sf]; }; + conmet = derive2 { name="conmet"; version="0.1.0"; sha256="0iwr8mmh9lk0psqxkgnd7ldhg57ivbkv0b3a18gli06983mhzjdc"; depends=[dplyr DT foreign Hmisc lavaan openxlsx purrr semTools shiny shinydashboard shinyWidgets stringr summarytools waiter]; }; connections = derive2 { name="connections"; version="0.1.1"; sha256="08fbyzyp26nh1a46p0zi3q0wzgl0cd9bjp4lhw2bwv1bv7yayamp"; depends=[DBI dbplyr dplyr pins rscontract uuid]; }; + connectwidgets = derive2 { name="connectwidgets"; version="0.1.1"; sha256="0sj8nik6dyyzflpq9vqd8wzlhky6jl2wfiaz788i6a2wdhckyc1m"; depends=[bslib crosstalk digest dplyr glue htmltools htmlwidgets httr jsonlite magrittr purrr R6 reactable reactR rlang sass tibble]; }; conogive = derive2 { name="conogive"; version="1.0.0"; sha256="0a8v7v0fds0psfnbx9x45way8z1f1xn2ncgbrn5rb6fjq0a1zs4x"; depends=[assertthat checkmate mvtnorm psych]; }; - conos = derive2 { name="conos"; version="1.4.0"; sha256="1kpsxsispsnnvlaak88sxrp1j25zafdgshbb3kh8m1zpxr9pip1s"; depends=[abind ComplexHeatmap cowplot dendextend dplyr ggplot2 ggrepel gridExtra igraph irlba leidenAlg magrittr Matrix Matrix_utils N2R R6 Rcpp RcppArmadillo RcppEigen RcppProgress reshape2 rlang Rtsne sccore]; }; + conos = derive2 { name="conos"; version="1.4.3"; sha256="15gbaa2lq256fgd4wgvf6hkv0k9w45764kya55hcr1z6wqx53i7z"; depends=[abind ComplexHeatmap cowplot dendextend dplyr ggplot2 ggrepel gridExtra igraph irlba leidenAlg magrittr Matrix Matrix_utils N2R R6 Rcpp RcppArmadillo RcppEigen RcppProgress reshape2 rlang Rtsne sccore]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; conquer = derive2 { name="conquer"; version="1.0.2"; sha256="1zvlsrbmrij011mcdi3qngs1al2lhrdiyknxnk0w1zhzrra62bsl"; depends=[Matrix matrixStats Rcpp RcppArmadillo]; }; conquestr = derive2 { name="conquestr"; version="0.8.5"; sha256="1xh09a379g1msib5fvf72llvf2gwqb7ciacw7j7iqrkb2ddpaglk"; depends=[ggplot2 ggrepel Rcpp reshape rlang stringr]; }; + conserveR = derive2 { name="conserveR"; version="1.0.4"; sha256="05b1pqgbd9sh4lyg9zqjfg4019dqp8xj3k1w31qqdld8m3g5lrd6"; depends=[cowplot GGally ggplot2 ggrepel magrittr network rlang scales sna]; }; + consort = derive2 { name="consort"; version="0.2.0"; sha256="12r01p3kszybp8snb6bqhp59w2rzk8wc1jrd2rd1fgvrd134s7ph"; depends=[Gmisc]; }; + consortr = derive2 { name="consortr"; version="0.9.1"; sha256="1c71wvr7sckrv4k65l71l160z6d9amzyydbi6mf2b79zh9zv8g1g"; depends=[data_table DiagrammeR dplyr magrittr purrr rlang shiny shinydashboard tibble]; }; constants = derive2 { name="constants"; version="1.0.1"; sha256="11nliijwphqphik95b3xpawpjg7w4s089wdhjci5bw4va4bgd1xm"; depends=[]; }; constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; + contTimeCausal = derive2 { name="contTimeCausal"; version="1.0"; sha256="1lyiy0hs5xms6hgr7cv5cxh7v09612qsknjwmrr8w07y0h37qg5l"; depends=[dplyr survival zoo]; }; + contact = derive2 { name="contact"; version="1.2.8"; sha256="1db3vgjlz0ivw3sx37mwy7ngjx0in3rxlm3i3akh4xzbfp9gjj87"; depends=[ape data_table doParallel foreach igraph lubridate raster rgdal rgeos sp]; }; contactdata = derive2 { name="contactdata"; version="0.2.0"; sha256="1hcibqkfisv28d38ymgvmkkbs4jl3lbp2safyd5abf185043263d"; depends=[]; }; container = derive2 { name="container"; version="0.3.0"; sha256="128fj97mx52kap299fmhn3whnaismsd4cq3zqpbfvwxx2ii4fd33"; depends=[R6]; }; - contentid = derive2 { name="contentid"; version="0.0.10"; sha256="0c3w51ma5iarw63pb2byx15ab5wd7h4n7h7as7r8wdlgfxi69d03"; depends=[curl fs httr openssl]; }; + contentid = derive2 { name="contentid"; version="0.0.12"; sha256="115g4l40wb1rnc5vbw6fsap7d291f4ycr30viz9qsfw92zna8vmd"; depends=[curl fs httr openssl]; }; contextual = derive2 { name="contextual"; version="0.9.8.4"; sha256="0lww36nymg2cla83jdvl7a42cwn0il20apciz0ddplq8rw2i0a91"; depends=[data_table doParallel foreach Formula iterators itertools R_devices R6 rjson]; }; contfrac = derive2 { name="contfrac"; version="1.1-12"; sha256="0sq5c7ny235yrkv2xc4insgxby6rvzc1qsj8h301cd2if3lwbgwm"; depends=[]; }; conting = derive2 { name="conting"; version="1.7"; sha256="08f271j3gxcp4shda08kkv0v9ayaadvxgcglfsn6hjmw4hn298zg"; depends=[BMS coda gtools mvtnorm tseries]; }; @@ -7087,28 +7368,27 @@ in with self; { convdistr = derive2 { name="convdistr"; version="1.5.3"; sha256="1cp2qpyl0jxp0lwznlc94mcigfgysyq9xmi1z7ihd7jxd9mk8aw9"; depends=[dplyr extraDistr ggplot2 MASS pryr RColorBrewer SHELF shiny tidyr]; }; convergEU = derive2 { name="convergEU"; version="0.5.1"; sha256="1s42ki2shn3nd902gxbbmjch64iaq3iy3c592nq54w5jq5xd43f7"; depends=[broom caTools dplyr eurostat ggplot2 ggpubr purrr rlang rmarkdown stringr tibble tidyr]; }; convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; + convertid = derive2 { name="convertid"; version="0.1.3"; sha256="00mi1jwb5b07j182zf68fqasb9ggkbk4c8dd1i0wlad7az2rz494"; depends=[AnnotationDbi biomaRt org_Hs_eg_db org_Mm_eg_db plyr stringr xml2]; }; convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; convevol = derive2 { name="convevol"; version="1.3"; sha256="1b0lygbrdm6rqascck5iwjnm248lklc4cxr71qlgand5jsblpcnn"; depends=[ape cluster geiger MASS phytools]; }; convexjlr = derive2 { name="convexjlr"; version="0.8.1"; sha256="1x2ra1xcyd7bvc7wq49wpihh0g9ygh1bq5214vvrhfrjfjifvlaw"; depends=[JuliaCall magrittr]; }; - convey = derive2 { name="convey"; version="0.2.3"; sha256="0b516azyxx4pr0b105zfn9wd9b9s6cfar864pphm6gydn1rkni2a"; depends=[survey]; }; + convey = derive2 { name="convey"; version="0.2.4"; sha256="0khhnvazslvv7ma4fk70qzcazgv1aair1vcvx22bsic2mvgdb0fc"; depends=[survey]; }; convoSPAT = derive2 { name="convoSPAT"; version="1.2.7"; sha256="1pmiirigjdkrb3pzqcw6qlh6418z384mvaxqw5mrcm1gxzrqp649"; depends=[ellipse fields MASS plotrix StatMatch]; }; cooccur = derive2 { name="cooccur"; version="1.3"; sha256="1wlaghhi4f3v8kzwhcgq3c6as7v3zlpkzhb232qz1amr7f0058kv"; depends=[ggplot2 gmp reshape2]; }; - cooccurNet = derive2 { name="cooccurNet"; version="0.1.6"; sha256="1vqfmvjrxxn977jrry47wn4lag4yi4bkyxwlis3n1ly39kkmyh2j"; depends=[bigmemory doParallel foreach igraph knitr Matrix pryr seqinr]; }; - coop = derive2 { name="coop"; version="0.6-2"; sha256="052n2h7yhjj88x87sd3ci9ahhhn5r5rvsm79kh3r2zqbxsr8zzrh"; depends=[]; }; + coop = derive2 { name="coop"; version="0.6-3"; sha256="0ww99ssgawsgn6rqy838wbx6iirzdrzyxirvz084ih8j50blx420"; depends=[]; }; coopProductGame = derive2 { name="coopProductGame"; version="2.0"; sha256="1348pgqfvvysdixsjibgkvwjsmqasnlmwf9kyr39lw8jb81z25h0"; depends=[dplyr GameTheory ggplot2 gtools kappalab lpSolveAPI]; }; cooptrees = derive2 { name="cooptrees"; version="1.0"; sha256="0izvwna1jsqik3v5fz1r4c86irvma42clw0p4rdvwswv5pk698i1"; depends=[gtools igraph optrees]; }; - copBasic = derive2 { name="copBasic"; version="2.1.5"; sha256="0p7ngjpfhl4mjrcjmadik2ly5zzyjfafywjmaxza7frgrj6bflf4"; depends=[lmomco randtoolbox]; }; + copBasic = derive2 { name="copBasic"; version="2.1.6"; sha256="0k63cgwqpr2gj7632agwfy5x571hgl2bnrrazdkqg2q75nivh57k"; depends=[lmomco randtoolbox]; }; copCAR = derive2 { name="copCAR"; version="2.0-4"; sha256="1wvp7khp0f0x6skiq1d6npndb09ak6d6ijmx907gfrd6b0ydaklb"; depends=[mcmcse numDeriv Rcpp RcppArmadillo spam]; }; cope = derive2 { name="cope"; version="0.2.3"; sha256="1r02nb6wy25ixhdcbqqz167s7ny3hydpxfxry5ar4136qvcamgyy"; depends=[abind fields maps MASS Matrix mvtnorm nlme]; }; copent = derive2 { name="copent"; version="0.2"; sha256="0cqq18swjawmn3avbi5v6ihqg3xx9i7qhmxdrm4wk4w6cispc0zb"; depends=[]; }; coppeCosenzaR = derive2 { name="coppeCosenzaR"; version="0.1.3"; sha256="1chwsfyaf5rmlsypr43n7px8b2220dfa5mzcriq1swylgbx4181l"; depends=[]; }; - coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; cops = derive2 { name="cops"; version="1.2-0"; sha256="0bw13yhvnq5qw9rgmvf7w3kmygbpx58168rm546x8v155ywccvfx"; depends=[cmaes cordillera crs dfoptim GenSA MASS minqa NlcOptim nloptr pso rgenoud Rsolnp scatterplot3d smacof subplex]; }; copula = derive2 { name="copula"; version="1.0-1"; sha256="0hlpj1xiv21zx52cqmdgxgz05xdsharacalm025y8ybkzk7jr6yh"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaData = derive2 { name="copulaData"; version="0.0-1"; sha256="1s917g8wasxndg1xq4b4fjaq29nyzzigpflgqcy4rxdb7r54dl0z"; depends=[]; }; copulaedas = derive2 { name="copulaedas"; version="1.4.3"; sha256="01wp8jnz7kndknj7lh9ia7mm41k1vbaksalyy9v19bb77yhgzmba"; depends=[copula mvtnorm truncnorm vines]; }; copulareg = derive2 { name="copulareg"; version="0.1.0"; sha256="0wn40rvh2dg60h45qbzy7nwcy2rhrnxf1rykl1ycs75mrimaayn9"; depends=[rvinecopulib]; }; - corHMM = derive2 { name="corHMM"; version="2.6"; sha256="1kydz2nwkjj20i2fn5wfzr10wfh0w6ms6waij53z93nygrqfjvbj"; depends=[ape corpcor expm GenSA igraph MASS nloptr nnet numDeriv phangorn phytools Rmpfr viridis]; }; + corHMM = derive2 { name="corHMM"; version="2.7"; sha256="02i7rv00pjkj60nrdjrrnyqfy1dwzvc1jsf2pi1l721zdc7vlm0d"; depends=[ape corpcor expm GenSA igraph MASS nloptr nnet numDeriv phangorn phytools Rmpfr viridis]; }; corTest = derive2 { name="corTest"; version="1.0.7"; sha256="1gip8rxvbhrckwmjwmxbmycndg4jrl75x8qda9l35znfv9r7p0nq"; depends=[Biobase clusterGeneration ggplot2 igraph MASS Matrix]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; cora = derive2 { name="cora"; version="0.1.0"; sha256="0mx7dn05js8hqr3xgrbp2kv25y6qjlm86y6asy17hwbbvbsmama9"; depends=[]; }; @@ -7120,6 +7400,7 @@ in with self; { coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; }; coreTDT = derive2 { name="coreTDT"; version="1.0"; sha256="14rnh61gk3m6g8rq77hm9ybds0px15di2mxm3jiyfdfynx5ng58f"; depends=[]; }; + coreheat = derive2 { name="coreheat"; version="0.2.2"; sha256="1mahnd6k7whd7nj9ax1fhpm17j35i6prww06qx691l8dfn954ld9"; depends=[Biobase convertid heatmapFlex WGCNA]; }; corehunter = derive2 { name="corehunter"; version="3.2.1"; sha256="0cxvhmi768kz3q8hydb6y9nqvc8hvkmq8nc5yfry4k94whk12wax"; depends=[naturalsort rJava]; }; corels = derive2 { name="corels"; version="0.0.2"; sha256="0b8fwm2z1jaslg2b0phb4w31qvdp4g91q0jf2dfa6g7gg8lh4crn"; depends=[Rcpp]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; @@ -7129,29 +7410,29 @@ in with self; { coro = derive2 { name="coro"; version="1.0.1"; sha256="0r7id3dcf5rlksspsck2vv8jnisvrcc1vnkv6zpr8xh214794n3f"; depends=[rlang]; }; coroICA = derive2 { name="coroICA"; version="1.0.2"; sha256="0pcz2256liczrn2gik8b5331rgzlxjrm7rzn1ialhifkiinifnva"; depends=[MASS]; }; corona = derive2 { name="corona"; version="0.3.0"; sha256="1hggsmvmbim7f6bybmdhxznmqib0k2plm370mjs7dp85i564sjkm"; depends=[gganimate ggplot2 gridExtra plyr qicharts2 reshape2]; }; - coronavirus = derive2 { name="coronavirus"; version="0.3.21"; sha256="00v0ka5lnz6j5nhgyhl9v3mhqaxklzf8yn341a6n02wwbmywh4cs"; depends=[devtools]; }; - corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; + coronavirus = derive2 { name="coronavirus"; version="0.3.30"; sha256="0896zzvkz6hbnldljlzw2kkh5jml49yjw93fryzwyn47rsd3g5rs"; depends=[devtools]; }; + corpcor = derive2 { name="corpcor"; version="1.6.10"; sha256="028fw61n61i79fhnaqx7gmdifdpbvp3yiaq9vvfrbv4k7i84r83i"; depends=[]; }; corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.4"; sha256="0ffickzig9798273gm401ma0lm32zgcd5p549935gfgbyjlxzxps"; depends=[data_table dplyr ggplot2 lubridate magrittr padr plyr RColorBrewer rlang rmarkdown scales shiny shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr]; }; corpus = derive2 { name="corpus"; version="0.10.2"; sha256="0fxa38xbd5fyhh0q1ycx8snj7ly8hv9jclbs77agkb6pb6p7yr64"; depends=[utf8]; }; - corpustools = derive2 { name="corpustools"; version="0.4.7"; sha256="1k0lxqa7v6cj772z4bbq8xcv52g7f61gvq3kkg0fvp4rmbl1nzvw"; depends=[data_table digest igraph Matrix pbapply quanteda R6 Rcpp RcppProgress RNewsflow rsyntax SnowballC stringi tokenbrowser udpipe wordcloud]; }; + corpustools = derive2 { name="corpustools"; version="0.4.8"; sha256="06x8lxcpizlmxnj4vg2k5inb4kb4jfx973x5pg3wiw4vyp3wvcck"; depends=[data_table digest igraph Matrix pbapply quanteda R6 Rcpp RcppProgress RNewsflow rsyntax SnowballC stringi tokenbrowser udpipe wordcloud]; }; corr2D = derive2 { name="corr2D"; version="1.0.2"; sha256="1g8vxqbyp162a9jm4dwhyviifddddri585xn42gd6gwfx0vzmaji"; depends=[colorspace doParallel fields foreach mmand profr xtable]; }; corrDNA = derive2 { name="corrDNA"; version="1.0.1"; sha256="1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k"; depends=[mvtnorm]; }; corrarray = derive2 { name="corrarray"; version="1.2.0"; sha256="1hsk425xjz9p3wwvia7h78dg24qsr5r977xm2ap5z40ah1bw7bzi"; depends=[Hmisc]; }; corrcoverage = derive2 { name="corrcoverage"; version="1.2.1"; sha256="0r5n2g341jlinwrxxwxkav9i6qsf097pmfi07aiq663b13r3864x"; depends=[data_table magrittr matrixStats Rcpp RcppArmadillo]; }; correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="2.0.2"; sha256="1v048dibn2x3y5mi2damcsr9i5kdig5n53g5j9gf31lqkzzjmnh3"; depends=[data_table diagram ellipse gplots rgl]; }; - correlation = derive2 { name="correlation"; version="0.6.1"; sha256="1laiqfppl68vnjz1rxb6jvrpxbdgdf3f9bg4k48jkbcn6cvc0v3x"; depends=[bayestestR effectsize insight parameters]; }; + correlation = derive2 { name="correlation"; version="0.7.0"; sha256="1k3lcjriyhrz3dkdcp19mxkmql8v89hnx14k45ck8yfsq8pfhi1d"; depends=[bayestestR datawizard insight parameters]; }; correlationfunnel = derive2 { name="correlationfunnel"; version="0.2.0"; sha256="0xil7cihqk7gzpy0q97sg5sw5z0gy7zqvx0f0bizcfks9gwp43cv"; depends=[cli crayon dplyr forcats ggplot2 ggrepel magrittr plotly purrr recipes rlang rstudioapi stringr tibble tidyr]; }; correlbinom = derive2 { name="correlbinom"; version="0.0.1"; sha256="1ix3ccxzr7vqblbda5awsva3h95b69v7kc6adz622bbi8r36xxcq"; depends=[Rmpfr]; }; corrgram = derive2 { name="corrgram"; version="1.14"; sha256="12dhvwaprdmzxxk52w8sb3cx99dmzb9yhcm01pri0vcz671p57v1"; depends=[]; }; corrgrapher = derive2 { name="corrgrapher"; version="1.0.4"; sha256="0s10n2av6dyjz6x4wvznpcbvpp63v6k3r9whkqsg7fiy9m3d4dr9"; depends=[ggplot2 htmltools ingredients knitr visNetwork]; }; - corrplot = derive2 { name="corrplot"; version="0.84"; sha256="1k03qd8db7pwg1v318xapx5mpiypiz2n07qr19c4b45diri5xkhd"; depends=[]; }; + corrplot = derive2 { name="corrplot"; version="0.90"; sha256="1pfmjqgakf7706l9257lqqnb6kin79gc94xfg7w47x2ijchiz1yr"; depends=[]; }; corrr = derive2 { name="corrr"; version="0.4.3"; sha256="096j9y1i1g7wgvn15vpil63cnb24mm0fgklbsgygwwgnlx2j0rgg"; depends=[dplyr ggplot2 ggrepel purrr rlang seriation tibble]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; cort = derive2 { name="cort"; version="0.3.2"; sha256="1iayvgwjmpmb96w5841jxhwivca7s4v5bpsdy0lrbk121saqq5z1"; depends=[furrr nloptr osqp purrr Rcpp Rdpack]; }; - corto = derive2 { name="corto"; version="1.1.4"; sha256="09bn4sjcxw75mcj2n2ngs87ymmlrlkqsipl1nwxrzdjaw2qswddf"; depends=[dplyr gplots knitr pbapply plotrix rmarkdown]; }; + corto = derive2 { name="corto"; version="1.1.8"; sha256="0rp2fxqncm3kqsfinngsrvah69dgc7qasxk0kkcb0mh5s3akyfxk"; depends=[dplyr gplots knitr pbapply plotrix rmarkdown]; }; corx = derive2 { name="corx"; version="1.0.6.1"; sha256="179fxjagbq33549zyk234kz9ajbifl7qpmdy0lrw9vzjc8aqbycf"; depends=[clipr crayon ggcorrplot ggplot2 ggpubr glue magrittr moments ppcor psych tidyselect]; }; cosa = derive2 { name="cosa"; version="2.0.0"; sha256="1ra1m75ay829xlhjax82px4ffflnfgh2mrmzzj4i8ml545d9hmgr"; depends=[msm nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; @@ -7160,17 +7441,17 @@ in with self; { cosso = derive2 { name="cosso"; version="2.1-1"; sha256="1wyq27qak0kz4bbzynm24r5ksvb6ddd43h2ykh6m935xck16blyb"; depends=[glmnet quadprog Rglpk]; }; costat = derive2 { name="costat"; version="2.4"; sha256="0c47bklqjgjmdglw3mi9lvygwjr5w6i1zv91ll3vpnl5dnay0692"; depends=[wavethresh]; }; costsensitive = derive2 { name="costsensitive"; version="0.1.2.10"; sha256="192q55123yzcjjh4047ppxa3h7gk9afqnvm1nlhzs4ccqz71g411"; depends=[]; }; - cotram = derive2 { name="cotram"; version="0.2-1"; sha256="0rrr165h72jda42jbxdnrr0qk34g3lp1p0q1cykvvhpzyass4b07"; depends=[basefun mlt tram variables]; }; + cotram = derive2 { name="cotram"; version="0.3-0"; sha256="1bknh2xfr59dc02l2da3s507wyx2sy1w0ig2j3g0sj4f8dy6gvrr"; depends=[alabama basefun Matrix mlt tram variables]; }; cotrend = derive2 { name="cotrend"; version="1.0.2"; sha256="17h67vnpnlv11bf3ka5mlnah9bizxjhvicsvbygy91dqbhjhj9wb"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; countHMM = derive2 { name="countHMM"; version="0.1.0"; sha256="12z0nz7in2msb5wa5yyjxx19ih8psw06m7xwlapvjksslippp6gs"; depends=[]; }; countToFPKM = derive2 { name="countToFPKM"; version="1.0"; sha256="0h89knii8zkbq0lw7yn3qzak30s7bifq53ga4vy6za6hqwc53x2j"; depends=[circlize ComplexHeatmap]; }; countTransformers = derive2 { name="countTransformers"; version="0.0.6"; sha256="14n2sv7wqzslrzg0ag473ljj9mvha94161p5yh2h9l1vx7xliimf"; depends=[Biobase limma MASS]; }; countcolors = derive2 { name="countcolors"; version="0.9.1"; sha256="1gnwmw3inh8asbk6qba34vzx1k2cnh4m9d1346gxhzhlxvl6xiza"; depends=[colordistance jpeg png]; }; - countdata = derive2 { name="countdata"; version="1.1"; sha256="08aa9pjs8gaw9v3jz7i8f0q3r3x82w261b4if375g5h5vw00bmqv"; depends=[]; }; + countdata = derive2 { name="countdata"; version="1.2"; sha256="1yx75x4yg5ysx9zjzd4g5bd0qn11ngdsw1k36k809rd68v690awr"; depends=[]; }; countfitteR = derive2 { name="countfitteR"; version="1.4"; sha256="1aq7v2fy24pf3r6fkmcwvs18r2xc2l1bqablp53xfc7b6kxq3vqn"; depends=[ggplot2 MASS pscl shiny]; }; countgmifs = derive2 { name="countgmifs"; version="0.0.2"; sha256="0k6fjg0v9n7vi89wd025gdjh1q3l6nnc5yn8i2bfw0i5vmv8rhi3"; depends=[MASS]; }; - countrycode = derive2 { name="countrycode"; version="1.2.0"; sha256="0h6x578pci8rch52zan8sxzgwj0c9qpw254zz4pm2gf3vh15giij"; depends=[]; }; + countrycode = derive2 { name="countrycode"; version="1.3.0"; sha256="03y7bc4lss3hwb5bwwspi28razwbdi0pjvy5dpay3v3iwwb18dil"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; covBM = derive2 { name="covBM"; version="0.1.0"; sha256="0ky1lhr8m4hy2ss1nr2xymf6cmj1rr8px8zsxna6bsisf5bq4j4w"; depends=[nlme]; }; @@ -7178,35 +7459,34 @@ in with self; { covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; covTestR = derive2 { name="covTestR"; version="0.1.4"; sha256="0j9kay8lwkhpdyg0fbfars1m58v0i58v1v5sm7m72s7kz8qh2yfs"; depends=[purrr Rcpp RcppArmadillo rlang]; }; covafillr = derive2 { name="covafillr"; version="0.4.4"; sha256="1vsay0qlqcw3l6xp18rxrkhwsadsv9rpxwpj9f4d3vlr8inkiv4h"; depends=[Rcpp RcppEigen]; }; - covatest = derive2 { name="covatest"; version="1.1.3"; sha256="1vhdm8xhzy6mnd81lqqmv4zxwh3x7pc8nrnimcwgdgprlw2fhs0b"; depends=[gstat lubridate matrixcalc sp spacetime zoo]; }; + covatest = derive2 { name="covatest"; version="1.2.0"; sha256="13kmkgn2xjci694g27ii9q6xqxqgxw4hykzynxqxn0v7i6y96xwz"; depends=[gstat lubridate sp spacetime zoo]; }; coveffectsplot = derive2 { name="coveffectsplot"; version="0.0.9.1"; sha256="0yklw2bnaz9abi92rgr14415s5lr23y3qnkj89q08hrkxj61jxmj"; depends=[colourpicker data_table dplyr egg ggplot2 markdown shiny shinyjs table1 tidyr]; }; covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; - covglasso = derive2 { name="covglasso"; version="1.0.2"; sha256="1aq6x6bq24v1398kzw3ai4arjmma09y2p49wp6k77xsl32nkbhkz"; depends=[Rcpp RcppArmadillo]; }; - covid19_analytics = derive2 { name="covid19.analytics"; version="2.1"; sha256="1nh3q7ijb93yamnislklzirysfmm807rqycvcvg1zmvgl10178mk"; depends=[ape collapsibleTree deSolve dplyr DT gplots htmlwidgets pheatmap plotly readxl rentrez shiny shinycssloaders shinydashboard]; }; + covglasso = derive2 { name="covglasso"; version="1.0.3"; sha256="1201z49w7lacf479gp7q2v5lv8vmprppj656zzi5a4yynm7x2sll"; depends=[Rcpp RcppArmadillo]; }; + covid19_analytics = derive2 { name="covid19.analytics"; version="2.1.1"; sha256="13bzxidnwqdnn7j4737csqjnibyq0vs5iy6yd825m3c9xbj3910s"; depends=[ape collapsibleTree deSolve dplyr DT gplots htmlwidgets pheatmap plotly readxl rentrez shiny shinycssloaders shinydashboard]; }; covid19br = derive2 { name="covid19br"; version="0.1.1"; sha256="1rv4phvqndmjkrgm9q4kink42id95llwcvyimc8jcxdyz7xbs93c"; depends=[data_table dplyr httr lubridate rio rlang tidyr]; }; covid19dbcand = derive2 { name="covid19dbcand"; version="0.1.1"; sha256="0864xixdxzaj697al0c2gq3nk05q1pn0pc9lc2dyki71g5r67i7h"; depends=[]; }; covid19france = derive2 { name="covid19france"; version="0.1.0"; sha256="11072mc794l0m84k2b08zhyfvxf6n6ym91i7kkm3cbirxp6bhnqy"; depends=[dplyr glue lubridate magrittr readr stringr tidyr]; }; - covid19italy = derive2 { name="covid19italy"; version="0.3.0"; sha256="1kqvpiy6ib3amx2cpkj99wm5m9y96b5snzyzhhd7qn31mn2l6hnf"; depends=[devtools]; }; - covid19jp = derive2 { name="covid19jp"; version="0.1.0"; sha256="1yrnl83plz3q2bdns28lkyg4yzzw2101bb7gncv8djj97plicsin"; depends=[devtools]; }; - covid19sf = derive2 { name="covid19sf"; version="0.1.0"; sha256="02n7v4qv2gw9dnc94hz58nzbfiq1ihf1r3g7vlv8sc826v8qw4bs"; depends=[devtools dplyr lubridate magrittr mapview plotly sf]; }; + covid19india = derive2 { name="covid19india"; version="0.1.3"; sha256="0yldpf5nhmh1yb8flizsxcq60pr0xdhq5av7vdpj5wrgldcf9m78"; depends=[cli dplyr EpiEstim glue gt httr janitor magrittr purrr readr scales stringr tibble tidyr tidyselect]; }; + covid19italy = derive2 { name="covid19italy"; version="0.3.1"; sha256="1737lv9w039g5nmwh0kfk5np95ql9skqngk29nqx52zw1yxvwlnh"; depends=[devtools]; }; + covid19sf = derive2 { name="covid19sf"; version="0.1.1"; sha256="1x1h55pjaz55yxpf2qskixk1zbk7wz1m0fkjdd0ypla63054kff8"; depends=[devtools dplyr lubridate magrittr mapview plotly sf]; }; covid19swiss = derive2 { name="covid19swiss"; version="0.1.0"; sha256="083j4568j7yk7l4qj6097zp0ijq70ycvwvmbfqp3dwazmibamy34"; depends=[devtools]; }; covid19us = derive2 { name="covid19us"; version="0.1.7"; sha256="1gy3cbfq89mg0465n4vwqnknnv988i9l2fv6dara8hr1jysic2n3"; depends=[curl dplyr glue httr lubridate magrittr purrr snakecase stringr tibble tidyr]; }; covidcast = derive2 { name="covidcast"; version="0.4.2"; sha256="1lgpkwhyx8pff2p82w5has1jqmj10kniqd1rkhfxr4b1xp21y8z8"; depends=[dplyr ggplot2 httr MMWRweek purrr rlang sf tidyr]; }; covidprobability = derive2 { name="covidprobability"; version="0.1.0"; sha256="00kiwxhkbq70650azgd6ylh7w7w4h5l8l7rmr2bijlm05xn3g154"; depends=[]; }; - covidregionaldata = derive2 { name="covidregionaldata"; version="0.9.0"; sha256="1bnh8mvwwn55isd108pwn0pzanyggxf3w4qkaxrxvrd9rx17asca"; depends=[countrycode dplyr httr lifecycle lubridate magrittr memoise purrr R6 readxl rlang rvest stringr tibble tidyr tidyselect vroom withr xml2]; }; + covidregionaldata = derive2 { name="covidregionaldata"; version="0.9.2"; sha256="1pnsafq5p1m5ij7z5k39g5j2m4qiridj6k6dwpka3b9d9jz7apfk"; depends=[countrycode dplyr httr lifecycle lubridate magrittr memoise purrr R6 readxl rlang stringr tibble tidyr tidyselect vroom withr xml2]; }; covidsymptom = derive2 { name="covidsymptom"; version="0.9.2"; sha256="00qqllg0p21a2gw9xq57ladlf96kxrmc3yx1kzgd81pxvrxqkk9d"; depends=[]; }; covr = derive2 { name="covr"; version="3.5.1"; sha256="0v5cv3cw2kpdr6wxmkbd3wclavr17zipypdcb10hhmpa4cvgqk55"; depends=[crayon digest httr jsonlite rex withr yaml]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.1.0"; sha256="19dvwhl85yx9ddwxvnq5sdd534s6llcw61gckrav48hq49x1bqld"; depends=[mvtnorm]; }; - covsim = derive2 { name="covsim"; version="0.1.0"; sha256="1012fgxn7z85bk1a23v5zswa29njlbdnd9llikp1qy0mrraqlx2h"; depends=[gsl lavaan MASS nleqslv PearsonDS Rcpp rvinecopulib]; }; + covsim = derive2 { name="covsim"; version="0.2.1"; sha256="1gqk5wqbcn8hkznpwxw2a3hrbwfpzn3ynidpg182kashd4683jjp"; depends=[gsl lavaan MASS Matrix nleqslv PearsonDS Rcpp rvinecopulib tmvtnorm]; }; cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; }; cowplot = derive2 { name="cowplot"; version="1.1.1"; sha256="0j7d5vhzdxn1blrsfafx5z8lhq122rp8230hp9czrpsnnhjydp67"; depends=[ggplot2 gtable rlang scales]; }; cowsay = derive2 { name="cowsay"; version="0.8.0"; sha256="12hximrdpikkczpwqjmah11nbwzyf7j1x7zcxa7igqwq8nfgv2yv"; depends=[crayon fortunes rmsfact]; }; coxed = derive2 { name="coxed"; version="0.3.3"; sha256="09jnqza8wp2palayb0vsz43qmh8470gxil1l7g3b65lmxa7wpmnh"; depends=[dplyr ggplot2 gridExtra mediation mgcv PermAlgo rms survival tidyr]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-16"; sha256="04aid8v0y2afwwbfm39np1pgdla4jw427gy2wazsphf495b4pkm0"; depends=[bdsmatrix Matrix nlme survival]; }; - coxmeg = derive2 { name="coxmeg"; version="1.0.13"; sha256="07lzk2a1hdxibzp4l5v20i1swq6v6hxj5j4dj9pkl1j212g40p6n"; depends=[MASS Matrix matrixcalc microbenchmark nloptr rARPACK Rcpp RcppEigen SeqArray SNPRelate]; }; coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; }; coxphf = derive2 { name="coxphf"; version="1.13.1"; sha256="06c83v3lrpzm81aclnl1pyqq2kfflbbmcg911blpr7dgynzk0zk5"; depends=[survival]; }; @@ -7222,7 +7502,7 @@ in with self; { cplexAPI = derive2 { name="cplexAPI"; version="1.4.0"; sha256="00h2zir1ffzjiglfyq8bsfmgq9z155jr0k0fxv8fsbfyw2x9dg10"; depends=[]; }; cplm = derive2 { name="cplm"; version="0.7-9"; sha256="057m61rq2hzb55imj3922zmc9kjxh053k3kgy54a4l0jlxb90lyj"; depends=[biglm coda ggplot2 Matrix minqa nlme reshape2 statmod tweedie]; }; cpm = derive2 { name="cpm"; version="2.3"; sha256="07zbvc5jkwv76lkzby6r073fxjsqgnrdl2w9lcph577knnip89jx"; depends=[]; }; - cpp11 = derive2 { name="cpp11"; version="0.2.7"; sha256="1m31yq3kn5wqvm0ahj08kb4bszbbhfybx3l2x975cjzgv3058h8x"; depends=[]; }; + cpp11 = derive2 { name="cpp11"; version="0.4.0"; sha256="11qyliiw2qrac56mq5h9v7gy3dvwjj1i26pvygwbpprhvh3zss0p"; depends=[]; }; cppRouting = derive2 { name="cppRouting"; version="2.0"; sha256="0yfiyg1clnl85lk5ah8dcchv71drk6r093vpl82xnczyan5z94sr"; depends=[data_table Rcpp RcppParallel RcppProgress]; }; cpr = derive2 { name="cpr"; version="0.2.3"; sha256="1a2lza1bw74xzrs17a9gr9mnpvnnrykhwd73yqi63wp3k4sm42rb"; depends=[dplyr ggplot2 lazyeval lme4 magrittr plot3D Rcpp RcppArmadillo rgl tibble tidyr]; }; cprobit = derive2 { name="cprobit"; version="1.0.2"; sha256="16fnndpkd226paahmadsddakj4yhybw7lp3csr73fwv78zfl2fj9"; depends=[car ggplot2 gridExtra nortest]; }; @@ -7238,7 +7518,7 @@ in with self; { cquad = derive2 { name="cquad"; version="2.2"; sha256="18r779w1c5ggm6qigkmwzk7rwm32fvd82zxw82xvzqj1c2akmfpj"; depends=[MASS plm]; }; cragg = derive2 { name="cragg"; version="0.0.1"; sha256="1iznv72g47r2yd26p1i06a72p8n0albgb4j4l3lndi39wrkrpbwd"; depends=[expm]; }; cramer = derive2 { name="cramer"; version="0.9-3"; sha256="1kdad8nndhics4282gfy9ncllk2kpawdy8ybq71vcd7hc7kf0zq5"; depends=[boot]; }; - crandep = derive2 { name="crandep"; version="0.1.1"; sha256="1czv2n4zqmkryvb56pfzczj8m1qan6kq3q4hlm17a8kp3s9kvlcd"; depends=[dplyr igraph Rcpp RcppArmadillo RcppGSL rvest stringr xml2]; }; + crandep = derive2 { name="crandep"; version="0.3.0"; sha256="06avx6992cd6dm0sx55smvgx8kp5rfd582wi08dffl1qs7df9ysk"; depends=[dplyr igraph Rcpp RcppArmadillo RcppGSL rvest stringr xml2]; }; crank = derive2 { name="crank"; version="1.1-2"; sha256="0wwbdh5sfi2bg13nrlkxxij4k053kjx9afm4gjpgs6iir6pml711"; depends=[]; }; cranlike = derive2 { name="cranlike"; version="1.0.2"; sha256="06xgxgwpmfrwmcd0gnr9prjjbhd1y0ky1zb8yh09v0bvsf6ixnyx"; depends=[DBI debugme desc RSQLite]; }; cranlogs = derive2 { name="cranlogs"; version="2.1.1"; sha256="02d9qrqyjj33naq3g7ykaw9dzzl1dq8qf13id6h7kfx1fvx9b7zd"; depends=[httr jsonlite]; }; @@ -7248,7 +7528,8 @@ in with self; { crawl = derive2 { name="crawl"; version="2.2.1"; sha256="18mr7vp72jj5msj9mbq45jy3f6qhn45azsmkq07i2d30gwdj0c3a"; depends=[dplyr gdistance lubridate magrittr mvtnorm purrr raster Rcpp RcppArmadillo rmapshaper sf shiny sp tibble]; }; crayon = derive2 { name="crayon"; version="1.4.1"; sha256="1ir963s6zk9l32fw257y54p7898cd7z7yazkn9h6j2cdfhpf9dh8"; depends=[]; }; crch = derive2 { name="crch"; version="1.0-4"; sha256="18qjvh1lkw1f6rrhnb21f30xxrcq8whbs3x1jgkw6q14rf1483ri"; depends=[Formula ordinal sandwich scoringRules]; }; - credentials = derive2 { name="credentials"; version="1.3.0"; sha256="1w9zj34xdwz9bszsvhv2cbgq96y5sgxbh7ndn31pgfcpzlkfq6f1"; depends=[askpass curl jsonlite openssl sys]; }; + crctStepdown = derive2 { name="crctStepdown"; version="0.1"; sha256="07y4drz76nqk2lvk2600w3s20qx71xddlxqc8zrw3bh02pgdnpy7"; depends=[fastglm ggplot2 ggpubr lme4 Rcpp RcppArmadillo rlang stringr]; }; + credentials = derive2 { name="credentials"; version="1.3.1"; sha256="0q3s1bibwvw1p541k8a5cjx4dj1iabl4crg61fgjxkniclxag5c7"; depends=[askpass curl jsonlite openssl sys]; }; creditmodel = derive2 { name="creditmodel"; version="1.3.0"; sha256="0cq21y6kzz2gf6kqqkhxlhhkjfm71kx4rqzwwfm1c5572x65x7hm"; depends=[cli data_table doParallel dplyr foreach ggplot2 glmnet rpart xgboost]; }; credsubs = derive2 { name="credsubs"; version="1.1.1"; sha256="19l3vsjxd9lvaf67l61x9l0j4y124p93dfqzw7rl1ya5sxbdzs7a"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.4"; sha256="0kwjjkavch21grx845kdcansaj0g407v7z3wmhy4whra9ic12y76"; depends=[]; }; @@ -7262,21 +7543,21 @@ in with self; { crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; crispRdesignR = derive2 { name="crispRdesignR"; version="1.1.6"; sha256="1h9153iv55qkx9hyf3gs118m99mkzj5mbj6i3jg58chfp0m6jx78"; depends=[BiocGenerics Biostrings DT gbm GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors shiny stringr vtreat]; }; criticalpath = derive2 { name="criticalpath"; version="0.1.0"; sha256="1b8qid85727j6ai7wmm30g44jzsq8im9i29hw1xas09qky63z1n9"; depends=[igraph R6]; }; - critpath = derive2 { name="critpath"; version="0.1.2"; sha256="0csj17h864qd6f7pra1p19wskdaj9ba7vz7j6hj1zhmb9anzp7rp"; depends=[DiagrammeR ggplot2 reshape2]; }; + critpath = derive2 { name="critpath"; version="0.1.4"; sha256="1jr5ra8gwzcfnap87z4snb5mmfqq2iaas2x54kqqcsb2gsk3gchs"; depends=[DiagrammeR ggplot2 reshape2]; }; crmPack = derive2 { name="crmPack"; version="1.0.0"; sha256="11zy1ci9d0zjbmc0gws9j9qrnfcqvky1ws9p41wjn0zifcckc5gi"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; crmReg = derive2 { name="crmReg"; version="1.0.2"; sha256="0y6xb0sxhsqcmcwbkwvk70snwqhxgzl513ld9dp53cm88qdwaj1r"; depends=[FNN ggplot2 gplots pcaPP plyr robustbase rrcov]; }; - crminer = derive2 { name="crminer"; version="0.4.0"; sha256="0yaaj6fxx7rhzcgr6l220qc0n3lf1zlw98m3liq7qw0bcwpnpcrg"; depends=[crul hoardr jsonlite pdftools xml2]; }; crmn = derive2 { name="crmn"; version="0.0.21"; sha256="0wp99fsw7y859gp1x22f77r9rv1m0xspbzhzgshzf7hi86xb57k5"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; crochet = derive2 { name="crochet"; version="2.3.0"; sha256="0zvjaf6cv0nrjb4l4llkr0mmgha7ig31p4ri2rlnqyjlxi5l8hyq"; depends=[]; }; cromwellDashboard = derive2 { name="cromwellDashboard"; version="0.5.1"; sha256="0d57c1wdd1ds9fr7p256la63qbv8mirljgrvl1k8fp5gcnkps5wb"; depends=[dplyr DT httr shiny shinydashboard stringr]; }; - cronR = derive2 { name="cronR"; version="0.4.2"; sha256="0yydm8whwzb3iclg9a8xq0xh4l7vgi6d84r20yvkh6fqzl7vy2nm"; depends=[digest]; }; + cronR = derive2 { name="cronR"; version="0.6.0"; sha256="0y56d4hxd73w6gk6byp4dn9bx9jra2882h09gj9wksc6hqags5m7"; depends=[digest]; }; crone = derive2 { name="crone"; version="0.1.1"; sha256="03qznxml940rl3kfxy4jkg9nsx9ss0gf2ck0ry000xglw6rm2s42"; depends=[]; }; cronologia = derive2 { name="cronologia"; version="0.2.0"; sha256="143wc9i9d99cybnjzg4dj7jn7sv3cc4bq3hh6mp50j9hwxnr1xhh"; depends=[glue htmltools]; }; crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; }; cropDemand = derive2 { name="cropDemand"; version="1.0.1"; sha256="0h4blvddk2ma3dm1k9r8gl54fg384r214hsx31w1qndwcj7gfpbh"; depends=[dplyr ggplot2 ncdf4 raster rgdal tidyr]; }; cropZoning = derive2 { name="cropZoning"; version="1.0.1"; sha256="19082p5c322m684fkjcxa1bcmk3vzga2x75lid9zrsrh6knrqsbz"; depends=[ggplot2 ncdf4 raster rgdal tidyr]; }; cropdatape = derive2 { name="cropdatape"; version="1.0.0"; sha256="19bn0apx4p8hnz388zg7sq59qv89vv8k5php317kcv7ai2k2gh34"; depends=[]; }; + cropgrowdays = derive2 { name="cropgrowdays"; version="0.1.0"; sha256="0q1zybx84mn8kiq5wn1hs3sc4xnk6r45shzddz27qkm6b1c4grbg"; depends=[dplyr httr lubridate magrittr purrr purrrlyr tibble]; }; crossReg = derive2 { name="crossReg"; version="1.0"; sha256="1866jhfnksv9rk89vw7w4gaxi76bxfjvqxx7cfa8nlrcsmaqd7rf"; depends=[]; }; crossdes = derive2 { name="crossdes"; version="1.1-1"; sha256="1d7lv3ibq1rwxx8kc3ia6l9dbz2dxdd5pnf2vhhjmwm448iamcfd"; depends=[AlgDesign gtools]; }; crossmap = derive2 { name="crossmap"; version="0.3.0"; sha256="0dw1sg1by5805l72s5sbldznyp9qph9qrm4sizvqdx74bhb59s1y"; depends=[backports broom dplyr purrr rlang]; }; @@ -7284,12 +7565,12 @@ in with self; { crossrun = derive2 { name="crossrun"; version="0.1.0"; sha256="0br57nraqhs5f1cpidc8kd31izm82wvhiw9pxcdj9v51l9vifbmx"; depends=[Rmpfr]; }; crosstable = derive2 { name="crosstable"; version="0.2.1"; sha256="185rf1p8sv3z3vf327rr8nd4zaawy95fgs0yi6kr2v3pdcfrz9sd"; depends=[checkmate dplyr ellipsis flextable forcats glue lifecycle nortest officer purrr rlang stringr survival tibble tidyr tidyselect]; }; crosstalk = derive2 { name="crosstalk"; version="1.1.1"; sha256="1n6c6s7a6yxiwvva71x6bzcrim8xprl5s01fqiy61yq0y3vk8cpd"; depends=[htmltools jsonlite lazyeval R6]; }; - crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; + crossval = derive2 { name="crossval"; version="1.0.4"; sha256="0vshlyc6w4kfs03n56ylapiqgdyday7068wmfsphj4lhw322s4yp"; depends=[]; }; crosswalkr = derive2 { name="crosswalkr"; version="0.2.6"; sha256="1rxd6vy7vdrawmg7zkydl1f2wwklnzgh9dsnxbg966xrr3l9x1n9"; depends=[haven labelled readr readxl tibble]; }; crossword_r = derive2 { name="crossword.r"; version="0.3.6"; sha256="1s31613s4qxxspka9bhgq3rq8xraf48mwfv6phvz6v06gijh64lr"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; crov = derive2 { name="crov"; version="0.2.0"; sha256="1i3a5nagzinsla6p3wjyj3x12gyfqs6vapaqxgr3dh6m727jw5i5"; depends=[gtools VGAM]; }; crplyr = derive2 { name="crplyr"; version="0.3.8"; sha256="0vfr8pdxpcmfslv7kn0jhcxjxkhhsqhy729h6v22bazp56zam08v"; depends=[crunch dplyr ggplot2 httptest lazyeval lifecycle purrr rlang scales stringr tibble tidyselect viridisLite]; }; - crqa = derive2 { name="crqa"; version="2.0.1"; sha256="04qzg4i3w5wqk1mp9gi90149hfjc7mpqpdwljrafnrv5jfgpjmyi"; depends=[FSA gplots Matrix plot3D pracma rdist tseriesChaos]; }; + crqa = derive2 { name="crqa"; version="2.0.2"; sha256="0dg2aqc4dc27chwqym23r2ajqk4vjgi73qdv6i4zmra4rf4s0md5"; depends=[FSA gplots Matrix plot3D pracma rdist tseriesChaos]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; @@ -7299,63 +7580,72 @@ in with self; { crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crso = derive2 { name="crso"; version="0.1.1"; sha256="1r10vz8z5y52a5v5phw22fhqwv9p7g66xfsx0906bcx74dn3f2b3"; depends=[foreach]; }; crsra = derive2 { name="crsra"; version="0.2.3"; sha256="1rkqm88zmvp9gw442cby6qpvfw4pfw65wz0gyl2h37w87c3wwvrw"; depends=[digest dplyr knitr purrr rcorpora readr tibble tidytext]; }; + crsuggest = derive2 { name="crsuggest"; version="0.3.1"; sha256="13h6hfj3bvdb5wzq1f2m5s9crjmg0ijhfh87y1dmyimv76kr31k6"; depends=[dplyr mapview purrr sf units]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; crul = derive2 { name="crul"; version="1.1.0"; sha256="1kjsc5gkx5k5cfwlfjp2cjm9cdzq2l1m68bnrjmahw3lkz8wzdph"; depends=[curl httpcode jsonlite mime R6 urltools]; }; - crunch = derive2 { name="crunch"; version="1.28.0"; sha256="140midzj80y9a46ixi6hn836s5g8bi4kds5sgrk4az79mh9lxwk0"; depends=[abind crayon curl httpcache httr jsonlite]; }; + crunch = derive2 { name="crunch"; version="1.28.1"; sha256="14hc6cgxcd6k30x0bf7az025piiw1brcv5vdkc1p52z4h5by12xy"; depends=[abind crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.3.3"; sha256="15w72kmizsxkj1wx3nqny6329m2041mxyzi4nxh8l3hfmaisb4qm"; depends=[crunch httpcache miniUI rstudioapi shiny]; }; cruts = derive2 { name="cruts"; version="1.1"; sha256="1ih6h9qk4yflzars00d61smjqj7s4bfvc2ikp6vlki9f6k012xcx"; depends=[lubridate ncdf4 raster sp stringr]; }; cry = derive2 { name="cry"; version="0.4.1"; sha256="14wicmlg8vzrqv4wf5xzf37l29ch3cbglbanmgbqdi8p49jpw1cf"; depends=[zoo]; }; + crypto2 = derive2 { name="crypto2"; version="1.3.0"; sha256="06jja7jl942zzs4pv9k7pfbllxdn6lh59h86dri1lnyglr7syy9j"; depends=[cli dplyr jsonlite lubridate progress purrr tibble tidyr]; }; + cryptowatchR = derive2 { name="cryptowatchR"; version="0.2.0"; sha256="0lf94l5klkx1j1fgaq2qjqr2y8ckm5raa3a508x72ph45v10pfyq"; depends=[httr jsonlite lubridate]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csa = derive2 { name="csa"; version="0.7.0"; sha256="0cmabcvfxfplnzx7mdsfas3jhgz44y86411amaphm75zmv8khcif"; depends=[data_table doParallel foreach ggplot2 ggpubr Lmoments moments raster reshape2 scales]; }; csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; }; csampling = derive2 { name="csampling"; version="1.2-2.1"; sha256="0kqx7j96yafsqi9cz551fqpwkbcabxl8zpwa2jms862z41xbgsv3"; depends=[marg statmod survival]; }; csci = derive2 { name="csci"; version="0.9.3"; sha256="00s1gx5h141w1vjw8j3k7bn71c4dy80m6wakd1c1z7rmx1jbfp6m"; depends=[exactci]; }; - cshapes = derive2 { name="cshapes"; version="0.6"; sha256="0mp6grkibmqk4k1yi4w2sglpp9ari5cfw4iip49a0z58qa98npw7"; depends=[maptools plyr sp]; }; + cshapes = derive2 { name="cshapes"; version="2.0"; sha256="0c3q85whvp28zlm4k1570kwc5qvl2fmaszx9dpmfcdqv6m19f9ks"; depends=[rmapshaper sf sp]; }; csn = derive2 { name="csn"; version="1.1.3"; sha256="102w1qh9hgz4j9lh5hnbw1z3b7p034si73q4pkk564a2mhzlksw4"; depends=[mvtnorm]; }; - csodata = derive2 { name="csodata"; version="1.1.1"; sha256="0h43psxas3js43p0qpvw225cxxfr444d91y282jvi7d9cs8mkxfg"; depends=[dplyr httr jsonlite R_cache reshape2 rjstat sf]; }; cspec = derive2 { name="cspec"; version="0.1.2"; sha256="049vynbffxyd5zwxwyz1jv05zgq7zrx1ypzv5j62ph64gl42m13p"; depends=[]; }; cspp = derive2 { name="cspp"; version="0.3.1"; sha256="17zcf91wcvc5lq1vw24jf4dripnbv19lq4pch09livlyi9xjrx2p"; depends=[csppData dplyr ggplot2 haven mapproj purrr readr rlang stringr tidyselect]; }; - csppData = derive2 { name="csppData"; version="0.1.2"; sha256="1xfwrrs0jgisrxk5j06a2nniml8w8fvjcq30in1vg23svix21zlk"; depends=[]; }; + csppData = derive2 { name="csppData"; version="0.1.3"; sha256="0agzjkvkhiy2fpdv9is50mcs81yzw3knr2iwjv63hscvy791dkp4"; depends=[]; }; csrplus = derive2 { name="csrplus"; version="1.03-0"; sha256="0kljndmiwblsvvdnxfywida9k0dmdwjq63d934l5yl6z7k4zd0xa"; depends=[sp]; }; cssTools = derive2 { name="cssTools"; version="1.0"; sha256="1p8c21c1hilmd9ibqyz493fy1x95hb2pidybsyicch53gkb542br"; depends=[sna]; }; cstab = derive2 { name="cstab"; version="0.2-2"; sha256="1lr401fvi88f4jv8jh4brx95ymncfw8clripz1r6a46inj80nj4j"; depends=[cluster fastcluster Rcpp]; }; cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; }; - csv = derive2 { name="csv"; version="0.5.9"; sha256="1x2z1blb8rwnhl8nvx9y0c1qqca9402xpqc2wkbkz47lppgmvzfw"; depends=[data_table stringi]; }; + csurvey = derive2 { name="csurvey"; version="1.2"; sha256="199k56rc881zdwh589m238qqwkgcx9qqnvxijk23xwf97bbjcr0l"; depends=[coneproj MASS Matrix purrr survey]; }; + csv = derive2 { name="csv"; version="0.6.1"; sha256="0rl9yd63mjzhpvaipl45zlm3s1cg31cvnala7ayy8dh5mpdds3hn"; depends=[data_table stringi]; }; csvread = derive2 { name="csvread"; version="1.2.1"; sha256="1r9jvf7nbkxgl6dycdnb89yh39vacrzy8z04g8qz225rklg5b288"; depends=[]; }; + csvwr = derive2 { name="csvwr"; version="0.1.5"; sha256="050gr0kqx2rjlh20b7yvk1sh175jbj1lyfd5yryy2l5xrl8dkgd9"; depends=[jsonlite magrittr purrr readr rlang stringr]; }; csvy = derive2 { name="csvy"; version="0.3.0"; sha256="0id015szw1c63vd1h0515jsqdhyn32sxpxm89f3sb1qkgq3yynmy"; depends=[data_table jsonlite yaml]; }; + cta = derive2 { name="cta"; version="1.3.0"; sha256="1i8psw6p6f4633ad17apm6v5ikrpv1dagm0s8pggpsjbbw8d655v"; depends=[intervals limSolve numDeriv]; }; + ctf = derive2 { name="ctf"; version="0.1.0"; sha256="1vwqfh1y2if79rkpy6b0ay50fyis7h5rlpvhgikahnmcr2q5l14m"; depends=[iotools jsonlite]; }; ctgdist = derive2 { name="ctgdist"; version="0.1.0"; sha256="1m3ryppfvd984n5xfphjqhi9i1sigl17v897mqaichj21dzaq62f"; depends=[mirt]; }; - ctgt = derive2 { name="ctgt"; version="1.0"; sha256="0iznqskyi80xs8xn2hrrlal9qz9cwq6m9ml6wfwyynbzgn7vmvvh"; depends=[BH Rcpp]; }; + ctgt = derive2 { name="ctgt"; version="2.0"; sha256="0g2ibk9pxay0idj55q0yh4vbdb6l6460r997fnapimn7fgyz6f66"; depends=[BH Rcpp]; }; cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; }; ctl = derive2 { name="ctl"; version="1.0.0-4"; sha256="027cij4vdsq3xhi38izzn07q6xwja7n8v95l7kk1pp92y9qkvqv3"; depends=[MASS qtl]; }; ctmcd = derive2 { name="ctmcd"; version="1.4.1"; sha256="01nflgdyb70kh4f8bnxpavr31fz4fh02kgz2nlx3zzblnm2idbcx"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; ctmcmove = derive2 { name="ctmcmove"; version="1.2.9"; sha256="1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0"; depends=[fda gdistance Matrix raster sp]; }; ctmle = derive2 { name="ctmle"; version="0.1.2"; sha256="0qc1ji8fjpr88dn6mrpijfcx1ij4zkrxsbcw405hxal7rli0gyp3"; depends=[glmnet SuperLearner tmle]; }; - ctmm = derive2 { name="ctmm"; version="0.6.0"; sha256="0z0dg4kd2w2jk6xmr9w2q78d6zky5mn3pp0bk71084q00hxfqbc9"; depends=[Bessel data_table digest expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp statmod]; }; + ctmm = derive2 { name="ctmm"; version="0.6.1"; sha256="1c0pxjm91xcjdhq7mdjgmay9vs8cmk24495sf9g67hfjplf5gzzm"; depends=[Bessel data_table digest expm fasttime Gmedian gsl manipulate MASS numDeriv pbivnorm pracma raster rgdal shape sp statmod]; }; ctqr = derive2 { name="ctqr"; version="2.0"; sha256="0srrlgqxpp4a46wqr83zpb3xr49pf70b0n8bv9qp8ffak20d2hpj"; depends=[pch survival]; }; - ctrdata = derive2 { name="ctrdata"; version="1.5.3"; sha256="108j6k8mnnmw4jxrqzdykb7d78pck33wzaz6vvg3q4nyhdddjvln"; depends=[clipr curl DBI httr jsonlite nodbi rvest stringi xml2]; }; + ctrdata = derive2 { name="ctrdata"; version="1.7.1"; sha256="1fr41yfjsywbrbwly93k3xvlc2fhfmw2d2garx387hl2kg6yl6n0"; depends=[clipr curl httr jsonlite nodbi rvest stringi xml2]; }; ctrlGene = derive2 { name="ctrlGene"; version="1.0.1"; sha256="0x7j11v7jj4k1jml6lrnjq79awhrvsm3pig1yxsd337jlfml3ra9"; depends=[psych]; }; - ctsem = derive2 { name="ctsem"; version="3.4.3"; sha256="0km7d1jlpvzap80fzqj0v639vzwrjkayg06l9nh4lwx24drq1hzv"; depends=[BH cOde data_table Deriv expm ggplot2 MASS Matrix mize mvtnorm pkgbuild plyr Rcpp RcppEigen RcppParallel rstan StanHeaders tibble]; }; - ctsemOMX = derive2 { name="ctsemOMX"; version="1.0.3"; sha256="1va9p3c4f4m61ny9c8wlvsz045k1ara4j4wsi7w1ywrjjmqczjw6"; depends=[ctsem Matrix OpenMx plyr]; }; + ctsem = derive2 { name="ctsem"; version="3.5.4"; sha256="1gzv3i43nknd2fkjhrgwq8kf5z5vl52k5715sjzad9bmdjqf9wdl"; depends=[BH cOde data_table Deriv expm ggplot2 MASS Matrix mize mvtnorm pkgbuild plyr Rcpp RcppEigen RcppParallel rstan StanHeaders tibble]; }; + ctsemOMX = derive2 { name="ctsemOMX"; version="1.0.4"; sha256="1sjsm573alsg3dvj58rwknqapcydx77zbs0b8hcf59qbbhfa3djv"; depends=[ctsem Matrix OpenMx plyr]; }; ctv = derive2 { name="ctv"; version="0.8-5"; sha256="0kl6z8dbbjgm29q0c5xy6lihjgf5cdihrllm27x0zbcvy8lyl51p"; depends=[]; }; cuRe = derive2 { name="cuRe"; version="1.0.1"; sha256="0vw2iv9inz8md7lz6f1p456wxjc07kap1mvqf58hixqxbrb23dgi"; depends=[date numDeriv relsurv rstpm2 statmod survival]; }; - cubature = derive2 { name="cubature"; version="2.0.4.1"; sha256="006la36gxdikvmdnq4ny7ik7r30id4z3b3fqsl57dpqwkpsbsgrq"; depends=[Rcpp]; }; + cubature = derive2 { name="cubature"; version="2.0.4.2"; sha256="0kk9lw3s66h0sayza3in8rdj7bmgqn4v5lfckhslarpvj2fxsnv0"; depends=[Rcpp]; }; cubelyr = derive2 { name="cubelyr"; version="1.0.1"; sha256="1g3pvam1fkqh63snibqcfaazvj7lrkfip8w9pjvwdclj0l8382kl"; depends=[dplyr glue pillar purrr rlang tibble tidyselect]; }; cubeview = derive2 { name="cubeview"; version="0.2.0"; sha256="1352hi2j9x9rx4iy3xvsca86nsh39x1vnymd17f5qc8c3plfm8db"; depends=[base64enc htmltools htmlwidgets lattice raster stars viridisLite]; }; cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; }; + cubicBsplines = derive2 { name="cubicBsplines"; version="1.0.0"; sha256="1dzwadhhrxgral9x4hxyyy1fyn45pmbwv6wiwfxhivkxmd3s2xdr"; depends=[]; }; cubing = derive2 { name="cubing"; version="1.0-5"; sha256="1q23fplvklaaldicqic0zpnh301m08zb9k21l47zj47g9m9pj4bc"; depends=[rgl]; }; cultevo = derive2 { name="cultevo"; version="1.0.2"; sha256="0rmncp4mrdpf3izhhqn9406i36j3d3d7i8cglip04lkfbypl9jvy"; depends=[combinat Hmisc pspearman stringi]; }; cumSeg = derive2 { name="cumSeg"; version="1.3"; sha256="0n1hp0abnd6zn72fkgkj9k875vivn5kr3q76sjy6q6va7x24j6sg"; depends=[lars]; }; - cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; + cuml = derive2 { name="cuml"; version="0.2.1"; sha256="1dmk1gvvzkwfra63qslax9cgqjbsiqam5wcjl955wpb0wdqpa54k"; depends=[ellipsis hardhat magrittr parsnip Rcpp rlang]; }; + cuml4r = derive2 { name="cuml4r"; version="0.1.0"; sha256="0zwm8laprwhkjn2ji16f08952hri3bk1qvpj8yhwaqiv4cj2q43k"; depends=[magrittr Rcpp rlang zeallot]; }; cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; cumulocityr = derive2 { name="cumulocityr"; version="0.1.0"; sha256="0ybvh5args3s1f3nra58bnfwgrlrdpw40by68az84s90v88bbz2q"; depends=[httr jsonlite]; }; - cuperdec = derive2 { name="cuperdec"; version="1.0.0"; sha256="065j9l18bq8rdxqkrp1v9bl21jc66pa7skds13xrjsp8a0r7vkmk"; depends=[dplyr ggplot2 magrittr readr rlang tidyr]; }; - curephEM = derive2 { name="curephEM"; version="0.1.6"; sha256="18lr4fq7nim9axxg9kvivgs3hvmkqnp15sn30vqdbl545a4h78yy"; depends=[Matrix survival]; }; - curl = derive2 { name="curl"; version="4.3.1"; sha256="0qpzbzd5xvihqvp9akkvd8237i1lmphmm5q8a4cj3wfx382cnri2"; depends=[]; }; + cuperdec = derive2 { name="cuperdec"; version="1.1.0"; sha256="1vvkbkb3dp38xzxxdm20n6vr8yifppn1clzzcvb2rhqk9d17cdiw"; depends=[dplyr ggplot2 magrittr readr rlang tidyr]; }; + curephEM = derive2 { name="curephEM"; version="0.2.3"; sha256="0vn51v752acsr1vl65nixzdp0rchakgmrj2vz8krq66b3nys4wyw"; depends=[Matrix survival]; }; + curl = derive2 { name="curl"; version="4.3.2"; sha256="0s55022hy8shjm1pzax1dqzrg20bv4nvlwnjnddk3dp89g5zmcch"; depends=[]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; cursr = derive2 { name="cursr"; version="0.1.0"; sha256="08051bnxags2arn296mxwc84j55shhsfym9hd062amdvm23nxd18"; depends=[keypress]; }; curstatCI = derive2 { name="curstatCI"; version="0.1.1"; sha256="0igqdv0fzzji10gz3j3ir8qxpy7vdjfl137067rc28qzbrl2sy2c"; depends=[Rcpp]; }; + curtailment = derive2 { name="curtailment"; version="0.1.1"; sha256="0qvk9sib2ywqfx4cfs6kqvfphngvsqgvwlqmlipj4pvwpcbkn6wd"; depends=[data_table ggplot2 ggthemes gridExtra pkgcond]; }; curvHDR = derive2 { name="curvHDR"; version="1.2-1"; sha256="1a6b29kklyphv9iirm8xaxcdfcssk7ah4wm9ll53ls0alnzb15nw"; depends=[feature geometry hdrcde KernSmooth ks misc3d ptinpoly rgl]; }; curveDepth = derive2 { name="curveDepth"; version="0.1.0.9"; sha256="10mhy2nyll4d1q71qnlsal0raccz3awd0j0vi5w58di9wlv1c241"; depends=[ddalpha Rcpp RcppArmadillo]; }; curvecomp = derive2 { name="curvecomp"; version="0.1.0"; sha256="0ykgbwnh32w61cjcg1nyqak42hx0jrsrpbra2wh3pgj9clg1qad2"; depends=[multcomp]; }; @@ -7365,68 +7655,75 @@ in with self; { cusum = derive2 { name="cusum"; version="0.4.1"; sha256="0vjq3slkjdgls41xm637xkrg8jhv6y75xiyfcgpwrp32ixmakpcd"; depends=[checkmate data_table Rcpp]; }; cutoff = derive2 { name="cutoff"; version="1.3"; sha256="0anrvmlvcxah620il3fkq6ldp7hx4nwdnzcpmfc5mhlsry0lp178"; depends=[do ROCit set survival]; }; cutoffR = derive2 { name="cutoffR"; version="1.0"; sha256="1801jylmpp4msyf07rhg4153kky1zvi4v0kkjb9d51dc7zkhh531"; depends=[ggplot2 reshape2]; }; - cutpointr = derive2 { name="cutpointr"; version="1.1.0"; sha256="1qaz7kjvpy0by5hxdbpslnq7ivs9jr825hbgiz0ack3h9ks6akl2"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr tidyselect]; }; + cutpointr = derive2 { name="cutpointr"; version="1.1.1"; sha256="1lcs4dv13y9q6iwan7livlfaf5bqgg116br1knm4wk56jhxjaf4k"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr tidyselect]; }; cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; - cvCovEst = derive2 { name="cvCovEst"; version="0.3.5"; sha256="0l2s95djlh90qk7s6940fafcqfcrdqxv05g60nnbz6hn2lj2svgj"; depends=[assertthat coop dplyr ggplot2 ggpubr Matrix matrixStats origami purrr RColorBrewer Rdpack rlang RSpectra stringr tibble]; }; + cvCovEst = derive2 { name="cvCovEst"; version="1.0.0"; sha256="1grnhrrlmgr4zzs4cma9riys2sv6ndrqnfn7kx3qc1xzm137jd25"; depends=[assertthat coop dplyr ggplot2 ggpubr Matrix matrixStats origami purrr RColorBrewer Rdpack rlang RSpectra stringr tibble]; }; cvGEE = derive2 { name="cvGEE"; version="0.3-0"; sha256="085qjm520l2441nakfxy851s6bfy5832b5fy54z5fp4xr1jn6snm"; depends=[]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; + cvam = derive2 { name="cvam"; version="0.9.0"; sha256="04r4axawgd5gl09ccp8bd986jb3sigmg5hkgfl2qjdbsnslp4f08"; depends=[coda Formula]; }; cvar = derive2 { name="cvar"; version="0.4-0"; sha256="1rfsmw2a639pkj8l5g2xm6z48jrxsywbysk7c0czpdvrh4h9h84f"; depends=[fGarch gbutils Rdpack]; }; cvcqv = derive2 { name="cvcqv"; version="1.0.0"; sha256="0327r4jw6m4avcz1zvdkxszqwaw2s9sh1i1jagl6aggd7aaiiyg0"; depends=[boot dplyr MBESS R6 SciViews]; }; cvcrand = derive2 { name="cvcrand"; version="0.1.0"; sha256="0zdf41sjqyi7mybxhypfx1vpc15w7qj9jg9bav64qbk0q5nk7jyc"; depends=[tableone]; }; cvequality = derive2 { name="cvequality"; version="0.2.0"; sha256="1im839vzfqylphp2vr20avnzkyl02n88fngbs63d4ik7c72d9992"; depends=[]; }; cvmdisc = derive2 { name="cvmdisc"; version="0.1.0"; sha256="19b9kxqgbk1d631l3jph87pzhk4zf3xd5q5j2xsrbqz8zmm96sn9"; depends=[CompQuadForm]; }; cvmgof = derive2 { name="cvmgof"; version="1.0.3"; sha256="0s78w8ivxzscn6jbwsw0m15n3xwgbbjdqwpp4dsy3gi0nsmngjyc"; depends=[lattice]; }; - cvms = derive2 { name="cvms"; version="1.2.1"; sha256="02rjr5hi4dly4vxj0vi49ml8x5isniaj61cdj6rxhy9b75bkb20i"; depends=[broom broom_mixed checkmate data_table dplyr ggplot2 lifecycle lme4 MuMIn plyr pROC purrr recipes rlang stringr tibble tidyr]; }; + cvms = derive2 { name="cvms"; version="1.3.1"; sha256="1r2b325bwhdr76rk38qygln806wxkl67lb8i3kw5ahd5w38n7n6i"; depends=[checkmate data_table dplyr ggplot2 lifecycle lme4 MuMIn parameters plyr pROC purrr rearrr recipes rlang stringr tibble tidyr]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; + cvwrapr = derive2 { name="cvwrapr"; version="1.0"; sha256="17h017p76y7sjcwik48ravygmyivj6kvkhqy5s9ch0nwzzcrzvj3"; depends=[foreach survival]; }; + cwbtools = derive2 { name="cwbtools"; version="0.3.4"; sha256="1wj42n6phniwh6ms5xfmfazd8a0lkaf46wzv916i9xzsaf6hzqr7"; depends=[cli curl data_table fs httr jsonlite lifecycle pbapply R6 RcppCWB rstudioapi stringi xml2 zen4R]; }; cwhmisc = derive2 { name="cwhmisc"; version="6.6"; sha256="1pf365g4f51cfrhlff9mqw2ddvkps0abax17zcn3vw1ba2djalnp"; depends=[lattice]; }; cwm = derive2 { name="cwm"; version="0.0.3"; sha256="1ln2l12whjhc2gx38hkf3xx26w5vz7m377kv67irh6rrywqqsyxn"; depends=[MASS matlab permute]; }; cxhull = derive2 { name="cxhull"; version="0.2.0"; sha256="1m03ym83ghgmb0j14aihfj6divmnr13f5s9jwknicjsxz3p3divk"; depends=[]; }; cxr = derive2 { name="cxr"; version="1.0.0"; sha256="12rx7hna3h84a2xb2ir43xgb3zfmh0fhn5wcdjklk2g94dmwid28"; depends=[mvtnorm optimx]; }; cxxfunplus = derive2 { name="cxxfunplus"; version="1.0"; sha256="0kyy5shgkn7wikjdqrxlbpfl3zkkv4v1p8a1vv0xkncwarjs4n8d"; depends=[inline]; }; cycleRtools = derive2 { name="cycleRtools"; version="1.1.1"; sha256="1l7w2lm4s149ndd85v41pkdrdig6l3nmhl14bdx56aw8q57fxmb0"; depends=[Rcpp xml2]; }; - cyclestreets = derive2 { name="cyclestreets"; version="0.3.0"; sha256="1hkmibl8dv99q6dl6xvzvjm96g4b9v364mbdffrxm6ncvzg6rfri"; depends=[geodist httr jsonlite magrittr sf stringr]; }; + cyclestreets = derive2 { name="cyclestreets"; version="0.5.0"; sha256="1a7b28832w1qjqfr6i8apki01y53fq9nwg2bjzgyly363b0aghq4"; depends=[geodist httr jsonlite magrittr sf stringr]; }; cyclocomp = derive2 { name="cyclocomp"; version="1.1.0"; sha256="0gky3svk02wiajw7nfjh30684h3qxili4bvsab0m7b6cggw6bgyd"; depends=[callr crayon desc remotes withr]; }; cycloids = derive2 { name="cycloids"; version="1.0"; sha256="00pdxny11mhfi8hf76bfyhd1d53557wcbl2bqwjzlpw5x3vdnsan"; depends=[]; }; cyclomort = derive2 { name="cyclomort"; version="1.0.2"; sha256="0qmfwhrp7bq7av0yc95xnz2sd1jxfaiys9smrk1kpclnynnra9rr"; depends=[flexsurv lubridate magrittr mvtnorm plyr scales survival]; }; + cylcop = derive2 { name="cylcop"; version="0.1.0"; sha256="1cj76614jqvs2k5n5lbws0jgabr93yd6nvzr4zkgh9zdicxh731h"; depends=[circular copula cowplot data_table dplyr extraDistr ggplot2 GoFKernel infotheo MASS movMF mvtnorm plotly purrr Rdpack rgl rlang stringr viridis]; }; cymruservices = derive2 { name="cymruservices"; version="0.5.0"; sha256="1xhdvijybdy7312qdbp50881yix587pmym0hchnwb3h0vhjv553v"; depends=[memoise pingr stringi]; }; cyphid = derive2 { name="cyphid"; version="1.1"; sha256="0ya9w8aw27n0mvvjvni4hxsr4xc8dd08pjxx7zkfl1ynfn5b08am"; depends=[fda]; }; - cyphr = derive2 { name="cyphr"; version="1.1.0"; sha256="03w26b5vvy9zwzp001g0lpwcndwqdsfsz80x11kik0cih1g8apsw"; depends=[getPass openssl sodium]; }; + cyphr = derive2 { name="cyphr"; version="1.1.2"; sha256="1nbl10yackgbqjx42lgkyb74d1swa9yzbanyk3wa4b0xcqf5iv3g"; depends=[getPass openssl sodium]; }; cystiSim = derive2 { name="cystiSim"; version="0.1.0"; sha256="0pz8jxi4lgcwzrb4dh8xn63xhpaga5rzg5hwqicwv8isc16iqizd"; depends=[ggplot2 knitr magrittr]; }; cytoDiv = derive2 { name="cytoDiv"; version="0.5-3"; sha256="00c0gqgypywgbhavb15bvj6ijrk4b5zk86w85n9kwr4069b7jvwc"; depends=[GenKern plotrix]; }; cytofan = derive2 { name="cytofan"; version="0.1.0"; sha256="0gqs98mnwiawnyfb9hs5nlin8d1fj64bszn4b40gs8ajyh36r9pp"; depends=[ggplot2 RColorBrewer]; }; cytometree = derive2 { name="cytometree"; version="2.0.2"; sha256="18g7av73lmnyga1kk24bf8jy599zn9n6qhr13mxsqgi0zdinicfa"; depends=[cowplot ggplot2 GoFKernel igraph mclust Rcpp RcppArmadillo]; }; cytominer = derive2 { name="cytominer"; version="0.2.2"; sha256="1n9yimjhdziv1vzjyni6ssi38nxcnfr5jpmzgxcn6vysffh5s9pz"; depends=[caret doParallel dplyr foreach futile_logger magrittr Matrix purrr rlang tibble tidyr]; }; - czechrates = derive2 { name="czechrates"; version="0.1.10"; sha256="0xxp61bgb2knc0cnab0c3iq92i251iic9awih557phyljb1f2z8p"; depends=[curl dplyr httr magrittr readr tibble]; }; - czso = derive2 { name="czso"; version="0.3.4"; sha256="1aiwly7426mx8yvp30w2jf88hv5a7k1qgbcxvka33mzpm3c8gzgs"; depends=[curl dplyr httr jsonlite lifecycle magrittr readr rlang stringi stringr tibble usethis]; }; + czechrates = derive2 { name="czechrates"; version="0.2.2"; sha256="162r9inbjkgfm3y73jb3d9pxmgid94jjy5kxjp7058jsiv2ibn05"; depends=[curl dplyr httr magrittr readr tibble tidyr]; }; + czso = derive2 { name="czso"; version="0.3.5"; sha256="0wa6nyass4my3kw8mp44cw5gxswvk5zg8n9xb64xb330pvy3pf73"; depends=[curl dplyr httr jsonlite lifecycle magrittr readr rlang stringi stringr tibble usethis]; }; d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; }; d3Tree = derive2 { name="d3Tree"; version="0.2.2"; sha256="142bc6gdmhzaikdfyxb1pq9nlybgkrgi2kjgk40w4wbxzx5mwkbh"; depends=[dplyr htmlwidgets magrittr plyr stringr]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; - d3r = derive2 { name="d3r"; version="0.9.1"; sha256="0kc82vvyfxhxvqfalngn36prn3sxdiinsx04rn99ha6zdc27zp5k"; depends=[dplyr htmltools rlang tidyr]; }; + d3po = derive2 { name="d3po"; version="0.3.2"; sha256="0qhdk2ap9bkf4xfbpyh1k6s2kb6lgr2vgn5ns228vrckghwxhkri"; depends=[assertthat dplyr htmlwidgets magrittr purrr rlang]; }; + d3r = derive2 { name="d3r"; version="1.0.0"; sha256="1qijkllfaaw0lb29j8mappm8jz9kg8gkihxq5wqhb4gabsazdwva"; depends=[dplyr htmltools rlang tidyr]; }; dBlockmodeling = derive2 { name="dBlockmodeling"; version="0.2.0"; sha256="0c1hvawb9gw6vckims3g8kzn2c4f0as5x1vw39sdvkwc92xy26lv"; depends=[]; }; dCUR = derive2 { name="dCUR"; version="1.0.0"; sha256="12i2qcjq9i1ycs6z6g3yr1imv7v4g19kdhf1vg9xkvh43pagb6h7"; depends=[dplyr ggplot2 magrittr MASS mclust ppcor Rdpack stackoverflow]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; - dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; + dCovTS = derive2 { name="dCovTS"; version="1.2"; sha256="0gzilpz2hwibvwjpndi2nw61knhi4v0bhz5z4idffszgc9mjw1wm"; depends=[dcov doParallel foreach Rfast Rfast2]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.1"; sha256="1c1xz1f1fp937w4rlylvqv3ii0p9dafvmn4fqq8rzxhcg5rn9j4l"; depends=[Rcpp]; }; - dLagM = derive2 { name="dLagM"; version="1.1.4"; sha256="1qc8l6971khz76n9i3wvn6j9mkd9lp35qvnxw1chhprbl1ps4h4w"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll sandwich strucchange wavethresh]; }; + dLagM = derive2 { name="dLagM"; version="1.1.6.2"; sha256="0hh9nyk5x0yzy2l8gnjn0zkq3xx26pdlvk8myl7ma4y0qyk77587"; depends=[AER dynlm formula_tools lmtest MASS nardl plyr roll sandwich strucchange wavethresh]; }; dMod = derive2 { name="dMod"; version="1.0.2"; sha256="1fnv3f5xlng8f3df5hvxncfnnadzwcsdiklrb2g67llf3m06bq74"; depends=[cOde deSolve doParallel dplyr foreach ggplot2 plyr rootSolve stringr]; }; - dPCP = derive2 { name="dPCP"; version="1.0.3"; sha256="1gqd6a1kbzp1433k99l11gvxx11c475f33cpg7138yiiik2lp5s6"; depends=[dbscan e1071 exactci ggplot2 ggpubr raster rlist scales shiny shinyjs stringr]; }; + dPCP = derive2 { name="dPCP"; version="1.0.4"; sha256="1wxni1m9iaak0isc1sl205dnx3v8pzqyj22aj7alzwim6d6a4hjq"; depends=[dbscan e1071 exactci ggplot2 ggpubr raster rlist scales shiny shinyjs stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; daarem = derive2 { name="daarem"; version="0.5"; sha256="167sqp7fnyhwgk7crl3b6m6i8mpn3hmsaqzi4v5ggi48fg19bis7"; depends=[]; }; dabestr = derive2 { name="dabestr"; version="0.3.0"; sha256="0i4k8h46cw5ds1cammxxli8kpc82ill81xw3izi33lja7wl9vmnw"; depends=[boot cowplot dplyr effsize ellipsis forcats ggbeeswarm ggforce ggplot2 magrittr plyr RColorBrewer rlang simpleboot stringr tibble tidyr]; }; - dabr = derive2 { name="dabr"; version="0.0.2"; sha256="0j6mmr2qvz51g7jjmysqy7sdshnm8y2q4k2zarl6ja6mvi9i65jv"; depends=[knitr RMariaDB]; }; - dad = derive2 { name="dad"; version="3.4.6"; sha256="0k6w36c4f9icjx1ywdfg8i7hk7yiaq5c979is3146id1bz4fxfxj"; depends=[DescTools e1071 ggplot2]; }; + dabr = derive2 { name="dabr"; version="0.0.3"; sha256="1x7vh5s2gd7x62c30hqhs6rbif9jpmfvqzlxlqwc6hc5wqd3x6q6"; depends=[knitr magrittr RMariaDB tibble]; }; + dad = derive2 { name="dad"; version="4.0.0"; sha256="154afqf3xwbdjp9qr3rlz06ln2cnwzafk3p9h73k0h2g5n8yp5b9"; depends=[DescTools e1071 ggplot2]; }; dadjoke = derive2 { name="dadjoke"; version="1.0"; sha256="118pacwc2qb3c5zbhr71zf4zj1ab2g4rs5h6bvrscjyd7a71jc3f"; depends=[]; }; dadjokeapi = derive2 { name="dadjokeapi"; version="1.0.2"; sha256="143xs3nkf6ynr83z5gggz318nvpnsbfmskl1ipavlzrqk785dlac"; depends=[beepr curl dplyr httr png]; }; - dae = derive2 { name="dae"; version="3.1-37"; sha256="102fgbdpn7yvm1zj180cv4sr1096sz35d4gndsv7w9kriqyi1c1l"; depends=[ggplot2 plyr]; }; + dae = derive2 { name="dae"; version="3.2-11"; sha256="0jrdfaw6aqv7k323yscsfpdkb3c4vi5ibncl6m96b9820pvycsz8"; depends=[ggplot2 plyr]; }; daewr = derive2 { name="daewr"; version="1.2-7"; sha256="138hmmrm3zcdb2rcilvrasndvsq38agp9bpikd3xbb7j4z1nrsl7"; depends=[FrF2 lattice stringi]; }; daff = derive2 { name="daff"; version="0.3.5"; sha256="00zcdf215m7p3xm9yv571v09znhdqacxg69hb5b5j749mp4wdsyj"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; dagR = derive2 { name="dagR"; version="1.2.0"; sha256="0fkh2cb0sln8sfklcxjr2qf68wjd4gbqkfay0kynvk5jan58f018"; depends=[]; }; + dagirlite = derive2 { name="dagirlite"; version="0.1.0"; sha256="12j5mfxcv32qgx1yklcq8yl2kx4lkxap4biywjrj0sjx6zj60f8l"; depends=[knitr Rdpack]; }; dagitty = derive2 { name="dagitty"; version="0.3-1"; sha256="1a78g2nr8i7mzzxyb6mfsqqgjyf3s4hwngvyd9vyygzcb79bai3x"; depends=[boot jsonlite MASS V8]; }; + daiR = derive2 { name="daiR"; version="0.9.0"; sha256="0kq633jpiagbpsj0190pzpxmz8df6niqc6lwqgrahxfpda798srk"; depends=[base64enc curl fs gargle glue googleCloudStorageR httr jsonlite magick pdftools purrr stringr]; }; dam = derive2 { name="dam"; version="0.0.1"; sha256="1b0fi3l8jxgpr9fwvi03giq7wm39msbh0c82ffgkh54a3bbf5blc"; depends=[]; }; - dampack = derive2 { name="dampack"; version="1.0.0"; sha256="0ig97cd81q4dif7s5sj1khsa21038gy14302a384z1zd3fjsms27"; depends=[dplyr ellipse ggplot2 ggrepel mgcv reshape2 scales stringr triangle truncnorm]; }; + dampack = derive2 { name="dampack"; version="1.0.1"; sha256="0mh3x0xgcipbd9341x3sfapysrd9m8aaakc1f53vwjj31c8vayqc"; depends=[dplyr ellipse ggplot2 ggrepel mgcv reshape2 scales stringr triangle truncnorm]; }; damr = derive2 { name="damr"; version="0.3.7"; sha256="12vr630m2az8xb8wndk8cyh7r8mwg3lvr7i3fcgqqxcq9rsgqm4r"; depends=[behavr data_table readr]; }; dams = derive2 { name="dams"; version="0.3.0"; sha256="1jlx1b4cir1vwq75jnmk0pc6j95syfpi0hlnkx82g7pwfxwrdrib"; depends=[crul fauxpas janitor readxl]; }; dang = derive2 { name="dang"; version="0.0.13"; sha256="1gnk6dlflvzspd510laqk90y3p24sk8lqp8cjbhhhfzhk2bjw9z3"; depends=[tidyCpp]; }; @@ -7436,7 +7733,7 @@ in with self; { dapr = derive2 { name="dapr"; version="0.0.3"; sha256="136chxijyxrl5sbiggxf56zga26zqds647z1z2igwn5mdff1wxyb"; depends=[]; }; daqapo = derive2 { name="daqapo"; version="0.3.1"; sha256="09fmnpp4nl6n1z834dxzs2v56ba9sfb4mrmc1nrrixxhfsxshmb7"; depends=[bupaR dplyr edeaR glue lubridate magrittr miniUI purrr readr rlang shiny stringdist stringr tidyr xesreadR]; }; darksky = derive2 { name="darksky"; version="1.3.0"; sha256="1740cw5qifgvqa0nafd6lmllxi32n1zm45zlify1yn3h1qdcszhb"; depends=[ggplot2 gridExtra gtable httr plyr]; }; - dartR = derive2 { name="dartR"; version="1.9.6"; sha256="1lisxip5f2aks008kq8myfsh1kbl74pndq0vbbb8vhgdz1d7c4cs"; depends=[adegenet ape crayon devtools dplyr foreach ggplot2 gridExtra HardyWeinberg hierfstat MASS plyr PopGenReport robustbase SNPRelate sp StAMPP stringr tidyr vegan]; }; + dartR = derive2 { name="dartR"; version="1.9.9.1"; sha256="1i2ha796k5xhyzz8q26pygc9hy2ay2b357h50ljfs2rf4np6l0sz"; depends=[adegenet ape crayon devtools dplyr foreach ggplot2 gridExtra HardyWeinberg hierfstat MASS plyr PopGenReport robustbase SNPRelate sp StAMPP stringr tidyr vegan]; }; darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dash = derive2 { name="dash"; version="0.5.0"; sha256="1hzyxplq0fclyr8ahh0mhrx1ibf49y43889p8fi8kmvg0x24i1iz"; depends=[assertthat base64enc brotli crayon dashCoreComponents dashHtmlComponents dashTable digest fiery htmltools jsonlite mime plotly R6 reqres routr]; }; dashCoreComponents = derive2 { name="dashCoreComponents"; version="1.10.0"; sha256="11jrlls6k6qlvi81741ga908aw22m05fhhr9jpzli982s611jrwl"; depends=[]; }; @@ -7444,7 +7741,7 @@ in with self; { dashPivottable = derive2 { name="dashPivottable"; version="0.0.2-1"; sha256="1fv5pnvimf7w1k1lsijh9y2zk4z1z00m6m640jxvqla5i1rqy8cq"; depends=[]; }; dashTable = derive2 { name="dashTable"; version="4.7.0"; sha256="0iy07dxa90vsp3rfk8ij78j9ajz1mpxywmclxzkfj7axjyydxh5w"; depends=[]; }; dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; - dashboardthemes = derive2 { name="dashboardthemes"; version="1.1.3"; sha256="0z2ar5q0ys5zbny2hfda0sxp29v76sc8xar1ah5hi5jlnas0iccz"; depends=[htmltools]; }; + dashboardthemes = derive2 { name="dashboardthemes"; version="1.1.5"; sha256="1wzaa9ppfhq9539i1a9g6z8rns3wgw22jdwqf0zc2wzazd0zp4ym"; depends=[htmltools]; }; dat = derive2 { name="dat"; version="0.5.0"; sha256="1d3q4bang6pm06rfzh6h947xy3wwqn3l6ri0h4hzklg5pzwpsajd"; depends=[aoos data_table Formula magrittr progress]; }; data_table = derive2 { name="data.table"; version="1.14.0"; sha256="0kgbvap5v2spnkz3dwfm4jh4qcpvbzdn9s8bzfnhzabz9qjdxw8k"; depends=[]; }; data_tree = derive2 { name="data.tree"; version="1.0.0"; sha256="0pizmx2312zsym4m42b97q2184bg3hibvbdrblcga05xln84qrs0"; depends=[R6 stringi]; }; @@ -7453,39 +7750,40 @@ in with self; { dataCompareR = derive2 { name="dataCompareR"; version="0.1.3"; sha256="178293hk21qjczi7hyffhlwn0lxrz2k9nxsy7jykjdbsqalyxwli"; depends=[dplyr knitr markdown stringi]; }; dataMaid = derive2 { name="dataMaid"; version="1.4.0"; sha256="133ipl06sc8iicvkbgjxfs0qia76r2p1qhi693vacgfdbd7cmak5"; depends=[ggplot2 gridExtra haven htmltools magrittr pander rmarkdown robustbase stringi whoami]; }; dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; }; - dataPreparation = derive2 { name="dataPreparation"; version="1.0.1"; sha256="040k83pknzgq9nn0bhw9p960pdnd8nkcc5hdr4h6193axzp54dh7"; depends=[data_table lubridate Matrix progress stringr]; }; - dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; + dataPreparation = derive2 { name="dataPreparation"; version="1.0.2"; sha256="01ns6qrqr3pm9qfzc2lky0nqcnyn7adg3pdjf461kqhb2pvzcimv"; depends=[data_table lubridate Matrix progress stringr]; }; dataReporter = derive2 { name="dataReporter"; version="1.0.0"; sha256="12rwjd46h35cydvfx5qhb4rssqpm94b628zr06gy9nhwydnajn5x"; depends=[ggplot2 gridExtra haven htmltools magrittr pander rmarkdown robustbase stringi whoami]; }; - dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.7"; sha256="13p95wcmjb3gy1kkm420299z9smc639mmh8nrxml8dbk6ga03n88"; depends=[curl httr jsonlite lubridate readr xml2]; }; + dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.10"; sha256="0lmd2j9inc29s2xk09gk7rbypgcqzpb2vmnnbmbg1liw96jsz5wl"; depends=[curl httr jsonlite lubridate readr xml2]; }; datacleanr = derive2 { name="datacleanr"; version="1.0.1"; sha256="1kvlnvh2s8csng9q1l5bgc6aw7ax88dfl0iwbi4r8gc76swcbywm"; depends=[clipr dplyr DT formatR fs glue htmltools htmlwidgets lubridate magrittr plotly purrr RColorBrewer rlang rstudioapi shiny shinyFiles shinyWidgets summarytools]; }; datadigest = derive2 { name="datadigest"; version="1.0.2"; sha256="1v4nwflrgjhwkrdlrjnqyq1spv1jkgxn1kmapml0zrvnvwf0r1a1"; depends=[haven Hmisc htmltools htmlwidgets jsonlite miniUI shiny tibble]; }; datadogr = derive2 { name="datadogr"; version="0.1.2"; sha256="10zbxb9gkymw78ras9y4wrifz7cxh3y630yzjcf9ds2p557vcjzp"; depends=[anytime dplyr glue httr lubridate purrr stringr tibble tidyr]; }; dataframeexplorer = derive2 { name="dataframeexplorer"; version="1.0.0"; sha256="1bl24z9hqhrs3k459b5hprwc7j639myvkx0qbfcyv3hmi7mbsd0q"; depends=[data_table dplyr magrittr openxlsx plyr stringr tibble tidyr]; }; dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; - datafsm = derive2 { name="datafsm"; version="0.2.3"; sha256="18q6s8sz8bm2xlfvhj0x5sagpn363s3k21s428wd0bqzqlppwbmb"; depends=[caret GA Rcpp]; }; - datagovindia = derive2 { name="datagovindia"; version="0.0.3"; sha256="1xc2bkpjaz9bjvxwjwxz398hkxkkykrjnxd3lqly722pf75cqvja"; depends=[curl dplyr httr magrittr plyr rlang stringr]; }; + datafsm = derive2 { name="datafsm"; version="0.2.4"; sha256="0klhkbwpaqxk2mnxha8b03mpgfxk107ff9d2nx6cky59il3c1825"; depends=[caret GA Rcpp]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; - datamods = derive2 { name="datamods"; version="1.1.4"; sha256="11zgask87ydqqcfb03ynmdnbp6q3dhdx0f3ma9m2pcd31a325pg1"; depends=[data_table DT htmltools readxl rio rlang shiny shinyWidgets tibble]; }; + datamods = derive2 { name="datamods"; version="1.1.5"; sha256="0nhii6csx4a2zk1ylv5b7f6wlz3rfp7hp2hww2z7p1s5v7pja6gz"; depends=[data_table DT htmltools readxl rio rlang shiny shinyWidgets tibble]; }; datanugget = derive2 { name="datanugget"; version="1.0.0"; sha256="1ki4kgz6y9a313f07jml39pdxhadgs287rkpnlwvcw6kgj5qxala"; depends=[doSNOW foreach]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; dataone = derive2 { name="dataone"; version="2.2.1"; sha256="1gnzyjiwppx5mjwf38nm146vvmy6vlpqy9ibd2rc5f744pdvifxb"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringi stringr uuid XML]; }; datapack = derive2 { name="datapack"; version="1.4.0"; sha256="1n69ycca7f7igl9n6spdhn2s431vrljmd0v80q3s5jnyb4mf4xyd"; depends=[digest hash redland uuid XML]; }; datapackage_r = derive2 { name="datapackage.r"; version="1.3.3"; sha256="1yvajidkgnvm07r5pm4zj55rlv013h0rzm2yzc1l55s7cswm5akv"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; datapasta = derive2 { name="datapasta"; version="3.1.0"; sha256="0sqv29iv2rv50rbw1601rn8p7gv7rsw00djhl7h1znr0igzi5b82"; depends=[clipr readr rstudioapi]; }; - dataprep = derive2 { name="dataprep"; version="0.1.1"; sha256="1pg1i5bfsvmx3y3k765nygwk8kka6kpv0nx1gka3zx5f7pq00p6b"; depends=[data_table doParallel dplyr foreach ggplot2 reshape2 scales zoo]; }; - dataquieR = derive2 { name="dataquieR"; version="1.0.5"; sha256="1g3kp61c50zvvcrhdfqrbqr7mg6l8lmdcnydbd9ap9g45niah8kb"; depends=[cowplot dplyr emmeans ggplot2 ggpubr lme4 lubridate MASS MultinomialCI parallelMap R_devices reshape rlang robustbase]; }; + dataprep = derive2 { name="dataprep"; version="0.1.4"; sha256="0knzwnhpj7ahrd12n56f65wmsmrapgnnqdl10b5cacf0idih12g5"; depends=[data_table doParallel dplyr foreach ggplot2 reshape2 scales zoo]; }; + dataquieR = derive2 { name="dataquieR"; version="1.0.9"; sha256="0wc7vjjjffvmg9ahbqnygfrsk97n7k4y1y0ichvpr2nc8pfi7772"; depends=[dplyr emmeans ggplot2 ggpubr lme4 lubridate MASS MultinomialCI parallelMap patchwork R_devices reshape rlang robustbase]; }; dataresqc = derive2 { name="dataresqc"; version="1.1.0"; sha256="1m7c93yk3dp1l5ysgscjvmv7z0xnmgaz4bkci4ljmmmn5a9v6r3c"; depends=[]; }; datarium = derive2 { name="datarium"; version="0.1.0"; sha256="1v98yxsxhfqlalz5qy3x5axb7fy067vf3y0qg7ngixphmy9qybym"; depends=[]; }; - datarobot = derive2 { name="datarobot"; version="2.17.1"; sha256="1kfd4xfpwglh05xj67gi14j1c4fwfcrf4kj0w077wk1vzyvz3n37"; depends=[httr jsonlite yaml]; }; - datasailr = derive2 { name="datasailr"; version="0.8.8"; sha256="136ccgv5cpa2cpxz256xialh6baxz23if86dfr5b2748aamrg1g7"; depends=[Rcpp]; }; + datarobot = derive2 { name="datarobot"; version="2.18.0"; sha256="1sjng65qjqbizyfdhc3iny04x56dpvbdb8mck2kl9lyayrjxp81g"; depends=[httr jsonlite yaml]; }; + datasailr = derive2 { name="datasailr"; version="0.8.9"; sha256="1jnbjhkrzprjhxcq7hqkfanz1qrnmrlsfbsjixliap6s647w1y5g"; depends=[Rcpp]; }; datasauRus = derive2 { name="datasauRus"; version="0.1.4"; sha256="1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; - datasets_load = derive2 { name="datasets.load"; version="1.4.0"; sha256="1gs7dvd6r7h3n55b33mdhf0kcvsrddbvl2f3f65k274ygza2j3r7"; depends=[DT miniUI shiny]; }; + datasets_load = derive2 { name="datasets.load"; version="1.6.0"; sha256="0ybxqk0azzaxvcdffqb8d62sap11sx2zp7j1ndva83pmamwpckfj"; depends=[DT miniUI shiny]; }; datasetsICR = derive2 { name="datasetsICR"; version="1.0"; sha256="1iw8am7y6r6j21rp6r6iw1ri4c2yrgza7aw3ams4xbx6mcz3746y"; depends=[]; }; - dataspice = derive2 { name="dataspice"; version="1.0.0"; sha256="1r97wsm32rqscjcaq9bbixhpddnx6j2ghi7l4vgx17gcfka29sj6"; depends=[dplyr EML fs ggplot2 jsonlite magrittr purrr readr rhandsontable shiny stringr tibble tidyr whisker]; }; + dataspice = derive2 { name="dataspice"; version="1.1.0"; sha256="1pnmb7kdx9wdvi2873rw1a7hc7spsvx4lfvfhfcqwgll46j0f1wm"; depends=[dplyr EML fs ggplot2 jsonlite magrittr purrr readr rhandsontable shiny stringr tibble tidyr whisker]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; datastructures = derive2 { name="datastructures"; version="0.2.9"; sha256="0prw24iy1af02g1nzw588dv085bdnl6pzvizpxspmwzj6vrfbaav"; depends=[BH purrr Rcpp]; }; + dataverse = derive2 { name="dataverse"; version="0.3.9"; sha256="10kdqav21j5f18jgf754d1wvlx1j61xs4kj31jwj48nkwr38719x"; depends=[checkmate httr jsonlite readr xml2]; }; + datawizard = derive2 { name="datawizard"; version="0.2.0.1"; sha256="15q491qix4a9b10wkb5bm9jnnr62smjw4qdrw4bd51i1kgvd6kl5"; depends=[insight]; }; + datazoom_amazonia = derive2 { name="datazoom.amazonia"; version="0.1.0"; sha256="06b294r5p1brj58imlf8hr0c004hfnb6l1sq7ssl2l2qr1f3r3cw"; depends=[data_table dplyr geobr googledrive Hmisc janitor labelled lubridate magrittr purrr RCurl readr readxl sf sidrar stringi stringr tibble tidyr XML]; }; date = derive2 { name="date"; version="1.2-39"; sha256="0mwp1619rxqyyyyxk224fh0x6g4rgyvr97q0kj076cxp71b97cdm"; depends=[]; }; daterangepicker = derive2 { name="daterangepicker"; version="0.1.0"; sha256="1605ch84ad3nmmad0yy3id0izv0nz536lxwib6rkdkjik5761gqk"; depends=[htmltools jsonify shiny]; }; datetime = derive2 { name="datetime"; version="0.1.4"; sha256="0nn1yxknsn3crmwbkws5kvfjhd65dw0fkfbg67gba0dyaqp1jg37"; depends=[]; }; @@ -7495,20 +7793,24 @@ in with self; { datplot = derive2 { name="datplot"; version="1.0.0"; sha256="1y9pls1g2flz8n3jbh4jcp1fn78qwfbgsrzyf3jms9f6w8fs0f1d"; depends=[]; }; datr = derive2 { name="datr"; version="0.1.0"; sha256="0sqwhn6zdaq8i45ry207mpbda1djjaxp9mcn13hi5wkry6z0bmlr"; depends=[devtools]; }; datrProfile = derive2 { name="datrProfile"; version="0.1.0"; sha256="1bhyk3xjgwf92i765z3bkdnzkxg8fshriz9r6m371q1c75xysfil"; depends=[dplyr odbc RSQLite]; }; + dauphin = derive2 { name="dauphin"; version="0.3.0"; sha256="04r48wld84by8lwqi9pwdypval814wfshjblmm30v5igwl1xcgzc"; depends=[]; }; dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; }; dawai = derive2 { name="dawai"; version="1.2.5"; sha256="0g52bm66jnvga4sf5n5m18k5jx56vqpn886jk0k6lydj78nkq88q"; depends=[boot ibdreg mvtnorm]; }; daySupply = derive2 { name="daySupply"; version="0.1.0"; sha256="1317g60cmqlw1wy7n7x5ifh544lzsysif6192s2k16jmgzj6cz2s"; depends=[dplyr lme4 magrittr rlang]; }; - daymetr = derive2 { name="daymetr"; version="1.4"; sha256="1xrkdjarkkikjbsxcjvhfba1dzrxh2nq7c04rvl0rkxh513sfqn1"; depends=[httr raster sp tibble tidyr]; }; + daymetr = derive2 { name="daymetr"; version="1.5"; sha256="0jwda9chhklzz9062857ivxmm09rnd1z8ydqsg8i8a90qh4db2n4"; depends=[httr raster sf tibble tidyr]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; + dbMC = derive2 { name="dbMC"; version="1.0.0"; sha256="0gcgn3m10sx0naim206jkw7szl0mr7vbnkn25avvv9f8iy3y9vcv"; depends=[softImpute]; }; dbWebForms = derive2 { name="dbWebForms"; version="0.1.0"; sha256="0diz5mh4fhwrwqa7jr70vzj2jks7h2n91v2hr1mvvlbc7rzd9yki"; depends=[data_table DBI html5 stringi]; }; dbarts = derive2 { name="dbarts"; version="0.9-19"; sha256="0k9hrighp6d0s6y97f1956zmgyj9i2k0akk2rpmxid4a4cnyszkc"; depends=[]; }; - dbd = derive2 { name="dbd"; version="0.0-8"; sha256="087cn3fi2kzxfl9b29m95qyjndzyz2ll8j0a80sjpbfzcd0hmma8"; depends=[]; }; + dbcsp = derive2 { name="dbcsp"; version="0.0.1.0"; sha256="08y111ivy5f8jgmlsmf52vxxc64j2z4lijvdx1bx6a90vcvlqc51"; depends=[caret geigen ggplot2 MASS Matrix parallelDist plyr TSdist]; }; + dbd = derive2 { name="dbd"; version="0.0-22"; sha256="13qdm0y5dvc107xnv6663gbvmkw77150r073lp1jppf3gs8s587b"; depends=[]; }; dbflobr = derive2 { name="dbflobr"; version="0.1.0"; sha256="0sh14lf6qnj3z4lwkw27vv1s57jf5lfmw9lmz0hvd6nbfgmcr9rg"; depends=[chk clisymbols crayon DBI flobr glue rlang RSQLite]; }; + dbglm = derive2 { name="dbglm"; version="1.0.0"; sha256="1ljfi31n8d1mh1lr4q00klp74fz0c0jy9wdy2svhlzaszbrg76ky"; depends=[DBI dbplyr dplyr knitr purrr rlang stringr tibble tidypredict tidyr tidyverse vctrs]; }; dbhydroR = derive2 { name="dbhydroR"; version="0.2-8"; sha256="1gd3n6i47qbxp6d3y5sjvgmxc5p3afy2lhkg9020ws1xm0bk9q7d"; depends=[httr reshape2 XML]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; - dbmss = derive2 { name="dbmss"; version="2.7-5"; sha256="0z9v6sxckk95kcybj2lly6sl2qjb8sz5y2iykckqhji55haxpvlz"; depends=[cubature ggplot2 Rcpp RcppParallel reshape2 spatstat_core spatstat_geom spatstat_utils tibble]; }; + dbmss = derive2 { name="dbmss"; version="2.7-7"; sha256="0pzk9xb3zxnk42mashigd1qyg4yvd06wd92lqcbf37cyv2jgwynv"; depends=[cubature ggplot2 Rcpp RcppParallel reshape2 spatstat_core spatstat_geom spatstat_utils tibble]; }; dbnR = derive2 { name="dbnR"; version="0.5.3"; sha256="0ypdzd1idkzwm9yawx576mcf5b2rq7m0q71zmmkjygks8g7a0jz6"; depends=[bnlearn data_table magrittr R6 Rcpp]; }; dbnlearn = derive2 { name="dbnlearn"; version="0.1.0"; sha256="0kmyiad7v96mnfi24d2pn3dqmk3g82sx348m1vhhqwijfnj53brb"; depends=[bnlearn bnviewer ggplot2]; }; dbparser = derive2 { name="dbparser"; version="1.2.0"; sha256="06yk6i80xlvrjgi8lpzz82rhhmkbj980vpmpil57acjkfvaznwj6"; depends=[DBI dplyr odbc progress purrr readr RMariaDB RSQLite tibble XML]; }; @@ -7525,21 +7827,23 @@ in with self; { dclust = derive2 { name="dclust"; version="0.1.0"; sha256="1icfx52v3g7kkkc11pw0xlrc8dlx5q3n2zbrd3fccmw17jzxqbg7"; depends=[openssl phylogram]; }; dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; }; dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; }; - dcmodify = derive2 { name="dcmodify"; version="0.1.5"; sha256="1v8zv979iqlzfb75h542fkhy149kx1jqsv8rp13han9gd2kalp60"; depends=[settings validate yaml]; }; + dcmodify = derive2 { name="dcmodify"; version="0.1.9"; sha256="0p4xw74rls7i3fymsjcrazkrp22cfrfffz63l7wyb842z902smls"; depends=[settings validate yaml]; }; + dcortools = derive2 { name="dcortools"; version="0.1.2"; sha256="0p4qbah5jnb6jraka8bg6cks3namrz66bya2iz98q2adarqd517h"; depends=[ggplot2 Hmisc pheatmap Rcpp RcppArmadillo RcppEigen Rdpack Rfast]; }; dcov = derive2 { name="dcov"; version="0.1.1"; sha256="0c3a5dzpizsxlsh723pcd0d7n0mgfc9y35vrfhmskp3c1x639mh3"; depends=[Rcpp RcppArmadillo]; }; dcurver = derive2 { name="dcurver"; version="0.9.2"; sha256="1v4h480lff1cyjjwb80dksiffh0y4b3s07lq2l2r21rn1l4mav6c"; depends=[Rcpp RcppArmadillo]; }; + dcurves = derive2 { name="dcurves"; version="0.2.0"; sha256="0vm1cg6sr152fg5bgy2inf4x42vkbvw9ahy5b1dda8jgc6s7zr9v"; depends=[broom dplyr ggplot2 glue purrr rlang scales survival tibble]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddalpha = derive2 { name="ddalpha"; version="1.3.11"; sha256="1sdnb47r534nh138zk3a6b2mgi74nvshc7p5m304vjs9jlx4l2y3"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; dde = derive2 { name="dde"; version="1.0.1"; sha256="0qgnxb27a2wnrbfk5v22i985mqhjp4hp05vl1ccsapbxkpf0gqcv"; depends=[ring]; }; ddi = derive2 { name="ddi"; version="0.1.0"; sha256="0pnkylz7l6brx6i73wys637w811psxhnr39lcmkag41s6jcgabd5"; depends=[]; }; ddiv = derive2 { name="ddiv"; version="0.1.1"; sha256="0xsn74z78znrm3rnnvdphp89sb0lik564ha3wv6n3ldrfh1van8y"; depends=[MASS qpdf segmented]; }; - ddp = derive2 { name="ddp"; version="0.0.2"; sha256="0fh1ml5gsk26p2i9cnv0hn5kbix0rrl3xb60y6vnpxzsr2n6xw25"; depends=[]; }; + ddp = derive2 { name="ddp"; version="0.0.3"; sha256="03gszqzh73zq04hqa2zgxn4fkiyr1fbhx3byxsdfzmmji46f8qip"; depends=[]; }; ddpca = derive2 { name="ddpca"; version="1.1"; sha256="1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1"; depends=[MASS Matrix quantreg RSpectra]; }; ddpcr = derive2 { name="ddpcr"; version="1.15"; sha256="04q2k6kag3qx9g6iarb84ski7s895xdd20zlaw7wmidfv038kmws"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs tibble]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.1"; sha256="0yczn63fhpirvz1g1kq9q0m04sisflxxgxy70c87jyvrw12nfwss"; depends=[deSolve gdata gptk]; }; - deSolve = derive2 { name="deSolve"; version="1.28"; sha256="0jasvdzig0pzhzspmy20089az19r91xjfb9q6h8gj7c4mr6fymac"; depends=[]; }; + deSolve = derive2 { name="deSolve"; version="1.29"; sha256="02hrd31ky9id7q2bwkj436j4fj4xbs3j9sfmyi1nl7hml5dy2vr6"; depends=[]; }; deTS = derive2 { name="deTS"; version="1.0"; sha256="08yq7vfcd8fv8qw2w0f1rnj3rzys9kslmkqspmiz6prmzqvj1zf1"; depends=[pheatmap RColorBrewer]; }; deTestSet = derive2 { name="deTestSet"; version="1.1.7.2"; sha256="0ra7686zkyaj61fd6s2mm6blzpqhplw9icwzfczk9aagg8nc4s72"; depends=[deSolve]; }; deaR = derive2 { name="deaR"; version="1.2.3"; sha256="1lhs649kr7zm4m6qqlkk2qz0wn98vx674lri7b9p2r846zzwq9y9"; depends=[dplyr ggplot2 gridExtra igraph lpSolve plotly tidyr writexl]; }; @@ -7553,10 +7857,11 @@ in with self; { decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; decisionSupport = derive2 { name="decisionSupport"; version="1.106"; sha256="1qp18a9gawb6qpkscw54yq6dn2pzv95wqpz4c3wism0npjdj2zv7"; depends=[assertthat chillR dplyr fANCOVA ggplot2 ggstance magrittr msm mvtnorm nleqslv patchwork rriskDistributions stringr tidyr tidyselect]; }; deckgl = derive2 { name="deckgl"; version="0.2.7"; sha256="0ifv6j0kbwayl60bf1rwd1h7424npqsqsvb44ngg7v0ik4bgbyfx"; depends=[base64enc htmltools htmlwidgets jsonlite magrittr readr tibble yaml]; }; + declared = derive2 { name="declared"; version="0.7"; sha256="17jc2d2gw6ss8w5d6a5w1mh3h3yyg0mrpys8kqkb5hpfr19r16c7"; depends=[admisc]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; decoder = derive2 { name="decoder"; version="1.2.2"; sha256="1jxgd32bn36ldal26wivhdxgjy247l7r4ickacr1p8rrwxvhpk18"; depends=[]; }; decomposedPSF = derive2 { name="decomposedPSF"; version="0.1.3"; sha256="0p9n0qi21facdp9c4fzs78ap4w1wvpvkv51kgx1gkr949kw8cv4n"; depends=[forecast PSF Rlibeemd tseries]; }; - decompr = derive2 { name="decompr"; version="4.5.0"; sha256="1kbk4z1pr1j4i1sgfkjxzjy2j2fcmrf3vacnrpv1fba2ib10619k"; depends=[]; }; + decompr = derive2 { name="decompr"; version="6.0.0"; sha256="10j2lyly7parlx54bapf1dqh2mxjx9sf4ki4rjh90rlmw9qd0kpn"; depends=[matrixStats]; }; decon = derive2 { name="decon"; version="1.2-4"; sha256="1v4l0xq29rm8mks354g40g9jxn0didzlxg3g7z08m0gvj29zdj7s"; depends=[]; }; deconstructSigs = derive2 { name="deconstructSigs"; version="1.8.0"; sha256="014x0nb23jb98666kaav2phkvmkr38pi38jv0dqd4jv7zp0gdf1a"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb reshape2]; }; deconvolveR = derive2 { name="deconvolveR"; version="1.2-1"; sha256="191bgncgwjhb13i27bf8072a0z3mkpjbbp06ys3nri0ggsv5r108"; depends=[]; }; @@ -7564,22 +7869,25 @@ in with self; { decorators = derive2 { name="decorators"; version="0.1.0"; sha256="0whcwi68h374pm85gzwaw7kcjhgka1il12g90vrf87lafhbl2x4i"; depends=[purrr]; }; deducorrect = derive2 { name="deducorrect"; version="1.3.7"; sha256="10lvhdnnc6xiy20hy6s5rpqcvilj8x0y6sn92rfjkdbfsl00sslp"; depends=[editrules]; }; deductive = derive2 { name="deductive"; version="1.0.0"; sha256="11cn6wncd438g5ar5pjw6rw50060mksjf0xjcds92s97dz5m28a4"; depends=[lintools stringdist validate]; }; + dedupewider = derive2 { name="dedupewider"; version="0.0.2"; sha256="1vqp3pab318idq2dnqp68fwv7bk36aablvjsnb2y97azxan6kfbl"; depends=[data_table]; }; deep = derive2 { name="deep"; version="0.1.0"; sha256="1764cnsax8jwp2pb6rnmlb0f5m99jss84yi9rp017hdm20izvzrq"; depends=[]; }; deepMOU = derive2 { name="deepMOU"; version="0.1.1"; sha256="1r05wg01nighmhs2r8z91w091fz2r1ryb1j0mi96knqqdjgcbh4i"; depends=[dplyr entropy extraDistr ggplot2 MASS Rfast skmeans]; }; - deepNN = derive2 { name="deepNN"; version="1.0"; sha256="0jpf25i0f3a0dfqykx8dl8qq7f37l1n28pzp715bxc0izsrrx9bk"; depends=[Matrix]; }; + deepNN = derive2 { name="deepNN"; version="1.1"; sha256="0iqvr8cl7ks5qvwsp1sx10r4jpbchf4mlsq0s3icr2cs3x3ryxvi"; depends=[Matrix]; }; deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; }; - deepdive = derive2 { name="deepdive"; version="1.0.2"; sha256="1gp7f4mnyayks7m8vz1nxrclnpmqz12kd7z8lhz8wcf76z01cbpv"; depends=[data_table fastDummies plyr rpart stringr treeClust]; }; + deepdep = derive2 { name="deepdep"; version="0.2.5.3"; sha256="15fz8xym5xskg9nrxapzbh32dvxw1pbwmr2r831hcsdx3gh71yd7"; depends=[cranlogs ggforce ggplot2 ggraph graphlayouts httr igraph jsonlite scales]; }; + deepdive = derive2 { name="deepdive"; version="1.0.4"; sha256="0q4jjq11bd52bx0vqjxsh0fz1b72pfy4gpj5p19z7p4czf4a46c6"; depends=[data_table fastDummies plyr rpart stringr treeClust]; }; deepgmm = derive2 { name="deepgmm"; version="0.1.62"; sha256="1cllbq87xxzgba3a1prkjg7hdfkxjnmi8fgizqrlsvbxdhpg61yh"; depends=[corpcor mclust mvtnorm]; }; - deepgp = derive2 { name="deepgp"; version="0.2.0"; sha256="0svbgng854qw8ar18ypd94jx38gjk9j33dqq0wxdjg7flqm8bi7w"; depends=[doParallel foreach]; }; + deepgp = derive2 { name="deepgp"; version="0.2.1"; sha256="0ixb7giis7a5v6cnzl5i7xgs20sq5p7anna7izvj03hb4j4dd8nx"; depends=[doParallel foreach]; }; deeplr = derive2 { name="deeplr"; version="2.0.0"; sha256="189kfcsd3cr0397krbfqh56x7h0v6i27s5jbfwr5zrf3jazllall"; depends=[httr purrr tibble tokenizers utf8]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; - deepredeff = derive2 { name="deepredeff"; version="0.1.0"; sha256="0bfjkq46nds4xhbqvjd1ng36s3x41hv90w6lvdh04m7kbx5yx9sz"; depends=[Biostrings dplyr ggplot2 ggthemes keras magrittr purrr reticulate rlang seqinr tensorflow]; }; + deepredeff = derive2 { name="deepredeff"; version="0.1.1"; sha256="027dsmc3wmm61qc0vybn02c5dbnz5nwf80m9sywci4nhirz978ik"; depends=[Biostrings dplyr ggplot2 ggthemes keras magrittr purrr reticulate rlang seqinr tensorflow]; }; + deeptime = derive2 { name="deeptime"; version="0.2.0"; sha256="1nc7n2x7glrmbgsgnmwqggwp45ir8y31g11s2iq5v68ad78pl0x3"; depends=[ggfittext ggforce ggnewscale ggplot2 gridExtra gtable lattice rlang scales]; }; default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; }; define = derive2 { name="define"; version="0.2.9"; sha256="0sq7ryiz1py0yw7g2bncd834zsdiy1y7rck8k4grrx2ips5gv2jy"; depends=[encode Hmisc latexpdf SASxport spec]; }; deflateBR = derive2 { name="deflateBR"; version="1.1.2"; sha256="17zsy10k12gmffbk7nagi60xj347q0bf7wr885fiylqz2xiy9fl9"; depends=[dplyr httr lubridate]; }; deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degreenet = derive2 { name="degreenet"; version="1.3-3"; sha256="07mkj2sdp09624mmb1x3djjypnrzn43qn2j4m93blli51j6zchm3"; depends=[igraph network]; }; - deisotoper = derive2 { name="deisotoper"; version="0.0.7"; sha256="0lpmx3qy44xjlil4nsbvcbczxq22vr8xn6v9a5bdx7cd31qwm2l3"; depends=[rJava]; }; + degross = derive2 { name="degross"; version="0.9.0"; sha256="17n389a0k4jswgs908bcdhi410wpd1ljxh5izv35cldfq7dhjb3k"; depends=[cubicBsplines]; }; dejaVu = derive2 { name="dejaVu"; version="0.3.0"; sha256="0l30m707zrp05d7hywlx443n02mflxqsampmcblj3fvcbyywc1fd"; depends=[MASS]; }; delayed = derive2 { name="delayed"; version="0.3.0"; sha256="04f4k683jzb763sb9knb81lw8df56y1378g4i3c1x8m83bvj1mhs"; depends=[assertthat BBmisc data_table future igraph progress R6 rlang rstackdeque uuid visNetwork]; }; deldir = derive2 { name="deldir"; version="0.2-10"; sha256="08ij6zb6id71zk6gzs9z779y49y41c2gpi7p7mljnlw7py92g8k5"; depends=[]; }; @@ -7595,8 +7903,8 @@ in with self; { demography = derive2 { name="demography"; version="1.22"; sha256="1m15capbfknr4rqxmfgj1vb7rmgambk6r9ic37149525sg7wn3j6"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; demu = derive2 { name="demu"; version="0.3.0"; sha256="1mp5iz8mg0d6cyqi3f6fdhk6x5xxvng5bi13b7jnlp60wpjrq0il"; depends=[ClusterR fields Matrix Rcpp RcppArmadillo spam]; }; dendRoAnalyst = derive2 { name="dendRoAnalyst"; version="0.1.1"; sha256="0pdhd89kn9ndc9xdqwpjb1h49zwgya8whjfhpjvlc7cwb3112xj1"; depends=[boot pspline zoo]; }; - dendextend = derive2 { name="dendextend"; version="1.14.0"; sha256="0n3qg76apgbqbvxv2yp5qwpy6nx03xmmc9mdfyq4dqblqhdld29p"; depends=[ggplot2 magrittr viridis]; }; - dendroTools = derive2 { name="dendroTools"; version="1.1.3"; sha256="1crkzp75lpf0lagr2vl8sgzck80nrcm40mrmq0h4a2k7yha2mqrw"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales viridis]; }; + dendextend = derive2 { name="dendextend"; version="1.15.1"; sha256="0zf4w4rc2jj30i3x0m0gnkwidfmn3cvz1wirp20amq4v3n9420md"; depends=[ggplot2 magrittr viridis]; }; + dendroTools = derive2 { name="dendroTools"; version="1.1.4"; sha256="1491vvdha6vm8992ah67vp1pgsz4khjzwnnddjp8pblacnswja59"; depends=[boot brnn Cubist dplyr ggplot2 gridExtra knitr lubridate magrittr MLmetrics oce plotly psych randomForest reshape2 scales viridis]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.4"; sha256="0rs7y471wrhkgibxdmfh5xhp3pa004rrlm2w08b6qli5gq4im5d2"; depends=[]; }; @@ -7604,7 +7912,7 @@ in with self; { denoiseR = derive2 { name="denoiseR"; version="1.0.2"; sha256="1q5kxiwfkrf2k0gpidzhl4hyzyjcm33rwlw4dan9nkx1181naw9l"; depends=[FactoMineR irlba Matrix]; }; denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; }; - densEstBayes = derive2 { name="densEstBayes"; version="1.0-1"; sha256="16dk5fibfcflkjafhard11i1lhnxsh61m65gdbsa2jzan8kb6r21"; depends=[BH MASS nlme Rcpp RcppArmadillo RcppEigen RcppParallel rstan StanHeaders]; }; + densEstBayes = derive2 { name="densEstBayes"; version="1.0-2"; sha256="16fb7vkic9q5p8s4f0f215zmb36fcizqr4r2vm9dxxj9rasrg2f3"; depends=[BH MASS nlme Rcpp RcppArmadillo RcppEigen RcppParallel rstan StanHeaders]; }; denseFLMM = derive2 { name="denseFLMM"; version="0.1.2"; sha256="1lfhd73zvvz6glq41lb2a9x63fjwjfp53zmy9g78fg6gz5lbnbpm"; depends=[MASS Matrix mgcv mvtnorm]; }; densitr = derive2 { name="densitr"; version="0.1.0"; sha256="1vqdvfka6wdfxqfy2qcacss0h6wxykmwyijr5blpvlpafjdmngaq"; depends=[changepoint]; }; densityClust = derive2 { name="densityClust"; version="0.3"; sha256="1zry0vafajzmr37aylglxfvwplhdygbkb9cvzvh8cy0xgnjrnx13"; depends=[FNN ggplot2 ggrepel gridExtra RColorBrewer Rcpp Rtsne]; }; @@ -7615,14 +7923,14 @@ in with self; { depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; depigner = derive2 { name="depigner"; version="0.8.4"; sha256="0n4skz3ngz41g0lydcw1jpqlzw0pdfks2rj63pa78qhcr84s6n57"; depends=[desc dplyr fs ggplot2 Hmisc magrittr progress purrr rlang rms rprojroot stringr telegram_bot tibble tidyr usethis]; }; depmix = derive2 { name="depmix"; version="0.9.16"; sha256="1vi9fi131ni34z9p3x6pdp6y9v0y0nx71zg1q8898frhqwbwhd9c"; depends=[MASS]; }; - depmixS4 = derive2 { name="depmixS4"; version="1.4-2"; sha256="07d4fxwnbl3jqczrylbvdch9q87az37jrjsmvilhl9h98z31wzaq"; depends=[MASS nlme nnet Rsolnp]; }; + depmixS4 = derive2 { name="depmixS4"; version="1.5-0"; sha256="1pacvhw5m4fsk3ysbal50fdqbvlaz8ywyqp6bn1wh42wipqbb2i8"; depends=[MASS nlme nnet Rsolnp]; }; depth = derive2 { name="depth"; version="2.1-1.1"; sha256="0szy0027nh4ps1z919i740i50app5q7cfyg1fj7pdyl45nbl8k6m"; depends=[abind circular rgl]; }; depth_plot = derive2 { name="depth.plot"; version="0.1"; sha256="0zjg9iyqmcnkvwc9w2j7lmk3k9nsg6n8m6vq5x44d1bp4g2gr6jv"; depends=[mvtnorm]; }; - depthTools = derive2 { name="depthTools"; version="0.5"; sha256="0980w80vc25dwrkrsfyx84g8dxz94hwzx0j7x4y2jx4k3nflbmqv"; depends=[]; }; + depthTools = derive2 { name="depthTools"; version="0.7"; sha256="00pn4ccsg1hjv83xqk4g0g24cz2a87shlbg8kd2dri4dcagzifg0"; depends=[]; }; dequer = derive2 { name="dequer"; version="2.0-1"; sha256="04kzlff8xa733qkkx0gacgig7d4l7yvgqmzva0mj8di12byh214p"; depends=[]; }; derivmkts = derive2 { name="derivmkts"; version="0.2.4"; sha256="1ncqhi6f69jv75dad1l9wsrfxi5m2wizywikkbg7i9qmh42xkh8w"; depends=[mnormt]; }; desc = derive2 { name="desc"; version="1.3.0"; sha256="1sw4vya3l971gpccq4gnjywgbl73bgx8la18l0wy617qv94f905y"; depends=[crayon R6 rprojroot]; }; - descomponer = derive2 { name="descomponer"; version="1.5"; sha256="1dxnvignd3hwagkghvdiqfrkxlhyvxndprcyh8n9pmq8zgask5qk"; depends=[]; }; + descomponer = derive2 { name="descomponer"; version="1.6"; sha256="1yznb6j850gap1bacvx5dkh4030x38041ll61z6an6h7j71yyc5p"; depends=[]; }; descr = derive2 { name="descr"; version="1.1.5"; sha256="00l3h71y4yfys60sqhifxyxvnjbkxxfxdb4zqjyy0v91pf3z2zv9"; depends=[xtable]; }; describedata = derive2 { name="describedata"; version="0.1.0"; sha256="10ryy886jr2gwi6h90girl82ivwrmhz1vcwi4f6khmmpwsy95hav"; depends=[broom dplyr forcats ggplot2 haven lmtest purrr rlang stringr tibble tidyr]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; @@ -7646,19 +7954,19 @@ in with self; { detectseparation = derive2 { name="detectseparation"; version="0.2"; sha256="17fpspfsn1rbns8783a0iv5zix95lxza0vfcc7g9v36yarxly609"; depends=[lpSolveAPI pkgload ROI ROI_plugin_lpsolve]; }; detpack = derive2 { name="detpack"; version="1.1.3"; sha256="1mk2k9akagz7knd4n5p8nxkmnm2mdv9izk4i5yl2v9nv5v39mc4h"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - detrendr = derive2 { name="detrendr"; version="0.6.13"; sha256="1viri9f6hiivddv3rd7whq8l0my932f9074qj117wqmwvxb8zc57"; depends=[arrayhelpers autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr plyr purrr Rcpp RcppParallel rlang stringr withr]; }; + detrendr = derive2 { name="detrendr"; version="0.6.14"; sha256="18yb14blw3md83lnlzalq3aqih56nndwwljds1pjqpm0ssf1d3p0"; depends=[arrayhelpers autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr plyr purrr Rcpp RcppParallel rlang stringr withr]; }; detzrcr = derive2 { name="detzrcr"; version="0.3.1"; sha256="0afi1ir8il5xmzkpmbc2m5mvmgzlqw8qdn04gbnwl74a03yaxxmj"; depends=[DT ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="4.0-2"; sha256="1wpziix6g1lr7qq728dfxvd0dyynnliilk029pl861mzx2dgdr6l"; depends=[]; }; devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; devRate = derive2 { name="devRate"; version="0.2.1"; sha256="1wq32igzc0xk0vmddrn1zk8m7zxy0gpvpswlgjjmxflslp3yszjf"; depends=[]; }; devoid = derive2 { name="devoid"; version="0.1.1"; sha256="14cf75wih7401vmrfmswc9cihgmbyn90wg2vjkzv628mm5fgg01h"; depends=[]; }; - devtools = derive2 { name="devtools"; version="2.4.0"; sha256="094kl4d07kvmn1dcvq73mn4r30c4vpshrqj4998azh7garjlz3kj"; depends=[callr cli desc ellipsis fs httr jsonlite lifecycle memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; - dexter = derive2 { name="dexter"; version="1.1.2"; sha256="08bh3av783f4psfyslxn8hmyvzdkpp3cwkfakhq91bipm4n51m7s"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; + devtoolbox = derive2 { name="devtoolbox"; version="0.1.0"; sha256="0ry0liw7a27nndhb5p7migx2ji2g3n1qpip1yr7mlikb7vxap2d6"; depends=[dplyr DT flexdashboard ggiraph ggplot2 gh htmltools httr jsonlite lubridate magrittr markdown purrr reshape2 rmarkdown stringr tidyr tidyselect]; }; + devtools = derive2 { name="devtools"; version="2.4.2"; sha256="01cg2ykg0av6z7bgl41njcxcii8vjj8ipch26xazp4yjai8abw3i"; depends=[callr cli desc ellipsis fs httr lifecycle memoise pkgbuild pkgload rcmdcheck remotes rlang roxygen2 rstudioapi rversions sessioninfo testthat usethis withr]; }; + dexter = derive2 { name="dexter"; version="1.1.3"; sha256="19cvgg14zv3swr8jrvpdsbsrx3vxly4zcg5wmb07r1rvqlh2lgcg"; depends=[DBI dplyr MASS Rcpp RcppArmadillo rlang RSQLite tidyr]; }; dexterMST = derive2 { name="dexterMST"; version="0.9.2"; sha256="118y8a33l85klj6w5vj5mkr64xvmbf16n6ff3nsk7nx7v1f26x6d"; depends=[crayon DBI dexter dplyr igraph Rcpp RcppArmadillo rlang RSQLite tidyr]; }; - dextergui = derive2 { name="dextergui"; version="0.2.2"; sha256="1g6qxjmxkrna10lahsdfilpjw587kk6zh8vs1saw9l27i3izpbi9"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; + dextergui = derive2 { name="dextergui"; version="0.2.3"; sha256="1vq2flgry3dl90laj6dq3wsd6b90h3s3kbaqj99f67majagqqdcl"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets jsonlite networkD3 RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; - dfConn = derive2 { name="dfConn"; version="0.2.1"; sha256="03yl00mqj6r7p2xmrwam2chgqlq4qpfcm85n4b3b41vrm27xg11g"; depends=[data_table doParallel fields foreach ggplot2 gplots gtools nlme Rcpp RcppArmadillo stringr]; }; - dfadjust = derive2 { name="dfadjust"; version="1.0.2"; sha256="0l0i4w1yccfwr2kflx2c0i7zrkwlxdfmspjrd8xrbrx0xrz68j9s"; depends=[]; }; + dfadjust = derive2 { name="dfadjust"; version="1.0.3"; sha256="0s9wsws1nxf3fij0jgi6aqqvbx0clk1rdjjyw9in3d1a6ywzcx89"; depends=[]; }; dfcomb = derive2 { name="dfcomb"; version="3.0-0"; sha256="1vsqlhmajv33nbnh8igisyv3rzzh2fdwbk5y0zlnrwvr79r19k5w"; depends=[BH Rcpp RcppProgress]; }; dfcrm = derive2 { name="dfcrm"; version="0.2-2.1"; sha256="01rn3zvi9xljmx48lkclckhnixian1vwq1frr8n784dsclp86spg"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; @@ -7673,7 +7981,7 @@ in with self; { dfpk = derive2 { name="dfpk"; version="3.5.1"; sha256="010rlxj66ar3y61fnm7ys3p6aimlr8ylqq4q4flzr9m88klz8701"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; dfrr = derive2 { name="dfrr"; version="0.1.4"; sha256="02hldg31pgicpqffvh61j83d0vcg84mjicirzqhn988wi8gps42r"; depends=[fda ggplot2 MASS plotly tmvtnorm]; }; dfvad = derive2 { name="dfvad"; version="0.3.0"; sha256="1n6hwpgnpd8vlv187ajl6js8z3yvl60h87q3kzgi9hvn9v73ip5z"; depends=[]; }; - dga = derive2 { name="dga"; version="2.0.0"; sha256="0axvzgliqd5i200lchsm2afy7nhwzmha28asgps3wlfbvx5hyvy7"; depends=[chron Rcpp RcppArmadillo]; }; + dga = derive2 { name="dga"; version="2.0.1"; sha256="1q860hzxrbkpmnphdysx4wk1b46wjll8sw7xjsy1lxcaz9hwcnjk"; depends=[chron Rcpp RcppArmadillo]; }; dglars = derive2 { name="dglars"; version="2.1.6"; sha256="13bnvinqgpmkisjri0sjsyzsh9nqplpry3n3galkv8dqhgpncq4w"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.4"; sha256="09b74s7xdqv6y2qrlk67c7nfi7sw6azmpyvnan2rpbvxqlky9xgd"; depends=[statmod]; }; dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; @@ -7684,22 +7992,25 @@ in with self; { dhh = derive2 { name="dhh"; version="0.0.1"; sha256="00kg2x1was85aq2vr15bak8y5p4mymbs8pbriijlbw64401djmb0"; depends=[]; }; di = derive2 { name="di"; version="1.1.4"; sha256="1w2gjhyi410z98d8wnhbd69jxm69nz4pmnr4fb09i70a90f53s25"; depends=[scales]; }; diagis = derive2 { name="diagis"; version="0.1.5"; sha256="1vjj27nn1fjx7wpqpn5x7pir4kd7b4pz9y6mz8a4jby9imc5ypnk"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; }; - diagmeta = derive2 { name="diagmeta"; version="0.4-0"; sha256="1z7h1sxcqn53121m33d2w196lyzkrgj1afc8i8h9iab99fgqvpk7"; depends=[lme4 meta]; }; - diagonals = derive2 { name="diagonals"; version="5.2.0"; sha256="0la1w9frnz5znljzcs9np4cn32rhb6zw6bc1cbnfq8n8nnrviy10"; depends=[]; }; + diagmeta = derive2 { name="diagmeta"; version="0.4-1"; sha256="1xb49m5q7r1amv0kpr62yab3fb3xsaxmx3p0fgcmwiyvv8vzkdnw"; depends=[lme4 meta]; }; + diagonals = derive2 { name="diagonals"; version="6.0.0"; sha256="1gpm7i22s3v4v7kfgph4k99n255cgzsvc2k11kdflm1zdlp5vg2v"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.5"; sha256="1r3lyl0h7mk9cfg8smr3jydfkjdawaphnxibkxfjqa7029vkxh79"; depends=[shape]; }; - dialr = derive2 { name="dialr"; version="0.3.2"; sha256="0b0dbk25j5ixwn8gxf651bj2akjcy1rjr3c191h8wddn9y99ip06"; depends=[dialrjars rJava]; }; - dialrjars = derive2 { name="dialrjars"; version="8.12.22"; sha256="0q00c3b8vksaq9028hm8b177ym0hzq5vcq8aqgmf583mj6fi5nv5"; depends=[rJava]; }; - dials = derive2 { name="dials"; version="0.0.9"; sha256="0g9wj2py4wz703rh4p7hk8qxqnkm7zyrypv4qz4vaqziazjsmxks"; depends=[DiceDesign dplyr glue purrr rlang scales tibble vctrs withr]; }; + dialectR = derive2 { name="dialectR"; version="1.0"; sha256="11fd2fdxczlcxkk3pwhiw0vb51bndh9qcfp7pqcfj1z7aga52xk0"; depends=[deldir dplyr dtw ggplot2 ggvoronoi Rcpp RcppProgress reticulate sf tibble]; }; + dialr = derive2 { name="dialr"; version="0.4.0"; sha256="1di5b3w1iif8702j5gnkwp55psbgzwb54ccxah3xscy75sg3zmpm"; depends=[dialrjars rJava]; }; + dialrjars = derive2 { name="dialrjars"; version="8.12.29"; sha256="08wvnmy4c6bfj8hpf8rhiwc0xidmz0y84s36dwjl4bfdqyw3q4r0"; depends=[rJava]; }; + dials = derive2 { name="dials"; version="0.0.10"; sha256="1vhqcfwgic01pkw0i3000fvqq9yxfzsv26c0psfjhxkkdcz8h2px"; depends=[DiceDesign dplyr glue purrr rlang scales tibble vctrs withr]; }; diaplt = derive2 { name="diaplt"; version="1.3.0"; sha256="1kkqhkv3s8rrpqd05jidjdnqmlnb3s9f8rr34rfqj7k4nh0qzzcz"; depends=[]; }; + diathor = derive2 { name="diathor"; version="0.0.6"; sha256="1v3mqrb8jikwa0j94zg5ll5dxdyrx0f8vh6q5j1232152g5nqjpj"; depends=[data_table ggplot2 purrr stringdist stringr tibble tidyr vegan]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; - diceR = derive2 { name="diceR"; version="1.0.3"; sha256="1p1fs3bgg84qbzlwi0lkgk0y0jixf04ypx7jdz92ljbjcryifvvd"; depends=[abind assertthat class clue clusterCrit clValid dplyr ggplot2 infotheo klaR magrittr mclust NMF purrr RankAggreg Rcpp stringr tidyr yardstick]; }; + diceR = derive2 { name="diceR"; version="1.1.0"; sha256="01jh69b7x4agw5w2y9dal9g0nbq8s1ff36vcz2xfsjc0vi76irfs"; depends=[abind assertthat class clue clusterCrit clValid dplyr ggplot2 infotheo klaR magrittr mclust NMF purrr RankAggreg Rcpp stringr tidyr yardstick]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; + dictionar6 = derive2 { name="dictionar6"; version="0.1.3"; sha256="1rg958py4pqghkid3830hla7vibvwsjhk75x55lxry5d8dp04m9f"; depends=[ooplah R6]; }; did = derive2 { name="did"; version="2.0.0"; sha256="11jfdh2c31dynajahrs0rncl8s8gb3lcdah0a0jvrsj5dh5m4yms"; depends=[BMisc DRDID ggplot2 ggpubr knitr Matrix pbapply]; }; + didimputation = derive2 { name="didimputation"; version="0.1.0"; sha256="0bdvhbxy57a5k7cahrhp8dzcskpbanb11497kg5mbw240ilgh6x3"; depends=[broom dplyr fixest glue magrittr Matrix Rcpp RcppArmadillo rlang stringr]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.2"; sha256="1i4icdfqvw7imaj1fh392zmzfyz8aqlv9s5naqxm1pm0lqfxl6ca"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; - dietr = derive2 { name="dietr"; version="1.1.1"; sha256="0grr9kii82xyyr9lkfyvlyfhybzyl287p298qm0zmc376syqkg5q"; depends=[rfishbase]; }; diezeit = derive2 { name="diezeit"; version="0.1-0"; sha256="0rq1k08byvqn99wpql7drnrcxlzcqrcxixh7bczbc8dv1hhsgk9i"; depends=[brew httr jsonlite]; }; difNLR = derive2 { name="difNLR"; version="1.3.7"; sha256="1fvil2zys3i8raqkmm8s5p6dyxziwcgchxr1m7q69flms6cpg8gv"; depends=[calculus CTT ggplot2 msm nnet plyr reshape2 VGAM]; }; difR = derive2 { name="difR"; version="5.1"; sha256="1cd5kaal5mjrbj1l9ki2wbqasdxphgc2yhaf4xwgbh1nr2zkhr02"; depends=[deltaPlotR lme4 ltm mirt]; }; @@ -7707,12 +8018,12 @@ in with self; { diffEnrich = derive2 { name="diffEnrich"; version="0.1.1"; sha256="19bq2frd2h8gh6mdy3pcwd54zzv170c0m1m3wnp5c4gadb9424qf"; depends=[dplyr ggnewscale ggplot2 here reshape2 rlang stringr]; }; diffIRT = derive2 { name="diffIRT"; version="1.5"; sha256="0kip6wz9l9q80qsqwf32pwz7d9vqin6dgfwf0nxlrlzf8xjsxgim"; depends=[statmod]; }; diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; - diffcor = derive2 { name="diffcor"; version="0.6.4"; sha256="1svhj5qispc2fwjf06pxg0z0q85161wqaq2sgix70j55z6xw8jgb"; depends=[]; }; + diffcor = derive2 { name="diffcor"; version="0.7.0"; sha256="1vghg12h6l0df50k18kfq6h86nf0vw7xgj46s9nycal3n7dacmmz"; depends=[]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; diffdf = derive2 { name="diffdf"; version="1.0.4"; sha256="03cr0gvspchdj49kiggsm6i9h5d9z07aswggj4n46lnyz52ihivj"; depends=[tibble]; }; diffeR = derive2 { name="diffeR"; version="0.0-6"; sha256="0ivdcfirs3jbd6m3rryq590szkhplm2kr9chjgcgd88ar5nrqfg7"; depends=[ggplot2 raster reshape2 rgdal]; }; diffee = derive2 { name="diffee"; version="1.1.0"; sha256="01lb1prz70mxgymhhsvx48kbfy69xyyaabsmfhf28af9wfb89662"; depends=[igraph pcaPP]; }; - diffeqr = derive2 { name="diffeqr"; version="1.1.0"; sha256="0m4433im5jy45bj6znbsf9la51hw232yc0rx2g3zdv5m8277c8my"; depends=[JuliaCall stringr]; }; + diffeqr = derive2 { name="diffeqr"; version="1.1.1"; sha256="1wkbb3nm0vjjk1pbfsbr167s038gqsb5mcpzj05wkk57b649nrhk"; depends=[JuliaCall]; }; diffman = derive2 { name="diffman"; version="0.1.1"; sha256="08b4kqxfg8pmyl2xg8flb581s9wnkdcy5rrmrxp8a89y265qmirx"; depends=[data_table dplyr igraph Matrix progress Rcpp sf tidyverse]; }; diffmatchpatch = derive2 { name="diffmatchpatch"; version="0.1.0"; sha256="064p2xzv0x890pw24lm9fmafp0x93f3yv77ms2zabzlclfylzzb7"; depends=[cli Rcpp]; }; diffobj = derive2 { name="diffobj"; version="0.3.4"; sha256="1z4yhfasjpi9rxl1lh9bny7yvs947a6hhc768azc1wwad748mk9q"; depends=[crayon]; }; @@ -7722,20 +8033,21 @@ in with self; { diffusionMap = derive2 { name="diffusionMap"; version="1.2.0"; sha256="1rvk7069brlm1s9kqj4c31mwwr3mw4hmhay95cjjjfmw5xclff2j"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.4"; sha256="1f3h387kblw1xzdnxphwgfl1n7f6i07kk7kfslvbfxkalbish6ii"; depends=[igraph Rcpp RcppEigen]; }; diffviewer = derive2 { name="diffviewer"; version="0.1.0"; sha256="1z6ri24sjqkm2rvih9ysx019pwpd1hv15rs96k4qqdspl0fms5a7"; depends=[htmlwidgets jsonlite]; }; - digest = derive2 { name="digest"; version="0.6.27"; sha256="0gr503pinailfglpfbzxprqw7w1jla8jr9nl856a4zch498zg1gl"; depends=[]; }; + digest = derive2 { name="digest"; version="0.6.28"; sha256="006vqwfrry84xn51lxlfalzn9yqr1k81s39r0zy251azx5sqqcja"; depends=[]; }; + digitTests = derive2 { name="digitTests"; version="0.1.0"; sha256="1pqzbsg7fabkbw3727c89rfxl6xc9l95cawjinqgq3g0fl2vr4hv"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; dimRed = derive2 { name="dimRed"; version="0.2.3"; sha256="110d6y83ib1nfpxzmvkvb3fn3brskwkdbsk4dqrdrswrd4znxrg6"; depends=[DRR magrittr]; }; - dimensio = derive2 { name="dimensio"; version="0.2.0"; sha256="1dirfr47h1j8kwqjh4nvqgh575c1vs2pg99lfmyg9lwvya8zpjqz"; depends=[ggplot2 rlang]; }; + dimensio = derive2 { name="dimensio"; version="0.2.2"; sha256="1340z0ibzmnbxghjw5w2afr6agwyz5kcan5hgibfi08y7axpdx4k"; depends=[ggplot2 rlang]; }; dimensionsR = derive2 { name="dimensionsR"; version="0.0.2"; sha256="1g9yjrq7xnqh427kzmhhmdavykzxidv51i2wx2w0kwhl6fqdd2fk"; depends=[httr jsonlite]; }; dina = derive2 { name="dina"; version="2.0.0"; sha256="1sq7998xc5qhvd8clc8r32ch7axinh2a2dc7i1w2p148wv130yhd"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; dineq = derive2 { name="dineq"; version="0.1.0"; sha256="1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl"; depends=[boot Hmisc]; }; dint = derive2 { name="dint"; version="2.1.3"; sha256="0nxppn7gx4sjwn7jns5bwbqfid3jkbsx2lxi0rjdkbsawy77fc85"; depends=[]; }; dipm = derive2 { name="dipm"; version="1.2"; sha256="1irrq1iidkqc6j7bg5c0fpgyfhnbay6b3fjv4h5amqgarchb1igg"; depends=[ggplot2 partykit survival]; }; - diproperm = derive2 { name="diproperm"; version="0.1.0"; sha256="0vk4c64nfp5km6xnpbw0x4mxnlkqa1hi80pa5lcmimgjymqm56sa"; depends=[dplyr DWDLargeR ggplot2 gridExtra lemon Matrix sampling SparseM usethis]; }; - dipsaus = derive2 { name="dipsaus"; version="0.1.5"; sha256="0csxwlalybwiy45bcd4ih86flk0bh9gwzzz6qrpm7ksazhzmvy4l"; depends=[base64enc base64url cli digest fastmap future future_apply jsonlite progressr R6 Rcpp RcppParallel rlang rstudioapi shiny startup stringr synchronicity]; }; + diproperm = derive2 { name="diproperm"; version="0.2.0"; sha256="0qh8zzpbsjfwh8q833n5pchb6dakqdza77ab7vmsidfbzndka11m"; depends=[dplyr DWDLargeR e1071 ggplot2 gridExtra lemon Matrix sampling SparseM usethis]; }; + dipsaus = derive2 { name="dipsaus"; version="0.1.8"; sha256="04lv74ifg3jpgnjs9as8gzcs3nqa1g0hcap8123xgs41mvcag6kz"; depends=[base64enc base64url cli digest fastmap future future_apply jsonlite progressr R6 Rcpp RcppParallel rlang rstudioapi shiny startup stringr synchronicity]; }; diptest = derive2 { name="diptest"; version="0.76-0"; sha256="10629vwn6r2949jjrmj5slbb5v0vnm3w0v8mrl7ws68m2sxmx2jh"; depends=[]; }; dipw = derive2 { name="dipw"; version="0.1.0"; sha256="0nxjwiffi1ivafzha3c35kjk36ai7na0nbfl6x3gpsi2km7b84nd"; depends=[glmnet Matrix Rmosek]; }; directPA = derive2 { name="directPA"; version="1.5"; sha256="0k66x64fi26zlm82v59ya7x6l7ba3hpa5v9dq2ykb20a8zl6spla"; depends=[calibrate plotly]; }; @@ -7744,9 +8056,10 @@ in with self; { dirichletprocess = derive2 { name="dirichletprocess"; version="0.4.0"; sha256="1gspaynxq5czvnpni57swcqqy17lryjlh3cn9x0mghl527rkbpna"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - disaggR = derive2 { name="disaggR"; version="0.2.1"; sha256="1i298ah7446yg02q2af0rn0miking4i1mxizdgldq8ghyw81m4wk"; depends=[ggplot2 rmarkdown scales shiny]; }; + disaggR = derive2 { name="disaggR"; version="1.0.2"; sha256="1vm9p0kil0yr18g1d8xqkf89la3fnxz6r8b6hjlbpv96j3gj0zjk"; depends=[RColorBrewer]; }; disaggregation = derive2 { name="disaggregation"; version="0.1.3"; sha256="04wmwwhmcgi1cdr8iyhilsphpzb7r5xs04vhqx5z01y7cgardivx"; depends=[cowplot doParallel dplyr foreach ggplot2 maptools Matrix raster RcppEigen rgdal rgeos sp sparseMVN splancs TMB]; }; disastr_api = derive2 { name="disastr.api"; version="1.0.5"; sha256="1h5i6pwak16w0gdk8qjz4w9qpffjhzlsrvjkb4acrvgjgrsvz9kp"; depends=[httr jsonlite]; }; + discAUC = derive2 { name="discAUC"; version="0.4.0"; sha256="1l80xz5wrcikrs2b2i05jq3qkx468k891gwmmy5d1mymp4si3z0h"; depends=[dplyr glue rlang tibble]; }; discSurv = derive2 { name="discSurv"; version="1.4.1"; sha256="0xi016ah8xc8bv92qvyslvx30anncrki49ccg3qw79yh5vzns1wk"; depends=[data_table functional mgcv mvtnorm]; }; discfrail = derive2 { name="discfrail"; version="0.1"; sha256="1ll8c0fwwmz2yw8w582422r8bk9lr1570d7m7w2n1flrnqpqmk8j"; depends=[Matrix numDeriv survival]; }; discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; @@ -7755,43 +8068,44 @@ in with self; { disclapmix = derive2 { name="disclapmix"; version="1.7.3"; sha256="0hh20ff3szh9s9r1hdymk73ysn0v5lh2gfzgqpvfvdhcc5z8xjk7"; depends=[cluster disclap MASS Rcpp RcppProgress]; }; discnorm = derive2 { name="discnorm"; version="0.1.0"; sha256="00dkdxvj0fmlmr9l34ajvfv1jzlnyr9sdnnpgik8lhcj5a7h8l6f"; depends=[arules lavaan MASS pbivnorm psych sirt]; }; disco = derive2 { name="disco"; version="0.6"; sha256="1abvhf0yb4mw02j1krjb7q68jpwdnl2narcalf3vkjcbflcp76z3"; depends=[ggplot2 RColorBrewer tmod]; }; - discord = derive2 { name="discord"; version="1.0.0"; sha256="1rxmc8jzifdyn8gf5z3xg5bfk9jv961dx0fcjf3axmzbw54h5s09"; depends=[broom dplyr janitor magrittr purrr rlang]; }; - discourseGT = derive2 { name="discourseGT"; version="1.1.5"; sha256="0iwvxjd0zc9ahi4j1l7q08dwx9vfd4vcnzcv7knklgncnz14h5yc"; depends=[BiocManager dplyr GGally ggplot2 ggpubr ggrepel igraph network sna]; }; + discord = derive2 { name="discord"; version="1.1.0"; sha256="0is9gwj09zj25hklsxgi3k7ypq2qp2yx0vir6wgpnd30wa11zs5h"; depends=[]; }; + discourseGT = derive2 { name="discourseGT"; version="1.1.6"; sha256="1nq3pgd6jrv7v7gal7ba2gxq2255pjdi3vsnkdj73dwswzvq7w7k"; depends=[BiocManager dplyr GGally ggplot2 ggpubr ggrepel igraph network sna]; }; discoveR = derive2 { name="discoveR"; version="2.2.2"; sha256="1p13n7fkhjqic6hjp70k7sg911zsvivqvrxi7ag8mxkprpzgv5j7"; depends=[cluster colourpicker config DT echarts4r ggdendro ggplot2 golem htmltools htmlwidgets plotly rlang scales shiny shinyAce shinycustomloader shinydashboard shinydashboardPlus shinyjs]; }; discoverableresearch = derive2 { name="discoverableresearch"; version="0.0.1"; sha256="0gw9fpmsqj1cj2qr7hqr86j28kjn3qfykdkkxrazj3dnv981xhhy"; depends=[dplyr magrittr ngram readr stopwords stringdist stringi synthesisr tm]; }; discreteMTP = derive2 { name="discreteMTP"; version="0.1-2"; sha256="13qsf1kc3rph0kkdkz31qj072www5dwjyk73lfpy141rzhcn1v1x"; depends=[]; }; discreteRV = derive2 { name="discreteRV"; version="1.2.2"; sha256="1lhf67cccr96zl3j1sysh2bv0pbgvkbgjdzm35fvrdm7k74ypjsi"; depends=[MASS plyr]; }; discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.7"; sha256="01x3qfjj7dwv0m9q8zdhfrpbj9ys9y5p7d3z8ywjrqy4jw88svjs"; depends=[igraph Rcpp RcppEigen sparsebnUtils]; }; discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; - discrim = derive2 { name="discrim"; version="0.1.1"; sha256="1la96y8wy04p414njnzjsk5zx199qdix5hqbb0pv5k74mr1g2cqv"; depends=[dials parsnip purrr rlang tibble withr]; }; + discrim = derive2 { name="discrim"; version="0.1.3"; sha256="1m54qq2a9k5xphmz7a1701vxvfzyb0g477mb74x0s152gj49xcm0"; depends=[dials parsnip purrr rlang tibble withr]; }; disdat = derive2 { name="disdat"; version="1.0-0"; sha256="1q8v40m0vjni3kx0f04qb99adxcx783p9lfixvvq6viz13v1ygcw"; depends=[]; }; - diseasemapping = derive2 { name="diseasemapping"; version="1.5.0"; sha256="0rq541n5nb9m3d1k04sml74r7p4j0648w28y5bl016rm4wghd3n6"; depends=[sp]; }; - diseq = derive2 { name="diseq"; version="0.2.1"; sha256="09m4nl15y1hllnp6b7v84ryfw8rl7g25h9f7qbp0f197rv7yqp0z"; depends=[bbmle dplyr magrittr MASS png Rcpp RcppGSL RcppParallel rlang systemfit tibble tidyr]; }; - disk_frame = derive2 { name="disk.frame"; version="0.4.1"; sha256="1ackk0qm2jc39112w48a6nciah4bgh2y0x8rz1mclivqrmlx8z1s"; depends=[benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; + diseasemapping = derive2 { name="diseasemapping"; version="1.5.1"; sha256="0pqilkl56753j1fxy6mh7nx24n6qg2j5faxyxj6abcm6xrnkhmy9"; depends=[rgeos sp]; }; + diseq = derive2 { name="diseq"; version="0.3.1"; sha256="1d5cff0igmyd6l9xi0z4nz8r5pygk4dldl53h61jm6zwv2xxrfml"; depends=[bbmle dplyr magrittr MASS png Rcpp RcppGSL RcppParallel rlang systemfit tibble tidyr]; }; + disk_frame = derive2 { name="disk.frame"; version="0.5.0"; sha256="127ms95z23053phlbh2arhvydj319vg04i35nsdl8pix23zgh9an"; depends=[benchmarkme bigreadr bit64 crayon data_table dplyr fs fst furrr future future_apply globals glue jsonlite pryr purrr Rcpp rlang stringr]; }; diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.3-3"; sha256="1jj9d78f251bxgrwbv1ycn677qnhvl40bfan12x8fhlaq4d36rgx"; depends=[raster Rcpp sp]; }; + disordR = derive2 { name="disordR"; version="0.0-7"; sha256="0w0lbir5bc6sgwyfb0mp6r299hdjxd1g68sa51hcnwjq8b8w7mr1"; depends=[digest]; }; dispRity = derive2 { name="dispRity"; version="1.6.0"; sha256="0fwwjfz4ljlr9135r9kdkd3djkawz2wjf8ki2xdjsbfh6s0c7gnc"; depends=[ade4 ape castor Claddis geiger geometry geoscale mnormt phangorn phyclust scales vegan]; }; disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; dispmod = derive2 { name="dispmod"; version="1.2"; sha256="16r6is0pchzc9mxpz0c44f72j76vsh3j9damalcxajrha06dkdq4"; depends=[]; }; disposables = derive2 { name="disposables"; version="1.0.3"; sha256="0q5wacjclspn2fh7z1pg2l67ll51n75wck5h2fdq2vxy3qn3vwis"; depends=[]; }; + dispositionEffect = derive2 { name="dispositionEffect"; version="1.0.0"; sha256="0vx87xylpx3np6afwwylzwp0nb9g8r04ngn8mgr88ycys815fkqw"; depends=[dplyr lubridate magrittr progress purrr rlang]; }; dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; }; dissever = derive2 { name="dissever"; version="0.2-3"; sha256="1lgs5nmv3lpm4gsryxvcwiwibvvg9flv23q8maisp77x49c18qcp"; depends=[boot caret dplyr foreach magrittr plyr raster sp viridis]; }; distTails = derive2 { name="distTails"; version="0.1.2"; sha256="10p7rfqfkhcwq10lhz3cq9i4k1jdccks4y3791lajljsxz5jrca4"; depends=[ercv gsl MASS]; }; distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; }; distances = derive2 { name="distances"; version="0.1.8"; sha256="0mmwks1qzx680izv26x8mcfs4i16mnmf6s9arz1ssx470xwxljxy"; depends=[]; }; distantia = derive2 { name="distantia"; version="1.0.2"; sha256="12d6xzhcxs3xxyj82ih6chrr638siy45gna1s22vhnqvjd5jixc6"; depends=[arrangements data_table doParallel fields foreach iterators plyr RColorBrewer viridis]; }; - distcomp = derive2 { name="distcomp"; version="1.1"; sha256="1b2rxn7x6sa3kiip1sv8yd556mkjqvq38v3cycb5084x3k6prhp4"; depends=[digest httr jsonlite R6 shiny stringr survival]; }; + distcomp = derive2 { name="distcomp"; version="1.3-1"; sha256="06vkyl0r9s1ci8cq6mqc54z5drcw0mabn44864230jd4b3466ifl"; depends=[digest dplyr gmp homomorpheR httr jsonlite magrittr R6 rlang shiny stringr survival]; }; distcrete = derive2 { name="distcrete"; version="1.0.3"; sha256="0sa6z2mpmk51ig1r7bmpbyv2jd8z6z7mixki2vlq1kybg8cx3wmi"; depends=[]; }; distdichoR = derive2 { name="distdichoR"; version="0.1-1"; sha256="0v19m3n1jgipg65yrv75rm4v27b5aq58cbsmbp7lxvfxmj5ra328"; depends=[boot emmeans nlme sn]; }; - distdrawr = derive2 { name="distdrawr"; version="0.1.3"; sha256="1c8wznfml8k5gwyanfg7rqr22a96xx8rgm7f4z3bv5gsgsbps49y"; depends=[]; }; distfree_cr = derive2 { name="distfree.cr"; version="1.5.1"; sha256="0h7cywxnasxmqnl9f2f9wp4viwvv72hjx2drr78prqy3nn3lvqwx"; depends=[]; }; distill = derive2 { name="distill"; version="1.2"; sha256="126ihjxsz8s6phqwapjnmzdklzz2mvr6phmh5kxpwq271fi8xq69"; depends=[base64enc bookdown digest downlit htmltools jsonlite knitr lubridate mime openssl png rmarkdown rprojroot rstudioapi stringr whisker xfun xml2 yaml]; }; - distillery = derive2 { name="distillery"; version="1.2"; sha256="10nhh9p0hp294pp4aav0y0zsmir2qbn05sf3k52rmzmm36q2kc8y"; depends=[]; }; + distillery = derive2 { name="distillery"; version="1.2-1"; sha256="1ymmxyamkq0zbz2m4gllln1ihks2hcib6gs0mls92as79srz122b"; depends=[]; }; disto = derive2 { name="disto"; version="0.2.0"; sha256="09pafy8y1ifgglqmal32dy34acx06ypsq2bgwsn6fjiqr9kw401j"; depends=[assertthat broom dplyr factoextra fastcluster fastmatch ggplot2 pbapply proxy tidyr]; }; distory = derive2 { name="distory"; version="1.4.4"; sha256="1ljrs91h4v1h5lb295hjki8bmra2lg3d1bn5x731pnv43pf3ck06"; depends=[ape]; }; distr = derive2 { name="distr"; version="2.8.0"; sha256="1dyff4m33xmw6hxb3jxzr8vvajg3qz3rfcrfxjxwsswlddfz0zdv"; depends=[MASS sfsmisc startupmsg]; }; - distr6 = derive2 { name="distr6"; version="1.5.2"; sha256="1w1wrfnqxbr9aiif7hza9bnmbn1vmglcbmij7wkk662hvkg1j6z5"; depends=[checkmate data_table R6 R62S3 Rcpp set6]; }; + distr6 = derive2 { name="distr6"; version="1.6.0"; sha256="1m99s79ymw71a2lpl5k48q49d1krxq24x2n3p6mbhall8kjgv769"; depends=[checkmate data_table param6 R6 Rcpp set6]; }; distrDoc = derive2 { name="distrDoc"; version="2.8.0"; sha256="1iq2gbfbsf3h279yh3fnqsi39gdw15vc6r1g33xcb8kgmmqmvf0p"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg]; }; distrEllipse = derive2 { name="distrEllipse"; version="2.8.0"; sha256="1ymfa8xpgs8zjp4psiwmll5z0vji496fivxmcavspzxy31cw70wx"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; distrEx = derive2 { name="distrEx"; version="2.8.0"; sha256="1gwhsnlrnzyp2x97d9wfdy5pa9z3q5il934wjv4kxs9wsvkwsr5h"; depends=[distr startupmsg]; }; @@ -7800,7 +8114,7 @@ in with self; { distrSim = derive2 { name="distrSim"; version="2.8.0"; sha256="0g16mljlz7fnb5k6c9h5vplm3n51sdbybv9cifbia0y6p9zml383"; depends=[distr setRNG startupmsg]; }; distrTEst = derive2 { name="distrTEst"; version="2.8.0"; sha256="06rdcwfgbhc81zqisg414nj0kji59xvhm782b63hk54a8b2zwhh5"; depends=[distrSim setRNG startupmsg]; }; distrTeach = derive2 { name="distrTeach"; version="2.8.0"; sha256="1qgkd4yipk29q8k334fz97n6dxlxnsback7v5a05m6ragc37wzag"; depends=[distr distrEx startupmsg]; }; - distreg_vis = derive2 { name="distreg.vis"; version="1.7.1"; sha256="1y4axhv7hxvzq1ws7bja51m8z4x8a3xdvbwpwr4iqvsk4x9h59iy"; depends=[bamlss betareg formatR gamlss gamlss_dist ggplot2 magrittr rhandsontable shiny]; }; + distreg_vis = derive2 { name="distreg.vis"; version="1.7.2"; sha256="0wyxw479jvh007hdyhyaqz8cn3ng03612p7bms1d6l6jk7dlncf9"; depends=[bamlss betareg formatR gamlss gamlss_dist ggplot2 magrittr rhandsontable shiny]; }; distribglm = derive2 { name="distribglm"; version="0.4.1"; sha256="09gpkp7s8y2dcpjhqgi2nl6j8pmd500y89d8c8x8sxmh5mg8n5si"; depends=[readr]; }; distributional = derive2 { name="distributional"; version="0.2.2"; sha256="0ps30ijlf0xwranxkq1z29d76d3zgy8drwxpnxp6ffmyma8mm3h2"; depends=[digest ellipsis farver generics ggplot2 lifecycle numDeriv rlang scales vctrs]; }; distributions3 = derive2 { name="distributions3"; version="0.1.1"; sha256="06wfyn37x2r00szfzgjpcxy5fhx72p2pf44llpymcsjyp8k790na"; depends=[ellipsis glue]; }; @@ -7810,35 +8124,40 @@ in with self; { distrr = derive2 { name="distrr"; version="0.0.6"; sha256="04lhrc92y6dqnfpqlmynjvn2dndzkknnvwsr5pf73dfpgv7n3s1f"; depends=[dplyr magrittr rlang tidyr]; }; disttools = derive2 { name="disttools"; version="0.1.7"; sha256="1wdcggphyxy58zyqdsyz2z3q4rb69wady63l79s1ivjwzgjrsxmi"; depends=[]; }; dittodb = derive2 { name="dittodb"; version="0.1.3"; sha256="0wkiy3vgqrpmc34hxw30rfgg01d941gxz8fr2h9i9gvddnxnywdc"; depends=[DBI digest glue lifecycle testthat]; }; + div = derive2 { name="div"; version="0.3.1"; sha256="1k4c34wpwfj7yqnk1x9sjzn3dc2vdzhpy8g4c00aqs3nbgcknyn8"; depends=[dplyr ggplot2 gridExtra kableExtra magrittr plotly pryr rlang rpart stringr tibble tidyr tidyverse]; }; divDyn = derive2 { name="divDyn"; version="0.8.1"; sha256="0ghcipx0wyp1750ggys8zq8nxpqm7hac6xvkyjs2dgqjmlh3mzz2"; depends=[Rcpp]; }; - diveMove = derive2 { name="diveMove"; version="1.5.4"; sha256="0niazlpi7n41fas8hap9h3xxyk0c011062xbs9zwdlzfk9vabylb"; depends=[geosphere KernSmooth plotly quantreg uniReg]; }; + diveMove = derive2 { name="diveMove"; version="1.6.0"; sha256="0ddlc89wi76kja8zz9j72p57hz3rw9xjzrj6k5h60573c5b9b1ig"; depends=[geosphere KernSmooth plotly quantreg uniReg]; }; + diveR = derive2 { name="diveR"; version="0.1.1"; sha256="0fkwvb43n4jiqm87jlrydy5lyf632qw98qzypgprg61vjcnp9wr0"; depends=[cli crayon ggmulti loon loon_data loon_ggplot rstudioapi zenplots]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; }; - diverge = derive2 { name="diverge"; version="1.0.4"; sha256="18abm3348rkd4k2hyf8nykpis1m0ga16d4nprdc5xjj2ciaf2xa5"; depends=[truncnorm]; }; + diverge = derive2 { name="diverge"; version="2.0.1"; sha256="0pa60dwnpsks7y19msgz259g6wsjhbv9nyaq43d1g75hy9ipdrg4"; depends=[truncnorm]; }; diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; }; - diversitree = derive2 { name="diversitree"; version="0.9-15"; sha256="1sk3sgn5hi04978s5s7gy6pzp28g3v9rglmiamlgs96c9wyyyff7"; depends=[ape deSolve Rcpp subplex]; }; + diversitree = derive2 { name="diversitree"; version="0.9-16"; sha256="0rzrk7xsn4gy271pbcw3azndhx0c06bmsgrg6libjmlfnmq6j8sc"; depends=[ape deSolve Rcpp subplex]; }; diversityForest = derive2 { name="diversityForest"; version="0.3.1"; sha256="12xwvzdl2rbr76izjnq6ygcrlf522vpgnrm2xz2nl1rwl9xr85im"; depends=[gam ggplot2 ggpubr MapGAM Matrix nnet RColorBrewer Rcpp RcppEigen rlang rms scales sgeostat survival]; }; divest = derive2 { name="divest"; version="0.10.1"; sha256="0gbzji3v4qnv49mqqpadjskz265iwdvvd3mqwhmcq72125jh86sq"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.1"; sha256="06c4kjl6llvvdr2gk480jcmj2abmqwph7x4vk5nflxm7piimvg7v"; depends=[cluster]; }; + divseg = derive2 { name="divseg"; version="0.0.4"; sha256="0iwxckdfsb28wgpv6d1r8idyn974c38ylpiaxsvn9m8x1wnpnbp7"; depends=[dplyr magrittr rlang sf tibble tidyselect units]; }; dixon = derive2 { name="dixon"; version="0.0-7"; sha256="0crpzkshil8836axcywj0r95qmkv31vrw9gqnjqj3xgx6hml6xym"; depends=[spatstat spatstat_geom splancs]; }; - dixonTest = derive2 { name="dixonTest"; version="1.0.2"; sha256="04d66nf47mllk5madqn6k36vc1gq2syp7kbif8cnf6imxr98xx50"; depends=[]; }; - diyar = derive2 { name="diyar"; version="0.3.0"; sha256="0v3i9m987x8akj6aqlb55l8bc6whha75hljai45w8mbqnf0wrsgv"; depends=[ggplot2 Rfast rlang]; }; + dixonTest = derive2 { name="dixonTest"; version="1.0.3"; sha256="1a3yc30g5rbb0jhm2b0iir5i1dy4jyl67spkhx4yysg4snz131wv"; depends=[]; }; + diyar = derive2 { name="diyar"; version="0.3.1"; sha256="1hllrwljmddf1j3k05vwasm5pryghbaylnyx107afhjhrar0l850"; depends=[ggplot2 Rfast rlang]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; dkanr = derive2 { name="dkanr"; version="0.1.3"; sha256="1zic7qhwq3s9w70zi1f6qyf7pzm69k5a1p5fd4n3z4nbga54njxd"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; dlbayes = derive2 { name="dlbayes"; version="0.1.0"; sha256="058kkh67npai2ffrjdpjn4pzj8f233znl16nj6yx8wz8lkb17cb0"; depends=[expm GIGrvg glmnet LaplacesDemon MASS]; }; dlib = derive2 { name="dlib"; version="1.0.3.1"; sha256="1rchl4f3zj0azz8d4n139daba2gz6vnm60jq45vgc9gphk2mrnnb"; depends=[Rcpp]; }; dlm = derive2 { name="dlm"; version="1.1-5"; sha256="1aksm66sfa7ipl5xgs4j5giac7q2m744wjl40mva56xn6i674h4r"; depends=[]; }; - dlnm = derive2 { name="dlnm"; version="2.4.5"; sha256="0cblfj37klsz7ciwgh07ckrs6nvbcmdwgvp94sa5yk3l3sy444in"; depends=[mgcv nlme tsModel]; }; - dlookr = derive2 { name="dlookr"; version="0.4.4"; sha256="11qdfjxvx3rg1f2gzsavyy008wyzf9dbzjdvf0ah8qkr9s4pic17"; depends=[cli corrplot dplyr extrafont ggplot2 gridExtra hrbrthemes kableExtra knitr magrittr mice partykit prettydoc purrr RcmdrMisc rlang rmarkdown tibble tidyr tidyselect]; }; + dlnm = derive2 { name="dlnm"; version="2.4.6"; sha256="0crw5qin6rmqqva872225l3cv1x1bpjcywysmk83lnc6xsf6p2js"; depends=[mgcv nlme tsModel]; }; + dlookr = derive2 { name="dlookr"; version="0.5.1"; sha256="1rlm6kwzvng3dhr6lrd6fklnz4pva8pda0rkbvg8x1k4skyw27rk"; depends=[dplyr extrafont ggplot2 gridExtra hrbrthemes htmltools kableExtra knitr mice pagedown partykit purrr reactable rlang rmarkdown shiny tibble tidyr tidyselect]; }; + dlr = derive2 { name="dlr"; version="1.0.1"; sha256="13gr8rk8igbypq9mg00pyk2pjczxr1ghkj5287gijxnxch7zdknc"; depends=[digest fs rappdirs rlang]; }; dlsem = derive2 { name="dlsem"; version="2.4.6"; sha256="1h3bwqqpfjkl41b2mbfhsj0pi9kri0h0i28wiid6arjrmm87nsf8"; depends=[graph Rgraphviz]; }; dlstats = derive2 { name="dlstats"; version="0.1.4"; sha256="1j415v3kajn269md046b05pwklqwm4rwk2f7q3mwax9yx4m5nc0n"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; - dm = derive2 { name="dm"; version="0.2.0"; sha256="082gnz8ylcgrcvmfshvs8163vjs6vd9855fk76vn0z44jx8j67f1"; depends=[backports cli DBI dplyr ellipsis glue igraph lifecycle magrittr memoise pillar purrr rlang tibble tidyr tidyselect vctrs]; }; + dm = derive2 { name="dm"; version="0.2.3"; sha256="0m270zzhj4vj8glamk3kyizj8x5q8ppmmzwszjwkmx660x9fy2wk"; depends=[backports cli DBI dplyr ellipsis glue igraph lifecycle magrittr memoise pillar purrr rlang tibble tidyr tidyselect vctrs]; }; dma = derive2 { name="dma"; version="1.4-0"; sha256="003snr09hazszwqnvjrbv8vyz6ihgcfcfhrlshg451dddn920615"; depends=[MASS]; }; dmacs = derive2 { name="dmacs"; version="0.1.0"; sha256="1prw6h8sj6fcpajg6xwqhi8v5jfl74mbjdjrdy524miw56fh9h0r"; depends=[lavaan MplusAutomation]; }; dmai = derive2 { name="dmai"; version="0.4.0"; sha256="0ma89jl0l598sffpikvjj40f2djjcnjq29k6y1bav4dm2g51qgmq"; depends=[dplyr ggplot2 magrittr stringr tibble tidyr]; }; dmbc = derive2 { name="dmbc"; version="0.4.0"; sha256="1m8zwy18phlxpmlp8rf07d615fjg15gqs5wdfm78d49266032jay"; depends=[abind bayesplot coda ggplot2 ggrepel MCMCpack modeltools pcaPP Rcpp RcppArmadillo RcppProgress robustbase]; }; - dmdScheme = derive2 { name="dmdScheme"; version="1.2.6"; sha256="093v2ypqmk6p23a8arl49c4fd60c8mgg6ns0daikjmp9qdm880aa"; depends=[digest EML knitr magrittr rappdirs readxl rlang rmarkdown stringr writexl xml2 yaml]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; + dmlalg = derive2 { name="dmlalg"; version="1.0.1"; sha256="1jgypgclv9609i2vfwskjy61vl3giv7ia79d3d20ly324khxalhb"; depends=[glmnet lme4 matrixcalc randomForest]; }; dmm = derive2 { name="dmm"; version="2.1-7"; sha256="0zn7d2lr2vig8q6h5dd5zk7ra1f0mkm6pszl3v06aghcflg63ng3"; depends=[MASS Matrix nadiv pls robustbase]; }; + dmri_tracking = derive2 { name="dmri.tracking"; version="0.1.0"; sha256="0aij0n5p6cp75r5b3bfpmhnmz2nixbb4kwacixg66g6kilwj3sis"; depends=[rgl]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmtools = derive2 { name="dmtools"; version="0.2.6"; sha256="0z77whal18sxmfqalv39w85vnc84c838yh3dp144v7w198n095fy"; depends=[dplyr httr lubridate magrittr progress purrr readxl tibble tidyr]; }; dmutate = derive2 { name="dmutate"; version="0.1.3"; sha256="1dxx4v9fg0cd2m5lwk3j6n9g6n9zqr7rs75yiz3m3q8cpw1pjqpk"; depends=[dplyr MASS]; }; @@ -7846,48 +8165,51 @@ in with self; { dnet = derive2 { name="dnet"; version="1.1.7"; sha256="05mqgp8x2h6vjf8j9466kpng7bbga134c2y808qgdmjdnv9fcaxc"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.5"; sha256="16s06jvwmvhxgvrmfav1xfszjrn7j2cm4jw5xyx6w5lb5434kzcq"; depends=[arm ergm glmnet igraph network sna]; }; - do = derive2 { name="do"; version="1.7.0.0"; sha256="14z293acqxf100qlhmrrkf88fxzix0a02hbpi5f85kkaarhnis0q"; depends=[data_table plyr reshape2 rvest tidyr tidyselect tmcn xml2]; }; - doBy = derive2 { name="doBy"; version="4.6.10"; sha256="0vqmmxhr3mx8yyl38abvy0zqswfgn7jqgwvc5gdchdiq6v8flnfr"; depends=[broom curry Deriv dplyr ggplot2 magrittr MASS Matrix microbenchmark pbkrtest tibble]; }; + do = derive2 { name="do"; version="2.0.0.0"; sha256="16c6ksdas678k1285vk526ga3qkfb658nq4j5z9safjkyl1d5lrp"; depends=[crayon data_table desc httr openxlsx plyr reshape2 rstudioapi rvest stringr tidyr tidyselect tmcn usethis xml2]; }; + doBy = derive2 { name="doBy"; version="4.6.11"; sha256="1xhjh2d7zfgw8wbcj5yfscvmwbjar1w544ika13da69dydm44j81"; depends=[broom curry Deriv dplyr ggplot2 magrittr MASS Matrix microbenchmark pbkrtest tibble]; }; doFuture = derive2 { name="doFuture"; version="0.12.0"; sha256="1hqzdlgcrc5l6xjwdylsc9iiysi2wx8k1j1vmw3wryj26057c9y4"; depends=[foreach future globals iterators]; }; doMC = derive2 { name="doMC"; version="1.3.7"; sha256="0kdmfhp5m1wisjbfyl9d040jrmjmhcgjb0vdi536g2i9vixb5yny"; depends=[foreach iterators]; }; + doMIsaul = derive2 { name="doMIsaul"; version="1.0.0"; sha256="1p8abzihrqygf17b6rkmdmg2iv56kd2n3v4dgzwl5fc5kk8gybq0"; depends=[aricode arules clusterCrit dplyr ggplot2 Gmedian MASS mice NbClust ncvreg plyr scales survival withr]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; doParallel = derive2 { name="doParallel"; version="1.0.16"; sha256="1cjf0mxrxgls5pl7aj22fv9j488craib1wkc9np4f3gkckwjdfzi"; depends=[foreach iterators]; }; doRNG = derive2 { name="doRNG"; version="1.8.2"; sha256="1jff27zzrvd1fd61x2m9468h8xn3s1c9f6wibviy5zdhj5dx9s9k"; depends=[foreach iterators rngtools]; }; + doRedis = derive2 { name="doRedis"; version="3.0.0"; sha256="05xvan8djif0mkvk32lg20ffrb6x013a5ia1wc1k0g5n4jkg6rs4"; depends=[foreach iterators redux]; }; doSNOW = derive2 { name="doSNOW"; version="1.0.19"; sha256="0f07b38cl7s61vwzkyqkzzsic9g4sw9k6ndbxk3g90l4ca0d1ljc"; depends=[foreach iterators snow]; }; dobin = derive2 { name="dobin"; version="1.0.2"; sha256="1vhvwdl7a8bf4q64jz8a6afm3smdn3jgxvs17jjlilarpdazl3p5"; depends=[pracma RANN]; }; dobson = derive2 { name="dobson"; version="0.4"; sha256="0xfn7s3wzrv1md40bdjrnjfiqyxg5c6lrcpnvayjdgrhxq161hhq"; depends=[]; }; - doc2concrete = derive2 { name="doc2concrete"; version="0.5.3"; sha256="0d10kjjnjcnljk4r5ip3a4z3h55if20flidiy26v352qf4593lnz"; depends=[english glmnet quanteda SnowballC stringi stringr textstem tm]; }; + doc2concrete = derive2 { name="doc2concrete"; version="0.5.4"; sha256="0ng1dsczyk6mxg5x5c4ms57yk7zhyn16alj2xd0h21hhbx3n2m9g"; depends=[english glmnet quanteda SnowballC stringi stringr textstem tm]; }; doc2vec = derive2 { name="doc2vec"; version="0.2.0"; sha256="0249hm0103kxxsi4gks4h20wf6p00gbrk9jf8c148mbja1l56f6v"; depends=[Rcpp]; }; - docdescriptR = derive2 { name="docdescriptR"; version="2020.1.0"; sha256="02sgbzhvjayf39r5lrx3krihzm263fnvwpjqm0jsqrq4d8pps3hb"; depends=[broom DescTools dplyr flextable magrittr nortest officer plotrix Rdpack tictoc]; }; - docinfeR = derive2 { name="docinfeR"; version="2020.1.0"; sha256="08xa3f27giad3fikk8jywpm2p843zlb8a9znq3x47x6ivwybfllp"; depends=[broom flextable nortest officer Rdpack tictoc]; }; - dockerfiler = derive2 { name="dockerfiler"; version="0.1.3"; sha256="128648s9lj96p3nlxwy4gs108w5kjcg6w48nfx3r52gb8w2z7948"; depends=[attempt glue R6]; }; + dockerfiler = derive2 { name="dockerfiler"; version="0.1.4"; sha256="1gx72dr2rs2mm25s2f45xfr1c1rkxsmwdawh0c7jvg5r71wsjbpa"; depends=[attempt cli desc fs glue jsonlite pkgbuild R6 remotes usethis]; }; docknitr = derive2 { name="docknitr"; version="1.0.1"; sha256="1mhdjv6yznzyx911f0m3m0i7jlzj7h12ikkxb9b6zj68bdplv30b"; depends=[knitr rstudioapi sys]; }; + doconv = derive2 { name="doconv"; version="0.1.3"; sha256="0aqdylp3lzn1jl96sq4xaipyxpi1hai0n9msk9gfm20gdpsnn1w5"; depends=[locatexec magick pdftools rappdirs]; }; docopt = derive2 { name="docopt"; version="0.7.1"; sha256="1zxhwizs916qm5by7nfslqnarl2q5202xc2azlhrnzk0wj3khiwz"; depends=[]; }; docopulae = derive2 { name="docopulae"; version="0.4.0"; sha256="186mfiy4ygx6spnv7yrm5h0k6nf2g1xhk1l05iij39j5al5d9j21"; depends=[]; }; + docreview = derive2 { name="docreview"; version="0.0.1"; sha256="0cmgl1q1whb38iiljaz0f5vyxniyaaxm8xpbzd56cayqgbvl92b8"; depends=[cli parsermd purrr quanteda quanteda_textstats rlang stringr yaml]; }; docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - document = derive2 { name="document"; version="3.3.1"; sha256="0sb705wah02r5hy2ivbjailk8fb1wxcvnn1zslwjiim0mxrk1354"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; + document = derive2 { name="document"; version="3.3.2"; sha256="1abkgady7viqmip5080hwrl0jv1279xzj7qak0jvs0zhqq2zkn0z"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; documenter = derive2 { name="documenter"; version="0.1.1"; sha256="0y6zrvmb9bhc1ni4v89h9pq5ara8p2v4b35ylasia5s9x1y93mcp"; depends=[htmltools magrittr officer xml2 yaml]; }; docxtools = derive2 { name="docxtools"; version="0.2.2"; sha256="0ds8qy21x7cq9qmnn6gggzf8kxdphq7nf2mx5gqx829zgkripsfq"; depends=[dplyr ggplot2 lubridate purrr rlang stringr tidyr]; }; docxtractr = derive2 { name="docxtractr"; version="0.6.5"; sha256="1kki49g0sfhbx2d4swrkv21akws8ayrsd4h3v148xmzdlsrvhhiw"; depends=[dplyr httr magrittr purrr xml2]; }; - dodgr = derive2 { name="dodgr"; version="0.2.8"; sha256="1xbsdrpqk2d2k9wykv7wxdzimnzyvdg6srm2ap80r9iirismsnzb"; depends=[callr digest magrittr osmdata Rcpp RcppParallel RcppThread]; }; + dodgr = derive2 { name="dodgr"; version="0.2.9"; sha256="0v0klm99jp342ld53cqd1qxfsg2ppkmgnx3k88h22yqkj3lxr8bs"; depends=[callr digest magrittr osmdata Rcpp RcppParallel RcppThread]; }; doebioresearch = derive2 { name="doebioresearch"; version="0.1.0"; sha256="1rmvb6pa71frvjszpsjaw3ahm70kyykrq6zfjqk8smgcg397k9pi"; depends=[agricolae]; }; doex = derive2 { name="doex"; version="1.2"; sha256="1r999z30ipa04pgck0hfalqxihb1bj8sdhlkkhf4plb7maaz3qm3"; depends=[]; }; dominanceanalysis = derive2 { name="dominanceanalysis"; version="2.0.0"; sha256="0qxldvlgbysy9j17kb0a9p132a04a4j12h4m0r70zv2752fj24c0"; depends=[]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; - domir = derive2 { name="domir"; version="0.0.1"; sha256="1ydhvx24arb82z67ff4gmc5bmf4afnwqmp1y2wsk2jxj3s327598"; depends=[]; }; + domir = derive2 { name="domir"; version="0.1.0"; sha256="0392pfdrfyxfdgfdg5vzmz5bdc0kpzkrly6khcdkc734l3kyd266"; depends=[]; }; donut = derive2 { name="donut"; version="1.0.1"; sha256="17qiy9j0qm2q2gcysd5717bdl9nmkd7pd5z22pcj3icvxcpssval"; depends=[]; }; doremi = derive2 { name="doremi"; version="1.0.0"; sha256="005kp6f4jh8y1ykhri3mjnvc9w66b1a51bji574rkbxd1ans6mal"; depends=[data_table deSolve futile_logger ggplot2 gridExtra lme4 lmerTest zoo]; }; - dosearch = derive2 { name="dosearch"; version="1.0.6"; sha256="0ba3yrnysj29yrk9yah2xms56kg1qnkgajm74waixp8d3qazdfvg"; depends=[dagitty igraph Rcpp]; }; + dosearch = derive2 { name="dosearch"; version="1.0.8"; sha256="1jymk03snrfmr9da7h7l9823mzlcn6y4z6ay6nzi82n08d9xmp06"; depends=[Rcpp]; }; dosedesignR = derive2 { name="dosedesignR"; version="0.2.4"; sha256="0c8rilx4afih457f9gafgijm569g366lp4wms0vhc0f9kgr1z8h3"; depends=[DoseFinding DT ggplot2 lattice latticeExtra shiny shinyjs]; }; + doseminer = derive2 { name="doseminer"; version="0.1.2"; sha256="0y03k14adyqf0cyzqrr4rk47dabwgzzjkxbf11a5b8xlyy19mjr1"; depends=[magrittr stringr]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; dotCall64 = derive2 { name="dotCall64"; version="1.0-1"; sha256="1im5k8jbviwj2i42mq1kmjskh80isa7jr9w8i0fknidrzzy2h2zi"; depends=[]; }; dotdot = derive2 { name="dotdot"; version="0.1.0"; sha256="0d8inv2m7pkk6dnv9j9zai4lhghcg656l46d00rhp604rbhzlmw9"; depends=[]; }; dotenv = derive2 { name="dotenv"; version="1.0.3"; sha256="0dclwqg2hxdly8z3cckcskcll3dfax6g14h1xzjzdfwahhrbr5wb"; depends=[]; }; dotgen = derive2 { name="dotgen"; version="0.1.0"; sha256="12dvn52ggmkj2q6whi8s2hh9fpg7jcg20bgx32jxzh4cb1zxnksz"; depends=[mvtnorm]; }; - dotwhisker = derive2 { name="dotwhisker"; version="0.6.0"; sha256="19a7y7al2a082gyldfa4llxxymhhvbddmaflil2sv1zbcxn6yfg5"; depends=[broomExtra dplyr ggplot2 ggstance gtable margins purrr rlang stringr]; }; + dotwhisker = derive2 { name="dotwhisker"; version="0.7.4"; sha256="0awqdxb98vjafvjvx6fkmlyy6c2lp52la2b69964bawx5lgwj16b"; depends=[dplyr ggplot2 ggstance gtable margins parameters purrr rlang stringr]; }; doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; double_truncation = derive2 { name="double.truncation"; version="1.7"; sha256="0hrb1qli7i4jhc705rb02zbq2nyk0i406bb8gpy4jrzygjjbq3g0"; depends=[]; }; doubt = derive2 { name="doubt"; version="0.1.0"; sha256="16avp0f7ks2zd4ckakvfm57zng2jk0fg3fz6vbm05lzhqymh6y30"; depends=[unglue]; }; @@ -7896,12 +8218,13 @@ in with self; { downloadthis = derive2 { name="downloadthis"; version="0.2.1"; sha256="12df3cxg1x84f3sibllykd5wqs11mr4nlyv8hj8bh9d6wjvwj2li"; depends=[base64enc bsplus fs ggplot2 htmltools magrittr mime readr writexl zip]; }; downscaledl = derive2 { name="downscaledl"; version="1.0"; sha256="0lqxngzpxj65b48j5w0n8dg6fp4lgg5zpgxc2wj6d9wh5f97l71b"; depends=[dplyr keras magrittr raster Rcpp RcppArmadillo rgdal rstack sp tensorflow]; }; downsize = derive2 { name="downsize"; version="0.2.2"; sha256="18b9shd79z0bsdnp0apqqwv6c73j4wnfiv41ywqz761nmxbldxbn"; depends=[magrittr R_utils]; }; - dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; }; + dowser = derive2 { name="dowser"; version="0.1.0"; sha256="1k85m4xm1kkkzk19kxim83i3pbl22mz2lql4cw0ml7wmx0m1pva9"; depends=[alakazam ape Biostrings dplyr ggplot2 ggtree gridExtra markdown phangorn phylotate RColorBrewer rlang shazam stringr tidyr tidyselect]; }; dparser = derive2 { name="dparser"; version="1.3.1-4"; sha256="1rjbli5ii5l6cpj3ah6r7cyqzdw0fm2qmr4kkw8cv02zryw0y8za"; depends=[digest]; }; + dpcc = derive2 { name="dpcc"; version="1.0.0"; sha256="1f4c68bvkwg82k1zanjhqqika2bfjv83mbr2khl5lhvfjwvpi1m0"; depends=[Rcpp]; }; dpcid = derive2 { name="dpcid"; version="1.0"; sha256="1gx8gyrxvm07mjiasl0b80y0x3crq6gy170v6s817d11jw44n86z"; depends=[]; }; dplR = derive2 { name="dplR"; version="1.7.2"; sha256="1g57azixwv3c6x60l1kqdnzylf0ayv3s15wi0av2qcca35z3baa1"; depends=[digest lattice Matrix matrixStats plyr png R_utils signal stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; - dplyr = derive2 { name="dplyr"; version="1.0.5"; sha256="0w3fr6sn0mw5mjs27669czpc8vpjj6ayrjavw8v0gd7ccsfa0hbm"; depends=[ellipsis generics glue lifecycle magrittr R6 rlang tibble tidyselect vctrs]; }; + dplyr = derive2 { name="dplyr"; version="1.0.7"; sha256="0g8jsxclj9cgm7a2lyazy78sj62rbzw812lsw3fdsbz0pknkmznj"; depends=[ellipsis generics glue lifecycle magrittr pillar R6 rlang tibble tidyselect vctrs]; }; dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.4.1"; sha256="0ygn8cq4dnmzzxfskcir7g0bksgby5sw2j135gvrk599z3v6avg1"; depends=[bit64 DBI dbplyr dplyr odbc]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; @@ -7910,49 +8233,51 @@ in with self; { dpseg = derive2 { name="dpseg"; version="0.1.1"; sha256="19k7w6ln72qriwxdjx9a9cxpxbkqqja69r17zpwxz6qkw60ly4z9"; depends=[Rcpp]; }; dqrng = derive2 { name="dqrng"; version="0.3.0"; sha256="1fwsldqcri2lccna4icbmmlqic3w4xyjm7rn0xmikrsw4kzapvjb"; depends=[BH Rcpp sitmo]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; - dr4pl = derive2 { name="dr4pl"; version="1.1.11"; sha256="0vv3h4sxw38grhr70s28sxkca20adnqdmpp8qqwlbr3dw950yaa3"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; + dr4pl = derive2 { name="dr4pl"; version="2.0.0"; sha256="1nmy8mxxrmwzw826wvnn4rrm64xal9jr160yqiqj41zmb241q4b6"; depends=[generics ggplot2 glue Matrix Rdpack rlang tensor]; }; dracor = derive2 { name="dracor"; version="0.2.4"; sha256="0q7kwv60q32gj1b48r3ha0d539ddhw9jz3n62wvc8jr1na1v52lh"; depends=[Rcpp]; }; - dragon = derive2 { name="dragon"; version="1.1.0"; sha256="1cb5k0k4mimndy5xlfq813lg4acrl0lrv0q2hakll61lrqqxbykd"; depends=[broom colorspace colourpicker config cowplot curl dplyr DT future ggforce ggplot2 golem htmltools igraph lubridate magrittr openxlsx promises purrr RColorBrewer readr rlang rvest shiny shinydashboard shinyWidgets stringr tibble tidyr tidyselect visNetwork xml2]; }; + dragon = derive2 { name="dragon"; version="1.2.0"; sha256="0sgd5a6afnf6w3sqwhsz2c4dmc569m40ck6bssb27c0szkhq9jya"; depends=[broom colorspace colourpicker config cowplot curl dplyr DT future ggforce ggplot2 golem htmltools igraph lubridate magrittr openxlsx promises purrr RColorBrewer readr rlang rvest shiny shinydashboard shinyWidgets stringr tibble tidyr tidyselect visNetwork xml2]; }; dragonking = derive2 { name="dragonking"; version="0.1.0"; sha256="01b01wd1s2b8sa9f0kfbf2pbzhaqra7xxskigqh3vlj389xqm1id"; depends=[]; }; - dragracer = derive2 { name="dragracer"; version="0.1.5"; sha256="19qvr01wxzw5ihgpy7lz13f3hylnmprziwnr50gkwj6p3zhc0swa"; depends=[]; }; + dragracer = derive2 { name="dragracer"; version="0.1.6"; sha256="16sf5a22mqk42v3f8r54aqy4jl7jwzd4ijx7xv5lpg93vvinynqk"; depends=[]; }; dragulaR = derive2 { name="dragulaR"; version="0.3.1"; sha256="1cw5v7m1b4pxsizsjb3zdzhydxj577p6q5fcjklsvpzmiixzlyav"; depends=[htmlwidgets shiny shinyjs]; }; - drake = derive2 { name="drake"; version="7.13.2"; sha256="1whgk3a4miqqdw2n9q5wn4zjhfsz2j53h9nlggc4rz7ny2agf15x"; depends=[base64url digest igraph rlang storr tidyselect txtq vctrs]; }; - drat = derive2 { name="drat"; version="0.2.0"; sha256="0dz086jpk8znwbimpj0s01ycg2sbqp2gwnp6kz47cadjp3p89x2n"; depends=[]; }; + drake = derive2 { name="drake"; version="7.13.3"; sha256="0b167wj1r37rgfp3kq7y475920334ix52ckxcygyivb9y3zzdnmh"; depends=[base64url digest igraph rlang storr tidyselect txtq vctrs]; }; + drat = derive2 { name="drat"; version="0.2.1"; sha256="0his0lanwcl4k5c878qbih75khczldq1x0xwayv4jxbwa3jppa3x"; depends=[]; }; draw = derive2 { name="draw"; version="1.0.0"; sha256="0kbz8rcgygl4fhmljzaan5jl7wjvfljcaykm7q9lw9s6m78p06gz"; depends=[]; }; drawer = derive2 { name="drawer"; version="0.1.0"; sha256="1h8z852a8dwbqn3in4ycmkf1h7599z5zmfklw6538xfawhxf614w"; depends=[bsplus glue htmltools magrittr shiny stringr]; }; drawsample = derive2 { name="drawsample"; version="1.0.0"; sha256="0ygar9753vj2n4v19mf8qcqmrqnxs0czgy0bxbcszb4n5x6rmhq5"; depends=[dplyr lattice magrittr moments psych purrr readxl rlang shiny shinycssloaders shinydashboard tibble xlsx]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; + drda = derive2 { name="drda"; version="1.0.0"; sha256="117awm7sir4kcalxw17a1rm2wk2xn9whpsgnnjm5771g2fpbkan2"; depends=[]; }; + dreamer = derive2 { name="dreamer"; version="3.0.0"; sha256="05sa69mlm0i474hm03vwzy7iw2jqi539dlp5jh7y4q7clg2wqfym"; depends=[coda dplyr ggplot2 purrr rjags rlang rootSolve tidyr tidyselect]; }; dreamerr = derive2 { name="dreamerr"; version="1.2.3"; sha256="0g3gl4nzfw02alhyjw9flylfr2awyijjim50j1jdnp677zqlxkmf"; depends=[Formula]; }; drf = derive2 { name="drf"; version="1.1.0"; sha256="13b31rynknzirnvgygs1ar5968xdh8dhg60ibn0g359gnzadn7ad"; depends=[fastDummies Matrix Rcpp RcppEigen transport]; }; drfit = derive2 { name="drfit"; version="0.7.2"; sha256="03ahzmjzrkdrv36yj6vfg3g5bwn6lb7mlxmli68sixag5h83xq7f"; depends=[DBI drc MASS odbc qcc reshape2]; }; drgee = derive2 { name="drgee"; version="1.1.10"; sha256="0hy7887mvlxh73zk2yzp46bqakq924n940j21lw25jgygmzz1176"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; drhur = derive2 { name="drhur"; version="0.1.0"; sha256="1a13fpczvq0a93q2ldh2h42hk7firmcbr478vkli8y6d1bwlj567"; depends=[arm car dotwhisker gapminder ggeffects ggthemes gt interplot kableExtra knitr learnr likert modelsummary moments nnet ordinal performance scales summarytools tibble tidyverse]; }; drifter = derive2 { name="drifter"; version="0.2.1"; sha256="1xsp8cm02wd8zink0jqrdaii7s2dh0rw96rs6k8zr2g0341wmfba"; depends=[DALEX dplyr ingredients tidyr]; }; - drimmR = derive2 { name="drimmR"; version="1.0.0"; sha256="0782m6zy21hlvib9fw5gccx3dgswrhz15f35hgqx2prrvx2yqhi5"; depends=[Biostrings doParallel dplyr foreach future ggplot2 Rdpack reshape2 seqinr testthat tidyverse]; }; + drimmR = derive2 { name="drimmR"; version="1.0.1"; sha256="0fi0ifb9y2jfb347684fd9pjfgn4b693yb5sqbcfpf2z7jvknsi1"; depends=[doParallel dplyr foreach future ggplot2 Rdpack reshape2 seqinr tidyverse]; }; driveR = derive2 { name="driveR"; version="0.2.1"; sha256="1zc14j7aarxbw11p5gardqkwrab71b8wfrpd1q2g6r9dg98w146i"; depends=[caret GenomeInfoDb GenomicFeatures GenomicRanges org_Hs_eg_db randomForest rlang S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; }; drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; + droll = derive2 { name="droll"; version="0.1.0"; sha256="0gd1vnvkjdsw7gz4czi4g9zq5080awfr4dy2srgksh4ah4ki4vm3"; depends=[Ryacas]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; droptest = derive2 { name="droptest"; version="0.1.3"; sha256="1wlfhj6c4pb5mcybyd2bcn55y3azk7dv7d7il97qwbhl8kf59csl"; depends=[data_table]; }; - drord = derive2 { name="drord"; version="1.0.0"; sha256="1mkawx21dyj5vgiba598ilpas0vmi5qypi0aa9489yrsl40ls7xn"; depends=[ggplot2 MASS ordinal VGAM]; }; + drord = derive2 { name="drord"; version="1.0.1"; sha256="0xi85s6y78d54qv3cw7q72dz5kcs8cc8nyjyaxr5h6pfpzi2l8i9"; depends=[ggplot2 MASS ordinal VGAM]; }; drought = derive2 { name="drought"; version="1.0"; sha256="1rj3aycvkb0f85p12l356rlhid4zfzqkhks20x2hhwvpk8nhri8h"; depends=[copula]; }; - drtmle = derive2 { name="drtmle"; version="1.0.5"; sha256="1gnzprdjs4aws5q92a0dmlfzpwi3in3rsylbwr0r6cnghymgs69s"; depends=[doFuture future future_apply future_batchtools np SuperLearner]; }; + drtmle = derive2 { name="drtmle"; version="1.1.0"; sha256="08a6k0nrg6mqdslwjc71583x52vnax87nbfalk98zczwvrrdwvxa"; depends=[future_apply np SuperLearner]; }; drumr = derive2 { name="drumr"; version="0.1.0"; sha256="09xi3sf424bpq10fq25j209dylfbi1lfd911r44ffadkxzvp5p1s"; depends=[audio stringr]; }; ds = derive2 { name="ds"; version="4.0"; sha256="1iic5fb27cnhsa83zg28hydrhzc01i9z0711xvk95c3gv7mbfp2p"; depends=[]; }; - ds4psy = derive2 { name="ds4psy"; version="0.6.0"; sha256="0jcnxd8j4myn70kv1ifm1rjrfazjhb13gfy0hpgkxkzp244bfyfq"; depends=[ggplot2 unikn]; }; - dsa = derive2 { name="dsa"; version="0.74.18"; sha256="17pyr5jn6mjcch5cl22z8mg31anirmgdjs6k9vjmz5ar35fcb1vi"; depends=[dygraphs extrafont forecast ggplot2 gridExtra htmlwidgets R2HTML reshape2 rJava timeDate tsoutliers xtable xts zoo]; }; + ds4psy = derive2 { name="ds4psy"; version="0.7.0"; sha256="1dyylnx2lsdvsv9cydjp4qm1dgn4lv44afr2hplqyi45jmmzy8mm"; depends=[ggplot2 unikn]; }; + dsa = derive2 { name="dsa"; version="1.0.12"; sha256="16lqqm0lcgpkzkj7d0akamzap85aj4dyj5rs5fkb5b9bjqa5r4c5"; depends=[dygraphs forecast ggplot2 gridExtra htmlwidgets R2HTML reshape2 rJava seastests timeDate tsoutliers xts zoo]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; - dsb = derive2 { name="dsb"; version="0.1.0"; sha256="0zlzrcrg0gq6vsa5k1fgq8ryxqazgw7w363hb164wlml615z9lwy"; depends=[limma magrittr mclust]; }; + dsb = derive2 { name="dsb"; version="0.2.0"; sha256="10ybwid05rggascxrycpd36gwfgs07736sv0vzrgxndbamk66xis"; depends=[limma magrittr mclust]; }; dscore = derive2 { name="dscore"; version="1.4.0"; sha256="0vjrxdgss79pmd8vkarvgqqm465byz17r7r93k5i3923xm02kavr"; depends=[dplyr Rcpp RcppArmadillo stringr tidyr tidyselect]; }; dse = derive2 { name="dse"; version="2020.2-1"; sha256="170rxrniszs8h59ah4mn4mz8d7kzix4g3vlz4icd8w6bl40c6ykc"; depends=[setRNG tfplot tframe]; }; - dsims = derive2 { name="dsims"; version="0.1.1"; sha256="08a0hmwqwbm28pds3gib42n94algmi50833cp5mg4ihh5hjdi9kk"; depends=[Distance dssd ggplot2 gridExtra mgcv mrds rgeos rlang rstudioapi sf sp]; }; + dsims = derive2 { name="dsims"; version="0.2.0"; sha256="1yj6rk6wvxhwzfrbvy5ljsp94pfxrf9vwaccr9gbffg0b3c1badb"; depends=[Distance dssd ggplot2 gridExtra mgcv mrds rgeos rlang rstudioapi sf sp]; }; dslabs = derive2 { name="dslabs"; version="0.7.4"; sha256="05v51rckpfjz2cbms250sv0q34l0ip841w9ardvs51s2x7r8qypc"; depends=[ggplot2]; }; dslice = derive2 { name="dslice"; version="1.2.0"; sha256="1k9hxpmr563p8bpd9m991lx5ig366mzk9j1lzldci9pq4jiayin1"; depends=[ggplot2 Rcpp scales]; }; dsm = derive2 { name="dsm"; version="2.3.1"; sha256="0flmbypplk99n3b3lkai2lz162w4bnizw2bpdk91db53w2jfp3i9"; depends=[ggplot2 mgcv mrds nlme numDeriv plyr statmod]; }; dsmisc = derive2 { name="dsmisc"; version="0.3.3"; sha256="19760hcb5154rayhj72r48r7glh2qyaf178zkxplywmsw338kws4"; depends=[Rcpp stringr]; }; dsrTest = derive2 { name="dsrTest"; version="0.2.1"; sha256="1kljlfi7jf6fa8b5f3wxjsa9rlmzcp4qix3m2qyapz2lqd85mbb7"; depends=[asht exactci loglognorm]; }; - dssd = derive2 { name="dssd"; version="0.2.2"; sha256="07wf2q3vpapypc1hn7ryxyyhf7b9128blpyz2fgv72y1l64v2wpf"; depends=[plot3D rgdal sf]; }; + dssd = derive2 { name="dssd"; version="0.3.1"; sha256="0q98cn1hyaavzmc2kygpsab7vlzzmqwwc8avf3g1palmn9d4n8k2"; depends=[ggplot2 plot3D rgdal sf]; }; dst = derive2 { name="dst"; version="1.4.1"; sha256="1cz1fcyxpyv0ywmwlqdhgj3nzidnzcaxc1nkh8y5mph9wm612c25"; depends=[]; }; - dstack = derive2 { name="dstack"; version="0.2.1"; sha256="1xfrbz7bcmy5mpywjmn38lk3pmblad8wqic1jbvzn9pj2badn497"; depends=[base64enc bit64 httr rjson rlist uuid yaml]; }; dstat = derive2 { name="dstat"; version="1.0.4"; sha256="023jp0xdbg200ww1gnr3fzgjqd82acag0jps7q6j6m27q11psvgz"; depends=[]; }; dtangle = derive2 { name="dtangle"; version="2.0.9"; sha256="0yg1fbrqixqp93vdw3grvz1la5l2kidgs730qp6yihkp3260cxf3"; depends=[DEoptimR]; }; dti = derive2 { name="dti"; version="1.5.1"; sha256="08da7v7sl88g2jixfplvw9rc5rvlifq3fvyrgh9naa5jsmd8h5ia"; depends=[adimpro aws awsMethods gsl oro_dicom oro_nifti quadprog rgl]; }; @@ -7962,15 +8287,15 @@ in with self; { dtrSurv = derive2 { name="dtrSurv"; version="1.2"; sha256="104hz8nqn02rk2wg15j4qap7r7cq4162agjaflv2dxmyb9zj0cb2"; depends=[survival]; }; dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; - dttr2 = derive2 { name="dttr2"; version="0.3.0"; sha256="1irr0cpkls2fkck07az24yqc8llgw7q1nh7km0cm31dr4zxnj0hf"; depends=[chk hms lifecycle]; }; + dttr2 = derive2 { name="dttr2"; version="0.4.0"; sha256="1a7fmby2bassj3wnx2wk3c4fzzx63saw3963kfs6pq58cbwpqk09"; depends=[chk hms lifecycle]; }; dtw = derive2 { name="dtw"; version="1.22-3"; sha256="004gm4mzgdzdj807j3bwqsv5lizmnmz5jq514bdjshhkysnzjz6z"; depends=[proxy]; }; - dtwSat = derive2 { name="dtwSat"; version="0.2.6"; sha256="1mx3xxhf2ywi6cia47sn77wzxd8rg9wir7r8dx92k5dvawr425ki"; depends=[caret data_table dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer Rdpack reshape2 rgdal scales snow sp xtable zoo]; }; + dtwSat = derive2 { name="dtwSat"; version="0.2.7"; sha256="16crcvwj1s45gkg1gl6blll64wf4676qmzrx0kv55sylq0rjlxhf"; depends=[caret data_table dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer Rdpack reshape2 rgdal scales sp xtable zoo]; }; dtwclust = derive2 { name="dtwclust"; version="5.5.6"; sha256="05dszmj89id2hk9apxa7721737s6292w2l7vazj7aqwk1jyghjpm"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel RcppThread reshape2 RSpectra shiny shinyjs]; }; dual = derive2 { name="dual"; version="0.0.3"; sha256="1alxh9mj610m7wgr6a97mpzy5ia9vzckhz6wmxyix7xh9mzbn1gw"; depends=[]; }; dualtrees = derive2 { name="dualtrees"; version="0.1.4"; sha256="05mxwiwnv48jf6ya5qmfc7g2w8wkzhk56k9g0gr2m4cpfab7d5h2"; depends=[]; }; duawranglr = derive2 { name="duawranglr"; version="0.6.7"; sha256="0hxmvyl81xlp3vv1w7462cjfa9hdz5lki0p5pn0ik7dv5aap3wbq"; depends=[digest dplyr haven readr readxl]; }; dub = derive2 { name="dub"; version="0.2.0"; sha256="066lzyk44380mf17vx4db4a3a4rs7zl85mj5hjg172khjbqnbixw"; depends=[]; }; - duckdb = derive2 { name="duckdb"; version="0.2.5"; sha256="060rqmfm2aa6b0xiw0wsabl9hnmfdv4mxlgkawfh9nmw5nr57fhk"; depends=[DBI]; }; + duckdb = derive2 { name="duckdb"; version="0.2.9"; sha256="0l6nkld4qj0f6b4pcf4fzrdgnk41rxqwddws1wif3i8b0fg4b7an"; depends=[DBI]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; dumbbell = derive2 { name="dumbbell"; version="0.1"; sha256="0v0b4wbfskvcnzx10z9v4rf3mq8ccswz63pd6i1z7mggnwv38ps5"; depends=[data_table dplyr ggplot2 rlang rstatix tidyr tidyverse]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; @@ -7980,46 +8305,48 @@ in with self; { dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dupree = derive2 { name="dupree"; version="0.3.0"; sha256="0q8c0z1yhym20rhfjrc8n03gk458z0n8axx013rcwk1vc2zwk670"; depends=[dplyr lintr magrittr purrr rlang stringdist tibble]; }; durmod = derive2 { name="durmod"; version="1.1-4"; sha256="0d721sbxjfh00gpxd4hj8iq04awfd0pcd6bw8cv7kny21l2f3w44"; depends=[data_table mvtnorm nloptr numDeriv Rcpp]; }; - dvir = derive2 { name="dvir"; version="2.0.0"; sha256="0y0i0jmpx2v70swivr0sg2g4xanpnm0a7dyj3s0212x4lp4j1yx2"; depends=[forrel pedprobr pedtools]; }; + dvir = derive2 { name="dvir"; version="2.1.0"; sha256="0i02q6v7aasb7khnraqh1gljnfqwvv0jw3xyr2mc37rcn94qn62b"; depends=[forrel pedprobr pedtools]; }; dvmisc = derive2 { name="dvmisc"; version="1.1.4"; sha256="01v6sixx0f3nrn6ymfifb3pvd2msfrwm21kmdv38laxq29vc4rsi"; depends=[cubature data_table dplyr ggplot2 MASS mvtnorm pracma rbenchmark Rcpp survey tab]; }; dvqcc = derive2 { name="dvqcc"; version="0.1.0"; sha256="011mwdwh046wninfjdy00wxn312ykzn90nz9fz3l7c5cw9gzzfkg"; depends=[ggplot2 tsDyn]; }; - dwdradar = derive2 { name="dwdradar"; version="0.2.3"; sha256="01xk058d5sfgknyplg65xplkhqi79mn3p5p5fjrv4vis0mq0dsvq"; depends=[]; }; + dwdradar = derive2 { name="dwdradar"; version="0.2.7"; sha256="0y75gd9d7y2myp6filg2liv1r8rxwnffa9y9b2dq283m8kcwwai0"; depends=[]; }; dwlm = derive2 { name="dwlm"; version="0.1.0"; sha256="0n5dil9qvyy4gish3wnv8bzq0ci1p0dr2vmbbadl29jl7rd1v0rc"; depends=[]; }; dyads = derive2 { name="dyads"; version="1.1.4"; sha256="1k043cd3rqi89czmk0y5q9j54dhp0ndjj8jij9nww2gfqq1ydqx0"; depends=[CholWishart MASS mvtnorm RcppZiggurat Rfast]; }; - dycdtools = derive2 { name="dycdtools"; version="0.2.0"; sha256="16aiv0f6rsrpl8vym490w67had3isn9xbcyfiaa8vpgy8p80ymyr"; depends=[dplyr ggplot2 hydroGOF lubridate ncdf4 R_utils RColorBrewer tidyr]; }; + dycdtools = derive2 { name="dycdtools"; version="0.3.0"; sha256="1rp4nz81vj6wiy39rp5v86s3gnsyhcx20k6h3fwgjzl0r8p8yjcy"; depends=[dplyr ggplot2 hydroGOF lubridate ncdf4 R_utils RColorBrewer tidyr]; }; dydea = derive2 { name="dydea"; version="0.1.0"; sha256="15alr3f6wkkpjd5wmcjazi58yc8gwcqr662mjwlfg15r94fzqrlg"; depends=[Chaos01]; }; dygraphs = derive2 { name="dygraphs"; version="1.1.1.6"; sha256="022j007mzfa9k2n31yg4aizcsf571vv3jip092h23rqj03rk3ly3"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; dyn = derive2 { name="dyn"; version="0.2-9.6"; sha256="16fqv9k7yxdgybwzafjkyqm16qpgqz13lcjpi6a1nc8xbzlzh0gb"; depends=[zoo]; }; dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.6"; sha256="04026jz4vdyj2a2kry5kk5k84cy4vqqrcn328hxwnwh7r8i7klvn"; depends=[tcltk2]; }; dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; }; - dynRB = derive2 { name="dynRB"; version="0.15"; sha256="0fa6g4aj2cncg6mi0yc2yn6321qi7fz9d9cvqrnxhcnbbghdyzq9"; depends=[corrplot dplyr foreign ggplot2 RColorBrewer reshape2 vegan]; }; + dynRB = derive2 { name="dynRB"; version="0.16"; sha256="07hbfnzyzsg290l6w953v5yh2dbmqr9jb20gnxf8zn7dcggkl6sq"; depends=[corrplot dplyr foreign ggplot2 RColorBrewer reshape2 vegan]; }; dynaSpec = derive2 { name="dynaSpec"; version="1.0.1"; sha256="0wzfy50602wlsh4sbfjadsr01f3az2lvk5c4px3qmcvv5gybd6w0"; depends=[ari av gganimate ggplot2 magrittr NatureSounds pbapply png scales seewave tuneR viridis]; }; dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; }; dynamac = derive2 { name="dynamac"; version="0.1.11"; sha256="0dzw4h128z53vwdpkikhxqil0xjrcjrp1zmz0fy2qhq0n74sdyar"; depends=[lmtest MASS]; }; - dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; - dynamichazard = derive2 { name="dynamichazard"; version="0.6.8"; sha256="0wg4s78l52z85yzfmzl87zlzxnyir5x56jqhb9q133i26mlpid96"; depends=[boot Rcpp RcppArmadillo survival]; }; + dynamichazard = derive2 { name="dynamichazard"; version="1.0.0"; sha256="147w8gag69aizpzr3wwjypxidvsk29sn3pvhs872zzh3wrnnqi7r"; depends=[boot Rcpp RcppArmadillo survival]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; dyncomp = derive2 { name="dyncomp"; version="0.0.2-1"; sha256="13wp2k8nbgrbrqng2dmgy0ixgidk51wq9y7mv5pdbvdajxdsyh11"; depends=[zoo]; }; dyndimred = derive2 { name="dyndimred"; version="1.0.4"; sha256="1rj45bgms1x0zm1xjw2ylm45w9xnd68pmgb8dckzkszqg27d0fbh"; depends=[dynutils irlba lmds tibble]; }; dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; - dyngen = derive2 { name="dyngen"; version="1.0.1"; sha256="0cgq3f6x2q2m9gy6igaimk6kch7vjc3nqrp4xln0safqwbm3d6rc"; depends=[assertthat dplyr dynutils ggplot2 ggraph ggrepel GillespieSSA2 igraph lmds Matrix patchwork pbapply purrr rlang tibble tidygraph tidyr viridis]; }; + dynfeature = derive2 { name="dynfeature"; version="1.0.0"; sha256="0sxn4znmfa6z3j1jg457byq2c1mgnh8h5hskxiri3g0vg8nf7671"; depends=[dplyr dynutils dynwrap magrittr purrr ranger reshape2 testthat tibble tidyr]; }; + dyngen = derive2 { name="dyngen"; version="1.0.3"; sha256="18byx5v13fnc3mbbsxf7snk98hd5szgbinxljwhjjkl5hc5zz3cm"; depends=[assertthat dplyr dynutils ggplot2 ggraph ggrepel GillespieSSA2 igraph lmds Matrix patchwork pbapply purrr rlang tibble tidygraph tidyr viridis]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; dynlm = derive2 { name="dynlm"; version="0.3-6"; sha256="1g8qsb5m69yn35sm0shd97vbnbpqfkjkd7lbkwch1gpfxkld53zq"; depends=[car lmtest zoo]; }; dynmix = derive2 { name="dynmix"; version="1.0"; sha256="0rv787yn264dsp6hpyzwfrgc3p0rp2vhklkdszs9fwy3s4x5177w"; depends=[MASS Rcpp RcppArmadillo zoo]; }; dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; dynparam = derive2 { name="dynparam"; version="1.0.2"; sha256="12cclb8r13gn407197sw5gx2vfd0qc69mp16jam9chybxbj3pvx0"; depends=[assertthat carrier dplyr dynutils magrittr purrr stringr tibble tidyr]; }; + dynplot = derive2 { name="dynplot"; version="1.1.1"; sha256="107j4cpvdy52gywaiw1pyxrpx1j2ihr101hmqghsgihm9qkmabb4"; depends=[assertthat dplyr dyndimred dynfeature dynutils dynwrap GA ggforce ggplot2 ggraph ggrepel igraph MASS patchwork purrr reshape2 tibble tidygraph tidyr vipor]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; dynprog = derive2 { name="dynprog"; version="0.1.1"; sha256="11zsx2c4hv7k22pw85aa01zk4r0qpzwnf73ynylkfxfbi87rda9s"; depends=[rlang]; }; dynr = derive2 { name="dynr"; version="0.1.16-2"; sha256="0k9lvrxdwfjnwbln6lv2qhqr55xrxzkw8k6b2dx1dqz76a2qr2n7"; depends=[car deSolve fda ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 stringi tibble xtable]; }; dynsbm = derive2 { name="dynsbm"; version="0.7"; sha256="169yk539vynjbn89q6vs3l3fx7hk8n3i1msa4jws5vypgljc2rir"; depends=[RColorBrewer Rcpp riverplot]; }; - dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; + dynsim = derive2 { name="dynsim"; version="1.2.3"; sha256="1fk23cp2hvkn7msxrdc9cnm4pmcmhcdf3q6rwm507bniigrswnx4"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.4-2"; sha256="0gy9q7l7k37bxm3d37adpvqa45lvr048a309jqc052f179v38mlb"; depends=[BH data_table ggplot2 nleqslv splines2 survival]; }; - dynutils = derive2 { name="dynutils"; version="1.0.6"; sha256="0iqhwswla31gg3gz0gcnn8fwfb7yq0jj4brbximhbf3306h0dirx"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; + dynutils = derive2 { name="dynutils"; version="1.0.8"; sha256="1v8plqkxvdvkwzyj85xv09jm032iraab4pl7arbm2j8m1k1bq51y"; depends=[assertthat crayon desc dplyr magrittr Matrix proxyC purrr Rcpp remotes stringr tibble]; }; dynwrap = derive2 { name="dynwrap"; version="1.2.2"; sha256="0jsikx274nyjq4w286j4wqxrwyv6hvgx923clvdm6ygng1pn1cfr"; depends=[assertthat babelwhale crayon dplyr dynparam dynutils glue igraph magrittr Matrix processx purrr readr reshape2 stringr tibble tidyr yaml]; }; - e1071 = derive2 { name="e1071"; version="1.7-6"; sha256="0blfnv3m5k5xm9bfx1v5awvagqlhqaqpabrvzplf4244c3j259qa"; depends=[class proxy]; }; + e1071 = derive2 { name="e1071"; version="1.7-9"; sha256="09i2hmyf1bxansqp24p9n9djlzzarclqs173gjjv3fg0giga3ycv"; depends=[class proxy]; }; eAnalytics = derive2 { name="eAnalytics"; version="0.1.4"; sha256="15hhd4q2yxzq3a3awvk81ixa43hk519ym8ap7v1ahghyr0njnyyf"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard shinytest shinyWidgets]; }; eBsc = derive2 { name="eBsc"; version="4.13"; sha256="0n4v07462kxcsyjdy0cjbkn48ryzfnrvj28gxpsxwzn2sddfpl86"; depends=[Brobdingnag MASS Matrix nlme Rcpp RcppArmadillo]; }; + eCAR = derive2 { name="eCAR"; version="0.1.1"; sha256="01yfvvp4615vj6sdz751xkmvf5j22jk5fgrj6bhblr6xv0j25xc0"; depends=[Matrix]; }; eChem = derive2 { name="eChem"; version="1.0.0"; sha256="0wmf204hqd4s5har5l9bkcbrbmbqbb8m11w2aivi2gs98f3hy51p"; depends=[animation plot3D]; }; eDMA = derive2 { name="eDMA"; version="1.5-3"; sha256="0wyp81si6lcispqng4c7lii22qbyblvijgnlxvcsnkcxj5hpm76j"; depends=[Rcpp RcppArmadillo xts zoo]; }; eFRED = derive2 { name="eFRED"; version="0.1.0"; sha256="1sqhcwxbi2gxgznz0z3iyvllalq9qwm18bc60dr6y2wvcilagsiy"; depends=[httr jsonlite]; }; @@ -8033,12 +8360,12 @@ in with self; { eRm = derive2 { name="eRm"; version="1.0-2"; sha256="0smym010kswc5vx90qr3x1vl16xj1x1i54rvrj006dc4agc1vmlk"; depends=[colorspace lattice MASS Matrix psych]; }; eSDM = derive2 { name="eSDM"; version="0.3.7"; sha256="0rv5hhjsdkq0837822d52xfvfbj9qx1kjmqj8wyny335gv631205"; depends=[dplyr magrittr purrr rlang ROCR sf shiny units]; }; eadrm = derive2 { name="eadrm"; version="0.1.3"; sha256="0bb9glwqkzr1px03l4dxvgzm7zkrp3349l5fwfmw6jp0fxdl98ij"; depends=[]; }; - eaf = derive2 { name="eaf"; version="2.0"; sha256="0q8jjq2clp053zvja94ws635f0n6h5dlbdppzl4lj6dgc3vnvxsz"; depends=[modeltools Rdpack]; }; + eaf = derive2 { name="eaf"; version="2.1"; sha256="0pldzfgnn0zi3kd1psnp7z2n870373hmzzbaqg7nz9f39dg57b0b"; depends=[modeltools Rdpack]; }; earlyR = derive2 { name="earlyR"; version="0.0.5"; sha256="0978vv48sj1hs61rdb3xv02s8qz03jcm1c8q1mbb3d033x1q7k22"; depends=[distcrete EpiEstim epitrix ggplot2]; }; - earlygating = derive2 { name="earlygating"; version="1.0"; sha256="0y6xjkh9p8bvanc9p5sycah8v81k85xr8i7vyvjb9g4a64srwhd7"; depends=[betareg doParallel foreach]; }; + earlygating = derive2 { name="earlygating"; version="1.1"; sha256="0wwkn30kjdg0qni05l3acbgai9j3h2mqjli49afmpd2453fpyxig"; depends=[betareg doParallel foreach]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; - earth = derive2 { name="earth"; version="5.3.0"; sha256="0dr4w2jvvh3rh1zxissrhq55ba72gwir72kiz3fv6x0s4w3fib05"; depends=[Formula plotmo TeachingDemos]; }; - earthtide = derive2 { name="earthtide"; version="0.0.10"; sha256="09cd4vwkl33zgdwvhvi9jl6za9w61zjj9fyq3x2cxz4hgj346fbm"; depends=[BH R6 Rcpp RcppArmadillo RcppParallel]; }; + earth = derive2 { name="earth"; version="5.3.1"; sha256="00sbki2cpdj87i8f43qkswl1hza8z59wnn8xvv2qxsscjyx0dghb"; depends=[Formula plotmo TeachingDemos]; }; + earthtide = derive2 { name="earthtide"; version="0.0.11"; sha256="0bbj9b7hhz2xkm86zihwn7p4vg8pm8gkfb4r6j4z20kl9lv1ya0p"; depends=[BH R6 Rcpp RcppArmadillo RcppParallel]; }; earthtones = derive2 { name="earthtones"; version="0.1.1"; sha256="17biiw0ig8i8ihc2f8csp0bqryygg27ic2v1vrf81ax3qzhngy4l"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; easyCODA = derive2 { name="easyCODA"; version="0.34.3"; sha256="1s1zjjvswl3444m84n6c5sznva4y19kcm171xkcy1zdx3wqmd2m3"; depends=[ca ellipse vegan]; }; @@ -8047,7 +8374,7 @@ in with self; { easyPSID = derive2 { name="easyPSID"; version="0.1.1"; sha256="07m560j8bpzifik305ix33b26xg7w4xjn7lz9g9gp120cqs765dx"; depends=[foreign LaF stringr]; }; easyPubMed = derive2 { name="easyPubMed"; version="2.13"; sha256="1wd8idyqz7kgygp34mjp2abx82775ry8l07vsqdlqnc6fdnvg55d"; depends=[]; }; easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; }; - easySdcTable = derive2 { name="easySdcTable"; version="0.6.0"; sha256="0wkg0g9qn5rwmm66p2ba1sk9mclymm4p72239cs8yxsdakrwpw1m"; depends=[sdcTable shiny SSBtools]; }; + easySdcTable = derive2 { name="easySdcTable"; version="0.9.0"; sha256="1r73bpni6qqyhwvm3mlgp710m6sm3xwjxlj1kkgjxi3bj42dzv1d"; depends=[Matrix sdcTable shiny SSBtools]; }; easyVerification = derive2 { name="easyVerification"; version="0.4.4"; sha256="08mih1arx01vj7cs1jsln644pcvslpyw1rgr6jmv2czr6xd8qb7d"; depends=[pbapply Rcpp SpecsVerification]; }; easyalluvial = derive2 { name="easyalluvial"; version="0.3.0"; sha256="02l0jy3bwp3qrz6g5iknl2fsfqi6a6wzn8q18k8518xczlsn1gbd"; depends=[dplyr forcats ggalluvial ggplot2 ggridges gridExtra magrittr progress progressr purrr randomForest RColorBrewer recipes rlang stringr tibble tidyr]; }; easyanova = derive2 { name="easyanova"; version="7.0"; sha256="1zpwh3r1r0n11hgqzph8f2aac44qb6rpnhk73hcblq0f9vs0an55"; depends=[nlme]; }; @@ -8055,22 +8382,23 @@ in with self; { easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; - easyr = derive2 { name="easyr"; version="0.5-3"; sha256="19370zmw58alapxgp7cc5an9qh65m990jzr0x2j40cayy2w2xmkk"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang rprojroot stringr XML]; }; + easyr = derive2 { name="easyr"; version="0.5-4"; sha256="1d9yb9rix10l3n3ah6r532ahn26wdh2a6lby8ssv5azynlqd2l12"; depends=[data_table digest dplyr foreign glue Hmisc lubridate openssl readxl rlang rprojroot stringr XML]; }; easyreg = derive2 { name="easyreg"; version="4.0"; sha256="1w4wlhziyhdyldm0zgnm73fnxrh0fv8hwcw5j8ircxb4npx7bcgg"; depends=[nlme]; }; eat = derive2 { name="eat"; version="0.1.0"; sha256="0rm5fq24gara9lplpxz1g1xawxm9qvz4bpipqi21p0s6g5617s8a"; depends=[conflicted dplyr ggparty ggplot2 ggrepel knitr lpSolveAPI partykit Rdpack reshape2]; }; - eatATA = derive2 { name="eatATA"; version="0.11.2"; sha256="0y5dj9b7zv136lmp0pxlqgia0nav0xhpdlyk8ix7r0bkywhd70zq"; depends=[lpSolve Matrix Rglpk]; }; + eatATA = derive2 { name="eatATA"; version="1.0.0"; sha256="1n966jrcmifi1gbzcnyavsnzmcgsp138x32mcl8pj6w3by97i781"; depends=[lpSolve mathjaxr Matrix Rglpk]; }; eatDB = derive2 { name="eatDB"; version="0.4.1"; sha256="1p0dfdfa8409mdpr10ifj9vwskrypda9k02f7j6axcdnsfff6nha"; depends=[DBI RSQLite]; }; - eatGADS = derive2 { name="eatGADS"; version="0.16.0"; sha256="1w1l4raqy4ml5p40y24ji766z0dqam4jy5fhs43nflp6zgjzl3qn"; depends=[data_table eatDB eatTools haven hms plyr tibble]; }; - eatRep = derive2 { name="eatRep"; version="0.13.5"; sha256="183amgw1dzw4py091f7xwif9vh0ps0kpgvhkanadyx0pdga0ij30"; depends=[BIFIEsurvey boot car combinat eatGADS eatTools EffectLiteR estimatr fmsb Hmisc janitor lavaan lme4 mice miceadds msm plyr progress reshape2 survey tidyr]; }; - eatTools = derive2 { name="eatTools"; version="0.5.0"; sha256="0ks9prakgkc1jddiy5ck4k6633jr2ck9xdz98jpc29svscvzw6pb"; depends=[data_table]; }; + eatGADS = derive2 { name="eatGADS"; version="0.17.0"; sha256="1gkjggmr5mddx4qbrbjpwpxdhivr7wg17i6pg8nsxw258a699g7d"; depends=[data_table eatDB eatTools haven hms plyr tibble]; }; + eatRep = derive2 { name="eatRep"; version="0.13.6"; sha256="0k3r46bzxhb5a423d4vp2c4wy4gmh2p80qnm5h2hs928l5q1b7hn"; depends=[BIFIEsurvey boot car combinat eatGADS eatTools EffectLiteR estimatr fmsb Hmisc janitor lavaan lme4 mice miceadds msm plyr progress reshape2 survey tidyr]; }; + eatTools = derive2 { name="eatTools"; version="0.7.0"; sha256="1rhf6c6j7qwz5y20dip07h4044581pf9kaq71rl8sswbcsb7nny5"; depends=[data_table]; }; ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; eba = derive2 { name="eba"; version="1.10-0"; sha256="03jr54xq109x9bf8kcs8mi7am17l9ya3xdkdppd8imwd2paqrssk"; depends=[nlme psychotools]; }; ebal = derive2 { name="ebal"; version="0.1-6"; sha256="1cpinmbrgxxv0fzi9qi2inv4hw2lz7iq4b0ggp316rdqqb5bj9r0"; depends=[]; }; + ebci = derive2 { name="ebci"; version="1.0.0"; sha256="00fa2y4ha9nlbjd01qckrrn721s63ja61n5jr4wm7ac6y7xivb2i"; depends=[]; }; ebdbNet = derive2 { name="ebdbNet"; version="1.2.5"; sha256="0kal4sqx12y04696ilwnwkmss4rn16dkbnalgqimz6i4jhz8n23h"; depends=[igraph]; }; - ebirdst = derive2 { name="ebirdst"; version="0.2.2"; sha256="1bgh7vhwl6jcybaa05j6gdh4z17r17n500wx1za1q5lfww6v6mny"; depends=[car data_table dplyr ggplot2 gridExtra magrittr PresenceAbsence rappdirs raster rlang sf stringr tidyr viridisLite xml2]; }; + ebirdst = derive2 { name="ebirdst"; version="0.3.2"; sha256="04z3l08fnwh77hgcydm8aschv31499al3ljn5sinx527my1m28v1"; depends=[DBI dplyr fasterize gbm ggplot2 gridExtra jsonlite magrittr mgcv PresenceAbsence rappdirs raster rgdal rlang RSQLite sf stringr tidyr viridisLite xml2]; }; ebmstate = derive2 { name="ebmstate"; version="0.1.2"; sha256="0x7mklp8209xi0lglh9ggjm7crvvx83arryap319lwjll2d8p89s"; depends=[HDInterval mstate Rcpp survival]; }; - ebreg = derive2 { name="ebreg"; version="0.1.2"; sha256="1azs6dh2c7qacmql9kyssxp3gdk7i3fyaq9k8jnagzlmmkzmxddf"; depends=[lars Rdpack]; }; + ebreg = derive2 { name="ebreg"; version="0.1.3"; sha256="1xrs9afjd5hkdmhglj3md5i5hm7awlcdlccz3y2lw4c73lx31ywz"; depends=[lars Rdpack]; }; ec50estimator = derive2 { name="ec50estimator"; version="0.1.0"; sha256="1zg4p1734q2jzifzfi2lf9wz3687s3cdn0yzkiwbc6w49mgdw877"; depends=[dplyr drc magrittr tibble tidyr]; }; ecap = derive2 { name="ecap"; version="0.1.2"; sha256="0d260y4phh1a7zlj2lgvdf7xd2z14l9djv7nrwa84pwqqyijc7rl"; depends=[ggplot2 quadprog]; }; ecb = derive2 { name="ecb"; version="0.4.0"; sha256="0hn1d1hxilwxxmxzzpdcj81d4vy8fbjk1z09kw7j0b2p04wrdlkc"; depends=[curl httr rsdmx xml2]; }; @@ -8079,33 +8407,38 @@ in with self; { ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; ecespa = derive2 { name="ecespa"; version="1.1-13"; sha256="0a8s923xzw6wkl9240mqsr7lpvjmi20kqn2zsbax3rrrdf4gqfkx"; depends=[spatstat spatstat_core spatstat_geom]; }; ech = derive2 { name="ech"; version="0.1.1.2"; sha256="1mw68dkm6n6zj27rmyw33gaha1nly1srr6v1d5iib72b1gwnik8l"; depends=[assertthat curl dplyr fs geouy glue haven janitor labelled laeken purrr readxl rlang srvyr statar stringr survey tidyr]; }; - echarts4r = derive2 { name="echarts4r"; version="0.4.0"; sha256="0v93q0r5l5vzwfylq5n0wkzjaqgm5xiyw13rcrlvkbcx5zwjsgcb"; depends=[broom corrplot countrycode dplyr htmltools htmlwidgets jsonlite magrittr purrr rstudioapi scales shiny]; }; - echarty = derive2 { name="echarty"; version="0.1.3"; sha256="0imc7s0mdwf5sjqszq5fk2jqbrv7nypqd740f3d7y7qsp8hdbhcx"; depends=[crosstalk dplyr htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; + echarts4r = derive2 { name="echarts4r"; version="0.4.1"; sha256="161cw7sqgysgj9cb8zqardzmh62kajpd2sdfrh7cwm5qik16mml3"; depends=[broom corrplot countrycode dplyr htmltools htmlwidgets jsonlite purrr rstudioapi scales shiny]; }; + echarty = derive2 { name="echarty"; version="0.3.1"; sha256="1fqa77g5mvxwv24gd4fvcy5d3m5i5dcfs9qlwgky2hzsp9y8wh75"; depends=[dplyr htmltools htmlwidgets jsonlite magrittr]; }; echelon = derive2 { name="echelon"; version="0.1.0"; sha256="0dw15igx8jwgfr1f7p5pspxjiqhqmfp7shdhq8g07f4bj76irzm4"; depends=[]; }; echo_find = derive2 { name="echo.find"; version="4.0.1"; sha256="1nadqqpxgx2ck16nzjp5ajm6714452qzllg5cq1jpisv1yb31db2"; depends=[boot minpack_lm]; }; echogram = derive2 { name="echogram"; version="0.1.2"; sha256="0kir7x32fk3fc63kr3b2j0hfkmivs2pwrlxyjvdg7xqc59hjp3ma"; depends=[geosphere readHAC]; }; - echor = derive2 { name="echor"; version="0.1.5"; sha256="0knvvrpw5icyb02jrj8jhlj8ql1j145gxg6wagb458j7kjchqnan"; depends=[dplyr geojsonsf httr plyr purrr readr rlang tibble tidyr]; }; + echor = derive2 { name="echor"; version="0.1.6"; sha256="1jkpwcx60l7nq5k6kr7qlp6qwbi2jn80asvfyhy459ikdk2s2lcy"; depends=[dplyr geojsonsf httr plyr purrr readr rlang tibble tidyr]; }; ecipex = derive2 { name="ecipex"; version="1.1"; sha256="16iyi6n0pnyfmy47b0ranjbh3spvq8cgkmcamzhgjfj7qn0ix184"; depends=[CHNOSZ]; }; eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; - ecm = derive2 { name="ecm"; version="6.1.0"; sha256="1ngz92ysi5vdm7wh9ahzd4b5rhs84pb92figd75v5ywfy2ya6jbb"; depends=[car earth lmtest sandwich urca]; }; + ecm = derive2 { name="ecm"; version="6.3.0"; sha256="1g8y8wks7asjyybdh4nf19w5v8kvl56n69dl0sd0mlir98i4jmr3"; depends=[car earth lmtest sandwich urca]; }; ecmwfr = derive2 { name="ecmwfr"; version="1.3.0"; sha256="0xwbcgd590vk4civa4s039avvvxsazzh9y05lw591mpm79lz19mj"; depends=[curl getPass httr keyring memoise]; }; ecoCopula = derive2 { name="ecoCopula"; version="1.0.1"; sha256="18gkib3m4p7vi9jgzyrnznl9kcjizlh77icqrv8xjpi40ksw9m2r"; depends=[betareg doParallel foreach glasso glm2 igraph MASS mgcv mvabund ordinal plyr sna tweedie]; }; - ecochange = derive2 { name="ecochange"; version="1.3"; sha256="16dpp887nv7afpvcgmpli0iv4jaz060vj0w63asfz04ix95jmcnl"; depends=[curl dplyr forcats gdalUtils getPass ggplot2 httr landscapemetrics lattice R_utils raster rasterVis readr rgdal rgeos rlang rvest sf sp tibble viridis xml2]; }; + ecochange = derive2 { name="ecochange"; version="2.2"; sha256="0mcd6b148xmwyycjqn0aapfahk63idp5lp2q3vjqdjb8qq55gjss"; depends=[curl data_table dplyr forcats gdalUtilities gdalUtils getPass ggplot2 httr landscapemetrics lattice R_utils raster rasterDT readr rgdal rgeos rlang rvest sf sp tibble viridis xml2]; }; + ecocomDP = derive2 { name="ecocomDP"; version="1.1.0"; sha256="07szcjv31kp3ddlbv8azgbxqbzlx2qpn3amaizmkzs4z1z5f77wa"; depends=[data_table dplyr EML emld geosphere ggplot2 httr lubridate magrittr neonUtilities RColorBrewer rlang rmarkdown stringr tidyr uuid xml2]; }; ecodist = derive2 { name="ecodist"; version="2.0.7"; sha256="1dkf2m6glry5wzwfjiyw6sac89v6g0frbagr9cyfp2hcp0y5g4n2"; depends=[]; }; ecolMod = derive2 { name="ecolMod"; version="1.2.6"; sha256="1n30faldfhpm2jkaw793vr220kgn3bmn8hxhw32rax294krmwn4v"; depends=[deSolve diagram rootSolve shape]; }; ecolTest = derive2 { name="ecolTest"; version="0.0.1"; sha256="0gkhf8gdjvkys54x0qx0h5i0lz0ksba6xdy15wzblzhym43vh9wf"; depends=[]; }; ecolottery = derive2 { name="ecolottery"; version="1.0.0"; sha256="0w5aq1aaqzz74vlj8hgnmn60l8rdrchx022dpspqnpvpzdlh65z5"; depends=[abc ggplot2]; }; - econet = derive2 { name="econet"; version="0.1.93"; sha256="1irabvbmi5lr7h1plfyq9wpdp0vsdbbgvglx4hk6jzrmk6ll9jjd"; depends=[bbmle doParallel dplyr foreach formula_tools igraph intergraph MASS Matrix minpack_lm plyr progressr sna spatstat_utils]; }; + econet = derive2 { name="econet"; version="0.1.94"; sha256="1a3c8f76mr6027015s6lczxz4m20dl0bw1a23lv6i327nkk2lvmm"; depends=[bbmle doParallel dplyr foreach formula_tools igraph intergraph MASS Matrix minpack_lm plyr progressr sna spatstat_utils]; }; econetwork = derive2 { name="econetwork"; version="0.5.1"; sha256="1q092y2bq410ln98vwgmy6s09zpyj1pj35wz8i1y1by7kc9k775q"; depends=[bipartite blockmodels igraph Matrix_utils Rcpp RcppEigen RcppGSL rdiversity]; }; economiccomplexity = derive2 { name="economiccomplexity"; version="1.1"; sha256="0ms5jr3d0hgch4di26wcaxrbl7q6iq2k53m2xwk0lxv6s1p373mp"; depends=[igraph Matrix Rdpack]; }; + econullnetr = derive2 { name="econullnetr"; version="0.2.1"; sha256="0kdzkk8mlnc71a6n80hgrclwns66zyhr183ad4ifz8b146xh5cl9"; depends=[bipartite gtools reshape2]; }; + ecopower = derive2 { name="ecopower"; version="0.1.0"; sha256="0x9rvwiypc3as44w67fn7dfsw1rrdhfpirz069hmzbw35gw0g1qh"; depends=[ecoCopula mvabund]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.3"; sha256="1bhh4bnvrvgz49wim5r0b4awfsn9l23wvl4kl0vny0s4hm7cgahc"; depends=[]; }; ecorest = derive2 { name="ecorest"; version="1.0.0"; sha256="13x95z99yqld1fvfgzbm6ahrnvfvcqwlb23yjr187yg83iynh79v"; depends=[viridis]; }; - ecosim = derive2 { name="ecosim"; version="1.3-2"; sha256="1ivfd8c1gh685gqy22cxi42vh54r6zya27jihpb9na7mfrc0nwqn"; depends=[deSolve stoichcalc]; }; + ecosim = derive2 { name="ecosim"; version="1.3-3"; sha256="190xf0xy1cw40qx8x6y4m9avspxh0y11ffl3s18d5d2zr7rj3ag2"; depends=[deSolve stoichcalc]; }; ecospace = derive2 { name="ecospace"; version="1.4.2"; sha256="0vfaf27bv687ypxg5apzv63rl495rxyflqw33j17i4h0s7cjkgrm"; depends=[FD]; }; ecospat = derive2 { name="ecospat"; version="3.2"; sha256="1w937f56q8lgjyqc575vxy3vfhd53ri9yiw300qqx6mnj66ijsl8"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators ks maps maptools matrixStats nabor poibin PresenceAbsence randomForest raster rms snowfall sp vegan]; }; ecostats = derive2 { name="ecostats"; version="0.1.4"; sha256="0xkhkcc6psgvvwhys9azhxisnqw0azd7brp0rg60d725jqvwhbyp"; depends=[GET mgcv mvtnorm]; }; + ecostatscale = derive2 { name="ecostatscale"; version="1.0"; sha256="14i5wg5qxqn3qzycgqda6blb0imkckq23gl3c3whfa72a3a8y30q"; depends=[deSolve mvtnorm]; }; ecotox = derive2 { name="ecotox"; version="1.4.2"; sha256="0i4wjarg8gj4hfr0d4fqk74ymhkzrq3vkklpv5v1511ci19hpv16"; depends=[tibble]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; + ecotraj = derive2 { name="ecotraj"; version="0.0.1"; sha256="0570j338107bxx004wwx76j1x981nh1apgp9x33r4ddz4f589aag"; depends=[circular Kendall MASS Rcpp]; }; ecoval = derive2 { name="ecoval"; version="1.2.7"; sha256="1hnryk9y3074iy7hv40jr00lpg2w99l7halwv6bj14v6ygddj2k7"; depends=[jpeg rivernet utility]; }; ecp = derive2 { name="ecp"; version="3.1.3"; sha256="0n602jssl6rf596nwm6hbl7s9vdlqi20w8mrhxicj373mw5v22m8"; depends=[Rcpp]; }; ecpc = derive2 { name="ecpc"; version="2.0"; sha256="0xw9yd2xsxkia68zvm2pkqm73y3k9gzhnkslwikq39ra1l404r28"; depends=[CVXR gglasso glmnet Matrix multiridge mvtnorm pROC survival]; }; @@ -8114,8 +8447,8 @@ in with self; { ed50 = derive2 { name="ed50"; version="0.1.1"; sha256="058p1750ba5hp4rczi26grgwjia2ny1880v1vfp6wxad13r459pq"; depends=[boot]; }; ed50simulation = derive2 { name="ed50simulation"; version="0.1.1"; sha256="00fknpssrpin8bpjhf2lsjx3lbpinrmqa6jzmgy3nslkc51x0939"; depends=[boot]; }; eda4treeR = derive2 { name="eda4treeR"; version="0.3.0"; sha256="1shhajd9m9cxj9hdz34bnbs6sx20si37wh6ljw0wx5yrc9m7z9ib"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; }; - edbuildmapr = derive2 { name="edbuildmapr"; version="0.2.0"; sha256="1jyw6rgvyjzfqd75k2mn4c5z5gwgbyiiy02l4pagq0mkcbbg55zh"; depends=[dplyr magrittr sf spdep stringr tidyselect tmap]; }; - edbuildr = derive2 { name="edbuildr"; version="0.2.1"; sha256="1zzifxfkxrvs7nq7rzd84kfslqiqyjyj592mbsbzm2wdafbvkiqj"; depends=[dplyr magrittr openxlsx scales stringr tidyselect]; }; + edbuildmapr = derive2 { name="edbuildmapr"; version="0.3.1"; sha256="0hc5vfpilqxva88dzgp57j9cgsq64r75vhm3hhl8lhi2wwapwk1d"; depends=[dplyr magrittr sf spdep stringr tibble tidyselect tmap]; }; + edbuildr = derive2 { name="edbuildr"; version="0.3.0"; sha256="19fsk8qkxyzncn614fy6hmmxpv1dikqghs101hbzd0g0a511xk8f"; depends=[dplyr magrittr openxlsx scales stringr tidyselect]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; edci = derive2 { name="edci"; version="1.1-3"; sha256="1f1ry2adfranfrrvf1gkiy58pra3z6bray4v5fgr0z9n1ybcaff0"; depends=[]; }; eddi = derive2 { name="eddi"; version="0.0.1"; sha256="19cgrqdcji509igb6rmlwb75xyyvrh34nv6zyjjfcsc31p5nvf95"; depends=[raster rgdal]; }; @@ -8125,19 +8458,22 @@ in with self; { edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; edfReader = derive2 { name="edfReader"; version="1.2.1"; sha256="076far4fhd6rpa6fwffad4cgchjvar135yblvlrm33s9pd5bf0hn"; depends=[]; }; edfun = derive2 { name="edfun"; version="0.2.0"; sha256="1wxx6bgy03z7c1d6556bbjl1cb49n2vn734fw2d5c1jk0zsh3fmz"; depends=[]; }; - edgar = derive2 { name="edgar"; version="2.0.3"; sha256="129q32bnpcx0l2ffnids87692hc7nbg4hw3r117aamp835i12gri"; depends=[qdapRegex R_utils stringi stringr tm XML]; }; + edgar = derive2 { name="edgar"; version="2.0.4"; sha256="0l4pkiyf0b5q4ldr0iw3ix1aq1xjrz5p6bkxmwxlgwcnrlhjlm2w"; depends=[qdapRegex R_utils stringi stringr tm XML]; }; edgarWebR = derive2 { name="edgarWebR"; version="1.1.0"; sha256="1v9rdj2qdcvzz7g78pa9j6l8d6zjz1q06h09c4547r67bzfz1nxy"; depends=[httr jsonlite xml2]; }; edgeCorr = derive2 { name="edgeCorr"; version="1.0"; sha256="19n67yc58ksin7xydrnfsyyw7fqawm5xli67cz4lv4wb62w6r6ld"; depends=[]; }; edgeRun = derive2 { name="edgeRun"; version="1.0.9"; sha256="0d5nc8fwlm61dbi00dwszj1zqlij4gfds3w1mpcqnnfilr2g3di1"; depends=[data_table edgeR]; }; + edgebundle = derive2 { name="edgebundle"; version="0.2.1"; sha256="167b2qm6bhxsx94njrk256yvmrf3frcmbydcw9fzrhms7yz1nrmz"; depends=[igraph interp Rcpp reticulate]; }; edgebundleR = derive2 { name="edgebundleR"; version="0.1.4"; sha256="0pajr95qqppk2m4l7rfi46rll32z8a7lmq0vmb3p8n0aks5ajn1n"; depends=[htmlwidgets igraph rjson shiny]; }; edgedata = derive2 { name="edgedata"; version="0.2.0"; sha256="11sc7x0m00yhn2c4601dpjv3brmf57i8barsl3p7bawcvka8z5lr"; depends=[]; }; edina = derive2 { name="edina"; version="0.1.1"; sha256="1lpmidyxi54byrsnwwadkh5rr454635xrwa4v2wz8mqr2hngxis3"; depends=[ggplot2 jjb Rcpp RcppArmadillo reshape2 rgen]; }; editData = derive2 { name="editData"; version="0.1.8"; sha256="170i8p264zj716h58bb6pvgh2lnz1w5vplnrcv8vizppi0n1js6l"; depends=[dplyr DT magrittr miniUI openxlsx rio rstudioapi shiny shinyWidgets tibble]; }; editrules = derive2 { name="editrules"; version="2.9.3"; sha256="07j8wj0fk34irqgsz70h2wad3wdjv5xl1cl702vxbr0nvmpw2ngl"; depends=[igraph lpSolveAPI]; }; - edl = derive2 { name="edl"; version="1.0"; sha256="0hl12y6pjdwvx7rxmxz1p07ggmh20q9n8c9vkd6fhy7panlvw6rn"; depends=[data_table plotfunctions]; }; - edmdata = derive2 { name="edmdata"; version="1.1.0"; sha256="10ik5q2jw86b8fcskid5qpn7anfvfbrksh01rvb66mrds87lv7wl"; depends=[]; }; + edl = derive2 { name="edl"; version="1.1"; sha256="19p0qr9lm0kdinh4qnqx7bzxkbvcfpp6mbddwh0hgsgqkbw916cp"; depends=[data_table plotfunctions]; }; + edmcr = derive2 { name="edmcr"; version="0.2.0"; sha256="06ms8zyygkgq3divall8paiiw5blqxfgml8iy339zfyiwfxabw5a"; depends=[igraph lbfgs MASS Matrix nloptr sdpt3r truncnorm vegan]; }; + edmdata = derive2 { name="edmdata"; version="1.2.0"; sha256="042imrnn242jzb9wb4ghjganqmx61zjwspqy9qpkxqi9nr7zxr75"; depends=[]; }; edrGraphicalTools = derive2 { name="edrGraphicalTools"; version="2.2"; sha256="105jv2sz10xbl881lkhgmxzgmb8629mqsminhd197khrkf9nv40i"; depends=[lasso2 MASS mvtnorm rgl]; }; edstan = derive2 { name="edstan"; version="1.0.6"; sha256="1gm1rxwywigyfdlcm2yj1m9qjb4s6w7chr1ck7b32x1pdxdl3ns5"; depends=[ggplot2 rstan]; }; + educationdata = derive2 { name="educationdata"; version="0.1.1"; sha256="1mliw2lc4517g7yqnd7lkys0wwx2va5f4mlwnqadpn7rg6hgm04x"; depends=[glue httr jsonlite readr]; }; educineq = derive2 { name="educineq"; version="0.1.0"; sha256="0qd6kvcy280glv3q6lcrawmnsfvp90as95chgi3hav0yj2dpakn6"; depends=[flexsurv ineq]; }; edwards97 = derive2 { name="edwards97"; version="0.1.0"; sha256="1ybksvrp7pd78ncmzdn67q9w3baxx6kf886214cqa5yfbi8jsc4z"; depends=[broom cli glue rlang tibble withr]; }; eechidna = derive2 { name="eechidna"; version="1.4.1"; sha256="1p8vj371i7zglw7898akzj4hd5j7zk35is91jylxalldjab88v9c"; depends=[colourpicker dplyr ggplot2 ggthemes magrittr plotly purrr rgdal rgeos shiny sp stringi tibble tidyr tidyselect]; }; @@ -8150,24 +8486,27 @@ in with self; { eeptools = derive2 { name="eeptools"; version="1.2.4"; sha256="048gz26dqgfsnxhp4r99j7p4s4d5pxsjci5zw8wjvv35lizij573"; depends=[arm data_table ggplot2 maptools vcd]; }; eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; ef = derive2 { name="ef"; version="1.2.0"; sha256="1ic26mwjv221yyjj16v9xcdxsg3pl6wsp82iaprihdcndswccvzi"; depends=[dplyr Matrix mgcv RcppEigen TMB]; }; + efdm = derive2 { name="efdm"; version="0.1.0"; sha256="0qvlgp4am5al8bf6wz2sa597mxz1hp6q22lp7xpsn5470gphlnvl"; depends=[data_table]; }; + eff2 = derive2 { name="eff2"; version="1.0.0"; sha256="01w31w19bpdq9mswjlx1rgxb0s2dcxqgb69ja5glnd4mmfkkxshd"; depends=[igraph pcalg RBGL]; }; effectR = derive2 { name="effectR"; version="1.0.2"; sha256="1icr1sx98x3h8rbky1agdh809arhjqcypyajl7y50yis8a5pkycb"; depends=[ggplot2 reshape2 rmarkdown seqinr shiny viridis]; }; effects = derive2 { name="effects"; version="4.2-0"; sha256="0iks79rd4knrd81x4kvcpgpclr69l0m0v6sfla8k3wzkcnydycv8"; depends=[carData colorspace estimability insight lattice lme4 nnet survey]; }; - effectsize = derive2 { name="effectsize"; version="0.4.4-1"; sha256="02rwf3lxnzgc8yh0wridsc6lqr9s6v0cqzbk4biwnr494rvs46zb"; depends=[bayestestR insight parameters]; }; + effectsize = derive2 { name="effectsize"; version="0.4.5"; sha256="0rp0r75p8q467lmrsr1gl9wjpib9jz7ksx5rm6c7q2lfg9b9zrjf"; depends=[bayestestR insight parameters]; }; effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.8.1"; sha256="1m5ch2g77f4ldbxhzp2ls1pga8hq7ggkz1xs8a90h0s09rj0gd7w"; depends=[]; }; - eflm = derive2 { name="eflm"; version="0.1"; sha256="1hx51xnsjqv4mfqfv46mcd669fy3sc029x70w9r180v7misqgwww"; depends=[vctrs zoo]; }; + eflm = derive2 { name="eflm"; version="0.3.0"; sha256="0pl1z0yy257x4yhy2m7w6xkicr2a5b37rdsrf7a5ramk7z2nvs4m"; depends=[tibble]; }; efreadr = derive2 { name="efreadr"; version="0.2.2"; sha256="1h27by1m451wrnw017005avs5yj3fjzrm2lq5153aqm1mbbxxwvs"; depends=[dplyr ensurer magrittr readr]; }; efts = derive2 { name="efts"; version="0.9-0"; sha256="1cdn37sij3q73z9gal6x3nnnds55whfj5ywyww119hx092xcb2h4"; depends=[lubridate magrittr ncdf4 plyr stringr udunits2 xts]; }; ega = derive2 { name="ega"; version="2.0.0"; sha256="04kwh24aap22yclmcrix3vi553qb30hd43mgfzpdl0cw3ibrh7xg"; depends=[ggplot2 mgcv]; }; egcm = derive2 { name="egcm"; version="1.0.12"; sha256="0nssf5six1j7z6fss7478zdbsfx60myzw833m7nsnaf1r8n4ixaf"; depends=[ggplot2 MASS pracma quantmod tseries urca xts zoo]; }; egg = derive2 { name="egg"; version="0.4.5"; sha256="1fy7srpiavfn8kyrr1m84an7acgwi6ydzrg71m3b0vk7y9ybmj0m"; depends=[ggplot2 gridExtra gtable]; }; eggCounts = derive2 { name="eggCounts"; version="2.3"; sha256="0y74dd8s406yz6nhwlb09hgarw90a68wji2vykxpqcrfll814g7q"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders]; }; - egor = derive2 { name="egor"; version="0.21.02"; sha256="18ygbc0zybd444skvhzf4vcc0zblz8jhbxmv2ik3m4cafhmy03gz"; depends=[dplyr purrr rlang srvyr tibble tidygraph tidyr]; }; + egor = derive2 { name="egor"; version="1.21.7"; sha256="0vjswxwgkm0rfblm5ds0ngh1iz67qnkylsaqldj8q37qx9d51n0l"; depends=[dplyr purrr rlang srvyr tibble tidygraph tidyr]; }; eha = derive2 { name="eha"; version="2.9.0"; sha256="069nxf7mfx2b2r1961jf0mcgxbc132ljykr17p3k8pax39m2p78n"; depends=[survival]; }; ehaGoF = derive2 { name="ehaGoF"; version="0.1.1"; sha256="15hpzj3ridl6w3pd5z86d88cc88jw09qpqhsdwkar4dby8lgxhi0"; depends=[]; }; ehelp = derive2 { name="ehelp"; version="1.2"; sha256="0264nx4bidrbwhlxx9llarvh4zb3xnzln8km14823q1hclkpm2fq"; depends=[]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; + ei_Datasets = derive2 { name="ei.Datasets"; version="0.0.1-1"; sha256="1c78rbqgbvsg6zqc6bw0dvjwp9llkmpp9id0q1h7i3dn81yl7xy9"; depends=[tibble]; }; eiCompare = derive2 { name="eiCompare"; version="3.0.0"; sha256="0cpllc4aq52mga2cc8ms1q4qf633r13i5j6267vnvqyb6zq0r47y"; depends=[bayestestR censusxy coda data_table doParallel dplyr ei eiPack foreach ggplot2 leaflet magrittr mcmcse overlapping purrr rlang sf stringr tidyr tidyselect wru]; }; eiPack = derive2 { name="eiPack"; version="0.2-1"; sha256="0xcgl9pr6d960zhp8fd944ba5p5ybp520lp2a4jgsj1lcvqf8xbn"; depends=[coda MASS msm]; }; eia = derive2 { name="eia"; version="0.3.7"; sha256="1af9m5qrchxcrhyasx0hkrzjr6z4vixxmq4q9q33bkscy263q9fg"; depends=[dplyr httr jsonlite lubridate magrittr memoise purrr readxl tibble]; }; @@ -8178,8 +8517,9 @@ in with self; { eikosograms = derive2 { name="eikosograms"; version="0.1.1"; sha256="13s5wqcc8iwnhn3msrh9dfrvq9bwlby93p9v5wcnrm8m9iskax1s"; depends=[plyr]; }; eimpute = derive2 { name="eimpute"; version="0.1.1"; sha256="1ipm6v4irk4d4qxld09h8r0kknjmbikvn27y68wq7r02qhcvj4nv"; depends=[Rcpp RcppEigen]; }; einet = derive2 { name="einet"; version="0.1.0"; sha256="02v4k6031q2bcjkhbypzkgdj1lyvqbsi1nb0y40zb26bk2381ycq"; depends=[assertthat entropy igraph magrittr shiny]; }; - eiopaR = derive2 { name="eiopaR"; version="0.1.0"; sha256="0vyidwmvva7sr1vwxdgq3lsq7lrwpxxh23yiqpg5w5l31nj8151j"; depends=[httr jsonlite]; }; - eirm = derive2 { name="eirm"; version="0.3"; sha256="02x2cl8zrngj8ram4m8s501jbpa6120r2b3kwzswp3i82lrdr46m"; depends=[lme4 magrittr optimx readxl reshape2 shiny shinycssloaders shinydashboard]; }; + einsum = derive2 { name="einsum"; version="0.1.0"; sha256="01930c38hkbqhn8d5g7jfhr0mrdi077rg0kkbp5kagxcqx6jrg7w"; depends=[glue mathjaxr Rcpp]; }; + eiopaR = derive2 { name="eiopaR"; version="0.1.1"; sha256="1f8fm6ia5invskc7a7hcjvf52afdkw38y1vx7jlpqxvawswmwpv2"; depends=[curl httr jsonlite]; }; + eirm = derive2 { name="eirm"; version="0.4"; sha256="0gnjrkivkpbbfj6c51706w3nmxrzz8l0pphdb0ig2a32pr8m3s2b"; depends=[ggeffects ggplot2 lme4 magrittr optimx readxl reshape2 shiny shinycssloaders shinydashboard]; }; eive = derive2 { name="eive"; version="2.3"; sha256="073hwx944db7zxq6yib6yvciaic11k49zl1iqphippcd5ygkad80"; depends=[Rcpp]; }; eivtools = derive2 { name="eivtools"; version="0.1-8"; sha256="0ynmrql6dv10m7cwba5mzwlbvp6ab53nzqqvk3ihwyiqzmnnmpk4"; depends=[R2jags]; }; eixport = derive2 { name="eixport"; version="0.5.0"; sha256="1k5p9v5jmw5cs31sn69fjdfhh5yyzk85828aljsmsyx1ycibnwmg"; depends=[cptcity data_table ncdf4 raster sf sp]; }; @@ -8189,7 +8529,6 @@ in with self; { elastic = derive2 { name="elastic"; version="1.2.0"; sha256="0k98ziacyxl1pyhyynmswcncqwl0a05sawypncdpdd9xr77nvgi6"; depends=[crul curl jsonlite R6]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; elasticnet = derive2 { name="elasticnet"; version="1.3"; sha256="0nxcw06d0cp2mbqzg2fm9yys5xm6xx7bfcfvr0avcs8afkvz29j8"; depends=[lars]; }; - elasticsearchr = derive2 { name="elasticsearchr"; version="0.3.1"; sha256="0v79kb0w33n7l64ipkq0bd7kp5hmj6cvxf5rflqjd412lnf669q8"; depends=[dplyr httr jsonlite]; }; elec = derive2 { name="elec"; version="0.1.2.1"; sha256="1gk75y83n6hvv36fp1n6kncln35j6f3ahasnzhc4fp71aq6q6vjf"; depends=[]; }; elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; elect = derive2 { name="elect"; version="1.2"; sha256="1hjqhmdklspssa75x8xdhv2narqgw80qh259hyfwfgnvva97w2ja"; depends=[msm nnet]; }; @@ -8198,10 +8537,11 @@ in with self; { electivity = derive2 { name="electivity"; version="1.0.2"; sha256="0clxsn9zkpdlq9jgq029ag310ji0hd0l23wfyqh8gkkj0091ip5a"; depends=[]; }; electoral = derive2 { name="electoral"; version="0.1.2"; sha256="1kf5ix0bmrh7zwgg87zf10s8pvq32fpqlmyw2dq1kf9gv3s91p04"; depends=[dplyr ineq tibble]; }; elementR = derive2 { name="elementR"; version="1.3.7"; sha256="01xbqargzc0bp1l5rcvxikr95ghj9w7w5byhrjbgwbia6y7zhxa2"; depends=[abind colourpicker devtools EnvStats gdata gnumeric httpuv lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; - elevatr = derive2 { name="elevatr"; version="0.3.4"; sha256="0ik4kvfyl9zxklwzpzbbvrcn4i7v9jckn00gl2fhzs2bfgpn7pbf"; depends=[httr jsonlite progress raster sf sp]; }; + elevatr = derive2 { name="elevatr"; version="0.4.1"; sha256="07y4jza4v5aqvf9k8lvh5cqapvyyfdhs9hfd0msncisv7jlz6lwf"; depends=[furrr future httr jsonlite progressr purrr raster sf sp units]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; elfDistr = derive2 { name="elfDistr"; version="1.0.0"; sha256="11h91mwiw2pr0c8zvyzqql275falpiajv784n2rd5xs9azprqdd0"; depends=[Rcpp]; }; elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; }; + elisr = derive2 { name="elisr"; version="0.1.1"; sha256="1kz07fyffaqgda9rqidxzxz0bxzhyb8pyxpzqsvjsn1i9w98cb5k"; depends=[]; }; elitism = derive2 { name="elitism"; version="1.0.4"; sha256="0n5g1nd1dd5wc76qa2va1lyxahg9p062l8wdqzq43ah6943pjzgr"; depends=[MASS]; }; elliplot = derive2 { name="elliplot"; version="1.2.0"; sha256="186i4gr8k9bifzssblln8z6wxfmnplls3kc4m2liiz86mzsnim9r"; depends=[]; }; ellipse = derive2 { name="ellipse"; version="0.4.2"; sha256="1wm5v7zdv2drgdba7z96jwsx74mqhlq80qgrvdb4vb5r02dcw68p"; depends=[]; }; @@ -8213,30 +8553,31 @@ in with self; { elsa = derive2 { name="elsa"; version="1.1-28"; sha256="01sj2a4yhv5m6qj6ih26zw4yzd8s27lll7yp0yysjjrwz79a0fbq"; depends=[raster sp]; }; eltr = derive2 { name="eltr"; version="0.1.0"; sha256="0f4sy2hhsbghasl5xcnqlgxqhb503pl73c5vdkgpcm73smrqbpbv"; depends=[data_table]; }; emIRT = derive2 { name="emIRT"; version="0.0.11"; sha256="1h91q9vi9cv14bmkaakyynw2z9sx51w0c2kw2in0x91wx7scmd0p"; depends=[pscl Rcpp RcppArmadillo]; }; - emayili = derive2 { name="emayili"; version="0.4.10"; sha256="0v0jv1r1smp278fdyx0a35ah68q9xc8r9wprnv1nxxbfy5p2f1s1"; depends=[base64enc curl glue httr magrittr mime purrr stringi]; }; + emayili = derive2 { name="emayili"; version="0.5.0"; sha256="116fmfkcspxb87l5r7cgr6k7m92xmyi0qf4fvpji0r1s6k3a99cx"; depends=[base64enc commonmark curl digest dplyr glue httr logger magrittr mime purrr rlang rmarkdown stringr tibble tidyr urltools vctrs xfun xml2]; }; emba = derive2 { name="emba"; version="0.1.8"; sha256="1bzp1cplr977w87bm0pvabvgai91a3j51pfjn4lc1ncjbr2v6wl0"; depends=[Ckmeans_1d_dp dplyr igraph purrr readr rje stringr tibble tidyr tidyselect usefun visNetwork]; }; embed = derive2 { name="embed"; version="0.1.4"; sha256="13vz3px2vvzr56kynqc6vcy7swzq9v021g66dliychqyx7r9q49l"; depends=[dplyr generics keras purrr recipes rlang rsample tensorflow tibble tidyr uwot withr]; }; - embryogrowth = derive2 { name="embryogrowth"; version="8.0"; sha256="0nz4zw3qr9a93cq1aliqa7m01xll8qg00m7rqgy85j905wmv8i1c"; depends=[deSolve HelpersMG numDeriv optimx]; }; + embryogrowth = derive2 { name="embryogrowth"; version="8.2"; sha256="1dq3vz70ai63mfmhfs9mavmx3kqsbdy2m7pfv74lk3gj42rzdbvx"; depends=[deSolve HelpersMG numDeriv optimx]; }; emdbook = derive2 { name="emdbook"; version="1.3.12"; sha256="0ls3zxxlwmdv7zn1v9i1y9zc2sn0hbgmyjvsj7zn3ajsw7wwlih6"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="2.0.2"; sha256="14f9v83n6nvryvnbkh9h1bf1rarqwqsypf9md7k304ilhjhcp16p"; depends=[boot formula_tools ggplot2 gridExtra HLMdiag MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 saeRobust spdep]; }; + emdi = derive2 { name="emdi"; version="2.1.0"; sha256="0a3rz0x06838l7ylpkk55vfxaxfh5hkab102vshsl8yzzsmxn72k"; depends=[boot formula_tools ggplot2 gridExtra HLMdiag MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 saeRobust spdep stringr]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.9"; sha256="04sm05xnjns7wcvpk35ywkxy6g0mm84r060mkmzh64wq58c2q06l"; depends=[moments]; }; emhawkes = derive2 { name="emhawkes"; version="0.9.5"; sha256="0b6kjwx2lsz5rj8819n71nvvchjpys90ns5n6gcgfwn5afzfdvql"; depends=[maxLik]; }; emld = derive2 { name="emld"; version="0.5.1"; sha256="0cvnfvzskvpcqzs6fwrpjcqrc6yrfciliy9jj0c9h4iyag0g0b9b"; depends=[jsonld jsonlite xml2 yaml]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.6.0"; sha256="07iw3faprf98mncymbjbmfm2yi294yiwdg30xlql5sfx12qbf6r0"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.6.3"; sha256="1mwcq3hvpx04qnn5k0bv1mikjgm9mk6m83i8hj350s1c1a0mi40n"; depends=[estimability mvtnorm numDeriv plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0.1"; sha256="0rkr4d4fyqxmsrlbzar27z97qkw4cl1dkvfnhbdwpgg9fi1cixmz"; depends=[]; }; + emoji = derive2 { name="emoji"; version="0.2.0"; sha256="06bsz0hsaqa2lzqpyqhsfp07p8ri5frvhiza0s8aali7w3cr2szh"; depends=[glue stringr tibble]; }; emojifont = derive2 { name="emojifont"; version="0.5.5"; sha256="1hhrwilv36hd9gs1kcl2zsi6519md0h9aixjrm6lfclxvz8r6k1i"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; emov = derive2 { name="emov"; version="0.1.1"; sha256="04w0bjyxvfb4ky573byp7j9b7x4gqycr5pgpnsl6rzag00zsf45a"; depends=[]; }; empichar = derive2 { name="empichar"; version="1.0.0"; sha256="1hcl6wbf4saxxp54j2w67csv6nzfgc3f3wdd9lk9grmkxsaab4rx"; depends=[Rcpp RcppArmadillo]; }; empiricalFDR_DESeq2 = derive2 { name="empiricalFDR.DESeq2"; version="1.0.3"; sha256="0h2mcdw4v3ac6dn0s4z37l4sdzbi12sxrnn0f0gc9z207dyyf6w3"; depends=[DESeq2 GenomicRanges]; }; emplik = derive2 { name="emplik"; version="1.1-1"; sha256="1kw8g8j075bsicdvgkjf4870rfv5c30gvmw6qkkaz3ki22x74w77"; depends=[quantreg]; }; - emplik2 = derive2 { name="emplik2"; version="1.21"; sha256="1980bwc4fc4rwzlwya030n5rv8rq0s82hnw955mvaxrbmicnqlla"; depends=[]; }; + emplik2 = derive2 { name="emplik2"; version="1.30"; sha256="0shi483jzydy4hpgplbnsxy3dpbxjmbs4n778xc4qjmvbni4d857"; depends=[]; }; ems = derive2 { name="ems"; version="1.3.10"; sha256="16ixfwl4q8wkny44kk7qqjcywjj6dscz0a9vx38fi4jks72mhgrd"; depends=[boot rms survival]; }; emstreeR = derive2 { name="emstreeR"; version="2.2.2"; sha256="0lchkkn6s265xnk25bprijlc6nl62nwcp0l9nwplyw7q492ysg0q"; depends=[BBmisc BH ggplot2 Rcpp RcppArmadillo RcppMLPACK scatterplot3d]; }; - emuR = derive2 { name="emuR"; version="2.2.0"; sha256="0yvlvbzpmaq60gh9mn1gf07bpdanjxwc50ck4zlw36n9vq6jvjp6"; depends=[base64enc DBI dplyr httpuv httr jsonlite mime purrr readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid V8 wrassp]; }; + emuR = derive2 { name="emuR"; version="2.3.0"; sha256="1i133lnjn5yjy26r25xfhny6410lp8jj23jpn54znbyc560w2c9r"; depends=[base64enc cli DBI dplyr httpuv httr jsonlite mime purrr readr rlang RSQLite rstudioapi shiny stringr tibble tidyr uuid V8 wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-21"; sha256="0iikf6yinkqcgdnxx6v5kzfllhq3ppl75ym48vlcbnvkwv0v4l4v"; depends=[mvtnorm]; }; enRich = derive2 { name="enRich"; version="3.1"; sha256="0xl9rhz6mflzp1g5d51xz74dsm8qp16jbkflhzrha3vfirn2jh8q"; depends=[]; }; enc = derive2 { name="enc"; version="0.2.2"; sha256="16x8cckw0ah2yfczvv4j1jy4f8m23fkac38fz068964sv4l8z645"; depends=[]; }; @@ -8244,40 +8585,38 @@ in with self; { encryptedRmd = derive2 { name="encryptedRmd"; version="0.2.1"; sha256="0agd5lqrmdi50r9fl25njwsvg91nqsvj4h6c639vfhxx7p9y9nfk"; depends=[readr rmarkdown sodium]; }; encryptr = derive2 { name="encryptr"; version="0.1.3"; sha256="01gsimhrb9c7k5d9h5dbvm4h9i7fc9vzi8wgqb5f191ki27fsw9w"; depends=[dplyr knitr openssl purrr readr rlang]; }; endoSwitch = derive2 { name="endoSwitch"; version="1.0.0"; sha256="1cj4skk317ppnayk1ph63vll49vs74fljc25cn1iviwgjq64ly0k"; depends=[data_table maxLik msm]; }; - endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; }; endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.1"; sha256="067wrb5vhi9qn66rwp38cb4kss2yc55blh5dnl99fsvpc0qs146p"; depends=[coda]; }; endtoend = derive2 { name="endtoend"; version="2.29"; sha256="0dqzh2blb2h8ngchvfvnzx0gmilvx9ydvzqwfy4d9f58ixybn4d9"; depends=[ggplot2 pastecs]; }; energy = derive2 { name="energy"; version="1.7-8"; sha256="12a7gy681aq3l55iys044cs6sn1s2l5qihghpdl01cvv0ggfh26y"; depends=[boot gsl Rcpp]; }; energyr = derive2 { name="energyr"; version="0.1.2"; sha256="0gjw2cvpvhyywxlx3vfkhlh7zjwig46z1zwdc01zxwflvdx3z40n"; depends=[RgoogleMaps]; }; - enerscape = derive2 { name="enerscape"; version="0.1.0"; sha256="0bdxs7r2s2m10584mdwfifh5cl62fq7pw5bi8n2xg51x25x3kpdv"; depends=[gdistance Matrix raster rgdal sp]; }; + enerscape = derive2 { name="enerscape"; version="0.1.2"; sha256="18jf8bm1c2ivb8vaqalj9xgs7rc0lgl0v4zdmd841p2vh3lkjlz6"; depends=[gdistance Matrix raster rgdal rgeos sp]; }; enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; }; - english = derive2 { name="english"; version="1.2-5"; sha256="0d6rin40wy2y6k75x8d5qvf03rfy139f309wrl8xwbdb1h8fjkd1"; depends=[]; }; + english = derive2 { name="english"; version="1.2-6"; sha256="1g3nmy5p8wj3ix1vp1qmkmy3dyqisrw0md8cjrx4klqkp0wqlms9"; depends=[]; }; engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; - ennet = derive2 { name="ennet"; version="0.2.1"; sha256="022nc413pz4nw0wrlffpia4w4nazma8ns2kbvj5vyz33hy13hcdz"; depends=[dplyr lubridate magrittr rvest stringr tibble tidyr xml2]; }; enpls = derive2 { name="enpls"; version="6.1"; sha256="12088v9xnj5b3dlakqz1hbzxz4mdai7xi7s2fpx8lj3y3lx7znmb"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="3.0"; sha256="0i3kfq4fkmx47n61zj5f87iv8ci6gbgy90a7s8dy9zbndzvbgya3"; depends=[ggplot2 httr rjson]; }; enrichwith = derive2 { name="enrichwith"; version="0.3.1"; sha256="05fhx323ani86wdxbjp8dgw4d1iq4kr1887646w072a6iq93bwhm"; depends=[]; }; ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.2"; sha256="16d8030zfdwifqrh45vz3gf5n0bix0mhsmsnydgjq1fghdklcmyx"; depends=[chron ensembleBMA evd]; }; ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; - ensembleTax = derive2 { name="ensembleTax"; version="1.0.2"; sha256="1vp8vmxx70g30fis9kxfzhmbpikcl3q1qv991n1msj642ch19phj"; depends=[Biostrings DECIPHER dplyr stringr usethis]; }; + ensembleTax = derive2 { name="ensembleTax"; version="1.1.1"; sha256="1kxkv8b6qgrbylp16hlh53h3sr079jqhypv1fk4g5fr349zrjgv3"; depends=[Biostrings DECIPHER dplyr ggplot2 reshape2 stringr usethis]; }; ensemblepp = derive2 { name="ensemblepp"; version="1.0-0"; sha256="08k7v61p2sgr07dklabl0g7apsn9da60sfb14gfrwipwi8bsd4pv"; depends=[]; }; ensr = derive2 { name="ensr"; version="0.1.0"; sha256="18b81iswvby7k5akbfdyc6a8j1621d4d35hxmgjip5kyvf5cb3p8"; depends=[data_table ggplot2 glmnet]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; entcn = derive2 { name="entcn"; version="0.1.0"; sha256="0wpa1293d1bdlx8pikzfh4vqhw7p45bi140aj3x4m8p21h5b4gd6"; depends=[bitops RCurl rjson RYoudaoTranslate stringr]; }; - entropart = derive2 { name="entropart"; version="1.6-7"; sha256="1liglcw45v6ywydi5664kxfb3z4s85ajdhbpbws7wy1x9wjdgaff"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES tibble vegan]; }; + entropart = derive2 { name="entropart"; version="1.6-8"; sha256="1z6v7gszlmjppp9q69k0awjdkjp0xj2b57g1m52klhcvrf8cp8ad"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES tibble vegan]; }; entropy = derive2 { name="entropy"; version="1.3.0"; sha256="0fhhsy8ci9c73xwr2b167dfix0b7kqsk6kf46qqv1lmvbv11vxqa"; depends=[]; }; entrymodels = derive2 { name="entrymodels"; version="0.2.1"; sha256="0fz7jzax12pzw47iry4amgg9z4z3z94kig6r5dhcqa84kq02294v"; depends=[dplyr magrittr readr]; }; envDocument = derive2 { name="envDocument"; version="2.4.1"; sha256="074m7adnasvys28kjdgj9071fi90vsl4yv5zvpxik4crlx098dlw"; depends=[]; }; envalysis = derive2 { name="envalysis"; version="0.5.1"; sha256="1lvzb8jdbvrigw5va39fsfnkvwrgb9wvarrdllipszqxmnc8g5rk"; depends=[drc ggplot2 lmtest]; }; enveomics_R = derive2 { name="enveomics.R"; version="1.8.0"; sha256="00akdhqs7jabk7g33rwmxs92jcr39shy9s456nqxk6x4244d2vb3"; depends=[fitdistrplus investr sn]; }; - envi = derive2 { name="envi"; version="0.1.8"; sha256="16nd0mqshjcxhnf88jr61aapqfy8riap80awimwapgcf9ssc04x6"; depends=[concaveman cvAUC doFuture doRNG fields foreach future iterators maptools pls raster rgeos ROCR sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; + envi = derive2 { name="envi"; version="0.1.10"; sha256="0wpdykcg3c8zph6jg70l864dx98x78d6v3s9d2y54zvk104hhq4q"; depends=[concaveman cvAUC doFuture doRNG fields foreach future iterators maptools pls raster rgeos ROCR sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.6.6"; sha256="01y3qqh99aclarglpdg8mb9iikzkm1w62mv93m22lm8ami25a372"; depends=[animation BiocParallel data_table mixtools RColorBrewer Rdisop]; }; enviPat = derive2 { name="enviPat"; version="2.4"; sha256="1gvb7jmwwh4l44b50xmrq3bysr2iv6442yh9pdk6n81g3bgpz1d0"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; - envir = derive2 { name="envir"; version="0.2.0"; sha256="0257j77r2bxsznfgq813xpsjixan29iyc4is5b074xxaznv3fvmp"; depends=[]; }; - envirem = derive2 { name="envirem"; version="2.2"; sha256="061p76w76hhs201p3l4wvbfbrcd9h8bigkn5xpsz5pmvhd2hrdkn"; depends=[knitr palinsol raster RSAGA sf]; }; + envir = derive2 { name="envir"; version="0.2.1"; sha256="1w4yrs1k3makjwvaqr7611944lw0rl61y34xv5pqvgv4ymfnga93"; depends=[]; }; + envirem = derive2 { name="envirem"; version="2.3"; sha256="0gffdj7jz61dlkznlk5a4w8fh72phfj3s9gnssb1z73jx82j34cw"; depends=[knitr palinsol raster RSAGA sf]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; envnames = derive2 { name="envnames"; version="0.4.1"; sha256="1fkbid2x60m63dnrxrdq7im49spn8m70g1gd8nqjq3xlv642ianm"; depends=[]; }; envoutliers = derive2 { name="envoutliers"; version="1.1.0"; sha256="1wgrrkkpkmf300qb56mq6nxigwnpq551sjxlk05lk3ckawx66srf"; depends=[car changepoint ecp ismev lokern MASS robustbase]; }; @@ -8288,14 +8627,15 @@ in with self; { epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.5.1"; sha256="0ksb1cmjykmp0diic7xz5240d9n0sl6byp8rac3jpk3hb1p46r4d"; depends=[]; }; epanetReader = derive2 { name="epanetReader"; version="0.7.3"; sha256="05pwa6z03qsjwr9pxpbxycsd21p7mf5j5ajyg4yaas5g100s1k8c"; depends=[]; }; epca = derive2 { name="epca"; version="1.0.0"; sha256="1jzknymbsxvgrsiwnibhy9y5nlhsz4dyx22zpxs1493map5v8442"; depends=[clue GPArotation imager irlba matlab Matrix RSpectra tidyverse]; }; + epcc = derive2 { name="epcc"; version="1.4.7"; sha256="0j4cb17gvwsaacmhvm8qp5chr384kl7gj6089gjrc2hqi6kjr0rx"; depends=[cowplot deSolve formattable ggplot2 httr nls2 proto raster readxl rgdal rlang sp]; }; eph = derive2 { name="eph"; version="0.4.0"; sha256="0yznfhsp6sgymq02m4g477pnqlmmbdvwv32sidaa2giaf3nr4izj"; depends=[assertthat attempt curl dplyr expss glue htmltools janitor leaflet magrittr purrr questionr readr readxl rlang rvest stringr tibble tidyr tidyverse xml2 zoo]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; epiGWAS = derive2 { name="epiGWAS"; version="1.0.2"; sha256="0jqblfmz02za3b2pgi15379bzgh98yv5kyv8kh0lkzhrmpgph2zj"; depends=[DescTools glmnet matrixStats SNPknock]; }; - epiR = derive2 { name="epiR"; version="2.0.19"; sha256="0q2vmj1fznanvbckf3hsrszwvhyxbjjpk7m5rkyfv1jbdwbgny1h"; depends=[BiasedUrn lubridate pander survival]; }; + epiR = derive2 { name="epiR"; version="2.0.35"; sha256="0x3525rmvk7pbazz72z1z8qf2gc41zdhnbi2a82yhfbflavl2mx8"; depends=[BiasedUrn lubridate pander survival]; }; epibasix = derive2 { name="epibasix"; version="1.5"; sha256="0ivr51x37cbdryli9b4p4iq9v2c90zwmywrwdmg7ryq5vprvvbp0"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.4.0"; sha256="0v3s1vrf2iqh03rkkwrlz6mhpbsbjxkayrqdx04vrnja4i9ljshk"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr tinytest xml2]; }; - epifitter = derive2 { name="epifitter"; version="0.2.0"; sha256="158llnpbqrmgg238ax1ciyfa30rq4mxyjyg61gs82d0d36rhb93i"; depends=[DescTools deSolve dplyr ggplot2 knitr magrittr minpack_lm tibble tidyr]; }; + epifitter = derive2 { name="epifitter"; version="0.3.0"; sha256="104hl3b3951psi023hv95486ygcv9ilmqkzw96yygym7rhkaww9m"; depends=[DescTools deSolve dplyr ggplot2 knitr magrittr minpack_lm tibble tidyr]; }; epiflows = derive2 { name="epiflows"; version="0.2.0"; sha256="09ri1p73ih0i08irc06ff169hi5vcl8bdi63b056kzxgmv17yqkp"; depends=[epicontacts geosphere ggmap ggplot2 htmltools htmlwidgets leaflet sp tibble visNetwork]; }; epigraphdb = derive2 { name="epigraphdb"; version="0.2.2"; sha256="1kd46anhijcx4sw4ghzd417vwdl64375cbrlj0shcvv9gcc3h38n"; depends=[glue httr jsonlite magrittr purrr tibble]; }; epikit = derive2 { name="epikit"; version="0.1.2"; sha256="0b9kc7qr7nkafmak60pyj7hln19w4zp33pk5y48qmfsxgarl6pv3"; depends=[binom dplyr forcats glue rlang scales tibble tidyr tidyselect]; }; @@ -8304,51 +8644,52 @@ in with self; { epinetr = derive2 { name="epinetr"; version="0.94"; sha256="1bd9qfs7q4d199lqiny16ck0y2ji4p2nkx7ds5dafpk5pqa314fc"; depends=[GA ggplot2 igraph Rcpp RcppAlgos reshape2 vcfR]; }; epiphy = derive2 { name="epiphy"; version="0.3.4"; sha256="04wsppjycnrzrml3zxrpr0xdxxas3hj8rskiivx5vfmfjpwipq4r"; depends=[ggplot2 msm pbapply Rcpp transport]; }; episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; - episensr = derive2 { name="episensr"; version="1.0.0"; sha256="0w06dm26dgmq423jgx7m2786pf07kli0fh8jyknii7qm4jgqiqhm"; depends=[actuar boot dagitty ggdag ggplot2 magrittr trapezoid triangle]; }; + episensr = derive2 { name="episensr"; version="1.1.0"; sha256="0670h2x8mcd4g7m17k0zascq5yb3llsvpp9qwzghiha0f9ai8xw0"; depends=[actuar boot dagitty ggdag ggplot2 magrittr trapezoid triangle]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.2"; sha256="0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc"; depends=[kableExtra knitr MASS survival xml2]; }; epitools = derive2 { name="epitools"; version="0.5-10.1"; sha256="0jqn3pas4lsans50jwakmvpyc7m7x0kxq6dzyckd3vgww56qa65l"; depends=[]; }; epitrix = derive2 { name="epitrix"; version="0.2.2"; sha256="1rqpvdky002h6mz636b77l4kd0im16pww62l6vnwh83si1m9pkki"; depends=[distcrete sodium stringi]; }; epitweetr = derive2 { name="epitweetr"; version="0.1.28"; sha256="0iqdn1vc3h3ng10vhljnr8bs5sn0mnfwpv11zq1dvw6yyh9b5ia6"; depends=[bit64 dplyr DT emayili ggplot2 httpuv httr jsonlite keyring magrittr plotly plyr readxl rgdal rgeos rmarkdown rnaturalearthdata rtweet shiny sp stringr tidytext tidyverse tokenizers xml2 xtable]; }; - eplusr = derive2 { name="eplusr"; version="0.14.1"; sha256="1kgpsbsva8dbvzsd0wpxbk53rixxc0dqava9jfhjdpnm704x8bjh"; depends=[callr checkmate cli crayon data_table hms lubridate processx progress R6 RSQLite stringi units]; }; + eplusr = derive2 { name="eplusr"; version="0.14.2"; sha256="01i0q1fircpshilf0fw4c31lg94wjrsgxadkbc09bp2s4s7l9xzq"; depends=[callr checkmate cli crayon data_table hms lubridate processx progress R6 RSQLite stringi units]; }; eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.6-1.1"; sha256="1qlj4cl7mh5k52v2ippfs3cish5iadnix5w46p25hjqiriksclna"; depends=[elasticnet irr lassoshooting Matrix survival]; }; + epocakir = derive2 { name="epocakir"; version="0.9.7"; sha256="1i3hiyk8337cpfir25j9afjq6kjy4p2s407nv66kzxp9945fjc8i"; depends=[dplyr ellipsis lubridate magrittr rlang tibble tidyr tidyselect units vctrs]; }; eponge = derive2 { name="eponge"; version="0.1.0"; sha256="19wd80l35acij793spxglcwz346i2iivk6n0q2304wjcca6qzds7"; depends=[rlang]; }; epos = derive2 { name="epos"; version="1.0"; sha256="0z3r0128ql1jd8nkadia9w97g4nr3w4azvhpj7bjcaf3smh733d8"; depends=[cowplot ggplot2 gridExtra hash mongolite stringr testthat TopKLists VennDiagram xtable]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epsiwal = derive2 { name="epsiwal"; version="0.1.0"; sha256="0lmcmiqcc1pjj1d0zyn0hc23if1lkm85p6vcjqbddpnv9ags2mbh"; depends=[]; }; - epubr = derive2 { name="epubr"; version="0.6.2"; sha256="1kwqm8lnqvb9lpxiwx3llvh3k6qp9rl07rfyawyd3g4ngdfyg581"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; - epwshiftr = derive2 { name="epwshiftr"; version="0.1.2"; sha256="02qqw65pw1gk8yvw86ksbd2xdriavzavq7r378hp19pf7hzvr8bp"; depends=[checkmate data_table eplusr fst future_apply jsonlite progressr psychrolib rappdirs RNetCDF units]; }; + epubr = derive2 { name="epubr"; version="0.6.3"; sha256="1cpsxx02qcj3brr3ddy8dbnaf6wxf42s9y3kx8fq5ki3pmlwry7g"; depends=[dplyr magrittr tibble tidyr xml2 xslt]; }; + epwshiftr = derive2 { name="epwshiftr"; version="0.1.3"; sha256="11vfs2r2fzbdd3r0s8ikafgq9ins06ym73wqxyijz60h75py4ic7"; depends=[checkmate data_table eplusr fst future_apply jsonlite progressr psychrolib rappdirs RNetCDF units]; }; epxToR = derive2 { name="epxToR"; version="0.4-1"; sha256="00m64ham9fd9dsw37ic2m62fy4pvmwfwmjx8cg6n4rwbgq9q49sg"; depends=[httr XML]; }; - eq5d = derive2 { name="eq5d"; version="0.9.0"; sha256="0lasidbh4h4wcfy5bin9axcwy8pvhsshlqjq6n04q2xdzg6h7q8w"; depends=[]; }; + eq5d = derive2 { name="eq5d"; version="0.10.0"; sha256="0yy19z5a0hkmd8j48kkjlyjs32zv1a7b0f8ykk7cjl8irai7yiys"; depends=[]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; equalCovs = derive2 { name="equalCovs"; version="1.0"; sha256="18w7panyd6mhdr3x1iz9fkrw7min22rishs4xhkxgxs3nnyglkrn"; depends=[]; }; equaltestMI = derive2 { name="equaltestMI"; version="0.6.1"; sha256="09wh4907vf54z3g2a1i1j4m5vkaz97jp3qyrmxbg0bbbq0c68ffg"; depends=[lavaan]; }; - equatags = derive2 { name="equatags"; version="0.1.0"; sha256="1269aay5bnm3r9vcpm09d7r4xxhbyh5f7a3nzw73248wv8x4kkhy"; depends=[locatexec rappdirs xml2 xslt]; }; + equatags = derive2 { name="equatags"; version="0.1.1"; sha256="0rw9vipqk0gdkd73b04lw13fs5pjdvjqnn17n7xg1z0fk11k4qqw"; depends=[locatexec xml2 xslt]; }; equate = derive2 { name="equate"; version="2.0.7"; sha256="07cji0z139fk70d4wvrpk5m34fq1pfnqrsw336lgnp5a7zp3jz7n"; depends=[]; }; - equateIRT = derive2 { name="equateIRT"; version="2.1.0"; sha256="1g8gs00ralh5zw1fv3xd4c2xrb8gxgb7srcp0hgbpr0f7hw53fjm"; depends=[mirt statmod]; }; + equateIRT = derive2 { name="equateIRT"; version="2.2.0"; sha256="1w6abkh55lvlh3vxf1wbf2k7f2qfhmylwvpb6nq8jk31bjngnf9r"; depends=[mirt statmod]; }; equateMultiple = derive2 { name="equateMultiple"; version="0.1.0"; sha256="0ciwzaybr15r5b72mba9hhxlnbyfbc895a2yj6wz25dghcs6vlhx"; depends=[equateIRT numDeriv Rcpp RcppArmadillo statmod]; }; equatiomatic = derive2 { name="equatiomatic"; version="0.2.0"; sha256="16lq6nc3i8qsp9z177nrldc6bk2jblx11k1pd9vib5876469av5i"; depends=[broom broom_mixed knitr]; }; equivUMP = derive2 { name="equivUMP"; version="0.1.1"; sha256="05ihbr6dd9qv89ll90ynk4g3d3xy2w5q0m696djfa63f1x92c01w"; depends=[]; }; equivalence = derive2 { name="equivalence"; version="0.7.2"; sha256="170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79"; depends=[boot lattice PairedData]; }; equivalenceTest = derive2 { name="equivalenceTest"; version="0.0.1.1"; sha256="1lr1qc4mv8f9hwqidj1rwhxqm1fb8cf1hnb1k32xpdqwzsxbfa47"; depends=[cubature polynom Rdpack rootSolve]; }; era = derive2 { name="era"; version="0.3.1"; sha256="1x633yz49sfm27gby5sa6nbwx0mc1h606hxh5yvrjqnjlkk7xpgr"; depends=[magrittr pillar rlang vctrs]; }; - erah = derive2 { name="erah"; version="1.1.1"; sha256="1xl0ixn8dkap18la0qnaxb2qgf48vspfzybgwynpb3ib95gw9ji0"; depends=[igraph ncdf4 nnls quantreg Rcpp signal XML]; }; + erah = derive2 { name="erah"; version="1.1.2"; sha256="0dyjb2ja5199z8is11in11a95l2dbhaa2qj42pikh0ydk47qhd6v"; depends=[igraph ncdf4 nnls quantreg Rcpp signal XML]; }; erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; ercv = derive2 { name="ercv"; version="1.0.1"; sha256="0rs4yhm9sjnqkrgqqy6b8wj9fgk910hxc8d7zi4qwql0v1gid27l"; depends=[]; }; erer = derive2 { name="erer"; version="3.0"; sha256="143ygibzjsxlmf3p5ldcc4dpr3mcm873g4rwgb55q912bdhsn725"; depends=[lmtest systemfit tseries urca]; }; - ergMargins = derive2 { name="ergMargins"; version="0.1.2"; sha256="1ns5rkkja4f8jd2g2g0xvkvisg9agaxfgw8a82kq0hcx4k29xvga"; depends=[btergm ergm Matrix network numDeriv sna statnet xergm_common]; }; - ergm = derive2 { name="ergm"; version="3.11.0"; sha256="1wp93y0sjw2ybaflkzw7q7blf6x5pkrcnyk5wcxk9hmd9fs0cmaf"; depends=[coda lpSolve MASS Matrix network purrr rlang rle robustbase statnet_common tibble trust]; }; - ergm_count = derive2 { name="ergm.count"; version="3.4.0"; sha256="1bvbqckssqj91q56nz17mrvadk1i2mm301z9rj8qkh8116fwf93w"; depends=[ergm network statnet_common]; }; - ergm_ego = derive2 { name="ergm.ego"; version="0.6.1"; sha256="1khmlx0s8v5dhl38b1bqdb6lpfp7adrfs7r0lcg5hrczlxsy293f"; depends=[coda ergm network purrr RColorBrewer statnet_common tibble]; }; - ergm_rank = derive2 { name="ergm.rank"; version="1.2.0"; sha256="1vc96rjsqvs6ybnzkpv12h0hsrx2s96k4hjilzjpjnhbazh5vynz"; depends=[ergm network statnet_common]; }; + ergMargins = derive2 { name="ergMargins"; version="0.1.3"; sha256="0liq64qjd3b0v5pcsvfmvmv7dr0ak4ld2mbin8w2wcdnvpfajjy5"; depends=[btergm ergm Matrix network numDeriv sna statnet_common]; }; + ergm = derive2 { name="ergm"; version="4.1.2"; sha256="184vsjscza8d3h0yp3zyjl75k8p7g93wwxn360ji793n6gsnxg0s"; depends=[coda lpSolveAPI MASS Matrix memoise network purrr rlang rle robustbase statnet_common tibble trust]; }; + ergm_count = derive2 { name="ergm.count"; version="4.0.2"; sha256="1lav2nndkmiv8a3ns1cqdl7hflz97hcd8pwakv3ywwmlwk5x6vii"; depends=[ergm network statnet_common]; }; + ergm_ego = derive2 { name="ergm.ego"; version="1.0.0"; sha256="11jp90j8fs2ix5v73syal5cy44fs0d6fs1mgnirpn9a66fhyblvf"; depends=[coda dplyr egor ergm network purrr RColorBrewer statnet_common survey tibble]; }; + ergm_rank = derive2 { name="ergm.rank"; version="4.0.0"; sha256="00nafn7bin7r4wixl2qgbybghx7bs7bc2jhj1ldk6rb9pmns739h"; depends=[ergm network statnet_common]; }; ergm_userterms = derive2 { name="ergm.userterms"; version="3.10.0"; sha256="1aqrgdayh73dkr71gf8vawlj6qgv66pxr4klxgqb6ffan66b5p8g"; depends=[ergm network statnet_common]; }; ergmclust = derive2 { name="ergmclust"; version="1.0.0"; sha256="18vx02vr2wi0gw09g4hxb8glf38y06v4a0c6q666qv8bgcb0pgkw"; depends=[igraph lda MASS quadprog Rcpp RcppArmadillo viridis]; }; ergmharris = derive2 { name="ergmharris"; version="1.0"; sha256="1bfijhsljlykb94wi25lbpv35zkmgqpmgzmxcq98gjvzbn5j9pdq"; depends=[]; }; ergmito = derive2 { name="ergmito"; version="0.3-0"; sha256="0ajfx8g31p0lf0ajrgssb9lkhs1bxkz19z3q99l500znlivc2fy2"; depends=[ergm MASS network Rcpp RcppArmadillo texreg]; }; - erify = derive2 { name="erify"; version="0.2.0"; sha256="1xin6zljxn8jl45zv4ffjkzsrz98akfqz8vss9a6mb13frgcmi97"; depends=[glue knitr magrittr rlang rstudioapi]; }; + erify = derive2 { name="erify"; version="0.3.0"; sha256="1lzkk2wb86msaw8wfvvn799jzk3x6p3mqfmls5phk75sh49symwp"; depends=[glue knitr rstudioapi]; }; erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; err = derive2 { name="err"; version="0.2.0"; sha256="1915b0vmqdd8whwdrqjphld1jaxawh5b7di6wf7q3sx779lblsrs"; depends=[]; }; @@ -8360,10 +8701,10 @@ in with self; { errors = derive2 { name="errors"; version="0.3.6"; sha256="1404314glbqnicrwnfzmxxf7l97pgrb2gjkgkwn100p0sj83kjdg"; depends=[]; }; errum = derive2 { name="errum"; version="0.0.3"; sha256="18frrfnhnmg4fjlpfwj8aklzfwafpwqvagm0aschkqc8mz6wnjbz"; depends=[Rcpp RcppArmadillo]; }; es_dif = derive2 { name="es.dif"; version="1.0.2"; sha256="1swxg8mdp9jj9f0x0cawhhbx8gmmpsgqlbifx2v04a2vkgdkigqf"; depends=[]; }; - esDesign = derive2 { name="esDesign"; version="1.0.2"; sha256="16dhddw4gp210bb1mmx5df1ziffadiz06s4i3znnzac8rv5564hp"; depends=[]; }; + esDesign = derive2 { name="esDesign"; version="1.0.3"; sha256="0lnz40d8s9pmxccsbd9g80n0k454xgicjfdpbfrq7rnyb4pdk9l2"; depends=[]; }; esaBcv = derive2 { name="esaBcv"; version="1.2.1"; sha256="0hgjcdbiy1a71vsb2vcyp0xmhy6wi4nlh1sqsfb2vxckc95i9i21"; depends=[corpcor svd]; }; esaddle = derive2 { name="esaddle"; version="0.0.7"; sha256="1r79qcirlx7g9w523nz81f5f22paid5dhag2lqj7jf33w0ggaknn"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; - esaps = derive2 { name="esaps"; version="0.1.0"; sha256="1rchs4i7n221gyhj9kbka4zmi2lf72q3ak2pdxkr7w6pcx6803yz"; depends=[plyr readODS readxl]; }; + esaps = derive2 { name="esaps"; version="0.2.2"; sha256="0yys40ki5dy62fds4kfwji6qzq5mbmvqps85maqgsimal7p7gx3n"; depends=[dplyr plyr readODS readxl tidyr]; }; esback = derive2 { name="esback"; version="0.3.0"; sha256="09k895028hqa62m8fhbg5b33ry0in6kbrw0lnphn0rgjhlifxp4z"; depends=[esreg]; }; esc = derive2 { name="esc"; version="0.5.1"; sha256="0gns7gz55p6pha05413r3hlvd7f2v1amxkg13d197mab1ypqic7q"; depends=[]; }; escalation = derive2 { name="escalation"; version="0.1.4"; sha256="1iyjp20rzz3lrgn183jvjcf7vvmk66f3rgyv22s2ja4b98598ha4"; depends=[binom BOIN dfcrm DiagrammeR dplyr gtools magrittr purrr RColorBrewer stringr tibble tidyr tidyselect trialr viridis]; }; @@ -8371,9 +8712,9 @@ in with self; { eshrink = derive2 { name="eshrink"; version="0.1.2"; sha256="0min4j1dyd08i0fyn9a4iasjlhq08bn74bjz8vj1gq9l114v795k"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; esmprep = derive2 { name="esmprep"; version="0.2.0"; sha256="076sm26mkkvig2g04k32z2dlp2h9gnqgzckhirl4pqm01siknl61"; depends=[lubridate]; }; - esquisse = derive2 { name="esquisse"; version="1.0.1"; sha256="051p49g6b5j9j4w3rahgs7cf2v22mni4680s0as83l5p9rhmx41n"; depends=[datamods ggplot2 htmltools jsonlite rlang rstudioapi scales shiny shinyWidgets styler]; }; + esquisse = derive2 { name="esquisse"; version="1.0.2"; sha256="1xfjpbsf7idmwvniji4n64j0wa7h0hr7r9s3rhxsg0yl4acjxfdc"; depends=[datamods ggplot2 htmltools jsonlite rlang rstudioapi scales shiny shinyWidgets]; }; esreg = derive2 { name="esreg"; version="0.5.0"; sha256="1njwqm3hrcxwl6y7gwa4zq0q5139293qk503ahw23dxwzdsiy2z5"; depends=[Formula quantreg Rcpp RcppArmadillo]; }; - ess = derive2 { name="ess"; version="1.0"; sha256="0nqmpih9iyny4ss6llhjq08lfc8n0znz0fdmsjn1js48r85rcqxb"; depends=[igraph Matrix Rcpp]; }; + ess = derive2 { name="ess"; version="1.1.2"; sha256="1cmw20nn39ssyqiyn50w0ws28mq4cd26yhzr7mv97haaqjjjkv5h"; depends=[igraph Rcpp]; }; essHist = derive2 { name="essHist"; version="1.2.2"; sha256="0rvlxfcl42h4pjqf37mx7bc4k21iwvnys6l5rf2jsl7yk1b9hmbn"; depends=[Rcpp]; }; essentials = derive2 { name="essentials"; version="0.1.0"; sha256="163wv4szfanbpiw5f6lhw1dnns5prql43iz27zgcp5z2rsxlb894"; depends=[]; }; essurvey = derive2 { name="essurvey"; version="1.0.7"; sha256="07z6bdk76528cg5pdchh1kcsm7xrhpqzzxm2llyh0y12fa7mwscy"; depends=[haven httr rvest tibble xml2]; }; @@ -8384,39 +8725,41 @@ in with self; { estmeansd = derive2 { name="estmeansd"; version="0.2.1"; sha256="053mf9yq095dvlz2cj5haav6yabvgj78qpp411xd9nr1ac17jxz9"; depends=[metaBLUE]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; estprod = derive2 { name="estprod"; version="1.2"; sha256="0pnpg8w6i1dmkcn6afj2jsm5mzvbxka80np1bldcxgmylrp5s35p"; depends=[boot Formula gmm lazyeval minpack_lm]; }; - estudy2 = derive2 { name="estudy2"; version="0.9.2"; sha256="07shz2lvfz19khy97a0zfj2l4w6z3vibk8a8r6b5afs8w3a66yaa"; depends=[matrixStats quantmod Rcpp zoo]; }; + estudy2 = derive2 { name="estudy2"; version="0.9.3"; sha256="0wfzcx00f2378aza2wsg1s5klzc3q2sf1fpdrz6njdix29g7g45m"; depends=[matrixStats quantmod Rcpp zoo]; }; esvis = derive2 { name="esvis"; version="0.3.1"; sha256="0bb91khnrn8v3d6hbbin72032w7w8p0jchbr0bzwyfq5f6l4hwka"; depends=[dplyr ggplot2 Hmisc magrittr purrr rlang sfsmisc tibble tidyr]; }; - etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; - etasFLP = derive2 { name="etasFLP"; version="2.1.0"; sha256="1dpiilb2ylkk1fidjd1x3s9n1pj9h66yg2wx4faxbn69dkky9qnd"; depends=[fields mapdata maps]; }; + etable = derive2 { name="etable"; version="1.3.1"; sha256="17dga1hz29jjdclhhwn1hrvlkdfbcbqmk233vc00s59pbmgsav06"; depends=[Hmisc]; }; + etasFLP = derive2 { name="etasFLP"; version="2.2.0"; sha256="1030l3g6hghgcmji934g5pc01p2hld09mv3zna58xzzb4wsmz167"; depends=[fields mapdata maps]; }; ether = derive2 { name="ether"; version="0.1.6"; sha256="1f3phh5vdfvlxqrpzsn6ysz0q3mbhr862fzsd3sp8m8qhry86cbx"; depends=[dplyr httr jsonlite Rmpfr]; }; ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.8"; sha256="1ipwh4kxraa7rx6kvjpwq3b6jb7b4aa9kwcj7vrd4xhj4yxymqzb"; depends=[circlize cowplot dplyr ggalluvial ggplot2 ggridges magrittr reshape2]; }; - etl = derive2 { name="etl"; version="0.3.9"; sha256="133kas3pf863dlgxjhl2x61xkjl5vndsav69zskj9ngz875avjm2"; depends=[DBI downloader dplyr fs janitor lubridate readr rlang rvest stringr tibble usethis xml2]; }; + etl = derive2 { name="etl"; version="0.4.0"; sha256="0ccixl881kxljnz47c78r96wrj2l7mdxs2rxqf0psbkfwybd1pb4"; depends=[DBI downloader dplyr fs janitor lubridate readr rlang rvest tibble usethis xml2]; }; etm = derive2 { name="etm"; version="1.1.1"; sha256="1hvrplmdpjjpjji663rw0vjbbrzj2nvr04d1nkc8bf46p4ixyxgy"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; etrader = derive2 { name="etrader"; version="0.1.3"; sha256="1iq80vn7j2sywlla01f6vrfyjjs4lk606kc8z4xlfqj8d27r9r9w"; depends=[dplyr httr jsonlite magrittr purrr rvest urltools]; }; + etrm = derive2 { name="etrm"; version="1.0.1"; sha256="0jzwvz2ddh3w4y1kgqwdj7py376w6dwbvqhjmiiikr7qsgap23fk"; depends=[ggplot2 reshape2]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; eudract = derive2 { name="eudract"; version="0.9.3"; sha256="0bbs9lqmw992q6d9bp7xsssnn8hipb4zx9lyvpdakfmv08ykl3fn"; depends=[dplyr magrittr tidyr xml2 xslt]; }; eulerian = derive2 { name="eulerian"; version="1.0"; sha256="0yhpnx9vnfly14vn1c2z009m7yipv0j59j3s826vgpczax6b48m0"; depends=[graph]; }; - eulerr = derive2 { name="eulerr"; version="6.1.0"; sha256="1r7y01vj293r1lhxk4anqqq6k2gnflzx2a2sfsyf7ccqmw95w0cj"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; - eurlex = derive2 { name="eurlex"; version="0.3.5"; sha256="05qxw6qj6cqr7jwsxhvay7r5q7g4s0pmr2n062cail9pm8rs97gr"; depends=[antiword dplyr httr magrittr pdftools readr rlang rvest stringr tidyr xml2]; }; - europepmc = derive2 { name="europepmc"; version="0.4"; sha256="174nnyc2mbgqxb5kgqabn1vf71c2mps7ig2bclq4is0f7nb64pym"; depends=[dplyr httr jsonlite plyr progress purrr rlang tibble tidyr urltools xml2]; }; + eulerr = derive2 { name="eulerr"; version="6.1.1"; sha256="0lldp2319qd08y87f862gx8a77rvikcnkmdl9xgx4glynfs3hk19"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; + eurlex = derive2 { name="eurlex"; version="0.3.6"; sha256="00x02q9dm4f2y8appa24n67d5l0994ll4jsgl2jfsk06h8y0m10i"; depends=[antiword curl dplyr httr magrittr pdftools readr rlang rvest stringr tidyr xml2]; }; + eurocordexr = derive2 { name="eurocordexr"; version="0.2.2"; sha256="081p9qs09xif2cck0gmmqgzaly1r2p77kla2nhcvjgxgdylbsdkd"; depends=[data_table fs lubridate magrittr ncdf4 ncdf4_helpers PCICt]; }; + europepmc = derive2 { name="europepmc"; version="0.4.1"; sha256="16japbndid34shqg8n0bmjrxn84xmhrylvz832zclcllm6i93fn1"; depends=[dplyr httr jsonlite plyr progress purrr rlang tibble tidyr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; - eurostat = derive2 { name="eurostat"; version="3.6.84"; sha256="03mfjjc3jjdrg4plb31dm4s4fv8cfmwpa3vkbcjjzz7jy8zyn7yq"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr tidyselect]; }; + eurostat = derive2 { name="eurostat"; version="3.7.5"; sha256="1398jmg4z9lnlm7hsr492ybj958gnn4hk5fmy7dillfvimx9x2gy"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate magrittr RColorBrewer readr RefManageR sf stringi stringr tibble tidyr]; }; eva = derive2 { name="eva"; version="0.2.6"; sha256="1b5hrwgdbw19c63ywhkvxlz3843c0mgvsxlmab6zv6r2lrrdkf62"; depends=[EnvStats Matrix]; }; evabic = derive2 { name="evabic"; version="0.0.3"; sha256="0wd5wjsj9gbvbncaa97g1sp0211aq3nn5jc91lvhka6h34wxkcgc"; depends=[]; }; - evalITR = derive2 { name="evalITR"; version="0.2.0"; sha256="0kkvkbq8w4d04sgb0x0wbrq4ilc5p4cwywrsv7dlzyjb4a59rczl"; depends=[]; }; + evalITR = derive2 { name="evalITR"; version="0.2.1"; sha256="1pi8l2cx8ma35lhclzjdghd2lz6cp20nb0ihs01sllj7hbn450gh"; depends=[]; }; evaluate = derive2 { name="evaluate"; version="0.14"; sha256="0a2y7j534gbgixkwj9r1z76l2vssw4g1hznzbpclc076wkdqpj58"; depends=[]; }; - evaluator = derive2 { name="evaluator"; version="0.4.2"; sha256="0k2fwim023lbnxq67hhv03cds824x8n374pnqsk67ajgahxwh3by"; depends=[cli crayon dplyr extrafont ggplot2 magrittr mc2d purrr readr readxl rlang rstudioapi scales stringi tibble tidyr vctrs viridis]; }; + evaluator = derive2 { name="evaluator"; version="0.4.3"; sha256="1gccymjb1ad3xw3kmqafchazv9rid6v6c3h8w96ai5b2jh8zlgwk"; depends=[cli crayon dplyr extrafont ggplot2 magrittr mc2d purrr readr readxl rlang rstudioapi scales stringi tibble tidyr vctrs viridis]; }; evclass = derive2 { name="evclass"; version="1.1.1"; sha256="00lbhcgswpv0amz0mb93kx9p91sf0d7zvxfw9i8x1zpmpfd6nhcj"; depends=[FNN]; }; - evclust = derive2 { name="evclust"; version="2.0.0"; sha256="1r97slc6wiqc9fkza02mxzacjw0kinaf2c4yjbwl7f6z1a24jbyb"; depends=[FNN kernlab limSolve MASS Matrix mclust plyr quadprog R_utils]; }; + evclust = derive2 { name="evclust"; version="2.0.2"; sha256="107x61vmkfmy3bmcaywz96qj35bmz4nydd0zn9amm2xnbb37lg31"; depends=[FNN limSolve Matrix mclust plyr quadprog R_utils]; }; evd = derive2 { name="evd"; version="2.3-3"; sha256="1d2r8ppblxrq6s60pf0gv4rp8ja58j8lbpax8a996ais1hpfzi9g"; depends=[]; }; evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; }; event = derive2 { name="event"; version="1.1.1"; sha256="0w3v8j61y7vr0cjl8a1rkvi4pyjlfhmzzn1n4dgkivac4iafzqjj"; depends=[rmutil]; }; eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; }; + eventTrack = derive2 { name="eventTrack"; version="1.0.1"; sha256="0ha108d801jqlx6qgvwikn7lnyq0gijmaxc96c7sdzawn3b4s93w"; depends=[muhaz survival]; }; eventdataR = derive2 { name="eventdataR"; version="0.2.0"; sha256="11apbbj68x1kxpwvihf4ng7wxy54jl1aw7r9hyq6gn7h8sk6lpjn"; depends=[]; }; - eventglm = derive2 { name="eventglm"; version="1.0.2"; sha256="1bpr5xjziwh20xvmmh5rch6pqd2pfiirmzffp4lhkfz43ll278nr"; depends=[sandwich survival]; }; + eventglm = derive2 { name="eventglm"; version="1.2.1"; sha256="0w8nqdkw4i4d6y12a5b0l587f2h2pgkjhif93nbs27n4kvv42idm"; depends=[geepack sandwich survival]; }; eventr = derive2 { name="eventr"; version="1.0.0"; sha256="08ljjvfrnfmi49b9bgizvvswxydln8ny901grn5j288pq0djjqyk"; depends=[dplyr magrittr purrr]; }; - events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; eventstream = derive2 { name="eventstream"; version="0.1.0"; sha256="0imrs872b6fjvw74smniiiicvizyign6wmwwybljk704cshzcy2f"; depends=[abind AtmRay changepoint dbscan glmnet MASS tensorA]; }; eventstudies = derive2 { name="eventstudies"; version="1.2.2"; sha256="01vpd0gnxaibxn3nq6618rxlwapm86idz86n0wj5kfz4a9kj7lsx"; depends=[boot sandwich testthat xts zoo]; }; evgam = derive2 { name="evgam"; version="0.1.4"; sha256="0xdmqhg77dbb47pwzgj2hxs83a9yscknz9pmh9a33snaba9llc6r"; depends=[mgcv Rcpp RcppArmadillo]; }; @@ -8427,7 +8770,7 @@ in with self; { evir = derive2 { name="evir"; version="1.7-4"; sha256="1h7a7z7v5k33y5hsdfczsri3vpbwspfgazhv4saknv2h11rgfpki"; depends=[]; }; evmix = derive2 { name="evmix"; version="2.12"; sha256="02rabc9snci00s1x7h0svfr66lmw1wjcdg0149wc52mnccsdaivf"; depends=[gsl MASS SparseM]; }; evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; - evolqg = derive2 { name="evolqg"; version="0.2-8"; sha256="1zcpm7bpw5zpafbj7lv7kfpaqknqyhlss5343ps14lqc73kq70wc"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; + evolqg = derive2 { name="evolqg"; version="0.2-9"; sha256="1y1pq2hdilqkj6hk02km9aaaynz1calcw00r5k1rxlc4wfq1wx70"; depends=[ape coda expm ggplot2 igraph Matrix MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; evoper = derive2 { name="evoper"; version="0.5.0"; sha256="064fcpd04ws8v6sl0bakiw34jmmfpg1w5pkq94y2gh1c576x4vwz"; depends=[boot data_table deSolve futile_logger ggplot2 plot3D plyr reshape RNetLogo rrepast]; }; evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; }; @@ -8438,36 +8781,40 @@ in with self; { exact2x2 = derive2 { name="exact2x2"; version="1.6.5"; sha256="05xkzyyk1dfxq2f6aczwiyinznaxfd6ipd680zsbcd0iq44n7wd1"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-32"; sha256="0p7h7w470p5qpsbrhw12zlsshyai56za5dsdva8cf9sikn0955qr"; depends=[]; }; - exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; - exactextractr = derive2 { name="exactextractr"; version="0.6.0"; sha256="1jawvpwqqgdc9cnsqxzcmhz7hwnq0m7pfa2ii3dghhyj080b3p85"; depends=[raster Rcpp sf]; }; + exactci = derive2 { name="exactci"; version="1.4-2"; sha256="08phqmpj7f6mjbwfnykqmfmg7g9h6ksj3hyryn79d7kwxyh994i7"; depends=[ssanv testthat]; }; + exactextractr = derive2 { name="exactextractr"; version="0.7.0"; sha256="1fwbl0rn0990cs2rvvwjbflp9mall6hjkindpjmdcy6qafiviid6"; depends=[raster Rcpp sf]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exampletestr = derive2 { name="exampletestr"; version="1.6.3"; sha256="1higacpv57491vwm5b601s0w1279lvs1h5qyri4l8c92hr15n0pr"; depends=[checkmate fs magrittr ore purrr readr rlang roxygen2 rstudioapi strex stringr styler usethis withr]; }; + exampletestr = derive2 { name="exampletestr"; version="1.6.5"; sha256="144rfi83g79xhw3v5vn4qfqmxixy9pk2ir8dm42qk0jhd9v2awng"; depends=[checkmate fs magrittr ore purrr readr rlang roxygen2 rstudioapi strex stringr styler usethis withr]; }; exams = derive2 { name="exams"; version="2.3-6"; sha256="1cn0gmaayv857zl7l7zmnblmpx84qkjxqrigrymy578y04qjc4zx"; depends=[]; }; exams_mylearn = derive2 { name="exams.mylearn"; version="1.4"; sha256="0cswbynd1acrvdwhgg3vlgl80v0qk22kg2hacbc6y08s4367srly"; depends=[exams glue pkgbuild stringi stringr xml2]; }; exams2sakai = derive2 { name="exams2sakai"; version="0.3"; sha256="0lgnk2g4q0vbkvcrhb815lah24rhaknnmsbhhkgbdkl0c5mx1yjg"; depends=[exams glue stringi stringr xml2]; }; exceedProb = derive2 { name="exceedProb"; version="0.0.1"; sha256="02pb8b0rxygbv6501rcr2hb0bhz1r78k5znav161kk25fb9bxs5v"; depends=[BH Rcpp]; }; excelR = derive2 { name="excelR"; version="0.4.0"; sha256="1pb4sy54zjv5vrh7gjjv7qlpab74km6mfsmfyl0yhmr0jx01hrw0"; depends=[htmlwidgets jsonlite]; }; excelstrippr = derive2 { name="excelstrippr"; version="0.1.2"; sha256="1ly76qja9b5l3xwfhigm1apd114y2iq5wdl27sd2h1y80n8xxf2v"; depends=[dplyr readxl tidyr]; }; - excerptr = derive2 { name="excerptr"; version="2.0.0"; sha256="1xglpg9i45dd103ahj46lin42x9c8lgff2b5c4k3799gaki9sjzz"; depends=[checkmate reticulate]; }; - excursions = derive2 { name="excursions"; version="2.5.1"; sha256="1ipij6i7f7qdzhgz5s5kymb43zvvfhdpd7ybyvljlkqyla15cwnx"; depends=[Matrix sp withr]; }; + excerptr = derive2 { name="excerptr"; version="2.0.1"; sha256="0lmcxlpxvldxwqxrprqq39hk5f770ii1x38jm2jbs4n75smp4m21"; depends=[checkmate reticulate]; }; + excursions = derive2 { name="excursions"; version="2.5.2"; sha256="1a0vywxhh0bxjcf8v5gdk1n6cjxrby7750a7qdwhzsgxna3l3gga"; depends=[Matrix sp withr]; }; exdex = derive2 { name="exdex"; version="1.0.1"; sha256="15wdi24fq8q4ja4527k1adv6lkzyhylp8nwlsrb91q0sbmmprrqs"; depends=[chandwich Rcpp RcppArmadillo RcppRoll]; }; + exdqlm = derive2 { name="exdqlm"; version="0.1.2"; sha256="0wkiihdvgf7lyzv02l10spxcn127w1jblz6fbr7yf16mfq0m9mlk"; depends=[brms coda crch dlm FNN GeneralizedHyperbolic HyperbolicDist LaplacesDemon magic tictoc truncnorm]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; exifr = derive2 { name="exifr"; version="0.3.2"; sha256="0iqm513h7951q3hg8maf2hbprqmsm93cb3mbg3g91qawpx77494c"; depends=[curl jsonlite plyr rappdirs tibble]; }; exiftoolr = derive2 { name="exiftoolr"; version="0.1.5"; sha256="0amfv2avnyvlz8mhmzmklpqykshdxrcxivans6j9hnimj0ygw6ad"; depends=[curl data_table jsonlite zip]; }; + exoplanets = derive2 { name="exoplanets"; version="0.2.2"; sha256="0jzqzw0sn2cixxl6wdikz6cmm2qijxcjp81c98dfqamjcnbpqc1f"; depends=[cli httr memoise readr tibble]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; expSBM = derive2 { name="expSBM"; version="1.3.5"; sha256="0k8nkwqrcmmhv0x8a2np1rm5cyc9glyvndwdbnp03v0wrg8121sw"; depends=[blockmodels gtools mclust Rcpp RcppArmadillo]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; - expands = derive2 { name="expands"; version="2.1.2"; sha256="15r5wld63kwk3kcl5x09dj0n1mgcl076lcjsmf0vbh10x4n0avrk"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; + expands = derive2 { name="expands"; version="2.1.3"; sha256="00zb57gmpj86c7rvpqywpn4c5wl51immps935n3hd2fyk73vqljh"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; + expectreg = derive2 { name="expectreg"; version="0.51"; sha256="0ab9xkfa3wkhrzj7lj6jgdcxzgp1xjsk6ah71f6qd11bafq7j720"; depends=[BayesX colorspace fields Matrix mboost quadprog Rcpp RcppEigen]; }; experDesign = derive2 { name="experDesign"; version="0.1.0"; sha256="1v2j3jyxyzwkzc3y5n6pzd31yigkfwcmf12df3104m3kn86iq81r"; depends=[]; }; experiment = derive2 { name="experiment"; version="1.2.0"; sha256="0f8h4pj2y7cd2s1q44q4mrg9cirnpz0bkn4xm04hz1rpjxb4xlv1"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-6"; sha256="0iai25cglcdnf44d2d1fz1xpw4q600my4zq4493fk4cs5673mlf7"; depends=[]; }; - explor = derive2 { name="explor"; version="0.3.7"; sha256="0g3a1x3nf4m5pvc46j77jkqqm7z2radcswmy2kvspwj0l6dg6z04"; depends=[dplyr DT formatR ggplot2 highr RColorBrewer scatterD3 shiny tidyr]; }; + explor = derive2 { name="explor"; version="0.3.9"; sha256="0sfpw9lgpr9hyn93jwxhijbfqnj466wc5ilszki2r7ziik3nb79i"; depends=[dplyr DT formatR ggplot2 highr RColorBrewer scatterD3 shiny tidyr]; }; exploratory = derive2 { name="exploratory"; version="0.3.13"; sha256="164ykw514gfj185ckg3p8jfn7y5al12iab34fqyrkrqpj84gf1qd"; depends=[data_table DT ggplot2 ggridges lemon lm_beta mediation remotes shiny shinydashboard weights]; }; - explore = derive2 { name="explore"; version="0.7.0"; sha256="0iym10dk9ssczchlcv78n1dfpbapkmblskjy3sbaswwhvnchnskh"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble tidyr]; }; + explore = derive2 { name="explore"; version="0.7.1"; sha256="05hf6wk6vyqfxdhy9vl2f31ylr8hcmdgzjafyp6ifmwvydigrj94"; depends=[assertthat broom DBI dplyr DT forcats ggplot2 gridExtra magrittr MASS odbc rlang rmarkdown rpart rpart_plot shiny stringr tibble tidyr]; }; exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; expm = derive2 { name="expm"; version="0.999-6"; sha256="1p5dapwv8ycxaysgi6imnby04i4kh1c5a2czqa4wygz0s8pr2y9c"; depends=[Matrix]; }; expose = derive2 { name="expose"; version="0.0.3"; sha256="0dlxlxm3g9d8vmgp13i1825z1jzah94ih1vyif46s43xq0nf9anj"; depends=[e1071 foreach gam ggplot2 glmnet Matrix nnet polspline RColorBrewer Rcpp repmis SuperLearner xgboost]; }; + expp = derive2 { name="expp"; version="1.2.5"; sha256="0hb4392biyy85gs7af4p9m7r51ijmqr7wp7c7b0i7lzdf1bnd7fz"; depends=[deldir rgeos sp spatstat_geom spdep]; }; expperm = derive2 { name="expperm"; version="1.6"; sha256="0cybna0q3qn3slyc4lv5rby4pr0xkwq0h6n7hl1zhsaqv4c2zc5b"; depends=[Rcpp]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; expss = derive2 { name="expss"; version="0.10.7"; sha256="0br10ydhv7xz297nzz3qql3cvs1950g1szshywcnxnf58limsw1y"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; @@ -8476,10 +8823,10 @@ in with self; { exsic = derive2 { name="exsic"; version="1.1.1"; sha256="1k6nqs9i4iivxnk4nkimp6zvdly274wibkmx9n0wz01gnzxqil0p"; depends=[markdown stringr]; }; extRC = derive2 { name="extRC"; version="1.2"; sha256="0mkvic9nr0asd0g04nlfiy81d7am9a3i65ibxyvbdwsxnf92p8ya"; depends=[MASS]; }; extRatum = derive2 { name="extRatum"; version="1.0.4"; sha256="1w4xfr7ps565xczmn6pr7g4551rj28df1j0y9vckvxdbb4dk1p11"; depends=[dplyr sf tidyr]; }; - extRemes = derive2 { name="extRemes"; version="2.1"; sha256="1b69r3mzl6hp3g3rqxyc77m8r40jyq7c2d87q85af7xqkn6hnxid"; depends=[distillery Lmoments]; }; + extRemes = derive2 { name="extRemes"; version="2.1-1"; sha256="00ps7yggp89sx1j0w6c8dk0la3k95rwjv1iz7rdfqy7i46xjf6as"; depends=[distillery Lmoments]; }; extWeibQuant = derive2 { name="extWeibQuant"; version="1.1"; sha256="08dzw5xfgqx0c7ac632c5mg5jmjjw7wwpcr4c9lvz5rv72ykh2rh"; depends=[]; }; extdplyr = derive2 { name="extdplyr"; version="0.1.5"; sha256="1zbnp0h0lv1dr40dhdw6ii8rmc5lxcq4wjsm83xpd3y8x9xpglnl"; depends=[dplyr lazyeval tidyr]; }; - extendedFamily = derive2 { name="extendedFamily"; version="0.2.0"; sha256="0dw5q4j9sxhsjvrwnbgf72hir6hj22p8fcqdc972d7hx04li7j02"; depends=[assertthat numDeriv]; }; + extendedFamily = derive2 { name="extendedFamily"; version="0.2.1"; sha256="0h1wply55cjclhblxmb4pd9qmiwk8vha7vk0i00ab46n7dc1yqa0"; depends=[assertthat numDeriv]; }; exteriorMatch = derive2 { name="exteriorMatch"; version="1.0.0"; sha256="0cdfj1n502iws1g03rk7x0c18zyazqf3vci9kjm6lrv4j2qwrvip"; depends=[]; }; extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; }; extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; }; @@ -8489,7 +8836,7 @@ in with self; { extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; extrafontdb = derive2 { name="extrafontdb"; version="1.0"; sha256="115n42hfvv5h4nn4cfkfmkmn968py4lpy8zd0d6w5yylwpzbm8gs"; depends=[]; }; extraoperators = derive2 { name="extraoperators"; version="0.1.1"; sha256="1clyp97ssmdq9ggbv3w5yskx7khnlm4ji7ym3k3b4bx1pazcw4q4"; depends=[]; }; - extras = derive2 { name="extras"; version="0.1.0"; sha256="05cr9k1cfc2j08lwpnhhc6i9nymmbbcd0l861430qqf146lksx5g"; depends=[chk]; }; + extras = derive2 { name="extras"; version="0.2.0"; sha256="08nlragdwl16ziykn0ygq78h6j8s2idzmhx2w3prrndkbbd4gqbp"; depends=[chk lifecycle]; }; extraterrestrial = derive2 { name="extraterrestrial"; version="0.1.0"; sha256="0clss1zwgw1497n2xif82kplr1w1ajs4xs02041ads3l8craj7y1"; depends=[]; }; extremeIndex = derive2 { name="extremeIndex"; version="0.0.2"; sha256="1zdw6ik2jh1fir01ay3ynw1l756ba05d5vqqcphnawvg0jkvhxvk"; depends=[boot evd evir gmm goftest]; }; extremeStat = derive2 { name="extremeStat"; version="1.4.0"; sha256="0fvkvlm47ri05w9h5qa937ijsc5lg51jc825wq9pmn7aiv58yxzm"; depends=[berryFunctions evd evir extRemes fExtremes ismev lmomco pbapply RColorBrewer Renext]; }; @@ -8498,22 +8845,23 @@ in with self; { extremis = derive2 { name="extremis"; version="1.2"; sha256="1gvizxv1ay788a21qjslrmi7qdbr8s2ryibyri6sp7xdkaqiixsn"; depends=[emplik evd MASS]; }; extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; exuber = derive2 { name="exuber"; version="0.4.2"; sha256="1kd06x4j9aibmf1arh652rcvdyhz4p0p3j1l241j78z7jrk417cj"; depends=[cli doRNG doSNOW dplyr foreach generics ggplot2 glue lubridate progress purrr Rcpp RcppArmadillo rlang tibble tidyr vctrs]; }; - eye = derive2 { name="eye"; version="1.2.0"; sha256="18v3msqn5max39pxh56npzfg0a3kbfln0bfqdxk86jmjvh77mrk5"; depends=[cli dplyr english lubridate magrittr pillar purrr rlang stringr tibble tidyr tidyselect]; }; + eye = derive2 { name="eye"; version="1.2.1"; sha256="0la9hlpryqczi6v6pyjx2hdhhdgm3aijs45v1nj76a867zmf77k9"; depends=[cli dplyr english lubridate magrittr pillar purrr rlang stringr tibble tidyr tidyselect]; }; eyeRead = derive2 { name="eyeRead"; version="0.0.4"; sha256="0f6knzr4fdipbrvcsk0q9yjvkjjyc4wc252lq2s41gdvj3hv575d"; depends=[data_table tibble tidyr]; }; eyeTrackR = derive2 { name="eyeTrackR"; version="1.0.1"; sha256="14m7l8v0ry1ami1jl0xjp743m1ycklgfwi06vk5amppdp5w3w3qr"; depends=[data_table plyr stringr]; }; eyedata = derive2 { name="eyedata"; version="0.1.0"; sha256="1xnll3x1sm0rv6hq2w22wa9n5qm8r827m7sr3dj54xb1i8j75gj3"; depends=[dplyr]; }; - eyelinker = derive2 { name="eyelinker"; version="0.2.0"; sha256="14rfcdxad9iazwd46q6bm8gg1ryh6s8kf7arj00hhb7xz3gvk9c2"; depends=[intervals readr stringi stringr tibble]; }; + eyelinker = derive2 { name="eyelinker"; version="0.2.1"; sha256="0wijd45p6j2qal6wnj7zywks8p9v3m9cmyp7axmk44mrjdjx2i71"; depends=[intervals readr stringi stringr tibble]; }; eyetracking = derive2 { name="eyetracking"; version="1.1"; sha256="0ajas96s25hjp3yrg42hp78qjhl1aih04mjirkskx32qsyq5hfpv"; depends=[]; }; ez = derive2 { name="ez"; version="4.4-0"; sha256="0a58s94x576dfz7wcbivrr2hmdh5x1vy16zwkqp9fmdzqx38pagq"; depends=[car ggplot2 lme4 MASS Matrix mgcv plyr reshape2 scales stringr]; }; + ez_combat = derive2 { name="ez.combat"; version="1.0.0"; sha256="1vpycf6gambwg8218wwjc9h3rhsin7qrhh0mpd3r6n9fp03y634f"; depends=[]; }; ezCutoffs = derive2 { name="ezCutoffs"; version="1.0.1"; sha256="04ah9dbfwl89xi0di0dslaf8a39nynxymm8lbacgd88al5dg7y1n"; depends=[doSNOW foreach ggplot2 lavaan moments progress]; }; - ezEDA = derive2 { name="ezEDA"; version="0.1.0"; sha256="1qxifszjfjm1smvl9igpjjjfncb690mim3bwfak5wp0yzjxcrvab"; depends=[dplyr GGally ggplot2 magrittr purrr rlang scales tidyr]; }; - ezcox = derive2 { name="ezcox"; version="0.8.1"; sha256="1l8flbzcs8j4k1hmhzp9dxjwxm65fciz5wxx6wvbnzk9yja5gd44"; depends=[dplyr forestmodel ggplot2 magrittr purrr rlang survival]; }; + ezEDA = derive2 { name="ezEDA"; version="0.1.1"; sha256="1qcgvcjksdajn2rhv52bgqz3n0lnxynjdx4gwhkgsy29ffa0sq2c"; depends=[dplyr GGally ggplot2 magrittr purrr rlang scales tidyr]; }; + ezcox = derive2 { name="ezcox"; version="1.0.0"; sha256="1sgnnvrmw5hhqd2jpqh6b16xix4a5wf0v7xnmhlw4fagy2qa4plj"; depends=[dplyr forestmodel ggplot2 magrittr purrr rlang scales survival tibble]; }; ezec = derive2 { name="ezec"; version="1.0.1"; sha256="0lpx55a8fhy6fqdv3zvzx9mh75q34r71v5kp96hkm9jzl4yvrpd2"; depends=[dplyr drc]; }; ezglm = derive2 { name="ezglm"; version="1.0"; sha256="0x7ffk3ipzbdr9ddqzv0skmpj5zwazkabibhs74faxnld7pcxhps"; depends=[]; }; ezknitr = derive2 { name="ezknitr"; version="0.6"; sha256="060a2175zh1nhzmqgz1mpj2c6721n5w5bv695jj4rbl2s2b2h4qj"; depends=[knitr markdown R_utils]; }; ezmmek = derive2 { name="ezmmek"; version="0.2.4"; sha256="0x62nzs1kayv95a6ldav732v79gahrri2khy1w678rxbzfx5wkqy"; depends=[assertable dplyr ggplot2 magrittr nls2 purrr rlang tidyr]; }; ezpickr = derive2 { name="ezpickr"; version="2.1.0"; sha256="0jcbmd2bsrq8h6z1zmscph5zvv99gj4n2k1ddrl18wj7cx5mzsii"; depends=[haven jsonlite magrittr mboxr purrr readxl rmarkdown stringr textreadr tibble tidyr vroom writexl]; }; - ezplot = derive2 { name="ezplot"; version="0.6.6"; sha256="1mzhf3sp0ynwnzaalip22m0kpjl7g89y9x6lx5bvqw43manxpywy"; depends=[dplyr forcats ggplot2 lubridate rlang tsibble]; }; + ezplot = derive2 { name="ezplot"; version="0.7.2"; sha256="1pvvspml0gqd4l07jj3cqmqqa1if4h3pqmgcys5z0da8wzbjnqnw"; depends=[dplyr forcats ggplot2 lubridate rlang]; }; ezr = derive2 { name="ezr"; version="0.1.5"; sha256="0r4zq0864xpnmczg1zpaasi348j1fllrn0rqfa5fmjh245chcpd4"; depends=[data_table DT ggplot2 ggridges moments shiny shinydashboard weights]; }; ezsim = derive2 { name="ezsim"; version="0.5.5"; sha256="03x75vmf75qsmk4zb09j7xrb11w31rpfwd3dvv12nwjgndh9bnld"; depends=[digest foreach ggplot2 Jmisc plyr reshape]; }; fANCOVA = derive2 { name="fANCOVA"; version="0.6-1"; sha256="04mw0blgpwdk6wdg8llrig43psgc0vb42cbimvzbnym8v503dsn3"; depends=[]; }; @@ -8528,14 +8876,15 @@ in with self; { fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.3"; sha256="0dcfwl0ib87p748hvwscm5ii9fhfarqfl3zqxa8kin2n0hrvkdb6"; depends=[fCertificates fExoticOptions fOptions Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; }; fGarch = derive2 { name="fGarch"; version="3042.83.2"; sha256="06c6f07bg05cbn7s40ak6ywyja4cfbznazj5my9rcyahjvc6b553"; depends=[fastICA fBasics Matrix timeDate timeSeries]; }; - fHMM = derive2 { name="fHMM"; version="0.2.0"; sha256="0jwcdwkkry5fb7swpj20vr08a77svgshkrinsj0xv5sqccqfkp2d"; depends=[MASS progress Rcpp RcppArmadillo tseries]; }; + fHMM = derive2 { name="fHMM"; version="0.3.0"; sha256="1ahlvb85y9m8025id7m0bx90csq07ikwiadfmqh4y95d2milwya0"; depends=[MASS progress Rcpp RcppArmadillo tseries]; }; fICA = derive2 { name="fICA"; version="1.1-1"; sha256="0bnvhpr5w84bb8147gx5jwpz762b462nddgagv9ylhra3wxp44mz"; depends=[JADE Rcpp RcppArmadillo]; }; fImport = derive2 { name="fImport"; version="3042.85"; sha256="0rm4mwhk5ial016vl6dny8s87gd5i9p04akdyg2fndpcqwfmb5lc"; depends=[timeDate timeSeries]; }; + fMRIscrub = derive2 { name="fMRIscrub"; version="0.8.6"; sha256="0ky2a4p06p2c2dgb6wwa4spq4jsn4hvyk8c864c21j8hp6m4yaa9"; depends=[e1071 MASS pesel Rcpp RcppArmadillo robustbase]; }; fMultivar = derive2 { name="fMultivar"; version="3042.80.1"; sha256="0v61sf9x54ymka9x15vz38afj1lxmgfpcwrr73lzhccf6ci6fx9m"; depends=[cubature fBasics mvtnorm sn timeDate timeSeries]; }; fNonlinear = derive2 { name="fNonlinear"; version="3042.79"; sha256="0kwjs7xx4ykw14mw3pff2axrq497jl4g23gbayswb8vrx1qhjibd"; depends=[fBasics timeDate timeSeries]; }; fOptions = derive2 { name="fOptions"; version="3042.86"; sha256="1cqyggb1hb7z0gfgkziynz7nm85z0fn3bvz1iwpy49yy8ll7rfzr"; depends=[fBasics timeDate timeSeries]; }; fPortfolio = derive2 { name="fPortfolio"; version="3042.83.1"; sha256="1knyrjgfzwf4ppvnb5n325p5f6sidr6q53ss0zw8binhj22gli4y"; depends=[fAssets fBasics fCopulae kernlab MASS quadprog Rglpk rneos robustbase Rsolnp slam timeDate timeSeries]; }; - fRLR = derive2 { name="fRLR"; version="1.1"; sha256="005bmljxgvx8v87nz4l3ycg09sahyd34pg8arjz5gdc17d4mjjfc"; depends=[Rcpp]; }; + fRLR = derive2 { name="fRLR"; version="1.2.1"; sha256="1fac5ykl1bv0y8m73vzyhghmj6f0q9iy7zr4142wzh2i2zzr0mpz"; depends=[Rcpp]; }; fRegression = derive2 { name="fRegression"; version="3042.82"; sha256="0pi777xfk101g0r2qpcd0qxqqfnvck3sii990d946ljw6366mamc"; depends=[fBasics lmtest mgcv nnet polspline timeDate timeSeries]; }; fSRM = derive2 { name="fSRM"; version="0.6.5"; sha256="0qp2pcq01vfgaczd57j4wmzvn4srzlwh7ya3sdp7vwzyb8dbjajn"; depends=[foreign ggplot2 gridExtra lavaan plyr reshape2 scales tcltk2]; }; fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; @@ -8543,38 +8892,38 @@ in with self; { fabCI = derive2 { name="fabCI"; version="0.2"; sha256="1vga322xpqzsh40n74v8vqiq8zbzrabvg58mp50bcx2ml0dikgnm"; depends=[MASS]; }; fabMix = derive2 { name="fabMix"; version="5.0"; sha256="1gii3mdii9nw423xxn9mhv1pjbw967wdarn828w04zm9dkdcwm48"; depends=[coda corrplot doParallel foreach ggplot2 label_switching MASS mclust mvtnorm RColorBrewer Rcpp RcppArmadillo]; }; fabisearch = derive2 { name="fabisearch"; version="0.0.2.4"; sha256="0r02wk1nkxv508ac57kqzcw5q569m9n3l9l98jr00h515ni0vjmg"; depends=[NMF reshape2 rgl]; }; - fable = derive2 { name="fable"; version="0.3.0"; sha256="0v22xgld7qqhn50w5n5f1hg3s8dx5y1mb0hn8sr4n3f6kr8izd9b"; depends=[distributional dplyr fabletools Rcpp rlang tibble tidyr tsibble]; }; + fable = derive2 { name="fable"; version="0.3.1"; sha256="185l3gd83nys11k389ha2ssdm9rkw9aackmz2cd2mvlym72rsnq7"; depends=[distributional dplyr fabletools Rcpp rlang tibble tidyr tsibble]; }; fable_prophet = derive2 { name="fable.prophet"; version="0.1.0"; sha256="12y2k05plg6d6lgqk6617q6z5m6xz33zdsjh56k86h230qqw68rp"; depends=[distributional dplyr fabletools lubridate prophet Rcpp rlang tsibble]; }; fabletools = derive2 { name="fabletools"; version="0.3.1"; sha256="0r2ik8p89w8r76v9iliqng2ysf9cqqdcmq89ilr8ccilfq3pgbks"; depends=[distributional dplyr generics ggplot2 lifecycle progressr R6 rlang tibble tidyr tidyselect tsibble vctrs]; }; fabricatr = derive2 { name="fabricatr"; version="0.14.0"; sha256="1smy9c34y47xdfmkgm90xyxagnj9qsgxg70mf75z1006m4npbdg8"; depends=[rlang]; }; fabricerin = derive2 { name="fabricerin"; version="0.1.2"; sha256="0ynvnxzxx1iybyy5pvwfsj5y9jjixyrpji9vcl5fq5mjnpg8mpqk"; depends=[glue htmltools]; }; - face = derive2 { name="face"; version="0.1-5"; sha256="0n7vlq29krsdcp8r32irhvf7xbcxy5g7663qncmbhj5x45sviqh6"; depends=[Matrix matrixcalc mgcv]; }; + face = derive2 { name="face"; version="0.1-6"; sha256="0lvagpn6sa22zj4phz1vi1ccd8xasrgcq6ypwj7qx4bf1xjc95b1"; depends=[Matrix matrixcalc mgcv]; }; facerec = derive2 { name="facerec"; version="0.1.0"; sha256="1dipcnxjz6yd34w0jrrvj5p0pwdgz1l5m9zvri7mflnz7g34gmaj"; depends=[dplyr httr jsonlite knitr magrittr rlang snakecase stringr]; }; facilitation = derive2 { name="facilitation"; version="0.5.2"; sha256="0gyqa3njyynvdhfziq33xqc7cjhszii67mk8809ncvh6abkdx1hw"; depends=[animation Matrix Rcpp]; }; + factiv = derive2 { name="factiv"; version="0.1.0"; sha256="1m43kg8mrlnkzs667s4a8c2jkfdgv2pjbwf45vf2w4nlp84camxx"; depends=[Formula generics]; }; factoextra = derive2 { name="factoextra"; version="1.0.7"; sha256="1allvdjhd3pq8xz30b1cymwcik5iaahghrjrlnn54cwkfhfg0kv2"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; }; factoptd = derive2 { name="factoptd"; version="1.0.3"; sha256="1ir50im3kr1xhqk4qwrm2h5fq9gqgrwshbamvjlf8n1wnn03mcb6"; depends=[MASS partitions]; }; - factor_switching = derive2 { name="factor.switching"; version="1.1"; sha256="126f7939xq3g27yfalp85ivwfpk93fs8gcig037z42i0xsywh9kp"; depends=[coda HDInterval lpSolve]; }; + factor_switching = derive2 { name="factor.switching"; version="1.2"; sha256="1va8xah0r7622svybv9r2v0s9wbl15p4lkrbqmaf5p5izijg32xs"; depends=[coda HDInterval lpSolve MCMCpack]; }; factorEx = derive2 { name="factorEx"; version="1.0.1"; sha256="03dgxxykxgq63cgan5gy5vz4hnwqmg48z2wdv8f69mk9452mg9m2"; depends=[arm doParallel estimatr foreach genlasso igraph mvtnorm pbapply pbmcapply prodlim sandwich stringr]; }; factorMerger = derive2 { name="factorMerger"; version="0.4.0"; sha256="127k5h1gbbnjr6gxgck2n9glvvwkd69xq7n6gzmrq8gszk8v1x5m"; depends=[agricolae colorRamps dplyr forcats formula_tools ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; }; factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; }; - factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; factorial2x2 = derive2 { name="factorial2x2"; version="0.2.0"; sha256="045887hwknwm92wlrp0jlvxj5aal50vpnc7ddbh7c8smawmrdwfd"; depends=[mvtnorm survival]; }; + factormodel = derive2 { name="factormodel"; version="1.0"; sha256="0yvp8mk42hi1vhrw29djabndc8pbbpjbr6bwss95wsmk7zvvf6i2"; depends=[dplyr gtools nnet pracma]; }; factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; factorstochvol = derive2 { name="factorstochvol"; version="0.10.2"; sha256="155vnlsncykazg5ll1sdsk6y3342qvyhfxw7mxnhgc134ngqcn8m"; depends=[corrplot GIGrvg Rcpp RcppArmadillo stochvol]; }; factory = derive2 { name="factory"; version="0.1.0"; sha256="1715bx2rn8kk5qd196jnrv5f95l54n4y0aqqdzfkgrmqihcy8ahx"; depends=[purrr rlang]; }; factset_analyticsapi_engines = derive2 { name="factset.analyticsapi.engines"; version="3.0.1"; sha256="0v96z837dii1q7mbpd48zwpl2qjzqnhignb80g0xkc4iygsnrrms"; depends=[caTools httr jsonlite R6 rlang]; }; - factset_protobuf_stach = derive2 { name="factset.protobuf.stach"; version="1.0.2"; sha256="0qdvgq0w58pb0bn4x5v25i8pvij3lc8l9x9bj68s9zb29ankl3ss"; depends=[R6 RProtoBuf]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; fad = derive2 { name="fad"; version="0.3-3"; sha256="1xii15lcfb72jmwgqfb4x0h0xs7cxj1hzx8289sq1ibakiwkkv5l"; depends=[Matrix Rcpp RcppEigen RSpectra]; }; fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; - fairadapt = derive2 { name="fairadapt"; version="0.1.0"; sha256="01ing7mm1asfgh4w8cc7f7fpv13lja97vv5skk5bri00zycwcqfd"; depends=[ranger]; }; - fairml = derive2 { name="fairml"; version="0.4"; sha256="04bx34vgafc43hw9f0n0qg924c3y8ik0crh7k1fqyanff393b5qb"; depends=[glmnet optiSolve]; }; - fairmodels = derive2 { name="fairmodels"; version="1.0.1"; sha256="13w459b71vwkgl1sbhgflb2s26qqbkzbar1msxabmb36l28la120"; depends=[DALEX ggdendro ggplot2 ggrepel patchwork scales]; }; + fairadapt = derive2 { name="fairadapt"; version="0.2.0"; sha256="1ngn4c03nbs28p0r9dbfzi5fqn4cxbl72v5pgbmbi1wvp0bsvla8"; depends=[assertthat cowplot ggplot2 igraph qrnn quantreg ranger scales]; }; + fairml = derive2 { name="fairml"; version="0.6"; sha256="0fzzk2gip46q24n71b8irwcsg38bgah7i56djfvpqa8ki43syqj7"; depends=[CVXR glmnet optiSolve]; }; + fairmodels = derive2 { name="fairmodels"; version="1.1.0"; sha256="0vyykmyahv45krnj719rqr1nh12jd2pjrh39n2qmx0rg6wpr2i0n"; depends=[DALEX ggdendro ggplot2 ggrepel patchwork scales]; }; fairness = derive2 { name="fairness"; version="1.2.2"; sha256="12jf2p8gmj5d6r9h9cwy208qwyqi606b54v0d99vpr171yijqvqk"; depends=[caret devtools e1071 ggplot2 pROC]; }; fairsubset = derive2 { name="fairsubset"; version="1.0"; sha256="0iw16fs2mb9p14vr34izw3sirbndyy8w07df3scy7gkkcx2nz2bz"; depends=[matrixStats]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.10.1"; sha256="1wpslll9gr3q50410ydfg10s0xp06j69xhj88gw7fsvdnqgs9h3l"; depends=[fritools igraph MakefileR]; }; + fakemake = derive2 { name="fakemake"; version="1.10.3"; sha256="027bzqp1knari0a0v9pljzvjsvf0lcgxi4w25lq482b9a1gs36fm"; depends=[fritools igraph MakefileR]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam_recrisk = derive2 { name="fam.recrisk"; version="0.1"; sha256="1lyrq7bq7p7ijc2vf545nazw4akncz08548ya1dv3lsc5jmkgfzj"; depends=[]; }; @@ -8584,15 +8933,17 @@ in with self; { fanc = derive2 { name="fanc"; version="2.2"; sha256="1gdkxb2ay0lyldjpg4s2fbavjxl4q1bf9q438csqa4vzl5ywv2w8"; depends=[Matrix]; }; fancycut = derive2 { name="fancycut"; version="0.1.2"; sha256="1xg5qjxf77g10h07x6rvb8c3klc9gbr77bkw352qpas268pkswl2"; depends=[]; }; fanovaGraph = derive2 { name="fanovaGraph"; version="1.5"; sha256="1hffda52yk24slbgsfdgkpg3vsryfnhlw09r39cbyz483i7xd8d0"; depends=[DiceKriging igraph sensitivity]; }; - fanplot = derive2 { name="fanplot"; version="3.4.2"; sha256="169n9ghm4x6fhd97xz1mqjj0f5hldjkrp926iqk2qqanchnhfvh6"; depends=[]; }; - fansi = derive2 { name="fansi"; version="0.4.2"; sha256="0i7wmaflkjzdbggqv31wnsj3m9imvc6db429vyjk64xrz1ng1vd2"; depends=[]; }; + fanplot = derive2 { name="fanplot"; version="4.0.0"; sha256="08zd2af26ah1rdkzxi1sv4c4l06jpxd6m38q3xy657k2jm90rkkc"; depends=[]; }; + fansi = derive2 { name="fansi"; version="0.5.0"; sha256="0kx5kjhr8dvqz1mq1zkijkgp29jv8b0irm1xplx1d74n2v1zh6wx"; depends=[]; }; faoutlier = derive2 { name="faoutlier"; version="0.7.6"; sha256="0dd8k5s0yv047p10jisqz13nflby4y0dg97r0nbjygzcq1ryx2bs"; depends=[lattice lavaan MASS mirt mvtnorm pbapply sem]; }; faq = derive2 { name="faq"; version="0.1.1"; sha256="0knajqm9ydsjhn6xymfrcyf2b1kgfbiai8ai2zlm7p4mgfry504h"; depends=[htmlwidgets jsonlite]; }; far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; - farff = derive2 { name="farff"; version="1.1"; sha256="0d3d343jjjwsb132ph12h3r044j3bc4jp94ayikjyq1lmwwsfr4k"; depends=[BBmisc checkmate readr stringi]; }; + farff = derive2 { name="farff"; version="1.1.1"; sha256="1hniqhc4mdnaq8bmpj2fmb6iwgys0al1kvcdiq08pmgj6hhzzjr3"; depends=[BBmisc checkmate readr stringi]; }; farrell = derive2 { name="farrell"; version="0.2.1"; sha256="0i546w5p40j9wqiq7qvbxw0426msavbdpnh258jcg6bagc6bywh8"; depends=[Benchmarking data_table dplyr DT magrittr miniUI readr rlang shiny shinycssloaders shinyWidgets tibble]; }; farver = derive2 { name="farver"; version="2.1.0"; sha256="1x6ffwxqbrwlylnk995jz2a6nz2y9z59jaq0ncpni7q40w367j75"; depends=[]; }; + fasano_franceschini_test = derive2 { name="fasano.franceschini.test"; version="1.1.0"; sha256="122jpjis2jsd13ljjhi6ibgp1i4gg9yymkzh1rpcysj1wsxxasad"; depends=[]; }; + fasi = derive2 { name="fasi"; version="1.0.0"; sha256="1hfd6nl8zvn7sybji8s1pa2wl95l2vqa07rv96yn9rk07qvdc6dy"; depends=[fastAdaboost gam naivebayes]; }; fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; }; fasstr = derive2 { name="fasstr"; version="0.3.2"; sha256="0krd6h9vz4y3kzz13w2lq5b59v6ajr61ngcpnnk71ijn7hhmaanh"; depends=[dplyr e1071 fitdistrplus ggplot2 lubridate openxlsx PearsonDS plyr purrr RcppRoll scales tidyhydat tidyr zyp]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; @@ -8600,20 +8951,22 @@ in with self; { fastGHQuad = derive2 { name="fastGHQuad"; version="1.0"; sha256="1rjia8wggadr9xwxcmzmal0rc4g6pa3dr5888fbbnb6abl8b2lrj"; depends=[Rcpp]; }; fastGraph = derive2 { name="fastGraph"; version="2.1"; sha256="0lz199607hqpwxzhff4jzhmjq6cbakd335iyclmlscllgfzgnhql"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; - fastICA = derive2 { name="fastICA"; version="1.2-2"; sha256="1zpijqcipm0aa3rxj0mys06lskqy4dbppjpxr1aby0j16y9ka8ij"; depends=[]; }; + fastICA = derive2 { name="fastICA"; version="1.2-3"; sha256="0l49cmxm1n4dzrv8q3q3mq4drcjgby4f1dmpwfdb8jxn9ij85vz9"; depends=[]; }; fastJT = derive2 { name="fastJT"; version="1.0.6"; sha256="1vw9x00gslqgjfz55a60kizz8y02jifgf3fw7dv9lxm207vd2wxq"; depends=[Rcpp]; }; + fastLaplace = derive2 { name="fastLaplace"; version="0.0.2"; sha256="172irl97sxkc5m1rk2kxxl8hkb1yf0029k9szkw9qyz0ki8d657w"; depends=[bbmle fields RSpectra]; }; fastLink = derive2 { name="fastLink"; version="0.6.0"; sha256="0xysif0v7l7iwnwpf5ydk7ns9azsgja5sm672wxybfqwrh6nx9xk"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; }; fastM = derive2 { name="fastM"; version="0.0-4"; sha256="1n9a431w0hl4kr3pa32kcyd1d73acz4vb9vhfkckk3099mg46d9m"; depends=[Rcpp RcppArmadillo]; }; fastNaiveBayes = derive2 { name="fastNaiveBayes"; version="2.2.1"; sha256="04hv4jdhan1vbsixzbifa7hpmc531gv7c2dd1fx5700c2wlkja1n"; depends=[Matrix]; }; + fastOnlineCpt = derive2 { name="fastOnlineCpt"; version="1.0"; sha256="0grkgj8kwqblikgw5pg4vdp41qd9s4cd7dzih3ima31fdw8ssi3c"; depends=[Rdpack]; }; fastR2 = derive2 { name="fastR2"; version="1.2.1"; sha256="15mqsdy79zvd4srrszdjp0kh9lfcq3yxp7j5d4xcqbjbwsgy68il"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; fastRG = derive2 { name="fastRG"; version="0.3.0"; sha256="1qxbdgn9id9dhavlwf242cr9pk7pwaj93cvv00jaidiq6rlslnq8"; depends=[ellipsis glue igraph magrittr Matrix RSpectra tibble tidygraph]; }; fastSOM = derive2 { name="fastSOM"; version="1.0.1"; sha256="1fzy7lfx1fn9993h0qh6vbwq0w4gfgbdrprmzb1z3aqq6nqvmngm"; depends=[]; }; - fastStat = derive2 { name="fastStat"; version="1.4"; sha256="1sgk41v07rjh6dq52mxbiryjcwmyl71cmm51r8gwf8k14zgl500s"; depends=[car do e1071 ggplot2 ggrepel plyr PredictABEL reshape2 set survC1 survIDINRI survival tseries]; }; + fastText = derive2 { name="fastText"; version="1.0.1"; sha256="0l0pkr3a8qckvzazh6rsz94rab8v96y4wis2my29srkwv4h447bn"; depends=[data_table ggplot2 glue Rcpp]; }; fastTextR = derive2 { name="fastTextR"; version="2.0.0"; sha256="1ggmwsw2qnq8v3s8iaxi8q66c898pc15wfgpsp6h0mc761qih5lf"; depends=[Rcpp slam]; }; fasta = derive2 { name="fasta"; version="0.1.0"; sha256="0wnppxn3039dj58xm0b66fsyq537bk8k8m56im11xj1iwc3zc6vw"; depends=[]; }; - fastai = derive2 { name="fastai"; version="2.0.7"; sha256="0jd6q140hrxk0c0k4flm38b1q33n1mrwc24mgn5xpn83bpk8d0wm"; depends=[generics ggplot2 ggpubr glue png reticulate]; }; + fastai = derive2 { name="fastai"; version="2.0.9"; sha256="10s7zp9g7fypgqablzxrfpxz7hnic41fvvmj1w9lx0yp5g26pb9k"; depends=[generics ggplot2 ggpubr glue png reticulate]; }; fastclime = derive2 { name="fastclime"; version="1.4.1"; sha256="0zcir8r11b2hxr9vvkmvxlzmhfcaxbr0wbjy86ysr912mp8fs9i3"; depends=[igraph lattice MASS Matrix]; }; - fastcluster = derive2 { name="fastcluster"; version="1.1.25"; sha256="01a2xnhhvv1swd4g8p4lzyn7ww7kg49jlnzc7kfz60jqjzpisrpk"; depends=[]; }; + fastcluster = derive2 { name="fastcluster"; version="1.2.3"; sha256="009amz7i5yndqw2008fgd3p11n4fsb291k2ypg3pip6dw4lr28hz"; depends=[]; }; fastcmh = derive2 { name="fastcmh"; version="0.2.7"; sha256="0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl"; depends=[bindata Rcpp]; }; fastcmprsk = derive2 { name="fastcmprsk"; version="1.1.1"; sha256="00jpmmlpldrqamgw7q7gx6s4rl1bxqlzw2jglw36k5zawcdb69y6"; depends=[dynpred foreach survival]; }; fastcox = derive2 { name="fastcox"; version="1.1.3"; sha256="0jn19v6mkwgyz8x63xrfgkgnf0f2rq338r5qkhz690mdzr4c47a3"; depends=[Matrix]; }; @@ -8627,18 +8980,20 @@ in with self; { fastlogranktest = derive2 { name="fastlogranktest"; version="0.2.1"; sha256="1j5mgvi3nwnlarj31cknx2cikypql370qds2h0877vmm80942z25"; depends=[BH Rcpp]; }; fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; fastmap = derive2 { name="fastmap"; version="1.1.0"; sha256="0aw29hnq3ppn7bsnwg9d9sp84k1cvq30lrmfzqn315n0nhkfa4wi"; depends=[]; }; - fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; - fastmatrix = derive2 { name="fastmatrix"; version="0.3-81"; sha256="0gcnssxfxhj8pvv5ydaszing3bm1cjhajzr28j7xsf8qndgs9kkw"; depends=[]; }; + fastmatch = derive2 { name="fastmatch"; version="1.1-3"; sha256="0qcq1gwl9pijgp34giyq5y9rk0ly3d7xza2b7r68xx63ifqa1vqx"; depends=[]; }; + fastmatrix = derive2 { name="fastmatrix"; version="0.3-819"; sha256="1xar1vv65vy2gh2gj23r8k580bgaqgbwggd6cib3pvc98s0ckgbm"; depends=[]; }; fastmit = derive2 { name="fastmit"; version="0.1.1"; sha256="13hczsfbzssd272kpbq8l2l64lqrkmi2j6f3xyp9jvvxdd506kq0"; depends=[Rcpp RcppArmadillo]; }; fastnet = derive2 { name="fastnet"; version="1.0.0"; sha256="1c07msypxj8ilpa1il9jjbgylwpdxv8j8gak362xdmbm4b1bwlm6"; depends=[doParallel foreach igraph tidygraph]; }; fastpos = derive2 { name="fastpos"; version="0.4.1"; sha256="0h6drzzc3f1dc5ydi5x9c7wday18sgzi8zn4pf5wxlzsc4qj0pzf"; depends=[future MASS plyr Rcpp RcppArmadillo RcppProgress]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.2"; sha256="12x3lkg5zc4ckyg4x3xxqb779yhrr0fys7asf5b8shz49f86fmm9"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; + fastqq = derive2 { name="fastqq"; version="0.1.2"; sha256="1p5xjwcwsgxyva6y6g9d0m6pvdwih97rassw6n2a85dsl8c4kmfk"; depends=[Rcpp]; }; fastrmodels = derive2 { name="fastrmodels"; version="1.0.2"; sha256="1333546nk429l6s4icbmx8hmh29wsc252wbmmhsmgb116l4ra9zi"; depends=[xgboost]; }; fastshap = derive2 { name="fastshap"; version="0.0.5"; sha256="08f25ib5mry6h8lvj0g3clc9kfl5g2wdd8x8bw455wwmbcm6x5vg"; depends=[abind ggplot2 gridExtra matrixStats plyr Rcpp RcppArmadillo tibble]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; + fastverse = derive2 { name="fastverse"; version="0.2.1"; sha256="0ys75qw5ag7mynwk4xyjb8jlsgbffqjxn2h1dznxzhsa953v39xk"; depends=[collapse data_table fst kit magrittr matrixStats]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.4"; sha256="01a9d6b2f6g858vg64kr0w0qmv2jqhk9kk3hb6jdr2rly4j8p14x"; depends=[kinship2 multgee]; }; - faux = derive2 { name="faux"; version="1.0.0"; sha256="0wfz48bv31fwqnz7bvpimsl7ydym76mkn5z2zx1yf55cl95z27n3"; depends=[dplyr ggplot2 jsonlite lme4 rlang truncnorm]; }; + faux = derive2 { name="faux"; version="1.1.0"; sha256="0cmgsm8c8w5d5zk00j4872x7fby0rdi7lmw0w0ncahlnh72grpjm"; depends=[dplyr ggplot2 jsonlite lme4 rlang truncnorm]; }; fauxnaif = derive2 { name="fauxnaif"; version="0.6.1"; sha256="1hw6lkxvxd65wajr0mpmbg8lvx0sd84py1apzqfnr7xpb4r1hi85"; depends=[glue lifecycle rlang]; }; fauxpas = derive2 { name="fauxpas"; version="0.5.0"; sha256="129fzqb7wsskbn50s8x0marr4wm8jrns6hiycqcsk166k3dnyyy8"; depends=[httpcode R6 whisker]; }; faviconPlease = derive2 { name="faviconPlease"; version="0.1.1"; sha256="1si4s2cllia8hdlwdxjzbb2vi3n08dr76vm2mnsvqkvd3p9m60pr"; depends=[xml2]; }; @@ -8650,7 +9005,7 @@ in with self; { fbroc = derive2 { name="fbroc"; version="0.4.1"; sha256="1v73wl3yckcqx43fz1lzcsy6v08vmbmi7yi623yhgqywixxv2bx3"; depends=[ggplot2 Rcpp]; }; fbst = derive2 { name="fbst"; version="1.5"; sha256="05dnnwbqsj1rjka8p3mjhzj5h11ac8cvqg51qc8fdssqx2ldcqdw"; depends=[bayestestR]; }; fc = derive2 { name="fc"; version="0.1.0"; sha256="0x41xfchy499kz0qi7fp12vpkbcddprv19mmk48lxzavv4f5avfh"; depends=[codetools]; }; - fcaR = derive2 { name="fcaR"; version="1.0.7"; sha256="0hvwd8gpx7akci96c78cw8v4qlh46zabbcxv9bl5dlgp5spxppng"; depends=[fractional magrittr Matrix R6 Rcpp registry stringr tictoc tikzDevice]; }; + fcaR = derive2 { name="fcaR"; version="1.1.1"; sha256="1jhhjsgw3vsgrz5mv961m61y39cs5zpi0m82yf38r6ngrjy52cqg"; depends=[forcats fractional magrittr Matrix purrr R6 Rcpp registry settings stringr tibble tikzDevice]; }; fcci = derive2 { name="fcci"; version="1.0.0"; sha256="1rz46dbh11i8ycxhdjhjqhb65f25qyb0ip7lgrcwkc6bidg7kc5d"; depends=[assertthat Rcpp rlang]; }; fcd = derive2 { name="fcd"; version="0.1"; sha256="091wbf5iskcgyr7jv58wrf590qijb0qcpninmvm3xrwxi34r37xr"; depends=[combinat glmnet MASS]; }; fclust = derive2 { name="fclust"; version="2.1.1"; sha256="11dsf7mb075m1m1ilqsacc0s4907wq6alvdfh6nizsyr01wiqw3b"; depends=[MASS Rcpp RcppArmadillo]; }; @@ -8665,25 +9020,26 @@ in with self; { fdaACF = derive2 { name="fdaACF"; version="1.0.0"; sha256="0qrsj25p6h2xg25v0ayk8x31d4whyy0mpf2xdpw3hcwhb71mbfhn"; depends=[CompQuadForm fda pracma vars]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.6"; sha256="0hyhb67qvvhyq68k5h4ffvsl4lmw66nfy5l14kwxnn42h3b810sc"; depends=[Formula Rcpp RcppArmadillo]; }; fdaPDE = derive2 { name="fdaPDE"; version="1.0-9"; sha256="06hm1f30rpy37xz9ybvhk759y10p8ijy7slnl9cvp4gqwzy2i8b7"; depends=[geometry Matrix plot3D plot3Drgl RcppEigen rgl]; }; - fdaPOIFD = derive2 { name="fdaPOIFD"; version="1.0.0"; sha256="11zlwp7xwdac4chk3f81idh5xz9lfqs3vx6qk56yb2lp8cjd7rad"; depends=[FastGP fdapace ggplot2 magrittr MASS patchwork reshape2 tibble]; }; + fdaPOIFD = derive2 { name="fdaPOIFD"; version="1.0.2"; sha256="0rs61ja58mxpadfgkvdjq14rgaikcga0alc5a1afnrjx4djswl1k"; depends=[FastGP fdapace ggplot2 magrittr MASS patchwork reshape2 tibble]; }; fdadensity = derive2 { name="fdadensity"; version="0.1.2"; sha256="1i2xzchlsixgjzyfmbv547sy6mq90xrnyc2kpd11wwfgfrpj1ix3"; depends=[fdapace Rcpp]; }; fdakma = derive2 { name="fdakma"; version="1.2.1"; sha256="0j9qgblrl7v4586dd6v0hjicli6jh8pkk5lzn8afpl75xfs24six"; depends=[]; }; fdaoutlier = derive2 { name="fdaoutlier"; version="0.2.0"; sha256="1jpd9mszd0grn7rwi3dmgl6l5dggwsnz1kyljz2gcfm2wck2zhbz"; depends=[MASS]; }; - fdapace = derive2 { name="fdapace"; version="0.5.6"; sha256="05xlxj1jy3hzlc6djwwv3j6999f867y4zy3cd6mf9gnzgr0pjbqx"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; - fdasrvf = derive2 { name="fdasrvf"; version="1.9.4"; sha256="0psqxmznb2qimci2g8p0qy5fc5mal8gilwbmshlmb57ws71c3pkc"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; + fdapace = derive2 { name="fdapace"; version="0.5.7"; sha256="0mmdfp27a7j0hvziir8b2dybifrkahhcinnqf84xa8pp24w0v7mv"; depends=[Hmisc MASS Matrix numDeriv pracma Rcpp RcppEigen]; }; + fdapaceShiny = derive2 { name="fdapaceShiny"; version="1.0.0"; sha256="1vf2xiqqkgpg4a9py7m4d9mq0ilrz2rdz713wcspfskqkc8n17jh"; depends=[attempt bs4Dash config data_table dplyr DT fdapace ggplot2 glue golem htmltools magrittr pkgload plotly processx purrr reshape2 shiny shinyjs shinyWidgets stringr thinkr tidyr]; }; + fdasrvf = derive2 { name="fdasrvf"; version="1.9.7"; sha256="06kq9rlszydr55sg17yybwa89qd4d1826jyw4kmx4aligx7ycqq6"; depends=[coda doParallel fields foreach lpSolve Matrix matrixcalc mvtnorm Rcpp RcppArmadillo testthat tolerance viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; - fddm = derive2 { name="fddm"; version="0.3-3"; sha256="09fyk9h3gv10bp8xg45pmv0yr57vh1iq2hbadhlz946iqn7qmvpa"; depends=[Rcpp]; }; + fddm = derive2 { name="fddm"; version="0.4-0"; sha256="04fccbgplx4gv4qcmkxps7nhfl477ga7ljdv9ff3fmmp27p7w5iq"; depends=[Rcpp]; }; fdistr = derive2 { name="fdistr"; version="0.1.0"; sha256="1i9nq4jmszbmwk4m6jfn7rifsn7aay40cj6kz23b9ihj3phqffi8"; depends=[dplyr ggplot2 magrittr usethis]; }; fdm2id = derive2 { name="fdm2id"; version="0.9.5"; sha256="0z4csd2bi0pavfaqvkidfdvri14miwh1v752m6f1h224j47krcq8"; depends=[arules car caret class cluster e1071 FactoMineR flexclust fpc glmnet ibr irr kohonen leaps MASS mclust mda meanShiftR nnet pls questionr randomForest ROCR rpart Rtsne SnowballC stopwords text2vec wordcloud xgboost]; }; fdq = derive2 { name="fdq"; version="0.12"; sha256="198nsyzv0ni2mjx12wik58c7z5vrc1mfk80k3iv94dz1iq9fprqf"; depends=[data_table Fgmutils ggplot2 randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.4"; sha256="1lwznpwfnhhv0h7qwy9jc7li752bq7hgmkh86qzyqz7k18zgx4iw"; depends=[MCMCpack qvalue]; }; - fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; + fdrci = derive2 { name="fdrci"; version="2.2"; sha256="0q5m7h6zfbwv2ab8ab6p4d8y8ib24ryvmngyk564589dl2fwrn6q"; depends=[ggplot2]; }; fdrtool = derive2 { name="fdrtool"; version="1.2.16"; sha256="1aap4k1l3a9m43374xq688mqnzkgqx8l021li262r3h1xr4adpp7"; depends=[]; }; fds = derive2 { name="fds"; version="1.8"; sha256="1284vncixrzrz9x6b52gslrbrbia07sd0xac7nwdqhp5f5v5wfi0"; depends=[rainbow RCurl]; }; fdth = derive2 { name="fdth"; version="1.2-5"; sha256="01phrn8x245kplljjajqlsma7847j058spbxajnklamywf002qzr"; depends=[xtable]; }; feamiR = derive2 { name="feamiR"; version="0.1.0"; sha256="0yp3bxh47aspfnnxi4wm4drkndv265rv58n9x9cp5jazwdy4qgg9"; depends=[dplyr e1071 GA ggplot2 magrittr randomForest reticulate rpart rpart_plot stringr tibble]; }; - feasts = derive2 { name="feasts"; version="0.2.1"; sha256="05ix5anp1swkcarx85pdn994fl3ngn9wkn3idpy69hgxcwzr3na4"; depends=[dplyr fabletools ggplot2 lifecycle lubridate rlang scales slider tibble tidyr tsibble vctrs]; }; + feasts = derive2 { name="feasts"; version="0.2.2"; sha256="1ffmm0fsm366fiiai3r2s3md96f6h5lyzc0qxdfv0b7sqavh2m09"; depends=[dplyr fabletools ggplot2 lifecycle lubridate rlang scales slider tibble tidyr tsibble vctrs]; }; feather = derive2 { name="feather"; version="0.3.5"; sha256="1gxd0h2m56sjjlzn4dry6s13nddxc4l5i11gsvavaf2dwbahdzsh"; depends=[hms Rcpp tibble]; }; feature = derive2 { name="feature"; version="1.2.15"; sha256="0yzn1w1sasilcp8v0pcjnxjv9l6lspkskqi412i6h040gqmjjf6y"; depends=[ks plot3D]; }; featureCorMatrix = derive2 { name="featureCorMatrix"; version="0.4.0"; sha256="1gq3g351z3fbrx6ys28iymv9j07p2siav8jr3k07r06w314dk1q6"; depends=[]; }; @@ -8695,7 +9051,9 @@ in with self; { fec16 = derive2 { name="fec16"; version="0.1.3"; sha256="0azvrg98li535mqa2awhmfisfyfr4d8dw0ynikxmp0z1w9l3dx1p"; depends=[dplyr readr vroom]; }; fechner = derive2 { name="fechner"; version="1.0-3"; sha256="0bassigcipwlr2g8cdjh8jyhmb903k3hla9gnigcbz7qwzlfwa86"; depends=[]; }; federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; + fedmatch = derive2 { name="fedmatch"; version="2.0.3"; sha256="1kxj0468sr3wv7byhviqz6cwn25sz41lrwhd168j1x6csjiakxgc"; depends=[BH data_table forcats magrittr purrr Rcpp scales SnowballC stringdist stringr]; }; fedregs = derive2 { name="fedregs"; version="1.0.0"; sha256="171j6r6qxnx9gk9x9gpdyh51ssrgmf7sczc4889qr3qqw15sm4bn"; depends=[dplyr httr magrittr purrr rvest stringi tidyr tidytext xml2]; }; + fedstatAPIr = derive2 { name="fedstatAPIr"; version="0.1"; sha256="0ll86fp9kaddacsy9jfnwrq353kx4gny8vmxg8vnfx9kcl3bv95z"; depends=[dplyr httr jsonlite magrittr readsdmx rlang rsdmx rvest stringr xml2]; }; feedeR = derive2 { name="feedeR"; version="0.0.10"; sha256="1p64c7ibwn6k5k3vsjxrcjr84czild7g8bqw0yv4axk52vk5jfkx"; depends=[digest dplyr lubridate readr stringr tibble xml2]; }; feisr = derive2 { name="feisr"; version="1.2.0"; sha256="012rspsw1xwl11gdr3nlpdmf24y9d2shwj81iqj1xill3l0mchwc"; depends=[aod dplyr Formula plm Rdpack]; }; fellov = derive2 { name="fellov"; version="0.1"; sha256="0z4b08ykajzwa5852dknqz5qqlmhklbwdq8x5zhyfmwba5zfbjav"; depends=[]; }; @@ -8708,7 +9066,9 @@ in with self; { ffbase = derive2 { name="ffbase"; version="0.13.3"; sha256="1dp6lblfq2j7r1b4b8ls47jlx8j27n88d5vp8w116lb8pa01zxmk"; depends=[bit fastmatch ff]; }; ffmanova = derive2 { name="ffmanova"; version="1.1.0"; sha256="0019m9vxnh5yxr5k7zflzyhd533a842cjjkcpqyannshnrbfndvy"; depends=[]; }; ffmetadata = derive2 { name="ffmetadata"; version="1.0.0"; sha256="0gjv5fl3p0kz28c91l4qf34a2685a24l5841ixdg7wivfs5v9npv"; depends=[httr jsonlite]; }; - ffscrapr = derive2 { name="ffscrapr"; version="1.4.1"; sha256="1ccvfxg2hpgshpq8c6425x20j7zwc1w01cs7lfclkbdzhvdwaad5"; depends=[cachem checkmate dplyr glue httr jsonlite lifecycle lubridate magrittr memoise purrr rappdirs ratelimitr rlang stringr tibble tidyr]; }; + ffp = derive2 { name="ffp"; version="0.1.0"; sha256="11c25lcy5fzchc00cv7r9g92gnb6iffmcylibs1w42245r69bsnh"; depends=[assertthat dplyr forcats ggdist ggplot2 lubridate magrittr mvtnorm NlcOptim pracma purrr rlang scales tibble tidyr usethis vctrs xts]; }; + ffscrapr = derive2 { name="ffscrapr"; version="1.4.6"; sha256="02radzd5bcavbhgy842bgxbp33db87sxpqvxnff46kz6v6xbw7wm"; depends=[cachem checkmate dplyr glue httr jsonlite lifecycle lubridate magrittr memoise nflreadr purrr rappdirs ratelimitr rlang stringr tibble tidyr]; }; + ffsimulator = derive2 { name="ffsimulator"; version="1.1.0"; sha256="0mzas3hx6nj2q2lidkmrnh3mfz8w0s9r58j7vy39sfaq8h9qqyly"; depends=[checkmate cli data_table ffscrapr glue magrittr nflreadr Rglpk rlang tidytable]; }; ffstream = derive2 { name="ffstream"; version="0.1.6"; sha256="036ikhah4y85khgfmvxwsn3vavvw1is8i9k2lw474wxlh4cxa3kd"; depends=[Rcpp]; }; fftw = derive2 { name="fftw"; version="1.0-6"; sha256="1kkhn79x3akp2v28aqmif0dd2fn1pw145fjgyy29i4ab6pngazir"; depends=[]; }; fftwtools = derive2 { name="fftwtools"; version="0.9-11"; sha256="0zrchp4l0jdbir2gibjf00x225y9giqk80zvqmr2yyvc12lwkw7i"; depends=[]; }; @@ -8717,19 +9077,23 @@ in with self; { fgeo = derive2 { name="fgeo"; version="1.1.4"; sha256="0axglmk05li3plb79rccskhddjzq3pdx3mgxr8yqysymf1nscrq6"; depends=[cli crayon dplyr fgeo_analyze fgeo_plot fgeo_tool fgeo_x glue magrittr purrr rlang rstudioapi]; }; fgeo_analyze = derive2 { name="fgeo.analyze"; version="1.1.14"; sha256="0pnmvq6imnffvr4qlmygmmw18g33s81f5jrrs7n4ahwi0qmf5qaj"; depends=[dplyr fgeo_tool glue lubridate magrittr MASS purrr rlang tibble tidyr withr]; }; fgeo_plot = derive2 { name="fgeo.plot"; version="1.1.10"; sha256="0lg74ckdm3nn91526cg6gly3lpsv315n2kfmf4bsmprj8k0zj31s"; depends=[dplyr fgeo_tool ggplot2 ggrepel glue magrittr purrr rlang stringr]; }; - fgeo_tool = derive2 { name="fgeo.tool"; version="1.2.6"; sha256="0di1alxmxh47akbhy75b7vpix674xg4iynac4ga859nia56fisz1"; depends=[dplyr glue magrittr purrr readr rlang tibble tidyselect]; }; + fgeo_tool = derive2 { name="fgeo.tool"; version="1.2.7"; sha256="1272zaa78s6ypfavhf6fy0fl23i71w4s549bpkb94rvalg2026ak"; depends=[dplyr glue magrittr purrr readr rlang tibble tidyselect]; }; fgeo_x = derive2 { name="fgeo.x"; version="1.1.4"; sha256="0swps9rli74fmfb2j4kf55kw39gxz0q49m74ad4vcs0ylyp0sxrb"; depends=[memoise]; }; fglsnet = derive2 { name="fglsnet"; version="1.0"; sha256="00qn4k4xm1zfkz77lys468c1mfx3vyfjkf19wdbcvgssrmf6w0xd"; depends=[lmtest MASS Matrix matrixcalc network sandwich sna]; }; fgm = derive2 { name="fgm"; version="1.0"; sha256="0i6lbqxxjq78dql14qwqs7slnn0kyls2g3a9biabny2narwf6n3m"; depends=[fdapace JGL]; }; fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; }; fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-8"; sha256="024fzd1c7iwqprn26hwjb9l2qlvvyzl449d7iixy0x69djwsrysv"; depends=[]; }; - fhircrackr = derive2 { name="fhircrackr"; version="0.2.1"; sha256="04a4rnv2r5q4069xv6wcfslw3rnacxjcgy1k258xkjx39bwsjzwa"; depends=[data_table dplyr httr plyr stringr xml2]; }; + fhircrackr = derive2 { name="fhircrackr"; version="1.0.1"; sha256="0dq7gwfcksjqirhmq4hxfrm64i2gaqjqklkrv7xq7ribvzb8accv"; depends=[data_table dplyr httr plyr stringr xml2]; }; fiberLD = derive2 { name="fiberLD"; version="0.1-6"; sha256="1i3bl2qsc77m81l11an9ihl4vy86s8jd5x6pasib77rl2877ad4x"; depends=[doParallel foreach Matrix VGAM]; }; fic = derive2 { name="fic"; version="1.0.0"; sha256="18xz94w1ab17jfi61bdg9z3pm63g488v17ns2ivizkza4gg07pv8"; depends=[abind ggplot2 mvtnorm numDeriv scales survival tensor]; }; + fidap = derive2 { name="fidap"; version="0.0.3"; sha256="0zq07395qx59xxb3cj5axhpkwnad2h88qbm3aan43q5cip9wi2bx"; depends=[httr jsonlite]; }; fieldRS = derive2 { name="fieldRS"; version="0.2.3"; sha256="0jr2l5cnrawd6wibmb6r0sngd851z9mbz4mwprnbbqbv3hzzrpm9"; depends=[caret concaveman geosphere ggplot2 raster rgeos sp stringdist vegan]; }; - fields = derive2 { name="fields"; version="11.6"; sha256="1nsrgkw9w3mwd3sajyzc06h49gg1s0bkq6xh5b66h1n4jbcx2046"; depends=[maps spam]; }; + fields = derive2 { name="fields"; version="12.5"; sha256="08jfqlz42vq23h2yq279cs2rva9fadi4q6cmk4dvixrmyprx5xyk"; depends=[maps spam viridis]; }; fiery = derive2 { name="fiery"; version="1.1.3"; sha256="1rwnmm4n59wdsvb57bj8mx1qhz93jbvfb73sl111nwqazphrhid1"; depends=[assertthat crayon future glue httpuv later R6 reqres stringi uuid]; }; + figpatch = derive2 { name="figpatch"; version="0.1.0.1"; sha256="1chshlyc3ygyvgzyph4mix3a6kvv4w0vbnss58472h0mgl7mgx8v"; depends=[ggplot2 magick patchwork]; }; + file2meco = derive2 { name="file2meco"; version="0.1.0"; sha256="1lw3w8l2563ccvb4v0hj8qk96yam5p3rf0hcah6s93pyrz1mimyx"; depends=[ape dplyr magrittr Matrix microeco R6 rhdf5 tidyr yaml]; }; + filearray = derive2 { name="filearray"; version="0.1.1"; sha256="05zxi3w91x2hyyr1a492djj6k0s111kqqxd19nmqp4vkm2cz2cyw"; depends=[BH Rcpp]; }; filehash = derive2 { name="filehash"; version="2.4-2"; sha256="14zv7h5195dmfksgk8qvjgc2qq8253vga6267aa1bqs5bpvmdl5n"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; filelock = derive2 { name="filelock"; version="1.0.2"; sha256="00ql5fw1hidpfnm0szaavf43ahmsnvdbi8i5lr1nrcc90yaiaadc"; depends=[]; }; @@ -8737,16 +9101,17 @@ in with self; { filenamer = derive2 { name="filenamer"; version="0.2.3"; sha256="19gavhh5q7dziv0yc000w06qp58wk2cm52cxjl33p1q4cjk6gg3m"; depends=[]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; filesstrings = derive2 { name="filesstrings"; version="3.2.2"; sha256="111cjb2wja6q864wki8czpwm6xj8c3zwjlqcr8r36993ww72k6iy"; depends=[checkmate magrittr purrr rlang strex stringi stringr withr]; }; - filling = derive2 { name="filling"; version="0.2.2"; sha256="02s2q8wsnxrl3914516r6z0vksbsfmcv7y8hqjl92h4cqqr7023w"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; + filling = derive2 { name="filling"; version="0.2.3"; sha256="17vk0pndsc8xhgp4zy5dfyc36pzk2hm5zk6xijdy4xaf7k5j4wls"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; fillr = derive2 { name="fillr"; version="1.0.0"; sha256="1gx1ihp8j90ywmm6mmmfq4jd6apxawk9s5dfw3jq0wm1c290zqpv"; depends=[]; }; - finalfit = derive2 { name="finalfit"; version="1.0.2"; sha256="118ja2san73341m4vn9xmsazak4w6z6290rai4fl1jwf9amk2jnq"; depends=[bdsmatrix boot broom dplyr forcats GGally ggplot2 gridExtra lme4 magrittr mice pillar pROC purrr scales stringr survival tidyr]; }; - finbif = derive2 { name="finbif"; version="0.5.0"; sha256="0wws9nkc5c4va7psg5imd4y8a7nggl00s04m6dj43lwk0iz798s5"; depends=[curl digest httr jsonlite lubridate lutz]; }; + finalfit = derive2 { name="finalfit"; version="1.0.3"; sha256="07pniw0w9s0czxk82pw1a7j6br52fvq3yxrx2n61yyqs5cd89ymv"; depends=[bdsmatrix boot broom dplyr forcats GGally ggplot2 gridExtra lme4 magrittr mice pillar pROC purrr scales stringr survival tidyr]; }; + finbif = derive2 { name="finbif"; version="0.6.2"; sha256="1y4srrybiin16xgq1a2y80a84yq5nad4iv1a3xpcniixgk79k6l8"; depends=[digest httr jsonlite lubridate lutz]; }; finch = derive2 { name="finch"; version="0.4.0"; sha256="0q7riaxms460c6z2gb8i0q4pb348bnvry46bjd7pb9mh8fnl1i8b"; depends=[data_table digest EML hoardr xml2]; }; - findInFiles = derive2 { name="findInFiles"; version="0.1.2"; sha256="0ihvk7ml4ry8pahvh1ikldvnsa3h6rs8lq0cc4z85r2n71p982mk"; depends=[htmlwidgets]; }; + findInFiles = derive2 { name="findInFiles"; version="0.3.0"; sha256="1cnnx9ky1pd0aj3bf67z75b0dgmdgj90w0yjxlrny42a7iqnyw4n"; depends=[crayon htmlwidgets stringi stringr tibble vctrs]; }; + findInGit = derive2 { name="findInGit"; version="0.1.1"; sha256="1j5mvp34nsczmvp5jx7c9gp20q7aqaxrqm2zvj8aq31rc8mfaxk9"; depends=[crayon htmlwidgets stringr]; }; findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; findpython = derive2 { name="findpython"; version="1.0.7"; sha256="0jf10jpqla90x03kl3k77gnd255zmw9rvr8d724vb17cqawh9yar"; depends=[]; }; findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; - finetune = derive2 { name="finetune"; version="0.0.1"; sha256="0gxsm8axq15pkbsq6cnxnh3cpmqfy4jx8hk54yyx27r0x342fl0g"; depends=[cli dials dplyr ggplot2 purrr rlang tibble tidyr tidyselect tune workflows yardstick]; }; + finetune = derive2 { name="finetune"; version="0.1.0"; sha256="1raj7knxw6qw1jvd4dgps6v8zcn7akncxar7xwz63sqvw8yav45g"; depends=[cli dials dplyr ggplot2 purrr ranger rlang tibble tidyr tidyselect tune vctrs workflows yardstick]; }; fingerPro = derive2 { name="fingerPro"; version="1.1"; sha256="1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL RcppProgress reshape rgl scales]; }; fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; }; finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; @@ -8754,15 +9119,15 @@ in with self; { finreportr = derive2 { name="finreportr"; version="1.0.2"; sha256="0xkkrgmwkasxgaf3lvvxl5azwbphk83fpa2asgva86qml7vwznlc"; depends=[curl dplyr httr rvest XBRL xml2]; }; fipe = derive2 { name="fipe"; version="0.0.1"; sha256="055jav8h4wws76jahm2d5dj49wkvzchh3f2vk5d50pny4dc7smar"; depends=[dplyr forcats furrr future httr jsonlite lubridate magrittr purrr readr stringr tibble tidyr]; }; fipp = derive2 { name="fipp"; version="1.0.0"; sha256="0wr3czwsqwa1bpdcjk0r1739vjanxc0fv0vnl3r5lgykrbhw9v3r"; depends=[matrixStats Rcpp RcppArmadillo]; }; - firebase = derive2 { name="firebase"; version="0.1.0"; sha256="154a386ga9bjgam9rxp0y9033hx55p7f3294z52r6dz2y87h3lz2"; depends=[cli R6 shiny]; }; + firebase = derive2 { name="firebase"; version="0.2.0"; sha256="1nf90j24zzkhrpxm18vcfb8h0rc6jsdy6iiw119nvh4qn2ridvrk"; depends=[cli jose openssl R6 shiny]; }; firebehavioR = derive2 { name="firebehavioR"; version="0.1.2"; sha256="10krny60dkpgwjjnriap91qmrnfq1rl5ck4ynf4h6x016bv0m374"; depends=[ggplot2]; }; fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; }; - fishbc = derive2 { name="fishbc"; version="0.2.0"; sha256="1yaa1zzpfxwrjjk3kmf1bhkxd3lh2q7rc71dm7n3j30955lxqiqa"; depends=[]; }; - fishdata = derive2 { name="fishdata"; version="0.1.3"; sha256="04162m1j570cdwhffkwjs1x1qlsc20djj1jwx2hl2cqmbp584ppq"; depends=[]; }; + fishbc = derive2 { name="fishbc"; version="0.2.1"; sha256="15mlr113qgndjhyry8img50jfk0si81kw2cdgl896b0g4djc5la3"; depends=[]; }; + fishdata = derive2 { name="fishdata"; version="1.0.1"; sha256="0hskmw93pyrm5wxn1dw8vi18v11jnf03yx375hjkk38hcfnp6n5k"; depends=[]; }; fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; }; - fishflux = derive2 { name="fishflux"; version="0.0.1.4"; sha256="082y0vkzd4f3pvpjzcw3jl8vcjwdsrw7d3ms8q15swx9l7gp9f9d"; depends=[BH curl dplyr fishualize ggplot2 httr plyr Rcpp RcppEigen RcppParallel rfishbase rstan rstantools StanHeaders tidybayes tidyr]; }; + fishflux = derive2 { name="fishflux"; version="0.0.1.5"; sha256="0ni3r37s6dvj3mmr04fnr7fird4x2wxdxq9vxzabcgmx9f4ydfiz"; depends=[BH curl dplyr fishualize ggplot2 httr plyr Rcpp RcppEigen RcppParallel rfishbase rstan rstantools StanHeaders tidybayes tidyr]; }; fishkirkko2015 = derive2 { name="fishkirkko2015"; version="1.0.0"; sha256="1s8vsf604rc6qk0gahn61p3q8p9dhsbq14wsmrin7icq2xgl3y81"; depends=[]; }; - fishmethods = derive2 { name="fishmethods"; version="1.11-1"; sha256="049a25rwxqy6a8jfm0irjka3bl7vkask32f9h7fsr5ddlyzvg5pz"; depends=[boot bootstrap data_table lme4 MASS numDeriv]; }; + fishmethods = derive2 { name="fishmethods"; version="1.11-2"; sha256="0gbxm0x1pnygk7dhssarn0nps2djn03rdb6cgpl7z0ma9b9lczfm"; depends=[boot bootstrap data_table lme4 MASS numDeriv]; }; fishmove = derive2 { name="fishmove"; version="0.3-3"; sha256="1knbv087cg0czjcgdbrlpg69pp1dxb57b7ak5j1mcy7ay3a41a9h"; depends=[boot ggplot2 MASS plyr]; }; fishtree = derive2 { name="fishtree"; version="0.3.4"; sha256="00g8p885z5xcqp2chncb177s0l6lab2f069szj861z9dyf93xx4z"; depends=[ape jsonlite memoise rlang]; }; fishualize = derive2 { name="fishualize"; version="0.2.2"; sha256="19iq2n9pxqf1yl6k2231lrc0ny5r7s0h5s59whrhwfh328q5cfqa"; depends=[curl downloader dplyr ggplot2 gridExtra httr magrittr png rlang scales stringr tidyr]; }; @@ -8774,8 +9139,10 @@ in with self; { fitPoly = derive2 { name="fitPoly"; version="3.0.0"; sha256="0ws1vsh8if9i9i7820ak32b0bysjc0z09nbrk17qpms0b11cpc3g"; depends=[foreach]; }; fitTetra = derive2 { name="fitTetra"; version="1.0"; sha256="0ia6wk4gicpmn6kclsd28p7v1npwfv2blagiz0cxzwfw3njv103g"; depends=[]; }; fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.8"; sha256="0b4d7xw6inp6l1dkfwyrzxwg4vspp4vzlwrhv14ajxrqz6irj8a0"; depends=[httr jsonlite stringr]; }; + fitbitViz = derive2 { name="fitbitViz"; version="1.0.2"; sha256="1jvjb7plgfzak3j6wpgp0rzm7y6caja5ibkqfahfhid3li2iiwv0"; depends=[data_table exactextractr geodist ggplot2 ggthemes glue hms httr jsonlite leafgl leaflet lubridate magrittr OpenImageR paletteer patchwork raster rayshader rstudioapi scales sf sp varian viridis XML]; }; + fitbitr = derive2 { name="fitbitr"; version="0.2.0"; sha256="1v5mhqdiynla7rmspxp5bg6xjjxac0y3qh2nv82pr3fvzvxrrqz8"; depends=[dplyr httr janitor jsonlite lubridate magrittr purrr rlang tibble tidyr]; }; fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; - fitdistrplus = derive2 { name="fitdistrplus"; version="1.1-3"; sha256="1pjnqx0j26dai2fa4ip56wspmfsrcm9dpmxkg15y9623w5b58vbp"; depends=[MASS survival]; }; + fitdistrplus = derive2 { name="fitdistrplus"; version="1.1-5"; sha256="1p9rvvh05zqb9vzhcyzdh7i8lbmb53nj8nyn0gqcmp7wafg9cd1f"; depends=[MASS survival]; }; fitmix = derive2 { name="fitmix"; version="0.1.0"; sha256="1z7jgxz119lkyggmgpykcslv56z1i7pnbp872jkdni77sx94x89c"; depends=[]; }; fitplc = derive2 { name="fitplc"; version="1.2-3"; sha256="1yg3ch907c4gk7q8hxgwqxgngkmy125j3ni917nkzi7hn59krd1n"; depends=[car nlme]; }; fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; }; @@ -8784,7 +9151,7 @@ in with self; { fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.6.1"; sha256="1c59jaj2jz498mw2by6yss3nqmhxwn25j9ah89x2540pq4r1zifx"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; fixerapi = derive2 { name="fixerapi"; version="0.1.6"; sha256="0ikf8dn0l9c9gshp4bph3wasl0bh6lfybinc8n1rvb202231hmgb"; depends=[jsonlite tibble tidyr]; }; - fixest = derive2 { name="fixest"; version="0.8.4"; sha256="0rir4mxacick885d9wsr0czskfazvhcsp3k566vk9dw50gizd801"; depends=[dreamerr nlme numDeriv Rcpp sandwich]; }; + fixest = derive2 { name="fixest"; version="0.9.0"; sha256="10zzdgybaazwdkgrkf0jkz2iv6yl9b506yvghw0vlajnb00z0j7x"; depends=[dreamerr nlme numDeriv Rcpp sandwich]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.8"; sha256="15h2q9xgddy7gw6r52c2nk618f3z1mjn4xz9pzdvhm1d3kqggwa4"; depends=[BBmisc checkmate mlr]; }; flagr = derive2 { name="flagr"; version="0.3.2"; sha256="195c78cml2pjzfvpkaxbzcg1dfdqxi76138p0v3x3zzva9d8nlji"; depends=[]; }; @@ -8792,12 +9159,13 @@ in with self; { flam = derive2 { name="flam"; version="3.2"; sha256="0v6kcl4n7wq052p7jdgbzlh9fpk8bzlrqw12i6pib1wd3slj0asa"; depends=[MASS Rcpp]; }; flametree = derive2 { name="flametree"; version="0.1.2"; sha256="0b00wqhqf2cf5flyr4ygdiz2iil74i21gmz4xgs2hci5r7r0smck"; depends=[dplyr ggforce ggplot2 magrittr paletteer purrr tibble tidyr]; }; flamingos = derive2 { name="flamingos"; version="0.1.0"; sha256="0gic6y8wpxffpyi3zy0wh7apy4z6argxbz284n80k2mzh6lh029k"; depends=[Rcpp RcppArmadillo]; }; - flan = derive2 { name="flan"; version="0.8"; sha256="0v7xjx72zaa5g9xn82x694r9k35vc1n36dv5nbnxz46px0pczsd6"; depends=[Rcpp RcppArmadillo RcppGSL]; }; + flan = derive2 { name="flan"; version="0.9"; sha256="0g4prvlwiaf6ig6kghniqpcaxyws27345mb5qmcpgsy4jzdc4k7j"; depends=[Rcpp RcppArmadillo RcppGSL]; }; flare = derive2 { name="flare"; version="1.7.0"; sha256="0f992dmgnr6s8g3386i9bjfyf08q8srgw7sjz2yx7snj8znq7251"; depends=[igraph lattice MASS Matrix]; }; flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashCard = derive2 { name="flashCard"; version="0.1.0"; sha256="1l1g3hy0gchsmdj04d065rl71hkvxydyqsmav5qwxyz2mdkknkhi"; depends=[htmlwidgets jsonlite]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; flashlight = derive2 { name="flashlight"; version="0.8.0"; sha256="0gzpq3cmb8kspjhk74qrhlkdj8fjw75sywnwvkwbvy3cp11hffp6"; depends=[cowplot dplyr ggplot2 MetricsWeighted rpart rpart_plot tidyr tidyselect withr]; }; + flatness = derive2 { name="flatness"; version="0.1.4"; sha256="0zl1x4wn5wgm9aksb96ghh395z7fz1awglfjdiid4ak5ssbqgsbq"; depends=[data_table lattice xtable]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; flattabler = derive2 { name="flattabler"; version="1.2.0"; sha256="156q3af7bmqcaxvl35634ph8dzs6gdjxqqkgwi214kj2pywpqg2a"; depends=[dplyr readxl stringr tibble tidyr]; }; flatxml = derive2 { name="flatxml"; version="0.1.1"; sha256="1qsiqi8aszk9djlhysf6lcm41dq4pcw5jv6mdvb1mgxni7g3sgfv"; depends=[crayon httr RCurl xml2]; }; @@ -8805,28 +9173,30 @@ in with self; { flexclust = derive2 { name="flexclust"; version="1.4-0"; sha256="0x7wxk8y46ndyz6fdacym0rd6p9wh3pcfr28chjcg5d7fm849zl2"; depends=[class lattice modeltools]; }; flexdashboard = derive2 { name="flexdashboard"; version="0.5.2"; sha256="1bh759llp15fxrx2rwvxd8p3w84vjmkid32ism7zg49a127fjib4"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; flexiblas = derive2 { name="flexiblas"; version="3.0.0"; sha256="1nlddwqnqkq5lv0bnsg0rbci6sjwkplqp71zdxn6pqyysyq036gb"; depends=[]; }; - flexmet = derive2 { name="flexmet"; version="1.0.0.0"; sha256="0xhr4i46s3k7a4yz2sd1sphn8wz27xcl580s2kqkr1ifg8941kv8"; depends=[]; }; + flexmet = derive2 { name="flexmet"; version="1.1"; sha256="1xcs4gs5aanvfsf6bgj28jsjdxrx0dz475xsw8hd6y44qdgw1sqb"; depends=[]; }; flexmix = derive2 { name="flexmix"; version="2.3-17"; sha256="0jangf89174p0idh9afbicfiln2sz8jxc3bjc6n0j9036dw9n09n"; depends=[lattice modeltools nnet]; }; flexmixNL = derive2 { name="flexmixNL"; version="0.0.1"; sha256="0bk5v0cnsn1qkd1b86vj0bnpr4l9d6523kpkgzb1l1sqyscawfmm"; depends=[flexmix gnm]; }; flexpolyline = derive2 { name="flexpolyline"; version="0.2.3"; sha256="00qqxn2nps2fmaznzn8zpmkwg2k4pjcs5qzibrlw63h8c56q6f7n"; depends=[Rcpp sf]; }; flexrsurv = derive2 { name="flexrsurv"; version="1.4.5"; sha256="1xwh6fj854hr5j1mdh4cbp3hbrbdl4nb2ili876rq08wb9wq5pkf"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis statmod survival]; }; - flexsurv = derive2 { name="flexsurv"; version="2.0"; sha256="0vshsijqlzsz0xh426vsswpai1v5c990ggyniqqzsjbg3mn8dbl9"; depends=[assertthat deSolve dplyr generics magrittr Matrix mstate muhaz mvtnorm numDeriv purrr quadprog Rcpp rlang rstpm2 survival tibble tidyr tidyselect]; }; + flexsurv = derive2 { name="flexsurv"; version="2.1"; sha256="0kwij9nkdvnsn1kn12fj3hjkd2qpgw7bdda4qad7basq5p6divlp"; depends=[assertthat deSolve dplyr generics magrittr Matrix mstate muhaz mvtnorm numDeriv purrr quadprog Rcpp rlang rstpm2 survival tibble tidyr tidyselect]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="1.2.0"; sha256="06qppcjml380drd6brc60j1swasqrmdx82h6x69xpb65zn9wpa3c"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.6.5"; sha256="1njk4kc19r2n2awxjfz4svf1pivxhn12r9dqsdvbdpbfl5wmvxzl"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown uuid xml2]; }; + flextable = derive2 { name="flextable"; version="0.6.8"; sha256="1b4hyrarxbk4d1ma5gy162b13nm5r5ysi049bxgcfim50rh40igs"; depends=[base64enc data_table gdtools htmltools knitr officer rlang rmarkdown uuid xml2]; }; flifo = derive2 { name="flifo"; version="0.1.5"; sha256="03x66l3ryrjvwbxxd0ncjrb5w9kc7fswmp5psb1cb7r87f395gm3"; depends=[bazar pryr]; }; flightplanning = derive2 { name="flightplanning"; version="0.8.4"; sha256="1n0mjrqlnfv4fvl512slw3d3vmlcn2lhf89jlfg2s0xfrd9k4pq8"; depends=[rgdal rgeos sp]; }; flightplot = derive2 { name="flightplot"; version="0.1.0"; sha256="1276lsahr9kdsvp1ismm3b5syvhfr7ifizzd79f8w1h2rjblva8x"; depends=[dplyr geosphere ggplot2 ggrepel magrittr rlang sf tibble]; }; flip = derive2 { name="flip"; version="2.5.0"; sha256="08x5hwxaxbgc745gblja7gcy0b5wbp7jf90lkha75zl5cc9iyksl"; depends=[cherry e1071 plyr someMTP]; }; + flipbookr = derive2 { name="flipbookr"; version="0.1.0"; sha256="0ls51risk3qn5fagw31i2kibrxk7xk3845a1cccd83sc4c8ilgjx"; depends=[dplyr glue knitr magrittr purrr rmarkdown stringi stringr tibble tidyr]; }; + flipdownWidgets = derive2 { name="flipdownWidgets"; version="0.1.0"; sha256="1qlpav9s51w9nkszfkad87cfbc7jq4n0kmgis8hrin093w0whp7a"; depends=[htmlwidgets]; }; flipdownr = derive2 { name="flipdownr"; version="0.1.1"; sha256="18z6y9anwg264gwqpxvm8mmv7xvc4m323mkg9db424vd1ji560f3"; depends=[checkmate glue htmltools jsonlite]; }; flippant = derive2 { name="flippant"; version="1.5.3"; sha256="1d1rrmnhbbixkwscw2gqk6pm8jvvgikyrd4hzrpif4qd5xj833dj"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr pracma stringi withr]; }; - flipr = derive2 { name="flipr"; version="0.2.1"; sha256="0xb47zd8irhdsi86w20nr42fq9k593hpc2lzdszw47ipirvrfbad"; depends=[cli ggplot2 magrittr purrr rlang tibble viridisLite withr]; }; + flipr = derive2 { name="flipr"; version="0.3.1"; sha256="1k6ykmj58c6vv8p1cn2wy9amlyxgrw3vphh97bv0pqqxyhnrlxjm"; depends=[cli dials ggplot2 magrittr optimParallel pbapply purrr R6 Rcpp rgenoud rlang tibble usethis viridisLite withr]; }; flipscores = derive2 { name="flipscores"; version="1.1.0"; sha256="0pznbv8gq6jx0hd9dq6yjxyz4p75h8x0jznfa02yh4xdzjmamiw6"; depends=[car flip MASS plyr]; }; - float = derive2 { name="float"; version="0.2-4"; sha256="1wf1dfybgbhvh9sa5z41xkh8liwp5n9gyydfq2mpg6bag0r457z1"; depends=[]; }; + float = derive2 { name="float"; version="0.2-6"; sha256="1bx5yxkb123001v31jjk7h7f0qissmjydvbil5cj3jvmqkayq1a1"; depends=[]; }; flobr = derive2 { name="flobr"; version="0.2.1"; sha256="16qxsvpdznw0wlmcxc6jwf550hx7yx1rifds00lq0kxly1pc4aak"; depends=[blob chk lifecycle]; }; flock = derive2 { name="flock"; version="0.7"; sha256="1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"; depends=[Rcpp]; }; flood = derive2 { name="flood"; version="0.1.1"; sha256="0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p"; depends=[copula evd magrittr TLMoments]; }; flora = derive2 { name="flora"; version="0.3.4"; sha256="17drlfvvrndal4cf5nw20xb9viybagvb4vll1kxdrhvsvfz5yap6"; depends=[dplyr httr jsonlite stringdist]; }; - florestal = derive2 { name="florestal"; version="0.1.3"; sha256="12d3mfcix0rbkdn25c6fi0g91dlf92fv58g7bzal3118shrdgyjg"; depends=[BiodiversityR cowplot data_table dplyr flextable ggplot2 officer tidyr]; }; + flow = derive2 { name="flow"; version="0.0.2"; sha256="0aa2nfk1i99mcsnfmziyfbsg4w1x58xnqzgwpyrx31yigrd20515"; depends=[htmlwidgets nomnoml rstudioapi styler webshot]; }; flower = derive2 { name="flower"; version="1.0"; sha256="1h2fvpjrvpbyrqb8hd51sslr1ibpwa7h9fiqy9anvf2yim5j11yq"; depends=[]; }; flowfield = derive2 { name="flowfield"; version="1.0"; sha256="1cx3i0w3xq781mmms4x20fshlf1i9bwxw9bxx562crix3fq3m50j"; depends=[]; }; flowr = derive2 { name="flowr"; version="0.9.11"; sha256="1cbbfrvgzqclvbhy20vjwgxbvnn3ljh0k1k54jf2si10bfw3zzi5"; depends=[diagram params readr whisker]; }; @@ -8838,17 +9208,17 @@ in with self; { flying = derive2 { name="flying"; version="0.1.3"; sha256="04wfcsbq8icvk1nnczvic5cp4nb40hxj3g6lasyb1dvhsh0svg0q"; depends=[kableExtra knitr Rcpp rmarkdown]; }; fma = derive2 { name="fma"; version="2.4"; sha256="1x175mhljvplm7b2iwcvkzalv3a79p8gqj9d4f06l5v4shxlrab9"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; - fmcmc = derive2 { name="fmcmc"; version="0.4-0"; sha256="10dr9zm92a7av43i3d03ni44f71c6vh6v5pznny8f47p8bzfhzih"; depends=[coda MASS Matrix]; }; + fmcmc = derive2 { name="fmcmc"; version="0.5-0"; sha256="0z1r5fdz1dpf3rvppk28g43xwvpi0l3207338rgfr8zbvlgwfa1a"; depends=[coda MASS Matrix]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; fmerPack = derive2 { name="fmerPack"; version="0.0-1"; sha256="0p9jfgkzs97r6ya1x8ax7bza17b03grqxa22ja13s12vj0cdkv78"; depends=[abind flexmix glmnet MASS Rcpp RcppArmadillo]; }; fmf = derive2 { name="fmf"; version="1.1.1"; sha256="0b26040a39jys1z3h9mq9k7rjr0iyiialq442ir8vgzvmrh383cs"; depends=[C50 caret dplyr e1071 factoextra FactoMineR ggplot2 kernlab Rcpp RcppArmadillo solitude]; }; fmpcloudr = derive2 { name="fmpcloudr"; version="0.1.5"; sha256="07fvmrprv0pka1wgp5ygcvv86jvn3h30xxkx44ssin15hfmank69"; depends=[dplyr httr jsonlite lubridate magrittr tidyr]; }; fmri = derive2 { name="fmri"; version="1.9.6"; sha256="1wh77xwpm8f9d9vky3r7vfmkik3hls008ifk8hkm2rq6i06jj53n"; depends=[aws metafor nlme]; }; fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; - fmsb = derive2 { name="fmsb"; version="0.7.0"; sha256="0x1wkzfdvv4s5xmr0whcwjz4aac71gacwymj2c3mzj2bbswwlw45"; depends=[]; }; - fmtr = derive2 { name="fmtr"; version="1.5.0"; sha256="04vx2ml4xik6q8hm1jv5bbk36m5vlbbm0d9vcyg6y1mwh9vxl4jq"; depends=[crayon tibble]; }; + fmsb = derive2 { name="fmsb"; version="0.7.1"; sha256="09pq7p7i6vkq9av7l7x9hicl9sqh7xn96f9pac117hy6z852jvi2"; depends=[]; }; + fmtr = derive2 { name="fmtr"; version="1.5.2"; sha256="1jh7d23rxxv477h60nz164da8a269zw910k98x2kg1fqa76g9jxy"; depends=[crayon Rcpp tibble]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; - foghorn = derive2 { name="foghorn"; version="1.3.2"; sha256="0rnrwd94ym893fqrfxw8lkyj3zn72kqnxk9yvzxgv8w0c4hn1pj3"; depends=[clisymbols crayon curl httr jsonlite rlang rvest tibble xml2]; }; + foghorn = derive2 { name="foghorn"; version="1.4.2"; sha256="11riav36ncxybx4yrrrwrykg9xmh2fpp5m92zl9prhi7g0rllg6f"; depends=[clisymbols crayon curl httr jsonlite rlang rvest tibble xml2]; }; foieGras = derive2 { name="foieGras"; version="0.7-6"; sha256="0g4c9id7q3jgjcgwmncp4bkw9njwb41cp6ycv7psiidkhmnzi03d"; depends=[assertthat CircStats dplyr furrr future ggplot2 lifecycle lubridate mvtnorm patchwork purrr RcppEigen sf stringr tibble tidyr TMB tmvtnorm trip]; }; folderfun = derive2 { name="folderfun"; version="0.1.4"; sha256="0rns8590r1897lj0gyrlj0zbaxjw2gjaxwnwdxiiw2kvyq7mjkis"; depends=[]; }; folio = derive2 { name="folio"; version="1.0.0"; sha256="1al4ampy95fsxxlqhp63qmc0xn51gfa0gw2gghy28a4dqjg39sfg"; depends=[]; }; @@ -8856,7 +9226,7 @@ in with self; { fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; }; fontMPlus = derive2 { name="fontMPlus"; version="0.1.1"; sha256="1hvviawbfs3m7mr46y2sjdxkksi10vpbnjic11rjaxqcy9a43f4y"; depends=[extrafont ggplot2 hrbrthemes]; }; - fontawesome = derive2 { name="fontawesome"; version="0.2.1"; sha256="0s94njqadn5zd9alysk2cay9dp44g20kah23wdcgkqf8dfwf9vb5"; depends=[htmltools rlang]; }; + fontawesome = derive2 { name="fontawesome"; version="0.2.2"; sha256="0r6zb5175cr4ybqj6bl0mbhadwv9xjxaf32yjc0y76rw3d6vcbap"; depends=[htmltools rlang]; }; fontcm = derive2 { name="fontcm"; version="1.1"; sha256="1z6b4qdgj5vhvjqj90sm1hp0fffi1vxzvq71p0flxybzyb7d15la"; depends=[]; }; fontquiver = derive2 { name="fontquiver"; version="0.2.1"; sha256="0qv3i9hch7cygl9983s3w68wfh5qvym2jkm52pp06p6mq8a1i1wm"; depends=[fontBitstreamVera fontLiberation]; }; foodingraph = derive2 { name="foodingraph"; version="0.1.0"; sha256="0v40yk7lx0zxvpd3vz48h5gzx8ds8v3l12i2r7v9safgfvip6fvn"; depends=[cowplot dplyr ggplot2 ggraph igraph labeling magrittr minerva rlang stringr tibble tidyr viridis]; }; @@ -8864,14 +9234,14 @@ in with self; { foolbox = derive2 { name="foolbox"; version="0.1.1"; sha256="06lcr5v6bcqqxskrwdm16b46zq4h67x8bwqya88jxs5bgi5w0hj3"; depends=[magrittr rlang]; }; footballpenaltiesBL = derive2 { name="footballpenaltiesBL"; version="1.0.0"; sha256="1my67157frp4pxl84sb6dnb7rzp99g59mp9iwwv1s6wc391zfbsp"; depends=[]; }; footprint = derive2 { name="footprint"; version="0.1"; sha256="00m3jaxiacf9wxa0wg0qxhp6c0prbf2l5c2cid6anz8rc5b6angv"; depends=[airportr dplyr magrittr rlang]; }; - foqat = derive2 { name="foqat"; version="1.6.4"; sha256="0s9nannxssfpqqfccz17k657c37f0b0bkqk05nrsrh62nlshhybd"; depends=[dplyr ggplot2 ggplotify gridExtra lmodel2 lubridate magrittr plyr reshape2 rvest stringr xml2]; }; + foqat = derive2 { name="foqat"; version="1.7.1"; sha256="10vyf98xzriiqqpmmzz3nzhrnnxfjp7h71dxgwsikg3j9va8pfqk"; depends=[dplyr ggplot2 ggplotify ggprism gridExtra lmodel2 lubridate magrittr plyr reshape2 rvest scales stringr xml2]; }; forImage = derive2 { name="forImage"; version="0.1.0"; sha256="1p8zfndvm7x7pnryphz944hgxcchvc6mwnr6ap15m0i6kwsh0nb4"; depends=[dplyr magrittr reticulate tibble]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; forcats = derive2 { name="forcats"; version="0.5.1"; sha256="12d2nv2w15085jscgidmjdnr1ryymciflcmal6ldmgp2fkl9dyy4"; depends=[ellipsis magrittr rlang tibble]; }; foreSIGHT = derive2 { name="foreSIGHT"; version="1.0.0"; sha256="0f1wy7iy3189890qi0gfqwbif3qlp9bfnzzqlg1yvwxi5pw55ikm"; depends=[cowplot directlabels doParallel fields GA ggplot2 jsonlite moments progress RColorBrewer rcorpora Rcpp rlang scales viridisLite zoo]; }; foreach = derive2 { name="foreach"; version="1.5.1"; sha256="1qb83b1jvpmk8d6kfibkm5q2hiki0x5gipy758mwa62n56gdcnpv"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; - forecast = derive2 { name="forecast"; version="8.14"; sha256="12bfw029xb1dndcjyn2r7a51i7hnkkbdilp69k97sz2v8b7v1y3s"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; + forecast = derive2 { name="forecast"; version="8.15"; sha256="0x4ij55sb45qnwba3bybs50vsvv82q3j8p47xmbv959h13nsnfn7"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca zoo]; }; forecastHybrid = derive2 { name="forecastHybrid"; version="5.0.19"; sha256="1pg3wbmlagr01j3nikfh4dvh5lvbdfp7069wx9h9xsl7d4481ly1"; depends=[doParallel foreach forecast ggplot2 purrr thief zoo]; }; forecastML = derive2 { name="forecastML"; version="0.9.0"; sha256="01lqbmdmd6sk5xka19i9d466bzihxgp652v0kr13r82b591f67vq"; depends=[data_table dplyr dtplyr future_apply ggplot2 lubridate magrittr purrr rlang tibble tidyr]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.3-0"; sha256="0p47x7ic2ib7znqbp8br4b2ci75f5w8x413z9g4n30m002p7irp1"; depends=[Rcpp]; }; @@ -8879,19 +9249,19 @@ in with self; { forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; forestControl = derive2 { name="forestControl"; version="0.2.1"; sha256="1m75s98bs8n3qad8gp6a333dh3mbi0rbbic9iwnsqyklzkhmx1nr"; depends=[dplyr magrittr purrr Rcpp tibble]; }; - forestError = derive2 { name="forestError"; version="1.0.0"; sha256="07v6v5n3ixzv2if21a5ljmg12hk871r26c5gv8c5z8ki4562y4r7"; depends=[data_table purrr]; }; + forestError = derive2 { name="forestError"; version="1.1.0"; sha256="1dk19sgx760ph464cya4gxb1i3rpnydnhrbqyb25jja0dryjapcm"; depends=[data_table purrr]; }; forestHES = derive2 { name="forestHES"; version="1.0-1"; sha256="05l04ly3l8xkdz3rnnrfa4y0wfmh1am2ixbz1vfarnqkc0zppwpj"; depends=[]; }; forestRK = derive2 { name="forestRK"; version="0.0-5"; sha256="0zm0q7bckmjl1j3yh5pw4r6rq64rfmzjvmvqniza5691jagjz60m"; depends=[ggplot2 igraph knitr mlbench partykit pkgKitten rapportools]; }; forestecology = derive2 { name="forestecology"; version="0.1.0"; sha256="04b6qxf5sdjc71f2c5bbr3y5c6i6lgvkx76kja8341krvf8qh0fr"; depends=[blockCV dplyr forcats ggplot2 ggridges glue magrittr mvnfast patchwork proxy purrr rlang sf sfheaders snakecase stringr tibble tidyr yardstick]; }; forestinventory = derive2 { name="forestinventory"; version="1.0.0"; sha256="1v5gyx8i64zn1cinwvm86syq26vhfzw2maaiymy32fphzybwxivf"; depends=[ggplot2 plyr tidyr]; }; - forestmangr = derive2 { name="forestmangr"; version="0.9.3"; sha256="1x6iv225sxrzxg8g750zhpl158mvisa6z24y4xpm747qqcczy4n8"; depends=[broom car dplyr FinCal forcats formattable ggdendro ggplot2 ggpmisc ggthemes gridExtra magrittr miniUI minpack_lm plyr purrr rlang scales shiny systemfit tibble tidyr tidyselect]; }; + forestmangr = derive2 { name="forestmangr"; version="0.9.4"; sha256="1zlp7lnawbfqw60552cwnh280spqj7p2qvn2xwz5y7wly2d7d4fm"; depends=[broom car dplyr FinCal ggdendro ggplot2 ggpmisc ggthemes gridExtra magrittr miniUI minpack_lm plyr purrr rlang scales shiny systemfit tibble tidyr]; }; forestmodel = derive2 { name="forestmodel"; version="0.6.2"; sha256="0pl9r8j2qd00b9kl585b4k54kic5fvzc56i8cn3hm5yp2hrrwyws"; depends=[broom dplyr ggplot2 rlang tibble]; }; - forestplot = derive2 { name="forestplot"; version="1.10.1"; sha256="1vibb1vwf0fhnwbjlfc64b5q84vibpmgpylzjvdpykrrvsk26w1n"; depends=[checkmate magrittr]; }; + forestplot = derive2 { name="forestplot"; version="2.0.1"; sha256="0bzwi6ws0qjq1pqiadssynbkxxd4zjp974jfdplmv16fcyszqhyi"; depends=[checkmate magrittr]; }; forestr = derive2 { name="forestr"; version="2.0.2"; sha256="1kz8f3x2dmsprj2r23gz61fpwg7n14nbjxr16x4cpixvnk427p94"; depends=[dplyr ggplot2 moments plyr tibble tidyr viridis]; }; forestry = derive2 { name="forestry"; version="0.1.0"; sha256="0q7m0mrig8z2b2z2fng58qlqa6g58xlhfzchil2dvjh6xf3qvsh8"; depends=[data_tree]; }; foretell = derive2 { name="foretell"; version="0.2.0"; sha256="18vi438n480gizfhnciw67gngvbjnmky19186b1wy75av7fgc1gp"; depends=[nloptr]; }; forge = derive2 { name="forge"; version="0.2.0"; sha256="0pjfzsc35agkh0zfw2czwajkbsyn6liys5irl5bhz5r1vim3jmwa"; depends=[magrittr rlang]; }; - formatR = derive2 { name="formatR"; version="1.9"; sha256="0vbzvb91y5cxjbnwpww0r40r6m1l9w1qa979sv7ghhalzr7bib3i"; depends=[]; }; + formatR = derive2 { name="formatR"; version="1.11"; sha256="0353aj975mj0yjc91z76bbfy86y7d5cvlqqyfr93cdng14nnd0dx"; depends=[]; }; formattable = derive2 { name="formattable"; version="0.2.1"; sha256="1vdxi0xmg019qyzjrp8bkjxciz245jcxsrkhfzd44ynqcwi4s3ag"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.7.1"; sha256="15d3ikfmsh9zszfgfkrxb3jkipl41inm7n6bhs73kwlnklnygq2g"; depends=[operator_tools]; }; formulaic = derive2 { name="formulaic"; version="0.0.8"; sha256="1nx6a73vw2hjbnqaw8x17ghhljd6z2avxv4arz3c3785pyayhg9k"; depends=[data_table]; }; @@ -8910,11 +9280,11 @@ in with self; { fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; fpc = derive2 { name="fpc"; version="2.2-9"; sha256="0f7sfmpcycr9y7cy5gasyjm2ardxa62kglqms92mcr68jrp01c19"; depends=[class cluster diptest flexmix kernlab MASS mclust prabclus robustbase]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; + fpcb = derive2 { name="fpcb"; version="0.1.0"; sha256="086060z6r79m527bb9ah6yk2z15xq8x27gyvbz23xbm6mhrxsa1y"; depends=[FNN]; }; fpeek = derive2 { name="fpeek"; version="0.1.2"; sha256="0kv46g21ndxchg3q8ynq7hjjkh6i2zlc21axn5y1jjzigrw047ii"; depends=[Rcpp]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; fplot = derive2 { name="fplot"; version="1.0.0"; sha256="0c8rgw23dvmwk2ssy8mbn29am72k6vji0xymz9rn5lrlmjk1lbpb"; depends=[data_table dreamerr Formula Rcpp]; }; fplyr = derive2 { name="fplyr"; version="1.2.1"; sha256="0k53rc7p0khv3mssghplz3ggzni2vl168mbwg72dgsn9b8nm98sy"; depends=[data_table iotools]; }; - fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; fpop = derive2 { name="fpop"; version="2019.08.26"; sha256="1gz5db9hlkvzkp5y7zzn9h57qz7ilpdyxyf05vy9kxbj36kgc19n"; depends=[]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; fpp = derive2 { name="fpp"; version="0.5"; sha256="1jqnx6bgpvnbbj2fa2b6m6aj8jd5cb9kz877r8kp7a5qj62xv1ww"; depends=[expsmooth fma forecast lmtest tseries]; }; @@ -8922,16 +9292,17 @@ in with self; { fpp3 = derive2 { name="fpp3"; version="0.4.0"; sha256="1920hlckc1bvdhqrp6mdl900c34k62v87k5l22zwwycx5gcicrxh"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata urca]; }; fptdApprox = derive2 { name="fptdApprox"; version="2.2"; sha256="10f9n6cx5n6djblj97a2zw4khaj3phchmq4l8gk2fy535jjqaqlr"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.5-1"; sha256="1dhfjlhr9sb38qgpsx0sm73l9lgc13d0fk32l7fmjfnalhr3n45q"; depends=[]; }; + fracdist = derive2 { name="fracdist"; version="0.1.1"; sha256="0ssg8h1mvkzpwq4dn9fdxjg1vzhcv6606wsy0xrm1wz9p6s5rx74"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.7"; sha256="124p5x59smqf8ba0xwhlq69w77zga2bv9plzwkadf700lzvaj2wx"; depends=[emg numDeriv]; }; fractD = derive2 { name="fractD"; version="0.1.0"; sha256="1cnp8qrc6jpdj0grwkvn5jkdymjfhg5ybbhqvknxirc4g981q8bj"; depends=[imager plyr]; }; fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; }; fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; - fracture = derive2 { name="fracture"; version="0.1.2"; sha256="1ankyzasm73ijniq9f70ca9j5my60rhkp5hy9mzf64rxnll1mpsi"; depends=[Rcpp]; }; + fracture = derive2 { name="fracture"; version="0.1.3"; sha256="0zhal8i6bxmif90yyynd7mhdnfb8f4hv4zs421r8ky4wr90ki429"; depends=[Rcpp]; }; fragility = derive2 { name="fragility"; version="1.1"; sha256="0gjxc4bykqjmj54mxjh27bzkbf8ydrzzzlb7xnq9jljmr139zhyk"; depends=[metafor netmeta plotrix]; }; frailtyEM = derive2 { name="frailtyEM"; version="1.0.1"; sha256="0ajqmn8353va8k3idsl90xsrhpdqarfmvg84d4kwayxlqy6dmbb0"; depends=[expint ggplot2 magrittr Matrix msm numDeriv Rcpp survival tibble]; }; frailtyHL = derive2 { name="frailtyHL"; version="2.3"; sha256="115iv1d2c9mvviick8b24bn6kdbsvnf21nvfjm9a8dk0x07hrv5g"; depends=[cmprsk Matrix survival]; }; - frailtySurv = derive2 { name="frailtySurv"; version="1.3.6"; sha256="0k41a5x7qzrajk2l59q5b8kjj084vids4ailr8r7r2lnf6r9xrav"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; - frailtypack = derive2 { name="frailtypack"; version="3.3.2"; sha256="1prj0y4skavzjh3w9zxf3vcmcdlkvg2ysshgr65ln9hzn281zqn0"; depends=[boot doBy MASS nlme rootSolve shiny statmod survC1 survival]; }; + frailtySurv = derive2 { name="frailtySurv"; version="1.3.7"; sha256="0jyqnj4mscfcjg38a04246xfggnjgwdgwd7w4krz6wa1c3igzx0f"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; + frailtypack = derive2 { name="frailtypack"; version="3.4.0"; sha256="0i46jrgsq01j79ha76j29j26ias1hxjb97rf0cp0yxbc7xnaz6hi"; depends=[boot doBy MASS nlme rootSolve shiny statmod survC1 survival]; }; frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; }; frambgrowth = derive2 { name="frambgrowth"; version="0.1.0"; sha256="1xmy1zxp7aa2n8frlxhn1bl41zda1jldvvxb3q41yam3pslc8m1q"; depends=[]; }; franc = derive2 { name="franc"; version="1.1.3"; sha256="0va6zc9xm9gh14d9p8j7rlw1aj93iafqdljr9fqy7c18awlw545k"; depends=[jsonlite]; }; @@ -8943,9 +9314,9 @@ in with self; { freedom = derive2 { name="freedom"; version="1.0.1"; sha256="1mrdl2cqdm2c68lx7lyixgiqw6xzwnx9c8j5q4annhiz107i9i22"; depends=[]; }; freegroup = derive2 { name="freegroup"; version="1.1-0"; sha256="0ssshs2d6l2ip1xx9x581w0cdnd2459a1mh360ybwajkjgak2ci6"; depends=[magic magrittr plyr]; }; freesurfer = derive2 { name="freesurfer"; version="1.6.8"; sha256="0ks6ms5vp38pykcg66w960nmfgq383iprrbbzw5dlx9xnrx4yhbh"; depends=[neurobase R_utils reshape2]; }; - freesurferformats = derive2 { name="freesurferformats"; version="0.1.14"; sha256="1icfg4wgxjmdl6h0zf084lqm3a3g7602cfycfy6j4dczd050kdjq"; depends=[pkgfilecache xml2]; }; - freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.6"; sha256="0r3icgnq3jk4fm6z92cmhzdmflbk5df8zsmjg0dzpc4y48xafnk7"; depends=[fontquiver]; }; + freesurferformats = derive2 { name="freesurferformats"; version="0.1.15"; sha256="092p6za8xzhx7zn1h0a8rw1sss3rdml0pzkgapgyvykqlsr7nmp9"; depends=[pkgfilecache xml2]; }; frenchCurve = derive2 { name="frenchCurve"; version="0.1.0"; sha256="1b8lkmhydz4jq8h5p117fwaygbsillzcfx0p7w0ljj8b8v57r6l9"; depends=[sp]; }; + frenchdata = derive2 { name="frenchdata"; version="0.2.0"; sha256="13n0phncbxim9ak897hmjw1p7ph5wi3jn2m8hgmm3bywxbxcg1qz"; depends=[assertthat cli dplyr fs httr magrittr purrr readr rlang rvest stringr tibble tidyr]; }; freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="2.0.1"; sha256="0ig0ygnlcb5ndjjm5x8jpp37gvgwli9xv6zsvbbgfh72q418qswp"; depends=[matrixcalc mvtnorm]; }; freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; }; @@ -8954,9 +9325,10 @@ in with self; { frequency = derive2 { name="frequency"; version="0.4.1"; sha256="0sjsc803ysyg2gfzb7z4jb2sikwxs99is2m03k5glfy3ylgphn0d"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.3"; sha256="1yzpgflldcdsd5kj0jpyj0vwx25f3l0x344glbrwvlwgdax9dkg8"; depends=[knitr pbapply urca vars]; }; frequentdirections = derive2 { name="frequentdirections"; version="0.1.0"; sha256="0rmifh221c8z3cqyqg0bfxnih9f64hvv98jz44i6grnlablfwwgw"; depends=[ggplot2]; }; + frequentistSSD = derive2 { name="frequentistSSD"; version="0.1.0"; sha256="0r2vy8n6d8c2vdijd0cyg9vv4m0w0a6m2piblky48c1wm2qznfd2"; depends=[survival]; }; fresh = derive2 { name="fresh"; version="0.2.0"; sha256="1787mm6w2s5x9scxy7r9cb77rgpmy4ngwkn4z8g3gs48mrab4bd9"; depends=[htmltools rstudioapi sass shiny]; }; friends = derive2 { name="friends"; version="0.1.0"; sha256="164p9g07vq3xs2lgg250yvzca4b0mp81pqbnjfdkzcqh5hmahsan"; depends=[tibble]; }; - fritools = derive2 { name="fritools"; version="1.4.0"; sha256="08d79dwlm0jx00gl0w1a6ccr46l58z2kphlp0sx2dakc2lma6vki"; depends=[]; }; + fritools = derive2 { name="fritools"; version="2.2.1"; sha256="18q036rbkk7x01rpjp9byqfdjsrcn1yhsgjmqijy03n5zdy6ccjq"; depends=[]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; frmhet = derive2 { name="frmhet"; version="1.1.3"; sha256="07sgsfhzrci8g1b0gicjfca1mgd8ppfqpkpp4q9bdxnjvdvlf45s"; depends=[]; }; frmpd = derive2 { name="frmpd"; version="1.1.0"; sha256="0irgqdr0vr8k408lsxcrjkjbjvqvmy5mnjw9c1ghs86isrp5mciz"; depends=[]; }; @@ -8966,10 +9338,11 @@ in with self; { frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frost = derive2 { name="frost"; version="0.0.4"; sha256="03snjlq4b9j84v0yimc3xzgjvryzzi76b9n53k0s2lvv1yzrri7x"; depends=[]; }; frostr = derive2 { name="frostr"; version="0.2.0"; sha256="1bsgdskdbyryq7jvhnb4z4xb1m5vadqv00qjlkgp41xh71wp2brs"; depends=[httr jsonlite tibble tidyr]; }; + frscore = derive2 { name="frscore"; version="0.1.0"; sha256="19i7m8r8qmhymav36jzfg6zyhjscazs9pqzbxbb0dgjqjkm9j5qh"; depends=[cna dplyr magrittr Rfast rlang]; }; fruclimadapt = derive2 { name="fruclimadapt"; version="0.4.4"; sha256="19siwjjcjh0kh2wpbabgzjwrfgg2al0g7d4z91wdcp3spwx308vk"; depends=[data_table lubridate tidyverse zoo]; }; fs = derive2 { name="fs"; version="1.5.0"; sha256="15rqc3ljmcmgfvadj1j1kq7kvibagxic8sgplhlcdqqxax9idprn"; depends=[]; }; fsMTS = derive2 { name="fsMTS"; version="0.1.5"; sha256="1vxj9wkzpbk44hby4fdyhj72748c65by612kpphs6vmgzmw4y471"; depends=[freqdom glasso lars mpmi randomForestSRC]; }; - fsbrain = derive2 { name="fsbrain"; version="0.4.2"; sha256="173jg09ixi21djkg865wzr652azvqrc7zvskrwln5ryzz89093j5"; depends=[data_table fields freesurferformats magick pkgfilecache reshape rgl squash]; }; + fsbrain = derive2 { name="fsbrain"; version="0.5.0"; sha256="0ifaz25s8g53agyjxm252gmav3iqf0h51bnayc05v1fjj8z5khzs"; depends=[data_table fields freesurferformats magick pkgfilecache reshape rgl squash viridis]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.4"; sha256="18fhyfl3f8syyc3g937qx87dmwbv7dray6b97p1s6lnssiv61gsw"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.4-9"; sha256="1iaqqdwhh29fhq4r64adfrjmsyzq4v60bz9111vkazj4kr45wxxv"; depends=[ggplot2 rJava rrcov]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; @@ -8977,6 +9350,7 @@ in with self; { fsn = derive2 { name="fsn"; version="0.1"; sha256="1a5vsrk9l19rh46kxrfmgcv07l0pr4zn1q2f0chivq43pwmfm194"; depends=[Rfast]; }; fso = derive2 { name="fso"; version="2.1-1"; sha256="0hn2ypm0nwfbmnh9il78pi30x7gfmayfangqyh0d63ngyz40bvma"; depends=[labdsv]; }; fspe = derive2 { name="fspe"; version="0.1.0"; sha256="0cdl6749nqz2nmknn8mjxxxm8axix9iv2micviwg7fhynqhsffp1"; depends=[corpcor GPArotation psych]; }; + fsr = derive2 { name="fsr"; version="1.0.0"; sha256="0mavf8kbs8176j6qp773myc7h8m4l8x10n3w630jp6d6csj8jgb2"; depends=[dplyr e1071 FuzzyR ggplot2 lwgeom pso rlang sf stringr tibble]; }; fssemR = derive2 { name="fssemR"; version="0.1.6"; sha256="1l80anvlf21kvwb95w5mn0i2q773z0vbznx1lqvgsawprhcdiv20"; depends=[glmnet igraph MASS Matrix mvtnorm qtl Rcpp RcppEigen stringr]; }; fst = derive2 { name="fst"; version="0.9.4"; sha256="0vwclzxww8mw9nnpyj29bn71mrr8jjg7ka03979h9rbzw6d9bjrr"; depends=[Rcpp]; }; fstcore = derive2 { name="fstcore"; version="0.9.6"; sha256="1445m8gn41q9l9m25d5m4682yy0msb5jnmdd8w310cxxs1riza93"; depends=[Rcpp]; }; @@ -8994,10 +9368,11 @@ in with self; { fugue = derive2 { name="fugue"; version="0.1.7"; sha256="1myvi9cizxvahb6wn2k26v3x958xsrm2p414ar05injmfjdfnsmi"; depends=[]; }; fullROC = derive2 { name="fullROC"; version="0.1.0"; sha256="0pn4lh59snfcyyi28350lm4n9xh6y25hpjr38dc33bic4cfbqiyr"; depends=[]; }; fullfact = derive2 { name="fullfact"; version="1.5"; sha256="1p2f4rf54hd0icy49fkq6p973rqisjjmmr1brwcv0fg22nv2kidg"; depends=[afex lme4]; }; - fulltext = derive2 { name="fulltext"; version="1.7.0"; sha256="10gylx7ckc5cxzp31p066qsy86941k528baddyf36q33gy46mkdv"; depends=[aRxiv crul data_table digest fauxpas hoardr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble xml2]; }; + fulltext = derive2 { name="fulltext"; version="2.0"; sha256="104wkas9azyb2drfaz1hrgbx2ilbb0k2mb8411l10rsbkqva099f"; depends=[aRxiv crul data_table digest fauxpas hoardr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble xml2]; }; fun = derive2 { name="fun"; version="0.3"; sha256="09601ma4irmpkgjspq6zmr383m1pbgyfdkf7gw8w8gp0q7ab89aq"; depends=[]; }; - funData = derive2 { name="funData"; version="1.3-5"; sha256="0qz6kywd6xp292yvzf5znpw0qd02zadmp29jd1kchnydbf3sk0mh"; depends=[abind fields foreach]; }; + funData = derive2 { name="funData"; version="1.3-7"; sha256="1w8k7gcm9aqamnmbr69si2r4zb9hkfysmlbrygb6jidf2mfr9kr5"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; + funGp = derive2 { name="funGp"; version="0.2.2"; sha256="1khdnxr7gsswv0v867anh12ah7whqmv9q9i06w1axv13jrriwbac"; depends=[doFuture foreach future knitr microbenchmark progressr qdapRegex scales]; }; funHDDC = derive2 { name="funHDDC"; version="2.3.1"; sha256="1fd3n3y5icm2lcdz5jzfybbbmmzbbgq949x1g4bx4s0h0dnc0rkk"; depends=[fda MASS]; }; funLBM = derive2 { name="funLBM"; version="2.2"; sha256="0krv0cid34rgcik0hk1fhvsi3cbc19scgsnssczfb0c79jkxy3cw"; depends=[abind fda funFEM ggplot2]; }; funModeling = derive2 { name="funModeling"; version="1.9.4"; sha256="1zhmazw77phcdwj9wwxpwjfhwd8wyjc538acqiwq9f6sz8fw1cbb"; depends=[cli dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales stringr]; }; @@ -9007,10 +9382,8 @@ in with self; { functClust = derive2 { name="functClust"; version="0.1.6"; sha256="0mdfxvrx3wk497a9bbkwnzbm6hm2s4wqs3h09m3hj48ybpqmhz9i"; depends=[clusterCrit multcompView]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functiondepends = derive2 { name="functiondepends"; version="0.2.1"; sha256="0i6ppm5xz1m3m29lvz4nqm31k33w18j8af160lalgc01i1n4n11c"; depends=[dplyr magrittr purrr stringr tibble tidyr tidyselect]; }; - functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; - fundiversity = derive2 { name="fundiversity"; version="0.0.1"; sha256="1pdmw8q374mfkvqk9wpg9x4yhanxl7jnm1csc5djlhk25md7brbd"; depends=[geometry Matrix vegan]; }; - funest = derive2 { name="funest"; version="0.0.1.3"; sha256="1pi556klfnbmrsx5c0f3v4hdn5m4dxxm71ijivanpwfqnfls8xh3"; depends=[funData MFPCA pec prodlim purrr ranger Rdpack survival tdROC]; }; - fungible = derive2 { name="fungible"; version="1.97"; sha256="0vj9nxqzx29sa3iqrplramk7xzxi9h5qss0iqgh2q623izz0s5ih"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; + fundiversity = derive2 { name="fundiversity"; version="0.2.1"; sha256="11gz1h7mlb0880w3cv5sb4h6qpfs6az3vfhd3527s6sw43n87l29"; depends=[future_apply geometry Matrix vegan]; }; + fungible = derive2 { name="fungible"; version="1.98"; sha256="02jp5ycahraqi6349r49lh9768v7rk96336f2ksxip85m5qidc0f"; depends=[clue GPArotation lattice MASS mvtnorm nleqslv Rcsdp RSpectra]; }; funique = derive2 { name="funique"; version="0.0.1"; sha256="0p9k4nxjns1xid9vmslkaap0hm6yq6pbyvylgygd808if4q1z8k6"; depends=[]; }; funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; funneljoin = derive2 { name="funneljoin"; version="0.1.0"; sha256="17g1mvq9z5m29r0v2r2nn8980j515jamnpwvvnzj83vk84bz94rq"; depends=[broom dplyr glue magrittr purrr rlang tibble tidyr]; }; @@ -9018,10 +9391,10 @@ in with self; { funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; funrar = derive2 { name="funrar"; version="1.4.1"; sha256="0xqccch59f8cz4a7ybjdr6k625bir5nsjrp4iyfirrb877d17m5z"; depends=[cluster]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; - funtimes = derive2 { name="funtimes"; version="7.0"; sha256="0p0j9xsxz8fl4n0y6dchm0xr2gwc6v657wqx9qhbvb0r2wljizc6"; depends=[dbscan Jmisc Kendall Rdpack]; }; + funtimes = derive2 { name="funtimes"; version="8.1"; sha256="08vz05db6krrcppk0fd05n366isrqrmgwbp6y6c0n9rzbgav511k"; depends=[dbscan FNN igraph Jmisc Kendall Rdpack TDA]; }; furniture = derive2 { name="furniture"; version="1.9.10"; sha256="02dqs0b0vpn2chqhjylanq9xdrj2hw7ynd6xv94gkfk8syz3dqda"; depends=[dplyr knitr]; }; - furrr = derive2 { name="furrr"; version="0.2.2"; sha256="0kfd4hw1yn2mfxzjgiz4r6yi2vsp1j0wy5hdhzd6wha7vi9h7hg5"; depends=[ellipsis future globals lifecycle purrr rlang vctrs]; }; - fusedest = derive2 { name="fusedest"; version="1.3.1"; sha256="1nz5bkvn8y9f8h0ya6wblryg7bwj1vnz1vyqmd1hfr85bxfgl83c"; depends=[igraph Matrix Rcpp RcppEigen]; }; + furrr = derive2 { name="furrr"; version="0.2.3"; sha256="001p2yhznrpnrjvdcmf2h3wpgdnw01wnqgid7wbq8bhavhi3888a"; depends=[ellipsis future globals lifecycle purrr rlang vctrs]; }; + fusen = derive2 { name="fusen"; version="0.2.4"; sha256="1cbcr67y31xjcx9lqf1x1v6fb5lb1dfx89804ppaplya0xwpl81g"; depends=[attachment cli desc glue here magrittr parsermd rcmdcheck roxygen2 stringr tibble tidyr usethis]; }; fuser = derive2 { name="fuser"; version="1.0.1"; sha256="17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; fusionchartsR = derive2 { name="fusionchartsR"; version="0.0.2"; sha256="1g8vhdikrg8p5clvh9i2xg67b7zn1in0k4hw1s4rdbxsqx0pz6py"; depends=[caret htmlwidgets jsonlite magrittr pROC reshape2 shiny survival]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; @@ -9029,24 +9402,24 @@ in with self; { futile_options = derive2 { name="futile.options"; version="1.0.1"; sha256="0w15agpi88y3qkv6fl72zy2pzyplzgvnj41a4ixhg64mw1sck73s"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.4"; sha256="0zjb87brz7pkx3nq3q30y69cmcxpqqsra447p60qh7005kgr9vx4"; depends=[]; }; - future = derive2 { name="future"; version="1.21.0"; sha256="0bfiy17n5rghxw0702k0vgpjkk13268lniifdlx59flf0q16d7lh"; depends=[digest globals listenv parallelly]; }; - future_apply = derive2 { name="future.apply"; version="1.7.0"; sha256="1ns5cf80vyabvyz9qp6kpvkg4jycinn7x6v7x6692fgjapdnmyig"; depends=[future globals]; }; + future = derive2 { name="future"; version="1.22.1"; sha256="1kgdpfipnwi15wz2xvlfg3bmq424hhjzja5bks01v3phra2lmcl7"; depends=[digest globals listenv parallelly]; }; + future_apply = derive2 { name="future.apply"; version="1.8.1"; sha256="1ix61bfbk43pwnjb0wk8lkfgdsy5zi8svk74gar5nrl90b5w6nqd"; depends=[future globals]; }; future_batchtools = derive2 { name="future.batchtools"; version="0.10.0"; sha256="1ly98h2g7wpfxp2r8vl1hy7wqqgwgawjagz0m2iczjmcj4ix6avk"; depends=[batchtools future]; }; future_callr = derive2 { name="future.callr"; version="0.6.1"; sha256="037xgv604vrbdqx4zbai8nqd2d9cf47f0rwxd7iihr09y8qknd19"; depends=[callr future]; }; future_tests = derive2 { name="future.tests"; version="0.2.1"; sha256="1f75y7s9yrsz8c3vbsvp55zllp6sbpjrxbxknm1rfhg4sc2ak33c"; depends=[cli crayon future prettyunits sessioninfo]; }; futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; }; fuzzr = derive2 { name="fuzzr"; version="0.2.2"; sha256="1cwq7a5j6lzrlz9dw3hsfap988rh1kkgf03yni7c33zl69xp5w77"; depends=[assertthat progress purrr]; }; fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; - fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; }; + fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.4"; sha256="04841fh4nf7qriqk0b2ny943bji60bj42j8czg056d2dza4q4039"; depends=[]; }; fuzzySim = derive2 { name="fuzzySim"; version="3.0"; sha256="18h0lxzqyp7fzjv7vnyfbwpaxjx15sw0h9l5yq846xzhkza79xxp"; depends=[]; }; fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.8"; sha256="0sb7qia01a5h6p12riq6vdq9likmqb6i949axsxszy5sf1zk50v5"; depends=[doParallel foreach ggplot2 mvtnorm randomForest]; }; fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.6"; sha256="0s5rhqz8vih4za3a8k1k7i3gq8hj0w7bqnakw40k6mg87jvyzsj7"; depends=[dplyr geosphere purrr stringdist stringr tibble tidyr]; }; fuzzyreg = derive2 { name="fuzzyreg"; version="0.5.1"; sha256="19ppb1m655z3n7h4wcd5bwjciw4ynjbi883ki50mr5di3zy64n4r"; depends=[limSolve quadprog]; }; - fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.3"; sha256="1kbli1m44317m95a0r34vza9p27vd9ala05jrbrdkadninwdynal"; depends=[R6 reticulate]; }; + fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.5"; sha256="1g73xivxyh5fvppccgnxhgar6jsl6zsr2djkg0bhh10i633l56ia"; depends=[R6 reticulate]; }; fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; }; - fwildclusterboot = derive2 { name="fwildclusterboot"; version="0.3.4"; sha256="1y8ggspwjy1bnl0av876gvy61xfq39w5nhzkf0a993p5sfgxcgc2"; depends=[collapse dreamerr Formula generics gtools Matrix Matrix_utils Rcpp RcppEigen]; }; + fwildclusterboot = derive2 { name="fwildclusterboot"; version="0.3.7"; sha256="01spq04frksx9kkkcqpiq2w6spjyi2vzz701h9cw6i5x4inbl214"; depends=[collapse dreamerr Formula generics gtools Matrix Matrix_utils Rcpp RcppEigen]; }; fwsim = derive2 { name="fwsim"; version="0.3.4"; sha256="0fy87c1x5hihfcppv1pvk3b0pwl6ygqpka40x55gbpkgssdigb1l"; depends=[Rcpp]; }; - fxTWAPLS = derive2 { name="fxTWAPLS"; version="0.0.6"; sha256="14iipydpd3wjlmjq812k0vvjbsd8hi1mxz6fn0rrcrifz0q7g0x8"; depends=[doFuture foreach future geosphere ggplot2 MASS progressr]; }; + fxTWAPLS = derive2 { name="fxTWAPLS"; version="0.0.7"; sha256="0pfp64qi0mnxsf0pmgi5pafalzp997q6wx9fhkk04llzcj9ppdl8"; depends=[doFuture foreach future geosphere ggplot2 JOPS MASS progressr]; }; fxregime = derive2 { name="fxregime"; version="1.0-4"; sha256="0ml1q0xp90jfng6a60pfkp6j7wajk6pz4p4wm08rfqikgsdvp0m4"; depends=[car sandwich strucchange zoo]; }; fy = derive2 { name="fy"; version="0.3.0"; sha256="13803ld4b59ly5h3zlianag9901jyw6p70bsyz5dj7k62hg7ha3s"; depends=[data_table fastmatch hutils]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; @@ -9057,7 +9430,7 @@ in with self; { gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; gMCP = derive2 { name="gMCP"; version="0.8-15"; sha256="01048j9489rrhv9syqrbw4c5i5gsll41ysm27awxw6l1rshbqsqn"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; - gMOIP = derive2 { name="gMOIP"; version="1.4.6"; sha256="1pv61xcn7jh7347av4in1qsqxj1ddjyddmlx9pr8x0a6p96a5vfc"; depends=[dplyr geometry ggplot2 ggrepel MASS Matrix plyr png purrr Rfast rgl rlang sp tibble tidyr tidyselect]; }; + gMOIP = derive2 { name="gMOIP"; version="1.4.7"; sha256="1qg0ba3crky35l9qlcqg37bzrr9ilh8df1y110r2pqnkdns7ikj6"; depends=[dplyr geometry ggplot2 ggrepel MASS Matrix plyr png purrr Rfast rgl rlang sp tibble tidyr tidyselect]; }; gMWT = derive2 { name="gMWT"; version="1.1.1"; sha256="1vbw548fyrf012ry54p3gybdsil8c9llg2r9njhsiy7rb0gz2613"; depends=[clinfun Rcpp RcppArmadillo]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; gProfileR = derive2 { name="gProfileR"; version="0.7.0"; sha256="1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k"; depends=[plyr RCurl]; }; @@ -9070,7 +9443,7 @@ in with self; { gSeg = derive2 { name="gSeg"; version="1.0"; sha256="0lixlirisnxk29zlrragi3l8j1abb5cl7zh6vhx7l5hjdvh8ldq9"; depends=[]; }; gStream = derive2 { name="gStream"; version="0.2.0"; sha256="1f4xnbavm99yhjmaahazigps41mqlfvvl29kf4fs1yjqr531y36b"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; - gWQS = derive2 { name="gWQS"; version="3.0.3"; sha256="0hhbm846mscayb2217c01pm7652hbh2pzm0mfgjh3l6yjdbsi8ky"; depends=[broom cowplot future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC pscl reshape2 rlist]; }; + gWQS = derive2 { name="gWQS"; version="3.0.4"; sha256="1yhbcmznii3n2sbw0z2rw1sdn0zlk5v2z7ww3nl7rn005g4q04hi"; depends=[broom cowplot dplyr future future_apply ggplot2 ggrepel kableExtra knitr MASS Matrix nnet plotROC pscl reshape2 rlist]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-8"; sha256="0p6lav6lrwgsw29sl8vshzgi8j2smcavx047qq31s9bsn2dcw58n"; depends=[digest]; }; gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-6"; sha256="0arh0yxx63m4df1ccrv0q3vkjncwv3ink8vkalp6ashi2932yfma"; depends=[digest gWidgets2 memoise]; }; @@ -9079,22 +9452,23 @@ in with self; { gaiah = derive2 { name="gaiah"; version="0.0.4"; sha256="1ibsbmmpagr7ix1c3bszrglqx95w44qyfy80vcq3w2dprs8vrrw6"; depends=[dplyr geosphere magrittr maptools raster rlang sp]; }; gainML = derive2 { name="gainML"; version="0.1.0"; sha256="1mqhrdjdmc2n7dxilxkqn6xq7z0qnxpigw5bbffnjvvsmdamah0n"; depends=[fields FNN]; }; gains = derive2 { name="gains"; version="1.2"; sha256="1nmrhc7qjlyzn04r1qyjdws5fin3idmi789kbxzilax12ya8xr7k"; depends=[]; }; - galah = derive2 { name="galah"; version="1.0.0"; sha256="0y2a6p95xa352s6s8nq56m5wadkvrh7ikd5sc0bs3nprf58p1vxb"; depends=[assertthat crul data_table digest httr jsonlite sf sp stringr wellknown]; }; + galah = derive2 { name="galah"; version="1.3.1"; sha256="1z7kwmpmsr7fy9x3z6bivx0vvfrb9k5lgvcdnj3z46hi2vn6i8xn"; depends=[assertthat crul data_table data_tree digest httr jsonlite sf sp stringr wellknown]; }; + galigor = derive2 { name="galigor"; version="0.2.5"; sha256="1lfw1kikf90nv9g0xrb656fbilmxdk64zrzi43wrz7y2y55sd5xv"; depends=[cli crayon dplyr gargle getProxy magrittr purrr rappsflyer rfacebookstat rgoogleads rmytarget rstudioapi rvkstat ryandexdirect rym tibble tidyr]; }; galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; - galvanizer = derive2 { name="galvanizer"; version="0.5.1"; sha256="1f64vkdmklaga7jqqpcmpfcvv3kg9hyvpwm2y91njjgvcfxhb00s"; depends=[dplyr httr jsonlite lubridate magrittr rlang tibble tidyjson tidyr tidyselect]; }; + galvanizer = derive2 { name="galvanizer"; version="0.5.3"; sha256="1b9431mmgpqyd49b8nlsrlxjq9j9fyj73226bi9jic1p867533kk"; depends=[dplyr httr jsonlite lubridate magrittr rlang tibble tidyjson tidyr tidyselect]; }; gam = derive2 { name="gam"; version="1.20"; sha256="1zhy2fp7pxac8xp3z3hndhprj4s5gx3305b627vc78bal1ml3swi"; depends=[foreach]; }; gamCopula = derive2 { name="gamCopula"; version="0.0-7"; sha256="0zi9g2vxkn1hxc2qyyr1x8p1f9w7fc1j5dmm2mmm333gixkkz9nb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; gamRR = derive2 { name="gamRR"; version="0.7.0"; sha256="0zn8921a4i1lz5wpdfbd72pqb25r12abyqw7y2w53kfhdzs57f3l"; depends=[boot mgcv]; }; - gama = derive2 { name="gama"; version="1.0.3"; sha256="1k79m01r3y9am62414947zfwb1w1gh0nn48najivbjyk9i2avn9r"; depends=[cluster clusterCrit GA ggplot2 NbClust Rfast]; }; gamair = derive2 { name="gamair"; version="1.0-2"; sha256="1cjrd576l9md1jb1fc1y6iay5y49i0d8by024qsc7yik6f6mdl13"; depends=[]; }; gambin = derive2 { name="gambin"; version="2.5.0"; sha256="137z6dxrvf05ss9bqh96bsl8rm6gzpk7kdgnfqh355mn0m5h2zx6"; depends=[doParallel foreach gtools]; }; + gamblers_ruin_gameplay = derive2 { name="gamblers.ruin.gameplay"; version="4.0.5"; sha256="0h5sfjs2lzs3cfx7q0agq68x4hhqmkiqga04c1gvnzwn8k7i8svc"; depends=[gganimate ggplot2 hrbrthemes viridis]; }; gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-5"; sha256="1qlcsfv9k9aydv2bdfmbrilxfcmp3nzixnlr59k8idg1f7ph04cl"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; gamclass = derive2 { name="gamclass"; version="0.62.3"; sha256="0i2nynl4b46rdl8f2zashcg0dvlhcq9paq8hx5y40xpxm8iljqab"; depends=[lattice latticeExtra randomForest rpart]; }; gameofthrones = derive2 { name="gameofthrones"; version="1.0.2"; sha256="10ns4yl1s8adlf334gl8yararj1fpxbg3gy7h69s554m4h878awk"; depends=[ggplot2 gridExtra MASS]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamesGA = derive2 { name="gamesGA"; version="1.1.3.7"; sha256="0km0z2haqgykl01xkzsbkpwibavgqfjygx7cg08ni68gw501689l"; depends=[shiny]; }; - gamlr = derive2 { name="gamlr"; version="1.13-6"; sha256="1b2vpqwr63nh3slpm3ha8w2mxnzhg5yv8f5afja58k9db77kciad"; depends=[Matrix]; }; + gamlr = derive2 { name="gamlr"; version="1.13-7"; sha256="0p0q77lkb5j9p1gd2z1n74pphx7h0lynzdamxrhz2w6bif1431wz"; depends=[Matrix]; }; gamlss = derive2 { name="gamlss"; version="5.3-4"; sha256="06mh00jjxnqwknbv777hawjk0zm81ixrp35fg59mrlqz8y3p2w3j"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; gamlss_add = derive2 { name="gamlss.add"; version="5.1-6"; sha256="0g80bn0nszs2nmka6dypyvqnsgxp7mzhf5nd82n5x4jm3ca3dbdj"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="5.0-1"; sha256="1s83dgifidvc6cbrqirwlvwfzg08mlhmxxiqkbmnsy09i5j9fzd3"; depends=[gamlss gamlss_dist survival]; }; @@ -9102,9 +9476,8 @@ in with self; { gamlss_data = derive2 { name="gamlss.data"; version="6.0-1"; sha256="1cjb2n5i5mnhmb5qbqycdbfg65j7nxb9s74yihqs9kpa39byrzcq"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; gamlss_dist = derive2 { name="gamlss.dist"; version="5.3-2"; sha256="1lyf2rvkplywgyhcni93k52z3b89vv86yrgl38dx3ln3436r5ahc"; depends=[MASS]; }; - gamlss_foreach = derive2 { name="gamlss.foreach"; version="1.0-5"; sha256="073wdjj9cpr9vm774alap1w5v7akdyj4imy24mgr5nwj4028xdva"; depends=[doParallel foreach gamlss gamlss_data gamlss_dist glmnet]; }; gamlss_inf = derive2 { name="gamlss.inf"; version="1.0-1"; sha256="0m091zxjm5wvhm6mzbpzkr275n3qnlb3v4099k0a1jymahk4w7vr"; depends=[gamlss gamlss_dist]; }; - gamlss_lasso = derive2 { name="gamlss.lasso"; version="1.0-0"; sha256="089bcwyyk5pj9k46lmwi4m03aw35pdr9dr3n5kbwjbp72g7s0dyz"; depends=[gamlss glmnet lars Matrix]; }; + gamlss_lasso = derive2 { name="gamlss.lasso"; version="1.0-1"; sha256="03c8k6hl23ag98dihznfz1h0qc3pwxbnpv58pvmx3xbb3lipfjfb"; depends=[gamlss glmnet lars Matrix]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="6.0-0"; sha256="0b06nb6nq36ay0p5z57j5d4hrly5917wcsal7986mp1270iwnpip"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; gamlss_spatial = derive2 { name="gamlss.spatial"; version="2.0.0"; sha256="1pgmlc6i7p5mjb1pc7b861yjl2gwr37bbzj3j2dl0qzybrs742mx"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; }; @@ -9116,25 +9489,26 @@ in with self; { gamma = derive2 { name="gamma"; version="1.0.1"; sha256="1m2wxqprfxb51fih5f9l4s0lk42gyglbgvhfxc0cm9n7pn3dhprl"; depends=[ggplot2 IsoplotR rlang rxylib]; }; gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; gamsel = derive2 { name="gamsel"; version="1.8-1"; sha256="107hbshi36dcyykhy6w1i1ih84xwdqv1q3nad73d3krf7bhvhg5f"; depends=[foreach mda]; }; - ganGenerativeData = derive2 { name="ganGenerativeData"; version="1.1"; sha256="1dbbsymc6085z9avgzjrylci0xfcy4zw04186vmn4vg4khjqfv31"; depends=[Rcpp tensorflow]; }; + ganGenerativeData = derive2 { name="ganGenerativeData"; version="1.1.1"; sha256="0i30xa5l9p1pznzc2i3kk3ysx0pffgbz6w4gyj3x55sf0h4vphx5"; depends=[Rcpp tensorflow]; }; ganalytics = derive2 { name="ganalytics"; version="0.10.7"; sha256="03jf7325cgg5p6lzcrzzzx0b40vf3l5vhw95lih098kpmlr1zadf"; depends=[assertthat googleAnalyticsR httpuv httr jsonlite lazyeval lubridate plyr R6 rvest scales selectr stringr tibble XML xml2]; }; gap = derive2 { name="gap"; version="1.2.3-1"; sha256="1rw93dnv3id64al46iybyznnvprv871qa4lnwdx18x8ym66fafil"; depends=[]; }; gap_datasets = derive2 { name="gap.datasets"; version="0.0.4"; sha256="1zlxm3nh1b1mqb94fq2b7sc7v99m9ywz7bz9lz5bhwblk5fzmjii"; depends=[]; }; + gapclosing = derive2 { name="gapclosing"; version="1.0.1"; sha256="11c3y5l4ybyvjrmyb2xn37zxjknri8qi7xf2vs47ki1cvmvfq28a"; depends=[doParallel dplyr forcats foreach ggplot2 glmnet gridExtra magrittr mgcv ranger Rdpack tidyr tidyselect]; }; gapfill = derive2 { name="gapfill"; version="0.9.6-1"; sha256="15mrn44v5l4sgxwlyp1rik5mdg7m2s6xxcdigc3sjd1yhxalgw12"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.1.0"; sha256="04dz7ns7xsa0q0v7sllaqlhk4mis8gvqzr2a1y4fiiqrk7337gmm"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; garchmodels = derive2 { name="garchmodels"; version="0.1.1"; sha256="1nmhsxhfbp7jn85jwnhm4p5kl0jc5n1bjwwwpia774ycr6krazwn"; depends=[dials dplyr magrittr parsnip purrr rlang rmgarch rugarch stringr tibble tidyr]; }; - garchx = derive2 { name="garchx"; version="1.2"; sha256="10z9kb80bcma3s54cp6r2c4v247ydf7fay3lb8hnqwcc5df76c6g"; depends=[zoo]; }; - gargle = derive2 { name="gargle"; version="1.1.0"; sha256="03y29dzz54bw9px5k8a72vmc000lcyrkc5l0izkqcciyi9ijkr3w"; depends=[cli fs glue httr jsonlite rappdirs rlang rstudioapi withr]; }; + garchx = derive2 { name="garchx"; version="1.3"; sha256="0fpanzl6nfq6dar5chmqqfndb3w01mcypkhj0ya6v3d77m02b5mf"; depends=[zoo]; }; + gargle = derive2 { name="gargle"; version="1.2.0"; sha256="0fypj70c1fjmvs57birik76wfx8a2fs4gzicbb52k57i6clwlijd"; depends=[cli fs glue httr jsonlite rappdirs rlang rstudioapi withr]; }; gargoyle = derive2 { name="gargoyle"; version="0.0.1"; sha256="0lsjplfrc047lb3zjfsc8wl47kll7d85v824k7zlr0n34xbbypq7"; depends=[attempt shiny]; }; - garma = derive2 { name="garma"; version="0.9.7"; sha256="02jqlhafq6myk7v44cs0d34v30mjmh9bgq9a1arsrqi9ckk4g5ri"; depends=[BB crayon dfoptim FKF forecast GA ggplot2 lubridate nloptr pracma pso Rsolnp signal tswge zoo]; }; + garma = derive2 { name="garma"; version="0.9.8"; sha256="07c0pv8dpp0ll6zxx4k60r47nfx7i3iv1ygjq5vvb3had9hcad0f"; depends=[BB crayon dfoptim FKF forecast GA ggplot2 lubridate nloptr pracma pso Rsolnp signal tswge zoo]; }; garray = derive2 { name="garray"; version="1.1.2"; sha256="0s2dgi556x9jnhafvzz4qkxdbq9dm12gsvsqd2g9iy3468fx9flq"; depends=[]; }; gaselect = derive2 { name="gaselect"; version="1.0.9"; sha256="089gyllcmq5rgf5yffclifc7rc8rmq4wk1dhznigxkij4zap67hx"; depends=[Rcpp RcppArmadillo]; }; gasfluxes = derive2 { name="gasfluxes"; version="0.4-4"; sha256="0gi0zk0h5rw75n6znada0cwa9qzy8higsiiqwgdm3q827j1x8iva"; depends=[AICcmodavg data_table MASS sfsmisc]; }; gasper = derive2 { name="gasper"; version="1.1.1"; sha256="10kl5d8lm2jvqrfk0qliyb3afmk9bhjm5zvs4g31zpa3icbz9r2p"; depends=[ggplot2 Matrix Rcpp RcppArmadillo RSpectra]; }; gastempt = derive2 { name="gastempt"; version="0.5.4"; sha256="02b35y0sq0piq5p8k5fviymqyqx1c2k793pm7j79xymmpzf8f52r"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen RcppParallel rstan shiny StanHeaders stringr tibble utf8]; }; gaston = derive2 { name="gaston"; version="1.5.7"; sha256="14z94dpln4dvgrv2w7w9ik7h6rpvbf02qhq1hqzx8c2cndzxr21i"; depends=[Rcpp RcppEigen RcppParallel]; }; - gateR = derive2 { name="gateR"; version="0.1.8"; sha256="0m7qgvks7z5dm9in21ll6ia9ilcpqrnn6mcnm4h7y0qnpixh9wz6"; depends=[fields lifecycle raster sparr SpatialPack spatstat spatstat_core spatstat_geom spatstat_linnet tibble]; }; + gateR = derive2 { name="gateR"; version="0.1.9"; sha256="18q3bqjjzvrp20mdksps0ddjdz4i8crh26iirradiss4xphk0gm3"; depends=[fields lifecycle raster rlang sparr SpatialPack spatstat spatstat_core spatstat_geom spatstat_linnet tibble]; }; gatepoints = derive2 { name="gatepoints"; version="0.1.4"; sha256="0gwyrkxn4xd79cl60xa312k6nz17mdjdiym65dq7s2384fa80wbm"; depends=[]; }; gauseR = derive2 { name="gauseR"; version="1.0"; sha256="125jjd7s9wkx93isgrr3d6bkdmdf1x7000pbj9y634wd1jx8akgd"; depends=[deSolve]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; @@ -9142,7 +9516,7 @@ in with self; { gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; gaussplotR = derive2 { name="gaussplotR"; version="0.2.5"; sha256="0amkgzgh6764ri30210nhbi3wcll3248fmkpclx010dxc3hllfdx"; depends=[ggplot2 metR rgl viridisLite]; }; gaussquad = derive2 { name="gaussquad"; version="1.0-2"; sha256="0bcvkssmwwngcd4cnv924n9h3c8z1w3x9c9bkwn5jbz9zyv1lfms"; depends=[orthopolynom polynom]; }; - gawdis = derive2 { name="gawdis"; version="0.1.2"; sha256="0x9g8949ik4065l46k3lssnyadk0wyw816skpfqg0nv8z4hq77cz"; depends=[FD GA]; }; + gawdis = derive2 { name="gawdis"; version="0.1.3"; sha256="1zrz9pms7yb80g276vwl57id61bhvcm9ni6da0ii1cxrhr5nvlkk"; depends=[FD GA]; }; gazepath = derive2 { name="gazepath"; version="1.3"; sha256="1sv0vdwzmvpnj2k8lphnf4y12fi5md0j2725fjkv1n7a3dkd6faa"; depends=[jpeg scales shiny sp zoo]; }; gb = derive2 { name="gb"; version="2.3.3"; sha256="0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh"; depends=[boot KernSmooth]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; @@ -9155,7 +9529,8 @@ in with self; { gbs2ploidy = derive2 { name="gbs2ploidy"; version="1.0"; sha256="0gdjfqs9ccyaw7vi22wbyc742n1badr5ypr08g6rvi8ka5lmx836"; depends=[MASS rjags]; }; gbts = derive2 { name="gbts"; version="1.2.0"; sha256="1v8x4dnja8va28rjznyqa6js9wazndijasb95lfj2qwhxhgf5h65"; depends=[doParallel doRNG earth foreach gbm]; }; gbutils = derive2 { name="gbutils"; version="0.4-0"; sha256="01ka10k599c8q7l55jzkrvqlxhzdanc4xnmsh6js5ji5yr7v385f"; depends=[Rdpack]; }; - gcKrig = derive2 { name="gcKrig"; version="1.1.4"; sha256="1dis2afkwdfziab8a8y8h4r692kb2pkmq8lbpgb6z4ygvhgr38kj"; depends=[Rcpp RcppArmadillo]; }; + gcKrig = derive2 { name="gcKrig"; version="1.1.6"; sha256="0812qqqvd4rx6vpj23cp11nipflvz5dykc5bpb0sp453mk1d1vqf"; depends=[Rcpp RcppArmadillo]; }; + gcTensor = derive2 { name="gcTensor"; version="0.99.0"; sha256="0fd4jarqbd35pccgbiyf363snzagyxg0bp9yss3r741f2pmgh41j"; depends=[einsum rTensor]; }; gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; }; gcdnet = derive2 { name="gcdnet"; version="1.0.5"; sha256="159dl8v1n7s9wnfrjb6f0b3ssblkqgbfzs15vjxhc8xkz0jp9z1c"; depends=[Matrix]; }; gcerisk = derive2 { name="gcerisk"; version="19.05.24"; sha256="1dn3x9afb6lwys5adi621s6357s66lsif5zv64ilxmckmy2j71zl"; depends=[cmprsk ggplot2 survival]; }; @@ -9167,19 +9542,20 @@ in with self; { gcookbook = derive2 { name="gcookbook"; version="2.0"; sha256="11g1q187l4j31b6cdzdx5z3s14z3s09l7ynl36pzzn9j19l8cmrc"; depends=[]; }; gdalUtilities = derive2 { name="gdalUtilities"; version="1.1.2"; sha256="1vw30gnmn3vrghm3n0yqs5swz7a3d07n0zd5flgiqrlya35hlhsc"; depends=[raster sf]; }; gdalUtils = derive2 { name="gdalUtils"; version="2.0.3.2"; sha256="0krapdy50nd5dvcdflz39dzxpig3zklng3hgxavqg2nvwazalvsc"; depends=[foreach R_utils raster rgdal sp]; }; - gdalcubes = derive2 { name="gdalcubes"; version="0.3.1"; sha256="0yng7ixfwyry8f6v6zdkd1f1z8ac35n7mxwyb8ngrkb5jd6h2mcc"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; + gdalcubes = derive2 { name="gdalcubes"; version="0.4.1"; sha256="1sckd2sqcf0fklr8qdwkalri3xdagrhxd0bw3jisb2wqwvdxjjzw"; depends=[jsonlite ncdf4 Rcpp RcppProgress]; }; gdata = derive2 { name="gdata"; version="2.18.0"; sha256="0zwdj7lscgxr8r62ii8hbdh4mb7sa9w4f5nv32zzrxdvymcpya2b"; depends=[gtools]; }; gde = derive2 { name="gde"; version="0.1.4"; sha256="1ypax1gwi8f9fkfmbm5qb845b70ch44m19rw8spi34fn3yrbb17l"; depends=[data_table DBI dplyr DT ggplot2 httr jsonlite leaflet odbc progress R_utils readr rgbif shiny shinycssloaders shinyWidgets stringr XML]; }; - gdiff = derive2 { name="gdiff"; version="0.2-1"; sha256="11p3xx0gmqfjyl08znmnganhif0zi1c5kbbv9qkqayjbi3j79z86"; depends=[magick pdftools]; }; + gdiff = derive2 { name="gdiff"; version="0.2-2"; sha256="0hg9mf3qyg19wwpiv3lz2z1000jw73s2pwb8y8hjgpv69wwsskfi"; depends=[magick pdftools]; }; gdistance = derive2 { name="gdistance"; version="1.3-6"; sha256="093a29yb544gxldwxgkyfc9bhmz3by0pknnj1c666i6gz2rbxjic"; depends=[igraph Matrix raster sp]; }; gdm = derive2 { name="gdm"; version="1.4.2.2"; sha256="0s81d8d7i95nvpfnppnwgg8raj9388a725j8hxjzgzqvypdlhx8p"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; gdmp = derive2 { name="gdmp"; version="0.2.0"; sha256="0fy8x9l6swrb78apwq9d9msz2y8dkfd2fkyp1pkmzxwdb85lmcdm"; depends=[]; }; gdns = derive2 { name="gdns"; version="0.5.0"; sha256="1bicimkxsyfg9yqaikapwlv8x9xdvsb00fqnfka07i6b63109sxh"; depends=[httr jsonlite magrittr stringi tinytest]; }; gdpc = derive2 { name="gdpc"; version="1.1.2"; sha256="0g1mnxm78n928g7qjf0w7jzfm27z6mvz5p1rm25mxv7wsif5m6s6"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; - gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; + gds = derive2 { name="gds"; version="0.1.1"; sha256="0gwq0k80rnbg4ibz6dz8sk6hqaklrdbv4vzv8zyk74am3aqipn20"; depends=[]; }; gdtools = derive2 { name="gdtools"; version="0.2.3"; sha256="1p3ip0qwpg8f63jfx0b8vbac6l20ddid8xvxzkfi6i858pybnawp"; depends=[Rcpp systemfonts]; }; gdxdt = derive2 { name="gdxdt"; version="0.1.0"; sha256="1yrjixq4srmaiy5iaprix4096yhf3ldyklgjag4kxd3l5acwap4h"; depends=[data_table]; }; gear = derive2 { name="gear"; version="0.3.4"; sha256="0ibn2kr0rjj546cbcqhr6x69s25xh7si5fri59055j42g62mdnxy"; depends=[autoimage optimx Rcpp]; }; + geckor = derive2 { name="geckor"; version="0.1.1"; sha256="0rhhj6z8az8d3r94xvnjlvz9frjkaah2047h9gcycfplx3ripf0y"; depends=[dplyr httr jsonlite knitr lifecycle magrittr rlang tibble tidyr tidyselect]; }; gee = derive2 { name="gee"; version="4.13-20"; sha256="167pzgnmj4cjc41ykps1mfwi6s7y32zxyycn5z17vn4v0pp4q0ak"; depends=[]; }; geeCRT = derive2 { name="geeCRT"; version="0.1.0"; sha256="08p9nqzhrbzbkwhld7w49rgw363bswg8isqali3m04m7g76d7qfd"; depends=[MASS mvtnorm rootSolve]; }; geeM = derive2 { name="geeM"; version="0.10.1"; sha256="1r9zyjv7r7r7avdqi54dvczf971frz8pgrs1a04kan5mh4ls6xpy"; depends=[Matrix]; }; @@ -9193,11 +9569,12 @@ in with self; { gemlog = derive2 { name="gemlog"; version="0.41"; sha256="16pdhpx21avxjrawj7i47dxzz2wfhabzz5x3nln2pwaz5b147syz"; depends=[signal]; }; gemma2 = derive2 { name="gemma2"; version="0.1.3"; sha256="1l5axji33abrkm2b32ziilhfqssbq4ypv7kimd16fak6xjz50m0k"; depends=[Matrix]; }; gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; - gemtc = derive2 { name="gemtc"; version="1.0-0"; sha256="0936c803krichs4x6dyrz8rn2v7d19nkx0wfhibkcjv4irhpggvx"; depends=[coda forcats igraph meta plyr Rglpk rjags truncnorm]; }; + gemtc = derive2 { name="gemtc"; version="1.0-1"; sha256="150892ybxkci8frnjj070qzc1sqx5a9ba2r6n8mii12hgrz4h1vm"; depends=[coda forcats igraph meta plyr Rglpk rjags truncnorm]; }; gen2stage = derive2 { name="gen2stage"; version="1.0"; sha256="16xbzgkjskzm1wik3dznvwhqddrpmcgsgd372n4a67rbb46jgx6r"; depends=[clinfun]; }; - gen3sis = derive2 { name="gen3sis"; version="1.2"; sha256="0fkcgicyr1ahsgpnmfz6pwppbxzx5yaiswgb5nk4djxla3qf10k2"; depends=[BH gdistance Matrix raster Rcpp sp stringr]; }; + gen3sis = derive2 { name="gen3sis"; version="1.3"; sha256="1s0214a0fp356fw0mqlddlgsqpw4prkkfhrzdkqkv3nqswcx1x08"; depends=[BH gdistance Matrix raster Rcpp sp stringr]; }; gen5helper = derive2 { name="gen5helper"; version="1.0.1"; sha256="0z7hisn57md18vcfb6f44hy6zzp9dirrjyxi4x1id3mqa3mligb6"; depends=[dplyr ggplot2 minpack_lm naturalsort plyr pracma rlang tidyr]; }; genBaRcode = derive2 { name="genBaRcode"; version="1.2.4"; sha256="1y7rq2fvv2s7x054ribp2x6vsp8dh49dm43rhn9cp2fn4qf05f7r"; depends=[ape Biostrings dplyr futile_logger future future_apply ggnetwork ggplot2 ggraph ggseqlogo ggtree igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist VennDiagram visNetwork]; }; + genSEIR = derive2 { name="genSEIR"; version="0.1.1"; sha256="02lprxxpf7ll23habq05b6slgbh978k09sqr6myr2jhlax2snxvk"; depends=[ggplot2 minpack_lm nlsr pracma]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; genTS = derive2 { name="genTS"; version="0.1.3"; sha256="1ky8h8yzqfkb91ny9z08gr7irzvjqr1b42k89ahcrmk458hjwgqr"; depends=[shiny]; }; genalg = derive2 { name="genalg"; version="0.2.0"; sha256="1wzfamq8k5yhwbdx0wy1w5bks93brj0p890xxc4yqrja4w38ja3s"; depends=[]; }; @@ -9212,6 +9589,7 @@ in with self; { geneListPie = derive2 { name="geneListPie"; version="1.0"; sha256="0z2gawfzhm05dafj4zlj6ifmf0dy7p1hrpa59lzxrnrc0wr6laji"; depends=[]; }; geneNetBP = derive2 { name="geneNetBP"; version="2.0.1"; sha256="0sp1chyln5k2zsq7cdhvrqxwr2nhrll1pdl1l5g6fd4gjl2m1nwk"; depends=[bnlearn ggm gRain graph igraph Rgraphviz scales]; }; geneSignatureFinder = derive2 { name="geneSignatureFinder"; version="2014.02.17"; sha256="1s9jj87wnzzgm9hnws09yhrxdlb6jw56i3ddwznvmh8vpzrspv4h"; depends=[class cluster survival]; }; + genekitr = derive2 { name="genekitr"; version="0.2.1"; sha256="1xns8sq535w47l0pxja35pxgp4a5x0vnnyprmd363fi5ls9rwbi5"; depends=[clusterProfiler dplyr ggplot2 stringi stringr tibble tidyr VennDiagram]; }; genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; genepop = derive2 { name="genepop"; version="1.1.7"; sha256="0b36nspq3kkad52k0viw1pdsf7h9h5ivi0ix7zg8i0z7vkhnm0cy"; depends=[Rcpp RcppProgress stringr]; }; @@ -9221,11 +9599,12 @@ in with self; { generics = derive2 { name="generics"; version="0.1.0"; sha256="0qw7r0d2qvlj1pvrlpv30d6akml624ydxkk19hv85iv6pfyx2wdb"; depends=[]; }; genero = derive2 { name="genero"; version="0.1.0"; sha256="0akwwy5xbh7s40v8dr1zr7jfglv0iyh4zn0sb0rnz4r57qr6nh8w"; depends=[]; }; genesysr = derive2 { name="genesysr"; version="1.0.0"; sha256="05jp8z7313r5wi9a5yw7fh198l7nd2ywzwg4f23yp4kfrkkgawn5"; depends=[dplyr httr jsonlite]; }; + geneticae = derive2 { name="geneticae"; version="0.1.0"; sha256="0d37g33xkaym49zq6aqv4xj40hm25qbr7y080vka8nid7n29y7f7"; depends=[agridat bcv calibrate dplyr GGEBiplots ggforce ggplot2 MASS matrixStats missMDA pcaMethods prettydoc reshape2 rrcov scales tidyr]; }; genetics = derive2 { name="genetics"; version="1.3.8.1.3"; sha256="0lljxvz7nc6y2z303icphar2niir0i407w5cyhy2pwspd9gwkwpy"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.5"; sha256="07w6rf4a3d34j7dwz9zcxshg2sk1cd5v59xs3jxph17c9gga0nlq"; depends=[genieclust Rcpp]; }; genieclust = derive2 { name="genieclust"; version="1.0.0"; sha256="1gbbblr5yv686llych5cj9jc8vc57y53qknzld5z51za9aw6azn3"; depends=[Rcpp]; }; - genio = derive2 { name="genio"; version="1.0.12"; sha256="15v9hdnb1jknbvflvgyyhcx0cqjn3v9zl66mswk59j56qm58bkr9"; depends=[Rcpp readr tibble]; }; - genius = derive2 { name="genius"; version="2.2.2"; sha256="1nan192mbnp9n9j3ccqrg6qzz5rmxj537v031kn1802yiakz79m9"; depends=[dplyr purrr readr reshape2 rlang rvest stringr tibble tidyr tidytext]; }; + genio = derive2 { name="genio"; version="1.0.25"; sha256="18vgqldk3ng3rpn7wkhhmjzi5nq7lzf2pkynzsg7bqaw120klhbw"; depends=[dplyr Rcpp readr tibble]; }; + genius = derive2 { name="genius"; version="2.2.3"; sha256="03j6yry39nn8bccrnwjx1y36rdw167gjlkzl56g5lqwbrgx26bqy"; depends=[dplyr magrittr purrr reshape2 rlang rvest stringr tibble tidyr tidytext]; }; geniusr = derive2 { name="geniusr"; version="1.2.0"; sha256="04h0a61ngs0cmjf23imx76bm82dzkp4q4j31h3xlic05dx2lvyan"; depends=[curl dplyr httr purrr rvest stringr tibble xml2]; }; genlasso = derive2 { name="genlasso"; version="1.5"; sha256="07f0gqvngiyd3x01qxbqz7xrz10ck1cbypp51ldg8lg8ln1zw76y"; depends=[igraph Matrix]; }; genlogis = derive2 { name="genlogis"; version="1.0.0"; sha256="01av5invhviii7adqihh10ib47rjzwfsqdgw3lfg1c72kzrqywgr"; depends=[distr doParallel foreach ggplot2 manipulate]; }; @@ -9235,8 +9614,9 @@ in with self; { genogeographer = derive2 { name="genogeographer"; version="0.1.19"; sha256="0q56ysv5333i27iv1gmd9ilbgn3rw8sb9yq7z76gmn1fak5aqci8"; depends=[dplyr DT forcats ggplot2 knitr leaflet magrittr maps purrr readr rio rlang rmarkdown shiny shinycssloaders shinyjs shinyWidgets tibble tidyr]; }; genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; }; genomic_autocorr = derive2 { name="genomic.autocorr"; version="1.0-1"; sha256="1lidrjz1flxw4jvhqdi8y813m7ss4kkvm7bxsdpz60dxxw3204gm"; depends=[data_table magrittr reshape]; }; + genomicper = derive2 { name="genomicper"; version="1.7"; sha256="1sran9gjjkrq9yxv4630cyhjhm9w9cggyx3amhcncmyiknz6pa76"; depends=[AnnotationDbi DBI reactome_db]; }; genotypeR = derive2 { name="genotypeR"; version="0.0.1.8"; sha256="1kwzjn6hrnfizs44cz4a8qa4mdhdzqssc4axx0s6vngmkmsrffig"; depends=[colorspace doBy plyr reshape2 zoo]; }; - genpathmox = derive2 { name="genpathmox"; version="0.6"; sha256="0fdxh0fwig711fpd6vlzdi1d3klyazanry4gnxlzx8byg9kzcz7q"; depends=[diagram quantreg]; }; + genpathmox = derive2 { name="genpathmox"; version="0.7"; sha256="15kghaslkrv47by16wzc4m46gq3zawmbrpl7nk0r3gmqs42sfcw2"; depends=[diagram quantreg]; }; genpwr = derive2 { name="genpwr"; version="1.0.4"; sha256="0cys4zmfq07g99xywqampvmn8g0a6bjjj368d62q5xki2mi9z649"; depends=[ggplot2 MASS nleqslv]; }; genridge = derive2 { name="genridge"; version="0.6.7"; sha256="07mdkkq4j8i5x8d4yfsp2rfpf7gkcgdcsw9b2ng5f7gdnblrw0dr"; depends=[car]; }; genscore = derive2 { name="genscore"; version="1.0.2"; sha256="0i1wg65cpyc7x1h8dbq0i6q8979lw15zhmn7zn1r8gj3nxl7my0b"; depends=[mvtnorm Rdpack stringr tmvtnorm]; }; @@ -9247,23 +9627,23 @@ in with self; { geoFKF = derive2 { name="geoFKF"; version="0.1.0"; sha256="0fapxfckyhgs1lzaviicnrhmjzdlkxfg2ccn46zcrybqq995g9js"; depends=[numDeriv Rcpp RcppArmadillo]; }; geoGAM = derive2 { name="geoGAM"; version="0.1-2"; sha256="0q09pk2npn4hjymklwfrhz2ybmjpcb6kvqkpn9l3a6cdjgk6bkmj"; depends=[grpreg MASS mboost mgcv]; }; geoR = derive2 { name="geoR"; version="1.8-1"; sha256="1lvgkpvv4a05lsb1dgphpv733lxbpcj7p2bj1yjjbfch8n04f1lr"; depends=[MASS RandomFields sp splancs]; }; - geoSpectral = derive2 { name="geoSpectral"; version="0.17.5"; sha256="0bw8mv1kq27hql37zcalz3zjj57bhs7g724wfpvzav2rlzvs8n7f"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; + geoSAE = derive2 { name="geoSAE"; version="0.1.0"; sha256="16fkai95cqwxkylpk1gddyzja80036ghfb4ps3rz1vbbqzhg01x8"; depends=[MASS nlme]; }; geoTS = derive2 { name="geoTS"; version="0.1.3"; sha256="12v50r2ym3nb21sskq7h4xsk6nzci06l9iync2ny91iwl7c9nrjc"; depends=[doParallel ff foreach iterators raster sp]; }; - geobr = derive2 { name="geobr"; version="1.6.1"; sha256="0cc2bbm13rc7323bd1n8723fz0hjaic199dnd2lny9fzv87ibw5q"; depends=[curl data_table httr readr sf]; }; + geobr = derive2 { name="geobr"; version="1.6.4"; sha256="0ipihd4v0x2irx1kwryjh52c0yrpdcx67qvv2xck5c4ka51j33sb"; depends=[crul curl data_table httr readr sf]; }; geocacheR = derive2 { name="geocacheR"; version="0.1.0"; sha256="04ckxmird6n179xvsx50cjdz046igjxxqdnz5pfxi8pdklnky20c"; depends=[dplyr magrittr stringr threewords tibble]; }; - geocmeans = derive2 { name="geocmeans"; version="0.1.1"; sha256="0d9di8wd05k2dppfn0089l4g289vrzcayws54q992j8qn9phhb2r"; depends=[broom dplyr fclust fmsb future_apply ggplot2 progressr reldist reshape2 sp spdep]; }; + geocmeans = derive2 { name="geocmeans"; version="0.2.0"; sha256="1m1wvhrqpr0sav0v3qpj8kymdr52gfcjv18hshd4kaj309qpq8yl"; depends=[dplyr fclust fmsb future_apply ggplot2 leaflet matrixStats plotly progressr raster Rcpp RcppArmadillo Rdpack reldist reshape2 rgdal rgeos shiny sp spdep]; }; geodaData = derive2 { name="geodaData"; version="0.1.0"; sha256="003m5wff0q4fdlg64qispmhj2aw83isxg3ijxwkwhvi33bpwpq4z"; depends=[]; }; + geodata = derive2 { name="geodata"; version="0.2-3"; sha256="150scg0arvv8k36jm4g3qwyl6dgy17igqsfxnajkiap5wg8radsm"; depends=[terra]; }; geodetector = derive2 { name="geodetector"; version="1.0-4"; sha256="00zyx68jjl4mldah8mxfvwvv5yfkd4f1s2rlx6fsw6h8y2cwzj3l"; depends=[maptools rgdal rgeos sp]; }; geodimension = derive2 { name="geodimension"; version="1.0.0"; sha256="0mh16cdac7vi8zv98g3s06109fpadan441zd80x9yfsypx75sdz0"; depends=[dplyr generics magrittr pander readr rlang sf tibble tidyr tidyselect]; }; geodist = derive2 { name="geodist"; version="0.0.7"; sha256="07mzxf4ngh34m4830sqnndhbdcvhgarpp46c6hmxsxwky6x5kp5k"; depends=[]; }; - geodiv = derive2 { name="geodiv"; version="1.0.1"; sha256="0lndh825db5jvnb7vhsj4nczc6q8j49ajhpq86rif5zm5d6bz5hd"; depends=[dplyr e1071 landscapemetrics phonTools pracma raster Rcpp RcppArmadillo rgdal rgeos sf sp spatial tibble zoo]; }; + geodiv = derive2 { name="geodiv"; version="1.0.4"; sha256="06jn33j03bnk20489y7r0r7nvk46dprl5zsrm3pgg1py7jk1rv54"; depends=[dplyr e1071 landscapemetrics phonTools pracma raster Rcpp RcppArmadillo rgdal rgeos sf snow sp spatial tibble zoo]; }; geodrawr = derive2 { name="geodrawr"; version="2.0.0"; sha256="05irfyfpk5lgsh0wax8dqdyfw4prynxz1bhs9k1nrz8yn2dd0imn"; depends=[leaflet sf shiny shinydashboard]; }; geoelectrics = derive2 { name="geoelectrics"; version="0.2.0"; sha256="1dmpaf16750ni4yr36cglfz9pv9jax8jxb3kwn47kxgnx3l8qq98"; depends=[fields lattice rgl]; }; geofabrik = derive2 { name="geofabrik"; version="0.1.0"; sha256="0k92gmivccw3kbgkb9bjw7pxc4zc3zdj35x0cbzmjq0k3qxq8ad0"; depends=[]; }; geofacet = derive2 { name="geofacet"; version="0.2.0"; sha256="1aylx2hwqk75y73az1zf0s5mjww77d7i9kafbkzw383f0i5qx42w"; depends=[geogrid ggplot2 ggrepel gridExtra gtable imguR rnaturalearth sf sp]; }; geofd = derive2 { name="geofd"; version="2.0"; sha256="1rsgy4nxfp1gi4vwh8zfzksr6sr2ga31kmd56q5m56gw530570ra"; depends=[fda]; }; - geofi = derive2 { name="geofi"; version="1.0.1"; sha256="147qxrlp9zj49778lxdlkg02zwwyrp7h3psfmp925i6ihh8dfx0i"; depends=[curl dplyr httpcache httr purrr rlang sf xml2 yaml]; }; - geogenr = derive2 { name="geogenr"; version="1.0.0"; sha256="1qik37ns50pq4dvlj6irmls0pwgsw1dl54azdwfkqybkx95g0n7m"; depends=[data_table dplyr generics geomultistar httr magrittr pander purrr readr rlang sf snakecase starschemar stringr tibble tidyr tidyselect tm]; }; + geofi = derive2 { name="geofi"; version="1.0.4"; sha256="1j1b1j1ld1zjj88k9xwa412v7xjjp0jv76g2yljlq7pq3970n6i9"; depends=[curl dplyr httpcache httr purrr rlang sf xml2 yaml]; }; geogrid = derive2 { name="geogrid"; version="0.1.1"; sha256="0b8afwgj9x56z6zh525y7qkiwbv77mjcw3v19kfba0426jn4vi87"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; geohashTools = derive2 { name="geohashTools"; version="0.3.1"; sha256="0ks6ga1vsp5z7sy0xcq9nacffmfsx6yqdlnhqflsb8zb9qbygazf"; depends=[]; }; geojson = derive2 { name="geojson"; version="0.3.4"; sha256="0fvlw06hjb7z0mfsf8vhv1dchdjlvklyzjqlaydjzbwb1kvbhpq7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; @@ -9272,23 +9652,23 @@ in with self; { geojsonlint = derive2 { name="geojsonlint"; version="0.4.0"; sha256="0l6xlf6l9shyvdd2ghkhcgbkxpmycapfpxakzbvd92j1x8dmr9az"; depends=[crul jsonlite jsonvalidate V8]; }; geojsonsf = derive2 { name="geojsonsf"; version="2.0.1"; sha256="1gxzi0wqmrif6bkw7z21aa2j8i0bd7a5nyyrkjiybv7v7d1l1ps2"; depends=[geometries jsonify rapidjsonr Rcpp sfheaders]; }; geoknife = derive2 { name="geoknife"; version="1.6.5"; sha256="1w1mznwpvx4z3qi3g4b83qkrblb2sab7zz5a4r0l8japlwhff9nn"; depends=[curl httr progress sp whisker xml2]; }; + geomander = derive2 { name="geomander"; version="1.0.8"; sha256="1zkiglf7xmasd4f225xx10jlqsq6lx4skrsh47pd5r4hayvwvlby"; depends=[dplyr ggplot2 magrittr nngeo Rcpp readr sf spdep stringr tibble tidycensus tidyr tigris]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="2.0.1"; sha256="1l35c9x1mhqd7z5ragd7w3ay8v2fdnbmbfx9grwi622j8yz1fbmq"; depends=[ape httr jsonlite]; }; geomerge = derive2 { name="geomerge"; version="0.3.2"; sha256="1i6n88k8icwihr9w7ipjb50f68zad602dipb3hd887y4kyf14wni"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; - geometa = derive2 { name="geometa"; version="0.6-3"; sha256="0bj1yg1wfcvq24w85cim6hx8qpi2hj7frdz1fwzhlnxnwkwyk8ip"; depends=[httr jsonlite R6 XML]; }; - geometr = derive2 { name="geometr"; version="0.2.8"; sha256="0ylsz3i435q6pfbkpjxh2bwsjphn8i7iynjarxw77qyhy4f7ac44"; depends=[checkmate crayon deldir dplyr raster Rcpp readr rgdal rlang sf sp spatstat tibble]; }; + geometa = derive2 { name="geometa"; version="0.6-4"; sha256="00jlp5jkb88n1rvbw6hwvjzmlfzg66hsnqnkfyflxjncbpz4fg1x"; depends=[httr jsonlite R6 XML]; }; + geometr = derive2 { name="geometr"; version="0.2.10"; sha256="00yhw6k9wj3q0mmhwrjvhybsz5fcx86ms5n1q2l492jljplp46cr"; depends=[checkmate crayon deldir dplyr purrr raster Rcpp rgdal rlang sf sp tibble]; }; geometries = derive2 { name="geometries"; version="0.2.0"; sha256="05036q4dccmmd955g4n2s5ncc9zxd9v9qyamszszwn147i7hkxcc"; depends=[Rcpp]; }; geometry = derive2 { name="geometry"; version="0.4.5"; sha256="1n10l8ax3783v3lgaacb15qsn8b3f0wpmhg3k39j31s6ciyd3vcg"; depends=[linprog lpSolve magic Rcpp RcppProgress]; }; - geomnet = derive2 { name="geomnet"; version="0.3.1"; sha256="0m5qkbxbrx39v9pwh74c01g8abqwbmphk38h3yxgslyqsrpnpn4l"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; geomorph = derive2 { name="geomorph"; version="4.0.0"; sha256="0y6mz5ssgpj88gzwrlkyhclk5fcq0hi5ghr098s8x76mvj06hmb6"; depends=[ape ggplot2 jpeg Matrix rgl RRPP]; }; - geomultistar = derive2 { name="geomultistar"; version="1.1.0"; sha256="1cgka5gx5hkj0y6mdkl2hn13x508nn8xkw2jn5d41nr6xii3axp0"; depends=[dplyr magrittr pander rgdal rlang RSQLite sf snakecase starschemar stringr tibble tidyr tidyselect]; }; geonames = derive2 { name="geonames"; version="0.999"; sha256="0yz1b7y3vwa4izrhpry4n3iwzb7y67s5p3kgnd7d29cl5pcbpmqx"; depends=[rjson]; }; geonapi = derive2 { name="geonapi"; version="0.4"; sha256="045lrj5qmd3m2ja8i9446d7vz8lmdz8wvm4f3a72cm18xaan1m2p"; depends=[geometa httr keyring openssl R6 XML]; }; - geonetwork = derive2 { name="geonetwork"; version="0.3"; sha256="0qjnv91rcxzw44fmbgm4qpcrbj5qgz1lgmyw53imyhxgyv55awxv"; depends=[geosphere igraph rgdal sf sp]; }; + geonet = derive2 { name="geonet"; version="0.6.0"; sha256="0zav0r4q8i8mxwnr3a7j2ldprfb979pmcx76ssks4p6cfqp0syj4"; depends=[dplyr ggplot2 igraph Matrix mgcv spatstat_core spatstat_geom spatstat_linnet]; }; + geonetwork = derive2 { name="geonetwork"; version="0.4.1"; sha256="04vf39hxl1a2kbgqc054xg9w6hbd3fwag6sy0j8a9agrd5wgks7h"; depends=[geosphere igraph rgdal sf sp]; }; geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; - georob = derive2 { name="georob"; version="0.3-13"; sha256="1ddynk8ss5jslxrwz7rg650d05qa5sh5qc3rzkrq8s4hpvw1zqgw"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; - geos = derive2 { name="geos"; version="0.1.0"; sha256="1pxq6x7xws5ka1fclfrbxigiqmhq5raadb6mr4rj898d2w2wqcsm"; depends=[libgeos wk]; }; - geosapi = derive2 { name="geosapi"; version="0.5"; sha256="0pkyblhxhx87mcql2v07df0hxaksk126ywik6dxyk44h3krz5y4g"; depends=[httr keyring openssl R6 XML]; }; + georob = derive2 { name="georob"; version="0.3-14"; sha256="1an5mxq49kv038dplm9h6ngvsz71lkvjm34i7jjsdpaz3cyflp7v"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + geos = derive2 { name="geos"; version="0.1.1"; sha256="18b52rmf8sgx2hxj50918v0ql8wlrnw6kyx3vrykb144cm98w6d5"; depends=[libgeos wk]; }; + geosapi = derive2 { name="geosapi"; version="0.5-1"; sha256="0ny1nzhfwj9l3gyzls3ksikmjzx06a3420nb3l6b2711v9zymv45"; depends=[httr keyring openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geosed = derive2 { name="geosed"; version="0.1.1"; sha256="07j4q6sgrf83h2gi2j5qap5rifz8gimdacd3b7ld1p3b6ai6kv3r"; depends=[]; }; geospark = derive2 { name="geospark"; version="0.3.1"; sha256="004axa0k9xg1hra8jihwgnc379k8pib1h0zkr82j0m9sii4wrk6r"; depends=[dbplyr dplyr sparklyr]; }; @@ -9301,80 +9681,85 @@ in with self; { geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; geotoolsR = derive2 { name="geotoolsR"; version="1.1"; sha256="162s37j7wh14h91b6acn453bvgpk3cakfi7mgrdvr5bjdqqn7j7v"; depends=[dplyr geoR ggplot2 tidyr]; }; geotopbricks = derive2 { name="geotopbricks"; version="1.5.4"; sha256="1mn15mchxkv9qqjrcsyx0pf56sdz0ba7i5jd1ci1ilr6rig81ckz"; depends=[raster rgdal stringr zoo]; }; - geouy = derive2 { name="geouy"; version="0.2.3"; sha256="11jxy73f53wlwnnzhm3d3yfvf3kbh6lnpl5c94amfqvf79k9m9vi"; depends=[assertthat dplyr fs ggplot2 ggspatial ggthemes glue magrittr RCurl rlang sf stringr testthat viridis]; }; + geouy = derive2 { name="geouy"; version="0.2.5"; sha256="1l9gnb1rk21sr5vrc8bk2kw28b01ykzh0qagx6yxp2aqr9f2xk3x"; depends=[assertthat curl dplyr fs ggplot2 ggspatial ggthemes glue magrittr raster RCurl rgdal rlang sf sp stringr viridis]; }; geoviz = derive2 { name="geoviz"; version="0.2.2"; sha256="1wx1p72532xpg6y3rlrvaiwx57xad3d9fvy9mbadvj418xwxnmim"; depends=[abind chron curl dplyr ggplot2 glue magrittr png progress purrr raster readr rgdal rgeos rgl rlang sf slippymath sp stringr tibble tidyr]; }; + geovol = derive2 { name="geovol"; version="1.0"; sha256="13ll9jyh1fadm2rpfvja0fnqnpr6haivz1vmmpi6yc95rpl4234b"; depends=[zoo]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; gepaf = derive2 { name="gepaf"; version="0.1.1"; sha256="0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm"; depends=[bitops]; }; gerbil = derive2 { name="gerbil"; version="0.1.5"; sha256="1rvf7z7zj04p2faj41fxxjs20bd3ghr6fbzkkapcx48fr4j9skj2"; depends=[DescTools lattice MASS mvtnorm openxlsx pbapply truncnorm]; }; germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.5"; sha256="1gazx0k4nhb9xsyqi0zxdzg9a0kfvf7g1gka7lgaj2f3bpyk0gd3"; depends=[broom data_table ggplot2 ggrepel mathjaxr minpack_lm plyr Rdpack]; }; - gert = derive2 { name="gert"; version="1.3.0"; sha256="1fh72p92wj83yv1ch77jms6k1gjqfji8cmgw23vpxd0p8l9jj4h7"; depends=[askpass credentials openssl rstudioapi sys zip]; }; + gert = derive2 { name="gert"; version="1.4.1"; sha256="1y3318whcifdng87wyngfjq18601zrlj4d8sx40v2c2m5kqmhfv2"; depends=[askpass credentials openssl rstudioapi sys zip]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gesisdata = derive2 { name="gesisdata"; version="0.1.0"; sha256="02xjpw41gm3778lj01kcwjx0lr1i95a0wlrfvs0r5xlajq13jr67"; depends=[dplyr magrittr rio RSelenium stringr]; }; + gesso = derive2 { name="gesso"; version="1.0.1"; sha256="0s9vlh47v4dz8dwq5v6j7vbcs01g701ci1qkb0b26m7zksb4ra58"; depends=[BH bigmemory dplyr Matrix Rcpp RcppEigen RcppThread]; }; gestalt = derive2 { name="gestalt"; version="0.1.8"; sha256="1cb04rd3yvkd47byynrn0pq6brlsi2z2iavh4gfrwmqyvks34k51"; depends=[rlang]; }; gestate = derive2 { name="gestate"; version="1.4.0"; sha256="1ybwi1733w8z97sdj38l66mb8ynhqhl68ijns6rvwqxphac6v5x8"; depends=[doParallel foreach shiny shinythemes survival]; }; - gesttools = derive2 { name="gesttools"; version="1.0.1"; sha256="1kyhmzdzviyx2d52342xnblikvpv04q71fjix9mx2ysb1xbb4yxa"; depends=[DataCombine geeM magrittr nnet rsample tibble tidyr tidyselect]; }; - getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.3.2"; sha256="1z7j4zypxlj17q0qjpzhmrcg6qv848nbbfz1m0rhv1b1bd3qwgsq"; depends=[curl data_table hoardr raster tibble]; }; - getDTeval = derive2 { name="getDTeval"; version="0.0.1"; sha256="0viifs5n6hrns313ihgdbxcmsnl666bqbd0x30i4y6qmc2wqn2fs"; depends=[data_table microbenchmark]; }; + gesttools = derive2 { name="gesttools"; version="1.2.0"; sha256="0w7kl3jm1n5pqbr10r81zzjk2lw5zvs22igsx807f6ldmq8knn7d"; depends=[DataCombine geeM magrittr nnet rsample tibble tidyr tidyselect]; }; + getDTeval = derive2 { name="getDTeval"; version="0.0.2"; sha256="16y24jhy9k1adlmf6yqzc8kla2vw7r0c6zd52jpfkiljxwkm4634"; depends=[data_table formulaic microbenchmark]; }; + getLattes = derive2 { name="getLattes"; version="0.2.0"; sha256="1rrd9x9jmnsy0770c86lqws4a6b2zxf3384h1dcvzrmlk20hhqxw"; depends=[dplyr janitor pipeR purrr rlang tibble xml2]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; }; getProxy = derive2 { name="getProxy"; version="1.12"; sha256="0qcxihgwy3h2b98z2hwjszwqbz117d89xjys7fy0f8m9hv7rf6ph"; depends=[bitops data_table dplyr httr jsonlite RCurl]; }; getable = derive2 { name="getable"; version="1.0.3"; sha256="0v45nqpx55vbj68gj4wxr0bdlrl897ayac78rxjd2lkkjx49hlyh"; depends=[knitr]; }; gethr = derive2 { name="gethr"; version="0.1.0"; sha256="0kpi9b9yg2nh332zkml24pmj6vgjfh8mrfjjg5a636s2rg98g5g7"; depends=[httr jsonlite]; }; getlandsat = derive2 { name="getlandsat"; version="0.2.0"; sha256="15450v93lc4i2qda0zlb5vplwbarkmf3f6sb4rlrdpv9vlj85hff"; depends=[crul data_table rappdirs readr tibble xml2]; }; - getmstatistic = derive2 { name="getmstatistic"; version="0.2.1"; sha256="0jbg668kwkvnzgk6678w000mijch28ni9rr5b9c1l9icwcsphmlc"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; + getmstatistic = derive2 { name="getmstatistic"; version="0.2.2"; sha256="100m5cbwx9anlh1hzjv7d1h1viqsxb0bx0ksc1dsjx3gqrf77q1n"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; getopt = derive2 { name="getopt"; version="1.20.3"; sha256="0zzmzgwl9a4y3s34600vmih22d6y32294f9bvxrnmffnvkgmy7sk"; depends=[]; }; - gets = derive2 { name="gets"; version="0.27"; sha256="07y2x9xz1pvsxq1nsz1yyi5mxwrj64c8ivxl5d29arn8xa38ac16"; depends=[zoo]; }; - getspres = derive2 { name="getspres"; version="0.1.1"; sha256="1k69b7by1398pc9knp97r3k6pv8hixzianqal71ggdrwsb3n1gis"; depends=[colorRamps colorspace dplyr metafor plotrix RColorBrewer]; }; + gets = derive2 { name="gets"; version="0.29"; sha256="09y2r1hhq8ih04i0w23dzabxl85d9rc8l4k37lrzzcd22n61gz6s"; depends=[zoo]; }; + getspres = derive2 { name="getspres"; version="0.2.0"; sha256="190y4qrm1wawp0787zhw3g8h9s2smacvvxbs70pxbhysq4bkzcdd"; depends=[colorRamps colorspace dplyr metafor plotrix RColorBrewer]; }; gettz = derive2 { name="gettz"; version="0.0.4"; sha256="1j83pdny3phfflkdjwiflyfvighn73pysw5bac4hx079dda8k25g"; depends=[]; }; gexp = derive2 { name="gexp"; version="1.0-1"; sha256="1i3sarsawax1landjbm8gxrcrimwzdgrbybzipqwxdrmlgvxslqk"; depends=[jpeg mvtnorm png]; }; + geysertimes = derive2 { name="geysertimes"; version="0.1.9"; sha256="08d04znd1h4s5vdp5981bzz4rb48lnx2nwwnvcqk84rl6zmc0l97"; depends=[jsonlite lubridate readr]; }; gfboost = derive2 { name="gfboost"; version="0.1.0"; sha256="07rdgf2i908ihqzq0gjp414gwvikbxfyj6j4nvz8l4krs32avl87"; depends=[mboost mvtnorm pcaPP]; }; gfcanalysis = derive2 { name="gfcanalysis"; version="1.6.0"; sha256="0w0r4w570dp7n5ixm7qv3x1pw478dghqbyfvfxfi99f5453jdma1"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; - gfer = derive2 { name="gfer"; version="0.1.10"; sha256="1y0ra8k7zka43ibiii16vbwnc3m1i77yc9zj8rhzhmvhajjwad3l"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; + gfer = derive2 { name="gfer"; version="0.1.11"; sha256="08lchdynxv5pxbvk9jqblc515c9fx64mmprvpwwgznczyvhm89j8"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; gfiExtremes = derive2 { name="gfiExtremes"; version="1.0.0"; sha256="1ys7vrd5kpyqj42m384r2b91w53rlx6hcznpb0a0mnniqj4wc61r"; depends=[BH coda doParallel foreach Rcpp RcppArmadillo]; }; gfiUltra = derive2 { name="gfiUltra"; version="1.0.0"; sha256="1n6sp7h0ys92mqixznrs2j8kmban3mx8swrwdpxgxc6vxycky8d8"; depends=[lazyeval mvtnorm SIS]; }; - gfilinreg = derive2 { name="gfilinreg"; version="2.0.1"; sha256="0x2mb3x1d0z3vylfasqyjypxn0gv3qk4nigkv6p5z5fb8wrvafx3"; depends=[BH data_table EigenR lazyeval memuse Rcpp RcppEigen spatstat spatstat_geom]; }; - gfilmm = derive2 { name="gfilmm"; version="2.0.3"; sha256="1sinhdlfyhz8wdv4pwi1j6dfa02bmp15x5asn5qhazp979nbbxrz"; depends=[forcats lazyeval Matrix Rcpp RcppEigen rgr spatstat spatstat_geom]; }; + gfilmm = derive2 { name="gfilmm"; version="2.0.4"; sha256="16lcjknamq4zm9aqj36ag1ykg635syl54amfxp04xhanqas505bf"; depends=[forcats lazyeval Matrix Rcpp RcppEigen rgr spatstat spatstat_geom]; }; gfilogisreg = derive2 { name="gfilogisreg"; version="1.0.1"; sha256="1484scn3ckh5cbazwpdspllip9pvjzp75qjg68ip1zbckz9ll6ji"; depends=[BH EigenR lazyeval rcdd Rcpp RcppArmadillo roptim spatstat spatstat_geom]; }; gfmR = derive2 { name="gfmR"; version="1.1-0"; sha256="0qzzbcra1fnbp0h31b1as20yhmqmi7p62xrhikj64an9avg9b277"; depends=[faraway nnet]; }; - gfoRmula = derive2 { name="gfoRmula"; version="0.3.1"; sha256="1y1k5zwv06kc6qk7ki7x7c1618irvwd6iw26gs5n8lv8z3cifqmy"; depends=[data_table ggplot2 ggpubr nnet progress stringr survival truncnorm truncreg]; }; - gfonts = derive2 { name="gfonts"; version="0.1.2"; sha256="06v73vmw8narl2ym36calb1xpv7xxw38gi2m08ha3c0jkl71jmw8"; depends=[crul glue htmltools jsonlite shiny usethis]; }; + gfoRmula = derive2 { name="gfoRmula"; version="0.3.2"; sha256="1pk1pzwc7zkvz9fjpd6lqymjashd9h5kvxx68v8lqi8ns3c0s477"; depends=[data_table ggplot2 ggpubr nnet progress stringr survival truncnorm truncreg]; }; + gfonts = derive2 { name="gfonts"; version="0.1.3"; sha256="0dbpw93pa3asjddl2f2ih7149mkjfz3kywmz2623mfl0sm1x5g71"; depends=[crayon crul glue htmltools jsonlite shiny]; }; gfpop = derive2 { name="gfpop"; version="1.0.3"; sha256="16h0v2jcydn95yb4pkba808hn20darq532yp7djqx1issr1fwqjr"; depends=[Rcpp]; }; gg_gap = derive2 { name="gg.gap"; version="1.3"; sha256="0m66050ryn31xmsmmikjsssllasvjdmp9yjbwfdwfpwdv106zn9h"; depends=[cowplot ggplot2]; }; ggBubbles = derive2 { name="ggBubbles"; version="0.1.4"; sha256="116rl8j0s9xwhh9jl5yj9fspkhv2zrirbx9247hhns9ngrdn4i3x"; depends=[dplyr ggplot2]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; ggDCA = derive2 { name="ggDCA"; version="1.1"; sha256="0jpg7n6nk2jgq668ff0l9zk26zk39abc74f6w5x8gf4zsb8y0zp9"; depends=[base_rms do ggplot2 rms set survival]; }; ggExtra = derive2 { name="ggExtra"; version="0.9"; sha256="18mbi6gblqmrsciad1d2c9ngllk6mayaqj43k40hjq9ydqnvjbgj"; depends=[colourpicker ggplot2 gtable miniUI R6 scales shiny shinyjs]; }; - ggOceanMaps = derive2 { name="ggOceanMaps"; version="1.0.9"; sha256="15qrzl448sdf4ghr6m9ida6qjjnwa7p853axrg35k6p36mg9bgd8"; depends=[dplyr ggplot2 ggspatial raster rgdal rgeos sf smoothr sp stars units]; }; - ggPMX = derive2 { name="ggPMX"; version="1.1.2"; sha256="1lcfjj6k4y69zs0zr3xf3l2hz8mdjw0wqbw5p8mqjm24qkynqb9a"; depends=[assertthat data_table GGally ggplot2 gtable knitr magrittr R6 rmarkdown stringr yaml zoo]; }; + ggHoriPlot = derive2 { name="ggHoriPlot"; version="1.0.0"; sha256="198l1jzs2wybg8ixq8aacrs3b7g2hpxbi7gajr2z5hyiv7317lrq"; depends=[dplyr ggplot2 glue magrittr stringr tidyr]; }; + ggPMX = derive2 { name="ggPMX"; version="1.2.4"; sha256="1jf1yn4l3mp79njqsjx2axzc26nxbi07m9pk1zwnyf0im3j65k0h"; depends=[assertthat checkmate data_table dplyr GGally ggplot2 gtable knitr magrittr purrr R6 readr rlang rmarkdown scales stringr tibble tidyr yaml zoo]; }; ggQC = derive2 { name="ggQC"; version="0.0.31"; sha256="1j9cs97hcj5zmqvn5rjr3gl0b9748s3pv2nb7v66dsyjdwvj7wyy"; depends=[dplyr ggplot2 tidyr]; }; ggQQunif = derive2 { name="ggQQunif"; version="0.1.5"; sha256="0vrxmqxy946mwdq0mb2m1ch41r0chrw7hcn18dr3mp10bv7pl7wj"; depends=[dplyr ggplot2 scales]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; ggResidpanel = derive2 { name="ggResidpanel"; version="0.3.0"; sha256="1vsjw229pd36100ix1sgfmk5lb9b0fx3l6pxg1irsfhm2ypbg1ig"; depends=[cowplot ggplot2 MASS plotly qqplotr stringr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; - ggVennDiagram = derive2 { name="ggVennDiagram"; version="1.0.7"; sha256="0qpzqf0x7is5xphlq0yqv1zpi073yq8zd2i078d5kbx1ch5c93p0"; depends=[dplyr ggplot2 magrittr plotly purrr RVenn sf stringr tibble tidyr]; }; + ggVennDiagram = derive2 { name="ggVennDiagram"; version="1.1.4"; sha256="0657qql1spnj6giyj7f1gi28fw06nl23qxrir88d49ddbv1rn8ab"; depends=[dplyr ggplot2 magrittr plotly purrr RVenn sf stringr tibble]; }; ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; }; ggalluvial = derive2 { name="ggalluvial"; version="0.12.3"; sha256="0mkan9gxg3yxjism22yxbhvlh2lh7wpbrqpb355za790prcmjbh3"; depends=[dplyr ggplot2 lazyeval rlang tidyr tidyselect]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; ggamma = derive2 { name="ggamma"; version="1.0.1"; sha256="1zc4p2bz4pxqycrzgb9wwl53lxqcikxsihna6ff8pmw1n623j85z"; depends=[]; }; gganimate = derive2 { name="gganimate"; version="1.0.7"; sha256="046v6j92xxgaghsnh88dy5h8x040qsfa8csvhp4dmsfmrrf0dz0f"; depends=[ggplot2 glue plyr progress rlang scales stringi tweenr]; }; - ggasym = derive2 { name="ggasym"; version="0.1.5"; sha256="1fc0vrkg57h9qqyrfwwippq7yy172g1w79cdb672myjxfjpnxwp4"; depends=[dplyr ggplot2 magrittr purrr rlang scales stringr tibble tidyr]; }; + ggasym = derive2 { name="ggasym"; version="0.1.6"; sha256="1vgsqq2m4w5clmf27mmj6jqn2s8m1izz3gj2bxqpmdcvzf5vxkgr"; depends=[dplyr ggplot2 magrittr purrr rlang scales stringr tibble tidyr]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; + ggborderline = derive2 { name="ggborderline"; version="0.1.0"; sha256="02m7g0fmayp0zscj3x167n96cj6kn62a8nw67d42k6p74bard2sy"; depends=[ggplot2 scales]; }; + ggbreak = derive2 { name="ggbreak"; version="0.0.5"; sha256="0kicdac4pb586xvik3w0pb86nga2p68dgjqlwnccys7ss75q93ff"; depends=[aplot ggplot2 ggplotify rlang]; }; ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; ggbump = derive2 { name="ggbump"; version="0.1.0"; sha256="15cnzv2q3gylkmd1zj044cp14ldnkc4fzwmxaqpc8cagwf9i10zk"; depends=[dplyr ggplot2 purrr tidyr]; }; ggcharts = derive2 { name="ggcharts"; version="0.2.1"; sha256="1c0gdn8skkm82f3qxv9551l36zwqcga9b9sbc48q8hp71ay4ac6b"; depends=[colorspace dplyr ggplot2 lifecycle magrittr patchwork rlang]; }; + ggcleveland = derive2 { name="ggcleveland"; version="0.1.0"; sha256="1pl9qhj7p5kflx0ni59hq1k9afqchghg5wig9v1ml5pqrjz70pxa"; depends=[dplyr egg ggplot2 lattice magrittr readr rlang stringr tibble tidyr vctrs]; }; ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.3"; sha256="0hi9lz121ya1l2lbm7rqlxg6fs6bvxck396dngnidrhl5fvqb41b"; depends=[ggplot2 reshape2]; }; ggdag = derive2 { name="ggdag"; version="0.2.3"; sha256="12w02bflcn0b96ybjy3afnls8vfwwpxd0w9yn19hva2my654cl64"; depends=[dagitty dplyr forcats ggplot2 ggraph ggrepel igraph magrittr pillar purrr stringr tibble tidygraph]; }; ggdark = derive2 { name="ggdark"; version="0.2.1"; sha256="1w93g2j4g45x9s841v9zi18lxzda81ipa13fajqc6p9xk8frvgrf"; depends=[ggplot2]; }; ggdemetra = derive2 { name="ggdemetra"; version="0.2.2"; sha256="1j0nwmv2acyrkpn230jj6yf5nnl40kpqdqaglrnrfqw5rp357krp"; depends=[ggplot2 ggrepel gridExtra RJDemetra]; }; ggdendro = derive2 { name="ggdendro"; version="0.1.22"; sha256="0skbj487b6f6pj2iz4yq2b9gbgb39cv5dyzhdl3w7ay1k0s5z9ph"; depends=[ggplot2 MASS]; }; - ggdist = derive2 { name="ggdist"; version="2.4.0"; sha256="0m8w4zjm1qhh3np11dpxvqqs4cxv13hg9rq5jlf4sy4dg2akxl2n"; depends=[distributional dplyr fda forcats ggplot2 HDInterval purrr rlang scales tibble tidyr tidyselect vctrs]; }; + ggdist = derive2 { name="ggdist"; version="3.0.0"; sha256="08rkqagwx1673fyckv37fy7wf0yklsddpxbmx8k15v2rbfbac8d9"; depends=[distributional dplyr ggplot2 HDInterval rlang scales tibble tidyselect vctrs withr]; }; ggdmc = derive2 { name="ggdmc"; version="0.2.6.0"; sha256="1gncv7npl548k3zd41x2gwg5qywn5rp6zb4i7ga78sy77mvi3x92"; depends=[coda data_table ggplot2 matrixStats Rcpp RcppArmadillo]; }; gge = derive2 { name="gge"; version="1.6"; sha256="0l5xhbn3wdvsmr8gavj8r3yn8mcfw21pmzdfy4wygqa6jamcsr59"; depends=[nipals reshape2]; }; ggeasy = derive2 { name="ggeasy"; version="0.1.3"; sha256="0zp9jhm8vc1gpja5s6g92snd1jnskadafc226l51y8cps7lj8f6q"; depends=[ggplot2 rlang]; }; ggedit = derive2 { name="ggedit"; version="0.3.1"; sha256="10fbjqq6l7wfibi65mq423w7v8gymr541if749qhsnd9b2jyhaj5"; depends=[colourpicker dplyr ggplot2 magrittr miniUI plyr purrr rlang rstudioapi scales shiny shinyAce shinyBS tidyr]; }; - ggeffects = derive2 { name="ggeffects"; version="1.1.0"; sha256="1qb9d7nfs1hkgxhr6pkdrxxx7f8ar8g3si95bsm7wgl94xf2d8di"; depends=[insight MASS sjlabelled]; }; + ggeffects = derive2 { name="ggeffects"; version="1.1.1"; sha256="0xrb105kblkj3l9zlj9yy52rjlmx5x2aai1wwb5zvjr1f6nlc84l"; depends=[insight MASS sjlabelled]; }; ggenealogy = derive2 { name="ggenealogy"; version="1.0.1"; sha256="19six9ln1yaqv268abm9qvb61nl8zdz3gghwr8hmwsa94xwhzhkq"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggetho = derive2 { name="ggetho"; version="0.3.6"; sha256="1iv0vad8y85bvz8rx0flqyrb38d79j9fhmd6ay5siyccigi88clj"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.3"; sha256="1p3hbznpsaznlk0lnjyazc130www0p5919qplg3kspng7qh8p22w"; depends=[colorspace dplyr ggplot2 rstan]; }; @@ -9382,24 +9767,26 @@ in with self; { ggfocus = derive2 { name="ggfocus"; version="1.0.0"; sha256="03q0rz7flm8sc8hrlkcm5fz66qiyxb8z8q4bh9dglhw0jc8q1fvb"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; ggforce = derive2 { name="ggforce"; version="0.3.3"; sha256="0bwzjbjl678xvc2ihm80dwn9pidwafqjdab3k299csys16s3na1a"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; ggformula = derive2 { name="ggformula"; version="0.10.1"; sha256="1ph5jd8svk8hmshi894vmmpq3zwgdmf4yn3gmdlkad68z8jynhsp"; depends=[ggforce ggplot2 ggridges ggstance labelled magrittr mosaicCore rlang scales stringr tibble]; }; - ggfortify = derive2 { name="ggfortify"; version="0.4.11"; sha256="1wfm7l9bz6msh7rflgfv9dgbxh1ikz2ay0v7sgk9nkc24y6lhbpk"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.12"; sha256="13f3ggn94czw7xw5qxwrdncr2h7z7bvwgw8zxni8wkc8x3kbz5rd"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggfun = derive2 { name="ggfun"; version="0.0.4"; sha256="07njcjcj212zxanq8x3nkh7mgvqmym08rx5s41rz9flhk9gkc9jr"; depends=[ggplot2 rlang]; }; ggfx = derive2 { name="ggfx"; version="1.0.0"; sha256="1q9ppp88yj6lplj7wxnf18aa7a8f5iz35765bdfhsrkdxlrkny7h"; depends=[ggplot2 gtable magick ragg rlang]; }; gggap = derive2 { name="gggap"; version="1.0.1"; sha256="1iidxm7qcrg0isw2q27cmjbfb3pkfj5jcg1nj8lgy6xmydw3vrw3"; depends=[cowplot ggplot2]; }; gggenes = derive2 { name="gggenes"; version="0.4.1"; sha256="1s4knz2g06w46jbi037l9ii0kkxvl7gnljp54s4z36hnswsrv8jk"; depends=[ggfittext ggplot2 rlang]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; gggibbous = derive2 { name="gggibbous"; version="0.1.1"; sha256="1sy9d9hl04b13yz4563bzsdznjdh3xmikdrsqg8kdv8wn481lqbd"; depends=[ggplot2 scales]; }; ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; - ggh4x = derive2 { name="ggh4x"; version="0.1.2.1"; sha256="1a3aiyc1shw5hlf3m90dc528dsx4li6mqrh9g5i7s353yck226mj"; depends=[ggplot2 gtable rlang scales vctrs]; }; + ggh4x = derive2 { name="ggh4x"; version="0.2.0"; sha256="0gv9ckkdqbcjknzsv8h3955wnikawdfypr279v74hvwyq86af29r"; depends=[ggplot2 gtable rlang scales vctrs]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghalves = derive2 { name="gghalves"; version="0.1.1"; sha256="1w4j8grir1i8ar7fdsk4f6czkl5j2wwn67y746mis2diwnzhcil3"; depends=[ggplot2 gtable]; }; - gghighlight = derive2 { name="gghighlight"; version="0.3.1"; sha256="1w15g67bh5cz0y12lb115bppmff9ayyrk76alxd6aznz534sbc5i"; depends=[dplyr ggplot2 ggrepel lifecycle purrr rlang tibble]; }; + ggheatmap = derive2 { name="ggheatmap"; version="2.1"; sha256="1dks2fmkaaws5v7mgcw6rbvb5nfr7c9mmg0pqwywwx7rxj3gm05q"; depends=[aplot factoextra ggplot2 ggpubr patchwork tibble tidyr]; }; + gghighlight = derive2 { name="gghighlight"; version="0.3.2"; sha256="0bxgn4srxz1qhawqa8ck57p8hg5ikwfa9ll03zmnn8fb19akwm2v"; depends=[dplyr ggplot2 ggrepel lifecycle purrr rlang tibble]; }; gghilbertstrings = derive2 { name="gghilbertstrings"; version="0.3.3"; sha256="0b3xp1w6fkkmjh7gihhfkp4npx553a75bvsal3w4j57xa34l8rap"; depends=[dplyr ggplot2 lifecycle magrittr Rcpp rlang tibble]; }; - ggimage = derive2 { name="ggimage"; version="0.2.8"; sha256="0p2bbcw1fwzpfnmdq2h9h18xka9jrzfd2v705rbniv8nas0ga14d"; depends=[ggplot2 ggplotify jsonlite magick rvcheck scales tibble]; }; - ggimg = derive2 { name="ggimg"; version="0.1.0"; sha256="0lgak04690xvy0j1g8rgbj9x81ychkx6hp1f8d92piz432wb1z71"; depends=[abind ggplot2 jpeg png]; }; + ggimage = derive2 { name="ggimage"; version="0.2.9"; sha256="0smbwi417xjxgypyy620lidnj6ajfj30ji0bhlr6h22l6kvqplb7"; depends=[ggfun ggplot2 ggplotify jsonlite magick scales tibble]; }; + ggimg = derive2 { name="ggimg"; version="0.1.1"; sha256="0yc3w5vpwga2qz7mfv7i8fxfhgdbrrkd7mjm0axqd3d2qz466b36"; depends=[abind ggplot2 jpeg png]; }; gginference = derive2 { name="gginference"; version="0.1.3"; sha256="1r960cglnkii8xih4r1r7wd857jqn53f08zi9dnj54bpqrs374zx"; depends=[ggplot2 rlang]; }; - gginnards = derive2 { name="gginnards"; version="0.0.4"; sha256="1f6j9ax0lh7bbcjrzqsxqh5csd8pz8hqmkb5p62knzgn2pq7y17z"; depends=[ggplot2 magrittr rlang stringr tibble]; }; + gginnards = derive2 { name="gginnards"; version="0.1.0-1"; sha256="1kgyrssmkyaqkahdqbc7abx955iyfls96kfamryhcarvbclkf2jx"; depends=[ggplot2 magrittr rlang stringr tibble]; }; ggip = derive2 { name="ggip"; version="0.2.0"; sha256="0jfh6sr34nbqwqypx6qdjggl2q6qbmpl17cmy45v6zdr5phrzhrx"; depends=[dplyr ggplot2 glue ipaddress Rcpp rlang tidyr vctrs]; }; - ggiraph = derive2 { name="ggiraph"; version="0.7.8"; sha256="0iz2v73m8sm80k2vb62ajrirsh00g680938gp6haybq4s61imdki"; depends=[gdtools ggplot2 htmltools htmlwidgets purrr Rcpp rlang uuid]; }; + ggiraph = derive2 { name="ggiraph"; version="0.7.10"; sha256="13jbiwjjlyqlx38kb8v7ikva8kxii8mhsbynvshjy1ndil5kk8vb"; depends=[ggplot2 htmltools htmlwidgets purrr Rcpp rlang systemfonts uuid]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.3.0"; sha256="0q8ppixw5i1hpphmswpw6lvq7gx8rx4gfs2b8d31wbn32ziiv2rk"; depends=[dplyr ggiraph ggplot2 magrittr mgcv mycor plyr ppcor purrr RColorBrewer reshape2 scales sjlabelled sjmisc stringr tidyr]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.1"; sha256="012md2m0jqfcccb933j423m3ck31v3p0pd41gjxpyg9082y7ixyj"; depends=[ggplot2 ggridges]; }; gglasso = derive2 { name="gglasso"; version="1.5"; sha256="12l0ac1n54z41yw7c00fm6q2mjmhp9blk4f8vp7q2my2xxwh1fmj"; depends=[]; }; @@ -9412,11 +9799,11 @@ in with self; { ggmcmc = derive2 { name="ggmcmc"; version="1.5.1.1"; sha256="1y6ya2qihm8h6ds84akhmsxn9c8jriw03wakaqzsmi21agz87n21"; depends=[dplyr GGally ggplot2 tidyr]; }; ggmix = derive2 { name="ggmix"; version="0.0.2"; sha256="158pzmr4vmy2qxmp3nrabjgkg11mrdvl1skzxgwida2is900f7gf"; depends=[glmnet MASS Matrix]; }; ggmosaic = derive2 { name="ggmosaic"; version="0.3.3"; sha256="1zm1zfbd0qk6icw65m9hz1hgyqj632ibq3qilidvx5jy7jh8nbpy"; depends=[dplyr ggplot2 ggrepel plotly productplots purrr rlang scales tidyr]; }; + ggmotif = derive2 { name="ggmotif"; version="0.1.1"; sha256="1ny4kladbhidnx3z6sz3vcjlxkhvr9qci1g9b01jrznc8sg1c050"; depends=[ape aplot dplyr ggplot2 ggtree magrittr stringr tidyverse XML]; }; ggmr = derive2 { name="ggmr"; version="0.1.1"; sha256="0941rvh7m5knlhp0m0mhm4j8spmch0pyvwhzs3bycq3vzlvzv1w7"; depends=[MASS]; }; - ggmsa = derive2 { name="ggmsa"; version="0.0.6"; sha256="1iimrps235ax6zdmh1dxy9q4qs39280b5mbir93bynm4irh27r9l"; depends=[aplot Biostrings ggplot2 magrittr RColorBrewer stringr tidyr]; }; ggmuller = derive2 { name="ggmuller"; version="0.5.4"; sha256="0y7bm9fm5i8acpy6fa903ca2r9yasky7kg2hicm4xz5ni09jm20x"; depends=[ape dplyr ggplot2]; }; - ggmulti = derive2 { name="ggmulti"; version="1.0.1"; sha256="0hjrhccl8m7z18fdsda1blfw2gqg27sh4rv81x0ajkks86dgq2mw"; depends=[dplyr ggplot2 tidyr]; }; - ggnetwork = derive2 { name="ggnetwork"; version="0.5.8"; sha256="1gdvywx2n4ph0dr8q1c5gfsmv4jjy0g41cnhjn68kkmg5fdc3ix8"; depends=[ggplot2 ggrepel igraph network sna]; }; + ggmulti = derive2 { name="ggmulti"; version="1.0.4"; sha256="07kqhfpg7alayfq4a86wq18jzdcmxd99607w1amzidizmwgd54d8"; depends=[dplyr ggplot2 tidyr]; }; + ggnetwork = derive2 { name="ggnetwork"; version="0.5.10"; sha256="0gqdgy5yh700dg0f7xb80hczlnqfisn8l55j7amd1n7fp2x5sr8v"; depends=[ggplot2 ggrepel igraph network sna]; }; ggnewscale = derive2 { name="ggnewscale"; version="0.4.5"; sha256="1hjysfagd2lqy8yivqq9q7l6hbvyq8kasw3zqh5fk9xn18ikc702"; depends=[ggplot2]; }; ggnormalviolin = derive2 { name="ggnormalviolin"; version="0.1.2"; sha256="1gbv2b86nznw5bs05c4ns96b8hsxkhikhcf8syl2qbbafzy8vx6y"; depends=[dplyr ggplot2 magrittr scales]; }; ggnuplot = derive2 { name="ggnuplot"; version="0.1.0"; sha256="0i09ybmxdjyr15z1a651k3bkbqskri4ipcyjap93020zbfv05r9c"; depends=[ggplot2]; }; @@ -9427,20 +9814,21 @@ in with self; { ggparty = derive2 { name="ggparty"; version="1.0.0"; sha256="0s6hr5p930kl3pj6ajwgwqz6yikc3l9hhzy1yn0nqc0r8pp2jyqf"; depends=[checkmate ggplot2 gtable partykit rlang survival]; }; ggperiodic = derive2 { name="ggperiodic"; version="1.0.1"; sha256="084n37jwldnhqx61ayq9b55bi4dp2iqyrj2qbp67w0ps1xn5jm6b"; depends=[data_table dplyr ggplot2 sticky tidyselect]; }; ggplot_multistats = derive2 { name="ggplot.multistats"; version="1.0.0"; sha256="1afzfa86vc484bcwpg7m1ky03jpax584rigzgai8w06pifkmz0il"; depends=[ggplot2 hexbin rlang scales]; }; - ggplot2 = derive2 { name="ggplot2"; version="3.3.3"; sha256="1k136k1sr6dq1xvx6gs6gzji6hbnnwnsb5qivsxrblfv90irxhj5"; depends=[digest glue gtable isoband MASS mgcv rlang scales tibble withr]; }; + ggplot2 = derive2 { name="ggplot2"; version="3.3.5"; sha256="1si46bf9p09qzs208hqffwcb40305p361whmwhc1pwrsmx7jjxdh"; depends=[digest glue gtable isoband MASS mgcv rlang scales tibble withr]; }; ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; ggplotAssist = derive2 { name="ggplotAssist"; version="0.1.3"; sha256="1g0s1dkbrxmwqjqppagdbnx24s0nbjn09xwxix3dkfssz6drhala"; depends=[dplyr editData gcookbook ggplot2 ggthemes magrittr miniUI moonBook rstudioapi scales shiny shinyAce shinyWidgets stringr tibble tidyverse]; }; ggplotgui = derive2 { name="ggplotgui"; version="1.0.0"; sha256="1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0"; depends=[ggplot2 haven plotly RColorBrewer readr readxl shiny stringr]; }; - ggplotify = derive2 { name="ggplotify"; version="0.0.6"; sha256="1xs9l05hzlrgcr0p0xah2b05fbm64ma3vfwzn4p8q6nj7xch1dbd"; depends=[ggplot2 gridGraphics rvcheck]; }; + ggplotify = derive2 { name="ggplotify"; version="0.1.0"; sha256="12mk3fa8fdjxj7xxz21jkr7h91w5wdgwjqhszcz1qffwsgb773qp"; depends=[ggplot2 gridGraphics yulab_utils]; }; ggplotlyExtra = derive2 { name="ggplotlyExtra"; version="0.0.1"; sha256="1m2rhylpzj934gb50lxjp47rxz0kwl9i1p3n7w1rz4qi96pr5p1c"; depends=[ggplot2 plotly rlang]; }; - ggpmisc = derive2 { name="ggpmisc"; version="0.3.9"; sha256="0nb0lpwqph9334s9sq77mk3nd22icy9d9hywz4awhf6nvp5rcc2v"; depends=[dplyr generics ggplot2 glue gridExtra lubridate magrittr MASS plyr polynom rlang scales splus2R stringr tibble xts zoo]; }; + ggpmisc = derive2 { name="ggpmisc"; version="0.4.3"; sha256="0ff84ybj4648c1v05ng3l62g9n52igjwvm320qkfbdzdxzncpzik"; depends=[dplyr generics ggplot2 ggpp lmodel2 lubridate MASS plyr polynom quantreg rlang scales splus2R tibble]; }; ggpointdensity = derive2 { name="ggpointdensity"; version="0.1.0"; sha256="0c9a14j3b0hvamqylhzldw2hjdxmfbllwahjkf3gg2rw337ld9iy"; depends=[ggplot2]; }; ggpol = derive2 { name="ggpol"; version="0.0.7"; sha256="11xr26kwmkjjb51wm44ydv0vcinc6k6faqwx4s2faj4iwidlys1m"; depends=[dplyr ggplot2 glue gtable plyr rlang tibble]; }; ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; - ggprism = derive2 { name="ggprism"; version="1.0.2"; sha256="19kb5ra4g7mbhlrbhhlhhyav9bz68kjdvazjyhhvnvpp2il0w85j"; depends=[digest ggplot2 glue gtable rlang scales tibble]; }; + ggpp = derive2 { name="ggpp"; version="0.4.2"; sha256="0m2wq9kqlxqxlzyx9fd0c4iw6qb7kpjrq7fqqa2kvwyj79vx6ahj"; depends=[dplyr ggplot2 glue gridExtra lubridate magrittr MASS polynom rlang scales stringr tibble xts zoo]; }; + ggprism = derive2 { name="ggprism"; version="1.0.3"; sha256="09dh0r8r5s61i5dbk6rswajc2vm7k8wvlqyvzq8wr160676lycjp"; depends=[digest ggplot2 glue gtable rlang scales tibble]; }; ggpubr = derive2 { name="ggpubr"; version="0.4.0"; sha256="0x86lmghr25k8w90yrp360dn42dhp5cjvjpdiv2s2gxfn701xcmb"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr rlang rstatix scales tibble tidyr]; }; ggpval = derive2 { name="ggpval"; version="0.2.4"; sha256="0zi3k79iy8pwnrgi9r9l4r9ghv1db9cxsagif8wsrlak4nr8akza"; depends=[data_table ggplot2]; }; - ggquickeda = derive2 { name="ggquickeda"; version="0.2.0"; sha256="12bpsd54gscs66paz9jwxzmffrda3b91la9q7s77cjrcjcz3115i"; depends=[colourpicker dplyr DT Formula GGally ggbeeswarm ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc markdown plotly quantreg rlang RPostgres scales shiny shinyFiles shinyjqui shinyjs stringr survival survminer table1 tidyr zoo]; }; + ggquickeda = derive2 { name="ggquickeda"; version="0.2.1"; sha256="1yql17wla60lg713cd4kr4906i4ngkvyg0s962zpri76g2z3acvv"; depends=[colourpicker dplyr DT Formula GGally ggbeeswarm ggplot2 ggpmisc ggpubr ggrepel ggstance gridExtra Hmisc markdown plotly quantreg rlang RPostgres scales shiny shinyFiles shinyjqui shinyjs stringr survival survminer table1 tidyr zoo]; }; ggquiver = derive2 { name="ggquiver"; version="0.2.0"; sha256="1hsayqxf4brck1rx97yyprw1axc83lksgf7mn3rh8hqx4h1f5f0f"; depends=[dplyr ggplot2]; }; ggraph = derive2 { name="ggraph"; version="2.0.5"; sha256="0m4n8iw2b9jk8hcy5blg5w59zsqcpsbv27wbw598dvljpafx8sp3"; depends=[digest dplyr ggforce ggplot2 ggrepel graphlayouts gtable igraph MASS Rcpp rlang scales tidygraph viridis withr]; }; ggraptR = derive2 { name="ggraptR"; version="1.3"; sha256="1i6jp0n1sz5b4sv3d4h5624zhlknih2qp6p2m2ri6s3gsh1pl9zz"; depends=[dplyr ggplot2 pacman purrr shiny]; }; @@ -9448,14 +9836,16 @@ in with self; { ggrastr = derive2 { name="ggrastr"; version="0.2.3"; sha256="0cwhgxxp23alsmccppx5bn5ri8wp5n5012d1m51rg7ss6q1194wc"; depends=[Cairo ggbeeswarm ggplot2 png ragg]; }; ggrepel = derive2 { name="ggrepel"; version="0.9.1"; sha256="1z5xyr5f4aryy0v1gzz9m8m4s5fzzwbrf0fxll1nbflr8xnr3yr9"; depends=[ggplot2 Rcpp rlang scales]; }; ggridges = derive2 { name="ggridges"; version="0.5.3"; sha256="0bmlqy1p6rac90af97ffpdi6php7dblx66l2hcm8ljidgyqzmspm"; depends=[ggplot2 plyr scales withr]; }; - ggrisk = derive2 { name="ggrisk"; version="1.2"; sha256="1zcqpddv02hr77s8gw17gr7yww7h9yma0279rxnckxhxlfi88ym5"; depends=[cutoff do egg fastStat ggplot2 nomogramFormula rms set survival]; }; + ggrisk = derive2 { name="ggrisk"; version="1.3"; sha256="02df3gcviax747d33v30m97jsazj7zdpjnhypfy38cg70yxidwg9"; depends=[cutoff do egg ggplot2 nomogramFormula reshape2 rms set survival]; }; ggroups = derive2 { name="ggroups"; version="2.1.0"; sha256="02x62dzpmisk224hs4kgmcc0r6pd87zvjnpdw1sm7rckhi5b56q2"; depends=[]; }; ggsci = derive2 { name="ggsci"; version="2.9"; sha256="0g73x6grbka7ahjh6z23m3wrcifp5rdfdiasbl8lq4sp6rplxwaa"; depends=[ggplot2 scales]; }; ggseas = derive2 { name="ggseas"; version="0.5.4"; sha256="1jpdijwll5l7bg7cmjnklkxffysi9ckzg50rw2a2cd00zwby11q9"; depends=[ggplot2 rlang seasonal zoo]; }; + ggseg = derive2 { name="ggseg"; version="1.6.4"; sha256="0x6vjsdkkrdnxi4a4dzcbadpqmmn0058i980s0a8456hwqlld7s5"; depends=[dplyr ggplot2 sf tidyr vctrs]; }; + ggseg3d = derive2 { name="ggseg3d"; version="1.6.3"; sha256="1rpq2wgyyladz5nkngkvbf3cy4pw212dj1vfh7ksh0bxi7v1k6mh"; depends=[dplyr magrittr plotly scales tidyr]; }; ggseqlogo = derive2 { name="ggseqlogo"; version="0.1"; sha256="13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"; depends=[ggplot2]; }; ggshadow = derive2 { name="ggshadow"; version="0.0.2"; sha256="08bnjl7zsa4kkjl4kadmwss84bngd36xqqly91lvv359qrzr9hzq"; depends=[ggplot2 glue rlang scales]; }; - ggside = derive2 { name="ggside"; version="0.0.1.3"; sha256="0bqcqw6kpfxpncqwkvk03nx1sml0zggm4lz0z3cfqhcryqn4rarl"; depends=[ggplot2 glue gtable rlang scales]; }; - ggsignif = derive2 { name="ggsignif"; version="0.6.1"; sha256="0rjy9wqsq67jjm1jz3j7hm599x0rshrrhw2w01iaqb9kf506hvjh"; depends=[ggplot2]; }; + ggside = derive2 { name="ggside"; version="0.1.2"; sha256="0p25ad26s44y9sdja1a3rgyp0qrhwxxajvszl21kfszl7qlc3pzj"; depends=[ggplot2 glue gtable rlang scales]; }; + ggsignif = derive2 { name="ggsignif"; version="0.6.3"; sha256="1ad774c7s7y4i00xd89lfigr9aybl94q98ch598k3rchanr4b1fa"; depends=[ggplot2]; }; ggsn = derive2 { name="ggsn"; version="0.5.0"; sha256="04vnap83w06hbqqi5kgxmrdb3a13n5mcdk5lllymv6nrzvl84f2x"; depends=[ggmap ggplot2 maptools png sf]; }; ggsoccer = derive2 { name="ggsoccer"; version="0.1.6"; sha256="1b3cx2ym3pknshrxmdgwzyx92c1hl6kyvxm2s8izlaa21z8v6z59"; depends=[ggplot2]; }; ggsolvencyii = derive2 { name="ggsolvencyii"; version="0.1.2"; sha256="0jzj4iglgzwp6pfs5zr7mirdiqrrmbwdvl245b1fwf42rnxbqrq6"; depends=[dplyr ggplot2 magrittr tidyr]; }; @@ -9464,14 +9854,16 @@ in with self; { ggspectra = derive2 { name="ggspectra"; version="0.3.7"; sha256="0xd8g2m73qa5bd4wk1a81ayy48agqm4h9nadafs3qrcg8wszk8nm"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tibble tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3.5"; sha256="0jz9vvnmcc6a38n8nzr458r65sna23bgn5r8mxdhzdlyqibihr7d"; depends=[ggplot2 plyr rlang withr]; }; ggstar = derive2 { name="ggstar"; version="1.0.2"; sha256="040bbdsfwal4dab2xpzgajxc0p5zsvd3jx56bxa7l59qdw24f0ha"; depends=[ggplot2 gridExtra scales]; }; - ggstatsplot = derive2 { name="ggstatsplot"; version="0.7.2"; sha256="1m9w6pj83jjwa90n8vzcznp9d0aczf16am33hz27ljs2jw154i89"; depends=[dplyr ggcorrplot ggplot2 ggrepel ggsignif insight ipmisc pairwiseComparisons paletteer parameters patchwork performance purrr rlang statsExpressions tidyr]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.8.0"; sha256="089xn6v8s4ahgl01jy7xplzmwrl1zqsyd4800ry66bk3fswl5nhs"; depends=[dplyr ggplot2 ggrepel ggsignif insight ipmisc pairwiseComparisons paletteer parameters patchwork performance purrr rlang statsExpressions tidyr]; }; + ggstream = derive2 { name="ggstream"; version="0.1.0"; sha256="0d6g5916mfrg2srcqjhlpm4acp4g16vq9ks4x37yzkpr34vi5x7j"; depends=[dplyr forcats ggplot2 magrittr purrr tidyr]; }; ggstudent = derive2 { name="ggstudent"; version="0.1.1-1"; sha256="0qs27b4lksaaaspavkycbzf8cfjxjli7xrfjby71sl0lca3fwm1g"; depends=[dplyr ggplot2]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; - ggtern = derive2 { name="ggtern"; version="3.3.0"; sha256="12lxmql9zspglp0baqp419l0vgilrf8lyxsza142bfyvmdbhh6d3"; depends=[compositions ggplot2 gridExtra gtable hexbin latex2exp lattice MASS plyr proto scales]; }; + ggtern = derive2 { name="ggtern"; version="3.3.5"; sha256="15hhn8msy0l8zbq8ms0zvg1iajn1c28gd77v3hp6dvwwsla8zzbd"; depends=[compositions ggplot2 gridExtra gtable hexbin latex2exp lattice MASS plyr proto scales]; }; ggtext = derive2 { name="ggtext"; version="0.1.1"; sha256="0n19dlcys8v7myfyckr6dnq0kx79k3sbh8nwx1jsx8pgzfbi8a2b"; depends=[ggplot2 gridtext rlang scales]; }; ggthemes = derive2 { name="ggthemes"; version="4.2.4"; sha256="0rw5f6axyz1pqn6qx9jwm38hjzn8bqs1nfjkvm96z3xnyn61cdbv"; depends=[ggplot2 purrr scales stringr tibble]; }; + ggtikz = derive2 { name="ggtikz"; version="0.0.1"; sha256="15nq9prfn3h3cv5s6fnr1hcsdr792phwdn4fjixzw1vjm5hks41r"; depends=[dplyr ggplot2 tikzDevice]; }; ggupset = derive2 { name="ggupset"; version="0.3.0"; sha256="079a1fghhbxhkx42ac0n5chmh07i60m2pkdk76frqbbmwrw7inx4"; depends=[ggplot2 gtable rlang scales tibble]; }; - ggvenn = derive2 { name="ggvenn"; version="0.1.8"; sha256="0zyf0faikghrz2lfhh170wxn0a0l8bwp15jn2q6nnpp1wvmh7gim"; depends=[dplyr ggplot2]; }; + ggvenn = derive2 { name="ggvenn"; version="0.1.9"; sha256="0bm52j3idchignp6nrw7c76jlbfkjf5zng258957vq019vx9qxrq"; depends=[dplyr ggplot2]; }; ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; ggvis = derive2 { name="ggvis"; version="0.4.7"; sha256="1qv512pd4x5vmx15y9nvqmabbbw14h75fmi1sjbcg5yl25z0cswy"; depends=[assertthat dplyr htmltools jsonlite magrittr rlang shiny]; }; ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.4"; sha256="1qq5iw1m90s060cffwq8agp5cs4vgzg9i3wbnr6c0p0r081wz4rs"; depends=[deldir ggplot2 raster rgeos sp]; }; @@ -9492,42 +9884,45 @@ in with self; { giftwrap = derive2 { name="giftwrap"; version="0.0.4"; sha256="1zsw529h69x9yaq2csfws4iqn3mm39z34kwzj0b2y850wzbn2dvp"; depends=[namespace processx readr tibble]; }; gigg = derive2 { name="gigg"; version="0.2.1"; sha256="0qb8w455a8wxc5ljmydq4xag2kbj5yk06an0pd9hd4k48wssg8la"; depends=[BH Rcpp RcppArmadillo]; }; gim = derive2 { name="gim"; version="0.33.1"; sha256="1km8pyr1qfzffm33ihhlgvc0qxgxxfi161vkrz77d1b7jkpdyxjj"; depends=[numDeriv]; }; - gimme = derive2 { name="gimme"; version="0.7-5"; sha256="0l8mdl9gp92wd1szx76xni0i1hikm2v7j0p8iwxsyglj4gbv9jli"; depends=[data_tree igraph imputeTS lavaan MIIVsem nloptr qgraph]; }; + gimme = derive2 { name="gimme"; version="0.7-6"; sha256="1ir1bzv8cgnixn3gd5wgy9d5fgah7l0add2p9lqc7clss9gl6p0j"; depends=[data_tree igraph imputeTS lavaan MIIVsem nloptr qgraph]; }; gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; - gimms = derive2 { name="gimms"; version="1.2.0"; sha256="1g656lqrcfyaz3by2mdm0cffdlxvbjpprq1al0shc8p9c32yy7xj"; depends=[curl Kendall ncdf4 raster zyp]; }; + gimms = derive2 { name="gimms"; version="1.2.1"; sha256="1ykc8ji8cyrz5vg9if7lzx5iqm5wvabcyaigfvh014w82i12pfg8"; depends=[curl Kendall ncdf4 raster zyp]; }; giphyr = derive2 { name="giphyr"; version="0.2.0"; sha256="0273f7lama8bhaalafs66m6ksp32vx0j6rmh1qr4484i7wkmdfqn"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; giscoR = derive2 { name="giscoR"; version="0.2.4"; sha256="02sv4dg4chc0wg4ryf8ng23v6b7nv72f81n453a5msg5rz914lmb"; depends=[countrycode geojsonsf lwgeom sf]; }; gistr = derive2 { name="gistr"; version="0.9.0"; sha256="0ac9ikrdg6i8xvlma0gizvsdva46408lk7hvsgkqirhy2ljy02hp"; depends=[assertthat crul dplyr httr jsonlite knitr magrittr rmarkdown]; }; git2r = derive2 { name="git2r"; version="0.28.0"; sha256="1wjmbs9cmm16pm3g0rmqp7cxxyh95m5lgx4fx5bpgj6j466i8vff"; depends=[]; }; git2rdata = derive2 { name="git2rdata"; version="0.3.1"; sha256="0nvx6lfp66l44n3xwkj5biirrzwvl52dssfx8jysqjl1kgfrwwh3"; depends=[assertthat git2r yaml]; }; gitcreds = derive2 { name="gitcreds"; version="0.1.1"; sha256="1snzn7nxy0rwz0bzjsg6k04c0n811dgn8gn9cmn2v78aj57ayjmi"; depends=[]; }; + gitdown = derive2 { name="gitdown"; version="0.1.3"; sha256="0sspwbymzalf4fh180cpjv8mymh8j8v7absnc6mrix2bd89jymsd"; depends=[attempt bookdown dplyr git2r knitr magrittr purrr rmarkdown stringi tidyr]; }; gitear = derive2 { name="gitear"; version="1.0.0"; sha256="139h19yyi7bpkps2vskdnga43ggpgb9fg8jdr7n8vgadxjamv98p"; depends=[dplyr httr jsonlite magrittr mockery Rcpp stringr tibble tidyr]; }; - gitgadget = derive2 { name="gitgadget"; version="0.6.0"; sha256="1rqjzlfnwqqvad8q73akdir0rd48219mvh30yg9k7lp7rnm2wpmz"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; + gitgadget = derive2 { name="gitgadget"; version="0.6.4"; sha256="1vfrxa9v39j661s5dv6p5kgrwyr1drhgi6nykpfcm34mvfsgwk83"; depends=[callr curl dplyr jsonlite markdown miniUI rstudioapi shiny shinyFiles usethis]; }; githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; }; gitignore = derive2 { name="gitignore"; version="0.1.4"; sha256="15rpzb3szx6k5xwf89p3fyzdbk44ahyxgx35jza4ln3pl16hldz1"; depends=[clipr clisymbols crayon curl glue here jsonlite purrr xfun]; }; - gitlabr = derive2 { name="gitlabr"; version="1.1.6"; sha256="1p68w0q8mjpz2hr6ys1qbfw1y4b35hgs27kzfkzv9hfi1vxqfd1h"; depends=[arpr base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; + gitlabr = derive2 { name="gitlabr"; version="2.0.0"; sha256="0snd1pscv09wn3vjvfbvf87dcd43i25m2x3ra8vw37c2zd8hj500"; depends=[arpr base64enc dplyr httr magrittr purrr shiny stringr tibble]; }; gitlink = derive2 { name="gitlink"; version="0.1.3"; sha256="1g34cyx35wlpq42alsayk69x708zxqgvbdndb7j6n1q0rm4vncvd"; depends=[htmltools rlang]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.3.6"; sha256="0snazxi1nw0hr2la15lv4a9blkvrl8g6ji0i0bibbhyyqaj48lhn"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gjam = derive2 { name="gjam"; version="2.3.9"; sha256="08r2c8br70vw5n2k32dmy02vl8rwppdykn4c295jq3gjzg126ylh"; depends=[MASS RANN Rcpp RcppArmadillo]; }; gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; gkgraphR = derive2 { name="gkgraphR"; version="1.0.2"; sha256="1sb52hhpwm3bq7rn2xdq5vly6z1c5yab9a26xzgj3c5s47vk02pa"; depends=[httr ISOcodes jsonlite]; }; gkmSVM = derive2 { name="gkmSVM"; version="0.81.0"; sha256="119g5rhc7ffyviz04r04aj5z1g6abnj3ddd01g7db505sdr6lapj"; depends=[kernlab Rcpp ROCR seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; + glamlasso = derive2 { name="glamlasso"; version="3.0.1"; sha256="0vzkszam7nz40v8pxq06jn3fgwa1nd3s485hgfkcv7r8pg2rp56q"; depends=[Rcpp RcppArmadillo]; }; glancedata = derive2 { name="glancedata"; version="1.0.1"; sha256="01j7syjn33pc7hq032nmyak38wn35yv3n7is9g2ggs14kj3xqb0c"; depends=[dplyr forcats GGally ggplot2 gridExtra openxlsx purrr tibble tidyr]; }; glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; }; glassdoor = derive2 { name="glassdoor"; version="0.8.1"; sha256="0r85k1fyk8979ahfmd4vmzkhyvrlnpkgjwg1yi7092kpx8877lj0"; depends=[httr]; }; glasso = derive2 { name="glasso"; version="1.11"; sha256="02p3612rpydk195n2qr77lp1j2w8zsw1ckkk98c8angm4r5q8dsc"; depends=[]; }; glassoFast = derive2 { name="glassoFast"; version="1.0"; sha256="1sgmh4l06q7mrmgnimphpqgix4k4jzaj2l30kpmnf92caa2v7ngw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; - glca = derive2 { name="glca"; version="1.2.2"; sha256="1365slpm9fmap6bj794x08iahif84kw584arhcgpfq1khsl50b1y"; depends=[MASS Rcpp]; }; + glca = derive2 { name="glca"; version="1.3.1"; sha256="1bbny1r40i2lk0b0zh3rpssmbpwhkcl4fkq5d9ghk449yw0c72mm"; depends=[MASS Rcpp]; }; glcm = derive2 { name="glcm"; version="1.6.5"; sha256="13my6y9jqd86cg5n74p4b8mqbdgwnanxx4qf1rrhm5jxf6sa31qm"; depends=[raster Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.6.2"; sha256="1wrw7i5bq7rb2ahadm57y9fmr697r7lp9ln7ajcd592b0nn60n4i"; depends=[e1071 lmom]; }; gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; - glinternet = derive2 { name="glinternet"; version="1.0.11"; sha256="1lqph2hj0h826gcfyk290ahkfalpnrd6jzymm60xi2qxia14lzk5"; depends=[]; }; + glinternet = derive2 { name="glinternet"; version="1.0.12"; sha256="0aphdscj0s6kqxlkgqkw2d6snrylz6hiis6307pl8ldh7q5cvm33"; depends=[]; }; + glinvci = derive2 { name="glinvci"; version="1.1.4"; sha256="0s8qmrqajsrmzp30xgi49n96ks22dxxa0c5psqkw67n66h39njlh"; depends=[ape BB lbfgsb3c numDeriv plyr Rcgmin rlang]; }; gllm = derive2 { name="gllm"; version="0.37"; sha256="169y3yz947d8qdphqv2a6yrdash6v2h9jfvj2fk7rcpmz0r45kl6"; depends=[]; }; - gllvm = derive2 { name="gllvm"; version="1.3.0"; sha256="0cj45wzcxjsvm4b1c0q2swn9y8lys4gnaxzzsviqpmqkv83mfqfy"; depends=[fishMod MASS Matrix mgcv mvabund mvtnorm RcppEigen statmod TMB]; }; + gllvm = derive2 { name="gllvm"; version="1.3.1"; sha256="1im5q5137jf8cwpydy6p8lip9v43fvgb5hi11ff2wwhc9yw74gyd"; depends=[fishMod MASS Matrix mgcv mvabund RcppEigen statmod TMB]; }; glm_deploy = derive2 { name="glm.deploy"; version="1.0.4"; sha256="1akklvbhz2pp0sv1hax1jq0s9ajbfv1597z643gh5l9hwizj2h9m"; depends=[Rcpp]; }; - glm_predict = derive2 { name="glm.predict"; version="4.0-0"; sha256="12k8rrjvcb5nss5bh1wrh1pfcpcsj635xgksz7lsi3xbryk007ci"; depends=[AER MASS nnet survival]; }; + glm_predict = derive2 { name="glm.predict"; version="4.1-0"; sha256="10grj73lwiv1czim787vq5h4cyn3xl028rs3a8l3l4vbg8z7y6py"; depends=[AER dfidx MASS mlogit nnet survey survival]; }; glm2 = derive2 { name="glm2"; version="1.2.1"; sha256="1byqlvpls23gzy7xlbs1kgfr4bsrmsrpc8rzzacf9czap1nlw39y"; depends=[]; }; glmbb = derive2 { name="glmbb"; version="0.5-1"; sha256="1jy77z5fr781rm5mx6kszwi2zlvnpfwi24fn9vw1kza4jzcw9pjw"; depends=[digest]; }; glmc = derive2 { name="glmc"; version="0.3-1"; sha256="0x6jk2l5rpjkp5x815gpiwv8maa7mhmy6m8gaxbv1cbn3zyccynn"; depends=[emplik]; }; @@ -9542,18 +9937,17 @@ in with self; { glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.1.1"; sha256="1m2dcw522nd78x7z7la7a4cii3030s0bl4sqxbvkxn1k15jf4pr5"; depends=[]; }; glmmSeq = derive2 { name="glmmSeq"; version="0.1.0"; sha256="0mdcwh6vvh4pc64r4jl78dr6x8fwclbbx8s9kf2sj39mm7iqpkqz"; depends=[car gghalves ggplot2 ggpubr lme4 MASS pbapply pbmcapply plotly qvalue]; }; - glmmTMB = derive2 { name="glmmTMB"; version="1.0.2.1"; sha256="1a35hxcxz1cdm3zd5s7fyjaw2qs00hkacgr7h9130amygc1262ab"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; - glmmboot = derive2 { name="glmmboot"; version="0.5.1"; sha256="1q4lp5s00vmymvln4qcsnfgcn918dsvkdhq16h0f94yiqczadsb9"; depends=[]; }; + glmmTMB = derive2 { name="glmmTMB"; version="1.1.2.3"; sha256="1yfwwz2dhd34vgagg8hi7irkqw8padavbc7337jdiwgk3w01wqsm"; depends=[lme4 Matrix nlme numDeriv RcppEigen TMB]; }; glmmfields = derive2 { name="glmmfields"; version="0.1.4"; sha256="0gnb2s34xz7cjyaa2w2wq7n6c5016a14mc03kalvwdv3f7b98zan"; depends=[assertthat BH broom broom_mixed cluster dplyr forcats ggplot2 loo mvtnorm nlme Rcpp RcppEigen reshape2 rstan rstantools StanHeaders tibble]; }; glmmsr = derive2 { name="glmmsr"; version="0.2.3"; sha256="1fbg5zji0xjr9q1yc6phsp37nsrj7nfs8yiri0j9s84wzgwjili1"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; - glmnet = derive2 { name="glmnet"; version="4.1-1"; sha256="0zpfq0m1y5zks5p9r28553ykywwrhrb3ds8m6b7sm6hj4n1c4csd"; depends=[foreach Matrix shape survival]; }; + glmnet = derive2 { name="glmnet"; version="4.1-2"; sha256="1kfd8kfhapx2cxw6qnkbs502c3kya4pd9qmf0mk76cdlq1c2paq6"; depends=[foreach Matrix shape survival]; }; glmnetUtils = derive2 { name="glmnetUtils"; version="1.1.8"; sha256="1k8ivzjgpkm2a948qxx3wmkhlppbk31qc76spv2pscmp24x0lxyn"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.6"; sha256="0cs0yj2js0920iggcw2vci5y9hnsm3hd7wpd7mwnx8mszwrklawg"; depends=[glmnet]; }; glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; glmpathcr = derive2 { name="glmpathcr"; version="1.0.8"; sha256="00hbgp1kdbvihqvx03vv6gq32whrkcfq3n32bbj3cda85dnivlwq"; depends=[glmpath]; }; glmpca = derive2 { name="glmpca"; version="0.2.0"; sha256="02xjf0gg52925hw9nw2j0znfmzfzfwbv0fxjl9d2fy9j63drr2h4"; depends=[MASS]; }; glmtlp = derive2 { name="glmtlp"; version="1.1"; sha256="01kyw0xipyr9z7x9z41wz7rqargzqd8s8ri34ffdvd3ggrdznl0p"; depends=[glmnet]; }; - glmtoolbox = derive2 { name="glmtoolbox"; version="0.1.0"; sha256="14cq9x21ms5is1ks5agzjj7hw0yly0v3s5pazswjmygr2xkh66nk"; depends=[numDeriv Rfast]; }; + glmtoolbox = derive2 { name="glmtoolbox"; version="0.1.1"; sha256="07h09m4n6mhlhcc626s9c28l8cxalnfdg55bl85s7gfyzf1p3hl2"; depends=[numDeriv Rfast robustbase]; }; glmtrans = derive2 { name="glmtrans"; version="1.0.0"; sha256="1r8zgdybl2z9bivcfdmbx2wfpaj82d95gdkaixwzwjknjn50ccyv"; depends=[assertthat caret doParallel foreach formatR ggplot2 glmnet]; }; glmtree = derive2 { name="glmtree"; version="0.2"; sha256="07b7ma38r5cjv6c33q1n2f8xvzn3lj004i8v947pqdhg3fi9wlc6"; depends=[caret dplyr magrittr partykit]; }; glmulti = derive2 { name="glmulti"; version="1.0.8"; sha256="0zviahj99645s1xs2f9z7rnv95x4rdz7mfwzy3qjfw46yqpfj5cn"; depends=[leaps rJava]; }; @@ -9569,45 +9963,48 @@ in with self; { glpkAPI = derive2 { name="glpkAPI"; version="1.3.2"; sha256="1qwq6vbx1symly6k72xgj5qzqw7j6wdsgiflm649pdxnisfgzh00"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; glue = derive2 { name="glue"; version="1.4.2"; sha256="1bgpirdvjrf0da734clrixawvpdap4lpda4g89vais96589m8wwz"; depends=[]; }; - gluedown = derive2 { name="gluedown"; version="1.0.3"; sha256="0wzci7v1rrxa1zkkk5462akqcs183y7ls69wx0adwvqj4k1581d5"; depends=[glue magrittr]; }; + gluedown = derive2 { name="gluedown"; version="1.0.4"; sha256="1rvaac27kc4mppmw9kdwjaqsa7lwfzwffv63c8cky1z0xrsc5zz1"; depends=[glue magrittr]; }; gluvarpro = derive2 { name="gluvarpro"; version="4.0"; sha256="09l9yincr1k5j9wnj3zvfzsffjh3r54aa8fn0ik8vhlbq13ag8kp"; depends=[ggplot2 gridExtra pracma scales tidyr zoo]; }; - glvmfit = derive2 { name="glvmfit"; version="0.0.0"; sha256="1mdxscvpc0cfmzpmswpml28b7kl254awl86mgv0nkgrs8rgrb05k"; depends=[]; }; + glvmfit = derive2 { name="glvmfit"; version="0.1.0"; sha256="1nb34dm4m0nq7cr9f9jsacnk0xjv451m419sdwbk11ykpqkh9cdk"; depends=[]; }; glycanr = derive2 { name="glycanr"; version="0.4.0"; sha256="1ic2v2dim0a8kzl38vx8an80jrbzimng0plrx62a1ps1jnczihl9"; depends=[coin dplyr ggplot2 tidyr]; }; gm = derive2 { name="gm"; version="1.0.2"; sha256="1g0frcfk2ybhhz0sixdmj8h3z61acaxs10ybja60q91mxlyix2zx"; depends=[base64enc glue htmltools knitr magick magrittr MASS rlang rstudioapi stringr]; }; gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; - gmGeostats = derive2 { name="gmGeostats"; version="0.10-7"; sha256="19rpv7dac7gqal7fxk79xa74ifrqqf1wxpzky11ham3pck242rhw"; depends=[boot compositions foreach gstat RColorBrewer sp]; }; + gmGeostats = derive2 { name="gmGeostats"; version="0.10-9"; sha256="0fj45aj5020cs83y6b0k44nw9wdslfsqak76bw30gll8xpr1cy48"; depends=[boot compositions foreach gstat RColorBrewer sp]; }; gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; gmailr = derive2 { name="gmailr"; version="1.0.0"; sha256="0wgh428qrwn6rxkcv9xmpya4ygrmc5pblxp0fw0ddgwbl99dhhi5"; depends=[base64enc crayon gargle httr jsonlite lifecycle magrittr mime rematch2]; }; gmapsdistance = derive2 { name="gmapsdistance"; version="3.4"; sha256="1hazf6xb4ja6h2lrl63kbd78wzny9sljiid9rq1r3szn3l1mc7dn"; depends=[RCurl XML]; }; gmat = derive2 { name="gmat"; version="0.2.2"; sha256="0iq2b3s60fyam45ykk67xyi2yhr8ma1s2vw4059357j1948525p2"; depends=[gRbase igraph]; }; gmeta = derive2 { name="gmeta"; version="2.3-1"; sha256="02w3a8c189wdvcxsnclbgzb6bc9fq88rcw2danxa6i9g7q4kq2sp"; depends=[BiasedUrn binom]; }; gmfd = derive2 { name="gmfd"; version="1.0.1"; sha256="03sag09x7pjyzsp6w1z06108ig068krmw75064cnl3pqfvfyjfgr"; depends=[]; }; - gmgm = derive2 { name="gmgm"; version="1.0.2"; sha256="189pbhpncmf2p2n6wk25jcjk3xcq28mybdwyj9dskixjmidwwaw8"; depends=[dplyr ggplot2 purrr rlang stringr tidyr visNetwork]; }; + gmgm = derive2 { name="gmgm"; version="1.1.0"; sha256="03s67limicwkzlsr4jkhc50fjn6gcifs500cyqjrypljiccjkf1r"; depends=[dplyr ggplot2 purrr rlang stringr tidyr visNetwork]; }; gmm = derive2 { name="gmm"; version="1.6-6"; sha256="16vkb472bjlfccfpl94mz772nbyf76wkwb2shai18jja3fnj3cxi"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3.2"; sha256="01pviab3gyvjdlv5jy7wzp33909znhpn47kar55bwkm6gm3bdlg8"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.18.1"; sha256="0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"; depends=[gdata MASS]; }; gmp = derive2 { name="gmp"; version="0.6-2"; sha256="03kzbflgpy5sgnzxmhshs5qv7jjmfc113ybkhxys4z8y7xdv9z3b"; depends=[]; }; gms = derive2 { name="gms"; version="0.4.0"; sha256="1m7bhy4vsz6l09pal9ibjlskmbyjmc29hqwjim1x8yansd5bxpzv"; depends=[dplyr rlang stringr yaml]; }; gmt = derive2 { name="gmt"; version="2.0.2"; sha256="0z5abh0kw97y90nxkkxxg2xgv1avxijf71v88lwhy25jgv8r7b38"; depends=[]; }; - gmvarkit = derive2 { name="gmvarkit"; version="1.4.1"; sha256="03wn0nwfzv2sdcdhap5bwkiw4jixawpzf9pkm5cpxjkrqhdhdpy3"; depends=[Brobdingnag mvnfast pbapply]; }; + gmvarkit = derive2 { name="gmvarkit"; version="1.5.0"; sha256="1b1c7ppmvns72rk37d7nav6h38hyr6qaqrl0f7j4fh1pz9w377kh"; depends=[Brobdingnag mvnfast pbapply]; }; gnFit = derive2 { name="gnFit"; version="0.2.0"; sha256="0cji4zjslh18dfj0l827r6br4hx2f0akiaxrg7fhhyyyhgdcjnsm"; depends=[ismev rmutil]; }; gnlm = derive2 { name="gnlm"; version="1.1.1"; sha256="1krbz791l5qc06sh6my0bkq420b5afncw87lhyx1yiml2yg46zrk"; depends=[rmutil]; }; gnm = derive2 { name="gnm"; version="1.1-1"; sha256="1lddsdsg43wpg681s906i4xqqfbjdd1qb9ml5dfprb02i1806aa2"; depends=[MASS Matrix nnet qvcalc relimp]; }; - gnn = derive2 { name="gnn"; version="0.0-2"; sha256="0sh9b6d0zvrml7d1bnirxld2lwrgrd7ma3ky7xl71kis0x3fjdq9"; depends=[keras qrng tensorflow]; }; + gnn = derive2 { name="gnn"; version="0.0-3"; sha256="0hk05g8kbsl03wy929y9wnhyfimmkz4yy5qkza2y1v7mcggpjjhx"; depends=[copula keras qrng R6 tensorflow]; }; gnomonicM = derive2 { name="gnomonicM"; version="1.0.1"; sha256="1yv5ry21rv69hfd4wmhnwhvarnp49hn200aws428ahs5wvx3md1v"; depends=[kableExtra minqa triangle]; }; gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; }; gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; }; + goeveg = derive2 { name="goeveg"; version="0.5.1"; sha256="1dg0aw3sfar706jyiy5m5qz3nzs6sy3ljs9jp0p65b0v01rw8sbs"; depends=[fields Hmisc mgcv vegan]; }; gofCopula = derive2 { name="gofCopula"; version="0.4-1"; sha256="17bdrn8xsqjz64caa5wdigkv798i18gc2f9jiin1bz840bqn1abg"; depends=[copula crayon doSNOW foreach MASS numDeriv progress R_utils SparseGrid VineCopula yarrr]; }; gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; - goffda = derive2 { name="goffda"; version="0.0.7"; sha256="183hz0x0d9qh8v2k2qa5ii1g8hpmgl9bpd3dvb9f5v58zmxhgl8h"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; + goffda = derive2 { name="goffda"; version="0.1.0"; sha256="0xxqq6bnc543k7b69ix255x4hv95cy4w2ffiq5v22dal456ggy9m"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; gofgamma = derive2 { name="gofgamma"; version="1.0"; sha256="00wda3fandrd1kkm20fb615g5fd0wykk3s0xn0xh9da28q08yh2m"; depends=[]; }; goft = derive2 { name="goft"; version="1.3.6"; sha256="0ag1bks44hm787sgbab70ab9q0dzbfsx70ldprafjx92gg1cqv5s"; depends=[fitdistrplus sn]; }; goftest = derive2 { name="goftest"; version="1.2-2"; sha256="0ivnkqhv5xgiv05dm648nngacymd8x8g0fyppv3bc0mhcqk9k5z4"; depends=[]; }; gogarch = derive2 { name="gogarch"; version="0.7-2"; sha256="03gpl73zc6kx4gni59xbg7b38dkpd7p4c7kvlqm46f58j257viik"; depends=[fastICA fGarch]; }; goldi = derive2 { name="goldi"; version="1.0.1"; sha256="191ac02bwrxr3khq6qirhxzfhv7pqfhqyg7jb473p5vwygpvc53l"; depends=[dplyr futile_logger magrittr Rcpp RcppArmadillo SnowballC tm]; }; + goldilocks = derive2 { name="goldilocks"; version="0.3.0"; sha256="1h16kfalyklc7i3rix1ml83wjcbi9wv3z3rwxa83gp2h6nfpzpwl"; depends=[dplyr fastlogranktest pbmcapply PWEALL rlang survival]; }; golem = derive2 { name="golem"; version="0.3.1"; sha256="1amasx97ywyp0x7khdwmliaql4cnpc6gsn10rbd128wqcbma504k"; depends=[attempt cli config crayon desc dockerfiler fs here htmltools jsonlite pkgload remotes rlang roxygen2 rstudioapi shiny testthat usethis yaml]; }; gomms = derive2 { name="gomms"; version="1.0"; sha256="1i9d5y28wrhal990x7xxy99v3z9y2pzlakj7wnynd3dpx5pqr0jj"; depends=[]; }; gontr = derive2 { name="gontr"; version="1.1.0"; sha256="0asvpc3nizcn7cqdxr1j9hvhprmrazd8c7a2svhmln4vg9x1zzkp"; depends=[]; }; + good = derive2 { name="good"; version="1.0.1"; sha256="0lgp8kpdiaprq78fzny5c344m2s1vb24y9x9m8rkg1kd769h56pv"; depends=[copula maxLik plyr]; }; goodpractice = derive2 { name="goodpractice"; version="1.0.2"; sha256="08rnm8z0pry5mwpc7p37r6f2rd56dry9djpcvvs9yl170w56psx0"; depends=[clisymbols covr crayon cyclocomp desc jsonlite lintr praise rcmdcheck rstudioapi whoami withr xml2 xmlparsedata]; }; googleAnalyticsR = derive2 { name="googleAnalyticsR"; version="1.0.0"; sha256="0j6ppnxk7qk2x5z89n789blakzcz0q4h61dchh4fg3kbfbv6xly6"; depends=[assertthat cli dplyr googleAuthR httr jsonlite magrittr measurementProtocol memoise purrr rlang tibble tidyr usethis whisker]; }; googleAuthR = derive2 { name="googleAuthR"; version="1.4.0"; sha256="004qbpvsq8ia1i0qdca76ndv14c4p3ajlp7bgfni6709jkg8ka6x"; depends=[assertthat cli digest gargle httr jsonlite memoise rlang]; }; @@ -9621,33 +10018,32 @@ in with self; { googlePublicData = derive2 { name="googlePublicData"; version="0.16.1"; sha256="15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5"; depends=[readxl XML]; }; googleTagManageR = derive2 { name="googleTagManageR"; version="0.1.6"; sha256="1y2avhgvzrpmpyx341di8ml2pdj10y8sdhn7zwjpxgzrxkmf4xxi"; depends=[assertthat dplyr future googleAuthR httr jsonlite purrr]; }; googleVis = derive2 { name="googleVis"; version="0.6.10"; sha256="0jjqlcxfbpkl2kdpp8vr27yi178ryg62yy7rjafzda1npg010f3x"; depends=[jsonlite]; }; - googledrive = derive2 { name="googledrive"; version="1.0.1"; sha256="0qbyl0wyrxmwn9jg0d2s7c1kmmvmx61qbyx3qby4js8dks70f1ls"; depends=[curl gargle glue httr jsonlite magrittr purrr rlang tibble uuid]; }; + googledrive = derive2 { name="googledrive"; version="2.0.0"; sha256="09jsiknzyfgxd0nzdr3wrrjw24allch2x74h96qg8vh8dad4cp30"; depends=[cli gargle glue httr jsonlite lifecycle magrittr pillar purrr rlang tibble uuid vctrs withr]; }; googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; }; googlenlp = derive2 { name="googlenlp"; version="0.2.0"; sha256="0d0g18i3im2s5f14k69ym3vwf9a7zkaval3nwrip97xcl6kf4x9h"; depends=[dplyr httr jsonlite purrr readr rlang]; }; googler = derive2 { name="googler"; version="0.0.1"; sha256="1aayji3ncqxl58k29d93dbx05s9rp9bc63fl2cpl1cys7gilblxx"; depends=[jsonlite tibble]; }; googlesheets = derive2 { name="googlesheets"; version="0.3.0"; sha256="11q07nxys72wkxx9mawmjyf20gvwvrb7h3gpa73h6lgh2vgrwnv8"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tibble tidyr xml2]; }; - googlesheets4 = derive2 { name="googlesheets4"; version="0.3.0"; sha256="04b17cdzah2r92qj7imrdlpfzyxwyf1vx8k1kvsr36nqg383f4b2"; depends=[cellranger curl gargle glue googledrive httr ids lifecycle magrittr purrr rematch2 rlang tibble vctrs]; }; + googlesheets4 = derive2 { name="googlesheets4"; version="1.0.0"; sha256="0yncqwv9l5knyrv88ys5gwcv44hl1j0mbklpins6v7f9m9v7s40a"; depends=[cellranger cli curl gargle glue googledrive httr ids magrittr purrr rematch2 rlang tibble vctrs]; }; googleway = derive2 { name="googleway"; version="2.7.3"; sha256="0n2ybkjwwhq7kpyv0ryz4mp5w06psbcm2gyfwk0d3wp1i43ajsn4"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr scales shiny viridisLite]; }; goric = derive2 { name="goric"; version="1.1-2"; sha256="004nx29wz191rp0naa73r762bf6lap931lwrxifhz7izl47jzfj0"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; - gorica = derive2 { name="gorica"; version="0.1.0"; sha256="09b5i6r2s449gvk0vagvf7kd6y0pgr4cz7hdwplq01x246bhjs6q"; depends=[bain lavaan lme4 MASS mvtnorm quadprog]; }; gotop = derive2 { name="gotop"; version="0.1.2"; sha256="1dvcgz7ha637ixjqmgcwhvl3f9kpx4fdq8im40iz8xwnxqwmrlgx"; depends=[htmltools jsonlite]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; govdown = derive2 { name="govdown"; version="0.10.1"; sha256="00ndpp3v6z2497xlhhc92pa7w93qk9x8m6ibswj9dfh978d07028"; depends=[rmarkdown]; }; gower = derive2 { name="gower"; version="0.2.2"; sha256="0c9n921wn4hhlvjq96r4nkk96s5788376cbldr7y7bwz348200iz"; depends=[]; }; goxygen = derive2 { name="goxygen"; version="1.0.3"; sha256="0825zl16ap0k3jqhrjw4hfsw97ils77jmf4yqq347k3bb8i3dm79"; depends=[citation gms pander stringi yaml]; }; gpairs = derive2 { name="gpairs"; version="1.3.3"; sha256="08m1ydrr239vnhjbl47mng3i2w9bqmd8fijrwsraq5ysvn826n27"; depends=[barcode colorspace lattice MASS vcd]; }; - gpbStat = derive2 { name="gpbStat"; version="0.3.0"; sha256="1mnmhjcnikjsxdvcb5kkh91zhlvj0h40ypazlkafd1z0yfmv52s4"; depends=[]; }; - gpboost = derive2 { name="gpboost"; version="0.6.0"; sha256="0war5nxpynd34r9zqacgwplj6nb9vyyrnpv2mnscil7486lr960q"; depends=[data_table Matrix R6 RJSONIO]; }; + gpbStat = derive2 { name="gpbStat"; version="0.3.4"; sha256="0gfmqb8va6jyi3mx7k5jm3n6cgwghd17rzdsh0xp5dznpxrqim65"; depends=[]; }; + gpboost = derive2 { name="gpboost"; version="0.6.7"; sha256="1q2y4vb3lf0phpgag8mj6wigrkzij4hl5amx1fv7f8b4aypz55xx"; depends=[data_table Matrix R6 RJSONIO]; }; gpclib = derive2 { name="gpclib"; version="1.5-6"; sha256="11jjgg74l8hy9jz4jylhriqnzv8jcf12y1bkx22v29z3fhgkwkps"; depends=[]; }; - gpg = derive2 { name="gpg"; version="1.2.2"; sha256="1qc7w4d6frp0j4yk0q7slkj1mps80bv78lixcpw1shgx48rp41kh"; depends=[askpass curl]; }; - gpindex = derive2 { name="gpindex"; version="0.2.5"; sha256="12jvjqpg2qhcxkynpfcr6ara8y3gll7nyxvkhgvzy6riq0jx227c"; depends=[]; }; + gpg = derive2 { name="gpg"; version="1.2.3"; sha256="1dm68bkwgffb6304q1dzjdd9acih36j5pn8jwkh3a331g23g6jii"; depends=[askpass curl]; }; + gpindex = derive2 { name="gpindex"; version="0.3.4"; sha256="07x49vdhqbdgvdhxr4arpgqz1v4f5fv6ksl157mwm9rqi9cznjcx"; depends=[]; }; gpk = derive2 { name="gpk"; version="1.0"; sha256="1zfhkqyypb24mhbj2zi9qy3gw0kqxvlp8j5ni3zm7k5rz1bnrygg"; depends=[]; }; gplite = derive2 { name="gplite"; version="0.12.0"; sha256="1cm846jayqvb3xrd3h6pxq6wmww1ghhkr6dffschk0xycix6alw9"; depends=[Matrix Rcpp RcppArmadillo]; }; gplm = derive2 { name="gplm"; version="0.7-4"; sha256="0apvj14nl5qbi4dhhdx5nih5lvjwfcipvr8cyk6xsz4r5gfr2iw4"; depends=[AER]; }; gplots = derive2 { name="gplots"; version="3.1.1"; sha256="0f8khaymz383w2ksnk80d4kpnvgmdk37pbycpsnl2vabaz11kbpr"; depends=[caTools gtools KernSmooth]; }; gpmap = derive2 { name="gpmap"; version="0.1.2"; sha256="1n1r4rda9v4zw8zz4vcagmkkpgirwydhqz36pyq0assxwclnkcz0"; depends=[foreach ggplot2 isotone plyr]; }; gppm = derive2 { name="gppm"; version="0.2.0"; sha256="1n9is3xj52lsck2fiy9j320p2ca6ib36s251i7g3iz99a77b0ahh"; depends=[ggplot2 ggthemes MASS mvtnorm Rcpp rstan]; }; - gprofiler2 = derive2 { name="gprofiler2"; version="0.2.0"; sha256="0q8hl3gdxy34c0181ql405fdklz82nfvmwdcafd5mzf935rjpyjg"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly RCurl tidyr viridisLite]; }; + gprofiler2 = derive2 { name="gprofiler2"; version="0.2.1"; sha256="0r0h34b35xzgd9rh55yndn0anxy0z45zdlqa6qfmpn91b6v1bb1g"; depends=[crosstalk dplyr ggplot2 gridExtra jsonlite plotly RCurl tidyr viridisLite]; }; gptk = derive2 { name="gptk"; version="1.08"; sha256="0fk6c8f8fni4y2n2cbfwywlfyz74xlb8lx25wajsxr2v4x74pa7l"; depends=[fields Matrix]; }; gqlr = derive2 { name="gqlr"; version="0.0.2"; sha256="0gzhqyrbnz3qjzkr4slryrlfhlaxm474y9fahlj0sb0hvcx68pxj"; depends=[graphql jsonlite magrittr pryr R6]; }; gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; }; @@ -9656,7 +10052,7 @@ in with self; { grabsampling = derive2 { name="grabsampling"; version="1.0.0"; sha256="031a4ak84k2mbhrmjbai3q8qnf2z3d9rp0xra67x74a99av9lzs9"; depends=[extraDistr ggplot2 ggthemes plyr reshape2]; }; gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; - gradeR = derive2 { name="gradeR"; version="1.0.9"; sha256="052ficcrflplvm79v47hbqlh3z5b4kjq7zjms7i6hv2c3mmvbarr"; depends=[callr jsonlite testthat]; }; + gradeR = derive2 { name="gradeR"; version="1.0.10"; sha256="1ngfrminhsk3155da0vjmvrk66nbnak8p1ns20cw32qayq6wyrr2"; depends=[callr jsonlite testthat]; }; gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; }; grainchanger = derive2 { name="grainchanger"; version="0.3.2"; sha256="1anq9gmbf9cjh6f9q2h7f65j220f56rmb59zhp5j2d26bs7dbnz8"; depends=[checkmate furrr raster sf usethis]; }; grainscape = derive2 { name="grainscape"; version="0.4.3"; sha256="0mc9mgc70ysqal8pjslmr7dzig3d08jcdpba348hmgyh0w9b6s07"; depends=[ggplot2 igraph raster Rcpp rgdal sp]; }; @@ -9665,6 +10061,7 @@ in with self; { granova = derive2 { name="granova"; version="2.1"; sha256="161fznqlnwmw53abmg2n62lhxxda7400ljnadvcdvsm8f6kcjf80"; depends=[car]; }; granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; }; + grapesAgri1 = derive2 { name="grapesAgri1"; version="1.1.0"; sha256="0bsnxk7fqick6y76z6s1kwrg1y8spvg0awmdg5hk37g0f3wxgyas"; depends=[agricolae corrplot desplot dplyr ggplot2 ggpubr gridGraphics gtools Hmisc kableExtra knitr magrittr PairedData pastecs RColorBrewer Rdpack reshape2 rmarkdown shiny shinyWidgets summarytools]; }; graph3d = derive2 { name="graph3d"; version="0.2.0"; sha256="1c4pmx37nf4nm6svrn9dqr50gb2fckx8635zg0n4gnzgdca1iyv4"; depends=[htmlwidgets lazyeval]; }; graph4lg = derive2 { name="graph4lg"; version="1.2.0"; sha256="0bfmi74hsd1hvvxls5a0gqdhxirjdzkjrpnq0p84na6sblmfbja6"; depends=[adegenet diveRsity ecodist foreign gdistance ggplot2 igraph knitr MASS Matrix pegas rappdirs raster Rdpack rmarkdown sf sp spatstat_core spatstat_geom spatstat_linnet stringr tidyr vegan]; }; graphTweets = derive2 { name="graphTweets"; version="0.5.3"; sha256="0jf52lclwvqgybdj6fknzx046bh6jgwxvqs4c5g1ii8f2lsz9y07"; depends=[combinat dplyr igraph magrittr purrr rlang tidyr zeallot]; }; @@ -9675,21 +10072,22 @@ in with self; { graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.4"; sha256="0hfldvw60cac0qdjfdpmx1kbdhhyqw2k0yscyyh886fwr4rvj800"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphkernels = derive2 { name="graphkernels"; version="1.6"; sha256="1gn3ihqz7m0rdvvc2fp7hsgq583wh5cnz7200a2ff89xc04zs3dc"; depends=[igraph Rcpp RcppEigen]; }; graphlayouts = derive2 { name="graphlayouts"; version="0.7.1"; sha256="05v7ss18bflhqa4ipsca8iw2ln8ddbaiyrizx2a5cwq81g5qq3rq"; depends=[igraph Rcpp RcppArmadillo]; }; - graphon = derive2 { name="graphon"; version="0.3.4"; sha256="06y8hz0z6rx6ii4p36js8f85vya3v2834pnghng8adk2ibdlsc1s"; depends=[Rdpack ROptSpace]; }; + graphon = derive2 { name="graphon"; version="0.3.5"; sha256="1x61pdsb3s1vi1iiy9pjq0iz0m5j5b6q3rqhwvx9kvmg4r8yifpv"; depends=[Rdpack ROptSpace]; }; graphql = derive2 { name="graphql"; version="1.5"; sha256="0zi1l93yk5rlgdy4j2nph14w0h8kgvnbzk9fi2jfys8s3fz54ksr"; depends=[jsonlite Rcpp]; }; - graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; - graphsim = derive2 { name="graphsim"; version="1.0.1"; sha256="05v5jhb3fpd5vpb12b203mvs9lx25yhwfg5qavw6rc7pgj5z974i"; depends=[gplots igraph Matrix matrixcalc mvtnorm]; }; - grates = derive2 { name="grates"; version="0.1.2"; sha256="0ygfr53midprqs0ja21mm4g3ppd8gx1azxgzxz8iwp2bdzkrx9cg"; depends=[]; }; + graphsim = derive2 { name="graphsim"; version="1.0.2"; sha256="09is0yr17vxr08zb3p240n0aapm63418dzx4ilwq08y8050jqqr7"; depends=[gplots igraph Matrix matrixcalc mvtnorm]; }; + grates = derive2 { name="grates"; version="0.2.0"; sha256="10b1fazia9ari0czdscyl19kzma180ww7zlbwy1r4c26jylrwkba"; depends=[clock ellipsis rlang vctrs]; }; gratia = derive2 { name="gratia"; version="0.6.0"; sha256="1425dq805a0hk1w243y0mzvdyqvi0n08ghwvsgfwdx3i0d066nba"; depends=[dplyr ggplot2 mgcv mvnfast patchwork purrr rlang tibble tidyr vctrs]; }; graticule = derive2 { name="graticule"; version="0.1.6"; sha256="0y8cyhlfm8amdb23cvxy508mpd4d64xgnk1xlr37ss2pqrxdhpir"; depends=[geosphere quadmesh raster sp]; }; gratis = derive2 { name="gratis"; version="0.2.1"; sha256="035jk2nc8xs0n3ak6k6i42h5gw2n57rrrarb1xwb17khg05dzk25"; depends=[doRNG dplyr foreach forecast GA magrittr mvtnorm polynom purrr shiny tibble tsfeatures tsibble]; }; - grattan = derive2 { name="grattan"; version="1.9.0.4"; sha256="06pzl5s5rgx8xjr0m6wm2p1lsvr7zmafdxxykjzy4m7bws3zhgij"; depends=[assertthat data_table fastmatch forecast fy hutils hutilscpp ineq magrittr Rcpp zoo]; }; + grattan = derive2 { name="grattan"; version="1.9.0.9"; sha256="177mq9iy3p17dzxx8jlw2pnj3fvw9wpiwl66z22534fxm9wrskwm"; depends=[assertthat checkmate data_table fastmatch forecast fy hutils hutilscpp ineq magrittr Rcpp zoo]; }; gravitas = derive2 { name="gravitas"; version="0.1.3"; sha256="11n85bdmigqasbq8c1amj1k7manfvs3gnax2ihsf2vp56s9c463p"; depends=[dplyr ggplot2 ggridges ineq lubridate lvplot magrittr RColorBrewer rlang shiny stringr tibble tidyr tsibble]; }; gravity = derive2 { name="gravity"; version="0.9.9"; sha256="1x912mg7cnday7lji48mw9f5drd732qlnrq4d6d75s5pgfps91p6"; depends=[censReg dplyr glm2 lmtest magrittr MASS multiwayvcov purrr Rdpack rlang sandwich survival tibble tidyr]; }; grec = derive2 { name="grec"; version="1.4.1"; sha256="1vy3idjvayzx9j9pf5bv5bxycjca3w3c4x4lzzbrdi3c97508sa8"; depends=[imagine raster]; }; - greed = derive2 { name="greed"; version="0.5.0"; sha256="181fm85qyi3rsriqnlpp1pzarn7kcfy8ww1fz9rhs6g5vr9gncpz"; depends=[cba future ggplot2 ggpubr listenv MASS Matrix Rcpp RcppArmadillo RSpectra]; }; + greed = derive2 { name="greed"; version="0.5.1"; sha256="1g33wzcld9gh4x7nhbfb022xjrn2lz8dwf4aqir8ymm0sr6cln87"; depends=[cba future GGally ggplot2 ggpubr listenv Matrix Rcpp RcppArmadillo RSpectra]; }; greekLetters = derive2 { name="greekLetters"; version="0.0.7"; sha256="0r6c4y6dnd3mm5i7y5cy7xz3w2j7qkfkkvxg9ig138has6115gjj"; depends=[assertthat stringr]; }; + greeks = derive2 { name="greeks"; version="0.3.1"; sha256="1j89ah5wcy6c3mxq3xh35sanq6idam6ki194c5kmms4sy1z4q472"; depends=[dqrng magrittr matrixStats Rcpp]; }; greenclust = derive2 { name="greenclust"; version="1.1.0"; sha256="198ix55x8cl5wx09p6ahzy3bvig86mvqf2qywjfilp6b4hnjgk7l"; depends=[]; }; + gregRy = derive2 { name="gregRy"; version="0.1.0"; sha256="1b8c8wwp8r2v51ayy7rbav24wfz75z1pylg0p4vsasaw9p06dlbz"; depends=[dplyr magrittr purrr tidyr]; }; gremlin = derive2 { name="gremlin"; version="1.0.1"; sha256="1pi1bksxmjmzclppgbqqg93swf4d72d2mr8bsxv7ndcdjr69xd5r"; depends=[Matrix nlme]; }; gren = derive2 { name="gren"; version="0.0.1"; sha256="1wb5wwdjxi7q36md7xzmbw5lrggcgghkz3pmxipjpxw8kfv804xp"; depends=[glmnet Iso pROC Rcpp RcppArmadillo]; }; greport = derive2 { name="greport"; version="0.7-2"; sha256="1p5x4sar88ss8n1m0c73arac10mq4ircjad38kbin6l0nk9z1mh2"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; @@ -9697,9 +10095,9 @@ in with self; { gretel = derive2 { name="gretel"; version="0.0.1"; sha256="1yyj4aing56f2vy0gshxwb623g9idg8k4701v3s53lqn4m2ybazk"; depends=[Rcpp ResistorArray]; }; gretlR = derive2 { name="gretlR"; version="0.1.0"; sha256="0lpznicpjlvp5kkhmlfr4as7px545k416i3f54900jnc7xa7fm8p"; depends=[knitr]; }; grex = derive2 { name="grex"; version="1.9"; sha256="0s6nan76rrmh3yhgvzb7pqdrzx2w9px8ay4v9yiib4bamy9wmhpb"; depends=[]; }; - greybox = derive2 { name="greybox"; version="0.6.9"; sha256="1isc25k2r54i53hdzfsg2pw2fvfgs7xggk8xh5733hzpfarfl8hf"; depends=[forecast lamW Matrix nloptr pracma Rcpp statmod texreg zoo]; }; + greybox = derive2 { name="greybox"; version="1.0.1"; sha256="0bsdsiycqrykimxvjlr5b5dmvd9zdv29v77hcfg5qf14fqa1zggj"; depends=[lamW nloptr pracma Rcpp statmod texreg zoo]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="1.2.0"; sha256="1i12a5sa1kg0jh50y0r77qy4fca3j1vqrnlblbh8ldpjy07sln47"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; + grf = derive2 { name="grf"; version="2.0.2"; sha256="01dmakzwgpkjqqhfvvgj356zklmqkhfprczb1xg2saknayh22gq4"; depends=[DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridBezier = derive2 { name="gridBezier"; version="1.1-1"; sha256="1n5d6svxblcxpzf79px0qjxsydpwjpnfcagnwk35ljinyd0wv68z"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-1"; sha256="1x1bbyfbyyn13sw5pvnzns6mq57fyq2fywj8hx5k9rhqclzjqxyr"; depends=[graph gridGraphviz gridSVG]; }; @@ -9708,27 +10106,27 @@ in with self; { gridGraphics = derive2 { name="gridGraphics"; version="0.5-1"; sha256="12yswy02j3h5wir7m5jnkhpjmb0sa4snn61vjd68i49qwsa6w219"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; gridSVG = derive2 { name="gridSVG"; version="1.7-2"; sha256="0vxhdz6a759q6q9lpmyjwkvrjr52dfz609jbwrd0pnfyffmmpzh0"; depends=[jsonlite XML]; }; + gridpattern = derive2 { name="gridpattern"; version="0.2.1"; sha256="1akjwjh1ra0f8nhzdvjgzdjiblk3vvw5ws830r4x4s9r2057qmqs"; depends=[glue magick memoise png rlang sf]; }; gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; gridtext = derive2 { name="gridtext"; version="0.1.4"; sha256="131kw7nkfwksviwfifd2kk7lyvhxzzzv1nnj8rahkr3dik3akk61"; depends=[jpeg markdown png Rcpp RCurl rlang stringr xml2]; }; gripp = derive2 { name="gripp"; version="0.2.20"; sha256="0rshipm8rdynl19a4dsvvvlhkd0n4vjfkidwnv5iilc5ini7c4qr"; depends=[GA GenSA usethis]; }; grizbayr = derive2 { name="grizbayr"; version="1.3.1"; sha256="1bsvk52r1zba553x20xkfdjyasyd6r3xrssqb6hrrmkaw6h2qg2m"; depends=[dplyr magrittr purrr rlang tibble tidyr]; }; grmsem = derive2 { name="grmsem"; version="1.1.0"; sha256="0byyl1121acs90xbhgi4g4hnf4n259k7cg5grm6dyaxqkha3lyw7"; depends=[msm numDeriv optimParallel]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; - grobblR = derive2 { name="grobblR"; version="0.2.0"; sha256="0zx2lj7m873v5lkvv521q3vsrdqhzkw0zha63qiicqk896gy7isj"; depends=[dplyr ggplot2 glue gridExtra magrittr png purrr RCurl stringr tibble]; }; + grobblR = derive2 { name="grobblR"; version="0.2.1"; sha256="1l1msh900kmbbszn1f9vfdix4a6180lvs3gfidp9pgkvi2gv2g01"; depends=[dplyr ggplot2 glue gridExtra magrittr png purrr RCurl stringr tibble]; }; groc = derive2 { name="groc"; version="1.0.8"; sha256="0zxwq3ha3sa58v8fhb2s41nqqpsgr3q9j7arlww1zz295mrlrs5i"; depends=[MASS mgcv pls robustbase rrcov]; }; gromovlab = derive2 { name="gromovlab"; version="0.8-3"; sha256="0mm303iiaqfdvr94x765dbd1018cvvl0q4z2zppwk1aif0kb53x8"; depends=[ape cluster glpkAPI igraph quadprog]; }; - groundhog = derive2 { name="groundhog"; version="1.4.0"; sha256="03l5c46k2h0ms2cx7vvdysm0kbbzcvkkppyv1nyfp48rh74a6gia"; depends=[]; }; + groundhog = derive2 { name="groundhog"; version="1.5.0"; sha256="1d1shs518b5x526d07fpsa730bfvljp3vv4v8pbqxln4xk4h5zhi"; depends=[]; }; groupICA = derive2 { name="groupICA"; version="0.1.1"; sha256="1wl828ligvvw55xic383gdn7aq4mbwsnkl4ym6f71jn5g3p36d0i"; depends=[MASS]; }; groupRemMap = derive2 { name="groupRemMap"; version="0.1-0"; sha256="1bfp746j0dx7kk44nyjqmimvgw14par9ayvqxnzldc05qsazjdwx"; depends=[]; }; groupWQS = derive2 { name="groupWQS"; version="0.0.3"; sha256="1c5yrsfgkhbg1fcjbrilfmf0phjry5z34536yfizc8wbc7mmmj0c"; depends=[glm2 MASS rjags Rsolnp]; }; - groupdata2 = derive2 { name="groupdata2"; version="1.4.1"; sha256="0yi64i39f5iw1wrdrxwn56vwcp63favv91s01pramwavnk03p31j"; depends=[checkmate dplyr lifecycle numbers plyr purrr rlang tibble tidyr]; }; + groupdata2 = derive2 { name="groupdata2"; version="1.5.0"; sha256="0ghfv6jwd2mhrgahmy7m197hrfifk86bxkcpwvixrwgzalkgx18j"; depends=[checkmate dplyr lifecycle numbers plyr purrr rearrr rlang tibble tidyr]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; groupedSurv = derive2 { name="groupedSurv"; version="1.0.4.2"; sha256="015av2087i0vxh3axl91crwvparhpc4w2p2j9fq7wylg1gsarraa"; depends=[BH doParallel foreach qvalue Rcpp RcppEigen]; }; - groupedstats = derive2 { name="groupedstats"; version="2.0.1"; sha256="010dx96w49d8sq9mhvps1xqpsir156kj7azc1i7r3wq1x75b0vxr"; depends=[broomExtra dplyr effectsize glue lme4 magrittr parameters purrr rlang skimr tibble tidyr]; }; groupr = derive2 { name="groupr"; version="0.1.0"; sha256="1gych92dpyxg2vfm3h6djw61d9z2n6q2kvbz1xpq1p0zcyiw16gy"; depends=[dplyr purrr rlang tibble tidyr vctrs]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; - growfunctions = derive2 { name="growfunctions"; version="0.14"; sha256="1pvyiw20fxm3l4giyq4iizc67yy36i6wq4ch2qyqg4mfd4bki2g4"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; + growfunctions = derive2 { name="growfunctions"; version="0.15"; sha256="0rj0kypjvqj7wlswzq4kxqizhlw56zgaydf37cbfjm5090h43fzi"; depends=[ggplot2 Rcpp RcppArmadillo reshape2 spam]; }; growth = derive2 { name="growth"; version="1.1.1"; sha256="05yxjlbv1i4ly8yp3aqbxzq1z2mp7sfx7xyqw48qsdv0acqai7jy"; depends=[rmutil]; }; growthPheno = derive2 { name="growthPheno"; version="1.0-30"; sha256="1bvhrnams0x8p9ck1cfm9a1c7m9x80xhw9y24mafzparc2wljyxx"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape stringi]; }; growthcurver = derive2 { name="growthcurver"; version="0.3.1"; sha256="1l3dqcl395nh406s7d5554r5ynk1a7v5ba5kmnv9r7lj7h9nfdjj"; depends=[minpack_lm]; }; @@ -9739,58 +10137,58 @@ in with self; { grpSLOPE = derive2 { name="grpSLOPE"; version="0.3.0"; sha256="0v20v3rdjmz517rl86nkrsaa1dl2p49kdkgk7ynv92p2ib37wwga"; depends=[Rcpp]; }; grplasso = derive2 { name="grplasso"; version="0.4-7"; sha256="0jf48ahc6d6biwx235dlvbk1papxkqbcnvxsr93p5047pjm02y3a"; depends=[]; }; grplassocat = derive2 { name="grplassocat"; version="1.0"; sha256="0pi5vq7yqg0ha91y6296ckshxyq3135cg6zcs9x6xba5m5024k4p"; depends=[grplasso]; }; - grpreg = derive2 { name="grpreg"; version="3.3.1"; sha256="1985afwzlydr82xy5siawfs87k041iv6l76xhb5yfpx4klnj0zph"; depends=[Matrix]; }; - grpsel = derive2 { name="grpsel"; version="1.0.0"; sha256="0hdxcbh6rnvrhlgwy8csip4k5xlaynhxkyasi0pv37mz25am812k"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + grpreg = derive2 { name="grpreg"; version="3.4.0"; sha256="1bfnahkb249996m3qmf96g4ldgnw7xfcm2wr45ccrlk3mw5x4mzx"; depends=[Matrix]; }; + grpsel = derive2 { name="grpsel"; version="1.1.1"; sha256="1nzxkbrv58d3rdqdk4db4r927zmb88fb1w0ak2b7lbyda87farld"; depends=[ggplot2 Rcpp RcppArmadillo]; }; grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; grt = derive2 { name="grt"; version="0.2.1"; sha256="1dw5rjs82r82l6qryyyq9cczm770v4iv60d7pi1nb4b0733ndbd5"; depends=[MASS]; }; - gsDesign = derive2 { name="gsDesign"; version="3.2.0"; sha256="0w1gr4k2sl46q8wr84zgpc5aj0ir2yizp7bahjv5himrvyq0wjv3"; depends=[dplyr ggplot2 magrittr rlang tidyr xtable]; }; - gsEasy = derive2 { name="gsEasy"; version="1.3"; sha256="00471kfjb6zw3n4nbx3a91xjn748hw3xpl9pq5sgbrf6xg9gcf7c"; depends=[ontologyIndex Rcpp]; }; + gsDesign = derive2 { name="gsDesign"; version="3.2.1"; sha256="09chif5shwyq47rbhr1cwdfcncxj746shwbd4ldgcslrz2xcbdf7"; depends=[dplyr ggplot2 magrittr rlang tidyr xtable]; }; + gsEasy = derive2 { name="gsEasy"; version="1.4"; sha256="1m3vrwcbkswr0b6rzyydxaibda6lv1m9kmxm9yh2sphk4mdwqxxj"; depends=[ontologyIndex Rcpp]; }; gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-5"; sha256="0nmn4hlvhl8dw7pkpf010x9qjd6w8drdlcj47qv0sap8wngrwhzg"; depends=[MASS]; }; - gsbDesign = derive2 { name="gsbDesign"; version="1.0-1"; sha256="0wb62y4fcca1qq27kgk59qxm1nx5njcs94cr8x1bsnk88z945p9p"; depends=[gsDesign lattice]; }; gsbm = derive2 { name="gsbm"; version="0.2.1"; sha256="16j4g0wl9phmx85dbrzxsdjcv0nnipgj214fvbz9m6n66khr5pkp"; depends=[doParallel foreach Matrix RSpectra softImpute]; }; gscaLCA = derive2 { name="gscaLCA"; version="0.0.5"; sha256="12zksjp0wh95qg7vxh22z652hk35r9sp0qxrms4y1laixa8vr71x"; depends=[devtools doSNOW fastDummies fclust foreach ggplot2 gridExtra MASS nnet progress psych stringr]; }; - gscounts = derive2 { name="gscounts"; version="0.1-3"; sha256="1xcsvnam858l9am30mmqb6m0vcflijhli22ix8g56rcvfsh208q1"; depends=[Rcpp]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; gsheet = derive2 { name="gsheet"; version="0.4.5"; sha256="0b8q44cqkjfy6vnffm94czq4ag8xfbxik52026ahq95kcf9v2j91"; depends=[httr stringr]; }; - gsignal = derive2 { name="gsignal"; version="0.3-1"; sha256="0qs934ijykwyk7fx0n9m0861349mbpgq0i5kymsxcglrdc8q6k4m"; depends=[pracma Rcpp]; }; + gsignal = derive2 { name="gsignal"; version="0.3-2"; sha256="1yw3srky82wqwvbjdfdd718ay965qnrwq7lnflzdg1j0f7nxj6iw"; depends=[pracma Rcpp]; }; gsisdecoder = derive2 { name="gsisdecoder"; version="0.0.1"; sha256="1h7a9j4gsdk8nasfkzfizlarx335ra0j0yz98a2000v2qzm2a5qy"; depends=[Rcpp]; }; - gsl = derive2 { name="gsl"; version="2.1-6"; sha256="0p4rh7npp6qbfc5sxjq86xjn7c9ivf3pd60qf1hldwckjqin7m7m"; depends=[]; }; + gsl = derive2 { name="gsl"; version="2.1-7"; sha256="05rvky8sh3jrlz0xbd6nss8h8ykfg1v10dymhlmcykl6v5csz1hs"; depends=[]; }; gsloid = derive2 { name="gsloid"; version="0.1.0"; sha256="1ma5si86ynfsis0pnw8hyv6xc4frbkhy5ks03mr0z16gasffkycg"; depends=[]; }; gsmoothr = derive2 { name="gsmoothr"; version="0.1.7"; sha256="00z9852vn5pj04dhl3w36yk0xjawniay6iifw1i7fd8g98mgspxp"; depends=[]; }; + gsrs = derive2 { name="gsrs"; version="0.1.1"; sha256="0x5fll59l000dqszy0gmhsfqgpaljc57j1grqg5c7y1p3vji38in"; depends=[doParallel foreach MASS]; }; gsrsb = derive2 { name="gsrsb"; version="1.1.1"; sha256="0yjxzc69ihsx5ni6jb4shsvl9vskqlls3gmpckmzx5nsh1l5s5vb"; depends=[ldbounds mvtnorm xtable]; }; - gss = derive2 { name="gss"; version="2.2-2"; sha256="1r0zq8ingrjkd775nkmr8jixzmx0sasfha4nzw677vkq8f4xm90x"; depends=[]; }; + gss = derive2 { name="gss"; version="2.2-3"; sha256="0jr45lkpcndg5nynjsfnxn1wwkh4gkhsgv4hlvw6jn2frw0n8c14"; depends=[]; }; gstar = derive2 { name="gstar"; version="0.1.0"; sha256="1582f7jcphb32j3wdc345qa5sgm2xyimlc6r5r5jay7ca5ll8c98"; depends=[dplyr ggplot2 reshape2 xts zoo]; }; gstat = derive2 { name="gstat"; version="2.0-7"; sha256="17d95f4s49a8v197ij8ppvl55fc63v1z2qsisniw8hl17gj7q6z8"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; - gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; }; - gsynth = derive2 { name="gsynth"; version="1.0.9"; sha256="1m9s3gymm0z6frfzmz7kv8cbdnla2vp4aam5b2zzcxwflzwbplm3"; depends=[abind doParallel foreach GGally ggplot2 MASS mvtnorm Rcpp RcppArmadillo]; }; - gt = derive2 { name="gt"; version="0.2.2"; sha256="0krxs7fvwkaadkpw8g3h8slijmssibqcg5smh7xwzgrzpaiglwwx"; depends=[checkmate commonmark dplyr fs ggplot2 glue htmltools magrittr rlang sass scales stringr tibble tidyselect]; }; + gsw = derive2 { name="gsw"; version="1.0-6"; sha256="1sqxxbghsii5lph4r9j6w752zd95xxi2hwfbz6d7jxsplwyyfz0l"; depends=[]; }; + gsynth = derive2 { name="gsynth"; version="1.2.1"; sha256="1a4s8ghxc5zw295ys8hp22nx93gc1vyakn7r1dcq3ghikh02nzaa"; depends=[abind doParallel doRNG foreach future GGally ggplot2 lfe MASS mvtnorm Rcpp RcppArmadillo]; }; + gt = derive2 { name="gt"; version="0.3.1"; sha256="06b029z32za010pfjj1pp5nqjamc58k87nxj5fsx2mpi8vjgxlfx"; depends=[base64enc bitops checkmate commonmark dplyr fs ggplot2 glue htmltools magrittr rlang sass scales stringr tibble tidyselect]; }; gt4ireval = derive2 { name="gt4ireval"; version="2.0"; sha256="1d567iz57xqszm45l1wq4n2qrrmyz8ssll1vllfmncb9ibbnx4f3"; depends=[]; }; gtWAS = derive2 { name="gtWAS"; version="1.1.0"; sha256="1kbkz0iwc3gfj982m93m2wdr1xm5rhy70k6bdc7kms9ivh5fh6sh"; depends=[]; }; gtable = derive2 { name="gtable"; version="0.3.0"; sha256="1lyncxf2dqdjgw1071cn9c8zwzkz6sldnd5cgmicf70bc726qf7x"; depends=[]; }; gtcorr = derive2 { name="gtcorr"; version="0.2-1"; sha256="1n56zmyv58jwr95p453jb86j82pdnq57gfc8m15jndjc9p31zl0m"; depends=[]; }; gte = derive2 { name="gte"; version="1.2-2"; sha256="1x528iakyjhh4j92cgm6fr49a3rdi4cqy28qhsfr2dwvxzxchl6h"; depends=[survival]; }; - gtfs2gps = derive2 { name="gtfs2gps"; version="1.4-1"; sha256="18505hkgjlk14ldp0l9k2s9mg4z0zri08qdwja933z4mkw5kcjjs"; depends=[data_table furrr future lwgeom magrittr pbapply progressr raster Rcpp readr rgdal rgeos sf sfheaders sp units zip]; }; - gtfsio = derive2 { name="gtfsio"; version="0.1.0"; sha256="0wxrp5km6gxv8i4l8ah2yzbfwbgc6shaxyr6hs1dppch1sa7xknr"; depends=[data_table zip]; }; - gtfsrouter = derive2 { name="gtfsrouter"; version="0.0.4"; sha256="1hzln0a8lmsk5ia37w75dcbcfc61ykf39qd5b0xyfzhkm3fih0cv"; depends=[cli data_table Rcpp]; }; + gtfs2gps = derive2 { name="gtfs2gps"; version="1.5-4"; sha256="0hqqi4gm6zbrys0yd0ayyas2pxfx4r98fi45rfmdzffrx8qd0p9r"; depends=[data_table furrr future gtfsio lwgeom magrittr pbapply progressr raster Rcpp readr rgdal rgeos sf sfheaders sp units]; }; + gtfsio = derive2 { name="gtfsio"; version="0.2.0"; sha256="1mvz89hxlx6darqg84ly7218d3p7i4gchcgy031p12qgxs7ydxq4"; depends=[data_table zip]; }; + gtfsrouter = derive2 { name="gtfsrouter"; version="0.0.5"; sha256="0yxgc4pi0g2wqswvwba0ij263i8b8p6wgsy6hbvklq0gim616shi"; depends=[cli data_table geodist Rcpp]; }; gtfstools = derive2 { name="gtfstools"; version="0.1.0"; sha256="02v455r1a9rf2hqpw0a547jvbx6hrb26jwhjx68spmh9rrc5zpkz"; depends=[checkmate data_table sf sfheaders units zip]; }; gtheory = derive2 { name="gtheory"; version="0.1.2"; sha256="1xc1jl69z5csalqk3hx83s53awcl1fjq6p0x2pczhs7dsvwd6lks"; depends=[lme4]; }; - gtools = derive2 { name="gtools"; version="3.8.2"; sha256="1pnwy412wvhhvnnx8qg6s9hrgcnsfhnfcpf2560ipipk845acfsh"; depends=[]; }; + gtools = derive2 { name="gtools"; version="3.9.2"; sha256="0lx97yafrms2mjym8rhcq5586z7s1iqgy8qfm4px3xl1yn5qkc83"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; gtrendsR = derive2 { name="gtrendsR"; version="1.4.8"; sha256="00qzwlasi6l56raf4d7w3287qzhmq5j3aqi7zcxv11kl33nbnams"; depends=[anytime curl ggplot2 jsonlite]; }; - gtsummary = derive2 { name="gtsummary"; version="1.4.0"; sha256="1a41r7ad2ssawwkq10qk07mj7nnv73l2rhwr7fl3adxzabimkh72"; depends=[broom broom_helpers cli dplyr forcats glue gt knitr lifecycle purrr rlang stringr survival tibble tidyr]; }; - guaguas = derive2 { name="guaguas"; version="0.1.0"; sha256="10f5kbd03szx2pmmcm2zjjv8zkm0hdf0lk3s91yk40x80s2bxccs"; depends=[tibble]; }; + gtsummary = derive2 { name="gtsummary"; version="1.4.2"; sha256="08j1pmkxiafm89x6nwdczkknmvi5p0zagvbfafzh9rprgl3mis9z"; depends=[broom broom_helpers cli dplyr forcats glue gt knitr lifecycle purrr rlang stringr survival tibble tidyr]; }; + guaguas = derive2 { name="guaguas"; version="0.2.0"; sha256="1b5bmjd3l9npmjlmd3qq3kxcrm1dqv8m60s89fcybjlaf0942ms8"; depends=[]; }; guardianapi = derive2 { name="guardianapi"; version="0.1.1"; sha256="17xmmr6pfzhdnmf45jzvk84gbfnmlw1qfv1gqjaw85vgm8b6jn6l"; depends=[dplyr httr jsonlite rlang tibble]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; guf = derive2 { name="guf"; version="1.0.2"; sha256="1dfmja2da211pcid4hr7x9q0sgz37756rpykm1ax862avdl8hsmc"; depends=[]; }; guiplot = derive2 { name="guiplot"; version="0.1.0"; sha256="0h14ki1lwr9gln9yqhg2y81sgnz60sjy31cygxplapf215xbmjs2"; depends=[DT ggplot2 magrittr R6 rlang shiny svglite]; }; gumbel = derive2 { name="gumbel"; version="1.10-2"; sha256="0s9idcrssnl683abwky9zvqylciy0b51z935yfvb2bm8b0b0b4ij"; depends=[]; }; + gumboot = derive2 { name="gumboot"; version="1.0.0"; sha256="0c31rxkq08wzycwiwii7q166pzwfbdg35259rymwy0g38pnjnjp6"; depends=[dplyr ggplot2 hydroGOF lubridate ncdf4 reshape2 stringr]; }; gunit = derive2 { name="gunit"; version="1.0.0"; sha256="0vmm47f21n9f334aj38gzrmv1c4sp76njk95ld9gv6fcfxgsipyh"; depends=[magrittr stringr tibble units]; }; gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; }; - gustave = derive2 { name="gustave"; version="0.4.1"; sha256="1sdfx3zmnamdwgnyvs3rn38wmwiyww1a620jyfc984b9r2zqvd1w"; depends=[Matrix]; }; - gutenbergr = derive2 { name="gutenbergr"; version="0.2.0"; sha256="0m7j68zcm0aikjpavmw1yfdph68jqhm1665bl64n276675m98i3w"; depends=[dplyr lazyeval purrr readr stringr urltools]; }; - gvc = derive2 { name="gvc"; version="5.2.0"; sha256="15z4r8xkz0alabh3z278hylz042f2r5cqdllc5n3hfx5q3ch19xx"; depends=[decompr diagonals]; }; + gustave = derive2 { name="gustave"; version="0.4.2"; sha256="1pg8lpsc9n6zjq8gidljs5mmdbmkax5kpcc7m3yhgs518zp32gki"; depends=[Matrix]; }; + gutenbergr = derive2 { name="gutenbergr"; version="0.2.1"; sha256="0rsk583x4i1ac6rbxr5f5cmczr4525bkv20jw7777n8fwn91zvyr"; depends=[dplyr lazyeval purrr readr stringr urltools]; }; + gvc = derive2 { name="gvc"; version="6.0.0"; sha256="0sn2rhab39biqbmab7z12wkyar5h44hzdvds94ybyb1dgcsa3sfl"; depends=[decompr diagonals]; }; gvcR = derive2 { name="gvcR"; version="0.1.0"; sha256="0r54924b9a65k11p8y3p7jxbvmpb7s7vs87v65hhl98gxacj5hk8"; depends=[dplyr eda4treeR lme4 magrittr]; }; gvcm_cat = derive2 { name="gvcm.cat"; version="1.9"; sha256="1kwfcmnl1ivv1lh3zxccwls2xfyx3l8v71ngc0bg6441i81d4xp5"; depends=[MASS Matrix mgcv]; }; gvlma = derive2 { name="gvlma"; version="1.0.0.3"; sha256="16dhd407bwjs91c3p9kk43646197s7n9vbyghxb4ckrpv3fsaxp0"; depends=[]; }; @@ -9803,10 +10201,10 @@ in with self; { gwpcormapper = derive2 { name="gwpcormapper"; version="0.1.2"; sha256="0wlr8iw9hb06va9nswiz5335gi9af2mg0gh5w13kkr8knz4c7d9f"; depends=[attempt config corpcor crosstalk dplyr DT geodist glue golem htmltools leaflet pkgload plotly processx Rcpp sf shiny shinydashboard shinyjs viridis]; }; gwrpvr = derive2 { name="gwrpvr"; version="1.0"; sha256="0x15nv2pfv99c04lgs6q6hgczarld34xc4aqw9bn179m7j02v6m3"; depends=[]; }; gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; - gwsem = derive2 { name="gwsem"; version="2.1.0"; sha256="0b27bns30y948bfy40009c4f4n10m5irl94g576gasydpj36ia47"; depends=[BH data_table lifecycle OpenMx qqman Rcpp]; }; + gwsem = derive2 { name="gwsem"; version="2.1.2"; sha256="0678p3xxbkdyz5gs097pjykk9cviyn9h16cbwfk5kpxxrs3ry3x3"; depends=[BH data_table lifecycle OpenMx qqman Rcpp]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; - h2o = derive2 { name="h2o"; version="3.32.0.1"; sha256="0rmba0yn1ghh9201rn8q948bkx3wi0gwvavwn51h5kxfwj0in5l6"; depends=[jsonlite RCurl]; }; - h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; + h2o = derive2 { name="h2o"; version="3.32.1.3"; sha256="16sglvb5zcmz9k9md0kmirm2rj15s5f7x1l23vsxryx2a633iwq8"; depends=[jsonlite RCurl]; }; + h2o4gpu = derive2 { name="h2o4gpu"; version="0.3.3"; sha256="004sskj3a1mzjfh86m0rq02z1f3kd6650bzv1d3j8pj0xdmqb86c"; depends=[magrittr reticulate]; }; hBayesDM = derive2 { name="hBayesDM"; version="1.1.1"; sha256="16ilkmhyb7lgfd8s2qhjg952gfwkmfg154w4nw306j988a2ivc6h"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; hIRT = derive2 { name="hIRT"; version="0.3.0"; sha256="0s0i6p9iv0yv0l15dnwkpcmc91751jyjs1y1nz671lz6jpb8rz5c"; depends=[ltm Matrix pryr rms]; }; hJAM = derive2 { name="hJAM"; version="1.0.0"; sha256="1pnjcn54zi4d7h9zc9wr1gv51dzb0vasfcrw4c1kqymhxsq2yfh3"; depends=[dplyr ggplot2 ggpubr reshape2]; }; @@ -9819,32 +10217,34 @@ in with self; { hacksaw = derive2 { name="hacksaw"; version="0.0.2"; sha256="1ls4l53bsaxyd6lwka9z9sb6ypa2ymbxpfxhsj9k966031jv2vk3"; depends=[dplyr magrittr purrr rlang tibble tidyselect zeallot]; }; hadron = derive2 { name="hadron"; version="3.1.2"; sha256="04qd3lb6im5shf24ss88jkskab1rwn7m2d94x0ybbmfcg3l5dhm0"; depends=[abind boot dplyr R6 Rcpp stringr]; }; hagis = derive2 { name="hagis"; version="3.1.1"; sha256="15hv1ib516i4bkjr5d6xqagzjs9vd8hv7nylq29h57kxms0mddzl"; depends=[data_table ggplot2 pander]; }; - hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; + hakaiApi = derive2 { name="hakaiApi"; version="1.0.0"; sha256="0wk0qmg2g1hj6bsvhr5xys02l32adn1qypv8rdma643qfvlcp46c"; depends=[httr R6 readr tibble]; }; hal9001 = derive2 { name="hal9001"; version="0.2.7"; sha256="0hbrsyw2245bi967iza9ywiw3d4b3533gjsa9nryzivrf6lazb3g"; depends=[assertthat data_table glmnet Matrix origami Rcpp RcppEigen]; }; haldensify = derive2 { name="haldensify"; version="0.0.6"; sha256="086p3an0m3mccf14p6bl6s01xvh24wkb4p39vgdyrsf83318d0h8"; depends=[assertthat data_table future_apply ggplot2 hal9001 matrixStats origami Rdpack]; }; halfcircle = derive2 { name="halfcircle"; version="0.1.0"; sha256="1gbqbv3cn8w09i3f2ji3qq0snb4fy9243y12agw686fx46dfmhxs"; depends=[scales]; }; hamlet = derive2 { name="hamlet"; version="0.9.6"; sha256="076fh28grlrv38qywshi79m84jsz1ck9k4n0rg4svvr3gqkdbcn2"; depends=[]; }; handlr = derive2 { name="handlr"; version="0.3.0"; sha256="0l0jwlslz2pyg7q447k56acfhgmx5njsriqdrwd02zzbsc3g6wm5"; depends=[crul jsonlite mime urltools xml2 yaml]; }; + handwriter = derive2 { name="handwriter"; version="1.0.1"; sha256="1jq65dzvjpjrvhw76asmh8qghdzfgisvdn43hc0hmkj90nj6aaap"; depends=[ggplot2 igraph magick png randomForest Rcpp RcppArmadillo reshape2 rjson shiny stringr]; }; handyplots = derive2 { name="handyplots"; version="1.1.3"; sha256="0pcl0iichdw2lkv8y00mv6n6c0rvrnsk75ka5lwm2g7b64pphsvk"; depends=[]; }; hans = derive2 { name="hans"; version="0.1"; sha256="0hh2nlzxs2kj93yb7yfm873m6nymjw5qmkin3qqn3acza6dr0k6q"; depends=[Rcpp]; }; hansard = derive2 { name="hansard"; version="0.8.0"; sha256="00mcy58nhlphb0v0wchbaw1qamm0435s09nxxw6rr5z872rhyf5a"; depends=[dplyr jsonlite lubridate snakecase tibble tidyr]; }; hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; - haplo_stats = derive2 { name="haplo.stats"; version="1.8.6"; sha256="1imz4gs0n57vixwwbirrihpgvn2pyj5da4rgjcjk14n2xkk0nay7"; depends=[arsenal rms]; }; - haploR = derive2 { name="haploR"; version="4.0.2"; sha256="1s9019683fgp6sxxjigr5rkpkdj3lxn576a8w067sh6k66138w31"; depends=[DT httr plyr RCurl RJSONIO RUnit tibble XML]; }; + haplo_stats = derive2 { name="haplo.stats"; version="1.8.7"; sha256="1q2zn72j92bwhcdswk4qqfgzch56p9pcy2xhkd3safvqp3l9rzpw"; depends=[arsenal rms]; }; + haploR = derive2 { name="haploR"; version="4.0.6"; sha256="1cg92v64xdzmr5hbjhd11rz6rkdddsxcxkqdgbj5hd1ldqsrjj45"; depends=[DT httr plyr RCurl RJSONIO RUnit tibble XML]; }; haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; haplotypes = derive2 { name="haplotypes"; version="1.1.2"; sha256="07grdwli0kxnnnf7mg8z7gjpny88h71vf867g50f08yybgb46y70"; depends=[ape network phangorn plotrix sna]; }; happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; }; happytime = derive2 { name="happytime"; version="0.1.0"; sha256="03iblwb6w2dh9sibfi4nlswidck13hzsn7123838zp4sxfnrp041"; depends=[]; }; hapsim = derive2 { name="hapsim"; version="0.31"; sha256="0jw6iw89d4y8wjy58biv40szp123ql7frz1mmdjdxljmwaby963h"; depends=[MASS]; }; - hardhat = derive2 { name="hardhat"; version="0.1.5"; sha256="1b7f9i9fy39j9n03g40vd6nzgq9fgq914xg3svf84najlknvjzly"; depends=[glue rlang tibble vctrs]; }; + hardhat = derive2 { name="hardhat"; version="0.1.6"; sha256="07mx8c24gy0xfmip9hb5w29gp10sfnpnilzc1pi0hjadnrqz8mks"; depends=[glue rlang tibble vctrs]; }; harmonicmeanp = derive2 { name="harmonicmeanp"; version="3.0"; sha256="17irfw8788yhh36698p9w8wab6wcin1yzfinlbs3gdg70d42zcnd"; depends=[FMStable]; }; + harmony = derive2 { name="harmony"; version="0.1.0"; sha256="0jkj9y4j6ja2d6y5j0akmkkgpppprk65i6bwwhs163g918i8qng0"; depends=[cowplot dplyr ggplot2 irlba Matrix Rcpp RcppArmadillo RcppProgress rlang tibble tidyr]; }; harrietr = derive2 { name="harrietr"; version="0.2.3"; sha256="0n6vsqysj4ijh06z6nqmj8x1z4w9711dxhbfp8p8fwi0l75pj0cj"; depends=[ape dplyr ggtree lazyeval magrittr rlang tidyr]; }; harrypotter = derive2 { name="harrypotter"; version="2.1.1"; sha256="1j3sv0rpp4lcrf09j4a3an4lkwi2x1z18iv62fk6c2kpp9b14b8r"; depends=[ggplot2 gridExtra]; }; hash = derive2 { name="hash"; version="2.2.6.1"; sha256="0b3fl0rvgwb992knl81vm99lsldg5clvaqjh6mamm6zqmb6dz056"; depends=[]; }; hashids = derive2 { name="hashids"; version="0.9.0"; sha256="0233qly4rb1g4znxm9h9h8gskzrjyav6nd26xkdl7990m5hcbcwh"; depends=[]; }; - hashr = derive2 { name="hashr"; version="0.1.3"; sha256="0xbwzhvg77ch4na9ylb8y8nghmpy38dxcvn4g6g6adarm3lbm4ck"; depends=[]; }; - hasseDiagram = derive2 { name="hasseDiagram"; version="0.1.3"; sha256="1r9z6jc9lbdj2xc81gpnbswrl8rhs8zrlsnypfrny40g3j402iap"; depends=[graph Rgraphviz]; }; - haven = derive2 { name="haven"; version="2.4.1"; sha256="1san6dc7kg2wy6f1jr5p1br28zdrand8wwgg7p6xxnx45h773320"; depends=[cpp11 forcats hms readr rlang tibble tidyselect vctrs]; }; + hashr = derive2 { name="hashr"; version="0.1.4"; sha256="10rvq4rvg7fds2ylh21lri4wlvj870bncqq7kma7rf89rg5x1jz6"; depends=[]; }; + hasseDiagram = derive2 { name="hasseDiagram"; version="0.2.0"; sha256="1ni4wzj8g6qmpgz1xj62vawkcpm3jr4jqqr1xaxlh5nzbj9fn57h"; depends=[graph Rgraphviz]; }; + haven = derive2 { name="haven"; version="2.4.3"; sha256="0pr9jcdk1r9pi9iz0xm1g5yy5qyjk5r7hh9467abx4kpwx3hzdwm"; depends=[cpp11 forcats hms readr rlang tibble tidyselect vctrs]; }; hawkes = derive2 { name="hawkes"; version="0.0-4"; sha256="1ghwq3icxwmrai3xn9r8cnvlh3z3j18lznhw1bm31h9mkkp2dk0a"; depends=[Rcpp RcppArmadillo]; }; hawkesbow = derive2 { name="hawkesbow"; version="1.0.2"; sha256="0abbarpwlbasgmp0cr8144x2aqkmqf2i99pqd9g9sp9bxbg66056"; depends=[BH nloptr Rcpp RcppArmadillo]; }; hazer = derive2 { name="hazer"; version="1.1.1"; sha256="1d1qj6mamgxlvxq2hjik69zfzackjz5819iss98jf5gdbdngw41x"; depends=[]; }; @@ -9866,13 +10266,13 @@ in with self; { hdd = derive2 { name="hdd"; version="0.1.0"; sha256="0hnqjfp78s8fiabibf0dl57sj170ri1ysf7pyrk45z4qsnizbyn2"; depends=[data_table fst readr]; }; hddplot = derive2 { name="hddplot"; version="0.59"; sha256="18llkpawm12cjxlcrlra60m16virfpjqiaqkvy9mb3wq1zif61rh"; depends=[MASS multtest]; }; hddtools = derive2 { name="hddtools"; version="0.9.4"; sha256="011yhs8c6riimz63pa2am56n5aip2yk5gryx2amvk29pzp1v6my9"; depends=[curl raster readxl rgdal sp tidyr XML zoo]; }; - hdf5r = derive2 { name="hdf5r"; version="1.3.3"; sha256="0i8m4yjxggrs05slq2afvz2ckl1yc9wq7gd1s7dq2gjn46zkry50"; depends=[bit64 R6]; }; - hdfqlr = derive2 { name="hdfqlr"; version="0.6-1"; sha256="1z8sylaaki8ab9k7m4hp3530rnkxjh39zvw4n962fw5fb9a11dx3"; depends=[]; }; - hdi = derive2 { name="hdi"; version="0.1-7"; sha256="1q58bvlqh59hv3vb3dw92r0w1nwyifnqm5ccss54fzmf2gjsj1cj"; depends=[glmnet linprog MASS scalreg]; }; + hdf5r = derive2 { name="hdf5r"; version="1.3.4"; sha256="0lxbdw1xf5yp82fkdj4wzp5mslay3qxd65459vh09dj131h5gl34"; depends=[bit64 R6]; }; + hdfqlr = derive2 { name="hdfqlr"; version="0.6-2"; sha256="07lfr0vblahh3xhckwmzbmlja0janb73qkl4663mqgp6xk21jmi1"; depends=[]; }; + hdi = derive2 { name="hdi"; version="0.1-9"; sha256="0k35zqz58lcx5p7ijhks4j7kqp553zggvrx4lh6k4s85lp601x22"; depends=[glmnet linprog MASS scalreg]; }; hdiVAR = derive2 { name="hdiVAR"; version="1.0.1"; sha256="0rq5vsi0s3y9rkkzijkicrlg55vjqklniizmx4dqs3ib18jbh94l"; depends=[abind lpSolve]; }; hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; hdm = derive2 { name="hdm"; version="0.3.1"; sha256="1kibfc1fc94y1vk06nn0yfvpdzcm30a1jn89lqqfma70x5jpa25s"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; - hdme = derive2 { name="hdme"; version="0.3.3"; sha256="1i6ixzl8kkj7jlj5q40xhbblw5a64fq0gfy6z6174fn2h8f4dqkj"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; + hdme = derive2 { name="hdme"; version="0.3.4"; sha256="0hm41zy4pxqh71bb2ahcnad6484qk4ak43sd43ix1jrqgrqczm5a"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; hdnom = derive2 { name="hdnom"; version="6.0.0"; sha256="0wszxxfz5xkyqd3xgc9g3d5iwwsfkq9517bgp416h6l31ynxxrwn"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized survAUC survival]; }; hdpGLM = derive2 { name="hdpGLM"; version="1.0.0"; sha256="04mn0cbbx66218rsd273yh29h28f1xl8k0whwlyn6hrg035mlk0x"; depends=[coda data_table dplyr formula_tools ggjoy ggplot2 ggpubr ggridges Hmisc isotone LaplacesDemon magrittr MASS MCMCpack mvtnorm purrr questionr Rcpp RcppArmadillo rprojroot stringr tibble tidyr tidyverse]; }; hdpca = derive2 { name="hdpca"; version="1.1.5"; sha256="0xcakpnp363lz98y3h87p1yhj0gs3f94gx2i8kz4mcizn1ll5xbd"; depends=[boot lpSolve]; }; @@ -9880,14 +10280,16 @@ in with self; { hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; healthcareai = derive2 { name="healthcareai"; version="2.5.0"; sha256="05qsmgrnaagnavlrs9c6j01j9c3lcc9j7cmbrx3y6lb6pf4zs195"; depends=[caret cowplot data_table dplyr e1071 generics ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; healthfinance = derive2 { name="healthfinance"; version="0.1.0"; sha256="163zhdd5mqp0q872dmr3xzw2ppapnwp46rr7vkkfnglz635nxvpz"; depends=[ggplot2 lubridate readr scales shiny tibble]; }; - healthforum = derive2 { name="healthforum"; version="0.1.0"; sha256="13ih00amv9hrpngm6pxc8vzqzhx8c0yqgaprxdcp5li90lg5r3av"; depends=[magrittr purrr rvest stringr tokenizers xml2]; }; - healthyR = derive2 { name="healthyR"; version="0.1.2"; sha256="0mfgrspd8j0ywhcjcwbpjd11slmfgsbisis0a48jvqm0br9c76x6"; depends=[cowplot dplyr ggplot2 lubridate magrittr purrr rlang scales sqldf stringr tibble timetk writexl]; }; + healthyR = derive2 { name="healthyR"; version="0.1.6"; sha256="1px9c0i0qf0b85nbwjv0cccy2viqvi6c2pd1vx3s6yncj3vx3a5x"; depends=[cowplot dplyr ggplot2 ggrepel lifecycle lubridate magrittr plotly purrr rlang scales sqldf stringr tibble tidyr timetk writexl]; }; + healthyR_ai = derive2 { name="healthyR.ai"; version="0.0.2"; sha256="1gvqanwzdimp093yvvrf2f542n3jgz1wah53bgsl954bd3vp4yaz"; depends=[broom dplyr forcats ggplot2 ggrepel h2o magrittr parsnip purrr recipes rlang rsample tibble tidyr timetk]; }; healthyR_data = derive2 { name="healthyR.data"; version="1.0.1"; sha256="18b7aqdy9a0ldf2ib2d0a07k6bfmgdp61y8hl8yl19v35nqj6dvh"; depends=[]; }; - healthyR_ts = derive2 { name="healthyR.ts"; version="0.1.1"; sha256="16kafzg8zykwbraxciz2yn1iz7is0bn7bqszsnffs5206a92hhvn"; depends=[dplyr ggplot2 healthyR_data lubridate magrittr modeltime modeltime_ensemble modeltime_resample plotly purrr rlang stringr tibble tidyquant timetk]; }; - healthyverse = derive2 { name="healthyverse"; version="1.0.0"; sha256="17xiqjvsfzy450vsxhr5dnydwcl88qqgfqhpy7za4c46q6c2f70p"; depends=[cli crayon dplyr healthyR healthyR_data healthyR_ts magrittr purrr rlang rstudioapi tibble]; }; + healthyR_ts = derive2 { name="healthyR.ts"; version="0.1.3"; sha256="03aafqdbr378nsfn326jzbwpahga2bkh3b5l532q36dlk1dbdc5n"; depends=[cowplot dplyr earth forcats ggplot2 lubridate magrittr modeltime parsnip plotly purrr recipes rlang stringi tibble tidyquant tidyr timetk workflowsets]; }; + healthyverse = derive2 { name="healthyverse"; version="1.0.1"; sha256="088vf0va382341jri9y8p5ygdz76jv3fnjf6y0ldf535grifb3dc"; depends=[cli crayon dplyr healthyR healthyR_ai healthyR_data healthyR_ts magrittr purrr rlang rstudioapi tibble]; }; + heapsofpapers = derive2 { name="heapsofpapers"; version="0.1.0"; sha256="1b88ff4j6rh0qif43iyb12wipkkjmp5qx33qfzgffr5m54df4kfy"; depends=[aws_s3 curl dplyr fs magrittr rlang scales]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; heatmap3 = derive2 { name="heatmap3"; version="1.1.9"; sha256="0sfvizmmwfk1bjhn6zfx5a4qqfgj1ldg8x90b65crqibgfa36k2r"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; + heatmapFlex = derive2 { name="heatmapFlex"; version="0.1.2"; sha256="0va8ac2wf1mzm6zamhfpid3xkm7310c6b695c5wbc705nwijnd9q"; depends=[Biobase Heatplus RColorBrewer]; }; heatmaply = derive2 { name="heatmaply"; version="1.2.1"; sha256="0hspfkninwy62sf8gkdcsvwnvl66bbnjs2dpah9rr95a3rsgdp9d"; depends=[assertthat colorspace dendextend egg ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; heatwaveR = derive2 { name="heatwaveR"; version="0.4.5"; sha256="0pcw305mxxy1abp4n9kh59gqd0axnlhhagnzzm5cfp2m5zs343iy"; depends=[data_table dplyr ggplot2 lubridate plyr Rcpp RcppArmadillo RcppRoll tibble]; }; heavy = derive2 { name="heavy"; version="0.38.196"; sha256="05k788ynw9fhhmjydzp8dbk1vhl44j2rz2shqwn02i40jmwdvwrk"; depends=[]; }; @@ -9899,24 +10301,24 @@ in with self; { helixvis = derive2 { name="helixvis"; version="1.0.1"; sha256="113rnpnrcnw18ks78fgq79zdrw3kmpzpimlc45gvj0za2fbyci3p"; depends=[ggforce ggplot2 rlang]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; - helminthR = derive2 { name="helminthR"; version="1.0.8"; sha256="1fy2pwqirpa6ja035sb6a7779ikix4klxdad82bjzhcsxj8s9irv"; depends=[httr knitr magrittr plyr rvest taxize xml2]; }; - helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; + helminthR = derive2 { name="helminthR"; version="1.0.9"; sha256="1s5vxpii1zryflafqxn0fwx3xnkbi2115f36fd7jq9l9y7grpqz9"; depends=[httr magrittr plyr rvest taxize xml2]; }; + helsinki = derive2 { name="helsinki"; version="1.0.3"; sha256="0059qngnfmxgk4rkcf80m9ynvpvhj5myb836f5bi2n5a23sfkq3i"; depends=[curl dplyr httpcache httr jsonlite purrr sf sp xml2]; }; heplots = derive2 { name="heplots"; version="1.3-8"; sha256="0ziws8l74svz5swyk9i0db5lsdhnkx0gjc5hdvk31m145cg29w5x"; depends=[car MASS]; }; here = derive2 { name="here"; version="1.0.1"; sha256="0srlr8h8qmr0wrmp7gs4g2ry5dni2hx8n947bik3s3a26f091v88"; depends=[rprojroot]; }; - hereR = derive2 { name="hereR"; version="0.7.0"; sha256="0f40dnd3yqw6bhj6dp57iismvj0kl1dcxi4yh47byzakl1w58c2m"; depends=[crul curl data_table flexpolyline jsonlite sf stringr]; }; - hergm = derive2 { name="hergm"; version="4.1-7"; sha256="0q05383xj4fprg2j4nm73rc19vwnvcg9kl4w28zlqih3kkybwv0h"; depends=[ergm igraph intergraph latentnet Matrix mcgibbsit mlergm network Rcpp sna stringr]; }; + hereR = derive2 { name="hereR"; version="0.7.1"; sha256="1d46ym533vwkwn6lk0sslicjpn2znps7msix78q3bir05q9as3b3"; depends=[crul curl data_table flexpolyline jsonlite sf stringr]; }; + hergm = derive2 { name="hergm"; version="4.1-8"; sha256="1razjdiv33wrfkqsb234aw9j2sw049jnw9758jwjp48j8566d8k6"; depends=[ergm igraph intergraph latentnet Matrix mcgibbsit mlergm network Rcpp sna stringr]; }; heritEWAS = derive2 { name="heritEWAS"; version="0.2.0"; sha256="0yss9vf2m9szq8xi5i2nhf85mfvzvhv6c1f4kvvb2z9lmaicjni5"; depends=[]; }; heritability = derive2 { name="heritability"; version="1.3"; sha256="0a0pw8hppkgypl4jaa38hks9nxfwz2zbsd4w6w40j1hxlyy4km8m"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; hermiter = derive2 { name="hermiter"; version="2.0.3"; sha256="0vq39kfr8hpxsijg6452bx47yzaqqv69mx612pp97z0a0kllg2a2"; depends=[BH Rcpp]; }; hero = derive2 { name="hero"; version="0.4.7"; sha256="129v2pjbxm5aalr5lfx0kh20rhwksnb80pc459pxg0xkwxvy1l3d"; depends=[fields Matrix optimx pbapply rgeos sp]; }; - hesim = derive2 { name="hesim"; version="0.5.0"; sha256="0hha6z0hwlpjd7vgn4wdpvrv85h7nnx9gy9g7wcclnx6w3irmdih"; depends=[data_table flexsurv ggplot2 MASS msm R6 Rcpp RcppArmadillo survival]; }; - hetGP = derive2 { name="hetGP"; version="1.1.3"; sha256="02anpqpvzmlk7hbprzb2laya2xz4n249jbk941w72fm4xc2ci4nf"; depends=[DiceDesign MASS Rcpp]; }; + hesim = derive2 { name="hesim"; version="0.5.1"; sha256="0w79ka88bafkcs7bjsyl7z2v44cd4xjv3xqyk764jamzfcfhanzq"; depends=[data_table flexsurv ggplot2 MASS msm R6 Rcpp RcppArmadillo survival]; }; + hetGP = derive2 { name="hetGP"; version="1.1.4"; sha256="1nm4kkg0jwlp21flviiw187jih4y1s6lqn3j0f2s1h81rh1vvvzf"; depends=[DiceDesign MASS Rcpp]; }; hett = derive2 { name="hett"; version="0.3-3"; sha256="0i7q28nc67m62vi1ipfg035yqjh691fb1mp33dp1b68g5wjysphh"; depends=[lattice MASS]; }; hettreatreg = derive2 { name="hettreatreg"; version="0.1.0"; sha256="092xd2yndg5n5shxmcyn2gh6a6w1i1497cvj009ih3ax8hk3crf0"; depends=[]; }; hettx = derive2 { name="hettx"; version="0.1.1"; sha256="0zfxg88l83pzj37c5khpv4vi0v28fdnp0p8yz39scm8d8lya1dkm"; depends=[doParallel dplyr foreach formula_tools MASS moments mvtnorm plyr purrr quantreg tidyverse]; }; hetu = derive2 { name="hetu"; version="1.0.1"; sha256="1blxfvi3cy6w8m72lrgz81s90aw3h01visgi2ghg3abyh1qq4an2"; depends=[]; }; - heuristica = derive2 { name="heuristica"; version="1.0.2"; sha256="1wqdwggnma6p667ivr0xja4vvn3jgzbkc5whkkijmdmxpjzg1wz6"; depends=[Hmisc]; }; + heuristica = derive2 { name="heuristica"; version="1.0.3"; sha256="1j88sviy6yabh5prab0f1snnicbg843kbwyawakj3xx3p43v23lb"; depends=[Hmisc]; }; heuristicsmineR = derive2 { name="heuristicsmineR"; version="0.2.4"; sha256="0dp85yvn0fr22l174ff34pv9xfxh3d7na9dxim2z7f4ialdnialw"; depends=[BH bupaR data_table DiagrammeR dplyr ggplot2 ggthemes magrittr petrinetR processmapR purrr Rcpp rlang scales stringr tidyr]; }; hexSticker = derive2 { name="hexSticker"; version="0.4.9"; sha256="0d9sz2cshn4lq18kd9fkgvjm3v29h0k22b6228rq2q3zhxi97ra0"; depends=[ggimage ggplot2 hexbin showtext sysfonts]; }; hexView = derive2 { name="hexView"; version="0.3-4"; sha256="01hiqyibsd4as7jcklzg09pl12la341mg561vn16z4jzdarfvkfc"; depends=[]; }; @@ -9928,15 +10330,17 @@ in with self; { hglm_data = derive2 { name="hglm.data"; version="1.0-1"; sha256="0mw1s0kahsh9jmwkxysfy5f7vbld7mpzmdnnww6im5h21jhnczx2"; depends=[MASS Matrix sp]; }; hgm = derive2 { name="hgm"; version="1.18"; sha256="0d0s4hkn46cg85wl7nmjn707iw38kjs69p6xz33pzc1yf51l8z7w"; depends=[deSolve]; }; hgutils = derive2 { name="hgutils"; version="0.2.7"; sha256="1svxhz80h84wn1fj58p8g3rp553ima1wfdbbkm2cqnihwjxhha62"; depends=[crayon dplyr limSolve magrittr stringr]; }; + hhcartr = derive2 { name="hhcartr"; version="1.0.0"; sha256="104xy3ihpi031pyzifnpc0jfq68gsbc12gzv6hp1vjrgy0nqw5l1"; depends=[bookdown captioner checkmate DiagrammeR DiagrammeRsvg ggplot2 hash Matrix rsvg]; }; hhh4contacts = derive2 { name="hhh4contacts"; version="0.13.1"; sha256="1cqwn09iqgh6131cm4b5j0kx7k5vil0ak42v064g4maayj0yqy7p"; depends=[surveillance]; }; hhi = derive2 { name="hhi"; version="1.2.0"; sha256="1yl52c3nqdi8v60sr01l0vv8359803dm2i4c9ifazgj3h3a4h0yp"; depends=[ggplot2]; }; + hhsmm = derive2 { name="hhsmm"; version="0.1.3"; sha256="1xxyssaa7s4v2dnihvz57zb20zav048wb46ihabqxzq418k2ghbv"; depends=[CMAPSS MASS mvtnorm Rcpp Rdpack]; }; hht = derive2 { name="hht"; version="2.1.4"; sha256="0i4rjr507k555pvf7q6y6b3df56rjc6igrv8dk0mhyfws49jw9m9"; depends=[EMD fields spatstat spatstat_core spatstat_geom spatstat_linnet]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; hier_part = derive2 { name="hier.part"; version="1.0-6"; sha256="15wlpb2rsn6am8galsbjiy4psp78nlv1x2hz3cnqbwj508w6gsj0"; depends=[betareg gtools MASS]; }; hierBipartite = derive2 { name="hierBipartite"; version="0.0.2"; sha256="1f6agxrv363wksi33b29v42hys90351ninb4li9m52n0kzv25m1f"; depends=[irlba magrittr]; }; - hierDiversity = derive2 { name="hierDiversity"; version="0.1"; sha256="1n4jg003h9hvr2n43jwxgfpazvc5ij5lqvspxi49w8fpzpcrqrjj"; depends=[]; }; hierNet = derive2 { name="hierNet"; version="1.9"; sha256="0fdnj50s985w06wrjc67hcy6fc4lj8jbxlskgrli9m0181vbdj69"; depends=[]; }; + hierSDR = derive2 { name="hierSDR"; version="0.1"; sha256="164l7gw5bkg09mfs0rnqwfsbgr4mppc0skbmqk2d98mcvvmmcwd7"; depends=[lbfgs locfit MASS Matrix numDeriv optimx]; }; hierarchicalDS = derive2 { name="hierarchicalDS"; version="3.0"; sha256="16d6l3y21nhynfjk4swp3pnjr6vhcxq369djgxz907zsjby35gkz"; depends=[coda ggplot2 Matrix mc2d MCMCpack mvtnorm rgeos truncnorm xtable]; }; hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; }; hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; }; @@ -9944,14 +10348,16 @@ in with self; { hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; }; highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; }; highDmean = derive2 { name="highDmean"; version="0.1.0"; sha256="0z81iw1nb8y4pvmhk8ay9pq4kvqxwxwv8q6p47hy8s2b465sfy1f"; depends=[]; }; + highMLR = derive2 { name="highMLR"; version="0.1.0"; sha256="1pb3fgycbrvzbd27p9hmq7wq9b8dbdb3r4q81nr9nnk2d5v00nai"; depends=[coxme dplyr gtools missForest mlr3 mlr3learners mlr3proba survival tibble]; }; highSCREEN = derive2 { name="highSCREEN"; version="0.4"; sha256="1nd4jayfhz89kpk4i7s3n3wlza1ik4w3gspplnjmfz951f8i3wlg"; depends=[gplots]; }; highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; highcharter = derive2 { name="highcharter"; version="0.8.2"; sha256="1hwiifpm60kqgxlvp8zd6mhgbzc4mkcz9s9yc6byrm9i6daiqs8r"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rjson rlang rlist stringr tibble tidyr xts yaml zoo]; }; - highfrequency = derive2 { name="highfrequency"; version="0.8.0.1"; sha256="16gb6gj1wda1r5kb1mc5h95w5ir4989mhlprlmfclvbz0pf86ilj"; depends=[cubature data_table mvtnorm numDeriv quantmod Rcpp RcppArmadillo RcppRoll robustbase Rsolnp sandwich xts zoo]; }; + highfrequency = derive2 { name="highfrequency"; version="0.9.0"; sha256="1p3bvhqc71vmb1zcjr5b27lwppx355bgz8578ivz404p1ays4m0w"; depends=[cubature data_table mvtnorm numDeriv quantmod Rcpp RcppArmadillo RcppRoll robustbase Rsolnp sandwich xts zoo]; }; highlight = derive2 { name="highlight"; version="0.5.0"; sha256="1shar4y07wyixg0ichdrn2xhgwkl3mv2pxkalqzisc69w605b3hf"; depends=[]; }; highlightHTML = derive2 { name="highlightHTML"; version="0.2.5"; sha256="0j3zrvil7k5wfsbgfj2b4nbx77qsj3b4makv5angcf8s59p7q80r"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; highr = derive2 { name="highr"; version="0.9"; sha256="0kgdv2vf1lz3b5kbal9s83gg6812nw7fvrq0rkyr0v4k1lwi3zxy"; depends=[xfun]; }; + highriskzone = derive2 { name="highriskzone"; version="1.4.6"; sha256="1nl3l7zq4j0vmkflkl716519llpbixjfknvb6razrrdwi6mml250"; depends=[deldir fields ks maps Matrix mvtnorm rgeos spatstat spatstat_core spatstat_geom]; }; higlasso = derive2 { name="higlasso"; version="0.9.0"; sha256="09d500jsxlrv658i90xnb2wj1ad89v1iwb6y7vascyvg3cff104h"; depends=[gcdnet gglasso purrr Rcpp RcppArmadillo]; }; higrad = derive2 { name="higrad"; version="0.1.0"; sha256="0q9av8qyvmvgy6a3l7svcmbkjjgnp4iny1cld4g3qsbaz3yp3jaj"; depends=[Matrix]; }; hilbertSimilarity = derive2 { name="hilbertSimilarity"; version="0.4.3"; sha256="1251df3q7c7c69f8q9y9bxj210bk2dh80c8ca4s58isf0hr2x7zp"; depends=[entropy Rcpp]; }; @@ -9959,13 +10365,14 @@ in with self; { hillR = derive2 { name="hillR"; version="0.5.1"; sha256="0yz2f3zz28k36f6afya5cg7k6kvyz6nzafr53pw6liy086nfrb9n"; depends=[ade4 ape FD geiger plyr tibble]; }; hilldiv = derive2 { name="hilldiv"; version="1.5.1"; sha256="1jp4xvrpqd575y2x0i73s0bq708bzi6gdhqgz85bia6d5kf05lq9"; depends=[ape data_table FSA geiger ggplot2 ggpubr qgraph RColorBrewer scales vegan]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; - himach = derive2 { name="himach"; version="0.1.2"; sha256="07gsyjlhz5li9qmvx7jjfxcp60b707hyasqwcczw10xxp9mykczf"; depends=[cppRouting data_table dplyr geosphere ggplot2 lwgeom s2 sf sp tidyr]; }; + hillshader = derive2 { name="hillshader"; version="0.1.0"; sha256="12phdpkjc4gyk9ri33x86dzxb03llhpqf43vin9ssfr23sbblnqh"; depends=[raster rayshader scales]; }; + himach = derive2 { name="himach"; version="0.2.1"; sha256="0znaxg11l7l5b40paiprg07264bna8wi5xsicbsk6h50pdxh4wx2"; depends=[cppRouting data_table dplyr geosphere ggplot2 lwgeom s2 sf sp tidyr]; }; hindex = derive2 { name="hindex"; version="0.2.0"; sha256="01mcd2br33qqkfcyxl584f3l6kyb2cgzpd207p0mynzdaallgxgc"; depends=[foreach ggplot2 purrr]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; hiphop = derive2 { name="hiphop"; version="0.0.1"; sha256="0k071kxf04b95f3z5y2h9dhnqrvzwgyhi3q26ghn3s76c155f1k1"; depends=[]; }; hipread = derive2 { name="hipread"; version="0.2.2"; sha256="1y51yif2spl6brqjvb20k9r6xwkr5f6brv08qcl4g9xg561yngff"; depends=[BH R6 Rcpp rlang tibble]; }; - hisse = derive2 { name="hisse"; version="1.9.18"; sha256="0r231nq71b69zsibmiwi1y7zsw7z6i2gkxp9nyxar59319q2vax2"; depends=[ape data_table deSolve diversitree GenSA nloptr phytools plotrix subplex]; }; + hisse = derive2 { name="hisse"; version="1.9.19"; sha256="00b36r1aqbjajzinka4bbzf99bn7cf66i56z8da1cxlh7gqdx05f"; depends=[ape data_table deSolve diversitree GenSA nloptr phytools plotrix subplex]; }; histmdl = derive2 { name="histmdl"; version="0.7-1"; sha256="0k6l3pfjzlgpxv55vy8dg4sl8zhh0460xcfszwp2k9sbzanwaamp"; depends=[]; }; histogram = derive2 { name="histogram"; version="0.0-25"; sha256="0yymc7fw4qkbigr8jiw2nzjyrw0ikkipz62pdn3bpz1f7nb7mi93"; depends=[]; }; historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; }; @@ -9974,11 +10381,11 @@ in with self; { hitandrun = derive2 { name="hitandrun"; version="0.5-5"; sha256="18zbyv7y7sv7g075swwbx6gmxf468vyl41d2cvq3am5c1rwhw1d4"; depends=[rcdd]; }; hive = derive2 { name="hive"; version="0.2-2"; sha256="0ihghpfsk73lndrfrk5907kdsih9s0a7xq23zcyfaa05nk98510n"; depends=[rJava XML]; }; hkclustering = derive2 { name="hkclustering"; version="1.0.1"; sha256="19syq06y5dl0mcwyaxr7w1hj8ffp5s140j72djcz0lljhskzmp6f"; depends=[cluster]; }; - hkdatasets = derive2 { name="hkdatasets"; version="0.0.3"; sha256="0sfgqr6g9nk3v6df9hssavk4pn7ax837xflg1kgyxpvqssn8iiyl"; depends=[]; }; + hkdatasets = derive2 { name="hkdatasets"; version="1.0.0"; sha256="1a594fgwc5bvimwp5m2zpb6pjy4iavcylxdmsq3hrnh9ll5g5582"; depends=[fst]; }; hkevp = derive2 { name="hkevp"; version="1.1.4"; sha256="01m5yywi4vjnwhdayaqaqcp5lz70mllj5ifnwdb4c60wm9aby9pm"; depends=[Rcpp RcppArmadillo]; }; hkex_api = derive2 { name="hkex.api"; version="0.1"; sha256="0hqwihlrppchpaz2yaq92gf779yi5k8n7sxy1kbpjxs2qc18xvj2"; depends=[httr RCurl XML]; }; hlaR = derive2 { name="hlaR"; version="0.1.0"; sha256="1xk3b0wkwybx0n3bnyxb9jmnqk9vfxs1fcsbpx7lq7xvbv5j8x7n"; depends=[devtools dplyr here purrr readr readxlsb reshape2 schoolmath stringr tibble tidyr tidyverse usethis]; }; - hlidacr = derive2 { name="hlidacr"; version="0.1.3"; sha256="042fwsx57d2c73x17iwhx18jm65kzivp4cx3s7gi56zxxg3jzpdx"; depends=[curl glue httr jsonlite purrr stringr urltools usethis]; }; + hlidacr = derive2 { name="hlidacr"; version="0.2.0"; sha256="02l86bvb4w8wdq9mk9zh5wkf5i5y5jlgld0ciz851p5ra70c395p"; depends=[curl glue httr jsonlite purrr stringr urltools usethis]; }; hmclearn = derive2 { name="hmclearn"; version="0.0.5"; sha256="0zalvgnibd1kygryqcah5d008y6a0nxpy61yyiqsriw89r01jyjk"; depends=[bayesplot MASS mvtnorm]; }; hmeasure = derive2 { name="hmeasure"; version="1.0-2"; sha256="0l4nlny532kddiaa1nmgd37971whhwzb54mb1pvbwax7fsg6hmhw"; depends=[]; }; hmgm = derive2 { name="hmgm"; version="1.0.3"; sha256="12gaz2pi9ny7y772yzrfvl02p3n89cq1l5dzmcksd172gv9ayyz1"; depends=[binaryLogic glmnet MASS Matrix nat Rcpp rgl]; }; @@ -9987,14 +10394,17 @@ in with self; { hmm_discnp = derive2 { name="hmm.discnp"; version="3.0-6"; sha256="0jb4ga50d0qy9kz13qjsbwbvyhn8qiqsjsai2m6kvxb7qzd33g26"; depends=[nnet]; }; hmma = derive2 { name="hmma"; version="1.1.0"; sha256="1qsvczqq44h46z0nfblv4rarbg64imz8m0jhxdhva27kbzdvqf97"; depends=[bnlearn graph MCMCpack mhsmm Rgraphviz]; }; hmmm = derive2 { name="hmmm"; version="1.0-4"; sha256="1sbr85lcmcw3lv0ygqwfbarr91dp3br1xnlygy49145cvl93nfci"; depends=[MASS mvtnorm nleqslv quadprog]; }; - hms = derive2 { name="hms"; version="1.0.0"; sha256="0qn9lvpkqrpxck88nf0zbff43vd7d6s1ibg58qfr3w14sw1yj14p"; depends=[ellipsis lifecycle pkgconfig rlang vctrs]; }; - hmstimer = derive2 { name="hmstimer"; version="0.1.0"; sha256="1b2k18gm9fka8hsm1hhhplk7gj6w9s3sjh686kxbrci3a4mcb0g5"; depends=[hms lifecycle]; }; + hmmr = derive2 { name="hmmr"; version="1.0-0"; sha256="1m0jmw0i66hm5z5rycvpdmasq8zhgsz91km491n0n923mm480hmh"; depends=[depmixS4]; }; + hms = derive2 { name="hms"; version="1.1.0"; sha256="1kmlw5hs2c69qgkkipjxb6j05wdk6jiqrac3y4z9ds63c3r9lng8"; depends=[ellipsis lifecycle pkgconfig rlang vctrs]; }; + hmstimer = derive2 { name="hmstimer"; version="0.1.1"; sha256="02vz4n70g1a2vpa7qdflnqa0wx25wzgkbjdqm4abf7d8h9a9qa8j"; depends=[hms]; }; hnp = derive2 { name="hnp"; version="1.2-6"; sha256="12cbc353ipr2rcc93skf1766g38j1pvpdkqk3cswv0cxsjl2x7pl"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4.1"; sha256="152vz6cddphmxvm7vi6f3b7jjpib0nsb6qv2k1wrmfrpvv3hgsxx"; depends=[statmod survival]; }; hoardeR = derive2 { name="hoardeR"; version="0.9.4-2"; sha256="1jdxfalmi4p7gwb7jndxbzbklv1fk0c57shnl4jz27s81lndg437"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools_fileHandler httr IRanges KernSmooth knitr MASS R_utils RCurl rmarkdown Rsamtools S4Vectors seqinr stringr XML]; }; hoardr = derive2 { name="hoardr"; version="0.5.2"; sha256="0m6wfs78jpxk2jnlqdbg5x7i993j70bvaxm643qhb8axwbq174c1"; depends=[digest R6 rappdirs]; }; - hockeystick = derive2 { name="hockeystick"; version="0.5.0"; sha256="0bqq5ml3v242lwy9ipc2cjddp9a28svy0qyhpjc1aqs06qx7yx1h"; depends=[dplyr ggplot2 lubridate patchwork rappdirs readr rvest scales tibble tidyr]; }; + hockeyR = derive2 { name="hockeyR"; version="0.1.0"; sha256="1h7y0025vfj4d07j9l2gsjayw2z447qfxgvck2vsr0bhsk9lcqzd"; depends=[dplyr glue httr janitor jsonlite lubridate polite purrr rvest stringr tidyr zoo]; }; + hockeystick = derive2 { name="hockeystick"; version="0.6.1"; sha256="17zf1i2qawmgxqvzgfj65c4gs037kn145l1i8f2ql36f417l471w"; depends=[dplyr ggplot2 lubridate patchwork readr rvest scales tibble tidyr]; }; holdem = derive2 { name="holdem"; version="1.2"; sha256="0mcb4civ4p7apm7kfl88apvb4yznsmn4hggfggmjhs046g6bi2p7"; depends=[]; }; + holland = derive2 { name="holland"; version="0.1.2-1"; sha256="0f5nr17rmx1m3g4aw6c1f82xdj2ll5nr8slm8ha80cg2i6a90v10"; depends=[MplusAutomation mvtnorm]; }; holodeck = derive2 { name="holodeck"; version="0.2.1"; sha256="1iazi5is41ap58vq56jgz88id0i6ppz55y9gx77a5navrrn0db4l"; depends=[assertthat dplyr MASS purrr rlang tibble]; }; homals = derive2 { name="homals"; version="1.0-9"; sha256="055hhpbypaw1cdkqvn4i43kbamsym4sk0jg4wlczln1x48smjwic"; depends=[ape scatterplot3d]; }; homeR = derive2 { name="homeR"; version="0.3.0"; sha256="0gi383392rs7snb2l9760vkws5hqfikyaj3i7cyby9g1sc2s6yx8"; depends=[]; }; @@ -10004,18 +10414,17 @@ in with self; { homtest = derive2 { name="homtest"; version="1.0-5"; sha256="1lnqlg3dwq174ic6dbjllysw5fjy5kvvgbl6gvabjmcs66z27fp0"; depends=[]; }; hopbyhop = derive2 { name="hopbyhop"; version="3.41"; sha256="1dh502mjrk9dlqikn0ak4gh2dw9nrnp3zrz8j1xwa9cjn37al2wh"; depends=[ggplot2 pastecs]; }; hopit = derive2 { name="hopit"; version="0.10.3"; sha256="1dhfsbf4j2acncw0ypg44lkphhznafd80880jxfl6jdhd9fg2nn8"; depends=[MASS Matrix Rcpp RcppEigen Rdpack survey]; }; - horizon = derive2 { name="horizon"; version="1.2"; sha256="0b8m9ghfabjgdl155wh4gc4ng2lsvyfyhsy62pldbcix757b4ck9"; depends=[raster]; }; hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; horserule = derive2 { name="horserule"; version="1.0.0"; sha256="0d348pn0ld7lr9lfl1z05905l9kl296j0xic1pib6r5l1c5600r9"; depends=[gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer Rdpack]; }; horseshoe = derive2 { name="horseshoe"; version="0.2.0"; sha256="1qhkw6agkhpmgf27429c3kqqhbvpg61l0dvfxg7n564y2ha76r3c"; depends=[]; }; horseshoenlm = derive2 { name="horseshoenlm"; version="0.0.6"; sha256="1m3n12wgmb1wnxc40bzpna261das8hy47l7hmvhfbzhmp7v803v5"; depends=[msm survival]; }; - hot_deck = derive2 { name="hot.deck"; version="1.1-2"; sha256="089sfkpl9m1xxpxxxa9kpc99lcswsz90dhq1k7iji2f7wby5i905"; depends=[mice]; }; + hot_deck = derive2 { name="hot.deck"; version="1.2"; sha256="1zdrbqkqh3sbc4pkrqgv230h6jm6fvf3wwpb3y6r9l3g8zh4j18r"; depends=[data_table MASS mice tidyr]; }; hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; hotspots = derive2 { name="hotspots"; version="1.0.3"; sha256="12v88k3yz1bsxx9p5dx8y54ccqcglwknm2jr7ybygdj2yasjr5l0"; depends=[ineq lattice]; }; housingData = derive2 { name="housingData"; version="0.3.0"; sha256="0ngfx2vjx705xixzpz0rgx1481cr2szj4yfi5g7ma1hhivddl7d1"; depends=[]; }; hover = derive2 { name="hover"; version="0.1.1"; sha256="09lpga8a87h6fyg0j3av4xjna300ifsx2ygzwsnvh2l1d70fwf8m"; depends=[htmltools shiny]; }; howmany = derive2 { name="howmany"; version="0.3-1"; sha256="045ck8qahfg2swbgyf7dpl32ryq1m4sbalhr7m5qdgpm62vz8h7f"; depends=[]; }; - hpa = derive2 { name="hpa"; version="1.1.3"; sha256="1dq7jvgr3i0k43fzy2bd16ld0k9ficm2ypkbzj25pii95nx0rr6n"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + hpa = derive2 { name="hpa"; version="1.2.1"; sha256="0z60j7ydbifwsp2flksgswnw3zrr0gamkng4nrbbsz7zxmagsxml"; depends=[Rcpp RcppArmadillo RcppParallel]; }; hpackedbubble = derive2 { name="hpackedbubble"; version="0.1.0"; sha256="1br7q4958f1zgvisglsaf41nz2ahnqi3bzazvlfnmk3nq03cb1ri"; depends=[htmlwidgets]; }; hpcwld = derive2 { name="hpcwld"; version="0.5"; sha256="17k4mw41gygwgvh7h78m0jgzh1bivrvrsr8lgxxw3sbkw88lwb40"; depends=[multicool partitions]; }; hpiR = derive2 { name="hpiR"; version="0.3.2"; sha256="0gz9ngnjgys7hzijsma2iyywwiv7vjar5gls28ds11wq8pmsv96n"; depends=[dplyr forecast ggplot2 gridExtra imputeTS lubridate magrittr MASS pdp plyr purrr ranger rlang robustbase zoo]; }; @@ -10025,7 +10434,8 @@ in with self; { hrIPW = derive2 { name="hrIPW"; version="0.1.3"; sha256="1ns0mxkcfs2jva4wsbqkybgasgyxvxlcfxayky6lrfhic8jxvmg4"; depends=[survival]; }; hrbrthemes = derive2 { name="hrbrthemes"; version="0.8.0"; sha256="057h60b5p53dcyjyfwlgjc1ry968s9s64dw78p443w8717zk7zpc"; depends=[extrafont gdtools ggplot2 htmltools knitr magrittr rmarkdown scales]; }; hrcomprisk = derive2 { name="hrcomprisk"; version="0.1.1"; sha256="0w0ij2yqgg6gkn3pdaism1xqw3dfnm670j2pmsd85qk1ybxzq9l5"; depends=[survival]; }; - hrt = derive2 { name="hrt"; version="1.0.0"; sha256="0pvxm2jqw6bamyjf827nawnfhj2ysy743qlx8fmdjdacmkj2va64"; depends=[CompQuadForm Rcpp RcppEigen]; }; + hrqglas = derive2 { name="hrqglas"; version="1.0.1"; sha256="1fmizzs7d42dziih5yaj449k1gw6fxraw72z9h1l2jz6qqgd8938"; depends=[MASS Matrix Rcpp]; }; + hrt = derive2 { name="hrt"; version="1.0.1"; sha256="0l0hjspncr6pkc3sg11p63k1gy1jmc70g6581ykh6zy0b07zm8rk"; depends=[CompQuadForm Rcpp RcppEigen]; }; hscovar = derive2 { name="hscovar"; version="0.4.2"; sha256="06bkqcp0vcnkp0jqi0qjvxnw0lk0w4mrf88h1769ak7r49vzlr6f"; depends=[foreach Matrix pwr rlist]; }; hsdar = derive2 { name="hsdar"; version="1.0.3"; sha256="1slb2m62j86hn1kvpv72fvp48sxl7zb2znrr70jqqbrah8n1ynnl"; depends=[Boruta caret raster rgdal signal]; }; hse = derive2 { name="hse"; version="0.0-28"; sha256="14w09wm1kk7b4q8cl5cwjfqvzm2fb4ls8qjw6i0l54184fmw4dah"; depends=[]; }; @@ -10034,32 +10444,34 @@ in with self; { hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.2"; sha256="1b62k9sc6604djy37anslvqjpbrj9wsc9mvnfbrnmhqf4g0nnpdq"; depends=[Rcpp RcppArmadillo snowfall]; }; hsrecombi = derive2 { name="hsrecombi"; version="0.3.4"; sha256="0ca6672px0y5cibv9hk4hc638rp4d3bhbw0qn81irwwk84yacspv"; depends=[curl data_table dplyr hsphase quadprog Rcpp rlist]; }; - hsstan = derive2 { name="hsstan"; version="0.8"; sha256="1milwygwn3djd5rv7x03wp6l02gdvaxnm4zhm56fwm64jbk5z3yg"; depends=[BH ggplot2 loo pROC Rcpp RcppEigen rstan rstantools StanHeaders]; }; + hsstan = derive2 { name="hsstan"; version="0.8.1"; sha256="0k7sqwx73zid68ji9l2hfihqdlk3rdpid81pp8g3fmi8dpvrzkms"; depends=[BH ggplot2 loo pROC Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; htestClust = derive2 { name="htestClust"; version="0.2.0"; sha256="1nwj74w5hyz929jz2qci12x1zpk9gva75gn68k70l6xc5vya60qn"; depends=[bootstrap MASS]; }; htm2txt = derive2 { name="htm2txt"; version="2.1.1"; sha256="09q026yy8qm1fb3a4bf9vsp4j09kayl7xmk0p58ikar5l3bmfdjv"; depends=[]; }; html2R = derive2 { name="html2R"; version="0.1.0"; sha256="1zdnwbqlpjh8r2xcl83da9pzh9cb8h908krnrs61vqhka7zb82ng"; depends=[glue shiny shinyAce shinyjqui shinythemes]; }; html5 = derive2 { name="html5"; version="0.1.0"; sha256="0ainfi0gb3ylg10j910z61j6qppfl6jh8399ng9wlpv8c7pjzs8l"; depends=[]; }; - htmlTable = derive2 { name="htmlTable"; version="2.1.0"; sha256="1gzh0bdxi55p1ckxv4k0a41b1j0grwv2w3lkqz4c3gkw66dk6ja0"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; }; - htmldf = derive2 { name="htmldf"; version="0.2.0"; sha256="0wrc68dgws28ypgns6c542mf5ghnz297d07855wqz7p60hdk8m55"; depends=[cld3 dplyr httr lubridate magrittr progress R_utils ranger rvest stringr tibble tidyr urltools xml2]; }; - htmltab = derive2 { name="htmltab"; version="0.8.1"; sha256="07hvsxgjbic835jp8ilz3aw9hwlc66byii8mrm4qqpqmfc4splzb"; depends=[httr XML]; }; + htmlTable = derive2 { name="htmlTable"; version="2.2.1"; sha256="05zy9acx4s80dr880q69i4rcjqgmbz18gn7pyazda9gsnm981j96"; depends=[checkmate htmltools htmlwidgets knitr magrittr rstudioapi stringr]; }; + htmldf = derive2 { name="htmldf"; version="0.4.0"; sha256="11xsrc5wxppyzi639jrqmd09js4mv8nrvn6zhnk5i06jirc0w0v7"; depends=[cld3 dplyr httr lubridate magrittr processx progress R_utils ranger rvest stringr tibble tidyr urltools xml2]; }; + htmltab = derive2 { name="htmltab"; version="0.8.2"; sha256="09hnf339f3hzll7a0shq615h9d6f6xqrcv0c9iid6575m5qsallf"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.5.0"; sha256="1djkjff3750fm1sp54kf9cjvsqz2x7ia1ns12h5vqqcvwzfd0701"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; - htmltools = derive2 { name="htmltools"; version="0.5.1.1"; sha256="1fm4cymz4hz6lds80m9j5q00xy5flkrmfn5dkrn3s3rkzqpyggzh"; depends=[base64enc digest rlang]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="1.5.3"; sha256="0a8g7wqd3qxnhwkm9c9bkzg29db7gvjiaa5y038ln8nch8qq7981"; depends=[htmltools jsonlite yaml]; }; + htmltools = derive2 { name="htmltools"; version="0.5.2"; sha256="1yv74ydyqm28gfhimmr7825sj1iaawpwsnzq05c2ma756q2dbivx"; depends=[base64enc digest fastmap rlang]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="1.5.4"; sha256="1hgz8sx8xrvfcdwa4q15k942w4qsqg8lyxbbf7qyfzbi807wcgqs"; depends=[htmltools jsonlite yaml]; }; htree = derive2 { name="htree"; version="2.0.0"; sha256="15bi5c2p4aghihp3k12s78447j2x9hbsaq56b5lc8jmd1vf0jdwb"; depends=[]; }; - hts = derive2 { name="hts"; version="6.0.1"; sha256="0bbg7p9iqi3azl7m2vh9ggfdi90c9hy31fm5p0w9ixmvvavwhny6"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; + hts = derive2 { name="hts"; version="6.0.2"; sha256="06mmxdm7a2fb1r4mb2x12b00rnkaxlrmlkv5yizr3yixmn4is9wb"; depends=[forecast Matrix Rcpp RcppEigen SparseM]; }; htsr = derive2 { name="htsr"; version="1.1.0"; sha256="0dndsdd8k5jfqgq1h9s58iw7ddqw09g9liyc06ahgykx8pfj9lcy"; depends=[DBI directlabels dplyr editData ggplot2 lubridate openair purrr raster RColorBrewer readr readxl RODBC RSQLite shiny stringr tibble WriteXLS zoo]; }; + httk = derive2 { name="httk"; version="2.0.4"; sha256="0akddji209hw82lcvd7k63k4lzcx3jazycw2p1388b36nzm40w79"; depends=[data_table deSolve magrittr msm mvtnorm purrr survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; httpcache = derive2 { name="httpcache"; version="1.2.0"; sha256="026sl19301al3sid9hlwq8jz5b0zvh9a4n3cl4niqvc2b57h133r"; depends=[digest httr]; }; httpcode = derive2 { name="httpcode"; version="0.3.0"; sha256="0xig0rvc81hg7mw0iq9s0an1nw24fg0kfs2p2n6dzhwl9w506fjr"; depends=[]; }; - httpgd = derive2 { name="httpgd"; version="1.1.1"; sha256="1mrnfh0f1crvk2pc1ihmykf75bibflmpjap6m3hc5iizn5w0qa3c"; depends=[BH cpp11 later systemfonts]; }; + httpgd = derive2 { name="httpgd"; version="1.2.1"; sha256="1zidky766b2vzvgdc7dhrsaang8a0ak3shysza2ai8q5khbw87by"; depends=[BH cpp11 later systemfonts]; }; httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; - httpproblems = derive2 { name="httpproblems"; version="1.0.0"; sha256="0dwxi3867hxafsr98vyqhn9aqmr2pl8qlqmwxdcmlmgdwwlhmrnb"; depends=[]; }; - httptest = derive2 { name="httptest"; version="4.0.0"; sha256="13mc75rrn3mhsa7h7sxicgkk36fjc341dwzif2jhpab3na6465hj"; depends=[curl digest httr jsonlite testthat]; }; - httpuv = derive2 { name="httpuv"; version="1.6.0"; sha256="01i0x9234fsyinzfjyl9a807kyvb0nivr6jx9911fp0msdmy1vkm"; depends=[later promises R6 Rcpp]; }; + httpproblems = derive2 { name="httpproblems"; version="1.0.1"; sha256="0zd683xd9f9hz6dxm4bmic54jqjcabr23kwl6afsmdjwnrwwsn06"; depends=[]; }; + httptest = derive2 { name="httptest"; version="4.1.0"; sha256="1k5z55f5l7khi142787ignf57rfhxzf442rzbhpr04182g906xfx"; depends=[curl digest httr jsonlite testthat]; }; + httpuv = derive2 { name="httpuv"; version="1.6.3"; sha256="0xh8y05k4jxdwp9xh4x478y3scnv80q05l9gxk2ni6f0dk43iqxz"; depends=[later promises R6 Rcpp]; }; httr = derive2 { name="httr"; version="1.4.2"; sha256="1y8y1g1dkgv9jafrk1kj6pzxpw95c0rr9lplblfq2byrs1pfsas6"; depends=[curl jsonlite mime openssl R6]; }; + httr2 = derive2 { name="httr2"; version="0.1.0"; sha256="10klgy0zw9lywmc3irivpbpqia67nagqimgcqpw3cyd48qz8q10p"; depends=[cli curl glue magrittr openssl R6 rappdirs rlang withr]; }; hues = derive2 { name="hues"; version="0.2.0"; sha256="062i7yc16nmnp15c1jh4xffw2lpklp36wkn1yvagh186ahnlgffx"; depends=[colorspace]; }; - huge = derive2 { name="huge"; version="1.3.4.1"; sha256="11m80dnaxqw5v006q6kvhndl2y5ih5553fcqg4jcaljd8sp9xvvq"; depends=[igraph MASS Matrix Rcpp RcppEigen]; }; + huge = derive2 { name="huge"; version="1.3.5"; sha256="1sl457a1lndrx98y2j9a2smanawx2iqlhl82iand0g3p5xp8ch4j"; depends=[igraph MASS Matrix Rcpp RcppEigen]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; humanize = derive2 { name="humanize"; version="0.2.0"; sha256="0hhhd640n77s8xaa2gbd9fckdk2yjg68gdb7wjy56a2khzqfssxr"; depends=[assertthat glue lubridate]; }; @@ -10068,50 +10480,55 @@ in with self; { hunspell = derive2 { name="hunspell"; version="3.0.1"; sha256="0ql6y05d4xxpm468rslb0wxdp1x9l3flxzmb5w6pjg617f8vpv8z"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.1.1"; sha256="0a8xy71dkq2bzdnc90irxmbcxhi0anh87ic22x7b22c3m5605w6s"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate mapproj maps purrr RColorBrewer rlang stringr tidyr]; }; - hutils = derive2 { name="hutils"; version="1.6.0"; sha256="17q9ndsb11k66y0c0sz0qq9nm9b4xl6ijjwlim7qbm6z69qv2krc"; depends=[data_table fastmatch magrittr]; }; - hutilscpp = derive2 { name="hutilscpp"; version="0.5.2"; sha256="1d25csrn9mrnvzdjamn7zrmsz8mc3qp8841n7kjrifdav42s4y32"; depends=[data_table glue hutils magrittr Rcpp]; }; - huxtable = derive2 { name="huxtable"; version="5.3.0"; sha256="1jar8z10jqzpcy7388vl0nmzb018r70x43smnk10wb6szhmbssw7"; depends=[assertthat commonmark generics glue memoise R6 rlang stringr tidyselect xml2]; }; + hutils = derive2 { name="hutils"; version="1.7.1"; sha256="118yf5p5j57i2chq6rzvipjryg1dslwp6ksn7rmhyqkmgald9hz9"; depends=[data_table fastmatch magrittr]; }; + hutilscpp = derive2 { name="hutilscpp"; version="0.8.1"; sha256="0pil26anvv2pv1s7kdbnzvr1r7fw65810nqwkknhhn6arm8fg0z4"; depends=[data_table glue hutils magrittr]; }; + huxtable = derive2 { name="huxtable"; version="5.4.0"; sha256="1bhz3pz0bbnwdqy4jriz3m1wzyrlkqyhfv5h5l90cap3m0mlx6b6"; depends=[assertthat commonmark generics glue memoise R6 rlang stringi stringr tidyselect xml2]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwordcloud = derive2 { name="hwordcloud"; version="0.1.0"; sha256="0civbwv276lcwvfs4qzz14r8rk14kg1ml4zzhi3msnkkh29v70y2"; depends=[colourpicker htmlwidgets shiny wordcloud2]; }; hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; + hwsdr = derive2 { name="hwsdr"; version="1.0"; sha256="0r9chbjkdvr6614kpps5250pdg5w2gxyf2a0rvxf3hgs5krgcm32"; depends=[httr raster sf]; }; hwwntest = derive2 { name="hwwntest"; version="1.3.1"; sha256="1mz5svx5vbisdl5wxdnwip13pq4slyigc7j52l526rr9n0l0pr5v"; depends=[polynom wavethresh]; }; hySpc_testthat = derive2 { name="hySpc.testthat"; version="0.2.1"; sha256="12za828sw2al3aa236ksmnwxpy2sqw8gl8b3p3vvrjk1l31l1qcm"; depends=[testthat]; }; hybridEnsemble = derive2 { name="hybridEnsemble"; version="1.0.0"; sha256="08y11cmlhnl456wxsvh3ll1f9ywkmgqjwlwr3v3qhm54nlanwvkr"; depends=[ada AUC e1071 FNN genalg GenSA glmnet kernelFactory NMOF nnet nnls pso quadprog randomForest reportr Rmalschains ROCR rotationForest rpart soma tabuSearch]; }; hybridModels = derive2 { name="hybridModels"; version="0.3.7"; sha256="0fj3dvv7s1hlicvlb077pkhbj894brzgdxhp67jck9zpy2qymzxq"; depends=[doParallel doRNG foreach ggplot2 GillespieSSA reshape2 stringr]; }; + hybridogram = derive2 { name="hybridogram"; version="0.3.2"; sha256="14p2gwmgcaf84aycdc2a51frw2pccrffsjk8n83gvj2ans8phrr9"; depends=[pheatmap]; }; hydra = derive2 { name="hydra"; version="0.1.0"; sha256="0r3r8cds4h15narawxhzkrvgnf00vlgrgqdgnmbzjyyb1dmry8wn"; depends=[]; }; - hydraulics = derive2 { name="hydraulics"; version="0.2.4"; sha256="0lfc3xavbcmqh7ran60hi9lkv1fyw6adn63dbdik5x5dmk729vl8"; depends=[ggplot2 reshape2 units]; }; + hydraulics = derive2 { name="hydraulics"; version="0.3.0"; sha256="1scwj9p2jmmhn1mvw1h8jfns2sdi85pzg6axr0i8qla2x33pl4g8"; depends=[ggplot2 reshape2 units]; }; hydroApps = derive2 { name="hydroApps"; version="0.1-1"; sha256="1ycv7l2ywwnx2mgklg6rry7n24jyhi4spvp1xl345yvyn9kf15dz"; depends=[nsRFA]; }; + hydroEvents = derive2 { name="hydroEvents"; version="0.10"; sha256="1w7nswdmg52ldzzz4gphqnp5gfgh9pvgyq9w0phpzj5ff19bxbxz"; depends=[]; }; hydroGOF = derive2 { name="hydroGOF"; version="0.4-0"; sha256="0fw8b66k7gdkdjxgmdpp3lk9d8p0wmlvhq2rkcvajjb5wd09f43a"; depends=[hydroTSM xts zoo]; }; hydroPSO = derive2 { name="hydroPSO"; version="0.5-1"; sha256="16gdv19yqla80s9fjmvahfn21jv62zivirzs5ch4zm9db54g6bry"; depends=[data_table Hmisc hydroGOF hydroTSM lattice lhs scatterplot3d sp vioplot zoo]; }; hydroTSM = derive2 { name="hydroTSM"; version="0.6-0"; sha256="1msavd2k05apsky88zkk1l3c6y3v95fwhmr6xmwsap70bj25krsv"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydroToolkit = derive2 { name="hydroToolkit"; version="0.1.0"; sha256="0bij4365hczvq17wj9hp0570v35m8ili11mp9dzfj3mvhhqrc9p4"; depends=[ggplot2 lubridate plotly readxl reshape2]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; - hydroscoper = derive2 { name="hydroscoper"; version="1.4"; sha256="1ldbss5bnhhqlpkikk1i2vm0imiiqrn53xmfhd0sgx2ld7b54s1v"; depends=[jsonlite pingr readr stringi stringr tibble]; }; - hydrostats = derive2 { name="hydrostats"; version="0.2.7"; sha256="16xrl94289kk1fb6pj0j8q8b40rmsm86fz2msmrmxh7mdp6hmxx9"; depends=[]; }; + hydroscoper = derive2 { name="hydroscoper"; version="1.4.1"; sha256="0jhvjmhcprjdjg6a54ic2f4kxfanpgwzzrkyyiggmj5jjg9yfhfw"; depends=[jsonlite pingr readr stringi stringr tibble]; }; + hydrostats = derive2 { name="hydrostats"; version="0.2.8"; sha256="1li66w7ak8hmvnmmb4q7nswd4zdd047mbrk4chd1bdya7dhhk644"; depends=[]; }; + hydrotoolbox = derive2 { name="hydrotoolbox"; version="1.0.1"; sha256="0n2qfw1060szqllvc8vhhv8yy69dhs6m6hh5rnymfhm2wg8994a3"; depends=[ggplot2 lubridate magrittr plotly Rcpp readxl reshape2]; }; hyfo = derive2 { name="hyfo"; version="1.4.3"; sha256="012akh96qwafhgjba1gjwy0r14a6shcsk5b7n1hvw230s07zxd8r"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.1.1"; sha256="1xibiydfkhzsw0yqfc0xfzj4yz8xyxqlvnfpyxg33v5fwp9wap3v"; depends=[LaplacesDemon magicaxis MASS rgl]; }; hyper2 = derive2 { name="hyper2"; version="2.0-0"; sha256="03mgz3b9idwm7m4c2zzyqin8p85pp3yhmaxsxsbkx5li2p66fhwn"; depends=[cubature EMC magrittr mathjaxr partitions Rcpp]; }; hyperSMURF = derive2 { name="hyperSMURF"; version="2.0"; sha256="1aczsph6ax5xfd5rfvsd9bmgaq3j2f5f82fx8whrgbin0hxz19d8"; depends=[randomForest unbalanced]; }; - hyperSpec = derive2 { name="hyperSpec"; version="0.99-20201127"; sha256="1mflkygqz2x63d7bwiyfkdc1bndz73bfzmbdjh2fg8x15kbpm2r6"; depends=[dplyr ggplot2 lattice latticeExtra lazyeval testthat xml2]; }; + hyperSpec = derive2 { name="hyperSpec"; version="0.100.0"; sha256="0m0ws6lm5q1555n0qhixj4fqq4bbcf7i7d73pg85z74a3058gk5s"; depends=[dplyr ggplot2 lattice latticeExtra lazyeval testthat xml2]; }; hypercube = derive2 { name="hypercube"; version="0.2.1"; sha256="0m0n64rl5fnhvhfdknrza8a0h5lw8vbgakaqbyfx77ixhwqhjn1l"; depends=[dplyr plotly stringr]; }; hypergate = derive2 { name="hypergate"; version="0.8.3"; sha256="0h36wi4bdxinv7p9alyb7jv1902vdanxx7yvyaw2dcqkdjlzzj49"; depends=[]; }; hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; }; - hyperoverlap = derive2 { name="hyperoverlap"; version="1.0"; sha256="0ak7z4dxdbh85mliqbykiiv6j31skmrxy0xirdn19gsgkfcws90f"; depends=[e1071 ggplot2 MASS matlib misc3d rgl]; }; + hyperoverlap = derive2 { name="hyperoverlap"; version="1.1.1"; sha256="10kcphn5zl1pl70xg9bn947i9mbnjxk03p6y7xhdlv152cihffw0"; depends=[e1071 ggplot2 MASS matlib misc3d rgl]; }; hypersampleplan = derive2 { name="hypersampleplan"; version="0.1.1"; sha256="1sk3s1jm46ac4i7p433s3kyngj86kq2821zzhp30a3y8vi1j2psq"; depends=[]; }; hypervolume = derive2 { name="hypervolume"; version="2.0.12"; sha256="0jd49jncmg23vm9rkcy6sd4zjwlw75hwps7wahpb36zs9kb63ssq"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; + hypoRF = derive2 { name="hypoRF"; version="1.0.0"; sha256="1yyq1pjxm9p395wq4zfimvcagspl8vlk0kzpa92pr084q5f7jcyr"; depends=[ranger]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; - hypr = derive2 { name="hypr"; version="0.1.11"; sha256="1bhdxnj1h2whq33hw3cxdi4bhrhx48nifqfbcyaqimr8ips4hpwr"; depends=[MASS pracma]; }; + hypr = derive2 { name="hypr"; version="0.2.2"; sha256="1bmg8pz57qxyyicfsyv3s2mk9y914jsids4glsm640kvpy9a59q6"; depends=[cli magrittr MASS pracma]; }; hystReet = derive2 { name="hystReet"; version="0.0.2"; sha256="01nrbk48r1hf1yc953yf1pzryzrjjckwdqhb3pbnwfza8q0aqsfq"; depends=[httr jsonlite lubridate]; }; - hysteresis = derive2 { name="hysteresis"; version="2.6"; sha256="00v19m52bg2i3zg8p7yj56axzj9sm64qr61226p5h7sn0zrpws3b"; depends=[car MASS msm]; }; + hysteresis = derive2 { name="hysteresis"; version="2.7"; sha256="1nnfr50nafhimj2j5xpxly3i8xvkwwddz864gklwm9jzdpmv02yh"; depends=[car MASS msm]; }; hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; i2dash = derive2 { name="i2dash"; version="0.2.3"; sha256="0pj4s47nbs67jnnk0dsna59lrn983zzkybbf6hf4s77sikshmwf0"; depends=[assertive_sets assertive_types flexdashboard glue htmltools knitr magrittr rmarkdown stringi stringr xfun ymlthis]; }; - i2extras = derive2 { name="i2extras"; version="0.1.0"; sha256="0n3s3iwc7rgnwx3ajki3kdcgq97xyx5q6fkvvhzy37z5nhnpb1a0"; depends=[data_table dplyr ellipsis ggplot2 incidence2 rlang tibble tidyr tidyselect trending vctrs]; }; + i2extras = derive2 { name="i2extras"; version="0.1.2"; sha256="0h9hy9qbw2lk0pxhrn2gygmcx731r38pj08iyfci5axp8fs0cizs"; depends=[data_table dplyr ellipsis ggplot2 incidence2 rlang tibble tidyr tidyselect trending vctrs]; }; iAR = derive2 { name="iAR"; version="0.1.0"; sha256="1ry81qapffry81531l51mbmarvbx6d349s0w49lqlz0vh31hicgw"; depends=[ggplot2 Rdpack]; }; - iAdapt = derive2 { name="iAdapt"; version="2.0.0"; sha256="1c49dc6hny034fgkdpvry99mz4z2n2daih32sh5jmk2xpqk1zzmw"; depends=[Matrix shiny shinydashboard]; }; + iAdapt = derive2 { name="iAdapt"; version="2.0.1"; sha256="050kzacvf19m8s89layqqf0l85db1k4cd3akb16jrv9wjfi9k61v"; depends=[Matrix shiny shinydashboard]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3.1"; sha256="0xq4q4kc2f0whrxz1vmi2gca9pxqix2qm4sfkwbch85if2k8l8fj"; depends=[msm Rcpp RcppArmadillo]; }; iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; - iBreakDown = derive2 { name="iBreakDown"; version="1.3.1"; sha256="1bfl5bh0x6z5a0cmdmx68sap9zdxa3kwdnyk57csxapc362yz108"; depends=[ggplot2]; }; + iBreakDown = derive2 { name="iBreakDown"; version="2.0.1"; sha256="00jzrndb3ahsv6ihp2pvs732n9cc944m83vdinrl9v1pxd82prkh"; depends=[ggplot2]; }; iC10 = derive2 { name="iC10"; version="1.5"; sha256="1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl"; depends=[iC10TrainingData impute pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; iCAMP = derive2 { name="iCAMP"; version="1.3.4"; sha256="0hzl18irvndnka8vkza0f9sspfj4708dmzsdvbnv7mz4s41vqn11"; depends=[ape bigmemory Hmisc minpack_lm nortest permute vegan]; }; @@ -10122,25 +10539,27 @@ in with self; { iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; iDINGO = derive2 { name="iDINGO"; version="1.0.4"; sha256="00x9q73y2a1bxnbqv18sjp7nrbj1bk56rzhmllpnllwy8k9dw31j"; depends=[GGMridge glasso igraph mvtnorm scales visNetwork]; }; iDOS = derive2 { name="iDOS"; version="1.0.0"; sha256="1jj98ikzvfp6qbnh2j6msi0m89sbmjjafgry43rq7qmczzs81hl8"; depends=[VennDiagram]; }; + iDOVE = derive2 { name="iDOVE"; version="1.3"; sha256="10xxg2mldbcjd6n1l2kblm7agw93ckx6waqwq9dm00l88kf06l3f"; depends=[knitr Rcpp RcppArmadillo]; }; iDynoR = derive2 { name="iDynoR"; version="1.0"; sha256="01702vl10191mbq2wby1m0y6h8i6y6ic4pa83d27cg3yccsrhziz"; depends=[vegan XML]; }; iFad = derive2 { name="iFad"; version="3.0"; sha256="0jrl9bayihp3wb4k5w9kc71qlsdxk7vl83ydfibx2bg79c4hf3cs"; depends=[coda MASS Rlab ROCR]; }; - iForecast = derive2 { name="iForecast"; version="1.0.2"; sha256="1rnqi16flm6c5ibsgydz3zqb1738fw2f6wbf5a5ymgf3dsarr2v4"; depends=[caret magrittr zoo]; }; + iForecast = derive2 { name="iForecast"; version="1.0.3"; sha256="1mvgg96rd8clqhdg1n2a6vcx3y1rp64n5zlj1nrnpd6c938a0a1m"; depends=[caret magrittr zoo]; }; iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; }; iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; iGraphMatch = derive2 { name="iGraphMatch"; version="1.0.1"; sha256="0jpwml540k5wwn958vb6ni3pldpx675y9jm8pr6vp2s571mlz7cv"; depends=[clue igraph irlba Matrix Rcpp]; }; iIneq = derive2 { name="iIneq"; version="1.0.2"; sha256="15487majkslabw33dgqfx0jmbzzjhiy8z07bki5540d1wf6rmmnn"; depends=[doParallel foreach]; }; - iMRMC = derive2 { name="iMRMC"; version="1.2.2"; sha256="12ljry3gqzqjk72ndc557pn6jz3c23y5hcjlphw4kggrz7wb7b91"; depends=[]; }; + iMRMC = derive2 { name="iMRMC"; version="1.2.3"; sha256="1qga4mm5vslfmxcm3p99nijr4573kq71pfb6yd2ayl6lgjf3y0c3"; depends=[]; }; iMediate = derive2 { name="iMediate"; version="0.5.5"; sha256="1lwhrzm4g2fcazh782g7p11v5pyx165ig1dzgkmdmjffpwk0w8b4"; depends=[MBESS mvtnorm plotly]; }; iNEXT = derive2 { name="iNEXT"; version="2.0.20"; sha256="14bagsb0ja3j53i0g4a2ax2gj7lyc6sjcc7isdjx94clbnc2zcsg"; depends=[ggplot2 reshape2]; }; iNZightMR = derive2 { name="iNZightMR"; version="2.2.5"; sha256="1zxvlz0wyf4n2kpyk82grlww71agvfqp3apswbrimpvi13c9nzhl"; depends=[]; }; - iNZightPlots = derive2 { name="iNZightPlots"; version="2.12.6"; sha256="1qfs5h17p0zmzaj67dx197lqxyi670wfin5vm31v13jabwwsazgy"; depends=[boot chron colorspace dichromat hexbin iNZightMR iNZightTools lubridate magrittr quantreg rlang s20x scales survey]; }; - iNZightRegression = derive2 { name="iNZightRegression"; version="1.3.0"; sha256="0q4w935ckqciw46vvqqwn50bq30qgzq8g4pag8zf00vs4v4rzmxm"; depends=[car dplyr ggplot2 ggrepel ggtext iNZightPlots iNZightTools magrittr multcomp patchwork]; }; - iNZightTS = derive2 { name="iNZightTS"; version="1.5.7"; sha256="0x11ar2smm3am55k0pzxdx8q64l7vfbm6bbp4zs9q64q7069yrr1"; depends=[colorspace dplyr egg forcats ggplot2 ggtext glue gridExtra magrittr patchwork rlang tidyr]; }; - iNZightTools = derive2 { name="iNZightTools"; version="1.11.0"; sha256="01aa623brgdip2gp4kga9c9mg7qfyn1mvhs9g6c75xv9c1xg8jcg"; depends=[chron dplyr forcats glue haven lubridate magrittr RcppTOML readr readxl srvyr stringr styler survey tibble tidyr validate zoo]; }; + iNZightPlots = derive2 { name="iNZightPlots"; version="2.13.3"; sha256="0dj39qwcxr9pbqpkq40m4758014rwd5hi219slnjcwl6pikf6ndm"; depends=[boot chron colorspace dichromat hexbin hms iNZightMR iNZightTools lubridate magrittr quantreg rlang s20x scales survey]; }; + iNZightRegression = derive2 { name="iNZightRegression"; version="1.3.1"; sha256="0vqk4574xm7xwdg1vmlc4alhfby02ifvrkc1q3vabs7zxix0xn35"; depends=[car dplyr ggplot2 ggrepel ggtext iNZightPlots multcomp patchwork]; }; + iNZightTS = derive2 { name="iNZightTS"; version="1.5.8"; sha256="0nqjxjphd9lrwkj8qs05qk8sf70kyi6akvcpp9f5shb043csnbqr"; depends=[colorspace dplyr forcats ggplot2 ggtext glue gridExtra magrittr patchwork rlang tidyr]; }; + iNZightTools = derive2 { name="iNZightTools"; version="1.12.0"; sha256="17h2162pgka5y314drm2im6f5v39w9nv1k2klxjmajds9nn4cpsr"; depends=[chron dplyr forcats glue haven lubridate magrittr RcppTOML readr readxl srvyr stringr styler survey tibble tidyr validate zoo]; }; iRF = derive2 { name="iRF"; version="2.0.0"; sha256="1ll4lxg743p2zipxcq13yjsc7j7dk766dcyixwxilllbisg0dh8y"; depends=[AUC data_table doParallel dplyr foreach Matrix RColorBrewer Rcpp]; }; iRafNet = derive2 { name="iRafNet"; version="1.1-1"; sha256="0w9bry49apkrrrabglnv5w9l47jakmc30jh8q22a8gazwss293fb"; depends=[ROCR]; }; iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.1"; sha256="1sqg1n83m1308v6bk8ilra8w01frqyd8vpvmv63rllxz38r3vyhz"; depends=[]; }; + iRoCoDe = derive2 { name="iRoCoDe"; version="1.0.0"; sha256="1ikvaygwm4w7zfghdn8r0zlrv22z17kp8mcgykdwrrdv50pdypxh"; depends=[]; }; iSDM = derive2 { name="iSDM"; version="1.0"; sha256="1hzs187mwv3k2wx6dpvkizjhkcx63mznd06wiw6047lf5jrlif0a"; depends=[ade4 colorRamps geometry geosphere maptools MASS pdist raster rgdal rgl sp virtualspecies]; }; iSTATS = derive2 { name="iSTATS"; version="1.5"; sha256="14pd3k8w8hh7gl2iskax2pck6z96hdfrws5l69zdw02867bny404"; depends=[Cairo data_table ggplot2 gtools plotly rstudioapi shiny shinyBS shinyWidgets]; }; iSubGen = derive2 { name="iSubGen"; version="1.0.1"; sha256="0kfrgh4399x71mwa5j36nfszd65ybp61fwpc7qj3j9ypmgidwbaj"; depends=[cluster ConsensusClusterPlus keras philentropy tensorflow]; }; @@ -10148,16 +10567,16 @@ in with self; { iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; iZID = derive2 { name="iZID"; version="0.0.1"; sha256="1jaqdh6i5xyfw4y2wd9qivzjklf4j2xxnya8ssn7rv5bz6misgcz"; depends=[doParallel extraDistr foreach rootSolve]; }; - iadf = derive2 { name="iadf"; version="0.1.1"; sha256="0ys8rd05s0j6cs7snmp1car7lp7k4awvs8gnlqaw9zcd7w7k9r06"; depends=[dplR dplyr manipulate rlang tibble tidyr tidyselect]; }; - iai = derive2 { name="iai"; version="1.5.0"; sha256="17m5pvp352klv5kip8gk1f5flanlvxlpi7hrn4kcrhzb1gd3amsb"; depends=[JuliaCall lifecycle rappdirs rlang stringr]; }; + iadf = derive2 { name="iadf"; version="0.1.2"; sha256="18r9qyhicbfrkpqnxnn5i854s0afq4pnbaw2ckw1qrhy3pzys6zp"; depends=[dplR dplyr manipulate rlang tibble tidyr tidyselect]; }; + iai = derive2 { name="iai"; version="1.6.0"; sha256="1kx968cfz385bhm02hcs3bj3qqkw3kv3a5vigqqzlpa7073b5q75"; depends=[cowplot ggplot2 JuliaCall lifecycle rappdirs rlang stringr]; }; ialiquor = derive2 { name="ialiquor"; version="0.1.0"; sha256="0nrp75lzb49lhkxspvaq6wx5c48ny6fq9m3r1bz0v5f2fd5ilrdx"; depends=[]; }; iarm = derive2 { name="iarm"; version="0.4.2"; sha256="0scf1ad87sn4s7ki6hpgk4isy1k3qkdvs18bkwdflsarcx437ms2"; depends=[eRm ggplot2 gridExtra Hmisc PP psychotools vcdExtra]; }; ib = derive2 { name="ib"; version="0.1.0"; sha256="1rzgpgmg7bzg60dyxmmprcsri5wdbarqgp4ya5h418hnnmh8hg0n"; depends=[lme4 MASS Matrix Rdpack VGAM]; }; - ibawds = derive2 { name="ibawds"; version="0.1.2"; sha256="1pddzdgm5701rwvd628gcm0yn0qg0p9zhahjkcjwcdidkdh73xa3"; depends=[dslabs ggplot2 magrittr stringr]; }; + ibawds = derive2 { name="ibawds"; version="0.2.0"; sha256="1ys1qfzfwxki0k8m35zx1zr538la3afn7iwqbqdc61vx3f7dp0zc"; depends=[dplyr dslabs Ecdat ggplot2 kableExtra magrittr scales stringr]; }; ibb = derive2 { name="ibb"; version="0.0.2"; sha256="11rfrf0ap97rsq0yy23sjahp1bin3j31zdd61p8b5mbp0s0k7ci4"; depends=[dplyr httr jsonlite magrittr rlang tibble tidyselect]; }; ibd = derive2 { name="ibd"; version="1.5"; sha256="0rxvy4hn4fpbv6y214ggkmgfvzwns5mkanp4h8201rjk3v84mk2r"; depends=[car emmeans lpSolve multcomp]; }; - ibdreg = derive2 { name="ibdreg"; version="0.3.1"; sha256="0kgx9iavgm6d6njhki7bm82d6lw2c7kcch2pryd339js2hm0l5gq"; depends=[]; }; - ibdsim2 = derive2 { name="ibdsim2"; version="1.3.0"; sha256="00i2aakrs5rjp1vjlrg9khjfj9haw07v4yi54m49nkmvnjfyfixg"; depends=[ggplot2 glue pedtools Rcpp ribd]; }; + ibdreg = derive2 { name="ibdreg"; version="0.3.6"; sha256="1x8z0vr2cmdks12hxfm0wwxskb0cr669w5j5rpa2ln8q704yy41g"; depends=[]; }; + ibdsim2 = derive2 { name="ibdsim2"; version="1.4.0"; sha256="007q9s897j2chh89qimd7nprpikmswwyk2anyq1ix39dfbg92147"; depends=[ggplot2 glue pedtools Rcpp ribd]; }; ibeemd = derive2 { name="ibeemd"; version="1.0.1"; sha256="115z13q02gzixziknix2l53mi12zzg30ra9h35pv6qzrr11ra1ic"; depends=[deldir fields rgeos sp spdep]; }; ibelief = derive2 { name="ibelief"; version="1.3.1"; sha256="0fl2vvyl2qygppcycbnjkmlvq6rmxq18y1hk512d6szgi0czvpls"; depends=[]; }; ibm = derive2 { name="ibm"; version="0.1.0"; sha256="0g6wg2qpa4q142xw2vq5pca4ll6pb8hyll5g0c93kk8crddk51s7"; depends=[Rcpp]; }; @@ -10173,25 +10592,29 @@ in with self; { ica = derive2 { name="ica"; version="1.0-2"; sha256="0ya1nph1zwhad0bfz4yxs27kl45yk1dhnphdlrq34p8pqrpmj8g7"; depends=[]; }; ical = derive2 { name="ical"; version="0.1.6"; sha256="1raanaagas1c8w66d8s045z5ip1i97xca4233d55jk6cazv0mb1w"; depends=[V8]; }; icapca = derive2 { name="icapca"; version="1.1"; sha256="131gdrk8vsbac0krmsryvsp21bn9hzxqxq847zn16cxjf6y5i3xb"; depends=[]; }; + icardaFIGSr = derive2 { name="icardaFIGSr"; version="1.0.1"; sha256="1jmqhzc1nkbw3r9p4skh4pcp6986fa09h5bcyx99892gwn9dh7g0"; depends=[caret doParallel dplyr foreach ggplot2 gWidgets2 gWidgets2RGtk2 httr leaflet magrittr plotROC plyr raster reshape2 RGtk2 sp]; }; icarus = derive2 { name="icarus"; version="0.3.1"; sha256="0ipbhzvwdn1cnzgdw33cwv901768srxfi588bimjx2ssl80mqn3a"; depends=[]; }; + iccCounts = derive2 { name="iccCounts"; version="1.0.3"; sha256="0wcfdizj4ng7qr3yrjs356qq7xxbiqsf4s6fq4h54bnyvlj611jz"; depends=[Deriv dplyr ggplot2 glmmTMB gridExtra VGAM]; }; iccbeta = derive2 { name="iccbeta"; version="1.2.0"; sha256="03ms1c8qpbgxabj3hh4n0gwcazw6cd0cvixck5rz8fkvj04xzjak"; depends=[lme4 Rcpp RcppArmadillo]; }; iccde = derive2 { name="iccde"; version="0.3.2"; sha256="0r7g2ydj3yigm2n3qprj65ydrk0lacba7qnig6l6s14zi4bg9xna"; depends=[]; }; icd_data = derive2 { name="icd.data"; version="1.0"; sha256="0cynr9327wfg88661w4hali48mb6ghyvlqgybsa38k9bbf57v8aa"; depends=[]; }; icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; icdpicr = derive2 { name="icdpicr"; version="1.0.0"; sha256="0vfiw4f3mdh84b485hqvhjxx1bq15ankpzs2gwa3s93q1ykb8c3j"; depends=[stringr]; }; + icecream = derive2 { name="icecream"; version="0.1.1"; sha256="0dj3vza8lxjzgzwj3agb3kg7ijnayvh31725nkjjyf9iahm9aisj"; depends=[cli glue rlang]; }; icenReg = derive2 { name="icenReg"; version="2.0.15"; sha256="1cjlvj4i5bir5769a22w8bb9477h04d8rpxk9ks72jp6zjjkq5qa"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.2"; sha256="1zzv80jnn8ilnc1gv4nj24l2fl8805rjhqjgkb0xx4y9zhpg1jkp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; - icensmis = derive2 { name="icensmis"; version="1.4.0"; sha256="1rfsciac7lj6649a0lrmipjnhdlz615bd9hsvcy8mis0yv8k5y93"; depends=[Rcpp]; }; + icensmis = derive2 { name="icensmis"; version="1.5.0"; sha256="1afpn07a25j2jh89r78bvarg2kr0sk3ap8gdmvk75lc6g3dhvri9"; depends=[Rcpp]; }; icesAdvice = derive2 { name="icesAdvice"; version="2.0-0"; sha256="0sx93fsx2srmynnvs3bjb525m9a5w70qr9lghmkqa07crd991vfr"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.3-0"; sha256="0yaqlximxa3rcjxgrd0mii02mm9gpcxgw3i8pymp00bk8zixvj30"; depends=[]; }; icesTAF = derive2 { name="icesTAF"; version="3.6.0"; sha256="1g2qlpbi94731vvzdnc16f1gpgn49sxzlsljzzapfgk14dcm96b1"; depends=[glue jsonlite lattice purrr roxygen2]; }; icesVocab = derive2 { name="icesVocab"; version="1.1.9"; sha256="14zbc31xb7lizz1ki85nxb6lzmwjdyfajv0j43hmbbh3yscjd9p3"; depends=[xml2]; }; - icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; + ichimoku = derive2 { name="ichimoku"; version="1.2.1"; sha256="0xsfzlvxcnfz3cmbvzyiwdmkksc86qj6c547mdx9zxa0ycf9jig8"; depends=[cpp11 curl ggplot2 gtable jsonlite xts zoo]; }; + icmm = derive2 { name="icmm"; version="1.2"; sha256="179q8w60g4yrv6wqgfmg47by1zc1mbhsdjgl7jq4wirqvwnxvgym"; depends=[EbayesThresh]; }; iconr = derive2 { name="iconr"; version="0.1.0"; sha256="17q7zj92yrj49slmrpwkxkjd0imrl9ildms9zj8qx7yc7dcv4c1s"; depends=[igraph magick rgdal]; }; icosa = derive2 { name="icosa"; version="0.10.1"; sha256="025bqlgx4p1kxpmizfzgiamcq2f5nj5m2ky25fpgdm714sybvwvi"; depends=[igraph Rcpp sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.5.0"; sha256="024lda7619j8nxcj0d0myaqjsmyl9mqdyghd6imr29jxa2qhcm8y"; depends=[httr purrr rvest]; }; icr = derive2 { name="icr"; version="0.6.2"; sha256="1xqvzn02x13d706irv83zycpxhm8yq1c34rh1nphddy5gri7gwjb"; depends=[Rcpp]; }; - icrf = derive2 { name="icrf"; version="1.0.0"; sha256="1qz4wv23hspbrfzrj80qmhi0759zh3gn23rnns18j3020f506jdd"; depends=[Icens]; }; + icrf = derive2 { name="icrf"; version="2.0.0"; sha256="0kx687q0fv5agjwfsqx12wbayrzr02x316gg3y0rklqyq5aapvfv"; depends=[]; }; icsw = derive2 { name="icsw"; version="1.0.0"; sha256="0g7bcqs0rpbs1p202i9wjbl8hhy3r196zambm044xyf7kvsbzzf6"; depends=[]; }; idar = derive2 { name="idar"; version="1.2"; sha256="0bsh0dx44fi2ggf33xin94fh2yjkr0bbib68cy7k5c9z363zwhfc"; depends=[ape FD picante spatstat spatstat_core spatstat_geom]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; @@ -10203,7 +10626,7 @@ in with self; { identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ideq = derive2 { name="ideq"; version="0.1.4"; sha256="06xk9ghvh3fb79lbkmbqsk07xj06qaigiw41rzbi3bji3fjq1prw"; depends=[matrixcalc mvtnorm pdist Rcpp RcppArmadillo rgen]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; - idiogramFISH = derive2 { name="idiogramFISH"; version="2.0.4"; sha256="1ydm5cm99f6ymg78lmi56d8va6i5szmhczfj773aiwlxi3624n3z"; depends=[crayon dplyr plyr tidyr]; }; + idiogramFISH = derive2 { name="idiogramFISH"; version="2.0.5"; sha256="0wh0lvm8invfg0xk554pvwc1vn1v7qzhrmf7dmpygaifxqd13wdd"; depends=[crayon dplyr plyr tidyr]; }; idm = derive2 { name="idm"; version="1.8.2"; sha256="04f0i0kwdxywmj2i184knx5a5v9svx0lbam6wpz49hghg7qpy0w5"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idmTPreg = derive2 { name="idmTPreg"; version="1.1"; sha256="1329sjb4dnw3yiyg16whbj4l2v0kg8phg1x4ysvyp2kqkmw14yq6"; depends=[doParallel foreach survival]; }; idmodelr = derive2 { name="idmodelr"; version="0.3.2"; sha256="02hvlmk38rs0iavwz0qa3ryvyw1ixhjf9bksmadlhxl5pd18016j"; depends=[deSolve dplyr furrr future ggplot2 magrittr purrr rlang stringr tibble tidyr viridis]; }; @@ -10217,21 +10640,22 @@ in with self; { iemisctext = derive2 { name="iemisctext"; version="0.9.99"; sha256="02rr7sjjbrvfxwjl87f2ki245a8cw5fvx7z2z4rl8ixxlyxj9p5v"; depends=[]; }; ifa = derive2 { name="ifa"; version="7.0"; sha256="1cxafd7iwvyidzy27lyk1b9m27vk785ipj9ydkyx9z1v0zna2wnl"; depends=[mvtnorm]; }; ifaTools = derive2 { name="ifaTools"; version="0.22"; sha256="16wgq7b4xffgrmy10f58kwqd3m3p3lwa4ck92jb6gb8gml1n9g82"; depends=[ggplot2 OpenMx reshape2 rpf shiny]; }; - ifctools = derive2 { name="ifctools"; version="0.3.2"; sha256="18g0l0vh9z4nvl6jil32983c4z1dvawrivi4kz4g562q3habm279"; depends=[]; }; + ifctools = derive2 { name="ifctools"; version="0.3.4"; sha256="1cxxk1ysb5ya81g669xyalzmkpfjsjsrrqmvnsg1z0kwh5yv54ds"; depends=[]; }; ifs = derive2 { name="ifs"; version="0.1.5"; sha256="03g9cgs0zp89b1d7rpcn5clkvmg0spnariwrifd8hha476ldvfcy"; depends=[]; }; ifultools = derive2 { name="ifultools"; version="2.0-22"; sha256="0f95vqc47dgssqngznk0rclr72ndbyxc7gdq2cmbksvq7qpn3gg1"; depends=[MASS splus2R]; }; ig_vancouver_2014_topcolour = derive2 { name="ig.vancouver.2014.topcolour"; version="0.1.2.0"; sha256="0yclvm6xppf4w1qf25nf82hg1pliah68z7h3f683svv0j62q748h"; depends=[]; }; igate = derive2 { name="igate"; version="0.3.3"; sha256="0b8dk976z0764cmxwcq6w2f3akv7iivivharinq029p90b600qza"; depends=[dplyr ggplot2 kableExtra knitr rmarkdown stringr xtable]; }; - iglu = derive2 { name="iglu"; version="2.1.0"; sha256="1fzc1siafppgfhkfgpkb510w75sdas7395jiy76bwshwpbqlk8kx"; depends=[caTools dplyr ggplot2 gridExtra hms lubridate magrittr patchwork scales shiny tibble tidyr]; }; - igoR = derive2 { name="igoR"; version="0.1.1"; sha256="1wlwhclcyzzh8pnb512l3f95hbi3gzykz4p7ahrfsvrvhhd1904p"; depends=[]; }; + iglu = derive2 { name="iglu"; version="3.1.0"; sha256="1jq5y18gjxxvb1bhszs0xpklg7m9l9ig6ad1vjpll4m0xcln4hnl"; depends=[caTools dplyr ggplot2 ggpubr gridExtra gtable hms lubridate magrittr patchwork plotly scales shiny tibble tidyr zoo]; }; + igoR = derive2 { name="igoR"; version="0.1.2"; sha256="1nmci9falm9g15zd5vxx4v53i5xy6ndialr2s8xqwhcfkx1bk9nq"; depends=[]; }; igraph = derive2 { name="igraph"; version="1.2.6"; sha256="0vf7wrx77cdiav8724cw8gchrn0y9wvywphf5km4pa7xcqhsf3b4"; depends=[magrittr Matrix pkgconfig]; }; igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; }; igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; iheatmapr = derive2 { name="iheatmapr"; version="0.5.1"; sha256="1pwkwh7ljlpr6zyz6j8knpz3iw60xzkw8amc98x4pc2mw148jvzx"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr RColorBrewer scales]; }; + iheiddown = derive2 { name="iheiddown"; version="0.8.2"; sha256="0bb17872iiv6nnnc32r4g3pbgi5wlh1ishc66m454pav40mmsk9p"; depends=[bookdown covr crayon dplyr ggplot2 magrittr readr rlang rmarkdown roxygen2 rstudioapi servr tibble tidytext xaringan]; }; ihpdr = derive2 { name="ihpdr"; version="1.2.1"; sha256="1qa9ndb5aqbmlqbl0ivh10ddah2rbhsc6928dml20fjgz7lggdww"; depends=[curl dplyr httr lubridate magrittr purrr readxl rlang rvest tidyr xml2]; }; iilasso = derive2 { name="iilasso"; version="0.0.2"; sha256="043m1n5840459zsknkb54801apb0a2cqfprncmj2wp235rbqj832"; depends=[BH Matrix Rcpp]; }; - ijtiff = derive2 { name="ijtiff"; version="2.2.6"; sha256="15jvkavpww7jgvx8rr8fj6ihy4zicaxwi7hm16aly5zs3r1qcr3r"; depends=[checkmate cli dplyr fs magrittr purrr readr rlang strex stringr withr zeallot]; }; + ijtiff = derive2 { name="ijtiff"; version="2.2.7"; sha256="187ykflj7b51j2jziqb45bcv9319w67g179505m74kjka897rir4"; depends=[checkmate cli dplyr fs magrittr purrr readr rlang strex stringr withr zeallot]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imabc = derive2 { name="imabc"; version="1.0.0"; sha256="1p420jlvqqcqdjqp7y4mcjkzimw3qiygph5yrvmm75znax3fkg4z"; depends=[data_table foreach lhs MASS truncnorm]; }; image_CannyEdges = derive2 { name="image.CannyEdges"; version="0.1.0"; sha256="0c8pvk91xyys6d2i03yy88kylb3jli5jkpq2s069n7p0yl3z7rr1"; depends=[Rcpp]; }; @@ -10240,19 +10664,20 @@ in with self; { image_CornerDetectionHarris = derive2 { name="image.CornerDetectionHarris"; version="0.1.1"; sha256="150qz9wfpa33914x1am2ifzm0k2bdkmgk1qypvgxy958ginlaxsg"; depends=[Rcpp]; }; image_LineSegmentDetector = derive2 { name="image.LineSegmentDetector"; version="0.1.0"; sha256="1mx6vkmm9miwqdd5vil44if0dikzn5cy3kxvb3vp0kwfm8k36ib5"; depends=[Rcpp sp]; }; image_Otsu = derive2 { name="image.Otsu"; version="0.1"; sha256="0van4w7f3rnd2p5fsfjm7pq1j7ky90z9j0sir1mszjxjkcj6s9rz"; depends=[Rcpp]; }; - image_binarization = derive2 { name="image.binarization"; version="0.1.1"; sha256="1dajmffxali1kj54lfvapgb0vv5bbxxy7wxdsr4p5dv29gjwbl7i"; depends=[magick Rcpp]; }; + image_binarization = derive2 { name="image.binarization"; version="0.1.2"; sha256="0gy1zhc1ly8x02f3s87wjgpvp8xmhh2a1cc9yrrvnr22lyacl886"; depends=[magick Rcpp]; }; image_dlib = derive2 { name="image.dlib"; version="0.1.0"; sha256="118zwalpxcnn2fgjv8xsp763yvbqcyv81p6fblxizlnimyrjva71"; depends=[Rcpp]; }; image_libfacedetection = derive2 { name="image.libfacedetection"; version="0.1"; sha256="0mr7zrqd73mhvs918615lwsf2bgg63x3wh16wdpwhb2zd7ybm87a"; depends=[Rcpp]; }; - image_textlinedetector = derive2 { name="image.textlinedetector"; version="0.1.3"; sha256="0fgzdq0bv7bixv6gsxkcmc8sa0q0yj7ai9kjgir9l2pww98mia2x"; depends=[magick Rcpp]; }; + image_textlinedetector = derive2 { name="image.textlinedetector"; version="0.1.5"; sha256="1bbakqz7zrsdyzxgvv6czh8cgwj0qbazhfpacbm04pbpji5iilxw"; depends=[magick Rcpp]; }; imageData = derive2 { name="imageData"; version="0.1-61"; sha256="0bavyd8njfjd0l8dcsm6gklgc81kykl275w2gpvb5cxrhb9yp32n"; depends=[dae GGally ggplot2 Hmisc RColorBrewer readxl reshape]; }; imagefluency = derive2 { name="imagefluency"; version="0.2.3"; sha256="0f4kizxc86q6pgx5dbp14y6866b1ldyf7zgpfikd2iqhvxbs7qwa"; depends=[magick OpenImageR pracma R_utils readbitmap]; }; imagefx = derive2 { name="imagefx"; version="0.4.1"; sha256="1mxd33y8zbq8kig6m6xihb5w8wrjppgmpyjspvaxjwk7si9a09k1"; depends=[moments signal]; }; - imager = derive2 { name="imager"; version="0.42.8"; sha256="1kzl93l6k9i4528bbycbqxdn28mj7hnx0fbxisva859xl1wys5c5"; depends=[downloader igraph jpeg magrittr png purrr Rcpp readbitmap stringr]; }; + imager = derive2 { name="imager"; version="0.42.10"; sha256="1vmfmmawbk8sgyba87igaxpwb926nb1ji8a08ad3dqfj7aq9x4q1"; depends=[downloader igraph jpeg magrittr png purrr Rcpp readbitmap stringr]; }; imagerExtra = derive2 { name="imagerExtra"; version="1.3.2"; sha256="1f6mxfn7am4ph9acbbx53r4bk4vsm73p7arh8rvrsic9pgma3gqf"; depends=[fftwtools imager magrittr Rcpp]; }; imageviewer = derive2 { name="imageviewer"; version="0.1.0"; sha256="1rsrwy5v0gnsmbay1zqijhvll2l1bs844m52w65588j9nlx4fci9"; depends=[htmlwidgets]; }; imagine = derive2 { name="imagine"; version="1.5.3"; sha256="1ss0gm769s8cmma3hnah15vmc2c5wxn0l3s4vas7jbvkwi62am6h"; depends=[Rcpp]; }; imbalance = derive2 { name="imbalance"; version="1.0.2.1"; sha256="14f7p3x8818b1asfynp3w4sxdacsd14dzs7r166s1jdadwwfwi1s"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imbibe = derive2 { name="imbibe"; version="0.1.0"; sha256="0l7wn7vcbb466a4i3w302ficdy0jvy2jh5qizfn7ahpcs7lpx6hr"; depends=[magrittr Rcpp RNifti]; }; + imcExperiment = derive2 { name="imcExperiment"; version="0.99.0"; sha256="0fagasb94q7gxx49c7n4p2cb9j3n5qnfx86s7nvz4naicy96qbyr"; depends=[S4Vectors SingleCellExperiment spatstat_geom SummarizedExperiment]; }; imdbapi = derive2 { name="imdbapi"; version="0.1.0"; sha256="11v7c0s7qqf02b186md5lhgkgmywkn8lmmanlz3gfcxca26g047y"; depends=[dplyr httr stringr]; }; imfr = derive2 { name="imfr"; version="0.1.9.1"; sha256="1l1lvzvz9hsqwk60k2w8ry8mvgzj7wrd6ycfhgwv39xid9vk70g7"; depends=[dplyr httr jsonlite]; }; imgpalr = derive2 { name="imgpalr"; version="0.3.1"; sha256="0v9npy63mv9r9wnd8pcdw4rkr0bybhhmkj36sza7dah92i06il17"; depends=[downloader dplyr farver jpeg magrittr tibble]; }; @@ -10261,12 +10686,14 @@ in with self; { iml = derive2 { name="iml"; version="0.10.1"; sha256="1wz6xqhvqkzj723nw7qrlwb1171wvvpxhv3pa8cq7vcbkiflq37r"; depends=[checkmate data_table Formula future future_apply ggplot2 keras Metrics prediction R6]; }; immcp = derive2 { name="immcp"; version="0.9.2"; sha256="07q5dhz12pvy631jxans6q62kzqx9pil3ra72pgqlcxpndvv6f4w"; depends=[Boruta clusterProfiler corrr ggplot2 GSEABase GSVA igraph limma magrittr Matrix pbapply proxyC reshape2 RobustRankAggreg visNetwork]; }; immer = derive2 { name="immer"; version="1.1-35"; sha256="1nmf9wxxyq3p8b5kikpsr8b0v4s84zjpahg1rxvcrhc8blg26hjq"; depends=[CDM coda MASS psychotools Rcpp RcppArmadillo sirt TAM]; }; + immunarch = derive2 { name="immunarch"; version="0.6.6"; sha256="0f6yrjxspcpz51d1q0b2xc3nhwg64z6h0y74jpshc9i15sxlbjb4"; depends=[airr circlize data_table dbplyr dplyr dtplyr factoextra fpc ggalluvial ggplot2 ggpubr ggrepel ggseqlogo magrittr MASS patchwork pheatmap plyr Rcpp readr readxl reshape2 rlang Rtsne scales shiny shinythemes stringr tibble UpSetR]; }; immuneSIM = derive2 { name="immuneSIM"; version="0.8.7"; sha256="0brj12xnkzmn3n91vb39fq3q68wmzmwx9l38dl38yypp0l8pknjl"; depends=[Biostrings data_table ggplot2 ggthemes igraph Metrics plyr poweRlaw RColorBrewer repmis reshape2 stringdist stringr]; }; - imp4p = derive2 { name="imp4p"; version="1.1"; sha256="1zl3lfqh3gjfwd2kjxp8ijxni07b7xv0zhmrx8jnsng85sx3mzdf"; depends=[Iso missForest missMDA norm Rcpp truncnorm]; }; + imp4p = derive2 { name="imp4p"; version="1.2"; sha256="1ld8bjjrlij9m7xns7izibag9mndrfh21xgq1w7g3bh5ag9p9fs0"; depends=[Iso missForest missMDA norm Rcpp truncnorm]; }; impactflu = derive2 { name="impactflu"; version="0.1.0"; sha256="0wpaq2q61g6hl9fffs5cjbzdz1qc8dxsbknfs0iarwkn08460bn5"; depends=[dplyr glue lubridate magrittr Rcpp rlang tibble]; }; + impactr = derive2 { name="impactr"; version="0.2.0"; sha256="01xgc865nx6sm4p9ldrhdz2q0m140krhxcd5v20nyr4n7qcz612y"; depends=[glue lubridate lvmisc pillar pracma purrr Rcpp rlang signal stringr tibble toOrdinal vroom]; }; impimp = derive2 { name="impimp"; version="0.3.1"; sha256="0xkxph4f1rcpkryx9v339bfbsnq3xwdj1flb4j2dgh99apj126sq"; depends=[]; }; implicitMeasures = derive2 { name="implicitMeasures"; version="0.2.0"; sha256="0w0dwnzfhw5v5j7q3zpfsca4ydmq7b9fzspvyf9sibyh587isb9c"; depends=[ggplot2 stringr tidyr xtable]; }; - implied = derive2 { name="implied"; version="0.3.1"; sha256="11mrvpsh9qc5a5s5mpbsksri6vx36ij1gvpli6lyz6dkg48a9kdn"; depends=[]; }; + implied = derive2 { name="implied"; version="0.4.0"; sha256="00wv05pb59p86ddfwha7ilfss36si8yljnmkmayiqcazn32ylzg8"; depends=[]; }; implyr = derive2 { name="implyr"; version="0.4.0"; sha256="0rblsmx1z2n4g3fims5wa3wyf5znr0gkwd2yfz3130bcm6346da0"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; r_import = derive2 { name="import"; version="1.2.0"; sha256="018s0x224gqnv4cjfh0fwliyfg6ma9vslmwybrlizfsmqcc5wp37"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; @@ -10285,16 +10712,17 @@ in with self; { imputeYn = derive2 { name="imputeYn"; version="1.3"; sha256="1b21w1aa5f7yiq8k0wa86wvbg4ij7f6ldwn6asfqwb0b90rvsgvs"; depends=[boot emplik mvtnorm quadprog survival]; }; imsig = derive2 { name="imsig"; version="1.1.3"; sha256="175is0b39grc609dskv9274czv4iwnmlg81dl4nr01xdp6f7g487"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; + inTextSummaryTable = derive2 { name="inTextSummaryTable"; version="3.0.1"; sha256="0cyrgpz4r80xwxfg1vk67llpqcichk46q42m3mj0jxp9layg66l5"; depends=[clinUtils cowplot dplyr flextable ggplot2 ggrepel magrittr officer plyr reshape2 scales]; }; inTrees = derive2 { name="inTrees"; version="1.2"; sha256="1mwn2ijkyw0y9xcgrr56wxd2326ikarlsi79l59dplvlx2iwbi6c"; depends=[arules data_table gbm RRF xgboost xtable]; }; inaparc = derive2 { name="inaparc"; version="1.1.0"; sha256="0ni34bkl7v1ypci8j8qhkfbf7gnx77wi4v9w1ww18z2jizsrk5h3"; depends=[kpeaks lhs]; }; inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; incR = derive2 { name="incR"; version="1.1.0"; sha256="0q41bs7pf6hqyfwvcwc2sxq44jq95qq3qsddz53f8gphwjsyf1v7"; depends=[dplyr ggplot2 lubridate maptools rgeos]; }; inca = derive2 { name="inca"; version="0.0.4"; sha256="1r3niibd6pja59am8in9gpyvxi2g5bh8bqqhdixzwaj3xzyyipii"; depends=[Matrix Rcpp RcppArmadillo]; }; incadata = derive2 { name="incadata"; version="0.9.1"; sha256="0987zazkp3cxvk88i3yqb70s2i1cg108vc8wyhh2867s3rqdrpgh"; depends=[decoder rvest sweidnumbr xml2]; }; - incase = derive2 { name="incase"; version="0.3.0"; sha256="0wx5j50rbwxg1nsxhhwjcjzd96kgbw8raz6h0k8pbg102hcac0g0"; depends=[backports magrittr plu rlang]; }; + incase = derive2 { name="incase"; version="0.3.1"; sha256="01x1alrk3pp4zi7r4nxnn9y16129ggmiqjys5sfhlybs505yq5vw"; depends=[backports magrittr plu rlang]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; incidence = derive2 { name="incidence"; version="1.7.3"; sha256="1wdxh2p7scm419fqki0i7vsz45rd7557h5n3zf9fshb8x1fdf2z7"; depends=[aweek ggplot2]; }; - incidence2 = derive2 { name="incidence2"; version="1.0.0"; sha256="1g18rd5z1k3is90yyqgxyjyqad2d35n8zig26dp35pn1klhjx2gf"; depends=[data_table ellipsis grates pillar rlang tibble tidyselect vctrs]; }; + incidence2 = derive2 { name="incidence2"; version="1.2.2"; sha256="1sj79bm4pw8xqpjk5h4s7igqk34n5mhkd2yhlw32hbv0pk8f59lp"; depends=[clock data_table dplyr ellipsis grates lifecycle pillar rlang tibble tidyr tidyselect vctrs]; }; incidental = derive2 { name="incidental"; version="0.1"; sha256="012pdwrkzlbnrrkvy67l6nvs1lrjgrzhfh3v4rqzk2ypdvfm3wmx"; depends=[dlnm ggplot2 MASS matrixStats numDeriv]; }; inctools = derive2 { name="inctools"; version="1.0.15"; sha256="0ikldiwgizs2p9vcalk5729dr6krysnyr4ni0ybg9gljw7iafdlf"; depends=[binom cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.9"; sha256="0i4qnvc0xb3ngnk8xdscmx7qnicfs7s6czawf6schb1nh2pjpzyq"; depends=[ape numDeriv phangorn Rcpp]; }; @@ -10302,24 +10730,28 @@ in with self; { indicspecies = derive2 { name="indicspecies"; version="1.7.9"; sha256="1xza0ha42frz5wizf268j49y3201vpsm4kgj0czsw9wygzjl008f"; depends=[permute]; }; indiedown = derive2 { name="indiedown"; version="0.1.1"; sha256="0r46r6s0asd182gs5map4wilhfb7jhgrcinnl36ib3q1xxn06457"; depends=[cli fs gfonts rlang withr]; }; indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; + individual = derive2 { name="individual"; version="0.1.4"; sha256="0s6k2q68mzv9am6cqx4kxx5zk411364wwnpwh0sfyg5ixznds6jq"; depends=[R6 Rcpp testthat]; }; + industRial = derive2 { name="industRial"; version="0.1.0"; sha256="0zgnykbr71pi3nii178ijmzd8ijwf3g8y8yz6g3jy4c0by7w676s"; depends=[dplyr ggplot2 lattice magrittr rlang SixSigma tidyr]; }; inegiR = derive2 { name="inegiR"; version="3.0.0"; sha256="1rhkdmpz7mxi7ddyygss5rlh3c8hgxhzdk3fnvnlizc1l55cc6c0"; depends=[jsonlite lubridate plyr tibbletime XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; ineqJD = derive2 { name="ineqJD"; version="1.0"; sha256="0anv384jwzn5gkc0jqsl81bkmrjd21br99c5q30xd6ncxavj4s57"; depends=[]; }; - infer = derive2 { name="infer"; version="0.5.4"; sha256="0wvvgqjhyv7ql98cjzqad61wbmk7xrqd1ybk894jr5cmza13c8w2"; depends=[dplyr ggplot2 glue magrittr purrr rlang tibble]; }; + infer = derive2 { name="infer"; version="1.0.0"; sha256="1qbpcn7jqbvgwnpiyylj021j8m33p58a204yd1pfkpzd3x2lbsm6"; depends=[broom dplyr generics ggplot2 glue magrittr patchwork purrr rlang tibble tidyr]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; inferference = derive2 { name="inferference"; version="1.0.2"; sha256="171h9zhvaza7fklcg07wk9sm8k2fy39k3cdjkzb3vk8p8acd051v"; depends=[Formula lme4 numDeriv]; }; - inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; + inferr = derive2 { name="inferr"; version="0.3.1"; sha256="1ma90f31jcd65l5v3wqbx4x61gw3iay1a2hwjsd5aln1ivbgmzsv"; depends=[data_table magrittr Rcpp]; }; infinitefactor = derive2 { name="infinitefactor"; version="1.0"; sha256="0j6f9q8z81znwakyx4h0l8ypz0y4yv11d7l3rwljmn4rgspyjl5c"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; infix = derive2 { name="infix"; version="0.1.0"; sha256="1zgy8f8b9pmpvpgqh3niczkr94xkc53xcjim73djmd10azw3kgrk"; depends=[magrittr]; }; inflection = derive2 { name="inflection"; version="1.3.5"; sha256="1xyx2jnvyjn7n1xsg3m2qpl03qrnmlp9b8fa2h77f922fwj1zxgv"; depends=[]; }; influence_ME = derive2 { name="influence.ME"; version="0.9-9"; sha256="0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v"; depends=[lattice lme4 Matrix]; }; influence_SEM = derive2 { name="influence.SEM"; version="2.2"; sha256="1cabl6486mlrmk0418s18wii3n6nl1ckv6w9281wdk4fy27y9qk2"; depends=[lavaan]; }; influenceAUC = derive2 { name="influenceAUC"; version="0.1.2"; sha256="0pscwfxs2y780lzd5sxldnnkzzs2lsjdwz71z44kn7884wqmikpm"; depends=[dplyr geigen ggplot2 ggrepel ROCR]; }; - influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; - influential = derive2 { name="influential"; version="2.2.2"; sha256="0553ipn9djdayjsq1pd0gw2bxxrqj7v18pay0idqwx0hl3bghz2y"; depends=[coop ggplot2 igraph janitor ranger]; }; + influenceR = derive2 { name="influenceR"; version="0.1.0.1"; sha256="0rj7rm236vn3v8302nwl12s0kvpv6xpdbm3q3gxk7vgwfl8nzi33"; depends=[igraph Matrix]; }; + influential = derive2 { name="influential"; version="2.2.3"; sha256="13jlib9mczpfrmisrzksxjn45i03ci0ga64qzqkf2ffwxkaw2zdc"; depends=[coop ggplot2 igraph janitor ranger]; }; + influxdbclient = derive2 { name="influxdbclient"; version="0.1.0"; sha256="0fdh1c9hfzamflzq2bsrkadqlysa95bqzl2xm60kr0ka1iamn7cj"; depends=[bit64 httr jsonlite nanotime plyr R6]; }; influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.2"; sha256="0r1capiv4zr31dsy0sqly9zb00i86zq2ihbgsmb5g4cy0f04xlqz"; depends=[MASS]; }; informR = derive2 { name="informR"; version="1.0-5"; sha256="16pz47wlr1gr8z5hdnrjpczm967khqiqgdfiw15a0bby6qdvni2y"; depends=[abind relevent]; }; + informedSen = derive2 { name="informedSen"; version="1.0.7"; sha256="1zb93289jszyj57ji00r35hx8ralxw2n6i384h6myxddgl377qfv"; depends=[sensitivitymult]; }; infotheo = derive2 { name="infotheo"; version="1.2.0"; sha256="18xacczfq3z3xpy434js4nf3l19lczngzd0lq26wh22pvg1yniwv"; depends=[]; }; infra = derive2 { name="infra"; version="0.1.2"; sha256="0jycnnmrrjq37lv67xbvh6p63d6l4vbgf3i1z9y7r75d6asspzn1"; depends=[]; }; infraFDTD_assist = derive2 { name="infraFDTD.assist"; version="0.6"; sha256="04j5nl5vxk79iciz6s9bpiyn319c2dbh7fdahgwira2r30w2fxv9"; depends=[fields]; }; @@ -10329,40 +10761,42 @@ in with self; { injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; inlabru = derive2 { name="inlabru"; version="2.3.1"; sha256="19rljxw8rimyk6iwh5albir5lgakxqn5i96mi8p4k9rr3asx8s8k"; depends=[ggplot2 Matrix rgdal rgeos sp withr]; }; inldata = derive2 { name="inldata"; version="1.0.3"; sha256="0iz3dlmaw6p81lj406nq4sg4qvl289mn95by10r3zrikf39l0jq2"; depends=[raster sp]; }; - inline = derive2 { name="inline"; version="0.3.17"; sha256="1wslsn60q959yrr27cwanba43qlpfaxzdli46i9dc26lxfr5fa3r"; depends=[]; }; + inline = derive2 { name="inline"; version="0.3.19"; sha256="1mcr9hgq6kkq03n7pkcccxa7vg8jma0q7lfxc5vvkc6snydk1s8f"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2019.12.5"; sha256="11d8cnrzgq95w7hn234rcwrr1mmrv63f69807pnzxizxbgnp7wz3"; depends=[]; }; inlmisc = derive2 { name="inlmisc"; version="0.5.2"; sha256="1jg92fy9dg9rv0sdzzcc7vylkx6z3l0b2q7rba63dpkdb1vqrwls"; depends=[checkmate data_table GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos rmarkdown scales sp tinytex webshot wordcloud2 xtable yaml]; }; inops = derive2 { name="inops"; version="0.0.1"; sha256="1y402a9r542hpwd1nfdc07mbgnf9alpnykl9di1v8fy0qly8s0an"; depends=[]; }; inpdfr = derive2 { name="inpdfr"; version="0.1.11"; sha256="1wnz73ggc7xcgynvdlvgz26qkfjmxxy0xg8gkf1far5346g4qd9y"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; inplace = derive2 { name="inplace"; version="0.1.2"; sha256="06jb8xzjqywdww8j2i59c8663dfbrhnvj0lh3xm73j39sig6vh7l"; depends=[Rcpp]; }; insane = derive2 { name="insane"; version="0.1.0"; sha256="144fq1lys6wy78vnmz1vd4ghs8agraj1hgg0vwlxcnbykmf50i95"; depends=[broom dplyr DT ggbeeswarm ggplot2 ggpubr ggthemes glue patchwork purrr readxl shiny tidyr]; }; - insect = derive2 { name="insect"; version="1.2.0"; sha256="0lbck8jbhymzkhm1iqd2y2xg8a26yjizw7x31b1l1kqc1l0p3kmv"; depends=[ape aphid kmer openssl phylogram RANN seqinr xml2]; }; - insee = derive2 { name="insee"; version="1.0.0"; sha256="1g4c2lcdygdxmmrp5f723zmylxsxl5iy8vhrm4msa7flf8gda50l"; depends=[crayon dplyr httr lubridate openssl purrr rappdirs readsdmx rlang stringr tibble tidyselect xml2]; }; - insight = derive2 { name="insight"; version="0.13.2"; sha256="03b7kd17h25mi1si40ibcp3jpasyqpj51mr8js0ywywyfw7909j1"; depends=[]; }; + insect = derive2 { name="insect"; version="1.4.2"; sha256="0pbac9il1jrhii0hxvvqjc3phyr2iamxwzanxx5mrkyjh2wsl3jh"; depends=[ape aphid kmer openssl phylogram RANN seqinr xml2]; }; + insee = derive2 { name="insee"; version="1.1.1"; sha256="04rv6d2p6z6w5hz4l1g2jjqbx032w5wajxf34f8l3a5nifwl23qn"; depends=[crayon dplyr httr lubridate openssl purrr rappdirs readsdmx rlang stringr tibble tidyselect xml2]; }; + insight = derive2 { name="insight"; version="0.14.4"; sha256="0h63nr337zbczbj9izyb7g5dlzwail5w70hbbn45paq6vybkqks3"; depends=[]; }; insol = derive2 { name="insol"; version="1.2.2"; sha256="166kgxgzbh55y2qqya6c2si22x0v7asi70im054g6xxwc5187kh3"; depends=[raster]; }; inspectdf = derive2 { name="inspectdf"; version="0.0.11"; sha256="19ainhxgda58cb70gwxki618wln1v1k4iwvnlvy6s7aldry4wgc4"; depends=[dplyr ggfittext ggplot2 magrittr progress Rcpp tibble tidyr]; }; - inspector = derive2 { name="inspector"; version="1.0.2"; sha256="08dx800dikssljjvwzv6fji6pp7k7lkzjl7y1y6r1j5qxpn7z5mw"; depends=[Rdpack]; }; + inspector = derive2 { name="inspector"; version="1.0.3"; sha256="16gc98af6wmwf32fz8zml5v17g5lkiybzyzsqgphx0k19hrbc6kr"; depends=[Rdpack]; }; instaR = derive2 { name="instaR"; version="0.2.4"; sha256="0c4m471ragkpksr0h21cdgnjxcknf01xqz543dahxgzjg9ncjwhg"; depends=[httr jsonlite]; }; install_load = derive2 { name="install.load"; version="1.2.3"; sha256="0z4klcpwdlmhwvk41z9q4c4382z8glad27h0gai93zyciy44sdyx"; depends=[assertthat checkmate fastmatch]; }; + installr = derive2 { name="installr"; version="0.23.2"; sha256="1xyzap1injimyib16srhbm0hchh1bcd5vg9d9wbvhf8dlpkaxw4q"; depends=[stringr]; }; insuranceData = derive2 { name="insuranceData"; version="1.0"; sha256="0wryh8i1v3bnpbqn6d6dpxr9bwwl6mnh5cb5igz0yanh4m1rx96w"; depends=[]; }; - insurancerating = derive2 { name="insurancerating"; version="0.6.5"; sha256="0bzdfg76gigacyiwsv5saprsqi6l9cj2plvlwzn54cixwxcsh5sf"; depends=[ciTools classInt colorspace data_table DHARMa dplyr evtree ggplot2 insight lubridate magrittr mgcv patchwork scales stringr tidyr tidyselect]; }; + insurancerating = derive2 { name="insurancerating"; version="0.6.7"; sha256="15rrxp6h8h3si1842vqxpa72s06m8i8wjs5kw4r6fbwhgl9b2fjr"; depends=[ciTools classInt colorspace data_table DHARMa dplyr evtree ggplot2 insight lubridate magrittr mgcv patchwork scales stringr tidyr tidyselect]; }; intRegGOF = derive2 { name="intRegGOF"; version="0.85-5"; sha256="0xjq8vdlgqlzrvp752gd4qfrpnpapx7k6xzfsvfril8ngvm9a162"; depends=[]; }; intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-9"; sha256="060sghkqsdrxpa340rvjskh2wafdkffa5q8nlbg1msnsmk639lkn"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; - intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-13"; sha256="1qw91rf8f2x7xky2wqir78bli4jvwh9fwm0yl3x863j5f7nccfjx"; depends=[automap gstat intamap rgdal sp spatstat_geom]; }; - intccr = derive2 { name="intccr"; version="3.0.2"; sha256="1v2zhyap414w41dgy2jjz3fnrvk0vawf02dvb1nprrid7fqsnf9i"; depends=[alabama doParallel foreach MASS]; }; - intcensROC = derive2 { name="intcensROC"; version="0.1.2"; sha256="0f1yf7wn0qd0xa9x2lsdicwjisy39bvyrbayjl8m6hb7h0ng0v2m"; depends=[pracma Rcpp RcppEigen]; }; + intccr = derive2 { name="intccr"; version="3.0.3"; sha256="1sg4pda60xx2zqhwckc0nq4b82xxw0jinaw13p671pw9gb4mz38g"; depends=[alabama doParallel foreach MASS]; }; + intcensROC = derive2 { name="intcensROC"; version="0.1.3"; sha256="1raqjc3g9fgyd01iax7hrmkk3nzzfi34a1ywhjrkwv1n9gsc58ns"; depends=[pracma Rcpp RcppEigen]; }; intdag = derive2 { name="intdag"; version="1.0.1"; sha256="0mb0a1ccc67clfa75b4hl901zdmx7fxw713c4ybx3i5wc2ldl8ph"; depends=[]; }; + intePareto = derive2 { name="intePareto"; version="0.1.2"; sha256="0shq97r6x4j7p9vcf855jcvmfhghngbhk5dfqlqqhhcf8ibm2si5"; depends=[biomaRt DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges rPref Rsamtools]; }; integIRTy = derive2 { name="integIRTy"; version="1.0.6"; sha256="0nyp9nixwyz1n2nydkh64lmd5z4qjcabwa1pyzv69rgw5gx60020"; depends=[abind doParallel foreach ltm MASS mclust]; }; integr = derive2 { name="integr"; version="1.0.0"; sha256="172vj29bdk42ibgwj7dl06wslpg2dccp1i8iscbz1yd0j5kw36sq"; depends=[DiagrammeR DiagrammeRsvg dplyr gtools rsvg]; }; intensegRid = derive2 { name="intensegRid"; version="0.1.1"; sha256="15vjf39fx6bkay15nbmqnv5vp8w6xy6fzf1lglqr6506pyaqh8w8"; depends=[dplyr httr jsonlite lubridate magrittr purrr rlang tibble tidyr]; }; intensity_analysis = derive2 { name="intensity.analysis"; version="0.1.6"; sha256="1ydmn7njqk6i2667zaha8mvfndss4im39czadg1f3z6sndp2lsji"; depends=[diffeR ggplot2 raster reshape2 rgdal]; }; interacCircos = derive2 { name="interacCircos"; version="1.0.0"; sha256="1waj0saavvaw2qzhbwcj1k0a2dnmq7zbkdnmb93xj6j1lhfjhbdy"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; - interactionR = derive2 { name="interactionR"; version="0.1.1"; sha256="1gw1kvv76rrfsq67dyhm5ydpb1y5fxp6jqfcqdw50f4k0m76z55k"; depends=[car flextable msm officer]; }; + interactionR = derive2 { name="interactionR"; version="0.1.3"; sha256="1wckp3vz06ary2ydk22iykp1ck3i0bqhq51d8jyafq2h0rjhkyc8"; depends=[car flextable msm officer]; }; interactionTest = derive2 { name="interactionTest"; version="1.2"; sha256="0ycr839l07xahakr4r2jvlmd0fcxfm4qi3g8agnyh24c2kwl3ck2"; depends=[]; }; - interactions = derive2 { name="interactions"; version="1.1.3"; sha256="11nn3w4qsnh0idf7cwnrclg9h8vdjfl9rbvfk1c4l65pm4f61xrv"; depends=[cli crayon generics ggplot2 jtools rlang tibble]; }; - interep = derive2 { name="interep"; version="0.3.1"; sha256="0j5mpbx0h1p7si3n532fpzsq5d2ris77vmvqabz1vdzlv4dzlmk8"; depends=[MASS Rcpp RcppArmadillo]; }; + interactions = derive2 { name="interactions"; version="1.1.5"; sha256="16lrlj0rc9bkxgmackpvcx8wx9pbsnr55vak6zx022ss820h3ljj"; depends=[cli crayon generics ggplot2 jtools rlang tibble]; }; + interep = derive2 { name="interep"; version="0.3.2"; sha256="1a4ws8wsrlkiq8dxrx85cq758dim3ym0sirag1k7hhv6pl825cxs"; depends=[MASS Rcpp RcppArmadillo]; }; interferenceCI = derive2 { name="interferenceCI"; version="1.1"; sha256="19ky10nn6ygma6yy5h1krxx61aikh3yx5y39p68a944mz8f72vsn"; depends=[gtools]; }; + interflex = derive2 { name="interflex"; version="1.2.6"; sha256="0crijwb076b3hprjnji52l8qnd5pp3w7pxy214sfqrg2g3y4gcfl"; depends=[AER doParallel foreach future ggplot2 ggplotify gridExtra gtable lfe Lmoments lmtest MASS mgcv ModelMetrics mvtnorm pcse pROC RColorBrewer Rcpp RcppArmadillo sandwich]; }; interfr = derive2 { name="interfr"; version="0.1.0"; sha256="1wn7i8dsll1qq3v39hgpbqnkjc8f4wlffy73453rw9lpq61y2fgj"; depends=[CircStats colorSpec plotrix]; }; intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; }; interim = derive2 { name="interim"; version="0.8.0"; sha256="1hcq1cx6fv4ivvyd3ww3gsbw12g6rw83qqqbrcgzlnjl1q0jh3nf"; depends=[]; }; @@ -10378,7 +10812,7 @@ in with self; { intervals = derive2 { name="intervals"; version="0.15.2"; sha256="0mvwfwc03ifb30a3dzbmkv9adwqb8ajxhcw24d8xip8px063plhb"; depends=[]; }; intervcomp = derive2 { name="intervcomp"; version="0.1.2"; sha256="1l6x1fl84li6is3b92b96q3fbv0rpgqy2lvw9cbi2cq8nh9imnyx"; depends=[]; }; interventionalDBN = derive2 { name="interventionalDBN"; version="1.2.2"; sha256="0wpp4bfi22ncvl0vdivniwwvcqgnpifpgxb4g5jbyvr0z735cd9w"; depends=[]; }; - inti = derive2 { name="inti"; version="0.3.0"; sha256="1plz2ld5damfll27xxgcy166p1c7d1s2zbzdp362hvqn838qkkl7"; depends=[agricolae dplyr DT emmeans FactoMineR ggplot2 lme4 purrr shiny stringi stringr tibble tidyr]; }; + inti = derive2 { name="inti"; version="0.4.3"; sha256="1klyivrknx3qf8vsdakkq56xd0wmbmgwp6qpcdnzpd3mma36n0k6"; depends=[agricolae dplyr DT emmeans FactoMineR ggplot2 lme4 purrr shiny stringi stringr tibble tidyr]; }; intkrige = derive2 { name="intkrige"; version="1.0.1"; sha256="1p3fn5nzn1iliy025187k590qrsw3z3d47p67gzwwd6h050yrl86"; depends=[gstat raster Rcpp RcppArmadillo Rdpack sp]; }; intmed = derive2 { name="intmed"; version="0.1.2"; sha256="0amcqzinj35yvb9nfy808bz098dqmnds13z335lgqm6sykriyjpl"; depends=[doParallel dplyr foreach MASS mice stringr tibble]; }; intrinsicDimension = derive2 { name="intrinsicDimension"; version="1.2.0"; sha256="0cka20ifxx9njnvp18bzhrvmh3cwjnxkc0a23qzi43dahc51ijbc"; depends=[yaImpute]; }; @@ -10391,7 +10825,7 @@ in with self; { inum = derive2 { name="inum"; version="1.0-4"; sha256="1khkzja8lwn9075864vbyajqina9m588ahf1fsrrajrsqilyzssz"; depends=[libcoin]; }; invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; }; invLT = derive2 { name="invLT"; version="0.2.1"; sha256="0dcr2cclgzkvsw1lysmjrkwgahas96rjc328yc7a1a56pf62kw2v"; depends=[]; }; - invacost = derive2 { name="invacost"; version="1.0"; sha256="1qy7a59ml1bxfsg161qhhz5iw5kcml4l31la44ippyiail32vn3m"; depends=[dplyr earth ggplot2 lmtest mgcv quantreg robustbase sandwich scales]; }; + invacost = derive2 { name="invacost"; version="1.1"; sha256="0ri743v8a1fh4gpy9va38in20784g6rxvm34aw0k3clispixxl6k"; depends=[dplyr earth ggplot2 lmtest mgcv quantreg robustbase sandwich scales]; }; invctr = derive2 { name="invctr"; version="0.1.0"; sha256="0jrbr53kvwrf800z18vz9df9bk7swpd4avnyf59ggz2bc0z2ijwk"; depends=[plyr rlang]; }; inventorize = derive2 { name="inventorize"; version="1.0.6"; sha256="01rwqqljmlk5bwnvlx0qy6n67q2swjcxp90fp2wipyvl1f46h3m1"; depends=[dplyr ggplot2 magrittr plotly plyr tidyr]; }; inverseRegex = derive2 { name="inverseRegex"; version="0.1.0"; sha256="1wk3ac2rfy0m8442sa2m75s6l3wadx4d4cwas6c8n2xqkrphci87"; depends=[]; }; @@ -10404,34 +10838,35 @@ in with self; { ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; }; iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; - iotools = derive2 { name="iotools"; version="0.3-1"; sha256="0x24s38shvgqvxpx57qjf86g6f9p9y201yymdl61n5yw439pg88f"; depends=[]; }; - ip2location = derive2 { name="ip2location"; version="8.0.0"; sha256="1rhy3jlcl4hcynhjgy3gjx9g9kyn30gq1jwfpll23jixvmrx64by"; depends=[jsonlite reticulate stringr]; }; - ip2proxy = derive2 { name="ip2proxy"; version="1.0.0"; sha256="1l27v616qrz0n9i4s1vjbffwqy12cq4jklck83cd0503c86621d5"; depends=[jsonlite reticulate stringr]; }; + iotables = derive2 { name="iotables"; version="0.4.5"; sha256="1bza4yg27nr9b0210jwwnsvj479z5p9zxlcjjdg7xfga5zghxk70"; depends=[dplyr eurostat forcats kableExtra knitr lubridate magrittr plyr purrr readxl rlang tibble tidyr tidyselect]; }; + iotools = derive2 { name="iotools"; version="0.3-2"; sha256="07q0z0kszm1xx5hfhisfliyrcsxd8dc5mx0a2bwwnv5l1xzmix17"; depends=[]; }; + ip2location = derive2 { name="ip2location"; version="8.0.1"; sha256="0mf6ncckjjrq4dvd8pifz4izn4vqmsqq0pw36gm1zqzbyyvmqqya"; depends=[jsonlite reticulate stringr]; }; + ip2proxy = derive2 { name="ip2proxy"; version="1.1.0"; sha256="1hs7n33cn2drqig0p2ns0bnyx2af58x2rslih3yj85xx0dn87qgp"; depends=[jsonlite reticulate stringr]; }; ipADMIXTURE = derive2 { name="ipADMIXTURE"; version="0.1.0"; sha256="1fl7nyxg7gakjdggdc311wf037zaxwpqsw3ax7liq1pvw6flb9h7"; depends=[ape treemap]; }; ipa = derive2 { name="ipa"; version="0.1.0"; sha256="029vz7pb37vnqm7x6h53p0y7z0nx2s36yklyfn9sz21gknsi983j"; depends=[stringi]; }; - ipaddress = derive2 { name="ipaddress"; version="0.5.1"; sha256="128r4nbqrmmnxb85hvs32xybp32svn4c5096p3s052jhc30bj273"; depends=[AsioHeaders BH Rcpp rlang vctrs]; }; + ipaddress = derive2 { name="ipaddress"; version="0.5.3"; sha256="0jyhwxbphlmsk4kab2bl38x90szhw1pa35rq7kr1wdq4w0yaa696"; depends=[AsioHeaders Rcpp rlang vctrs]; }; ipc = derive2 { name="ipc"; version="0.1.3"; sha256="10h54j83l7khk1lkpdwn6hwaz31i3v6svg4q1lxzvr2aqdsj7hy0"; depends=[R6 shiny txtq]; }; ipcwswitch = derive2 { name="ipcwswitch"; version="1.0.4"; sha256="12z16c8sv1nhdv70kwx1a0wh588znkv5y5r0s9kcws0n3rjhzh9p"; depends=[survival]; }; ipdw = derive2 { name="ipdw"; version="0.2-9"; sha256="1vjq5wxfmx1vfclrj68mf3w0lmsxrppin1kph38s2qzcg0y74ghg"; depends=[gdistance raster rgeos sp]; }; + ipeadatar = derive2 { name="ipeadatar"; version="0.1.4"; sha256="1gr4snvls0c90ywfgm5274zx1mwhbdvvd7rb31697jpfnp9sdx32"; depends=[curl dplyr jsonlite lubridate magrittr purrr rlang sjlabelled stringr]; }; ipflasso = derive2 { name="ipflasso"; version="1.1"; sha256="0gf1yj35vr92qi59hffcf4hzrh2b439kfd6m745wgpxq6wic1hs3"; depends=[glmnet survival]; }; ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; }; ipfr = derive2 { name="ipfr"; version="1.0.2"; sha256="0q44zw5g76qfqrqv6w2a8p905n4ljxab9jmyqk6fv9vs8j2kyivg"; depends=[dplyr ggplot2 magrittr mlr tidyr]; }; ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; iplots = derive2 { name="iplots"; version="1.1-7.1"; sha256="1bz8n9cnx6zy3wsr49h55r0l5ikfl0xjg4r76fi4giid2a3ba4lf"; depends=[png rJava]; }; - ipmisc = derive2 { name="ipmisc"; version="6.0.0"; sha256="18fqbjfd7gyd0jp42058y0l1yaxb9a2r6aiq7wwivksjvcp8wh3b"; depends=[dplyr magrittr rlang tibble tidyr zeallot]; }; - ipmr = derive2 { name="ipmr"; version="0.0.1"; sha256="0l2x568lc4gxqy018kxr1mw3m315ka7wdc10sfvwmrcphnpkr3dw"; depends=[magrittr purrr Rcpp rlang]; }; + ipmisc = derive2 { name="ipmisc"; version="6.0.2"; sha256="1dn815p2k1v371pv5fra6541zwc1hyjzxlx11m8pgfcyrfgmicyk"; depends=[dplyr magrittr rlang tibble tidyr zeallot]; }; + ipmr = derive2 { name="ipmr"; version="0.0.4"; sha256="1j1dkfgglsx80872ck2hfd2bl4f2hzhfmlnlvyw6vdj2cnh728jv"; depends=[magrittr purrr Rcpp rlang]; }; ipptoolbox = derive2 { name="ipptoolbox"; version="1.2"; sha256="0scbny4crgr23qcp0vgsxhwmj5g5q5c1c4mb5mmb5njyvc34s01l"; depends=[AlgDesign copula evd kolmim triangle]; }; ipr = derive2 { name="ipr"; version="0.1.0"; sha256="1db06r784c6jga0anp6p5b3k47yfhr84nzxyjn52pc9zkg3yifjm"; depends=[]; }; - ipred = derive2 { name="ipred"; version="0.9-11"; sha256="04hfg27c72v0fz4091w3rgbc2vd7g6yl78y9plvsvh0vjlx8ymmp"; depends=[class MASS nnet prodlim rpart survival]; }; + ipred = derive2 { name="ipred"; version="0.9-12"; sha256="0hsq00382pfd9hzpcgphjxazbxm4zx0k2r6pk6kib56k0ibm7qfn"; depends=[class MASS nnet prodlim rpart survival]; }; iprior = derive2 { name="iprior"; version="0.7.3"; sha256="15qzqwikxy85fcd7psz363b5wb0kpi85icfyb47hbgdhln8fi2qb"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; ips = derive2 { name="ips"; version="0.0.11"; sha256="02jxanfhsjrabj33nwjv71vdc87hiyzikyqrfdj9ix6dky6lm199"; depends=[ape phangorn plyr seqinr XML]; }; - iptmnetr = derive2 { name="iptmnetr"; version="0.1.8"; sha256="040ym8560x0yzn9m0pb3awhcpjmsaj66vlqhmgha6mzd140wpqra"; depends=[httr jsonlite]; }; - iptools = derive2 { name="iptools"; version="0.6.1"; sha256="143gawwp3aja5vycl43n6x5hzg3yvagi8x10v9y92hkif9v075qq"; depends=[AsioHeaders BH Rcpp readr stringi triebeard]; }; + iptools = derive2 { name="iptools"; version="0.7.2"; sha256="1jjzigv4rh5ds99z6lqqymfiwi4wzfiv3xpqaib10vrchbvlsrhr"; depends=[AsioHeaders BH Rcpp stringi triebeard]; }; ipumsr = derive2 { name="ipumsr"; version="0.4.5"; sha256="1fkiy2xahyigll39jab9kh05wckx66f364rgf27cjaa5wzdmn12h"; depends=[dplyr haven hipread purrr R6 raster readr rlang tibble tidyselect xml2 zeallot]; }; ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; ipwCoxCSV = derive2 { name="ipwCoxCSV"; version="1.0"; sha256="0avnvf4pnpxnik3iwwglpwkc8h0vsx9v6fxldkbvq7l9bphdbba1"; depends=[survival]; }; ipwErrorY = derive2 { name="ipwErrorY"; version="2.1"; sha256="14p22mwc120kdlf6r1hfx4kp7nqrz2nl2vpvy45j8rbrc571b6ka"; depends=[nleqslv]; }; - iq = derive2 { name="iq"; version="1.9"; sha256="1kwf10b01xx8wrl9xxhnw9zdp1p3x9d3kfn82m74kvhnnhc720w3"; depends=[]; }; + iq = derive2 { name="iq"; version="1.9.1"; sha256="1n4hdkw37364ilc8v3bffmnwd7r8cpysn7jssf9h9jxh9pyd612y"; depends=[]; }; iqLearn = derive2 { name="iqLearn"; version="1.5"; sha256="1zn43zvx0mjzh96bm73scacmladamy8jmhxim7hcfq39cfhiw3c8"; depends=[]; }; irace = derive2 { name="irace"; version="3.4.1"; sha256="1dhlspv1gqg7cm7j95zhl0k2zr0s159krjmxm07k5fp68ax95sky"; depends=[R6]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; @@ -10451,16 +10886,20 @@ in with self; { irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; irtreliability = derive2 { name="irtreliability"; version="0.1-1"; sha256="15qs8bvgrwajj5kfd57rd34l1p2805ilyd7w60ngrqc14d6az9d2"; depends=[fastGHQuad ltm mirt]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; + isatabr = derive2 { name="isatabr"; version="1.0.0"; sha256="1n6ar4fd81mwq72ddyxrky99xn796ddydpb20g5kj6r3df7i3wgk"; depends=[]; }; isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; isdparser = derive2 { name="isdparser"; version="0.4.0"; sha256="05xkffmiiyhas5hzdjdylbrvh6fjc2fjh7s00iwjxkp4ba7rwq3g"; depends=[data_table lubridate tibble]; }; isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; - islasso = derive2 { name="islasso"; version="1.2.2"; sha256="0f5rir4pl8x717nwcrmzaqsqkhlkh71nlxpzv9j417737i12zjp0"; depends=[glmnet Matrix]; }; + islasso = derive2 { name="islasso"; version="1.3.1"; sha256="0k9zdfyq2zkw80bdvi3x4q48zq973mfc5g6hrgw029hr0glm85jb"; depends=[glmnet Matrix]; }; ismev = derive2 { name="ismev"; version="1.42"; sha256="19giigxwf62cdkf7mglsca649n2ignb9bxyg9zl7im1vm3ngnmqd"; depends=[mgcv]; }; - isni = derive2 { name="isni"; version="1.2"; sha256="1nw7i20fli3sg1g1dl17g8rz5bpx49gcmlyw4nvfyhdxqr38nb0r"; depends=[Formula lme4 matrixcalc mixor mvtnorm nlme nnet]; }; + isni = derive2 { name="isni"; version="1.3"; sha256="02a4vbhk26w796kxsyzqfp3bqxn64byfd5x5qma09lmdaxzmm71m"; depends=[Formula lme4 matrixcalc mvtnorm nlme nnet]; }; isnullptr = derive2 { name="isnullptr"; version="1.0.1"; sha256="0kwjxq59n3qncdw63vsdvz7v5mzbl5lmckdfgiiw35pzmahnxzh9"; depends=[]; }; isoSurv = derive2 { name="isoSurv"; version="0.2.0"; sha256="1y6wdmxzzdl1dkvab72s2smm3brqfl0y3b9al8fnj3h2b8lw502j"; depends=[Iso survival]; }; - isoband = derive2 { name="isoband"; version="0.2.4"; sha256="0z1qpxcl8b6fi691fbdr3vrb19mn4pas1iff62zl1bafzbdvpmcn"; depends=[]; }; + isoWater = derive2 { name="isoWater"; version="1.0.1"; sha256="1p7ymx01nlhi6488wfvw031cb8mw5483g9s4s70r5sxdmc8k9ybr"; depends=[abind doParallel foreach httr jsonlite R2jags R2WinBUGS]; }; + isoband = derive2 { name="isoband"; version="0.2.5"; sha256="19bbi0n0kz33xdgmdprcmc6raphd1hcm1w1brc16z5phcsh3zxa6"; depends=[]; }; isoboost = derive2 { name="isoboost"; version="1.0.1"; sha256="1c239l9rfjr8scpfq5c9rl55jabk64jchcdndjsb9s5qyx2x0qdr"; depends=[Iso isotone rpart]; }; + isobxr = derive2 { name="isobxr"; version="1.0.1"; sha256="18kjymp7lkdnmzsl9cdgqk6x1njqwgp9rsf7z3gi683yfjli7p3g"; depends=[data_table deSolve dplyr DT fs ggplot2 ggrepel metR qgraph R_utils readxl rlang shiny shinyFiles shinyjs shinythemes stringr writexl]; }; + isocalcR = derive2 { name="isocalcR"; version="0.0.2"; sha256="0ryg80jfakday1flrqv801rqi29v85qv0yrw3hijrh3rvj8pj7pa"; depends=[dplyr]; }; isocat = derive2 { name="isocat"; version="0.2.6"; sha256="1d6pi2l1lfi4226890lsfa02v0df1mc8gi214icsbk4fid4jygsx"; depends=[foreach magrittr plyr raster sp]; }; isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; }; isodistrreg = derive2 { name="isodistrreg"; version="0.1.0"; sha256="0na7jipwzr16afvz2l6wxh62mv0mrq1ma1qwxnys83zhr0dca099"; depends=[Matrix osqp Rcpp]; }; @@ -10469,7 +10908,7 @@ in with self; { isoreader = derive2 { name="isoreader"; version="1.3.0"; sha256="0ghwipdq1pmap1yv7r7ph9gh006j5l6x0k00r6kka07h6j8f66lh"; depends=[dplyr future glue lubridate magrittr progress purrr R_utils readr rlang stringr tibble tidyr tidyselect UNF vctrs]; }; isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; }; isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; }; - isotree = derive2 { name="isotree"; version="0.2.7"; sha256="0xxgwz24sf4simjylvii9dzbw6b5d5wra4y9jwm79srf4yb2lncb"; depends=[Rcereal Rcpp]; }; + isotree = derive2 { name="isotree"; version="0.3.0"; sha256="0ki7ckfij1ky79bwv1j3418dcyb8j9sj00im972wgqp0kr9qpm89"; depends=[Rcpp]; }; ispd = derive2 { name="ispd"; version="0.2"; sha256="06h4z342d17rkpr2wwck4sq79kprdq6fgqf10jg8cs1f52q6pq0h"; depends=[ibd]; }; isqg = derive2 { name="isqg"; version="1.3"; sha256="1988bc5n4b5mgxrfl1774vfgaw7rxm9vlaxnkx26phjzhlr1ix9h"; depends=[BH R6 Rcpp Rdpack]; }; istacr = derive2 { name="istacr"; version="0.1.3"; sha256="14nhd3v8l827mb1fxfhsxklzxbf4316ijp2qkc99qp7ydmxbk0rd"; depends=[curl jsonlite]; }; @@ -10477,6 +10916,7 @@ in with self; { italy = derive2 { name="italy"; version="0.1.0"; sha256="0is90xp6980ja12jzi3816jq1y90ifcw6cvfmybb7invj6rr1cks"; depends=[]; }; itan = derive2 { name="itan"; version="1.0"; sha256="082vh5gvh8hgyhk8nswll16ldhnp0pfpxnz1yx05zsc4nzvm92cf"; depends=[ggplot2 reshape]; }; itcSegment = derive2 { name="itcSegment"; version="0.8"; sha256="032wj34313m3wigdfalq356srdzg0cvnvxnaxwxws6bc44r78izf"; depends=[maptools raster rgeos sp]; }; + itdr = derive2 { name="itdr"; version="1.0"; sha256="1113lr17m370ipg3sxghqvk4fj36bgqs5bfvnli8rss2ffyzfin0"; depends=[MASS]; }; iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; }; itemanalysis = derive2 { name="itemanalysis"; version="1.0"; sha256="1ksbd69mca45jlr2gpars87cf4jfm5rx6sz009sv6a83x831x5rq"; depends=[car ggplot2 polycor]; }; iterLap = derive2 { name="iterLap"; version="1.1-3"; sha256="079d4hxf1ha8pgibzb4r1yk7xqpzndd7hjbp8294qb26jvvcnd8q"; depends=[quadprog randtoolbox]; }; @@ -10484,7 +10924,7 @@ in with self; { iterpc = derive2 { name="iterpc"; version="0.4.2"; sha256="06q7l8mz8ws4nn6gb0whnlqs8my2n8z2d2g8fvv3cxd28904dg9q"; depends=[arrangements gmp iterators]; }; itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; }; itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; }; - itraxR = derive2 { name="itraxR"; version="1.2"; sha256="0dm20d7wvahm24li9yj6x7qs7kbb2pp6bkn1i4bkjmh2jr7ybnid"; depends=[broom chemometrics compositions dplyr ggcorrplot ggfortify ggplot2 janitor readr rlang tibble tidyr tiff]; }; + itraxR = derive2 { name="itraxR"; version="1.4"; sha256="0gybgzc37q1i2zdik1xjn1l6p98jx8r8k722fsgfb17pxj4l4bkf"; depends=[broom compositions dplyr ggcorrplot ggfortify ggplot2 janitor readr rlang stringr tibble tidyr tiff]; }; its_analysis = derive2 { name="its.analysis"; version="1.6.0"; sha256="1ig7yq59y5xl1z182bbvgx8vsqs9sb1xscf6zxqn1qmy9f0ggf7v"; depends=[boot car forecast ggplot2 plyr]; }; itsadug = derive2 { name="itsadug"; version="2.4"; sha256="0759l7hhvj05dp92pz59xwrxjm9s1iwkwrdhs68l0fq57550j70l"; depends=[mgcv plotfunctions]; }; itsmr = derive2 { name="itsmr"; version="1.9"; sha256="0dmijaq6q31irwrjqv5gq1yfbgggwb3m6rwbg4lx1r9l3cqays7i"; depends=[]; }; @@ -10495,27 +10935,28 @@ in with self; { ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; ivitr = derive2 { name="ivitr"; version="0.1.0"; sha256="0fc5svmkxv0s20ipwbvkvmmh1w5gb1g6va496fa9qbf99wifnmrx"; depends=[dplyr nnet randomForest rlang]; }; ivmodel = derive2 { name="ivmodel"; version="1.9.0"; sha256="1yb2k6ciwcfiylnlb9ncz30mz10f73rxqrxk8s099ypr5k6myajk"; depends=[Formula ggplot2 Matrix reshape2]; }; - ivmte = derive2 { name="ivmte"; version="1.2.0"; sha256="19jcydb5n950av2c9j89sakjkq1jbwnarrl0hwmdy573jqh4d8a5"; depends=[Formula]; }; + ivmte = derive2 { name="ivmte"; version="1.4.0"; sha256="1bwvkw04pn4mf7iyfvaiabgx0qd83si13sr9jpqim9zqqhf1c1dc"; depends=[Formula]; }; ivpack = derive2 { name="ivpack"; version="1.2"; sha256="0cr5acjrn41d3q0b77hlg2jmsbf1msvys9gcavm1blsryg2bc03c"; depends=[AER lmtest sandwich]; }; ivpanel = derive2 { name="ivpanel"; version="1.0"; sha256="0irjmkw3nnd8ssidvj23lr0hihlhd9acsbaznh88lknx53ijc2qv"; depends=[Formula]; }; ivprobit = derive2 { name="ivprobit"; version="1.1"; sha256="05b5gf5gmi2yrkg61n7w12qlgpnjakd1z8hhqxy6py8hahsf84gm"; depends=[Formula]; }; - ivreg = derive2 { name="ivreg"; version="0.5-0"; sha256="168ra48blb4wi9f9jqnaz6914s8sz8c147mkhqvim155bd0h4s00"; depends=[car Formula lmtest]; }; + ivreg = derive2 { name="ivreg"; version="0.6-0"; sha256="1lfdha5hmppcx6vajci49jdl8gxg1h70w8wc43hp3anl424l1mvy"; depends=[car Formula lmtest MASS]; }; ivregEX = derive2 { name="ivregEX"; version="1.0"; sha256="0zh3rqvhn8ald6lxv9kywy2v1p0nr9ijv6plhpbxc6k51zzsgyl8"; depends=[AER Formula lmtest sandwich]; }; - ivsacim = derive2 { name="ivsacim"; version="1.1"; sha256="0n5nkl7v8l5lcnnfls03psgsqn5xczka07x381hhyzbsdlxlyi47"; depends=[lava Rcpp survival timereg]; }; + ivsacim = derive2 { name="ivsacim"; version="1.3.1"; sha256="0bd14ydv0pz9yfvr2v1anrgahf4is15mfbdgi8ik96rq9kmlfhk9"; depends=[lava Rcpp survival]; }; ivtools = derive2 { name="ivtools"; version="2.3.0"; sha256="1wv0r9dy893hafbbrjcjrphb8dgql71ya4zfbkl5dfp7d4ncfxl0"; depends=[ahaz data_table nleqslv numDeriv Rcpp survival]; }; ivx = derive2 { name="ivx"; version="1.1.0"; sha256="1dg09aajk9rqmrlwq4xw7qd5ra1z8wjxipy5l85sl1nzii250drq"; depends=[Rcpp RcppArmadillo]; }; jSDM = derive2 { name="jSDM"; version="0.1.0"; sha256="0lkapg6v5lh53vnsg5hcr9qis8qimb6ilds23dqcyhi6w3dys9nb"; depends=[coda corrplot Rcpp RcppArmadillo RcppGSL]; }; + jScore = derive2 { name="jScore"; version="0.1.0"; sha256="0hb63l10cwvpvix155d16v35lp1v88lp69f6q1s09njc6qdsg212"; depends=[]; }; jSonarR = derive2 { name="jSonarR"; version="1.1.1"; sha256="054q3ly471xa64yyz2as6vkr440ip1y8n5wl6s3zbhqy3bqkdqif"; depends=[jsonlite RCurl]; }; - jaatha = derive2 { name="jaatha"; version="3.2.1"; sha256="0zqvylknvymggw5jl40cfyahfjy64wb25f0qymh78xbamv1hc85w"; depends=[assertthat R6]; }; jaccard = derive2 { name="jaccard"; version="0.1.0"; sha256="1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936"; depends=[dplyr magrittr qvalue Rcpp]; }; jack = derive2 { name="jack"; version="1.1.1"; sha256="1mp7cfmh3bzfansb3dyqq347qk6kkf4ndn23pbd78h1xcb54555b"; depends=[DescTools gmp multicool mvp partitions]; }; - jackalope = derive2 { name="jackalope"; version="1.1.2"; sha256="1dk72js7vr98521nscqmajwzp38n52l5gwdzz88fi29wrxvgv4dj"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; + jackalope = derive2 { name="jackalope"; version="1.1.3"; sha256="1cslrl2cvcpi2kisb2plkz8c3wfxkbkf816nnyb06k4mv3gy4r5d"; depends=[ape R6 Rcpp RcppArmadillo RcppProgress Rhtslib zlibbioc]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; jackstrap = derive2 { name="jackstrap"; version="0.1.0"; sha256="09y9pgb920lnbzlgm6j188q8lw1air83kx383a2f89zz7hhgg7jr"; depends=[Benchmarking doParallel dplyr fBasics foreach ggplot2 plyr reshape rlang scales tidyr]; }; - jackstraw = derive2 { name="jackstraw"; version="1.3"; sha256="02qcaf2p0fyni6n2zhd7vp65kniz74di0pf5jzz79jwj15cfd1b0"; depends=[cluster ClusterR corpcor irlba lfa qvalue rsvd]; }; + jackstraw = derive2 { name="jackstraw"; version="1.3.1"; sha256="0l90ayysbmj6gzpzcglpwkpaga067imy6s7hqapmkwiy9kx8gaa1"; depends=[cluster ClusterR corpcor irlba lfa qvalue rsvd]; }; jacpop = derive2 { name="jacpop"; version="0.6"; sha256="0kq6rn33civ2g6i5nwfqvcgmnn5k2dwmw60lkmz4ywm0y4xxlkai"; depends=[]; }; jaggR = derive2 { name="jaggR"; version="0.1.1"; sha256="0qd4kwcc8zcvg2p1njcv7z4y5ssg77zsylph5bcaqdjxq996q7rv"; depends=[formatR glue]; }; - jagsUI = derive2 { name="jagsUI"; version="1.5.1"; sha256="1samj54hyarx9j6k652jl988y3fhxsqg50hfzxdwairg0m2mlgmq"; depends=[coda lattice rjags]; }; + jagsUI = derive2 { name="jagsUI"; version="1.5.2"; sha256="1ig2v5k1xjggh694azr96cv80qapq8al7dhsjhvkx0dihp8kgad2"; depends=[coda rjags]; }; + jalcal = derive2 { name="jalcal"; version="0.1.0"; sha256="19smqrhvab8f2xb8pa8x6gmvr0r2lwvqisfahixs7aa8lxi708jw"; depends=[]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; janitor = derive2 { name="janitor"; version="2.1.0"; sha256="09nqm957m2f54y2l30619b58x4i7gxwvr2lwg5kly5xy1ya1a1nn"; depends=[dplyr lifecycle lubridate magrittr purrr rlang snakecase stringi stringr tidyr tidyselect]; }; @@ -10524,11 +10965,13 @@ in with self; { jcext = derive2 { name="jcext"; version="0.1.1"; sha256="02zppiyq3gy551zi1g00gam1w4y1wgzn5zi9wrcz8yw915dla0ix"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; jcolors = derive2 { name="jcolors"; version="0.0.4"; sha256="18dmjcrci0z1xy2kglrarzm0idr9g3nhbbw7f1ijls3i0piqdri6"; depends=[ggplot2 scales]; }; jcp = derive2 { name="jcp"; version="1.1"; sha256="1b4z1h4ygf39cg870q08ahzi4ccrlrxp6g97y1qiff5pf9xyp1jc"; depends=[]; }; + jds_rmd = derive2 { name="jds.rmd"; version="0.3.0"; sha256="0xrs0xabh0m9ax9praiwj1l7z6mb53q53pqvcgwqw7xld6kkgzh7"; depends=[bookdown rmarkdown]; }; jdx = derive2 { name="jdx"; version="0.1.4"; sha256="0jqf0nkdyv9g4rifzlkls0n64fdcma2yphwl478772jlgfmxm2jb"; depends=[rJava]; }; jeek = derive2 { name="jeek"; version="1.1.1"; sha256="15n0k0i1wwp72g8zqrjmglnckab3p65q3rnpg6d6h8hjcpv82i7g"; depends=[igraph lpSolve pcaPP]; }; jetpack = derive2 { name="jetpack"; version="0.5.0"; sha256="17dixhg5nwv2fhp7gvcc927kfxzj07x288g6ywbba1mphk9j5nam"; depends=[desc docopt remotes renv]; }; jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; }; - jfa = derive2 { name="jfa"; version="0.5.3"; sha256="00dm5higrxgxjnf7vwghvi8f5y5nblzdpml8zbqpi8n0ys3hiqa2"; depends=[]; }; + jfa = derive2 { name="jfa"; version="0.6.0"; sha256="1kcwjdzz31firrdh5kz5h1wyq9faf5k4y3jg5d7gjw0rzzhfw662"; depends=[extraDistr]; }; + jgcricolors = derive2 { name="jgcricolors"; version="1.0.0"; sha256="1lg6yzqly5y2cf396b6rvfqplnfyz9v9ay2g4q9m110mng5ln96l"; depends=[ggplot2 knitr markdown RColorBrewer stringr]; }; jiebaR = derive2 { name="jiebaR"; version="0.11"; sha256="08v64xwr9jp4vh88x7y935khh4cmj8rwsjaxfd2c67n0445qppmd"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; jipApprox = derive2 { name="jipApprox"; version="0.1.3"; sha256="1dgawgvkpswv1mxjlqz4ip7vy2856fqvs24hkfl338jgap60grhp"; depends=[sampling]; }; @@ -10540,17 +10983,18 @@ in with self; { jmetrik = derive2 { name="jmetrik"; version="1.1"; sha256="1if1kxx8apgkbxpkjnlj2lpsfnyj2splsg1p3j5vxa7q6wx70f9j"; depends=[]; }; jmotif = derive2 { name="jmotif"; version="1.1.1"; sha256="0b2qllpfgs6q5fwfhxl5b4xdyzbvnja7ld766akf0xxznxvglkrg"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="2.2"; sha256="1vj9n1hsf780f7l0a22kmi3qm84j4dzjybjkh5zwh6bhwfjnjws3"; depends=[]; }; - jmv = derive2 { name="jmv"; version="1.2.23"; sha256="01c8wln3g9fx0pp4jx2wg6g5qzvs13y8n89rhm6s9yfczq7ljc0p"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; - jmvReadWrite = derive2 { name="jmvReadWrite"; version="0.1.0"; sha256="016qc1dgw21223r8bszh6800lw2srckdvnnzlica9vlj673428h0"; depends=[rjson]; }; - jmvconnect = derive2 { name="jmvconnect"; version="1.2.18"; sha256="1lc9jb98rfrn3rq65l2zgd72qjgg0f6jmk3nxxwd3birkg8mjf9j"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; - jmvcore = derive2 { name="jmvcore"; version="1.2.23"; sha256="1bms2fbcvnacwg4vahj20iz3b6w22xcjz6zyzdihr5ai0318cjz8"; depends=[base64enc jsonlite R6 rlang stringi]; }; + jmv = derive2 { name="jmv"; version="2.0"; sha256="0fhjp3ih46r34yiqxbd2kpwp88nhyrqfwh729l14sj3aw142nlbi"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; + jmvReadWrite = derive2 { name="jmvReadWrite"; version="0.2.2"; sha256="1i9gl79pdr73mkzpqbainsrwa942nvmzmflcy7mcp8lli7xbcpsm"; depends=[rjson]; }; + jmvconnect = derive2 { name="jmvconnect"; version="2.0.0"; sha256="1q412v8z0wbiqab4czabg75w976591lh59gbbhqz1avkas3jjhf2"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; + jmvcore = derive2 { name="jmvcore"; version="1.8"; sha256="00kcb581bs3r291wq365d53lvjqgjpp5krpi3zqbxvdb12d5xdqc"; depends=[base64enc jsonlite R6 rlang stringi]; }; + job = derive2 { name="job"; version="0.3.0"; sha256="0d7pw3q5lqlgmav1vx63y8l6gdav96656bg378wj001rx5gx052h"; depends=[digest rstudioapi]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; - joineR = derive2 { name="joineR"; version="1.2.5"; sha256="07rsxqvy62w2z48fkgbhfk5b3q9qwkmz11n8j8qkhipqs0h1zwwq"; depends=[lattice MASS nlme statmod survival]; }; + joineR = derive2 { name="joineR"; version="1.2.6"; sha256="11pdpivqrbx9zp43yrj52r40n5pql99zhlsazh8pk61zca93gmbm"; depends=[lattice MASS nlme statmod survival]; }; joineRML = derive2 { name="joineRML"; version="0.4.5"; sha256="0rj6ag1qlz1iyia89pkxw8l2aj8msph17g7qkgc3g99v4i9rj2pp"; depends=[cobs doParallel foreach generics ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival tibble]; }; joineRmeta = derive2 { name="joineRmeta"; version="0.1.2"; sha256="0lkj3rry8kvdcl3dxrkvnql8rl3fsgc4lk5qdifhl41aws2q7ccs"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm statmod survival]; }; - joinet = derive2 { name="joinet"; version="0.0.7"; sha256="1av1x5iyiffm6llcxi09zb6q8q08cca9wm7ghd9jgxaqzqc72916"; depends=[cornet glmnet palasso]; }; - joint_Cox = derive2 { name="joint.Cox"; version="3.11"; sha256="0h8s96ng7bfc9y26cl6vc0rz7439zw4siimpmmndhyrsdb6d45dz"; depends=[survival]; }; + joinet = derive2 { name="joinet"; version="0.0.10"; sha256="1jjx1rvg2x9zdfdqsjk04hcn7qsf8g7pq8q0x9q83kd8sb1ikjk5"; depends=[cornet glmnet palasso]; }; + joint_Cox = derive2 { name="joint.Cox"; version="3.14"; sha256="1lc3dmhq2xbhc2vc2dgmww7y4961jvry1im8xvd1nj1m9w2vp0mg"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.4"; sha256="18x6rxaxhz9hcp6rfmjlanbfsc5q61p6xcxixnc8ayyxbdq7q6rf"; depends=[]; }; jointMeanCov = derive2 { name="jointMeanCov"; version="0.1.0"; sha256="1cai5g63n11dirn9fldzkqxcnkxc20ndr9ygrr9rk0s1qz8x63pb"; depends=[glasso]; }; jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; @@ -10559,23 +11003,24 @@ in with self; { jomo = derive2 { name="jomo"; version="2.7-2"; sha256="1sbcpacxnxbzwa8rr9x2bq7hh0s3sw6yznr90dkp43n6xk5xaqir"; depends=[lme4 MASS ordinal survival]; }; jordan = derive2 { name="jordan"; version="1.0-1"; sha256="1d0my0lf8bmlmygz9f23skywzsrhy4xaykyrblbmhb00l0vxpa5s"; depends=[emulator mathjaxr onion]; }; josaplay = derive2 { name="josaplay"; version="0.1.3"; sha256="0q6kjk3mjxwbqvq3zz0ylpi1viznp9pxzngqpjzv5sibv0ndh0lf"; depends=[magrittr utf8]; }; - jose = derive2 { name="jose"; version="1.0"; sha256="1yna3x4hi0vn23dqi605nn1y313brwh2wcv527bm3mdbscgsi2jf"; depends=[jsonlite openssl]; }; + jose = derive2 { name="jose"; version="1.1.0"; sha256="0663n7kbxijy403fj8jd567kq3lv3wzp42fk9ng4dwpn14wdc8j9"; depends=[jsonlite openssl]; }; journalabbr = derive2 { name="journalabbr"; version="0.3.0"; sha256="1q1dmvx4b55bbd2qn920kmi962ignj2h36y7f22bqi5kcgzfgx9d"; depends=[dplyr httr knitr purrr rlang rmarkdown shiny stringi stringr tibble]; }; joyn = derive2 { name="joyn"; version="0.1.3"; sha256="0f6dgcbh7qvk97vyykyncf0nlspjhyppwywx2hk3h9gzh323c7zq"; depends=[cli data_table glue rlang]; }; - jpeg = derive2 { name="jpeg"; version="0.1-8.1"; sha256="1a8mi70x79a691r40yiw684jkg1mr9n8agkxlcksxcnrdybs9c0x"; depends=[]; }; - jpmesh = derive2 { name="jpmesh"; version="2.0.1"; sha256="19dyiprsh1ihm7hx5l885p3whj15dlhrljpr77p8bvyimv94j1nl"; depends=[leaflet magrittr memoise miniUI purrr rlang sf shiny tibble units vctrs]; }; - jqr = derive2 { name="jqr"; version="1.2.0"; sha256="0c5wbi6hv50q6bvbvnzwwj42lm67isi66iwdha4fc9a6w0c9h5vi"; depends=[lazyeval magrittr]; }; + jpeg = derive2 { name="jpeg"; version="0.1-9"; sha256="0wihj538wdnr71wdldym83qadb4kh68a6rkallwbh2f25r27b881"; depends=[]; }; + jpmesh = derive2 { name="jpmesh"; version="2.0.2"; sha256="1rq8xqngizgib5lq60zkpd744f7lf8q69dzhxwlbnhirysnvp1p7"; depends=[leaflet magrittr memoise miniUI purrr rlang sf shiny tibble units vctrs]; }; + jqr = derive2 { name="jqr"; version="1.2.1"; sha256="0ywyy846lpn3bw4v3zh3n33c9g6gc9m99knc78bq3wypcafvhzf7"; depends=[lazyeval magrittr]; }; jquerylib = derive2 { name="jquerylib"; version="0.1.4"; sha256="04a40v4znpj98j7y6009d74a6g9dchj5rr3p08cgz9p3rlfw3g7h"; depends=[htmltools]; }; - jrc = derive2 { name="jrc"; version="0.4.0"; sha256="0jmwjh5zia1q1kma09ngxg2c198a0vy6qhnymcbw8n44lfab25gp"; depends=[httpuv jsonlite mime R_utils R6 stringi stringr]; }; + jrc = derive2 { name="jrc"; version="0.5.0"; sha256="0ab8kks0i5cqj2p15hf9zinj3hdji2nj63j134q26bdf4hdvvza3"; depends=[httpuv jsonlite mime R_utils R6 stringi stringr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrt = derive2 { name="jrt"; version="1.0.1"; sha256="023i0xqz8mhnjnii92vjw64mjnnlf8jaji99i4c2vxcr7m83jm0r"; depends=[directlabels dplyr ggplot2 ggsci irr mirt psych tidyr]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.4.2"; sha256="12x5k3xk4f33jn1czqvh651gf1n255128dihdiqqpj0229gcb138"; depends=[]; }; js = derive2 { name="js"; version="1.2"; sha256="0s5rj845255a4fzv4h76gcnnqyl5cg3c03r2ay3f00jxnxvvigcg"; depends=[V8]; }; jsTree = derive2 { name="jsTree"; version="1.2"; sha256="06mmz55brm6w19vnlk1w8qaz0n3czlyl4fs62nzgdlsdjn8pad1h"; depends=[data_table htmltools htmlwidgets jsonlite]; }; - jsTreeR = derive2 { name="jsTreeR"; version="1.2.0"; sha256="1nvz3q1hhnvqarp1i6h94imknr3h8hfy9bh2aa1vsacd3p1qkp76"; depends=[base64enc htmltools htmlwidgets miniUI R_utils rstudioapi shiny shinyAce]; }; + jsTreeR = derive2 { name="jsTreeR"; version="1.4.0"; sha256="0gvrp7qmjd8qikb0vd72fb43csd7505szjkxghbzbpp65n14z55r"; depends=[base64enc fontawesome htmltools htmlwidgets jquerylib miniUI R_utils rstudioapi shiny shinyAce]; }; jskm = derive2 { name="jskm"; version="0.4.2"; sha256="0yn81fyz8ij2jkys7c5qhfkakqw5nmb458rmd879ns7j7m31nvf0"; depends=[ggplot2 gridExtra scales survey survival]; }; - jsmodule = derive2 { name="jsmodule"; version="1.1.7"; sha256="14hi7n51szbxgxx9bx3z3xaizhbc8iia36r9zh7l0z47f2s1ahqv"; depends=[Cairo data_table devEMF DT epiDisplay geepack GGally ggplot2 ggpubr haven Hmisc jskm jstable labelled MatchIt maxstat pROC purrr RColorBrewer readr readxl rstudioapi see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival tableone timeROC]; }; + jsmodule = derive2 { name="jsmodule"; version="1.1.9"; sha256="1q8b2zjxkfxb5z3w4zvg9azrr98ygw73579hkhia6p96876dkiwi"; depends=[data_table devEMF DT epiDisplay geepack GGally ggplot2 ggpubr haven Hmisc jskm jstable labelled MatchIt maxstat officer pROC purrr RColorBrewer readr readxl rstudioapi rvg see shiny shinycustomloader shinyWidgets survC1 survey survIDINRI survival timeROC]; }; json64 = derive2 { name="json64"; version="0.1.3"; sha256="19q8qgf4wnd3np12ajy180klpjy0g2csw5micwb4sl7qfzl6wc7j"; depends=[jsonlite]; }; + jsonStrings = derive2 { name="jsonStrings"; version="1.0.0"; sha256="1rcgfzcbypmq2fcngl63ik6z13ir1687ya8aww2v8bk56h19pdxa"; depends=[Rcpp]; }; jsonify = derive2 { name="jsonify"; version="1.2.1"; sha256="1kpv6whi6bggi0ij7krzfr0fly6c2j9y54fr5ahgcjp36amr34cj"; depends=[rapidjsonr Rcpp]; }; jsonld = derive2 { name="jsonld"; version="2.2"; sha256="0bplz2s97wl9yp383jazykh5647iw6kbr1zanqai2s0sxp1xbwn8"; depends=[curl jsonlite V8]; }; jsonlite = derive2 { name="jsonlite"; version="1.7.2"; sha256="1lhzcpz9clwq04i5m6jzkvw9x03pwlqrixv4l9xzchjr8d84nd86"; depends=[]; }; @@ -10583,18 +11028,19 @@ in with self; { jsontools = derive2 { name="jsontools"; version="0.1.0"; sha256="13i1g8lmzgs7hd0xay4gm8z2myzbjzi73fwp9x4f4f9mywj7zl5s"; depends=[bit64 DBI glue jsonlite magrittr pillar purrr rlang RSQLite tibble tidyselect vctrs withr]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.1.0"; sha256="1vxklvkva547mzbgi7hll46sfx274c6j4m70algygphz783x3dsx"; depends=[V8]; }; jsr223 = derive2 { name="jsr223"; version="0.3.4"; sha256="0rir9v0qhnbl2rgkx1qz2ydj68ba9ccbdzsg6y1acczdhpl03j51"; depends=[curl jdx R6 rJava]; }; - jstable = derive2 { name="jstable"; version="1.0.2"; sha256="04vdvpgpa7fsp89wrw8bcvxan7i15lahcr15y5fg0b8vrn7glzqd"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; - jstor = derive2 { name="jstor"; version="0.3.9"; sha256="1rfi02i9j5v2zaz1sganp4rn2bm7yadlq0s4fragyy2jpgs0mnnv"; depends=[cli crayon dplyr furrr magrittr pryr purrr readr rlang stringr tibble tidyr xml2]; }; - jti = derive2 { name="jti"; version="0.7.0"; sha256="0mi4y6fbav80sykn6wnqajgldkd5sdb8gaq9ipijjsv1a9ky5y3m"; depends=[igraph Rcpp RcppArmadillo sparta]; }; - jtools = derive2 { name="jtools"; version="2.1.3"; sha256="1plypcx1pcqndbbcn2xxk346fxzikkd8jfgy5jfrwzp467flyj49"; depends=[crayon generics ggplot2 magrittr pander pkgconfig rlang tibble]; }; + jstable = derive2 { name="jstable"; version="1.0.6"; sha256="144s2vw2sv7dvg5n026pbcswgczcrjs8hdz4i6f9kyv2wzigd9r5"; depends=[coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; + jti = derive2 { name="jti"; version="0.8.0"; sha256="15rx44psz5hbpqzlmwnmqzzdf6488n17mbhyh52wyaaa70gk9ndh"; depends=[igraph Rcpp RcppArmadillo sparta]; }; + jtools = derive2 { name="jtools"; version="2.1.4"; sha256="1zbzhr7bz735b8pvqjxhqnmh3sl12xvpz5fpkmjngvwi4yz5873r"; depends=[crayon generics ggplot2 magrittr pander pkgconfig rlang tibble]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; jubilee = derive2 { name="jubilee"; version="0.3.3"; sha256="1j2y44pfx9z2k169lh42b4dnfrrnk8jqsjn3wz4l9iscr6r91lx7"; depends=[data_table dplyr readxl xts yaml zoo]; }; juicr = derive2 { name="juicr"; version="0.1"; sha256="0vkbgbagcgaxj6k62b033ik85jnkzvshg8dm9cz7vq4yjqj3icip"; depends=[RCurl XML]; }; - junctions = derive2 { name="junctions"; version="1.1.1"; sha256="0jg9vnj0gwbgdm3xnpzrhri7r15gwfj5vhcrrm59ssq5pil4hag2"; depends=[Rcpp]; }; - jvcoords = derive2 { name="jvcoords"; version="1.0.2"; sha256="1mlamzg0qz5l23v2w08imrlbnzc3b3amr6yz5hbaf8vc3k3cff5f"; depends=[]; }; + junctions = derive2 { name="junctions"; version="2.0.1"; sha256="19fjh9nf3dp88gdxf6a1f49bann7g21g9rhrqj0fv38wss97cssr"; depends=[nloptr Rcpp RcppParallel tibble]; }; + justifier = derive2 { name="justifier"; version="0.2.2"; sha256="1ww9rdi9khylvr15crkjibdzydlynwscphqyrcpnfig346i9yv72"; depends=[data_tree DiagrammeR DiagrammeRsvg purrr yaml yum]; }; + jvcoords = derive2 { name="jvcoords"; version="1.0.3"; sha256="1ixmz3pj18zddgah59iqd4zbm5praw0dvn6c93dn5mrwx92pa65c"; depends=[]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; + kNNvs = derive2 { name="kNNvs"; version="0.1.0"; sha256="1zbfk8fanwmzn0ryhyxmq7npl1pysgnhs4chpfi1kxlnlbgfxfl1"; depends=[]; }; kSamples = derive2 { name="kSamples"; version="1.2-9"; sha256="1zs22p68d6320kcylisnk0b5wmpapxkyz15py09czxzw7npw8gms"; depends=[SuppDists]; }; - kStatistics = derive2 { name="kStatistics"; version="2.0"; sha256="1mmj8mighaxmh0a2naimyv66iffjfhxh0mzbva7y3cx6bwvsfm83"; depends=[]; }; + kStatistics = derive2 { name="kStatistics"; version="2.1"; sha256="018xlxcykjfi2kagf7jvavry8l7i146rqbnb4lz7ccc5q44schwd"; depends=[]; }; kableExtra = derive2 { name="kableExtra"; version="1.3.4"; sha256="1c5vzy95cbz36jwyssr927qicrayifinv861rvnmg4nghb1gl7q9"; depends=[digest glue htmltools knitr magrittr rmarkdown rstudioapi rvest scales stringr svglite viridisLite webshot xml2]; }; kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; }; kamila = derive2 { name="kamila"; version="0.1.2"; sha256="01rwalv2qigxl3j3jyhrdbxlarwf0xdc8xa6c42sgcl6qpna5vn7"; depends=[abind gtools KernSmooth plyr Rcpp]; }; @@ -10606,6 +11052,8 @@ in with self; { kappalab = derive2 { name="kappalab"; version="0.4-7"; sha256="16bwbwwqmq2w7vy8p3wg0y80wfgc8q5l1ly1mqh51xi240z1qmq0"; depends=[kernlab lpSolve quadprog]; }; kaps = derive2 { name="kaps"; version="1.0.2"; sha256="0jg4smbq51v88i3815icb284j97iam09pc52rv3izxa57nv9a0gz"; depends=[coin Formula survival]; }; karaoke = derive2 { name="karaoke"; version="1.0"; sha256="1kx11lijdffhhh8prjgsamshgg2v29b2i129fjqi079waa335352"; depends=[seewave tuneR]; }; + karel = derive2 { name="karel"; version="0.1.0"; sha256="0ncjzfzm8a6vx2mswvck3j6vnpqhzrjd5gd371xa5cgi0w1figa9"; depends=[dplyr gganimate ggplot2 gifski magrittr purrr tidyr]; }; + katex = derive2 { name="katex"; version="1.3.0"; sha256="07f381ja2pwgnjz9794zc6cg4qzr16zfm116f4dwjghyfblxs3qa"; depends=[V8]; }; kayadata = derive2 { name="kayadata"; version="0.5.1"; sha256="0rpqdbk89q8dmpb5x5kiqwkmq9pbgmg8zs0hi46vlhsy38pbxh7m"; depends=[dplyr forcats ggplot2 magrittr scales stringr tidyr]; }; kazaam = derive2 { name="kazaam"; version="0.1-0"; sha256="0j7vysnmiv9sggcxdn3nrgfvyl52pza4kkjnsa0xlb3fzq9qpwlz"; depends=[pbdMPI]; }; kcirt = derive2 { name="kcirt"; version="0.6.0"; sha256="1gm3c89i5dq7lj8khc12v30j1c0l1gwb4kv24cyy1yw6wg40sjig"; depends=[corpcor mvtnorm snowfall]; }; @@ -10615,16 +11063,17 @@ in with self; { kdecopula = derive2 { name="kdecopula"; version="0.9.2"; sha256="0g5c12wm3byd4chd8i9mxv599gsf4ip4qghx83j3mmhsmn05zf4y"; depends=[lattice locfit qrng quadprog Rcpp RcppArmadillo]; }; kdensity = derive2 { name="kdensity"; version="1.1.0"; sha256="07d1p3ysdm66a9sf0gih5xjb3wfab44c3sr8aaraz22s2a9q9b55"; depends=[assertthat EQL univariateML]; }; kdetrees = derive2 { name="kdetrees"; version="0.1.5"; sha256="1plf2yp2vl3r5znp5j92l6hx1kgj0pzs7ffqgvz2nap5nf1c6rdg"; depends=[ape distory ggplot2]; }; - kdevine = derive2 { name="kdevine"; version="0.4.2"; sha256="15hw27y4rlifz3kyirm7yacca38xqdwr42k21gg67dhmbdplbnz0"; depends=[cctools doParallel foreach kdecopula KernSmooth MASS qrng Rcpp VineCopula]; }; + kdevine = derive2 { name="kdevine"; version="0.4.3"; sha256="1m8bx1bcbq1wz2ww4pjk3cy9in8a5vj4n6asvw9qgyddy7f5iib1"; depends=[cctools doParallel foreach kdecopula KernSmooth MASS qrng Rcpp VineCopula]; }; kdist = derive2 { name="kdist"; version="0.2"; sha256="18q7njvsb9sbm412c6ms4b4nxg768z9qahws5rnin06gvb25nfcx"; depends=[]; }; + kdpee = derive2 { name="kdpee"; version="1.0.0"; sha256="1vrpr1rkk0ypl5yi3cjgw0fglyx9r2fbcq21n172ax0w3kdyflgk"; depends=[checkmate]; }; kedd = derive2 { name="kedd"; version="1.0.3"; sha256="17rwz3yia95xccbxwn43wr6c9b3062094yfahnnnk3wfijyhlxiq"; depends=[]; }; keep = derive2 { name="keep"; version="1.0"; sha256="12803hhrs9v94rv6qaihk1f1ls7lx4cy2pa30v4p1r2z9afx9bjf"; depends=[]; }; kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-2"; sha256="0hjycqga3yjrzpgc911nk64nsjrpim4v7219f7iwi1snx0ydhqzf"; depends=[Bessel]; }; kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.4"; sha256="1mfqblvsn9p6gdcnbypfpzk0xzn6bz1ajbrkz2dap5w35dia3kxa"; depends=[actuar dplyr ggplot2 tibble]; }; kequate = derive2 { name="kequate"; version="1.6.3"; sha256="1ii3wlypm2qqkfxr3z1sdnmgc43h2zzlw6v4h2xxjdlznzxkp3mr"; depends=[equateIRT ltm mirt]; }; - kerTests = derive2 { name="kerTests"; version="0.1.2"; sha256="0gn0wjybaixwv8fkpn6wqz0cywzyscvv2dgnnl3idai1zr1fzjn1"; depends=[]; }; - keras = derive2 { name="keras"; version="2.4.0"; sha256="00bw5f5d81md8db1k6bf2a91by4k25xvlwxiwv188y4vw3bfc7md"; depends=[generics magrittr R6 reticulate rlang tensorflow tfruns zeallot]; }; + kerTests = derive2 { name="kerTests"; version="0.1.3"; sha256="0981q4n4wrv62x4b8jccj5hx58n975rls3sn3s0mz7ajhh1xxbi9"; depends=[]; }; + keras = derive2 { name="keras"; version="2.6.0"; sha256="1pgdcypp9x9dw7aa5ka7qqgd24jdcp3ja94jpm7j6l6j4930k5vd"; depends=[ellipsis generics glue magrittr R6 reticulate rlang tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; kerastuneR = derive2 { name="kerastuneR"; version="0.1.0.3"; sha256="1lky84mgppsbn2wn0livx2j18x5vg92mskhb3pyf4ig9qyfxgjkk"; depends=[crayon data_table dplyr echarts4r keras magick plotly reticulate rjson RJSONIO rstudioapi tensorflow tidyjson]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; @@ -10645,34 +11094,34 @@ in with self; { keypress = derive2 { name="keypress"; version="1.2.0"; sha256="19l33519f726i3q20y34v1aavrn4fpj3zn5caij3l9q2asw2kqk2"; depends=[]; }; keyring = derive2 { name="keyring"; version="1.2.0"; sha256="1rqz29ycsmfqixhnzhhfd89j9ivnmp7x2z3vxdla622zmakbcy4c"; depends=[askpass assertthat filelock openssl R6 rappdirs sodium yaml]; }; keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; }; - keys = derive2 { name="keys"; version="0.1.0"; sha256="0r4qrd9xbc1pwl6dqr89inrlwwfhayymga1mf1nwb47203fbz02l"; depends=[htmltools jsonlite shiny]; }; + keys = derive2 { name="keys"; version="0.1.1"; sha256="0jq7c70hyxpaxkrciy2jz4bf2mdcbcnmpjniwqffk1lkaxr0ni9b"; depends=[htmltools jsonlite shiny]; }; kfda = derive2 { name="kfda"; version="1.0.0"; sha256="0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi"; depends=[kernlab MASS]; }; - kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; + kfigr = derive2 { name="kfigr"; version="1.2.1"; sha256="0kys4j2n2n1v918v877798m34q431fpz0p0s6gxnfqnn26z2hy14"; depends=[knitr]; }; kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; kgrams = derive2 { name="kgrams"; version="0.1.0"; sha256="1p4nbpxv8pklk6i164f6psdldqv8dw6840jjhmapmlw6gqjqy1fh"; depends=[Rcpp RcppProgress Rdpack rlang]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; - khroma = derive2 { name="khroma"; version="1.5.0"; sha256="05qqhj2mqlnidx1l77a806v1ywrb43jnc8p4vz20agjx3k2n9k1i"; depends=[ggplot2 scales spacesXYZ]; }; + khroma = derive2 { name="khroma"; version="1.7.0"; sha256="146kc7mazzznaih9sjqf7cylpxq08lnhijmrapqyhk00f3i6h52n"; depends=[]; }; kibior = derive2 { name="kibior"; version="0.1.1"; sha256="1acrdlqbklhhd69i1gija8r3nsdgcnfvk5ngz7b2ndy2f58w5ynf"; depends=[Biostrings data_table dplyr elastic jsonlite magrittr purrr R6 rio Rsamtools rtracklayer stringr tibble tidyr]; }; kidney_epi = derive2 { name="kidney.epi"; version="1.2.0"; sha256="1hd6w7kxim5slmmqalf5sfjg8jcvhyzn5g4gf6h0lmaprsfszhja"; depends=[]; }; kim = derive2 { name="kim"; version="0.3.13"; sha256="1v09n3rcxcvs1sn492wqxwlvp935vc9rkymbp2rgwqnf8sy3nl23"; depends=[data_table remotes]; }; kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; - kindisperse = derive2 { name="kindisperse"; version="0.9.2"; sha256="1cbpin3h5mipvz028mw6qh0zd33802vk5kc7d13qm541akk9h8i2"; depends=[dplyr fitdistrplus ggplot2 ggrepel here LaplacesDemon magrittr plotly readr rlang shiny shinythemes stringr tibble tidyselect]; }; + kindisperse = derive2 { name="kindisperse"; version="0.10.2"; sha256="0f2i2j1mwk6bwsc42xkkf18nyffp1983bbarwvscjj7saibhfpyj"; depends=[dplyr fitdistrplus ggplot2 ggrepel here LaplacesDemon magrittr plotly readr rlang shiny shinythemes stringr tibble tidyselect]; }; + kinematics = derive2 { name="kinematics"; version="1.0.0"; sha256="1mn09isszg53zxss4q29fiv3ci7y25xsx36cmipk93b7s6p30mhn"; depends=[numDeriv]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; kinship2 = derive2 { name="kinship2"; version="1.8.5"; sha256="1mhnb805l1q5n4nf1gqb0jw8nbpg1yc0l1c61k3zr7mdrjv2dhkj"; depends=[Matrix quadprog]; }; kirby21_base = derive2 { name="kirby21.base"; version="1.7.3"; sha256="1ymhldippxybj6lkh7ibpix68285rdsyw28krjndyzvx39jl78gj"; depends=[git2r]; }; kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.7.0"; sha256="1z2l6bn53mwkll9ki4169lqlz6wcfp29xzdrqyw606j2xrs4wc22"; depends=[kirby21_base]; }; kirby21_t1 = derive2 { name="kirby21.t1"; version="1.7.0"; sha256="0bv8rrk9jh02h3gill1g2w246j4zv98cjchz7i2c092lvqps8szs"; depends=[kirby21_base]; }; kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; - kit = derive2 { name="kit"; version="0.0.7"; sha256="127jl30hxfrd12b6f9n7phr21jk6id0akvdkd4s2p9dpywxqiy5p"; depends=[]; }; + kit = derive2 { name="kit"; version="0.0.9"; sha256="01n4y5n5jzi41wd6ddgswplnc7kjks3449v4da5kizg3ygb14v4n"; depends=[]; }; kitagawa = derive2 { name="kitagawa"; version="3.1.0"; sha256="190xi88zc3vybpyawayh8m78sgcn951n3axmc2fc67sic458r02s"; depends=[Bessel kelvin psd]; }; - kittyR = derive2 { name="kittyR"; version="1.1.0"; sha256="196x631j2zp6892wj609yl16q25zmric8lf8mc760sra4nrps27l"; depends=[beepr dplyr imager magrittr purrr rvest stringr tibble]; }; kiwisR = derive2 { name="kiwisR"; version="0.2.0"; sha256="14fzf72swy221jcbiplss9dh7g03idrpbbyvbxp4bcqpxwr6hbsa"; depends=[dplyr httr jsonlite lubridate purrr tibble]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; klaR = derive2 { name="klaR"; version="0.6-15"; sha256="1bhgkq6spjawy5lsh663rnby4fzrx4k2qwqp4ci4p9pq8g35pzjv"; depends=[combinat MASS questionr]; }; - klassR = derive2 { name="klassR"; version="0.1.5"; sha256="00cm71jcshyndvl1dr59cc01pryjymj6a8lprg8r2i8vpijjb96l"; depends=[httr jsonlite tm]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; - klexdatr = derive2 { name="klexdatr"; version="0.1.1"; sha256="0y951lsafh80x7ya17jw8hmhrcxvqh4qwzik7w42bvams3sbf75k"; depends=[]; }; + kldtools = derive2 { name="kldtools"; version="1.1"; sha256="1nip4vn7bfacl567f79nvafzgc6bzv48z5p02l679hmjf5l9xl9s"; depends=[]; }; + klexdatr = derive2 { name="klexdatr"; version="0.1.2"; sha256="141xs03sb0ixhjpr388fwf5h124mqkbj0k1xqw0whdhrm5051qsz"; depends=[sf]; }; klic = derive2 { name="klic"; version="1.0.4"; sha256="1ggsdq8xcg6hi12rq356myhngx3j475gpwlvpynm1581r4z0lkbk"; depends=[cluster coca Matrix pheatmap RColorBrewer]; }; klsh = derive2 { name="klsh"; version="0.1.0"; sha256="1r354fd5da6mp7v3048ii09hnghhfwdg6pvmx2ib0cr88ql431sy"; depends=[blink plyr Rcpp SnowballC stringi]; }; klustR = derive2 { name="klustR"; version="0.1.0"; sha256="1g2q6h3cbm8v3gqz0f6v8bl5na9972k38d94czjfxmx4cv7wfgx8"; depends=[htmlwidgets jsonlite]; }; @@ -10688,7 +11137,7 @@ in with self; { kmodR = derive2 { name="kmodR"; version="0.1.0"; sha256="1y1pqrrralklflyb1dw8bslfcyqrw8ryijfbhkwba7ykpxcf9fda"; depends=[]; }; knitLatex = derive2 { name="knitLatex"; version="0.9.0"; sha256="1igacc2sx8897wmnhh8kngd0fq6zqbi30chy5c8jw60zc38mi3wi"; depends=[knitr]; }; knitcitations = derive2 { name="knitcitations"; version="1.0.12"; sha256="1c7pl8jh61pv0brqanmyfy6s0ipxn312b2hjypcsjaph6b8mhj2q"; depends=[digest httr RefManageR]; }; - knitr = derive2 { name="knitr"; version="1.33"; sha256="0289dj7h4wppn4xc4ids7xlrfb46gzd1n9r2wpmfc3c818mk70rg"; depends=[evaluate highr markdown stringr xfun yaml]; }; + knitr = derive2 { name="knitr"; version="1.34"; sha256="0p6jdicyqknrqilcjm2h4r6vza5lpzccnsdirj92jb3ljg10b0by"; depends=[evaluate highr stringr xfun yaml]; }; knitrBootstrap = derive2 { name="knitrBootstrap"; version="1.0.2"; sha256="1aj60j7f0gcs120fdrnfbnb7vk7lfn1phil0mghg6a5zldz4cqs3"; depends=[knitr markdown rmarkdown]; }; knitrProgressBar = derive2 { name="knitrProgressBar"; version="1.1.0"; sha256="18v5jrscfrin3mcs63bpj0q1drxk3zkhlbw93sqh0qrq04d4x02v"; depends=[R_oo R6]; }; knitrdata = derive2 { name="knitrdata"; version="0.6.1"; sha256="1am79r4rkrw7vjmyzc0cq4p52l2ypdw99rfhrvdsaq11yllx08mx"; depends=[knitr xfun]; }; @@ -10696,10 +11145,9 @@ in with self; { knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; knnp = derive2 { name="knnp"; version="2.0.0"; sha256="0qgq8la3zndlb1wwqv9b2kw52y9ns36pi4ds68pkm81bhzq5nqis"; depends=[doParallel foreach forecast parallelDist plyr]; }; knockoff = derive2 { name="knockoff"; version="0.3.3"; sha256="1nswpchpk1ccvhlgz1h3ka3c65mjfrrykfgv824fyncmfxaz8lmw"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; - knor = derive2 { name="knor"; version="0.0-7"; sha256="1xxv210sjj9w06pf36q7haz9fkqdc17jyqdsiqsxj3q8zj585qfc"; depends=[Rcpp]; }; knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; }; kntnr = derive2 { name="kntnr"; version="0.4.4"; sha256="1af5qhj82dixf1qcbz3sfj52pzgy8gnafzifwxnhrp7vpn4rnv6m"; depends=[base64enc dplyr httr jsonlite lubridate purrr rlang rstudioapi stringr tibble tidyr]; }; - koRpus = derive2 { name="koRpus"; version="0.13-5"; sha256="176npnsp07crbv22yb795dr6zl2h927sgfr27aks1n9hkbhznayk"; depends=[data_table Matrix sylly]; }; + koRpus = derive2 { name="koRpus"; version="0.13-8"; sha256="0r9a2fzi3w53kixcjzbij8qmmkjl2p53dazys34s0czb5qrlm6hf"; depends=[data_table Matrix sylly]; }; koRpus_lang_en = derive2 { name="koRpus.lang.en"; version="0.1-4"; sha256="1faj065wjj7a68i57y7zmrrj4ckp01gvq8qknf6a56idi8kzr732"; depends=[koRpus sylly_en]; }; kofdata = derive2 { name="kofdata"; version="0.1.5"; sha256="0l0fiamhx4qqqpfafjf8ksnj37q2ynj45b025vvy4q6y286i0w7j"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.3"; sha256="0w0881ydnqdah04sifi25ypzxdwnsiqxfq1xam4yhr670bdak1vm"; depends=[bigmemory]; }; @@ -10707,6 +11155,7 @@ in with self; { kokudosuuchi = derive2 { name="kokudosuuchi"; version="1.0.0"; sha256="0h4r7bd9989pahx34lc2i5h1f8nipir941l7sahhgz28lskfkc3h"; depends=[glue rlang sf stringr tibble]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komaletter = derive2 { name="komaletter"; version="0.4.2"; sha256="1cll8cb69gyxl5mg04jibxf7szh38xrqksjkcswbgjcqidp6yxi2"; depends=[rmarkdown]; }; + konfound = derive2 { name="konfound"; version="0.4.0"; sha256="14d8a1ngrf24gbxfg8c8h4svjvsjc3gflcnzxza17xv2rcgzygnr"; depends=[broom broom_mixed crayon dplyr ggplot2 mice purrr rlang tibble tidyr]; }; kosel = derive2 { name="kosel"; version="0.0.1"; sha256="1gdsy4i58byqxddpsm5nk1r3hlgik5gs2b8jqcm8n1r4ib6pg0ay"; depends=[glmnet ordinalNet]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; kpeaks = derive2 { name="kpeaks"; version="1.1.0"; sha256="057xfqn08lqczgrj1r63d7vbncg24x9va9lnk8c47nwzl1x8aphd"; depends=[]; }; @@ -10717,7 +11166,7 @@ in with self; { kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; krippendorffsalpha = derive2 { name="krippendorffsalpha"; version="1.1"; sha256="0d06rwg3ab383x4194n5s50n5nc6ns16jhcfn8kzzcj7j9swz5kl"; depends=[]; }; krm = derive2 { name="krm"; version="2020.5-20"; sha256="1b6477cjv5k30djvrlbmwn91ghgwk24cfd58cb0q80xqhgiqvrzb"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.12.0"; sha256="1sff6rlpq64lqyvwgral9zbcan30wpgmfb26hw9y6wzypd9gxbz6"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm plot3D]; }; + ks = derive2 { name="ks"; version="1.13.2"; sha256="02gnpyjqdlj6dl2x9i7mmks4f5nrh85j3h0kfa0v1v6wi8blx7kw"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm plot3D pracma]; }; ksNN = derive2 { name="ksNN"; version="0.1.2"; sha256="06x471hck95xqy7rbh53ibhzh6kfjra7y9ipqdj2rqdkmfdj72q8"; depends=[Rcpp]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksharp = derive2 { name="ksharp"; version="0.1.0.1"; sha256="1dnkj838y8c1b53mlljhjqs3nd864i9xcqsv9n4fw28b4br9m570"; depends=[]; }; @@ -10727,13 +11176,12 @@ in with self; { kstMatrix = derive2 { name="kstMatrix"; version="0.1-2"; sha256="1z5gs0x80dq549mba2sy1nfhsphrpkrydalj2jiwqb7fmwqknm3r"; depends=[]; }; ktaucenters = derive2 { name="ktaucenters"; version="0.1.0"; sha256="15ddjr4c90b5hc4977gk35zb2kswrcvai3xighy7qj6g9lgiszgf"; depends=[dbscan dplyr GSE MASS]; }; ktsolve = derive2 { name="ktsolve"; version="1.3"; sha256="0brxqb60m1lyqhsmds1c3c6cmbcxlzk2nwvi0fhkc8ziwzlfmd09"; depends=[BB nleqslv]; }; - kubik = derive2 { name="kubik"; version="0.3.0"; sha256="1m1ll3bb77h1x9m5q784m3dw061ysjmfb62q4svc1nvassbw44vf"; depends=[]; }; kuiper_2samp = derive2 { name="kuiper.2samp"; version="1.0"; sha256="0gcgayh7qdic9zprdvs6r8qvpqs467zrm0qzp2acb7alcp01jhpi"; depends=[]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; kutils = derive2 { name="kutils"; version="1.70"; sha256="06jk66wbq3jmdf2jdhqns6r3yk36l2x7c907x977zv80sqxa1l37"; depends=[foreign openxlsx plyr RUnit xtable]; }; kvh = derive2 { name="kvh"; version="1.4.1"; sha256="0hnqlybphx8qnx98ynykxpz4ys4prp9zbmkak02qlvmnxwc2cqg0"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.3.0"; sha256="1rlm7i95yw66asgkag93phig2y9lic4xl2fv3cbnr3v751f6a59m"; depends=[hydroGOF lattice]; }; - kyotil = derive2 { name="kyotil"; version="2020.10-12"; sha256="1dqh753fcjdrj81rpaf1jc4wgd0svm7y9j5yq76iyd2q8pp1q2y1"; depends=[]; }; + kyotil = derive2 { name="kyotil"; version="2021.5-14"; sha256="1wimyjh78w3bimijr8ym0642kdag4zryildyx3v1p37cjy8788b9"; depends=[]; }; kza = derive2 { name="kza"; version="4.1.0.1"; sha256="1vx7wc8iwmr9d6ff2kcy6y3nyfj6jfzv4hxkv1fsas0rbjgfick4"; depends=[]; }; kzfs = derive2 { name="kzfs"; version="1.5.0.2"; sha256="0x0fc807p0pwsjkhjq51ymwr9nhs6cb0m82029cz8bbn3yf6cymq"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; @@ -10747,7 +11195,6 @@ in with self; { labdsv = derive2 { name="labdsv"; version="2.0-1"; sha256="099rzl9hy70rmb5fg0vx26mlhr4ra2s0hl3jgv22s8hqpvlmakas"; depends=[cluster MASS mgcv Rtsne]; }; label_switching = derive2 { name="label.switching"; version="1.8"; sha256="0xwwhn249aibip12yxjwlrpyqj6zvc95zc7n9jf2vjjpashyc3yk"; depends=[combinat lpSolve]; }; labelVector = derive2 { name="labelVector"; version="0.1.1"; sha256="156066jbsmqal1q4xwwkyrqfzq0as6r2add0x240y21zak6i8x9q"; depends=[]; }; - labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.4.2"; sha256="0rfikd9gy70b8qz87q9axcwv8nmn9mbxfdwypxi0sghpfs9df8p0"; depends=[]; }; labelled = derive2 { name="labelled"; version="2.8.0"; sha256="0fs8fhmk9j2nv2j87mpkmm0clz34f8kybnzn6pzqpcbwk0i2pcwg"; depends=[dplyr haven lifecycle rlang stringr tidyr vctrs]; }; labelmachine = derive2 { name="labelmachine"; version="1.0.0"; sha256="18l7argmf7d60cv34w7acjg4bk08nhi2cc5p61sx2zmq28v8nndr"; depends=[yaml]; }; @@ -10764,54 +11211,56 @@ in with self; { laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; lagged = derive2 { name="lagged"; version="0.3-0"; sha256="0bm3d6pgb25rw1njarki60j4d7mx7rni25a21iw1l650slg7sscm"; depends=[]; }; lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-1"; sha256="1v3a580scxb1v5na3ab3ax9qlzbnay7nhm3ln5l8f9zgsqrg5lyh"; depends=[Formula partykit spatialreg]; }; - lakemorpho = derive2 { name="lakemorpho"; version="1.1.1"; sha256="0asrp9rvyi5ykxw922qx25rgxvyc9mh4sc7qkbpwzqw8xvgpad2z"; depends=[cluster geosphere raster rgdal rgeos sp]; }; + lakemorpho = derive2 { name="lakemorpho"; version="1.2.0"; sha256="0fcmrl6yi1dd0i1r4kyp8bf4yw1nwdk6862sdakfwr2jd1rxhi9q"; depends=[cluster geosphere raster rgdal rgeos sp]; }; laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; }; - lamW = derive2 { name="lamW"; version="2.0.0"; sha256="03aisn5qmhia61glm1lrcjxj73qp4qfhn6nc964gpnl5h9nwzhnw"; depends=[Rcpp RcppParallel]; }; + lamW = derive2 { name="lamW"; version="2.1.0"; sha256="09f93gf9q3bxa2a2g5kgzc69s6izn8z243160280vbqzsy55m28q"; depends=[Rcpp RcppParallel]; }; lambda_r = derive2 { name="lambda.r"; version="1.2.4"; sha256="1mh1g0gsd58gng0hb29vww2yqb2jfs07kba5kxnnqck5j3izwlnj"; depends=[formatR]; }; lambdaTS = derive2 { name="lambdaTS"; version="1.0.0"; sha256="0bd1kvvw573vagx7k2nylawgaf826bvqms4ar56cx54hys0blmm5"; depends=[abind bestNormalize bizdays fANCOVA ggplot2 imputeTS lubridate modeest narray purrr readr scales stringr tictoc torch]; }; lamme = derive2 { name="lamme"; version="0.0.1"; sha256="1x9jl79iqikpjixajly1k8w2nkzskns2m0v242giknl0ikw298h1"; depends=[]; }; landest = derive2 { name="landest"; version="1.0"; sha256="1lp5sfqk0n7i23fmwjgzsabml1fsji1h9xq5khxzaz1bzqv1s08g"; depends=[survival]; }; - landmap = derive2 { name="landmap"; version="0.0.9"; sha256="1dvzh9nxq47ygv1zyrzzmwdc92c36gmqdh1ciksq7bljpf7h6xq3"; depends=[forestError gdalUtils glmnet matrixStats meteo mlr parallelMap ranger raster rgdal sp]; }; + landmap = derive2 { name="landmap"; version="0.0.11"; sha256="1kqm1cnh3dsllqg2ya50355977j6b4pqw3cc863l074cr7faa6k3"; depends=[forestError gdalUtils glmnet matrixStats mlr parallelMap ranger raster rgdal sp]; }; landpred = derive2 { name="landpred"; version="1.0"; sha256="1bl17xkx18i8i7arccnjmxvhjn4yiy7w64hg4n0xmhk8pg0l3mrg"; depends=[survival]; }; landsat = derive2 { name="landsat"; version="1.1.0"; sha256="15ymmwhkgw0lqyy2sryss3nsmkrjf4cc0bzlsr41vh5c2636srfd"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; - landscapemetrics = derive2 { name="landscapemetrics"; version="1.5.2"; sha256="14cj9g2w9k3zjz1kl1crv84iy85knbbykfirw69gm8h2cfavdpnb"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; + landscapemetrics = derive2 { name="landscapemetrics"; version="1.5.4"; sha256="1qsm0h6lcg4a7s6g1am305rcxbrrf2hb6ypd29g5k7kj80fwg1rl"; depends=[cli ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; landscapetools = derive2 { name="landscapetools"; version="0.5.0"; sha256="11zp6r414nkj8vhsbryzhkxmpal2bva8msaxf1v69xax70ilxyf1"; depends=[ggplot2 raster Rcpp tibble]; }; - landsepi = derive2 { name="landsepi"; version="1.0.2"; sha256="0pyajgl9zy5s3yb7lvj0dmjbk2li4bacidqv7m1jdgfgqwdjrs0n"; depends=[DBI doParallel fields foreach Matrix mvtnorm Rcpp RSQLite sf sp splancs testthat]; }; + landsepi = derive2 { name="landsepi"; version="1.1.0"; sha256="06brlb97ygrbp940y5vlxdanwrx3cbavhjwcb9nw69m115xkagcx"; depends=[DBI doParallel fields foreach Matrix mvtnorm Rcpp RSQLite sf sp splancs testthat]; }; languageR = derive2 { name="languageR"; version="1.5.0"; sha256="1iipnr2b4hd2w718prbh075j56m5xnchlcb2vg26m16qpydp6afn"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.4"; sha256="1q82shdcdd84nr6bnfwgyyb81z8dycvj1i3vhwvdg710s15rgiyk"; depends=[attempt curl httr jsonlite]; }; - languageserver = derive2 { name="languageserver"; version="0.3.10"; sha256="1m8hwqcznxyjj1kpl4nrw1nd4bilz0vk0vzz48qazwaj9qih18wj"; depends=[callr collections desc fs jsonlite lintr R6 repr roxygen2 stringi styler xml2 xmlparsedata]; }; + languageserver = derive2 { name="languageserver"; version="0.3.11"; sha256="1yy1a4zbqb038rz94zywdkfa5i0lq09a35n3mkdcmgv97w6wxvl7"; depends=[callr collections desc fs jsonlite lintr R6 repr roxygen2 stringi styler xml2 xmlparsedata]; }; languageserversetup = derive2 { name="languageserversetup"; version="0.1.2"; sha256="05i8kcp1zpbkrqpq5vxxvxk9p7phyngxl0q6v76va0i7qnmy1v7a"; depends=[]; }; lans2r = derive2 { name="lans2r"; version="1.1.0"; sha256="0svqaz1j8vhfnm31bfp4gqshdj73wmljva4kxcv2qajmcdiqbd2s"; depends=[dplyr ggplot2 R_matlab reshape2 rlang tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; + lares = derive2 { name="lares"; version="5.0.2"; sha256="0lrw1mw6qwhv7mcpr42gwjrafjv7il5wk0js8gqn440qgjlywm28"; depends=[dplyr ggplot2 h2o httr jsonlite lubridate magrittr openxlsx patchwork pROC rlang rpart rpart_plot rvest stringr tidyr yaml]; }; largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; }; lars = derive2 { name="lars"; version="1.2"; sha256="0blj44wqrx6lmym1m9v6wkz8zxzbjax2zl6swgdczci0ixb5nx34"; depends=[]; }; - lass0 = derive2 { name="lass0"; version="1.1.0"; sha256="01fafgyhi3fw8ldjw2gf0z9w1si7il3ailwm197fxmw4wqgys9fl"; depends=[doRNG foreach ismev lpSolve]; }; lasso2 = derive2 { name="lasso2"; version="1.2-21.1"; sha256="0pp92n6db21q7ifykqjy19pcscrbbwgz5p57zdk2acrnsjf49j47"; depends=[]; }; lassopv = derive2 { name="lassopv"; version="0.2.0"; sha256="0yawnjw063jypk3riy9xab9cmliv6c9dnabi18670khd3gzb2r9z"; depends=[lars]; }; lassoscore = derive2 { name="lassoscore"; version="0.6"; sha256="1i3i07da8sw9w47rcflhylz8zxvzkyycbc1a4gf6hbcpp21rqd7d"; depends=[glasso glmnet Matrix]; }; lassoshooting = derive2 { name="lassoshooting"; version="0.1.5-1"; sha256="0ixjw8akplcfbzwyry9p4bhbcm128yghz2bjf9yr8np6qrn5ym22"; depends=[]; }; latdiag = derive2 { name="latdiag"; version="0.3"; sha256="13wk8vhiwr9drcx5f4wlgbin6hc83zv54yr4h3qhjagm3hxcxbw0"; depends=[Rdpack]; }; + latentcor = derive2 { name="latentcor"; version="1.0.0"; sha256="1d2wdf31aq1cyl601hqi4h266y3y97xsw77jgknmiwb2cd0655mh"; depends=[chebpol doFuture doRNG fMultivar foreach future ggplot2 heatmaply MASS Matrix microbenchmark mnormt pcaPP plotly rmarkdown]; }; latentgraph = derive2 { name="latentgraph"; version="1.1"; sha256="11h7nrd81licvdikiwwfkz4x9i7drz09w5ns672b7fw0pj4qqgsr"; depends=[glmnet MASS pracma Rcpp RcppArmadillo]; }; latentnet = derive2 { name="latentnet"; version="2.10.5"; sha256="05yjf7a16imv1p2lg5dmfk183xll49crnkg0mbz4c4b39nksy85v"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; - later = derive2 { name="later"; version="1.2.0"; sha256="00f4n1b2ykrs2cd61pypa4d00ydx9hqq2c1a1p8psa2yym6979bm"; depends=[Rcpp rlang]; }; + later = derive2 { name="later"; version="1.3.0"; sha256="0acqg29hcm2iq1418b54np7zb5pnr3xzrwc3ijv2pz9wra10ix88"; depends=[Rcpp rlang]; }; latex2exp = derive2 { name="latex2exp"; version="0.5.0"; sha256="0qknpw7zwwbzsbry94j8fn48mq7kq5rc5448g9hybbisain3wfvg"; depends=[magrittr stringr]; }; latexdiffr = derive2 { name="latexdiffr"; version="0.1.0"; sha256="021lhswy8nik2h1951h1affg8x5lchsa2amyx7fwrajp4bgq72yk"; depends=[fs rprojroot]; }; - latexpdf = derive2 { name="latexpdf"; version="0.1.6"; sha256="07g33z5lyxinlrzpk6pd41m4c4bbfql611yqcqxasf8wra9bb0jr"; depends=[]; }; + latexpdf = derive2 { name="latexpdf"; version="0.1.7"; sha256="0n0hzr9jkg13kn56jcghcg4a6y8x0c3jffcvxv621azd9ldljgfl"; depends=[]; }; latrend = derive2 { name="latrend"; version="1.1.2"; sha256="1g4dv648wfczjkncqrrzr2qzsjj93w6c4lsa3hivddpi9vbbl19w"; depends=[assertthat caret clusterCrit data_table foreach ggplot2 lme4 longitudinalData magrittr matrixStats mclust mclustcomp plyr R_utils Rdpack scales stackoverflow]; }; latte = derive2 { name="latte"; version="0.2.1"; sha256="1dcwxxj3yran5a3a8vvdfmx4ap69ql2jncxvmci4p4vcw4ki9j9g"; depends=[dplyr ggplot2 glue magrittr memoise mpoly stringr usethis]; }; - lattice = derive2 { name="lattice"; version="0.20-44"; sha256="16yvdklwgjfclayh15axknjwzygx8i7y8zl5mlw8m85dqzihifap"; depends=[]; }; + lattice = derive2 { name="lattice"; version="0.20-45"; sha256="1b87fmyjzbg854vpi03my1p25n3d0bchhwsdm2frblxppn98sf12"; depends=[]; }; latticeDensity = derive2 { name="latticeDensity"; version="1.2.6"; sha256="0l9ypdpy09nnmanj2gvaxzj79s8d9iqwy6rv0rig5fwbqv1y6135"; depends=[sf sp spam spatialreg spatstat spatstat_geom spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-29"; sha256="04fzwcqs594rk5qp98yilh3kdh3sw4xf8wld5rp94ggpaqfw7bbc"; depends=[jpeg lattice png RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.6.9"; sha256="07difbrz8zmvdyns63958v0zw4hyv48956mcww8zh7064a564k83"; depends=[numDeriv SQUAREM survival]; }; + lava = derive2 { name="lava"; version="1.6.10"; sha256="0bi3c1aqwlq7jbz4raz6vga4r264w7lldi0i62xjlbl7hnlgi23s"; depends=[future_apply numDeriv progressr SQUAREM survival]; }; lavaSearch2 = derive2 { name="lavaSearch2"; version="1.5.6"; sha256="0m5dwfmpcmicrpasx2raac2zylss416bxxgb3mg3abpll89iw9fx"; depends=[doParallel ggplot2 lava MASS Matrix multcomp mvtnorm nlme Rcpp RcppArmadillo reshape2 sandwich]; }; - lavaan = derive2 { name="lavaan"; version="0.6-8"; sha256="18l49f1v7nrngwra4v983ic8w1d4w23ws8xf36337dq0j6809qj0"; depends=[MASS mnormt numDeriv pbivnorm]; }; + lavaan = derive2 { name="lavaan"; version="0.6-9"; sha256="12hhbwxaiprs9bmclwhhdpv42h4mrl4gj92zq3wk8rb883mw816l"; depends=[MASS mnormt numDeriv pbivnorm]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; - lavacreg = derive2 { name="lavacreg"; version="0.1-1"; sha256="0w9p6crg81npzfyg306lx5rn79722ja5kz65qyglc1x2lfag0w3m"; depends=[fastGHQuad pracma Rcpp]; }; + lavaanPlot = derive2 { name="lavaanPlot"; version="0.6.2"; sha256="03icyydr6sv4jkdfdjchsdrscr9lz9q74x5q17cx2iw3383j6lz5"; depends=[DiagrammeR lavaan magrittr stringr]; }; + lavacreg = derive2 { name="lavacreg"; version="0.1-2"; sha256="15108y1bxlimcc57c4655wgll23s9dk8zj3j2sqg7rnn3i9kbjc6"; depends=[fastGHQuad pracma Rcpp SparseGrid]; }; lawstat = derive2 { name="lawstat"; version="3.4"; sha256="1zrx5lsqfxlqjr68iz9hqghsla4m25hn5lyf8jwhw5229sw0n7a1"; depends=[Kendall mvtnorm Rdpack]; }; - lax = derive2 { name="lax"; version="1.1.0"; sha256="0awk5qg339fvx7vdln0xzc1yz8h0dxgq7ypbmak41ddfqkyjhf9a"; depends=[chandwich numDeriv revdbayes sandwich]; }; + lax = derive2 { name="lax"; version="1.2.0"; sha256="0v05088a3hfmb2m6mzc6m7nibiq4qs5j052pnigyqkadf8mcyvjq"; depends=[chandwich numDeriv revdbayes sandwich]; }; lazy = derive2 { name="lazy"; version="1.2-16"; sha256="1psh3sng1pm23pjwy7iszb21ys7d29ry34ymvpgxj6zdhywwi5n7"; depends=[]; }; lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; }; lazyWeave = derive2 { name="lazyWeave"; version="3.0.2"; sha256="1a7l0rgkp3xq2s6bikciq778fwyr282baa6jk9ip4a71s931p2ag"; depends=[Hmisc labelVector]; }; @@ -10822,18 +11271,18 @@ in with self; { lazyraster = derive2 { name="lazyraster"; version="0.5.0"; sha256="0zf9xlxyzmgxy1nl2kg7fvpfamjz04gf4yxjn3r9j7fjkik35cnp"; depends=[quadmesh raster vapour]; }; lazysf = derive2 { name="lazysf"; version="0.1.0"; sha256="19g0qzm0dxsa8m4dj4zmz8r674dw43pqs5gg6n3xfgm5dl9772jb"; depends=[DBI dbplyr dplyr magrittr sf tibble]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; - lazytrade = derive2 { name="lazytrade"; version="0.5.1"; sha256="1q3l4p277qmg95rvd0bajbnkj9nibvffhkcvpcj7v4hy2rjvfvib"; depends=[cluster dplyr ggplot2 h2o lifecycle lubridate openssl readr ReinforcementLearning stringr]; }; + lazytrade = derive2 { name="lazytrade"; version="0.5.2"; sha256="0yjqnv4a8fprg7mjpql4jrz98bbmxk0jjn7h9jpb08b79j03vk3y"; depends=[cluster dplyr ggplot2 h2o lifecycle lubridate openssl readr ReinforcementLearning stringr tibble]; }; lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3c = derive2 { name="lbfgsb3c"; version="2020-3.2"; sha256="07mhiaxhjjma5c65z3pz7wchgsqn4b19labzyq25ncnmj319fxrg"; depends=[numDeriv Rcpp RcppArmadillo]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; lbreg = derive2 { name="lbreg"; version="1.3"; sha256="1z9vixf6sl0k9lizngc3859lk32srkk1d8y133sl6s37ppmqb4s2"; depends=[MASS]; }; - lcars = derive2 { name="lcars"; version="0.3.6"; sha256="008dw30x4la3l2lq520c55sxfr4pflx3ii4xrkafrq17pndx3hmy"; depends=[ggplot2 shiny trekcolors]; }; + lcars = derive2 { name="lcars"; version="0.3.7"; sha256="1hjlcl57aazcm5hgjiwmi116rk13z2gr65mpgcvyc0p9xih8bvdf"; depends=[ggplot2 shiny trekcolors]; }; lcc = derive2 { name="lcc"; version="1.1.2"; sha256="0kcaws22hzvvm6pgkzg27fzwc2avizk3330sjxa5004haw06pq7d"; depends=[doRNG doSNOW foreach ggplot2 hnp nlme]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; lchemix = derive2 { name="lchemix"; version="0.1.0"; sha256="1g2w57fi6kvsyir14hnxh0v6xwjdnbisafvjxvn1g6a4h55dg9i0"; depends=[MCMCpack mvtnorm]; }; lclGWAS = derive2 { name="lclGWAS"; version="1.0.3"; sha256="03b6ijqvyirv96hc3dsqf4f0zzqlmq5451mcb14d2mw3s6xy1vmq"; depends=[BH Rcpp]; }; - lcmm = derive2 { name="lcmm"; version="1.9.2"; sha256="0w58w7f7l51jc56n6vd3xsfr4c2hfd7qzgw328vppcm1ncq2g8mn"; depends=[survival]; }; + lcmm = derive2 { name="lcmm"; version="1.9.3"; sha256="0r2wx28yky3x23f2pjgfnibwba59y633c13fw7qcn2n3n5q3yzwl"; depends=[mvtnorm survival]; }; lconnect = derive2 { name="lconnect"; version="0.1.1"; sha256="1lx0z72aiy2hbh0wxn3ni3dyr3s2v8xirkvszlxvgfzkfmjx05j5"; depends=[igraph sf]; }; lcopula = derive2 { name="lcopula"; version="1.0.4"; sha256="11rjymm4zj3brifzrrfwqv9v8rzkzqk072xlzyjxm2p08dd11xxb"; depends=[copula pcaPP Rcpp]; }; lcpm = derive2 { name="lcpm"; version="0.1.1"; sha256="0pqmizli5rhyaxvxrjycf8d5kqrm23i3vdz00r8zmijjpiz2p9s2"; depends=[Matrix numDeriv plyr]; }; @@ -10842,34 +11291,35 @@ in with self; { lctools = derive2 { name="lctools"; version="0.2-8"; sha256="03k6d78lzc8jxndnwh39h6fagr6ibhr9354vzvsw873912sxs8c9"; depends=[MASS pscl reshape sp weights]; }; lcyanalysis = derive2 { name="lcyanalysis"; version="1.0.4"; sha256="0pwr6r8nbvmppqwd9gxap6v49l7iaq5syaq11spxp5yc2h3pa2rg"; depends=[quantmod TTR xts zoo]; }; lda = derive2 { name="lda"; version="1.4.2"; sha256="03r4h5kgr8mfy44p66mfj5bp4k00g8zh4a1mhn46jw14pkhs21jn"; depends=[]; }; - ldaPrototype = derive2 { name="ldaPrototype"; version="0.3.0"; sha256="1789wvl3c7h4as3sy1lkraqbhvnzcmcncyva7mjjh4p3vsgi1zdd"; depends=[batchtools checkmate colorspace data_table dendextend fs future lda parallelMap progress]; }; - ldamatch = derive2 { name="ldamatch"; version="1.0.1"; sha256="1dmmjw7h0rrgwga7235bryzzvmx68gmkpy5v1pwvnkk4rxp8xamh"; depends=[car data_table entropy foreach gmp iterators iterpc kSamples MASS RUnit]; }; + ldaPrototype = derive2 { name="ldaPrototype"; version="0.3.1"; sha256="1gnwss71488837ry9zhri7yv68hhnrckrn8qb1b8sszvsch5apan"; depends=[batchtools checkmate colorspace data_table dendextend fs future lda parallelMap progress]; }; + ldamatch = derive2 { name="ldamatch"; version="1.0.2"; sha256="1nzl9pf223z2nwpaw5721qw8p1va70avpjwj1myv9q054zaspmgb"; depends=[car data_table entropy foreach gmp iterators iterpc kSamples RUnit]; }; ldat = derive2 { name="ldat"; version="0.3.3"; sha256="1n8v4nzfv3ayr46ahrz60vasam8mx1phb4vss05d9xh7sxlkx7gv"; depends=[BH lvec Rcpp]; }; ldatuning = derive2 { name="ldatuning"; version="1.0.2"; sha256="0367y6k5i4sccwfcm89xyc62qblrlwnm6hsa2jf346rnrfz9hkkc"; depends=[ggplot2 reshape2 Rmpfr scales slam topicmodels]; }; ldbod = derive2 { name="ldbod"; version="0.1.2"; sha256="1ylzkswnhf4jnjx2ijasy49pj78ffx333za0bx2fnf3g85kicqiv"; depends=[mnormt RANN]; }; ldbounds = derive2 { name="ldbounds"; version="1.1-1.1"; sha256="10rmkidvvhwnrkc62c5ld44xhbvx1k8mch28h1yryakn8gznp3p8"; depends=[lattice]; }; ldhmm = derive2 { name="ldhmm"; version="0.5.1"; sha256="1jwgxwzz56n6hhpp1qks1x0jsfbrjgfsl6h5sp7498l4d2f279ij"; depends=[ecd ggplot2 moments optimx scales xts zoo]; }; - ldsep = derive2 { name="ldsep"; version="2.0.2"; sha256="1i8mw7rwk9hcx8f6y27c8lab8sv78hnksxnb0yhqcdrn7knvgyy1"; depends=[abind ashr corrplot doParallel foreach lpSolve matrixStats modeest Rcpp RcppArmadillo]; }; + ldsep = derive2 { name="ldsep"; version="2.1.2"; sha256="1kpqmwphkhw9l2s8mz4s6mjfjlysivpzqvhpncw5nphhgdqd22j6"; depends=[abind ashr corrplot doParallel foreach lpSolve matrixStats modeest Rcpp RcppArmadillo]; }; ldsr = derive2 { name="ldsr"; version="0.0.2"; sha256="0wmxpglad1mk2c1gi9kxmh149r8ad0l8i2xlfs1hdjb6a4wxsklr"; depends=[data_table foreach MASS Rcpp RcppArmadillo]; }; leabRa = derive2 { name="leabRa"; version="0.1.0"; sha256="08yiwyfg9bp4i9w5yyw9p63wyvgj39kd64y3h21j2jmpw8zxncdq"; depends=[plyr R6]; }; leaderCluster = derive2 { name="leaderCluster"; version="1.2"; sha256="1lqhckarqffm2l3ynji53a4hrfn0x7zab7znddia76r2h6nr02zb"; depends=[]; }; + leafR = derive2 { name="leafR"; version="0.3.5"; sha256="02kimgffynf7nx164g1vw30wcv2plr7a5gf27q4x87c9c8b0cb1b"; depends=[data_table lidR raster sp]; }; leafSTAR = derive2 { name="leafSTAR"; version="1.0"; sha256="16zfaj0v6dx6mhy6m126lxa6w0dzfw4acm83jlbrizaz52amhv6a"; depends=[]; }; leafdown = derive2 { name="leafdown"; version="1.0.0"; sha256="1zvgbglrb4javazvyph7b48x3qab7kiziiya1a1wccdm9l6qh58w"; depends=[checkmate leaflet magrittr R6 shiny shinyjs]; }; - leafem = derive2 { name="leafem"; version="0.1.3"; sha256="017kcyyvcf8v9dvvw2zyrwjwjpdgnzih64602z9qbnzsbv0ky4kg"; depends=[base64enc htmltools htmlwidgets leaflet png raster sf]; }; + leafem = derive2 { name="leafem"; version="0.1.6"; sha256="0ml110rva6ca8ycy0mrivq3wsj0dvyi5f62i92948r7mk6kf0l6a"; depends=[base64enc geojsonsf htmltools htmlwidgets leaflet png raster sf]; }; leafgl = derive2 { name="leafgl"; version="0.1.1"; sha256="042jps6zh4xr0xj19a7fbgrcb6q6gsw2q5f191lyskr8iajdrz1h"; depends=[geojsonsf htmltools jsonify leaflet sf]; }; - leaflegend = derive2 { name="leaflegend"; version="0.2.0"; sha256="1h96ksj5y88ns3nnj4wpdiglqxdydkzdd5215lw31aiq2f0zim7f"; depends=[base64enc htmltools knitr leaflet]; }; + leaflegend = derive2 { name="leaflegend"; version="0.4.0"; sha256="1qijjkh2vga6ip77hbkwh3h7z00ypl56b58wb4m3mc949wbx255z"; depends=[base64enc htmltools htmlwidgets leaflet]; }; leaflet = derive2 { name="leaflet"; version="2.0.4.1"; sha256="07whi3zkz1lmbqx5ydpiya802ck22ny0s7gskwnx7r8xbwlkiw5h"; depends=[base64enc crosstalk htmltools htmlwidgets leaflet_providers magrittr markdown png raster RColorBrewer scales sp viridis]; }; leaflet_esri = derive2 { name="leaflet.esri"; version="1.0.0"; sha256="01bwzxh2rdhpvvazaxsji8axl765q1ix1fdxla6i61nvqkpw3dz1"; depends=[htmltools leaflet leaflet_extras]; }; leaflet_extras = derive2 { name="leaflet.extras"; version="1.0.0"; sha256="0li7651cwlz7sg04xdrmvhkrf0n6amaydck7gqz0wkb6wq8hcyzw"; depends=[htmltools htmlwidgets leaflet magrittr stringr]; }; leaflet_extras2 = derive2 { name="leaflet.extras2"; version="1.1.0"; sha256="138d2ajma3fkz7nsh50z4gw5zaflas39gsy7k5l120hxr7nmzgfk"; depends=[htmltools leaflet magrittr]; }; - leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.6.0"; sha256="175zxyvgjbhhp5fl8fz8nr7n9y34ldhs9pnz602x1hk7vpyf3cjc"; depends=[htmltools leaflet]; }; + leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.6.2"; sha256="0pmgr9c3z5zdm13kb17ldjdl3i792mv20gbxzn1asfyf7csp7jxi"; depends=[htmltools leaflet]; }; leaflet_multiopacity = derive2 { name="leaflet.multiopacity"; version="0.1.1"; sha256="0ynbqjs4gdnjsygzwlczrirhazpq2gl9grzyxvnyl4jcpb3yg7y2"; depends=[htmltools htmlwidgets]; }; leaflet_opacity = derive2 { name="leaflet.opacity"; version="0.1.0"; sha256="19dkl105sf7c9wrpl8kzwsjwwc7r9qb4c1g85w2lavpj0pbyazxw"; depends=[htmltools htmlwidgets]; }; leaflet_providers = derive2 { name="leaflet.providers"; version="1.9.0"; sha256="0yynrwv4xd5cdh49cwvfxm4ranarah9iiry2cd3b4fiihdfcg3wy"; depends=[]; }; leafletCN = derive2 { name="leafletCN"; version="0.2.1"; sha256="1rg39n4bjacwss9nbdnz8y2zh8hxlc7a5ygndhjbmzajnbxfh09b"; depends=[htmltools jsonlite leaflet magrittr rgeos sp]; }; leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; }; leafpm = derive2 { name="leafpm"; version="0.1.0"; sha256="06d2k5x6bnv7bf4aw2bayi8sh5bw8z6akwnp7da5s7454hyqn0vv"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet sf]; }; - leafpop = derive2 { name="leafpop"; version="0.0.6"; sha256="0bvj9s3wf8v6l99qqq5g8csq6pyy1f28c1vrhw559s0w10fs771x"; depends=[base64enc brew htmltools htmlwidgets sf svglite uuid]; }; + leafpop = derive2 { name="leafpop"; version="0.1.0"; sha256="1ccxglglfxbm9rlz1lx0jrp6h38w6gld3rld0cxdjjnvw636hm3f"; depends=[base64enc brew htmltools htmlwidgets sf svglite uuid]; }; leafsync = derive2 { name="leafsync"; version="0.1.0"; sha256="0p6pb7w5yz2wj33kdh7ixii9f6b8zv018psp6b7ifr7npgdxi3vx"; depends=[htmltools htmlwidgets leaflet]; }; leaftime = derive2 { name="leaftime"; version="0.2.0"; sha256="10ij06rq7kmfnzfa629l2kskwj96lh87m00wi9b1aq15b5h7bxls"; depends=[htmltools htmlwidgets leaflet]; }; leanpubr = derive2 { name="leanpubr"; version="0.3.1"; sha256="0c8pmzn25cwv0wccf30zrrqrs5amlk8iqyyva9vp9976wzwgbxrx"; depends=[httr jsonlite xml2]; }; @@ -10878,18 +11328,19 @@ in with self; { learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; learnPopGen = derive2 { name="learnPopGen"; version="1.0.4"; sha256="04wxina3n2bspxdp3d4bgqrwyxqxx46pfp8zgzr3rsj89ml8if9l"; depends=[gtools phytools]; }; learningr = derive2 { name="learningr"; version="0.29.1"; sha256="0z3rs7y9yd81f14sbk3dwq1ifr4vca2s3kl1gnkqlns3dycgyp08"; depends=[plyr]; }; + learningtower = derive2 { name="learningtower"; version="1.0.0"; sha256="1q1k7wlklnxbb2yw3l96l7ha73vj3l3bnd4wlh2avmknqk2d8xcq"; depends=[dplyr tibble]; }; learnr = derive2 { name="learnr"; version="0.10.1"; sha256="08xwmms6x58y3dsfbl9c6d03145hb4ij97nqr1cc9dxxilmr6x31"; depends=[checkmate ellipsis evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs renv rmarkdown rprojroot shiny withr]; }; - learnrbook = derive2 { name="learnrbook"; version="1.0.1"; sha256="1yijkwy2v0qh1r3irx7bwyasw938lclsawdam2dkap76qavfrli9"; depends=[]; }; + learnrbook = derive2 { name="learnrbook"; version="1.0.2"; sha256="13jd5j597pv3ainy6xx7ra402ymrh25hgfjzq0csq6d86n5fz3aj"; depends=[]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; leastcostpath = derive2 { name="leastcostpath"; version="1.8.0"; sha256="1106wh2yy048jimiyb3gwm9d00jfq4wk0dnj4a5sfk90rkg28acw"; depends=[gdistance Matrix pbapply raster rgdal rgeos sp]; }; ledger = derive2 { name="ledger"; version="2.0.7"; sha256="07shnvawahm9bvwz37fynkp7sd69y9gc1mjhn7x8883jz8k4mjic"; depends=[dplyr rio rlang stringr tibble tidyr tidyselect]; }; leerSIECyL = derive2 { name="leerSIECyL"; version="1.0.2"; sha256="1zx28gpnys9mmhq7wwljfnq92wj1h1vxgqiirnfmn36z942nvmxl"; depends=[RCurl]; }; - lefko3 = derive2 { name="lefko3"; version="3.4.0"; sha256="1vlhbpz11sa59kxgcrnisf01i0b5dbigir4cmxr1rn7fw9x1c9hs"; depends=[glmmTMB lme4 MASS MuMIn pscl Rcpp RcppArmadillo SparseM stringr VGAM]; }; + lefko3 = derive2 { name="lefko3"; version="3.8.0"; sha256="1x8nrm6zvgkv7j0jrq69lvl0a3g9ysvibq8457azy7k5nzsla4zl"; depends=[glmmTMB lme4 MASS MuMIn pscl Rcpp RcppArmadillo SparseM stringr VGAM]; }; legco = derive2 { name="legco"; version="0.1.3"; sha256="1615whdqihpzfhp5ll3x3jg4py04l52dc87kbdmgln4ygxyy5sqh"; depends=[httr jsonlite]; }; + legion = derive2 { name="legion"; version="0.1.0"; sha256="0lpxg3jx9ll3748aixr84yl44ig8arqj6axzr80402kzjndc2z3h"; depends=[greybox nloptr pracma Rcpp RcppArmadillo smooth statmod zoo]; }; legislatoR = derive2 { name="legislatoR"; version="1.0"; sha256="1553hpb2cmv3hw6v4c7qwgg8n18jwx101yaqnmaaiv8gfyh6j43m"; depends=[curl dplyr]; }; legocolors = derive2 { name="legocolors"; version="0.3.1"; sha256="0ds9c2x0x590yk7mrjm4hh7k72p51slssg7jlprd71mw6hry91ma"; depends=[]; }; - lehdr = derive2 { name="lehdr"; version="0.2.4"; sha256="00ddpjzpb7n1hnkx7y49wrak8gdxc48c69p37nk0f2mhg729qxl8"; depends=[dplyr glue httr rappdirs readr rlang stringr]; }; - leiden = derive2 { name="leiden"; version="0.3.7"; sha256="14iqn5iqcya6bqbjvjivpd7q9gwc323sj29y7ssrbhb3sz9982bp"; depends=[igraph Matrix reticulate]; }; + leiden = derive2 { name="leiden"; version="0.3.9"; sha256="03gaxpcab3a1av5lk8r5ll1s858gvyx5ndknci1sia96w1v44xc1"; depends=[igraph Matrix reticulate]; }; leidenAlg = derive2 { name="leidenAlg"; version="0.1.1"; sha256="1540h4jak4g482d3g9iqrgp388mmbw3640swh9bsk6xhg1j8r0s7"; depends=[igraph Matrix Matrix_utils Rcpp RcppArmadillo RcppEigen sccore]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; lemon = derive2 { name="lemon"; version="0.4.5"; sha256="1y3ljidhqdakxlya2npj2w0az820g8kw6gl1cfm4f0cxvzgd1ly4"; depends=[ggplot2 gridExtra gtable knitr lattice plyr rlang scales]; }; @@ -10897,42 +11348,45 @@ in with self; { leontief = derive2 { name="leontief"; version="0.2"; sha256="1gy23047c6gci9m83yrb662d5685x1kky6m94w68swms59gdc6yp"; depends=[Rcpp RcppArmadillo]; }; leri = derive2 { name="leri"; version="0.0.1"; sha256="1309v58xdw3p6y2wpnl64vgsds5kvfiary2a3fa041kz23jzbp3c"; depends=[ncdf4 raster]; }; lero_lero = derive2 { name="lero.lero"; version="0.2"; sha256="03ll7jzcay0swwpmxyf0y9k2h8mxx4p5v3ggm9dgdz4j99934l70"; depends=[]; }; - lessR = derive2 { name="lessR"; version="3.9.9"; sha256="0p567g1zgagas3ky0pqffn26s1hw7sh56r5nbbs3xn9fl0iff60i"; depends=[colorspace ellipse knitr lattice latticeExtra leaps openxlsx robustbase viridisLite]; }; + lessR = derive2 { name="lessR"; version="4.0.3"; sha256="02lcy1ajwsslpxsj1ygkc4nax1l4j2jrpz4082h8w5dc20hqpdjd"; depends=[colorspace ellipse knitr lattice latticeExtra leaps openxlsx robustbase viridisLite]; }; lest = derive2 { name="lest"; version="1.1.0"; sha256="1d69kvdl31crv4ik8bwylq3s3f4skzrjc4x49c79w443g64n2jp9"; depends=[]; }; lestat = derive2 { name="lestat"; version="1.9"; sha256="1skxymdf3ncmdbskh7711xxgwsmwxfxnl52gcgw06jscx6s6wrsd"; depends=[MASS]; }; letsR = derive2 { name="letsR"; version="4.0"; sha256="07l1wgwnkqnvh47ssg62vj88vgml52n0934w00pjxdk90kk3c5zs"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; + levitate = derive2 { name="levitate"; version="0.1.0"; sha256="1v55fdsf4ss5wb2zr7wppbr7dab6k5z7igpd8i5nk9fk1haq3aa1"; depends=[cli glue rlang stringdist stringr]; }; lexRankr = derive2 { name="lexRankr"; version="0.5.2"; sha256="0vb4m4g88k05yhjla1gwp8ck08356r9dzwal6cq7lb6xm6pl5gvi"; depends=[igraph Rcpp SnowballC]; }; lexicon = derive2 { name="lexicon"; version="1.2.1"; sha256="0x7rscsh6par2lj11sby7bmz41cxn63iiw51lgh29z09cg8j606c"; depends=[data_table syuzhet]; }; lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; }; lfactors = derive2 { name="lfactors"; version="1.0.4"; sha256="1r8qlwj3zsm233jfx9ag0q5g1knvjmbwl3785pwcd12zi6f68dcc"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.3"; sha256="0sk409jx4chs2wzhpfw7rlg9pwpdqg32ncfl3w243ypq73jq0qv3"; depends=[plyr rARPACK]; }; - lfe = derive2 { name="lfe"; version="2.8-6"; sha256="04hn227zmvk5jjdn0rxn0rjsx2f4cajhvwrna8d8fbkjx5id6pxz"; depends=[Formula Matrix sandwich xtable]; }; - lfl = derive2 { name="lfl"; version="2.1.1"; sha256="1xark6il5986vsp24vzc6668g0hb177d5wh45gw102644jnq64y9"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; - lfmm = derive2 { name="lfmm"; version="1.0"; sha256="0n7whmqxybv02k7nc0w5g2ncs43dyq3zdcnnn27vanq9mfxvhbjc"; depends=[foreach ggplot2 knitr MASS purrr Rcpp RcppEigen readr rmarkdown RSpectra]; }; + lfe = derive2 { name="lfe"; version="2.8-7"; sha256="0yzif44kjnlr2iva8l9vi0kw83kadw573i3x5xnam0s5mhha1hlp"; depends=[Formula Matrix sandwich xtable]; }; + lfl = derive2 { name="lfl"; version="2.1.2"; sha256="0qi84mmsxah6yjacf6q2grgd40nqkf75srcfwksacv90qz6bvm0x"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; + lfmm = derive2 { name="lfmm"; version="1.1"; sha256="1v2sb2qghwcln3b5rpzhakg562izlzyxzvz49nz74y0rh2gx7g9i"; depends=[foreach ggplot2 knitr MASS purrr Rcpp RcppEigen readr rmarkdown RSpectra]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; lg = derive2 { name="lg"; version="0.4.1"; sha256="1srlklq6hkb4yd3lbbazswj866i3wzk2524hhj1v45yr7d5qhxv0"; depends=[ggplot2 ks localgauss logspline mvtnorm np tseries]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; lgcp = derive2 { name="lgcp"; version="1.7"; sha256="0i45n31wxznl6485zsa5nnfhy4f3lya9sijyavdcwx0v8j2gkpvr"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_core spatstat_geom spatstat_utils]; }; - lgr = derive2 { name="lgr"; version="0.4.2"; sha256="0k4kacjk7swm3gmdpha1rg44xb29vzvhvx48jhpb78glj5c9phyr"; depends=[R6]; }; + lgpr = derive2 { name="lgpr"; version="1.1.5"; sha256="03wf6n3agls48r1a82aw6sywj3hzs0pza29l3p68nlqlkf9amnnw"; depends=[bayesplot BH ggplot2 gridExtra MASS Rcpp RcppEigen RcppParallel RCurl rstan rstantools StanHeaders]; }; + lgr = derive2 { name="lgr"; version="0.4.3"; sha256="18s92qyakhvp336kk2777ydypwfrfwfz6a1gqkq812zy3kcb4mcc"; depends=[R6]; }; lgrExtra = derive2 { name="lgrExtra"; version="0.0.5"; sha256="0h34rb8diavs7an45nng8xfs96x3h2kkl9xy7yzjg851m3f7pbiq"; depends=[data_table lgr]; }; lgrdata = derive2 { name="lgrdata"; version="0.1.1"; sha256="0h1crdhqfp6hzx30lp0w015scf2566hhrl2i7mkxy868rkl3aig9"; depends=[]; }; lgtdl = derive2 { name="lgtdl"; version="1.1.5"; sha256="1sixq56d2px36q0xq3kl0zwj2yzm3q8fhgqjvmajcdd5jl8l7130"; depends=[]; }; lhmixr = derive2 { name="lhmixr"; version="0.1.0"; sha256="1c4ydgq1z2y0xk8xqdsim6xvgxdbl3gglfk5kcr9k4m01arvv0rf"; depends=[]; }; - lhs = derive2 { name="lhs"; version="1.1.1"; sha256="1p4h03qlijs2a59wfd4rlvdlb9i87pw2zm8xsjd6yzz8vlm9yglh"; depends=[Rcpp]; }; - liayson = derive2 { name="liayson"; version="1.0.3"; sha256="10xkzy4vlszcdclrdv0d6nyzgh3ldr5rk59ml8bxx06dbh5c0h99"; depends=[ape arules biomaRt distances e1071 gplots matlab phangorn plyr proxy RColorBrewer]; }; - libbib = derive2 { name="libbib"; version="1.5"; sha256="1jr2nvf66b4rh7mf77l5gi35zwz61wgshs7if3sqxrr6pxlcx0wc"; depends=[curl data_table pbapply stringr xml2]; }; + lhs = derive2 { name="lhs"; version="1.1.3"; sha256="1l861h76q5w0nbnbybhgg7hiw7fks677jakyd49n1whwvd48sfz4"; depends=[Rcpp]; }; + liGP = derive2 { name="liGP"; version="1.0.1"; sha256="01yhrzx67gz7j201mkv1aracrvjh4hxkrc7jn48cfwz0dp1lznws"; depends=[doParallel foreach hetGP laGP]; }; + liayson = derive2 { name="liayson"; version="1.0.4"; sha256="0xxl2l24km563n649kxzr15q0f6ks7l5yab3ig229s50i6sbn8nd"; depends=[ape arules biomaRt distances e1071 gplots matlab phangorn plyr proxy RColorBrewer]; }; + libbib = derive2 { name="libbib"; version="1.6.2"; sha256="1d6d4fc9bpj8lkkblqcccdcsf21136vdr38kzy91259z3525gvcg"; depends=[curl data_table pbapply stringr xml2]; }; libcoin = derive2 { name="libcoin"; version="1.0-8"; sha256="0izgnr4zdrbz3a05b0s28xfly4izp2zslgh282l9ads4skrmj3hl"; depends=[mvtnorm]; }; - libgeos = derive2 { name="libgeos"; version="3.8.1-4"; sha256="0h6n92rxha52m5nq2gvxh9q5bkaifbxh1qxm5sq0cc1kb939vfba"; depends=[]; }; - libr = derive2 { name="libr"; version="1.1.3"; sha256="10jq2675gp0zrxld64bd3j8rm62vgvary7mriaam16bp7yx59raq"; depends=[crayon dplyr haven openxlsx readr readxl tibble]; }; - librarian = derive2 { name="librarian"; version="1.7.0"; sha256="0n3q2ppa3p0w8ypgx9s738pmprfbqi9qg8n58xzplp809p903dj9"; depends=[BiocManager remotes]; }; + libgeos = derive2 { name="libgeos"; version="3.9.1-1"; sha256="0bx7cp1n2l1ayf3w2a0hhd12crfxii9c50gzagd9lc840xgdipsn"; depends=[]; }; + libr = derive2 { name="libr"; version="1.2.0"; sha256="01wd1y0x6pifbn14xqqg52vvzsx5amxa4x04hwda6fimprriwxm3"; depends=[crayon data_table dplyr haven openxlsx Rcpp readr readxl tibble]; }; + librarian = derive2 { name="librarian"; version="1.8.1"; sha256="0bbgx9pdwcv64p6zdrw3m0893ar4bw6z90vhbgplp53l65cch548"; depends=[BiocManager remotes]; }; librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.7"; sha256="1r548rvj98wl0yp6jx5d2qhvy1y4883qp0w3jjk97vp07a1cywn8"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0.2"; sha256="1gkcgbc8a7ks9x8mqmlz98hk55q3qy62izam7csz1s0r5dzsyqcr"; depends=[Rcpp RcppGSL]; }; - lidR = derive2 { name="lidR"; version="3.1.2"; sha256="1502rg3j219kw2919sbjcfy3xfki6wzzfxw8q5w8zm5mxn7jgbg4"; depends=[BH data_table future geometry glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; - lidaRtRee = derive2 { name="lidaRtRee"; version="3.0.3"; sha256="0v475b6i37rjnq4gfzjnrs0y6w37c84lzi72yf20c4nxq3x7ppdk"; depends=[car gvlma imager leaps lidR raster reldist sp]; }; + lidR = derive2 { name="lidR"; version="3.1.4"; sha256="0i1g2lq72slc305y86bxhfv47qqdf0ahcwcq3f9hb6dh94js2ps6"; depends=[BH data_table future geometry glue lazyeval raster Rcpp RcppArmadillo RCSF rgdal rgeos rgl rlas sf sp]; }; + lidaRtRee = derive2 { name="lidaRtRee"; version="3.1.0"; sha256="17k6gysypc91lx5701bvf4rvh10rrmmz7z6xlm09cchqfpkhlvch"; depends=[car gvlma imager leaps lidR raster reldist sp]; }; lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.7"; sha256="00vqbrv1y3hg8iqx6mfm7p81a23hf69kc20pzacsx93yqdh97841"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; - lifecycle = derive2 { name="lifecycle"; version="1.0.0"; sha256="13hgxk93q9387s8dnqpm8dfx610y0pr76khqksj4kbgj2fr4lcq3"; depends=[glue rlang]; }; + lifecycle = derive2 { name="lifecycle"; version="1.0.1"; sha256="183v1z1h037pvsgrj6vakpwhnhsr29hsw8p16k59dgpi00f6x9qx"; depends=[glue rlang]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; liftLRD = derive2 { name="liftLRD"; version="1.0-8"; sha256="1m24f4mc70l808cpkcdm91hzb5b3bkzibvgyfi9zs6cs8apcvmy3"; depends=[adlift nlt]; }; @@ -10940,9 +11394,8 @@ in with self; { lifx = derive2 { name="lifx"; version="0.2.0"; sha256="0p9ljd3s3lc1rkhzpp801izy9y52f0yc1dsrsxwx5gi89cnib596"; depends=[assertthat crayon curl httr jsonlite]; }; liger = derive2 { name="liger"; version="2.0.1"; sha256="121ipwznm40x2xhhlxd20385va4nmvgni5dg24lbhyfn5sb3dsy1"; depends=[matrixStats Rcpp RcppArmadillo]; }; lightgbm = derive2 { name="lightgbm"; version="3.2.1"; sha256="1136di7k3gs9kk7vd9bc3mdm0qrx3a546ngar8inmgyhi0zk6pkd"; depends=[data_table jsonlite Matrix R6]; }; - lightr = derive2 { name="lightr"; version="1.4"; sha256="1vpbvi5gjfxvgqznvb8fzcfn4kgphs9n3x4n2432zb3n38rnaljh"; depends=[future_apply progressr xml2]; }; + lightr = derive2 { name="lightr"; version="1.6.0"; sha256="1d1xrsra3ng5g9vlsvdgimfyx6kqdazwv8i787qh3nbavxfqjmay"; depends=[future_apply progressr xml2]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; - likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; }; likelihood = derive2 { name="likelihood"; version="1.7"; sha256="0q8lvwzlniijyzsznb3ys4mv1cqy7ibj9nc3wgyb4rf8676k4f8v"; depends=[nlme]; }; likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.51"; sha256="0qxwdf6npyj926zd2pbfscgz1z01hwgm6099h882d2l1sim2j9g7"; depends=[alabama cond digest nleqslv pracma Rsolnp]; }; likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; @@ -10952,6 +11405,7 @@ in with self; { lillies = derive2 { name="lillies"; version="0.2.9"; sha256="0ljqfl9w26z61fivzlr4sh371s418alzzkdlhghsq0w03871wd3h"; depends=[ddpcr dplyr knitr pracma progress rlang survival tidyr]; }; limSolve = derive2 { name="limSolve"; version="1.5.6"; sha256="1829rd2cnd8qj80z9a7sgc7gx4sf3kvl5g6d2a0lqqw30f9sjzmr"; depends=[lpSolve MASS quadprog]; }; lime = derive2 { name="lime"; version="0.5.2"; sha256="03b88s82f0386c44j3z74dwp9f765wx9n1ahrjpy0s2j0pfa5z09"; depends=[assertthat ggplot2 glmnet gower Matrix Rcpp RcppEigen stringi]; }; + liminal = derive2 { name="liminal"; version="0.1.2"; sha256="1ka16fm0gzhpydlk5pjf1vjcb7ygx1d3iv4z8cs6ywzrq4bb5r61"; depends=[dplyr jsonlite matrixStats miniUI rlang shiny tourr vegawidget]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; lin_eval = derive2 { name="lin.eval"; version="0.1.2"; sha256="05saxzzwh3gs6a4ii63n5kjm06p399xkyrjnqvn9f164322p7pwb"; depends=[broom]; }; linERR = derive2 { name="linERR"; version="1.0"; sha256="1mhiyqfpwagg161ncp5ndd22hlh12qzr360nms13rgyd8a077cq7"; depends=[survival]; }; @@ -10959,17 +11413,15 @@ in with self; { linbin = derive2 { name="linbin"; version="0.1.3"; sha256="04x97ah45qljpa4kg1iqz85w0q7936n4sq7vbzk2mx5m87p83czh"; depends=[]; }; lindia = derive2 { name="lindia"; version="0.9"; sha256="1qma8wr0fkwx03x971crkh8cfc8z4374py1r1wvszj9wzi4vfp5r"; depends=[ggplot2 gridExtra MASS]; }; linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; - linearOrdering = derive2 { name="linearOrdering"; version="1.0.0"; sha256="1y9wcmcwbaqphzv8mk3xgk49pmd8m020zv3qmi85b5kzzqam1r4z"; depends=[]; }; linearQ = derive2 { name="linearQ"; version="2.0"; sha256="0sx7bx0x1k193day5w1dbmc09kn5741pcilxijjn2y5aijhd5wk9"; depends=[Rcpp stepR]; }; lineartestr = derive2 { name="lineartestr"; version="1.0.0"; sha256="0bzsywk97j2mmsi7pj9267za1q2601crynh9kszwj6xjbg08nvsm"; depends=[dplyr forecast ggplot2 Matrix readr sandwich tidyr viridis]; }; linemap = derive2 { name="linemap"; version="0.2.0"; sha256="04nb0hmmikksp7ak4vdam9r2dpv7w3r5wkxxbjr7yk9pfq5gjncp"; depends=[sf]; }; - lineqGPR = derive2 { name="lineqGPR"; version="0.1.1"; sha256="180rvmpasdw8r3w5lw6dxg5jkj875dklvifi2msyp0vaq1nbpbwp"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr plot3D purrr quadprog tmg TruncatedNormal]; }; lineup = derive2 { name="lineup"; version="0.38-3"; sha256="15m90cg700lq1w54adkmld876fpr41nhv1y0vqwbhwwfjgfxj700"; depends=[class qtl]; }; - lineup2 = derive2 { name="lineup2"; version="0.4"; sha256="18qak0qjdzr34fslh3qc9q25mr06jzjf00aafnvhcmnkav7d5bv5"; depends=[Rcpp]; }; + lineup2 = derive2 { name="lineup2"; version="0.6"; sha256="0qkxwn30g0bjm9aq9a59pb3xq844qr43ribnk607zlf8lwbibsk2"; depends=[Rcpp]; }; lingmatch = derive2 { name="lingmatch"; version="1.0.2"; sha256="1986vi8r105wsd27vzy7wq9w0flgmgigssa3p0j7xmgr4kmjkks4"; depends=[Matrix Rcpp RcppParallel]; }; - lingtypology = derive2 { name="lingtypology"; version="1.1.4"; sha256="04pfgnwfywfwzw3xgi0xd5mi9dgjgj65i32hm5b8zjj5pamk9hcv"; depends=[leaflet leaflet_minicharts stringdist]; }; + lingtypology = derive2 { name="lingtypology"; version="1.1.5"; sha256="0nhbq6zhhh9rjn4s6wihcan3a1x9iaj1l4wh0nxqryklacjgrdny"; depends=[jsonlite leaflet leaflet_minicharts stringdist]; }; linguisticsdown = derive2 { name="linguisticsdown"; version="1.2.0"; sha256="1y2g8h0p4q4mjrawzyprsdw8ynqcbpnjypyhdaf03pcwqglcirkl"; depends=[DT knitr magrittr miniUI rstudioapi shiny stringr]; }; - link2GI = derive2 { name="link2GI"; version="0.4-5"; sha256="0vmmhalxazny0j871fwbh0z21b63wang69l2wkpw3awkn3fsaqz4"; depends=[devtools R_utils raster roxygen2 sf stringr]; }; + link2GI = derive2 { name="link2GI"; version="0.4-7"; sha256="0fl7m1r7iaihkym0k65gg2dqr03fra93zjwbddq14lsm1bx1hg7w"; depends=[devtools R_utils raster roxygen2 sf stringr]; }; linkcomm = derive2 { name="linkcomm"; version="1.0-14"; sha256="15xm4c7sqpid1vjra250dnvdx98qgzbzmvaycf3zqqnqcmy5bw9n"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; linkprediction = derive2 { name="linkprediction"; version="1.0-0"; sha256="0p2abdq6ad689236w2d0khlycpjgy6j7xrlb96ngl6csgxwm07bl"; depends=[igraph intergraph]; }; @@ -10991,18 +11443,18 @@ in with self; { listWithDefaults = derive2 { name="listWithDefaults"; version="1.2.0"; sha256="1rv9jq9zlr5dm08mimba6ni2p5vkfybrgrqk1alm7y6mqpx56byp"; depends=[assertthat]; }; listarrays = derive2 { name="listarrays"; version="0.3.1"; sha256="0nfpqywq9pl9yj566y0jw0h89g0ppsc614538ns1jc3l5r2myils"; depends=[]; }; listcomp = derive2 { name="listcomp"; version="0.3.0"; sha256="09dazc1s06f2pk696jc64lnhs007hqrjjx6z2m6rrswp8yq1p2p2"; depends=[digest rlang]; }; - listcompr = derive2 { name="listcompr"; version="0.2.0"; sha256="11m63zkbm6b4cv5vppjmy1dg4vs0s2kb4fpalng7kji6k16fnjcn"; depends=[]; }; + listcompr = derive2 { name="listcompr"; version="0.3.0"; sha256="0wv5iaysa3h662x90jr8n8whx5qwqs7gm3gp1jgc25d3slaz2q2z"; depends=[]; }; listdown = derive2 { name="listdown"; version="0.4.1"; sha256="1i7vx71nc3vig73kxwaccdgjr91pa3sbl886qppqz4i3ns3z5vgr"; depends=[crayon yaml]; }; listdtr = derive2 { name="listdtr"; version="1.1"; sha256="13p27cx2w3qb1rcizrva2ib7x7sm310gasi7n5pvvd8rkpwaypzq"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.8.0"; sha256="0ps8bk7zlhbviawrw7vw25skjq81hkk3ijyi6g74dmfqy8zsyapx"; depends=[]; }; listviewer = derive2 { name="listviewer"; version="3.0.0"; sha256="0zirxdj58h43062f68h6nqcgmpnvdglxx3kjbs4i4k0z9wvqhx8r"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.1.0"; sha256="0w3w9f6374qwvlrqknavqh9b38n5q1r6aw5zmz5lahvadalwdbwi"; depends=[assertthat DBI rappdirs RSQLite]; }; - litteR = derive2 { name="litteR"; version="0.8.2"; sha256="07ap8nw703d260n559p455lrxgrkp2j7wy03alxhxm60mni82183"; depends=[dplyr fs ggplot2 purrr readr rlang rmarkdown stringr tidyr tidyselect yaml]; }; - littler = derive2 { name="littler"; version="0.3.12"; sha256="1vyppxfk7wi9ncv7ms1pcmwi8l1h4panqkbkmyc1q5vv47jq6fai"; depends=[]; }; + litteR = derive2 { name="litteR"; version="0.9.1"; sha256="14giq4lp3g1srkj8y94y8sih11ix32fnh6nwaz3xvrx7jm2ic580"; depends=[dplyr fs ggplot2 purrr readr rlang rmarkdown stringr tidyr tidyselect yaml]; }; + littler = derive2 { name="littler"; version="0.3.13"; sha256="0sa4gzwm93w1kfxgbi711hv6b77srzavsa35q5472zagv6y9jgzh"; depends=[]; }; liureg = derive2 { name="liureg"; version="1.1.2"; sha256="1zhc5fs47whjvvwwiivykxfchzbjbldyvdmqh9rp7ccwba2q3956"; depends=[]; }; live = derive2 { name="live"; version="1.5.13"; sha256="1s6yrbwlc4wqszl2yvy1x6d93my18ba8sm8pwfy547cd1x055vig"; depends=[breakDown data_table dplyr e1071 forestmodel ggplot2 gower MASS mlr shiny]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; - liver = derive2 { name="liver"; version="1.7"; sha256="1bw0py3mmx1ajrgzhm8nz85ns6fsrmwgxjxzqs44zqy6p5cxg12w"; depends=[class ggplot2]; }; + liver = derive2 { name="liver"; version="1.9"; sha256="1pyv4s4sh4mhgh73g2l604855nvagpw0cqra5gy6zi7wj3zx632q"; depends=[class ggplot2]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; llama = derive2 { name="llama"; version="0.10.1"; sha256="1rw4lbz172hwb24r424qq86bw7m3xxl66k474wx1scpcrsix2nzw"; depends=[BBmisc checkmate data_table ggplot2 mlr parallelMap plyr rJava]; }; llbayesireg = derive2 { name="llbayesireg"; version="1.0.0"; sha256="0jhkmrjkqfm1flwsbpv6060j6g7cj4ngm0drvrlvsiqpni0k96mh"; depends=[coda ggplot2 llogistic MASS MCMCpack Rcpp rstan StanHeaders]; }; @@ -11011,18 +11463,18 @@ in with self; { llogistic = derive2 { name="llogistic"; version="1.0.3"; sha256="0wfszgcdi0i3lsm7gsih6a411v353c2gpbg3f06n6c2n35939lsl"; depends=[]; }; lm_beta = derive2 { name="lm.beta"; version="1.5-1"; sha256="0p224y9pm72brbcq8y1agkcwc82j7clsnszqzl1qsc0gw0bx9id3"; depends=[]; }; lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; }; + lmDiallel = derive2 { name="lmDiallel"; version="0.9.4"; sha256="11v3s9s0xdvmhm0insfpc5i7q1mvgb1zz0r7a97p3sbr8ylw251c"; depends=[multcomp plyr sommer]; }; lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; lmQCM = derive2 { name="lmQCM"; version="0.2.3"; sha256="0zld7gyng9kk3np62j8xfg951gvgsq2r8x3zmjfr2ykalw36kx5d"; depends=[Biobase genefilter progress]; }; lmSubsets = derive2 { name="lmSubsets"; version="0.5-2"; sha256="1afdpcp3qiiprzc47cbckf49jd3f8ip81441ghgx0kfx54d1m305"; depends=[]; }; lmSupport = derive2 { name="lmSupport"; version="2.9.13"; sha256="0ln5c91mbxkymgnv2nw5m3nrm5bwckpikgb9x1qhmjc55m98wkb8"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; lmboot = derive2 { name="lmboot"; version="0.0.1"; sha256="1v7a3vlv0187mpg3y3pj7f3pbk1v5n6amw732chy10vdw5nmfkwd"; depends=[evd]; }; lmds = derive2 { name="lmds"; version="0.1.0"; sha256="130azb0nc2wwxv0qi8v5s4rd02p9lc92zwn634pv7b8awbw81i65"; depends=[assertthat dynutils irlba Matrix]; }; - lme4 = derive2 { name="lme4"; version="1.1-26"; sha256="0ls2krph4pfjn45vf9fn3ln3x98s85wxrkvm5pnxyx55n1pnsjrn"; depends=[boot lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen statmod]; }; + lme4 = derive2 { name="lme4"; version="1.1-27.1"; sha256="1i9f8kl2qj48j75dbn1vmwxz1xlbikdr7v2yq542w6dq74z8gyi5"; depends=[boot lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; lmeInfo = derive2 { name="lmeInfo"; version="0.1.3"; sha256="1y75dv90jj8jzz4z4iixbv7ipbdx9f7wrjbjj46a8wjiidj1l5zw"; depends=[nlme]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; - lmeVarComp = derive2 { name="lmeVarComp"; version="1.1"; sha256="0m6syydy89c52hhi0w503l5vkgya2d5ps70z5wmdd39nm4jna68w"; depends=[]; }; lmec = derive2 { name="lmec"; version="1.0"; sha256="09shj01h2dl5lh7ch0wayr7qyhlmk0prv3p1vfgy91sn0wpbqlxr"; depends=[mvtnorm]; }; lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; lmerTest = derive2 { name="lmerTest"; version="3.1-3"; sha256="1zd8gqjkazhxgpnnr484xwsq30p62fq8592nzyc171zjyplpbaim"; depends=[ggplot2 lme4 MASS numDeriv]; }; @@ -11036,31 +11488,33 @@ in with self; { lmom = derive2 { name="lmom"; version="2.8"; sha256="1lnj41gynaar5isyijg5nbll64qdxa12dnqvz7lxhaclqcjskqna"; depends=[]; }; lmomPi = derive2 { name="lmomPi"; version="0.5.0"; sha256="07ggfzgvhc6kkqs8bbs6z01rbhgb0ki2y4li6r0nkiby1wcpx0py"; depends=[lmom stringr]; }; lmomRFA = derive2 { name="lmomRFA"; version="3.3"; sha256="113sz2lgb3yv3ayy3x831qww3d088yw2iyjrdc8jfhq6id1w9giq"; depends=[lmom]; }; - lmomco = derive2 { name="lmomco"; version="2.3.6"; sha256="18qpkx601gzy33d9kfrpf6mxxb9z6rkz030cx3drb4w5n6langjb"; depends=[goftest Lmoments MASS]; }; + lmomco = derive2 { name="lmomco"; version="2.3.7"; sha256="1pxk3hpmihhzyy3yawmi7d6fq0zfxliz8lwsbr9jr1kahhhbw982"; depends=[goftest Lmoments MASS]; }; lmreg = derive2 { name="lmreg"; version="1.2"; sha256="02a4nqqcfkjlq21mpk8abd4lj4ib2nps3ndf7zgmzygkd1z0df18"; depends=[MASS]; }; lmridge = derive2 { name="lmridge"; version="1.2"; sha256="091rznzh77bmsv7sw9xmsq6s9pnljyq7qyl74kgcxss718134jr3"; depends=[]; }; lmtest = derive2 { name="lmtest"; version="0.9-38"; sha256="0sr19bmw2cpagfvwg772m79wvl1i2hww1xfr69bzr3rr8pm2r8ij"; depends=[zoo]; }; - lmtp = derive2 { name="lmtp"; version="0.9.0"; sha256="0xwpcbbq5jbm868svmwlfplh43ydqj8ziphyrrzqkwsdfgd5016m"; depends=[cli data_table future generics nnls origami progressr R6 SuperLearner]; }; + lmtp = derive2 { name="lmtp"; version="0.9.1"; sha256="10b21da6fba8ipy79sxi9ycmzh2flpwy8wrzgqz8nymp63ngqk53"; depends=[cli data_table future generics nnls origami progressr R6 SuperLearner]; }; lmvar = derive2 { name="lmvar"; version="1.5.2"; sha256="0wrny8yzk5y4mzpri6xv5wibbnbaxm0195lcbk5jrl5l5gs99bn6"; depends=[Matrix matrixcalc maxLik]; }; lmviz = derive2 { name="lmviz"; version="0.2.0"; sha256="0sl2k02m5bxkb4jg8y666ln0xxhr4dhsfz9hlp55p9smlhycl5s2"; depends=[car lmtest MASS mgcv rgl scatterplot3d shiny shinyjs]; }; lncDIFF = derive2 { name="lncDIFF"; version="1.0.0"; sha256="012dwrcp0pny59hvzj7mnyyc3nijcjgxc0dyx7ab2fknp9bhs5w8"; depends=[]; }; loa = derive2 { name="loa"; version="0.2.47.1"; sha256="1xzcf3cvk3zrlqknrw5j19g7z4lw74ahw7cwavx7c9b007kk7f5c"; depends=[lattice MASS mgcv OpenStreetMap plyr png RColorBrewer rgdal RgoogleMaps sp]; }; + loadings = derive2 { name="loadings"; version="0.1.1"; sha256="0nickkdjkfsjy8k52243181fdd1jvj3rgpzkcfjsmacbjcdl169g"; depends=[]; }; loadr = derive2 { name="loadr"; version="0.1.3"; sha256="01nsjsv7c8grsizfisczqwjrz5saff0pgn7716ig4i8nzargvz7a"; depends=[]; }; lobstr = derive2 { name="lobstr"; version="1.1.1"; sha256="0vkif17825x33cz8r89j0qph4wj5l8fzfgl8nh2g7m2v140cxjdq"; depends=[crayon Rcpp rlang]; }; locStra = derive2 { name="locStra"; version="1.7"; sha256="0pvxifzhafhb0iv2d9ar90j2436zjgdzav0dyjir7xrc4s597bxk"; depends=[Matrix Rcpp RcppEigen Rdpack RSpectra]; }; localFDA = derive2 { name="localFDA"; version="1.0.0"; sha256="099hqnd0q4ylg03qi7icc6a9w1x7p76vlv5wxk8f53l7y9pp27b3"; depends=[]; }; localICE = derive2 { name="localICE"; version="0.1.1"; sha256="1pyq6kdahsy9qa0jzmring48r0i9h4rkp8lxpf9afksgm1qn0c5z"; depends=[checkmate ggplot2]; }; localIV = derive2 { name="localIV"; version="0.3.1"; sha256="1z3q5hk6qfc1pzqdrxwm8y3am27648lfz66lm84bf8abifw4kk60"; depends=[KernSmooth mgcv rlang sampleSelection]; }; - localModel = derive2 { name="localModel"; version="0.3.12"; sha256="1yg61zia8gqgzbg33k6q43ni04cj6y9l3k8vdcw8j1qzasnhz0b2"; depends=[ggplot2 glmnet ingredients partykit]; }; + localModel = derive2 { name="localModel"; version="0.5"; sha256="12kx3bhcdllrkmhgbpx4i8k64amm39dihd6y4a5vvyhvjpbv0ssj"; depends=[DALEX ggplot2 glmnet ingredients partykit]; }; localScore = derive2 { name="localScore"; version="1.0.6"; sha256="0s1ral5ph4ir2a7vl4ii8wkp3j3lg0c1lsa94z72xqdkbibg5q6d"; depends=[Rcpp]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; }; - locatexec = derive2 { name="locatexec"; version="0.1.0"; sha256="1137m4bqgi0bbp7hnk1bicg83jxgjqa18xhbjmx6lfs3d7pzk2i4"; depends=[]; }; + locatexec = derive2 { name="locatexec"; version="0.1.1"; sha256="03vssc243nczwqp6z4adchcxql5aq0h3cs0daq5xwnncjmy3k7mx"; depends=[]; }; locationgamer = derive2 { name="locationgamer"; version="0.1.0"; sha256="0y99m003s177x57m4ynxd8jd2xzl5zb4bj7jnbc04h22ffdl6m6f"; depends=[]; }; locfdr = derive2 { name="locfdr"; version="1.1-8"; sha256="1falkbp2xz07am8jlhwlvyqvxnli4nwl188kd0g58vdfjcjy3mj2"; depends=[]; }; locfit = derive2 { name="locfit"; version="1.5-9.4"; sha256="1vcw16qww4v4547w0gfvhqg60l051bsdlxa6zfcgcj9xbxf6dlyr"; depends=[lattice]; }; locits = derive2 { name="locits"; version="1.7.3"; sha256="0sjnwqiqwzdkglvbdxbkg17gjp0vyqvywsy0qq7adxj5hh0yah05"; depends=[igraph wavethresh]; }; locpol = derive2 { name="locpol"; version="0.7-0"; sha256="1p915n0l09kbwkly627074jslxl01yssp1rf0c7sygvsw6sgy5lm"; depends=[]; }; + locpolExpectile = derive2 { name="locpolExpectile"; version="0.1.1"; sha256="1phwcnbk1vmdk3qmfx2nd6crplly2lb8gb57yl67ky3c4sryh358"; depends=[expectreg lestat locpol matrixcalc quantreg]; }; lodGWAS = derive2 { name="lodGWAS"; version="1.0-7"; sha256="0g5b44d3wb5hnx5l2n76myb1pc9ml3a052n1a4gvgqapa5as35s2"; depends=[rms survival]; }; loder = derive2 { name="loder"; version="0.2.0"; sha256="0m6g8c25dmq0wgpy8y6cbggymxdvqwb6lp2yzs5bgpq183512spb"; depends=[]; }; lodi = derive2 { name="lodi"; version="0.9.2"; sha256="16xqcza87gsqi6kzx0bdv3w9zyvvppjd20rq08lc8vb75nlkx1yb"; depends=[rlang]; }; @@ -11072,12 +11526,12 @@ in with self; { logKDE = derive2 { name="logKDE"; version="0.3.2"; sha256="09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q"; depends=[pracma Rcpp]; }; logNormReg = derive2 { name="logNormReg"; version="0.3-0"; sha256="172d0y9rb7j0d3m7d22ycfip6s8hk8hlp9810d7r95ra5dr5dx8z"; depends=[]; }; logOfGamma = derive2 { name="logOfGamma"; version="0.0.1"; sha256="0r7di0l646ycfmdjk8hli6b0v7qj0i8z3i8i7rwd3fsblb2q22vd"; depends=[]; }; - logbin = derive2 { name="logbin"; version="2.0.4"; sha256="01gwfq9r2yy28iymxa402r8jp8km953cb5i60xnskcpzh8bv4rmf"; depends=[glm2 turboEM]; }; + logbin = derive2 { name="logbin"; version="2.0.5"; sha256="1v8bzhh8bm8704sv68k7dmbs0m7f656s91jhc0p7a6w7vqlmv803"; depends=[glm2 iterators itertools2 Matrix turboEM]; }; logconcens = derive2 { name="logconcens"; version="0.17-0"; sha256="0zrnyb25iyr3cm83b3xp21nipv1q0l1kp7nwjaja3173z7wwlvvr"; depends=[]; }; logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; - logger = derive2 { name="logger"; version="0.2.0"; sha256="01ggaxcmcp06qb8yfkz6zjbhmal3cyj192g2zx70x4dgmynhwrbr"; depends=[]; }; + logger = derive2 { name="logger"; version="0.2.1"; sha256="0p607da2rdrfj9sbrrq9hpqp26nyj3imd1590c13bxskqfhv0sz8"; depends=[]; }; logging = derive2 { name="logging"; version="0.10-108"; sha256="13gd40ygx586vs6xcp6clg69a92aj8zxlk1rn3xzkx8klfjimjc5"; depends=[]; }; loggit = derive2 { name="loggit"; version="2.1.1"; sha256="1fkr2fnfazxhm3pq0gysxhz6aqsdx38d017y0xbmlsg9hfgfx6q1"; depends=[]; }; logiBin = derive2 { name="logiBin"; version="0.3"; sha256="06y5bqm3j6xdr1cd607v2sqkghnd2bv6bvxc6cz8dvp8jabqa0zm"; depends=[data_table doParallel foreach iterators partykit]; }; @@ -11088,16 +11542,16 @@ in with self; { logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; }; logisticRR = derive2 { name="logisticRR"; version="0.3.0"; sha256="0i9x7rynxcybdnjqbjsny8jsl96mivzdazdgmcg72qrv8qfwpszl"; depends=[nnet]; }; logitnorm = derive2 { name="logitnorm"; version="0.8.38"; sha256="01svs20dr0f1h66j5vn3ychjlgwzak96f8p9lmzd29anjlkm9x9q"; depends=[]; }; - logitr = derive2 { name="logitr"; version="0.1.0"; sha256="08q58h88b6limqcj152jh66pywrhm0r22cqpcg4rxnl3pbm0djsa"; depends=[MASS nloptr randtoolbox]; }; + logitr = derive2 { name="logitr"; version="0.3.0"; sha256="1h956s32sq3sgyaxq3ibpkp0l30fz2qgfqj2g5xc7sia8p0v8bqj"; depends=[MASS nloptr randtoolbox]; }; loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; logmult = derive2 { name="logmult"; version="0.7.3"; sha256="10dmvvwlaw8dn6h0343d8apn7rlc2b8nys3f38x9wlvd9xhhlwxm"; depends=[gnm qvcalc]; }; lognorm = derive2 { name="lognorm"; version="0.1.9"; sha256="0mx7wgqpiprwvh5srf8z9f8glz2kgh8l15b2pydb4bvqx1m54kxa"; depends=[Matrix]; }; - logr = derive2 { name="logr"; version="1.2.1"; sha256="1qwssi41a261070xyabs2h6i5nl9jfc8czg4mnjdzwp9nrdy2xz9"; depends=[]; }; + logr = derive2 { name="logr"; version="1.2.5"; sha256="1jk9vhjlwk1d52hlnqf93xjp4imf2azpym2qhr0rf0bqhaw2kzmm"; depends=[withr]; }; logspline = derive2 { name="logspline"; version="2.1.16"; sha256="12hkdi77vkic05p2vhap025xdcg1n53ywm239v18713pihdlj63l"; depends=[]; }; lokern = derive2 { name="lokern"; version="1.1-9"; sha256="1fms79bb4y6ryzmxhpc544zh52xgd879gpcigc24bjhd7whl9nry"; depends=[sfsmisc]; }; lolR = derive2 { name="lolR"; version="2.1"; sha256="0lrmn9lzyyfr1y0i7qp6xfpdxyisbkajwg0jkrqkiw687psnh2rc"; depends=[abind ggplot2 irlba MASS pls robust robustbase]; }; - lolog = derive2 { name="lolog"; version="1.2"; sha256="1vd80ngq4558ahan1vhsql0wc578imm13fgrrgnzlrd91xncnnjf"; depends=[BH ggplot2 intergraph Matrix network Rcpp reshape2]; }; - lomb = derive2 { name="lomb"; version="1.2"; sha256="09cp9c33x14b4did8baq3hi0b3rb2nhasjz7aav03031c0fq07zj"; depends=[]; }; + lolog = derive2 { name="lolog"; version="1.3"; sha256="0lfb3d7rxssvzd70gixpmr8r8hcmxplg5yy181hdrvjsdc8w8jn4"; depends=[BH ggplot2 intergraph Matrix network Rcpp reshape2]; }; + lomb = derive2 { name="lomb"; version="2.0"; sha256="08h1qk28vvia19rjcicjf8j1f7fhvk23k79yg7bprmffhj9r6vxw"; depends=[ggplot2 gridExtra]; }; longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; }; longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; @@ -11113,9 +11567,11 @@ in with self; { lookout = derive2 { name="lookout"; version="0.1.0"; sha256="16pny894diircf7w8b7kmmjpp8j864dj9iivh1n41aafjml4xk8g"; depends=[evd ggplot2 RANN TDAstats tidyr]; }; lookup = derive2 { name="lookup"; version="1.0"; sha256="0ncmj1df64088qv0g2c0wd8n43qmi15358mz289hakg6z4h0dmyi"; depends=[]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; - loon = derive2 { name="loon"; version="1.3.4"; sha256="04pwnsc6k2wqhww329zvjsi6yb0l2gh3951m558nxkz7nx0cpjj3"; depends=[gridExtra]; }; - loon_data = derive2 { name="loon.data"; version="0.1.1"; sha256="0gcplk8qx6qm36cnxvvka1rfsjd38bhlnjvx405h0z9ivwlidsc5"; depends=[]; }; - loon_ggplot = derive2 { name="loon.ggplot"; version="1.1.0"; sha256="11s61ci5mv28dqfx7v9wzz2sszn2290bz67lpkzmgnzghbsn8bhl"; depends=[GGally ggmulti ggplot2 gridExtra loon rlang scales]; }; + loon = derive2 { name="loon"; version="1.3.7"; sha256="0fh8ivdzdv83f5nky9sm4h0vqggcbikxbbix9b9gxd2h2w5wz73y"; depends=[gridExtra]; }; + loon_data = derive2 { name="loon.data"; version="0.1.3"; sha256="0sdld3yggjadykqaljf0p4cymy2c47yaxjphc6jwyragzpv4awzw"; depends=[]; }; + loon_ggplot = derive2 { name="loon.ggplot"; version="1.2.1"; sha256="0vjabv0jlr70lpg1h2gms8ffh8kw548xpaacx4xqwgc32q9i64fn"; depends=[GGally ggmulti ggplot2 gridExtra loon rlang scales]; }; + loon_shiny = derive2 { name="loon.shiny"; version="1.0.0"; sha256="0x3qhq7wsh0ns8n0pf2z27hvhjv6snyagllmsfxr80cq8nbj7iwj"; depends=[base64enc colourpicker gridExtra loon loon_ggplot shiny]; }; + loon_tourr = derive2 { name="loon.tourr"; version="0.1.2"; sha256="1n8abzwkm15kpxs6rnzw5d138595qvhs3i671wn9rn35bp1gxs4k"; depends=[loon loon_ggplot MASS tibble tourr]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; loose_rock = derive2 { name="loose.rock"; version="1.2.0"; sha256="13p3mp8m2in3cbcwgj42hgzrwxmgalc2v0z3r1zn1n77iqjvcd7r"; depends=[digest dplyr futile_options ggplot2 httr MASS reshape2]; }; lordif = derive2 { name="lordif"; version="0.3-3"; sha256="1yby9fvzdi1dzvzp6d6h144k1p9nfacd8l5bd66dmhnc8sp2nlx5"; depends=[mirt rms]; }; @@ -11131,9 +11587,11 @@ in with self; { lpbrim = derive2 { name="lpbrim"; version="1.0.0"; sha256="1cbkzl23vgs9hf83ggkcnkmxvvj8867k5b9vhfdrznpqyqv1f2gp"; depends=[Matrix plyr RColorBrewer]; }; lpc = derive2 { name="lpc"; version="1.0.2.1"; sha256="1g1dzm7pcrbrdk1dmhbdhj58j69dzar41al3i8q4gysf3adqzsvv"; depends=[]; }; lpdensity = derive2 { name="lpdensity"; version="2.2"; sha256="0ibr4js9iwwnzp872n56xbzap8dpz9zjv4y5alcc8rdh0y55sa7r"; depends=[ggplot2 MASS]; }; + lphom = derive2 { name="lphom"; version="0.3.0-7"; sha256="19dbg8f44gsm7dnm89pzs42qq36jxjq7bcds0xg2j8vc4r5dhs9j"; depends=[lpSolve Rsymphony]; }; lpint = derive2 { name="lpint"; version="2.0"; sha256="0p1np8wlfbax0c7ysc5fs9dai8s00h1v0gan89dbd6bx06307w2r"; depends=[]; }; lpirfs = derive2 { name="lpirfs"; version="0.2.0"; sha256="1jn2faqj7szsfc0bicgym493y4cyncbg93rmcc3yv59b0rbxhc8m"; depends=[doParallel dplyr foreach ggplot2 ggpubr gridExtra lmtest plm Rcpp RcppArmadillo sandwich]; }; - lpme = derive2 { name="lpme"; version="1.1.1"; sha256="0si90nkgl8bqk8yvd2igdsrngiwqh8891072pfpzipifnd0f5448"; depends=[decon flexmix locpol Rcpp RcppArmadillo]; }; + lpl = derive2 { name="lpl"; version="0.11"; sha256="11w2cr5n72p4wds5dm039rdinhvxjfqvrmisksfpf47jddjxhm42"; depends=[MASS survival]; }; + lpme = derive2 { name="lpme"; version="1.1.2"; sha256="1b0w5ji8hjayni1sh5id193cmanf6n11p16fijkxln4sv4lks4aw"; depends=[decon flexmix locpol Rcpp RcppArmadillo]; }; lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; lpridge = derive2 { name="lpridge"; version="1.0-8"; sha256="0jk4l95z9rcdqkc8lpp4sf1mg2dqj67rhqw1iafrxy5lx4jfaqqx"; depends=[]; }; lqmm = derive2 { name="lqmm"; version="1.5.5"; sha256="15kyfpbvdgyxl6gjqinx79zq03axg36qgaqfc6zq4blyjlhj6i3c"; depends=[nlme SparseGrid]; }; @@ -11142,7 +11600,7 @@ in with self; { lrgs = derive2 { name="lrgs"; version="0.5.4"; sha256="0mf6wqlv21z68w81hvpmhgngvdsklf3x2678d9c9lxfmqmpv4a7y"; depends=[mvtnorm]; }; lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; }; lsa = derive2 { name="lsa"; version="0.73.2"; sha256="1a33irqa6qvbc02z12rgbgv8kxq2gmahy7j5bg8b23lvvaxif06b"; depends=[SnowballC]; }; - lsasim = derive2 { name="lsasim"; version="2.0.2"; sha256="12v5g7nhip46647al5l1k968yxp474988ja90v0s3p0rrh02l1rq"; depends=[mvtnorm]; }; + lsasim = derive2 { name="lsasim"; version="2.1.1"; sha256="18xjns1sgzmmy3mf162kcq7y106gbywzmsfd4z9xl8d8wvwqa7b7"; depends=[cli mvtnorm polycor]; }; lsbclust = derive2 { name="lsbclust"; version="1.1"; sha256="1pbai58pfvhfcrd0nj13d54vrn9wrx2xapqhgqa1pkrjwbk5amj7"; depends=[clue doParallel foreach ggplot2 gridExtra mvtnorm plyr Rcpp reshape2]; }; lsbs = derive2 { name="lsbs"; version="0.1"; sha256="14aq80zg89lq7hffv1v1m4n7hbzqzxkazcga4y2fq40ij3v7kv6n"; depends=[ks Matrix numDeriv]; }; lsdbc = derive2 { name="lsdbc"; version="0.1.0"; sha256="1dk07zlvwwfhlll21ql264gx94v3jvgidy3yvxidwmhnyc1vx80x"; depends=[]; }; @@ -11157,12 +11615,12 @@ in with self; { lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; }; lspls = derive2 { name="lspls"; version="0.2-2"; sha256="1cmffkyc881659l9m1miwhr3jfpwb0xb9n5chg317vcm8l9r4wcn"; depends=[pls]; }; lsplsGlm = derive2 { name="lsplsGlm"; version="1.0"; sha256="1qh68r033fwq1hc19h2srl1k6znvvvrcp38ghxadsksjfxllvniy"; depends=[]; }; - lsr = derive2 { name="lsr"; version="0.5"; sha256="0q385a3q19i8462lm9fx2bw779n4n8azra5ydrzw59zilprhn03f"; depends=[]; }; + lsr = derive2 { name="lsr"; version="0.5.1"; sha256="1vx3wy7s8wr79almwn1c24x91c5sxndpbi2hi7fa6xa8w7xl3lzn"; depends=[]; }; lss2 = derive2 { name="lss2"; version="1.1"; sha256="1rkv26zq36zyh891xkkllxphwplljmzpy15g619x1w4qvsajyyg8"; depends=[quantreg]; }; ltable = derive2 { name="ltable"; version="1.0"; sha256="1sx6bknbfkays899yq7wqpvc7izz757smaw9g9i7wii7d7a75plr"; depends=[]; }; ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.1-1"; sha256="1qrgzwx5l58qf5rfp1knxc84r0g943q5sdr3ky74zzwpnmrf2vf7"; depends=[MASS msm polycor]; }; - ltmix = derive2 { name="ltmix"; version="0.2.0"; sha256="1p0p904lvhxwwj3vn0rrl6ydygnldgxqpk82y3b9p2ywvvfh86yv"; depends=[gtools pracma]; }; + ltmix = derive2 { name="ltmix"; version="0.2.1"; sha256="03i0gr79xiqnny57g0y9w5dfpw51gqhrkff2rh8rggsni20pzm1h"; depends=[gtools pracma]; }; ltmle = derive2 { name="ltmle"; version="1.2-0"; sha256="1mqrf77319cjs3q48iigrkjc3rjibz7qyij49a7l0nim3c1hd0b0"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; @@ -11172,12 +11630,13 @@ in with self; { lubridate = derive2 { name="lubridate"; version="1.7.10"; sha256="1s653d6rnpf9bkynxmbq4fdjdcz7r9ma19aph8f5y9ck70his4hm"; depends=[generics Rcpp]; }; lucas = derive2 { name="lucas"; version="1.0"; sha256="1ws35f2pq2y7nnik40nj4qpz1d499gfc5isr1409pwy6r5knb78q"; depends=[DBI plyr rpostgis RPostgreSQL]; }; lucid = derive2 { name="lucid"; version="1.8"; sha256="1dhbyr0l7cp5r0r7xdgqqxlix5hhk0v4v0zghd904dvfyaz2zdwi"; depends=[nlme]; }; - ludic = derive2 { name="ludic"; version="0.1.8"; sha256="1yvv3h7arm8hp89j9nr5vdl8ahxcpggi2qq431l7xbw9jka41qdp"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; + ludic = derive2 { name="ludic"; version="0.2.0"; sha256="08j6y65dxalyrcp14mry7a393if42lfh8smkq1q70dsdk6645j7d"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo rootSolve]; }; lue = derive2 { name="lue"; version="0.2.1"; sha256="0is5rd1dz91bzphmfbbzi3s6rgc5g9qza2r26k70xs67dgn0qbjq"; depends=[ncdf4 raster]; }; lulcc = derive2 { name="lulcc"; version="1.0.4"; sha256="00ymbp20kbjyzrsrxa262y0y7fj4jgsbqf56aapb657xvafxvy5q"; depends=[lattice raster rasterVis ROCR]; }; - lumberjack = derive2 { name="lumberjack"; version="1.2.0"; sha256="1m2xngsnf4iwwm5baxdaszb10wjp1zmszlzlfs4acr6lwzsq0fvh"; depends=[R6]; }; + lumberjack = derive2 { name="lumberjack"; version="1.2.1"; sha256="0ds62s7ax1s9b5vss3a1c415zrlj2l8h7bfys2cvx59h4phiaiaj"; depends=[R6]; }; lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; }; lutz = derive2 { name="lutz"; version="0.3.1"; sha256="15b8gzwykxyqycjba319jpsbny07j8ny9y4lnrg8mcf488ycz57y"; depends=[lubridate Rcpp]; }; + luz = derive2 { name="luz"; version="0.1.0"; sha256="0mryayhsz3xzj32la6sj4nlp07gxb15df4vidiv6jhgz3zads1dl"; depends=[cli coro ellipsis fs generics glue magrittr prettyunits progress purrr R6 rlang torch zeallot]; }; luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; }; lvec = derive2 { name="lvec"; version="0.2.2"; sha256="0n1l26n4khlalqd0b9bi7vc3kr5jh6mr56ca0rmnnl6bl9742nr5"; depends=[BH Rcpp]; }; lvm4net = derive2 { name="lvm4net"; version="0.3"; sha256="1iq93mrdhymdixnk7y7rkibm3cqljl4y9qkjq4mzkcwcp4960y5q"; depends=[corpcor ellipse ergm glmmML igraph MASS mvtnorm network]; }; @@ -11185,7 +11644,7 @@ in with self; { lvmisc = derive2 { name="lvmisc"; version="0.1.1"; sha256="06ry1azfpqdh1hblhnc47n9265dkzhm96rajl8y7xnvqmv6ad8jj"; depends=[cowplot dplyr ggplot2 glue purrr rlang rsample tibble tidyselect vctrs]; }; lvnet = derive2 { name="lvnet"; version="0.3.5"; sha256="1wqqxavs2s0hmlifyaa1jrlc8hj4z72fkgjckkmh9m2r4jp9zy0g"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; - lwgeom = derive2 { name="lwgeom"; version="0.2-6"; sha256="1733iwinn426bcmgjxp4j0scvbz35rvqkanmw7g7f47l6j7w14vn"; depends=[Rcpp sf units]; }; + lwgeom = derive2 { name="lwgeom"; version="0.2-7"; sha256="1qgszbw03haqfjdc07ivkg8r0yd50ldkiqq27ppkaibw7mgiak5k"; depends=[Rcpp sf units]; }; lwqs = derive2 { name="lwqs"; version="0.5.0"; sha256="11hkz3b3sgm6v30gwaq463klljjf6c4qx26a5ccc1wl6r439gxqp"; depends=[data_table gamm4 ggplot2 gridExtra gWQS plyr]; }; lxb = derive2 { name="lxb"; version="1.5"; sha256="16x1mvhxqhvibzmv6mlqcmkgic2sha1xagf7r2azmn4z8x1m9w6n"; depends=[]; }; lymphclon = derive2 { name="lymphclon"; version="1.3.0"; sha256="1jns41sk2rx1j3mg06dzy434k30gpfhbkn6s47fmyv1y8701vfl0"; depends=[corpcor expm MASS]; }; @@ -11193,35 +11652,37 @@ in with self; { m2r = derive2 { name="m2r"; version="1.0.2"; sha256="0vwvpalap4z5x2004c92n0ka7i4l64ry5n8pmxs4vjpd8fyx91gc"; depends=[gmp memoise mpoly Rcpp stringr usethis]; }; m61r = derive2 { name="m61r"; version="0.0.2"; sha256="0l2c2b6bvf79lrw586vfj3nrw9l9w8zk1hfhg3iqb50ql02c95an"; depends=[]; }; mAr = derive2 { name="mAr"; version="1.1-2"; sha256="0i9zp8n8i3fxldgvwj045scss533zsv8p476lsla294gp174njr7"; depends=[MASS]; }; - mBvs = derive2 { name="mBvs"; version="1.4"; sha256="1dljdz6kicfnwlx2rxlxgbvi3z9g3dizgrp6zza7mz9djykhdc60"; depends=[]; }; + mBvs = derive2 { name="mBvs"; version="1.5"; sha256="1fmi4ap55jl06swivspk24acwf5n4wd9agiw330z15x427j579s3"; depends=[]; }; mDAG = derive2 { name="mDAG"; version="1.2.2"; sha256="0k85sl0jmpcpiz92cz6x3kd8jc6yyfv9z4wm1kyaikcf5q4qlad4"; depends=[bnlearn logistf mgm nnet pcalg Rcpp RcppArmadillo]; }; mExplorer = derive2 { name="mExplorer"; version="1.0.0"; sha256="1563d9r7f25vw5vsph21z3dwz9n40dpaiyx28ay1bbp5i1x2l3rb"; depends=[nnet qusage]; }; - mFLICA = derive2 { name="mFLICA"; version="0.1.1"; sha256="0r7jpbshmb2p090f2bd7f458rlp2gck1wv7yspf1v55xxjwb6r5x"; depends=[dtw ggplot2]; }; + mFLICA = derive2 { name="mFLICA"; version="0.1.3"; sha256="0q9d4x6imrcayk0qcdwp6rigk9b741xc64vbiggmynzyc1kjwr4w"; depends=[dtw ggplot2]; }; mFilter = derive2 { name="mFilter"; version="0.1-5"; sha256="0anc93mciq8j64knd0i38sfgv10w1gd375wnfzn1fq8sj3lby7kb"; depends=[]; }; mGSZ = derive2 { name="mGSZ"; version="1.0"; sha256="08l98i75h2h8kx9ksvzp5qr8jhf0l6n4j7rg8fcn7hk8chn8v5zh"; depends=[Biobase GSA ismev limma MASS]; }; mHG = derive2 { name="mHG"; version="1.1"; sha256="1rz5ncrvvv9h9grls15apa63v2nh9j87fmp4mwjjil37jx6a5zki"; depends=[]; }; mHMMbayes = derive2 { name="mHMMbayes"; version="0.1.1"; sha256="0dwywrnzdzkq48x2li9waj1yrm9r5b3qnksad42kf1bm28r1mdl5"; depends=[MCMCpack mvtnorm Rdpack]; }; mMPA = derive2 { name="mMPA"; version="1.2.0"; sha256="0g4zjknz52fpk7f436j95aw93aa8q2jwcrb1pqkm294kr276nnd9"; depends=[]; }; mQTL = derive2 { name="mQTL"; version="1.0"; sha256="0k80xvkr0b0mp3bj2s558fjxi2zf4k7ggnw6hsjm8lr84i108dks"; depends=[MASS outliers qtl]; }; - mRMRe = derive2 { name="mRMRe"; version="2.1.0"; sha256="1m41859sa0nd4hdnsq3ir337834cpmgg564f6ph57dmmwz0wa8zy"; depends=[igraph survival]; }; + mRMRe = derive2 { name="mRMRe"; version="2.1.2"; sha256="183wfy1sjbbinrfg8wjvwb18pnypkx3ws0k7xvcm37x8rjrkr6m5"; depends=[igraph survival]; }; mRpostman = derive2 { name="mRpostman"; version="1.0.0"; sha256="1zcfkzsqfhlxmqyvz3n4lssvi2pg3q7x84y6khqlgwncg3bhp56x"; depends=[assertthat base64enc curl magrittr R6 rvest stringi stringr xml2]; }; mSTEM = derive2 { name="mSTEM"; version="1.0-1"; sha256="0mh09mqqpq9k8jrxs9d39009idld3b4y98ik75czdy580jmdg7mm"; depends=[doParallel foreach latex2exp]; }; mSimCC = derive2 { name="mSimCC"; version="0.0.1"; sha256="1f15r214srcdb4yacmy4hq890a674iqd2s7bry5dk20k46qdl026"; depends=[doParallel foreach]; }; mStats = derive2 { name="mStats"; version="3.4.0"; sha256="196fjnld26dmirga4mghlvsrj4fgnw08wdg77masxm15kpvm1x1d"; depends=[]; }; maGUI = derive2 { name="maGUI"; version="3.0"; sha256="1ak2sa6y766v5zh54bf7j9hklmkia40nsdchyw834ybb9ijjyjsm"; depends=[Biobase gWidgets2 gWidgets2RGtk2 impute limma Rgraphviz RGtk2 ssize]; }; maSAE = derive2 { name="maSAE"; version="2.0.3"; sha256="0453rvfhi4zvjhbkjammy81gxi6ax75gs8iqpnphbrv60agz0bjc"; depends=[]; }; + maat = derive2 { name="maat"; version="1.0.2"; sha256="1fw1kk59qz86vahwrk8xyifd8lyag7xch2mvhr7jk5wsbk7clrcl"; depends=[diagram MASS Rdpack readxl TestDesign]; }; mable = derive2 { name="mable"; version="3.0.1"; sha256="14vv0dhfrsbxqs8nmisx1ka9r4h9nhgj4mjqnakwchgr58jhpwxb"; depends=[doParallel foreach icenReg iterators survival]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; machina = derive2 { name="machina"; version="0.1.6"; sha256="009mzqb5jgnilj9b5ldmm5600008bljlqacm8jjxvqsfnfdfg8zv"; depends=[DT httr jsonlite lubridate rhandsontable xts]; }; - macleish = derive2 { name="macleish"; version="0.3.6"; sha256="0n33di2f42b2gn8qhs49j8f99l8qgxzb9lqnv50hc9zxgli5ds1v"; depends=[dplyr etl lubridate readr sf]; }; + macleish = derive2 { name="macleish"; version="0.3.8"; sha256="11ilh3zya06slkkls2hdb1j7gz42zi1l5yfazzdyrm5kc4y74imm"; depends=[dplyr etl lubridate readr sf]; }; maclogp = derive2 { name="maclogp"; version="0.1.1"; sha256="1fbwv4j4mb7zkyc5vspq7k17pwr49dbvqkssda54ggcf1nbqykmb"; depends=[BMA plot_matrix rlist]; }; - mactivate = derive2 { name="mactivate"; version="0.6.5"; sha256="0mnnnlq4x3dzl0b0frn2jmqjk2n4vw6cq0hh1kmf5ndh8rc298c9"; depends=[]; }; + mactivate = derive2 { name="mactivate"; version="0.6.6"; sha256="0qqhniq0wdhazhfiiw7g2b0v8jkc8jl2m117k1c6gnajg8gs1ymn"; depends=[]; }; maczic = derive2 { name="maczic"; version="0.2.0"; sha256="0r60q34ff38cdxf20b1f07wc4rbac1ch0chri36x221k2cnpxnhh"; depends=[BB emplik MASS mathjaxr mediation pscl sandwich survival]; }; mada = derive2 { name="mada"; version="0.5.10"; sha256="1hllv371dm307nkpld0aszjyxfgnajr7gb9zwh40pyzw4q4a2rqb"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; - maditr = derive2 { name="maditr"; version="0.7.4"; sha256="1b7vvg03xfcmizahlnjbxk67xmmgqi96bvp16d135jqgfijmg35f"; depends=[data_table magrittr]; }; + madgrad = derive2 { name="madgrad"; version="0.1.0"; sha256="0cxf1b57cl7qwax60wv4jvcac762ara2i18nb1fcjp954mwgwnlb"; depends=[rlang torch]; }; + maditr = derive2 { name="maditr"; version="0.8.2"; sha256="1nmg5pgz4pyck5f66dcrd4hb6v1fg45w4ki9sriz375iskv3as7h"; depends=[data_table magrittr]; }; madness = derive2 { name="madness"; version="0.2.7"; sha256="0vcpydqnpmg9rvvzyjyqvd3qgs42n8cr9cafai51989v2w2bcf85"; depends=[expm Matrix matrixcalc]; }; madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; }; madrat = derive2 { name="madrat"; version="1.64.5"; sha256="1gccfpzbm5cq9q288k86mq0madh8x9nhw06hrrcfjj5waqhi30lj"; depends=[assertthat digest magclass rlang spam stringr]; }; @@ -11232,27 +11693,29 @@ in with self; { magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.2.1"; sha256="1ba8psg3ja8b69s1afywsjz5sfljryhk5vvq1n4dzm1gsz6c772l"; depends=[celestial mapproj MASS plotrix RANN RColorBrewer sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="2.7.2"; sha256="1ckp85wk9lj6jjm92ww4mg1r4h4zm2cm68y6fyb1hz4mr3nihmji"; depends=[curl magrittr Rcpp]; }; - magickGUI = derive2 { name="magickGUI"; version="1.2.2"; sha256="1acb0fcsp07jf7g0jak66bflq37wv588dgya29pw6gy01g0ch084"; depends=[magick]; }; - magmaR = derive2 { name="magmaR"; version="1.0.0"; sha256="1xz79352azganmqncpy79pddina7908jdglswvcn7nxqxk4nvs9i"; depends=[crul jsonlite]; }; + magick = derive2 { name="magick"; version="2.7.3"; sha256="0h942bn7wfnzbbgq9hrs75c7igmg5r1c5sad2v0znhza4cp7p1w3"; depends=[curl magrittr Rcpp]; }; + magickGUI = derive2 { name="magickGUI"; version="1.3.0"; sha256="114l5mga9x3vn9qqydyq1v75gqldh4p6m4i8ak0xw3v7p6wsf8gn"; depends=[magick]; }; + magmaR = derive2 { name="magmaR"; version="1.0.1"; sha256="092yd4p90s16prrd4lxswlz182i1bjy0f1yn83hsjb2n8q5vzgvl"; depends=[crul jsonlite]; }; magree = derive2 { name="magree"; version="1.1"; sha256="0q0v1mx4k1hry0l21611z9jx967l89xpjddvw2v1v9c3kl11kfi6"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="2.0.1"; sha256="0pxd99fvg406whqsk9wh756rayrwh84xn3h44zmlpcy23kanbhkm"; depends=[]; }; - maic = derive2 { name="maic"; version="0.1.2"; sha256="0cvb3s67skzkqkh1hm007wvzgx9zg27bwwzw39sq4z0kyafjvg28"; depends=[Hmisc matrixStats weights]; }; + maic = derive2 { name="maic"; version="0.1.3"; sha256="1s6rq3v0dk0fm1csq0w8bb52kldaimmsgprmcjj1il6pr2936d3a"; depends=[Hmisc matrixStats weights]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; mailR = derive2 { name="mailR"; version="0.4.1"; sha256="1bfh3fxdqx9f9y3fgklxyslpcvhr9gcj7wsamaxzgrcsaxm8fdlw"; depends=[R_utils rJava stringr]; }; - mailmerge = derive2 { name="mailmerge"; version="0.2.0"; sha256="0lqixyl5faypp1vhcfsy3fxr58dg7zphwck2w6cbbazi102xqyh5"; depends=[commonmark dplyr fs glue gmailr googledrive googlesheets4 lifecycle magrittr miniUI purrr rmarkdown rstudioapi shiny withr]; }; + mailmerge = derive2 { name="mailmerge"; version="0.2.2"; sha256="0gn21gvw0b4i3agzmcv0c3f3qxh0pai3yf7hlpdfzk8c2slgww9v"; depends=[commonmark dplyr fs glue gmailr googledrive googlesheets4 lifecycle magrittr miniUI purrr rmarkdown rstudioapi shiny withr]; }; mailtoR = derive2 { name="mailtoR"; version="0.1.0"; sha256="0mnzblhy2vbxkf0k49bw1g08jw84s59zxbjrva2j2q347wzf4rgk"; depends=[glue htmltools]; }; majesticR = derive2 { name="majesticR"; version="0.1.1"; sha256="0x23p4js9cfnj8c33cp0fql5pvs4fn4frbbzpq85mxjhiifkxxpf"; depends=[jsonlite urltools]; }; makeFlow = derive2 { name="makeFlow"; version="1.0.2"; sha256="0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw"; depends=[dplyr RColorBrewer]; }; makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; makedummies = derive2 { name="makedummies"; version="1.2.1"; sha256="062rvijhy2dybpgxzp44cg46bfyb8lp9yasv3mhskhf3yg717sqp"; depends=[tibble]; }; + makemyprior = derive2 { name="makemyprior"; version="1.0.0"; sha256="0l4xpalw13x07fr1g9h6dfcmb16dk712pp70mnshqjhy1vlq2ajp"; depends=[ggplot2 knitr MASS Matrix rlang rmarkdown shiny shinyBS shinyjs testthat visNetwork]; }; maketools = derive2 { name="maketools"; version="1.2.0"; sha256="1i2s48s0qfk9nwkkbx5hr0q7b0c8xziyrsg1klianmk9jqfngg36"; depends=[sys]; }; malan = derive2 { name="malan"; version="1.0.2"; sha256="0qwf0r2gwpb93gzvyp8vaw7j6rhghr6nbrfp8xw876n5j5b9jhj3"; depends=[dplyr igraph magrittr Rcpp RcppArmadillo RcppProgress tibble tidygraph]; }; malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; malariaAtlas = derive2 { name="malariaAtlas"; version="1.0.1"; sha256="0k0406pn65ars4d6zlirfdd7z3rl2z82vsx5p97gmxnjjp6gjdpa"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; + malaytextr = derive2 { name="malaytextr"; version="0.1.1"; sha256="1ra6grjapmx2yiy50prfxk87vx9p68i8b2ns93y9sj0nh1vdybmw"; depends=[dplyr magrittr rlang stringr]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; - mand = derive2 { name="mand"; version="0.1"; sha256="0hrm7icc3akr98s4icn4yk4a05l547x2y7dyihzj4svwcqxgfh0r"; depends=[caret imager msma oro_dicom oro_nifti]; }; + mand = derive2 { name="mand"; version="1.0"; sha256="0mjjzrij1yizdyv5z5jsf24xhdck478iwpjx5x4mz0mhxp3nazs3"; depends=[caret imager msma oro_dicom oro_nifti]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; manet = derive2 { name="manet"; version="2.0"; sha256="1dnacgkdjmn7yiqk71qx5jgfipbpvqfdnrdd8wm0b9p8kgw4x7n4"; depends=[combinat igraph mclust MCMCpack]; }; mangoTraining = derive2 { name="mangoTraining"; version="1.1.1"; sha256="15m9n5258yjffzhnrgp395g3iiv1f0qlv0cdsdgspmb83m5p3lbb"; depends=[tibble]; }; @@ -11260,14 +11723,14 @@ in with self; { manhplot = derive2 { name="manhplot"; version="1.1"; sha256="17yw10gpfp6bqmilb09v61jd2amz6cv1z38si4nqnhbvmac065qd"; depends=[ggplot2 ggrepel gridExtra reshape2]; }; manifestoR = derive2 { name="manifestoR"; version="1.5.0"; sha256="0b4x4ampzmxcmlcyvl683rwynzwjg1cyx5zpamgy8027fh376zcp"; depends=[base64enc dplyr DT functional htmltools htmlwidgets httr jsonlite magrittr NLP psych purrr readr tibble tidyselect tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; - manipulateWidget = derive2 { name="manipulateWidget"; version="0.10.1"; sha256="1vi71sjh7z1a880wffk8qqw7iysvk42q78giqxmm2sqz2a912qlx"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny webshot]; }; - manymodelr = derive2 { name="manymodelr"; version="0.3.5"; sha256="0i8wakdqfi3fi2k4fl3cxmsifis5b914wl2rdavwhx4pw99ck9y3"; depends=[caret dplyr e1071 ggplot2 lme4 Metrics]; }; - maotai = derive2 { name="maotai"; version="0.1.9"; sha256="0cidcvcnsnzzj02s5iv4y3d4j3nxvkbh9wrrih2xmadhfbjbvm6y"; depends=[cluster dbscan fastcluster labdsv Matrix RANN Rcpp RcppArmadillo RcppDist Rdpack RSpectra Rtsne shapes]; }; + manipulateWidget = derive2 { name="manipulateWidget"; version="0.11.0"; sha256="0iysgl6ab8fvg1xxdx6hr3swqwbkfqzjkk4x5sbvmawbl2a395gj"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny shinyjs webshot]; }; + manymodelr = derive2 { name="manymodelr"; version="0.3.6"; sha256="0a444kn38qsc197f6625ds61c1aww1kwh9dvh3jppabdf691pnv5"; depends=[caret dplyr e1071 ggplot2 lme4 Metrics]; }; + maotai = derive2 { name="maotai"; version="0.2.1"; sha256="1l4379slxshk7hrg2mjrihr2k5cq1rf112m6l9pqsr5aisvjq0ab"; depends=[cluster dbscan fastcluster labdsv Matrix RANN Rcpp RcppArmadillo RcppDist Rdpack RSpectra Rtsne shapes]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; - mapSpain = derive2 { name="mapSpain"; version="0.2.3"; sha256="1lcis5mxi46qgqk751f95a1hh00ydcxi7rhwpmrrq75cfapzd69r"; depends=[countrycode giscoR leaflet png raster sf slippymath]; }; + mapSpain = derive2 { name="mapSpain"; version="0.3.1"; sha256="0zrfavc76y40fsh6xxy3czg08nzaj8r7dmxsp1bgx4zka4d632qv"; depends=[countrycode giscoR leaflet png rappdirs raster sf slippymath]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapaccuracy = derive2 { name="mapaccuracy"; version="0.1.0"; sha256="1rrnbmar8s48kww2x9qjlm68xs55mbc8cnms2crdsaah7787s6aa"; depends=[assertthat gtools reshape]; }; - mapbayr = derive2 { name="mapbayr"; version="0.4.1"; sha256="1zblfi4k07559cacd1bxi1h0mpk4phqljcaxc4bg5pjnb0b6l1wz"; depends=[dplyr ggplot2 magrittr mrgsolve optimx purrr rlang stringr tibble tidyr]; }; + mapbayr = derive2 { name="mapbayr"; version="0.5.0"; sha256="12k8n3fcm9km14ih4vspv4p314yqqim2v3hgcd4h98jwsp3ls6aq"; depends=[dplyr ggplot2 magrittr mrgsolve optimx purrr rlang stringr tibble tidyr]; }; mapboxapi = derive2 { name="mapboxapi"; version="0.2"; sha256="0rqpynin27vvwyjjv0c22mhrpsq4cgkkvhfhf24aqbkzfay92905"; depends=[aws_s3 curl dplyr geojsonsf httr jsonlite leaflet magick protolite purrr rlang sf slippymath stringi tidyr]; }; mapboxer = derive2 { name="mapboxer"; version="0.4.0"; sha256="0f873js87dgk8nqnhpxh88svvsbnk81vkm7gycb62mkr4xqsgqs7"; depends=[geojsonsf htmltools htmlwidgets magrittr purrr yaml]; }; mapcan = derive2 { name="mapcan"; version="0.0.1"; sha256="1a4135wc1h4nzcv6xq0bg75i744wyq8p7q0ix7y2x2gb6s35w46k"; depends=[dplyr ggplot2 magrittr]; }; @@ -11278,21 +11741,22 @@ in with self; { mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapi = derive2 { name="mapi"; version="1.0.1"; sha256="0qfwxrd0ya5amw7f96pfxf3f8m97s7vhaz62clqn083mw8ddaz2l"; depends=[data_table pbapply Rcpp sf]; }; mapmisc = derive2 { name="mapmisc"; version="1.8.0"; sha256="0xp2ns6j8craz74jw4gjjhzkfbbihcy8d9dg1i08hiws743kzd8s"; depends=[raster sp]; }; - mapping = derive2 { name="mapping"; version="1.2"; sha256="0y33rh5pjqblydvcr67q9sb3vpqksv26im9cvayhsz5j7q6q98ax"; depends=[cartography curl dplyr geojsonio ggplot2 htmltools httr jsonlite leaflet leafpop leafsync mapview rgdal sf stringr tmap tmaptools viridisLite]; }; + mapping = derive2 { name="mapping"; version="1.3"; sha256="1in4fjdiass73fdh3y937c600bdbv8gwjzxb5wj07wkc76jxb5ba"; depends=[cartography curl dplyr geojsonio ggplot2 htmltools httr jsonlite leaflet leafpop leafsync mapview rgdal s2 sf stringi stringr tmap tmaptools viridisLite]; }; + mappings = derive2 { name="mappings"; version="0.1"; sha256="1f7m6nbdzdcxsk4m8rh8fzrck8pzxl2lgfz5c6wramwmp8rxczzb"; depends=[]; }; mapplots = derive2 { name="mapplots"; version="1.5.1"; sha256="18s2y66f8vi8g2r8a25zbgp2xm079r8v8qxv0w71h8krycs6vs9p"; depends=[]; }; mappoly = derive2 { name="mappoly"; version="0.2.3"; sha256="1swnll428dxd8v1sa42m6x9azr5g7jxvk4q37nzsinwd7b4cw8pa"; depends=[cli crayon dendextend dplyr fields ggplot2 ggpubr ggsci magrittr plotly princurve Rcpp RCurl reshape2 rstudioapi scatterplot3d smacof vcfR zoo]; }; mapproj = derive2 { name="mapproj"; version="1.2.7"; sha256="0nscsfq8md6ri9258xz57c3dj81wdl6kdwf4a9qcrwwbn20i427h"; depends=[maps]; }; mapr = derive2 { name="mapr"; version="0.5.2"; sha256="0qc1zqa2yqgy777wbm6lj37vzaaxaz0gdimr62wv9fyddkbkshk4"; depends=[data_table ggplot2 gistr jsonlite leaflet maps RColorBrewer sp spocc]; }; - maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; + maps = derive2 { name="maps"; version="3.4.0"; sha256="0ispkx1szgwxhr0zzhdzgqqwcgc6psg7vry4sj4rb89w76rcq63r"; depends=[]; }; mapsFinland = derive2 { name="mapsFinland"; version="0.1.1"; sha256="0kx9r28lvc6bbl478i9gyy58kbp5hi7akysyld87fxk5x0601j19"; depends=[]; }; mapsRinteractive = derive2 { name="mapsRinteractive"; version="1.0.1"; sha256="03x5mza9y5kdqshma0k7bynmd3fffayy1j243m5bhw7ln85ws73x"; depends=[gstat raster rgdal rgeos sp]; }; - mapsapi = derive2 { name="mapsapi"; version="0.4.8"; sha256="13v2hgngbxs6v7cxb8nnsa3i96a0rldvcx9xrx5l6l584vvs8j9f"; depends=[bitops magrittr RgoogleMaps sf stars xml2]; }; - mapsf = derive2 { name="mapsf"; version="0.2.0"; sha256="0g1agahjdplqa0ii0c7949b7a2dbc30xw4mr4lsp41ngcwjl8yc6"; depends=[classInt Rcpp sf]; }; - maptiles = derive2 { name="maptiles"; version="0.1.3"; sha256="1krdq9ycaknkcjk7zhms34c51dfkfmfq23ivb499sq6mzh0x5s4l"; depends=[curl png sf slippymath terra]; }; - maptools = derive2 { name="maptools"; version="1.1-1"; sha256="0pn4gwh2rl6pfh2vbc7ln86kzlg22cfpd02z95j7zpjidz2mva8l"; depends=[foreign lattice sp]; }; + mapsapi = derive2 { name="mapsapi"; version="0.5.0"; sha256="0cf9ycj1a0vik0j10nif69n7rirrvkan9md55mgicw4wmcn1rs6i"; depends=[bitops magrittr RgoogleMaps sf stars xml2]; }; + mapsf = derive2 { name="mapsf"; version="0.3.0"; sha256="0kyqzpk14k4qs4vqlzpsbl29wfkspd3c95mqvlzh1a8shw70jfrn"; depends=[classInt Rcpp sf]; }; + maptiles = derive2 { name="maptiles"; version="0.3.0"; sha256="025n9fpl55n9wnslpjqr4z5y0q4mn68dplb3fm7wyn968kw7sbig"; depends=[curl png sf slippymath terra]; }; + maptools = derive2 { name="maptools"; version="1.1-2"; sha256="0fa4a43zax8gn3jdp4ngqav61x4g6l33bg9wzqbngkbjhipck59r"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-7"; sha256="0f85i3vwr5rvz261z6j7x15gsahxrq4qqddfb0qyhypgihvwh857"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; - mapview = derive2 { name="mapview"; version="2.9.0"; sha256="145n1shc8bjvm2awvnxd8884mi5bxjqymlkvz1vv3gkwwssv430p"; depends=[base64enc htmltools htmlwidgets lattice leafem leaflet leafpop png raster satellite scales sf sp webshot]; }; + mapview = derive2 { name="mapview"; version="2.10.0"; sha256="1amscd7h5c26r8w6bp68a855vy7y8h84z7dvcc8vz6jbcln915xm"; depends=[base64enc htmltools htmlwidgets lattice leafem leaflet leafpop png raster satellite scales servr sf sp webshot]; }; mar1s = derive2 { name="mar1s"; version="2.1.1"; sha256="1ljkvgxrramfx1rnp2rg6516mjxaa6s96amrnmqymnyjz7wlf37l"; depends=[cmrutils fda zoo]; }; march = derive2 { name="march"; version="3.3.2"; sha256="1qdjajb5mkq2r7p224kbxhf01s75hry5c5hx1cnsb48dfzd2s5xg"; depends=[]; }; marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; @@ -11301,70 +11765,75 @@ in with self; { marginalizedRisk = derive2 { name="marginalizedRisk"; version="2021.2-4"; sha256="0kagl9xghq9nsh9qvx165j1a5plh08zxhb6nm8j402mnl8pq7a4z"; depends=[]; }; margins = derive2 { name="margins"; version="0.3.26"; sha256="0sx5xjbzz1rjz8bklfna3171s53xsh123x4bh0kmwp006v8rv309"; depends=[data_table MASS prediction]; }; marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; + mark = derive2 { name="mark"; version="0.3.0"; sha256="0zv1bm97r1w1b8sylvdgnkvylpl1bs4q53lyv4d8zd08lilw1q97"; depends=[magrittr]; }; markdown = derive2 { name="markdown"; version="1.1"; sha256="06zwbrp14bri3470anadd7dvgmw06xf8df6v2pk64wx3f9sd934d"; depends=[mime xfun]; }; markdownInput = derive2 { name="markdownInput"; version="0.1.2"; sha256="1qxil2liikbbn6w8niyc03fwqvwvdv6wiy98ip8j77729i7g2hln"; depends=[markdown shiny shinyAce]; }; marked = derive2 { name="marked"; version="1.2.6"; sha256="0k367sjyac1w894rndz5m0drmbd56nzyx5mr7mvhsqzq3gnv4dw5"; depends=[bookdown coda data_table expm kableExtra knitr lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; markerpen = derive2 { name="markerpen"; version="0.1.1"; sha256="0i9md9vbqkxibjkn37givxzq8mq0232cvv2fyz6g8cj6flxm6vzr"; depends=[Rcpp RcppEigen RSpectra]; }; marketr = derive2 { name="marketr"; version="0.0.2"; sha256="12nhlz40n80i6zg7y5w9zknq9qpk9qwd3wbvvya1ff8gq195147w"; depends=[dplyr magrittr tibble tidyr]; }; - markmyassignment = derive2 { name="markmyassignment"; version="0.8.3"; sha256="1fslp5fzs79gbw9ydbzxldpclrbdj3qrzmm1b61xji3qzif6r4la"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; + markmyassignment = derive2 { name="markmyassignment"; version="0.8.6"; sha256="1w96jmb6iiw4ghmc73l721fdrq5k197fv21fz7spiapaa5xzbkrb"; depends=[checkmate codetools httr rlang testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.8"; sha256="05hfykjzx4wf2p1d6dvyx5lizfxmq3zprvnfg74r7l1izp7wpl38"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; - markovchain = derive2 { name="markovchain"; version="0.8.5-4"; sha256="1i5k2npvk5z5a7jk7mpvs4p8hbwsj4zyxp8rbpvsf94sgqji7cpy"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; + markovchain = derive2 { name="markovchain"; version="0.8.6"; sha256="1al3b76qi6var3gpfqxy6kp0varyp7sbblrhm6hvzf8nwqvl3hq2"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; marmap = derive2 { name="marmap"; version="1.0.5"; sha256="0aqir3daf154n6qqmy48snsgiz9ixdkrfck67x4pmasxj9w5wgl9"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; marqLevAlg = derive2 { name="marqLevAlg"; version="2.0.5"; sha256="0cp3p9cgnb9hw08s8gjs7yj51d4fsa5zkkrikbgzkw0skj1gaa51"; depends=[doParallel foreach]; }; - mase = derive2 { name="mase"; version="0.1.2"; sha256="1023xvv6yngbc183hb13057spjildywqd0jw2w9jway3zv4dbw9v"; depends=[boot dplyr foreach glmnet magrittr Matrix Rdpack rpms survey]; }; - mashr = derive2 { name="mashr"; version="0.2.38"; sha256="1w1ipkwixq8mr25v7w8vdyi6rwbkgsd0a69w05l0r6bms7dviki8"; depends=[abind ashr assertthat mvtnorm plyr Rcpp RcppArmadillo RcppGSL rmeta]; }; + mase = derive2 { name="mase"; version="0.1.3"; sha256="10wyrvh3p344inx5qbzkwh4rr3lmpnh1ikhrghmlqr5607kiy3fm"; depends=[boot dplyr glmnet magrittr Rdpack rpms survey]; }; + mashr = derive2 { name="mashr"; version="0.2.50"; sha256="0dj5h7fksy36ksancrvadxfn3915m22aza9qyksf7dmqj1mghd9g"; depends=[abind ashr assertthat mvtnorm plyr Rcpp RcppArmadillo RcppGSL rmeta softImpute]; }; mason = derive2 { name="mason"; version="0.3.0"; sha256="1x5wiagb1sy5gkp0xkbr1jzhrjg1c2bqdh4hy6igwcnws2cbhxyr"; depends=[broom dplyr magrittr purrr rlang tibble tidyr tidyselect]; }; + masscor = derive2 { name="masscor"; version="0.0.7.1"; sha256="1153gx648csmzc2znf7l84f134qzp238hqj2s60r9najk1pczgf6"; depends=[metRology]; }; mastif = derive2 { name="mastif"; version="1.0.1"; sha256="1jw7dz4qxyj848qm7lwg0klcw028260nizdi5gdwf7wd5a2nis9c"; depends=[corrplot RANN Rcpp RcppArmadillo repmis xtable]; }; matR = derive2 { name="matR"; version="0.9.1"; sha256="1qw2vqmpq7gc3dmr9r000ccjj7xa0h82waxnvryz3l17ggryyjjm"; depends=[BIOM_utils MGRASTer]; }; matahari = derive2 { name="matahari"; version="0.1.3"; sha256="03mhn4qh1vcz2hr0mxp6gijwgrzvbpfb8dq7lqhchbk5gq5g3fnh"; depends=[clipr jsonlite purrr readr rlang rstudioapi tibble]; }; - match2C = derive2 { name="match2C"; version="1.1.0"; sha256="1i5g035lk4yb6dnf0d3zm85ld2cq3wsjjp893lzc0qs1yn36dw1q"; depends=[ggplot2 mvnfast rcbalance Rcpp]; }; + match2C = derive2 { name="match2C"; version="1.1.1"; sha256="05akm5xw14fngf52zw2r5jri8m0d2hrzaq944jyv285pfi5sd46v"; depends=[ggplot2 mvnfast rcbalance Rcpp]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.7"; sha256="0k5psmjzcyr7pm603vni7w2hvslck05r81cngm26pql2prdrv5yk"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; matchingMarkets = derive2 { name="matchingMarkets"; version="1.0-2"; sha256="1jj5hzxiivqinkpddmkqdxgi83jm6blann9wgv4g8prn3lvp0i85"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; - matchingR = derive2 { name="matchingR"; version="1.3.2"; sha256="03imvgasiahcnzmc8kr2ywwv93fhg50qrqmvm6ifiz0g9d3xh8rr"; depends=[Rcpp RcppArmadillo]; }; + matchingR = derive2 { name="matchingR"; version="1.3.3"; sha256="1wr1faaixn5scx2c8g2jfvfm489k0ah9isza67gz0db8knja9nig"; depends=[Rcpp RcppArmadillo]; }; matchmaker = derive2 { name="matchmaker"; version="0.1.1"; sha256="1sa2cah8gjvg0159rv1sfw9p0aljg66xmij31mz2vfk5683r4b00"; depends=[cli forcats rlang]; }; - matconv = derive2 { name="matconv"; version="0.4.0"; sha256="0kl0647m45mrk13fyr0mkx1x9v3im66ciky8k8nmy4ahkffyasi4"; depends=[]; }; - materialmodifier = derive2 { name="materialmodifier"; version="1.0.0"; sha256="0n736dmnpz0s14c90wm8f1ddf20zkf9nn13d34b6y9vrs8pm6c4z"; depends=[downloader imager jpeg magrittr moments png readbitmap stringr]; }; + matchr = derive2 { name="matchr"; version="0.1.0"; sha256="01nvas5ngkhzhr98n1786zsih2n2lbxx3ajwaqfd96ai0yqw2jnh"; depends=[rlang]; }; + matconv = derive2 { name="matconv"; version="0.4.2"; sha256="1iyy344p3fsfx3gw9kzr0x9zhsplba22fpzl1mhk10wvf99xiwb3"; depends=[]; }; + materialmodifier = derive2 { name="materialmodifier"; version="1.1.0"; sha256="116d8pppibi4kfd4jx4pc80n036lj86fprjnakkv4m890nkbznjr"; depends=[downloader imager jpeg magrittr moments png readbitmap stringr]; }; mathjaxr = derive2 { name="mathjaxr"; version="1.4-0"; sha256="0rywdm4ki569hzmpwnzhr3h6slkkakf4l19rb2fa74ym6s13fmxs"; depends=[]; }; mathpix = derive2 { name="mathpix"; version="0.4.0"; sha256="0wwagf8v7awgiyi8vrfay5m2pbl1czn62g5bkg037wwy0c68n8va"; depends=[base64enc httr magick purrr rstudioapi texPreview]; }; matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; matlabr = derive2 { name="matlabr"; version="1.5.2"; sha256="1ba6cajnzldb1gmn7rf0b198h6mdh58r3frm0z0cmvbinspwz3x7"; depends=[stringr]; }; - matlib = derive2 { name="matlib"; version="0.9.4"; sha256="1myc00mggfxm0p2h2blyn3qa399dldbbq4x6hv7a486gmf03lnrn"; depends=[car MASS rgl xtable]; }; + matlib = derive2 { name="matlib"; version="0.9.5"; sha256="0m03zygd43r0z7cldiwsc91p1xyni6pdvwm8pz4jcg5bmqasfg0w"; depends=[car MASS rgl xtable]; }; matman = derive2 { name="matman"; version="1.1.2"; sha256="08qafqz566d03zaxlxi32ir73rl0kxag257vi15kmw61sd57rrgm"; depends=[data_table dplyr DT forecast ISOweek plotly shiny shinydashboard shinyWidgets tidyr tidyverse]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; matricks = derive2 { name="matricks"; version="0.8.2"; sha256="0ik61jxd4hpw149dbbmis3wsfsim60mw9d0qjwh047qfg6sm1vsc"; depends=[ggplot2 Rcpp reshape2 rlang]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; matrixNormal = derive2 { name="matrixNormal"; version="0.0.5"; sha256="0yb2xnx72czfqzqpxnshlj8jjp6bi1l581wcw9mggisi3f79yp8h"; depends=[mvtnorm]; }; matrixProfile = derive2 { name="matrixProfile"; version="0.5.0"; sha256="0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g"; depends=[fftw signal TTR zoo]; }; - matrixStats = derive2 { name="matrixStats"; version="0.58.0"; sha256="0jab3xk56vqqzgz8jbsvxvsvr83sj0gb3cic0906wjyjijwv8rw3"; depends=[]; }; + matrixStats = derive2 { name="matrixStats"; version="0.61.0"; sha256="16pxsba5i51ifbbgvxln2w6nigbwd3290b2ckgzn5bmib7nc1lyv"; depends=[]; }; matrixStrucTest = derive2 { name="matrixStrucTest"; version="1.0.0"; sha256="06la9xmpi1viyjml4m1akbna3lwkz5lnq95v1nnf73i9zpfwz03k"; depends=[]; }; matrixTests = derive2 { name="matrixTests"; version="0.1.9"; sha256="128h8krc7n6lrh6njyj650ma5gr549p8cyps6dxij6bm0p3n7r62"; depends=[matrixStats]; }; - matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; - matrixdist = derive2 { name="matrixdist"; version="1.0.2"; sha256="1dz7r34a7gj4pjykqzq9i3l1bxg2risdd30cjp1wp6zd3ail6nby"; depends=[Rcpp]; }; + matrixcalc = derive2 { name="matrixcalc"; version="1.0-5"; sha256="1jkgl1v1q7cqpl1rf49qahdr9y0f33f0ldsbgby8xhfv0vpy21jr"; depends=[]; }; + matrixdist = derive2 { name="matrixdist"; version="1.1.3"; sha256="0yvw6rn7js06qhz2qpj9m5h9hjwa7nswkmkyzi1vpa24inbfpzah"; depends=[Rcpp RcppArmadillo]; }; matrixpls = derive2 { name="matrixpls"; version="1.0.13"; sha256="0m9gqq5waicj3znlsyz50cj6w1x6rkvfwknavhxid8r4p9h891ak"; depends=[assertive lavaan MASS matrixcalc psych]; }; - matrixprofiler = derive2 { name="matrixprofiler"; version="0.1.4"; sha256="0ak03x46f87llqg16k5jjpmk7wcil6cq96wiwc9fc37yrwnqlqml"; depends=[checkmate Rcpp RcppParallel RcppProgress RcppThread]; }; + matrixprofiler = derive2 { name="matrixprofiler"; version="0.1.5"; sha256="0rm99pibl5vyvf3w5x6d12wppjxb68n3qy3vvvpnawb8m2h3dkd1"; depends=[checkmate Rcpp RcppParallel RcppProgress RcppThread]; }; matrixsampling = derive2 { name="matrixsampling"; version="2.0.0"; sha256="05dbn7rj07jx1hj7i6k3akf11hysxg6v32kav9fvsqmiy2zkippa"; depends=[keep]; }; - matsbyname = derive2 { name="matsbyname"; version="0.4.16"; sha256="13gl1jkpw3dpv93fvgg84sv4kbg4qv5hzz5z35fsxhqj5m5qrgl3"; depends=[assertthat dplyr Hmisc magrittr purrr rlang stringi tibble]; }; - matsindf = derive2 { name="matsindf"; version="0.3.6"; sha256="1h0hlr2vvqj1jfkn6i7x137xlxsawnnhkg88kl7fga4wfznzyms3"; depends=[dplyr magrittr matsbyname purrr rlang tibble tidyr]; }; + matsbyname = derive2 { name="matsbyname"; version="0.4.23"; sha256="018ngcgx4c55gxs0a372mixp0np2k0alg604wjl7qhfviwzhyrzy"; depends=[assertthat dplyr Hmisc magrittr purrr rlang stringi tibble]; }; + matsindf = derive2 { name="matsindf"; version="0.3.8"; sha256="08cycm8pc0y4qf8wp5dvmsnz1zmsadxipkgmk46cxnhid1l5mma7"; depends=[dplyr magrittr matsbyname purrr rlang tibble tidyr]; }; matuR = derive2 { name="matuR"; version="0.0.1.0"; sha256="01nxs4czzs1kcxk63nwr2gnvffmlnx3yfllrhi8khdkj498s6sx1"; depends=[dplyr ggplot2 ggrepel lubridate magrittr tidyr]; }; mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; - mauricer = derive2 { name="mauricer"; version="2.3"; sha256="0cbrxvlpw89rrdnnsxbl1jmmkn4gccp2xaipnarhk5qd9wp6zm6c"; depends=[beastier curl stringr]; }; - maxLik = derive2 { name="maxLik"; version="1.4-8"; sha256="0dkxkj2mfmqwbwnjsw9j7s8nzhazwrlfzzfz5zyfypanahasdvpy"; depends=[miscTools sandwich]; }; + mauricer = derive2 { name="mauricer"; version="2.5.1"; sha256="1qrfvnvk0vlsbqpjss1409xhlb7j7hadsqi9jydkdayf7mwz9f7a"; depends=[beastier stringr]; }; + maxLik = derive2 { name="maxLik"; version="1.5-2"; sha256="0pdigfpyiqacj2ydhpn5w1h89dz1ydk0syzs25lsgdi40sz0bvkw"; depends=[generics miscTools sandwich]; }; maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; maxadjAUC = derive2 { name="maxadjAUC"; version="0.1.0"; sha256="04zdaqmavhhrj63s2k5pqncvlzbfnxan7r0fagfka9dypwwcl5qm"; depends=[aucm Hmisc Rsolnp survival]; }; maxcombo = derive2 { name="maxcombo"; version="1.0"; sha256="1hwv38a07ry5fv53r2vizifj83xf98znix8nx4zshqyk38vblgp5"; depends=[dplyr magrittr MCMCpack mstate mvtnorm purrr rlang survival]; }; maximin = derive2 { name="maximin"; version="1.0-4"; sha256="0pkf84313x5r7qmhfbd70rjmxffrfk6kzirw1wzrqqygbmcw8k4s"; depends=[plgp]; }; maxlike = derive2 { name="maxlike"; version="0.1-8"; sha256="0lbj212dbx8lbkw808xlhniw5864bh86xs8zwvxcnngj0abapalh"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; - maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; + maxnet = derive2 { name="maxnet"; version="0.1.4"; sha256="05l24dksdgb43dpi4py4qkh8j9ynrnsglydy3gph1b61ygnfa8gx"; depends=[glmnet]; }; maxnodf = derive2 { name="maxnodf"; version="1.0.0"; sha256="1czhy3177bb4a5rxi2s4j3c9xn9f0b2pbkdka1dzw6ga389wdwb3"; depends=[Rcpp]; }; maxstat = derive2 { name="maxstat"; version="0.7-25"; sha256="114z1rwxwvk05ijjhdppzm148n1h192fp0w12ky10zkrhf6kphbg"; depends=[exactRankTests mvtnorm]; }; mazeGen = derive2 { name="mazeGen"; version="0.1.3"; sha256="192xygg3l4rpqp49sgd5hpp4h3f8wjhyldn0l8abxhsks7jd2kfb"; depends=[igraph]; }; mazealls = derive2 { name="mazealls"; version="0.2.0"; sha256="14j6syw1zkgs4cnmxzqpm6klmgvck2gg97wkzmy9al6n0biy8gmb"; depends=[TurtleGraphics]; }; mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; }; - mbbefd = derive2 { name="mbbefd"; version="0.8.9.1"; sha256="0902dhfjrnkd9wmy2nglrycnjmn4sh0qbsmh91cd3g1wh673rpak"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; + mazing = derive2 { name="mazing"; version="1.0.2"; sha256="0kbarbb2qjn278pz50bs3mqryzjzmjjgkyla51fny210zw5862q5"; depends=[]; }; + mbRes = derive2 { name="mbRes"; version="0.1.1"; sha256="1cxvgb1lmhf11fydjhxkbg5gjnhldv4n05dpwsd27x1bbc8fbw8n"; depends=[cowplot data_table dplyr forcats ggplot2 magrittr purrr rlang]; }; + mbbefd = derive2 { name="mbbefd"; version="0.8.10"; sha256="0963lwwb629dwgv1jk4y3438rfj0lm9g6q930xbgxdsc34hn3ppb"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; mbend = derive2 { name="mbend"; version="1.3.1"; sha256="0g7hqjdhaj99rd2jqfb6x7k7gsfcvhdibai3093qcvhv6grb3v7m"; depends=[]; }; mbest = derive2 { name="mbest"; version="0.6"; sha256="1x0f7y5hj6a35wq1xn6g7jyjn9c4zryahwlf07qrypgrcnj2m8vx"; depends=[abind bigmemory foreach lme4 logging nlme]; }; @@ -11374,17 +11843,18 @@ in with self; { mboost = derive2 { name="mboost"; version="2.9-5"; sha256="0yg07fdd1sbjfhhxn1dqgph2vzqyq7l52cdk5iq2a2zy1vh176yg"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; mboxr = derive2 { name="mboxr"; version="0.2.0"; sha256="1d11fpz17k65dzw9sjc7zfs1jpajzrh2pvr2s435p83g3mpf40vz"; depends=[dplyr lubridate magrittr purrr reticulate stringr tibble tidyr]; }; mbr = derive2 { name="mbr"; version="0.0.1"; sha256="08534d0ssj5zli7880a2wzl46ydf87gn5xlv6xp0iph71wlpc52y"; depends=[data_table dplR MASS Matrix Rfast]; }; + mbrdr = derive2 { name="mbrdr"; version="1.0.8"; sha256="03snwvj71q4gfrl6f96bdldh39s2cj9aa07avr7y8vnp8yhm7wg0"; depends=[]; }; mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; - mbsts = derive2 { name="mbsts"; version="1.0"; sha256="0wkglh1g0kdlgw4afqxvwb26difnqhf6g5jsbf8y39mpipxla365"; depends=[KFAS MASS Matrix MCMCpack pscl]; }; + mbsts = derive2 { name="mbsts"; version="2.2"; sha256="07sizvj627vhkpkg044593gh8lsmhw7ahqavmrindzjlfwwlfidb"; depends=[BBmisc ggplot2 KFAS MASS Matrix matrixStats MCMCpack pscl reshape2]; }; mc_heterogeneity = derive2 { name="mc.heterogeneity"; version="0.1.2"; sha256="1nsqbc4cqyg6g3s6ish3fbhqygy1kay68smbv0rhivp0x0dv7can"; depends=[boot_heterogeneity metafor]; }; - mc2d = derive2 { name="mc2d"; version="0.1-19"; sha256="0h4hl4gcig1yaviwxy3rx0x7a1ys98vcdgi153rx01pwp8f6jlfi"; depends=[mvtnorm]; }; + mc2d = derive2 { name="mc2d"; version="0.1-21"; sha256="1vp7xai7pk260053g2g23wzwn6l1pai0n4vjwjg1j8qd6d95j8mi"; depends=[mvtnorm]; }; mcBFtest = derive2 { name="mcBFtest"; version="0.1.0"; sha256="1fmn9pzbvk508ljspksppqxdvggx5bvipgs54nz9605y6p8zzmi5"; depends=[MASS]; }; mcGlobaloptim = derive2 { name="mcGlobaloptim"; version="0.1"; sha256="1p8841y9a4yq51prv6iirgw9ln8jznx8nk547sc5xlznksjy1g9n"; depends=[randtoolbox snow]; }; mcMST = derive2 { name="mcMST"; version="1.0.1"; sha256="18ka76g9pgpycaw0hl8vxpabd8584q1l5d3xmrzy1zwincsg7vgs"; depends=[BBmisc checkmate ecr ggplot2 gtools lhs parallelMap reshape2 vegan]; }; mcStats = derive2 { name="mcStats"; version="0.1.2"; sha256="1r8dxdfcvznl2968xr6fbany1rh7wq5z1p7fhdf5g4b5l28j8pf9"; depends=[dplyr ggplot2 ggthemes gridExtra magrittr rlang tidyr]; }; mcb = derive2 { name="mcb"; version="0.1.15"; sha256="0k986m2vyvfqxw3jmlyvf6r5bq68y92fymy03lffq5lmiqhypixj"; depends=[ggplot2 glmnet lars leaps MASS ncvreg reshape2 smoothmest]; }; - mcbette = derive2 { name="mcbette"; version="1.13"; sha256="1f5kfbyla4qmx3zin6dgcq6fhzd8rwaqg5jfv39bdp6g3srf2805"; depends=[babette beastier beautier curl devtools mauricer Rmpfr testit txtplot]; }; mcbiopi = derive2 { name="mcbiopi"; version="1.1.6"; sha256="1caw2sy15hw2zw0bdynwnsa7hn4rly34hlxp06nwm5lssz8l2597"; depends=[]; }; + mcboost = derive2 { name="mcboost"; version="0.3.3.0"; sha256="07yslqdf0ra4s3lxfxnizf9p7dn045mbcpczp1czhxrwxl6qws03"; depends=[backports checkmate data_table glmnet mlr3 mlr3misc mlr3pipelines R6 rpart]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; mcca = derive2 { name="mcca"; version="0.7.0"; sha256="01nm0plgkik241qhd06v1vs84lf7agc0vkxa27cpr5qlfl4cm4zb"; depends=[caret e1071 MASS nnet pROC rgl rpart]; }; mccf1 = derive2 { name="mccf1"; version="1.1"; sha256="023pvjfc1iv7hac3gz5rakg6ljs92j0qfm4givad5iiwv5n4k3zr"; depends=[ggplot2 ROCR]; }; @@ -11395,43 +11865,44 @@ in with self; { mcen = derive2 { name="mcen"; version="1.2"; sha256="1j0fy0ccbx85znvsxpd72pcgk3qg6r1ngpjjgr04mg9bwlfzpxm2"; depends=[faraway flexclust glmnet Matrix]; }; mcga = derive2 { name="mcga"; version="3.0.3"; sha256="109m01mab5awjf8zjzwl9j7hzac15dyq3x6zba9hsy5i02k5d5w4"; depends=[GA Rcpp]; }; mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; }; + mcglm = derive2 { name="mcglm"; version="0.7.0"; sha256="0xk641g4ymbvh8dhg83d66ybcib52fyxdfigvmc8xghd8x9w2prh"; depends=[assertthat Matrix Rcpp RcppArmadillo]; }; mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; mclcar = derive2 { name="mclcar"; version="0.1-9"; sha256="0bwnivmajsrvmwskhk44qhz4nnc0irxq83g0kzbj4wshhivnwryp"; depends=[fields maxLik nleqslv rsm spam spdep]; }; mcll = derive2 { name="mcll"; version="1.2"; sha256="0i9zqbh0l9a9mv4558gbdq9mh52chanykyfwmiymmxygxhp809sz"; depends=[locfit statmod]; }; mclogit = derive2 { name="mclogit"; version="0.8.7.3"; sha256="1as3mqqzxjdr7saw4vpgg88yqbax86z1qhl9s1jm49cw7nyqigxz"; depends=[Matrix memisc]; }; mclust = derive2 { name="mclust"; version="5.4.7"; sha256="08scl72llpinfijiyx14yqvmx8lma9jvh8h92v9ynnzfr9kadxa5"; depends=[]; }; - mclustcomp = derive2 { name="mclustcomp"; version="0.3.1"; sha256="0jdfdmgd46w7b38nbpd0lj9vqzi2nnf8fv0crj08lfin5ng7jvaa"; depends=[Rcpp RcppArmadillo Rdpack]; }; + mclustcomp = derive2 { name="mclustcomp"; version="0.3.3"; sha256="1kxrms77m7n9lv32771zvwg82xqh5kx8al6f0bknsj8idq8aqbh3"; depends=[Rcpp RcppArmadillo Rdpack]; }; mcmc = derive2 { name="mcmc"; version="0.9-7"; sha256="0q42m8ab7b6bxhns494ksjdss5f3c5m2jjfdlfj6fk1nz7ax7i5p"; depends=[]; }; mcmcOutput = derive2 { name="mcmcOutput"; version="0.1.1"; sha256="0nw33xb7x695g8i91hfj2apgywbyzf2k587drzridqnfmbm26pni"; depends=[coda HDInterval MASS]; }; - mcmcderive = derive2 { name="mcmcderive"; version="0.1.1"; sha256="01fg52067h209h1ds2krk1yldad3bv2bk3217z80cny84zdpyb0f"; depends=[abind chk extras mcmcr nlist purrr universals]; }; + mcmcabn = derive2 { name="mcmcabn"; version="0.4"; sha256="0ym7ngai8pv9xalh1s53p8f96s8xpc05zi6ryih2rjv449ib06kq"; depends=[abn coda cowplot ggplot2 ggpubr gRbase]; }; + mcmcderive = derive2 { name="mcmcderive"; version="0.1.2"; sha256="0v89nyvr2d57zvjy9qq6drqb48s4n88hb65pima1gx4aqb479yfh"; depends=[abind chk extras mcmcr nlist purrr universals]; }; mcmcensemble = derive2 { name="mcmcensemble"; version="3.0.0"; sha256="1yf8mm0nmw0x89pj3is5rv3arcfbxvkfh8bip1sprcqzsrixa0s8"; depends=[future_apply progressr]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.3"; sha256="0187z79gmvcrwqybxh3ckhcrqi0nqhvcvlczgxfkpq95y5czprdq"; depends=[coda colorspace denstrip sfsmisc]; }; - mcmcr = derive2 { name="mcmcr"; version="0.5.0"; sha256="1p67j8vhb3pslny8c31gnp44r39f3qvy50ipl7r8gcn4kqqd0zaq"; depends=[abind chk coda extras generics lifecycle nlist purrr term universals]; }; + mcmcr = derive2 { name="mcmcr"; version="0.6.1"; sha256="0ag8awdibrcylm7gshb60lxyv167k62zldffi7axni3z8w4s9cy5"; depends=[abind chk coda extras generics lifecycle nlist purrr term universals]; }; mcmcsae = derive2 { name="mcmcsae"; version="0.6.0"; sha256="013cyw01rgaywwg7v75wb8imi8jihlhmlc1ip350r5h7ypcksirn"; depends=[GIGrvg loo Matrix matrixStats Rcpp RcppEigen]; }; - mcmcse = derive2 { name="mcmcse"; version="1.4-1"; sha256="05sxz2bjb1y389vrmykcn6hwhgpykzpnh94aq34mbpqdsrb1y63b"; depends=[ellipse Rcpp RcppArmadillo]; }; + mcmcse = derive2 { name="mcmcse"; version="1.5-0"; sha256="0qvlkv7j35h2lxdzhbsbsrf1cgsbgf4in7lxgwmx7vs85k10v0ja"; depends=[ellipse fftwtools Rcpp RcppArmadillo testthat]; }; mco = derive2 { name="mco"; version="1.15.6"; sha256="10h5d2lw6ybyva44nn5wml6v3ljpnv9m1b2lh36vg2cwrdwy5sqp"; depends=[]; }; mcompanion = derive2 { name="mcompanion"; version="0.5-3"; sha256="0051agyzbhrsxi9wpfpqcq98h7y25627s2czf30qxcq80m7xbhj0"; depends=[gbutils MASS Matrix Rdpack]; }; - mcp = derive2 { name="mcp"; version="0.3.0"; sha256="1dgdhspbqc6w7rcplryjy9jjzdpm480rwngn6ri7kjl8bk70hll2"; depends=[bayesplot coda dplyr future future_apply ggplot2 loo magrittr patchwork rjags rlang stringr tibble tidybayes tidyr tidyselect]; }; mcparallelDo = derive2 { name="mcparallelDo"; version="1.1.0"; sha256="1ivh0d4f7ks6xwcjywk62h1zhr7h5bbhzpisky7973wi4g8vipbn"; depends=[checkmate R_utils R6]; }; mcprofile = derive2 { name="mcprofile"; version="1.0-1"; sha256="118n3pxzjm4j9y09d1n2hw7pm0b8b0m8mnm5v9kq76vignklh75l"; depends=[ggplot2 mvtnorm quadprog]; }; mcr = derive2 { name="mcr"; version="1.2.2"; sha256="0n1wd8z7j9s20ym8m6vbpixibmfb3qkykb3z92jv3pbamjf2sxsc"; depends=[]; }; - mcreplicate = derive2 { name="mcreplicate"; version="0.1.1"; sha256="1wmrxm2ddfaj9jnzcndkcc2yh7s3r78cc717d8almld71hrnjbgc"; depends=[]; }; + mcreplicate = derive2 { name="mcreplicate"; version="0.1.2"; sha256="12pmfp75sc00cdrkx4xniq74qqx3y67qxwdrrbp2mf562pdn2gmn"; depends=[]; }; mcsm = derive2 { name="mcsm"; version="1.0"; sha256="13sx7s3ywis5n4a70ld2szld9fb8jkfsc82dy6iskhy17vy8pml0"; depends=[coda MASS]; }; mctest = derive2 { name="mctest"; version="1.3.1"; sha256="1d248r9ifwl1xhvka6z69l943rvbq7s7ag6vqp9lljkcybvg75f2"; depends=[]; }; mcunit = derive2 { name="mcunit"; version="0.3.2"; sha256="16nnm50g87iaf058b1w5w5hphx99xplczndcbv1356f2gs2gfy6l"; depends=[Rdpack rlang simctest testthat]; }; - mcvis = derive2 { name="mcvis"; version="1.0.6"; sha256="14vx9nrdsggkwp3c1jamhxx20h3byamhb8bamf04fvycvwsgibf3"; depends=[assertthat dplyr ggplot2 igraph magrittr psych purrr reshape2 rlang shiny]; }; + mcvis = derive2 { name="mcvis"; version="1.0.8"; sha256="0dc7jwdfzyn6x785lbwikpql96b3gh9fhb65fv4sk9ib28b2kpmy"; depends=[assertthat dplyr ggplot2 igraph magrittr psych purrr reshape2 rlang shiny]; }; mcwr = derive2 { name="mcwr"; version="1.0.0"; sha256="1aqmrxjmllq1waw3pzmwhqd07q02n1h1g6c0qi1fvay4xz0rwgik"; depends=[]; }; md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; md_log = derive2 { name="md.log"; version="0.1.1"; sha256="0ix5nz38xzlhrga40hfhlfss938mrfbni2wysvz2qbpm59qxrhg0"; depends=[futile_logger]; }; mda = derive2 { name="mda"; version="0.5-2"; sha256="1hq0zhhz9klmp4zcr1w8hyn7s1h9kfg57d2l2mfm7psx459j0krl"; depends=[class]; }; mdapack = derive2 { name="mdapack"; version="0.0.2"; sha256="1dfcjh8yax06m890ql0kc2rn539z4xbhw7bq9a8cbrm7jnkq03iq"; depends=[covr curl devtools FactoMineR ggplot2 gh git2r httr knitr mice openssl pkgbuild reshape2 rlang rmarkdown roxygen2 spelling testthat VIM]; }; - mdatools = derive2 { name="mdatools"; version="0.11.5"; sha256="0s8kmmz2k1bmrf5rhyrnlk41v97qqh3nr7x256qindc2snskxl8z"; depends=[Matrix]; }; + mdatools = derive2 { name="mdatools"; version="0.12.0"; sha256="11dav3ljfff945lr1ldbn9g7grjnny5dmk0w723lrk63cx6jd5f0"; depends=[Matrix]; }; mdbr = derive2 { name="mdbr"; version="0.1.2"; sha256="1c33v2dqz1jjh730p486bi07h9m9clpcfrbvhbvwb8fslqxg76qd"; depends=[readr]; }; - mde = derive2 { name="mde"; version="0.3.0"; sha256="17r9sbhlh4haicgxjwmmnl6xgjyi1xl9nlqh1lfmj5qc4wd5yaxd"; depends=[dplyr tidyr]; }; + mde = derive2 { name="mde"; version="0.3.1"; sha256="07idj8yp5adw2qx8nvq0zyg83db6mgp2ndb33grkkzy75vyhgs50"; depends=[dplyr tidyr]; }; mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; - mdendro = derive2 { name="mdendro"; version="1.0.1"; sha256="0pk7b7zn9afc947parkj1qa4d85gq16lalg07fjfripxjnmvjahw"; depends=[rJava]; }; + mdendro = derive2 { name="mdendro"; version="2.1.0"; sha256="1hpm7aqfg340nrrn8m962kwaw67myvcrkv9yihdrxh5gmcjdbhxf"; depends=[Rcpp]; }; mdftracks = derive2 { name="mdftracks"; version="0.2.1"; sha256="0j1j3dbl5g8zv59ppyvnxp39vpd24ygxbdhnavjwnw1v1fpippbf"; depends=[]; }; - mdgc = derive2 { name="mdgc"; version="0.1.4"; sha256="1cqimfr61hw4bk3jwd81b2q206p61dqaf19dn0f7bmizgyqixg7g"; depends=[BH psqn Rcpp RcppArmadillo testthat]; }; + mdgc = derive2 { name="mdgc"; version="0.1.5"; sha256="03rvyivh68dc8j5rpa2dpr2gnlbswr9kgckiavq1lpiic6kzzm90"; depends=[BH psqn Rcpp RcppArmadillo testthat]; }; mdhglm = derive2 { name="mdhglm"; version="1.8"; sha256="1myky8d2ilwdliqrzd2i5qvja82iz7w6qbigl7h4znpk8pdgrjb3"; depends=[boot Matrix mvtnorm]; }; mdir_logrank = derive2 { name="mdir.logrank"; version="0.0.4"; sha256="0bhsr005dq9v85sjm2g9xlpksxwzsmsk14g0q5v3hkjvm5wk6xmv"; depends=[MASS]; }; mdmb = derive2 { name="mdmb"; version="1.5-8"; sha256="0m0fgvz2cmwxqpsrb8ir8vrmb9y99ddc24s9g08w68cakig6pd19"; depends=[CDM coda miceadds Rcpp RcppArmadillo sirt]; }; @@ -11444,36 +11915,37 @@ in with self; { mdthemes = derive2 { name="mdthemes"; version="0.1.0"; sha256="1k0fylg8jz0xdfwq85wap6lgrb9zi219vhmry4lysqssx2szkngk"; depends=[cowplot ggplot2 ggtext ggthemes hrbrthemes tvthemes]; }; mdw = derive2 { name="mdw"; version="2020.6-17"; sha256="0jjajgb1w3vx7vqn2z90xq39hvbcrrd2ky8p31g5absqwwm7lwpa"; depends=[kyotil MASS Matrix]; }; meaRtools = derive2 { name="meaRtools"; version="1.0.4"; sha256="1nxyvdq4670696mhg0svxxlvk9hnr8szai8b18pw6754kmw1bjvn"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; - meanShiftR = derive2 { name="meanShiftR"; version="0.53"; sha256="1pla9hr9nbbnc3hcmk0ywfh6129zng5lp3dmjqb3cgdrmwkdrx9i"; depends=[]; }; - meanr = derive2 { name="meanr"; version="0.1-2"; sha256="0w9jgncbnf82x747pxrpbbbvajmksc1dq79cc4hxr2cpvqsqyfsh"; depends=[]; }; + meanShiftR = derive2 { name="meanShiftR"; version="0.56"; sha256="1bn75r5mf3pr1mr8384w175yabw75cynxlz2xh1gl2nar86k4m0x"; depends=[]; }; + meanr = derive2 { name="meanr"; version="0.1-3"; sha256="1b2xj62qz9919qgy62qn7k4cfxaizfb79rzbca5ksyb2fh8qwh5s"; depends=[]; }; meantables = derive2 { name="meantables"; version="0.1.0"; sha256="1007w4vjb472v15ny1h8dxdzxhddk4z5s5n77ayvcbwpc8nlzmk7"; depends=[dplyr rlang tibble]; }; measuRing = derive2 { name="measuRing"; version="0.5"; sha256="0yblqkv5444y75jkb6d0zs728i6vybm294h7b5622pwfjqlfhnh2"; depends=[dplR pastecs png tiff]; }; measurementProtocol = derive2 { name="measurementProtocol"; version="0.1.0"; sha256="0vyfkrlinwq2930xqwp1hb8g7g3q7h7yg6y0c8gkwgscrxswifhg"; depends=[assertthat cli httr jsonlite rappdirs]; }; measurements = derive2 { name="measurements"; version="1.4.0"; sha256="1kihavs9vgxwqjm9z1zjjngkmcwfsv8dg7nn9nrv5r06k5hv8bz6"; depends=[]; }; measures = derive2 { name="measures"; version="0.3"; sha256="0325hhncg9fhq28cfl1hk6rhcmzzcngsmnkmbn9ri3b4hwqlafal"; depends=[]; }; - meboot = derive2 { name="meboot"; version="1.4-8"; sha256="10kii09v1nm7m3sqn1wsszc5m0zn0bkip9zjpvn84xdf3nz9kp8b"; depends=[dynlm nlme tdigest]; }; + meboot = derive2 { name="meboot"; version="1.4-9.1"; sha256="0nsqrcxw8kx2vgl7p2ib6lr3zaigcmb9ymb16hwyf9dw4vb21cdz"; depends=[dynlm hdrcde nlme tdigest]; }; mecor = derive2 { name="mecor"; version="0.9.0"; sha256="0g04rwbgyp316yk7qympk312b6k133cvwb65asflhfjb80kil4kx"; depends=[lme4 lmerTest numDeriv]; }; - medExtractR = derive2 { name="medExtractR"; version="0.2"; sha256="17fc54w1jizqji27xsyiq6v31q8r86sps1nl6mgqsi5h7mzni98g"; depends=[stringr]; }; + medExtractR = derive2 { name="medExtractR"; version="0.3"; sha256="13ai3m8dqbl62f6smy8xlslyrhlkkgcy2xkhswi230sj60b58anh"; depends=[stringi stringr]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; - medfate = derive2 { name="medfate"; version="1.1.0"; sha256="1cq83phvbirw7q8ik9jiv7y1jk59yjjs2r09qcj7jqsy7gb5qa6j"; depends=[ggplot2 httr jsonlite meteoland Rcpp sp spdep]; }; + medfate = derive2 { name="medfate"; version="2.2.3"; sha256="0r10ajajp39fcg277aammr3qspdcvdckp2gz6mllvk1pczyhyynw"; depends=[ggplot2 meteoland Rcpp]; }; medflex = derive2 { name="medflex"; version="0.6-7"; sha256="171vp0wmmmbz42xcwjy065vhvig49s4ac2hzawfww2mvpfj0g0fj"; depends=[boot car Matrix multcomp sandwich]; }; mediacloudr = derive2 { name="mediacloudr"; version="0.1.0"; sha256="1r11mpz44msla71lqw45r9s8z7rwvbnqi026l0ljx6crby183h0w"; depends=[httr jsonlite rvest xml2]; }; mediateP = derive2 { name="mediateP"; version="0.1.0"; sha256="0xz07kvpyczhjgvli1f6d9k5khj9zwnwy51gakj3zm85nq64kxyn"; depends=[boot]; }; mediation = derive2 { name="mediation"; version="4.5.0"; sha256="0i88wvqqw8cmxmh9i78rqzp4s16zhf12dgl9fsk9bhw7hxhhc0i1"; depends=[boot Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; mediationsens = derive2 { name="mediationsens"; version="0.0.2"; sha256="1wvd9kcz4sh0ylydp8q49013i408bn9w5m5ihg0s5r0489359385"; depends=[distr mediation]; }; + medicaldata = derive2 { name="medicaldata"; version="0.2.0"; sha256="0dljqg24mkn7bjbbz5dp0z8yb5sl3i4a89rl32grlvwf0z3b1njn"; depends=[]; }; medicalrisk = derive2 { name="medicalrisk"; version="1.3"; sha256="12p3mjy6lphjajxz7is04cahp0598ip9ixfkdimvw1k8n5hs9mj0"; depends=[hash plyr reshape2]; }; medicare = derive2 { name="medicare"; version="0.2.1"; sha256="00a1gml2khzisdavnaip6ap4bw45b17nbl9cqb1mqrm4y0p9gm16"; depends=[]; }; meditate = derive2 { name="meditate"; version="0.1.3"; sha256="02mgnbxlvi73zpnghlcx89jvri8144cf0bzq0hrbhh2nq2c1sdjg"; depends=[audio checkmate deldir wesanderson]; }; meditations = derive2 { name="meditations"; version="1.0.1"; sha256="0wnx3zadpngfch0sb0ifqvsmzl613639f1yazwsgvhk29mycx4ss"; depends=[]; }; medmod = derive2 { name="medmod"; version="1.0.0"; sha256="1f7bzdcjnbz9izlfblxcaa85qxx8kzn62qgjd3qlb7jl7mdy5q54"; depends=[ggplot2 jmvcore lavaan R6]; }; medrxivr = derive2 { name="medrxivr"; version="0.0.5"; sha256="19gakl39n2jch84sv35jkk4g2c0k4h3ch3l3hz1w5p94mn2jlgqr"; depends=[bib2df curl data_table dplyr httr jsonlite lubridate progress purrr rlang stringr tibble vroom]; }; - meedr = derive2 { name="meedr"; version="0.0.1"; sha256="0dskd2j68ddccpyx9044nv2ls1x1pj8dsn2hgxj5niw1wffsfkgq"; depends=[dplyr furrr future httr jsonlite lubridate memoise purrr]; }; - meerva = derive2 { name="meerva"; version="0.1-2"; sha256="1f7p504hyfsdf3w13l4l8m3xs4kd2yj7d0k0cnipv1hkpvph76c2"; depends=[dplyr ggplot2 survival tidyr]; }; + meerva = derive2 { name="meerva"; version="0.2-1"; sha256="07w52i1kpbcaykg2qywlzx86s5b4441v9qqblj1n6005zrjb9mlg"; depends=[dplyr ggplot2 matrixcalc mvtnorm survival tidyr]; }; meetupapi = derive2 { name="meetupapi"; version="0.1.0"; sha256="1iaxpfzgn478np9cjwz0zalfy1p7jwabnwpfv31svw052i8bs9yl"; depends=[dplyr httr magrittr purrr]; }; mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; mefa4 = derive2 { name="mefa4"; version="0.3-7"; sha256="0iq3n77gbl3zbplaqp1nwb72y9w797m938albx27727pkzyanxf1"; depends=[Matrix]; }; meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; }; mekko = derive2 { name="mekko"; version="0.1.0"; sha256="09y50k4r4mnx351a5zhkqg9s2xyl3d149dhmfy2z6hzm5yg2ajyi"; depends=[ggplot2]; }; + meltr = derive2 { name="meltr"; version="1.0.0"; sha256="0pcpgwk7if9f441z0vwh9g0ydhzkv3h4db433snkk5g4rfikx3ad"; depends=[cli cpp11 R6 rlang tibble]; }; meltt = derive2 { name="meltt"; version="0.4.1"; sha256="1113rdw0jglwkcd3g31llhgzqmwpxfz2bp60m3x2zdbdrvwc1z9n"; depends=[dplyr ggplot2 leaflet plyr Rcpp RcppArmadillo reticulate shiny shinyjs tibble tidyr]; }; mem = derive2 { name="mem"; version="2.16"; sha256="16xm9hai1aqhrbpxln6az4qbwz3kk2izmq39nzpzjc3ardpq1ljr"; depends=[boot dplyr EnvStats ggplot2 mclust purrr RColorBrewer RcppRoll sm tidyr]; }; memapp = derive2 { name="memapp"; version="2.14"; sha256="0w2lbypz0bc50s6yrvidz96wpz53cxpk5a9yhbq7rp8chr9r8cm3"; depends=[dplyr DT foreign formattable ggplot2 haven mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes shinyWidgets stringi stringr tidyr]; }; @@ -11485,6 +11957,7 @@ in with self; { memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memochange = derive2 { name="memochange"; version="1.1.1"; sha256="144134kpchb7ps8b2g7pyga5add0iqphzcwygf11aybmbzmp90x7"; depends=[forecast fracdiff longmemo LongMemoryTS sandwich strucchange urca]; }; memofunc = derive2 { name="memofunc"; version="1.0.2"; sha256="02y32mnwafqnsvs3vy4g8v0jmdvnx935dqavy3q1f2n8c76p0bk9"; depends=[digest magrittr uuid]; }; + memoiR = derive2 { name="memoiR"; version="1.1-2"; sha256="0py8kkj0jka6a211r7yhdmwnhf7nz13zkbgai2df4bc3gxxw9hzs"; depends=[bookdown rmarkdown usethis]; }; memoise = derive2 { name="memoise"; version="2.0.0"; sha256="1bzcv7pmls3bx2w5ccv1pm20wycbfqba1v76k0fjgmjsm6hy76pz"; depends=[cachem rlang]; }; memor = derive2 { name="memor"; version="0.2.3"; sha256="1b3rjh121in7gi6khbhh2d1r0998a24ifcg6hpv8cdksl6lhm330"; depends=[knitr rmarkdown yaml]; }; memoria = derive2 { name="memoria"; version="1.0.0"; sha256="05nx6xkgf1mkn1ajjizwp66xhn7ddbvgdnmkdbcl4s7sq456vczw"; depends=[cowplot ggplot2 HH ranger stringr tidyr viridis viridisLite zoo]; }; @@ -11495,12 +11968,14 @@ in with self; { mergedblocks = derive2 { name="mergedblocks"; version="1.1.0"; sha256="0hgfyb99hdph4rx32072v40j3z56bwl8lvpxqmms783b997alaml"; depends=[randomizeR]; }; merlin = derive2 { name="merlin"; version="0.1.0"; sha256="11in84pxgz76l2cfpd7m03fai1gwdhp2rzrn3pbwrpywgq210pmj"; depends=[MASS randtoolbox statmod survival]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; + meshed = derive2 { name="meshed"; version="0.1.2"; sha256="14m440j6firib112p06hvwgkn4jk0sjpxdzq59a8xy9y009hj05v"; depends=[dplyr glue magrittr Rcpp RcppArmadillo rlang]; }; messaging = derive2 { name="messaging"; version="0.1.0"; sha256="0q19cqp1zgh0yhk1ql0jqf414bhx6jwhkairq6wx2cmkli2g7k1y"; depends=[dplyr glue magrittr rlang stringr]; }; + messydates = derive2 { name="messydates"; version="0.1.1"; sha256="1xqavldvq9qxhk5y7dlcra3vlqdvjxmhk4ydyrk25diqhaix4qqv"; depends=[covr dplyr lubridate purrr stringr tibble]; }; met = derive2 { name="met"; version="0.1.0"; sha256="0714103xzc4n178307czxmcv7ygjiigjr9b6xnj240ljp7qmln19"; depends=[DiPs]; }; - metR = derive2 { name="metR"; version="0.9.1"; sha256="1f8x4rfyd5f4idrzj28wg9mp7bkqpjrc5a2kd97vh8iljn87izaz"; depends=[checkmate data_table digest fields Formula formula_tools ggplot2 gtable isoband lubridate memoise plyr purrr RCurl scales sp stringr]; }; + metR = derive2 { name="metR"; version="0.11.0"; sha256="09ar9lckrzbvcy0jgnwlrnj96ln426yh70dgjfmlac68bhinv2fw"; depends=[checkmate data_table digest fields Formula formula_tools ggplot2 gtable isoband lubridate memoise plyr purrr RCurl scales sp stringr]; }; metRology = derive2 { name="metRology"; version="0.9-28-1"; sha256="1syjwblyd18myxrs0hx4m91fgb6zs3r4g7w701j2f2pw6j9mvz0y"; depends=[MASS numDeriv robustbase]; }; metScanR = derive2 { name="metScanR"; version="1.2.3"; sha256="1v7zrxj3wspx6f5n5s75skcygbf3r85rn4p0z9iwbrbrgxwi4qgs"; depends=[geosphere leaflet matlab plyr RCurl]; }; - meta = derive2 { name="meta"; version="4.18-0"; sha256="1dia3g42fhpwxiy2az6cr4cq7jdzf6rlf69g7cxvrrkvd5bhdnqa"; depends=[CompQuadForm lme4 metafor xml2]; }; + meta = derive2 { name="meta"; version="4.19-1"; sha256="15aww6fny8s74bk72517w0jvh4hjylw7gb3wcmz45wrs5yn3gj1c"; depends=[CompQuadForm lme4 metafor xml2]; }; meta4diag = derive2 { name="meta4diag"; version="2.0.8"; sha256="1ila8x9r1rdmlwfpzfx1zj5yx1m4yrbhyb74db4wqbh1dswn7zsm"; depends=[caTools shiny shinyBS sp]; }; metaBLUE = derive2 { name="metaBLUE"; version="1.0.0"; sha256="0ppn4bvr10z32pghmv4wjv86k6n5y5bkfxc6h5mvb556v6jnl6d8"; depends=[Matrix]; }; metaBMA = derive2 { name="metaBMA"; version="0.6.7"; sha256="1nk76cw3wb8gwknn5xq75400pfbqx72rf499nylc6yr9nascq2rk"; depends=[BH bridgesampling coda LaplacesDemon logspline mvtnorm Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; @@ -11512,45 +11987,46 @@ in with self; { metaRMST = derive2 { name="metaRMST"; version="1.0.0"; sha256="1mq9j7iczjh7d3cps9g1bh0f8k388bdn8d5lkjs2s8y9fq1kxzmx"; depends=[meta mvmeta rstpm2 survival survRM2]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.5"; sha256="1a561iwgb64g536h09z6bn6fms5s9gxs02yp4f2ayy7l1srcsc6y"; depends=[]; }; metaSDTreg = derive2 { name="metaSDTreg"; version="0.2.1"; sha256="0nqnb0isjz2czvih6zr4jglrwfmf9ahm9a3nwkvr2cwbmdh5clq2"; depends=[Matrix maxLik ordinal truncnorm]; }; - metaSEM = derive2 { name="metaSEM"; version="1.2.5"; sha256="05lmangh8fggyfiad2qnrfh1mw3za3xjac5d5dcffimqlbm8hmb3"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; + metaSEM = derive2 { name="metaSEM"; version="1.2.5.1"; sha256="027qwbnn63c09ac560gr99fxv4ccfzd1drdcp2r610y5z9079i7i"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; metaSurvival = derive2 { name="metaSurvival"; version="0.1.0"; sha256="05f103fi287y64gys73a55snw54bnph69q8dykfii10dykd44g0y"; depends=[mvtnorm survival]; }; + metaboData = derive2 { name="metaboData"; version="0.6.2"; sha256="1iiy9ipyp3h1rvcbjld6bdy1jgnxbixvgs5xqwly1yj4mvri0bsg"; depends=[dplyr fs magrittr piggyback purrr readr rlang stringr tibble yaml]; }; metabolic = derive2 { name="metabolic"; version="0.1.0"; sha256="1bk8d0sxlgc17d7x02zmx23fdqz39c9zpin16bzhcj602kjcq0y8"; depends=[cli dplyr forcats ggfittext ggimage ggplot2 glue magrittr meta patchwork purrr rmarkdown scales stringr tibble tidyr usethis]; }; metabolighteR = derive2 { name="metabolighteR"; version="0.1.2"; sha256="1v50b0pp2hzn6b4xrlclaks3kd315rir44acm24mmqhqybj6lhls"; depends=[crayon dplyr httr magrittr purrr]; }; metacart = derive2 { name="metacart"; version="2.0-3"; sha256="1wim72fvhx6cyc16c9gl8cwzbhlpzilk7q8gi4jnzzazqmc1kb5n"; depends=[ggplot2 gridExtra Rcpp rpart]; }; - metacoder = derive2 { name="metacoder"; version="0.3.4"; sha256="0qnsn6zpk9vf5p4jj0pdkldi0p7a1rjccdrk68qswy04dlsq15vg"; depends=[ape biomformat cowplot crayon dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr svglite taxa taxize tibble traits vegan viridisLite zoo]; }; + metacoder = derive2 { name="metacoder"; version="0.3.5"; sha256="0d0ihglsal9cx03jjq472x2xlqdflgxhzkr0vwvjpq0rqvq5syva"; depends=[ape cowplot crayon dplyr GA ggfittext ggplot2 igraph lazyeval magrittr R6 Rcpp RCurl readr rlang seqinr stringr taxize tibble vegan]; }; metacom = derive2 { name="metacom"; version="1.5.3"; sha256="0c0gzn28cl2sl52wx2n36jm9c18d9s3yqjyx88kgbmd9069z1nvk"; depends=[vegan]; }; metacor = derive2 { name="metacor"; version="1.0-2.1"; sha256="0y3z7jbhw5c2dbn9fx9wlw1311irjc2xvnm5hnaixbbj53qz24n0"; depends=[gsl rmeta]; }; + metadat = derive2 { name="metadat"; version="1.0-0"; sha256="172bvdkmjvxx5cylb4wxbrhnmlzrc3ipfq7343ggypqln975lczd"; depends=[mathjaxr]; }; metadynminer = derive2 { name="metadynminer"; version="0.1.6"; sha256="0zg08lwnimnmfwac0d5kg8yhsl88gmn029dra18phy1jzkfnsx34"; depends=[Rcpp]; }; metadynminer3d = derive2 { name="metadynminer3d"; version="0.0.1"; sha256="0riqr2hhk4h0rm7m4njb2dd2f24jff7lzf9chh83sq4q3wldgpz5"; depends=[metadynminer misc3d Rcpp rgl]; }; metafolio = derive2 { name="metafolio"; version="0.1.0"; sha256="18s78lljwnn3j0l3mqc0svszcb3c8yzyzlpnimndbiq9yxagxnnf"; depends=[colorspace MASS plyr Rcpp RcppArmadillo]; }; - metafor = derive2 { name="metafor"; version="2.4-0"; sha256="1b599fxk7s0brkchmx698fr5k4g1kzkia2rnlvhg349ffs5nfjmn"; depends=[Matrix nlme]; }; + metafor = derive2 { name="metafor"; version="3.0-2"; sha256="12hk6k2awbf022bbkh0zqcmm8fi534yzgv83c5rxl9djjx8l7pq2"; depends=[mathjaxr Matrix nlme pbapply]; }; metaforest = derive2 { name="metaforest"; version="0.1.3"; sha256="1q6m60cd7gl7y0gdjd10ky25hwv5jc4x5g5sr5w61xc3j2hnw8in"; depends=[data_table ggplot2 gtable metafor ranger]; }; metafuse = derive2 { name="metafuse"; version="2.0-1"; sha256="1zdw22f5kzvy2xr3c2csy873hcags60as567brc2sw17d0apfy8j"; depends=[evd glmnet MASS Matrix]; }; metagam = derive2 { name="metagam"; version="0.2.0"; sha256="0il5m02v3fv5gl9pf3ggkv0kwaycmvvaxzxda20rg30cbhma27vy"; depends=[dplyr furrr ggplot2 knitr metafor metap purrr rlang stringr tidyr]; }; metagear = derive2 { name="metagear"; version="0.7"; sha256="1gwfk6v591xxsccbi287b90vnf5c1jfz72jxcxy9iswp0jpjflaq"; depends=[MASS Matrix metafor stringr]; }; - metaggR = derive2 { name="metaggR"; version="0.1.0"; sha256="05y35crz2z348vb90izkb29l1rvsfl3bjn0pr9r3b1m2mxmn02j3"; depends=[MASS]; }; + metaggR = derive2 { name="metaggR"; version="0.2.0"; sha256="00w40ip630p42h9v87zq08xrggpwkvbqmn4m0963s7x7yjscwp9d"; depends=[MASS]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="2.0.0"; sha256="0ra4hl9l1jlzymj218m2i6xrxfacyx4aaln5pk7q4di2ks0nq11m"; depends=[]; }; metajam = derive2 { name="metajam"; version="0.2.3"; sha256="0ryzsnwfhapsyz40ckjj6gn2chf37m62z3l7xv703878bghpdqwc"; depends=[dataone dplyr EML emld lubridate purrr readr rlang stringr tibble tidyr]; }; metamedian = derive2 { name="metamedian"; version="0.1.5"; sha256="1v2nha2qc9vs2s9nfvbia033ppprkwxj5fadlrpy20fj2lr8z7z6"; depends=[estmeansd Hmisc metafor]; }; metamer = derive2 { name="metamer"; version="0.2.0"; sha256="0wdhr83mph9v7vb9mfhf7lcwmp0smz72sniass7kxcbj6j9hga4g"; depends=[FNN progress]; }; metamicrobiomeR = derive2 { name="metamicrobiomeR"; version="1.2"; sha256="0fgdjy2s47pqmb9x79a4sf0kn4hbc49rd41jnzw0d3ll1l9kwy7f"; depends=[compositions dplyr gamlss gdata ggplot2 gridExtra lme4 lmerTest matrixStats meta plyr tidyr zCompositions]; }; - metamisc = derive2 { name="metamisc"; version="0.2.3"; sha256="13hcjl0z22dfl12nip0ni5fd9jqgr2569l5300g7mhsnd45k6ijp"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; - metan = derive2 { name="metan"; version="1.13.0"; sha256="1crj6g8128av58qs9nip3ycjwg2ppbbbgcvk9w5cnl1cwnxg919i"; depends=[dplyr GGally ggforce ggplot2 ggrepel lme4 lmerTest magrittr mathjaxr patchwork purrr rlang tibble tidyr tidyselect]; }; + metamisc = derive2 { name="metamisc"; version="0.2.5"; sha256="1fg6k2sr74iprjx2bwqqfnp67c493fkilncy2nbynv4sqmbl8s0i"; depends=[dplyr ggplot2 lme4 metafor mvtnorm plyr pROC]; }; + metan = derive2 { name="metan"; version="1.15.0"; sha256="140ldg9w2z3nc04dwzw6lpnn1an28mb7013bfr72rxhkbh8wravl"; depends=[dplyr GGally ggforce ggplot2 ggrepel lme4 lmerTest magrittr mathjaxr patchwork purrr rlang tibble tidyr tidyselect]; }; metansue = derive2 { name="metansue"; version="2.4"; sha256="1ja7a3z4d764a1rcf256kmzf8xc6d8x7mqq12vzznw5ks8r2p9hk"; depends=[]; }; - metap = derive2 { name="metap"; version="1.4"; sha256="19c51fa5kh4yq3v7jd8cilgv9xr59qv20xprqgmlxbfh4gc27b2z"; depends=[lattice mathjaxr mutoss Rdpack TFisher]; }; - metapack = derive2 { name="metapack"; version="0.1.2"; sha256="1rmnf6mlwwxqlpn29qjjl3vlqssd1qybfw6yhrinzannm1vfw2qj"; depends=[BH ggplot2 gridExtra Rcpp RcppArmadillo RcppProgress]; }; + metap = derive2 { name="metap"; version="1.5"; sha256="0cwjhnzzafaq00nvjk76xnb9m83sv0ga1binm2142j9pkfj762v4"; depends=[lattice mathjaxr mutoss Rdpack TFisher]; }; + metapack = derive2 { name="metapack"; version="0.1.3"; sha256="07z80q7dnirn6zyiycifd20cmwz9jynqf13z3fxk3zki26mriw7r"; depends=[BH Formula ggplot2 gridExtra Rcpp RcppArmadillo RcppProgress]; }; metaplot = derive2 { name="metaplot"; version="0.8.3"; sha256="1zw8bq2fy9m15dfc92ag0dz2k9dqrf5jbvfaycizcgsgaqd79s1c"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; - metaplus = derive2 { name="metaplus"; version="0.7-11"; sha256="05pkgw0zlq3q9mvdw2yxz9mxzqwq3c8q6cwvh87cigw1pf8y9an7"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; + metaplus = derive2 { name="metaplus"; version="1.0-2"; sha256="1fgfw9d93agcb9bbwaxzgrgpnlq146khc62vk8fmlzk3idxjpcp8"; depends=[bbmle boot doParallel doRNG fastGHQuad foreach lme4 MASS metafor numDeriv Rfast]; }; metapost = derive2 { name="metapost"; version="1.0-6"; sha256="098f7sifg814mc4sb1nb4d6dlr1xms5hwyp08ksxg0i4ayf9jf3c"; depends=[gridBezier]; }; metapower = derive2 { name="metapower"; version="0.2.2"; sha256="1r6mmdxxi83isjjyfzblwpzfgqdmfhbqmq49zm2b4jd0zvc0lfcx"; depends=[cowplot dplyr ggplot2 knitr magrittr rlang testthat tidyr]; }; - metapro = derive2 { name="metapro"; version="1.5.8"; sha256="0ymbqzm317fiywzxaizddhvjzwp2wyx9y7zgbg4nrz11l3r2bp2n"; depends=[metap rSymPy]; }; metaprotr = derive2 { name="metaprotr"; version="1.2.2"; sha256="1iz5aqd8ha0h19sa58s7xd4h26lbqp68dxy93pxnx9bj3bv615b3"; depends=[ade4 dendextend dplyr ggforce ggrepel reshape2 stringr tidyverse]; }; metarep = derive2 { name="metarep"; version="1.0.1"; sha256="0jnxx11jxj63ry0bkjlh9g2x2pr2qi24nql99iibz2ckbx8344p3"; depends=[meta]; }; metasens = derive2 { name="metasens"; version="0.6-0"; sha256="05ghc5jajzl540knm0vzvlmp3nl0b0arm09wacxwid800sm2dzga"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-5"; sha256="1h3dcs1m7606b3a41yw2lak3lrqmsbpnx67qv24wvq003apz1sfd"; depends=[]; }; - metathis = derive2 { name="metathis"; version="1.0.3"; sha256="12vn0b5mmf3i5cn44zh901i6dlgd95xa09vray644lz5nmllh7l8"; depends=[htmltools knitr magrittr purrr]; }; - metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; }; + metathis = derive2 { name="metathis"; version="1.1.1"; sha256="0vac4sjlbz1cpdx0yc6q52mj174xay5j81cl5f4z2q9in0jy8f8b"; depends=[htmltools knitr magrittr purrr]; }; + metavcov = derive2 { name="metavcov"; version="2.1"; sha256="0q68jiym1dbas389k0qrgbz6k1rwksnakc4fa3fsy0dwszkbh26k"; depends=[corpcor]; }; metaviz = derive2 { name="metaviz"; version="0.3.1"; sha256="0jvv49rw66v7saj2y1q88rp6fyzq7473af5d3k77ymvjbpqyrbyz"; depends=[dplyr ggplot2 ggpubr gridExtra metafor nullabor RColorBrewer]; }; metawho = derive2 { name="metawho"; version="0.2.0"; sha256="1mflkrlnb1wk9vbbj621cy64s78q677d8fcnsi1ybh49k7sqmw20"; depends=[dplyr forestmodel magrittr metafor purrr rlang]; }; meteR = derive2 { name="meteR"; version="1.2"; sha256="02637d3dnfq0jv9d74y99x7ms89y3jcmkpazc44g44sa7jx4i510"; depends=[distr nleqslv]; }; @@ -11565,40 +12041,43 @@ in with self; { metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; metro = derive2 { name="metro"; version="0.9.1"; sha256="0agmwvbwhpn5nzzkyz20pspbv6i80i636fhf9sqydgl1fskknrf2"; depends=[geodist hms httr jsonlite tibble]; }; metropolis = derive2 { name="metropolis"; version="0.1.8"; sha256="031fcy0v13bvy7gg26988fvpqdsfndx2rynkhb1jvirnrf0fngy4"; depends=[coda]; }; - mets = derive2 { name="mets"; version="1.2.8.1"; sha256="0prhnjqgrvw650f89sy7wj52wsd7h7gc4iqinv17j54ag8xrnhcq"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; + mets = derive2 { name="mets"; version="1.2.9"; sha256="1daah4wkn428gdlah5f96jyjs3z9c3sz8h7g9lil8p3i9q3crb2z"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; metsyn = derive2 { name="metsyn"; version="0.1.2"; sha256="0iwp0nz07yd33qd93fjblmvik1l1xkv6rkccn3054zs2bkrzjq4f"; depends=[foreach readr stringr tibble]; }; mev = derive2 { name="mev"; version="1.13.1"; sha256="1zbr5f8w56c9z0lp4ak47fxnnfrdm74liqcjvij0n4ajqs6glaak"; depends=[alabama boot evd nleqslv nloptr Rcpp RcppArmadillo TruncatedNormal]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; - mexhaz = derive2 { name="mexhaz"; version="1.10"; sha256="0bgnixbl3birn1xdbxdahs9204manr64afwy8wxhz3b2qpa3fhyi"; depends=[lamW MASS numDeriv statmod survival]; }; - mfGARCH = derive2 { name="mfGARCH"; version="0.2.0"; sha256="19v0kqn70h42vsyg4ldi5qivhwh97zk8shvahdzxbcqjjig6lylh"; depends=[maxLik numDeriv Rcpp zoo]; }; + mexhaz = derive2 { name="mexhaz"; version="2.0"; sha256="11agjdrfhqmx2ks0vszg4qi803xrs39fv2cvnmc1b6qhkgcdr2v7"; depends=[lamW MASS numDeriv statmod survival]; }; + mexicolors = derive2 { name="mexicolors"; version="0.2.0"; sha256="0vbhwaq19hqd63qjybssgqxkawjr6vnar6k0nrb583hh1q9hjyg2"; depends=[]; }; + mfGARCH = derive2 { name="mfGARCH"; version="0.2.1"; sha256="1pcabijwhdxhdlrdjvi2zl8la939igsdy3j1yv0ic8wvkpw1sh4x"; depends=[maxLik numDeriv Rcpp zoo]; }; mfaces = derive2 { name="mfaces"; version="0.1-3"; sha256="0pqmsflph2iplr0jlwpgbfgg523v0nw41gvjb88q1d993pyfhfdl"; depends=[face Matrix matrixcalc mgcv]; }; mfbvar = derive2 { name="mfbvar"; version="0.5.6"; sha256="1wv46h6cr0xnvr8dxymx362skf7nf77yw84y6g48rj9mbq8kkkcj"; depends=[dplyr ggplot2 GIGrvg lubridate magrittr Rcpp RcppArmadillo RcppParallel RcppProgress stochvol tibble zoo]; }; - mfdb = derive2 { name="mfdb"; version="6.2-0"; sha256="11xi915plc90awasmny9ynwmz0yw18frfp1q2xv7bqk4v96fcxgp"; depends=[DBI getPass logging RPostgreSQL]; }; + mfdb = derive2 { name="mfdb"; version="7.1-0"; sha256="0xsffbvphv81qm3m71x9pzf0r0x4iz46nyv73dqgjgwjpaa5k23g"; depends=[DBI duckdb getPass logging rlang RPostgres RSQLite]; }; mfe = derive2 { name="mfe"; version="0.1.5"; sha256="1pw9gw9bd778s57dyjwbmrmsla4m8dkf8g49gplv4zrsvlgsgbr3"; depends=[cluster clusterCrit e1071 ECoL infotheo MASS rpart rrcov]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.2-2"; sha256="04pwp67i4sn4rf497pgy6qifwvrcmwyxn8x5sn96fy8qyrdzjfhj"; depends=[betareg lmtest MASS sandwich]; }; mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; mgc = derive2 { name="mgc"; version="2.0.2"; sha256="1l9qs4nz1rn56qp569nh26yz3c7i4zh3r43c209zh7kvizpagx0i"; depends=[abind boot energy MASS raster]; }; - mgcViz = derive2 { name="mgcViz"; version="0.1.6"; sha256="12isaqpbhdg2qhw76wj6hqi233dw3md061bbirkgzr5clrb8kxlk"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; - mgcv = derive2 { name="mgcv"; version="1.8-35"; sha256="1dyphss1bw5rd8apgxsb364rcrkdbc9pcbsa0jy95mg9g5434wvk"; depends=[Matrix nlme]; }; + mgcViz = derive2 { name="mgcViz"; version="0.1.8"; sha256="0phpv4767h9ls1gvkira37abv0sdps8rnpsn2189yrb5d72m49ii"; depends=[gamm4 GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI plyr qgam rgl shiny viridis]; }; + mgcv = derive2 { name="mgcv"; version="1.8-37"; sha256="14gw714xcyvgrbajijmyd4v8zs84i701g7gyld6z8p7677dgc8w8"; depends=[Matrix nlme]; }; mgee2 = derive2 { name="mgee2"; version="0.2"; sha256="1bhjajcjvm8brc92v6ij378i0d3vniip77m4pz7n02sgswj0w61a"; depends=[ggplot2 MASS]; }; mglmn = derive2 { name="mglmn"; version="0.1.0"; sha256="1g642hhs28q6x34xgrfrmmsb2jsn9zy4jxad0x5ai3px48zzdb4r"; depends=[mvabund snowfall]; }; - mgm = derive2 { name="mgm"; version="1.2-11"; sha256="07640ibqinz1l34y863r046dxlzqg7gzw58rgjiqnisxr3azr9r8"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; + mgm = derive2 { name="mgm"; version="1.2-12"; sha256="0p5l1mcgz47rri800i78q7f89s2ll5w5kqmj1lkd4i93fj4bh585"; depends=[glmnet gtools Hmisc qgraph stringr]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; - mgss = derive2 { name="mgss"; version="1.1"; sha256="09c9ydkm47x94206267mkcdww9pp5r0p6qmhcdqclz2264hvr2ix"; depends=[combinat Matrix Rcpp rTensor statmod]; }; - mgsub = derive2 { name="mgsub"; version="1.7.2"; sha256="02l1b96zv36ia0c97wgcwfhi037mbn3wy9c64hcw0n0w67yj77rr"; depends=[]; }; - mgwrsar = derive2 { name="mgwrsar"; version="0.1"; sha256="13h56fgq3fs28fqh19hwbcza622xd921qnjwcgw2rjwaabqz70w5"; depends=[doParallel foreach htmltools leaflet Matrix nabor Rcpp RcppEigen sp spgwr]; }; + mgss = derive2 { name="mgss"; version="1.2"; sha256="0czzr5hc9sr8yc362q9xag3vphwk1gfahczpya2mh1l6fsa74fbn"; depends=[combinat Matrix Rcpp statmod]; }; + mgsub = derive2 { name="mgsub"; version="1.7.3"; sha256="1mci6x65h94qiz9cwikx2inbrwkykv43zbs8abfbx416zrh2bbn9"; depends=[]; }; + mgwrsar = derive2 { name="mgwrsar"; version="0.1-1"; sha256="03l5k1cb6r657034j84nw28lziij3lwccwc8lzlchfqbq766z4il"; depends=[doParallel foreach htmltools leaflet Matrix nabor Rcpp RcppEigen sp spgwr]; }; mhazard = derive2 { name="mhazard"; version="0.1.2"; sha256="0axapk7rw8vhgmkkr4q9avmlmwi1cdyy0q70447hdp6hx9xg1fd6"; depends=[boot plot3D Rcpp RcppArmadillo rootSolve survival]; }; mhcnuggetsr = derive2 { name="mhcnuggetsr"; version="1.1"; sha256="0fq0niigf4lb6jqcy0w4mkfy65pxrw4brf3pg2nvmgnv3c91lgsb"; depends=[rappdirs reticulate stringr tibble]; }; mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; }; mhtboot = derive2 { name="mhtboot"; version="1.3.3"; sha256="1z0p8ny9lpnrshgas7cad2lv7j0blw0n6ihiimw600n70h73jwrn"; depends=[ggplot2 reshape2]; }; mhurdle = derive2 { name="mhurdle"; version="1.1-8"; sha256="0nnzhcp9ghx2ifaj8lvhvv1acb3dpwi8m9n1al8zjvfg35wmxwwm"; depends=[Formula maxLik survival texreg truncreg]; }; mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; + mi4p = derive2 { name="mi4p"; version="0.7"; sha256="1j877yp06jx0ygj26w9g3vffjsva89119g5dn57pfdy6slziamx0"; depends=[DAPAR emmeans foreach imp4p impute limma mice stringr]; }; miCoPTCM = derive2 { name="miCoPTCM"; version="1.1"; sha256="0bmb06rb53fq8ylcvz693akmz7nkjj50c6ypxsjbfp4crllpi5v9"; depends=[distr MASS nleqslv survival]; }; miLineage = derive2 { name="miLineage"; version="2.1"; sha256="0660vk44ywmj0q2cw7pa2z1r039ncw693dnz7zlgc0ipwak3b0ry"; depends=[data_table geepack MASS]; }; miRNAss = derive2 { name="miRNAss"; version="1.5"; sha256="0j4yvd0j7r98m2msllszlzkzrx67a2z4xpx00zpq90hbr5jykxc4"; depends=[CORElearn Matrix Rcpp RSpectra]; }; miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; }; - miRecSurv = derive2 { name="miRecSurv"; version="1.0.1"; sha256="0wid9p7msfajqirs1p9r2vq6mv2270dnqkfkpff441vgd6b3pbzq"; depends=[COMPoissonReg matrixStats stringi survival]; }; + miRecSurv = derive2 { name="miRecSurv"; version="1.0.2"; sha256="185bkqikkq0maagzwy4y3lxzq8vy1bjz7cz4dhk3v9818dr3fx3g"; depends=[COMPoissonReg matrixStats stringi survival]; }; + miRetrieve = derive2 { name="miRetrieve"; version="1.3.4"; sha256="0y9ycvqyxax4qdn4inwl8jnv77fvhs2i0b4v8nmrcvk1kvb1v8jw"; depends=[dplyr forcats ggplot2 magrittr openxlsx plotly purrr readr readxl rlang scales stringr textclean tidyr tidytext topicmodels wordcloud xml2 zoo]; }; miRtest = derive2 { name="miRtest"; version="1.8"; sha256="0i66s1sz7vf8p8ihfrxmag7wbkw8mlkldcp1w2figlzyhs74c85p"; depends=[corpcor GlobalAncova globaltest limma MASS RepeatedHighDim]; }; miWQS = derive2 { name="miWQS"; version="0.4.4"; sha256="0fmcc86hiz89kdynkzppp9z0srgh4gl8327szivjxadxip4zm21i"; depends=[coda condMVNorm ggplot2 glm2 Hmisc invgamma MASS matrixNormal MCMCpack mvtnorm purrr rlist Rsolnp survival tidyr tmvmixnorm tmvtnorm truncnorm]; }; micEcon = derive2 { name="micEcon"; version="0.6-16"; sha256="1n06an3ir0pf7xdsxnclsxjss6vc57a0yx3rvxjq6j0lssj1ys5z"; depends=[miscTools plm]; }; @@ -11608,15 +12087,16 @@ in with self; { micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-8"; sha256="183hg4iap97is8cdaqxmnj9z8yybvpfnhg2kf85nfy1nl7b30xl2"; depends=[MASS miscTools systemfit]; }; micar = derive2 { name="micar"; version="1.1.2"; sha256="1zx2x6r4m0ihwhjd2n4rmk9da7p9bpadk65h7mbb0rgvwrspkzf8"; depends=[httr jsonlite]; }; mice = derive2 { name="mice"; version="3.13.0"; sha256="11cpyqlilakan2pwjzacb9jjlazazsqdngy237nnrj8j6mky822i"; depends=[broom cpp11 dplyr generics lattice Rcpp rlang tidyr]; }; - miceFast = derive2 { name="miceFast"; version="0.6.9"; sha256="1qk9l6fk8b3wq855ai616bdzfbc6kc2jf4kns0g1p22zv7185dgm"; depends=[assertthat data_table dplyr ggplot2 magrittr Rcpp RcppArmadillo tidyr UpSetR]; }; + miceFast = derive2 { name="miceFast"; version="0.7.1"; sha256="1vlm19b9q6539c9rqa852kkva1j3cfwbxy2y9x8khb8pqk1w0bb7"; depends=[assertthat data_table dplyr ggplot2 magrittr Rcpp RcppArmadillo tidyr UpSetR]; }; miceMNAR = derive2 { name="miceMNAR"; version="1.0.2"; sha256="1s607icaf3c25mn8xdi3zkzmm8m7qd9a6vjdlz5j7ig2gc9f2y2d"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; - miceRanger = derive2 { name="miceRanger"; version="1.3.5"; sha256="07h3ah2z2nnwcs63mhlxvli9a9fsv9pnjbl5d0khgwpn7w4gmyxj"; depends=[corrplot crayon data_table DescTools FNN foreach ggplot2 ggpubr ranger]; }; + miceRanger = derive2 { name="miceRanger"; version="1.5.0"; sha256="0xm8fcvjf6pcfyyk1gnwfdac44q6b33i5byja9lqxy7vygbxmgxd"; depends=[corrplot crayon data_table DescTools FNN foreach ggplot2 ggpubr ranger]; }; miceadds = derive2 { name="miceadds"; version="3.11-6"; sha256="1xh977xralyivmi57c11rpbbbx24dhzwfnjq4m55ikzv2b40678j"; depends=[mice mitools Rcpp RcppArmadillo]; }; - micemd = derive2 { name="micemd"; version="1.6.0"; sha256="1n8kzdf2713dw9mbzvbwl0gknzi9amdqnabfw2wmb70gsvma3f48"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; + micemd = derive2 { name="micemd"; version="1.7.0"; sha256="1xyll8yh57c41qw49g9awfcyxd6jfsb30cvn7i1hyby0yzxzyvcg"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; michelRodange = derive2 { name="michelRodange"; version="1.0.0"; sha256="1pykqb9hmpvn77k0vhfh36iyhamz9h5kpswq3ql31h9nknfy3ixi"; depends=[magrittr]; }; - miclust = derive2 { name="miclust"; version="1.2.6"; sha256="07hr45xg7hg65p40bvda9hhnag5haf1zckp93qg6d81dyf1dnr6g"; depends=[combinat doBy flexclust irr matrixStats]; }; - micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; + miclust = derive2 { name="miclust"; version="1.2.7"; sha256="1kpr798r9dz3rs4ixwzgihjn7a0z3j0nmv76my8mbay84zr2kn74"; depends=[combinat doBy flexclust irr matrixStats]; }; + micompr = derive2 { name="micompr"; version="1.1.1"; sha256="11whyvqyzjdpw2q9yqw21s8paiq992z346zi947mc9d78g1z3djw"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.5"; sha256="1gikp20n2b50fkybbg2hmlfjdcm0imjwygjsjnyv3wrjzypm2i78"; depends=[deSolve]; }; + microSTASIS = derive2 { name="microSTASIS"; version="0.1.0"; sha256="09zyf80l964lfil56vln70i0r2d8ry2ffx4zz3f3xcka22m94r78"; depends=[crayon fmsb future future_apply ggplot2 ggside progressr reshape2 stringr]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; microbenchmark = derive2 { name="microbenchmark"; version="1.4-7"; sha256="1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6"; depends=[]; }; microbial = derive2 { name="microbial"; version="0.0.19"; sha256="0pf8rdr7fdfalx28hqkfzrgwdia956d3cksz58bbf75hsiay8vak"; depends=[Biostrings broom dada2 DECIPHER DESeq2 dplyr edgeR ggplot2 ggpubr magrittr MASS phangorn phyloseq plyr randomForest rlang rstatix S4Vectors SummarizedExperiment testthat tidyr vegan]; }; @@ -11624,7 +12104,7 @@ in with self; { microclustr = derive2 { name="microclustr"; version="0.1.0"; sha256="04xn8p4wgmxq1jbxawq0rhx6l7y1kddlbdfid8zsi4x4arkz7hvp"; depends=[Rcpp]; }; microcontax = derive2 { name="microcontax"; version="1.2"; sha256="004g979hyg0asbah7hxr445fidil4ibw1b8pqpjdbgmpm1qgvw7y"; depends=[microseq]; }; microdemic = derive2 { name="microdemic"; version="0.6.0"; sha256="1w4zh0vagnar95l5b8cgmcvp8q7vk2iba5g8d8g2ywynqiqcx5fc"; depends=[crul data_table httpcode jsonlite tibble]; }; - microeco = derive2 { name="microeco"; version="0.3.3"; sha256="01s1x1npr3i53pzdv842w6w7qrl6yxnbk7svqsiaf7grm1dlb87x"; depends=[ape data_table dplyr ggplot2 magrittr R6 RColorBrewer rlang scales tibble vegan]; }; + microeco = derive2 { name="microeco"; version="0.5.1"; sha256="1g3ifkxdbncrhihf6s8kfx9nv3cx4zfwl4kgg21plhv1prfzcia2"; depends=[ape data_table dplyr ggplot2 magrittr R6 RColorBrewer rlang scales tibble vegan]; }; microhaplot = derive2 { name="microhaplot"; version="1.0.1"; sha256="0g15g7d19yz11nn2g0h8h2m8k1cvmpryz72pnalgv5yi58md5l5i"; depends=[dplyr DT ggiraph ggplot2 gtools magrittr scales shiny shinyBS shinyWidgets tidyr]; }; micromap = derive2 { name="micromap"; version="1.9.4"; sha256="0j3g6fbb6838k8p90x5krq7h82xsafid9yzpqgbdvzg1z3gpvjyq"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; @@ -11632,41 +12112,43 @@ in with self; { microplot = derive2 { name="microplot"; version="1.0-44"; sha256="1sx3544yvv5dxpgqw1582574z1vcxh9rc82x1z37ad7ayzxyyb1v"; depends=[cowplot flextable ggplot2 HH Hmisc htmltools lattice officer]; }; microsamplingDesign = derive2 { name="microsamplingDesign"; version="1.0.7"; sha256="1cd9h331gvapa6p72mlyddrixb0jzka7q10i78fmpc2mcdl7alw0"; depends=[abind deSolve devtools ggplot2 gridExtra gtools knitr MASS matrixcalc matrixStats plyr Rcpp RcppArmadillo readr reshape2 shiny stringr]; }; microseq = derive2 { name="microseq"; version="2.1.4"; sha256="1cjwcg4mzsn2w3js2vhfjzbjax756xbwngw9fyjn1i4zfl0l8fbz"; depends=[data_table dplyr Rcpp rlang stringr tibble]; }; - microservices = derive2 { name="microservices"; version="0.1.0"; sha256="0wrx7k3b9sa40njaqqy9giq8iash7j3ig6wc2d0f848qmlpdahdw"; depends=[config desc dplyr glue purrr withr]; }; - microsimulation = derive2 { name="microsimulation"; version="1.3.4"; sha256="1lpprq94kddymvwkrqlz3x101cp6sdz1k3y9648jib4kjhfzgnr5"; depends=[ascii BH Rcpp]; }; + microservices = derive2 { name="microservices"; version="0.1.2"; sha256="18inmqwdb2cz0i0q9rh7mm3bi0hg193kkipbzhgk0bk8i8gkdy84"; depends=[config desc dplyr glue purrr withr]; }; + microsimulation = derive2 { name="microsimulation"; version="1.3.5"; sha256="0fg3b1jq3igv6y76d97wjzwy7gxscbislfiv7kpc694i32hphygz"; depends=[ascii BH Rcpp]; }; microsynth = derive2 { name="microsynth"; version="2.0.31"; sha256="0wmrp9igylzp4qbvdr13r2rxfkcq9xwg8gw29j1g6kcqyq4aflds"; depends=[boot kernlab LowRankQP nleqslv pracma survey]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; - midasml = derive2 { name="midasml"; version="0.1.4"; sha256="1drgkcd9c10w216n80m3d5zskm1nw1wc2qfyfypl9l74rglkl9yk"; depends=[foreach lubridate Matrix mcGlobaloptim]; }; + midasml = derive2 { name="midasml"; version="0.1.5-1"; sha256="1glz7v7ai9hz1yr27j3zzx0j7b959jssw4d9h1n08rdd8akir5g4"; depends=[foreach lubridate Matrix mcGlobaloptim]; }; midasr = derive2 { name="midasr"; version="0.8"; sha256="0mzyxf8q2wmbsiczkhhgigy7jmi8zr4w4a83f97va35vfhxi217k"; depends=[forecast Formula MASS Matrix numDeriv optimx quantreg sandwich texreg zoo]; }; midastouch = derive2 { name="midastouch"; version="1.3"; sha256="1pjzcf0hjfhr5p0la8pz1njw7bhfrcrzpqfsdqk2z5c6dbh4awzq"; depends=[]; }; midrangeMCP = derive2 { name="midrangeMCP"; version="3.1.1"; sha256="1yfwyglyxxk4i914m8n148cjydlcg7r16zl8acb1w8h963svirk9"; depends=[SMR writexl xtable]; }; mifa = derive2 { name="mifa"; version="0.2.0"; sha256="1rj3ba746f8759gird0vpvyb4fl0z2ihccpiv3qkr3sc64wgplln"; depends=[checkmate dplyr mice]; }; - migest = derive2 { name="migest"; version="1.8.3"; sha256="1n4wpplcz4w8avzv0dilh14r6h80wfjdinqwiqkhr7arx1sls48l"; depends=[dplyr magrittr purrr stringr tibble tidyr]; }; - migraph = derive2 { name="migraph"; version="0.6.3"; sha256="0hcg1ij3n09flb6gwvcydqndq9m8mrg9shszikg3bpgzc2yc7v3x"; depends=[dplyr ggplot2 ggraph igraph magrittr network purrr R6 rlang tibble tidygraph tidyr]; }; + migest = derive2 { name="migest"; version="2.0.0"; sha256="05rw0z149pafna8kjms33hk1bggrjhv4x3d4j4c55qih4kjs2m3i"; depends=[dplyr forcats ggplot2 magrittr matrixStats migration_indices purrr stringr tibble tidyr]; }; + migraph = derive2 { name="migraph"; version="0.7.1"; sha256="1r55s4drfc2nvlkmxry5x1nc9iasach4nvqj77pmj2r6hnxqd6dx"; depends=[dplyr ggplot2 ggraph gridExtra httr igraph jsonlite lubridate magrittr network purrr rlang stringr tibble tidygraph tidyr]; }; migrate = derive2 { name="migrate"; version="0.3.0"; sha256="064f2bmhl0f841pkgdzpcn9k50192vmbfngdy7wg9a0h0jb40ga4"; depends=[crayon dplyr magrittr rlang stringr tibble tidyr]; }; migration_indices = derive2 { name="migration.indices"; version="0.3.0"; sha256="0h0yjcj70wzpgrv3wl1f2h2wangh1klsllq0i0935plgzw736mwd"; depends=[calibrate]; }; migrbc = derive2 { name="migrbc"; version="2.0.9"; sha256="1nbxdm70a9lvbp4sw78719hdpbqnziw1y7r4xk8i390q2c195am1"; depends=[dplyr futile_logger lubridate Rcpp stringr]; }; migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; miic = derive2 { name="miic"; version="1.5.3"; sha256="1wrvgzi91jirn5n5fvvbhhpcga7l75h149sz1g1r1wbci181l3bg"; depends=[ppcor Rcpp scales]; }; - mikropml = derive2 { name="mikropml"; version="0.0.2"; sha256="0qgycgk0rw2bp3kbv4n42nidgkhjgd2114cc23lk178qm28r17nd"; depends=[caret dplyr e1071 glmnet kernlab MLmetrics randomForest rlang rpart xgboost]; }; + mikropml = derive2 { name="mikropml"; version="1.1.1"; sha256="0hkxb21yamvarxlh5m0356a02ijdbq8g1dnmjjd7lcndf9pxzg9d"; depends=[caret dplyr e1071 glmnet kernlab MLmetrics randomForest rlang rpart xgboost]; }; milorGWAS = derive2 { name="milorGWAS"; version="0.3"; sha256="1z44sbs3lmrx32wagk5rr3rc2k8iqq860fz0bi983llmgmhaqdxn"; depends=[gaston Rcpp RcppEigen]; }; milr = derive2 { name="milr"; version="0.3.1"; sha256="03hihr1w5j0mlvi5vm9m5vb9i6nyb6lsji3xmv0chpczabd85mzy"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; }; - mime = derive2 { name="mime"; version="0.10"; sha256="1xz37fizlx4w3g8kbim7vr5slqd6cmaq5sa0s4q7ayl1bahk6ckq"; depends=[]; }; + mime = derive2 { name="mime"; version="0.11"; sha256="1h7fz0rqnp970r9q0d95qcxpxm9mb98rqhcdncx0w2qdkyj2fm11"; depends=[]; }; mimi = derive2 { name="mimi"; version="0.2.0"; sha256="1ig34qd37my74nmlv3jcfrj7cnd55alxpf2flf2sssk2ws1y56xh"; depends=[data_table doParallel FactoMineR foreach glmnet rARPACK softImpute]; }; mimsy = derive2 { name="mimsy"; version="0.6.2"; sha256="01dy1fryrgq07jdfnxcnks97h0gq632dvqk7hnfs0f5fnx0k0vvf"; depends=[dplyr lubridate magrittr openxlsx]; }; minMSE = derive2 { name="minMSE"; version="0.3.1"; sha256="0xzd2hw7ga5fi54d35vr9n3sbnp6acak27fl4lv089sn1ig6s95p"; depends=[MASS]; }; - mindicador = derive2 { name="mindicador"; version="0.1.5"; sha256="0y829cmv4sp3s6ygjy1y9ddh2pqlwi0qmndv43s0dhmjick88yyz"; depends=[crul data_table digest jsonlite memoise xts]; }; + minSNPs = derive2 { name="minSNPs"; version="0.0.1"; sha256="0kj3kalr11c4jab9b5w0i2w2z0dsdmm22szgfzyrc3y2w6jdhvjw"; depends=[BiocParallel]; }; + mind = derive2 { name="mind"; version="0.1.4"; sha256="0zalbxd4mbi5snidz60pdnm1bkgbp5pabwc4p3qfvix6ll863kmc"; depends=[data_table dplyr JWileymisc MASS Matrix qdap]; }; mindr = derive2 { name="mindr"; version="1.2.3"; sha256="1slglva5ipbzj748k7rxvlw6g2iqdkvyf8qnplnzcjc2qsjljd1q"; depends=[data_tree htmlwidgets jsonlite knitr]; }; mineCitrus = derive2 { name="mineCitrus"; version="1.0.0"; sha256="031nfhrsc5rlqls3vyrk18lx0pd4ssdk96cmfr4ifaciz0rgv8h2"; depends=[ggplot2]; }; - minerva = derive2 { name="minerva"; version="1.5.8"; sha256="0k4ww3qfqrsnkccxk9dyq39xrc42g8gvj5g8drglg4fyci7jfs9h"; depends=[Rcpp RcppArmadillo]; }; + minerva = derive2 { name="minerva"; version="1.5.10"; sha256="03srkii3rmx40lyr050bnrxil6w0hfv5pr64k339m66ciwyka9ig"; depends=[Rcpp RcppArmadillo]; }; miniCRAN = derive2 { name="miniCRAN"; version="0.2.14"; sha256="1i1rf97m7c8x65rfy8c26l0kbl4zq7ha1f9yi413fk9jlngxajj3"; depends=[assertthat httr igraph]; }; miniGUI = derive2 { name="miniGUI"; version="0.8-1"; sha256="0qb2fbkjwzn909yrk89d4951bwf8n05i0s265l8v2d4lpns9hc2i"; depends=[]; }; miniMeta = derive2 { name="miniMeta"; version="0.2"; sha256="03r6xwcgchw42irqr8jy5hsbv8brk6f77h4zi9qhhz3zmkryjbw2"; depends=[colourpicker jsonlite markdown meta metafor readxl rhandsontable shiny shinyjs shinyWidgets WriteXLS]; }; miniUI = derive2 { name="miniUI"; version="0.1.1.1"; sha256="1h5h2sc57h95d6bsgs95l26911g38hvjc1v50bc31xl9689l2as5"; depends=[htmltools shiny]; }; - minidown = derive2 { name="minidown"; version="0.1.1"; sha256="1j8hnhw9q4wsd308cb438598hbm8d7ivlig5ydpwrjn5xnkysj5x"; depends=[htmltools knitr rmarkdown xfun]; }; + minidown = derive2 { name="minidown"; version="0.2.0"; sha256="18s7p3fdiichz4jfx9v73ddx6gsbvh8n85v0jmnkmz4pkxx371dr"; depends=[htmltools knitr mime rmarkdown xfun]; }; minimalRSD = derive2 { name="minimalRSD"; version="1.0.0"; sha256="1p1jpi8lnv952k4c1wjgbgpb0hv4zg0f9qrd43cx0caibkqvhzf7"; depends=[]; }; minimap = derive2 { name="minimap"; version="0.1.0"; sha256="0y5yzic9pwpzs01gnl82syankijcjp85n22jn5zda0bp3y01r53r"; depends=[]; }; minimax = derive2 { name="minimax"; version="1.0"; sha256="1g0d9q5h1avbb0yg7ajw5330820i3n5cgkpsif754l4j3ikya8p3"; depends=[]; }; + minimaxdesign = derive2 { name="minimaxdesign"; version="0.1.5"; sha256="0mraklk79w2r4rx450pkajgh5s9pk7wa3gcbd98xkd03ns11s9v8"; depends=[conf_design DiceDesign DoE_base doParallel doSNOW foreach FrF2 geometry gmp gtools jpeg MaxPro nloptr pdist randtoolbox Rcpp RcppArmadillo]; }; minimist = derive2 { name="minimist"; version="0.1"; sha256="007y829d766b1v6wkrhk7pkg99r38bvmhc8bwvs8rs13dr7444ln"; depends=[V8]; }; minpack_lm = derive2 { name="minpack.lm"; version="1.2-1"; sha256="18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"; depends=[]; }; minqa = derive2 { name="minqa"; version="1.2.4"; sha256="036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg"; depends=[Rcpp]; }; @@ -11674,16 +12156,17 @@ in with self; { minval = derive2 { name="minval"; version="0.8-1"; sha256="11sr69hmqnh5g2zbfajy3wqc57759basky1w72dnrd38rq50llxs"; depends=[]; }; minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; mipfp = derive2 { name="mipfp"; version="3.2.1"; sha256="1gxazpg81vj5dywpb6jb29188jw28qil6pfygawa7znnjn3k5ca6"; depends=[cmm numDeriv Rsolnp]; }; + mipplot = derive2 { name="mipplot"; version="0.3.1"; sha256="126arvxq6gmaiwk3n3p0slnb1mhs3qf993m4lx95nlmnv612ag66"; depends=[data_table dplyr ggplot2 readr readxl reshape reshape2 rlang shiny shiny_i18n shinyalert shinyWidgets showtext showtextdb stringr tidyr]; }; mipred = derive2 { name="mipred"; version="0.0.1"; sha256="0kijn2xj0dh28rm2sjgd8j1a3c5avc3fjfvvcmzfasvxqdjflv6j"; depends=[mice]; }; - miraculix = derive2 { name="miraculix"; version="0.9.20"; sha256="0s5r7ikym3s85706wznfc3lh3ap95pv1p2796bi1n19ivd671myc"; depends=[RandomFieldsUtils]; }; - mirt = derive2 { name="mirt"; version="1.33.2"; sha256="06m76xcfyffhfxk8wjyfaqnhb56bxhr19brm3556kfds2v75wnlm"; depends=[dcurver Deriv GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; - mirtCAT = derive2 { name="mirtCAT"; version="1.10"; sha256="1wf4m4m3lyd57hy0v5jsci2k8cgzl087svpccmhxvp1chfjn7iw2"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; + miraculix = derive2 { name="miraculix"; version="0.9.23"; sha256="0i08v5hq43296k3sa7akpq4h5dmvpkgn7cfpqwdyp0qaxkqk0k0s"; depends=[RandomFieldsUtils]; }; + mirt = derive2 { name="mirt"; version="1.34"; sha256="197jjiqwlvd457zkwi36vsr2hqix80skx54clkal8jb34vvls4j7"; depends=[dcurver Deriv GPArotation lattice Matrix mgcv Rcpp RcppArmadillo vegan]; }; + mirtCAT = derive2 { name="mirtCAT"; version="1.11"; sha256="0h7yc72nc8xz5z4a0b7149n3r69fr6v1n8gsn01xc5107zcip8xm"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; mirtjml = derive2 { name="mirtjml"; version="1.4.0"; sha256="1zvm8acywpzi87lz0hpxmr8c9kyqkbx0490q3vlwxd90ffcdp9ml"; depends=[GPArotation Rcpp RcppArmadillo]; }; mirtsvd = derive2 { name="mirtsvd"; version="1.0"; sha256="0c06dpg0jr15hmk03s96fyp2rb6z4svihjzfs316nkl3dd03ami1"; depends=[GPArotation mirtjml]; }; misaem = derive2 { name="misaem"; version="1.0.1"; sha256="05m7k8mgbpkv5szislvf3q45pk5f8z54ibddhi8pkhwa9w00xkjk"; depends=[MASS mvtnorm norm]; }; misc3d = derive2 { name="misc3d"; version="0.9-0"; sha256="10jf5r1x588vi54bzaqgi9mgcqlkiga2c3jvmqmk3lavc8fjksd1"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-5"; sha256="0g6wk2zxqq6j949hnbvwmfd72y25zjfbrfrfxsj21q84w41fgjkb"; depends=[MASS MCMCpack mvtnorm R2jags]; }; - miscFuncs = derive2 { name="miscFuncs"; version="1.3"; sha256="0wn7i9656km53wlml360qgpzqxlv1jsjnh4swhqgf5dyjva8i141"; depends=[mvtnorm roxygen2]; }; + miscFuncs = derive2 { name="miscFuncs"; version="1.5-2"; sha256="17vy9934ndd8wyhvnyixp2j7ckrksgyx2y8kgvryyp3xxw3bxsz7"; depends=[mvtnorm roxygen2]; }; miscIC = derive2 { name="miscIC"; version="0.1.0"; sha256="0pnwc3b318xxnmb7scrj4qkqlvqfyczspdg496kl0ixsiaafr1ad"; depends=[nnls]; }; miscTools = derive2 { name="miscTools"; version="0.6-26"; sha256="16pwfxpyl0zv3hjxx2kjchkg7p6kbj0s2rrpskj7rkhjr9imlg5y"; depends=[digest]; }; misclassGLM = derive2 { name="misclassGLM"; version="0.3.2"; sha256="1b344dy5fm45jkjrqcx16905n9x0iwihr73mq2m0qfq7ay87nsrh"; depends=[bigmemory foreach MASS Matrix mlogit numDeriv ucminf]; }; @@ -11695,28 +12178,29 @@ in with self; { misreport = derive2 { name="misreport"; version="0.1.1"; sha256="1f78zcw4cg51mjvflhwd64hip2gj8x9ng1mhh4w43yv3x8hmbd6h"; depends=[mvtnorm numDeriv VGAM]; }; missCompare = derive2 { name="missCompare"; version="1.0.3"; sha256="03j69xw54d076znx19dplw4xznvgky90hxh3wgypg0g5pjg63y53"; depends=[Amelia data_table dplyr ggdendro ggplot2 Hmisc ltm magrittr MASS Matrix mi mice missForest missMDA pcaMethods plyr rlang tidyr VIM]; }; missDeaths = derive2 { name="missDeaths"; version="2.7"; sha256="1c8vbc7r1g4dkngmal6iqg7piw656h1vc6cmpkv16vjn4j0w2n2c"; depends=[cmprsk MASS mitools Rcpp relsurv rms survival]; }; + missDiag = derive2 { name="missDiag"; version="1.0.1"; sha256="04zd3nds44sy7nz73kdq9wjis3r9zyp0kda54mfqps1sh9jnizlq"; depends=[cobalt Formula]; }; missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; missMDA = derive2 { name="missMDA"; version="1.18"; sha256="1s7ph89y0mrksdi73nnjnxl2354401ny8ziijzf036rcsiyvl8m5"; depends=[doParallel FactoMineR foreach ggplot2 mice mvtnorm]; }; missMethods = derive2 { name="missMethods"; version="0.2.0"; sha256="0rsx7fdg0k8ajpj81ybl2jc9s8sprc2si6zx7mkvcqgw9iacrdik"; depends=[]; }; missRanger = derive2 { name="missRanger"; version="2.1.3"; sha256="1kk64q9ip6hhjcyrvnm5yd8ikilrvvw1vjz8166c6jb8xrqwbb2v"; depends=[FNN ranger]; }; - missSBM = derive2 { name="missSBM"; version="0.3.0"; sha256="0dmmci35nriy0rxkrcn2rz93nndz836dbil9yfpdz3zvp1pyihdj"; depends=[ape corrplot ggplot2 igraph magrittr nloptr R6 Rcpp RcppArmadillo rlang sbm]; }; + missSBM = derive2 { name="missSBM"; version="1.0.1"; sha256="1hy9q27sqgasd60davx53z33m8f3ilzrlqv0xcrpd84l8ahi6wrk"; depends=[future_apply ggplot2 igraph magrittr Matrix nloptr R6 Rcpp RcppArmadillo rlang sbm]; }; missingHE = derive2 { name="missingHE"; version="1.4.1"; sha256="1bxpp88rwnv4fc9lm606cczj1dx63p507sqsr71dblgsfw3aw7xy"; depends=[bayesplot BCEA coda ggmcmc ggplot2 ggpubr ggthemes gridExtra loo mcmcplots mcmcr R2jags]; }; mistat = derive2 { name="mistat"; version="2.0.3"; sha256="068ycnnkqcmf3sracsa279lggyc1qxdkpcba7ghax0xl4y505yxj"; depends=[]; }; mistr = derive2 { name="mistr"; version="0.0.4"; sha256="0jb0qmraghn8gy1bxmfh0jnbfp0b38bxidl0cxkxg9lbfmi0irlq"; depends=[bbmle]; }; mistral = derive2 { name="mistral"; version="2.2.1"; sha256="19iq9a3k7xyxafvm73ib8mj1k7ys69aznplqhidl5z8vdl92dmb7"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog Rcpp]; }; - misty = derive2 { name="misty"; version="0.3.2"; sha256="17fqkxl9kmkjzl6axgrgk17j5ah8l1f29mf399ak3vhaccvblaqi"; depends=[haven lavaan lme4 readxl]; }; - mitml = derive2 { name="mitml"; version="0.4-1"; sha256="1bw92fl6xp3yvawh3nbjzs4hp4alpwj6vnv6lsysd74aqndw447c"; depends=[haven jomo pan]; }; + misty = derive2 { name="misty"; version="0.4.2"; sha256="0mi5xgv3ysr4c14vsm4c5034s2f16026glm22qi7azarpvgc5ckr"; depends=[haven lavaan lme4 norm readxl]; }; + mitml = derive2 { name="mitml"; version="0.4-2"; sha256="0zrmchsk012linw3m5rda6hj8xpxpwzbf4alq0nc1pzvl99aa558"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.4"; sha256="0c2x2n1p53lcw0vx4vmy5j7m2f95i7g2iwbryl89imr99rvz617j"; depends=[DBI]; }; - mitre = derive2 { name="mitre"; version="0.6.0"; sha256="036zqniv4r46gglrschmgdgagwik4j2ffbr7jrcshi0dbnafr3rp"; depends=[dplyr httr igraph jsonlite plyr RJSONIO rlang rvest stringr tidyr xml2 yaml]; }; + mitre = derive2 { name="mitre"; version="1.0.0"; sha256="0r5phzxiibwwhx3qh623grfy070c3vzm4q07rzhsp5q5ycb5jhn5"; depends=[dplyr igraph jsonlite plyr RJSONIO rlang stringr tidyr]; }; mix = derive2 { name="mix"; version="1.0-10"; sha256="0z16ddbh79kqxi64bl1h2sd8anpgc48n9d1nyr2zlln39nhv8w8g"; depends=[]; }; mixAK = derive2 { name="mixAK"; version="5.3"; sha256="12vhg3qaz39hcc581gn0wfmcxj1yhggcsqic4ngy4gpmrg27yls0"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; mixAR = derive2 { name="mixAR"; version="0.22.5"; sha256="09r6zzfckwqh9giiw7y24aip3cgdwdv2q9xx4mjbfim5hrjai81k"; depends=[BB combinat e1071 fGarch gbutils MCMCpack mvtnorm permute Rdpack timeDate]; }; mixComp = derive2 { name="mixComp"; version="0.1-2"; sha256="01zgf31mmnjnwwji9yadfhwa49xy4i3wf0f5glifmpnvmr6d7y1d"; depends=[boot cluster expm kdensity matrixcalc Rsolnp]; }; mixEMM = derive2 { name="mixEMM"; version="1.0"; sha256="0344ay1avi37kvh5w9bknayx67yh7rflj6zhw68d2888v7cbghjy"; depends=[]; }; mixIndependR = derive2 { name="mixIndependR"; version="1.0.0"; sha256="0wjzs56axdjas2a9ynw3gd78h0fgcfjpx3bk7nm895lmadyzih6y"; depends=[data_table]; }; - mixKernel = derive2 { name="mixKernel"; version="0.5"; sha256="1c11lppkxs8l23f700qkgp128a61c5v7iwr0zq6fy0jggzbz8vql"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog reticulate vegan]; }; + mixKernel = derive2 { name="mixKernel"; version="0.7"; sha256="02llsy2y45qsbzvz8bx66ijf2pl7aiy3dc3ni7jyzbnc3gfsjh2c"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog reticulate vegan]; }; mixPHM = derive2 { name="mixPHM"; version="0.7-2"; sha256="1wvkdb9zj2j8dpppnyins05rg877zbydqsl3qaan62wznkknxcac"; depends=[lattice survival]; }; - mixR = derive2 { name="mixR"; version="0.1.1"; sha256="1xd3v5rk59380zh7r6l5blmcy4gib9xp44j5dcrk6ivs6fgycsxh"; depends=[ggplot2 Rcpp]; }; + mixR = derive2 { name="mixR"; version="0.2.0"; sha256="1iarsys7jyi3zck01y7415xwyd1knnh1fkc8z4ipfd63nnlm2pqc"; depends=[ggplot2 Rcpp]; }; mixRasch = derive2 { name="mixRasch"; version="1.1"; sha256="1r067pv7b54y1bz8p496wxv4by96dxfi2n1c99gziqf5ramx3qzp"; depends=[]; }; mixRaschTools = derive2 { name="mixRaschTools"; version="1.1.1"; sha256="1giq6d97sg6f66sh0gw6x1f2ax4ys91kfnrlpdv37m7qakk5npyj"; depends=[]; }; mixSPE = derive2 { name="mixSPE"; version="0.9.1"; sha256="18lxivrjhh7h0l9hj0x7r8qxv1dwsad2bkswg73n0a95zf6lgn87"; depends=[mvtnorm]; }; @@ -11730,45 +12214,46 @@ in with self; { mixedMem = derive2 { name="mixedMem"; version="1.1.2"; sha256="1p0gplfcn663xp40dk0yg70qffn1fwa9gxv7bppflgm9wkn8g3l5"; depends=[BH gtools Rcpp RcppArmadillo]; }; mixedsde = derive2 { name="mixedsde"; version="5.0"; sha256="0ss1ng4nx91gxj85wxxfyh9ljxsj3ag6lsj1a5d2815p9jzl7dsv"; depends=[MASS moments plot3D sde]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; - mixl = derive2 { name="mixl"; version="1.2.3"; sha256="1wy88lxkxd7fhchfqbciccj3ag5sks0iwhlfpqk2ddqviibar3nd"; depends=[maxLik numDeriv randtoolbox Rcpp readr sandwich stringr]; }; + mixl = derive2 { name="mixl"; version="1.3.2"; sha256="0adxbwh8zlcg076baj5b5dglfsphliz5gz9xk82xkbnlqawmj33k"; depends=[maxLik numDeriv randtoolbox Rcpp readr sandwich stringr]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; mixlm = derive2 { name="mixlm"; version="1.2.5"; sha256="0k7sy2bkf6vsp5qkz33327p1kjyzn3cxmxzc6dmw6g29c4dyxkac"; depends=[car leaps multcomp pls pracma]; }; - mixmeta = derive2 { name="mixmeta"; version="1.1.1"; sha256="19hfsh6cmgklfyws992qm0vn31frwg2ivwp89lrx5kvhkbc4xicz"; depends=[]; }; - mixor = derive2 { name="mixor"; version="1.0.4"; sha256="1l296z0a3kamb1m94pfx3vczp36pa0np101fy5c23kh45s59pbs7"; depends=[survival]; }; + mixmeta = derive2 { name="mixmeta"; version="1.1.3"; sha256="1llqc1kq7m985mcgj81dlqd3dsfw5klvfz3rw685vkvz2qh53nwp"; depends=[]; }; mixpoissonreg = derive2 { name="mixpoissonreg"; version="1.0.0"; sha256="1pk45p96kwl3gvi5523vm824s1bb5aqpn9qqpqy8kjy2pd2a4k32"; depends=[dplyr Formula gamlss gamlss_dist generics ggplot2 ggrepel gridExtra lmtest magrittr pbapply Rfast rlang statmod tibble]; }; mixreg = derive2 { name="mixreg"; version="0.0-6"; sha256="04g863yxrlj0wqsmzzxph5110g3gjk094r59zzk0b9r89m8vhpsl"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; - mixsmsn = derive2 { name="mixsmsn"; version="1.1-8"; sha256="102lsr55bqfvv389wd07k3jqc5kpzvfmm5rpx23rb8rqw42wkffh"; depends=[mvtnorm]; }; + mixsmsn = derive2 { name="mixsmsn"; version="1.1-9"; sha256="1mcld8wm5sxsgsjyc7vn46hb4jvv2s9ykbwpd54vambfazpvvnmi"; depends=[mvtnorm]; }; mixsqp = derive2 { name="mixsqp"; version="0.3-43"; sha256="1qics04w0swyp216d6g8dmsph8q2kpadpacp66h2qih3521js12q"; depends=[irlba Rcpp RcppArmadillo]; }; mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; mixtools = derive2 { name="mixtools"; version="1.2.0"; sha256="08whic8hmmzi55b7azwj11l2x5r9s5qbyrv7s9jr08156vqkw0zg"; depends=[kernlab MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; + mixtur = derive2 { name="mixtur"; version="1.2.0"; sha256="1kdzhjad6bwg6ga4bm545iw147h6zhj1a038ajlnbgynd9j8h8nh"; depends=[dplyr ggplot2 RColorBrewer rlang tidyr]; }; mixture = derive2 { name="mixture"; version="2.0.4"; sha256="1kmvz7n5gif64awmrzwj3bbfbvl099047gygsvbwfjwnwazq3fah"; depends=[BH lattice Rcpp RcppArmadillo RcppGSL]; }; mize = derive2 { name="mize"; version="0.2.4"; sha256="1dfhldxsm1il9avfxvaiir9r878dp7swyc9c8ilm6llx208sd5d5"; depends=[]; }; - mizer = derive2 { name="mizer"; version="2.1.0"; sha256="1ixpz3mifaiaadmsfp1wi7m3kmnya9324nnhzkji8vcq2y9jsccy"; depends=[assertthat deSolve dplyr ggplot2 lifecycle plotly plyr progress Rcpp reshape2]; }; + mizer = derive2 { name="mizer"; version="2.3.0.1"; sha256="1v82ydz6y5vh72q82mxwprymvil7cv6l8lj5y44llkixvhl1ib15"; depends=[assertthat deSolve dplyr ggplot2 ggrepel lifecycle lubridate plotly plyr progress Rcpp reshape2 rlang]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="1.0.4"; sha256="0jxgzaznzxs3vqhc5ax66gjkgw8zqvpd7j8mf0k6bmxyhwgb96xr"; depends=[deSolve inline lmtest nlme numDeriv pkgbuild purrr R6]; }; + mkin = derive2 { name="mkin"; version="1.0.5"; sha256="1nxdzll5v8551sgq0whqs2270lzvw923rl0kxvxbcwnsz27z26da"; depends=[deSolve inline lmtest nlme numDeriv pkgbuild purrr R6]; }; mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; - mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; mlVAR = derive2 { name="mlVAR"; version="0.4.4"; sha256="0ib566qygm28lqhr3w9vzfxnpsmazlipzrfsdm3cw21wpz2lvxcr"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; mlbench = derive2 { name="mlbench"; version="2.1-3"; sha256="157iqsld0wj8g8cbs7nh6p2x6kasmkhs3078hsmqac946gk2pydi"; depends=[]; }; mlbstats = derive2 { name="mlbstats"; version="0.1.0"; sha256="1pfsc1pc5986gykx8l6afahszhaj4940l8g33fdxyy7194kbcz70"; depends=[]; }; + mlbstatsR = derive2 { name="mlbstatsR"; version="0.1.0.3"; sha256="0rcjfbi383rdk2fyrw47ni0jrzp7yj2sr8xzxvk3gmh321i3pn5d"; depends=[dplyr ggplot2 ggtext glue httr janitor jsonlite purrr rvest stringr tibble tidyr xml2]; }; mldr = derive2 { name="mldr"; version="0.4.3"; sha256="07lbxpydz78fya11bl3l1ckhbps3nx43ddh3z09ygg70jjbdhxwq"; depends=[circlize shiny XML]; }; mldr_datasets = derive2 { name="mldr.datasets"; version="0.4.2"; sha256="0zyfv8xy5yik0k3j0kf9r43xrvj528qzdb1v74sfi24vim6k6503"; depends=[]; }; mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; }; mleap = derive2 { name="mleap"; version="1.1.0"; sha256="0s15srbnk8fs5vj12gdszpg6g563q17v42fng2rydkgi4q7m2vj6"; depends=[digest fs jsonlite purrr rJava sparklyr tibble]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; mlegp = derive2 { name="mlegp"; version="3.1.8"; sha256="1sbdk3pybzhv2jycl56s6m86pp3qbfh8q0kmhn153130b84dzhga"; depends=[]; }; - mlergm = derive2 { name="mlergm"; version="0.7"; sha256="1z757h5n8npl57c0wvh8njqbn0qdbwlc4c4gi03wzrn94vklb9ql"; depends=[cowplot ergm GGally ggplot2 lpSolve Matrix network plyr reshape2 sna stringr]; }; + mlergm = derive2 { name="mlergm"; version="0.8"; sha256="0bpdljmbn4lfm263jcsp0hrknixn49m7hqsx0jjk3pfwhgjlajh8"; depends=[cowplot ergm GGally ggplot2 lpSolve Matrix network plyr reshape2 sna stringr]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlf = derive2 { name="mlf"; version="1.2.1"; sha256="09ihnibpknpp26hdlbxyr99yz7z0n8qpsjs5aq3zngng0yh3wdn9"; depends=[]; }; - mlflow = derive2 { name="mlflow"; version="1.16.0"; sha256="1yn1hrnfvjkcpl2d3zp465jrpzkdvnwvf3lmp0rjd4hmhapjlfgy"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; + mlfit = derive2 { name="mlfit"; version="0.5.2"; sha256="12dm7dxd7n9nca627m1qxpk8s31wyb03qwg2mbsk0h369ng88f79"; depends=[BB dplyr forcats hms kimisc lifecycle Matrix plyr rlang tibble wrswoR]; }; + mlflow = derive2 { name="mlflow"; version="1.20.2"; sha256="1m11vn9ip9fsd7amn1j0l7bsrb1jiapnspbbnpbcg860z37jaix9"; depends=[base64enc forge fs git2r glue httpuv httr ini jsonlite openssl processx purrr reticulate rlang swagger tibble withr xml2 yaml zeallot]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-8"; sha256="0ln4nazhc1prnlmvhfzhx268vx3klb0xnz1nsiwh0pwyskskyzym"; depends=[lme4]; }; - mlma = derive2 { name="mlma"; version="6.0-1"; sha256="085ci7a745y7zd7hy4a0bc2xni2yqsixpzc00lsmjwz807yv6cdf"; depends=[abind car coxme gplots lme4 survival]; }; + mlma = derive2 { name="mlma"; version="6.1-1"; sha256="1z3v00g7ji0xkpz9ri4li3r7s8g2rcp2pc1p060cwsaidizs38dr"; depends=[abind car coxme gplots lme4 survival]; }; mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; mlmi = derive2 { name="mlmi"; version="1.1.0"; sha256="09c4gxbi561ms30nhjjvmw94l1hzh6j64gp9cq4c5zf2f0fsgzyc"; depends=[cat gsl MASS Matrix mix nlme norm]; }; mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.6"; sha256="14xp8k7sww1skyw5l2006gpaw2c6yrri5nmfx4yav4vqdlhcj2k1"; depends=[coxme Matrix multcomp multcompView sommer]; }; @@ -11778,31 +12263,32 @@ in with self; { mlpack = derive2 { name="mlpack"; version="3.4.2.1"; sha256="0fqpajcmqn9rijzjg7qj0zd2lik4xmhp5dmhbm3mdc9ssdg0axbr"; depends=[BH Rcpp RcppArmadillo RcppEnsmallen]; }; mlquantify = derive2 { name="mlquantify"; version="0.1.5"; sha256="00fxsg5p1fv1x102gz4541swinbc3c592qlfp123hy25h4bgdarj"; depends=[caret randomForest]; }; mlr = derive2 { name="mlr"; version="2.19.0"; sha256="04v1br59ykzhzaiybjyyknbrc7ai5nl5l106b7482r49afscjj8i"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; - mlr3 = derive2 { name="mlr3"; version="0.11.0"; sha256="0qh9vdac1als2123wf51bwa7spdqk33iydlawi5n5dpci892iahl"; depends=[backports checkmate data_table digest future_apply lgr mlbench mlr3measures mlr3misc palmerpenguins paradox parallelly R6 uuid]; }; + mlr3 = derive2 { name="mlr3"; version="0.12.0"; sha256="0nimwczsgrj29r9qrlz32qc3fkj02369zql7jhkrn3lk3mfy5zmz"; depends=[backports checkmate data_table future future_apply lgr mlbench mlr3measures mlr3misc palmerpenguins paradox parallelly R6 uuid]; }; mlr3benchmark = derive2 { name="mlr3benchmark"; version="0.1.2"; sha256="05b3x43xnj9byg6f70br6i21jdxbwlc66qmjqrrllp6vsixzc4vp"; depends=[checkmate data_table ggplot2 mlr3misc R6]; }; - mlr3cluster = derive2 { name="mlr3cluster"; version="0.1.1"; sha256="15jaydpsdwpz6mmqqilx9vzz7ycs8h6cyw18i2hz8ikhwwp9nsbi"; depends=[backports checkmate clue clusterCrit data_table mlr3 mlr3misc paradox R6]; }; - mlr3data = derive2 { name="mlr3data"; version="0.3.1"; sha256="109jdv9kdivpac2lbj18d1lr3x7yzii7rglg0w6ll9034ynwja3r"; depends=[]; }; + mlr3cluster = derive2 { name="mlr3cluster"; version="0.1.2"; sha256="15sbxpp3lawh30dh3hznig12xp68p83p4rz6si6b6jjddcgsw3rq"; depends=[backports checkmate clue clusterCrit data_table mlr3 mlr3misc paradox R6]; }; + mlr3data = derive2 { name="mlr3data"; version="0.5.0"; sha256="1bck1rsnp4a9bkzyjrdxn1n12lkgkj0gwiwxrf9maj0l8x3kfpyw"; depends=[]; }; mlr3db = derive2 { name="mlr3db"; version="0.4.1"; sha256="0b1488iw4hismhirylf4qi9pn6qwh8125pxkd5fds5l50wc5m59l"; depends=[backports checkmate data_table digest mlr3 mlr3misc R6]; }; - mlr3filters = derive2 { name="mlr3filters"; version="0.4.1"; sha256="11mr6b7g3zg9r72wmq9n34s44lk7limciiqs5x2mmjdfql6jxlxi"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; - mlr3fselect = derive2 { name="mlr3fselect"; version="0.5.1"; sha256="0s10cx0naz39gxdqfii6wqw1qip6ln1dhbqjgwpkpm3bh6c2dqgf"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3pipelines paradox R6]; }; - mlr3hyperband = derive2 { name="mlr3hyperband"; version="0.1.2"; sha256="07xygxm8032rbsq9sa7gkms16fzx753q0b6dhxp71pmzm8bsvi06"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3tuning paradox R6]; }; - mlr3learners = derive2 { name="mlr3learners"; version="0.4.5"; sha256="02v4y32yn1m0akkqzhfg65ib21rgy9iz8db4kdcrvi949clkxnfk"; depends=[data_table mlr3 mlr3misc paradox R6]; }; + mlr3filters = derive2 { name="mlr3filters"; version="0.4.2"; sha256="1xlyj7ai230pmcqgyj2zkhqjw819fy88b3ismc4hnq7gwkp0z360"; depends=[backports checkmate data_table mlr3 mlr3misc paradox R6]; }; + mlr3fselect = derive2 { name="mlr3fselect"; version="0.6.0"; sha256="1xzwzxffa4lwdmpqrg05vgj4pfr3rph5zq4123ssjn5b5396shiz"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3pipelines paradox R6]; }; + mlr3hyperband = derive2 { name="mlr3hyperband"; version="0.2.0"; sha256="0jdgmnxq1f9h7zlhdrafs21r80216lwfgd450swm7p4ibnd93fy4"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc mlr3tuning paradox R6]; }; + mlr3learners = derive2 { name="mlr3learners"; version="0.5.0"; sha256="1gkbbn5ah2iv4pv5q2jf4lrqkga744d4y9jlyhyjqf0x75y9wkg2"; depends=[checkmate data_table mlr3 mlr3misc paradox R6]; }; mlr3measures = derive2 { name="mlr3measures"; version="0.3.1"; sha256="18jk4kdj9771r16smz7xhmmiilcdg1qlavln5hrpvkx780zh3hj6"; depends=[checkmate PRROC]; }; - mlr3misc = derive2 { name="mlr3misc"; version="0.9.1"; sha256="0x1jsysw04a0y5arxl0vbv89s6bhffkwarbvgl1z2jjwz8xcd3jj"; depends=[backports checkmate data_table R6]; }; - mlr3oml = derive2 { name="mlr3oml"; version="0.4.3"; sha256="12sz23cnnhrmg00qvdqkwmgpl94841prj31gysxqf0r23779aijl"; depends=[backports checkmate curl data_table jsonlite lgr mlr3 mlr3misc R6 stringi]; }; - mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.3.4"; sha256="1av3sijy2hk9vyxqp2sax1153zy9yz58d3m1gzc12ag5y01v252p"; depends=[backports checkmate data_table digest lgr mlr3 mlr3misc paradox R6 withr]; }; - mlr3proba = derive2 { name="mlr3proba"; version="0.4.0"; sha256="1sgmcbxy8xbsmywsbc8qn6qlr79fr244rfz6hvy6i6ipvb6m7rpf"; depends=[checkmate data_table distr6 mlr3 mlr3misc paradox R6 Rcpp survival]; }; + mlr3misc = derive2 { name="mlr3misc"; version="0.9.4"; sha256="14lcpvxrrl68l3khmy5r266b7yjjlg97pz4xvha0ypx8hlpbqik2"; depends=[backports checkmate data_table digest R6]; }; + mlr3oml = derive2 { name="mlr3oml"; version="0.5.0"; sha256="1w4hjzzmy968mzgyg6ybcpq09n9zkhiwi2ccm41rvwaysl27rgfd"; depends=[backports checkmate curl data_table jsonlite lgr mlr3 mlr3misc R6 stringi]; }; + mlr3pipelines = derive2 { name="mlr3pipelines"; version="0.3.6"; sha256="1imgsfqc5753yva8ws16yjjj44w7hp9l0l5znjjlhdplwcmss5dr"; depends=[backports checkmate data_table digest lgr mlr3 mlr3misc paradox R6 withr]; }; + mlr3proba = derive2 { name="mlr3proba"; version="0.4.1"; sha256="1pq6ihbyz4czgykrdb0bss6h88dpprjc07xdgizrjhx7lpi61vm8"; depends=[checkmate data_table distr6 mlr3 mlr3misc paradox R6 Rcpp survival]; }; mlr3shiny = derive2 { name="mlr3shiny"; version="0.1.1"; sha256="0jn5n6k1dq59g5m6pvpp964pcjv1mjbdbdz7dag7gs26g8c215jb"; depends=[data_table DT e1071 mlr3 mlr3learners mlr3measures plyr purrr ranger readxl shiny shinyalert shinydashboard shinyjs shinythemes shinyWidgets stringr]; }; - mlr3spatiotempcv = derive2 { name="mlr3spatiotempcv"; version="0.3.0"; sha256="03k1973s1b2049jw3ndifl0akc0lbw1vasc31n4sm9cp1f8br2pq"; depends=[checkmate data_table ggplot2 mlr3 mlr3misc paradox R6]; }; - mlr3tuning = derive2 { name="mlr3tuning"; version="0.8.0"; sha256="16rvsf0jf06yvalydbs7zzn2994hvvyfw975ydiyv3wy1qzgr8bv"; depends=[bbotk checkmate data_table lgr mlr3 mlr3misc paradox R6]; }; - mlr3verse = derive2 { name="mlr3verse"; version="0.2.1"; sha256="1z1dx0x72hbi7j4dkgfa0klpldnzynbfn30d5dkra5x2c7ldi0bl"; depends=[bbotk data_table mlr3 mlr3cluster mlr3data mlr3filters mlr3fselect mlr3learners mlr3misc mlr3pipelines mlr3proba mlr3tuning mlr3viz paradox]; }; - mlr3viz = derive2 { name="mlr3viz"; version="0.5.3"; sha256="08d3isdsa2zpjwm1ifnnf5c7zl55iri75r1a5k356aaqabzxmnm6"; depends=[checkmate data_table ggplot2 mlr3misc]; }; + mlr3spatiotempcv = derive2 { name="mlr3spatiotempcv"; version="1.0.0"; sha256="0y04w96xk3m786aamqv9p91gqqyi19dc0shgkwlba32lkd5rqj0w"; depends=[checkmate data_table ggplot2 mlr3 mlr3misc paradox R6]; }; + mlr3tuning = derive2 { name="mlr3tuning"; version="0.9.0"; sha256="0i428kdbak81j1wlwmdf9y40hqi63azhyny802ms2z04wl8lwnvs"; depends=[bbotk checkmate data_table digest lgr mlr3 mlr3misc paradox R6]; }; + mlr3tuningspaces = derive2 { name="mlr3tuningspaces"; version="0.0.1"; sha256="1fr536xy23rglmy4rlk3fb7d29hb5s3vkyx530s7d8i1gwxad9xv"; depends=[checkmate data_table mlr3 mlr3misc mlr3tuning paradox R6]; }; + mlr3verse = derive2 { name="mlr3verse"; version="0.2.2"; sha256="1rgvhxjqxdrdhbslfxcli4mlafgvswc164yzv7rms60asvq1sndw"; depends=[bbotk data_table mlr3 mlr3cluster mlr3data mlr3filters mlr3fselect mlr3learners mlr3misc mlr3pipelines mlr3proba mlr3tuning mlr3viz paradox]; }; + mlr3viz = derive2 { name="mlr3viz"; version="0.5.6"; sha256="1jafba74gv3v0lyqc9m274f4ds6ciw3had8x5awynby69kmqyjwl"; depends=[checkmate data_table ggplot2 mlr3misc]; }; mlrCPO = derive2 { name="mlrCPO"; version="0.3.7-2"; sha256="01n36nh9brb5kkgmxblmcz86gzrrjgg1bi0xmkyyx1qp57qx33p6"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; mlrMBO = derive2 { name="mlrMBO"; version="1.1.5"; sha256="1f2ryd0mrlnnwxgwiria2sxqkb09kskfqjzsh32cbxh6ml4d3fbs"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlrintermbo = derive2 { name="mlrintermbo"; version="0.5.0"; sha256="1nyaqf6vkckdh7jb27iwv5dnvrh4bp0kkc5jzbqkyi8af11phg1l"; depends=[backports bbotk callr checkmate data_table lhs mlr3misc mlr3tuning paradox R6]; }; mlsbm = derive2 { name="mlsbm"; version="0.99.2"; sha256="1p6fflhjbbyzx51hb77aak1kdabjrmzd7b47vdcanhb0vd263aby"; depends=[Rcpp RcppArmadillo]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.2"; sha256="1icsssgi5xf420ajagr9nw0wgbxpfm7dsd5b7s77vyh5hsfzm1z3"; depends=[]; }; - mlt = derive2 { name="mlt"; version="1.3-0"; sha256="00gmhhvjrciyla923a9ml7azw4figgc8dpjpbs698a6w7mr2a38l"; depends=[alabama basefun BB coneproj Matrix nloptr numDeriv sandwich survival variables]; }; + mlt = derive2 { name="mlt"; version="1.3-2"; sha256="13b4zkwwwvvqrsixamafv7fcfzvika4pz11rgxfckaasav1fycjr"; depends=[alabama basefun BB coneproj Matrix nloptr numDeriv sandwich survival variables]; }; mlt_docreg = derive2 { name="mlt.docreg"; version="1.1-0"; sha256="0ad2m0hik6lrbr9jyqqng8rzh4xvpg46l7f3kq2qyx7dbllwhnd7"; depends=[eha flexsurv lattice mlt multcomp np numDeriv survival truncreg]; }; mltest = derive2 { name="mltest"; version="1.0.1"; sha256="14gyssfph088v936mpywmd4y8z9vdv0zk8638vlg23j8cf5j4al2"; depends=[]; }; mltools = derive2 { name="mltools"; version="0.3.5"; sha256="045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh"; depends=[data_table Matrix]; }; @@ -11835,16 +12321,14 @@ in with self; { mnlogit = derive2 { name="mnlogit"; version="1.2.6"; sha256="0dfwpkl8g7ap5xr48smiv8vdbamd2r1liy9nwpsn0kcsr9cj65n9"; depends=[Formula lmtest mlogit]; }; mnonr = derive2 { name="mnonr"; version="1.0.0"; sha256="143qkn3bx37a6r7kgmspqh55l2r8k9f93jgxr6qpg51w411k5ilb"; depends=[]; }; mnormt = derive2 { name="mnormt"; version="2.0.2"; sha256="0d7ka4l4fl1wi77r2r81dc91n6cbj2xrb3lsizz5y0ziscva0sjw"; depends=[tmvnsim]; }; - mnreadR = derive2 { name="mnreadR"; version="2.1.5"; sha256="1lbgaszhfyzs66yhlwmj6zqmxjqqq05lcghz5r2fqnbg2waq0ys0"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; + mnreadR = derive2 { name="mnreadR"; version="2.1.6"; sha256="0h0l05l8cgrdrk8sk60p2284kp2xz35cygzyhlk0h2x29zhw7bb7"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; mnt = derive2 { name="mnt"; version="1.3"; sha256="1wf2mq4zdhznv589j7snw0gpnfrlvq6lhfihi2n20qlwm3lb9naa"; depends=[MASS pracma]; }; - mob = derive2 { name="mob"; version="0.4.1"; sha256="06sfsxbj4l2g7ycr9ifjbvh84dhnbqy9jpsq57i7qjbmcl7kd34y"; depends=[gbm Rborist]; }; - mobForest = derive2 { name="mobForest"; version="1.3.1"; sha256="1g5yfs70abl7pacprijlwdq3l72aqkbqs09z1pmw64wv4wa1vm25"; depends=[modeltools party sandwich strucchange zoo]; }; + mob = derive2 { name="mob"; version="0.4.2"; sha256="1mv0bsik3bdkmnggy2fv0482fqv2yck1ycw49wd45p2dyfzzwcsd"; depends=[gbm Rborist]; }; mobilityIndexR = derive2 { name="mobilityIndexR"; version="0.2.1"; sha256="0bs2wvbjcrfh82b483vz4lr16y2vaajz2fb1p5bw05qb78jqj9bd"; depends=[]; }; mobirep = derive2 { name="mobirep"; version="0.2.3"; sha256="06f7vn3ndkadwp60qvvh3yikdx97r6fkqldn67l1506vdr60pxfm"; depends=[copBasic copula ggplot2 ks lattice SpatialExtremes texmex viridis zoo]; }; mobr = derive2 { name="mobr"; version="2.0.2"; sha256="0dvsarxkjcjn3f40qkx5pdjpvq7hr6l5nvdz6adxlr1sdbadfcws"; depends=[dplyr egg geosphere ggplot2 pbapply plotrix purrr rlang scales tibble tidyr vctrs]; }; mobsim = derive2 { name="mobsim"; version="0.2.0"; sha256="0an8j5kj0cs1bjz9kwzwc54hm0zaiz5rsaw78ihldw0mx5n175gn"; depends=[Rcpp sads vegan]; }; moc = derive2 { name="moc"; version="2.0"; sha256="0fgp8dg9qf7aw1qawmszlxs4bcccqmd87y4kkzdqggm807c2k5gh"; depends=[]; }; - moc_gapbk = derive2 { name="moc.gapbk"; version="0.1.0"; sha256="0gg64srdb17dx712hilnlrii9i5vi9vjrk17acaynaz307akdw08"; depends=[amap doMPI doParallel doSNOW fields foreach matrixStats mco miscTools nsga2R plyr reshape2 Rmisc]; }; mockery = derive2 { name="mockery"; version="0.4.2"; sha256="16zayzi2qdmiy513hvlci9f4p8jwry24006yfzrgmrvf6sf293lq"; depends=[testthat]; }; mockr = derive2 { name="mockr"; version="0.1"; sha256="0340v6189ivlzzriwk7yhf3v2k651x05fd1xrqfxxjgwhysaqj6z"; depends=[lazyeval]; }; mockthat = derive2 { name="mockthat"; version="0.2.6"; sha256="12srlafk3ykzhrw65s1qzw3l566j285hi28rzrcpbgyr12720raa"; depends=[]; }; @@ -11861,32 +12345,34 @@ in with self; { modehunt = derive2 { name="modehunt"; version="1.0.7"; sha256="0qz9kmf1qfs2dr7kzm9l7ac0h5rvi3b9j9896p991sk4bcalsl0b"; depends=[]; }; model4you = derive2 { name="model4you"; version="0.9-7"; sha256="0pni9v3nradvy8sp2m07903vc7z610xrh426lf19dxss12kgrfi8"; depends=[Formula ggplot2 gridExtra partykit sandwich survival]; }; modelDown = derive2 { name="modelDown"; version="1.1"; sha256="1l0aggkh0ykpqrp59bdz1cyl1ai397cw4hya80b7fm7s49imwczg"; depends=[archivist auditor breakDown DALEX devtools drifter DT ggplot2 kableExtra psych svglite whisker]; }; - modelObj = derive2 { name="modelObj"; version="4.0"; sha256="1py2y80x37mmnl2y0pxdbhqkjrln6x210hg0g224d34lxk71m172"; depends=[]; }; - modelStudio = derive2 { name="modelStudio"; version="2.1.2"; sha256="1blyyb8xag64v8sr73lbffc5jcn2vq39war3zakirag4j8bh73sv"; depends=[DALEX digest iBreakDown ingredients jsonlite progress r2d3]; }; - modelbased = derive2 { name="modelbased"; version="0.6.0"; sha256="02l6q5j5q5p2fg6km8kcv2y5ab3sh2indbbkz9fp05x0v72n7qmj"; depends=[bayestestR emmeans insight parameters]; }; + modelObj = derive2 { name="modelObj"; version="4.1"; sha256="0afws8vd7qj9m2ikj0ph1vp2rgr3v979hp3qjapgmln1cwglchlw"; depends=[]; }; + modelROC = derive2 { name="modelROC"; version="1.0"; sha256="0iyx7c98ym7dy6pfssj7474h9wjpzjwy0fyc5bnqyi1lmjgd508k"; depends=[do ggplot2 ROCit survivalROC tmcn]; }; + modelStudio = derive2 { name="modelStudio"; version="3.0.0"; sha256="0gs9r5502ks44ks1phfj8lq13rh6pl8rc2d2fcxadfpvm7ym7x5r"; depends=[DALEX digest iBreakDown ingredients jsonlite progress r2d3]; }; + modelbased = derive2 { name="modelbased"; version="0.7.0"; sha256="0jq9zb2avs7qwins32rpdymndwh4kpsdjy5gbjwacjh4ksxks3fz"; depends=[bayestestR effectsize insight parameters performance]; }; modelc = derive2 { name="modelc"; version="1.0.0.0"; sha256="0xz1zgv5yyvq0yfnhm1kvb4wvlyn4ccd0lkwji55vq8hndvjvk98"; depends=[]; }; - modeldata = derive2 { name="modeldata"; version="0.1.0"; sha256="0lbvmicvhw560jn9qk5dywrl6mgj1rf7zh7p86lf97c6bmz0zp2r"; depends=[]; }; + modeldata = derive2 { name="modeldata"; version="0.1.1"; sha256="0jgrwf9k8p9j3ywg3yv2wzwsx3snlwm3dd9vfqwhlr7j63jg3cm4"; depends=[]; }; modeldb = derive2 { name="modeldb"; version="0.2.2"; sha256="14s8xh05qxv414xcnww1b3s0jqwnjb3l1dqf7q1qbw33ilwcmsfb"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; modelgrid = derive2 { name="modelgrid"; version="1.1.1.0"; sha256="1z6g0akczry7vldkk6anfq572zbsfzbd6qnyllgjpbxhy3rrrq0r"; depends=[caret dplyr ggplot2 lattice magrittr purrr]; }; + modelimpact = derive2 { name="modelimpact"; version="1.0.0"; sha256="16sy7r6bw5nzx77rd27ihgvp7bs39xchgid94ssklj6syc3kn2vq"; depends=[dplyr magrittr]; }; modelplotr = derive2 { name="modelplotr"; version="1.1.0"; sha256="0i1ssfcyl97zaxc9khdngrmsq9ydrmgv2nd7c6kc6i9z93jbkk4k"; depends=[dplyr ggfittext ggplot2 gridExtra magrittr RColorBrewer rlang scales]; }; modelr = derive2 { name="modelr"; version="0.1.8"; sha256="1i31nff7bqibk6r4hhd4j1vzwbyaf8493v0bjaagn36njmysfnw2"; depends=[broom magrittr purrr rlang tibble tidyr tidyselect vctrs]; }; - modelsummary = derive2 { name="modelsummary"; version="0.7.0"; sha256="08rcwc9g5v1av6368ll7yd91acfh96fs0nnyk8hj0xj02440gcv4"; depends=[broom checkmate generics glue insight kableExtra parameters performance tables tidyr tidyselect]; }; + modelsummary = derive2 { name="modelsummary"; version="0.9.1"; sha256="10rjrgnwf0rm2swv7641d5aj122yp9g31g1gppiw07rz3gvgmlrr"; depends=[broom checkmate generics glue insight kableExtra parameters performance rlang tables]; }; modeltests = derive2 { name="modeltests"; version="0.1.4"; sha256="0ii5sh8yz5yvf0gq41ia55dvbg8x9042x82j52ck6haxa0w8zpfy"; depends=[dplyr generics purrr testthat tibble]; }; - modeltime = derive2 { name="modeltime"; version="0.5.1"; sha256="10a80ai1ymsaxs1kfd33rrgmpgi61qdlrzl9vsq4mpb0bd154fiy"; depends=[cli dials dplyr forcats forecast ggplot2 glue gt hardhat janitor magrittr parsnip plotly progressr prophet purrr reactable rlang scales StanHeaders stringr tibble tidyr timetk workflows xgboost yardstick]; }; - modeltime_ensemble = derive2 { name="modeltime.ensemble"; version="0.4.0"; sha256="05ddbalx3mrl7gi3jcvzr47nwksb1ia79z5l9kgai8gcxj6im3y1"; depends=[cli crayon dials dplyr generics glmnet glue magrittr modeltime modeltime_resample parsnip progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; + modeltime = derive2 { name="modeltime"; version="1.0.0"; sha256="17agyj6drqfb17as0l3207kim22lrvmbgcdm1pvv2bvxm87wixwm"; depends=[cli dials doParallel dplyr forcats foreach forecast ggplot2 glue gt hardhat janitor magrittr parsnip plotly prophet purrr reactable rlang scales StanHeaders stringr tibble tidyr timetk workflows xgboost yardstick]; }; + modeltime_ensemble = derive2 { name="modeltime.ensemble"; version="0.4.2"; sha256="0d2xl444wn5svi1gaid2mpkmzrb6qcdbzld5fjcm3n1lnzay49lv"; depends=[cli dplyr generics glue magrittr modeltime modeltime_resample parsnip purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; modeltime_gluonts = derive2 { name="modeltime.gluonts"; version="0.1.0"; sha256="1nivqpdyr2s6q70bixna0a18gbhrf1r20vm0gj8b51idjignwpp7"; depends=[dplyr forcats fs glue magrittr modeltime parsnip purrr reticulate rlang stringr tibble tidyr timetk]; }; modeltime_h2o = derive2 { name="modeltime.h2o"; version="0.1.1"; sha256="0rg7ha1zy0a1fbwrljsglfnfgkl747hjga8xajlzyrczhrmh4vnk"; depends=[dplyr fs glue h2o magrittr modeltime parsnip purrr rlang stringr tibble tidyr timetk]; }; modeltime_resample = derive2 { name="modeltime.resample"; version="0.2.0"; sha256="1f58ydh8ilvbg92qv1q1bn0bd62cav5apjlzy38sjgwvb54kvi3i"; depends=[cli crayon dials dplyr forcats ggplot2 glue magrittr modeltime parsnip plotly progressr purrr recipes rlang rsample stringr tibble tictoc tidyr timetk tune workflows yardstick]; }; modeltools = derive2 { name="modeltools"; version="0.2-23"; sha256="1vqh69256h344sbj5affm0kmc77dakrxp6442xfdnfd0y5d8sgkb"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; modernVA = derive2 { name="modernVA"; version="0.1.1"; sha256="1kjfgr7fcf0w27gx1wwapxcw5wisfv75mq9qc5hjnaivmsnkwsv3"; depends=[]; }; - moderndive = derive2 { name="moderndive"; version="0.5.1"; sha256="0507lx58jk43vn9cqk0jzk0h7n6akwpws49yy5rs67df0qpsszli"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; + moderndive = derive2 { name="moderndive"; version="0.5.2"; sha256="0s9ja6akkzq71hy62zgcxasazzsf7yrahyrrzy1lh0rkxis53xkr"; depends=[broom dplyr formula_tools ggplot2 glue infer janitor knitr magrittr rlang stringr tibble]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; modesto = derive2 { name="modesto"; version="0.1.3"; sha256="1121zlbsp71rca7bqrhl2yshrz99iw48aldg506vcfcmym8hx7dy"; depends=[markovchain Rcpp]; }; modgetxl = derive2 { name="modgetxl"; version="0.4"; sha256="0j9fmhy3wra9qr8753a495ligfz5fwgydv3ixlfzx3sgbq882hic"; depends=[DT readxl shiny shinydashboard]; }; modi = derive2 { name="modi"; version="0.1.0"; sha256="0v78vzb22v2h2qlfhsyi0d2j3c2gj3wgv67p6gv74269kiaglf92"; depends=[MASS norm]; }; - modifiedmk = derive2 { name="modifiedmk"; version="1.5.0"; sha256="171l3ls7icaanqf6jb64jabwq0mis2g1fswr0jfkpkrw5iw1c66q"; depends=[boot]; }; + modifiedmk = derive2 { name="modifiedmk"; version="1.6"; sha256="1m1c36vyzyl0v0gfy9fqlprvs3pvanj20dn56kxpniykdylscn3w"; depends=[boot]; }; modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; }; modmarg = derive2 { name="modmarg"; version="0.9.6"; sha256="1l57sqhv1xm5g3z9rdlhkkq6gpbn7a3z8bk4dhvzm44xcfv8hi3i"; depends=[]; }; modopt_matlab = derive2 { name="modopt.matlab"; version="1.0-2"; sha256="0g5mswalv4y7p1k3n8a6qf7wb072m4bjq2ml2j83dz2j2bmvygsd"; depends=[ROI ROI_plugin_glpk ROI_plugin_quadprog]; }; @@ -11900,12 +12386,13 @@ in with self; { mokken = derive2 { name="mokken"; version="3.0.6"; sha256="127wjfvwc1dbb4bpaxa3arqsc87nrhzwsr0ldrc57s4hf3ibmcbg"; depends=[poLCA Rcpp]; }; moko = derive2 { name="moko"; version="1.0.3"; sha256="1igrz0k9gfs4lmwh20bvmx8176d22g8gha7iv36mrpqgcynfdzh0"; depends=[DiceKriging emoa GenSA GPareto mco]; }; molaR = derive2 { name="molaR"; version="4.5"; sha256="1mfb05cfg0jh60yxnmwhja6m38185r58kbz2ak0ikgaqd9lls07s"; depends=[alphahull rgl Rvcg]; }; - molic = derive2 { name="molic"; version="2.0.1"; sha256="0ling6rbccp0r3y3g8mlxd39hx8qgb3z1y82rjzsaamqwbzx7biz"; depends=[doParallel ess foreach ggplot2 ggridges Rcpp]; }; - mombf = derive2 { name="mombf"; version="3.0.1"; sha256="1a6rhjr8r0h80dp90q0vdmaszvl2wr6yid8yx9af4sxymh33lspr"; depends=[mclust mgcv mvtnorm ncvreg Rcpp RcppArmadillo survival]; }; + molic = derive2 { name="molic"; version="2.0.3"; sha256="1qgb63wl5726mypv0f07wcf3aznl93vh045ghx66hiqj3kzfir2b"; depends=[doParallel ess foreach ggplot2 ggridges Rcpp]; }; + molnet = derive2 { name="molnet"; version="0.1.0"; sha256="1ha1jyh3mmbv2zgr2zrrjmslwd1gyy04hvqjk4d3ap2kna35wlgk"; depends=[dplyr igraph magrittr readr Rfast rlang stringr tibble tidyr WGCNA]; }; + mombf = derive2 { name="mombf"; version="3.0.4"; sha256="1zr4g7xhqr3ric504shiaz44hqpgg7fkqwhirxbrciyqnrhxha2c"; depends=[mclust mgcv mvtnorm ncvreg Rcpp RcppArmadillo survival]; }; momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; momentfit = derive2 { name="momentfit"; version="0.2"; sha256="1xh3w3bwr2k4a79vma5cmz0l995nwbih0j7sgv3bjqdv4fn463d1"; depends=[sandwich]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; - momentuHMM = derive2 { name="momentuHMM"; version="1.5.2"; sha256="1da7bva6zfr8c5bq00mrd41igza8kk4cksx84dap2lhkw6i7ipxy"; depends=[Brobdingnag car CircStats crawl data_tree doParallel doRNG extraDistr foreach geosphere MASS mitools mvtnorm nleqslv numDeriv prodlim qdapRegex Rcpp RcppArmadillo rlang sp survival]; }; + momentuHMM = derive2 { name="momentuHMM"; version="1.5.4"; sha256="1hcgrc7nhccn5bw7mgxahhbc6i3dc607g1109b5ahv94yq2ghj09"; depends=[Brobdingnag CircStats crawl doParallel doRNG foreach MASS mvtnorm numDeriv Rcpp RcppArmadillo rlang sp]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; monaco = derive2 { name="monaco"; version="0.2.1"; sha256="1wwfwxv8064icdi6fhyrp3mrpv37x0cnnwdb5k1b88jfzb7j1hb6"; depends=[htmltools htmlwidgets rstudioapi shiny]; }; mondate = derive2 { name="mondate"; version="0.10.02"; sha256="18nsqldj1vvv882nh2dyilqvz1jbhqkz3q69cpjq1xfcj0z88qxz"; depends=[]; }; @@ -11914,6 +12401,8 @@ in with self; { monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; monoClust = derive2 { name="monoClust"; version="1.2.1"; sha256="18zb4wfb09rpzzr9bc0nr71994nhgsk74s512dxlss50isvfqjqd"; depends=[cluster doParallel dplyr foreach ggplot2 permute purrr rlang stringr tibble tidyr]; }; + monobin = derive2 { name="monobin"; version="0.1.1"; sha256="139mlfiaf64g2arsh3b4zivppxgrk38i7iyw1qli1zc1rdqhfrf4"; depends=[dplyr Hmisc]; }; + monobinShiny = derive2 { name="monobinShiny"; version="0.0.9"; sha256="0cd54zqj4y8ii2m5jhn5fz77zylfds030rhf709wlmgj96s0i750"; depends=[dplyr DT monobin shiny shinydashboard shinyjs]; }; monographaR = derive2 { name="monographaR"; version="1.2.1"; sha256="09fkcw13h7dx7j5vyp48fk6yzv9n64568zf2zvmm2c008jw3gkbm"; depends=[circular maptools png raster rmarkdown sp]; }; monomvn = derive2 { name="monomvn"; version="1.9-13"; sha256="1hm5qf28bh0q7f4zcjqx1qxw3l8hzkx349c1y3nwyfg7436vff6a"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; @@ -11924,12 +12413,14 @@ in with self; { moonBook = derive2 { name="moonBook"; version="0.2.4"; sha256="0z78pzc8sr2g19xjdd9cmai4iqyifmh79gj8x40ddww6a27dalry"; depends=[magrittr nortest sjmisc stringr survival ztable]; }; mopac = derive2 { name="mopac"; version="0.1.0"; sha256="07ljy6rwicyrv20l7zyxq2lb7qqfpl5mpv834m2n5c4air7sy23m"; depends=[]; }; mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; }; - moreparty = derive2 { name="moreparty"; version="0.2.0"; sha256="0wds0223aqpflzmid9mdzszh1yrylqq68cqw5fj4yz0c1vwvfixh"; depends=[foreach ggplot2 iml MASS measures party partykit pdp plyr rlang varImp vip]; }; + moreparty = derive2 { name="moreparty"; version="0.2.1"; sha256="0p30skq5x3rz3xbp2izq44v5c0byw7cw2han6bardah7xniz3w2d"; depends=[foreach ggplot2 iml MASS measures party partykit pdp plyr rlang varImp vip]; }; morgenstemning = derive2 { name="morgenstemning"; version="1.0"; sha256="17y90cf8ajmkfwla0hm4jgkbkd1mxnym63ph2468sfxkhn0r3v88"; depends=[]; }; + morphemepiece = derive2 { name="morphemepiece"; version="1.0.1"; sha256="1cja9lqzf90ixgr8b2j3mpgyxhynkcxmm8wl8kniifd2vp7ganbd"; depends=[dlr magrittr morphemepiece_data piecemaker purrr rlang stringr]; }; + morphemepiece_data = derive2 { name="morphemepiece.data"; version="1.0.0"; sha256="1dnjav7s23ang120csjy2qkjzhplvgcnmfii7xk8viklsv27cgcl"; depends=[]; }; morpheus = derive2 { name="morpheus"; version="1.0-1"; sha256="1zfx24ndlky0b6vg6an9vcjw955ms749dwb51x9gsj2m8vgrbpnn"; depends=[jointDiag MASS pracma]; }; morphomap = derive2 { name="morphomap"; version="1.3"; sha256="12jqrabx8vgkrfwcv4845jbf79ibg5iqzzzr4x4vybb4b2p2wd2i"; depends=[Arothron colorRamps DescTools geometry lattice mgcv Morpho oce raster rgdal rgl Rvcg sp]; }; morse = derive2 { name="morse"; version="3.3.1"; sha256="0p7a5p31i0lw0y84nk3ar2211rvlj5y96qq2lmmrrab17pcikg24"; depends=[coda deSolve dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; - mortAAR = derive2 { name="mortAAR"; version="1.1.0"; sha256="0xdiipxyfninknagn19xm1p4aqmwrz9c5zkxi49bbgrvv0742cfq"; depends=[crayon magrittr Rdpack reshape2 tibble]; }; + mortAAR = derive2 { name="mortAAR"; version="1.1.1"; sha256="0as88rl4v2shrfjqpvjajnb2wj00n3fj8mzj4g0ssywmccxji5ag"; depends=[magrittr Rdpack reshape2 tibble]; }; mortyr = derive2 { name="mortyr"; version="0.0.2"; sha256="0flihmkzw8dypp2ijq22cd3rka6h8cd1qdyr4zrs9cv5335nddmk"; depends=[httr jsonlite tibble]; }; mosaic = derive2 { name="mosaic"; version="1.8.3"; sha256="1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel ggridges ggstance glue gridExtra lattice latticeExtra leaflet MASS Matrix mosaicCore mosaicData readr rlang tidyr]; }; mosaic_find = derive2 { name="mosaic.find"; version="0.1.2"; sha256="1fzgksh8sp701qjfrvjl2bg967qjkjpilxsfkrazhw71cgmzjgjl"; depends=[minpack_lm]; }; @@ -11939,22 +12430,22 @@ in with self; { mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; mosmafs = derive2 { name="mosmafs"; version="0.1.2"; sha256="04syr5qr91hyv1m5hfrjsriq0qgidaln06m7f3jgc1qyrni930rw"; depends=[BBmisc checkmate ecr MASS mlr mlrCPO parallelMap ParamHelpers smoof]; }; mosqcontrol = derive2 { name="mosqcontrol"; version="0.1.0"; sha256="199rkfisagr4kfx358f8yrbls00fng0kq8siyrbfwwf8qrba9fla"; depends=[assertthat magrittr NlcOptim nloptr pracma sfsmisc]; }; - mosum = derive2 { name="mosum"; version="1.2.5"; sha256="1lhd6m5qs7119xbsbk5zkf74mdh2c5zsk6gvchkjn6kdj5d5lyqp"; depends=[plot3D RColorBrewer Rcpp]; }; - motif = derive2 { name="motif"; version="0.4.1"; sha256="17x9azn1q768p4fa8rlplf8g93zhmw8kc1l6ri18mix84q8kjym0"; depends=[comat philentropy Rcpp RcppArmadillo sf stars tibble]; }; + mosum = derive2 { name="mosum"; version="1.2.6"; sha256="1xbh06sxvqgwqmid2x1lba43b20ma0gpw8mqgjnii51g7masb9kb"; depends=[plot3D RColorBrewer Rcpp]; }; + motif = derive2 { name="motif"; version="0.5.0"; sha256="1lvybnahxg5xr1rqih1nczqgywcywnjwzdix8asgyl0ayh9fsv21"; depends=[comat philentropy Rcpp RcppArmadillo sf stars tibble]; }; motifcluster = derive2 { name="motifcluster"; version="0.1.1"; sha256="1a123djc476hf528h68f1l1sh47ljxh23hmp8j22fypiaci1a3av"; depends=[igraph LICORS Matrix RSpectra]; }; motifr = derive2 { name="motifr"; version="1.0.0"; sha256="01synariq39mzhx12jbcpwn982piakakl97sgs33xa8xrbwzcxgm"; depends=[dplyr ggplot2 ggraph igraph intergraph network purrr RColorBrewer reshape2 reticulate rlang scales tibble tidygraph]; }; motmot = derive2 { name="motmot"; version="2.1.3"; sha256="09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq"; depends=[ape caper coda ks mvtnorm Rcpp]; }; motoRneuron = derive2 { name="motoRneuron"; version="1.0.0"; sha256="1hdsf4c1v5hfaqpi5y1v60zqq5fdmlqdvzpsq77diclp9vzdshja"; depends=[dygraphs ggplot2]; }; - moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; + moult = derive2 { name="moult"; version="2.2.0"; sha256="15r5s5ghqip28g12bwcn407lhgfv6408gndw4nvm3nhi8z0hwvrd"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.3"; sha256="1mgvcv58pb3ximrf7gq1ii53gmjrn1qajayjlx8qqzsvjkn3myin"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; - mousetrap = derive2 { name="mousetrap"; version="3.1.5"; sha256="0q89k4hb6lv65b71qivvahpblpcgnd5jmmq9z5m8jvp1ksp49vqz"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp rlang scales tidyr]; }; + mousetrap = derive2 { name="mousetrap"; version="3.2.0"; sha256="0m7mmvb60pq0x87mzwj3gfwik43vsqi0g92gqwnzvchvj1x34jmn"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp rlang scales tidyr]; }; movMF = derive2 { name="movMF"; version="0.2-5"; sha256="1k790g1h17vv4ails4jhdnqiwj3b2zpas13x8wzkabwf4k0n1g91"; depends=[clue skmeans slam]; }; move = derive2 { name="move"; version="4.0.6"; sha256="0fjq9msscxpkyzvd7vnz9g8r8f8sv0clnps2bkk9jhk8jscwvjhp"; depends=[geosphere httr memoise raster Rcpp rgdal sp xml2]; }; moveHMM = derive2 { name="moveHMM"; version="1.7"; sha256="031msh427hgjyr37imalr7smd79yqscw9xq5rjrixxc2w5qly9jj"; depends=[boot CircStats geosphere ggmap ggplot2 MASS numDeriv Rcpp RcppArmadillo sp]; }; moveVis = derive2 { name="moveVis"; version="0.10.5"; sha256="1lj22yr6v3vg795r72gkbhyabycppxbjsaldqiqgckhkdfh3lziw"; depends=[av cowplot curl ggplot2 gifski lubridate lwgeom magick magrittr move pbapply raster sf slippymath]; }; moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.3"; sha256="14a2iymn4j831xlh42z5qxmhnh7xpp5bxasgpkhnb3v0b5ldyilh"; depends=[move Rcpp]; }; - movecost = derive2 { name="movecost"; version="0.7"; sha256="1w80r14ahkj5daj0pjv8ww8lzhngzxvv3xg839w7fv1q4paik6in"; depends=[elevatr gdistance raster rgdal rgeos sp]; }; + movecost = derive2 { name="movecost"; version="1.4"; sha256="1fmfzrgk7a5fcqp61a8755fyasn217ixkwmpmjkpjfk77m1wdali"; depends=[chron elevatr gdistance maptools raster rgdal rgeos sp spatstat_geom]; }; mozzie = derive2 { name="mozzie"; version="0.1.0"; sha256="09dwrv4r0hi19gzi1vpif3q4wlbny9h22430g1hhv0wkqs86mhmw"; depends=[]; }; mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; @@ -11963,50 +12454,51 @@ in with self; { mpcmp = derive2 { name="mpcmp"; version="0.3.6"; sha256="1jzrmaxm133zy4wi5pzjlj6gnh89nx4j69dnwm4s4y3i7ixch908"; depends=[dplyr generics ggplot2 ggpubr purrr Rcpp rlang stringr tibble]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; }; - mplot = derive2 { name="mplot"; version="1.0.4"; sha256="1f3llh1599q8259la02nvdigrs4p4j1l4qsp5bxi19my6gff0l10"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps plyr reshape2 scales shiny shinydashboard tidyr]; }; + mplot = derive2 { name="mplot"; version="1.0.6"; sha256="15cmwk4lphxy5p3azy9lwhij76127h9g4g1j1sv59mbqvrqid0sk"; depends=[bestglm doParallel doRNG dplyr foreach ggplot2 glmnet googleVis leaps magrittr plyr reshape2 scales shiny shinydashboard tidyr]; }; mpm = derive2 { name="mpm"; version="1.0-22"; sha256="0wijw8v0wmbfrda5564cmnp788qmlkk21yn5cp5qk8aprm9l1fnk"; depends=[KernSmooth MASS]; }; mpmcorrelogram = derive2 { name="mpmcorrelogram"; version="0.1-4"; sha256="0gv9xswrfvndcjal0csab1w2cnl4rg8pznyxbz84b0qr95jg81ag"; depends=[vegan]; }; mpmi = derive2 { name="mpmi"; version="0.43.1"; sha256="1lz7928vz52hs8dad9rj34hnkv8y0yj4mfiydwkrqvsl8avwc4qk"; depends=[KernSmooth]; }; mpoly = derive2 { name="mpoly"; version="1.1.1"; sha256="10is69ks22ka1cqw3xk0fvy4z3b2drm8lanqwj178qrzj7ipf7i0"; depends=[ggplot2 orthopolynom partitions plyr polynom stringi stringr tidyr]; }; - mppR = derive2 { name="mppR"; version="1.2.1"; sha256="0q4pyfwypicmx8lqkgjkmagh6kyr6iww8xa64fxv0ayf8pcbzrca"; depends=[ggplot2 igraph qtl]; }; + mppR = derive2 { name="mppR"; version="1.3.0"; sha256="12fjb8q3yhhpsdb0wiv6bamw6a4igv2as9vqq6ac1gab454b9fxn"; depends=[ggplot2 igraph qtl]; }; mppa = derive2 { name="mppa"; version="1.0"; sha256="06v6vq2nfh4b407x2gyvcp5wbdrcnk3m8y58akapi66lj8xplcx4"; depends=[]; }; mpspline2 = derive2 { name="mpspline2"; version="0.1.3"; sha256="0yadvnfsj1c9mm28v6501510dhcg77nzcvky32zmhaa21gwszcij"; depends=[]; }; - mpt = derive2 { name="mpt"; version="0.6-2"; sha256="19nkkpxd250xzk0il60psvhcikxfn9yqvfv9d21wilc9n2h79ad2"; depends=[]; }; + mpt = derive2 { name="mpt"; version="0.7-0"; sha256="1nwc3szl5g5cd39z7ydr91bvvg58gb7r5zbjbylp93yx3pr7bsjh"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; }; mrMLM = derive2 { name="mrMLM"; version="4.0.2"; sha256="0v2vmzylaqk836xqpyjy5cccnpsacyy2b334cay3pdlr8qdmrqky"; depends=[coin data_table doParallel foreach lars ncvreg Rcpp RcppEigen sampling sbl]; }; mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="4.0.2"; sha256="0ywxaw164czfgbnqfkh5zw06006clisbc780w2h4z71wfvj56dsi"; depends=[bigmemory coin data_table doParallel foreach lars mrMLM ncvreg Rcpp RcppEigen sampling sbl shiny shinyjs]; }; mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.4.2"; sha256="18pi0dks0qmw0gv76yqm4gvxdqrcvr25j1vb8k4mkp5p35kzkzff"; depends=[multcomp mvtnorm survival survPresmooth]; }; - mrbayes = derive2 { name="mrbayes"; version="0.3.0"; sha256="17q0fr9za7xgb4a5fmbn4ljn9x7zv3kw3va3n6z3h31cak2irvf2"; depends=[BH plyr Rcpp RcppEigen rstan rstantools StanHeaders]; }; - mrbin = derive2 { name="mrbin"; version="1.5.2"; sha256="0qik1lxycc7i0q2yw5d6r6qarddshvzdyjyxfwn1k9hyvjzxd30c"; depends=[]; }; + mrbayes = derive2 { name="mrbayes"; version="0.5.0"; sha256="1aw1gwm6nw0g99z0sj0hr2nxh4g4ckhgly4clj1xbmcx87734nxm"; depends=[BH plyr Rcpp RcppEigen rstan rstantools StanHeaders]; }; + mrbin = derive2 { name="mrbin"; version="1.6.0"; sha256="19xb5assji5zlv93s2iig7nz5df47bmp5jc5iwg24z2sw367qjwl"; depends=[]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.2.1.1"; sha256="0v06sd5sh7ghlr8lgrv6l4glmv7chj3951pw4ssxrly4hz2rh6i0"; depends=[fields maps Rcpp]; }; - mrds = derive2 { name="mrds"; version="2.2.4"; sha256="0c432vi2b82078nzmwkchrazjaf6bjs4hgvndn03s2ja76sxnd1m"; depends=[mgcv numDeriv optimx Rsolnp]; }; + mrds = derive2 { name="mrds"; version="2.2.5"; sha256="1659nzdykl4mgfgyniwnwrn1a0m6wiz7c02ygwpm90bnz8f4g5y2"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; mregions = derive2 { name="mregions"; version="0.1.6"; sha256="0ix77hqcllhcpldchlnvciiflm6ysylynnnqvczpf8vx7gwa3lrk"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; + mrf = derive2 { name="mrf"; version="0.1.5"; sha256="169sw6wvxdy6j9b1vcng6dsxvq1h23pyzp0dnry3yp06yjz76wq6"; depends=[DEoptim forecast limSolve monmlp nnfor]; }; mrf2d = derive2 { name="mrf2d"; version="0.5"; sha256="0vp5rcmrsyfsnh5rmv130081yzrxf7g0pdvydrlvfabsx9his6pl"; depends=[dplyr ggplot2 Rcpp RcppArmadillo Rdpack tidyr]; }; mrfDepth = derive2 { name="mrfDepth"; version="1.0.13"; sha256="177331j30n707mcl1ghxjc53xjs9qsal15kccc71b0rabkjdq2wv"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; mrfse = derive2 { name="mrfse"; version="0.2"; sha256="1dx21m54jsprlngj20q1bgvbw1bbm0sm8i01xanj68bx796ng14j"; depends=[]; }; mrgsim_parallel = derive2 { name="mrgsim.parallel"; version="0.1.1"; sha256="0xsq7538z8rw4b5q3bcrspgfjw965yr5v7f8k3za04ksx775nfy2"; depends=[dplyr future_apply mrgsolve]; }; mrgsim_sa = derive2 { name="mrgsim.sa"; version="0.1.0"; sha256="199m6ygwnw6fbld5fqsw1j5jz9x6l1ayrpsc0r51q4fr7nmmpfj2"; depends=[assertthat dplyr ggplot2 mrgsolve patchwork purrr rlang tibble tidyr tidyselect withr]; }; - mrgsolve = derive2 { name="mrgsolve"; version="0.11.0"; sha256="0pkbxal568249mh67rimrxrp2932zy7xznqablv1b0x2m2k95nw2"; depends=[BH dplyr glue lifecycle magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; + mrgsolve = derive2 { name="mrgsolve"; version="0.11.1"; sha256="1hgrbj92m610a4kblvd1dbxgfc2cckfpjxp3xir5764gii6dvcd7"; depends=[BH dplyr glue lifecycle magrittr Rcpp RcppArmadillo rlang tibble tidyselect]; }; mri = derive2 { name="mri"; version="1.0.1"; sha256="1dssq556kid6c3djp0s6v853cranv2wjs2c9521l5ykg5g33hfmv"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-2"; sha256="07b1b2k1ka43ikj2mhwnazw3ig7w10bf759fimxpksvk5k6wanx2"; depends=[lattice misc3d oro_nifti]; }; mro = derive2 { name="mro"; version="0.1.1"; sha256="00gc2hd8q5hb2xrswclcqqw1gxl83zmpma6bhsggg3kppsw1dpjv"; depends=[MASS matrixcalc]; }; mrregression = derive2 { name="mrregression"; version="1.0.0"; sha256="1yy2sjs0b67bqyggzypp2g7x4fdmi86jx2nbcp2n7hcf9cdacysi"; depends=[data_table Rcpp]; }; ms_sev = derive2 { name="ms.sev"; version="1.0.4"; sha256="1sr2rgiskgwjhwif70qj6ga8i8kg4bh342hff66b2a54rxrchmw5"; depends=[]; }; msBP = derive2 { name="msBP"; version="1.4"; sha256="17hsnfipb6mgwhbc9rxzx5azc57ravz7zfnbc8r73sn1b270ydpb"; depends=[]; }; - msSPChelpR = derive2 { name="msSPChelpR"; version="0.8.6"; sha256="0254riap3lxp929c7isj2665wvziiy2lskhhyzw50kyd768bvb60"; depends=[data_table dplyr lubridate magrittr progress purrr rlang sjlabelled stringr tidyr tidyselect tidytable]; }; + msSPChelpR = derive2 { name="msSPChelpR"; version="0.8.7"; sha256="1rmzjyk7qa91rwlwa2jcr54hi5dihlgjk080iqb36xsl6rgkrb1f"; depends=[data_table dplyr lubridate magrittr progress purrr rlang sjlabelled stringr tidyr tidyselect tidytable]; }; msSurv = derive2 { name="msSurv"; version="1.2-2"; sha256="02qm3mq17d2yj5mbz6gapd3zfi1wmiad5hpyimcb39impk43n2hf"; depends=[class graph lattice]; }; msaFACE = derive2 { name="msaFACE"; version="0.1.0"; sha256="1lh8crz507nlddm946lmn73xbnsh4cs0kg238ysnsvxs726c83fs"; depends=[]; }; - msaR = derive2 { name="msaR"; version="0.5.0"; sha256="0f8kjpp6ma9iv2p904fan67fmf4v1zzc7a5r3krlsffyqqbwp9w4"; depends=[ape htmlwidgets]; }; + msaR = derive2 { name="msaR"; version="0.6.0"; sha256="12d6vql85d1mzcy889z7pbmldcwwmzijimcr9frm12ahmka81byx"; depends=[ape htmlwidgets]; }; msae = derive2 { name="msae"; version="0.1.3"; sha256="11iwy0g1hiycya9rnri0m2np3cr50acr58h0mgnb3ikwyqdb9li9"; depends=[magic]; }; msaeDB = derive2 { name="msaeDB"; version="0.2.1"; sha256="0ccvg41d28qjbknhsamw95nq8fdibmz03pwblddkqywfl5yarii3"; depends=[magic MASS]; }; - msaeRB = derive2 { name="msaeRB"; version="0.1.5"; sha256="0ssbnd9ix61dzkbf4lmjsi2jlzjw7lcvy9rx2s4ppy31x3fl9w2d"; depends=[abind magic MASS Matrix]; }; + msaeRB = derive2 { name="msaeRB"; version="0.2.1"; sha256="0mpyirvaflmp6gc35kbz1rw5ydxxdgfji3j9c8hjrjqz6759birb"; depends=[abind magic MASS Matrix]; }; msaenet = derive2 { name="msaenet"; version="3.1"; sha256="067p97z54dwhxy0w4ihi8dddcbvglh8ssynbh29fl9jyxfwjr1ms"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; msce = derive2 { name="msce"; version="1.0.1"; sha256="1x9ivc2bjp07pdn15p3qds00m1m00amcg2dfcdjsgbkx9x1kkfab"; depends=[Rcpp RcppParallel]; }; - mschart = derive2 { name="mschart"; version="0.3.0"; sha256="1mryxq21gl44kmn5qiyym43bv47fc6sjdm5pqkd80jfb6zpjym2b"; depends=[cellranger data_table htmltools officer writexl xml2]; }; + mschart = derive2 { name="mschart"; version="0.3.1"; sha256="1ryl221hl0ydpmfanhm3hk063kxvvzqfgwwz3ra37dgy1yamn1kq"; depends=[cellranger data_table htmltools officer writexl xml2]; }; mscp = derive2 { name="mscp"; version="1.0"; sha256="18cy7nnvhpjl874bawsh8j1gry9wx134q6gk6j03s6546bzy8lgc"; depends=[]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscstts = derive2 { name="mscstts"; version="0.6.2"; sha256="0mf3hs150gz39s0lh2fqbpg632n7rmmb8ns5swgx2wi3svhrk5lm"; depends=[httr jsonlite tuneR]; }; @@ -12018,11 +12510,13 @@ in with self; { msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; msgps = derive2 { name="msgps"; version="1.3.1"; sha256="0r8i0sw412jr148bid8sfpjcfbkf5589dqcqyvf5cm84cj7axnpz"; depends=[]; }; msgr = derive2 { name="msgr"; version="1.1.2"; sha256="15s3d77xqczjydgcfx4jlsq408hgsm8yzqk5248v58vm6zy36mh0"; depends=[purrr rlang]; }; - msigdbr = derive2 { name="msigdbr"; version="7.2.1"; sha256="1rc2p9vw57pn4prmfgay4w18qd53ggq7wxfsi9kp7w25ciip1dq1"; depends=[dplyr magrittr rlang tibble tidyselect]; }; + mshap = derive2 { name="mshap"; version="0.1.0"; sha256="1q01q1w5wsiynabsvd5vl5jffiyxrmyj4ad6b07zhja0ff6b2n9j"; depends=[dplyr forcats ggbeeswarm ggplot2 magrittr purrr rlang stringr tidyr tidyselect]; }; + msig = derive2 { name="msig"; version="1.0"; sha256="0gqd0kqlzhvp9widgjxbi5rz75bx0rkbnwbagjmzfv49f8g7yh46"; depends=[crayon do dplyr httr jsonlite kableExtra plyr rvest set sqldf stringr tmcn xml2]; }; + msigdbr = derive2 { name="msigdbr"; version="7.4.1"; sha256="103m52av68pkjfh8f81qh6j3cs1mj1lg831ciwybr34cax767jr1"; depends=[babelgene dplyr magrittr rlang tibble tidyselect]; }; msir = derive2 { name="msir"; version="1.3.3"; sha256="1wm83m3cqd6llxb9p2jwim0wb81v84pgdmgcznygzaaq6kbn3n84"; depends=[mclust]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; msm = derive2 { name="msm"; version="1.6.8"; sha256="1d32y8f0vb2dfv3999liigpns788j145nrvd1xpxb9i2lsg8mwgk"; depends=[expm mvtnorm survival]; }; - msma = derive2 { name="msma"; version="2.1"; sha256="1k1xfbwyapwjs7bp9v0vrdfrz54hsyxh562xni1n8m61l4gwkvzx"; depends=[mvtnorm]; }; + msma = derive2 { name="msma"; version="2.2"; sha256="1p6lm07wlwyymhj2bpwn9kvxf6q2c6rf9554swnm8gkm1z82324f"; depends=[]; }; msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="2.0.1"; sha256="09an9bpr0gnqbglb8kj4x8bb7f5dm2lc3d01wx6dh7j1d99vrrdk"; depends=[data_table ggplot2 msm patchwork scales survival]; }; msos = derive2 { name="msos"; version="1.2.0"; sha256="1fg9q6269cckn4g6isv22k22mzglxhjxjg5npqsikmisribmr9kb"; depends=[mclust tree]; }; @@ -12050,7 +12544,7 @@ in with self; { mueRelativeRisk = derive2 { name="mueRelativeRisk"; version="0.1.1"; sha256="16yclfmgxc32pv00vyb9fjdh4syax8ynizr8a29haiq22q5fqclh"; depends=[]; }; muhaz = derive2 { name="muhaz"; version="1.2.6.4"; sha256="1ddy8ayr4rdhzcipdvxdwd7z5g9hfp0ppacl7xf6f2612cn1185g"; depends=[survival]; }; muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; - mully = derive2 { name="mully"; version="2.1.31"; sha256="0xpwb6zlzrwlqf26fd3phh885yk5vdaqg2k77zq0fq60mdn63r5v"; depends=[igraph randomcoloR rgl shape]; }; + mully = derive2 { name="mully"; version="2.1.33"; sha256="1b2yb7iwannk8q9ifs4kqndjchc4wqc0qhxsg168xcwkxfd2ykkk"; depends=[igraph randomcoloR rgl shape]; }; mulset = derive2 { name="mulset"; version="1.0.0"; sha256="0pigiy6hfiqh6x4zx6zqn3ykk36s3abzzyb67jdlf4jzc5zhrl9g"; depends=[digest gtools]; }; multDM = derive2 { name="multDM"; version="1.1.3"; sha256="16bvr62lxmrq79z856iigwz5cjhk327x4hhd0cg3adgabqcz04yp"; depends=[MTS]; }; multbxxc = derive2 { name="multbxxc"; version="1.0.1"; sha256="1ip5awjc2ljpy6nsr4y42x0yg4n7lyaxp9kzfjvwp41k9lriz4gm"; depends=[Rcpp RcppArmadillo rmumps]; }; @@ -12058,7 +12552,7 @@ in with self; { multcompView = derive2 { name="multcompView"; version="0.1-8"; sha256="1rfq9wvvrghq0542ff40wy8vdmsyd8spzz6ihcywcvxdfa8m6g8j"; depends=[]; }; multdyn = derive2 { name="multdyn"; version="1.6"; sha256="06yab2lmxp7lc7zjk8n194mn5vza0yjbp276iair3ry35my4h3v8"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; multfisher = derive2 { name="multfisher"; version="1.1"; sha256="0vzvq7v2xz35fx8pg25c9xqkic09k6fcg9zh81j7pgqmzi2wwrp8"; depends=[]; }; - multgee = derive2 { name="multgee"; version="1.7.0"; sha256="0f7lwla0i0why8lk4fsyxsc1qhyq4asqvy5pr04mqfxxr8x3nm5v"; depends=[gnm VGAM]; }; + multgee = derive2 { name="multgee"; version="1.8.0"; sha256="1cp3762901af93m0i3m61ngnxbwjirjg46mkdcj0ycmk7phh7bcc"; depends=[gnm Rcpp RcppArmadillo VGAM]; }; multiApply = derive2 { name="multiApply"; version="2.1.3"; sha256="0ymxf5y48ki9v75bn8v3gs3fndmb41sl2f2xif9ah9962g64x0p7"; depends=[doParallel foreach plyr]; }; multiAssetOptions = derive2 { name="multiAssetOptions"; version="0.1-2"; sha256="0ci17bjl7k2id7grlynisvjfmmgrmq5f5lf8kh5xbq70gmvxh7v9"; depends=[Matrix]; }; multiCA = derive2 { name="multiCA"; version="1.1"; sha256="1vgb13cfq10g8hxykgi3is3mrlbm76vh40cznapl7xxmw226ccrl"; depends=[bitops multcomp]; }; @@ -12070,48 +12564,54 @@ in with self; { multiROC = derive2 { name="multiROC"; version="1.1.1"; sha256="15ydbxpkdyvsc55di13jvwh9p6dzxc1yj93w1cwsd8jp2y10wsd3"; depends=[boot magrittr zoo]; }; multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; }; multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; }; + multiblock = derive2 { name="multiblock"; version="0.8.0"; sha256="1xf1i8ra3241vp7l1w1spavixjd4laii8ynjw5mjbslvwablllfn"; depends=[ade4 car FactoMineR geigen knitr lme4 MASS MFAg mixlm plotrix pls plsVarSel pracma progress r_jive Rcpp RcppEigen RegularizedSCA RGCCA RSpectra SSBtools]; }; multibridge = derive2 { name="multibridge"; version="1.1.0"; sha256="17xcngn6q2wgaxcspfigcvzp6zh2bq8vhmfb3gn9ryq1rf2fchfv"; depends=[Brobdingnag coda magrittr mvtnorm progress purrr Rcpp Rdpack stringr]; }; multicastR = derive2 { name="multicastR"; version="2.0.0"; sha256="0zxv3kxk8gh2fgllzzg7k625n3p4q5pr465ja0mhvs48m4n262l9"; depends=[]; }; multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; }; - multiclassPairs = derive2 { name="multiclassPairs"; version="0.4.2"; sha256="1y9lh3am774nzhcwd74jwrfj95hhqzw2y610cwcq6cjxcz36rjrx"; depends=[Boruta caret dunn_test e1071 ranger rdist]; }; + multiclassPairs = derive2 { name="multiclassPairs"; version="0.4.3"; sha256="0mz15dl3fiznbnfjjmnhr9z6qh43mwafnkisd7svc3cb0lrbbjci"; depends=[Boruta caret dunn_test e1071 ranger rdist]; }; multicmp = derive2 { name="multicmp"; version="1.1"; sha256="0mz7ksc5h6dy95l3kbsamm191372blhlrj573krc57bj93lmp1a5"; depends=[numDeriv]; }; multicolor = derive2 { name="multicolor"; version="0.1.4"; sha256="1yswpqm62cvpfj6zxrprbvamjah3zxhsvn19qgpqmha0098lx5g2"; depends=[cowsay crayon dplyr glue magrittr purrr stringi stringr tibble tidyr]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; - multicool = derive2 { name="multicool"; version="0.1-11"; sha256="0xk408qbz9cxwf51j3pmy55gcjcnws8mc6j3vyn9zhramxj7x40w"; depends=[Rcpp]; }; + multicool = derive2 { name="multicool"; version="0.1-12"; sha256="0djacq0irfqz4nlnx238kja73yvr1n5qybbfyl6bw1n6qgcjhza8"; depends=[Rcpp]; }; multicross = derive2 { name="multicross"; version="2.1.0"; sha256="17hk03wsms9ij6hp6dw77cvvngdb5i66is6pcl1q21pyp327zqi6"; depends=[crossmatch MASS Matrix nbpMatching]; }; + multid = derive2 { name="multid"; version="0.1.0"; sha256="07nj420vfgk7whr9gvbb3cr4hy92cfwzbb9g63n5chw2wbf358d2"; depends=[dplyr glmnet]; }; multidplyr = derive2 { name="multidplyr"; version="0.1.0"; sha256="1a0ird0v7i09wd734i6cs31p14ixhrnv282br2k2q5akkpcxgfny"; depends=[callr crayon dplyr magrittr qs R6 rlang tibble vctrs]; }; - multifear = derive2 { name="multifear"; version="0.1.1"; sha256="1986f2qbl5m2kb1g8fr0r9dswm8k2p3zj40l6chlym7qjdjwm73z"; depends=[BayesFactor bayestestR bootstrap broom dplyr effectsize effsize esc ez forestplot ggplot2 nlme purrr reshape2 stringr tibble]; }; + multifear = derive2 { name="multifear"; version="0.1.2"; sha256="15nxyb17qzwld3ngw5k60nsr5nnam09jc1ky87rvsvslj6f3v696"; depends=[BayesFactor bayestestR bootstrap broom dplyr effectsize effsize esc ez forestplot ggplot2 nlme purrr reshape2 stringr tibble]; }; multifluo = derive2 { name="multifluo"; version="1.1"; sha256="1hnh1gj6lfnh2fn0v064bszydgsr6p9f7p8yxyw5rdxfrxymiw09"; depends=[agricolae ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; - multigraph = derive2 { name="multigraph"; version="0.93"; sha256="1966c38y7a7ik1a0sn3vcprckjphz7xvd6hkq3nhf4xdarbnwrxv"; depends=[multiplex]; }; + multigraph = derive2 { name="multigraph"; version="0.96"; sha256="1vk57cgmm7nigv6zmd9amwm3gddfpadkjr9blhckfla25n54h7r8"; depends=[multiplex]; }; + multigraphr = derive2 { name="multigraphr"; version="0.1.0"; sha256="018kwpphwkpm07by7pvrwp5wvrasnpaxbs67pdrbfxzc139d15q9"; depends=[]; }; multigroup = derive2 { name="multigroup"; version="0.4.5"; sha256="1d3m2c3md9iiv1gfqfyik1xj3fsas85bmf2vbkaks8ljxa42f55k"; depends=[MASS]; }; multilaterals = derive2 { name="multilaterals"; version="1.0"; sha256="11zfdhn6qzqz0n31g23bn40wnfzkjndb753iiqvihirphzb74v5v"; depends=[ape igraph]; }; multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.5"; sha256="0926jaicdxk846vyfphb2hyg3zan3wal44x1bwamws0zf4flc4hj"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; multilevelTools = derive2 { name="multilevelTools"; version="0.1.1"; sha256="01fzx7j0mkb4fr7axv34184w6w5nfsdcr51nscci1mi5b2805x1s"; depends=[cowplot data_table extraoperators ggplot2 JWileymisc lavaan lme4 lmerTest nlme zoo]; }; multilinguer = derive2 { name="multilinguer"; version="0.0.4"; sha256="0kavgvbzv8bvv9qlr92j8mx7b802w513mqalrdyln0pw36c9i13x"; depends=[askpass fs rstudioapi rvest sys usethis xml2 zip]; }; - multimark = derive2 { name="multimark"; version="2.1.2"; sha256="15qdj3h5j30i56yx089pq8iii5kkk3ay6xr6z2msk22zj1rv7ahh"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; + multimark = derive2 { name="multimark"; version="2.1.3"; sha256="13arvjxfnxq7dr5r8cqwxxkravwwf4dq5hq263ss353fdi2qv4i0"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; multimode = derive2 { name="multimode"; version="1.5"; sha256="0qxb67qss2pmid0wiwblqng5qmihqchdhbkyjklgj20pvbjz1wjm"; depends=[diptest ks rootSolve]; }; + multimorbidity = derive2 { name="multimorbidity"; version="0.5.0"; sha256="1x4869pqckldx6g4zhawjbin03glkxzfszb4qiq7yy2xi444jkl0"; depends=[devtools dplyr lubridate magrittr rlang sqldf stringr tidyr tidyselect tidyverse]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; - multinet = derive2 { name="multinet"; version="3.3.2"; sha256="1nq12avlvfglpm1238nhwcixd9bvb0a87842ksq2bdm6jgmikv6j"; depends=[igraph RColorBrewer Rcpp]; }; + multinet = derive2 { name="multinet"; version="4.0"; sha256="07h8xhppgdf9a6aka8kldpvmngcnxcrq7jw4sar05ib939laj922"; depends=[igraph RColorBrewer Rcpp]; }; multinets = derive2 { name="multinets"; version="0.2.2"; sha256="1i5jsq1xy0g0l5d1z3hz4gj6inj4rhd6lf2s5xzd5k8ccp5aba8c"; depends=[igraph Rcpp]; }; multinma = derive2 { name="multinma"; version="0.3.0"; sha256="0841p1lg54cbyxca89y0rw6542bjrxhlvcjkp77vswcjsnx5ay4a"; depends=[bayesplot BH copula dplyr forcats ggdist ggplot2 ggraph glue igraph Matrix purrr randtoolbox Rcpp RcppEigen RcppParallel Rdpack rlang rstan rstantools StanHeaders stringr tibble tidyr truncdist]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; multinomineq = derive2 { name="multinomineq"; version="0.2.1"; sha256="09h5nccfcrnl78rdxwsw5cqirfq40a6x4dmpkibc475z3xndk2rm"; depends=[coda quadprog Rcpp RcppArmadillo RcppProgress RcppXPtrUtils Rglpk]; }; multipanelfigure = derive2 { name="multipanelfigure"; version="2.1.2"; sha256="0cm5bd7k0fx6d3gybcll6vvh14byanyk6dj4civqij7psa48iagc"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; multipleNCC = derive2 { name="multipleNCC"; version="1.2-2"; sha256="0bnc14l5b3x68qnwf3ma8wrclmp6n7fxsc0sbd7cfaayhp8dzcb1"; depends=[mgcv survival]; }; - multiplex = derive2 { name="multiplex"; version="2.9.4"; sha256="0c1gpmh1jric8zzip5m3fr8wjxiqa7jhfklgdni22shlccnjxn33"; depends=[]; }; + multiplex = derive2 { name="multiplex"; version="2.9.6"; sha256="0dy34ijdk83gjmmwjwkdzpr0wzrcg4xpw5s08jv59af1asyrr3n7"; depends=[]; }; multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; - multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; - multiridge = derive2 { name="multiridge"; version="1.7"; sha256="09l769i980xcrln3gwmlsx5zr7fy7iawwgjzv5vmamsgg73ijwfz"; depends=[mgcv pROC risksetROC snowfall survival]; }; + multirich = derive2 { name="multirich"; version="2.1.3"; sha256="1vv4jhhq46wp6znfv9c47q9z4smn1c560wnbp77qfhiix098wzfj"; depends=[]; }; + multiridge = derive2 { name="multiridge"; version="1.9"; sha256="1z77gabrm8dpyp4fssh1rqw58y1fspp5ypv2xybwr7k3fbvyd1vg"; depends=[mgcv pROC risksetROC snowfall survival]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; multisensi = derive2 { name="multisensi"; version="2.1-1"; sha256="0f8i1jvrnmdsws5w7fz9k5pb5yfl5b9hnfd8aq4zj1r6m90kb6sz"; depends=[knitr sensitivity]; }; + multisite_accuracy = derive2 { name="multisite.accuracy"; version="1.0"; sha256="1mhj8xsysqvyx823hjacsy1k9kmi7z13cwkjk42gz9a95dvlilm6"; depends=[AROC coxme lme4 lmerTest logistf metafor pROC survival]; }; multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; multitaper = derive2 { name="multitaper"; version="1.0-15"; sha256="1gm3wr8xqpqiby7q1dr3zxim77v0bvvrqi0hlazf5g3gnkrp2zc3"; depends=[]; }; multivar = derive2 { name="multivar"; version="0.0.2"; sha256="0ijv7zsznqsf8g6lgnaccfi76j04ycxd0zgjw5wbf03in5vxzlpc"; depends=[MASS Rcpp RcppArmadillo]; }; multivariance = derive2 { name="multivariance"; version="2.4.0"; sha256="0bnhcmpkavac8m2bdn8yb4nimxna2480inqxw3jm0j5j2fpdgfh9"; depends=[igraph microbenchmark Rcpp]; }; multivator = derive2 { name="multivator"; version="1.1-9"; sha256="0vbqvhmym46zjr1h4s53sjrddfjpv8wi0sq4lrh2rmqarq068416"; depends=[emulator mvtnorm]; }; + multiverse = derive2 { name="multiverse"; version="0.5.0"; sha256="1mffmcbc5l4753dj7h9h82gf76xbigrbb5lbwjr5ycpcyzcpsldk"; depends=[berryFunctions collections dplyr evaluate formatR knitr magrittr purrr R6 rlang rstudioapi tibble tidyr tidyselect]; }; multiviewtest = derive2 { name="multiviewtest"; version="2.0.0"; sha256="09svd9jbvn92vkaifr33vg5scyh6311kpkr0lgsdj6lycz9cb4q7"; depends=[doParallel foreach irlba Matrix matrixStats mclust randnet]; }; multiwave = derive2 { name="multiwave"; version="1.4"; sha256="19581kjcyw86cnzhvhhpn997fixm811ggmvb8jkb3dsxg8vp60jc"; depends=[]; }; multiway = derive2 { name="multiway"; version="1.0-6"; sha256="1y9cykarr2aysdrnyab5aklsrc5id5b58881q03lcb5kc385v3gv"; depends=[CMLS]; }; @@ -12126,52 +12626,55 @@ in with self; { music = derive2 { name="music"; version="0.1.1"; sha256="04ygmlga7i8bpxcrlmj8wc956asf73krghga6fnh2flm675dp42f"; depends=[audio crayon]; }; musicNMR = derive2 { name="musicNMR"; version="0.0.2"; sha256="09xxc78ajk428yc3617jfxqp5fy89nfc24f1rig6cw28fflwqj0k"; depends=[seewave]; }; musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; }; + mustashe = derive2 { name="mustashe"; version="0.1.4"; sha256="1rj5vh8bi88c0q4gq2lvbqcg3k63z8pgwylqli8zyq9xb3argab1"; depends=[digest formatR here qs tibble]; }; mut = derive2 { name="mut"; version="1.1"; sha256="0v0vviarsmaiap3fa82ia01cblana65fd3cbj7jkd3aral6pm6yz"; depends=[expm Familias IBDsim paramlink]; }; mutSignatures = derive2 { name="mutSignatures"; version="2.1.1"; sha256="0skw92633mwckkkgkncfv09wvnr910nf4wdbqz0a61cl7mxlsr25"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; }; mutoss = derive2 { name="mutoss"; version="0.1-12"; sha256="1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"; depends=[multcomp multtest mvtnorm plotrix]; }; mutossGUI = derive2 { name="mutossGUI"; version="0.1-11"; sha256="08pcca9gzns83az6jbjzv4xhm1wgmchhzz4f54x1aq0nmvsz3qq1"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; + mutualinf = derive2 { name="mutualinf"; version="1.1.1"; sha256="07wlmdjn2q4g7dy2kz8mabkm8i9l18k4k2qxwm38q54436aacczc"; depends=[data_table]; }; mvGPS = derive2 { name="mvGPS"; version="1.1.1"; sha256="02yr24lqiq3xagh95pki9wm8wxa5awpmwdm8gj6p5dhlrngxxjpd"; depends=[CBPS cobalt gbm geometry MASS matrixNormal Rdpack sp WeightIt]; }; - mvLSW = derive2 { name="mvLSW"; version="1.2.3"; sha256="05g6v4jbg1km2215lxbwzx8frr4in7xal9pai3y6l23d66lvh1iz"; depends=[fields wavethresh xts zoo]; }; + mvLSW = derive2 { name="mvLSW"; version="1.2.4"; sha256="04x0b8b7r4lmpmxvjckbvixd34nxjmj13in1gwdhf6gzn2k7p830"; depends=[fields wavethresh xts zoo]; }; mvMISE = derive2 { name="mvMISE"; version="1.0"; sha256="0lnc5g3ksl5cvwylh8p8baxyvq3z32a2i337q7lhg00j031ccy5c"; depends=[lme4 MASS]; }; mvMORPH = derive2 { name="mvMORPH"; version="1.1.4"; sha256="0dxqi9ml49hzpdgb03fqk1af8rirdcgi5pwil87c89g638c37nrq"; depends=[ape corpcor glassoFast pbmcapply phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; mvPot = derive2 { name="mvPot"; version="0.1.5"; sha256="18kzlz42ridmwjrai6f598vvhmvk7gwyp869qjqclbf9jpc1xlcx"; depends=[evd gmp MASS numbers]; }; mvProbit = derive2 { name="mvProbit"; version="0.1-10"; sha256="1iy249mc5fi72l0lcvjrn40fn6q1m8hj8njcl0li2z6lzydifkd4"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; - mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.6.3"; sha256="11h14mwvv6xci8n355yd17115giyc6ny5gidrrmrf8npi43rrmsz"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; + mvSLOUCH = derive2 { name="mvSLOUCH"; version="2.6.5"; sha256="1ahzpfb178n5rxm1rh5qf0h66am5mfmx1g3cwaz27k7g5c00j20x"; depends=[abind ape Matrix matrixcalc mvtnorm ouch PCMBase TreeSim]; }; mvShapiroTest = derive2 { name="mvShapiroTest"; version="1.0"; sha256="0zcv5l28gwipkmymk12l4wcj9v047pr8k8q5avljdrs2a37f74v1"; depends=[]; }; - mvabund = derive2 { name="mvabund"; version="4.1.9"; sha256="19kyg0agjk7gxipa5kmklz4cqh97xrdbibmmy1g99r1gp3s9ml30"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; + mvabund = derive2 { name="mvabund"; version="4.1.12"; sha256="107pwv2bwird1a98chcnbld2wqj9prkf4pkncyrrp304zpdkkby1"; depends=[MASS Rcpp RcppGSL statmod tweedie]; }; mvbutils = derive2 { name="mvbutils"; version="2.8.232"; sha256="0awd0jy492ha321c20kmmgl20kqphdmrmswakc0rq6h8z9d55kdg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; mvctm = derive2 { name="mvctm"; version="1.2"; sha256="0810bmk748cvbls4djspqvkk65j605djqicqg4rkwy2a799l3rgc"; depends=[Formula MNM nlme quantreg Rfit SpatialNP]; }; - mvdalab = derive2 { name="mvdalab"; version="1.4"; sha256="18wchy517qd45w5y0sr8lcafb7kmscy0q9vsryk9if6x2jq22lqz"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; + mvdalab = derive2 { name="mvdalab"; version="1.6"; sha256="0i4hhm9bkp13j8cy6fspdn619d00jh615njwr49rwzgjyj418k6l"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; mvglmmRank = derive2 { name="mvglmmRank"; version="1.2-2"; sha256="00zxqby8syb959fqgw9i7b0yamgjwddq32jlin6qmnzys5bg1556"; depends=[MASS Matrix numDeriv]; }; mvinfluence = derive2 { name="mvinfluence"; version="0.8-3"; sha256="0nygsldkm61ny5ljcc1r667rywj239j4x59ssi81cb2005kkjgm5"; depends=[car heplots]; }; mvmesh = derive2 { name="mvmesh"; version="1.6"; sha256="1y6p7xp9fv0xswjdc6py1xqlx1ys1iyr559s9wkyja4hzcpya2my"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; mvmeta = derive2 { name="mvmeta"; version="1.0.3"; sha256="08zki4bxd7l5hpa9dly9jw796kn4rfv6v6gmx21yvfppyryrvmvd"; depends=[mixmeta]; }; mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; }; mvna = derive2 { name="mvna"; version="2.0.1"; sha256="10i42hjm5bk62c20pmxhya283yzw1902ivkflmyqy79jri266dxf"; depends=[lattice]; }; - mvnfast = derive2 { name="mvnfast"; version="0.2.5.1"; sha256="193hi0vwc3p7dpac0y4ynm0c5sc3kcq20lwp6gbc4zpnqg9g94v3"; depends=[BH Rcpp RcppArmadillo]; }; + mvnfast = derive2 { name="mvnfast"; version="0.2.7"; sha256="0whbivpl23n251ir3b10m287r3nz4dxvpxlycrvnjilsdj9m0zdn"; depends=[BH Rcpp RcppArmadillo]; }; mvngGrAd = derive2 { name="mvngGrAd"; version="0.1.5"; sha256="0ir4pakfb2jq84rbfqix6rph8q6cgadjdn49rrdl4439b8hlsg8k"; depends=[]; }; mvnormalTest = derive2 { name="mvnormalTest"; version="1.0.0"; sha256="1hbapcmj1rzrdzlbkay94f3r2388sk60zizh48vbbkc83qlm7xbr"; depends=[copula moments nortest]; }; mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; }; mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; }; mvord = derive2 { name="mvord"; version="1.1.1"; sha256="0flqdsjigv8c6ygiih17kp22yrbs2wqydadqi5ij145a6r8bpkml"; depends=[BB dfoptim MASS Matrix minqa mnormt numDeriv optimx pbivnorm ucminf]; }; - mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; }; + mvoutlier = derive2 { name="mvoutlier"; version="2.1.1"; sha256="1ll6zsy8svcsb3h60p0z2zpbgn919j9w0mamsdvvzi87dyy4hars"; depends=[robustbase sgeostat]; }; mvp = derive2 { name="mvp"; version="1.0-8"; sha256="0i2fd9s0dlpaa4vwkiq5is2d4vxc90hkdl0yk57gl651i8nxwnha"; depends=[magic magrittr mpoly partitions Rcpp]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; - mvrsquared = derive2 { name="mvrsquared"; version="0.1.1"; sha256="1bvq5m33ff4igvg7b1wdp8g393qxswlhbpr3gm05fnbsxzlna10p"; depends=[Matrix Rcpp RcppArmadillo RcppThread]; }; + mvrsquared = derive2 { name="mvrsquared"; version="0.1.2"; sha256="1x9ck55b5fiakvbn2nr3h75ksawjaijm2bg1xqavncl3cvlfqahl"; depends=[Matrix Rcpp RcppArmadillo RcppThread]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; mvst = derive2 { name="mvst"; version="1.1.0"; sha256="03q0kdychsmn4wcn50b6dqhxn4f2mjvrr5rac942xdv75w8qklc9"; depends=[MCMCpack mnormt mvtnorm]; }; mvtmeta = derive2 { name="mvtmeta"; version="1.1"; sha256="0s0s5922c5rs8cqk100nci3akqnhbvibm2n2gn8049v3qcyfajyb"; depends=[gtools]; }; - mvtnorm = derive2 { name="mvtnorm"; version="1.1-1"; sha256="1pj51mi0g6ip7a2nhzc93yv9289kaayvspjvsbgbgarvx7axlrg9"; depends=[]; }; + mvtnorm = derive2 { name="mvtnorm"; version="1.1-2"; sha256="05wh7mprf2sim2kxh3d72pdcmml6vbikzxavws1dq6mxwlsy2p7j"; depends=[]; }; mvtsplot = derive2 { name="mvtsplot"; version="1.0-1"; sha256="0g5grrha77rsnkfasw5pxnpmkl7vgb728ms8apyg8xnbmgilg9vv"; depends=[RColorBrewer]; }; + mwTensor = derive2 { name="mwTensor"; version="0.99.1"; sha256="00mfipz95zsvjgvlidr7g2z7q5xss1c64p3rizz1wzcfj3rj8rwn"; depends=[ccTensor ica igraph MASS nnTensor rTensor]; }; mwa = derive2 { name="mwa"; version="0.4.3"; sha256="100d3c1070ir64iv848kws5fna141gcq5p66ip873cr632a042qs"; depends=[cem MASS rJava]; }; mwaved = derive2 { name="mwaved"; version="1.1.7"; sha256="0g0yddsgdfyvqaj59qi6k3sknpbppdmgvq0rgnil5q8ki5skvgis"; depends=[Rcpp shiny]; }; mwshiny = derive2 { name="mwshiny"; version="2.1.0"; sha256="0c1a0d9qnaszffhzanmk31mdxqi7j3rn6bk7a3dwg4bq1da3rlgl"; depends=[htmltools shiny]; }; mxkssd = derive2 { name="mxkssd"; version="1.1"; sha256="0m9763dqrk8qkrvp18bsv96jv0xhc2m8sbxdk6x3w6kdjcl663p2"; depends=[]; }; - mxmmod = derive2 { name="mxmmod"; version="1.0.1"; sha256="0rb0dqd4dzf5agij4cikz9a8cf6saz2q7bybxjagb8y4yjyhy2xv"; depends=[OpenMx]; }; + mxmmod = derive2 { name="mxmmod"; version="1.1.0"; sha256="0x4m6y4ngb3vm9xpvwvn1zcbch2fhz8pb267hg2sb3kk5m504xxq"; depends=[OpenMx]; }; myTAI = derive2 { name="myTAI"; version="0.9.3"; sha256="0fd6srvwzqir8zif56cnyi02c952fgc67xzc17wn7xvmvljfvh4x"; depends=[cpp11 doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp RcppArmadillo readr reshape2 scales taxize tibble]; }; mycobacrvR = derive2 { name="mycobacrvR"; version="1.0"; sha256="1xd9ackzdd8db6bayza0bg4n256mi9rdqih0cdc0nl212c3iz75g"; depends=[]; }; mycor = derive2 { name="mycor"; version="0.1.1"; sha256="00hqmvga22bv43833s974s7ky7lbry3r2bb5kza7kvkn1p6773rg"; depends=[lattice]; }; @@ -12179,9 +12682,9 @@ in with self; { mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; n1qn1 = derive2 { name="n1qn1"; version="6.0.1-10"; sha256="1diwhw636cnwjlw291vfp1z53xaxhmhafbqfzk2m0yqs0ih0pm09"; depends=[Rcpp RcppArmadillo]; }; nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; - nCal = derive2 { name="nCal"; version="2020.9-10"; sha256="1m3d2fskd1vlmwwrhdqs9040fjnjc7jsdsxs0y3m9db7kd1n84iw"; depends=[drc gdata gWidgets2 kyotil]; }; + nCal = derive2 { name="nCal"; version="2021.9-12"; sha256="133dpy2rp8sabwdlk0wjxs9rzixzcja73im94qaw26z5xsnaydhf"; depends=[drc gdata gWidgets2 kyotil]; }; nCopula = derive2 { name="nCopula"; version="0.1.1"; sha256="03qbfvx0lg9prg52fk1jxar2bng2x6scac4g2c64kvp6vmf6x4mv"; depends=[copula Deriv stringi stringr]; }; - nCov2019 = derive2 { name="nCov2019"; version="0.4.4"; sha256="096za68qwlharm0v67hcpmh2i9wzqs5p7l4gv30g4zlq97wgkqpq"; depends=[downloader ggplot2 jsonlite RColorBrewer]; }; + nCov2019 = derive2 { name="nCov2019"; version="0.4.5"; sha256="0hk3lc5yxycl2qi895w43c3dcpxcqn2k6d5jc25j7ip6b0dq7w70"; depends=[downloader ggplot2 jsonlite RColorBrewer]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.4.1"; sha256="1diybai7pwaj9adn60b7nhvvpjjkwg3jimwp2ahgca9askmv93h2"; depends=[lattice MASS psych]; }; nJira = derive2 { name="nJira"; version="0.1.1"; sha256="0vh167kxljp68f0dx307wl6fp8nlp34vgrkr815z30mhx03p8j9r"; depends=[httr plyr rjson]; }; @@ -12191,43 +12694,46 @@ in with self; { naaccr = derive2 { name="naaccr"; version="1.0.0"; sha256="1hw74a2gjm3gxq0s0qlndhqw0vij6p31walz1ic741z7hqsffqq7"; depends=[data_table stringi]; }; nabor = derive2 { name="nabor"; version="0.5.0"; sha256="1nj39cdfwrmhgsi3cq8imxv3n6xzc1v6dzdb2cf2hybjk368v4s7"; depends=[BH Rcpp RcppEigen]; }; nadiv = derive2 { name="nadiv"; version="2.17.1"; sha256="1v1fbnps55pbaz0q88y8vrxjd503krymc7f8i0xx3yxgdxl56x8q"; depends=[Matrix]; }; - naijR = derive2 { name="naijR"; version="0.2.2"; sha256="1bglap4pibi653wkm6qq2x4f1390ljnmq020zx0qr9515973lmsv"; depends=[lifecycle magrittr mapdata maps RColorBrewer rgdal rlang]; }; + naijR = derive2 { name="naijR"; version="0.3.0"; sha256="1lxmi8c48dw7lnwwpm9dq02w6y42bvm7n3xy1176zzk5nj1gzrdz"; depends=[lifecycle magrittr mapdata maps RColorBrewer rgdal rlang]; }; naivebayes = derive2 { name="naivebayes"; version="0.9.7"; sha256="070m78d8hsbqfbapb6g8vvh91gyznqfdpqsaq6z3raps8zlybsag"; depends=[]; }; naivereg = derive2 { name="naivereg"; version="1.0.5"; sha256="1cxfl419pp7xh1xrad29gvpn6hm0rhk40vylj97ypndh6gmnynzz"; depends=[glmnet gmm grpreg ncvreg]; }; - nakagami = derive2 { name="nakagami"; version="1.0.0"; sha256="1i9m1nlqfdk9k3bzf8qlfc11spzfqly49n1pk7phvykzjgd1c1s4"; depends=[assertthat]; }; + nakagami = derive2 { name="nakagami"; version="1.1.0"; sha256="0bxsg5k51x7qrw34l16da79ck212drkgvzgn9d5zanx5dwv5asl2"; depends=[assertthat]; }; namedCapture = derive2 { name="namedCapture"; version="2020.4.1"; sha256="0zdw3h3n4qjv9cpidb3g523ld6rrh49l2c1yhfqhk5wb7vddrs46"; depends=[]; }; namer = derive2 { name="namer"; version="0.1.5"; sha256="1687x6rc46bp2bmqkixzry5cc7lxjqwjk8ngrbg2fk7mzb4pwvnq"; depends=[dplyr fs glue magrittr purrr rstudioapi tibble]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; nametagger = derive2 { name="nametagger"; version="0.1.1"; sha256="17g8y7x83p1pkgj5hgildndchxsp70va25h93p7r1yjllm56zqv8"; depends=[Rcpp]; }; - nandb = derive2 { name="nandb"; version="2.0.8"; sha256="0cw0cl75z6r2nsdfg0bffnz9v0d8cpwyc7mnfkkhb7nmvsv0hiz3"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; - naniar = derive2 { name="naniar"; version="0.6.0"; sha256="0m3y9rh3qx8k66h8by0jvg4927k5azppdhihr413136xa57wd4ww"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr UpSetR viridis visdat]; }; + nandb = derive2 { name="nandb"; version="2.1.0"; sha256="1rbn4nibjzvwpccpmqn84w9a167f1avyl18kjlapy5dhafvixgbz"; depends=[assertthat autothresholdr BBmisc checkmate detrendr dplyr filesstrings ggplot2 glue ijtiff magrittr purrr Rcpp reshape2 rlang stringr viridis withr]; }; + naniar = derive2 { name="naniar"; version="0.6.1"; sha256="0l3l2x85v3srilww483kpgp4zlwixyml257b0cqly8kcpwawlinm"; depends=[dplyr forcats ggplot2 glue magrittr norm purrr rlang tibble tidyr UpSetR viridis visdat]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; nanostringr = derive2 { name="nanostringr"; version="0.2.0"; sha256="13rcc33zfqlx8m5bmr5hh87gp0g5wlg2cwlj1683kw9adj2y3fdf"; depends=[assertthat ccaPP dplyr epiR magrittr purrr rlang]; }; - nanotime = derive2 { name="nanotime"; version="0.3.2"; sha256="079bybkizlq51g4hfw1jclwfcw71i1wi344ia6lhbdh1r8xkrxcy"; depends=[bit64 Rcpp RcppCCTZ RcppDate zoo]; }; + nanotime = derive2 { name="nanotime"; version="0.3.3"; sha256="1q3xh7im77h70nyj7sl2rqzj4kcvwh27l9y9x36xyps7r6i8xfbi"; depends=[bit64 Rcpp RcppCCTZ RcppDate zoo]; }; naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; }; nardl = derive2 { name="nardl"; version="0.1.6"; sha256="1vf8im4zs4j0v3k617aaskq9n2fg8sn3j5bllcbz2ircrpijr21m"; depends=[car Formula gtools MASS strucchange tseries]; }; - narray = derive2 { name="narray"; version="0.4.1"; sha256="09n50shk2gy1m85kmvq8g3zh2nrikpllv8gph9x2id1p62rbqf1y"; depends=[progress stringr]; }; + narray = derive2 { name="narray"; version="0.4.1.1"; sha256="1xyyn6v3khk5x759fr9h96z036hbb87fzfqgdpw907bc95gjnkz9"; depends=[progress stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; - nasapower = derive2 { name="nasapower"; version="3.0.1"; sha256="012z2q3fzb7834g3axnw9ivwyq073kll14gds64ks0nlj2z3gcgl"; depends=[crul curl jsonlite lubridate readr tibble]; }; + nasapower = derive2 { name="nasapower"; version="4.0.0"; sha256="0j1vzyvr49r74882libacllj6k2lvdzs21knl4rx8yrdq8g2v8y4"; depends=[crul jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; - naspaclust = derive2 { name="naspaclust"; version="0.1.0"; sha256="0b4dayb1nlrxal6zpkgp3vc65vkyc6ikx030yarphqm9s6p9d7bx"; depends=[beepr rdist Rdpack stabledist]; }; - nat = derive2 { name="nat"; version="1.8.16"; sha256="0m60ysh02f7mg8rfjxn3vbyir4hnl3wpz56pnkjqq9clrnl145a9"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; + naspaclust = derive2 { name="naspaclust"; version="0.2.1"; sha256="1p4ilv2z5140h4kdix2w1v32vz1n8v33wq0fhc8n8mi7baknhd1i"; depends=[beepr rdist Rdpack stabledist]; }; + nat = derive2 { name="nat"; version="1.8.18"; sha256="0sbyd16109nbi20fk4fwjz0p9hva8pbn370a60wjwjgn9jd90b90"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; nat_nblast = derive2 { name="nat.nblast"; version="1.6.5"; sha256="0fp01rrvz7n84sdmfhi0wzd9mvg7wi682l4qg5dj82cm98v80l3p"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="1.0"; sha256="0bjib2brsq389b1rlznhwd81y9awk9qz57s4z5ai45gnsc7cfcgw"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; - nationwider = derive2 { name="nationwider"; version="1.1.1"; sha256="1crflv2wvrsyrhl612f7awvm0yfhl381q7pq190n3ydg093y32r6"; depends=[dplyr httr lubridate magrittr readxl rvest stringr tidyr xml2 zoo]; }; - natmanager = derive2 { name="natmanager"; version="0.4.7"; sha256="081r2gdcbh6xqrbmd6bpn9zd3lq4z7l9myk2xl2iwvmmdvk5qrak"; depends=[curl gh remotes usethis withr]; }; + natcpp = derive2 { name="natcpp"; version="0.1.0"; sha256="0fy27dq6w9i9rir2v22zimzxibsaj9n4gbsl70ca4q57mgprl1hn"; depends=[Rcpp]; }; + natmanager = derive2 { name="natmanager"; version="0.4.8"; sha256="19vrdxyk8p3ps0pamyihfzxivfhm2k40g1a0k03vb6jfy544ps3i"; depends=[curl gh remotes usethis withr]; }; natserv = derive2 { name="natserv"; version="1.0.0"; sha256="1j6m0fddrhq36qfjmj99zs77vxk5waqkshxi37pr2ccnis9hzy9h"; depends=[crul jsonlite tibble]; }; + natstrat = derive2 { name="natstrat"; version="1.0.0"; sha256="1n98bi2r2nlak2w6126lbnx4pnkld0vsk7zp8qma9qcq7yy02dg1"; depends=[caret ggplot2 plyr pps Rglpk rlang sampling]; }; + naturaList = derive2 { name="naturaList"; version="0.4.1"; sha256="0054al0wq7kh1vfziisn8dxk4zajivkvldfyp00hg62csshlgfgi"; depends=[dplyr fasterize htmltools leaflet leaflet_extras magrittr raster rlang sf shiny shinydashboard shinyWidgets sp stringr tidytext vegan]; }; natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; nawtilus = derive2 { name="nawtilus"; version="0.1.4"; sha256="1agqx9wiiypkpjrwahwlw5qkvqgkh01swyzc75csf9698x0779pm"; depends=[MASS]; }; nbTransmission = derive2 { name="nbTransmission"; version="1.1.2"; sha256="0vaj2zfyvm2vm1ly1419ysxxrqkv73802n96ifajknh1pair31zk"; depends=[caret dplyr lubridate poisbinom rlang tidyr]; }; nbapalettes = derive2 { name="nbapalettes"; version="0.1.0"; sha256="1wrh2qcm90fcybhcc8wvs2s4a4z8y3mrhc28dvrkwynqwzsbalzs"; depends=[dplyr]; }; nbconvertR = derive2 { name="nbconvertR"; version="1.3.2"; sha256="0yhmz177r1miain65vspclahhz8cg7638ldbpsw8ylgf7a60l0sg"; depends=[]; }; + nberwp = derive2 { name="nberwp"; version="1.0.0"; sha256="0f45bprdrly8zgpwrljmfch76gbai1lvknkiyqlfndilpcginfkw"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; nc = derive2 { name="nc"; version="2020.8.6"; sha256="19qsa5k38ajsbigccpch05m156n5wnd7c54j09fanjrpzy2048w2"; depends=[data_table]; }; ncappc = derive2 { name="ncappc"; version="0.3.0"; sha256="0bf00iskrd3x43839bwn957mi3qvm2dhcmqa7hl1ib0gp2r1cnzx"; depends=[bookdown Cairo dplyr ggplot2 gridExtra gtable knitr lazyeval magrittr PopED purrr readr reshape2 rlang rmarkdown scales tibble tidyr xtable]; }; - ncar = derive2 { name="ncar"; version="0.4.2"; sha256="12cz4mlcmg8vdcn6747q1vz20wyypf89jq3nzx17s3aki0vlnwmj"; depends=[NonCompart rtf]; }; + ncar = derive2 { name="ncar"; version="0.4.4"; sha256="1b37isgj7njpyh3js2kyl6vil9v8azh7n04m5yn4pcvyz02sqkx8"; depends=[NonCompart rtf]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf4 = derive2 { name="ncdf4"; version="1.17"; sha256="1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv"; depends=[]; }; ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-5"; sha256="0ybnnaqfd8mk9mk92q9gd4g1qr55vjxnpmgnwji6h52cdrqa5irx"; depends=[abind ncdf4 PCICt]; }; @@ -12241,59 +12747,62 @@ in with self; { ncvreg = derive2 { name="ncvreg"; version="3.13.0"; sha256="04r7nf6516wi0bfxgk5rgbkw6qqa8aprsjivvgym19z9i6qaxanm"; depends=[]; }; ndjson = derive2 { name="ndjson"; version="0.8.0"; sha256="0lvzbgfi1sg4kya1mvv67z14qk3vz9q57x22qh57xq8ampdkg812"; depends=[data_table Rcpp tibble]; }; ndl = derive2 { name="ndl"; version="0.2.18"; sha256="0b235v6jf98rrqp5aqw3jkk7mq8dbqmhb758zbzza1mavh4n2k7s"; depends=[Hmisc MASS Rcpp]; }; - ndtv = derive2 { name="ndtv"; version="0.13.0"; sha256="1qfjvq5wch256gmg7pw9jwda33r4963a8p8jmp27cmpzdwycvnzy"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; + ndtv = derive2 { name="ndtv"; version="0.13.1"; sha256="18d51xp62fis63p2prybhigxx03yhbrzs0k1yhh9j21548wzhb2l"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; nearfar = derive2 { name="nearfar"; version="1.2"; sha256="116rq797a5fascirz8xg465fywjf40j1k5czryvqzpik0if0w00r"; depends=[car GenSA MASS nbpMatching]; }; neariso = derive2 { name="neariso"; version="1.0.1"; sha256="1b2gnws75kkqsi8mg9n0zzdaawx57a6zz47cswabj5m6nb09ikh8"; depends=[]; }; neat = derive2 { name="neat"; version="1.2.3"; sha256="0mdv47l50wzxnjfk1sway7gzpkyf57svqip16fqn0hrc1fsrifbn"; depends=[igraph]; }; neatRanges = derive2 { name="neatRanges"; version="0.1.3"; sha256="1zfp6f1q7m0bks0shvzr120nd5jxba28xhi7vrd55qfy7g72167g"; depends=[data_table Rcpp]; }; - neatStats = derive2 { name="neatStats"; version="1.5.1"; sha256="1cyfm9mq691iyi0890gp1kszc98544fhjl35mn3varjbddm64a5p"; depends=[BayesFactor bayestestR car Exact ez ggplot2 ggpubr logspline MBESS plyr PoweR pROC]; }; + neatStats = derive2 { name="neatStats"; version="1.7.3"; sha256="0zkx22irhjkds1l2ypj8nkc1yz15pc90rbfgy1y6jh5l6a3dgdhx"; depends=[BayesFactor bayestestR car Exact ez ggplot2 ggpubr logspline MBESS plyr PoweR pROC viridis]; }; neatmaps = derive2 { name="neatmaps"; version="2.1.0"; sha256="1kz1na3fzpd8vkxmpp5rz8ksyf8q2wk456csiii82winv9a2zxc9"; depends=[ConsensusClusterPlus dplyr ggplot2 heatmaply igraph]; }; needmining = derive2 { name="needmining"; version="0.1.1"; sha256="0qsj0ihjchrnl4s44rpsizbcz033z00dmzvic2y1msv0bnfawl6p"; depends=[randomForest rtweet SnowballC SparseM stringr tau tm]; }; needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; }; needy = derive2 { name="needy"; version="0.2"; sha256="1ixgpnwrg6ph1n5vy91qhl1mqirli9586nzkmfvzjrhdvrm0j5l0"; depends=[]; }; negenes = derive2 { name="negenes"; version="1.0-12"; sha256="0b82822vl86gni0pv5f6pjfzmks35i7q2rqkhgyb9z9c677g991q"; depends=[]; }; neighbr = derive2 { name="neighbr"; version="1.0.3"; sha256="1rmglfjmx6bfd4w1cpx4rvp7hy2vqvcamy854h5dq0l3kwk4pjcm"; depends=[]; }; - neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; }; neo2R = derive2 { name="neo2R"; version="2.1.0"; sha256="1fhi74d4730pxrmv1p2gz8ylvnilxn4l837nha6ndyhy00xfgkk6"; depends=[base64enc jsonlite RCurl]; }; neo4jshell = derive2 { name="neo4jshell"; version="0.1.1"; sha256="03qnv5xf7dvlzq259brfwk7vfr05q7labakv9mj27x70yhxq1z7m"; depends=[fs magrittr R_utils ssh sys]; }; neo4r = derive2 { name="neo4r"; version="0.1.1"; sha256="0s4rjhn2mc8ca4p8p474a83dc277vrf7l968xwxkiac0d4fgbra7"; depends=[attempt data_table glue httr igraph jsonlite magrittr purrr R6 rlang rstudioapi shiny tibble tidyr tidyselect]; }; - neonUtilities = derive2 { name="neonUtilities"; version="2.0.1"; sha256="1cvar2bmyh89lsc1h6bpv9bqr3p74bm9g016bysamk34rp4fx83h"; depends=[curl data_table downloader dplyr httr jsonlite pbapply R_utils readr stringr tidyr]; }; - neonstore = derive2 { name="neonstore"; version="0.4.3"; sha256="0z6cj2adljwyym4n5s718zl8k2wlbbgq421zpkllj93vnchkjd2c"; depends=[DBI duckdb httr progress R_utils thor vroom zip]; }; + neonUtilities = derive2 { name="neonUtilities"; version="2.1.2"; sha256="0h3zfpjkfk68gxhxl2mh2lwgs5s61pg73sp6npq3yhp1r2g12w8a"; depends=[curl data_table downloader httr jsonlite pbapply R_utils stringr tidyr]; }; + neonstore = derive2 { name="neonstore"; version="0.4.4"; sha256="0fhjm6513kd4y3lry8dwcwk13ns92yk5h3san7ww2ahhdhy4hx9c"; depends=[DBI duckdb httr progress R_utils thor vroom zip]; }; neotoma = derive2 { name="neotoma"; version="1.7.4"; sha256="1fknzp7qg5l5lkfvqfld0x67zj3xmi8vivsg70m47mbpcs92hmcf"; depends=[analogue dplyr httr jsonlite leaflet plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; neptune = derive2 { name="neptune"; version="0.1.2"; sha256="1yk5w7520flprs7wvsdfmsdyg85snpcm7q9gjh3cx2fhaj5xvcl3"; depends=[reticulate]; }; nesRdata = derive2 { name="nesRdata"; version="0.3.1"; sha256="1lxvg11g8nizfn8sghirq2749fs9i4w1wiaz3v1djqbkzqcqfrcj"; depends=[dataone dplyr purrr rappdirs readr]; }; nestfs = derive2 { name="nestfs"; version="1.0"; sha256="0lzbjj287s5kmw9635gfyl3jdgfh5mxbwxqxmnwynbwccixk0akc"; depends=[dgof pROC]; }; nestr = derive2 { name="nestr"; version="0.1.1"; sha256="1azk3rjr9kkdqw1z5v49gmwd7i31jdmx332jpdnys6vwqci52zk0"; depends=[magrittr rlang tidyselect vctrs]; }; + net4pg = derive2 { name="net4pg"; version="0.1.0"; sha256="0aqagzrycgm6qnappbgi6pin10gnf9h3gj39wnncdsb2nf417ynr"; depends=[data_table graph magrittr Matrix]; }; netClust = derive2 { name="netClust"; version="1.0.1"; sha256="1h58ispdx8ddsnqrrmcxn2rbqb0hb89gpjg4p14mr7vhxw5c9zva"; depends=[Rcpp RcppArmadillo]; }; netCoin = derive2 { name="netCoin"; version="1.2.21"; sha256="15f75994z25c25kh6888b6nz2pcf3yg76f0iscz8bgp2jwcm7ym2"; depends=[haven igraph Matrix]; }; netSEM = derive2 { name="netSEM"; version="0.5.1"; sha256="0k4ngl4p1v2rp1sf2x65m7p0cd6ha98fyx21b73ki0531q0d9fil"; depends=[DiagrammeR DiagrammeRsvg gtools htmlwidgets knitr magrittr MASS png rsvg segmented svglite]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netchain = derive2 { name="netchain"; version="0.2.0"; sha256="1skpf1n6a17mjkcxqpl6vrskk04yvqa0v4n2zw9x5r1h46q9m6qk"; depends=[gtools igraph Matrix Rcpp stringr]; }; - netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; + netcom = derive2 { name="netcom"; version="2.1.5"; sha256="1lg2b3lhnhiqqb06b31vbsbfbk9hifbl5dvp45flf83vn3g21ci0"; depends=[clue doParallel dplyr expm foreach GenSA ggfortify ggplot2 ggraph igraph magrittr Matrix optimx pdist pracma reshape2 rlang tibble vegan]; }; netcontrol = derive2 { name="netcontrol"; version="0.1"; sha256="1gskb728ycnhz9a9g9ghm0dz3ajf3dzgyv23bsk9i01wj9hrxhc0"; depends=[expm MASS Matrix pracma Rcpp RcppArmadillo Rdpack]; }; - netdiffuseR = derive2 { name="netdiffuseR"; version="1.22.0"; sha256="1cmnrqsgxh391pm2jz4yg20hpsbhjrfx8w1qnydk5lyj44kzf4fc"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM viridisLite]; }; + netdiffuseR = derive2 { name="netdiffuseR"; version="1.22.3"; sha256="1vb3ql37fh5104ks65i03mz7ka1xk1rb8xnm2wxd654khkwjcp0m"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM viridisLite]; }; netgen = derive2 { name="netgen"; version="1.3.2"; sha256="1yqi4rb6w9ipxgbl1j1s2s81cg7nzrn65irn5gs82hsq94d6vv2j"; depends=[BBmisc checkmate ggplot2 igraph lhs mvtnorm stringr]; }; + netgsa = derive2 { name="netgsa"; version="4.0.1"; sha256="1j7j48snlkv3islwl4fab037d3h38ar5wsalr9jbxcng4bac8fqg"; depends=[AnnotationDbi corpcor data_table dplyr genefilter glassoFast glmnet graph graphite httr igraph jsonlite magrittr Matrix msigdbr ndexr org_Hs_eg_db quadprog Rcpp RcppEigen RCy3 reshape2 rlang]; }; netgwas = derive2 { name="netgwas"; version="1.13"; sha256="156axkl61z0s3zm8plkcc3s46x0881mqnk94azl3p0nphblhmhcv"; depends=[glasso huge igraph MASS Matrix qtl RBGL tmvtnorm]; }; netjack = derive2 { name="netjack"; version="1.2.0"; sha256="060ygb0kxi0gx1ya38cmf5hhyy6jkwq5519azdqhq5i324cwzzm7"; depends=[brainGraph ggplot2 igraph Rdpack]; }; - netmeta = derive2 { name="netmeta"; version="1.3-0"; sha256="1wkva1s9ambik22v1znhfl3srilri1rbsridwaa7a5mr9z233874"; depends=[ggplot2 magic MASS meta metafor]; }; + netmeta = derive2 { name="netmeta"; version="1.5-0"; sha256="1ha6gll3r1a1g6yyx2rxwsyc5zz82xw31nk0rhlrbrfr01nj3kd8"; depends=[ggplot2 magic MASS meta metafor]; }; netmhc2pan = derive2 { name="netmhc2pan"; version="1.3.1"; sha256="0q98rar7iglwxmf1274wrjcr7kp544ayrjhd286x68jmf51cqyrg"; depends=[assertive devtools dplyr rappdirs readr seqinr stringr testit tibble]; }; - netrankr = derive2 { name="netrankr"; version="0.3.0"; sha256="0siyvd4psr2mh1bd1gr33q569f814bfd8sbnkhvq50h6lj4n51p9"; depends=[igraph Rcpp RcppArmadillo]; }; + netplot = derive2 { name="netplot"; version="0.1-1"; sha256="11s6gcxcwbnd5x3sb4ryi4ks1bsbf7ylgc0yrygv58ipisxb2780"; depends=[igraph network sna]; }; + netrankr = derive2 { name="netrankr"; version="1.1.0"; sha256="0l0c843gsckd2kdk3vgvlx6mzw6g8nspijywv9h032ggdwzbag6n"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; netregR = derive2 { name="netregR"; version="1.0.1"; sha256="0n5absjra0imddz1spy1piij5rdz76wi4g568yby3rbhkm1896rs"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9.1"; sha256="00adkyd2hm8aynpnk4avzss8fxkbaai74n5cf03vpwyc306jq0d7"; depends=[igraph]; }; netseg = derive2 { name="netseg"; version="1.0-0"; sha256="0y7pc4dz78l6fi6z810bkzl7550vh4167axbnib55czgf7minhv6"; depends=[igraph]; }; netstat = derive2 { name="netstat"; version="0.1.1"; sha256="1h87cl3ry5hwwqxza3n24zpvwn89hhclsa2400sw4ijdy2ivpn2j"; depends=[]; }; - network = derive2 { name="network"; version="1.16.1"; sha256="1cgy7vlbinyndl0zkzvnpcmi240wry6iwfb42sz1mj5c9iwkar7b"; depends=[magrittr tibble]; }; + nettskjemar = derive2 { name="nettskjemar"; version="0.1.4"; sha256="0cghjk9hw3m0b6xalqg0p7v60jvshcfy6z5sfl4p2z6y17pkf72b"; depends=[dplyr here httr jsonlite pbapply purrr rvest tidyr usethis xml2]; }; + network = derive2 { name="network"; version="1.17.1"; sha256="19q563v5xfkbmr0ws9nhqx4wrxkf9jsck51rqc8mm2gq2h03lg7w"; depends=[magrittr statnet_common tibble]; }; networkABC = derive2 { name="networkABC"; version="0.8-0"; sha256="1vbabnkc8yvrxzrnaxj2v92620q1922hbcqbf1z3lmar5dbkql7f"; depends=[network RColorBrewer sna]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; - networkDynamic = derive2 { name="networkDynamic"; version="0.10.1"; sha256="183cnxbcly887vmxcvyvwcn19i8s7yyb57k1q5vhimx8vvcxivi2"; depends=[network statnet_common]; }; + networkDynamic = derive2 { name="networkDynamic"; version="0.11.0"; sha256="1lns4wnmkr0g4nnp9lbrzcgibvpm6rhgpbcligh24p77vjnwl8da"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; networkGen = derive2 { name="networkGen"; version="0.1.1"; sha256="1vnh5dajiaf47kx1sxyp744mlk3yvl4sxj380i3b3ic1wlgyd2h1"; depends=[igraph mgcv]; }; networkR = derive2 { name="networkR"; version="0.1.2"; sha256="07dq3syk0hr1kc2mqd70g0ih09hamd7rxxms60dyvnpm8978c1wz"; depends=[data_table fastmatch Matrix Rcpp RcppArmadillo]; }; networkTomography = derive2 { name="networkTomography"; version="0.3"; sha256="1hd7av231zz0d2f9ql5p6c95k7dj62hp0shdfshmyfjh8900amw7"; depends=[coda igraph KFAS limSolve plyr Rglpk]; }; networkreporting = derive2 { name="networkreporting"; version="0.1.1"; sha256="1ssbz8lw4mlwcblwfbyffvayvb2gmihq4qlz5q9222fn4aa3raxd"; depends=[dplyr functional ggplot2 lazyeval plyr reshape2 stringr surveybootstrap]; }; networksis = derive2 { name="networksis"; version="2.1-3"; sha256="1kvil3qs7xd94ak9jgvj1nss55gjg0y7d35zmass9h1hjkcrq7bg"; depends=[network]; }; - networktools = derive2 { name="networktools"; version="1.2.3"; sha256="0jj5cbp036vjjfj10i1lxzj4yi06xbdy1j20j6a035s8l2wc57pl"; depends=[cocor eigenmodel ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet psych qgraph R_utils RColorBrewer reshape2 smacof wordcloud]; }; + networktools = derive2 { name="networktools"; version="1.3.0"; sha256="1cff7b98zwx0v83mrwil6yd2yi9iklc6bi8569p2w32145gyqfnr"; depends=[cocor eigenmodel ggplot2 gridExtra igraph IsingFit NetworkComparisonTest nnet psych qgraph R_utils RColorBrewer reshape2 smacof wordcloud]; }; networktree = derive2 { name="networktree"; version="1.0.1"; sha256="0hkrqpx7b6sxalw1qyrncck70mx6p5gr57mf558l5mlqi52v7hg0"; depends=[Formula gridBase Matrix mvtnorm partykit qgraph reshape2]; }; neuRosim = derive2 { name="neuRosim"; version="0.2-12"; sha256="1hsnw9xipdr74fydq9013252ycbi9igh28s0j4dbdx52pv3iixzl"; depends=[deSolve]; }; neural = derive2 { name="neural"; version="1.4.2.2"; sha256="05hrqgppgwp38rdzw86naglxj0bz3wqv04akq7f0jxbbjc6kwy4j"; depends=[]; }; @@ -12304,24 +12813,27 @@ in with self; { neurohcp = derive2 { name="neurohcp"; version="0.9.0"; sha256="02z0lhmw2mr2fk8d8wp7nfcrfl8izds68zskm5j0xfabfb4dwkbx"; depends=[aws_s3 base64enc digest httr xml2]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; neuromplex = derive2 { name="neuromplex"; version="1.0-1"; sha256="1zj7x528qv4bp24fx546jj9kf0q0n26jyi65v6h2bl3c61rrb6bz"; depends=[BayesLogit dplyr ggplot2 gridExtra magrittr tidyr]; }; + neuronorm = derive2 { name="neuronorm"; version="1.0.0"; sha256="01j8bzs8jbklsjm9krsv5jkfaardhq5apfgr5bc11ry9xbwzz3b0"; depends=[fslr knitr neurobase oro_nifti]; }; neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.3"; sha256="1660v7nng6dj9gwn04ynirms0g10wpsz33i26va229zdviqm5cyy"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; - neverhpfilter = derive2 { name="neverhpfilter"; version="0.3-1"; sha256="1x2sc9v40hrlg60v3887a680359zdql9c7n8y97dh7v8w7mw547x"; depends=[xts zoo]; }; - newFocus = derive2 { name="newFocus"; version="1.0"; sha256="067g6b25wz1awp0fdqyh8s53q0vmypfax08s5pz5i59wb9k8pgzs"; depends=[ctgt]; }; + nevada = derive2 { name="nevada"; version="0.1.0"; sha256="0z1wi3769204cgi6hk13nnm6z6nx3dlx334mbs13r7p5rhmf794g"; depends=[cli dplyr flipr forcats ggplot2 igraph magrittr purrr Rcpp RcppArmadillo rlang tibble tidyr withr]; }; + neverhpfilter = derive2 { name="neverhpfilter"; version="0.4-0"; sha256="097nfz30pf4bd95l943ccsvndni0n8c6gpcdk5dv02802mcg0h81"; depends=[xts zoo]; }; + newFocus = derive2 { name="newFocus"; version="1.1"; sha256="0j7wl4yf4dnz4vbbnhsk39w9zqbnad2lhxwqbns1plhdd02hzsfr"; depends=[ctgt]; }; newTestSurvRec = derive2 { name="newTestSurvRec"; version="1.0.2"; sha256="06p782md33wqh5wa1735yg5i01d42p74kl7h5qhqs9cd732ls6pz"; depends=[]; }; newsanchor = derive2 { name="newsanchor"; version="0.1.1"; sha256="1s8qhq9jk5gnsimnvy7kdayya0ks0ly309l7zxm5rafj5x7k5vwn"; depends=[askpass devtools httr jsonlite lubridate tidyr xml2]; }; newscatcheR = derive2 { name="newscatcheR"; version="0.1.0"; sha256="0rm91dfzfjhi51gk65gvq2z7aywg6y8ay3hrjnp6frlmyvh661sp"; depends=[tidyRSS]; }; - newsmap = derive2 { name="newsmap"; version="0.7.3"; sha256="0189vw51sdz981fy3k7rns61imgil3vcjyrw3bhr5lyqp00zaicf"; depends=[Matrix quanteda quanteda_textstats stringi]; }; + newsmap = derive2 { name="newsmap"; version="0.7.4"; sha256="1k7jbfz3hrpy8z3zfn0gcm9fzmfiaf3qkx1m89c5q072zpdpiajn"; depends=[Matrix quanteda quanteda_textstats stringi]; }; newsmd = derive2 { name="newsmd"; version="0.3.1"; sha256="0xgrxz0ppvja4avff2l4kjnbw90ynbrziih0iqfjsvnvy92msalg"; depends=[R6]; }; nfl4th = derive2 { name="nfl4th"; version="1.0.0"; sha256="027n3wbavm4h6nsy2qjlyq2ga11mk0rvxpn6m2x1hcg291gsib9g"; depends=[dplyr glue httr janitor jsonlite magrittr mgcv nflfastR purrr stringr tibble tidyr tidyselect xgboost]; }; - nflfastR = derive2 { name="nflfastR"; version="4.1.0"; sha256="1a4f55nxah7sf5zlsgfvh6xj385icy707a6h7s3hpsc776m2bd1l"; depends=[cli curl dplyr fastrmodels furrr future glue janitor lifecycle lubridate magrittr mgcv progressr rlang stringr tibble tidyr tidyselect usethis xgboost]; }; + nflfastR = derive2 { name="nflfastR"; version="4.2.0"; sha256="1z4v5akap56kdpjmz70rqy53mfqc8bkvnwqnns751fh6k040mq8l"; depends=[cli curl dplyr fastrmodels furrr future glue janitor lifecycle lubridate magrittr mgcv progressr rlang stringr tibble tidyr tidyselect xgboost]; }; + nflreadr = derive2 { name="nflreadr"; version="1.1.0"; sha256="146kbykw7fsgn54hsbbasm14phbhcwr4y8qnpg8lyv2m08fj7m01"; depends=[cachem curl data_table memoise qs rappdirs rlang]; }; nflseedR = derive2 { name="nflseedR"; version="1.0.2"; sha256="061jd3mr06mxs5riwlph3a1hsk5jypws71jy9jzhhqnijdy96bki"; depends=[cli crayon curl dplyr furrr future glue gsubfn magrittr progressr purrr readr rlang tibble tidyr]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; - ngramr = derive2 { name="ngramr"; version="1.7.2"; sha256="10jm8gjr2fjyr1xvgn6g5w2l7p7xn33jgvy53hhkdlhksfsmlfis"; depends=[cli dplyr ggplot2 httr lifecycle RCurl rjson rlang scales stringr textutils tibble tidyr xml2]; }; + ngramr = derive2 { name="ngramr"; version="1.7.4"; sha256="11v7vl55bfh9fqdkggpxykglyjqdcnl53if0vki8al67qfwsh9i7"; depends=[cli dplyr ggplot2 httr lifecycle RCurl rjson rlang scales stringr textutils tibble tidyr xml2]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; ngspatial = derive2 { name="ngspatial"; version="1.2-2"; sha256="09hdvmbna4m62zv18k5kj9718wzw7p43wnal2j6aa0m5sd2rx9rz"; depends=[batchmeans Rcpp RcppArmadillo]; }; nhanesA = derive2 { name="nhanesA"; version="0.6.5.3"; sha256="00sfbzh7r2lvc19prjm3zfgs62j6frh5rw6jvb25z8wzrhw52z3f"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; - nhdR = derive2 { name="nhdR"; version="0.5.4"; sha256="0fi9bl53j2qvd0y7m6fqcks69wv8d812p3rdpzpzi12p9iiw8j7r"; depends=[curl dplyr foreign gdalUtils ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; - nhdplusTools = derive2 { name="nhdplusTools"; version="0.4.0"; sha256="1i3kraai4byy17v60a4v29x7fwq0yxljsk2wd4sbh7b29i9v2vha"; depends=[dataRetrieval dplyr fst httr igraph jsonlite magrittr prettymapr R_utils RANN rappdirs rosm sf tidyr units xml2 zip]; }; + nhdR = derive2 { name="nhdR"; version="0.5.6"; sha256="0q3j684j2x87m8k7yialzrs7bvwzb03j6qma6i7r7si2y4jy5d8c"; depends=[curl dplyr foreign ggplot2 httr maps memoise purrr rappdirs rgdal rlang rvest sf stringr units xml2]; }; + nhdplusTools = derive2 { name="nhdplusTools"; version="0.4.3"; sha256="01462pmvmy8j3p5l9qdd6xdn1jv7gi9m1vn9mbcn0gmdkll888vd"; depends=[dataRetrieval dplyr fst httr igraph jsonlite magrittr pbapply prettymapr R_utils RANN rosm sf tidyr units xml2 zip]; }; nhlapi = derive2 { name="nhlapi"; version="0.1.4"; sha256="1c5s7fd9agzk20xi8v38dk8ih6lmn8c90mxncyr996bhipgr7vl3"; depends=[jsonlite]; }; nhlscrape = derive2 { name="nhlscrape"; version="0.1.3"; sha256="0x6y747j6lha3jw4v2wavgd12xw5nx4m8biv9rmq9z0qy53vncjc"; depends=[DBI httr jsonlite RSQLite rvest xml2]; }; nhm = derive2 { name="nhm"; version="0.1.0"; sha256="1yf9hnbmfb7xj8mbhnq40wvd0pd88x9qspy1jr3x0n8nb75i3jlp"; depends=[deSolve maxLik mvtnorm]; }; @@ -12329,82 +12841,84 @@ in with self; { nhsnumber = derive2 { name="nhsnumber"; version="0.1.1"; sha256="1dprhla2wwpgapsrmzjfr131gjpxl0nqri4qibaij0ndpqyfzxmg"; depends=[]; }; nhstplot = derive2 { name="nhstplot"; version="1.1.0"; sha256="1yk7q731a4y9mhngdsb8xdw2id6m1q78329ja19hdpi6nnd7nhgn"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; - nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; + nicheROVER = derive2 { name="nicheROVER"; version="1.1.0"; sha256="0chg2bnz929mq17qylf3f57g6bg4ih6w20019yh7vkz7mwjnvi3p"; depends=[]; }; nichevol = derive2 { name="nichevol"; version="0.1.19"; sha256="0qj5cb0fyw0x1bczl6l0kl6jqir4yg8sb9fsfkd3h64d0ls2arl5"; depends=[ape castor concaveman geiger raster rgdal rgeos sf sp stringr]; }; + nifti_io = derive2 { name="nifti.io"; version="1.0.0"; sha256="03p0gn6id5bkn0qxf7v3splykpi9wpbasrhf2937gp25bsynrpjm"; depends=[]; }; nightmares = derive2 { name="nightmares"; version="0.0.2"; sha256="1dmqrb17ncwazy1nb0zzfy7fq51ah7rz0xmhmmx6d30paaix2vc7"; depends=[raster rgdal sp]; }; nilde = derive2 { name="nilde"; version="1.1-4"; sha256="1zw952sqqxcxniyi7s0901xzqqpxqxdbisab9f3rv1i3kikcaa60"; depends=[]; }; nima = derive2 { name="nima"; version="0.6.2"; sha256="0n8r8h1m0v0ssbpv6p32jby49f45qbicwr0awm7x054p48qk49cy"; depends=[assertthat dplyr ggplot2 ggthemes gridExtra gtools scales]; }; - nimble = derive2 { name="nimble"; version="0.11.0"; sha256="03ryxc7yaf3vaghzrb1fnjgsrmwjfxhxza0m4k976qz3hhh0hmds"; depends=[coda igraph R6]; }; + nimble = derive2 { name="nimble"; version="0.11.1"; sha256="1f2zz3975ymvkfv55699alygfgib51grdym141kpwqs10cj3iiry"; depends=[coda igraph R6]; }; + nimbleCarbon = derive2 { name="nimbleCarbon"; version="0.1.2"; sha256="1cj1yik4knxniag12qr8hqxkqhcm5lhq8xw7g8iibv3rxq0jvkki"; depends=[coda doSNOW foreach nimble rcarbon snow]; }; nimbleEcology = derive2 { name="nimbleEcology"; version="0.4.0"; sha256="1qpwjzxgcmfqfp2ccjkngvjymqsyxvhvcs43vvynx30xgrj3nzdm"; depends=[nimble]; }; - nimbleSCR = derive2 { name="nimbleSCR"; version="0.1.1"; sha256="0bkq6ds9qyqf8s4r7cfvi02r9vh10jiqrgrsanyadwni1bzm94jj"; depends=[nimble]; }; + nimbleSCR = derive2 { name="nimbleSCR"; version="0.1.2"; sha256="0212aj3d760dnb04xlwh3zsf1mkv58lmlql8zp7mm7sgx12qg8yh"; depends=[nimble]; }; nimbleSMC = derive2 { name="nimbleSMC"; version="0.10.0"; sha256="15abjhgq8mi8c079hfzwjyl5glchx606hciq2lsirkrbyvc7b23n"; depends=[nimble]; }; - nipals = derive2 { name="nipals"; version="0.7"; sha256="14rq54qy4gc4l9f5h48vrsrh7sb0wzzxbvjn0zax82pz2fw6nybx"; depends=[]; }; + nipals = derive2 { name="nipals"; version="0.8"; sha256="0nv7h68hysxnpiinmgw6v3bz4ya53c0p96k9bfvcmalfb7hs8j5z"; depends=[]; }; nipnTK = derive2 { name="nipnTK"; version="0.1.0"; sha256="0imy2x1h9d842ssw7hmmh21c4mj7s6y05mmjin1270skbnrk2zmr"; depends=[bbw withr]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; nixmass = derive2 { name="nixmass"; version="1.0.2"; sha256="0g8hm0mnbwahbnk44rfciiggxn5bscfni5gqc6y3za496cf9wlk1"; depends=[lubridate zoo]; }; - njtr1 = derive2 { name="njtr1"; version="0.2.0"; sha256="1lwraf77gczf627cy1d8sl0qk05p91b6qib5i5x4486ln00hs6mn"; depends=[curl httr lubridate]; }; + njtr1 = derive2 { name="njtr1"; version="0.3.1"; sha256="125c5qp2d4q2h4darhx2acqk898kh5775rxjyfjidl0nxhvcvn4q"; depends=[curl dplyr httr lubridate readr stringr tidyselect]; }; nlMS = derive2 { name="nlMS"; version="1.1"; sha256="01ijg1bp3r0dg8ph7qpsx3hqzrrvfhbykml20hqchxk7c5n2w9wz"; depends=[nlme]; }; nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; nlaR = derive2 { name="nlaR"; version="0.4.0"; sha256="05ipw2j4w5r3bpmhqh742yqz5qihx36jnsq08bli8jwsqha9vm8h"; depends=[rappdirs]; }; nlcv = derive2 { name="nlcv"; version="0.3.5"; sha256="1ywnm8a13ifqa1bxnf659h1j6mg9iy02vaszyh9p966ps9c1pjab"; depends=[a4Core Biobase e1071 ipred kernlab limma MASS MLInterfaces multtest pamr randomForest RColorBrewer ROCR xtable]; }; nleqslv = derive2 { name="nleqslv"; version="3.3.2"; sha256="1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"; depends=[]; }; - nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; - nlist = derive2 { name="nlist"; version="0.3.1"; sha256="0fbhnm0jldx0xp44fh93ys5084kz4h32vfkp8kzk17fd42pm358z"; depends=[abind chk coda extras generics lifecycle purrr term tibble universals]; }; - nlme = derive2 { name="nlme"; version="3.1-152"; sha256="0pji9vvmjqyk8b7lhxsixnagsrz2hmnwy6ilc2gg5ji1y6qx2rav"; depends=[lattice]; }; + nlist = derive2 { name="nlist"; version="0.3.3"; sha256="1wq7bp834c7cl37wbrgd9ars3mm0s5c3l3fxlrry728a27c27f9h"; depends=[abind chk coda extras generics lifecycle purrr term tibble universals]; }; + nlme = derive2 { name="nlme"; version="3.1-153"; sha256="1qw0sq64iybyidj0s8m76z4i1gxb1fn27s29i63fw5hvvy7aj9rx"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; - nlmixr = derive2 { name="nlmixr"; version="2.0.4"; sha256="1gw2xm7nn0sjwk5m5l56x4kasndr52ymmryvaqxwci5x69s9b48l"; depends=[backports BH brew dparser fastGHQuad ggplot2 lbfgsb3c magrittr Matrix minqa n1qn1 nlme Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders symengine]; }; + nlmixr = derive2 { name="nlmixr"; version="2.0.5"; sha256="1zx900il7vp0d26npd0fy5zny9f7484i6bwh3030drbqcsr34aqh"; depends=[backports BH brew dparser fastGHQuad ggplot2 lbfgsb3c magrittr Matrix minqa n1qn1 nlme Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders symengine]; }; nlmm = derive2 { name="nlmm"; version="1.0.1"; sha256="0q5vz4xqdb510i26zbcq4djcribn7h477akh8f56nzjgq231vhcq"; depends=[BH HI lqmm MASS Matrix mvtnorm nlme numDeriv Qtools Rcpp RcppArmadillo statmod]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; nlnet = derive2 { name="nlnet"; version="1.4"; sha256="13lv4b6chsjrhimny3wc1y9ljgbxmm1byj4j04n4vj8icn87gyfd"; depends=[coin e1071 earth fdrtool igraph randomForest ROCR TSP]; }; nloptr = derive2 { name="nloptr"; version="1.2.2.2"; sha256="0whkilb85k4wixvr3k7rygfw1rcs1fs9h8c18kz4p3y1k9hsj3p8"; depends=[]; }; nlpred = derive2 { name="nlpred"; version="1.0.1"; sha256="05jna8hzd5v36a0dwag6zr8ms1pkryas3qarwb946bkxlslffp27"; depends=[assertthat bde cvAUC data_table np Rdpack ROCR SuperLearner]; }; - nlraa = derive2 { name="nlraa"; version="0.89"; sha256="19gvii7ajh1nsv4f3xqqmld35glz422v0ippcxypm2m4jbmp7mag"; depends=[boot knitr MASS Matrix mgcv nlme]; }; + nlraa = derive2 { name="nlraa"; version="0.98"; sha256="1vihk6k8582iwwn2gzpbs1amg8wbvpiar4diljvjx75172lc1s0h"; depends=[boot knitr MASS Matrix mgcv nlme]; }; nlreg = derive2 { name="nlreg"; version="1.2-2.2"; sha256="0gkcxg5m287axhvkl00xy26vidawhhb1ii1s13rh49v0yccwvvqh"; depends=[statmod survival]; }; nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; - nlrx = derive2 { name="nlrx"; version="0.4.2"; sha256="1knaf7ba8r8va0i8w1r3qqrzvc1zb42sv7j5hbk2jraydbxpbmd6"; depends=[crayon dplyr EasyABC furrr genalg GenSA igraph lhs magrittr progressr purrr raster readr rstudioapi sensitivity sf stringr tibble tidyr XML]; }; + nlrx = derive2 { name="nlrx"; version="0.4.3"; sha256="1w788fs9zkcbg99csiynd6cw9p8na2g5sg85065d17l6wxmxk7va"; depends=[crayon dplyr EasyABC furrr genalg GenSA igraph lhs magrittr progressr purrr raster readr rstudioapi sensitivity sf stringr tibble tidyr XML]; }; nls_multstart = derive2 { name="nls.multstart"; version="1.2.0"; sha256="1aichzwg54jhw1y3csv2bx40cszbgzfa60hr17jb5133nxb99gwh"; depends=[dplyr minpack_lm purrr tibble tidyr]; }; nls2 = derive2 { name="nls2"; version="0.2"; sha256="0k46i865p6jk0jchy03jiq131pc20h9crn3hygzy305rdnqvaccq"; depends=[proto]; }; - nlsMicrobio = derive2 { name="nlsMicrobio"; version="0.0-1"; sha256="0676n78265z00dacmq593c9l2239ii574djm9s7i7w8jk1kdhzx2"; depends=[nlstools]; }; + nlsMicrobio = derive2 { name="nlsMicrobio"; version="0.0-3"; sha256="0vn0yv1h8idv91g7qhx8qfyvsvw4rbx7i8r8kfv13d40j1w4cfab"; depends=[nlstools]; }; nlsem = derive2 { name="nlsem"; version="0.8"; sha256="0q3wk7x67mh2447ah807djyklia2x2d45krsskffynazm83msnj9"; depends=[gaussquad lavaan mvtnorm nlme orthopolynom]; }; nlshelper = derive2 { name="nlshelper"; version="0.2"; sha256="02xnx0j8p1im1hdwnia3n51dicscjf8s33y475i3dczvhmivvbmf"; depends=[broom dplyr magicaxis mgcv nlme]; }; nlshrink = derive2 { name="nlshrink"; version="1.0.1"; sha256="0adnr7g3n3brwlvyix8wa7h59gj036l5anv8abqy80ysmfcmsp0y"; depends=[MASS nloptr]; }; nlsmsn = derive2 { name="nlsmsn"; version="0.0-6"; sha256="1wrqfmsb3l4bsdncyjl7hh3vwj9s6l43p7klww6f4k21asvh4p5s"; depends=[]; }; - nlsr = derive2 { name="nlsr"; version="2019.9.7"; sha256="1zhfnv09khd2k236jzka9znc0nlps452gwl7db0grb0ylfyxbqg4"; depends=[digest]; }; + nlsr = derive2 { name="nlsr"; version="2021.8.19"; sha256="021brwb73gg2c3ingrdk81dm4mx0g2s2k8nk2qcz3zqmd0gzadn6"; depends=[digest]; }; nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; }; nlstac = derive2 { name="nlstac"; version="0.1.0"; sha256="0ag9zzzcadgwa43j16ff30r7g8jfihkwi76shv43igp52a11jr72"; depends=[Deriv doParallel foreach stringr]; }; - nlstimedist = derive2 { name="nlstimedist"; version="2.0.0"; sha256="0mlg8b6qg3yas828wsjbnwj2dksvsq6pdkyzh31r9mjkj9a4vvrf"; depends=[ggplot2 minpack_lm nlstools poorman]; }; - nlstools = derive2 { name="nlstools"; version="1.0-2"; sha256="0mjn1j9fqqgr3qgdr0ki4lfbd0yrkanvya4y2483q3wklqa6qvjc"; depends=[]; }; + nlstools = derive2 { name="nlstools"; version="2.0-0"; sha256="07givljg4ynp56613bnyh5a6cf41h6ihsrwp073zwnxr0l9c5gqf"; depends=[]; }; nlt = derive2 { name="nlt"; version="2.2-1"; sha256="10wf00qzf28dxjfvv12wsqxlfn6xz15wk8njrzgsgm9px1g6s21f"; depends=[adlift EbayesThresh]; }; nltm = derive2 { name="nltm"; version="1.4.2"; sha256="02f3rn5l1hfvjpymy7vljmh6iq9w1w96016kx75qw563zwhmp5kx"; depends=[survival]; }; nlts = derive2 { name="nlts"; version="1.0-2"; sha256="0s49qjwavl9ns2746nn4zy4h4dh0njfcvznm3qd61qhs7np9w1db"; depends=[acepack locfit]; }; - nmaINLA = derive2 { name="nmaINLA"; version="1.0.0"; sha256="0m32yy1v1vq0zwl55q2lijjh38g7512fm1d3y8rzh3yvc0y7rr4c"; depends=[]; }; + nmaINLA = derive2 { name="nmaINLA"; version="1.1.0"; sha256="1qjb5n1qr89rv2a5ay2p74cs3i6swkn8wllklgn57fnahb9pcrgi"; depends=[]; }; nmadb = derive2 { name="nmadb"; version="1.2.0"; sha256="17r5vc57ilhy6cfcqpfyp9nzzjaa5gc8qkgfn3y8sppqh1g1mi40"; depends=[devtools jsonlite RCurl readxl]; }; - nmaplateplot = derive2 { name="nmaplateplot"; version="1.0.0"; sha256="00cs2c5qryd04y5qc0fb3pmv6fz017jvp3cbxacjy1rl93iyfpwh"; depends=[ggplot2]; }; + nmaplateplot = derive2 { name="nmaplateplot"; version="1.0.1"; sha256="1k6i4d1n2cadhp1nzb7ij1d58wrgyhrqpwq1flixgkyrzz375z9g"; depends=[ggplot2]; }; + nmarank = derive2 { name="nmarank"; version="0.2-3"; sha256="01qp4ypxx5i112mnc6w76zysdla6sjcv77gazx655vq2pmb61wm2"; depends=[data_tree dplyr meta mvtnorm netmeta rlang tibble tidyr]; }; nmathresh = derive2 { name="nmathresh"; version="0.1.6"; sha256="1jrf7k7an5y867k40aj28ib7vrjyqky2cslwzmfx28snp8ns1vd3"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmixgof = derive2 { name="nmixgof"; version="0.1.0"; sha256="0cbwrsxrcf8pn4ycn6r0z8jdidw5l6kdvwyrks69fq4pjzx988d6"; depends=[Rcpp unmarked]; }; nmm = derive2 { name="nmm"; version="0.9"; sha256="00qij3vfpld6dzs6nzc43k1skxn8imdy41l4m42584fflwd1sfhj"; depends=[abind AER data_table DEoptim dplyr gsubfn Hmisc magrittr maxLik mlogit plyr Rdpack systemfit tidyr]; }; - nmslibR = derive2 { name="nmslibR"; version="1.0.4"; sha256="1fw565n4128nswl2qx248ab60is98iqijq5blwskxc9hjddf95a4"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; + nmslibR = derive2 { name="nmslibR"; version="1.0.6"; sha256="1biaaifcnzjpj6prq04avgfz29n1v65kgpir8jrg4ndb6krjwh94"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; nnGarrote = derive2 { name="nnGarrote"; version="1.0.3"; sha256="0icnlqi6859q28gw7l7n75nlfkrf8cbxxn8lq031614hvvhgjs9k"; depends=[caret glmnet multicool]; }; - nnTensor = derive2 { name="nnTensor"; version="1.0.5"; sha256="1zcf5ihggmhqcdnwbsqg5bxr86yyivy6zgqvfwg1jvpygk2bfqy0"; depends=[fields ggplot2 plot3D rTensor tagcloud]; }; + nnTensor = derive2 { name="nnTensor"; version="1.1.5"; sha256="0sxmx34xb0fk5fcynry1vrfk7jr2w6kyjyghlqg8j94rn4hamjsb"; depends=[fields ggplot2 plot3D rTensor tagcloud]; }; nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; nnet = derive2 { name="nnet"; version="7.3-16"; sha256="0smmyx4vhlz99vy4w238y913gq74845v0l1p0g1kgydsp9lijlcr"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnfor = derive2 { name="nnfor"; version="0.9.6"; sha256="0bciy6k79g7abvj3pmmdc4wzg5mp11zgmdbx17x4by993p2clhw9"; depends=[forecast glmnet MASS neuralnet plotrix tsutils uroot]; }; - nngeo = derive2 { name="nngeo"; version="0.4.2"; sha256="05gbi1bhgcigr58f6sy8nj8ka7fzdajhs7i1jknrmp0v1jxjlbrd"; depends=[lwgeom nabor s2 sf units]; }; + nngeo = derive2 { name="nngeo"; version="0.4.4"; sha256="0k189ih47n20g70y6sxff8dyjlyv09pc03ynwhm1d7pr3l8hxin4"; depends=[data_table lwgeom nabor s2 sf units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; - nnlib2Rcpp = derive2 { name="nnlib2Rcpp"; version="0.1.6"; sha256="0pm1y5crjyy251710vajbj50a0x3xng9yljn202sisidi7df1q2a"; depends=[Rcpp]; }; + nnlib2Rcpp = derive2 { name="nnlib2Rcpp"; version="0.1.7"; sha256="18lrbmxbazrwr50s0ci2zp3y8g50gwhlp1c7y0iz2vxc5f2j4m88"; depends=[Rcpp]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; + nnspat = derive2 { name="nnspat"; version="0.1.0"; sha256="01c0spr3i76n1ffhpp5qigmcbsqbscv6hzrrn3kgz0v5wr7j6ss2"; depends=[MASS Rdpack]; }; nnt = derive2 { name="nnt"; version="0.1.4"; sha256="1rrqq8m3plsq13hsh53h948wbx37gl87hplj4ms2pxxf1zwqsmnj"; depends=[survival survRM2]; }; nntrf = derive2 { name="nntrf"; version="0.1.4"; sha256="1kasj861ln5q93wna1pk6sbjsssy3vpfzvk8jxd0drb17x3brpx8"; depends=[FNN NeuralNetTools nnet pracma]; }; noaaoceans = derive2 { name="noaaoceans"; version="0.3.0"; sha256="0pxsddzkrprzjch173shhmd7c2h6rh5xzs3n5bbs97l51ni8m60m"; depends=[httr jsonlite rvest xml2]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.2.0"; sha256="1d93h8av0bbv7a56g6m000qpsnzqpfdla0fmcj5y8fbbqkipxnfr"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 hurricaneexposure lubridate magrittr maps plyr RColorBrewer RCurl rlang stringr tibble tidyr viridis XML]; }; noah = derive2 { name="noah"; version="0.1.0"; sha256="1ln23lp4c70fin9sjjhm4ngy47f8sk2mcljp5q449b7hq8gqi12c"; depends=[assertthat crayon digest dplyr hash magrittr purrr R6 rlang stringr]; }; - noctua = derive2 { name="noctua"; version="2.0.1"; sha256="01xw3as0lg2z16x9jb4vldwp1jqfqbdmb2khyi7s5agai9lbiz1d"; depends=[data_table DBI paws uuid]; }; - nodbi = derive2 { name="nodbi"; version="0.4.2"; sha256="0akaml8liwmq5g57rf11ljckjv4hf3jaaknarkjrnilhi1zs0iy2"; depends=[data_table jsonlite]; }; + noctua = derive2 { name="noctua"; version="2.2.0"; sha256="0150i8rh4aw9bj6s5ysj7jg162fawi6zyq5kgj1lbnifmlk2nbz4"; depends=[data_table DBI paws uuid]; }; + nodbi = derive2 { name="nodbi"; version="0.4.3"; sha256="03vb11iryhx18jdj4sbmh50l9h39pkzdp9d33117pbfvr61pzx32"; depends=[data_table jsonlite]; }; node2vec = derive2 { name="node2vec"; version="0.1.0"; sha256="03gfpn4xgmdwlrpwi9pdpnh6k75mwp85j6vywkj0jsxhz3rbg95g"; depends=[data_table dplyr igraph rlist vctrs vegan word2vec]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.4.0"; sha256="1k7pr9d1mgxw3szxcmnkkz498x7629wf2z65qlclywka3xgzpkxc"; depends=[ape picante raster sp vegan]; }; @@ -12415,16 +12929,18 @@ in with self; { noisySBM = derive2 { name="noisySBM"; version="0.1.4"; sha256="1zdkxr48kvpqs49figxxznq3d45nalja92lyal71m066s1blc6dg"; depends=[ggplot2 gtools RColorBrewer]; }; noisyr = derive2 { name="noisyr"; version="1.0.0"; sha256="05nvxz5qa4lsi62va74yq4m68nlacjkl8xj5nsq7dik3357y53dr"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 IRanges magrittr philentropy preprocessCore Rsamtools tibble]; }; nombre = derive2 { name="nombre"; version="0.3.0"; sha256="0ssi0xk3f327zs7zvyhcm20v537y6ikjnfjarjsz22dvn05dblma"; depends=[fracture pkgconfig]; }; - nomclust = derive2 { name="nomclust"; version="2.2.1"; sha256="1034j5y7dppm4xkap1h3ywl77fz3dsm3g15njjgzcszr3p0z4vxn"; depends=[cluster plyr]; }; + nomclust = derive2 { name="nomclust"; version="2.5.0"; sha256="17vqxbx5bpja2fxp83w0sbgbs61b2vaak9zzvvxkicxqwk09ix2v"; depends=[cluster Rcpp]; }; + nominatimlite = derive2 { name="nominatimlite"; version="0.1.0"; sha256="0ap4jczxvmhgn54k4yqm73rxcawc0rbac77ni79l9kvgg9c7bk4l"; depends=[dplyr jsonlite sf tibble]; }; nomisr = derive2 { name="nomisr"; version="0.4.4"; sha256="1qa7k4fh7n2imf91nfcdg32dacraay343jv9sczs6qc37nadhdbg"; depends=[dplyr httr jsonlite readr rlang rsdmx snakecase tibble]; }; nomnoml = derive2 { name="nomnoml"; version="0.2.3"; sha256="08zraip0v4jc51zv2zsvka6k8d1ry2ac9d70xpavfggbgmrmz987"; depends=[htmlwidgets lifecycle png rlang webshot]; }; nomogramEx = derive2 { name="nomogramEx"; version="3.0"; sha256="16235rwblnzn8k53817llwy2pzhnpifh6ij159nxymjm8ar9qpbp"; depends=[pracma rms]; }; nomogramFormula = derive2 { name="nomogramFormula"; version="1.2.0.0"; sha256="1j6g5kndl0n2g8acwq8pn09sk0bjcsphbcd77ha1j5dnwdmy73c0"; depends=[do Hmisc rms]; }; + nomordR = derive2 { name="nomordR"; version="0.1"; sha256="02d5gk5pd4vpd61ys9x81maxjrmbshx1wdv6xxsvafrnz7a7pmks"; depends=[]; }; noncompliance = derive2 { name="noncompliance"; version="0.2.2"; sha256="1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6"; depends=[data_table Rcpp]; }; noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonet = derive2 { name="nonet"; version="0.4.0"; sha256="1043vplj8libbzll172h82dfwnz2lsdba5na2g9liryg8p08h4v8"; depends=[caret dplyr e1071 ggplot2 glmnet pROC purrr randomForest rlang rlist tidyverse]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; - nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.10"; sha256="1zhp06az5pz7133253h18wwy77vpky4g0gi636v42p9dh0dzzvbm"; depends=[Matrix Rcpp RcppArmadillo rgl tseries zoo]; }; + nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.11"; sha256="0p7lf6zs8wicfsh85wrbgngqa6a9dfkajz82ng98s2n6y0bdrxhs"; depends=[lifecycle Matrix Rcpp RcppArmadillo tseries zoo]; }; nonmem2R = derive2 { name="nonmem2R"; version="0.2.3"; sha256="1x8mq0wwzn3px41pjbzwmpd8wjfq581lwq4nkiva7pf1xzjpk923"; depends=[ggplot2 gridExtra lattice latticeExtra MASS mvtnorm reshape2 splines2]; }; nonmemica = derive2 { name="nonmemica"; version="0.9.7"; sha256="12760lvbifzakzq7wjzqavqicrp2pzyq333glmafm9v73lx97pa7"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; nonneg_cg = derive2 { name="nonneg.cg"; version="0.1.6"; sha256="15361k0kjy1465s8pr9jb5jy22mibi37zcnza7mbfh5l66hr29kh"; depends=[Rcpp]; }; @@ -12446,17 +12962,17 @@ in with self; { normwhn_test = derive2 { name="normwhn.test"; version="1.0"; sha256="1kr45bfydk40hgdg24i2f28cdaw65hg9gmsgv4lsvvr2m3r74vi6"; depends=[]; }; nortest = derive2 { name="nortest"; version="1.0-4"; sha256="17r0wpz72z9312c70nwi1i1kp1v9fm1h6jg7q5cx1mc1h420m1d3"; depends=[]; }; nortestARMA = derive2 { name="nortestARMA"; version="1.0.2"; sha256="11ala9z0snsbn1xmj9yzs4kyh9js1w19x0dnnmh5cbr9bi7aag50"; depends=[astsa]; }; - nortsTest = derive2 { name="nortsTest"; version="1.0.0"; sha256="15s7shl7gxhfyi5qc86wbwggkk3axhglbc15ba1wk8r40fwhjv2s"; depends=[forecast ggplot2 gridExtra MASS nortest tseries uroot zoo]; }; + nortsTest = derive2 { name="nortsTest"; version="1.0.3"; sha256="0wn4xljczy4z9j95mxisi7gyn2j262zzhp2skz4wj8c5kxj1pc6g"; depends=[forecast ggplot2 gridExtra MASS nortest tseries uroot zoo]; }; nos = derive2 { name="nos"; version="1.1.0"; sha256="0hbncama8cx8q0rc56bil38fbj33z49v4d6zdkvxs6wgmmglnrfs"; depends=[dplyr gmp]; }; nose = derive2 { name="nose"; version="1.0"; sha256="17l78vmfqc22inq6zaqpnk2m91wp0nfjbbwfcpfqykf8lk9ipqna"; depends=[]; }; - nosoi = derive2 { name="nosoi"; version="1.0.3"; sha256="0mz36r44s9l8qsiwvq0v3kd3czj1mngasq93bn9x1whbfqq590fk"; depends=[data_table raster]; }; + nosoi = derive2 { name="nosoi"; version="1.1.0"; sha256="1b7csrgax5ig9ibiwbhh2cl357hvdc6my4408vld498c8jjf0lyw"; depends=[data_table raster]; }; not = derive2 { name="not"; version="1.2"; sha256="1671j3yirzdyhb02khx1yddslyig5jlnb0bdbgdlkb21n4zwaqa4"; depends=[]; }; notifyR = derive2 { name="notifyR"; version="1.02"; sha256="0jx76ic5r1crcgg0n0yqnka0gwniflfxakh838a98j9wb11wi6h5"; depends=[RCurl rjson]; }; notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; novelforestSG = derive2 { name="novelforestSG"; version="1.2.1"; sha256="17gn4qc5f3n0gdmm0r1zlg6jlzd3n5d8a3fx6fynxnj8ncq604i7"; depends=[]; }; nowcasting = derive2 { name="nowcasting"; version="1.1.4"; sha256="1nj34cbkv1xlhmcfhxs32shv00mz02rp95xj59qkq5by53sx8qwq"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL vars xts zoo]; }; noweb = derive2 { name="noweb"; version="1.1-2"; sha256="1h0v92l5jzgiy5rz33pan1l6rb3mykckmvn5c8jm3hhph6ipgqad"; depends=[]; }; - np = derive2 { name="np"; version="0.60-10"; sha256="06h8k0kdv5s258jr6s08fabvlycrbs7iq34jk2f2hfmqm2y4nyx2"; depends=[boot cubature quadprog quantreg]; }; + np = derive2 { name="np"; version="0.60-11"; sha256="1a9kzn37cddwfdki5zjmzanxp75pccdjnsvqfrh84hhcsy51pcx3"; depends=[boot cubature quadprog quantreg]; }; npExact = derive2 { name="npExact"; version="0.2"; sha256="055wm5lcj98wb71lqp2zdyl8kkwvi6lwmnaylynvr907xqabaqvd"; depends=[]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; npROCRegression = derive2 { name="npROCRegression"; version="1.0-5"; sha256="09ngfj0bd9cp19lpwsbknp2y71x36k03ph84bmf67wm1q2na7f93"; depends=[lattice]; }; @@ -12493,14 +13009,17 @@ in with self; { npsurv = derive2 { name="npsurv"; version="0.5-0"; sha256="1ihxhb42cga1hssj2jv4ah0f4hlwsky899ij5261fzh1wxvdp1xw"; depends=[lsei]; }; npsurvSS = derive2 { name="npsurvSS"; version="1.0.1"; sha256="0k9xvxii5527vynf7yy50j7z4jhxgk5ydhdcaaygm9ynx5yq14ip"; depends=[]; }; nptest = derive2 { name="nptest"; version="1.0-3"; sha256="1s6j4hs3m5pyh5ajy85gcclgb3l3ily92r4ak7wl5mn6vsnn6rvc"; depends=[]; }; + npwbs = derive2 { name="npwbs"; version="0.2.0"; sha256="029vxc6iy1p6nv0vw6097rvpkwlf0a24643gr6dbycpbail9qlqg"; depends=[]; }; nricens = derive2 { name="nricens"; version="1.6"; sha256="0fpgp6k3mhb0qxbx6248k9bscnmlzwj70mqh631a1nc4cpdjvw3q"; depends=[survival]; }; nsRFA = derive2 { name="nsRFA"; version="0.7-15"; sha256="004dm143v032b80knpz7pj3z71lci7vgd6hz1zz22rpfg27ghgdd"; depends=[]; }; nsROC = derive2 { name="nsROC"; version="1.1"; sha256="1fi7k61fja98kpn528jprjdycwz01rnqm368m82anxh21k7q4s1m"; depends=[sde survival]; }; nsapi = derive2 { name="nsapi"; version="0.1.1"; sha256="06xf2p6f911vwpzky47r35fjgjvlhp13p9pf1zlvjrv66kdw8vbp"; depends=[crul xml2]; }; nsarfima = derive2 { name="nsarfima"; version="0.2.0.0"; sha256="0sv63anrsh0ajfvvkb44zsvc7sxws3xpsgwxqa951gy98w8h58g5"; depends=[]; }; nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; }; + nsdr = derive2 { name="nsdr"; version="0.1.1"; sha256="1p73aj465lk52n3dikkqi54zm2f9v00ikpmry10p42qhfkgrw61l"; depends=[]; }; nse = derive2 { name="nse"; version="1.20"; sha256="037z164m78hdbwgnaa10jq50ngg3n9iigmyd1r5gz6hgvsr5sbnf"; depends=[coda mcmc mcmcse np Rcpp sandwich]; }; - nse2r = derive2 { name="nse2r"; version="0.1.4"; sha256="10gia98p15js3a9qdg98dv43w0s1a3nhwm0m6i1s6kaljbq09pqn"; depends=[httr jsonlite magrittr rvest xml2]; }; + nse2r = derive2 { name="nse2r"; version="0.1.5"; sha256="1gwq8x3sn2f4p3yivmg2dljpdjcwsy2s6467pnwlcjdmr3sqgv2b"; depends=[httr jsonlite magrittr rvest xml2]; }; + nser = derive2 { name="nser"; version="1.3.2"; sha256="0pyijh05iiq02g539f72dq3c021h0xhi595bxca36qfr4nxp0pr2"; depends=[dplyr googleVis gt jsonlite magrittr readr RSelenium rvest scales stringr tidyverse]; }; nseval = derive2 { name="nseval"; version="0.4"; sha256="18avir5zllvm2sbi9616k7dlb8yxhvnbji7xshr4kcfvy1fvn2ia"; depends=[]; }; nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; }; nsga3 = derive2 { name="nsga3"; version="0.0.3"; sha256="1jv3kw22jw24n7lnwhq3857mygr2yfv8c5xp3lbqqgz5840cdfa1"; depends=[mlr parallelMap rPref xgboost]; }; @@ -12509,36 +13028,36 @@ in with self; { nsprcomp = derive2 { name="nsprcomp"; version="0.5.1-2"; sha256="1zlc1ximx96f235c0l8qfs6vbp1kpnbf943wxsfahnnlnxvwi59f"; depends=[]; }; nsrr = derive2 { name="nsrr"; version="0.2.0"; sha256="1x1c7pvyfvzmaymxcz6ghr5002wz48796c3hsihwbx6951w623sq"; depends=[digest httr jsonlite]; }; nsyllable = derive2 { name="nsyllable"; version="1.0"; sha256="004qb43j8ygr9ay63b38w0fwm24bhlzd206sxg88hh5ia69fw8ms"; depends=[]; }; - nucim = derive2 { name="nucim"; version="1.0.9"; sha256="19vj1xkzw1b02lyfsf7c9s37jcv95bs30larlzj3074jdf4jznsm"; depends=[bioimagetools EBImage fields stringr]; }; + ntwk = derive2 { name="ntwk"; version="1.0.0"; sha256="1c12c3pq992f02z3ikx17zv2djq9d9ly232ha0j5jswsksqzx024"; depends=[assertthat copCAR ghyp Matrix mvtnorm pracma zoo]; }; + nucim = derive2 { name="nucim"; version="1.0.11"; sha256="12qfs4xd8lnkjhb0gkvxym07rndrwh5idvppj16v78amrk96rj5z"; depends=[bioimagetools EBImage fields stringr]; }; nullabor = derive2 { name="nullabor"; version="0.3.9"; sha256="19nfmsnzndg9pdjg7m9w4vm4c3209ny52cpjdhmmhggvf7dxaiyg"; depends=[dplyr forecast fpc ggplot2 magrittr MASS moments purrr rlang tibble tidyr tsibble viridis]; }; numDeriv = derive2 { name="numDeriv"; version="2016.8-1.1"; sha256="0idk02pqkziik932bd8k72d1q775g1is3m4bc861pcxfz6gx3i6q"; depends=[]; }; numGen = derive2 { name="numGen"; version="0.1.1"; sha256="1y41wq31r8126dz1sj23smq2k6v9yqczq4ddgzqb73dsrx9dmmc0"; depends=[]; }; numKM = derive2 { name="numKM"; version="0.2.0"; sha256="0g5jw12fmfc6nl6a3ghpslkjd2d7pbihl70sks35r7dalmr6ihzk"; depends=[survival]; }; numOSL = derive2 { name="numOSL"; version="2.6"; sha256="03h1p56650x4my5vq5jlmjsz5xj0w2j75qfr08rh7nr38dwgp1k8"; depends=[]; }; - numbers = derive2 { name="numbers"; version="0.8-1"; sha256="00rfdmh86wb7ppnx2iyijway48z10840pxjwdmwdifvcmwavy6kk"; depends=[]; }; + numbers = derive2 { name="numbers"; version="0.8-2"; sha256="0gapcnk6zw9n77yddwsj0v6lzxm7ly2myjjj8kw5wjyng0l27b61"; depends=[]; }; numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.6.4"; sha256="034dmrhp3d0r4hspy8490wjpknc83dsiyjhl3nha0b4w8vbcalsz"; depends=[glue]; }; nutriNetwork = derive2 { name="nutriNetwork"; version="0.1.1"; sha256="0ya95h88jkiwc7cg7ic8bmyd7b0lgnhxrywwqvi2j6m6nbvvaxzy"; depends=[glasso huge igraph Matrix tmvtnorm]; }; nvctr = derive2 { name="nvctr"; version="0.1.4"; sha256="1r7q9snr9ya1586fwbyvnk8rlb9yikl4yp3bn9kni0sw820npk1d"; depends=[magrittr pracma]; }; - nvmix = derive2 { name="nvmix"; version="0.0-5"; sha256="15nipvfb92r1dx4shvix8hhjg0mzvrwprgzgdzkdmhvxk9d8rswd"; depends=[copula Matrix pcaPP qrng]; }; - nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; + nvmix = derive2 { name="nvmix"; version="0.0-6"; sha256="1kz271s9bkxy0s706fy8hb8l82ynczhz9fz7rrxp0cyw6ifvcm2d"; depends=[ADGofTest copula Matrix pcaPP qrng]; }; nycflights13 = derive2 { name="nycflights13"; version="1.0.2"; sha256="07aa76c77pm1wpzkwjmzv8n6ir5i6fxawx8wx586gwc5wajcb1qf"; depends=[tibble]; }; nzelect = derive2 { name="nzelect"; version="0.4.0"; sha256="19kcbq454yg9g76ix7v3nibgw2203d7vv6f2d6d2zkcc0h08bjm7"; depends=[]; }; nzffdr = derive2 { name="nzffdr"; version="1.0.0"; sha256="1r7pdv3jrkwnncyq61nb8js9y3kmxlg3d2cvb8b3i9fchx4059z6"; depends=[chron curl httr jsonlite stringr xml2]; }; - nzilbb_labbcat = derive2 { name="nzilbb.labbcat"; version="0.6-3"; sha256="19ys3l40xmqmkhhpq3l7hz8ni4wqn1j8h23hqic8r1arf4ci9b89"; depends=[httr jsonlite rstudioapi stringr]; }; + nzilbb_labbcat = derive2 { name="nzilbb.labbcat"; version="1.0-1"; sha256="0lypdwyvihza88jnccvh4wapfivsjy9sgxj4hvai52bkrw92578d"; depends=[httr jsonlite rstudioapi stringr]; }; nzpullover = derive2 { name="nzpullover"; version="0.3.0"; sha256="0b3mz5i58m48fa1x7gv4l3gqj0gvrar201ph2l1gkbcnfmazwjp8"; depends=[]; }; - o2geosocial = derive2 { name="o2geosocial"; version="1.0.1"; sha256="1q4y606cpyfjik56zw019xscrshm4s9n0y0g37izmd02cv17a4ik"; depends=[data_table geosphere ggplot2 outbreaker2 Rcpp visNetwork]; }; + o2geosocial = derive2 { name="o2geosocial"; version="1.1.0"; sha256="158nbc45h4k677lgx9n976d9kz7hy8fb7z5s2v6pmkmh521jdn2a"; depends=[data_table geosphere ggplot2 outbreaker2 Rcpp visNetwork]; }; oRus = derive2 { name="oRus"; version="1.0.0"; sha256="0q6hgiidcpm95pyisndihxjg78v6k1zycdqd72309aankdk0g5h4"; depends=[dplyr knitr rmarkdown stringr tibble tidytext tm topicmodels xlsx]; }; oaColors = derive2 { name="oaColors"; version="0.0.4"; sha256="040sdqrk9dciylnnrrshlj06s9qhvngii9shx1p8412ip7mk8r1m"; depends=[MASS RColorBrewer]; }; oaPlots = derive2 { name="oaPlots"; version="0.0.25"; sha256="0c5ig1ar02vg38pjjmp3gd53ij1j7pzajs0zrlfajz141qkv2ysr"; depends=[ggplot2 oaColors]; }; - oai = derive2 { name="oai"; version="0.3.0"; sha256="1ipw9bq3ra66d1ddj1rylyyd20mlcb2i7phzhywra53s1fdifq1g"; depends=[httr plyr stringr tibble xml2]; }; + oai = derive2 { name="oai"; version="0.3.2"; sha256="1zcbcxhw692s0y6izvwazyzhgx0iwsxsbcan2nk0mb7n11p7bypb"; depends=[httr plyr stringr tibble xml2]; }; oaqc = derive2 { name="oaqc"; version="1.0"; sha256="1rc0l79xygmr2rp5sjadzigbj65a13z5xlvrxzy26cl0wsxwhmjf"; depends=[]; }; oaxaca = derive2 { name="oaxaca"; version="0.1.4"; sha256="12w5l2a8i2964rxy9km2srlycx35y7ia8p07ra7gsxr4h8156z3c"; depends=[Formula ggplot2 reshape2]; }; obAnalytics = derive2 { name="obAnalytics"; version="0.1.1"; sha256="1l4ld120qk0adycmvqrkzada10kb7z03lj2njzqagmacl1z8598f"; depends=[ggplot2 reshape2 zoo]; }; obfuscatoR = derive2 { name="obfuscatoR"; version="0.2.1"; sha256="1pnlbfsp5fjvhwn2yl495v38g1wjg5l4ry79i1a2jznq2l91hn4p"; depends=[crayon matrixStats readr Rfast stringr tibble]; }; - objectProperties = derive2 { name="objectProperties"; version="0.6.5"; sha256="0wn19byb1ia5gsfmdi6cj05pnlxbr3zcrjabjg3g1d7b58nz7wlh"; depends=[objectSignals]; }; + objectProperties = derive2 { name="objectProperties"; version="0.6.7"; sha256="1gsxbps528kmg5md9q26yfjz7p50h0k81dpfwklvsh6x0mwmranb"; depends=[objectSignals]; }; objectSignals = derive2 { name="objectSignals"; version="0.10.2"; sha256="1rcgfq1i3nz2q93vv4l069f3mli1c6fd5dhhhw1p7cc4sy81008w"; depends=[]; }; - objectremover = derive2 { name="objectremover"; version="0.7.0"; sha256="0mspnnks04s8w6q2g0nffd0675g07hkaql44kz6zrc5329qx7jpi"; depends=[miniUI shiny shinyalert]; }; + objectremover = derive2 { name="objectremover"; version="0.8.1"; sha256="0qywigwb6r5lzvw8ylgriwignk4ayfkvfnmc6cb1yxsg0hrc4hiv"; depends=[miniUI shiny]; }; obliqueRF = derive2 { name="obliqueRF"; version="0.3"; sha256="1bwlgv820mmpc6vg26bsdlfy2p78586i3y42hkzbw3z1fmwq3pz5"; depends=[e1071 mda pls ROCR]; }; obliqueRSF = derive2 { name="obliqueRSF"; version="0.1.1"; sha256="1picy19mrgycfxpng5qqk7q5im3m2apx8w4jxmkslpmgg1c5q2ly"; depends=[data_table dplyr ggplot2 ggthemes glmnet missForest pec prodlim purrr Rcpp RcppArmadillo rlang scales survival tidyr]; }; obs_agree = derive2 { name="obs.agree"; version="1.0"; sha256="191xshnrncjqzwd2rdq334vsx0338q3y3k1nbm04hdaysbnla9jv"; depends=[]; }; @@ -12546,41 +13065,42 @@ in with self; { observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; oc = derive2 { name="oc"; version="1.2"; sha256="0cw1gvz6gk8j718zmywqp03h9cnzn132nwbv45gr00xg2s9h7dk7"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.1"; sha256="1aka29qqwbd494kvi15yyyqkb9hks4ky2gcvykxhx2drm2fnsn4g"; depends=[]; }; - occCite = derive2 { name="occCite"; version="0.4.7"; sha256="0zsrkwzzd4rcgy7s6wiihf26pvlnvcbqh124cm90fdgpd2q84nhm"; depends=[bib2df BIEN bit64 DBI dplyr ggplot2 htmltools leaflet lubridate RColorBrewer rgbif rlang RPostgreSQL stringr taxize tidyr viridis waffle]; }; + occCite = derive2 { name="occCite"; version="0.4.9"; sha256="1z01b0sjl6s0iqx5ky8vai5rnzz4gqqb2slnzkxk0dpld8y36pk3"; depends=[bib2df BIEN DBI dplyr ggplot2 htmltools leaflet lubridate RColorBrewer rgbif rlang RPostgreSQL stringr taxize tidyr viridis waffle]; }; + occupancy = derive2 { name="occupancy"; version="1.2"; sha256="0j50vg1405n1hp72xqsq1hp3gdbfx5yq9w1zdv6dzjc6vjhbx00d"; depends=[matrixStats]; }; ocd = derive2 { name="ocd"; version="1.1"; sha256="06pyc352pvn85k76z9797gwk0ksbb3snvh6krysp68k3lcygq872"; depends=[]; }; oce = derive2 { name="oce"; version="1.4-0"; sha256="0224fgd51fchn8apdi6x0n3ycl6zdbwch9janmidqr0i01418d1v"; depends=[gsw Rcpp sf testthat]; }; oceanis = derive2 { name="oceanis"; version="1.7.5.2"; sha256="1ng6qlsbybnv77lbqhmzvi93ydiy99zbcgl3yszrqwnw0ld08k9j"; depends=[classInt dplyr DT ggplot2 leaflet leaflet_extras lwgeom mapview sf shiny shinyBS shinyjs shinythemes stringr units]; }; oceanmap = derive2 { name="oceanmap"; version="0.1.1"; sha256="06h4yxqcn3rjr3m2n82w128z110a4k5rg6msrbd0gcqksxc4vd2v"; depends=[abind extrafont fields lubridate mapdata maps maptools ncdf4 plotrix raster sp]; }; - oceanwaves = derive2 { name="oceanwaves"; version="0.1.0"; sha256="0izgnqjji3xrvv8xbpsdbrx53wdb3rg3045xx6gcknfl2fj5iky7"; depends=[bspec ggplot2 signal]; }; + oceanwaves = derive2 { name="oceanwaves"; version="0.2.0"; sha256="1v4gj4ippv1l3r77z2ic19x5zi5lpsh5wihaqay3264zhpb3kv9a"; depends=[bspec ggplot2 signal]; }; ocedata = derive2 { name="ocedata"; version="0.1.8"; sha256="01m2pflk3zgqbqmv34w7mh8bs1lbpagdmhvhzji2j6p1fysvhqr1"; depends=[testthat]; }; ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; oclust = derive2 { name="oclust"; version="0.1.0"; sha256="005ml6vhi9rw6js2v4f1dc2ci8kcd7iwrkgbs4c1qxc836ygq0yx"; depends=[entropy mclust]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; ocp = derive2 { name="ocp"; version="0.1.1"; sha256="0q52s8j3z3xwnma3sxx6019qxid66bf0a43w4g8xjagplwps57dx"; depends=[]; }; - ocs4R = derive2 { name="ocs4R"; version="0.1"; sha256="1sm2fl503ky4pxv9873zykidb56f7dygq1xckjsh0d7m78n4gzx5"; depends=[curl httr jsonlite openssl R6 XML]; }; - od = derive2 { name="od"; version="0.2.1"; sha256="0cp38hvx55pr5acqjz2f08rih40a2rr3w8bz9qs76zib9ii5lx70"; depends=[sfheaders]; }; + ocs4R = derive2 { name="ocs4R"; version="0.2-1"; sha256="1phkji9p622v6hq309j7ggnc7gjhgwmm9zwys3nk9v0ac9k3g0dq"; depends=[curl httr jsonlite keyring openssl R6 XML]; }; + od = derive2 { name="od"; version="0.3.1"; sha256="1fbx0w10wmd9f99kdigx4k21d8bsa8dfjzm9ibbf14z2908899ag"; depends=[sfheaders]; }; odbc = derive2 { name="odbc"; version="1.3.2"; sha256="1s1fbnkg6xlch94w5vwfwa9pa0rc722jbzckhkbl9m80z93hj4pm"; depends=[bit64 blob DBI hms Rcpp rlang]; }; odds_converter = derive2 { name="odds.converter"; version="1.4.8"; sha256="09s8pg55gpsxmrbimzg5rsr1n07la93781sar6vab5p9zn9zxgx4"; depends=[]; }; - odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.3"; sha256="18ad9qkq3mqdahn1hwy3nxx2kav1y6aa3yc1bj5mh0grl8fd57s7"; depends=[MASS]; }; + odds_n_ends = derive2 { name="odds.n.ends"; version="0.1.4"; sha256="1md0m1z8a6jnmkjj2njngpqpasnvgngdxj57r3jc7jq356qzg707"; depends=[MASS]; }; oddsratio = derive2 { name="oddsratio"; version="2.0.1"; sha256="1db0pxi5j18rvi8dyc2xx1im3l269775vpjjavapjcv2pylfg5r0"; depends=[ggplot2 mgcv]; }; oddstream = derive2 { name="oddstream"; version="0.5.0"; sha256="1nwjw7fq6b4jdq4m2w0a7xgmzjg5a6pbma1d3r9msiz8rnhb0c54"; depends=[dplyr ggplot2 kernlab ks magrittr MASS mgcv moments mvtsplot pcaPP RColorBrewer RcppRoll reshape tibble tidyr]; }; + odeGUTS = derive2 { name="odeGUTS"; version="1.0.1"; sha256="1c3w934dwh5jsh5z169isv9kqh8xbfgp4rk7k1sp8mj0kvy8nqc4"; depends=[deSolve dplyr magrittr tidyr zoo]; }; odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; - odin = derive2 { name="odin"; version="1.0.8"; sha256="1wpkyaig81kwbq08cbn02kf6c8sfcq49kd7d66ibrd93ai239f26"; depends=[cinterpolate crayon deSolve digest jsonlite R6 ring]; }; + odin = derive2 { name="odin"; version="1.2.1"; sha256="0xx31wyjdmad66ijwks64irf0j78hdjcifs5i8pla587xyv26ykk"; depends=[cinterpolate deSolve digest glue jsonlite R6 ring withr]; }; odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; odpc = derive2 { name="odpc"; version="2.0.4"; sha256="1525apa5x4jqf8ijdc9xl60fgxsi5xsirhd35cmnc362sd7k2jjd"; depends=[doParallel foreach forecast MASS Rcpp RcppArmadillo]; }; - odr = derive2 { name="odr"; version="1.0.2"; sha256="0dj5piyd6h92q6agv8yvzky3qpxjn6zpgvf502hf0n6k9gx6kdpl"; depends=[]; }; + odr = derive2 { name="odr"; version="1.2.1"; sha256="1k5qr5s28x14k831l92gx3zwfadq0q7nbnxj172hadhmggxfhkqc"; depends=[]; }; oem = derive2 { name="oem"; version="2.0.10"; sha256="1nf9ja4l7b9gnnvv216dz9siy02432qgyg930vcrqq3l8g05r6zc"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; oenb = derive2 { name="oenb"; version="0.0.2"; sha256="1jgxw7ycx2lcdzglg9nix8k08fs4r6i5jdsjzrd6w1dg6smsinl5"; depends=[dplyr XML]; }; ofGEM = derive2 { name="ofGEM"; version="1.0"; sha256="0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k"; depends=[CompQuadForm forestplot MASS]; }; officedown = derive2 { name="officedown"; version="0.2.2"; sha256="0xbkdgl14nmhl110xxvsxm3zi4120v1fhhb9gb5q3ba6wd5n245g"; depends=[knitr memoise officer rlang rmarkdown rvg uuid xml2 yaml]; }; - officer = derive2 { name="officer"; version="0.3.18"; sha256="1j3bv4j8x5ijj0j447vpdsk4p8pl3ncwdwnns6n3plfrqgsf3vsg"; depends=[R6 uuid xml2 zip]; }; + officer = derive2 { name="officer"; version="0.4.0"; sha256="1za3vb1wmsianh9ygm6h5lyf796rni6w2adplz4z6z93r3mz4cmv"; depends=[R6 uuid xml2 zip]; }; offlineChange = derive2 { name="offlineChange"; version="0.0.4"; sha256="005afrm4ki4zz3zkgrf8c1v9gf5cjhc5g50mjkqya3r8npaccwq2"; depends=[Rcpp]; }; oglmx = derive2 { name="oglmx"; version="3.0.0.0"; sha256="13axmhbqhv4kkcdsdmp9r7p0d0kyqlsaqgyyllbkxlxb4hfz79b6"; depends=[maxLik]; }; ohenery = derive2 { name="ohenery"; version="0.1.1"; sha256="0i7cc110c30y7dm86srh2xkikkmlr28mvy0kkjxywxmiwnrsmzjq"; depends=[dplyr magrittr maxLik Rcpp]; }; ohtadstats = derive2 { name="ohtadstats"; version="2.1.1"; sha256="0hkjs322vii1dsminlkwpwi12sc9pd88jag7p4dmy6nfw2hh2d69"; depends=[lattice]; }; oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; }; ojsr = derive2 { name="ojsr"; version="0.1.2"; sha256="0nwdws9kqnya9qjc939b7ksrf7ri6d25zzcdxhyhabirhnrqdg7m"; depends=[dplyr magrittr purrr rlang rvest tidyr urltools xml2]; }; - okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; ollggamma = derive2 { name="ollggamma"; version="1.0.2"; sha256="1990hr9gww636xr4gkvc816hd0pc78nw3ypbzflkh5g3pmsn7bc2"; depends=[]; }; @@ -12595,6 +13115,9 @@ in with self; { omsvg = derive2 { name="omsvg"; version="0.1.0"; sha256="018sphpmmgpq5alag0il83q51f3r3jx3pnnzjrvg4gn6691nkwvz"; depends=[dplyr gt htmltools magrittr rlang sass xml2]; }; omu = derive2 { name="omu"; version="1.0.4"; sha256="03dvbgxf5d181wka0gpf3sr008fzzva57xvdniynbgqskgcn4qi3"; depends=[dplyr ggfortify ggplot2 KEGGREST magrittr plyr reshape2 stringr tidyr]; }; onbabynames = derive2 { name="onbabynames"; version="0.0.1"; sha256="13sp9gnqnsx2b8dq13qnkin813clnanh6hzv3vi7bxy514pvmisj"; depends=[tibble]; }; + onbrand = derive2 { name="onbrand"; version="1.0.1"; sha256="1s4mbvy01jfh1hxzav0ghnjql2zbxh2xl7akll8c7bvr45hbk8dp"; depends=[dplyr flextable ggplot2 magrittr officer rlang stringr yaml]; }; + onc_api = derive2 { name="onc.api"; version="2.0.1.0"; sha256="10scbhg6aniqzrbkblhfhz9ni710xzppbzfrr4wrhsy1z5y2nfwc"; depends=[anytime crayon httr humanize lubridate stringi testthat tictoc]; }; + oncoPredict = derive2 { name="oncoPredict"; version="0.2"; sha256="1slq5vp78n5hcq24vlg35r6xansdgriyjw8y9iyb0lj3cdaq38c3"; depends=[BiocGenerics car gdata genefilter GenomicFeatures GenomicRanges glmnet IRanges maftools org_Hs_eg_db pls preprocessCore readxl ridge S4Vectors sva tidyverse TxDb_Hsapiens_UCSC_hg19_knownGene]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; oncrawlR = derive2 { name="oncrawlR"; version="0.2.0"; sha256="0cm26diaf3jlzfrpgh13q0hakakmj6vy41wk9z0w81az4jcg9sn9"; depends=[caret DALEX dplyr e1071 formattable fs ggplot2 htmltools jsonlite pdp pROC RCurl readr rjson rlang rlist scales sparkline tidyr webshot xgboost]; }; ondisc = derive2 { name="ondisc"; version="1.0.0"; sha256="071jrldclkaz5lfp3k5fh1ilpgvvcnakh2vvnr69n3pri9dl3fls"; depends=[crayon data_table dplyr magrittr Matrix Rcpp readr rhdf5 Rhdf5lib]; }; @@ -12603,59 +13126,60 @@ in with self; { onelogin = derive2 { name="onelogin"; version="0.2.0"; sha256="06p3a8kaxmvsj8nn7dy8w6wv1jjw67is991hqg9q0fa20ifym3dl"; depends=[glue jsonlite magrittr R6 safer tibble]; }; onemap = derive2 { name="onemap"; version="2.1.3"; sha256="0fwkr845zz0j8ccrwpksb28lly1rsgj3603ak1aqqgmlx6481p08"; depends=[ggplot2 MDSMap plotly Rcpp reshape2]; }; onemapsgapi = derive2 { name="onemapsgapi"; version="1.0.0"; sha256="11w3xkjxhjf0b78hfjxjk650giswaf1js471backz4pcb97gaigl"; depends=[dplyr furrr future httr purrr rlang stringr tidyr]; }; - onepass = derive2 { name="onepass"; version="0.1.1"; sha256="09d2lifnhmijmp3arx4gf5j9jf3y0i8k07hyjg06aij2d7nvi74s"; depends=[jsonlite]; }; + onepass = derive2 { name="onepass"; version="0.1.2"; sha256="1r8wk00aqc0sc7l6mmy1k4hkijfikynysrx5vvahbd6mlcdb3bmp"; depends=[jsonlite]; }; onewaytests = derive2 { name="onewaytests"; version="2.6"; sha256="05q2ir65x9pvsiim4l029hjhm12niiqjgk5rsx47i6vx23ffg8ir"; depends=[car ggplot2 moments nortest]; }; onion = derive2 { name="onion"; version="1.5-0"; sha256="07q5wwphb6jsk7ya7hgsf5782yalvhyc7h43hsd9rg4rhpmy8in9"; depends=[emulator]; }; onlineBcp = derive2 { name="onlineBcp"; version="0.1.1"; sha256="0azm3xmk4fqdzwssdx2g9k00fcz6inwv1qj4lvd0wdz6i7grya8g"; depends=[VIM]; }; onlineCOV = derive2 { name="onlineCOV"; version="1.3"; sha256="04ikvsd76f6xhja7djyv433m88lfj2vf0y9qi6x1s4i9kh8xkbz9"; depends=[]; }; onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; onlineVAR = derive2 { name="onlineVAR"; version="0.1-1"; sha256="01z2d91mbdjvwwiqjq1dbqp50jbc9v6d7nw4gs7d1abhsqyiqa13"; depends=[lattice]; }; - onlineforecast = derive2 { name="onlineforecast"; version="0.9.3"; sha256="1bsdw4z651ld3p6k2ajahql0ixv65vppqyn6kd9xmcvw6xqys4m1"; depends=[digest pbs R6 Rcpp RcppArmadillo]; }; + onlineforecast = derive2 { name="onlineforecast"; version="0.10.0"; sha256="0h9v2qqchyzy6qmlppbj8c5w2fykkw6s9y83b0w6zfnrhcf4l86n"; depends=[digest pbs R6 Rcpp RcppArmadillo]; }; + onlineretail = derive2 { name="onlineretail"; version="0.1.2"; sha256="0lid3g4v51c664304cxgjm209qxv88hqglv89frmj4afc0y6k7sc"; depends=[]; }; onls = derive2 { name="onls"; version="0.1-1"; sha256="0m7pnlzkqwzi6jncjzxzfvznipd4wg03zd9fc0ymwm9jvhm4p14g"; depends=[minpack_lm]; }; onnx = derive2 { name="onnx"; version="0.0.3"; sha256="1s0swrcff9v9ffbjkraahmb398gh2jrca2wf5k6gs8037frnl8wd"; depends=[reticulate]; }; + onpoint = derive2 { name="onpoint"; version="1.0.1"; sha256="13367azi6wcdc7gbpfk02d2mc5waqh4jfsd7zrxzbqb2qka9pfhr"; depends=[ggplot2 spatstat_core spatstat_geom]; }; onsr = derive2 { name="onsr"; version="1.0.0"; sha256="04q88v07r2nzsrxxjy8wlmr65m8czllyv4wq40ms46m83s4pfhpj"; depends=[httr jsonlite readr tibble]; }; ontoFAST = derive2 { name="ontoFAST"; version="1.0.0"; sha256="0l3d8bp86849rp0qrs1dfv7bjmrfdqvahb1x656vk69fi20722ma"; depends=[dplyr ontologyIndex pbapply plyr shiny shinydashboard stringr sunburstR usethis visNetwork]; }; ontologyIndex = derive2 { name="ontologyIndex"; version="2.7"; sha256="0j3h1spqwjhh1wbmwivmqcyi042yy7d565c3kxgn70xrmy693x1k"; depends=[]; }; ontologyPlot = derive2 { name="ontologyPlot"; version="1.6"; sha256="0n51x2im134wq3a54wrv02j1pgkpm1qcgb9hd0y6fchz43i039j1"; depends=[ontologyIndex paintmap Rgraphviz]; }; ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.5"; sha256="035z572lbsfcnr9c0hl8gir1kgk0dw8dxzr3v8dqd93k6jr6kaxb"; depends=[ontologyIndex Rcpp]; }; - oolong = derive2 { name="oolong"; version="0.3.11"; sha256="0yv3xqzyyl81d1xii2b66akmibn1l35lxcv8yr2nflz4b89qcyhd"; depends=[cowplot digest dplyr ggplot2 irr miniUI purrr quanteda R6 shiny stm text2vec tibble]; }; + oolong = derive2 { name="oolong"; version="0.4.0"; sha256="0b8yx0fl5lirfmpwmc9ip6n1253rkzq9r9423nla57rc6xzzply8"; depends=[cli cowplot digest dplyr ggplot2 irr keyATM miniUI purrr quanteda R6 shiny text2vec tibble]; }; oompaBase = derive2 { name="oompaBase"; version="3.2.9"; sha256="1cmw2s5dznmv675484jgvkzgvi6vhg0zbxsq6zhpqsisf672pjhl"; depends=[cluster]; }; oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; }; - opalr = derive2 { name="opalr"; version="2.1.0"; sha256="15hvk4kda5cw31pmh3w14pkw6yq3mx90l1s8lh98lr2di63f9hln"; depends=[httr jsonlite mime progress]; }; - opdisDownsampling = derive2 { name="opdisDownsampling"; version="0.1.0"; sha256="1f071zmspcwgh3am8mb7aapm73an7453pfkv46v6wg3by2ww6nf2"; depends=[caTools pbmcapply pracma twosamples]; }; - openCR = derive2 { name="openCR"; version="1.5.0"; sha256="0im2r9f6n0a7wxzdrrmzydiwy5c55bxhr4f9pxxccgz1k596q5yq"; depends=[abind MASS nlme plyr Rcpp RcppParallel secr stringr]; }; + ooplah = derive2 { name="ooplah"; version="0.1.0"; sha256="0hrbpidcrnvm14qdjhcz4j4im1caydxkj4k9zmqs7dq3wv10rgr9"; depends=[R6]; }; + opalr = derive2 { name="opalr"; version="3.0.1"; sha256="0vrwr749alj181hhb8n4474hdhzmpgh8q2ivx0bbllg73jx2myxg"; depends=[httr jsonlite labelled mime progress]; }; + opdisDownsampling = derive2 { name="opdisDownsampling"; version="0.6.0"; sha256="0x188js6vnbrbiim6h53yibbpx3qjinaikajv40y9245q4rxva5b"; depends=[benchmarkme caTools pbmcapply pracma twosamples]; }; + openCR = derive2 { name="openCR"; version="2.1.0"; sha256="1399kmvxhb4rhhdv8ishi1bwsjma1fflz5hpl9qjqpvirr1aazb2"; depends=[abind BH MASS nlme plyr Rcpp RcppParallel secr stringr]; }; openEBGM = derive2 { name="openEBGM"; version="0.8.3"; sha256="120lp7fy6abj6f8g6naq4018d0dfzz6bq3dlh0xdhd4iclb7pplv"; depends=[data_table ggplot2]; }; openMSE = derive2 { name="openMSE"; version="1.0.0"; sha256="15jp9hybnkwmnkcqawhpd3y3imq6wfxxzxzh90yx4cvzky36hf89"; depends=[crayon DLMtool MSEtool SAMtool]; }; openNLP = derive2 { name="openNLP"; version="0.2-7"; sha256="15yl74wv6w1d2wwpn1xlkkpam3c62977gnqal651fv623v29gg35"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.2.2"; sha256="0f3nv6b33r3m7xlh2adbi0wlzr2dw6jfsrmz8fjrlh0l7xakf1hz"; depends=[data_table progress raster rgdal rgrass7 sp SSN]; }; - openSkies = derive2 { name="openSkies"; version="1.1.1"; sha256="1mf3z35h1aqzbiqffkbx124k2s486j7fzrl8gjljn9l6mxrknll6"; depends=[cluster dbscan ggmap ggplot2 httr magick R6 ssh xml2]; }; - openVA = derive2 { name="openVA"; version="1.0.12"; sha256="15xqw0fw50780l2zysi53hv5kg73vldzpv5b81qlvg2wa1j3cxwb"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; + openSkies = derive2 { name="openSkies"; version="1.1.4"; sha256="126ajxvqlwv5g0mvr7wnsh40jhjpn14yxhhil3sf7lmj4b33a60v"; depends=[cluster dbscan ggmap ggplot2 httr magick R6 ssh xml2]; }; + openVA = derive2 { name="openVA"; version="1.0.13"; sha256="1hps67qlimhrjk3ymmr0jgqac8z6vilqgrchqp6z7vydqirfyp5l"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; - openair = derive2 { name="openair"; version="2.8-3"; sha256="02x31z3nr9r9429nhxq74sxh4ff9r969z14qxdzhsdamp92zcfk4"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; + openair = derive2 { name="openair"; version="2.8-4"; sha256="0gh0vs8g8l03d3yyx4h7k12km7m9yn76369ydq0iq24g5wjjw89k"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr Rcpp readr rlang tidyr]; }; openblender = derive2 { name="openblender"; version="0.5.81"; sha256="01akixxj04kgrxhv04icrivfpnipnpg9j62i3y19q3jkl9846lh1"; depends=[httr jsonlite]; }; opencage = derive2 { name="opencage"; version="0.2.2"; sha256="1sjkpp6cj6ivd68p6ql6vwgdvy0fwfkjv84wgwgb4i7f4mnxgnff"; depends=[crul dplyr jsonlite lifecycle memoise progress purrr ratelimitr rlang tibble tidyr withr]; }; - opencastR = derive2 { name="opencastR"; version="0.1.3"; sha256="1ljn7bzrqc2sgah1a6q2g9hi38nm8davhdc2vyzx7d40z7ysfpas"; depends=[httr jsonlite]; }; - opencpu = derive2 { name="opencpu"; version="2.2.2"; sha256="0dr3ga8vw10vllqjq6n53dwivvgvzrgrjcn17kmabp620533bj1k"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; + opencpu = derive2 { name="opencpu"; version="2.2.5"; sha256="1qlwx8iq30qfy2sh0v31pxg955bj4zs0r7v8yklbdwb3qw7kv30g"; depends=[brew curl evaluate httpuv jsonlite knitr mime openssl protolite rappdirs remotes sys webutils zip]; }; opencv = derive2 { name="opencv"; version="0.2.1"; sha256="1zb6qdvlgylzm9afq8ybcrn2w5wcym6zi4b36sycp4clbc7gncq5"; depends=[magrittr Rcpp]; }; opendatatoronto = derive2 { name="opendatatoronto"; version="0.1.4"; sha256="0ggf25ry31xz69fl95cglg45ld8w7rc83wci609fmb63bhj8dzlg"; depends=[ckanr curl magrittr readxl sf tibble xml2]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; - openintro = derive2 { name="openintro"; version="2.1.0"; sha256="0qxgjk9bnkicx5hsg1imgp3v61l35714akarwflaazjrrgpf88j9"; depends=[airports cherryblossom ggplot2 readr rmarkdown tibble usdata]; }; + openintro = derive2 { name="openintro"; version="2.2.0"; sha256="0jvgbb9az73sidr58lpz2p8gjigmi4873dpvzqbv7r8jzr1vqhvz"; depends=[airports cherryblossom ggplot2 readr rmarkdown tibble usdata]; }; openmetrics = derive2 { name="openmetrics"; version="0.3.0"; sha256="0bcljsirlkxn0h87j2g2jb6spcik84h7nms06mcj40ckx188yr82"; depends=[R6]; }; - openssl = derive2 { name="openssl"; version="1.4.4"; sha256="0x68di44vrqvikr419mgh9wlvbhxs52zda9pb6spikx69m4v83wj"; depends=[askpass]; }; - opentimsr = derive2 { name="opentimsr"; version="1.0.5"; sha256="07yqx1rv53l0z2dlv9y1mrwv77jwqpyzkbg648zpqajfwr7ndqjx"; depends=[DBI Rcpp RSQLite]; }; + openssl = derive2 { name="openssl"; version="1.4.5"; sha256="1xy1w0rljzsgvsg91fh9hs6h9rx58mza1vg6rig9ykp9m2ml3hag"; depends=[askpass]; }; + opentimsr = derive2 { name="opentimsr"; version="1.0.7"; sha256="0hccknbhw826gwzrqp0709xhkshnmbgzpgmg0qv2fqlq1z5qfxpp"; depends=[DBI Rcpp RSQLite]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; opentripplanner = derive2 { name="opentripplanner"; version="0.3.1"; sha256="1bavs7k27zicsjvz65va45cpmmviddxsgqir0hvpl9z40ml1gnp0"; depends=[checkmate curl data_table geodist googlePolylines lubridate pbapply rjson sf sfheaders tibble]; }; - openxlsx = derive2 { name="openxlsx"; version="4.2.3"; sha256="0vz4nlrwgsiifrgza8kfd9i1c0ya6plymrgk59vyy2z54vc8kvyd"; depends=[Rcpp stringi zip]; }; - opera = derive2 { name="opera"; version="1.1"; sha256="1nvm7a1g0pzzlpyk7g5plys1byl4xq2wz59hqys5gxiq0y5sgqwm"; depends=[]; }; + openxlsx = derive2 { name="openxlsx"; version="4.2.4"; sha256="0vn8ifxb7ccip6b1ijf5lpa6c0n5y5ll8fbabybsb8nfc0y1nmxg"; depends=[Rcpp stringi zip]; }; + opera = derive2 { name="opera"; version="1.1.1"; sha256="0b86c87yb8ajbfgjacld1jhgqc4bp93j66mni053xnyyd8zdv302"; depends=[]; }; operator_tools = derive2 { name="operator.tools"; version="1.6.3"; sha256="1v4dg7xhz24dnp0zxn815x1405ig64ibii6y40la1gvmzcc41dz5"; depends=[]; }; operators = derive2 { name="operators"; version="0.1-8"; sha256="0zgcv2q46qyqv4dhbd33s4044zjw38w8dqfpzs0c1lxjpkil3dnx"; depends=[]; }; - opitools = derive2 { name="opitools"; version="1.0.3"; sha256="15hafkkcyk7rh6cz9bhzlqdcmmkqp6051811ic5mzwn0x9chf0hb"; depends=[cowplot dplyr ggplot2 likert magrittr purrr stringr tibble tidyr tidytext]; }; - oppr = derive2 { name="oppr"; version="1.0.2"; sha256="1swwb0p7lwladircp2zm78yhjy6kkl7r3j3sh0wf0zq3rqyj8qkh"; depends=[ape assertthat cli ggplot2 lpSolveAPI magrittr Matrix proto Rcpp RcppArmadillo RcppProgress tibble tidytree uuid viridisLite]; }; + opitools = derive2 { name="opitools"; version="1.8.0"; sha256="1w5s78dxz03asxc46mn5vy9y21dr6km12ms563cgcaf9g9rw9dqc"; depends=[cowplot dplyr forcats ggplot2 likert magrittr purrr stringr tibble tidyr tidytext tm wordcloud2]; }; + oppr = derive2 { name="oppr"; version="1.0.3"; sha256="1j1zwy73k2hjap22df16cr80vifq8jdl7sqd8mjk1gqa25nwfp27"; depends=[ape assertthat cli ggplot2 lpSolveAPI magrittr Matrix proto Rcpp RcppArmadillo RcppProgress tibble tidytree uuid viridisLite withr]; }; optAUC = derive2 { name="optAUC"; version="1.0"; sha256="0j1llzqa3n7kqw3i5bb7284z0hi6s5jbjfl9zap0l7xf6hg4x1dn"; depends=[MASS]; }; optBiomarker = derive2 { name="optBiomarker"; version="1.0-28"; sha256="10i9ir0056qxyiayg10v6v25m1b94m1wd7c8ssigiqjhjncpddw5"; depends=[e1071 ipred MASS Matrix msm randomForest rgl rpanel]; }; optCluster = derive2 { name="optCluster"; version="1.3.0"; sha256="0vzdd9awxli0zzyh2xb7j7wxza3fz5awyz6bjwf13qbjrrq43q2q"; depends=[cluster gplots kohonen MBCluster_Seq mclust RankAggreg]; }; - optDesignSlopeInt = derive2 { name="optDesignSlopeInt"; version="1.1"; sha256="0vpm4359rq5v231k63vgaac6iv2ybfkcpy59n86djb710b3h2qcn"; depends=[MCMCpack neldermead]; }; optR = derive2 { name="optR"; version="1.2.5"; sha256="0q7jf4m0gzm11izl5lff17pvr855smqmc6zzi1bc7m6h3z865l32"; depends=[]; }; optband = derive2 { name="optband"; version="0.2.1"; sha256="1rv4r7h7x3xipav917cz9bcr6nqjzbinfrqxv8mcls9gdl9ha3y9"; depends=[LambertW]; }; optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; @@ -12674,18 +13198,17 @@ in with self; { optimParallel = derive2 { name="optimParallel"; version="1.0-2"; sha256="178ayfaivkbxkghxbg97lx4gl27kxkmgaaw9y8q5206r4cncd6qg"; depends=[]; }; optimStrat = derive2 { name="optimStrat"; version="2.3"; sha256="1jkwhgpw7nknd7h8c01z25x566bw2qb388i6g5nwcygxsshdgpri"; depends=[cubature mvtnorm shiny]; }; optimalThreshold = derive2 { name="optimalThreshold"; version="1.0"; sha256="1m39q36p7i7z31b90awriq5jf9rfybyw5lj3m1w33v2ssipkzp1n"; depends=[ars coda HDInterval mgcv rjags]; }; - optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; + optimall = derive2 { name="optimall"; version="0.1.0"; sha256="09vcznvfcgal1cr17byw6c2kwkch6q9v32wvdxyjxrykc5y45hip"; depends=[dplyr glue magrittr rlang tibble]; }; optimization = derive2 { name="optimization"; version="1.0-7"; sha256="09s62ax3w8zijfp2cmh2lvdqbl3nijbjkwq4n3icasi53lzg2179"; depends=[colorspace Rcpp]; }; optimos_prime = derive2 { name="optimos.prime"; version="0.1.2"; sha256="1a76gfzpd2s4gq15cd3frndak7wc6q3xqh9sllkk665031fx6z1h"; depends=[ggplot2 plotly tidyverse]; }; optimr = derive2 { name="optimr"; version="2019-12.16"; sha256="003wz9r3xdi47ad22l4dkhp0dalknb2s9fp82yamjx7x1xbfvcbk"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; }; - optimsimplex = derive2 { name="optimsimplex"; version="1.0-7"; sha256="1if32133556zwmijlz6085fg1h65442hy03lzia0ahap3yndqfqy"; depends=[optimbase]; }; optimus = derive2 { name="optimus"; version="0.2.0"; sha256="01njyjfrm6kjwx2qq41c0hsgxzydnrmr3538cpbfdn5i0z5blgyx"; depends=[mvabund ordinal]; }; - optimx = derive2 { name="optimx"; version="2020-4.2"; sha256="00bi2sr2hr7x6cfwlsn7hz2r56lcyv9naa8vmfcgr1r269fc50b3"; depends=[numDeriv]; }; + optimx = derive2 { name="optimx"; version="2021-6.12"; sha256="059md564p2pk5nis9kbcn1kw2fw130vg53fxlr5xzpv1c9gfhq3k"; depends=[numDeriv]; }; optinterv = derive2 { name="optinterv"; version="0.1.0"; sha256="1yvjb9fyqj3pfglfdwdq4kpw9i5g5i3klgpqb05xdnacbnpdxvmp"; depends=[boot distances Hmisc lattice pbapply rootSolve weights]; }; optional = derive2 { name="optional"; version="2.0"; sha256="0hj0gwvk9svllv44kfdgv3a2mriwqnaxvn3rj7w1djha7mryl6jl"; depends=[magrittr]; }; optionstrat = derive2 { name="optionstrat"; version="1.4.1"; sha256="0vidaf888zdls5yxy7637fqg6r39l3rxw9bhn16s4xmag7kawljv"; depends=[]; }; optiscale = derive2 { name="optiscale"; version="1.2.2"; sha256="1ay2lfk4isv0gir5diwxlx4ml5bv5qyqbwm34py85fp6bh92987r"; depends=[lattice]; }; - optmatch = derive2 { name="optmatch"; version="0.9-13"; sha256="1n6h6j0rk750jqxwxkbzdid1ig5xp8xpjw356xrqg02wm7x2gwzq"; depends=[digest Rcpp RItools survival]; }; + optmatch = derive2 { name="optmatch"; version="0.9-15"; sha256="1n4ifrb2mvvvjp3q0slfqqx3ly9jlcsdg5x00dkg3drrv6zgs03m"; depends=[digest Rcpp RItools survey survival]; }; optparse = derive2 { name="optparse"; version="1.6.6"; sha256="1l301dy3gc8pn7j00awcjh41wmc1ks9kswak255kbsa6f54rsxsi"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="3.0-3"; sha256="18h659gbgzflq81lcchc058xjgljkmhpsjkh51ylygwrv1qjrz2i"; depends=[cluster labdsv MASS plotrix]; }; optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; }; @@ -12698,21 +13221,20 @@ in with self; { orclus = derive2 { name="orclus"; version="0.2-6"; sha256="0d78mn2vl2yxlvdswyxkxp9zg59b8cvfksz9m56kddn79aps1ikl"; depends=[]; }; orcutt = derive2 { name="orcutt"; version="2.3"; sha256="0pj7pqzbcg4gp35nsz3avyawmx69dgj0l2w0x8ypw5qwl4zhmnyk"; depends=[lmtest]; }; ordDisp = derive2 { name="ordDisp"; version="2.1.1"; sha256="0906y98ydiadyqhz9ad2ssw1282a10c418k20vkbwzad2xip7grg"; depends=[VGAM]; }; - ordPens = derive2 { name="ordPens"; version="0.3-1"; sha256="0yzf3qzi4p7xqimihjvr0wkdvj3sy9n3wc86bf4bjbavniq6m69r"; depends=[grplasso mgcv RLRsim]; }; + ordPens = derive2 { name="ordPens"; version="1.0.0"; sha256="1q6v3xkaahpzkycjnn75a62narwj4g86ha9m786nfp941ql44vlr"; depends=[glmpath grplasso mgcv quadprog RLRsim]; }; ordcrm = derive2 { name="ordcrm"; version="1.0.0"; sha256="1hy24s23l099b21w5j3p2f0748s8xmhxhslfp65fg7ycwda5qsyw"; depends=[rms]; }; - orddom = derive2 { name="orddom"; version="3.1"; sha256="165axs15fvwhrp89xd87l81q3h2qjll1vrwcsap645cwvb85nwsh"; depends=[psych]; }; orderbook = derive2 { name="orderbook"; version="1.03"; sha256="0dlvjrzdhhh8js4g1lvxs46q7fdxfxavxnb4nj6xlwca75i51675"; depends=[hash lattice]; }; ordering = derive2 { name="ordering"; version="0.7.0"; sha256="0sgwgcjg6sazmi11c9qvxfrzg671kcp18i2q20xbmbj4v3yqhwbh"; depends=[]; }; - orderly = derive2 { name="orderly"; version="1.0.4"; sha256="0z83aha45nhi7mym1mygp60jim8znyknmc254gd2cvmg7cmifzb7"; depends=[DBI digest docopt fs ids R6 RSQLite withr yaml zip]; }; - orders = derive2 { name="orders"; version="0.1.5"; sha256="0g5rxlbgf3i34xgrn4vhbha7svlqy7jc9hhznjikb1v5wc5zc39d"; depends=[gamlss_dist Newdistns]; }; + orderly = derive2 { name="orderly"; version="1.4.3"; sha256="0k7xk64schhw9jdbg50hlnf6gfhlgnv1n20rz3fga02z38441xkn"; depends=[crayon DBI digest docopt fs gert ids R6 RSQLite withr yaml zip]; }; + orders = derive2 { name="orders"; version="0.1.6"; sha256="0b1ysq22qhdzs5fb63m786iil0rkb9qsj9p730izn7dg3zx36gl1"; depends=[actuar gamlss_dist Newdistns]; }; orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; ordinal = derive2 { name="ordinal"; version="2019.12-10"; sha256="09bpmjmbf4x82kgf6bm4bkncq2apdv9mk20zj4zgma2jx2vyfhbs"; depends=[MASS Matrix numDeriv ucminf]; }; ordinalClust = derive2 { name="ordinalClust"; version="1.3.5"; sha256="0hmqvhrmijgzanh08z5v82a07zl7xm69wl8zzj99fksahyrgxjdc"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; ordinalCont = derive2 { name="ordinalCont"; version="2.0.2"; sha256="1azwcr1si3b8dxf2y59d3rxw4msfq79khzg7zgqd0kbzyka4ygl8"; depends=[boot Deriv]; }; - ordinalForest = derive2 { name="ordinalForest"; version="2.4-1"; sha256="00w8jiz0260z4min2xxbg9dx2jiw99wyhgcxa11zhzzh91qvlf78"; depends=[combinat nnet Rcpp verification]; }; + ordinalForest = derive2 { name="ordinalForest"; version="2.4-2"; sha256="0s5isf8z6rrksl4jv1aizffxy3bcl726qjpj5j6z7642wkdkpygi"; depends=[combinat nnet Rcpp verification]; }; ordinalLBM = derive2 { name="ordinalLBM"; version="1.0"; sha256="1sfzkm3f9s5nbalakgk5v919wr7hdlr5p280rw2p8dy4wxr3xk3s"; depends=[RColorBrewer reshape2]; }; - ordinalNet = derive2 { name="ordinalNet"; version="2.9"; sha256="0jnyhm6appggywva2jx39xhk4967qkzc2q71fikm9c78p9znw2an"; depends=[]; }; + ordinalNet = derive2 { name="ordinalNet"; version="2.10"; sha256="0d2762scs1hwch5dc54dcin8j7ls9an69k68blabpcwq2i429ncz"; depends=[]; }; ordinalRR = derive2 { name="ordinalRR"; version="1.1"; sha256="1sfkq8gryyls22208ympw5scgb4jkd27pyc1qklw4x7cz9wfnfbp"; depends=[rjags]; }; ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.6"; sha256="0axpndyyns649mwifq8f16l8n8x9nic8cv8l71ljyr2gwlm0nqz0"; depends=[survival]; }; ordinalpattern = derive2 { name="ordinalpattern"; version="0.2.0"; sha256="0nf7323wd8wm4qxlhr6cvm1l87rwfdr5c4qivhncy0m2n5vknc1c"; depends=[gtools mvtnorm]; }; @@ -12725,8 +13247,10 @@ in with self; { orgutils = derive2 { name="orgutils"; version="0.4-1"; sha256="1yc3avhq3786his7nd60zfbzd9inkfrfz938r8378z59zbb1mzqq"; depends=[textutils]; }; orientlib = derive2 { name="orientlib"; version="0.10.4"; sha256="0lds3y05byag466asi8hmv1yfllsdx7z5i8hq21r6dx3w4n4f46x"; depends=[]; }; origami = derive2 { name="origami"; version="1.0.3"; sha256="034h9dnllzllqd0pzx2if69x17gaxfjrfi4ini6gh23asr3krls3"; depends=[abind assertthat data_table future future_apply listenv]; }; + origin = derive2 { name="origin"; version="0.5.3"; sha256="0am0ynjp1fpgqn7yfwc74wdq4xkg50mwjd0rscdyzhgqykq0y665"; depends=[rstudioapi]; }; orloca = derive2 { name="orloca"; version="4.10"; sha256="113y76gyhslpfyq7n1nnbgnxhxgr213f28vnc3n3b9pghkkr0p4z"; depends=[knitr png rmarkdown ucminf]; }; orloca_es = derive2 { name="orloca.es"; version="4.9"; sha256="00zb08dqcsh1ljl4f2djm1pwbrfbaddgapn3v8nascmwxlhb2hkw"; depends=[orloca]; }; + ormBigData = derive2 { name="ormBigData"; version="0.0.1"; sha256="1rq202k4assmij21bjjk1ba7121p5p3rp21k548cc6lk81xj1rcc"; depends=[benchmarkme doParallel foreach Hmisc iterators rms SparseM]; }; ormPlot = derive2 { name="ormPlot"; version="0.3.4"; sha256="1s38alb602javkizxp3gqkmsq6zvl983gv4bcgd8752fvvddbf4s"; depends=[ggplot2 gtable rms]; }; oro_dicom = derive2 { name="oro.dicom"; version="0.5.3"; sha256="1ar70xk2bqk7jgckfivgp4np3dxaynmgdg41n8x0sg9cpxl2lc38"; depends=[oro_nifti]; }; oro_nifti = derive2 { name="oro.nifti"; version="0.11.0"; sha256="1kmlc82gp02v4p62kaxvv55rizbs6znphr0dpka8fl4addgld4si"; depends=[abind bitops RNifti]; }; @@ -12743,35 +13267,36 @@ in with self; { oshka = derive2 { name="oshka"; version="0.1.2"; sha256="02hglpq5lknq93zbcf219lhnhppzgygkhxqixb15f89rxf9fczgs"; depends=[]; }; oskeyring = derive2 { name="oskeyring"; version="0.1.1"; sha256="04i5nbgwwwsi0g94kyyhh29jsfn9jzjn6ihpj0ah8vj6yama152b"; depends=[]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; - osmdata = derive2 { name="osmdata"; version="0.1.5"; sha256="1j3zff185s9lgam4fk8md8by1apf3z6q56a0rg6yi26nfl8ly2i3"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; - osmextract = derive2 { name="osmextract"; version="0.2.1"; sha256="0p0zy1vlshdk9a1npjr6ij47q61yq3f0bv1p245bf3ifw8n52wf1"; depends=[sf]; }; + osmdata = derive2 { name="osmdata"; version="0.1.6"; sha256="1zigaq3akpnhph8ban85r362l8dgcw5a3x0xsr78b1bmdlz13fh3"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp tibble xml2]; }; + osmextract = derive2 { name="osmextract"; version="0.3.1"; sha256="0b4488nphzjv8sp2y19sn930zfsd7lxqqnpzg612m39bzz84vcbr"; depends=[sf]; }; osmgeosample = derive2 { name="osmgeosample"; version="0.1"; sha256="1vcdisf147mcdqkc35czcphjh6rhaix9vy6l5inknaarmmajri3x"; depends=[dplyr geoR mapview nngeo osmdata pdist processx qpdf Rcpp rgdal sf sp splancs tibble]; }; osmose = derive2 { name="osmose"; version="3.3.4"; sha256="144mklbish59amzz7j95qmn98yqlz3bqzd2rp03wg9f5s69bxjj6"; depends=[fields knitr mgcv ncdf4 rlist rmarkdown stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.3"; sha256="0p94phv7jn0q9k25300zz59ldfphm9xgy6i7n3r8xj4zay0c7mf2"; depends=[e1071 ggm ggplot2 mapproj osmdata rgeos sp spatstat spatstat_core spatstat_geom]; }; osqp = derive2 { name="osqp"; version="0.6.0.3"; sha256="1266n04c8zsv4ixf7y25jkccv9lx3rvmd7bnkxynbwga9psd3l0j"; depends=[Matrix R6 Rcpp]; }; osrm = derive2 { name="osrm"; version="3.4.1"; sha256="1445ak76jp5nym80cv33rbimcj4am6jj6858sag28r2bg1jxf4dj"; depends=[curl googlePolylines isoband jsonlite sf sp]; }; - osrmr = derive2 { name="osrmr"; version="0.1.35"; sha256="1pmsybyqkgpqz0yhfmwrsa2smgmclxzk9mlzcqmm8ph6dcd1x0s8"; depends=[assertthat bitops R_utils rjson stringr]; }; + osrmr = derive2 { name="osrmr"; version="0.1.36"; sha256="1vnf6g1d9fjckz9ay910nb9gr1km2adwk3b0k460mxvpr36izkh7"; depends=[assertthat bitops R_utils rjson stringr]; }; ot = derive2 { name="ot"; version="0.2.0"; sha256="0lym92hsxhfjdkh738rxlpkq084454055vgxm2b4wdhqw00jwf5y"; depends=[]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; otp = derive2 { name="otp"; version="0.1.0"; sha256="0l0r56kn8jmjxhzz646fimi91blpgpynrrgfd03rh3dbifd5xhdz"; depends=[base64url openssl R6]; }; otpr = derive2 { name="otpr"; version="0.5.0"; sha256="050w7b9b14w03agahfy2n6y5fpk2y5hp501dnlbxzzj66a714v4h"; depends=[checkmate dplyr geojsonsf httr janitor jsonlite rlang rrapply sf urltools]; }; - otrimle = derive2 { name="otrimle"; version="1.6"; sha256="08s46d5mjkrr2wc91hyrjymay34283vi6pz9lrr09dn0870vrhmw"; depends=[doParallel foreach mclust]; }; + otrimle = derive2 { name="otrimle"; version="2.0"; sha256="0rca8ln9cyikfpsf1af550cfx2zx110c8jxv64xf8dnnd09s9h7b"; depends=[doParallel foreach mclust mvtnorm robustbase]; }; otsad = derive2 { name="otsad"; version="0.2.0"; sha256="1jb6raxm70aywbgs7bdyw8vccy1nj924f4hkpjrlgnvzmy0hyhvs"; depends=[ggplot2 plotly reticulate sigmoid]; }; otuSummary = derive2 { name="otuSummary"; version="0.1.1"; sha256="04l667qmp7wqkbdsk87j92gf89s13090kzs8cjlmxsp6i69r34z2"; depends=[reshape2 vegan]; }; otvPlots = derive2 { name="otvPlots"; version="0.2.1"; sha256="0fjx0kl9y77mazwy7lg4mxc9sg8ysvvbl4h3k6bvfpnjm5x62hff"; depends=[data_table ggplot2 gridExtra Hmisc moments quantreg scales stringi]; }; - ouch = derive2 { name="ouch"; version="2.16"; sha256="17y7qksp9v4jkr4h1psg14y3ridwhi4mgkfm0a02paabhwjc8d96"; depends=[subplex]; }; + ouch = derive2 { name="ouch"; version="2.17"; sha256="1a7r24j59xz3lxa5wc694j6b80j8m5l86zd1sw9pvs66l8gd98kf"; depends=[subplex]; }; outForest = derive2 { name="outForest"; version="0.1.1"; sha256="183chvs5d5bb0qdgw1gxllb2ibjwyzyfn00fjjwnycald65figm3"; depends=[FNN missRanger ranger]; }; outbreaker2 = derive2 { name="outbreaker2"; version="1.1.2"; sha256="0za20xl76i17pi2w2l69yiqrhfiichk4mngn062vv1hvqz4qgx4r"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; outbreaks = derive2 { name="outbreaks"; version="1.9.0"; sha256="0x6r4rzcvd1rp8j4brq9c0zl2xsl5jfi18dny20an7aqk310p11v"; depends=[]; }; outcomerate = derive2 { name="outcomerate"; version="1.0.1"; sha256="07mwml7r98qjgvrp938sqf7klyspz110583j0zwb72j69n4whmrj"; depends=[Rdpack]; }; + outlierensembles = derive2 { name="outlierensembles"; version="0.1.0"; sha256="0m2iaf3rbpwvyrjz6qglbrinmz676hnbqqm6vc38zb3k3cjcllaq"; depends=[airt apcluster EstCRM psych]; }; outliers = derive2 { name="outliers"; version="0.14"; sha256="0vcqfqmmv4yblyp3s6bd25r49pxb7hjzipiic5a82924nqfqzkmn"; depends=[]; }; - outliertree = derive2 { name="outliertree"; version="1.7.1"; sha256="0hz7rji34147516r0lh9zs70n0pq7n7ihin3xsj1rxsysz06zgc1"; depends=[Rcereal Rcpp]; }; + outliertree = derive2 { name="outliertree"; version="1.7.6"; sha256="1634wm2diawsppb8j3sfcnnp44ik5npmcx0lrd343a9c89xb7z98"; depends=[Rcereal Rcpp]; }; outreg = derive2 { name="outreg"; version="0.2.2"; sha256="04f1x7mxq4swbd7bfwjjgx4838jm6qj4piaighmhcscwrdkxa1cp"; depends=[magrittr reshape2 sandwich stringr tidyr]; }; outsider = derive2 { name="outsider"; version="0.1.1"; sha256="082yygvjs31clz8b3p59gkc26249gqp8hl1071gm6zi4vi2ng43x"; depends=[crayon curl jsonlite outsider_base remotes tibble yaml]; }; outsider_base = derive2 { name="outsider.base"; version="0.1.4"; sha256="1wlr3a14a330r9p4lahdmgs4hbgfsp05rsbzr30djwpv21bfl03a"; depends=[callr cli crayon devtools pkgload sys tibble yaml]; }; ouxy = derive2 { name="ouxy"; version="2.1"; sha256="0mdjxg7wm68882hbwl0gg15dld6f90xyf0s6hk2z90r34bvyky0i"; depends=[abc adephylo ape coda EasyABC geiger maps MCMCpack nlme phytools Sim_DiffProc TreeSim]; }; overdisp = derive2 { name="overdisp"; version="0.1.1"; sha256="0gncmirpiqyxsgpsdrv875i6a9bagpz76vcbqxsaql537m1fd99r"; depends=[]; }; - overlap = derive2 { name="overlap"; version="0.3.3"; sha256="17cnr4qin1qy0df4k491267acna12gpbbps6w3gi8nccqxfrb1pd"; depends=[]; }; + overlap = derive2 { name="overlap"; version="0.3.4"; sha256="1arxprhz035ab78ks88n6scwnlwmnb97mlac5gsx90ipb6gkgcyk"; depends=[]; }; overlapping = derive2 { name="overlapping"; version="1.6"; sha256="0qy5jw4nn4l6rb36sxd9waz7x4g18q42dsk12hvsnan5jyzcdwfn"; depends=[ggplot2 testthat]; }; overlapptest = derive2 { name="overlapptest"; version="1.2-4"; sha256="148vswcvy0anw6xrpfsskjn0i7jkn0jbfqlaf4bb13pkini2bahf"; depends=[spatstat_geom]; }; overture = derive2 { name="overture"; version="0.4-0"; sha256="1s16x5kn0apb0w1f7hqzcsqvw3x621y5n6yr1qn7yb7431pdw3cz"; depends=[bigmemory]; }; @@ -12780,24 +13305,24 @@ in with self; { owdbr = derive2 { name="owdbr"; version="1.0.1.1"; sha256="0q4654zr5aw04sssy7127vafry72b7p3d8i44fqvqg3055awin0i"; depends=[data_table dplyr httr jsonlite magrittr tibble]; }; owmr = derive2 { name="owmr"; version="0.8.2"; sha256="0qlb5aw6n06yf8y2gd2fjp8kp3w0xgqh3fka7rxqndgvaqmin1a6"; depends=[httr jsonlite magrittr plyr tibble tidyr]; }; ows4R = derive2 { name="ows4R"; version="0.1-5"; sha256="0zl6nvcrzjcaz43ji2a6ym3mvfzfvf8lyb29hg8sidribr6js3nk"; depends=[geometa httr openssl R6 rgdal sf XML]; }; - oxcAAR = derive2 { name="oxcAAR"; version="1.1.0"; sha256="0jy0vjiyb02nc2nrc4psnzcrwr00wvjmx2lpkb00fnh1zm69sf0x"; depends=[jsonlite stringi stringr]; }; + oxcAAR = derive2 { name="oxcAAR"; version="1.1.1"; sha256="1szifw978qr7v8n178jhg4ap2jwvfnwjl2izbbiydwx8q1fyj2q4"; depends=[jsonlite stringi stringr]; }; oxcgrt = derive2 { name="oxcgrt"; version="0.1.0"; sha256="006kdggqdy7nkllln5p7fsapmmn5wlampyw2ifc4ls9jbz0p5h16"; depends=[countrycode dplyr jsonlite magrittr stringr tibble tidyr]; }; - oxcovid19 = derive2 { name="oxcovid19"; version="0.1.2"; sha256="0ax6vg1mcgj03zy47d8pcmlbn538lxhx0l4n9cpqknd7g76l018i"; depends=[countrycode DBI dbplyr dplyr lubridate magrittr RPostgres sf]; }; oysteR = derive2 { name="oysteR"; version="0.1.1"; sha256="11zg959h9104hh8wid4003s8c4z9xhmicj39cc5vq1j8g1g7ilr7"; depends=[cli dplyr glue httr jsonlite purrr rjson rlang stringr tibble tidyr yaml]; }; oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; - ozmaps = derive2 { name="ozmaps"; version="0.4.0"; sha256="1znmji1z7x1vmalchvsfdpw8zh1kv7vb42y4pa7rlvk9cz6plw29"; depends=[oz sf tibble]; }; + ozmaps = derive2 { name="ozmaps"; version="0.4.5"; sha256="0sqxaiw1mdcg81228g7k7r6fla6d7hfk9ax2z6pws8457xbvrzka"; depends=[oz sf tibble]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; p3state_msm = derive2 { name="p3state.msm"; version="1.3"; sha256="0gbrka62ylxx64r3abpk60y92k2lk5smlf8na68qazph8llsl2rv"; depends=[survival]; }; pAnalysis = derive2 { name="pAnalysis"; version="2.0"; sha256="0pykdlbynzgcbnjs8xs8frgncf53l8qgf6na34adq7da76n570hi"; depends=[coin ggplot2]; }; - pBrackets = derive2 { name="pBrackets"; version="1.0"; sha256="0cwv609hzp8anfv3cgfbspz8w0g1ljfz05wm4xfhwy15v32fckrj"; depends=[]; }; + pBrackets = derive2 { name="pBrackets"; version="1.0.1"; sha256="1rhsl59wqplpx4iavhm133fywkjdsbxw1x60fz22hby0cc9ckg6i"; depends=[]; }; pCODE = derive2 { name="pCODE"; version="0.9.3"; sha256="067hhlj75l04b404fidvb2rkj6bb3zxrjy37p5vzvc5a1p1pcnf5"; depends=[deSolve fda MASS pracma]; }; pCalibrate = derive2 { name="pCalibrate"; version="0.2-1"; sha256="0gi4hjnykn4gbj9krmw4z1qy4lbxkvacczkks3zkwalw9ylwkpxl"; depends=[exact2x2 MCMCpack]; }; pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; pGPx = derive2 { name="pGPx"; version="0.1.1"; sha256="0b3pjrk7496nlw1cv5m6yfp02c663452z67y21yhhm26b17nrldv"; depends=[DiceKriging KrigInv pbivnorm pracma randtoolbox Rcpp RcppArmadillo rgenoud]; }; pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; - pROC = derive2 { name="pROC"; version="1.17.0.1"; sha256="1gd6a47d6bcfd237s3g7r9rws8x2sg7zrvq5k6clpc41zdpp4712"; depends=[plyr Rcpp]; }; + pROC = derive2 { name="pROC"; version="1.18.0"; sha256="1abvbzdss12n64pp9vlgnn0q3abh0nj4n0a8cinwwvhphjrm9vym"; depends=[plyr Rcpp]; }; pRSR = derive2 { name="pRSR"; version="3.1.1"; sha256="1irx95b7cwvx3gpn9brjjn4k947m8frz542r18nilc9f1159mb3s"; depends=[]; }; + pRecipe = derive2 { name="pRecipe"; version="0.1.0"; sha256="0lsycd7p2cg8p16x1426iwd1n97dpiizq2ggl7x4fl4q6gvazywr"; depends=[curl data_table dplyr gdalUtils getPass ggplot2 hdf5r lubridate ncdf4 R_utils raster rgdal sp stringr viridis zoo]; }; pa = derive2 { name="pa"; version="1.2-1"; sha256="1pfgzxirkb0p8f6smjlrbp1qpsh0vsvqf306cvldaj9zx8cw0q9f"; depends=[ggplot2]; }; pacbpred = derive2 { name="pacbpred"; version="0.92.2"; sha256="13p405vh9rf1r5idxl5payc85vwlzcd87wm15163vc9gmil1ncsf"; depends=[]; }; pack = derive2 { name="pack"; version="0.1-1"; sha256="0x4p8clwp49s2y67y7in530xwhjngnqwagf9xnyb1jp0z3myd3r7"; depends=[]; }; @@ -12807,27 +13332,28 @@ in with self; { packMBPLSDA = derive2 { name="packMBPLSDA"; version="0.8.0"; sha256="0jn47zhcfssa2rwjh8jc2zc93g766pslxx8vjm0bsnzyzjl2yqb9"; depends=[ade4 DiscriMiner doParallel FactoMineR foreach MASS pROC]; }; packS4 = derive2 { name="packS4"; version="0.9.3"; sha256="0kkh4lfdbr2ydyfpymwrdkms1d4mj8430p6vxvj5wrgl4vh85gwd"; depends=[codetools]; }; packageDiff = derive2 { name="packageDiff"; version="0.1"; sha256="0qxgx2ac0x7p9j9clj7hgjahf7xwzcjkcw0d2n6w0r9c4g0mw9w2"; depends=[diffr htmlwidgets]; }; - packageRank = derive2 { name="packageRank"; version="0.4.2"; sha256="112nnnf9av4ms02wp6cvbhnny81jij27hv9375rrvk7wv8dkmbrc"; depends=[cranlogs data_table ggplot2 memoise pkgsearch R_utils RCurl rversions sugrrants]; }; + packageRank = derive2 { name="packageRank"; version="0.5.0"; sha256="1w5vfz10wjf5h95czi93lbkw4hd486sfg6fxq245fk5r7cpbkpx1"; depends=[cranlogs data_table ggplot2 memoise pkgsearch R_utils RCurl rversions sugrrants]; }; packagefinder = derive2 { name="packagefinder"; version="0.3.2"; sha256="1jskq7w26bjpam1hvyjcmmw08wz2qfzbyhxi5cdkfiiwqy15xkc1"; depends=[clipr crayon formattable htmlTable httr jsonlite lubridate pander reactable rstudioapi shiny shinybusy shinyjs stringr textutils tidyr]; }; - packager = derive2 { name="packager"; version="1.11.1"; sha256="0rr1jsimgcncpxd8vnqlbr0f8jddz6jks4g1qyylgxjyndivx298"; depends=[callr checkmate codetools crayon cyclocomp desc fakemake fritools fs gert httr pkgbuild pkgload rcmdcheck remotes rhub rprojroot whisker whoami]; }; + packager = derive2 { name="packager"; version="1.13.0"; sha256="14alsx5dkipj2y69kx6ps6ks0v0yymhnv41zcql11fnj5rxcdyci"; depends=[callr checkmate codetools crayon cyclocomp desc fakemake fritools fs gert httr pkgbuild pkgload rcmdcheck remotes rhub rprojroot tinytest whisker whoami]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.3.4"; sha256="05pv5c4k4njkr0xw6i6ksiy34hcyx2lbiqpv5gxw81yrkm0rxfyk"; depends=[Rcpp]; }; - packer = derive2 { name="packer"; version="0.0.6"; sha256="0kskfkvpb5x6k3xjljlxjgzymarjsld8gmxq1pxkzmqwydxm1jx8"; depends=[assertthat cli fs htmlwidgets jsonlite rprojroot rstudioapi usethis]; }; - packrat = derive2 { name="packrat"; version="0.6.0"; sha256="01cn2vf95nc8bh0hh8imkn030yra3hx64q1fb8jwsr52p9s397fr"; depends=[]; }; + packer = derive2 { name="packer"; version="0.1.1"; sha256="0hvvppkvid0lw93kb238bs22d60l8mf6phh15q9mblsz1gcqxva3"; depends=[assertthat cli fs htmlwidgets jsonlite rprojroot rstudioapi usethis]; }; + packrat = derive2 { name="packrat"; version="0.7.0"; sha256="1hnwhdgqljqs3m7c4rjlyndyc0k85jpa4rbfymxkm3zjg3yy3g78"; depends=[]; }; pacman = derive2 { name="pacman"; version="0.5.1"; sha256="0z7gngd6h83cpjhq1vg75wvzhdjbgjh7gj5d4zvvi9gd2lmagjcy"; depends=[remotes]; }; paco = derive2 { name="paco"; version="0.4.2"; sha256="0p02fdc5f7d7sbdvxill8jln76p1ndiw95k6s9j41slfriq647vd"; depends=[ape plyr vegan]; }; pacotest = derive2 { name="pacotest"; version="0.4.0"; sha256="1m52spl856agk5y00s6d7n07sjv775calgpksajdsn1ipjfxs5nk"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; + pacs = derive2 { name="pacs"; version="0.3.5"; sha256="0a8k6i7v26r4njbpcy3zp556kxn1p9rx6v7375k1r4w2b49jba6k"; depends=[memoise stringi xml2]; }; pacviz = derive2 { name="pacviz"; version="1.0.1"; sha256="0afh10zf32lk6gh42y6mjfgdw2blhjavhbq2n3s8h62w9blfad5g"; depends=[circlize e1071 plotrix]; }; padr = derive2 { name="padr"; version="0.5.3"; sha256="1kf457yrdwyl3vkc1y6bzlg8ag11pfzsrjqjnbp3v1vlx2ib4vz7"; depends=[dplyr lubridate Rcpp rlang]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; pafdR = derive2 { name="pafdR"; version="1.0"; sha256="1yimsd4h23hcf752p5flda3dqk8hgn6qm9k0pmbapxj4jbsw14w5"; depends=[curl exams stringr]; }; pafr = derive2 { name="pafr"; version="0.0.2"; sha256="0ali4m1pv73y88x1dk5rvmg1ysy48janjnc1hnqfcndszfz2b0wm"; depends=[dplyr ggplot2 rlang stringr tibble]; }; - pagedown = derive2 { name="pagedown"; version="0.14"; sha256="01r565x053cy7gncc26bdfl6fji2ammy2a8pbwhy70y7r425vvsz"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; - pagemap = derive2 { name="pagemap"; version="0.1.1"; sha256="1lf1ppifnnr7j63ii8ihi0x1rw1h7ls8nzxqnkmwnzha3dkhs4nz"; depends=[htmlwidgets]; }; + pagedown = derive2 { name="pagedown"; version="0.15"; sha256="11ixd1fqkqfjjpc8ga8rmivfh3isrblzfkl7fy87lkf6jd6zfbk1"; depends=[bookdown htmltools httpuv jsonlite later processx rmarkdown servr websocket xfun]; }; + pagemap = derive2 { name="pagemap"; version="0.1.3"; sha256="1rwspbk7xmp27iadrd1471a7z71qyzlb0vnkw4ssjk7wi8q48fnj"; depends=[htmlwidgets]; }; pagenum = derive2 { name="pagenum"; version="1.2"; sha256="0nid26wmrm76ifxqpqqry232q4alf80i7df1rg237qil8asx06k1"; depends=[]; }; pageviews = derive2 { name="pageviews"; version="0.5.0"; sha256="1fhlm2y288wx625y0glxybjb0xv9sqvvln35jqlwqq38h3grcpqd"; depends=[curl httr jsonlite]; }; - pagoda2 = derive2 { name="pagoda2"; version="1.0.3"; sha256="1p0chdlsycb3040lg22jqd3r0qivava2wx797rmiz7q6ms30npi9"; depends=[dendsort drat fastcluster igraph irlba magrittr MASS Matrix mgcv N2R plyr R_utils R6 Rcpp RcppArmadillo RcppEigen RcppProgress rjson rlang RMTstat Rook Rtsne sccore urltools]; }; - pagoo = derive2 { name="pagoo"; version="0.3.8"; sha256="07m8gg5qks7k65dc9xk0zgzznqbn3v3wr2pn2fk79lmy86m224af"; depends=[BiocGenerics Biostrings dendextend DT GenomicRanges ggfortify ggplot2 heatmaply magrittr plotly R6 reshape2 S4Vectors shiny shinydashboard shinyWidgets vegan]; }; + pagoda2 = derive2 { name="pagoda2"; version="1.0.5"; sha256="1i2z69rrik3sy38j9xs840xpidirxfdm5g60ynx3lcigvlj22rkb"; depends=[dendsort drat fastcluster igraph irlba magrittr MASS Matrix mgcv N2R plyr R_utils R6 Rcpp RcppArmadillo RcppEigen RcppProgress rjson rlang RMTstat Rook Rtsne sccore urltools]; }; + pagoo = derive2 { name="pagoo"; version="0.3.9"; sha256="0z8k7hcnc4galr1afwk7zjdjbn298jgzawc09afq6pnhl5mjiya0"; depends=[BiocGenerics Biostrings dendextend DT GenomicRanges ggfortify ggplot2 heatmaply magrittr plotly R6 reshape2 S4Vectors shiny shinydashboard shinyWidgets vegan]; }; painter = derive2 { name="painter"; version="0.1.0"; sha256="0qr6p13h50rlavcsamxmijfr4dfrbv1k088m28qf8a4gam3ap85b"; depends=[]; }; paintmap = derive2 { name="paintmap"; version="1.0"; sha256="1qw5725yjymxmfhffqjx4lbmzj437c7qwr8xrzmf52f0m28nl3vk"; depends=[]; }; pairedCI = derive2 { name="pairedCI"; version="0.5-4"; sha256="03wf526n3bbr2ai44zwrdhbfx99pxq1nbng9wsbndrdg2ji4dar2"; depends=[]; }; @@ -12835,7 +13361,7 @@ in with self; { pairsD3 = derive2 { name="pairsD3"; version="0.1.0"; sha256="0ql6pqijf24pfyid52hmf5fmh4w1ca3sm47z9vknqpnjbn47v8q2"; depends=[htmlwidgets shiny]; }; pairwise = derive2 { name="pairwise"; version="0.5.0-2"; sha256="1h1rqh3c40am73zsg4k8zwb14jipjl2pn2znippsnz3sn6plvm8g"; depends=[]; }; pairwiseCI = derive2 { name="pairwiseCI"; version="0.1-27"; sha256="0yp9nibdrsddjqq6vdlfbpvmfgm209h99b6qqqd6wgfzng327822"; depends=[boot coin MASS MCPAN mcprofile]; }; - pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="3.1.5"; sha256="1nxmadamc7411jwif3rxprsvnc3j6n5dwzz20f3gacc18k9arxk6"; depends=[BayesFactor dplyr insight ipmisc parameters PMCMRplus purrr rlang WRS2]; }; + pairwiseComparisons = derive2 { name="pairwiseComparisons"; version="3.1.6"; sha256="0aiq8gr33pr5lia6cf6ak7zy5z81am5j5a0py0a2m9ljgmsgmn4s"; depends=[BayesFactor dplyr insight ipmisc parameters PMCMRplus purrr rlang WRS2]; }; pak = derive2 { name="pak"; version="0.1.2.1"; sha256="07x5wa7mkhlzyl6hih9wv91ykjanhh35ng3p439wmxgz6dcdv6sp"; depends=[assertthat base64enc callr cli cliapp crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble]; }; palaeoSig = derive2 { name="palaeoSig"; version="2.0-3"; sha256="1sn2nbiq037l81qvrqbg7gf1312g8vy574hsfng07qk1jpx7vwkk"; depends=[assertr dplyr forcats ggplot2 ggrepel magrittr MASS mgcv purrr rioja rlang TeachingDemos tibble tidyr vegan]; }; palasso = derive2 { name="palasso"; version="0.0.8"; sha256="0cgxfzhp394c8xprc2k0qx9c274bbp0cpazk7xilfrgcgk08156i"; depends=[glmnet Matrix survival]; }; @@ -12846,45 +13372,46 @@ in with self; { paleomorph = derive2 { name="paleomorph"; version="0.1.4"; sha256="05l55miahkmj8ikq8qz20y6kgxvxmdf04kji898i7fp8qyj4vfpa"; depends=[]; }; paleopop = derive2 { name="paleopop"; version="2.1.1"; sha256="1gpq66v538y5a7hjl8s985cz95kszzfghi0c7hsbdgym2j580mm8"; depends=[poems R6 sf trend]; }; paleotree = derive2 { name="paleotree"; version="3.3.25"; sha256="04l7mh198sm1j8b75ydm7sq55l3nnwns29wj8cli4n3m009bjr5a"; depends=[ape jsonlite phangorn phytools png RCurl]; }; - paletteer = derive2 { name="paletteer"; version="1.3.0"; sha256="11xlqx3mr71iij7lagddgd20s9qvhfmr5f9zvjfg63vfjiinw6sv"; depends=[prismatic rematch2 rlang rstudioapi]; }; + paletteer = derive2 { name="paletteer"; version="1.4.0"; sha256="1m0h1p0cbmmi0rk157qyrgcz57pw0syadskrnfa4vs7hm1rndp3m"; depends=[prismatic rematch2 rlang rstudioapi]; }; palettesForR = derive2 { name="palettesForR"; version="0.1.2"; sha256="0nkb0dszj3a9ba7w6kfyn8lxacqsjw60i87p3g2gyl098kjwv7qv"; depends=[]; }; palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; palm = derive2 { name="palm"; version="1.1.4"; sha256="1h323py9dgdymih9j2wk4r1kib767z7z84h2c3albxxf9b2hvq4f"; depends=[gsl minqa mvtnorm R6 Rcpp]; }; palmerpenguins = derive2 { name="palmerpenguins"; version="0.1.0"; sha256="0q1k3cdkliq7kwrg1n0vs9b6cjwyfarhlgdijhp9c6riy6y5ik7x"; depends=[]; }; palmtree = derive2 { name="palmtree"; version="0.9-1"; sha256="06438wla5zm2s8vgip15lfy5gmhwh3wkiak8hsylc8zzkvn698cn"; depends=[Formula partykit]; }; - palr = derive2 { name="palr"; version="0.2.0"; sha256="0c9fg3kbl2n6m01ck2pmavgxbk953vdxqsc3cw6phnnav93kr5cf"; depends=[]; }; + palr = derive2 { name="palr"; version="0.3.0"; sha256="0xb2k4vhlczg4ys1haybrlcpmwhpbfivqg8cfj6mbiir452mb507"; depends=[]; }; pals = derive2 { name="pals"; version="1.7"; sha256="18pbivmqs9yqsb6p8anv42alny0njaq3dajibhzysax0b7rsk2js"; depends=[colorspace dichromat mapproj maps]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; pamm = derive2 { name="pamm"; version="1.121"; sha256="191f0g90s1m3w68mszmdsdv5yw7xd1vsdbwsfvmyydgxn4261pwk"; depends=[lattice lme4 lmerTest mvtnorm]; }; - pammtools = derive2 { name="pammtools"; version="0.5.6"; sha256="1d54zyh3vnfwrliawz7pqbfd4bp8q5bzl5rl1jnmdl8b3li9yn1f"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv mvtnorm pec purrr rlang survival tibble tidyr vctrs]; }; + pammtools = derive2 { name="pammtools"; version="0.5.7"; sha256="09qz67f9qxvsb997vnd6znh9q5x23f33kiz6gyvix7flam317p9n"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv mvtnorm pec purrr rlang survival tibble tidyr vctrs]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.56.1"; sha256="0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.6"; sha256="1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"; depends=[]; }; - pander = derive2 { name="pander"; version="0.6.3"; sha256="1bd9sdghlsppmff18k5fg3i0visq9f4wc82rlhwq5m82bmgdgnyi"; depends=[digest Rcpp]; }; + pander = derive2 { name="pander"; version="0.6.4"; sha256="1knjcr50xxns3w3kh15myjpsizn4d7fdqx071a4yj90imif07qjh"; depends=[digest Rcpp]; }; pandocfilters = derive2 { name="pandocfilters"; version="0.1-4"; sha256="1nlnvnvq3zwzpf6hnf8akl0w25kr7hrbr98rw5vgncxw35314xdp"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; - panelView = derive2 { name="panelView"; version="1.1.2"; sha256="0kbh2g8yynv2mvvndy89lkm5yhy2hr04z52i2ccv9yfrkyignlfp"; depends=[ggplot2 gridExtra]; }; + panelView = derive2 { name="panelView"; version="1.1.5"; sha256="1pvi1b571sbqbhma7m277ppcv98c9yc720fr9pgqfdy8hswsd2rd"; depends=[ggplot2 gridExtra]; }; panelWranglR = derive2 { name="panelWranglR"; version="1.2.13"; sha256="0zj0m08518zi6xsa7qik61ys1qqa2lqiar4l7acclkw58w5zrmbc"; depends=[caret data_table Hmisc]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; panelr = derive2 { name="panelr"; version="0.7.5"; sha256="00k0ylryrzg0zkda192i2c04cj4rh12r9pa07hy202vv9clfqjsw"; depends=[crayon dplyr Formula ggplot2 jtools lme4 lmerTest magrittr purrr rlang stringr tibble]; }; panelvar = derive2 { name="panelvar"; version="0.5.3"; sha256="1ckllb14k2xrnbwi5z84f6003f61vdbw0wcsa4vsma0yp4iybh0q"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; - pangaear = derive2 { name="pangaear"; version="1.0.0"; sha256="0i7k1sdhslw33dzpnrmajynq52svg8ri4mxz6aww2cah9y8vxlzl"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; + pangaear = derive2 { name="pangaear"; version="1.1.0"; sha256="1x1dbf7jahzc5s4gs0hn6xpw35xxbgp61aym50k384pavsdm9xgw"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; + papci = derive2 { name="papci"; version="0.1.0"; sha256="0ma1pfwgmj6qcg23yzhbnqip4qnxhsmfnvrgrr3ln65q5plmvh58"; depends=[binom dplyr DT Hmisc PropCIs ratesci readxl shiny shinythemes tidyverse]; }; papeR = derive2 { name="papeR"; version="1.0-5"; sha256="095qfgv6h3sl5p69gm1v0qh9axap8gq2a9a3v95688fia2ppym4x"; depends=[car gmodels xtable]; }; paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; parSim = derive2 { name="parSim"; version="0.1.4"; sha256="0iswcw52skx1hxb9bv9ihhwwyybprsk2615pmijsxp0bkzgsjc88"; depends=[dplyr pbapply snow]; }; parade = derive2 { name="parade"; version="0.1"; sha256="07x02j9jlldz4p0cyhw292041l3pziv56bhbzp4f0qpxhcbn5zn4"; depends=[]; }; paradox = derive2 { name="paradox"; version="0.7.1"; sha256="1difp0bzsfxcmbm1snahh3i6417k1a2w4mnjx65p20n2yiclmrgs"; depends=[backports checkmate data_table mlr3misc R6]; }; parallelDist = derive2 { name="parallelDist"; version="0.2.4"; sha256="0gqf9vi9hlbflxj941jv7hli8jiy2sqg8b312h401f8rkfqa9ckv"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="2.0"; sha256="18xw0s9lga2w981cx4daywp6b6gxvgl9mh68r13c5mmhis3b8v14"; depends=[mvtnorm]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; - parallelMap = derive2 { name="parallelMap"; version="1.5.0"; sha256="0kjyskwvkqvsyjq55rhypif6z92r33llb7krrhc9f9w68xzp5yja"; depends=[BBmisc checkmate]; }; + parallelMap = derive2 { name="parallelMap"; version="1.5.1"; sha256="1qg7zpz5sd9jp8wzjqahkhipwj1jn192llwg06q4gv9mlcsac261"; depends=[BBmisc checkmate]; }; parallelPlot = derive2 { name="parallelPlot"; version="0.1.0"; sha256="1zppgd0dwxfryv6wfl6k7jrny1yqb5q4f8phnnmzz9ydlv7xyv32"; depends=[htmlwidgets]; }; - parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; - parallelly = derive2 { name="parallelly"; version="1.25.0"; sha256="0adcyd8da25q3z8b9wgia4kzjm7mxrjwjs68gxc5ljw1ib0prjwi"; depends=[]; }; - param6 = derive2 { name="param6"; version="0.1.0"; sha256="0194l3imnr6di219cyhyqkjywfnda2m29pspc29x9d8q5v7ycfzk"; depends=[checkmate data_table R6 set6]; }; + parallelly = derive2 { name="parallelly"; version="1.28.1"; sha256="0qy6gj1xybiziks5gvw5px81n3klgr16kvb1qn1xp6j030xqibpl"; depends=[]; }; + param6 = derive2 { name="param6"; version="0.2.2"; sha256="0vgp2shd9b4ijv1p9phwdfn6bpsx6kxym8y7i464gbhvwh320x77"; depends=[checkmate data_table dictionar6 R6 set6]; }; paramGUI = derive2 { name="paramGUI"; version="2.1.4"; sha256="0k2wkl99ji3w7xmd9k7zzvrr3dbf3237q7lxm527dnrq331pmxmi"; depends=[colorspace fields shiny shinydashboard TIMP]; }; - parameters = derive2 { name="parameters"; version="0.13.0"; sha256="17dlwx9hrl6z2il14nxji0snwsf4sfbp3mv33jbpcw13sani1q81"; depends=[bayestestR insight]; }; + parameters = derive2 { name="parameters"; version="0.14.0"; sha256="03x2h8izbpz9cq25i0a6dh99m26a9isgpv4kxsfkx97qzlh9cd67"; depends=[bayestestR insight]; }; paramhetero = derive2 { name="paramhetero"; version="0.2.0"; sha256="16gvs8328bnqvhx47f0xwnmbmlakxmp4ivnjxk2b13z6qjs70ij4"; depends=[ggplot2 ggpubr lme4 survey]; }; paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; paramlink2 = derive2 { name="paramlink2"; version="1.0.3"; sha256="0ypn0fdrphblw64sdnfmyf9q4zbakqvl4xzr451phvhx52n1gb73"; depends=[pedprobr pedtools]; }; @@ -12900,16 +13427,19 @@ in with self; { parma = derive2 { name="parma"; version="1.5-3"; sha256="0yjpmxz20v6k107qylw42yf1b231hzym9dizjcq1kalivvscczc5"; depends=[corpcor nloptr quadprog Rglpk slam truncnorm]; }; parmigene = derive2 { name="parmigene"; version="1.1.0"; sha256="067rqxqyzy1fsjj0s1g7af4527whwdhzjzc5b8a8n7683na59ns4"; depends=[]; }; parmsurvfit = derive2 { name="parmsurvfit"; version="0.1.0"; sha256="0d3614q76dw3f7y9p8378hdny7bz5fymma5l0zpygr1cfnacdhh6"; depends=[fitdistrplus flexsurv ggplot2]; }; - paropt = derive2 { name="paropt"; version="0.1"; sha256="0934apc1paxsdahf7zywj4aaii7zmgfff7crpjvlmjg4x0pq390v"; depends=[Rcpp RcppArmadillo]; }; - parseRPDR = derive2 { name="parseRPDR"; version="0.0.2"; sha256="14a8x0wb9lyzvzbjmsrixx4vc2cmq60qlz1y0647zac6f6s3a50g"; depends=[bigmemory data_table doParallel foreach stringr]; }; - parsec = derive2 { name="parsec"; version="1.2.3"; sha256="142zxj34qsf0s537bcabf04yi2qfmy65bgczpkvbyv5vkajxl10v"; depends=[igraph netrankr]; }; + paropt = derive2 { name="paropt"; version="0.2.1"; sha256="0a9xd340lqmj32vzwbnrxqa3cklprpikr8f8d8xfj8n1cyw39jwl"; depends=[Rcpp RcppArmadillo]; }; + parqr = derive2 { name="parqr"; version="0.1.0"; sha256="11956dvv46sgpmbv429c24wxdhfqvc07jxc1i4yymyz1l8wgr3yb"; depends=[arrow magrittr purrr]; }; + parseRPDR = derive2 { name="parseRPDR"; version="0.2.1"; sha256="1k4153bhf623xla6b174as4n8fh8ic0wnw8psxwa2vj3q3nifwbx"; depends=[bigmemory data_table doParallel foreach readr reticulate stringr]; }; + parsec = derive2 { name="parsec"; version="1.2.5"; sha256="1qd9gyb6zkahql74x9nds72fmx0i5cyg9kank929cz5iziqf85y5"; depends=[igraph netrankr]; }; parsedate = derive2 { name="parsedate"; version="1.2.1"; sha256="05l6f1n3dsm383w7jfg3j38klvmzzfvc7qi9zr5ij13rljj8s1vb"; depends=[rematch2]; }; - parsnip = derive2 { name="parsnip"; version="0.1.5"; sha256="0c12lyfxqsdprqlcmgy421py38z28h88d68pxb1c4fw14v1c2d06"; depends=[dplyr generics globals glue magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; + parsermd = derive2 { name="parsermd"; version="0.1.2"; sha256="15fy5vgzbrxq1yj4bgd0q1n5gjwvfh6s03ar5mj3hpp5mz6qmsdg"; depends=[BH checkmate cli dplyr lifecycle magrittr pillar purrr Rcpp readr rlang rmarkdown tibble tidyr tidyselect withr yaml]; }; + parsnip = derive2 { name="parsnip"; version="0.1.7"; sha256="12chngdzplwkk1c9k8y7cwaqlyy72yamlknp7ksg7g9p3b58f1fb"; depends=[dplyr generics globals glue hardhat lifecycle magrittr prettyunits purrr rlang tibble tidyr vctrs]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partR2 = derive2 { name="partR2"; version="0.9.1"; sha256="06ky0hhrq0mcsn9rwrzvwn0rrjj0l8rxs0hqp10668gdq5hjk8bn"; depends=[dplyr ggplot2 lme4 magrittr pbapply purrr rlang tibble tidyr]; }; partialAR = derive2 { name="partialAR"; version="1.0.12"; sha256="0fv1ffgqdbl04b4cmfmvzwah8ms9cxx3dsdralkk92bxxhybcjsl"; depends=[data_table ggplot2 KFAS MASS plot3D Rcpp tseries urca zoo]; }; partialCI = derive2 { name="partialCI"; version="1.2.0"; sha256="0hi936yg4g5bg61ix2i68f8q4c5nvvshl2728ynz1rl970qfcrp7"; depends=[data_table ggplot2 glmnet KFAS MASS partialAR Rcpp TTR zoo]; }; partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; }; + particle_swarm_optimisation = derive2 { name="particle.swarm.optimisation"; version="1.0"; sha256="0y3pq129irxifiph40mf027gbc02c4pwkchs305pcbj3vr9pwsyw"; depends=[R6 rgl]; }; particles = derive2 { name="particles"; version="0.2.2"; sha256="0pncfpk89hsfjch8h5b86rx7hsgdyg9bsxc54f5bf0y8gh9v98qj"; depends=[digest dplyr igraph magrittr mgcv Rcpp rlang tidygraph]; }; partition = derive2 { name="partition"; version="0.1.3"; sha256="1q6ghrvykh5zgk210qf0cavn5iygs51hzbgm2ny85nzyqvhcjkdf"; depends=[crayon dplyr forcats ggplot2 infotheo magrittr MASS pillar purrr Rcpp RcppArmadillo rlang stringr tibble tidyr]; }; partitionBEFsp = derive2 { name="partitionBEFsp"; version="1.0"; sha256="0rirqk9v5jbjs2jpjjkg7kvay9f093q2gwx5fx3bm9b0f5869w1b"; depends=[]; }; @@ -12919,10 +13449,11 @@ in with self; { partitions = derive2 { name="partitions"; version="1.10-2"; sha256="1bckdl6alqi6y7ri3qr2pz9zzqgs167c73bhnwbq4jk0mpxwbgg6"; depends=[gmp mathjaxr polynom sets]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-3"; sha256="17md3j41knscllckiqnvkqvf2v0fgsig101vgg6z5ic1yzvzfxgs"; depends=[]; }; - party = derive2 { name="party"; version="1.3-7"; sha256="1pwk7zsz05w4nk68b2gr0p4mgmk6nkkw82m9gdm8m1zbldj6277h"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; - partykit = derive2 { name="partykit"; version="1.2-13"; sha256="15bfhqvx2y4vclnc3sw4v7ggs70pk57b3qk9aqjfvdrx444d2gd4"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; + party = derive2 { name="party"; version="1.3-8"; sha256="0182g7sv0yr0rfa2y5mcydvs5vcrl0gbraxivvinr1k2zzl0zf5n"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + partykit = derive2 { name="partykit"; version="1.2-15"; sha256="1b73s5l19yicwginqsg5xr7fzb005x372n0wb34kk6jb5x5lbsdj"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; parzer = derive2 { name="parzer"; version="0.4.0"; sha256="1lm48yd6i7n9xfysv379c94274h7j93bms5myl9kj6zk7b0gssl3"; depends=[Rcpp withr]; }; + pasadr = derive2 { name="pasadr"; version="1.0"; sha256="0gc44jbqn96bn7f6xjmszz5lgsby24sxziixvhbkh5lgs4zap8i2"; depends=[pracma scales]; }; pass_lme = derive2 { name="pass.lme"; version="0.9.0"; sha256="1rxm509vnkdvdxii4jwniirdb2pv90rjkf6wjc9zrjh88jrl678k"; depends=[]; }; passport = derive2 { name="passport"; version="0.3.0"; sha256="176pkc7x76339bawdwywdcmiynzzlrwr91fgf5q0rq7asd9nc7d1"; depends=[]; }; passt = derive2 { name="passt"; version="0.1.3"; sha256="0yphnw38wwv303lkbfj2y3fwfjnd8l7gyi60c7xaj6qwy4y5ww8k"; depends=[dplyr magrittr rlang tidyr]; }; @@ -12933,43 +13464,50 @@ in with self; { patchDVI = derive2 { name="patchDVI"; version="1.10.1"; sha256="14zhl2skj20gc09ycrycdq2slqrpbh6nf0lcsxf55kvshnwnmknc"; depends=[]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; patchwork = derive2 { name="patchwork"; version="1.1.1"; sha256="10glgkf58lcykcwda1hj6xdps02m3i247qynk6s2jmwljagps3fg"; depends=[ggplot2 gtable]; }; - patentr = derive2 { name="patentr"; version="0.1.0"; sha256="1jxm45a97v160kqv39041jwy9083iya41g8kvp7k4a8g3b7ga87w"; depends=[data_table dplyr lubridate magrittr Rcpp rlang]; }; - patentsview = derive2 { name="patentsview"; version="0.2.2"; sha256="003pcddz6adsh893xvlb9d72r316z14nlp3fwm1vbc50hpa24w6z"; depends=[httr jsonlite]; }; + patentr = derive2 { name="patentr"; version="0.1.4"; sha256="14jxqaq306mpppzz14f0qw1d0brrrkcs121h5fdiskvly3vjvs1j"; depends=[dplyr lubridate magrittr progress Rcpp rlang xml2]; }; + patentsview = derive2 { name="patentsview"; version="0.3.0"; sha256="1ysqarmqqbw7zy1c3nfa08i6byima31pmcvv60qz9qjpyd2np0fn"; depends=[httr jsonlite]; }; path_chain = derive2 { name="path.chain"; version="0.2.0"; sha256="1p28mcar4krgvkgn02xrlwcpzchnppn2l2k2iwh511c3qrfpy653"; depends=[logger rlang stringi]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9.1"; sha256="018frv1n3x0bf1682jibnm5k2dlkg85xa9mps28l22a0z8bplbv5"; depends=[shape]; }; - pathfindR = derive2 { name="pathfindR"; version="1.6.1"; sha256="1hc0vrj0bszgpxgjvn0rspa4xb6023lzwvzlh0vm3jswh56vq6j1"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 ggraph ggupset igraph KEGGgraph KEGGREST knitr magick msigdbr org_Hs_eg_db pathfindR_data R_utils rmarkdown]; }; - pathfindR_data = derive2 { name="pathfindR.data"; version="1.1.1"; sha256="1f4lp3m4c92dks14nxj5h8z609jgx5fhnyy1ng9n842rxry4s9ks"; depends=[]; }; + pathfindR = derive2 { name="pathfindR"; version="1.6.2"; sha256="10fvcpikp8drmj877jn5c4216fmkr6w1xzqs5rk4qaq4w68j469h"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 ggraph ggupset igraph KEGGgraph KEGGREST knitr magick msigdbr org_Hs_eg_db pathfindR_data R_utils rmarkdown]; }; + pathfindR_data = derive2 { name="pathfindR.data"; version="1.1.2"; sha256="0p0infg5hxw40bacgni5w1a8xb29wc0xrd8mjsnlfarr8wygd9fl"; depends=[]; }; pathlibr = derive2 { name="pathlibr"; version="0.1.0"; sha256="0z8iz765fi1s2770p7dwwv2anihfw86kb5dwg081wb6474wiq6v8"; depends=[glue logging magrittr purrr R6 rlang]; }; + pathlit = derive2 { name="pathlit"; version="0.1.0"; sha256="0harvldkhq2c1wb9i4n72w1s3frhjzyn4cjpwk1n350zg12kh9gz"; depends=[httr jsonlite testthat timeSeries usethis]; }; pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; }; pathmodelfit = derive2 { name="pathmodelfit"; version="1.0.5"; sha256="1nxcnmz9r99znqmwibvvix7h3acp22cs6wp1jmp21p862ncabll8"; depends=[lavaan]; }; - paths = derive2 { name="paths"; version="0.1.0"; sha256="0yyllrcq7p22xj9b60l7pgjsvwqqz9k5mfsa1nmm745sqh3fbahr"; depends=[BART boot gbm ggplot2 metR pryr tidyr twang]; }; - patrick = derive2 { name="patrick"; version="0.0.3"; sha256="10mmjzn1vi23lcdz3ss0m5yhgln58gbzvq9jzs6lqn9dwy9m3gi0"; depends=[dplyr purrr rlang testthat tibble]; }; + paths = derive2 { name="paths"; version="0.1.1"; sha256="19fl54r2myb9ky8ffnx71xw23a8dlg15sj9v36xcpv79z61ryws9"; depends=[BART boot gbm ggplot2 metR pryr tidyr twang]; }; + pathviewr = derive2 { name="pathviewr"; version="1.0.1"; sha256="0xg7ysdfkvsyc8rglw876bb1xlxi30hq1agnmxgg7xw61jsd3x0l"; depends=[cowplot data_table dplyr fANCOVA ggplot2 magrittr purrr R_matlab stringr tibble tidyr tidyselect]; }; + pathwayTMB = derive2 { name="pathwayTMB"; version="0.1.0"; sha256="1r4mrnd4iz0klsq11hq3jjxncfh115ax2zh8fs42sz33nqv3v58m"; depends=[BiocGenerics caret clusterProfiler data_table GenomicFeatures glmnet maftools pROC purrr randomForest RColorBrewer survival survminer]; }; + patientProfilesVis = derive2 { name="patientProfilesVis"; version="2.0.1"; sha256="093c5fnjxqlnfxgm0z3g2wgwbxpsqg5k9hb5mr8zi462jzn7yiqw"; depends=[clinUtils cowplot dplyr ggplot2 gridExtra knitr plyr reshape2 scales stringr]; }; + patrick = derive2 { name="patrick"; version="0.0.4"; sha256="1v282qd8pg0xkgmfn6nz7rj3mv47836k8gw8l54q8xnxz6dbz48i"; depends=[dplyr purrr rlang testthat tibble]; }; patternator = derive2 { name="patternator"; version="0.1.0"; sha256="0s4vrhdfblllnhpz2awhhrkwm8d4170xg7fpsp7kvvqy8z8biwvi"; depends=[data_table]; }; patternize = derive2 { name="patternize"; version="0.0.2"; sha256="0hd6l66ybrjjndad5m2li9qqsjd0k2blhvjm469j6ab95073zq9f"; depends=[abind dplyr imager magrittr Morpho purrr raster rgdal RNiftyReg sp vegan]; }; patternplot = derive2 { name="patternplot"; version="1.0.0"; sha256="0n4y23g894amwi62lx10k15i28rsmiaw52bds8dzmvkykkp9mm8q"; depends=[dplyr ggplot2 gridExtra gtable jpeg png R6 Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; - pavo = derive2 { name="pavo"; version="2.7.0"; sha256="1l0ak184gb7vpf7zxn8wja1y6mmdnmsp26r7jsga51i818hl25dp"; depends=[cluster farver future_apply geometry lightr magick plot3D progressr sp viridisLite]; }; + pavo = derive2 { name="pavo"; version="2.7.1"; sha256="1nv67p0y9kjrhnhp5yqnh6y485aydwdlsvdfkdbkgqz00jhnsmcx"; depends=[cluster farver future_apply geometry lightr magick plot3D progressr sp viridisLite]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; - paws = derive2 { name="paws"; version="0.1.11"; sha256="1pkwjdrziyh6bhpilx29zsv2nmv60z6fqxgx2kvjqvl8z36yqfhw"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; - paws_analytics = derive2 { name="paws.analytics"; version="0.1.11"; sha256="024ffpzn77kr45xk2mj6slhjlpm6d7sg4j7aivph3a36qjfw3ac4"; depends=[paws_common]; }; - paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.11"; sha256="1vywqgn1x3dmgx8xaaigg58f8r0rk2h1rhlaxr5nh57mapgwdpa7"; depends=[paws_common]; }; - paws_common = derive2 { name="paws.common"; version="0.3.9"; sha256="06mky5kmjqq3ra9ra42xc23ik0ihc08is5qik4rgb614yx64rn4q"; depends=[base64enc digest httr ini jsonlite xml2]; }; - paws_compute = derive2 { name="paws.compute"; version="0.1.11"; sha256="0jfw6mhk040kxnvnw79y7s6b3npxchdxnzkd6h6abxy265d59my2"; depends=[paws_common]; }; - paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.11"; sha256="0hbs1zp98mimwshab4vip4nayb7fga8r06mcmk93jnbq9a4gblxa"; depends=[paws_common]; }; - paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.11"; sha256="0pzbkgrpqsljvsmhyz78rzhih4dii04isn7i4ldch4hbn6syab4v"; depends=[paws_common]; }; - paws_database = derive2 { name="paws.database"; version="0.1.11"; sha256="0dglgags3bsjhlr18idszfa3421bd7z5pjb3ajca0m3qbks13sxk"; depends=[paws_common]; }; - paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.11"; sha256="1s0gkcm95gngyn2g9jrplzyxnb1ib0z6cp95y25hr3yvim9yx2ci"; depends=[paws_common]; }; - paws_management = derive2 { name="paws.management"; version="0.1.11"; sha256="0n62bbminvcrcvll3wsqnqg41qk0alglh6ncg5jwb357qk6r59jg"; depends=[paws_common]; }; - paws_networking = derive2 { name="paws.networking"; version="0.1.11"; sha256="1kw28pcdxjjgrcliqj854a4cx3jvrvf0mlz5xdcdfdas25hjvqng"; depends=[paws_common]; }; - paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.11"; sha256="1pc416pnvrljbzi61wry7s3ampsbd8g9xqf3h28ws3903qmi1cv1"; depends=[paws_common]; }; - paws_storage = derive2 { name="paws.storage"; version="0.1.11"; sha256="0zpnb0cjw1lvwq4wax9471lyh68q9zja3k15rnxdm5qad7a3915x"; depends=[paws_common]; }; - pbapply = derive2 { name="pbapply"; version="1.4-3"; sha256="08gb6c8p1r9z8wrfidj2dfn6irm43k6f4448d1d6nxmy6msjirlg"; depends=[]; }; + paws = derive2 { name="paws"; version="0.1.12"; sha256="0kn1z045r106fwqcaz52hb02bhrcblh479cajfjiq480s1iljcw6"; depends=[paws_analytics paws_application_integration paws_compute paws_cost_management paws_customer_engagement paws_database paws_developer_tools paws_end_user_computing paws_machine_learning paws_management paws_networking paws_security_identity paws_storage]; }; + paws_analytics = derive2 { name="paws.analytics"; version="0.1.12"; sha256="04gnaxmj21l312xkrsd9bisi0bz9h6h5fyhwlqylcxi077z1yb2g"; depends=[paws_common]; }; + paws_application_integration = derive2 { name="paws.application.integration"; version="0.1.12"; sha256="0llyd9hc679pad1ih0rcc38q5xxpzinhwrl8cvrkgsjgbc3agq42"; depends=[paws_common]; }; + paws_common = derive2 { name="paws.common"; version="0.3.12"; sha256="1khq1rv0yij4l0vi2x6hslnzpsd6m5n6nipfac7g3na9ah93h8i9"; depends=[base64enc digest httr jsonlite xml2]; }; + paws_compute = derive2 { name="paws.compute"; version="0.1.12"; sha256="1km6fng6il5fcjlrbbndahsw2dr2ql83hwac9wlpd67zm3wy9lky"; depends=[paws_common]; }; + paws_cost_management = derive2 { name="paws.cost.management"; version="0.1.12"; sha256="0in4f8ygw5g2v6vl3lz2y0v51llglh8b1ymbd04d54xxlgn83knh"; depends=[paws_common]; }; + paws_customer_engagement = derive2 { name="paws.customer.engagement"; version="0.1.12"; sha256="0ac6hzn4ilfjhzdmc9x80999fl18cz16mky31qd3y09m93w2xkdj"; depends=[paws_common]; }; + paws_database = derive2 { name="paws.database"; version="0.1.12"; sha256="08jpwz95fw3f68j0wxh2lg57nn60khflldab0ryhkkbcw1iy0qyz"; depends=[paws_common]; }; + paws_developer_tools = derive2 { name="paws.developer.tools"; version="0.1.12"; sha256="16gb8g8s67al7qdd95fbigxqkih9a9p7slkyf3cga42wb6miiby2"; depends=[paws_common]; }; + paws_end_user_computing = derive2 { name="paws.end.user.computing"; version="0.1.12"; sha256="1xxsz86nx128sizym9np8vldzkbym0p3i6vcy94kq1y0cylaicv3"; depends=[paws_common]; }; + paws_machine_learning = derive2 { name="paws.machine.learning"; version="0.1.12"; sha256="01w2y5952pk50xjbzby2pc51xrkrzjpfxbmii1b10cl2xgzfkxsa"; depends=[paws_common]; }; + paws_management = derive2 { name="paws.management"; version="0.1.12"; sha256="09k7wg0jlj40zs2yb3vldffpkdcjg7ap98n7c5lxr5plpca08swg"; depends=[paws_common]; }; + paws_networking = derive2 { name="paws.networking"; version="0.1.12"; sha256="02hxaa5nlj70mdggh379ij3fn09xm8h5ldzsyf45c342prpl6zwj"; depends=[paws_common]; }; + paws_security_identity = derive2 { name="paws.security.identity"; version="0.1.12"; sha256="092lz2ipn5iqr593x7ra8c0bj64yf6315mdc3llgwrjyb4vfxif9"; depends=[paws_common]; }; + paws_storage = derive2 { name="paws.storage"; version="0.1.12"; sha256="06m887vpqp5d6k3zxdlga599dsv8v3rladk7xqaxqnld1f17am04"; depends=[paws_common]; }; + pbapply = derive2 { name="pbapply"; version="1.5-0"; sha256="0m8a0ygwl98cs0vcha5gs9f7z8whcplwxhravhs9bfp5hvigxzgg"; depends=[]; }; pbatR = derive2 { name="pbatR"; version="2.2-13"; sha256="01ra1ggdpxdl1xqjdh86qynr5gkgzw01ww6j9bwgx4mj20i6j1ha"; depends=[rootSolve survival]; }; + pbbd = derive2 { name="pbbd"; version="1.0.0"; sha256="07g029qw5949500c879iv86zwg2fldqrz8wzfz335jmcinqimgj6"; depends=[ibd]; }; pbdBASE = derive2 { name="pbdBASE"; version="0.5-3"; sha256="1f90bk1mp1s03177b9g5w5ni77jzrzc1pl3bjx0w0fjbjs1myn79"; depends=[pbdMPI pbdSLAP]; }; pbdMPI = derive2 { name="pbdMPI"; version="0.4-3"; sha256="1mxikhr0qfqksr62v5dxvzgqx07391p7ikjk9g2w4xzrzmxs8fc3"; depends=[float rlecuyer]; }; pbdPROF = derive2 { name="pbdPROF"; version="0.4-0"; sha256="174jwrkvw5qz1430y6id01w1czlw45j1yw8a8dyw36knrmvmdz10"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-1"; sha256="1pz71zfs9qw96dj3h5mrm734vbbi4drlv9hrw91dbzm3a7jsxg4q"; depends=[]; }; - pbdSLAP = derive2 { name="pbdSLAP"; version="0.3-0"; sha256="1jxpgsxkzi3s1qf3g01xma9mqwgi1b22x5lh5xnr78wa0764dyd3"; depends=[pbdMPI rlecuyer]; }; + pbdSLAP = derive2 { name="pbdSLAP"; version="0.3-1"; sha256="1iwc5iw6q7r6p08yngczqlbqk779nsx2rmxc3fajzl6d73rprshl"; depends=[pbdMPI rlecuyer]; }; pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-5"; sha256="1v8iv1pzs4j3ics9k9h4xjkv6z1ma2xbqy003xk2lqax6srqi02d"; depends=[]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; pbixr = derive2 { name="pbixr"; version="0.1.4"; sha256="098fwmar56l8w5r58grirqypdmc2c4hil7bi11z18llja62fncnw"; depends=[dplyr formatR jsonlite stringr textclean xml2 zip]; }; @@ -12979,7 +13517,7 @@ in with self; { pbo = derive2 { name="pbo"; version="1.3.4"; sha256="0v522z36q48k4mx5gym564kgvhmf08fsadp8qs6amzbgkdx40yc4"; depends=[lattice]; }; pbs = derive2 { name="pbs"; version="1.1"; sha256="0cpgs6k5h8y2cia01zs1p4ri8r7ljg2z4x8xcbx73s680dvnxa2w"; depends=[]; }; pbv = derive2 { name="pbv"; version="0.4-22"; sha256="0658k8ql78y756l15wx0i6gpicgkbczwc6g7dg15i81xy1hg49qb"; depends=[Rcpp RcppArmadillo]; }; - pcFactorStan = derive2 { name="pcFactorStan"; version="1.5.2"; sha256="0hd042bli63mvgxalagxzhxh5z1gd9vblvih4zx9jcc7jk00g6y9"; depends=[BH igraph lifecycle loo mvtnorm Rcpp RcppEigen reshape2 rstan StanHeaders]; }; + pcFactorStan = derive2 { name="pcFactorStan"; version="1.5.3"; sha256="0xyz0nmgyc1i46b37qs1ip25pv4932qn5fdisbdxmwig2sxvacd9"; depends=[BH igraph lifecycle loo mvtnorm Rcpp RcppEigen RcppParallel reshape2 rstan rstantools StanHeaders]; }; pcIRT = derive2 { name="pcIRT"; version="0.2.4"; sha256="0crll51s14nisnaxjln7bc3b1a181v358nfkh1p5iiyn98clacl6"; depends=[combinat Rcpp]; }; pcLasso = derive2 { name="pcLasso"; version="1.2"; sha256="1gkr1kvm4lrd63jcarv9b7gjjcyyny6z49gvy2rcqg17zfqdxysv"; depends=[svd]; }; pcSteiner = derive2 { name="pcSteiner"; version="1.0.0"; sha256="14rw7xb6n46ddiyara4i0296p4c16bljrj0j7g3rlnspb95vzvwr"; depends=[igraph]; }; @@ -12989,7 +13527,7 @@ in with self; { pcaPP = derive2 { name="pcaPP"; version="1.9-74"; sha256="1dlrz5plb8b89vr3j6sn9jwryyhcwflqkiilxkybbr379m1pp0sh"; depends=[mvtnorm]; }; pcadapt = derive2 { name="pcadapt"; version="4.3.3"; sha256="01wvcflfsnlsq23vq03n870fxsab3ab29k26nqlqxw82lbvx99s3"; depends=[bigutilsr data_table ggplot2 magrittr mmapcharr Rcpp rmio RSpectra]; }; pcal = derive2 { name="pcal"; version="1.0.0"; sha256="07119k5f4h9jc48bicl4q5i7bdrkha3rz22r6g44c8ilnkvjhw6j"; depends=[Rdpack]; }; - pcalg = derive2 { name="pcalg"; version="2.7-2"; sha256="0zry3a37zh1lyh4xdj85hcrf1v7gwlnmaji3v111b2qp4mzyd690"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; + pcalg = derive2 { name="pcalg"; version="2.7-3"; sha256="0va8cx2g8dhf65sz1gzasvnnbzjrnccb5bhixj448bcnxq3mw8ql"; depends=[abind bdsmatrix BH clue corpcor fastICA ggm graph igraph RBGL Rcpp RcppArmadillo robustbase sfsmisc vcd]; }; pcalls = derive2 { name="pcalls"; version="1.0"; sha256="1vdgvrzfv69p3p5zc9i6gxq53f36s0mia4idzrbsda661f1bhmxk"; depends=[]; }; pccc = derive2 { name="pccc"; version="1.0.5"; sha256="0jh8yadks76ip9jmgvld9nycdm74f5gllkyhfmnrir8vi6xwvbad"; depends=[dplyr Rcpp]; }; pcdpca = derive2 { name="pcdpca"; version="0.4"; sha256="0ys4hrin0w3f87d1d986wvrfkfwapzj9hz7d7v92r60ns74g7r5m"; depends=[fda freqdom]; }; @@ -13003,11 +13541,11 @@ in with self; { pcmabc = derive2 { name="pcmabc"; version="1.1.1"; sha256="1bacxxgcrgsa7h1baybwwinw3n95cx5wkkfm5cb4iscgk910mfmb"; depends=[ape distory geiger mvSLOUCH phangorn TreeSim yuima]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.7"; sha256="0jibi4wylxkisgj740xbibjqs60d5xg9my4sx7vshgfl941y9wcv"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; - pcoxtime = derive2 { name="pcoxtime"; version="1.0.1"; sha256="0c71k5vcz0fryd4cz5kg7m2sbz2rllajxmzdzahcjfrlm82nirxr"; depends=[doParallel foreach ggplot2 pec PermAlgo prodlim Rcpp RcppArmadillo riskRegression survival]; }; + pcoxtime = derive2 { name="pcoxtime"; version="1.0.2"; sha256="0fyzmah3b1gfcwlspf2gr7iwdrgk1q688z3b545zlmah3d8hy929"; depends=[doParallel foreach ggplot2 pec PermAlgo prodlim Rcpp RcppArmadillo riskRegression survival]; }; pcr = derive2 { name="pcr"; version="1.2.2"; sha256="1lmgm8k3s7780ivrdj0zk1ninx7b5jffir6q5p2p47h62qqjmp5d"; depends=[ggplot2]; }; pcse = derive2 { name="pcse"; version="1.9.1.1"; sha256="1rb9146vjkf36vc5v3frykmsff7kp6qp1hhmj8pak583in4rz8f8"; depends=[]; }; pcsstools = derive2 { name="pcsstools"; version="0.1.1"; sha256="1vp4lflxzzgjfh1nkkfvnb74pjmbcdgrc1hlakjd8i5rw7swvr20"; depends=[gtools Rdpack]; }; - pct = derive2 { name="pct"; version="0.8.0"; sha256="1y4xjhm6bnmqzwm73xz1nilpb31s26hlkdyn123ig80lpd1inlgy"; depends=[boot readr sf stplanr]; }; + pct = derive2 { name="pct"; version="0.9.1"; sha256="0chqvaa8cfv3s3zf940hzca90967raakxndyxcg08acysvfq6fir"; depends=[boot readr sf stplanr]; }; pcts = derive2 { name="pcts"; version="0.15"; sha256="1wl3hgj0sn9128vwcqin37jn5ww3na4g7r1isj39j6m2v76s3ndk"; depends=[BB gbutils lagged lubridate Matrix mcompanion PolynomF Rdpack sarima xts zoo]; }; pdR = derive2 { name="pdR"; version="1.7"; sha256="05rnyb9znb71ilr9kf62x30knby1rm0p4ain220wvb62vkz054d7"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.4"; sha256="1sf2d7vh7a1qc0cq230an8pzg9qi9g640z0ql8x2pp9wfawfzn1f"; depends=[ddalpha multitaper Rcpp RcppArmadillo Rdpack]; }; @@ -13019,7 +13557,7 @@ in with self; { pdfminer = derive2 { name="pdfminer"; version="1.0"; sha256="0hm9nalazqcg4n1sqcjan8wm1rvv4lnflmlkrqkj5yhhmza7xkfh"; depends=[checkmate jsonlite]; }; pdfsearch = derive2 { name="pdfsearch"; version="0.3.0"; sha256="0mk1s8b7cdz025xn9kg5xnw388sndhjm80ckf71daxviknrzcscf"; depends=[pdftools stringi tibble tokenizers]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; - pdftools = derive2 { name="pdftools"; version="2.3.1"; sha256="01i5g2mjkshis0zlm7lrvi7kkzl4dn3if1hzwkgzf9n2mi33ndsx"; depends=[qpdf Rcpp]; }; + pdftools = derive2 { name="pdftools"; version="3.0.1"; sha256="1dcbs5n5y8zi7bbyx491m9ik8kkmjr301x8ms85fmwdfb5a97m8k"; depends=[qpdf Rcpp]; }; pdi = derive2 { name="pdi"; version="0.4.2"; sha256="04lz16al9c3ycdswfpf1fanghglpzbl8pfggr9bjmcn7k2v91ysv"; depends=[dplyr magrittr purrr randomForest readxl stringr tibble tidyr tidyselect]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; @@ -13027,16 +13565,16 @@ in with self; { pdqr = derive2 { name="pdqr"; version="0.3.0"; sha256="0agkxl23h57smq292l5b0wdi2ixxg6l0fi74sans5hljmyg2zqns"; depends=[]; }; pds3 = derive2 { name="pds3"; version="0.5.0"; sha256="1hipi4ygk30khrrslxq3m9qdichazhrl34k444shs7gi6wjx9ilr"; depends=[rly]; }; pdxTrees = derive2 { name="pdxTrees"; version="0.4.0"; sha256="0cw1zrkawc2wnbd2pif8732kl92qvklxvx6hnikx3siz22psvbl8"; depends=[dplyr magrittr rlang]; }; - pdynmc = derive2 { name="pdynmc"; version="0.9.3"; sha256="07376gf5i98sf4k8dmd1yrw0h7nhdd39qdjbrz1916dwm45psmga"; depends=[data_table MASS Matrix optimx qlcMatrix Rdpack]; }; + pdynmc = derive2 { name="pdynmc"; version="0.9.5"; sha256="0nwc8zgzx333ladgd9b6r147g4l0sv94fs2wdm4hvpd8kx1z2vgd"; depends=[data_table MASS Matrix optimx qlcMatrix Rdpack]; }; peRiodiCS = derive2 { name="peRiodiCS"; version="0.5.0"; sha256="1366gmn6qfciwcjsfnbl3hfa16ffn11g00fm0kv74ilvm3nnawk3"; depends=[Hmisc rms]; }; - peRspective = derive2 { name="peRspective"; version="0.1.0"; sha256="1zz3znzaa80k60jddys5fhxwx4c8lyqymx5fw2zvj654rnk0mmzc"; depends=[crayon dplyr glue httr jsonlite magrittr purrr rlang rlist stringr tibble]; }; - peacesciencer = derive2 { name="peacesciencer"; version="0.3.0"; sha256="1x4lgbrh8n3wqn5yv2d8ya7c934fqv8xyv8bk6rqh8bx5rnx6i5k"; depends=[dplyr geosphere lubridate magrittr rlang stringr tidyr]; }; + peRspective = derive2 { name="peRspective"; version="0.1.1"; sha256="1dca7592h9yp8lfj866hjzg0d48c84v2kd9l5bsvkw935wwxwg2w"; depends=[crayon dplyr glue httr jsonlite magrittr purrr rlang rlist stringr tibble]; }; + peacesciencer = derive2 { name="peacesciencer"; version="0.5.0"; sha256="16jqbyknx0hj2xxpfy76017p4crs219hrpnqzjgb9bym9ax4qiad"; depends=[bib2df dplyr geosphere lubridate magrittr rlang stevemisc stringr tidyr]; }; peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; peakPick = derive2 { name="peakPick"; version="0.11"; sha256="1zf7ff9arm4hkdxrfhb0p8p7npd51icy773g2raaqsfys825xwhm"; depends=[matrixStats]; }; peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-3"; sha256="0vdhhds1lngaff7dkx4b1az3syqw8b22w2jskcrw0m49wp1dbbha"; depends=[]; }; pec = derive2 { name="pec"; version="2020.11.17"; sha256="1g2mmnw4i5bm4r1krn7fmjbijx8fawmxmzcjh1l8qd8f79bxzh42"; depends=[foreach lava prodlim riskRegression rms survival timereg]; }; - pedSimulate = derive2 { name="pedSimulate"; version="0.1.2"; sha256="0awbfcbylx7gz4nf58vhidfh299z35m1xnwpl8mqkqmm4i6h1azg"; depends=[]; }; + pedSimulate = derive2 { name="pedSimulate"; version="1.2.0"; sha256="1rlqj5q7sq3bid7ffjgyanvrg0wj2vly6b7zp4z307nqhiwqlapi"; depends=[]; }; pedbuildr = derive2 { name="pedbuildr"; version="0.2.1"; sha256="19yzfg5jms2qnww4p8npmk9815hrgqsbd49h8pi62yy9kjqnccai"; depends=[forrel glue pedprobr pedtools]; }; pedgene = derive2 { name="pedgene"; version="3.3"; sha256="0y6kr5ad4fmxljsj0czs9h1dkz63wvqiira9ibgsf0707xb0vh7f"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; @@ -13045,9 +13583,11 @@ in with self; { pedmut = derive2 { name="pedmut"; version="0.2.0"; sha256="0851r4yl5n1mf8pk3nik5kcnv12ffxc1hl1wxp6b81qz5lbfwxaf"; depends=[]; }; pedometrics = derive2 { name="pedometrics"; version="0.7.0"; sha256="0rqldc67yrcg16i5q9wrmfmh3lw3qrfdxwdb4mxkjxx18v4fv737"; depends=[lattice latticeExtra Rcpp]; }; pedprobr = derive2 { name="pedprobr"; version="0.5.0"; sha256="1hl2v98rfj71ggz75p8yfjhds12g88mgp9hzckk16ykdyggrrc7v"; depends=[pedmut pedtools]; }; - pedquant = derive2 { name="pedquant"; version="0.1.6"; sha256="1hjiqsbdcca4pk36rapndpa3awcv2jlql0g1qk66vplnlg5d6zwl"; depends=[curl data_table ggplot2 gridExtra httr jsonlite plotly readr readxl rvest scales stringi TTR xml2 zoo]; }; - pedtools = derive2 { name="pedtools"; version="0.9.7"; sha256="10qj2n3f39sv0pr20k198fg48s5l76rv9pwd5ciravj94vrfak20"; depends=[kinship2]; }; - pegas = derive2 { name="pegas"; version="1.0"; sha256="0nbdcrpha2r50gp0nymr4lqmqhd4237rzz6ank8cqdhl7lcsz69v"; depends=[adegenet ape]; }; + pedquant = derive2 { name="pedquant"; version="0.1.7"; sha256="0hy6dz00bgfncndkqhz2ikrmcn08s86cqcyjaj7cnpivlpwvph4i"; depends=[curl data_table ggplot2 gridExtra httr jsonlite plotly readr readxl rvest scales stringi TTR xml2 zoo]; }; + pedsuite = derive2 { name="pedsuite"; version="1.0.4"; sha256="0cg19aln0j9grjh53yckyvzspsclqcrzm0ch2b0854bjbnrzmxz1"; depends=[dvir forrel ibdsim2 paramlink2 pedbuildr pedmut pedprobr pedtools ribd segregatr]; }; + pedtools = derive2 { name="pedtools"; version="1.0.1"; sha256="1ar5g941yfibyhbg2zdgsdl47mfc1yhm5b7fmaqnh7m131cqlzll"; depends=[kinship2]; }; + peermodels = derive2 { name="peermodels"; version="0.10.2"; sha256="0zmkpfgji375155h8sgz2n1vw2ir9z0n6hd6ha3as3af797bx7f4"; depends=[httr jsonlite stringr]; }; + pegas = derive2 { name="pegas"; version="1.0-1"; sha256="0ykx84p7c8cad5d1mj8cm1d5cz2paacdjx4ll4qzmq827lcyycz1"; depends=[adegenet ape]; }; pems_utils = derive2 { name="pems.utils"; version="0.2.29.1"; sha256="0nmawl1l2wf77r02qpazqwm5708fk98k7l07wyybviwb1j3x1pqj"; depends=[baseline dplyr ggplot2 lattice latticeExtra loa RColorBrewer Rcpp rlang]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; @@ -13057,11 +13597,13 @@ in with self; { penalizedSVM = derive2 { name="penalizedSVM"; version="1.1.2"; sha256="03zw95bc6svbnzak9x72s3b8l9gh581mxn2di1fl89gxlh864amd"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; penalizedclr = derive2 { name="penalizedclr"; version="0.1.0"; sha256="0ka27azfdj4wa1p628b99pkrfjy1x8yjyd3d5g2v8mbsfg3j3bwg"; depends=[clogitL1 penalized survival tidyverse]; }; penaltyLearning = derive2 { name="penaltyLearning"; version="2020.5.13"; sha256="0297rp5zn6d0axl44i3baq2vqvhrx6s8irrysvqdcx1rkishf4j0"; depends=[data_table ggplot2]; }; - pencal = derive2 { name="pencal"; version="0.4.1"; sha256="0bf4inz5hwad6g73ipm0vw3bnnapg2brx3x86m1nf8m5816r8rja"; depends=[doParallel dplyr foreach glmnet lcmm magic MASS Matrix nlme survcomp survival survivalROC]; }; + pencal = derive2 { name="pencal"; version="1.0.0"; sha256="1a5j4zgvc1gjiq7qfcxabqak699dyb4glk37yr8cg78m0jw81rzy"; depends=[doParallel dplyr foreach glmnet lcmm magic MASS Matrix nlme survcomp survival survivalROC]; }; pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; }; pendensity = derive2 { name="pendensity"; version="0.2.13"; sha256="1wcsib7m2161nqqrmgdvrj7lr8zq6njc9xr935hwfh3qbbgkmfjb"; depends=[fda lattice]; }; - pense = derive2 { name="pense"; version="2.0.3"; sha256="02c9xdadcrph8g69vjq1z1xp4nhvm89zc79xq732fbgfgn8bzdqm"; depends=[lifecycle Matrix Rcpp RcppArmadillo rlang]; }; - pensim = derive2 { name="pensim"; version="1.3.2"; sha256="12rh9n6jjnlzjsdjjw60ams7l0n05skwkbql5d0jqrmpbxrca6rp"; depends=[MASS penalized]; }; + penfa = derive2 { name="penfa"; version="0.1.1"; sha256="1r8lq4kvlwlk7q0mdzkrdm9sx7lqq4l27jfxa1zcfh50sk1qlam2"; depends=[GJRM MASS mgcv trust]; }; + penppml = derive2 { name="penppml"; version="0.1.0"; sha256="0qknn4v3j4sd9y0alrfh03pjb7gksbfrkbjw33q66y12lb6sg040"; depends=[glmnet lfe magrittr ncvreg Rcpp RcppEigen rlang tidyr]; }; + pense = derive2 { name="pense"; version="2.1.0"; sha256="1gz9p3khmv6v4m9aw314zdxdr33qmddb4s2pads0lm5iylngjd4j"; depends=[lifecycle Matrix Rcpp RcppArmadillo rlang]; }; + pensim = derive2 { name="pensim"; version="1.3.3"; sha256="1raap4zlqgcqh8x83kp1ss5qcn0p7bwribp4dhfhrh9rl92hh92a"; depends=[MASS penalized]; }; peopleanalyticsdata = derive2 { name="peopleanalyticsdata"; version="0.2.1"; sha256="0ig65y4sl6wagzcvj8wwjw2dblb61hgbsqvp76wvxbhga1q0wnpf"; depends=[]; }; peperr = derive2 { name="peperr"; version="1.3"; sha256="0pcz7vjl4hgp25a8zv2zcsz3s3ly1zfngkpdnvvviycvq070plv4"; depends=[snowfall survival]; }; peppm = derive2 { name="peppm"; version="0.0.1"; sha256="1lvk1rjsx39mb93s9pclriw4fmf1sx05s59qqx5m3aqb4q8ffxkg"; depends=[Rcpp]; }; @@ -13073,7 +13615,7 @@ in with self; { perccalc = derive2 { name="perccalc"; version="1.0.5"; sha256="14557k7khc3l5m0vlam0fvbsb6p78v9gfcnx5ksxcvrab28xj7p3"; depends=[multcomp tibble]; }; percentiles = derive2 { name="percentiles"; version="0.2.2"; sha256="08gzl2qq0856nj20bdxl3r0a7p5f4cjmvxkaqkjvq4n275ghvskq"; depends=[assertive_types assertthat dplyr R6]; }; perfectphyloR = derive2 { name="perfectphyloR"; version="0.2.1"; sha256="1i1h5k2aqaqygd8gzq2bmz266mjzdi2mfikkz6hzmhi2il8708w9"; depends=[ape phytools Rcpp RcppArmadillo]; }; - performance = derive2 { name="performance"; version="0.7.1"; sha256="1kf8z7lrjv1bg8mqb7sq4651k2xg3d02azq7gr0jc4c52cr2yaqm"; depends=[bayestestR insight]; }; + performance = derive2 { name="performance"; version="0.7.3"; sha256="03qdsdl4x3hwqlbs7hlqb73xypd13p5zj519y0zcydqkf25391sp"; depends=[bayestestR datawizard insight]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; periscope = derive2 { name="periscope"; version="0.6.3"; sha256="0iq0pklipli54bdgl8wl0mnm7a6ik90j0gwqks237phly23njwal"; depends=[DT ggplot2 lubridate shiny shinyBS shinydashboard writexl]; }; @@ -13081,15 +13623,15 @@ in with self; { permGPU = derive2 { name="permGPU"; version="0.15"; sha256="1bxydc5dw7ka45k6ban35d5xb1dw9yq9480qns8b39cc0x3acmhc"; depends=[Biobase foreach RUnit survival]; }; permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; permPATH = derive2 { name="permPATH"; version="1.2"; sha256="074knhcn88nzisfl20ais71micnnjqbm5lqp6jfkqj176r2af7cq"; depends=[R2HTML xtable]; }; - permimp = derive2 { name="permimp"; version="1.0-1"; sha256="0sz7m1h29k3ay6nkkqddb9ac4mhpmd6ad3nn7n3nb863j0f53mv4"; depends=[ipred party randomForest survival]; }; + permimp = derive2 { name="permimp"; version="1.0-2"; sha256="1zq513bkallkkqghjilvgc5iw0pcglrdyc0r2sns4ck07a3q378j"; depends=[ipred party randomForest survival]; }; permubiome = derive2 { name="permubiome"; version="1.3.1"; sha256="0a4swfkmqqr8a1psc6rlnxnpm43fj42gjkikcqy8d84wrfz2wrr9"; depends=[dabestr ggplot2 gridExtra Matrix rlang]; }; permuco = derive2 { name="permuco"; version="1.1.0"; sha256="1mp3yp4p1b382c31a3jcmq1n90zvb1lggacb3zdblpmz1yrj4v1c"; depends=[Matrix permute]; }; permutations = derive2 { name="permutations"; version="1.0-9"; sha256="1701jah8i9frw3cbqlri2l56lansw54l3pp9h1fy36a8ahhcllkg"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-5"; sha256="0ra8p5mf2590azrkas8z2ry7mif77xqxd29n4zgyi5vll225726j"; depends=[]; }; - permutes = derive2 { name="permutes"; version="2.0.1"; sha256="0pdw92vxda61rpwhhybr5ngayp2yl7v286rayw0xf42c3gs9dmf9"; depends=[plyr]; }; - perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; + permutes = derive2 { name="permutes"; version="2.1.1"; sha256="03ij758s0gc9505cggnx7zg6vfbmx7rvkc3rlxrpzyz4aa12ihb1"; depends=[plyr]; }; + perry = derive2 { name="perry"; version="0.3.0"; sha256="0g54m7cg9vkdrfqk339ylas6riyjp8scr6mwjnss1gcvqj378gs8"; depends=[ggplot2]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; - personalized = derive2 { name="personalized"; version="0.2.5"; sha256="073mi3g0khba1s8wz01h1xc0zxq0yr05nflf15nss2rv7lh2qazb"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; + personalized = derive2 { name="personalized"; version="0.2.6"; sha256="1pakg7c8h3cijm3n8x433isbmwa78gmg42xpkdvpabv2fx7jlday"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; personalized2part = derive2 { name="personalized2part"; version="0.0.1"; sha256="104flqjyf0x0619msyc0vlkg61znvhf0v86fsdpksdxkgwb7wv7j"; depends=[foreach HDtweedie personalized Rcpp RcppEigen]; }; personalr = derive2 { name="personalr"; version="1.0.1"; sha256="119askhfcb7jb5zvckk4vq51jsnzrqxrang7i2lgvszqwd9s35f1"; depends=[desc devtools fs glue magrittr purrr rprojroot rstudioapi usethis withr xfun]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; @@ -13103,25 +13645,27 @@ in with self; { petrinetR = derive2 { name="petrinetR"; version="0.2.1"; sha256="0h9nsjsj87b6qvvkg81kn0j2c4xkzq89sddp9l6pjh636bdqwf8i"; depends=[DiagrammeR dplyr purrr visNetwork xml2]; }; pewdata = derive2 { name="pewdata"; version="0.3.2"; sha256="1a4ci8hzpmwxs48lsppswcwkxv72yn44w486m9izwvx8wr1nlh2d"; depends=[foreign magrittr purrr rio RSelenium stringr]; }; pexm = derive2 { name="pexm"; version="1.0.0"; sha256="1043pqn4irpmjv2ywqfpmp45lmx6ad2rr15cnr5sizxg9bjl1vjv"; depends=[coda msm rjags]; }; - pez = derive2 { name="pez"; version="1.2-2"; sha256="1c9gicg1g85x29y5kh2fkp0c2r923wc00hdw1b9rzfv0hgscbcxb"; depends=[ade4 animation ape caper FD Matrix mvtnorm phytools picante quantreg vegan]; }; + pez = derive2 { name="pez"; version="1.2-3"; sha256="07d4p2nz19ncd7bbf5facfym5h6rriayrcflx5sjb1f8ni63f98j"; depends=[ade4 animation ape caper FD Matrix mvtnorm phytools picante quantreg vegan]; }; pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; - pfica = derive2 { name="pfica"; version="0.1.1"; sha256="04gq5zwsqf33gv73k4mh74cn149jqzk1qq922zv2bpd2dva1xdn2"; depends=[corpcor fda moments]; }; + pfica = derive2 { name="pfica"; version="0.1.2"; sha256="0v6wz2ig88z4pvwkmsxniy7cl2415091r6kn17dbgaw2qwqxgbxn"; depends=[corpcor expm fda moments]; }; pgTools = derive2 { name="pgTools"; version="0.1.0"; sha256="0bjms06r9ssww3j4129c3khgnsj13dnb4xv2r9zcw66i94jkqn6v"; depends=[data_table DBI]; }; pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; pgdraw = derive2 { name="pgdraw"; version="1.1"; sha256="1s1b1izpgryrqsjkdh3yvr137054sipj3kwdkzlx2af8xjr53f85"; depends=[Rcpp]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; pgirmess = derive2 { name="pgirmess"; version="1.7.0"; sha256="1kh5vca2bnaa5yzazbhmhyw097x1v7b61cr6zxk3lxn9w6vqdhiy"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; - pglm = derive2 { name="pglm"; version="0.2-2"; sha256="0n0wkc5fn9g3jgx070l23dv7ir2k8kz1302q0dawx4pzr4wdwrq0"; depends=[Formula maxLik plm statmod]; }; + pglm = derive2 { name="pglm"; version="0.2-3"; sha256="16ghdgnpwyqgfa6z6gc93bw933dvazb3alv1867cbn7qnp2gaj3j"; depends=[Formula maxLik plm statmod]; }; pgmm = derive2 { name="pgmm"; version="1.2.4"; sha256="1bpknwfzw6rmag5s7ajg1glx46wkby5ahyya76ksa7r8vz4ffs3z"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; pgraph = derive2 { name="pgraph"; version="1.6"; sha256="1mfpyj4ahs5szkzzv5fs9g26651vcnign3mkfgp23g8nlrs50cqa"; depends=[energy glasso glmnet SAM]; }; pgsc = derive2 { name="pgsc"; version="1.0.0"; sha256="1y4szqn1jhp3yn8q738dpbhnqcqk45vgbmczamai154w3wb0qai7"; depends=[nloptr Rcpp RcppArmadillo reshape2]; }; + pguIMP = derive2 { name="pguIMP"; version="0.0.0.2"; sha256="0mdw56n0fz5hcrvs2b6wxvkzclqz672kx3z53mkxhjdx7g7nx968"; depends=[bbmle DataVisualizations dbscan dplyr DT e1071 finalfit ggplot2 ggthemes gridExtra Hmisc magrittr MASS mice nortest outliers plotly psych purrr R6 rcompanion readr readxl rJava rlang rmarkdown robust RWeka shiny shinydashboard shinyjs shinyWidgets stringr tibble tidyr tidyselect VIM writexl]; }; ph2bayes = derive2 { name="ph2bayes"; version="0.0.2"; sha256="1xm7930gycxrz308dnfnp023yidqik52sbrli35f3773mnfcid2g"; depends=[Rcpp]; }; ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; }; ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; ph2rand = derive2 { name="ph2rand"; version="0.1.0"; sha256="0k6azygcvzkirjx3vpx6kbhax1yai8r467kmmnvhh3p0v46mc5zp"; depends=[dplyr ggplot2 Rcpp scales tibble tidyr]; }; - phangorn = derive2 { name="phangorn"; version="2.7.0"; sha256="19113x95vq09168x6v4ryfcdrb3a4ckp8rimd43sdkmz9pkfdxkx"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; - pharmaRTF = derive2 { name="pharmaRTF"; version="0.1.2"; sha256="0zaik245vcykg2jp04lfa9lk9qqkk2mvpzdvk4v402s5rg6xkd7l"; depends=[assertthat huxtable purrr stringr]; }; + phangorn = derive2 { name="phangorn"; version="2.7.1"; sha256="160kks4bg4iwy8g234g6aiiqbvz7ki5k9csyax3kjv7ia5wddafq"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; + pharmaRTF = derive2 { name="pharmaRTF"; version="0.1.3"; sha256="0ppwkk2fknabhk8fiqk5wb7zh5pdpvs6r2i4pln7wz8633r2vfiq"; depends=[assertthat huxtable purrr stringr]; }; + phase = derive2 { name="phase"; version="1.2.1"; sha256="1gh6xaymw3236d719jg6vl7yrdvnl5i276qhaksbb6axh3nnmgdb"; depends=[behavr circular lubridate plotly pracma signal zeitgebr zoo]; }; phase1PRMD = derive2 { name="phase1PRMD"; version="1.0.2"; sha256="0gr73nsp0an0ci6l86h9fw6l791jdw0b1497qi58w25zypggdyac"; depends=[arrayhelpers coda dplyr ggplot2 gridExtra kableExtra knitr MASS plyr RColorBrewer reshape2 rjags]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.9"; sha256="0dnyqa6jias2jqjqjpiq32jnd21ghb2shw45vdq8b5xyb8rxclwj"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; phaseR = derive2 { name="phaseR"; version="2.1.3"; sha256="1xqh6k8zl0jc2srklb8vg57f88kssm80b286asg2cawanj06qs2k"; depends=[deSolve]; }; @@ -13142,14 +13686,14 @@ in with self; { phenopix = derive2 { name="phenopix"; version="2.4.2"; sha256="0rrp4ch32hzlm727xpwsvfsw7d4qypv7iiq8hrg9az6nb39pbvp7"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster sp stringr strucchange zoo]; }; phiDelta = derive2 { name="phiDelta"; version="1.0.1"; sha256="0g1g5516p8i1gfpvsy75rdirib8sx1ki2mbf1cvgsnzh70h72gbv"; depends=[]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; - philentropy = derive2 { name="philentropy"; version="0.4.0"; sha256="09vi6mfcig397226kq2fgymwg5ng8iysi6b2f616masscgshplxz"; depends=[dplyr KernSmooth Rcpp]; }; - phillydaodata = derive2 { name="phillydaodata"; version="1.0.1"; sha256="1pw1c77x507shwv3j1h0bqj354rrm08rl6xpj1jgqnfih6f5kif8"; depends=[data_table janitor]; }; + philentropy = derive2 { name="philentropy"; version="0.5.0"; sha256="0bs1kk28gjmplnk257cy064hwy360lc378dj4dz3gwsqaj19m7mk"; depends=[dplyr KernSmooth Rcpp]; }; phm = derive2 { name="phm"; version="0.1.2"; sha256="0jm4w2rj80jz24134y8sj6w7f2icdizs644zfbiq77vzfj1mg8i6"; depends=[data_table shiny slam tm]; }; phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; phonenumber = derive2 { name="phonenumber"; version="0.2.3"; sha256="1gwh7cg1zyy197sj16wcxqyz2rx5z83cd4rwmf22ycpgvz2dwzw9"; depends=[]; }; phonfieldwork = derive2 { name="phonfieldwork"; version="0.0.11"; sha256="0a5qnl1r8g0h1nsp22awp6hy0lkdi6adc729grpz8mbniz4vdlkc"; depends=[phonTools rmarkdown tuneR uchardet xml2]; }; - phonics = derive2 { name="phonics"; version="1.3.9"; sha256="1625jysaf1r06bicz5zyzq6lawr8b0yylaj9v314b0mcgkvn8i12"; depends=[BH data_table Rcpp]; }; + phonics = derive2 { name="phonics"; version="1.3.10"; sha256="1g4gmfz190xaj800gawl79fzhmgimssa31kqzw8a70scp5psz3fw"; depends=[BH data_table Rcpp]; }; + phosphoricons = derive2 { name="phosphoricons"; version="0.1.1"; sha256="0krb1gl5h6k6m289f0hjizrx6ysmv21z9a4h7k6fip0r26fjili6"; depends=[htmltools]; }; photobiology = derive2 { name="photobiology"; version="0.10.6"; sha256="12j880bmhslnsl67ad8f7df0fzyqlc5pxdsqywy5807rxkl7ir4g"; depends=[dplyr lubridate plyr polynom rlang splus2R stringr tibble tidyr zoo]; }; photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.5.2"; sha256="0n987klwyj06xikmvg9cvsjzrxll1d7p358jw4ls0j46byki98s5"; depends=[photobiology]; }; photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.22-1"; sha256="1dqjlcra3vqydxjf6rwha6y1bykkpqwf8bqjkljs4kb89642qbv1"; depends=[colorSpec dplyr lazyeval lubridate photobiology readr readxl stringr tibble tidyr]; }; @@ -13159,7 +13703,7 @@ in with self; { photobiologySensors = derive2 { name="photobiologySensors"; version="0.5.0"; sha256="122cfy6nsxngd8hnbq5frkgnzrb9fxw83l7mfwk0wy6gx7zsfx5s"; depends=[photobiology]; }; photobiologySun = derive2 { name="photobiologySun"; version="0.4.1"; sha256="15wp8q29m5c4qplind9098ikxmm1r60lw8cm0pa48lmh33638ia3"; depends=[photobiology]; }; photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.4"; sha256="04bl72jaxm7vfvzss3wxjqf7p4l6rrqv11a7gqyfg0xqy18clnhx"; depends=[photobiology]; }; - photosynthesis = derive2 { name="photosynthesis"; version="2.0.0"; sha256="1q6wcl2fl7mwf27v5yljk8alrz4jvbhybxxrqgi1c41qbs6581yz"; depends=[checkmate crayon dplyr furrr future ggplot2 glue gunit magrittr minpack_lm nlme pkgnet purrr rlang stringr tealeaves tidyselect units]; }; + photosynthesis = derive2 { name="photosynthesis"; version="2.0.1"; sha256="0drbic4sdx841pzcqvi0gkny7qrnzixlc0wsr6m0llh7pfyl99s6"; depends=[checkmate crayon dplyr furrr future ggplot2 glue gunit magrittr minpack_lm nlme pkgnet purrr rlang stringr tealeaves tidyselect units]; }; phreeqc = derive2 { name="phreeqc"; version="3.6.3"; sha256="0z20gj1kqhnbvx33sswz5ivj7nk2p4hia4gr2npscs94nc50b5j4"; depends=[]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; phyclust = derive2 { name="phyclust"; version="0.1-30"; sha256="0fy9q95vmlm9idpax7alhpfwn30gflnc9md72g91jypyxkx5nr7p"; depends=[ape]; }; @@ -13183,16 +13727,17 @@ in with self; { phyr = derive2 { name="phyr"; version="1.1.0"; sha256="0jvjxvxx2nz9ra9vp00bmm3dxr2am4zs8cvxij8w4jjyskznxc96"; depends=[ape dplyr gridExtra latticeExtra lme4 Matrix mvtnorm nloptr Rcpp RcppArmadillo tidyr]; }; phyreg = derive2 { name="phyreg"; version="1.0.2"; sha256="0m1psq79zl7h8791pl8g6i0ybda7vgddza8r9mwqhg4sw1q4bzcp"; depends=[]; }; physiology = derive2 { name="physiology"; version="1.2.1"; sha256="1z7xymwgj7bqn0yvcz3q8pvwhpr5vx5qd0x8sayal1vgpqc0nccb"; depends=[Rcpp]; }; - phytools = derive2 { name="phytools"; version="0.7-70"; sha256="1lzhk7mkixwp6ixd5hsn3zglw110phgdisrb57qwcp3f00xjqhz3"; depends=[ape clusterGeneration coda combinat expm gtools maps MASS mnormt nlme numDeriv phangorn plotrix scatterplot3d]; }; + phytools = derive2 { name="phytools"; version="0.7-90"; sha256="1lg06ynhllk7ajv7z6bfsbbwm5lc4dfn3xhaiwlmzbv0jxq5lqa8"; depends=[ape clusterGeneration coda combinat expm maps MASS mnormt nlme numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; piRF = derive2 { name="piRF"; version="0.1.0"; sha256="04k09ylc6hqw57dlv7sfnisn1167dr550y1j9xl7prvlf3jksg06"; depends=[Rdpack]; }; picante = derive2 { name="picante"; version="1.8.2"; sha256="19savjzj44b7ifdxcp02ynj22z4n4ikq2aipc74ljzy3yykmqmjn"; depends=[ape nlme vegan]; }; picasso = derive2 { name="picasso"; version="1.3.1"; sha256="1z7zm88wjp7fia7054l7i55f152iddrjj9wbcpcskhc8s6kfg53c"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.50"; sha256="05s3xqf95d4avh7gkr49jsm8jzacbv694c3wgppkkc40zip6vkc7"; depends=[DoE_base FrF2 FrF2_catlg128 ggplot2 png]; }; - piecepackr = derive2 { name="piecepackr"; version="1.7.2"; sha256="1bwbazgn6hi3rlbfxmvywdqd3h4p5sfa539mnl812l7mb3diflkv"; depends=[backports gridGeometry grImport2 jpeg png purrr R6 stringr tibble]; }; + piecemaker = derive2 { name="piecemaker"; version="1.0.0"; sha256="0qm9bbsxfmiycbhappzpm98arlwnbck29c75xjyg03m1dbfykvnk"; depends=[purrr rlang stringi stringr]; }; + piecepackr = derive2 { name="piecepackr"; version="1.8.1"; sha256="1ckcjx36kk5zsfblq663aq31fj0bpkyp0k3fyl7snrxhm4gzjcgi"; depends=[backports gridGeometry grImport2 jpeg png purrr R6 stringr tibble]; }; piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.1.2"; sha256="1qxwc1drx26p4cgymrfjmg5i7ypl7gddv40virkpmc0qaag9pq36"; depends=[car DiagrammeR emmeans igraph lme4 MASS multcomp nlme]; }; - piggyback = derive2 { name="piggyback"; version="0.0.11"; sha256="17cmkzp4g5gcapab3g5jxpabsmw4s3zsizqd99bh36xyw76v1jds"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; - pillar = derive2 { name="pillar"; version="1.6.0"; sha256="1pfa6q63ji6mqsvkbpjvvlaivw66nyinwbk82jh0a0c6dy41w47i"; depends=[cli crayon ellipsis fansi lifecycle rlang utf8 vctrs]; }; + piggyback = derive2 { name="piggyback"; version="0.1.1"; sha256="1d448hkk772d21ix1l1cgq2a0spyjnppyrn1myjcv3dcrfxndn83"; depends=[clisymbols crayon fs gh httr jsonlite lubridate memoise]; }; + pillar = derive2 { name="pillar"; version="1.6.2"; sha256="1666n7q95apfmk9nii090y23si5s07nhhw0gpzd24sagzw689lfs"; depends=[cli crayon ellipsis fansi lifecycle rlang utf8 vctrs]; }; pim = derive2 { name="pim"; version="2.0.2"; sha256="0kwlm6n23ccs0jz4plsqprg6inj3qv74zhvg9gpxyj3ksvdxp58i"; depends=[BB nleqslv]; }; pimeta = derive2 { name="pimeta"; version="1.1.3"; sha256="1mx0m438db4n041bns6sm8sr8vrj6w8b2kvpmrkkp0bly2vpv40q"; depends=[ggplot2 Rcpp RcppEigen scales]; }; pinbasic = derive2 { name="pinbasic"; version="1.2.2"; sha256="0mcw68wrixz2jf62nfifdgg8bnp4h1p3byivz28wi61blj8iaa75"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; @@ -13218,24 +13763,25 @@ in with self; { piton = derive2 { name="piton"; version="1.0.0"; sha256="1krf6zi238m275nxjlpyayv8y2drbgs2kg19dpkqm0lmlz5y5ar8"; depends=[Rcpp]; }; pivmet = derive2 { name="pivmet"; version="0.4.0"; sha256="1svy6va5za7svinh77vhhhd05n8rr1s1ayjqcgxhssd8j98ckmxd"; depends=[bayesmix bayesplot cluster corpcor MASS mclust mvtnorm rjags rstan runjags]; }; pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.2.0"; sha256="141aaanb00qc3z4mdws42zhg7j6bcd2i1gp6nf6h6h7ikkmr0v0y"; depends=[curl httr]; }; - pivottabler = derive2 { name="pivottabler"; version="1.5.1"; sha256="0jczgm1fkm4rrxh3zjzixjl3hsxwf8wmhf7d7ch4vy6s3l5g9hy2"; depends=[data_table dplyr htmltools htmlwidgets R6]; }; - pixarfilms = derive2 { name="pixarfilms"; version="0.2.0"; sha256="1543rzr0r4cwq9l5y09h8w22w0mba17qy9k6byirg8raagp8lmxj"; depends=[tibble]; }; + pivottabler = derive2 { name="pivottabler"; version="1.5.3"; sha256="0j19y4pq0y6li21fwf1sdbzy16gddjlllj9laaslsxp76zc1sjnl"; depends=[data_table dplyr htmltools htmlwidgets R6]; }; + piwikproR = derive2 { name="piwikproR"; version="0.2.0"; sha256="07iwsqxc8x5nr1gwgipj765c3nh375rbi32adb3qk25yx8pwf9fd"; depends=[digest dplyr fs httr lubridate magrittr purrr readr rjson rlang stringr tibble urltools]; }; + pixarfilms = derive2 { name="pixarfilms"; version="0.2.1"; sha256="1qycg7ar9l3myj14xvidxrm9svdf5xmw7ss0m33q266nzwssiqpk"; depends=[tibble]; }; pixelpuzzle = derive2 { name="pixelpuzzle"; version="1.0.0"; sha256="1bgy9anhgmjfy97816g2ns5pg5vsm7dwdn5l01m2zma6qnq01knm"; depends=[beepr cli stringr]; }; pixels = derive2 { name="pixels"; version="0.1.1"; sha256="1vvahrajm8ys5vgfc0iyzj2a6vzvgaakkj6i0m2sy40l2w44dn0q"; depends=[htmlwidgets miniUI shiny]; }; pixiedust = derive2 { name="pixiedust"; version="0.9.1"; sha256="1jy3xr4wpfs8j3giyia1kwrb5nlmqjbjwvj9qpax6izmcdk4srz2"; depends=[broom checkmate htmltools knitr labelVector magrittr reshape2 scales]; }; pixmap = derive2 { name="pixmap"; version="0.4-12"; sha256="1v1a1adsgh5jlvvi98j4nhb1h681s97ip76zdrga12rlsjaahfw9"; depends=[]; }; pkdata = derive2 { name="pkdata"; version="0.1.0"; sha256="1kmcalidw2zidd6i8ds0k057b3187by2k8z6764va43d5garbbcv"; depends=[lubridate]; }; - pkgKitten = derive2 { name="pkgKitten"; version="0.2.1"; sha256="06ax0snxmpvlc9ps8sixzxp9bg6zwgv93gqgsac3g9m8zncm6a66"; depends=[]; }; + pkgKitten = derive2 { name="pkgKitten"; version="0.2.2"; sha256="0rappcycpkdfdivzl6nn3jq1f42r9jqqmkb33asvhmpjs35fyc3s"; depends=[]; }; pkgbuild = derive2 { name="pkgbuild"; version="1.2.0"; sha256="0qx920h2viwjg10va81nj0xja495d8ni6vcc25ggvzki6a6k069f"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; - pkgcache = derive2 { name="pkgcache"; version="1.2.1"; sha256="1rb75n5gjvvn8jyynvkcjnxci14czjhrja9n2b7qkpx61h1w90cd"; depends=[assertthat callr cli curl digest filelock glue jsonlite prettyunits processx R6 rappdirs rlang tibble uuid]; }; + pkgcache = derive2 { name="pkgcache"; version="1.2.2"; sha256="0jz3z1sxqksncisnvlnmq7ygmabh4sppjanhgk2gsqglq2zpyw4x"; depends=[assertthat callr cli curl digest filelock glue jsonlite prettyunits processx R6 rappdirs rlang tibble uuid]; }; pkgcond = derive2 { name="pkgcond"; version="0.1.1"; sha256="03a4blq3niw1mljzylamvmr3l43czqlww4i6n7zb0dlym9x8gs1w"; depends=[assertthat]; }; pkgconfig = derive2 { name="pkgconfig"; version="2.0.3"; sha256="0l1qph8zyi2sic3k2qcd7vlfl7rzfh1q7z7zvjkl5f7y1x2fy3rk"; depends=[]; }; - pkgdepends = derive2 { name="pkgdepends"; version="0.1.0"; sha256="12l82a7n271fk31k0q04ljcrybh0pmr55c8dfvnnammky325bf4f"; depends=[callr cli crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble withr zip]; }; + pkgdepends = derive2 { name="pkgdepends"; version="0.1.2"; sha256="0yj0h5brkl333rs0cz1cfnn5b6ahz4130ijzz15jwxlb37yq3xy4"; depends=[callr cli crayon curl desc filelock glue jsonlite lpSolve pkgbuild pkgcache prettyunits processx ps R6 rematch2 rprojroot tibble withr zip]; }; pkgdown = derive2 { name="pkgdown"; version="1.6.1"; sha256="1k31biyvxkv3xjc1yy3nzb9wfza3vbx97fv17nly5a6vlv7zqbs4"; depends=[callr crayon desc digest downlit fs httr magrittr memoise openssl purrr ragg rematch2 rlang rmarkdown tibble whisker withr xml2 yaml]; }; - pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.3"; sha256="1xashx86ks0sb5hj7hyf71zml2a5gj13avhkyg9n63mjhsw792k1"; depends=[downloader rappdirs]; }; + pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.4"; sha256="1fr650yb4wjz6flq4f8p2p5bck5q4kkrhlhlwjn832payq9p4zsp"; depends=[downloader rappdirs]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.3"; sha256="1isiywgm20rypc5qr03p0k7lis76zzd96x5ncbvia644d2n13brm"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; - pkglite = derive2 { name="pkglite"; version="0.1.1"; sha256="1kfy9bn8hf31m4h95mglqbxya3hk3n6s4y1hlz9n43sqiy5dyz4k"; depends=[cli magrittr remotes]; }; - pkgload = derive2 { name="pkgload"; version="1.2.1"; sha256="0ghpkv0p0xz4gpm49sywhvahhzwdakfb5kqm6yz8s1fr5gdpy9z6"; depends=[cli crayon desc rlang rprojroot rstudioapi withr]; }; + pkglite = derive2 { name="pkglite"; version="0.2.0"; sha256="1qjym8kkbmzdz46xn6a4ir8b07ws30s3m7zdrgh98nf0vrv9bkj8"; depends=[cli magrittr remotes]; }; + pkgload = derive2 { name="pkgload"; version="1.2.2"; sha256="0yxvik8kij0mqlki46hf6xnbfvmxwk0r2a3zwjpg0fwcd2s835a8"; depends=[cli crayon desc rlang rprojroot rstudioapi withr]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.32.2"; sha256="14ggsd24n5g5rvn0wl4w90ipxzmywqikh28llj89q6kpxwnv4iff"; depends=[assertthat codetools digest registry stringr withr xtable]; }; pkgndep = derive2 { name="pkgndep"; version="1.0.3"; sha256="15kxzgq1v73rzccj9hng3zj775x27w04j31dcn2bhnnqzi8xviy5"; depends=[callr ComplexHeatmap crayon GetoptLong]; }; pkgnet = derive2 { name="pkgnet"; version="0.4.1"; sha256="194ynbhq6k7gp8l4ccq6m37qhhf791ynbppjh77cc0q50w2jz387"; depends=[assertthat covr data_table DT futile_logger glue igraph knitr magrittr R6 rlang rmarkdown visNetwork]; }; @@ -13245,7 +13791,7 @@ in with self; { pkmon = derive2 { name="pkmon"; version="1.0"; sha256="0j2v4zlf7vgy5gld29xiii15m9i85cpiwc25rmzjm02cz2p32c72"; depends=[]; }; pkr = derive2 { name="pkr"; version="0.1.2"; sha256="0m045dlcq3rls1w0smy4jvk3c57ckpqdv8xnz261k1gnnyjmz1k2"; depends=[binr foreign forestplot rtf]; }; pks = derive2 { name="pks"; version="0.4-1"; sha256="1lwm65s2b9y6vr1yr683n535yz8hbzc6j289a6yp45v2yai72m07"; depends=[sets]; }; - pksensi = derive2 { name="pksensi"; version="1.2.0"; sha256="0dfvgwsq0mdf90m605y7q4bl1f4zp5i15897wvwdvfin9l5m87v2"; depends=[data_table deSolve doParallel dplyr foreach getPass ggplot2 magrittr reshape]; }; + pksensi = derive2 { name="pksensi"; version="1.2.2"; sha256="1papwi3ivlrk53aiqr9bpmfd96f7d8bpf22q6s8s25gb7sichlm0"; depends=[data_table deSolve doParallel dplyr foreach getPass ggplot2 magrittr reshape2]; }; plRasch = derive2 { name="plRasch"; version="1.0"; sha256="1rnpvxw6pzl5f6zp4xl2wfndgvqz5l3kiv9sh4cpvhga0gl8zjaw"; depends=[survival]; }; plac = derive2 { name="plac"; version="0.1.1"; sha256="08kqnjzbfygnbqvqg5wyw148kfhjqxy46y4vaiq9zzwzj58w8vzn"; depends=[Rcpp RcppEigen survival]; }; placer = derive2 { name="placer"; version="0.1.3"; sha256="0d7b6mkyyrcjn1pqxlj9mjis6vzks986i7vhc8ffkp8hz8sc7271"; depends=[]; }; @@ -13258,25 +13804,26 @@ in with self; { plantecowrap = derive2 { name="plantecowrap"; version="1.0.4"; sha256="0syxf63xy5whzw03ys5cxyw7689mr7ihgmqddv53jb8rlbwm84p8"; depends=[ggplot2 minpack_lm plantecophys tidyr]; }; plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; }; plater = derive2 { name="plater"; version="1.0.3"; sha256="1sjf1wkpgz5pa5z149bj40haa4srvf4a66rh3ij25bvgasslshfq"; depends=[dplyr rlang]; }; - platetools = derive2 { name="platetools"; version="0.1.3"; sha256="1c0bxgfa31sgb6mg8nnqx6pp18262walar1lxcg2dpjhzqlgzn0c"; depends=[ggplot2 RColorBrewer]; }; + platetools = derive2 { name="platetools"; version="0.1.5"; sha256="0qzq7r8ff27cwmxw649jvk9irm6ny2mz4ylmrpzdkahkskfb5arj"; depends=[ggplot2 RColorBrewer]; }; platowork = derive2 { name="platowork"; version="0.0.1"; sha256="09ps20lqli50nhhd3368fwf8cjsbshn428fbbbckbxnynxk5cwsy"; depends=[]; }; plde = derive2 { name="plde"; version="0.1.2"; sha256="1g1b1sgyfxgfkjcr3sdkan8jd6r7yyi0izc83vyj11bdk08jx22h"; depends=[]; }; - pleLMA = derive2 { name="pleLMA"; version="0.1.0"; sha256="0fr0n4lja5bzzlkhh2j7d4j1mnnh37cz9ixq7mzhpm92dn7a0mj7"; depends=[mnlogit]; }; + pleLMA = derive2 { name="pleLMA"; version="0.1.1"; sha256="1ymbcq7pdz1ls2qc9nzpyvqdwli4ayllwvdzcl0f4cfyr2w4yv3a"; depends=[mnlogit]; }; pleio = derive2 { name="pleio"; version="1.6"; sha256="0av1sl0fdn2ia7ddalbvidhcnsvs36iq618s1bknjw29y5yyq020"; depends=[Matrix rms]; }; pleiotest = derive2 { name="pleiotest"; version="1.0.0"; sha256="05mgz42wn1y7q8ffgvak22r3k40q9rv1qvpal8yycp83p7hdzg7v"; depends=[RColorBrewer Rcpp RcppArmadillo]; }; plfMA = derive2 { name="plfMA"; version="1.0.5"; sha256="13hs06n4b28vlik9bzqdx6j85q05bsd6hb10cr39581a3m33rv5m"; depends=[cairoDevice gWidgets2 gWidgets2RGtk2 limma RGtk2]; }; plfm = derive2 { name="plfm"; version="2.2.2"; sha256="1jgf3jrkdpsf77i4lf68s6sxax95c9is4nryhnzanq9i5f23j24v"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; + pliman = derive2 { name="pliman"; version="0.3.0"; sha256="0jvsnxq7px2hi1mw6ci56p7jpm7jj8ic1j95r3mwvksn6ajc8kn3"; depends=[EBImage ggplot2]; }; plink = derive2 { name="plink"; version="1.5-1"; sha256="0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0"; depends=[lattice MASS statmod]; }; plinkFile = derive2 { name="plinkFile"; version="0.1.0"; sha256="0803hp822v9rqh4h437q2nmab19yamc4dbyi6iimm67ykp0d5xss"; depends=[]; }; - plinkQC = derive2 { name="plinkQC"; version="0.3.3"; sha256="0qqqq1j0j8zg6zx11p862cav58kfp93nbhmn0zfxn37k22x55lnq"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; - plm = derive2 { name="plm"; version="2.4-1"; sha256="0dan5g4hnyz0qlklgg4fcppjazwiz7h3kzvgvjkp1cmljii5j336"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; + plinkQC = derive2 { name="plinkQC"; version="0.3.4"; sha256="0l5gf7wf33fhzby0n2qzph02v7an2gj2dji1i129hxsxqnynx7dy"; depends=[cowplot data_table dplyr ggforce ggplot2 ggrepel igraph optparse R_utils sys UpSetR]; }; + plm = derive2 { name="plm"; version="2.4-2"; sha256="0srzhhpxx90dp7idjz2zabbd8k1iq4p3n42hm07xm6w5n72wwv43"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme Rdpack sandwich zoo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-2"; sha256="03jjmfr1dwz6p652y917g9rv2alyam9ws6xh9ig02d3w78b0rsv9"; depends=[]; }; plogr = derive2 { name="plogr"; version="0.2.0"; sha256="0a8dhzlna79ggyhfr0nncgh15a9n6r0dsz664pz0ah323wpblqqf"; depends=[]; }; plot_matrix = derive2 { name="plot.matrix"; version="1.6"; sha256="1wx9c46333kz3cgdvczb0ywp8h29p7dmxbim3dv54jv0g5hr6m4n"; depends=[]; }; - plot3D = derive2 { name="plot3D"; version="1.3"; sha256="1jfzndnlci9a975qbcv66jiy2l46hs3f2049654x4jp3i4kyrr5r"; depends=[misc3d]; }; - plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.1"; sha256="12p4qc9vmhr86ssx6xnz3cmx84q5jgd28bw9dp4wjrn04n6l4va6"; depends=[plot3D rgl]; }; + plot3D = derive2 { name="plot3D"; version="1.4"; sha256="1h59zlsyzbjylaziwavppl9bjmnba4iiq34772y3dys6fqclajnh"; depends=[misc3d]; }; + plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.2"; sha256="15m48rzs96mgsnlf77823z2c58gry6hab00xg40myfba8j8li1xa"; depends=[plot3D rgl]; }; plot3logit = derive2 { name="plot3logit"; version="3.1.0"; sha256="0iwhaly6lzpfaanyy1qayl6faihw5rkcnh21czdr1g0f9rjimyrb"; depends=[dplyr ellipse forcats generics ggplot2 ggtern lifecycle magrittr purrr Rdpack stringr Ternary tibble tidyr tidyselect]; }; plotGMM = derive2 { name="plotGMM"; version="0.2.2"; sha256="1cgjajw3dprdlq9ri0gllbxcy33x311mbp9xdds8fgq6cs42ggyb"; depends=[amerika ggplot2 wesanderson]; }; plotKML = derive2 { name="plotKML"; version="0.8-1"; sha256="0a6hrhcsw4zm1y8ksvhf3h9pz0gm0k2fn5r7gsmnxix9p5iv7rkx"; depends=[aqp classInt colorRamps colorspace dismo gstat landmap pixmap plotrix plyr raster RColorBrewer rgdal RSAGA scales sf sp spacetime stars stringr XML zoo]; }; @@ -13284,22 +13831,23 @@ in with self; { plotMElm = derive2 { name="plotMElm"; version="0.1.5"; sha256="0wwqzrpkmq9gzazdzlk62qig6vz43niada6fxh1wcsjqjwkcccgp"; depends=[ggplot2 interactionTest]; }; plotROC = derive2 { name="plotROC"; version="2.2.1"; sha256="0bk8j2lp80zcz4kkig1y5a1ig8vbjh7b4inzc46bn07ns1rdjgzg"; depends=[ggplot2 gridSVG plyr rlang shiny]; }; plotSEMM = derive2 { name="plotSEMM"; version="2.4"; sha256="0fircrayhz92zvkigkyb1zpn07bvssqs1ip15p926zj3rl77fqgy"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; + plotbb = derive2 { name="plotbb"; version="0.0.6"; sha256="0vyp558i0gvr9r3xldkd4ldkd6wx95w7xkkas8cyw0s7i13qqq60"; depends=[magrittr rlang scales]; }; plotdap = derive2 { name="plotdap"; version="0.0.9"; sha256="1jzdlklnl1q32iyspky8k94rgm15nsm4p270q829ljqzq0c7z8z1"; depends=[cmocean dplyr gganimate ggnewscale ggplot2 lazyeval lubridate magrittr maps raster rerddap rgeos scales sf tidyr viridis]; }; plotfunctions = derive2 { name="plotfunctions"; version="1.4"; sha256="0asmxw8283fpvl83h478j5nyg59xqifqaa8f2f6l199gvvswhhg2"; depends=[]; }; plothelper = derive2 { name="plothelper"; version="0.1.9"; sha256="1ibznjqs4gpbq1vx79gg0fkm842xfqgpmmgqji2m6s712j3bdn5k"; depends=[farver ggfittext ggplot2 gridExtra magick plyr scales]; }; plotluck = derive2 { name="plotluck"; version="1.1.1"; sha256="16wqj4xfa8b7kal6v8mp2zlhwf9l3y6y5n44qbpvy652gzb2rw2z"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; - plotly = derive2 { name="plotly"; version="4.9.3"; sha256="0801i2q7sw62x734d58h9p2fwpi1hirqj73gsg18pqkdv4b1lkfl"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr vctrs viridisLite]; }; + plotly = derive2 { name="plotly"; version="4.9.4.1"; sha256="1q711c0lg0jmzrmcc2fhjy70ms49as7cakdbgbh2ij9s149fa7iq"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr vctrs viridisLite]; }; plotlyGeoAssets = derive2 { name="plotlyGeoAssets"; version="0.0.2"; sha256="1c6i4dz5qmym1pcddgffcqgb76jz84252xldprg2caylrqvzv6b7"; depends=[]; }; plotmm = derive2 { name="plotmm"; version="0.1.0"; sha256="01mi9znl471myq1yhfr8kdxpy0l67wgb3fid8gf2rzj5ph72b8hp"; depends=[amerika dplyr ggplot2 patchwork wesanderson]; }; - plotmo = derive2 { name="plotmo"; version="3.6.0"; sha256="1qs1q98cfaqy59dp4hhwnvwlkc4kzd03qp7aprl2hm7r8b2gqnn0"; depends=[Formula plotrix TeachingDemos]; }; + plotmo = derive2 { name="plotmo"; version="3.6.1"; sha256="0hs3w150sqiw550mcyrb3adxcv45wfi0vipxqr38g86cy23hqni4"; depends=[Formula plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; - plotrix = derive2 { name="plotrix"; version="3.8-1"; sha256="0pxfaalwwmnpv19nff0cg6b871m6gjhhmx63fpxm7730z75qh663"; depends=[]; }; + plotrix = derive2 { name="plotrix"; version="3.8-2"; sha256="07xwq3505qb2yak7pfda22yqwifj6m78f8b5rm0ym74808qrawmv"; depends=[]; }; plotrr = derive2 { name="plotrr"; version="1.0.0"; sha256="07ilqpa3ypqb2gpnq23r9v4kkfxz06mcak9si9adr9sf6c7gqwxz"; depends=[dplyr ggplot2]; }; plotscale = derive2 { name="plotscale"; version="0.1.6"; sha256="0h2g0rv1lh70nqmqydgg5swwnwmy08wbjajxyb1c2a716rad765j"; depends=[]; }; plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; }; plpoisson = derive2 { name="plpoisson"; version="0.2.0"; sha256="0x0vcmr7y2rp5lz4r97vjp8cn1l297hcimwf691a2l60m8s856hz"; depends=[]; }; - pls = derive2 { name="pls"; version="2.7-3"; sha256="0b3ls12w19wc4xkhnsgmb333y9lyzwq3syjc3k8zs1agnw59c7cg"; depends=[]; }; + pls = derive2 { name="pls"; version="2.8-0"; sha256="1gqq8rcq6p0hs2gfzwfj690rz3pwywmnv8qzcv0wsd6aaqkskwzg"; depends=[]; }; plsRbeta = derive2 { name="plsRbeta"; version="0.2.6"; sha256="12i1krzvza8wjbafc8rx68hqmrj215mip39xg7sn6nifxi93pi1y"; depends=[betareg boot Formula MASS mvtnorm plsRglm]; }; plsRcox = derive2 { name="plsRcox"; version="1.7.6"; sha256="0dg4vpy15z4x61qyqc9nvqa1788g6phlrzjrk1xhns5x2h8cicma"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; plsRglm = derive2 { name="plsRglm"; version="1.3.0"; sha256="1szx8kjqg47hw1b03n6rs8rydn1698s64j45q8bly7kpfxqmxvsr"; depends=[bipartite boot car MASS mvtnorm]; }; @@ -13315,6 +13863,7 @@ in with self; { plugdensity = derive2 { name="plugdensity"; version="0.8-3"; sha256="1jdmq4kbs8yzgkf9f5dc7c8c52ia68fgavw7nsnc2hnz5ylw1qy9"; depends=[]; }; plumber = derive2 { name="plumber"; version="1.1.0"; sha256="0rwr3vx0y2n70bz4aqd9iag9s0ksz4vlvsw16qz84wfcky1b79pi"; depends=[crayon ellipsis httpuv jsonlite lifecycle magrittr mime promises R6 rlang sodium stringi swagger webutils]; }; plumberDeploy = derive2 { name="plumberDeploy"; version="0.2.1"; sha256="0icl35wck94scjyqw6di2sl6fq7zlvd8hm13fw79iqr0wyrich0r"; depends=[analogsea jsonlite lifecycle ssh]; }; + plumbertableau = derive2 { name="plumbertableau"; version="0.1.0"; sha256="1wkd15l5s7fs1nzyl83s41wbrx87yhklpw1fb6f3llrgbjn8rd77"; depends=[curl debugme glue htmltools httpuv httr jsonlite knitr later magrittr markdown plumber promises rlang stringi urltools]; }; plumbr = derive2 { name="plumbr"; version="0.6.9"; sha256="1avbclblqfy57pd72ximvj3zq92q1w8vszvyf6fw75j5rfwdaibk"; depends=[objectSignals]; }; pluralize = derive2 { name="pluralize"; version="0.2.0"; sha256="1s3jp41j8c03qb5zisj6m12ky7cz3n71d6p5apz0r0yn35inrhah"; depends=[V8]; }; plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; @@ -13330,11 +13879,12 @@ in with self; { pmetar = derive2 { name="pmetar"; version="0.3.1"; sha256="1545gm88p2ym1zj8i4m50f6n8z7g3mx2jqk27kpj81m86kkdbnym"; depends=[dplyr httr lubridate magrittr RCurl stringr tidyr]; }; pmhtutorial = derive2 { name="pmhtutorial"; version="1.5"; sha256="1hcw8hwpsivbhz86lnzy08q9n8vahnq8f7rmi4xkmg6b44582cqx"; depends=[mvtnorm Quandl]; }; pmlbr = derive2 { name="pmlbr"; version="0.2.0"; sha256="1f0i52ws8ywkz4c0s3ax3qa3qinqhv1k9qlghkama3b027zkl9zn"; depends=[FNN]; }; + pmledecon = derive2 { name="pmledecon"; version="0.1.0"; sha256="0bpfx3lkg7wl7b189gl1m2xz72zna98wiw98yx3hvk6ndv55jy03"; depends=[rmutil splitstackshape]; }; pmml = derive2 { name="pmml"; version="2.4.0"; sha256="1mfjpvj2gdkkr3ji0l9x65vsx2y8313ak26cj1dim8c9j26snamw"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.3"; sha256="0315kb5x04pidpzr04yaxyynp0mz4ilzp7vkspq4agjkds5hyc88"; depends=[]; }; pmpp = derive2 { name="pmpp"; version="0.1.1"; sha256="1srmkih6zsyf8yf1f045xy1afcz0if6nf1ncslgrq6rgm7330lkw"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; - pmsampsize = derive2 { name="pmsampsize"; version="1.0.3"; sha256="0i6yqxdrjlwdaghh9lzivqrszy6zfs06kjdfn88yyizy5d7z2k4s"; depends=[]; }; + pmsampsize = derive2 { name="pmsampsize"; version="1.1.0"; sha256="1hqc4xnmlflz3rwsm9yl9ya8i02f8mbqgk8yy2fjxd3y2h7qigfc"; depends=[]; }; pmultinom = derive2 { name="pmultinom"; version="1.0.0"; sha256="0p2amb3y4jl24r21fii1qpmdbn5pfgywrx8k7x1jxpg49rk7k0rp"; depends=[fftw]; }; pmwg = derive2 { name="pmwg"; version="0.2.0"; sha256="1f1r66ml24ys7nx5558c189a4gcaqkr16y87dmi4ravick9l5yfi"; depends=[checkmate coda condMVNorm MASS MCMCpack mvtnorm]; }; pmxTools = derive2 { name="pmxTools"; version="1.2.1"; sha256="0r5y09ab6k31d7fbd5pn8lzaafq1ix2lrjci1bsvg0wwcxmdipw6"; depends=[chron data_tree DiagrammeR dplyr ggplot2 ggrepel gridExtra magrittr MASS stringr xml2]; }; @@ -13343,43 +13893,42 @@ in with self; { pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; }; poLCA = derive2 { name="poLCA"; version="1.4.1"; sha256="0bknnndcxsnlq6z9k1vbhqiib1mlzlx4badz85kc7a3xbrdrfs9f"; depends=[MASS scatterplot3d]; }; pocketapi = derive2 { name="pocketapi"; version="0.1"; sha256="0n4fyx4ldm14zy3pz7gygwhahi3p25misvxlmy8l9kqqr51fg26a"; depends=[dplyr glue httr jsonlite magrittr purrr tibble usethis]; }; - pocrm = derive2 { name="pocrm"; version="0.12"; sha256="0ilh19vqy3lqnb4j6jw61az39swmca8za3ig3k1cjc9gwdyn1f8r"; depends=[dfcrm nnet]; }; + pocrm = derive2 { name="pocrm"; version="0.13"; sha256="0d4iggxjbl95fz872q9v1wr30nga39sdd5dvwa2zrrm73ak81cz3"; depends=[dfcrm nnet]; }; podr = derive2 { name="podr"; version="0.0.5"; sha256="135nq0dw1x6ngf6mxy3yds3xsxhaf5rnv1cmhavlrklhdfygc0a4"; depends=[assertthat DBI dplyr lubridate magrittr odbc plogr RPostgres rstudioapi shiny stringr tibble]; }; poems = derive2 { name="poems"; version="1.0.1"; sha256="15987nz7gx94lrkyizg0jdzkjnib5hykla7xrkg5fi0i6cch40bl"; depends=[abc doParallel foreach gdistance geosphere lhs metRology R6 raster trend]; }; pogit = derive2 { name="pogit"; version="1.2.0"; sha256="1kap1cpfp0k2vm7w4kjfja37n9z3j7ppiwvsdxl6bgpkf7kcnkp2"; depends=[ggplot2 logistf plyr]; }; poibin = derive2 { name="poibin"; version="1.5"; sha256="1sxryvwwz6ldsnkzdy56p8c895s5yvpcai9ndyjv1x5q3l05wf9v"; depends=[]; }; poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; }; - pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; - pointblank = derive2 { name="pointblank"; version="0.7.0"; sha256="1ss6792l9sv9mr2z457b7dv9qrzx8r9wl01iy4rk7gykm7lqflss"; depends=[base64enc blastula cli DBI dbplyr digest dplyr fs glue gt htmltools knitr magrittr rlang scales testthat tibble tidyr tidyselect yaml]; }; + pointRes = derive2 { name="pointRes"; version="2.0.0"; sha256="17rrdcpvd8v95g5vmbyq5gjpcc3rfbq3m6ajzc56fcizcqd4xx52"; depends=[DescTools dplR ggplot2 plyr TripleR]; }; + pointblank = derive2 { name="pointblank"; version="0.8.0"; sha256="1fzi0jp6ldpq91jjnnv15d45bkq8qklpkka2jay3x6q1nv32clgf"; depends=[base64enc blastula cli DBI dbplyr digest dplyr fs glue gt htmltools knitr magrittr rlang scales testthat tibble tidyr tidyselect yaml]; }; pointdensityP = derive2 { name="pointdensityP"; version="0.3.5"; sha256="0n7p3b77m47avbr7n85knf31m9rlp43mdl3748ysj6wvxvhnivx4"; depends=[data_table]; }; pointr = derive2 { name="pointr"; version="0.2.0"; sha256="1qfxcyzi2sa49x00hidz054njj9mm7gkhv99faafb9x4gp3pcq0v"; depends=[stringr]; }; poio = derive2 { name="poio"; version="0.0-4"; sha256="12d47hn9rsx2n0fl107dpswfklnh8nkm0kspcxf7yfljayvxr474"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr purrr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; poisFErobust = derive2 { name="poisFErobust"; version="2.0.0"; sha256="1i6y3745i385y3r45i0xk7ciw1k6brmn709k5qhx8xphq0k4an5n"; depends=[data_table glmmML]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; - poismf = derive2 { name="poismf"; version="0.3.0"; sha256="060qhqwq9qv6x8n78j45kli798xd3gihsayy2vrif2jn2q4ijqs6"; depends=[Matrix]; }; + poismf = derive2 { name="poismf"; version="0.3.1-2"; sha256="0dmz6dy27l7wpq77fxkjqcslvpc6ajjjz1j8r9xd4a7yywclll6p"; depends=[Matrix]; }; poisson = derive2 { name="poisson"; version="1.0"; sha256="1diyf1b84sr6iai3ghd3kcp6fc6w7fan49wzs1lzvxxsmp15ag2d"; depends=[]; }; poisson_glm_mix = derive2 { name="poisson.glm.mix"; version="1.2"; sha256="0328m279jfa1fasi9ha304k4wcybzr7hldww7wn0cl7anfxykbv8"; depends=[]; }; poissonMT = derive2 { name="poissonMT"; version="0.3-5"; sha256="14qkc8qz3423b13gp6gsp8cbb1nv9wwjjfa4i9zc15qy5i99ha26"; depends=[checkmate MASS robcbi robustbase]; }; - poissonreg = derive2 { name="poissonreg"; version="0.1.0"; sha256="0s907j8s1s78944ik2r0qpppj1q58crkz73c9jyalkbd169578fx"; depends=[dplyr glue parsnip purrr rlang tibble tidyr]; }; + poissonreg = derive2 { name="poissonreg"; version="0.1.1"; sha256="0ip17j69b7qfyb691f3qlwydp0qayxrbww63nq8jnh8b92lvvxxs"; depends=[dplyr generics glue parsnip purrr rlang tibble tidyr]; }; poistweedie = derive2 { name="poistweedie"; version="1.0.1"; sha256="0236cz8fn3la7df8mk1la8hmr0zzjc1majnq8p0c8grma833j6kp"; depends=[]; }; poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; }; polaroid = derive2 { name="polaroid"; version="0.0.1"; sha256="0m3jbiz4n7mgbbdkd28m6dqsclyjcgshpxd6ws8df7zchx7fch07"; depends=[argonDash argonR colourpicker ggplot2 hexSticker png shiny shinyWidgets]; }; - policytree = derive2 { name="policytree"; version="1.0.4"; sha256="0g5ww06f8camqyrfva0m98s8my9a4cy231p69wlpb83vgnqm3hcq"; depends=[BH grf Rcpp]; }; + policytree = derive2 { name="policytree"; version="1.1.1"; sha256="0xk3l5cy46br73g8m1gm3dbim72asq0wfsa50mnchkhk42rxv6a3"; depends=[BH grf Rcpp]; }; poliscidata = derive2 { name="poliscidata"; version="2.3.0"; sha256="1ywfhksc6gcc2xk5lp6s8nn4wib92sv7p3wq92dzabf75q6mscix"; depends=[abind car descr gplots Hmisc plotrix plyr survey weights xtable]; }; - polished = derive2 { name="polished"; version="0.3.0"; sha256="0wcigi4x2ry34k0350zvcwm1q0iw1vbd6nvvknl1w1s34fc559vz"; depends=[automagic cli digest dplyr DT htmltools httr jose jsonlite lubridate purrr R6 rlang shiny shinycssloaders shinydashboard shinyFeedback shinyjs shinyWidgets stringr tibble tidyr uuid yaml]; }; + polished = derive2 { name="polished"; version="0.4.0"; sha256="0p49rjxwqz7rgvjcq3gyfmdnmvcl8pb1ihp4fmahm87lai2nl9yb"; depends=[automagic digest dplyr DT htmltools httr jose jsonlite lubridate purrr R6 rlang shiny shinycssloaders shinydashboard shinyFeedback shinyjs shinyWidgets stringr tibble tidyr uuid yaml]; }; polite = derive2 { name="polite"; version="0.1.1"; sha256="15hiifaf63hx0xn453lr0xhdnxqifrgyrgrymp0a9k3j7qja59jk"; depends=[here httr magrittr memoise ratelimitr robotstxt rvest usethis]; }; - politeness = derive2 { name="politeness"; version="0.7.8"; sha256="0nn076p64vah9pcmfkiig6j23zs1vgj36py0vmj5dmn16h391s2h"; depends=[data_table ggplot2 glmnet quanteda spacyr stringi stringr textir tm]; }; + politeness = derive2 { name="politeness"; version="0.8.5"; sha256="05lwzz6x5afycha0gikffr21z6rplvlnrsi3x96pg8n6mfr8xgam"; depends=[data_table ggplot2 glmnet quanteda spacyr stringi stringr textir tm]; }; pollen = derive2 { name="pollen"; version="0.72.0"; sha256="0plxc7rys5q4c1dwammv3b2pnys1hdh5ic0b2ndmv5cbyspf2h0y"; depends=[dplyr lubridate purrr]; }; pollimetry = derive2 { name="pollimetry"; version="1.0.1"; sha256="09zmcwlgzl4fnkdg2m424ibv3izzrm595c7pi4mc3bd1g8sa2ypn"; depends=[brms repmis]; }; - pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; pollster = derive2 { name="pollster"; version="0.1.3"; sha256="1b5m5g9v8xbs3zz6as4xvzwaqr39477adi4vzxmjvxjsaij6ih5h"; depends=[dplyr forcats labelled rlang stringr tidyr]; }; polmineR = derive2 { name="polmineR"; version="0.8.5"; sha256="1jb6j0rmcwzszympzfia8vml55fw2rybj2qcv3f54v3cr9hw13ga"; depends=[data_table DT jsonlite knitr magrittr Matrix pbapply RcppCWB slam stringi tm xml2]; }; polspline = derive2 { name="polspline"; version="1.1.19"; sha256="0rhzf735hmbqfn2xbgcln4sqx7m9far72g5gq9mghgkw016kqglm"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.8.0"; sha256="1f63ikiz988hdihvgd5f2p897qfgv54ysgp2h8avmlc4cj6hgkgl"; depends=[sp]; }; - polyMatrix = derive2 { name="polyMatrix"; version="0.3.1"; sha256="0k62cidsmryg64vbs1ar24m1dknxpddzqvdxbyk3n85r9cx3sqcv"; depends=[MTS polynom]; }; + polyMatrix = derive2 { name="polyMatrix"; version="0.9.16"; sha256="13amrjl0nsyz6d9c9xxgnlkhdiicy8rx27ds5k47r8x48386vz14"; depends=[Matrix polynom]; }; polyPK = derive2 { name="polyPK"; version="3.1.0"; sha256="0cb83sq8iz4swr73vwhh8n4k62p6321nsy1sz5fba0wiicycxf55"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls sqldf xlsx]; }; - polyRAD = derive2 { name="polyRAD"; version="1.4"; sha256="17bjwjmq94ww4xl0x7frmbrn8kkz3gqrq4d644f05n5hx66hsdys"; depends=[fastmatch pcaMethods Rcpp]; }; + polyRAD = derive2 { name="polyRAD"; version="1.5"; sha256="12677bbp9hvdr6nkqnl3gi3db2gn7wjvwwm773bhxln9ymh3jnw0"; depends=[fastmatch pcaMethods Rcpp stringi]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-5"; sha256="0djw49mbhd7x6jr0f5qkb9akw3fw3ax4w9xv8iwa5f65q5gbxpdf"; depends=[gdata]; }; polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-4"; sha256="162xj52566kaxgfk7c14170xx07isyjmqb9skvhrdg7sz20lc3l1"; depends=[coda gtools lattice polySegratio]; }; polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; @@ -13391,68 +13940,72 @@ in with self; { polylabelr = derive2 { name="polylabelr"; version="0.2.0"; sha256="01b2v0l5g8nxwbd6nwqv8ahypgh6gfhd4qabg75brlj7z1iyfzf2"; depends=[Rcpp]; }; polymapR = derive2 { name="polymapR"; version="1.1.2"; sha256="0pgwyw6d7myx0ds5dmfwzrnmvzsm1gkpz9qc241isr9d4cj1dinn"; depends=[doParallel foreach igraph knitr MDSMap]; }; polynom = derive2 { name="polynom"; version="1.4-0"; sha256="1pflscwc0qzdf0y60j7s0dkglgmz18xajywfbn6s263idyr8idy5"; depends=[]; }; + polypharmacy = derive2 { name="polypharmacy"; version="1.0.0"; sha256="1rimhy7z5xglkxfp3yh4vqm5g075n8g09nl4a8nxxf6cyl504gcv"; depends=[data_table doParallel foreach itertools lubridate stringr]; }; polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; }; - polyqtlR = derive2 { name="polyqtlR"; version="0.0.5"; sha256="12anrl8l0kjl3y5kprrjjgjcjkp4c2cpkl7dynfwmd6bx39f2gkk"; depends=[abind doParallel foreach Hmisc knitr nlme RColorBrewer Rcpp RcppArmadillo reshape2]; }; - polyreg = derive2 { name="polyreg"; version="0.6.7"; sha256="1znl46m4zfd0f4qwg3r2anz3nyn8hk607772pzxiwj5w3xc96g56"; depends=[dummies nnet partools regtools RSpectra]; }; - polysat = derive2 { name="polysat"; version="1.7-4"; sha256="08jmkik4s2171znp3w4i0v0g0k2s0di3xqwr9sf9hyd0sf8af8dp"; depends=[Rcpp]; }; + polyqtlR = derive2 { name="polyqtlR"; version="0.0.6"; sha256="0kdrq2j9lzcns29a27na3f1xga9sfa5bagf7ffkbvwxndy0xv1fi"; depends=[abind doParallel foreach Hmisc knitr nlme RColorBrewer Rcpp RcppArmadillo reshape2]; }; + polyreg = derive2 { name="polyreg"; version="0.6.9"; sha256="04dw410h29r6ji38nrlnkhb5hpmify68drnl3vmzx33xx6avd15x"; depends=[dummies nnet partools RSpectra]; }; + polysat = derive2 { name="polysat"; version="1.7-5"; sha256="1wc5q7hnhsshj8j83q85xzy84cjxmy6k2w6w0p0id05wp4j9vm94"; depends=[Rcpp]; }; polywog = derive2 { name="polywog"; version="0.4-1"; sha256="02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; - pomcheckr = derive2 { name="pomcheckr"; version="0.1.0"; sha256="1kbsz32y4fp6a579rqyfxa2g1v6j19wgs20696ywshalv7q842lj"; depends=[assertthat dplyr ggplot2 magrittr rlang stringr tidyr]; }; - pomdp = derive2 { name="pomdp"; version="0.99.0"; sha256="0plqmxzq46vgyg7365rp1m36ih5lll1kmj195iycwvsa1qaadw92"; depends=[igraph Ternary visNetwork]; }; - pomp = derive2 { name="pomp"; version="3.3"; sha256="0mil709q037ys7abfhinya0rkavilyv6ii0dh9chjss1kn05aih3"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; + pomcheckr = derive2 { name="pomcheckr"; version="0.1.1"; sha256="0fm2v388ya7v4vrb5rvilghlf49d15jlwz0isf95ldr81a55m9ij"; depends=[assertthat dplyr ggplot2 magrittr rlang stringr tidyr]; }; + pomdp = derive2 { name="pomdp"; version="0.99.3"; sha256="0mj2k3s69acgwl00jknxy9ywb73kgqxv5r7yqjlxxsnlp8rixla4"; depends=[igraph]; }; + pomp = derive2 { name="pomp"; version="3.6"; sha256="1x3xim7f663pjc6a23pblsrbqfjjmlac3x2234968cvz2vs22qbl"; depends=[coda deSolve digest magrittr mvtnorm plyr reshape2]; }; pompom = derive2 { name="pompom"; version="0.2.1"; sha256="09jy4lrb2p71yk604ndfhqfz6znlc3bq72k42f0d1i1a8g3by8h6"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.6"; sha256="1qfraam1rc2r4mn7yhhfv8lhhc4dzgq0v1y97n4h2z3mgxn5zgnd"; depends=[DBI later R6]; }; poolVIM = derive2 { name="poolVIM"; version="1.0.0"; sha256="19yw6pp5l3jmla4wjbvpjq132f645yks49pzsdv123f3qfr8f0m6"; depends=[EmpiricalBrownsMethod Hmisc ranger]; }; - poolfstat = derive2 { name="poolfstat"; version="1.2.0"; sha256="064arw174kn919qv5bvfyiva0gc21rx163yabrrnli3fkpvaf57q"; depends=[doParallel foreach Rcpp]; }; + poolfstat = derive2 { name="poolfstat"; version="2.0.0"; sha256="0bwihx9ql0sdmhm160r6vkmph88ms7zamzg7fi93mlx0h7i49phs"; depends=[ape DiagrammeR doParallel foreach Matrix nnls progress Rcpp RcppProgress Ryacas zoo]; }; pooling = derive2 { name="pooling"; version="1.1.2"; sha256="19mrzax3k35fhgjpnlrigf0nscsdl3xb7k82s5q472k4bcz7ya5b"; depends=[cubature data_table dplyr dvmisc ggplot2 ggrepel mvtnorm numDeriv]; }; - poolr = derive2 { name="poolr"; version="0.8-2"; sha256="1rkfnrz5x7f9kqpivj0gvs3fxfb9agnm8sybb7wmvvcsmshzrpkf"; depends=[Matrix]; }; + poolr = derive2 { name="poolr"; version="1.0-0"; sha256="1319q7047pm0giqqkiz1wswpvixwirz1bcn27chvzirp3n4pgxdx"; depends=[mathjaxr]; }; poorman = derive2 { name="poorman"; version="0.2.5"; sha256="05h7rjgri0b5a1jd0388p7lqvvg0y8z6g42f9bxc80jg1z730axr"; depends=[]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; popEpi = derive2 { name="popEpi"; version="0.4.8"; sha256="1gc7kyik0209pc8mvl6c69lzb3dnkif0mby4l4pq8zfdz73lmi06"; depends=[data_table Epi survival]; }; popKorn = derive2 { name="popKorn"; version="0.3-0"; sha256="1zcl6ms7ghbcjyjgfg35h37ma8nspg15rk2ik82yalqlzxjf7kxw"; depends=[boot]; }; popPCR = derive2 { name="popPCR"; version="0.1.1.1"; sha256="03ppgjmdp3rivlgqs7aq082j4rzndf9fw5aq8mzci7fvjkj7whc4"; depends=[mvtnorm]; }; + popRF = derive2 { name="popRF"; version="1.0.0"; sha256="0w3w1ffyy5b8glviib7ryjqzhmfp5aw6am3z8qpvis6l745p7vgh"; depends=[doParallel foreach gdalUtils plyr quantregForest randomForest raster]; }; popReconstruct = derive2 { name="popReconstruct"; version="1.0-6"; sha256="0nmf93dy2qf7z9mafpy99ry53aapbxlismn7drn732r8gvravapx"; depends=[coda]; }; popbio = derive2 { name="popbio"; version="2.7"; sha256="02dbb2sinn1n8a9dg8lvf35sc8hb14c90mjymz2gk64xdysf0m2j"; depends=[]; }; popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; popgenr = derive2 { name="popgenr"; version="0.2"; sha256="164dhizka0yadzihbjqkfs5p0hknw966mq0grigs7r9ppbq9kajh"; depends=[]; }; - popkin = derive2 { name="popkin"; version="1.3.8"; sha256="042yqbmnq7zqi5f4z9ys105xxbjfp3s72jmxm5y4aavh0krsan2j"; depends=[RColorBrewer Rcpp RcppEigen]; }; - poppr = derive2 { name="poppr"; version="2.9.1"; sha256="0rsnyg40gy3294j7vn9hgwjf2kyky8wgpkqklwr3110rna5mhsx6"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas polysat progressr rlang shiny vegan]; }; - popsom = derive2 { name="popsom"; version="5.1"; sha256="0ajldw618b5m3m8y5icgz7ahc6sr0x0hhakcabwzck2ryvhqxmbp"; depends=[fields ggplot2 hash]; }; + popkin = derive2 { name="popkin"; version="1.3.13"; sha256="0b00rs89jrz28p4gj35lngvaq3jynmw1gqvz4pdbsnpan6xr63v1"; depends=[ape RColorBrewer Rcpp RcppEigen]; }; + poppr = derive2 { name="poppr"; version="2.9.3"; sha256="0f8gw14vz4p6jvxa8w3fp84pm1k980mk5sfbj82qmmj236rfvyx9"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas polysat progressr rlang shiny vegan]; }; + popsom = derive2 { name="popsom"; version="5.2"; sha256="0zy50bssxpnlpvf72iiab7yfnfs2b4avd38pjilyi197dgcy2pj5"; depends=[fields ggplot2 hash]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; + populR = derive2 { name="populR"; version="0.1.1"; sha256="0hw7j08css008f0c1lz7xhv47sbxj096qw4md7x46yahpgfsa0c6"; depends=[sf]; }; populationPDXdesign = derive2 { name="populationPDXdesign"; version="1.0.3"; sha256="0p73ddv3j1s1vs4j3axnsf39n626qjv0w1qlq9p7km4s6729bhgv"; depends=[devtools ggplot2 plyr roxygen2 shiny shinycssloaders]; }; porridge = derive2 { name="porridge"; version="0.2.1"; sha256="03ay6nwq0x3vvpicb50zk2l14hfa6hi51j6cc559p6gzcwf70pj1"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; - portalr = derive2 { name="portalr"; version="0.3.7"; sha256="1n3z6xdh28n33yf7w5dbr0ilqdw6qb11msnv0mf0x2xml495048b"; depends=[clipr clisymbols crayon dplyr forecast gh httr lubridate lunar magrittr rlang tidyr tidyselect zoo]; }; + portalr = derive2 { name="portalr"; version="0.3.8"; sha256="1fb3kvpky47bxmf6q91j98pncym0siki7lh7x96l1lqyhg2si5s4"; depends=[clipr clisymbols crayon dplyr forecast gh httr lubridate lunar magrittr rlang tidyr tidyselect zoo]; }; portes = derive2 { name="portes"; version="5.0"; sha256="1iarvgz23979lipqyyvh8h0nd978p1nzbbjf020q11yqpl863502"; depends=[forecast]; }; + portfolio = derive2 { name="portfolio"; version="0.5-2"; sha256="13w8gyaphg0qspjl6d0jh0jf3wvz4agy8vzkriba0k59qhdbi52f"; depends=[lattice nlme]; }; portfolio_optimization = derive2 { name="portfolio.optimization"; version="1.0-0"; sha256="1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr"; depends=[magrittr MASS modopt_matlab xts]; }; - portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.2.3"; sha256="1xcg8yra9akl362qynfahsc7wgahlb0y73b9698nympcq8m6ailh"; depends=[digest evaluate ggplot2 pbapply PerformanceAnalytics quadprog quantmod R_utils rlang xts zoo]; }; + portfolioBacktest = derive2 { name="portfolioBacktest"; version="0.3.0"; sha256="1cdg0zrbdi5wvh6i46jqq5v98v3l44h9lz29acm4lngfw2hjri88"; depends=[digest evaluate ggplot2 pbapply PerformanceAnalytics quadprog quantmod R_utils rlang xts zoo]; }; portsort = derive2 { name="portsort"; version="0.1.0"; sha256="0swl39dn7lzwvps18bva4l64a441gkf6lbwcwrhlf93f1ardvxji"; depends=[xts zoo]; }; - postDoubleR = derive2 { name="postDoubleR"; version="1.4.12"; sha256="19z8wisi16g7a78gw16r72dkxh3x5qh888qz260ih5naq0p8vy71"; depends=[doParallel ggplot2 glmnet grf neuralnet progress]; }; - postGGIR = derive2 { name="postGGIR"; version="1.0.0"; sha256="16flv8j1k3bq3if6yy0g0mi7y55pkl223xwl56xzay3pbsjma6sc"; depends=[abind accelerometry cosinor denseFLMM dplyr GGIR ineq kableExtra minpack_lm refund survival tidyr xlsx zoo]; }; + postGGIR = derive2 { name="postGGIR"; version="2.4.0"; sha256="0a1qxaikvgam9zd19353xfbbyp08c6yxygcx720jmjvwbcjds7bi"; depends=[abind accelerometry ActCR ActFrag cosinor cosinor2 denseFLMM dplyr GGIR ineq kableExtra minpack_lm refund survival tidyr xlsx zoo]; }; postGIStools = derive2 { name="postGIStools"; version="0.2.4"; sha256="04d6iqnk7j2lgv1h5c94j6y89jk75pmv26sxa51s5iwkjq7rchym"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; postHoc = derive2 { name="postHoc"; version="0.1.3"; sha256="1l7r9md9iyav5vvjykpsnqv9whspzcmnppfpqm6qy5s5vk6b8zfd"; depends=[igraph multcomp]; }; - postcards = derive2 { name="postcards"; version="0.2.0"; sha256="13pd312bi5skxr17f8wsfx0z81saq2sskb77lq93bpln1s7ils1r"; depends=[rmarkdown rstudioapi]; }; + postcards = derive2 { name="postcards"; version="0.2.2"; sha256="0kj4l4qskvwjr22222v08fypzmg089dgs5hmqd2gi2pjfg4zwmr1"; depends=[bslib rmarkdown rstudioapi]; }; posterdown = derive2 { name="posterdown"; version="1.0"; sha256="13plrrnylw3yldm0md1gr5drccfjk9f2wwlhz6lrmb3px7w5nqs0"; depends=[pagedown rmarkdown yaml]; }; + posterior = derive2 { name="posterior"; version="1.1.0"; sha256="1lpldkkkxv94dr30q5wb5qr61qrgp9shqnskgwriigy1phnjdxpg"; depends=[abind checkmate distributional matrixStats pillar rlang tensorA tibble vctrs]; }; postinfectious = derive2 { name="postinfectious"; version="0.1.0"; sha256="1v327zxxiwc1cdksk6s39lkkgck5dxg169pp3jiqmm7xs35dcl6y"; depends=[]; }; postlightmercury = derive2 { name="postlightmercury"; version="1.2"; sha256="1345ckp50jplcdqp3a250c6mhapqh9322jzpxj5dyqmbg2nmgp9i"; depends=[crul jsonlite purrr rvest tibble xml2]; }; postlogic = derive2 { name="postlogic"; version="0.1.0.1"; sha256="11bpmfn375zpyg90dh44h86cvppzri1smmkn26jyydqjz74f4q9w"; depends=[]; }; - postpack = derive2 { name="postpack"; version="0.5.2"; sha256="1iwy7yx60aqpm5jjvjsx15kcc44mzx5qij3gwx8kb1hc4bys4wka"; depends=[abind coda matrixcalc mcmcse stringr]; }; + postpack = derive2 { name="postpack"; version="0.5.3"; sha256="0sij749ayw0f8pjz2b6x5df4wsz333q5bz7x2rnxaqwmjiiwm7rp"; depends=[abind coda mcmcse stringr]; }; potential = derive2 { name="potential"; version="0.1.0"; sha256="0j7l60j8x59l28223f3m3cdifd9hvcpsmfz6aharcygmpha77i8p"; depends=[doParallel foreach isoband sf]; }; + potools = derive2 { name="potools"; version="0.2.2"; sha256="1vn99kh9cpicljs3caz3pw12azm19sx8q9nybk0xfffrldmz6r2q"; depends=[data_table]; }; potts = derive2 { name="potts"; version="0.5-9"; sha256="1kiha209w9nyyx4qqsdp51q2y7ny67nzqkdanlrh2106lcab3hj8"; depends=[]; }; pould = derive2 { name="pould"; version="1.0.1"; sha256="0hr6j08whbc1jydz20rg0cphfiwx4pyrav49w9qs9dkcaqrpid7l"; depends=[BIGDAWG gap ggplot2 haplo_stats reshape2]; }; povcalnetR = derive2 { name="povcalnetR"; version="0.1.1"; sha256="0ah6n3wpjiwyh0mancqqpvyknx25dxr13p0nqnrfzmhfwyaywar0"; depends=[dplyr httr js jsonlite memoise naniar purrr readr stringr tibble tidyr]; }; - powdR = derive2 { name="powdR"; version="1.2.5"; sha256="0gf83w34wrkdn03wa5pwsahycykcxfzk2bnmrbbkwafpnr99a9aj"; depends=[baseline DT ggplot2 ggpubr nnls plotly plyr reshape shiny shinyWidgets tidyr]; }; + powdR = derive2 { name="powdR"; version="1.3.0"; sha256="1bkx43xd46gzgiphknqyz2nyvviia0xkn4h8z4k2dwcfq92iwsbw"; depends=[baseline DT factoextra FactoMineR ggplot2 ggpubr nnls plotly plyr reshape rxylib shiny shinyWidgets tidyr]; }; powdist = derive2 { name="powdist"; version="0.1.4"; sha256="1my88ag5q9hwkn2wy79jl9008gpvg0bsrnyc81gkdfi7pjh2mp1z"; depends=[gamlss_dist normalp rmutil]; }; poweRlaw = derive2 { name="poweRlaw"; version="0.70.6"; sha256="14d1myxllvm1grnfiszzzxaiqpb2jpmsi19wq70r8r2wki293h7g"; depends=[pracma]; }; powerAnalysis = derive2 { name="powerAnalysis"; version="0.2.1"; sha256="0cma4v402n6wcb2gy9g1ymydzh8vimy9nfrrn8xhnjsf7x6jh215"; depends=[]; }; powerCompRisk = derive2 { name="powerCompRisk"; version="1.0.1"; sha256="11xprjn9hzi8gxrsi7wivwgchg9h2apgxa63fp466ngjfy5ybxf4"; depends=[mvtnorm]; }; - powerEQTL = derive2 { name="powerEQTL"; version="0.2.9"; sha256="1549z461q5img2ycsbdriirbyxy7bd2yshvxnn90svx771g4ghzp"; depends=[GLMMadaptive glmmTMB nlme]; }; + powerEQTL = derive2 { name="powerEQTL"; version="0.3.4"; sha256="124mwkjf5m19znn7zdnncdc3klgqyid08kvihk0gws2y9bw0m1zs"; depends=[GLMMadaptive nlme]; }; powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; }; powerLATE = derive2 { name="powerLATE"; version="0.1.1"; sha256="1dmvvh7ynvr8krl5p1qbg8ib1s595vqci2r80zmwsm28jhv8ka4w"; depends=[]; }; powerMediation = derive2 { name="powerMediation"; version="0.3.4"; sha256="08zszskhd21pbjamch5q7v7vx2p78c1d53zrp31hmpxk1ymx2xf3"; depends=[]; }; powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.3"; sha256="1p1fw4jq4rxc273hmycxf4bkqm6zmfw0jdy2s65jy10q37r53ial"; depends=[pracma survival]; }; powerbydesign = derive2 { name="powerbydesign"; version="1.0.5"; sha256="006m127rc49bshgljd5d3ii6sfx24ndn2690ixj0vnqm2dp3zjnw"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; - powerlmm = derive2 { name="powerlmm"; version="0.4.0"; sha256="0dpfvbp54lhz7ibzihqqrbl45s6dqxn6qyvv39mk2166hjcgi1h2"; depends=[lme4 MASS Matrix scales]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; ppcSpatial = derive2 { name="ppcSpatial"; version="0.2.0"; sha256="1gi57zngc42wcrihg29nn7qa3gaq105ckp76qmczkldshlpd7x4r"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; @@ -13460,14 +14013,15 @@ in with self; { ppclust = derive2 { name="ppclust"; version="1.1.0"; sha256="0vmgjjy7gin88qailzfcwapndl5s8fm6i8kw9gv6aykg9mr75xlv"; depends=[inaparc MASS]; }; ppcong = derive2 { name="ppcong"; version="0.0.2"; sha256="0k34ibzyxak2a8xhsf4jdp50w8k8dsd1nn3gcdcakx8s2rgymq7v"; depends=[curl jsonlite tfse tibble]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; - ppdiag = derive2 { name="ppdiag"; version="0.1.0"; sha256="15wva4w3l137ipsj0hx9f1qa206l58ml1qf521aj11r73qy75j2k"; depends=[]; }; + ppdiag = derive2 { name="ppdiag"; version="0.1.1"; sha256="1p2nbkv2jsqdwwipyp3mz9cpy9lkia2cmigbcpjsa2d2i655hvs5"; depends=[]; }; ppgam = derive2 { name="ppgam"; version="1.0.1"; sha256="0w2jci5k0y8m7rapj8w6xq849y59m7y4fp9n3f5l6q954mbc6bv0"; depends=[evgam MASS mgcv]; }; ppgmmga = derive2 { name="ppgmmga"; version="1.2"; sha256="1dq0p3xna5r1kiyhiziz3wc78dfqh362qhna5hmkjzhljawr9jg0"; depends=[cli crayon GA ggplot2 ggthemes mclust Rcpp RcppArmadillo]; }; ppitables = derive2 { name="ppitables"; version="0.5.4"; sha256="0hssk8yf8f15x7m03x71v9yrshrzgkww8xfacbbsw5mpqcghc9zl"; depends=[tibble tidyr]; }; ppmHR = derive2 { name="ppmHR"; version="1.0"; sha256="1fc9rrk3ir3dq5d518ih67dvknhz1ln6668wy2mzsdndaysgm12g"; depends=[nleqslv]; }; - ppmSuite = derive2 { name="ppmSuite"; version="0.1.3"; sha256="0wi8cmjvz5vizvqzcrkagh2y2pjz372jc0xwzyi4p1d63cnwdhkq"; depends=[]; }; + ppmSuite = derive2 { name="ppmSuite"; version="0.1.8"; sha256="05qh7bd6d8dp1m4cpd01h5aw3iq6kyly70ng0hbfg53j6kwvlalg"; depends=[]; }; pps = derive2 { name="pps"; version="1.0"; sha256="0k06rkzdx07qcndqym44q6xyawdd253i3kbyqlmlavadsizp657g"; depends=[]; }; ppsbm = derive2 { name="ppsbm"; version="0.2.2"; sha256="0y4whxv14jqx7mqxj7n427vpbxb5rkwj8xvx0mj4knnwy9v437z4"; depends=[clue gtools Rfast]; }; + ppseq = derive2 { name="ppseq"; version="0.1.1"; sha256="0r1si156d806l35241fy85cr98j2mmsmc63nwilhr2px9272r75b"; depends=[dplyr furrr future ggplot2 patchwork plotly purrr tibble tidyr]; }; ppsr = derive2 { name="ppsr"; version="0.0.2"; sha256="1dk62b08sxp87kll8wjfby3iq9l3akiprarh8agjdv6s43c9h2sg"; depends=[ggplot2 gridExtra parsnip rpart withr]; }; pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; @@ -13478,24 +14032,26 @@ in with self; { prais = derive2 { name="prais"; version="1.1.1"; sha256="027qsa1nc680bcs61dlyz0wwap5pgxdfzasg9ny37a55hnikxid5"; depends=[lmtest sandwich]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; - praznik = derive2 { name="praznik"; version="8.0.0"; sha256="037lcic87b6136b5fi9g557idd3rvglw995b94xadcdaqcpy906z"; depends=[]; }; + praznik = derive2 { name="praznik"; version="9.0.0"; sha256="0k8dk2jbinr3n8hgfsxkyv8739y9y3v4kcxwrq9dxzpiasx3p5r6"; depends=[]; }; prcbench = derive2 { name="prcbench"; version="1.0.1"; sha256="1n7f9qn0vz86ir4byvni4fi5x2xa8sdzpb54hwc0b34xy2wjm204"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; prcr = derive2 { name="prcr"; version="0.2.1"; sha256="0k5vl14akqf8qvak6h7a19qxn4wzpyxq7lyvdhxfh8l4gs4ca2l6"; depends=[class dplyr forcats ggplot2 irr lpSolve magrittr purrr tibble tidyr]; }; - pre = derive2 { name="pre"; version="1.0.0"; sha256="07iai8vkxmx0dhnqy28gwh1hwc2iqg7bb0mwm8c68qpp8ffxwplm"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; - precautionary = derive2 { name="precautionary"; version="0.2-1"; sha256="1vk2dwljh2fnhidb008dp4ma8mad49hrkq1chy9z8nsd40sbbpcl"; depends=[data_table dplyr escalation kableExtra knitr magrittr rlang stringr]; }; + pre = derive2 { name="pre"; version="1.0.1"; sha256="1wvwdwn65n98bzrsghqbxhf1hv2mcpizjxvzx00mplm4xjbzkk7g"; depends=[earth Formula glmnet Matrix MatrixModels partykit rpart stringr survival]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; + precisePlacement = derive2 { name="precisePlacement"; version="0.1.0"; sha256="1w48k4kv3xm8br7dgbpx2rcdxjh0g0aw8xa1snqy0ig8a992804b"; depends=[]; }; precisely = derive2 { name="precisely"; version="0.1.1"; sha256="0wakzr3j7v4kpi4qf3f9m4n97nr3vajwjm6kkwg1xinli8yhsi81"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinycssloaders shinythemes tidyr]; }; precommit = derive2 { name="precommit"; version="0.1.3"; sha256="1rmzz99wvjk0wv5csi4xmf2rc23dh3y3h3jwrd13mzs2ss5kjsq3"; depends=[docopt fs here magrittr purrr R_cache rlang rprojroot rstudioapi usethis withr yaml]; }; - precrec = derive2 { name="precrec"; version="0.12.5"; sha256="1nz5i99ivcd8ncc41nm7sd48ga8bih39hd292d80n8dx2dpwn7kw"; depends=[assertthat data_table ggplot2 gridExtra Rcpp withr]; }; + precrec = derive2 { name="precrec"; version="0.12.7"; sha256="0vwzaqnh9ymrm52dd79bihwqprnygz0d71ay8fv51hdw0zg6saya"; depends=[assertthat data_table ggplot2 gridExtra Rcpp withr]; }; predReliability = derive2 { name="predReliability"; version="0.1.0"; sha256="18s9ijg3fcg6qb0y6pnwngmv69ajm93z0xjdzkq3fp5bxk1qylyb"; depends=[cluster rpart]; }; - predhy = derive2 { name="predhy"; version="0.2.0"; sha256="0l3x9ivrlb43x3qbrpw5gjyfc3n3b4bbsav1r4hl96znypwi7j9f"; depends=[]; }; + predfairness = derive2 { name="predfairness"; version="0.1.0"; sha256="0b9d6a2rk6vw4y5hnh721gmirnm419yynbfg7arjb96558l282kd"; depends=[]; }; + predhy = derive2 { name="predhy"; version="1.2.0"; sha256="0iwlv9j0xpsl2xkvy7yb1irjg67d8xq13bzgjj8i4rqqhv12ap57"; depends=[BGLR doParallel foreach glmnet pls randomForest xgboost]; }; predict3d = derive2 { name="predict3d"; version="0.1.3.3"; sha256="1kb3jacpgzln1ddnkfzhvfpzzf9wig60lppca6iy0fvq5cm8ddr4"; depends=[dplyr ggiraphExtra ggplot2 magrittr modelr moonBook plyr prediction purrr reshape2 rgl rlang stringr TH_data tidyr]; }; prediction = derive2 { name="prediction"; version="0.3.14"; sha256="0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; - predictmeans = derive2 { name="predictmeans"; version="1.0.4"; sha256="11282jzmlkbawsh1k4582a7yh4xxfh01sn6zp5nbdsr9c9p6vqfz"; depends=[ggplot2 lme4 Matrix nlme numDeriv pbkrtest plyr]; }; - predictoR = derive2 { name="predictoR"; version="1.1.9"; sha256="0vyhh6gcrmcwrda5b178sf36igixcsrllkfy94yp998h9d0sn5k2"; depends=[adabag colourpicker DT e1071 flexdashboard glmnet kknn neuralnet plyr randomForest rattle ROCR rpart shiny shinyAce shinydashboardPlus shinyjs shinyWidgets tidyverse xgboost]; }; + predictmeans = derive2 { name="predictmeans"; version="1.0.6"; sha256="1mg37vd5nlfvv3mx6hrdmxj0aavm9wy1j70117hp4sasvlvsccdi"; depends=[ggplot2 lme4 lmeInfo Matrix nlme pbkrtest plyr]; }; + predictoR = derive2 { name="predictoR"; version="2.0.4"; sha256="1yncrjpalfq4k1hfsp0zqhnpdahvphmnm97dwvbzs8vvxngkr76d"; depends=[colourpicker config DT echarts4r glmnet golem htmltools rlang rpart rpart_plot shiny shinyAce shinycustomloader shinydashboard shinydashboardPlus shinyjs traineR xgboost xtable]; }; predictrace = derive2 { name="predictrace"; version="2.0.0"; sha256="1bk1l9gai4hyck72h81znsm1dzqwm5wddbz0bm9g5igs6zkar2ka"; depends=[dplyr]; }; + predint = derive2 { name="predint"; version="1.0.0"; sha256="043nsjvn88dhwvp5snbhmh64m8iy22ws4l474mbkm3rb488i9is9"; depends=[dplyr lme4]; }; predkmeans = derive2 { name="predkmeans"; version="0.1.1"; sha256="0352c50zlyzn8fczrkinayllj9jp978njjl7dazzkzypx0p20va5"; depends=[e1071 maxLik mgcv Rcpp RcppArmadillo]; }; predmixcor = derive2 { name="predmixcor"; version="1.1-1"; sha256="0v99as0dzn0lqnbbzycq9j885rgsa1cy4qgbya37bbjd01b3pykd"; depends=[]; }; predtoolsTS = derive2 { name="predtoolsTS"; version="0.1.1"; sha256="0f9fapw9yjdzj6pwcskbyfwjsvg09ahn20vrv4bgi0dx8am291rl"; depends=[caret forecast Metrics tseries TSPred]; }; @@ -13514,12 +14070,13 @@ in with self; { presize = derive2 { name="presize"; version="0.2.3"; sha256="0gwavbi9fbwh454n5yg0rwqy13a8zjhs2yj7jhlmjn1bjjmxp8j4"; depends=[kappaSize shiny]; }; presmTP = derive2 { name="presmTP"; version="1.1.0"; sha256="134p58zzk8i0whscvl5qdfn4niksypyxavq1m15cvw4zzk4dk6fw"; depends=[mgcv survPresmooth]; }; presser = derive2 { name="presser"; version="1.1.0"; sha256="1slkdfh0wq242adp6a60612sjz117bii3pbahn00bfmnpa9g1wya"; depends=[]; }; - prettifyAddins = derive2 { name="prettifyAddins"; version="2.0.3"; sha256="0kyvc1z5dykkrb4cnvlscjnm6xzzzsc2lg1bs012zw5x1qg5gp01"; depends=[httr rstudioapi shiny webdriver xml2 XRJulia]; }; + prettifyAddins = derive2 { name="prettifyAddins"; version="2.2.0"; sha256="1hwcvfzknr6fnqbgbp5mq8g3cayrl4df8ncg0rvshaxkvmapcm88"; depends=[httr rstudioapi shiny webdriver xml2 XRJulia]; }; prettyB = derive2 { name="prettyB"; version="0.2.2"; sha256="1wszcmn5jnk02iyvjld42291m1irfp9m0b3lcdyyp41iq3icm67g"; depends=[]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.6"; sha256="0yjpwxdy9mkj2k33zvd5klyv4ava46i19yls87n0bvf79y90ikpy"; depends=[]; }; prettyR = derive2 { name="prettyR"; version="2.2-3"; sha256="1rs90cmr5dyry724php90mp41qwzzk1z3gxfwcj1k157qawacyhr"; depends=[]; }; prettycode = derive2 { name="prettycode"; version="1.1.0"; sha256="1ifh9h73szc23p1ii77z0r68n1gghndqqdm07wd7gxsg5pppp1sg"; depends=[crayon]; }; prettydoc = derive2 { name="prettydoc"; version="0.4.1"; sha256="0aa89jnqhz0l69inrgm1f1riq5bm3ksb8wjl8d4x2f320adsd50h"; depends=[rmarkdown]; }; + prettyglm = derive2 { name="prettyglm"; version="0.1.0"; sha256="1qxfiynry2fhmdrqkn7hf2llx18gdi8an3crkx0s116yp3dlv5xl"; depends=[broom car dplyr forcats kableExtra knitr plotly stringr tibble tidycat tidyr tidyselect vip]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; prettyunits = derive2 { name="prettyunits"; version="1.1.1"; sha256="1ibmzgknw5896q2i6r59jz2izblxwgb29ivvjzx50pkd1jl9l6cs"; depends=[]; }; prevR = derive2 { name="prevR"; version="3.4.1"; sha256="02qfyc5j7rgvwl7a5pr1l41jmgjxxsrc674xfm08hcydwda5clq1"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; @@ -13527,10 +14084,11 @@ in with self; { prevederer = derive2 { name="prevederer"; version="0.0.1"; sha256="0vkx9nrlgp36xbl95lrb5sb5yivxlcw4yvbs8hgbm31kh0vbz32f"; depends=[httr]; }; prevtoinc = derive2 { name="prevtoinc"; version="0.12.0"; sha256="0ypdxcx9gh87a7ih3cw3yai47rzv41qwh4kpk6007ai8jkjv4n9w"; depends=[dplyr purrr rlang tibble]; }; prewas = derive2 { name="prewas"; version="1.1.1"; sha256="16dpwpks0sqfq7pdhbpipb8hnm2viic2dnz1g7v86ar51z8db4xk"; depends=[ape future future_apply phangorn vcfR]; }; - priceR = derive2 { name="priceR"; version="0.1.5"; sha256="0cky3l0ycyq42dmmipvd8dbnfcblnhnywbb8dvpma96jq76b4czv"; depends=[curl dplyr gsubfn jsonlite lubridate purrr stringi stringr]; }; + priceR = derive2 { name="priceR"; version="0.1.6"; sha256="1c2yxjrd9v5i76hc5dn0hc6k2shy9cs32mvhr579w7n990ksjw23"; depends=[curl dplyr gsubfn jsonlite lubridate purrr stringi stringr]; }; pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="1.2.1"; sha256="1y7qm0kxys4vvlmddsfc0wxxrl5kj1qw8khqkij5310874qj1lrn"; depends=[ggplot2 rlang survey]; }; + prider = derive2 { name="prider"; version="1.0.2"; sha256="0a7n4b2a0p91q8llgn14czfxvi588v62x5azl7nndvjdk6g4cmmy"; depends=[blaster dplyr gplots magrittr purrr Rcpp stringr tibble tidyr]; }; prim = derive2 { name="prim"; version="1.0.20"; sha256="0z07ddpz6r3sbi5141n9a0snzcc26rdlxiivfnacs8zavs1sk73x"; depends=[plot3D scales]; }; - primePCA = derive2 { name="primePCA"; version="1.0"; sha256="0kpyqv3l58xcyd98a7c7ggsna30j6k62aliidlyxgv2ya0g0dshv"; depends=[MASS Matrix softImpute]; }; + primePCA = derive2 { name="primePCA"; version="1.2"; sha256="0w3w50x17q7gwji19m6dx5vq46h8p62alf3axd10mycl609jlbcb"; depends=[MASS Matrix softImpute]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; primer = derive2 { name="primer"; version="1.2.0"; sha256="0qs4bzh80a6058v3s25z0w64wqpscgcciqbyqdifixl51z2qadf4"; depends=[deSolve ggplot2 tidyr]; }; primerTree = derive2 { name="primerTree"; version="1.0.5"; sha256="1ymj4y0a8pd0r15bsqilm03b2n0a633ibzzp2h0qkv880xqbikz4"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr RCurl reshape2 scales stringr XML]; }; @@ -13554,10 +14112,9 @@ in with self; { probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; }; probably = derive2 { name="probably"; version="0.0.6"; sha256="0g7d6mw4nj6lynbpaa4qbnyzpwgw1bwl44b7zxm6x1wal6p679ga"; depends=[dplyr generics rlang tidyselect vctrs yardstick]; }; probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; - probhat = derive2 { name="probhat"; version="0.4.0"; sha256="02krckplqd1mb70wnxdpw1bjss0w7477cm6zjwarh7qrj8g39bbx"; depends=[barsurf kubik]; }; probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; - proceduralnames = derive2 { name="proceduralnames"; version="0.1.1"; sha256="04ashlba21g1gbvpzw4fda6p618bk1gcnffx9kb4hchwdf8d18h8"; depends=[]; }; + proceduralnames = derive2 { name="proceduralnames"; version="0.1.2"; sha256="0x8axblk5zmzwrjb0pwb7jj93aapgv9v51yk2rlkzc3hs7jvxr2q"; depends=[]; }; processR = derive2 { name="processR"; version="0.2.6"; sha256="1k6ili4vx2s36l9xdvm7livnjr4r1pcdg5f92ivdivarcb3h907w"; depends=[diagram dplyr flextable ggplot2 ggrepel interactions lavaan officer predict3d psych purrr rlang rmarkdown rrtable semTools stringr tidyr tidyselect ztable]; }; processanimateR = derive2 { name="processanimateR"; version="1.0.3"; sha256="1ywn2hv2wg35i6ww1ckr6gcb709sf1c836ml542g8iiggwk3cvz5"; depends=[bupaR DiagrammeR dplyr htmltools htmlwidgets magrittr processmapR rlang stringr tidyr]; }; processcheckR = derive2 { name="processcheckR"; version="0.1.3"; sha256="14d8148zcnyh9ycqy5nyszrafq3mgck87w80kx2apg52gkdaq18g"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; @@ -13566,24 +14123,25 @@ in with self; { processx = derive2 { name="processx"; version="3.5.2"; sha256="0azw8sx6nv6pp8m8jrwq01b9na2swrnznn7dwrhn07268w82svzd"; depends=[ps R6]; }; procmaps = derive2 { name="procmaps"; version="0.0.3"; sha256="14vbrsj37hjraskqpagr56r3rax20zszs58yag2gwiib6da1wkpj"; depends=[]; }; prodest = derive2 { name="prodest"; version="1.0.1"; sha256="16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509"; depends=[AER DEoptim dplyr Matrix Rsolnp]; }; - prodigenr = derive2 { name="prodigenr"; version="0.5.0"; sha256="1h15fwd4rclja0q80y119sah1qbyjlbaqxg360ywq9ig151lxsjq"; depends=[fs git2r rmarkdown rprojroot usethis withr]; }; + prodigenr = derive2 { name="prodigenr"; version="0.6.1"; sha256="1skjznwi6yipdcfbby1jzl8ng42hbn5zb9z31yxrp0ljhx1g0y70"; depends=[cli fs rlang rmarkdown rprojroot whisker withr]; }; prodlim = derive2 { name="prodlim"; version="2019.11.13"; sha256="03wvh3kirp1prac5nky6a5whs97rvaf4hc27x0fnh51sa17r42b8"; depends=[KernSmooth lava Rcpp survival]; }; productivity = derive2 { name="productivity"; version="1.1.0"; sha256="1g8b4vlyqq3xyzd4dki01glhc3g9j3ywgwpxylkmzp0ivqic53yc"; depends=[doParallel foreach iterators lpSolveAPI]; }; productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profExtrema = derive2 { name="profExtrema"; version="0.2.1"; sha256="0gdhamnngh1yh3nb7l656qhdr61s0zn6h1hagh22k2fn11z3xhsl"; depends=[DiceKriging KrigInv lhs MASS microbenchmark pGPx quantreg rcdd RColorBrewer]; }; - proffer = derive2 { name="proffer"; version="0.1.1"; sha256="0bc6sq113v7ac7sj7n7xw7wlmhh26krpmj5hraci04jzh998wkvh"; depends=[cli pingr processx profile RProtoBuf withr]; }; + proffer = derive2 { name="proffer"; version="0.1.5"; sha256="0xf0qhxvkvmjhc2809qg5ylvcj8kc5yjzxdspxl9qg039z89346d"; depends=[cli pingr processx profile RProtoBuf withr]; }; profile = derive2 { name="profile"; version="1.0.2"; sha256="0yaxc846bvc29qx0q8jag7llsgiwhzx59nhnrad1v5sqyp3slk5r"; depends=[rlang tibble withr]; }; profileModel = derive2 { name="profileModel"; version="0.6.1"; sha256="01m5nb8cmq0aq555pxk2a99182si65hhmn68yn9nal2j3zl2bp4i"; depends=[]; }; profileR = derive2 { name="profileR"; version="0.3-5"; sha256="0fgc7585a7194c67irafjnx8g2j6mn3qhcfn76c6dh28clp20qp9"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; profmem = derive2 { name="profmem"; version="0.6.0"; sha256="0gg6ja0ifwn9jj42rw1gnyil55sl9r2y5rjb6yjcvqwd5arajp3l"; depends=[]; }; + profoc = derive2 { name="profoc"; version="0.8.4"; sha256="1i06gv1gp64905bhmsar57a6p4cfp3sznynbavxk0hfc4xx933r4"; depends=[Matrix Rcpp RcppArmadillo RcppProgress splines2]; }; profr = derive2 { name="profr"; version="0.3.3"; sha256="00bv1q0qn46nz4zjfs0l2yfh3hk71rajlp2rrlwg442z11k79ap9"; depends=[plyr stringr]; }; proftools = derive2 { name="proftools"; version="0.99-3"; sha256="095pxyyv6k818qwcjygbz1h24k0xkqi1agns8cqh2m5g64aynd70"; depends=[]; }; profvis = derive2 { name="profvis"; version="0.3.7"; sha256="1f86m426pcf90l29hf4hkirzf8f38dihk52bxbdq2gvrrdili5s3"; depends=[htmlwidgets stringr]; }; progenyClust = derive2 { name="progenyClust"; version="1.2"; sha256="0azp5pvk316s8xbawcqwqfd80fxb4xn8hc6aq87xwksc6fhwp94l"; depends=[Hmisc]; }; prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.2.2"; sha256="0dgzb362641aqm8xd88iqa8jmpdm43xs0aba0d5kk6fvapnxi95l"; depends=[crayon hms prettyunits R6]; }; - progressr = derive2 { name="progressr"; version="0.7.0"; sha256="0drbb5zrk5yiypbkwrz3yqiwaik77d6w7qgqzv684ycdwc3nar4h"; depends=[digest]; }; + progressr = derive2 { name="progressr"; version="0.9.0"; sha256="03sk5cv8cywahlszjkd8pfqmhbj6cv0j54d3lassa7h44f20zryg"; depends=[digest]; }; proj4 = derive2 { name="proj4"; version="1.0-10.1"; sha256="06fsw7j9c50s0md06niyvj6hvsk3fad0y1r1hsqk0jdsbjz7r1b6"; depends=[]; }; projections = derive2 { name="projections"; version="0.5.4"; sha256="1c7fm2f3fx0905afw3nrbv6vv0a0awpml1rl2kaxnijjgqcxa6dg"; depends=[ggplot2 incidence]; }; projects = derive2 { name="projects"; version="2.1.3"; sha256="0ljrhswr5sfq051x0aicl9yvwakw9d9drgrmcz9d8qhgw1if0mky"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble vctrs zip]; }; @@ -13603,79 +14161,88 @@ in with self; { proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; propr = derive2 { name="propr"; version="4.2.6"; sha256="16ghgzpwz6q9zlaa0pc8wqv0wpz81c75n7zwjyr1lv9y19qwlkfg"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.2.1"; sha256="0yg2ip33548mily51hgpiiasp67pcc3x1ksmbaxcg1mpp48algyz"; depends=[foreach iterators lifecycle mathjaxr Rcpp RcppArmadillo]; }; - protViz = derive2 { name="protViz"; version="0.6.8"; sha256="0rn8fjg7791a4j2k1kk1jwx40xz20bfaavvflmhyzpl398vmmy3a"; depends=[Rcpp]; }; + protViz = derive2 { name="protViz"; version="0.7.0"; sha256="0l1pmfr9kmc90rl5s9b0141451rxrjmiiasp3lsvl2x3ps0smqaj"; depends=[Rcpp]; }; protag = derive2 { name="protag"; version="1.0.0"; sha256="1iaw2w1d7hdvlg5vplpqc49wq08dgmm0ifvp2v0ggqb8invvdnw8"; depends=[dplyr ggplot2 RColorBrewer]; }; + protein8k = derive2 { name="protein8k"; version="0.0.1"; sha256="11qj4sadhcsp1kk5kjmvzj2jnd3srsm5mp0q9h9khp1ps6dk35yw"; depends=[dplyr ggplot2 gridExtra lattice magick pryr rjson rlang shiny]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; proteomics = derive2 { name="proteomics"; version="0.2"; sha256="01cd4sb79gcx8gbzl624scvjbwhgcsca1wdvvfkhsv7jfwdd2ry2"; depends=[foreach ggplot2 plyr reshape2]; }; + proteus = derive2 { name="proteus"; version="1.0.0"; sha256="0kasp1mmhzh8rkvxxcq44wcn9fg6q85wr3albxwi0cav0kkxhkzh"; depends=[abind actuar bizdays dplyr fANCOVA ggplot2 imputeTS lubridate modeest moments narray purrr readr scales stringr tictoc torch VGAM]; }; proto = derive2 { name="proto"; version="1.0.0"; sha256="1l843p8vckjckdhgv37ngv47fga5jzy0n00pmipvp05nnaixk54j"; depends=[]; }; protoclass = derive2 { name="protoclass"; version="1.0"; sha256="17d2m6r1shgb47v8mwdg1a7f5h29m5l7f5m0nsmv0xc90s9cpvk8"; depends=[class]; }; protoclust = derive2 { name="protoclust"; version="1.6.3"; sha256="1jwfzlxyi2mx3mry2xr2glc6fm6a9jc8fhsdzjbb4zgx7vx2vpqv"; depends=[]; }; - protolite = derive2 { name="protolite"; version="2.1"; sha256="0mwpdlpxsxbj4s2s30d0w1h4dsg0j1jzzldh8kvxii9lpfkiv2gz"; depends=[jsonlite Rcpp]; }; + protolite = derive2 { name="protolite"; version="2.1.1"; sha256="0g1r3lzmvx1w44qzqzdvxfn21zmz11srlp6cr76kd7pd5wzjv82p"; depends=[jsonlite Rcpp]; }; proton = derive2 { name="proton"; version="1.0"; sha256="1mgaw54is8l6ac1rf8s70rj7kv9xgsfdrlvjz01ggfwg7c6pyr3s"; depends=[digest]; }; prototest = derive2 { name="prototest"; version="1.2"; sha256="07g58hq2qdpczqhjsv6dq1bya9rs958r103n91icw5yc19bvyhi2"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; protr = derive2 { name="protr"; version="1.6-2"; sha256="13vgiqkqqq1w2yj5f6i6scag0mr189zmisyvi6fgaw8g9dgxpxan"; depends=[]; }; - protti = derive2 { name="protti"; version="0.1.0"; sha256="1qw5wsg69k3m12d35bng9h80vzqwfh87n5v0rxg8dw8lw303gi38"; depends=[data_table dplyr forcats ggplot2 ggrepel janitor magrittr plotly progress purrr rlang stringr tibble tidyr]; }; + protti = derive2 { name="protti"; version="0.2.0"; sha256="0nrn8lsxhqpq1xp1njly9px9awg33g732sjh8xgw4vfkn0v5qgcm"; depends=[curl data_table dplyr forcats ggplot2 ggrepel janitor lifecycle magrittr plotly progress purrr readr rlang stringr tibble tidyr]; }; proustr = derive2 { name="proustr"; version="0.4.0"; sha256="1qp4v4vb1qh137qn7zi1d2g999z17kq6kpyxy9355mj8c49iy8pn"; depends=[attempt rlang SnowballC stringr tidyr tokenizers]; }; provDebugR = derive2 { name="provDebugR"; version="1.0.1"; sha256="0ynz5m1gkaj1wks5l71r3iz7npf3mz0r04jsa8zwg670zsv2x7rf"; depends=[httr jsonlite provGraphR provParseR textutils]; }; - provExplainR = derive2 { name="provExplainR"; version="1.0"; sha256="0vzab23q2847q1qljgjxfdg3q7s8z1szfbmgg7sksc10zk4450d3"; depends=[diffobj digest dplyr provParseR stringr]; }; + provExplainR = derive2 { name="provExplainR"; version="1.1"; sha256="1jgxmpzgigpbdqh3r8gy6h0akv11ssl494h2jscdyb8zpjmc92fg"; depends=[diffobj digest dplyr provParseR stringr]; }; provGraphR = derive2 { name="provGraphR"; version="1.0"; sha256="0s2hj8j3rjig37wpjlr2fgw2klwr6a26mxrnk1lq5d9262x6v3aa"; depends=[igraph Matrix provParseR]; }; provParseR = derive2 { name="provParseR"; version="0.3"; sha256="0cmyb6da9l0822xrzni19r1ha6zzya385hk2ym9rmchvb34lax53"; depends=[jsonlite]; }; provSummarizeR = derive2 { name="provSummarizeR"; version="1.4.2"; sha256="1pfnrvgqzpdhrsyh0y75idwj13zgcdj7ql6frpjmc0f5cggv7q1q"; depends=[dplyr provParseR]; }; provTraceR = derive2 { name="provTraceR"; version="1.0"; sha256="19iillyh5zw64mmr6ik4ci1n2p651xqzxa4iq5bwa70imbzyy5ip"; depends=[provParseR]; }; provViz = derive2 { name="provViz"; version="1.0.7"; sha256="0bjq8mywgm2jr0m0458wk6n5al7jr1psvh4g31z4qzlrrkfqgzzg"; depends=[]; }; provenance = derive2 { name="provenance"; version="3.3"; sha256="0kdpv1gjvgv9nxfsarm1z042xas9d4n2smhrqccs450a2mhb5fxr"; depends=[IsoplotR MASS]; }; - proxy = derive2 { name="proxy"; version="0.4-25"; sha256="1m893djrv6ckadmlx9n5bxfp0ycdh2w63sy6yxfyj1migvc7072f"; depends=[]; }; - proxyC = derive2 { name="proxyC"; version="0.1.5"; sha256="159bc42x4shm6n3rh9fc8ziv3ivq0ipmpbasrh279hhn1prc8gg6"; depends=[Matrix Rcpp RcppArmadillo RcppParallel]; }; + proxy = derive2 { name="proxy"; version="0.4-26"; sha256="0k8sr24mjfvxp12sf1j9228ah3ngy15nqmm0jw14x5s32f1assv7"; depends=[]; }; + proxyC = derive2 { name="proxyC"; version="0.2.1"; sha256="1j8zsxdnpi8bywd7hhm47icgl1jhfyd8myj78bqgk7warai6m3iq"; depends=[Matrix Rcpp RcppArmadillo RcppParallel]; }; prozor = derive2 { name="prozor"; version="0.2.11"; sha256="1a2k69fvgi6vxgczk81kh8r2jxc6nirc51w6ac239rqjzb1zyhjm"; depends=[AhoCorasickTrie doParallel dplyr foreach Matrix plyr readr seqinr stringr]; }; - prrd = derive2 { name="prrd"; version="0.0.4"; sha256="1hip4qcy9gqw5s0yv2b07f93xc8gqymqvzfnkcr2jd46l6045818"; depends=[config crayon data_table DBI liteq RSQLite]; }; - prt = derive2 { name="prt"; version="0.1.3"; sha256="1kzcxdfi1p9bjdydv5gpvrd1wgcjmncksdfqnmqhbfnw3dwaas42"; depends=[assertthat backports cli crayon data_table fansi fst knitr pillar rlang tibble vctrs]; }; - pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; + prrd = derive2 { name="prrd"; version="0.0.5"; sha256="0ig3k1l2md6hzb5asv277ylg0k9a1rkcrbs8d8h4f07pxykhmivf"; depends=[config crayon data_table DBI liteq RSQLite]; }; + prt = derive2 { name="prt"; version="0.1.4"; sha256="0adbznxacdfqd9hvp5x45vckh6vxlz2fvhqdqikmfy99k9gzcd4c"; depends=[assertthat backports cli crayon data_table fansi fst pillar rlang tibble vctrs]; }; + pryr = derive2 { name="pryr"; version="0.1.5"; sha256="02vp1y7zhv22id43j5c0gdcgn9171dyypqp8rqrlc3w5a7n565kv"; depends=[codetools lobstr Rcpp stringr]; }; ps = derive2 { name="ps"; version="1.6.0"; sha256="0cdzjqgap108whhsilxllg12m2d05pgksryhrz5bq608bvf7vbc9"; depends=[]; }; psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; psSubpathway = derive2 { name="psSubpathway"; version="0.1.1"; sha256="1jzymhh1dy5w735fppqza7ilspsvyidkrdpq2yd3j5xfjckzfh5w"; depends=[GSVA igraph mpmi pheatmap]; }; - psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; }; + psbcGroup = derive2 { name="psbcGroup"; version="1.5"; sha256="01q02lsjjj14b8si9pj12a5cvyq74lb9444vpwpxkbnsznx10bsy"; depends=[LearnBayes mvtnorm SuppDists survival]; }; + psborrow = derive2 { name="psborrow"; version="0.1.0"; sha256="1swkwi65zdsl8q12191lj2vhwbhkhb302zh6rmhcf0bg9cj0xpj5"; depends=[data_table doParallel dplyr foreach futile_logger ggplot2 MatchIt matrixcalc mvtnorm rjags survival tidyr]; }; pscl = derive2 { name="pscl"; version="1.5.5"; sha256="0vzf5wazs92bhqhqd66v3vwmbfmnh67gb2466g1xxawim649nk05"; depends=[MASS]; }; pscore = derive2 { name="pscore"; version="0.1-2"; sha256="1sfkxs2kv8lq87j3q9ci7j38c7gzfkp2l36lwcdhiidr2nls2x0c"; depends=[ggplot2 lavaan reshape2]; }; psd = derive2 { name="psd"; version="2.1.0"; sha256="18zd9sa86sx52ncwx6qc9lch2j4kfn8l6w6vryjp5awkf89mv3b2"; depends=[RColorBrewer Rcpp RcppArmadillo]; }; psda = derive2 { name="psda"; version="1.4.0"; sha256="0if42szf0gkgdl7d02x43i0fdb6hp47j918vx06aw7qcw6a8j3k2"; depends=[ggplot2 plyr raster rgeos sp]; }; + psdr = derive2 { name="psdr"; version="1.0.1"; sha256="02ypgi1gxnp0mn9p1w2j34ypnpbkrwp9i0ma0i7657zddcfnf391"; depends=[devtools ggplot2 qpdf]; }; pse = derive2 { name="pse"; version="0.4.7"; sha256="0kigfzsvx3gw7jwym4f19dydwwarwxgmha7hpy54gg0zzi4k9icl"; depends=[boot Hmisc]; }; pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; pseudorank = derive2 { name="pseudorank"; version="1.0.1"; sha256="1hjcvl38di1digkqg7nysd7bkljz1v7y54z2rz10fyk9lyp9mpmy"; depends=[doBy Rcpp]; }; pseval = derive2 { name="pseval"; version="1.3.1"; sha256="1jgnv1l9adhwrmkmp6wkzz7jf7w1hyqy47ajr29l21p4g037py45"; depends=[survival]; }; - psfmi = derive2 { name="psfmi"; version="0.7.1"; sha256="0sjh1mlikrzi6bs7qfsnn3k2n5as22ml5p11jxmv7b3m8sg47s7n"; depends=[car cvAUC dplyr ggplot2 lme4 magrittr mice miceadds mitml mitools norm pROC purrr ResourceSelection rms rsample stringr survival tibble tidyr]; }; + psfmi = derive2 { name="psfmi"; version="1.0.0"; sha256="19hm8qswvrg1a1nsby3nfd6avgxl84q77xi2y2frnlh7j92wm63x"; depends=[car cvAUC dplyr ggplot2 lme4 magrittr mice miceadds mitml mitools norm pROC purrr ResourceSelection rms rsample stringr survival tibble tidyr]; }; psgp = derive2 { name="psgp"; version="0.3-19"; sha256="0yaf69zk4zkpgx5zyksdxb2g4az0ci8v6r23phzcis9fd21y70ds"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; psica = derive2 { name="psica"; version="1.0.2"; sha256="1cnrd1p8ikv0hl97jwypw8np1ypa0d8k2mizwd1clkv7inbb264g"; depends=[BayesTree gridBase party partykit randomForest Rdpack rpart]; }; - psidR = derive2 { name="psidR"; version="2.0"; sha256="033bi61l9jslz4xhii19i23c10n4irqbzsfm5n54nzznwg85i6d9"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; + psidR = derive2 { name="psidR"; version="2.1"; sha256="06rsi6ai58yggf73hjaidjhlgc09jjk76a4drvvgfs3v0qm296mm"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; + psp = derive2 { name="psp"; version="0.1"; sha256="0ls8nqfddl9yqsz6binjf5smg3vbs5r65dqv92zn6hmb51akf7q5"; depends=[]; }; pspearman = derive2 { name="pspearman"; version="0.3-0"; sha256="1l5mqga7b5nvm6v9gbl1xsspdqsjqyhhdn4gc4qlz6ld7fqfq6cx"; depends=[]; }; pspline = derive2 { name="pspline"; version="1.0-18"; sha256="1iwsw52miil1v1yl99mzl28qi8gdjr56rlasmh8faqjlpn9z477p"; depends=[]; }; pspline_inference = derive2 { name="pspline.inference"; version="1.0.4"; sha256="1ijz642igm27xg3928w9ffvykai26aar5awbcilrjbkm6fk7yd4w"; depends=[assertthat dplyr magrittr mgcv plotrix plyr reshape2 rlang]; }; psqn = derive2 { name="psqn"; version="0.2.1"; sha256="0qxskb4bxi8d7lvsn0anhpslrl5g85nbswicfkr3nkmmhwi19d0z"; depends=[Rcpp RcppEigen testthat]; }; + psr = derive2 { name="psr"; version="0.1.0"; sha256="0lnszaspilk88hmdjbgid7nh0zrpc57mymchva4kqc3cpckw247a"; depends=[dplyr psych tidyr]; }; psrwe = derive2 { name="psrwe"; version="1.3"; sha256="09yzr4g3pldsn95n9nmjm4vj5fbv8xl2n8xr8i1ngf766yn65lqj"; depends=[BH cowplot dplyr ggplot2 randomForest Rcpp RcppEigen rstan StanHeaders]; }; pssm = derive2 { name="pssm"; version="1.1"; sha256="0r3d1mzc7bcz238lqq4y518400m2dqm5a1fb9gkfiari1ax099lv"; depends=[abind MASS MHadaptive numDeriv]; }; pssmooth = derive2 { name="pssmooth"; version="1.0.3"; sha256="08syh52gjaf72kq01v6b5dljmwi29nvmjmkkgmjb97zsi15z1wd3"; depends=[chngpt MASS np osDesign]; }; pstest = derive2 { name="pstest"; version="0.1.3.900"; sha256="1rhd4vgqpr9yq0pc3xql3nfgl30v20ldywapp9n967ky2dja4k0z"; depends=[glmx MASS]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; - psycModel = derive2 { name="psycModel"; version="0.3.0"; sha256="11258hhj7mgg1japbk10806471s5nrglwg14ps82s90n5nkq5mql"; depends=[dplyr ggplot2 glue lavaan lifecycle lme4 lmerTest parameters performance psych rlang stringr tibble tidyr]; }; - psych = derive2 { name="psych"; version="2.1.3"; sha256="1ibh1ivr280wpmk3qjgm715dk79wx0ikjl9jjjcqs03q6vz4wmdx"; depends=[lattice mnormt nlme]; }; - psychReport = derive2 { name="psychReport"; version="3.0.0"; sha256="1yqf580g8yjldqyng72h91yaqr0h0wjwx7j7zrrs1a8g1ybwdgl8"; depends=[broom cli dplyr ez xtable]; }; - psychTools = derive2 { name="psychTools"; version="2.1.3"; sha256="1i5m0x49nx0nlpgny27kg3c7340xn4a8vvc9rzsbqi1s9mdkzd9w"; depends=[foreign psych]; }; - psychmeta = derive2 { name="psychmeta"; version="2.5.0"; sha256="1c2sbl3f1rni3l6ydmx71yki1rnp1js97fmrd2sfqc8bxh376lrk"; depends=[boot curl data_table dplyr ggplot2 metafor progress purrr reshape2 rlang stringi stringr tibble tidyr]; }; + psycModel = derive2 { name="psycModel"; version="0.3.2"; sha256="0yb826sc8xajbai7x6p0ryvas3jizn3n8j0y7blykb4vhvcabq3x"; depends=[dplyr ggplot2 glue insight lavaan lifecycle lme4 lmerTest parameters patchwork performance psych rlang stringr tibble tidyr]; }; + psych = derive2 { name="psych"; version="2.1.9"; sha256="032h33i2qlwsw2iq82nri5y8hs7d593w40aghcvnibpi2wxf0x8l"; depends=[lattice mnormt nlme]; }; + psychReport = derive2 { name="psychReport"; version="3.0.1"; sha256="0mii4n24dfc8rh6jz81sil2wn9ml6vdaqn5m8caf3glv9k0v812c"; depends=[broom cli dplyr ez xtable]; }; + psychTools = derive2 { name="psychTools"; version="2.1.8"; sha256="0yyb9ngavm8zc6s8mn1q5x1szdmhlfplkry7ddmichibab0ds5pv"; depends=[foreign psych]; }; + psychmeta = derive2 { name="psychmeta"; version="2.6.0"; sha256="0rqdxld7wcw6h70s78c7bhas56xvl9hpva9zvzxghyyxd9zwbp7g"; depends=[boot curl dplyr ggplot2 mathjaxr metafor progress purrr rlang tibble tidyr]; }; psycho = derive2 { name="psycho"; version="0.6.1"; sha256="1a3qccr9jwrbwkfbrvckkhhk9qygrc5n4mq80kpzx0zy5bylxi0a"; depends=[bayestestR dplyr effectsize ggplot2 insight parameters scales stringr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-8"; sha256="0lfhfcmrk65gkr1yp317b515vmadbcf0vjcnc76d07yp6yfkz5qw"; depends=[flexmix Formula lattice modeltools psychotools]; }; psychonetrics = derive2 { name="psychonetrics"; version="0.9"; sha256="1z6k6j5r08swgqbc9132c4pp42aqyrmvl8185bw94zhyivpgkrar"; depends=[abind combinat corpcor dplyr GA glasso IsingSampler lavaan magrittr Matrix mgcv numDeriv optimx pbapply pbv psych qgraph Rcpp RcppArmadillo roptim tidyr VCA]; }; - psychotools = derive2 { name="psychotools"; version="0.6-0"; sha256="1qw5nfw3ww4y283rwqm0v4p2vyan4xjvjhjg8f3j6d7xprx5z8aj"; depends=[]; }; - psychotree = derive2 { name="psychotree"; version="0.15-3"; sha256="18lr9dlv5l5fw88n61ch251ddgy1cv6klcj7ba3fg109b86p3bgf"; depends=[Formula partykit psychotools]; }; - psychrolib = derive2 { name="psychrolib"; version="2.5.1"; sha256="0l2g3b3s654hjxhmkx5rncrrz5ccbdw396ip5sfz2rm34lfz13ck"; depends=[Rcpp]; }; + psychotools = derive2 { name="psychotools"; version="0.6-1"; sha256="16fi6ra56jzjgygfrg10nc1phfdhbkrywjljgiaqljpzfhx76qcb"; depends=[]; }; + psychotree = derive2 { name="psychotree"; version="0.15-4"; sha256="0ni8ajl0hzl4spm71c0myhv16an00j0brb4gyzg2fgkqs6rm34l2"; depends=[Formula partykit psychotools]; }; + psychrolib = derive2 { name="psychrolib"; version="2.5.2"; sha256="0d43zhpl5ik90hqpdy62x7rwmxag3z1mdrn3cl1whr04rmymhk20"; depends=[Rcpp]; }; + psymetadata = derive2 { name="psymetadata"; version="1.0.0"; sha256="16xcjxa8h7x58ssvdmiy1byxxmppmxjgf9m5xacm6w1nyw062jd5"; depends=[Rdpack]; }; psymonitor = derive2 { name="psymonitor"; version="0.0.2"; sha256="09288w2bk5jhnbyj516jqn5qb33yqqg5kqbg6ylqk7anlq2yg2sl"; depends=[doParallel foreach magrittr]; }; + psyntur = derive2 { name="psyntur"; version="0.1.0"; sha256="0dh7vdj3ynsxibcf0wmh5h4yknijg78azjzlma25glihpgd2nbbw"; depends=[dplyr effsize ez fastDummies formula_tools GGally ggplot2 ggthemes magrittr plyr psych purrr rlang tidyr tidyselect]; }; psyosphere = derive2 { name="psyosphere"; version="0.1.6"; sha256="1hcas3jk2n11lyw1ysmci0sysxf7qg9h2msqqg7q9nqp5gbf90np"; depends=[geosphere ggplot2 Hmisc lubridate plyr rgdal RgoogleMaps sp]; }; psyphy = derive2 { name="psyphy"; version="0.2-2"; sha256="1i9fayfbndn65hk16mlgxrnpw18gwa46rp0iqsj1m1ggq6pscjp1"; depends=[]; }; psyverse = derive2 { name="psyverse"; version="0.1.0"; sha256="0q402z884fwnd812bs44xqbsank89risli13v3njhjc337lj29wx"; depends=[yaml yum]; }; ptest = derive2 { name="ptest"; version="1.0-8"; sha256="1d30a23yknf7xgqj8adgr36pnh9dpffl1v5fq682f26fk3ss30qp"; depends=[quantreg]; }; + ptf = derive2 { name="ptf"; version="0.0.1"; sha256="1s9nzn823z2capil83vcfs7frg8f6bpygx8aw1zz4sacnhvryr52"; depends=[Matrix plyr rARPACK Rcpp RcppArmadillo]; }; ptinpoly = derive2 { name="ptinpoly"; version="2.8"; sha256="126chp92ha48agx5i819bzdij79zbgj32msijvaid3zhxjx7qy1j"; depends=[misc3d]; }; - ptm = derive2 { name="ptm"; version="0.2.2"; sha256="16ldvgndijp55s698053psxdin3lmsqi2ah5zs46g5s8szzhixwk"; depends=[bio3d Biostrings httr igraph jsonlite muscle RCurl seqinr XML xml2]; }; + ptm = derive2 { name="ptm"; version="0.2.4"; sha256="00szxlil7657ciwh17jkk1mv28m5h1la97ksgn3glypf5z7hsrd4"; depends=[bio3d Biostrings curl httr igraph jsonlite muscle RCurl seqinr xml2]; }; ptmixed = derive2 { name="ptmixed"; version="1.0.3"; sha256="03nkbwjybryifv1wk6a923w6pgfb10f9nkda2f2kfxpyi5hwqrzs"; depends=[aod GLMMadaptive lme4 matrixcalc moments mvtnorm numDeriv tweeDEseq]; }; pts2polys = derive2 { name="pts2polys"; version="0.1.3"; sha256="0rmgryv0vds20npvaqvvwrhrx0grfcz9qwdy2w3bx945r0chhw39"; depends=[Rcpp]; }; ptspotter = derive2 { name="ptspotter"; version="1.0.1"; sha256="1yppjmsxx01n9x0a0bbqsaxjixvrzyjq3112p94igg2xpp6h6cvl"; depends=[beepr log4r pryr stringr this_path]; }; @@ -13687,10 +14254,10 @@ in with self; { pubchunks = derive2 { name="pubchunks"; version="0.3.0"; sha256="14jzl0ra0d68s246a9jhfgp1wyy9g7d0rzahvl97crkklld1crvx"; depends=[data_table rcrossref xml2]; }; pubh = derive2 { name="pubh"; version="1.1.20"; sha256="03xy3cbs4cpn10n8bkcvkfnr0sbk8vaw1dzqf8v4lnmkqznnfwnl"; depends=[car dplyr emmeans Epi epiR epitools ggformula ggplot2 Hmisc huxtable lmtest magrittr moonBook sandwich sjlabelled sjmisc sjPlot survival tibble tidyselect]; }; publipha = derive2 { name="publipha"; version="0.1.1"; sha256="0ssmkz4bbrp5yvqb2da0i6shzm59ydw2sqkmqkid039782sibjch"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders truncnorm]; }; - pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.17"; sha256="0y0qq19lgmgqwlqg6av57n5nvav0gg3n1pya1wp3fmvwdxp205ah"; depends=[boot R2HTML RCurl XML]; }; + pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.18"; sha256="1y396jjybgawmd6nfmqz8zzgf2jk1hq4519njbi5q4wna8gg3gar"; depends=[boot R2HTML RCurl XML]; }; pubmedR = derive2 { name="pubmedR"; version="0.0.3"; sha256="153br94iqayrvvgzrzx0r3ilcrmnznfdnzk8yaii01s8i1g1wxcd"; depends=[rentrez XML]; }; pubtatordb = derive2 { name="pubtatordb"; version="0.1.4"; sha256="0i5azbf75bwxxzpsr5fc2hh22pbwix00hz9dcdpn5jgp2957f7wx"; depends=[assertthat DBI dplyr R_utils readr RSQLite]; }; - pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; + pullword = derive2 { name="pullword"; version="0.3"; sha256="125d091ba9h8h61y0m1bnflklmz898sp9w6ibca50vwz3d2qy5rz"; depends=[RCurl]; }; puls = derive2 { name="puls"; version="0.1.2"; sha256="0cdgcm4fvakk2mdjmlsnin3d0bf56wrm23p9f4bhh5j1ib68lsh5"; depends=[cluster dplyr fda fda_usc ggplot2 monoClust purrr rlang tibble tidyr]; }; pulsar = derive2 { name="pulsar"; version="0.3.7"; sha256="0gafp8mcp34c1j93sixy3413c32vn0xy8vhxm0b8v2mznbizgjbq"; depends=[Matrix]; }; pulseTD = derive2 { name="pulseTD"; version="0.1.0"; sha256="0sdnswinpnm0vvplrh5gl9gx4p03dx175mqxzg5r52rkzd3rfbsr"; depends=[AnnotationDbi Biobase GenomicAlignments GenomicFeatures ggplot2 Rsamtools S4Vectors SummarizedExperiment]; }; @@ -13698,7 +14265,7 @@ in with self; { puniform = derive2 { name="puniform"; version="0.2.4"; sha256="0v2977y9cwjx74xk0ig745g09wn7nrcsrg4f6v315sglsm18iaa8"; depends=[ADGofTest metafor Rcpp RcppArmadillo]; }; pureseqtmr = derive2 { name="pureseqtmr"; version="1.2"; sha256="1c2pcci3s949hi8hh0h03mr3m6qw3kvihfglwavx578kjm2qw0xz"; depends=[ggplot2 plyr rappdirs stringr tibble]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; - purgeR = derive2 { name="purgeR"; version="1.0"; sha256="0shv0g8f5wvalmy793d6wqw5xs0i3vzxika06bkgi5q1a51s5z4w"; depends=[doSNOW foreach progress Rcpp RcppProgress]; }; + purgeR = derive2 { name="purgeR"; version="1.3"; sha256="0nq6hw61hr11pxka0ff6x8xr8fqdbygld7dxzamgv7fi0v6xn979"; depends=[doSNOW foreach progress Rcpp RcppProgress]; }; purging = derive2 { name="purging"; version="1.0.0"; sha256="1b8f87jn6wyh4fp6b1660bd484wcf7xiajdg9dz2594aj1r94qsr"; depends=[MASS]; }; purrr = derive2 { name="purrr"; version="0.3.4"; sha256="1cj091rsjdj2xz16qhynyw72gh5cyhznifcfbrbygndfr4xwksr3"; depends=[magrittr rlang]; }; purrrlyr = derive2 { name="purrrlyr"; version="0.0.7"; sha256="03472xz0q30vjg45xv24zkd9b1w8ggi33vchxrimfnppdiqi3x0m"; depends=[BH dplyr magrittr purrr Rcpp]; }; @@ -13715,14 +14282,14 @@ in with self; { pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; pwr2ppl = derive2 { name="pwr2ppl"; version="0.2.0"; sha256="0v0f632b0zl4vbzb2x0294xqvsidvckx8b84qmqx5fbwp8jz8kgx"; depends=[afex car dplyr ez lavaan MASS MBESS nlme phia tidyr]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; - pwrFDR = derive2 { name="pwrFDR"; version="2.8.7"; sha256="1wv5lafb57907mmr57dh3mz10lv5q720gj0zp48jyjzj78p9kxbi"; depends=[]; }; + pwrFDR = derive2 { name="pwrFDR"; version="2.8.9"; sha256="16qlxwhljhf878a7jif2kjj7hvga01bgr8zb6bh555yacxxh4yiz"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; pwt10 = derive2 { name="pwt10"; version="10.0-0"; sha256="0zzdd7z9i2dc2br4njfwz7147c907pf25aihh2i3lldkqzcbxkr7"; depends=[]; }; pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; pwt9 = derive2 { name="pwt9"; version="9.1-0"; sha256="0m2df89lali9945avcv4gdjpxch9in7vdd042nx0q8nv0alb4ijd"; depends=[]; }; pxR = derive2 { name="pxR"; version="0.42.4"; sha256="1r0ffr5wxf67i1jh67v06vcmifw4hhhasd4aivic94bkvq4sqmn5"; depends=[plyr reshape2 RJSONIO stringr]; }; - pxweb = derive2 { name="pxweb"; version="0.10.4"; sha256="18h65kw471hwlznny001x4b9hrwx4nyb6px41fslzd8j4c0mnsfj"; depends=[checkmate httr jsonlite]; }; + pxweb = derive2 { name="pxweb"; version="0.11.0"; sha256="0qcvqg9ari6hqa1jqdw2nrsh3q1hv9l056gdiwc86lcg3arncsjh"; depends=[checkmate httr jsonlite]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyinit = derive2 { name="pyinit"; version="1.1.1"; sha256="122cgww99icdchr20qyn62q8pv1r817iyrfd6bj7zsq900x9gkxs"; depends=[robustbase]; }; pyramid = derive2 { name="pyramid"; version="1.5"; sha256="0lakn9knmhqvhrp98sc3hhwd4bilpplxbr5j9bv8w6li0qd3d04a"; depends=[]; }; @@ -13742,6 +14309,8 @@ in with self; { qcapower = derive2 { name="qcapower"; version="0.1.0"; sha256="14vszidjvyi8namwv5k0hpgdw1dpns5ilvxfwa920ivdg35709ki"; depends=[devtools ggforce ggplot2]; }; qcc = derive2 { name="qcc"; version="2.7"; sha256="0lc26w7p3d023lfr8v6v75m2vwqg9vi9pdipap19l4vbdq29l4zz"; depends=[MASS]; }; qccrs = derive2 { name="qccrs"; version="0.1.0"; sha256="0lwrmf2809zzdj5f25bb1psh57ibyw90ra41fy2i9vjmgph9wgiq"; depends=[dplyr magrittr purrr tibble]; }; + qch = derive2 { name="qch"; version="1.0.0"; sha256="1kizr319kjr6xsgz7n0dhgp8rxr4j1x4bcr5cnifkp6z2zh92vka"; depends=[ks mclust]; }; + qcr = derive2 { name="qcr"; version="1.3"; sha256="0jifg383qv935q9jlrlwy3y00nvjpgp2vm3qv5z0jdlr4kdw0pmm"; depends=[fda_usc MASS mvtnorm qcc]; }; qcv = derive2 { name="qcv"; version="1.0"; sha256="0hf02l9c1cpzs02mfn9swfc8l635qsvh6xrhj21g19h5rxaf8jwg"; depends=[]; }; qdap = derive2 { name="qdap"; version="2.4.3"; sha256="1fadzq7afavxfhcd8q6xy3g8d7jwy24zz1da2ig9bd8vrk5zjmnx"; depends=[chron dplyr gender ggplot2 gridExtra igraph NLP openNLP openxlsx plotrix qdapDictionaries qdapRegex qdapTools RColorBrewer RCurl reshape2 scales stringdist tidyr tm venneuler wordcloud XML]; }; qdapDictionaries = derive2 { name="qdapDictionaries"; version="1.0.7"; sha256="0jdx7bxmvc4p41jb4fhaagg5jsbsi7gva870cmyia72li52grhyn"; depends=[]; }; @@ -13750,14 +14319,15 @@ in with self; { qdm = derive2 { name="qdm"; version="0.1-0"; sha256="0cfxyy8s5zfb7867f9xv9scq9blq2qnw68x66m7y7nqlrrff5xdr"; depends=[]; }; qfasar = derive2 { name="qfasar"; version="1.2.1"; sha256="14370bmq4qx5j02va13wz52m2lgl4vb992p9587z9v2sxl1v4jjg"; depends=[Rsolnp]; }; qgam = derive2 { name="qgam"; version="1.3.3"; sha256="0vx2wf3rqc3j8i0870xrwxndkbgza0nnh7f0yxi8h67lfi7gws4s"; depends=[doParallel mgcv plyr shiny]; }; - qgcomp = derive2 { name="qgcomp"; version="2.7.0"; sha256="043z15h535lhnhi85dwd734p7z6ckfl64wkcb1p3vyq1lpm9y5zh"; depends=[arm future future_apply generics ggplot2 gridExtra pscl survival tibble]; }; + qgcomp = derive2 { name="qgcomp"; version="2.8.0"; sha256="1z9wy2nxjr6dnxphsnfbdbqgbyysbrygybbpaka4li42wkfnaz40"; depends=[arm future future_apply generics ggplot2 gridExtra pscl survival tibble]; }; + qgcompint = derive2 { name="qgcompint"; version="0.6.2"; sha256="0jn39bsm75z13r5hhbhw0hs9a9yy54zn7sv9xq88hgzl4qqqnaaa"; depends=[arm future future_apply ggplot2 gridExtra qgcomp survival]; }; qgg = derive2 { name="qgg"; version="1.0.4"; sha256="1xyviy73jl76bpv5izlkgf171qrypgv2wm5mi3s06cb7md8psrkb"; depends=[data_table MASS MCMCpack statmod]; }; qgraph = derive2 { name="qgraph"; version="1.6.9"; sha256="153bqfmsrghkg7598nfr57r3cxv6dn6ir084njl2sqq5np0sj9di"; depends=[abind colorspace corpcor dplyr fdrtool ggplot2 glasso gtools Hmisc igraph jpeg lavaan Matrix pbapply plyr png psych Rcpp reshape2]; }; qgshiny = derive2 { name="qgshiny"; version="0.1.0"; sha256="0ydhwg4abn8n9pwnjnwf1n1k854zw31z8f2splzdm5j279lsjg3r"; depends=[rmarkdown shiny]; }; qgtools = derive2 { name="qgtools"; version="2.0"; sha256="1gj7vbam53yr2rnxzfxng1p107bjcyjmyj47cxyzaiv19pznkbmw"; depends=[]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; qicharts = derive2 { name="qicharts"; version="0.5.8"; sha256="1n8jvb9dfb2k60zi9z99sncpwqbbj0h8zngmqq2k795zpa79gf1d"; depends=[ggplot2 lattice latticeExtra scales]; }; - qicharts2 = derive2 { name="qicharts2"; version="0.7.1"; sha256="1n6a5v6i3cqh3lib875rlc612a1h21zn39lsnn4kgfxsp2chcz62"; depends=[ggplot2 scales]; }; + qicharts2 = derive2 { name="qicharts2"; version="0.7.2"; sha256="01vbghxz9zwhjg6fl6djwidhsf0yy0gx3fx5d8syis4wc8xzhmby"; depends=[ggplot2 scales]; }; qif = derive2 { name="qif"; version="1.5"; sha256="12azs7c0anpd71d5663y1jrhirry6cr78wislp4fk64hmsbx7sx4"; depends=[MASS]; }; qiitr = derive2 { name="qiitr"; version="0.1.1"; sha256="0qbqx7g4np2ygyxiqmq5cww1az6ijjx6na6b1mp4ywmyxkjg3k29"; depends=[httr jsonlite purrr rstudioapi]; }; qkerntool = derive2 { name="qkerntool"; version="1.19"; sha256="14inry2hqvkmy0y2y3cl75ri4vri0hirv98gw2rymny69lia5x0s"; depends=[class]; }; @@ -13767,21 +14337,25 @@ in with self; { qmix = derive2 { name="qmix"; version="0.1.2.0"; sha256="172lhvj7adphxq9gws2i9lysc9bj1wpk60f4hf2h5sisnli15v0x"; depends=[BH Formula Rcpp RcppEigen rstan StanHeaders]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; qoma_smuggler = derive2 { name="qoma.smuggler"; version="0.0.1"; sha256="03p9i0kr6i3adpb9lcszcmdr9p26nfy7f8hw2sbydazglaw4hscr"; depends=[lubridate rhli tibble]; }; + qpNCA = derive2 { name="qpNCA"; version="1.1.6"; sha256="1mlv9yc929w8ypfzhfplhjbxxj1qdx4v9gh6dr68lylvm9ahx032"; depends=[dplyr ggplot2 knitr magrittr tidyr]; }; qpcR = derive2 { name="qpcR"; version="1.4-1"; sha256="1r01q7jv3w59yx1gc0qw91rq7rvdhqsi8y57sqqkmwyqfw2x2vsv"; depends=[MASS Matrix minpack_lm rgl robustbase]; }; qpdf = derive2 { name="qpdf"; version="1.1"; sha256="03lnfncw8qd1fwfyqh1mjvnsjr3b63wxbah0wp5g7z7gba90dwbi"; depends=[askpass curl Rcpp]; }; - qpmadr = derive2 { name="qpmadr"; version="0.1.0"; sha256="19q9xwkaklkvxvwmnhn3dm2rzcpwl9swygmzlcqa8008m019film"; depends=[checkmate Rcpp RcppEigen]; }; + qpmadr = derive2 { name="qpmadr"; version="1.1.0-0"; sha256="0krv3zhr42z2mkkbn2bkglzfxbf06dmd9vnnc3rcyhm1r85n4fbq"; depends=[checkmate Rcpp RcppEigen]; }; + qqboxplot = derive2 { name="qqboxplot"; version="0.1.0"; sha256="0807ww7cvc84hmwrwp2q5gy6v0qd01mwhj537403iy9z4z3wsvhv"; depends=[ggplot2]; }; + qqconf = derive2 { name="qqconf"; version="1.0.0"; sha256="0xav4y34nlfjdmjrz3mnw8maqnaswndkhnh4bh7kh6b5syfg26w5"; depends=[dplyr ggplot2 magrittr MASS rlang robustbase]; }; qqman = derive2 { name="qqman"; version="0.1.8"; sha256="1a6qp5wv9bvwjchfw8x4jh48hkynlnfr21a8vqgnswldvwbq7njq"; depends=[calibrate]; }; qqplotr = derive2 { name="qqplotr"; version="0.0.5"; sha256="1ija4ik3bc404yjm5pw4y32krs1gxn6jd05pqmc0ajawydvr4w1r"; depends=[dplyr ggplot2 MASS robustbase]; }; qqr = derive2 { name="qqr"; version="0.0.1"; sha256="1vi4nbm356vahm4hnvy686nysbn4n63p9cjd4i9dm73lhsf9ilmn"; depends=[dplyr rvest stringr tidyverse xml2]; }; qqtest = derive2 { name="qqtest"; version="1.2.0"; sha256="1v0qbbp2dpqflpg7yif7hipwdbz27isfyfwcia1ln7z0nnvkjm8c"; depends=[]; }; qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="2.1"; sha256="1viyllsd08dwgd5z930ml1nrcc9saaa18i5sx0bska8b0s7qh414"; depends=[ald lqr mvtnorm psych quantreg]; }; - qrNLMM = derive2 { name="qrNLMM"; version="2.0"; sha256="0j69zhs1v4546xrkwra9c2q3kmhf593vi05yjn3b3s5nzh2k0i1x"; depends=[ald lqr mvtnorm psych quantreg]; }; + qrNLMM = derive2 { name="qrNLMM"; version="3.0"; sha256="1sf2jjlnrpn6k45md4gpqy76x6g5mv8ykv3aa0l0w0j3f721659j"; depends=[ald lqr mvtnorm progress psych quantreg]; }; + qra = derive2 { name="qra"; version="0.2.1"; sha256="1zwpvjyz6s5zbiyz59fij2d6xf0w9yzrvkpvnwa1jnsh87v2m7ag"; depends=[bookdown ggplot2 glmmTMB knitr lattice latticeExtra lme4 rmarkdown]; }; qrage = derive2 { name="qrage"; version="1.0"; sha256="00j74bnkcpp0h8v44jwzj67q9aaw47ajc2fvgr6dckj9rymydinl"; depends=[htmlwidgets]; }; qrandom = derive2 { name="qrandom"; version="1.2.4"; sha256="0a75pz9bhy6bqxlz02bgkgi83hrq06p9ah7qf8n0pdc2rh3sy1cx"; depends=[curl jsonlite Rmpfr]; }; qrcm = derive2 { name="qrcm"; version="3.0"; sha256="0y1na936vk5qsir5plzjrbv39jpnq01qplza32z31x6y28is2fz9"; depends=[pch survival]; }; qrcmNP = derive2 { name="qrcmNP"; version="0.2.0"; sha256="0hxg9w4k4k14fan6hb476wnnnpf4y6xywc2vbjka7cmpl1ydw1p4"; depends=[qrcm survival]; }; - qrcode = derive2 { name="qrcode"; version="0.1.1"; sha256="12j0db8vidlgkp0dcjyrw5mhhvazl7v7gpn9wsf2m0qnz1rm4igq"; depends=[R_utils stringr]; }; + qrcode = derive2 { name="qrcode"; version="0.1.3"; sha256="0dq6gk2i7shxz3in94r2i0hcxi7aw9x9jqjgz3bdjhdajczh2bvy"; depends=[R_utils stringr]; }; qrencoder = derive2 { name="qrencoder"; version="0.1.0"; sha256="1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8"; depends=[base64enc png raster Rcpp]; }; qrjoint = derive2 { name="qrjoint"; version="2.0-3"; sha256="1ymnq8mbvxfdi63f4554mjlix5n864v2nask27pkf3yfxmkr346k"; depends=[coda kernlab Matrix quantreg]; }; qrmdata = derive2 { name="qrmdata"; version="2019-12-03-1"; sha256="0738wiac0dgani0yy61kvpra7zj8qj5ak627i8cjd42zf1yjziz5"; depends=[xts]; }; @@ -13789,21 +14363,23 @@ in with self; { qrmtools = derive2 { name="qrmtools"; version="0.0-14"; sha256="1gjaq6i0xhsivcmivbn4xxsqasbvf95p1w0rzpycxzgcfarxwwx3"; depends=[ADGofTest lattice Quandl quantmod rugarch xts zoo]; }; qrng = derive2 { name="qrng"; version="0.0-8"; sha256="1yagh7llrg208mdmwyq7gy4c7h20hj4s5ikp6nc3q8pl7avmq3jc"; depends=[copula randtoolbox]; }; qrnn = derive2 { name="qrnn"; version="2.0.5"; sha256="0ligz67kbfg5cmvacnb7y0ms1v0c7mbvbcfsxyfiz543ppl3xn1v"; depends=[]; }; - qs = derive2 { name="qs"; version="0.24.1"; sha256="00lfr4ib712yxqqrnavnlr6ckj6aa08cc6fdly02p90a9534qgrn"; depends=[RApiSerialize Rcpp stringfish]; }; + qs = derive2 { name="qs"; version="0.25.1"; sha256="0qzrhc5jsygj813k956b00h4b6haynz44rk6a4v34fv4ywq9ba7w"; depends=[RApiSerialize Rcpp stringfish]; }; qsimulatR = derive2 { name="qsimulatR"; version="1.0"; sha256="0d2al6rnsyj58jhwczn2rx09b007s2yjihpk7i65law7v8dmxiaf"; depends=[]; }; qsort = derive2 { name="qsort"; version="0.2.3"; sha256="1xvp29dijfa2207wyw3z09rmffn61fngfy0f00qjk284n1jnnvrg"; depends=[cowplot ggplot2 gridExtra purrr]; }; qst = derive2 { name="qst"; version="0.1.2"; sha256="0f5c4088y9c5fxyy2dyfkp049lnzvys3zyizazxsa82xwkwsbc8a"; depends=[DBI dbplyr dplyr magrittr RSQLite tibble]; }; - qsub = derive2 { name="qsub"; version="1.1.1"; sha256="0k3k94p9ym65cj554f8hyrfc9xw9i8nsgynnmlim66d5dsq2xswa"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; + qsub = derive2 { name="qsub"; version="1.1.3"; sha256="0ygys183pj420jr9bz13x009qis3qr1aqxgw3l2d4xx3xv90iy3g"; depends=[dplyr glue pbapply processx purrr random readr ssh stringr tidyr]; }; qte = derive2 { name="qte"; version="1.3.0"; sha256="0x65n2qyq1py0nrachxkqd273mywkw433ai5x6ni3ak4ckbp3g66"; depends=[BMisc formula_tools ggplot2 Hmisc knitr msm pbapply quantreg texreg]; }; qtl = derive2 { name="qtl"; version="1.48-1"; sha256="098mgmfj8ndi8yipr9b3f6gbbh78cgp9j7y561nlnhrnyc8bsih9"; depends=[]; }; qtl2 = derive2 { name="qtl2"; version="0.24"; sha256="1558khh0zkwm0rdk87krv9836krvwv5h7ymlz9bsrgcvypyr9186"; depends=[data_table jsonlite Rcpp RcppEigen RSQLite yaml]; }; qtl2convert = derive2 { name="qtl2convert"; version="0.24"; sha256="1anax4plss2nlp0q9l0igzdxhcy4dcrb823vgv71r55wascwl7vx"; depends=[qtl qtl2 Rcpp]; }; qtl2fst = derive2 { name="qtl2fst"; version="0.24"; sha256="1x7cz8vnvqa7b35bai81bfnkycgp8hxamp5n3qi7law6nw8hl2k3"; depends=[fst qtl2]; }; + qtl2ggplot = derive2 { name="qtl2ggplot"; version="1.1.0"; sha256="1d2gchcw3ywc8dj3ivrn1qwcyw45m3qx9csya8vkis5zklx55w5q"; depends=[assertthat dplyr ggplot2 ggrepel purrr qtl2 RColorBrewer Rcpp rlang stringr tidyr]; }; + qtl2pattern = derive2 { name="qtl2pattern"; version="1.0.17"; sha256="0g8xk6zvlr6s18mrkw0ry3mas74k0abajp1ddqfdwnj81gsh6vn4"; depends=[assertthat dplyr fst ggplot2 purrr qtl2 qtl2fst RColorBrewer rlang stringr tidyr]; }; qtl2pleio = derive2 { name="qtl2pleio"; version="1.4.3"; sha256="0az71vgj1gv7rfz0hnc9rysh49ak2pnkvmih5mwmymr4an84c34k"; depends=[dplyr gemma2 ggplot2 magrittr MASS Rcpp RcppEigen rlang tibble]; }; qtlDesign = derive2 { name="qtlDesign"; version="0.941"; sha256="138yi85i5xiaqrns4v2hw46b731bdgnb301wg2h4cfrxvrw4l0d5"; depends=[]; }; qtlbook = derive2 { name="qtlbook"; version="0.18-8"; sha256="1c849xy2ki7niddajv5wnsm0zdp5381w8zm9lc8rvkdbs2v6rhf4"; depends=[]; }; qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; }; - qtlcharts = derive2 { name="qtlcharts"; version="0.12-10"; sha256="1s7kbjiacjqi6sm5jaxmip3vp8hmqqypllgsidbxnhi6ycr19804"; depends=[htmlwidgets qtl]; }; + qtlcharts = derive2 { name="qtlcharts"; version="0.14"; sha256="1w83x6yrq3hj2sahc5sz1rj5czn408ig35gb90jn36g4ar8zivxp"; depends=[htmlwidgets qtl]; }; qtlhot = derive2 { name="qtlhot"; version="1.0.4"; sha256="0gf0fsq91g830vqg5kz01zznm40qpjncy964ccvmms3i6d3hxd9m"; depends=[corpcor mnormt qtl]; }; qtlmt = derive2 { name="qtlmt"; version="0.1-6"; sha256="023h60z8d05832l2g7mg776hfjb0i7xpvhz3i899rc3h5pgjd94c"; depends=[]; }; qtlnet = derive2 { name="qtlnet"; version="1.5.4"; sha256="0jdf3hyzas0lyv2v4gqai9mhh7218a1mvm0nlwv9hfdbij0hi84v"; depends=[graph igraph pcalg qtl sem]; }; @@ -13814,20 +14390,21 @@ in with self; { quadprog = derive2 { name="quadprog"; version="1.5-8"; sha256="1ka9g8zak8sg4y2xbz93dfrldznlk9qpd4pq9z21cdcdn3b8s4i2"; depends=[]; }; quadprogXT = derive2 { name="quadprogXT"; version="0.0.5"; sha256="1yna2kx9pr58vyy6f4mwx4a6avjz84wwhcary88v1k0ihhv9swcz"; depends=[quadprog]; }; quadrupen = derive2 { name="quadrupen"; version="0.2-8"; sha256="1n3wqbdfwkrajhdkng6f8ixdz94znpqdfss872wrk0rz9bhpa03l"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 scales]; }; + quadtree = derive2 { name="quadtree"; version="0.1.2"; sha256="1k0hxc7ryw8avnyxs3clldjs9kypz0bh687gp6mhlf255fmpx0z2"; depends=[raster Rcpp]; }; qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; qualV = derive2 { name="qualV"; version="0.3-3"; sha256="1yyqk223ydcc0125gsn33a4mcdp8bd76fpn8kj9bfz9g78b8dqmx"; depends=[KernSmooth]; }; qualmap = derive2 { name="qualmap"; version="0.2.0"; sha256="04kg4vz18zvkd6m37ng70ggi93pynwxi2ahh4n7n78f4rqa1d3nz"; depends=[dplyr glue leaflet purrr rlang sf]; }; qualpalr = derive2 { name="qualpalr"; version="0.4.3"; sha256="1hlssqj2129796d00gnip3ih5b705qasw0hkj25xfz7xak0vdbkm"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; - qualtRics = derive2 { name="qualtRics"; version="3.1.4"; sha256="0p1c19hizqyxzhrkaclglzswcfpj1w3nfkn2q2h737fmhy3hwgnz"; depends=[assertthat dplyr httr jsonlite lifecycle lubridate purrr readr rlang sjlabelled stringr tibble tidyr]; }; + qualtRics = derive2 { name="qualtRics"; version="3.1.5"; sha256="11gb9ri3c5553fl9im8m26p16c8araxl4lyqk66b352cx41cf4x9"; depends=[assertthat dplyr glue httr jsonlite lifecycle lubridate purrr readr rlang sjlabelled stringr tibble tidyr]; }; qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; qualypsoss = derive2 { name="qualypsoss"; version="1.0.0"; sha256="1pvf9b9yw8317wnh1x1jkmwl4cl0r9q7npfw0xzgbs8mfpl9j2ah"; depends=[doParallel foreach MASS mvtnorm]; }; quantable = derive2 { name="quantable"; version="0.3.6"; sha256="15q4phc2j7aihl8f4qzpdwxcvshq2cfzkfcxc8k4qypsxk9a00sb"; depends=[caret dplyr e1071 ggplot2 ggrepel gplots Matrix plyr pROC RColorBrewer readr reshape2 rlang scales stringr tibble tidyr]; }; quantdates = derive2 { name="quantdates"; version="1.0"; sha256="1hyds8rwr1yg740aq4w5fqjrwdf3dl4phf8mj8qsgbb7i0wbbf3q"; depends=[lubridate]; }; quantdr = derive2 { name="quantdr"; version="1.2.0"; sha256="03dhcb5p9kkyl6qvpxbsjlrnjq0970xcr62j15jyhi878llzqk2n"; depends=[dr KernSmooth MTS mvtnorm quantreg]; }; - quanteda = derive2 { name="quanteda"; version="3.0.0"; sha256="0b1jfkdhpsg5jhjz4p0nf4cmi9p8w40wv3i2f17jf2x1n1y2hjj8"; depends=[fastmatch magrittr Matrix Rcpp RcppArmadillo RcppParallel SnowballC stopwords stringi xml2 yaml]; }; + quanteda = derive2 { name="quanteda"; version="3.1.0"; sha256="0gafbb73gcxx2gq9q7bg88alyhymkr471lp394m5ydij6mdm4hb9"; depends=[fastmatch magrittr Matrix Rcpp RcppArmadillo RcppParallel SnowballC stopwords stringi xml2 yaml]; }; quanteda_textmodels = derive2 { name="quanteda.textmodels"; version="0.9.4"; sha256="0r2nls93nriw97z0rmmpn2bb8c3jr571hv5slqj68p7ibr06rh1h"; depends=[glmnet LiblineaR Matrix quanteda Rcpp RcppArmadillo RcppParallel RSpectra SparseM stringi]; }; quanteda_textplots = derive2 { name="quanteda.textplots"; version="0.94"; sha256="1as7mpy3ihja5d9nw7c30w0yhaklpmn41bgw2cvpic2rbp5828fa"; depends=[extrafont ggplot2 ggrepel igraph Matrix network quanteda RColorBrewer Rcpp sna stringi]; }; - quanteda_textstats = derive2 { name="quanteda.textstats"; version="0.94"; sha256="1kih3mgijzjk3az6j13mkgxv6z9pf4wql0qzfg286h0kiwddzl2a"; depends=[Matrix nsyllable proxyC quanteda Rcpp RcppArmadillo RcppParallel stringi]; }; + quanteda_textstats = derive2 { name="quanteda.textstats"; version="0.94.1"; sha256="1hwkkk1q6h8fdd0wdbkg657zppg2l049bcnxw4zq602wfplxra5n"; depends=[Matrix nsyllable proxyC quanteda Rcpp RcppArmadillo RcppParallel stringi]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; quantilogram = derive2 { name="quantilogram"; version="2.1.1"; sha256="07mvgbk5qhkaihk2dn5c8cfac2xd9hfglh284sg4jkrkq0cfgrl8"; depends=[np quantreg SparseM]; }; @@ -13835,20 +14412,22 @@ in with self; { quantkriging = derive2 { name="quantkriging"; version="0.1.0"; sha256="0v6kckgzhgsn3158sc06xszdhmk8sfny10j1qyppxsl2hk89n8jf"; depends=[ggplot2 hetGP Matrix reshape2]; }; quantmod = derive2 { name="quantmod"; version="0.4.18"; sha256="0dbcrncv06iqcbkky95dd7l32xq0hhbnkb0kj8wwzym1jf748h5a"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; - quantreg = derive2 { name="quantreg"; version="5.85"; sha256="1y8sgl16yby1k7g23y6bdnfllwnxj3iik3fqp96iwm5jd8blb7q4"; depends=[conquer Matrix MatrixModels SparseM]; }; + quantreg = derive2 { name="quantreg"; version="5.86"; sha256="01fnp6ndh7npxj76xlynndacsgmcfr9kgh2waw0clx3mmwlwilbi"; depends=[conquer Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; - quantregGrowth = derive2 { name="quantregGrowth"; version="1.1-0"; sha256="0qh07z3whlcri4vsb6dsis8ww3qwy4ynlb86bscsbk41nrapy361"; depends=[quantreg]; }; + quantregGrowth = derive2 { name="quantregGrowth"; version="1.3-0"; sha256="0wba52277fxg0d8m5d6c2cajak7nzrrrx49asj4rwijns8i9kc3c"; depends=[quantreg]; }; quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; }; quantspec = derive2 { name="quantspec"; version="1.2-3"; sha256="0ifwq2jmvxhpijz9yd9hffkff6ixcliaqkp9ispp9k1b8icwi8zn"; depends=[abind quantreg Rcpp snowfall zoo]; }; - quarks = derive2 { name="quarks"; version="1.0.6"; sha256="1smn89qkws6lid18dkb3fzjxcf5mb813qcq796nppzhpxrc6sp21"; depends=[rugarch]; }; + quarks = derive2 { name="quarks"; version="1.0.9"; sha256="02yjmbv0lm940g74d4q6xhmv158ghis9n9s84g09j3q8wzkgmsld"; depends=[rugarch]; }; quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; - quarto = derive2 { name="quarto"; version="0.1"; sha256="0nn9k2gvvl274wv7ijg1pvzallkjfhp5dx5laxiylg8x1lv2kysf"; depends=[jsonlite rmarkdown yaml]; }; + quarto = derive2 { name="quarto"; version="1.0"; sha256="1733ck30p163m6zfxwr8kbzf8ks4zi0g5fi1azwdl97np5q3aarw"; depends=[jsonlite later processx rmarkdown rstudioapi yaml]; }; queryparser = derive2 { name="queryparser"; version="0.3.1"; sha256="1pz66f3wxvvv42l5hib7hbpy14s8a13gn0n57vf6v5zdnz423kdr"; depends=[]; }; + quest = derive2 { name="quest"; version="0.1.0"; sha256="15al3j850v7i59zr9yybxjrb3lnpd14369rp5vnpzwxy80jpy7d9"; depends=[car plyr psych psychTools str2str]; }; questionr = derive2 { name="questionr"; version="0.7.4"; sha256="0p2mshhmm4kk629rm38w6im7xxxphsg9qqrsdd3bwzma4dvxi2l1"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny styler]; }; queuecomputer = derive2 { name="queuecomputer"; version="1.1.0"; sha256="1lzc0hfva8dpz2q5g0abjc2avyqdffi8g1qi5h6mvx8qn5kx7bmw"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; queueing = derive2 { name="queueing"; version="0.2.12"; sha256="0hw1ykm24cjpfwh7ac7fjf7mhc59mq8wy2g07aacpy5ibwi8bbsf"; depends=[]; }; quhomology = derive2 { name="quhomology"; version="1.1.1"; sha256="0wiih00zk4682wy1r4nyifh76h5bnvl3f785wjzmrwylnfy951l3"; depends=[MASS numbers]; }; + quickNmix = derive2 { name="quickNmix"; version="1.0.3"; sha256="02qirbhggz2749k07ylqfdybzfly11r8pkylzz90zyndz5089r4j"; depends=[doParallel foreach]; }; quickPlot = derive2 { name="quickPlot"; version="0.1.6"; sha256="0mffialxdim8f5s0bw9bb7p8dbrfdgq1wqih441x27lnmrvhlsa8"; depends=[backports data_table fpCompare ggplot2 gridBase igraph raster RColorBrewer rgdal rgeos sp]; }; quickReg = derive2 { name="quickReg"; version="1.5.0"; sha256="1l1v3k8albxlaz18l2b2x2ryifq4pbdq6n4q7555hnfcik9rqmw5"; depends=[dplyr ggplot2 nortest psych rlang survival]; }; quickblock = derive2 { name="quickblock"; version="0.2.0"; sha256="0ij4ivpnkjzdixbq7pg4g1xkb031qawadr22qhzp0q210qhmhc0m"; depends=[distances scclust]; }; @@ -13867,58 +14446,64 @@ in with self; { qwraps2 = derive2 { name="qwraps2"; version="0.5.2"; sha256="1ars25aa50fn6m4v423pzs4rkplxhpi26qi3aq7f39bgmqpnpy83"; depends=[dplyr ggplot2 knitr Rcpp RcppArmadillo rlang xfun]; }; r_blip = derive2 { name="r.blip"; version="1.1"; sha256="1p33g6i6fq9c27d5ix9nd8prv90i4hrf91x34bldlw8041sjqxm0"; depends=[bnlearn foreign]; }; r_jive = derive2 { name="r.jive"; version="2.4"; sha256="12zjzjjy1dwhr1gxb5029p5l3wjhwaysja4zf6insdnx1fd0ybxd"; depends=[abind gplots]; }; + r02pro = derive2 { name="r02pro"; version="0.1"; sha256="1zciq86wpykvbd6zmh8b83dl4vpz53isi6hbbrz0h48sqb1g2006"; depends=[learnr]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2d3 = derive2 { name="r2d3"; version="0.2.5"; sha256="1wfr5qnywrvps25z9iwn04n6wwvam4340jwpszxbbawby48kjppn"; depends=[htmltools htmlwidgets jsonlite rstudioapi]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; r2dictionary = derive2 { name="r2dictionary"; version="0.1"; sha256="0assylz2ih96l4jily76hp524h5xbnc27ln8yjvk9c4q88yr8xfy"; depends=[rstudioapi stringr]; }; - r2dii_analysis = derive2 { name="r2dii.analysis"; version="0.1.6"; sha256="03sab7i1yqh6l2ac2s2qnvivx4mrgbpa2qwqx1sjhpc1wkd6bidd"; depends=[dplyr glue magrittr r2dii_data rlang tidyr tidyselect zoo]; }; - r2dii_data = derive2 { name="r2dii.data"; version="0.1.9"; sha256="1amvc24acwanz7z4ahj3bhp2jwqxk4xlsrga1ighgxyyvm0vq0hi"; depends=[]; }; - r2dii_match = derive2 { name="r2dii.match"; version="0.0.9"; sha256="1vxld5svhwj4g0f5gpc1vzb738h1939b9biijh2yr8bg99f7xd1c"; depends=[data_table dplyr glue magrittr purrr r2dii_data rlang stringdist stringi tibble tidyr tidyselect]; }; + r2dii_analysis = derive2 { name="r2dii.analysis"; version="0.1.12"; sha256="1fnwq5x6mryiafblfn1pks1pf0kca64a9mx3ic9q5f466qjr3flp"; depends=[dplyr glue magrittr r2dii_data rlang tidyr tidyselect zoo]; }; + r2dii_data = derive2 { name="r2dii.data"; version="0.2.2"; sha256="01ycncjjk8s2mi085dzxvsp4g98y0jsz14v9l7cf0wrvsz506n5v"; depends=[]; }; + r2dii_match = derive2 { name="r2dii.match"; version="0.0.11"; sha256="01iwb2jhbx8xllzplw0vvqhq7xp9xn560gdv1xbshmr6aklgsgzg"; depends=[data_table dplyr glue magrittr purrr r2dii_data rlang stringdist stringi tibble tidyr tidyselect]; }; + r2dii_plot = derive2 { name="r2dii.plot"; version="0.1.0"; sha256="0q1q8gh18hc4jbbynr6bhl6cnj0qyrwh2yrnp2agz5v5ykpvhxkz"; depends=[dplyr forcats ggplot2 ggrepel glue lubridate magrittr r2dii_data rlang scales]; }; r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; - r2mlm = derive2 { name="r2mlm"; version="0.2.0"; sha256="0c6qhjhxfapqx5aiq54msbhda5c8pazpdp2wxdqh8l2gjffvwc4p"; depends=[broomExtra dplyr lme4 magrittr nlme rlang stringr tidyselect]; }; + r2mlm = derive2 { name="r2mlm"; version="0.3.0"; sha256="15pn0pyn18bw1k120n29wssbvynq3ay0cxhxhj3zfw5ps4879liq"; depends=[broomExtra dplyr lme4 magrittr nlme rlang rockchalk stringr tidyselect]; }; r2pmml = derive2 { name="r2pmml"; version="0.26.0"; sha256="15npzyjd5n1zysffhcfp4c0wykk2nhwgs8j2x8fqyn9cv2l8abjk"; depends=[]; }; - r2rtf = derive2 { name="r2rtf"; version="0.2.0"; sha256="1bp37kz5alcc5ddf8kdyprn6srn4cwj1xf7lqa6x2a0kc3f7hp71"; depends=[]; }; + r2pptx = derive2 { name="r2pptx"; version="0.1.0"; sha256="12p3018b514kk1yxm1xyc0835j34zvpr1fz8k5rpiz30fbxjip58"; depends=[glue officer]; }; + r2r = derive2 { name="r2r"; version="0.1.1"; sha256="0vp0ak88m3ssca8b8kxf9w6qkxsdy0qs6cngrr9gqvbrnx0gh9j6"; depends=[digest rlang]; }; + r2rtf = derive2 { name="r2rtf"; version="0.3.1"; sha256="0icqk7awynasvwwkxf983c6jdgabm3mbw3kw7nqddavqmzcdl4cy"; depends=[]; }; r2shortcode = derive2 { name="r2shortcode"; version="0.1"; sha256="03djy8m146k31xgvwcbrd1nzwj4wdlvvwzgviv80kskgr6ld9jrj"; depends=[magrittr stringr]; }; - r2sundials = derive2 { name="r2sundials"; version="5.0.0-9"; sha256="1npil0cgk4jl0zwhsh74mm4p3n49cjljs62b8sfp57ysj2bdpvp9"; depends=[Rcpp RcppArmadillo rmumps]; }; + r2sundials = derive2 { name="r2sundials"; version="5.0.0-10"; sha256="1hv5wq6lxrv57pszxky4xiwhjhjlzxa4fh0flrrmrrk89dygkx9v"; depends=[Rcpp RcppArmadillo rmumps]; }; r2symbols = derive2 { name="r2symbols"; version="0.1"; sha256="1i4sd015dgkv5i89d0cphp3jmn4jn4wqfazklfglysf85b2cm4iw"; depends=[]; }; r3PG = derive2 { name="r3PG"; version="0.1.3"; sha256="188vjzjya3qxi2xgzxxvf6ys97yxgdbjivwc54f4as37k2ad7l6p"; depends=[]; }; r3dmol = derive2 { name="r3dmol"; version="0.1.2"; sha256="06wzszqcy50gks1bss81j1l2a4adi271pnz6310w57g681q1ng19"; depends=[bio3d htmlwidgets magrittr]; }; r4lineups = derive2 { name="r4lineups"; version="0.1.1"; sha256="1p0dnrp21zx1l9lqx01jnq54d5ppb8siibv47i4gsp7c7db9ymxc"; depends=[boot dplyr ggplot2 ggrepel here magick magrittr pROC psych purrr]; }; r4ss = derive2 { name="r4ss"; version="1.36.1"; sha256="03xin7avdbg5ayrcdbw5rx9sh6ingjq2kv3405h01vqf1jhkfsxk"; depends=[coda corpcor gdata gplots gtools kableExtra pso truncnorm]; }; r511 = derive2 { name="r511"; version="0.1.1"; sha256="1njsnjf0746cv6x7fznq4cg556fczqcfawwb869r3w9zv0zj1iy9"; depends=[assertthat dplyr httr tibble xml2]; }; - r5r = derive2 { name="r5r"; version="0.4.0"; sha256="18xab7rgrf9yhx1bnajnyy9iw89jwpwmsfdyypdzgdkyvjc4a15k"; depends=[checkmate curl data_table httr jdx rJava sf sfheaders]; }; + r5r = derive2 { name="r5r"; version="0.5.0"; sha256="1d5gm0jhhhfl8dl9pw0zmxpj7yagjc1yp2k7702mri8yz76c69xv"; depends=[checkmate curl data_table httr jdx raster rJava sf sfheaders]; }; r6extended = derive2 { name="r6extended"; version="0.1.2"; sha256="1kq1j5rx57053mslj8jx1s0wjvhis7x3y264zw44q4k2x48q9wxs"; depends=[digest hellno magrittr R6]; }; r6methods = derive2 { name="r6methods"; version="0.1.0"; sha256="18q1qd7hkxbk0yilqdk17cp7qbl4c71jv10z732539wcmy8svb1v"; depends=[dplyr glue magrittr miniUI purrr rstudioapi shiny stringr]; }; rADA = derive2 { name="rADA"; version="1.1.9"; sha256="0p47nqm8mki03pq5gzc2r5vx4vixs6hpf7am1fvadgi2bn2jrcl2"; depends=[car dplyr e1071 forestplot ggplot2 gridExtra Hmisc knitr lme4 lmerTest matrixStats openxlsx reshape2 stringr tidyr]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; + rATTAINS = derive2 { name="rATTAINS"; version="0.1.2"; sha256="1v6zf6f6fxa4qj4n5jrc6xc8rvhs219x1rdxgqk016fyjdarqb2i"; depends=[checkmate crul dplyr fauxpas fs hoardr janitor magrittr purrr rlang rlist tibble tidyjson tidyr]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; }; rAmCharts = derive2 { name="rAmCharts"; version="2.1.13"; sha256="1c9gz7jmkh8gfaq8lmcb66kavdldnlc3x1mc1c72di8zxcpgzprc"; depends=[data_table htmltools htmlwidgets knitr pipeR yaml zoo]; }; - rAmCharts4 = derive2 { name="rAmCharts4"; version="1.3.1"; sha256="05nzr6rcly0m927k0yv143gvh5ir8bvdidjcv6wwiixqs7wh6qf4"; depends=[base64enc htmltools htmlwidgets jsonlite lubridate minpack_lm reactR shiny stringr xml2]; }; + rAmCharts4 = derive2 { name="rAmCharts4"; version="1.4.0"; sha256="1nn7aakw4cs9gninclpnh3dk76yjw537cjl45liimgwp4w1h7wc5"; depends=[base64enc htmltools htmlwidgets jsonlite lubridate minpack_lm reactR shiny stringr xml2]; }; rAverage = derive2 { name="rAverage"; version="0.5-8"; sha256="09yap3qv02k5nidi6a4png9xa5yy7cb8hg8s2dq99wnc88s42d26"; depends=[]; }; rAvis = derive2 { name="rAvis"; version="0.1.4"; sha256="0svplnrn8rrr59v04nr1pz7d5r4dr1kdl0bd3kg8c3azxv47mxbp"; depends=[gdata maptools raster RCurl rgdal scales scrapeR sp stringr XML]; }; rBDAT = derive2 { name="rBDAT"; version="0.9.8"; sha256="0a64y43fadn5i1pgd6z5mvs1v3v0k0x8wrl5yf7xgw50n0zajfi7"; depends=[]; }; rBMF = derive2 { name="rBMF"; version="1.1"; sha256="16yg1k7vv88q421nk1a70626c7c54bwnb3x7kiyxv2c0ha00f3g8"; depends=[Matrix Rcpp]; }; - rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.1.0"; sha256="194j445nirvvkz880ax0zw2q1mkiy0khdfjl7bwiwj8knhhvkrhw"; depends=[data_table foreach GPfit magrittr]; }; + rBayesianOptimization = derive2 { name="rBayesianOptimization"; version="1.2.0"; sha256="0gwdzv4wl4n940ph23yhjh0s192k9visvivww5k1kmy2b1j88cva"; depends=[data_table foreach GPfit magrittr]; }; rBeta2009 = derive2 { name="rBeta2009"; version="1.0"; sha256="0ljzxlndn9ba36lh7s3k4biim2qkh2mw9c0kj22a507qbzw1vgnq"; depends=[]; }; - rBiasCorrection = derive2 { name="rBiasCorrection"; version="0.2.9"; sha256="04plbjwya821afik8zm5c7q456yncpwyg4yj8wrdlrz0qwxzly5m"; depends=[data_table future future_apply ggplot2 magrittr nls2 polynom]; }; + rBiasCorrection = derive2 { name="rBiasCorrection"; version="0.3.2"; sha256="0lnx38bxf1jgq3frlj1419a957h0abl72hpj0hb0hnlja8vq6fx3"; depends=[data_table future future_apply ggplot2 magrittr nls2 polynom]; }; rCAT = derive2 { name="rCAT"; version="0.1.6"; sha256="09jyjjbhpm44wrism3zgg56m01yimlcm3xks8g0cq36lsrclcigp"; depends=[pracma rgdal sp]; }; rCBA = derive2 { name="rCBA"; version="0.4.3"; sha256="10rc08gwsf15f4lci8bbgwpwj8n7k1m23hxk633v68g9amla5nvx"; depends=[arules R_utils rJava TunePareto]; }; rCMA = derive2 { name="rCMA"; version="1.1"; sha256="0dswshg80hbgcib5x9w791sh71q5s4435q8sm9dh170v4ngbax0w"; depends=[]; }; rCRM = derive2 { name="rCRM"; version="0.1.1"; sha256="03p2v1wb7hsvfhdcgawaz8vd2i8kh30dj8mjydlaywxyks6i5caz"; depends=[Rcpp RcppEigen]; }; rChoiceDialogs = derive2 { name="rChoiceDialogs"; version="1.0.6"; sha256="0lp8amdalirpsba44aa3r31xnhmi36qb9qf8f8gdxxbarpgprsbi"; depends=[rJava]; }; rClinicalCodes = derive2 { name="rClinicalCodes"; version="1.0.1"; sha256="1p4p8r2n0k8h9xdzbngb95rshjp3376f5lsx228biqmswhpkhvlf"; depends=[RCurl rjson stringr tm XML]; }; - rD3plot = derive2 { name="rD3plot"; version="1.0.10"; sha256="02brj6g35bw8cc9q00328h9cif1yj7m5cfdml9rxf7giyaqzy7ms"; depends=[igraph]; }; + rD3plot = derive2 { name="rD3plot"; version="1.0.22"; sha256="0s0968jvsicfaw4ankhbd2ylnk2k2ghfxmf2y30aqvjqz2czfzp6"; depends=[igraph]; }; rDEA = derive2 { name="rDEA"; version="1.2-6"; sha256="0045crn7azsy3ggzr28vw5jd4f5aw5nj16cjnjxy2md3skfbc3zw"; depends=[maxLik slam truncnorm truncreg]; }; rDNAse = derive2 { name="rDNAse"; version="1.1-1"; sha256="0cl51q61kwvdsm5f49cjjbzggqam1fnr6gp15cmy6m2yahyxg1lk"; depends=[]; }; rDecode = derive2 { name="rDecode"; version="0.1.0"; sha256="1d0rrhycw9anhvx6czz7axkzhzqprdgi9sqfglmc962zf1x3hmn2"; depends=[]; }; rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; - rEDM = derive2 { name="rEDM"; version="1.8.2"; sha256="10agydp7k75hwpk728l2sl8k1bxwnckfhzqysn54lby2f0dc35l6"; depends=[Rcpp RcppThread]; }; + rDppDiversity = derive2 { name="rDppDiversity"; version="0.0.2"; sha256="0833v5wkamqipfxpsdxz040q6vlgg9qqpwiaivvh8ar5sci10v88"; depends=[Rcpp]; }; + rEDM = derive2 { name="rEDM"; version="1.9.2"; sha256="1478yvscrx5ivci4dnjkfzcvdrjdfdja4vzxiyhx1h130489w49x"; depends=[Rcpp RcppThread]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; rENA = derive2 { name="rENA"; version="0.2.3"; sha256="067xpw1mgb2y15ld4qc6mnf4b9k7nw8am9qz4ms980wyfp4ffjmj"; depends=[concatenate data_table doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo scales]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; - rFIA = derive2 { name="rFIA"; version="0.3.1"; sha256="0q88q7vlnjc9waqkdv8b4in91laqhwc1c5fnsmxpyk30b5328vma"; depends=[bit64 data_table dplyr dtplyr ggplot2 lifecycle rlang sf stringr tidyr tidyselect]; }; + rFIA = derive2 { name="rFIA"; version="0.3.2"; sha256="0q1256frfd485bs3zay99ndlvz0x26286hy5vys364jdfjv25zda"; depends=[bit64 data_table dplyr dtplyr ggplot2 lifecycle rlang sf stringr tidyr tidyselect]; }; rFSA = derive2 { name="rFSA"; version="0.9.6"; sha256="1fxd194iq8jnlsnj76mjq2f6db7ln641qwfsf5v63kx3qqhn8x5s"; depends=[hash rPref tibble tidyr]; }; - rFerns = derive2 { name="rFerns"; version="4.0.0"; sha256="0a4i918xb3r602lxrgk8gm9jjvxzsm49gxdh1zdza2rrjc4fm36c"; depends=[]; }; + rFerns = derive2 { name="rFerns"; version="5.0.0"; sha256="1yw3np5iamnr7f3nrd507dkyz76nxmzdpinwxncv87yw30g6gnkq"; depends=[]; }; rGEDI = derive2 { name="rGEDI"; version="0.1.11"; sha256="0fkvy4p82jyfbbfymkfbrdyh13hk6a6wghk2myb64p5nhz8kv7iz"; depends=[bit64 curl data_table fs getPass ggplot2 hdf5r jsonlite lazyeval raster RColorBrewer rgdal rgeos sp]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGroovy = derive2 { name="rGroovy"; version="1.3"; sha256="172vm4diygzi4ipmw8bl03k0x3aps0h1vkvwvw539kamy7xb5w98"; depends=[rJava]; }; @@ -13928,13 +14513,13 @@ in with self; { rIntervalTree = derive2 { name="rIntervalTree"; version="0.1.0"; sha256="0xd6wcra4zvphfgnz1rnnslx96p840zlgms367370xm4hyg6d37x"; depends=[]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-10"; sha256="0a00s10yp22fkvk67dkq43sbphcqla65x9j4qpv076bmdchn7arw"; depends=[chopsticks rJava]; }; - rJava = derive2 { name="rJava"; version="1.0-4"; sha256="1rd9hcwp4464icy22mmis94jb9w5gk90h97j79cy6fixdxwq4ihx"; depends=[]; }; + rJava = derive2 { name="rJava"; version="1.0-5"; sha256="1pkgndppk498by44sai440l3i7vzndknbngn1q748cv39xvsbnrg"; depends=[]; }; rJython = derive2 { name="rJython"; version="0.0-4"; sha256="13fpcw37cca738v9idqgi3gv9avfkfwfacxj54p2c4wyg46ghnah"; depends=[rJava rjson]; }; rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; - rKOMICS = derive2 { name="rKOMICS"; version="1.0"; sha256="12wvb23ss4vfx15l6im8g2yqnbqv08mkwr2jkb8rdr9g1984lrlw"; depends=[ape circlize ComplexHeatmap dplyr factoextra FactoMineR ggplot2 ggpubr magrittr reshape2 stringr]; }; + rKOMICS = derive2 { name="rKOMICS"; version="1.1"; sha256="0zs7a75hgrj4ajbbxn0kmc2871rakyizhwdn7ryha8bgig4ld3cs"; depends=[ape circlize ComplexHeatmap dplyr factoextra FactoMineR ggplot2 ggpubr magrittr reshape2 stringr]; }; rKolada = derive2 { name="rKolada"; version="0.2.0"; sha256="0ikyjzg8xbzyah37dpfwq2slssz956irm4dj8b7zv6x9qxi09gj9"; depends=[dplyr glue httr jsonlite magrittr purrr rlang stringr tibble tidyr urltools]; }; rLDCP = derive2 { name="rLDCP"; version="1.0.2"; sha256="0k7zc1xyqmcl7070hhpqw1d2k1ij6bd4wjym8cw263pds2n7nx21"; depends=[XML]; }; - rLFT = derive2 { name="rLFT"; version="1.0.0"; sha256="0r5zyzwb9lzcbwllsblwhmzs4891jvpvzbifv93m75zm6bd5w69p"; depends=[Rcpp sf]; }; + rLFT = derive2 { name="rLFT"; version="1.0.1"; sha256="0d86z5ckhkavgr2xi9pk7pw8ss3whrssa7na43kj0pirax9cys4z"; depends=[Rcpp sf]; }; rLTP = derive2 { name="rLTP"; version="0.1.4"; sha256="04w432m03xwh0szshsrfw5h7wy43q4lj8z0y07k8w6gsf27cy5bx"; depends=[RCurl]; }; rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.4.1"; sha256="1bwg8mzddsc39km85b41bxp2hwqmb4g5a3010f6yp1qlgcb9rmj1"; depends=[plyr]; }; rMEA = derive2 { name="rMEA"; version="1.2.0"; sha256="1h5flmysyxv668si4ycfkkgairy7balk3nm0dsm91gns9xhvjqs0"; depends=[]; }; @@ -13945,19 +14530,19 @@ in with self; { rModeling = derive2 { name="rModeling"; version="0.0.3"; sha256="0xrjxayp59f31wwcqqkzs5my2j2lpbv1f4pp709fmqxz02vbdzhv"; depends=[caret e1071 MASS]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; rNOMADS = derive2 { name="rNOMADS"; version="2.5.0"; sha256="1symwz83v5lwl651lcyky2v4a13am4hhr1wmvliyvd9zyifkxsnq"; depends=[fields GEOmap MBA RCurl rvest stringr uuid XML]; }; - rNeighborGWAS = derive2 { name="rNeighborGWAS"; version="1.2.3"; sha256="08vzpv5ls8gaz7zw36ppbd9xa6qm4vxzp88p1b7z72ysri16pzhd"; depends=[gaston Matrix RcppParallel]; }; + rNeighborGWAS = derive2 { name="rNeighborGWAS"; version="1.2.4"; sha256="1j2rafli0ns34ms5s8zjxwyvlxhl88r5krw0qqzc3igd9sc0mjvn"; depends=[gaston Matrix RcppParallel]; }; rNeighborQTL = derive2 { name="rNeighborQTL"; version="1.1.2"; sha256="1balbky8jyvyn2v56dvx7b80gpys40pfslqrsv25sywmp0cqy68p"; depends=[gaston Matrix qtl]; }; rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; }; - rPACI = derive2 { name="rPACI"; version="0.1.2"; sha256="1lk2971590ivw5g65kj99qjn6zdsz9jb7zk0hggf82jmz4rfa175"; depends=[bnlearn]; }; + rPACI = derive2 { name="rPACI"; version="0.2.1"; sha256="1kzn4yzhaikcm87rzfrimr6nl8v7amrrgxy7wrj3mqbbmklk8ag5"; depends=[bnlearn ggplot2 ggpubr rlang tidyr]; }; rPAex = derive2 { name="rPAex"; version="1.0.1"; sha256="1v85qy8fg6vf1fqqqawzw4i9sfaihdqzbs0h91hpqbzkc4v7n2bb"; depends=[agricolae raster]; }; rPackedBar = derive2 { name="rPackedBar"; version="0.2.2"; sha256="1nh0kvj4bqkinczj8llcgy63ibsnk9vgsvm0vqg8g526x0vffdma"; depends=[data_table plotly scales shiny]; }; - rPanglaoDB = derive2 { name="rPanglaoDB"; version="0.2.0"; sha256="0bzhghiws3xgh5zz8yi5cd2vp9w3rfv2n1w881cyrhkw4s82qf61"; depends=[Matrix pbapply Seurat XML xml2]; }; + rPanglaoDB = derive2 { name="rPanglaoDB"; version="0.2.1"; sha256="1ykzih3idgp2yhbw4039hhhzv0nmrmn3wx2c4dxmgp5qzhrg42nf"; depends=[Matrix pbapply Seurat XML xml2]; }; rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.2"; sha256="1insdfvcn1pirsnf7nwfia0kzgsmh2zpghgfj2yc35ld1r9j2hp2"; depends=[mvtnorm ssanv]; }; rPraat = derive2 { name="rPraat"; version="1.3.2-1"; sha256="19qd3hylp8m0y171xhdd3k84izxyid7k2f9583gkxq8kik3md1v2"; depends=[dplyr dygraphs readr stringr tuneR]; }; rPref = derive2 { name="rPref"; version="1.3"; sha256="0vlzhxhf2x6gw015sjfw2638wv6hckg068rpbzncp7wprn9msa6y"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rQCC = derive2 { name="rQCC"; version="1.20.7"; sha256="0qbwz5imzgwfwkcvy23ayqvsd8da1nzmhzn8biapgn3gr23w2lx2"; depends=[]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; - rRofex = derive2 { name="rRofex"; version="2.0.5"; sha256="1zdll0wig5ng6r92j8jyblvvndaaxardzcicxwzvyh9ncq8m9p66"; depends=[dplyr glue httr jsonlite later lifecycle magrittr purrr rlang tibble tidyr websocket]; }; + rRofex = derive2 { name="rRofex"; version="2.0.6"; sha256="0yg3bxadgmn5d7bljzn9bjzy833lfi6bwz24z52f8qcbm1nqchgb"; depends=[dplyr glue httr jsonlite later lifecycle magrittr purrr rlang tibble tidyr websocket]; }; rSAFE = derive2 { name="rSAFE"; version="0.1.2"; sha256="0m7xzk76armkd86g643fmpif43dri07vrbq348y8hmys1gnx7ikd"; depends=[DALEX dendextend ggplot2 ggpubr ingredients sets]; }; rSCA = derive2 { name="rSCA"; version="3.1"; sha256="0dhd5325x05cbnw34mlipndw5xnncl9kj7kppb2s5bx2gllcdqqd"; depends=[]; }; rSEA = derive2 { name="rSEA"; version="2.1.1"; sha256="18108ds65ykxygbw1s4i5rb1ngzwymv1x3dhcv1lcwkmqplnaar9"; depends=[ggplot2 hommel]; }; @@ -13966,13 +14551,13 @@ in with self; { rSPARCS = derive2 { name="rSPARCS"; version="0.1.0"; sha256="0k46nhkdn68c7h7bbbdfwl02bldi1m3m62zbp20kh8np9bxy1rnk"; depends=[data_table geosphere plyr raster sp spatialEco tigris]; }; rSPDE = derive2 { name="rSPDE"; version="0.6.2"; sha256="0m3h3f5xk46mi87v61zbqyd3091sdcvknsmxjdyad5v6i46qx5xv"; depends=[Matrix]; }; rSQM = derive2 { name="rSQM"; version="1.3.14"; sha256="0m69n2pnfv2085dln6p149a5gw0gif9xk00xmad5s9j68hwjdmym"; depends=[dplyr EcoHydRology ggplot2 gsubfn mise ncdf4 qmap reshape2 stringr yaml zoo]; }; - rSymPy = derive2 { name="rSymPy"; version="0.2-1.2"; sha256="0jdl8ss3dbgjqrmmppb0ix1gqk9g28pbh6w5sybil046ic83s13i"; depends=[rJython]; }; - rTLS = derive2 { name="rTLS"; version="0.2.3.3"; sha256="1w5cb446nklrn7kfjm22ak5d1j5ln72vjp0jq7f1kq77kkzx63b5"; depends=[alphashape3d boot data_table doSNOW foreach Rcpp RcppArmadillo RcppProgress rgeos rgl sp]; }; + rTG = derive2 { name="rTG"; version="0.2.2"; sha256="0f1syh2v8a0klcz7rvi8nrn1qv8rjl69ssrliqnh2zpy7c6ck9xs"; depends=[brnn dplyr ggplot2 knitr magrittr mgcv]; }; rTRNG = derive2 { name="rTRNG"; version="4.23.1-1"; sha256="0jlkr57afkg6axkdk020rd3nybx1qzwvy1hjgfw8fwvm79x0kpr7"; depends=[Rcpp RcppParallel]; }; rTableICC = derive2 { name="rTableICC"; version="1.0.7"; sha256="1z896675kmm9p5dnmcnsz2205ynf05laqcxvlc9y0g5i0x8rf8v6"; depends=[aster partitions]; }; - rTensor = derive2 { name="rTensor"; version="1.4.1"; sha256="1ir2zqs3bvcfi9xwhj1l29qhnh5qvagz9cpw99lb2w73i28x47vz"; depends=[]; }; + rTensor = derive2 { name="rTensor"; version="1.4.8"; sha256="1ks4rwaish24sg5gc2jkfdqfq6h8gh9f3wdxk3dxjgpwjqwijz8f"; depends=[]; }; rTephra = derive2 { name="rTephra"; version="0.1"; sha256="045f2sp2j4hiwa9k1vs6cxr59x1yr34jq1z2crasxflsxbwa3xz8"; depends=[]; }; rTorch = derive2 { name="rTorch"; version="0.4.2"; sha256="03a9vls09mgd77xm1q1h1pqw4q026rdibbjr218706h4iqphrqm7"; depends=[jsonlite reticulate rstudioapi]; }; + rUM = derive2 { name="rUM"; version="0.3.0"; sha256="0b9p55mikgjxyv5qivng26m0kijpnl92qmzkgfj1n33m9ngcxk13"; depends=[bookdown conflicted rmarkdown table1 tidyverse]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; rWind = derive2 { name="rWind"; version="1.1.5"; sha256="1fdnbh6yprgbysv6j6i108q9z6b7r17kb2hg4i4sa97c2jlcb39s"; depends=[gdistance lubridate Matrix raster]; }; rWishart = derive2 { name="rWishart"; version="0.1.2"; sha256="0wzijc454mrvmggb7a5jqwjbmk0kzr4bmy0iwniz5cn343pr1rri"; depends=[lazyeval MASS Matrix]; }; @@ -13985,26 +14570,27 @@ in with self; { radar = derive2 { name="radar"; version="1.0.0"; sha256="1wh5j3cfbj01jx2kbm9ca5cqhbb0vw7ifjn426bllm4lbbd8l273"; depends=[]; }; radarBoxplot = derive2 { name="radarBoxplot"; version="1.0.0"; sha256="16s38yy984mb1hmsdw17z4nk2z4xg03xi0yrp7445yqv3fs1fghl"; depends=[]; }; radarchart = derive2 { name="radarchart"; version="0.3.1"; sha256="0gcxnbgj8ja1m4wzhbjy67m6zphf0c5ni9yx7sr7f0abm03ry753"; depends=[htmltools htmlwidgets]; }; - radiant = derive2 { name="radiant"; version="1.3.2"; sha256="02qc7s64ryfn0l88kfj61kdnrg8gl6dmrxzscgqh85fc1yaipjcf"; depends=[r_import radiant_basics radiant_data radiant_design radiant_model radiant_multivariate shiny]; }; - radiant_basics = derive2 { name="radiant.basics"; version="1.3.4"; sha256="0y4s3zhphkaxlgwmiz96nwxq1s87i2i1mnph062xghlm7x92bwc3"; depends=[dplyr ggplot2 lubridate magrittr patchwork polycor psych r_import radiant_data scales shiny tidyr]; }; + radiant = derive2 { name="radiant"; version="1.4.0"; sha256="1ippx0gzizrb00m8apmzfw5ahgnfsrja94dxd3gylai7c969f1d5"; depends=[r_import radiant_basics radiant_data radiant_design radiant_model radiant_multivariate shiny]; }; + radiant_basics = derive2 { name="radiant.basics"; version="1.4.0"; sha256="0ah3spq56w42lla38d9p0d3lkgvbvlvbpj6g9l3vjqafzp30sqzp"; depends=[dplyr ggplot2 lubridate magrittr patchwork polycor psych r_import radiant_data scales shiny tidyr]; }; radiant_data = derive2 { name="radiant.data"; version="1.3.12"; sha256="08bqqrfvpgyf613ikihwfnzb23l23f5nfs7zynnxbjxc1zfhbpny"; depends=[base64enc broom car curl dplyr DT ggplot2 glue jsonlite knitr lubridate magrittr markdown MASS patchwork plotly psych r_import randomizr readr readxl rlang rmarkdown rstudioapi scales shiny shinyAce shinyFiles stringi tibble tidyr writexl]; }; radiant_design = derive2 { name="radiant.design"; version="1.3.5"; sha256="1514s21jybyvpi2sx06xsxfrzgg07x7xxhwsazc61v3w1mllj2xw"; depends=[AlgDesign dplyr magrittr mvtnorm polycor pwr r_import radiant_data randomizr shiny]; }; - radiant_model = derive2 { name="radiant.model"; version="1.3.15"; sha256="1fn2gzgk4ylffwdfd13jqh2l80vaqjry924lwg5x901yhvzpy01f"; depends=[broom car data_tree DiagrammeR dplyr e1071 ggplot2 ggrepel lubridate magrittr NeuralNetTools nnet patchwork pdp psych r_import radiant_basics radiant_data ranger rlang rpart sandwich shiny stringr tidyr xgboost yaml]; }; + radiant_model = derive2 { name="radiant.model"; version="1.4.0"; sha256="1pkzhfiiyqhzyxkz5crb7drpycj4iw114y6321slqiflir2v8zv5"; depends=[broom car data_tree DiagrammeR dplyr e1071 ggplot2 ggrepel lubridate magrittr NeuralNetTools nnet patchwork pdp psych r_import radiant_basics radiant_data ranger rlang rpart sandwich shiny stringr tidyr xgboost yaml]; }; radiant_multivariate = derive2 { name="radiant.multivariate"; version="1.3.5"; sha256="1khgy3zj0q155dyky1bd2wfdj6r8jgw8aa6a2nj0rbnwa5zam913"; depends=[car clustMixType dplyr ggplot2 ggrepel gower GPArotation lubridate magrittr MASS patchwork polycor psych r_import radiant_data radiant_model rlang scales shiny]; }; radir = derive2 { name="radir"; version="1.0.4"; sha256="12a99ig3n6kp5wa5rjp2w1nal4qqjs6vq05d3lrqcyl3bind6lqb"; depends=[hermite]; }; radix = derive2 { name="radix"; version="0.6"; sha256="0290n0yax8649srdjbq4439h0d9f6jsmxayyhp86igcnszcxilnb"; depends=[base64enc bookdown digest downloader htmltools jsonlite knitr lubridate mime png progress rmarkdown rprojroot rstudioapi stringr whisker xfun xml2 yaml]; }; radlibs = derive2 { name="radlibs"; version="0.2.0"; sha256="1xl7pacqgiv68ay7mkr6bkx3rqqr7z8b9yh42n4zm7ybqfxbx6dr"; depends=[data_table lexicon stringr]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; - radous = derive2 { name="radous"; version="0.1.2"; sha256="0m9k921p0ax9mpgmp7k84q3k8d2ha077h9l1fkgk938rgmb19i5s"; depends=[checkmate curl glue httr readr]; }; + radous = derive2 { name="radous"; version="0.1.3"; sha256="1pip3givlkzb8i65nz6w724818jjr8j8nizpc3g35r9bvpmn7c2y"; depends=[checkmate curl glue httr readr]; }; radsafer = derive2 { name="radsafer"; version="2.2.5"; sha256="08088mifqlhkg8qrly2v1idvzl96fg2zymn812yqwppxjgcymzbz"; depends=[dplyr ggplot2 ggthemes magrittr qpdf RadData readr rlang scatterplot3d stringr utf8]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; - ragg = derive2 { name="ragg"; version="1.1.2"; sha256="0q28bwjdxpxm1wlkd8sxdf1m1q8wp4mmzp83d3m09nyy90ydkd8w"; depends=[systemfonts textshaping]; }; - rags2ridges = derive2 { name="rags2ridges"; version="2.2.4"; sha256="1xdk39jk357g6i2aav4c236xpcm7i7836y0zfm68gyw00jrbl6hq"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape RSpectra sfsmisc snowfall]; }; + ragg = derive2 { name="ragg"; version="1.1.3"; sha256="0ppypfq1vipwjngmiwdx1sj6x7m41v3dlnbsixdlnrf2nx82kxb2"; depends=[systemfonts textshaping]; }; + rags2ridges = derive2 { name="rags2ridges"; version="2.2.5"; sha256="0aqfm8f58xrq81bd80parkwj28i6m0bxdpq6qp1iy3qyxsq5as64"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape RSpectra sfsmisc snowfall]; }; ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.4"; sha256="17i3z0p3a4dqa0bch5l1r830w5nlxhdg71y82jipp6cfiwli588z"; depends=[abind Biobase CGHbase expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; ragtop = derive2 { name="ragtop"; version="1.1.1"; sha256="0vgc2q71g8ysccq19kbk9a4swxgd5qj91xm4bshfgdg5chxqnb50"; depends=[futile_logger limSolve]; }; rai = derive2 { name="rai"; version="1.0.0"; sha256="0qimfzchbrarkwmv3mxxbdgvqzk16sc8m1h140zm0cnfgr2pvi5p"; depends=[dplyr ggplot2 readr rlang]; }; rainbow = derive2 { name="rainbow"; version="3.6"; sha256="11vfcck17d2xjc049ci5i8l1nqv345anmd110gdz7654i1pj9lb3"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincin = derive2 { name="raincin"; version="1.0.3"; sha256="1wi430vsp5c0vm9p1srrs0nrbdb8x31qh7zph4v3fy7j0z226cwh"; depends=[lme4 popdemo]; }; + rainette = derive2 { name="rainette"; version="0.2.0"; sha256="1cxqqc6w2bdfxdqpikqa8ig69z8ay6wnbz24b6hswmjsrkjnbjcy"; depends=[dendextend dplyr formatR ggplot2 ggwordcloud gridExtra highr miniUI progressr purrr quanteda quanteda_textstats Rcpp rlang RSpectra shiny stringr tidyr]; }; rainfarmr = derive2 { name="rainfarmr"; version="0.1"; sha256="1gasnmyjnis6vv0krx6299ck2a6v9v1fgqajzqdpjaz2fsxn245i"; depends=[]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; ralger = derive2 { name="ralger"; version="2.2.4"; sha256="1j0np7h051dglva3dj9b64fagr99hvpsza1q2fnc7g3x1ki7mgni"; depends=[crayon curl dplyr robotstxt rvest stringi stringr tidyr xml2]; }; @@ -14020,14 +14606,13 @@ in with self; { randaes = derive2 { name="randaes"; version="0.3"; sha256="14803argy0xdd8mpn4v67gbp90qi2is4x6na9zw7i9pm504xji1x"; depends=[]; }; randcorr = derive2 { name="randcorr"; version="1.0"; sha256="1hnr0wvbsmgql39wlj4z2qbqn0fdfwyihfl6xgrlzvs9vrmig5xx"; depends=[]; }; randgeo = derive2 { name="randgeo"; version="0.3.0"; sha256="14hlh9k66lcbf0xhnxx12rrnyl8awqcsm3csvxdz23s5wnm2ya5p"; depends=[]; }; - randnet = derive2 { name="randnet"; version="0.2"; sha256="1hiqwz9q9nd8s5p97m6hgam1hmp33y0lks4sybzj2w3r5qdb1g2a"; depends=[AUC entropy irlba Matrix poweRlaw RSpectra]; }; + randnet = derive2 { name="randnet"; version="0.4"; sha256="0fyg4krmph0cwh7ji0nqywia39x372skyzghbgfr27665yz45x80"; depends=[AUC entropy irlba Matrix nnls poweRlaw pracma RSpectra]; }; rando = derive2 { name="rando"; version="0.2.0"; sha256="085g48yzwapxxfmm5bvkz0v7pmjwmakb7nl128550ppgc16wxkgb"; depends=[dplyr glue rlang tibble]; }; random = derive2 { name="random"; version="0.2.6"; sha256="0sdhagwjlhldb8hn6h4nd1sflzhwkapzybdlb8hzisy3w2ygjn9b"; depends=[curl]; }; random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-4"; sha256="19yzpjidw5pbrqfa5ln5hgghv0mq3cwl92z2isq25yydfl6qsl6h"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; randomForest = derive2 { name="randomForest"; version="4.6-14"; sha256="0kbmm0l42fc2d1rdq0l7k09d34kd87q4lx651ffsic4y84h8kf7l"; depends=[]; }; randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.10.1"; sha256="1ny8c3vn2zvdx12avwvlm4lp648jigkrkcvnhf5qmj8rh0w069v0"; depends=[data_table dplyr DT GGally ggplot2 ggrepel randomForest ranger reshape2 rmarkdown]; }; - randomForestSRC = derive2 { name="randomForestSRC"; version="2.11.0"; sha256="0i1p3hd061lkgafbw6b25d6gpb45j4jkjchawd455g90pd1zm5b2"; depends=[data_tree DiagrammeR]; }; - randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; + randomForestSRC = derive2 { name="randomForestSRC"; version="2.12.1"; sha256="0hmd9p21mxzsmsg3g5igfzj80g4i17cfnsqxkkhgf1sxxj60fhlw"; depends=[data_tree DiagrammeR]; }; randomLCA = derive2 { name="randomLCA"; version="1.1-1"; sha256="08flank5pmyh5ih63bfw5qaby3g8vfh8p36sjbmxfylicdydfjl7"; depends=[boot doParallel doRNG fastGHQuad foreach lattice Matrix Rfast]; }; randomNames = derive2 { name="randomNames"; version="1.5-0.0"; sha256="1lv1vqb4wgs0j1gqy84dpa30qsvbp6928zpshczpw87yf32k71vh"; depends=[crayon data_table toOrdinal]; }; randomUniformForest = derive2 { name="randomUniformForest"; version="1.1.5"; sha256="1amr3m7h5xcb8gahrr58233chsnx1naf9x5vpjy9p5ivh71xcxf7"; depends=[cluster doParallel foreach ggplot2 gtools iterators MASS pROC Rcpp]; }; @@ -14042,43 +14627,46 @@ in with self; { randtoolbox = derive2 { name="randtoolbox"; version="1.30.1"; sha256="0qg20ar6qns858jdzqhmfq7yji81czhr6cim257958gqpj66sn95"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.5"; sha256="17wyf9ljgdbpxgl9gy6f1279h88k0rjfcarw7kgp145bm3c36jwf"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; rangeMapper = derive2 { name="rangeMapper"; version="2.0.2"; sha256="00wnjvmqkqjdw1r60z95ax0zh5wsvclk5qqwwwv50d0p9kjv4939"; depends=[data_table DBI exactextractr future future_apply glue magrittr progressr raster RSQLite sf]; }; - rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.3"; sha256="028q6lxz1ljna38cz5647yv0vzjw3jpsqwqhzf5rshmvfi8c0vv2"; depends=[dplyr jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; - rangemap = derive2 { name="rangemap"; version="0.1.16"; sha256="0pwimfp3hz4zv9z7qhk4hm6m10gkmjgxxm0zgax92rmag69267xb"; depends=[concaveman dplyr maps maptools raster rgdal rgeos rgl rnaturalearthdata scales sf sp spatial]; }; - ranger = derive2 { name="ranger"; version="0.12.1"; sha256="1vr5akgh388iivrxi0g4pl2npq9dc4cim3ljk4kjf637q058wc7w"; depends=[Matrix Rcpp RcppEigen]; }; - rankFD = derive2 { name="rankFD"; version="0.0.5"; sha256="0988fr18faahb9z0514pljmby6pxmn3b0ynb6ymmi3n4vpzzj4ki"; depends=[coin lattice MASS Matrix]; }; + rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.4"; sha256="102z7ysbw0i1mbnwg0v3h0i094ksw91q84a53qyxndq4m6f557aj"; depends=[dplyr jsonlite MASS raster rgbif rgdal rgeos shiny sp spatstat spocc spThin]; }; + rangemap = derive2 { name="rangemap"; version="0.1.18"; sha256="17ycliswmsrc1rvyxj2ik2rs7f061dvam6ck0pm6myj52m2xg781"; depends=[concaveman dplyr maps maptools raster rgdal rgeos rgl rnaturalearthdata scales sf sp spatial]; }; + ranger = derive2 { name="ranger"; version="0.13.1"; sha256="02idcc6zbdz4wsi1mcwh7qyhmlbwvnzxwkdvvppxw7n2rh54z4v0"; depends=[Matrix Rcpp RcppEigen]; }; + rankFD = derive2 { name="rankFD"; version="0.1.0"; sha256="1qqdqbyr0kgjn83prfg5b5f5qsfs0gxxadzkxzd76s0yhryps6mm"; depends=[coin lattice MASS multcomp mvtnorm]; }; + rankUncertainty = derive2 { name="rankUncertainty"; version="1.0.1.0"; sha256="13xmc37v9w15jlcpbn96axpwqjwh8w3k1dgiwipzgwvd065qvj3f"; depends=[cpp11 magrittr Rcpp]; }; rankdist = derive2 { name="rankdist"; version="1.1.4"; sha256="1xqrkss8d5vv3blqpvrvdczsygphbx259hy9j7w9b2ahssw8cjr5"; depends=[hash optimx permute Rcpp]; }; rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; + ranlip = derive2 { name="ranlip"; version="1.0.1"; sha256="04jh7m8gmz0b4h507amnj708sg5qf4fzawybss01681hsnb3swnz"; depends=[Rcpp]; }; rapbase = derive2 { name="rapbase"; version="1.10.0"; sha256="0x1xr0qw5qq9rsas3ysxlvmim3jhkf5za4lxr6f15vx4rjfx77wv"; depends=[DBI devtools digest gistr httr knitr magrittr readr RJDBC RMariaDB sendmailR shiny yaml]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.3"; sha256="1pm4kdga2nz1cpmchdb0ad8gr3bqfm84b1kl32cyc0x3x5rr2syz"; depends=[httr jsonlite yaml]; }; rapidjsonr = derive2 { name="rapidjsonr"; version="1.2.0"; sha256="07zdirhbzmvq3cp4xn8ngk1lgxbbabzays315zxbs3sxrz6lzjb2"; depends=[]; }; rapidoc = derive2 { name="rapidoc"; version="8.4.3"; sha256="1i7f122iigbaah1c3g5vfmnypwilcgc1i3d0l3985s5fjj44dnhn"; depends=[jsonlite]; }; + rapidraker = derive2 { name="rapidraker"; version="0.1.3"; sha256="1dhjsv22rdsv668d8dzdd6pm5xy549iiycv6isjmc5cwj3dp5fyz"; depends=[openNLPdata rJava slowraker]; }; rapidxmlr = derive2 { name="rapidxmlr"; version="0.1.0"; sha256="14pa08yp8xmbqk8wwinz1xsphx75xq6vg8zgzcxc5zgmcf0ja5if"; depends=[]; }; rappdirs = derive2 { name="rappdirs"; version="0.3.3"; sha256="1161i3jgjvzjv4p8qbz9r976fnggkcrw3mlj4yd1h2svnijrz5a9"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.1"; sha256="14cbi3yag91lnr1yrbk8ra6j615z5a6h136dj3r6v628qahrhmsg"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; rappsflyer = derive2 { name="rappsflyer"; version="0.2.0"; sha256="1n0h4iqnzb5xr531b6nvqsjx4mpsg1gp85av2b9gqg0wrbzzizm7"; depends=[dplyr httr lgr retry stringr tidyr]; }; - rapsimng = derive2 { name="rapsimng"; version="0.2.0"; sha256="0cbszzx88n78zli7v9kklxqwjbp3mipjk6gjm6xz62f31wr2x11n"; depends=[dplyr jsonlite magrittr rlang tibble tidyr]; }; + rapsimng = derive2 { name="rapsimng"; version="0.3.0"; sha256="1zykznmb6qipkj8yxkf33vrvyqhsp0ajk34hnz7js1zvy5n8rd5l"; depends=[dplyr jsonlite magrittr rlang tibble tidyr]; }; raptr = derive2 { name="raptr"; version="0.1.7"; sha256="1gm99nnvn3b9xz6216masv7ji8j8vrkprzprkba5y1h22gzwxd3n"; depends=[adehabitatHR assertthat BH boot doParallel ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; rarms = derive2 { name="rarms"; version="1.0.0"; sha256="11wjxd3pxvjv1j2nz26l8f0kykk9w6lf08izhivfngp63dk2akns"; depends=[jsonlite]; }; - rasciidoc = derive2 { name="rasciidoc"; version="3.1.1"; sha256="1h5263r4ch2ssh7v61ah0x7nvrdnfagmrdfddbgfx5y9fphkzcz4"; depends=[checkmate document fritools gert highr knitr reticulate]; }; + rasciidoc = derive2 { name="rasciidoc"; version="3.1.3"; sha256="0ff41czw8mmg2rf2k8swssnm305wrqc0jn674in36s9mizdqiwdy"; depends=[checkmate document fritools gert highr knitr reticulate]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; - raster = derive2 { name="raster"; version="3.4-10"; sha256="1x9d364r6wsm261a0s303mfalk79d4h0lwqlvbwzg7khmz991rlr"; depends=[Rcpp sp]; }; + rassta = derive2 { name="rassta"; version="1.0.0"; sha256="1wknbhsvs4b7fsd04gz482r8pajl8z9n2n7vjvc2by9knmrm1ffk"; depends=[cluster data_table dplyr DT foreach GGally ggplot2 histogram KernSmooth kohonen plotly raster rlang scales shiny stringdist stringi terra]; }; + raster = derive2 { name="raster"; version="3.4-13"; sha256="120k4bkgwddrx8ijgdhsgjz8g8dxcwp9bx3kfzrhw00q1b289hir"; depends=[Rcpp sp]; }; rasterDT = derive2 { name="rasterDT"; version="0.3.1"; sha256="1dl083jm4x0shl7lq4in2alksgi63hp1p7j2cnsvkmwjaxygzm9v"; depends=[data_table fasterize raster sf]; }; rasterImage = derive2 { name="rasterImage"; version="0.4.0"; sha256="191m5k1rbbwziznmxbsq4g55afkw8gb5011i70f3wx3dscr3phxz"; depends=[plotrix]; }; - rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; + rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.2"; sha256="0az96k8l7yjya5mg5ckda43qy9h8iad5gyyxi1ycld3kzcwiinhj"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; - rasterVis = derive2 { name="rasterVis"; version="0.50.2"; sha256="0fl766wx5jz8ylpd28czkvl32pk1s57nbfsn8kxrwfvx5cfnfkxr"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp terra viridisLite zoo]; }; + rasterVis = derive2 { name="rasterVis"; version="0.50.3"; sha256="10njks2kwyh5rp2b6sf2hffxzzwwhskb8m98l73p8yrvsdri1gyj"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp terra viridisLite zoo]; }; rasterdiv = derive2 { name="rasterdiv"; version="0.2-3"; sha256="1n0zrncda3nk4x8l9wb0acdx25dlki9wwrg874qwhd73cx0iy0rp"; depends=[foreach progress proxy raster svMisc]; }; rasterize = derive2 { name="rasterize"; version="0.1"; sha256="18nrhmq1qmi05rkyr86xsyc8nz0fbdpf2d45h62bbfzbfynqd4qy"; depends=[png]; }; rasterly = derive2 { name="rasterly"; version="0.2.0"; sha256="1fv0ayh8r78qss7ikcwnj0i5x8iyz4c3icsfb554zji9bw30x7qr"; depends=[data_table ggplot2 magrittr plotly Rcpp rlang]; }; rasterpdf = derive2 { name="rasterpdf"; version="0.1.1"; sha256="0zi54nifbb4dzb29i8rskynblw3z42vzaykwbq30ia5zs9q1bvm5"; depends=[png]; }; - ratPASTA = derive2 { name="ratPASTA"; version="0.1.2"; sha256="1ddxryccsq0v3lvnjyl8x4z1yxw59zq5g4lwh5pnn1cykl0z7q1f"; depends=[dplyr ggplot2 ggpubr ggsci hms lubridate magrittr plyr rjson stringr tidyr]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.4.1"; sha256="06x759jxr5zcnvg9q120n5bpipkb16piw15kxrpk7i918mby889b"; depends=[assertthat]; }; ratematrix = derive2 { name="ratematrix"; version="1.2.3"; sha256="0bnwwkmjsxlv4qkkwq93d7nrqb7pyyd70ffpm98xsxfy1ygdxjqq"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; - rater = derive2 { name="rater"; version="1.1.0"; sha256="18yfrsjv5xzhdn017dvacn7wrp89hz0cp57hlhimch498nqazkvs"; depends=[BH ggplot2 loo Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders]; }; + rater = derive2 { name="rater"; version="1.2.0"; sha256="1y4hhcnxdlw17w0ihv108p3rkwwdis7i7vc0rp7l6pfz7an8pw8r"; depends=[BH ggplot2 loo Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; }; @@ -14086,47 +14674,49 @@ in with self; { ratios = derive2 { name="ratios"; version="1.2.0"; sha256="16q9v2lhgklvdp3hi9x3afdldznfpwg775p80m2g5074q2dzjpgg"; depends=[data_table stringr]; }; rattle = derive2 { name="rattle"; version="5.4.0"; sha256="1cg26k491f78yqwis07djad8b3f9ndqwqylbh5sh66l2j9bdpmz5"; depends=[bitops dplyr ggplot2 magrittr rpart_plot stringi stringr tibble tidyr XML]; }; rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; - raveio = derive2 { name="raveio"; version="0.0.3"; sha256="02f8y2q3s21vr2d27ix707jwglm3pkr800f5fw5xfnk7jzs347gc"; depends=[data_table dipsaus edfReader fst glue hdf5r ini jsonlite later lazyarray R_matlab R6 rlang stringr yaml]; }; + raveio = derive2 { name="raveio"; version="0.0.4"; sha256="0cbv7g96d342gmahyn0xw4q4458q9xd9bw9yccbsz3bwv97z0as9"; depends=[BiocManager data_table dipsaus edfReader fst glue ini jsonlite later R_matlab R6 rlang stringr yaml]; }; ravelRy = derive2 { name="ravelRy"; version="0.1.0"; sha256="07mywv57rw2b309i2qisbpx1x3sb3z6n2b5gia9bdmb2m4hhpdai"; depends=[dplyr httr jsonlite purrr tibble tidyr]; }; raven_rdf = derive2 { name="raven.rdf"; version="0.2.0"; sha256="12jy3md6d1qwzkks5iljn4h0iv5lj3n39ll7r3fvrxjwh7afvw7r"; depends=[]; }; raw = derive2 { name="raw"; version="0.1.8"; sha256="1y2vhpgigzkd2xyj3986wlzm1g3pp99w6fspmhlff5czd73g16is"; depends=[]; }; rawKS = derive2 { name="rawKS"; version="0.1.0"; sha256="1yiw9imhgij49qbm9hk6psb73zngqmxxwnaxq144ydwb7fbk6j0z"; depends=[dplyr ggplot2 magrittr ROCR tidyr]; }; - rawr = derive2 { name="rawr"; version="0.1.1"; sha256="0jlmsvz7p1yw8gpfy81b6jkwqyqmaj443xl2cmp4rddiimfcczdi"; depends=[clipr dplyr jsonlite rvest stringr xml2]; }; + rawr = derive2 { name="rawr"; version="0.1.3"; sha256="0k0x1pmxs73j6dmjg33n4hhwjwzpnhzbmmmjza6kw7hj6lfmipx4"; depends=[clipr dplyr jsonlite rvest stringr xml2]; }; raws_profile = derive2 { name="raws.profile"; version="0.1.0"; sha256="04f7wk7x9j3rb6nn3zqss9vw0h9a4vpcjyilc2vqy0fm2by41xkg"; depends=[stringr tibble withr]; }; - rayimage = derive2 { name="rayimage"; version="0.5.1"; sha256="0z5hhfd8nph86581xibnj2caly59ws5ypsw9x5xnznxq27p0vxx1"; depends=[jpeg magrittr png progress Rcpp RcppArmadillo]; }; + rayimage = derive2 { name="rayimage"; version="0.6.2"; sha256="1zhs4whbxvn8gn0ddxpd8qgnv2f75nlvrz6x5y0ac516bgrapz5z"; depends=[jpeg magrittr png progress Rcpp RcppArmadillo]; }; rayrender = derive2 { name="rayrender"; version="0.21.2"; sha256="0s88p9yqm2xxvwpxbnmhs3yay1gd904dgsik9fy6551cym1asl1n"; depends=[assertthat decido magrittr png progress purrr raster rayimage Rcpp RcppThread spacefillr tibble]; }; rayshader = derive2 { name="rayshader"; version="0.24.10"; sha256="1wdqbbk8f0vxha0awgfv4c8n7yndy2k1q6f3rkr3f5j84wwqfjbx"; depends=[doParallel foreach magrittr png progress raster rayimage Rcpp RcppArmadillo rgl scales terrainmeshr]; }; raytracing = derive2 { name="raytracing"; version="0.1.0"; sha256="052j053l4104pk7cbkkqrj3kkiip9lv2lf0xl2xsray62n6p07m4"; depends=[ncdf4 sf units]; }; + rayvertex = derive2 { name="rayvertex"; version="0.2.3"; sha256="1f7b906dnn2w2sljcbsjd83b97k5jwsrwc9zj606a39q5cjnnna8"; depends=[digest magrittr png rayimage Rcpp RcppThread spacefillr]; }; rbace = derive2 { name="rbace"; version="0.2.2"; sha256="04jcbrcp0l1v2q8hhwr5w72spdja8r0fw71v68kx39yigy7m1sgp"; depends=[crul data_table tibble xml2]; }; - rbacon = derive2 { name="rbacon"; version="2.5.3"; sha256="1c6whi8vfhplazqc5zlrzxyr632l496axfpa8a2jp27ndn8d3mcm"; depends=[coda IntCal Rcpp]; }; + rbacon = derive2 { name="rbacon"; version="2.5.7"; sha256="14j84bkgmxigzj5nk909b89ails7mzys8wk92gvcywv2p9yhwk6b"; depends=[coda IntCal Rcpp]; }; rbart = derive2 { name="rbart"; version="1.0"; sha256="1byfm1ycw9nfhdblqklyn8pxn6b9q5fa3inbgfpynqpsid97ig35"; depends=[Rcpp]; }; + rbedrock = derive2 { name="rbedrock"; version="0.1.1"; sha256="0vh6pg1lg2764zjhciswznvq7ccrd71855bmdadlj6cc1gv0fphq"; depends=[bit64 digest dplyr fs magrittr purrr R6 rappdirs readr rlang stringr tibble tidyr vctrs]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; rbenvo = derive2 { name="rbenvo"; version="1.0.5"; sha256="0clg2cxyi60yz2mdp95v0hd5gqhk8h2xgmx68852jcpbjf76xasa"; depends=[dplyr forcats ggplot2 lme4 lubridate magrittr Matrix purrr rlang sf stringr tidyr]; }; rbgm = derive2 { name="rbgm"; version="0.1.0"; sha256="0jw7p6l0il0fz5rq7ra731xzj06aqqvm9s1r0hwa4rd74lkg198n"; depends=[dplyr geosphere raster reproj rlang sfheaders sp]; }; - rbhl = derive2 { name="rbhl"; version="0.9.0"; sha256="0n9jxyrpq1s0yq13ylkhm0qcjlm8b25p19vpxv2s4wxan758zypd"; depends=[crul jsonlite plyr tibble xml2]; }; + rbhl = derive2 { name="rbhl"; version="0.9.2"; sha256="0rs1mmah4yyy5dgz1lvzslm4dk53x0wpiy3742z3hwr8p4agnkqi"; depends=[crul jsonlite plyr tibble xml2]; }; rbi = derive2 { name="rbi"; version="0.10.3"; sha256="09hqv235fry60nqvd1is8n7szkq96w160xpw2pdxqdxvlh52cf2r"; depends=[data_table ncdf4 processx reshape2]; }; rbi_helpers = derive2 { name="rbi.helpers"; version="0.3.2"; sha256="1inbf3kpl4y46m7v36akrr24112y4sd3d8yqia16i32wxf53wql5"; depends=[data_table lubridate Matrix rbi reshape2]; }; - rbibutils = derive2 { name="rbibutils"; version="2.1.1"; sha256="0vk8pc9nsf28jxlb2vv1kydqfnvlh7q4kd2wyva4mwhl51s36bpl"; depends=[]; }; + rbibutils = derive2 { name="rbibutils"; version="2.2.3"; sha256="1rzc2icik26qlnrbq58c24lc9m0grl83p0hyr70whallqfipa174"; depends=[]; }; rbin = derive2 { name="rbin"; version="0.2.0"; sha256="18g6s4m0yc1bzrymk8km553kcwi4vj16b6mxw2lmv48z7243iq87"; depends=[data_table ggplot2]; }; - rbioapi = derive2 { name="rbioapi"; version="0.7.0"; sha256="1j6fnz088xv3wpglnx9yaf65v22m7j3786iv0nx310aq5wsp39qq"; depends=[httr jsonlite]; }; + rbioacc = derive2 { name="rbioacc"; version="1.0.2"; sha256="15244p3k0cmv9fwcffnwzl130wn14l4axkzr29lvic9v4zx28f1q"; depends=[BH GGally ggmcmc ggplot2 loo Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders stringr testthat zoo]; }; + rbioapi = derive2 { name="rbioapi"; version="0.7.4"; sha256="1w3mahdrqk76g5ygyabvb8kypycwp91k5njwsqhzyfgj2yr67qkn"; depends=[httr jsonlite]; }; rbiom = derive2 { name="rbiom"; version="1.0.2"; sha256="0zg1ibxz3h9mmb4s2gwlliahni6dgqqn849pcxcyhpzyc81av85y"; depends=[magrittr openxlsx plyr R_utils Rcpp RcppParallel rjson slam]; }; - rbiorxiv = derive2 { name="rbiorxiv"; version="0.2.1"; sha256="19ld7v9nd0flfgp6y8hbgxab0f2nx1qih8knd6ivg42rnmi10ycj"; depends=[curl httr jsonlite]; }; - rbiouml = derive2 { name="rbiouml"; version="1.10"; sha256="12p6715dji0na80icc5qlfjvlwr5p5h4s4156kpgd5xz0d6rgaxx"; depends=[RCurl RJSONIO]; }; + rbiouml = derive2 { name="rbiouml"; version="1.11"; sha256="1g1q6xc8x8y71ji75c5fl35sxxss964xmhcqlriybb5zc38m1dh0"; depends=[RCurl RJSONIO]; }; rbison = derive2 { name="rbison"; version="1.0.0"; sha256="0g586hsqci4amci10zjq6xpjvxfjr6rv5i63vp85v3z6bkwfamwr"; depends=[crul data_table dplyr ggplot2 jsonlite mapproj plyr sp tibble]; }; rbit = derive2 { name="rbit"; version="1.0.0"; sha256="09ywr711gv0vgfims2vfcxk3rnd0iadzlksil0q9159yarapfc59"; depends=[R6]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rblt = derive2 { name="rblt"; version="0.2.4.5"; sha256="1pfg8sgm532czz3lhpx7dmg5zik3bc0p4vdq9s0qk5zgq7nnm9sj"; depends=[data_table dygraphs hdf5r shiny xts]; }; rbmn = derive2 { name="rbmn"; version="0.9-4"; sha256="039scbjzigj9ks62l8yagfpr3bpslvxg1nqv22pyw8jay8i6993g"; depends=[MASS]; }; - rbokeh = derive2 { name="rbokeh"; version="0.5.1"; sha256="122slyj1a4v7ph1zdcradzkr4hjncg34i2ld82mbk8nf72ra7ss8"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; + rbokeh = derive2 { name="rbokeh"; version="0.5.2"; sha256="1h2fpzqf17pw9d09r1g1iyxsj5qma4fsk8vnar7f1z4fjyypvi6q"; depends=[digest gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; rbridge = derive2 { name="rbridge"; version="1.0.2"; sha256="0m4c61rdrhq1jw3rwq2ld29g5dchbk4sfpnq0wmwbvzhdjq76plc"; depends=[dplyr Matrix Rcpp RcppArmadillo]; }; rbscCI = derive2 { name="rbscCI"; version="0.1.0"; sha256="12r1f4yy5hx0sx1q77yzq3wxhbx8zgj9d1jfpa1hagvwcyd8bdxb"; depends=[BH Rcpp]; }; rbtc = derive2 { name="rbtc"; version="0.1-6"; sha256="1z5p1jn5b0hzwcbdpiwj224h45x01bbsgkskllir5j13l416561p"; depends=[gmp httr openssl rjson]; }; rbtt = derive2 { name="rbtt"; version="0.1.0"; sha256="1gbsb0vmqxcl28c5nn0rz95bxrvl7i0b17lq90cj5ahbk6x9jblz"; depends=[data_table]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; - rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; - rbw = derive2 { name="rbw"; version="0.2.0"; sha256="01y33gbljb6bvbdsr42vgfi75sywhwn313y5jv1y4kkc4iqzag1r"; depends=[rlang]; }; + rbw = derive2 { name="rbw"; version="0.3.0"; sha256="0mxkwxb54n8vmx0z574mc39v53hlcq91nfmyqcdmxlp2jaz20184"; depends=[dplyr rlang]; }; + rcage = derive2 { name="rcage"; version="1.1"; sha256="0k6x543c0v31yx6b7xiyq7pb3a68sxc7ap8l61h3lp840la6gidp"; depends=[ClustGeo ff fields ggplot2 gridExtra LaplacesDemon MASS Matrix pracma raster rgeos rlang sf sp]; }; rcane = derive2 { name="rcane"; version="1.0"; sha256="0p2mgkq6fh0n289n2h19c52lnqxl05wvpmd6nwvgnjqwa4wwpa7r"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; rcarbon = derive2 { name="rcarbon"; version="1.4.2"; sha256="04s1gqrfa5hy93jnqj5sqii49gz7mq7nm23jnd0iwl48f847vka1"; depends=[doSNOW foreach iterators knitr snow sp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; @@ -14140,18 +14730,17 @@ in with self; { rcdk = derive2 { name="rcdk"; version="3.5.0"; sha256="05bz2pnvfci8sd9l4i0jay8rwvfnw87r9xqzvq5306mfbhik20fy"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; rcdklibs = derive2 { name="rcdklibs"; version="2.3"; sha256="16ijvzsc1irpz1z2xd82i2saafsvpn0x5lr54c5gx9bfb35gacyp"; depends=[rJava]; }; rchallenge = derive2 { name="rchallenge"; version="1.3.4"; sha256="0i402p6ccjn10ix5nln30pab5nd78hg5q4ivvgc4i99nx7aq0xpx"; depends=[knitr rmarkdown]; }; - rcheology = derive2 { name="rcheology"; version="4.0.5.0"; sha256="0xnya1505ks6zqmv1szjvy46mga3bilfyj6nkdgjln414lsn9a67"; depends=[]; }; + rcheology = derive2 { name="rcheology"; version="4.1.1.0"; sha256="1rrnzyxy8x8xy63rrpi6jpmfwww131q4naaslyi5kgj7fys5irzz"; depends=[]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rchie = derive2 { name="rchie"; version="1.0.2"; sha256="1m89mwq5f81yr2vc3wvnxkpm04bad11sx5fllcd3yy8ilghmbfp6"; depends=[jsonlite V8]; }; - rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; rcites = derive2 { name="rcites"; version="1.1.0"; sha256="185s26pzgg3y3d890q5mk1rn75yipd6kfgnhbafnqgk7qy09v8lx"; depends=[cli httr jsonlite]; }; rcitoid = derive2 { name="rcitoid"; version="0.1.0"; sha256="11iqdj1q983w28fh17rqvmhs41ks09b24p408nl7hz4iqg9c7lpi"; depends=[crul curl fauxpas jsonlite]; }; rclipboard = derive2 { name="rclipboard"; version="0.1.3"; sha256="087ih0b3bizgknccy7gm47r1v9wjmj2fb8i4bp4rszd2kdcbwh29"; depends=[shiny]; }; rcmdcheck = derive2 { name="rcmdcheck"; version="1.3.3"; sha256="1d4kzgfqy72r6b7bn1j4znyksrycgypx1jjvpv9lrmvn37mpkdhs"; depends=[callr cli crayon desc digest pkgbuild prettyunits R6 rprojroot sessioninfo withr xopen]; }; rco = derive2 { name="rco"; version="1.0.2"; sha256="1ch7ak802ri4jr10jqvhvdi6q9fhyhql15ja395xfv6j81d5cmia"; depends=[]; }; - rcol = derive2 { name="rcol"; version="0.1.0"; sha256="0pnpzyljrks0cfxc5czhyci6gq9685lccvcbxwnwr3dfxypj5cq8"; depends=[crul data_table glue jsonlite tibble]; }; + rcol = derive2 { name="rcol"; version="0.2.0"; sha256="1ypn5fiwhyvfnmjs2davqqhxf5pjg7f0101v40bqrv4jz563h5n1"; depends=[crul data_table glue jsonlite tibble]; }; rcolors = derive2 { name="rcolors"; version="0.1.0"; sha256="19lkwd1wdwq9if957qjgrz9mq6s8x49dig8snivhw9ksffcfy4xp"; depends=[magrittr]; }; - rcompanion = derive2 { name="rcompanion"; version="2.4.0"; sha256="0a8cn766zh6mpiak73zfg5xmiqa7nf8ynmaz24clwqnkk94rprpb"; depends=[boot coin DescTools EMT lmtest multcompView nortest plyr]; }; + rcompanion = derive2 { name="rcompanion"; version="2.4.1"; sha256="047w6m2llw0iybrc4g06mfcryjgg18kf3la4n8sa0014ygbmw3r3"; depends=[boot coin DescTools lmtest multcompView nortest plyr]; }; rcompendium = derive2 { name="rcompendium"; version="0.5.1"; sha256="0zg7051c4wg1jbdf7hshswy53y24x8h8myhshvg9z2pg8mvd8sir"; depends=[clisymbols crayon devtools gert gh gtools rmarkdown rstudioapi stringr usethis xfun]; }; rcoreoa = derive2 { name="rcoreoa"; version="0.4.0"; sha256="0q5dprz0ag04w265bk7isd2lr61nahf223qza47m0izd9nyi9h8a"; depends=[crul hoardr jsonlite pdftools]; }; rcorpora = derive2 { name="rcorpora"; version="2.0.0"; sha256="1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy"; depends=[jsonlite]; }; @@ -14161,163 +14750,173 @@ in with self; { rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; rct3 = derive2 { name="rct3"; version="1.0.4"; sha256="1xm5kni2mnpzby8basmwbm1abg615i4mlf6fn9jr5il94q1bdgly"; depends=[]; }; rcube = derive2 { name="rcube"; version="0.5"; sha256="1162y7fs3fsbb5jj66g9kvxxhggprlifrabqbb9lqm8rrdwhz3r9"; depends=[magrittr]; }; - rdacca_hp = derive2 { name="rdacca.hp"; version="0.5-6"; sha256="1r18bvb66xiylmbb2cbqfhm1m7ifxxpzrpj6zy80raq322xn2pa0"; depends=[ggplot2 vegan]; }; + rdacca_hp = derive2 { name="rdacca.hp"; version="1.0-3"; sha256="10ywxfx0k5gy7b4lrancfl8j1chd6p8ksz7h487z23nysqjkv9m3"; depends=[ggplot2 vegan]; }; + rdaemon = derive2 { name="rdaemon"; version="1.0.6"; sha256="1qr6v7kgk9nd5qp96667x51331xmpp1yz1r190dgd1fqigw735s5"; depends=[base64enc futile_logger Rcpp]; }; rdatacite = derive2 { name="rdatacite"; version="0.5.2"; sha256="07zbxr89fxx9nlp5w7n60rjm3prck08h0fjrq0pnpkbnnkx9cv9a"; depends=[crul jsonlite tibble]; }; rdataretriever = derive2 { name="rdataretriever"; version="3.0.0"; sha256="1a01lrzn7gcxid01r0l8nnbpbryvs07z9nf43l1143w2n9bvgn24"; depends=[reticulate semver]; }; rdbnomics = derive2 { name="rdbnomics"; version="0.6.4"; sha256="1h32wxjykz9y3k48rx31cvy485gsx8ix3194r2zgxlwdza3rl3lb"; depends=[curl data_table jsonlite]; }; rdd = derive2 { name="rdd"; version="0.57"; sha256="1lpkzcjd18x51wzr4d1prdjfsw5978z6zap65psfs02nszy69nqp"; depends=[AER Formula lmtest sandwich]; }; rddensity = derive2 { name="rddensity"; version="2.2"; sha256="00xmdy3885j3j5sh3civlgggscr946gh7ibd6namqhbzhsnpwrd3"; depends=[ggplot2 lpdensity]; }; + rddtools = derive2 { name="rddtools"; version="1.5.0"; sha256="174mm48hr0pnisg6k2jha877fhhhp26nz7kdqaprsaacsad1x255"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd rdrobust rmarkdown sandwich]; }; rde = derive2 { name="rde"; version="0.1.0"; sha256="1zw9gdh90hl0wc5c0xwl5x7566r611wk73sbqdmpzpswjyyl9aqm"; depends=[clipr]; }; - rdecision = derive2 { name="rdecision"; version="1.0.3"; sha256="0dfxlbgmizbnbdwpz9g0gmsydaw8gw8r5l0l0qmplg5a9a02asaw"; depends=[R6 rlang]; }; + rdecision = derive2 { name="rdecision"; version="1.1.0"; sha256="1rj9sw6r6rimzxbyjjczi5znmdkvqb7kkrdsnzz35n8g43s7h2wr"; depends=[R6 rlang]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdflib = derive2 { name="rdflib"; version="0.2.3"; sha256="1hc6a0spmbd42lf7zjkwjv4glagfzsdilv5hm8c76cj36incg6qg"; depends=[dplyr jsonld readr redland stringi tidyr]; }; rdfp = derive2 { name="rdfp"; version="0.1.4"; sha256="1490227hhfjjscfmd8p897v1ijs61pk5sc0a2vr9yjnfmsnxpqrl"; depends=[curl data_table dplyr httr lubridate plyr purrr readr XML xml2]; }; - rdhs = derive2 { name="rdhs"; version="0.7.2"; sha256="0n42mz10d5qnwmbrxsacgy31z14wcbg3dpsvhsc3gnicamz822kz"; depends=[brio digest foreign getPass haven httr iotools jsonlite magrittr qdapRegex R6 rappdirs rgdal storr xml2]; }; + rdhs = derive2 { name="rdhs"; version="0.7.3"; sha256="156jsil81ha61az78w1fi8fzrwhlircidha5x6c29zl0l6m4jzv9"; depends=[brio digest foreign getPass haven httr iotools jsonlite magrittr qdapRegex R6 rappdirs rgdal storr xml2]; }; rdi = derive2 { name="rdi"; version="1.0.0"; sha256="1c49mkxfyxhqz8fc155kgy1k5by0y2c1ahy8k6pn9k8l1j4m4m2q"; depends=[beanplot gplots pdist stringr]; }; rdian = derive2 { name="rdian"; version="0.1.1"; sha256="0i4ljcqhmrwrqbhi321iffypxj4kndx47ssljnixr3fx2lmqh0q1"; depends=[curl httr]; }; rdist = derive2 { name="rdist"; version="0.0.5"; sha256="1jb6dgp1f3307h96v20pjxpkxfz08ij98w0yj5cdx1g2kwfl0h0w"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="2.0"; sha256="1x9500iq9dkqpq79m1fzl2f1c7bbhrq2v0kqz8wx6dd6dlkgkpqn"; depends=[binaryLogic reshape2]; }; - rdlocrand = derive2 { name="rdlocrand"; version="0.7.1"; sha256="0qgah3izq9zcqk945ambfm79n5zxb9p9ykpqnsi68d50xyy1qs8k"; depends=[AER sandwich]; }; - rdmulti = derive2 { name="rdmulti"; version="0.7"; sha256="112wq692drzd7v4nccjqs22rrx0z5032iyccysmq5gvpb7ahc2im"; depends=[ggplot2 rdrobust]; }; + rdlocrand = derive2 { name="rdlocrand"; version="0.9"; sha256="124vyky0sydp15idyzai7j7h77030j062q39v20gzzrzag81pd90"; depends=[AER sandwich]; }; + rdmulti = derive2 { name="rdmulti"; version="0.8"; sha256="0hkcvcndfma9sbw6brmj29ka52kn3axhwk1cix3vw5ganwnmpaqh"; depends=[ggplot2 rdrobust]; }; rdnb = derive2 { name="rdnb"; version="0.1-4"; sha256="069xlfdjjyl4a9clxj8m5gfplmll6qiqzms59mnsql3b74jamxi3"; depends=[brew httr stringr xml2]; }; rdoc = derive2 { name="rdoc"; version="0.1.0"; sha256="0ac6413jyrr7m25z30n3bpiafsvjx38ik6rrjzsiqxrfp41j6l9x"; depends=[cli crayon prettycode R6]; }; - rdomains = derive2 { name="rdomains"; version="0.1.9"; sha256="0pfz438qiz8mqh391nlhz2q2r8830y5i0sg1ajhppj1hq2cgqqbg"; depends=[aws_alexa curl devtools glmnet httr jsonlite Matrix rlang urltools virustotal XML xml2]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpower = derive2 { name="rdpower"; version="2.0"; sha256="1yw563nz7dc24ba7vh0w85gp3rhr2ddx3qkpfdr1iwq8a8g1hg01"; depends=[rdrobust]; }; - rdrobust = derive2 { name="rdrobust"; version="1.0.1"; sha256="0gakdlmqqk9zqyvyyfvwn6xv56hyq44fxayga6kz639r0vznqpsa"; depends=[ggplot2 MASS]; }; + rdrobust = derive2 { name="rdrobust"; version="1.0.6"; sha256="09qffxmihnw7dpdb7x92190drcfgsv66ahwvqxbzy6shqsvs4yhs"; depends=[ggplot2 MASS]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.2.1"; sha256="02rhcq1vn349ddjkqamxb0wjb3z3m4wzkvin1mprcz4fzrjxgbdr"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="1.0.0"; sha256="00f1qwsbwg5jggm5b83nhk1lxyw272rv2kg77bcwqvlf3074c3mz"; depends=[crul curl hoardr jsonlite mime tibble zip]; }; rdtLite = derive2 { name="rdtLite"; version="1.3"; sha256="1njn6x2k03qxmb96d5sl7jz0xq5wabbixn9xy55ypw8g1k0cgmd1"; depends=[curl digest gtools jsonlite knitr provSummarizeR provViz rlang rmarkdown sessioninfo stringi XML]; }; rdwd = derive2 { name="rdwd"; version="1.5.0"; sha256="1x63zarcyc1rapg46h0vlym3v2kbd6ql2vza9jqly371p5g8l1ci"; depends=[berryFunctions pbapply]; }; rdwplus = derive2 { name="rdwplus"; version="0.1.0"; sha256="1y4dnm2bb0w6pim4h79mv2km88s78vhsn5fhs7z45m0564hgk0x2"; depends=[raster rgrass7]; }; - re2 = derive2 { name="re2"; version="0.1.0"; sha256="19nyhs1hx172mgab8dvdb8asryp5qw1qx0khsnwjycyd4skw9mss"; depends=[Rcpp]; }; - reReg = derive2 { name="reReg"; version="1.4.0"; sha256="03i5a4a45a429wdsd69ivi9yww1skwnmazack58q0dfa22hbjq1i"; depends=[BB directlabels ggplot2 MASS nleqslv Rcpp RcppArmadillo reda rootSolve scam SQUAREM survival]; }; + re2 = derive2 { name="re2"; version="0.1.1"; sha256="0hjdm96qgbrb6lvgyadl30af93zvvni0rwqhialj8swp341qlvw2"; depends=[Rcpp]; }; + reReg = derive2 { name="reReg"; version="1.4.1"; sha256="12m64rrj0pjhmwgw88ibnb4x0hnfixfsbzg6yany75048y52anis"; depends=[BB dfoptim directlabels ggplot2 MASS nleqslv optimx Rcpp RcppArmadillo reda rootSolve scam SQUAREM survival]; }; reactR = derive2 { name="reactR"; version="0.4.4"; sha256="15c0ij3xglsdavkpzgnkbyl5yb39jrn6zhlrdjiwp1m9cnrqzf2w"; depends=[htmltools]; }; reactable = derive2 { name="reactable"; version="0.2.3"; sha256="17wl75cblm0rgq3chl96vj7wmbcmszss1zjppfccz1hcimfmlrpx"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; - reactablefmtr = derive2 { name="reactablefmtr"; version="0.2.0"; sha256="017smx2n3r7xkg5gybwbafn0pdzg4c0vv14adk6imyhgmiklnvl0"; depends=[dplyr htmltools reactable shiny stringr]; }; + reactablefmtr = derive2 { name="reactablefmtr"; version="1.0.0"; sha256="0c058ar826zfw7g9vdlgfc9sra3sxp1n6m1ijfgrfm04whk2sz50"; depends=[dplyr htmltools htmlwidgets reactable shiny stringr]; }; reactlog = derive2 { name="reactlog"; version="1.1.0"; sha256="0vngy7fixiighhaa0db8xfr6962jmrfn3675qrn3hj7rfh7siagz"; depends=[jsonlite]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; - read_gb = derive2 { name="read.gb"; version="2.0.1"; sha256="049515v9pyxmarzy51m5wpbxdzp7iq5m5m20ilmywfrig7hz8jpl"; depends=[]; }; + read_gb = derive2 { name="read.gb"; version="2.2"; sha256="1ym285y6ii71lz3c68imvcdpw24jdxbdxzq9ia533dy5himclrg7"; depends=[rentrez]; }; read_gt3x = derive2 { name="read.gt3x"; version="1.0.2"; sha256="0i6z5q7iwai0c21xp9krnsy20vwq3c5d1blfbaqi5qfwassnssad"; depends=[R_utils Rcpp]; }; readABF = derive2 { name="readABF"; version="1.0.2"; sha256="1lyjl3j62nrsml9vmgwbach9qm8mh2d2pxjj8sfbkkw79krvdnsd"; depends=[]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; readHAC = derive2 { name="readHAC"; version="1.0"; sha256="0z80ai6xfswwgdfh83l9sq279c97n0wz25bk2l7xfb6w0sndzq53"; depends=[]; }; - readJDX = derive2 { name="readJDX"; version="0.5.41"; sha256="0cy210sw7y5wvw3fy9m3d6g4vj7gdils6qfdrp2ib2xkqzqxc992"; depends=[stringr]; }; + readJDX = derive2 { name="readJDX"; version="0.6.1"; sha256="19aw7jafgg6d6q5xmsphpkyakad6m1x1062h3nxkmfma9xcy4ns4"; depends=[stringr]; }; readMLData = derive2 { name="readMLData"; version="0.9-7"; sha256="0l752j1jq37j9pdcsbmcb23b5l8fkfsbisfr3yjy3q4rxsphc7k6"; depends=[XML]; }; readMzXmlData = derive2 { name="readMzXmlData"; version="2.8.1"; sha256="03lnhajj75i3imy95n2npr5qpm4birbli922kphj0w3458nq8g8w"; depends=[base64enc digest XML]; }; readODS = derive2 { name="readODS"; version="1.7.0"; sha256="1hi217ab7hp15jsbzi5ak57cqf8jn2rv78bnn74q72gn9mrfra7n"; depends=[cellranger readr stringi xml2]; }; readOffice = derive2 { name="readOffice"; version="0.2.2"; sha256="0dg7fwxdl41nrjqnxvh9rpz0la99iid0wy51gncjwrh3s85fj2ks"; depends=[magrittr purrr rvest xml2]; }; - readabs = derive2 { name="readabs"; version="0.4.8"; sha256="0zvqwjd12b7iz5jldh18lzbrbwsc4is6467jx2xpzi18sd4159kr"; depends=[curl dplyr fst glue httr hutils purrr readxl rlang rsdmx rvest stringi tidyr xml2]; }; + readabs = derive2 { name="readabs"; version="0.4.9"; sha256="0qqfks7ar2zv67rd8ni5dz15a85x82xpjvhw9iazdcfcmp5aj8dl"; depends=[dplyr fst glue httr hutils purrr readxl rlang rvest stringi tidyr xml2]; }; readbitmap = derive2 { name="readbitmap"; version="0.1.5"; sha256="14825906l326w59g6apy00j55jg3h5kx2r6s031f4gdkbrc7szbk"; depends=[bmp jpeg png tiff]; }; readbulk = derive2 { name="readbulk"; version="1.1.3"; sha256="0rqz0r5ygwgfqkzv2130sciz3j2p888c2005wsk1m5403syi78an"; depends=[jsonlite plyr]; }; reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; readit = derive2 { name="readit"; version="1.0.0"; sha256="1sq2spjgdc9rq8cr5i9qjmqd4vcf7cknpx5dndwjdqrv112y8bk9"; depends=[crayon haven jsonlite readr readxl]; }; readmnist = derive2 { name="readmnist"; version="1.0.6"; sha256="0f2kp5r04k47gpvbj8x13c47zsis3bw3y8f5f37sh6jggblqr004"; depends=[]; }; - readobj = derive2 { name="readobj"; version="0.3.2"; sha256="0n25n02f5kn8zv90n2xzdasjnrqisl4n5szb667jw57v40b726cw"; depends=[Rcpp]; }; - readr = derive2 { name="readr"; version="1.4.0"; sha256="1fa67h4l9d30ig460xizgzl115i9pm3bk9dvsbrw6awbmf51ic82"; depends=[BH cli clipr cpp11 crayon hms lifecycle R6 rlang tibble]; }; + readmoRe = derive2 { name="readmoRe"; version="0.2-12"; sha256="18zxhnh8nzh3l5j94mrqf9l94bxvc82nzhl8sx5k9h08gj4f1zfw"; depends=[plyr R_utils readxl xml2]; }; + readobj = derive2 { name="readobj"; version="0.4.1"; sha256="0ga0kk6n98zy8w9wc2fahn15bgsv73n4ncqgqb5ldyr4vjqxr2sr"; depends=[Rcpp]; }; + readr = derive2 { name="readr"; version="2.0.1"; sha256="0cj5k3ykkhixgdsqm1gnmpc0d8z04l3fhvm2dr5xp7cpmhgsrpfr"; depends=[cli clipr cpp11 crayon hms lifecycle R6 rlang tibble tzdb vroom]; }; readrba = derive2 { name="readrba"; version="0.1.1"; sha256="1f12rhvggikrphir0liswvxjbdsg2z0qs91acz0qfrk8fap81ddn"; depends=[dplyr httr lubridate purrr readxl rlang rvest stringr tidyr xml2]; }; readroper = derive2 { name="readroper"; version="0.9.3"; sha256="00l731hryx0igj0x7knljs9xq4gaczmsgw2hh05ngrl9y5s528dc"; depends=[readr]; }; readsdmx = derive2 { name="readsdmx"; version="0.3.0"; sha256="188yzkjblbjly032312w0fazj7k7j4ynqfc69xpblnw4gs708sx0"; depends=[Rcpp]; }; readsdr = derive2 { name="readsdr"; version="0.2.0"; sha256="0s16m1cam69c83k6cdpysdfyqzh0ihyjdwdzv3hqxa9054iv5ifx"; depends=[deSolve dplyr magrittr purrr rlang stringi stringr xml2]; }; - readsparse = derive2 { name="readsparse"; version="0.1.2-1"; sha256="0cqgwz1ark1x20v21sjnwa2w3l2811vi6q0lnc7m7ypqm93vly13"; depends=[Matrix Rcpp]; }; - readstata13 = derive2 { name="readstata13"; version="0.9.2"; sha256="02mqwpzn7n3pqjxivnd1vlfc47xkyiywfz594x0f6vd2dym8rdwd"; depends=[Rcpp]; }; - readtext = derive2 { name="readtext"; version="0.80"; sha256="0q8ajnp99fwvh14ppkm2z3gqwdwmjrvxvsfb4q7ad0dhkqric05y"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; + readsparse = derive2 { name="readsparse"; version="0.1.5"; sha256="0lbrqw5jsmj9bb9hy393xgwxhl8birbga8gi643fi8hyykinfcv9"; depends=[Matrix Rcpp]; }; + readstata13 = derive2 { name="readstata13"; version="0.10.0"; sha256="0b57mfzxsv1hn838kmxpigak060mcjqqx5jxr26ygk27yi96v679"; depends=[Rcpp]; }; + readtext = derive2 { name="readtext"; version="0.81"; sha256="0k782h5hns5v5h8a6qyfqck2hc15nq0awg8bsp196q4zviv5jw3c"; depends=[antiword data_table digest httr jsonlite pdftools readODS readxl streamR stringi striprtf tibble xml2]; }; readtextgrid = derive2 { name="readtextgrid"; version="0.1.1"; sha256="03qrbmlpbjwx4ia0ydv6m9lwzalsas9pdhds82mg5f8ir0cd0qi6"; depends=[magrittr plyr purrr readr stringr tibble]; }; readthat = derive2 { name="readthat"; version="0.0.1"; sha256="04vnpvfa8in3gxi6nv3si59hr8hj17wq3a5n8rnpiaczg46qr1dr"; depends=[curl Rcpp]; }; readwritesqlite = derive2 { name="readwritesqlite"; version="0.1.2"; sha256="1nnakxj4jsh8wcwzciksa2s1pxjwa407lzmjy4fk82f68ir9jh51"; depends=[chk DBI hms lifecycle RSQLite tibble]; }; readxl = derive2 { name="readxl"; version="1.3.1"; sha256="15mambxr8c7k2ikdfsl1w3vxvm54dsnk0cl1qvks6iig7rql3d14"; depends=[cellranger progress Rcpp tibble]; }; readxlsb = derive2 { name="readxlsb"; version="0.1.4"; sha256="1qnfijspx8zwsmr1i6qb7vgaxazmvshq5mcxn79y0r2spszq419i"; depends=[cellranger Rcpp xml2]; }; + realtest = derive2 { name="realtest"; version="0.2.1"; sha256="0868ng2vg91c3wsx6c13k7cii2519k1algs8a6pgf4r01jvja5pz"; depends=[]; }; rearrr = derive2 { name="rearrr"; version="0.2.0"; sha256="0vgwmapngfibdfc0xyg93q63iijicay8yfvp3fi0yqjdzr4as1lq"; depends=[checkmate dplyr lifecycle plyr purrr rlang tibble]; }; reasonabletools = derive2 { name="reasonabletools"; version="0.1"; sha256="08i7wy4jic5v9ka7j716lj6p9r55sv46sqrxsy7ad6sgjvrzn0ss"; depends=[]; }; - rebird = derive2 { name="rebird"; version="1.2.0"; sha256="0ldjai47ps3wnsd9smcnnabh8fd0abm65k952s9i9s445pwkrcqc"; depends=[assertthat dplyr httr jsonlite]; }; - rebmix = derive2 { name="rebmix"; version="2.12.0"; sha256="173b11183hlpazzs70c3zzsg3qakswkvhq63d2bihmy2qbn680zz"; depends=[mvtnorm]; }; + rebird = derive2 { name="rebird"; version="1.3.0"; sha256="1lsmrkp5zfwr9jr26bzw2mk2z4261ylz7qclb0a4j0ma8vrd6f5j"; depends=[assertthat dplyr httr jsonlite]; }; + rebmix = derive2 { name="rebmix"; version="2.13.1"; sha256="1d5s8npnpj7014b6qbin2scvabnx3xmdbi8pg7wqj80mqi02qzrb"; depends=[]; }; rebus = derive2 { name="rebus"; version="0.1-3"; sha256="0ms3dm6g0fq3jycpgjl7q7kyljxc97cczy2jj0lyviwmipdgjg9d"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; rebus_base = derive2 { name="rebus.base"; version="0.0-3"; sha256="1n2khszcya9k6379bdkq47xi2nw9jngiwj7z8a14wfswqydczv6y"; depends=[]; }; rebus_datetimes = derive2 { name="rebus.datetimes"; version="0.0-1"; sha256="09lv41mywm13avxb0xp8x1a2xz50zxazh3lpg27m16d4cgijmhm5"; depends=[rebus_base]; }; rebus_numbers = derive2 { name="rebus.numbers"; version="0.0-1"; sha256="0drgszz0824j49c6jk9ry0cfjky7g843ldlxrx3g2vjp0v7hznj3"; depends=[rebus_base]; }; rebus_unicode = derive2 { name="rebus.unicode"; version="0.0-2"; sha256="185313wh4zpp6addfdr78pjhxzazlfwgsddwk02zrzblf4iwzjdm"; depends=[rebus_base]; }; - recapr = derive2 { name="recapr"; version="0.4.3"; sha256="1ypmjm92mzcmn29cl4zhp1vrgan6sdqqsl3x6dbr4nypfd1dx4f9"; depends=[MASS]; }; + recapr = derive2 { name="recapr"; version="0.4.4"; sha256="1grp8aczn3qjm8ihn2466v5yay60vwyf1x7jsmihgxlvgwki6dh7"; depends=[MASS]; }; recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; recipes = derive2 { name="recipes"; version="0.1.16"; sha256="1mayfdbn6q775d4gbdjrrhdbmpsxga57kwh0h7bwv8rk0vmvik23"; depends=[dplyr ellipsis generics glue gower ipred lifecycle lubridate magrittr Matrix purrr rlang tibble tidyr tidyselect timeDate withr]; }; reclin = derive2 { name="reclin"; version="0.1.1"; sha256="15qrdgjmclffivnljgmmipws9ks41fj4q40wnq0fk14mbv2045g2"; depends=[dplyr ldat lpSolve lvec Rcpp stringdist]; }; recluster = derive2 { name="recluster"; version="2.9"; sha256="1nz5w4v5hhb3qjwxixc526gqsmr1imw582l9gj2acwar4z9mixjp"; depends=[ape cluster phangorn phytools picante plotrix vegan]; }; - recmap = derive2 { name="recmap"; version="1.0.7"; sha256="14mqc6kzwhcsbnkpl4hy2592rxgwpcpxwawq4x0kakbdjcskbfv8"; depends=[GA Rcpp sp]; }; + recmap = derive2 { name="recmap"; version="1.0.11"; sha256="08gbbgm6494s490lw9c85j1bvmd6wnk9r43dh8x4lijb3fhs0dq0"; depends=[GA Rcpp sp]; }; + recodeflow = derive2 { name="recodeflow"; version="0.1.0"; sha256="0qi5y1rbdw6dcvkl8gw9fh7rcb0f6ckig8464sgxslgf7cdk2gcz"; depends=[dplyr haven magrittr sjlabelled stringr tidyr XML]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; + recogito = derive2 { name="recogito"; version="0.1.1"; sha256="0y13l3nvr9vag3n109cynms6d0m5sqbivyr422b2pbb2mzv9qjsj"; depends=[htmltools htmlwidgets jsonlite]; }; + recom = derive2 { name="recom"; version="1.0"; sha256="13g8wq4qaa850r7q09cr9x0brxki98h86cq83573jcv4lh3r97yq"; depends=[Rcpp]; }; recombinator = derive2 { name="recombinator"; version="1.0.1"; sha256="1dbsqig2jjp3zypcqxf9c2brb09pv6xikmh6fhz5vgxy5wkyivks"; depends=[crayon]; }; + recometrics = derive2 { name="recometrics"; version="0.1.5"; sha256="1gbz1yf7lnkakq9xiyvnz5hzpkxladfk1bj6mr90jiinxlg0ibbw"; depends=[float Matrix MatrixExtra Rcpp RhpcBLASctl]; }; recommenderlab = derive2 { name="recommenderlab"; version="0.2-7"; sha256="016wgzf7hl0kw9qdwc8jwbnq4pkjkid33whh42h10hq8zqsbnivk"; depends=[arules irlba Matrix proxy recosystem registry]; }; recommenderlabBX = derive2 { name="recommenderlabBX"; version="0.1-1"; sha256="042yh0h8qxj7n9hysrfdxnpb3g0zb6s5b683s7hn5mjc55q7nn4g"; depends=[recommenderlab]; }; recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; }; reconstructKM = derive2 { name="reconstructKM"; version="0.3.0"; sha256="0fxdmvkm68g114nx2r2r8gy2lwqc5wkfcls7fpdfdfg0aazqqxwq"; depends=[dplyr magrittr rlang survival survminer]; }; reconstructr = derive2 { name="reconstructr"; version="2.0.2"; sha256="0pzpd2l1b6y1b1lnd95lpc5s8niz7p56vkmxgyi6g6b25vh9c2vi"; depends=[openssl Rcpp]; }; recorder = derive2 { name="recorder"; version="0.8.2"; sha256="1j3fqqp5vi8z3hxqgb887v9r8x0cl5jikiyx3c7arwna7k89215a"; depends=[crayon data_table]; }; - recosystem = derive2 { name="recosystem"; version="0.4.4"; sha256="0jnq6y5cgfgjvni70ms68z7lfa296jahk4zzby2d69v5ir7vy6xg"; depends=[Rcpp RcppProgress]; }; + recosystem = derive2 { name="recosystem"; version="0.5"; sha256="0xpkq500cbq6vzgwq5scq8bj33nrjj94n39zza2cm1fnars6msjq"; depends=[float Rcpp RcppProgress]; }; recurse = derive2 { name="recurse"; version="1.1.2"; sha256="0bdm2nd8cq64dwz9b2hnbjv6c3fwpy7gnmbfi6p49nf285p8y632"; depends=[Rcpp]; }; red = derive2 { name="red"; version="1.5.0"; sha256="0hsmzw3cc3kkiaqhbn0p2fm6biqq0ka9rmv6gcv74nxjzlvl6vvp"; depends=[BAT dismo gdistance geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.1"; sha256="0bd1jzjip6p449m9ysi4kybxqljh2wj8z9mrgyk1cy08bjivd1cd"; depends=[imager]; }; reda = derive2 { name="reda"; version="0.5.3"; sha256="0mns6bnbzngbhsjcyfb2xgia1747axdz4pf7nkpkmxrchijv2q5h"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; redcapAPI = derive2 { name="redcapAPI"; version="2.3"; sha256="1myycwdrlw1405fxc82zd8ps8bhdvf2ffsb91pia5ijf6952v8pf"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; + redist = derive2 { name="redist"; version="3.1.4"; sha256="0xh1qm99kazv57bwj9kxg33n68vrclvqazfsx5v9dx0k77m0g6kq"; depends=[coda doParallel dplyr foreach ggplot2 patchwork Rcpp RcppArmadillo readr rlang servr sf stringr sys tidyselect vctrs]; }; redland = derive2 { name="redland"; version="1.0.17-14"; sha256="1fd79clxkn85ywvdsyy0j6mw057ir9202qw2962j8iqbvqai99qk"; depends=[roxygen2]; }; redlistr = derive2 { name="redlistr"; version="1.0.3"; sha256="003jxfmj1gryw77vnrvaxmpvjbshlq53wgcrj02mcywfcqzg4jcr"; depends=[plyr raster rgeos sp]; }; redoc = derive2 { name="redoc"; version="2.0.0.49"; sha256="06nfqw6xs0ij21mjbqk9sdvhhh0pqf6fwankvagsbyrv742g7qkx"; depends=[jsonlite]; }; redux = derive2 { name="redux"; version="1.1.0"; sha256="0a551w7fph338mqzxda6y21lsad19dway7w18jw9cv1rgvcp9nvc"; depends=[R6 storr]; }; ref_ICAR = derive2 { name="ref.ICAR"; version="1.0"; sha256="0k6czsbjclgmi7vp5hl50jghkzm573s50993iz3dcv55mv662251"; depends=[coda MCMCglmm mvtnorm Rdpack rgdal spdep]; }; referenceIntervals = derive2 { name="referenceIntervals"; version="1.2.0"; sha256="0wf8c71z7gq2f91q60dyy7mrxsnhq7x3wdllmzn2lpabgv2wrm85"; depends=[boot car extremevalues outliers]; }; + refineR = derive2 { name="refineR"; version="1.0.0"; sha256="13bxi1fp0517lvwdwdjc8vm7sr38kwjk6d17qra0is1mlac4wyj3"; depends=[ash future future_apply]; }; refinr = derive2 { name="refinr"; version="0.3.1"; sha256="0q76sr050pg3ahwzcxj08mjig0k2jq8yh7nv6d914pwg3dhq05sn"; depends=[Rcpp stringdist stringi]; }; - refitME = derive2 { name="refitME"; version="1.2.0"; sha256="062dgdzxjlbq9dcyks3pp5xnwp9pwk9zgd52ldjcnjllp29wzcaw"; depends=[caret dplyr expm MASS mgcv mvtnorm sandwich SemiPar VGAM VGAMdata]; }; + refitME = derive2 { name="refitME"; version="1.2.2"; sha256="125hxp24vlwg3g0v1rlhi3zbvnnzyj95a6d9f52f98hf6bp05yhb"; depends=[caret dplyr expm MASS mgcv mvtnorm sandwich scales SemiPar VGAM VGAMdata]; }; refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; + refreg = derive2 { name="refreg"; version="0.1.0"; sha256="0fgf99a9xki9x0kjrhi7lyr1f4gpfl52xis058fd70y4pj1zz37l"; depends=[doParallel foreach ggplot2 gridExtra KernSmooth ks matrixcalc mbend mgcv misc3d pracma RColorBrewer rgl sp stringr]; }; refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; }; refuge = derive2 { name="refuge"; version="0.3.3"; sha256="0cq62rgawlam4j4h4sz4zvkgi0x21k4syy4vh7i40bxrq0z9ysyz"; depends=[dplyr httr jsonlite tibble]; }; - refund = derive2 { name="refund"; version="0.1-23"; sha256="1vax9dqaypjs7hdbdwadr7i275wqij115fdv81cjz3rfm8s9qiks"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; + refund = derive2 { name="refund"; version="0.1-24"; sha256="089dl0vjn474gka9j18fk125aqvwd2gx61g1rv8cp6m0caq99pzg"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; + regDIF = derive2 { name="regDIF"; version="1.0.0"; sha256="1gw4ymg6qk1v4nkayqw706f2la0yfkwvdjlam4wc00mnjjbxgnyd"; depends=[statmod]; }; regRSM = derive2 { name="regRSM"; version="0.5"; sha256="0nbp3yjk9r7qvwm7wla39155rmqnvpdb720iq3b0hcy1bbsxbk9s"; depends=[doParallel foreach Rmpi]; }; regclass = derive2 { name="regclass"; version="1.6"; sha256="0m974k3yhf0dgv5f1qjs8c53mam0cll3cjn35ywfrmlfla0wlhf5"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; regexPipes = derive2 { name="regexPipes"; version="0.0.1"; sha256="1hk0rhvmgzcyf5cyl8hjznl3ll25kpasqikfr6nxd6ian2slvmmb"; depends=[]; }; regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; }; regexTestR = derive2 { name="regexTestR"; version="0.1.0"; sha256="1nfzzifqvhz3cjdr93pd4iyz5hb8v42v94r89b2ikc8ycc48k75g"; depends=[config data_table DT golem htmltools pkgload processx purrr RColorBrewer rvest shiny shinyBS shinythemes stringr tidyr xml2]; }; reghelper = derive2 { name="reghelper"; version="1.0.2"; sha256="1ya15ksn30ad6lx10xr9vhncvm72j5qz82hwg6avdm8h6xi16bqp"; depends=[ggplot2 lme4 nlme]; }; - regioncode = derive2 { name="regioncode"; version="0.1.0"; sha256="1yq3z02m5wzb7sp176vm60xzh8j2hg64qfwm6k48rwmby9cggwyk"; depends=[dplyr knitr textshaping]; }; - regions = derive2 { name="regions"; version="0.1.5"; sha256="007pgqyphl5nq0ym1bgz89li2pnps2kcfn7h8jkvpi36pmig5zpn"; depends=[countrycode dplyr glue magrittr purrr readxl rlang stringr testthat tidyr tidyselect]; }; + regioncode = derive2 { name="regioncode"; version="0.1.1"; sha256="1h5qbpcfgl86g0cy5nz9vvwzqsp335lqhl4djil3k3mab38k778d"; depends=[dplyr knitr pinyin textshaping]; }; + regions = derive2 { name="regions"; version="0.1.8"; sha256="16i0w1my9zfwh0p9qvc3vcid0r6rb6gbvvrx03vbg81l6cxrglr4"; depends=[assertthat countrycode dplyr glue here magrittr purrr readxl rlang stringr tibble tidyr tidyselect]; }; registr = derive2 { name="registr"; version="1.0.0"; sha256="1ysj2ab69w6g71d1kpcwyq0py71w6h7lfhk4nzgn2dhh6k8whwbn"; depends=[dplyr ggplot2 gridExtra magrittr Rcpp RcppArmadillo tidyr]; }; registry = derive2 { name="registry"; version="0.5-1"; sha256="1k3j6dx350awamr0dwwgkhfs46vsnj4nf08iw5byq0x7n3nkdsnz"; depends=[]; }; reglogit = derive2 { name="reglogit"; version="1.2-6"; sha256="1nnn8n5sqhbd3nzmwnpmcsmaxxxaqwbna7xm7q9vk4cqz9cm9b9s"; depends=[boot Matrix mvtnorm]; }; regmed = derive2 { name="regmed"; version="2.0.4"; sha256="19cc0nx4463jny9cw5smb95crb3makspysfx06h82amhyqjyzw60"; depends=[glasso igraph knitr lavaan Rcpp RcppArmadillo]; }; - regmedint = derive2 { name="regmedint"; version="0.2.0"; sha256="1l9f6biqjc59lpcvmmvg5rikcqs0liaj0y3ivqgv3wldq0yzl5pg"; depends=[assertthat Deriv MASS Matrix sandwich survival]; }; + regmedint = derive2 { name="regmedint"; version="0.2.1"; sha256="0z6yq0r0mq028z09zayfmsyyjjcnh9cg75xwckcxk0xbgs1qk1yx"; depends=[assertthat Deriv MASS Matrix sandwich survival]; }; regnet = derive2 { name="regnet"; version="0.4.0"; sha256="0qb7sp464fyxn0bslkapjni3pzk7l6fdgabfbzja08flsr63r4mh"; depends=[glmnet Rcpp RcppArmadillo]; }; regplot = derive2 { name="regplot"; version="1.1"; sha256="048w0hnd2y8k27msjhw2g4ygck6i09698qk24sz7563z82gvj52w"; depends=[beanplot lme4 sm survival vioplot]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; regrap = derive2 { name="regrap"; version="1.0.1"; sha256="0yrxhlam7jmxwk1v53kllv6ja1m938symfvqp84xb278r3wb1wv7"; depends=[mvtnorm]; }; regress = derive2 { name="regress"; version="1.3-21"; sha256="0mkf1dyg0r09ifdvmc3g6b0q0h819j0kfh1cb33r1vsr8yfjvgbz"; depends=[]; }; - regressoR = derive2 { name="regressoR"; version="1.2.1"; sha256="0mqwk2jsnmgjqrq37zj5491pa6in4rys347fj1d4pf844vvwyylc"; depends=[corrplot dplyr e1071 flexdashboard forcats gbm ggplot2 glmnet htmltools kknn neuralnet rattle rpart rpart_plot shiny shinyAce shinydashboardPlus shinyWidgets stringr xtable]; }; - regrrr = derive2 { name="regrrr"; version="0.1.1"; sha256="1ibmfxw0akkrz4r0fipfqbbw4153cghj8k2xsy73lgw799ybylfk"; depends=[dplyr ggplot2 lspline magrittr MuMIn purrr robustbase scales stringr tidyr usdm]; }; - regsem = derive2 { name="regsem"; version="1.6.2"; sha256="14nrzyrkrijdrr4jwkri5zra2wh36w68wy6xs600l2z1633h2lmn"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; + regressoR = derive2 { name="regressoR"; version="2.0.0"; sha256="0xjy937pqh3digcw4wwv3w0z7l23843729k3wwbwsv0ykgskjp05"; depends=[DT e1071 echarts4r gbm glmnet golem htmltools kknn neuralnet pls randomForest rlang rpart rpart_plot shiny shinyAce shinycustomloader shinydashboard shinydashboardPlus shinyjs]; }; + regrrr = derive2 { name="regrrr"; version="0.1.3"; sha256="1ih27mgqfzjlas97rvj18s8j3p0bpwb03vr71yrq776vzv1v6fcs"; depends=[dplyr ggplot2 lspline magrittr MuMIn purrr robustbase scales stringr tidyr usdm]; }; + regsem = derive2 { name="regsem"; version="1.8.0"; sha256="1v33wkrsawcvaa06cijp8ybwi82a0x34y59hdknwdbywplnirzr8"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; regtomean = derive2 { name="regtomean"; version="1.0"; sha256="1w5i75iwwc2w2nzw9yap86njhq9jz0pc9cn39ivxdam4a9693jjz"; depends=[effsize formattable mefa plotrix plyr sjlabelled sjmisc sjPlot]; }; regtools = derive2 { name="regtools"; version="1.1.0"; sha256="1kia4h4bwjjfq7jm57ihdgspbqfn683ssbzngp5r069ki931h3nb"; depends=[dummies FNN mvtnorm sandwich]; }; - rehh = derive2 { name="rehh"; version="3.2.1"; sha256="10187p0qyqxplj5kh1ngnc56ajhfl2fgszs9qghfc43f7m00qwsh"; depends=[rehh_data]; }; + rehh = derive2 { name="rehh"; version="3.2.2"; sha256="1kgabmg0vq8psdhkfcpdv3iy8gj5hmqzhb8bs8rld49nhnnbqs2x"; depends=[rehh_data]; }; rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; rehydratoR = derive2 { name="rehydratoR"; version="0.5.2"; sha256="1d94m9hv1l72l9lph2vzbq4qqbfcgyhv2qk82p9vb8l2ckavjzvv"; depends=[dplyr jsonlite rtweet tibble]; }; reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; reinsureR = derive2 { name="reinsureR"; version="0.1.0"; sha256="19ayikzcq6z4i7xrlby76yy2nwvrsv6xdfrmvzyr7rz934flh8kd"; depends=[data_table dplyr ggplot2 viridis viridisLite]; }; - rel = derive2 { name="rel"; version="1.4.2"; sha256="0h0146b8pnd7ai17y58agsk9kaym7fhiagl34gggaak0j1qa32wh"; depends=[]; }; relMix = derive2 { name="relMix"; version="1.3.3"; sha256="03zzmsx2i7ib1mhdfk5igvr1winl9g2dfjqz2kzvcx3rl7l6hjym"; depends=[Familias gWidgets2 gWidgets2tcltk]; }; relSim = derive2 { name="relSim"; version="0.3-1"; sha256="1d6yihapfyjlfw87l370wyfyby7ivvykx04qljffdv3hi801gn7f"; depends=[multicool Rcpp rvest stringr xml2 xtable]; }; rela = derive2 { name="rela"; version="4.1"; sha256="00ksm7zh1mpd2d5c5d823id3sxj0h3x0ccg6a40fadibvr1ay3ny"; depends=[]; }; - relabeLoadings = derive2 { name="relabeLoadings"; version="1.0"; sha256="16gxdrhkaaa33hypnsacn4vd1g3lbqdl3j8p8va54v777c561g81"; depends=[]; }; - relaimpo = derive2 { name="relaimpo"; version="2.2-3"; sha256="0pbffalyhmfigyynkl6il60dyyf2aw1i71sncwrqcp18qgx4bxq9"; depends=[boot corpcor MASS mitools survey]; }; + relaimpo = derive2 { name="relaimpo"; version="2.2-5"; sha256="0v6yb7ridf66msd3iyjin5nrwjjrjjxmd1v82fxlqfsmmipjzlbz"; depends=[boot corpcor MASS mitools survey]; }; relatable = derive2 { name="relatable"; version="1.0.0"; sha256="0147gin6dn76gg7gassar64f0w2gny1sh0k60v7914qhb4sj4s7i"; depends=[compare]; }; relations = derive2 { name="relations"; version="0.6-9"; sha256="0vq4wawj9k3a9n70i7y6c7k2jylmyczsi6iqssydn5z5h48m15fj"; depends=[cluster sets slam]; }; relaxo = derive2 { name="relaxo"; version="0.1-2"; sha256="1rzmq7q3j271s6qwwrmwidv0vxcjpgjhyiqgr6fkczkai2lbnd8x"; depends=[lars]; }; reldist = derive2 { name="reldist"; version="1.6-6"; sha256="09vips7spcz0fahrpy0bl15hk43zgnq74h189hmygyi41l95aywa"; depends=[Hmisc mgcv]; }; relen = derive2 { name="relen"; version="1.0.1"; sha256="0br7c3j30a1yc61pyinmk5lvk8zw9rivd0z2096g6crgmbzix8ml"; depends=[]; }; - relevance = derive2 { name="relevance"; version="1.1"; sha256="05s6dpi5f9gdds0lk16i67cd6sahi7p2k2xcp9916r3wdqmsp29d"; depends=[]; }; - relevent = derive2 { name="relevent"; version="1.0-4"; sha256="10bf1s7jmas8ck1izqibqcaqg4z55ciwdpd9pm2697y8z0jhr2rj"; depends=[coda sna trust]; }; + relevance = derive2 { name="relevance"; version="1.3"; sha256="185fb5vjq1l6q1yz4qyvm2qli1xpp3wc4d1s17y28daljmdijlw8"; depends=[]; }; + relevent = derive2 { name="relevent"; version="1.1"; sha256="10wy6qbg91bq8cs5fas50nnfw80rpsgr8bqpfbsxcmsh43ilpgg9"; depends=[coda sna trust]; }; relgam = derive2 { name="relgam"; version="1.0"; sha256="0bfsk2pc3vdk8wgdfpz80x0f9p0z37sq114swqn6z11p298hwf2x"; depends=[foreach glmnet]; }; reliaR = derive2 { name="reliaR"; version="0.01"; sha256="000nafjp386nzd0n57hshmjzippiha6s6c4nfrcwl059dzmi088i"; depends=[]; }; reliabilitydiag = derive2 { name="reliabilitydiag"; version="0.1.3"; sha256="06g2p7a47yc8kcd3g2jg08jf9x3xa0byp56w7jgfknv80m4d9mk0"; depends=[bde dplyr ggExtra ggplot2 magrittr purrr rlang tibble tidyr vctrs]; }; relimp = derive2 { name="relimp"; version="1.0-5"; sha256="0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c"; depends=[]; }; - relsurv = derive2 { name="relsurv"; version="2.2-3"; sha256="0jiky939n8vi44n8xg9kag67xjvf1dpywyjrn4bpdfrvfmkrr0l9"; depends=[date survival]; }; + relliptical = derive2 { name="relliptical"; version="0.1.0"; sha256="122gv5pckx87hsczfqsac6nwh54a6y1ka066aab2zlrhrlx0wx2y"; depends=[FuzzyNumbers_Ext_2 matrixcalc Rcpp RcppArmadillo RcppEigen RcppNumerical Rdpack Ryacas0]; }; + relsurv = derive2 { name="relsurv"; version="2.2-5"; sha256="0bqmr493jdk3vkw386gs2bk688bja5yg14ax1rb88bf6i6fqqcy8"; depends=[date survival]; }; rem = derive2 { name="rem"; version="1.3.1"; sha256="1q4p26irhhl1lvc0ydv9wmng1y635zm16szpl7gwq1kyn2p90rai"; depends=[doParallel foreach Rcpp]; }; remap = derive2 { name="remap"; version="0.2.1"; sha256="0fvi0scrjcghkfamdilfyqqn0v9zlgpjdkqwk4ylhpb85x5pv534"; depends=[sf units]; }; rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; @@ -14326,76 +14925,83 @@ in with self; { remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; }; remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; - remotes = derive2 { name="remotes"; version="2.3.0"; sha256="0f35648bdxhvplcfj80r4hfj5w21f1s01kcz6b29d098c1mnfzb7"; depends=[]; }; + remotes = derive2 { name="remotes"; version="2.4.0"; sha256="048lihmwksl72fg4fdmhihblj9ipxl22x9wfpgwsbsv79zjc7rfd"; depends=[]; }; remss = derive2 { name="remss"; version="1.0.1"; sha256="15s3qvcfyp1880ddzpvgiw3q5av21052iy1vnpw0hib5pb7xfkfb"; depends=[survival]; }; renpow = derive2 { name="renpow"; version="0.1-1"; sha256="0kbfpzr17fvf5zzxpzdhvfmrqmlkba2w3rzxl5q5ac1w3h75gfhc"; depends=[]; }; rentrez = derive2 { name="rentrez"; version="1.2.3"; sha256="0x1g2f6hvkqqlb39z8m5qxhcvsizddic5i7rpqw0wy77xfbna9gv"; depends=[httr jsonlite XML]; }; - renv = derive2 { name="renv"; version="0.13.2"; sha256="0jlsf6vfvqhr4i35xy3xf1ixkfillivzy3wbpl6ca9vyjpnhiwj1"; depends=[]; }; + renv = derive2 { name="renv"; version="0.14.0"; sha256="194hcxikdnna526bvyz9y60ccmmm9fib5g0w9dqivrg0fld23lyh"; depends=[]; }; + repana = derive2 { name="repana"; version="1.23.2"; sha256="1wic76sln37qjdrviaz689c5gjf4pc3ffdgvzcvjh0kjvl7d8jfh"; depends=[config DBI dplyr lubridate magrittr openxlsx pool processx readr rmarkdown rstudioapi]; }; repeated = derive2 { name="repeated"; version="1.1.2"; sha256="19kcsj96i1zpnwfan3gz5vrzc2gqlah0wrdr9vb4vvacz45wcdfq"; depends=[rmutil]; }; repec = derive2 { name="repec"; version="0.1.0"; sha256="0alr9fbmfxmnnnn1qymy65crcycynwz435jj0vangbb4p0qhv8pm"; depends=[jsonlite]; }; repello = derive2 { name="repello"; version="1.0.1"; sha256="118m0vybgf5ys856zivn7gvjxqq163gkrhrpyl1avylib4bp3mcq"; depends=[dplyr httr stringr]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; - replicateBE = derive2 { name="replicateBE"; version="1.0.15"; sha256="0al23s1mb3l7z3jypan3v34bs09hlspjxwb672na6p60nmz2mfm5"; depends=[lmerTest nlme pbkrtest PowerTOST readxl]; }; + replacer = derive2 { name="replacer"; version="1.0.1"; sha256="1y5f61r0rc4snpv8sjh4g5gc0f7rik5wdnh92sakafwiisjssmc1"; depends=[data_table]; }; + replicateBE = derive2 { name="replicateBE"; version="1.1.0"; sha256="0ix6qmgyh4j9klhmb7dqj5zwb42y2grlqxijv72lmkbyl59yqqqw"; depends=[lmerTest nlme pbkrtest PowerTOST readxl]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-3"; sha256="1h680xn403fm98ywyxqwhq7llsaghgd4ffjq7r5bdb1r9ahvxrv0"; depends=[spatstat spatstat_core spatstat_geom spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; repmod = derive2 { name="repmod"; version="0.1.7"; sha256="1rpmvxfw2m3bisi5g90sdfm8wmwg2gv9rzblq9kl70kvrs8pj1qs"; depends=[boot flextable lme4 lmerTest officer xtable]; }; repo = derive2 { name="repo"; version="2.1.5"; sha256="13gdka37kbs4mp16pf65bh28f0dkyalrcrdik6lc67jw8r9h94f9"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; - report = derive2 { name="report"; version="0.3.0"; sha256="0pw2rrhvwbgsg91vq9wffdyhlkzcbg2c2ggbjzy2hpb6igir5fzh"; depends=[bayestestR effectsize insight parameters performance]; }; + report = derive2 { name="report"; version="0.3.5"; sha256="0w4d418xmw4zcvvik8qyzl5xgdv7jya04rpmrp4xpa7fx58jkpw4"; depends=[bayestestR effectsize insight parameters performance]; }; reportROC = derive2 { name="reportROC"; version="3.5"; sha256="1f3vdxz45bhks1pm3b41pmh8g8vr2czfr1pn4ddy4kgw5h1x3n8n"; depends=[pROC]; }; reportReg = derive2 { name="reportReg"; version="0.3.0"; sha256="0qwrpn61x69hmgln5fpc58dqfa3pba0lgjjyj0f3fh96wc9jyhq1"; depends=[nlme]; }; - reporter = derive2 { name="reporter"; version="1.1.2"; sha256="0aablfp4r9452aigkldg439ln0g69k3awm76h7llkqq990cc7zcx"; depends=[crayon fmtr stringi]; }; - reportfactory = derive2 { name="reportfactory"; version="0.3.0"; sha256="1xyfvbzfiqp91z4rxhys511h07dk20b1hla1n5fv1ygy50g8nwm6"; depends=[callr checkpoint fs rmarkdown rprojroot rstudioapi yaml]; }; + reporter = derive2 { name="reporter"; version="1.1.6"; sha256="1g9pwpxn0xdhc8zq87ny55jniasdg8vm26ynpm9wmgzqmil8chlg"; depends=[crayon fmtr jpeg stringi]; }; + reportfactory = derive2 { name="reportfactory"; version="0.4.0"; sha256="0mkk9gyd3l6m33mkc6w3fmgrzc6na03kwxxwgn0zb83bjpmyyl1z"; depends=[callr fs knitr rmarkdown rprojroot rstudioapi yaml]; }; reportr = derive2 { name="reportr"; version="1.3.0"; sha256="0zynplxqvbmf23cm2rsz3wz2jx6mv55z94mn1k44ny3lx625cnpw"; depends=[ore]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; repr = derive2 { name="repr"; version="1.1.3"; sha256="0qimllv9pn8wsl550bjkp5dkknbmr69j85mrwfbbq75m2ga466sk"; depends=[base64enc htmltools jsonlite pillar]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; - representr = derive2 { name="representr"; version="0.1.1"; sha256="0ni8kw6bklphflrnynmsbjzx2zr4nc20qqhiivn7dyny95ij2m85"; depends=[doParallel dplyr foreach]; }; + representr = derive2 { name="representr"; version="0.1.2"; sha256="1l3fy3kymzlcw1xckhnr863pi5j0zvy8bc16h0jw7xgj8zsw00zc"; depends=[doParallel dplyr foreach]; }; represtools = derive2 { name="represtools"; version="0.1.3"; sha256="00hnvzkkcl9d3k115i5l9gs0wah5d11amn7q62m1j158lkqlcfza"; depends=[whisker]; }; - reprex = derive2 { name="reprex"; version="2.0.0"; sha256="1lcnxczy28n4g3rvph09va7svcznfyqa7zdggklqb924qvy7flwh"; depends=[callr cli clipr fs glue knitr rlang rmarkdown rstudioapi withr]; }; + reprex = derive2 { name="reprex"; version="2.0.1"; sha256="09k4rasp7mz6n796dsklcbc5l7prljiznrm7fra16qybr9kqcv8f"; depends=[callr cli clipr fs glue knitr rlang rmarkdown rstudioapi withr]; }; reproducer = derive2 { name="reproducer"; version="0.4.2"; sha256="0ip7zh8jnjdwl0lawh60v1rcl0dvrxb6dbrlldb6l1vzbn530him"; depends=[dplyr GetoptLong ggplot2 gridExtra httr jsonlite lme4 MASS metafor openxlsx readr reshape stringr tibble tidyr xtable]; }; - reproducible = derive2 { name="reproducible"; version="1.2.6"; sha256="0lvicjaqlzqmjiichcq7dy4008h9vxxscrhg57jsvq8jvrz2rp7p"; depends=[data_table DBI digest fpCompare glue magrittr raster Require rlang RSQLite sp]; }; + reproducible = derive2 { name="reproducible"; version="1.2.7"; sha256="0is29n9cq299q4jv2l1bm9yp46fn42acp35wrjfayvxxhf70j4ch"; depends=[data_table DBI digest fpCompare glue magrittr raster Require rlang RSQLite sp]; }; reproj = derive2 { name="reproj"; version="0.4.2"; sha256="0lxd1vsxcf0r96jkl5jrh3kyklf90wcs4a27cs6ck93x1cxjnnni"; depends=[crsmeta PROJ proj4]; }; repurrrsive = derive2 { name="repurrrsive"; version="1.0.0"; sha256="1nmy88h2bfv2bad282kbrmnkjx9d8klgzv4mm8nspm049s09ydmz"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.3"; sha256="0dly09h8dpjlmvrd1wfg1gqcqhm03ax97qr0nd1p0fg9y0pdapya"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; + requiRements = derive2 { name="requiRements"; version="0.0.1"; sha256="17afbpny5j2rssi173k7sxi9q2syskjh8h0h89z24dqsbh3947mz"; depends=[remotes]; }; requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; - rerddap = derive2 { name="rerddap"; version="0.7.4"; sha256="0632nips935kkgbmw7xhsj1692jv344la1vvxlgmi1gh8jc643iq"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; - rerddapXtracto = derive2 { name="rerddapXtracto"; version="1.1.0"; sha256="1121p6i1fnbbzl9xyfjh7g4a1hdp0042gyx80rrda1qb6ggkavs2"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; + rerddap = derive2 { name="rerddap"; version="0.7.6"; sha256="0nfcwpspjvdqr00azfz47h5p513dnfx828hxg2wg13h3hdzh651g"; depends=[crul data_table digest dplyr hoardr jsonlite ncdf4 tibble xml2]; }; + rerddapXtracto = derive2 { name="rerddapXtracto"; version="1.1.1"; sha256="0vxnq50xxb6hzisyq4np2mwrnmhr8nb28jmr9mirj0dmxw0pfcl2"; depends=[abind dplyr ggplot2 httr maps ncdf4 parsedate plotdap readr rerddap sf sp]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; resampledata = derive2 { name="resampledata"; version="0.3.1"; sha256="1nxjqvxxvycccmh1n7lpc4k8zmwnciicfr5rzfid1icij5fzw3ak"; depends=[]; }; rescue = derive2 { name="rescue"; version="1.0.3"; sha256="0wq4ka1a7yhbjwr99ngykhn2r3czn3rqi63r6jn46pz15vnicwad"; depends=[data_table dbscan igraph irlba Matrix reticulate]; }; resemble = derive2 { name="resemble"; version="2.0.0"; sha256="1vr4aydwyipspkw662qw50219r30ms05i567j66yv1ccs574dw6a"; depends=[data_table foreach iterators lifecycle magrittr mathjaxr Rcpp RcppArmadillo]; }; reservoir = derive2 { name="reservoir"; version="1.1.5"; sha256="1qvjq8j2gxp6b8m3k3822f9na8a1kbwzzsmq70m763dcq293rgiz"; depends=[gtools]; }; + resevol = derive2 { name="resevol"; version="0.2.0.2"; sha256="0ksg0d9y0vvbz7mv0ap5r4i9s9pznxriz3p41l3zysgz9dry6jrr"; depends=[]; }; reshape = derive2 { name="reshape"; version="0.8.8"; sha256="0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad"; depends=[plyr]; }; reshape2 = derive2 { name="reshape2"; version="1.4.4"; sha256="1n0jrajpvc8hjkh9z4g8bwq63qy5vy5cgl2pzjardyih4ngcz3fq"; depends=[plyr Rcpp stringr]; }; - resourcer = derive2 { name="resourcer"; version="1.1.0"; sha256="1mdmwi0yfvsjsny2amwk34ry6vmaw3kqf2l39w49bd7yi4n2hjxr"; depends=[httr R6]; }; + resourcer = derive2 { name="resourcer"; version="1.1.1"; sha256="0zjr12fxjlw9zwa5n3l7r2m6vrksvczdzyhq3aj3hzqbm148z1cq"; depends=[httr R6]; }; respirometry = derive2 { name="respirometry"; version="1.3.0"; sha256="1ffhkvf8a8zhkysghd636k47bl7k5bdwkkg4m0pr1zlxpfrif82c"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; - restatapi = derive2 { name="restatapi"; version="0.10.3"; sha256="0w57ilmdxvkvzirwb87xbnsd70dvsn3gnk3g1rrv4cs14ycvl6f1"; depends=[data_table rjson xml2]; }; + restatapi = derive2 { name="restatapi"; version="0.11.3"; sha256="0pawnr7gfc77i5dri8zs880fafk1hibyyy40g2pc3r317x3a07vp"; depends=[data_table rjson xml2]; }; restaurant = derive2 { name="restaurant"; version="0.1.0"; sha256="1dr9nw5xkll1wnra2xi8dg2yiv85nibdg1i9lsn44v7cgr9vb32j"; depends=[]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restorepoint = derive2 { name="restorepoint"; version="0.2"; sha256="0pjp5dvycvfg75hhj8lrr2lrjn6n6bqj0ziwyd87lyi15b9j8w4s"; depends=[]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; - restriktor = derive2 { name="restriktor"; version="0.2-800"; sha256="0v7304912xhjz5bsngndvwi0y1qnk55xk9ariw2wi9msah1nm4d9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + restriktor = derive2 { name="restriktor"; version="0.3-100"; sha256="0249zhlskvk3ib1vncqh1vfpssh3la7fxd566ag2anfd53a644m8"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.5"; sha256="0k3s2i102hvsag7jiahgfpjc09646xjpxcpv5x3d91ch3xipdc0b"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; - reticulate = derive2 { name="reticulate"; version="1.20"; sha256="0ay8cb0d3lj702aw338lkc7sxj9j05izji3waww1z0lph16406bh"; depends=[jsonlite Matrix png rappdirs Rcpp withr]; }; + rethnicity = derive2 { name="rethnicity"; version="0.1.1"; sha256="1gd7q3v237py3qsnlvrc57g1s3k9dpa45salww7q0ngg7p7kzr16"; depends=[Rcpp RcppEigen RcppThread]; }; + reticulate = derive2 { name="reticulate"; version="1.22"; sha256="0v7m2pv94lfqiw8rhz3c9g66vvz4qvih4vd29rhfk2phmcwpnvmh"; depends=[here jsonlite Matrix png rappdirs Rcpp withr]; }; retistruct = derive2 { name="retistruct"; version="0.6.3"; sha256="1zij37n2ja3yx6n1agdkb3lj42p01parcg6djv60bng9c2qq0wsl"; depends=[foreign geometry png R_matlab R6 rgl RImageJROI RTriangle sp ttutils]; }; retractcheck = derive2 { name="retractcheck"; version="1.0.0"; sha256="1c4p8afh9g359s560sswcys3manc0lqvk0aqgvd09p4rpzls2dm7"; depends=[httr plyr textreadr]; }; retrodesign = derive2 { name="retrodesign"; version="0.1.0"; sha256="173jrpzasimplv8vbm8gzpl8aibnsjkgvhz1hd75is0b2l8gnbxy"; depends=[]; }; - retroharmonize = derive2 { name="retroharmonize"; version="0.1.13"; sha256="0zc60vkkzhdm8bp1ivxgbn7z910jh6xgv10n0agfq0hq08ca5cxr"; depends=[assertthat dplyr fs haven here labelled magrittr pillar purrr rlang snakecase tibble tidyr tidyselect vctrs]; }; - retrosheet = derive2 { name="retrosheet"; version="1.1.3"; sha256="0zqwqv1j56116n9j4gg23j5dv88gfx7df6czj1idns1apxjqr283"; depends=[httr rvest stringi stringr xml2]; }; + retroharmonize = derive2 { name="retroharmonize"; version="0.1.17"; sha256="13fyc0wq3jqjbdzl0pncf7s452mvz94z7h2da107kfaqrim9vbgs"; depends=[assertthat dplyr fs glue haven here labelled magrittr pillar purrr rlang snakecase stringr tibble tidyr tidyselect vctrs]; }; + retrosheet = derive2 { name="retrosheet"; version="1.1.4"; sha256="13vicafx3z83wrxhc6d7bk6bd0m49qcd5li2b4j0bgzavrx6clxs"; depends=[httr rvest stringi stringr xml2]; }; retry = derive2 { name="retry"; version="0.1.0"; sha256="1yfcfvszfjnvvnjcywgchyiyj3jk9nmvk3h40g6bc24xapfkfl2p"; depends=[later rlang]; }; reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; - reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; }; + reval = derive2 { name="reval"; version="3.0-0"; sha256="0b9bmj88rxc3kk14l84v3v4c5252nnfs7h43a9sbggm6sdl1k2am"; depends=[dplyr furrr future purrr rlang]; }; revdbayes = derive2 { name="revdbayes"; version="1.3.9"; sha256="0j29hp21dab2fnsb6d41ykvyhfkfz1hf0qjpsz4lypc2rnbc3mpm"; depends=[bayesplot Rcpp RcppArmadillo rust]; }; revealedPrefs = derive2 { name="revealedPrefs"; version="0.4.1"; sha256="1m8y1mj39bnf9q0n9mi0ashvb79lksx5dfkxb04qj2h5kkyxg49g"; depends=[pso Rcpp RcppArmadillo]; }; revealjs = derive2 { name="revealjs"; version="0.9"; sha256="0h4csxrcl1rzmj3g01nf0mr990zc8swrf4jvmxwqsyzx9v2cqbnc"; depends=[rmarkdown]; }; + reveneraR = derive2 { name="reveneraR"; version="0.1.0"; sha256="086ar2k3385iq5ci8cjshdciiiw01ixzia3f05gfy4pmzphzz8w8"; depends=[dplyr httr jsonlite magrittr purrr tibble tidyr tidyselect]; }; revengc = derive2 { name="revengc"; version="1.0.4"; sha256="1nipkff9zmkdi509qfdrmvsq5c643xd7bzzw5bchxd8nmfqb412i"; depends=[dplyr mipfp stringr truncdist]; }; reverseR = derive2 { name="reverseR"; version="0.1"; sha256="0pzk97q1zs5g1v4ngqd6bkwwxcp89j890nycpc99ipycbgm2r9yw"; depends=[DT knitr markdown shiny]; }; revgeo = derive2 { name="revgeo"; version="0.15"; sha256="1ns7d1817475lriss6wwgvdm6lj760p40yxqaifla13c2xb73a55"; depends=[RCurl RJSONIO]; }; + revpref = derive2 { name="revpref"; version="0.1.0"; sha256="07gbwrwmnq5b48fgdb7m2j8ygz60qm5m23ai7g7yidwk2fayq7ym"; depends=[gtools]; }; revss = derive2 { name="revss"; version="1.0.1"; sha256="02v39vvszzikscl8211l5xr0nyqwg28vdlg8vsyad6rnmgy8xd4f"; depends=[]; }; revtools = derive2 { name="revtools"; version="0.4.1"; sha256="0nms7rwpdzf3xq2incraxppha4c830gcygpbnhwjs92c836hh2f0"; depends=[ade4 modeltools ngram plotly shiny shinydashboard slam SnowballC stringdist tm topicmodels viridisLite]; }; revulyticsR = derive2 { name="revulyticsR"; version="0.0.3"; sha256="0dz9c26qwasgpp6a5fqh1rgq0hp9dhsrcm1h2hbp0cisri8iwsjf"; depends=[dplyr httr jsonlite magrittr purrr tibble tidyr tidyselect]; }; @@ -14403,58 +15009,60 @@ in with self; { rewie = derive2 { name="rewie"; version="0.1.0"; sha256="1ysrpd2cqmz27sjj3dh0wpg86685d708kjwiqybwjlw9ap55jb06"; depends=[lme4 MASS plm rockchalk]; }; rex = derive2 { name="rex"; version="1.2.0"; sha256="0m7bq8db3m5dhf01rw7xc7xy1ciq3m7dfgsl80p8cy4h8vqr3d06"; depends=[lazyeval]; }; rexpokit = derive2 { name="rexpokit"; version="0.26.6.7"; sha256="13zrr5qj96vh50mknlc2pl7gq1kx5ahwk3n9ij4xr67734x3mx1r"; depends=[Rcpp]; }; - rfPermute = derive2 { name="rfPermute"; version="2.1.81"; sha256="0mak4r3j5vbjjkcsbxj0yg2xrbipq4rz873b02drkb769nh3d16a"; depends=[abind dplyr ggplot2 gridExtra magrittr randomForest rlang scales swfscMisc tibble tidyr]; }; + rextendr = derive2 { name="rextendr"; version="0.2.0"; sha256="0d5nkdphdlyyd9qi3dam16ag89b0h6n38q91pkp71n9xhb4ffrx8"; depends=[brio callr cli desc dplyr glue pkgbuild pkgload purrr rlang rprojroot stringi tibble withr]; }; + rfPermute = derive2 { name="rfPermute"; version="2.2"; sha256="1f977lqg7khrd5hbgz27vwkqxjmr3xa5qms4pnks7fyz0fq9p9vf"; depends=[abind dplyr ggplot2 gridExtra magrittr randomForest rlang scales swfscMisc tibble tidyr]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-5"; sha256="1anwvmxn3xrc1aqxl75rzlk4wby8l54rmkp0bgi8dgbz2l223xr0"; depends=[cluster randomForest]; }; rfVarImpOOB = derive2 { name="rfVarImpOOB"; version="1.0.1"; sha256="16ivcnnzrgqzfzcbdyi10rwn8r8r0yyxyfpx25lxafb6pj3kxpvf"; depends=[binaryLogic dplyr ggplot2 ggpubr magrittr prob randomForest titanic]; }; - rfacebookstat = derive2 { name="rfacebookstat"; version="2.3.0"; sha256="1g0ln7dan504br3h72g0prnwdwdsa8zh557r6sda7w29nzc809ql"; depends=[dplyr httr jsonlite pbapply purrr stringr tidyr tidyselect]; }; + rfacebookstat = derive2 { name="rfacebookstat"; version="2.4.0"; sha256="1jg1kmkk47lqncnwm8bb80bp2m07hdi7h0sh5dvas03063cgf54l"; depends=[dplyr httr jsonlite pbapply purrr stringr tidyr tidyselect]; }; rfacts = derive2 { name="rfacts"; version="0.1.1"; sha256="1qkc619vhph6lgrf59kbz9cda2vqwfvb5b9mm2f11qqy310ha9aj"; depends=[digest fs tibble xml2]; }; rfieldclimate = derive2 { name="rfieldclimate"; version="0.1.0"; sha256="1s7awczna9dxdq97sr5fsbs4qv7rx4wi2z3inwdp33md1bvyq4i7"; depends=[digest dplyr httr jsonlite lubridate magrittr purrr tidyr]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; rfinterval = derive2 { name="rfinterval"; version="1.0.0"; sha256="1z7v0sbql6g2h3fr1268nj79rbx1d33hjfaraxhbikrjgb8mbp0w"; depends=[MASS ranger]; }; - rfishbase = derive2 { name="rfishbase"; version="3.1.7"; sha256="1qjnn43bgp45lgkdz4x4yfs75xndg3nvhca659nxxwcvs31npnlw"; depends=[arkdb curl DBI dbplyr dplyr gh magrittr memoise progress purrr readr rlang RSQLite stringr]; }; + rfishbase = derive2 { name="rfishbase"; version="3.1.9"; sha256="0mviki09ydgbnd5mgbikvijxjfg7jrf836campnlz0b9xvk32kb8"; depends=[arkdb curl DBI dbplyr dplyr gh magrittr memoise progress purrr readr rlang RSQLite stringr]; }; + rfishdraw = derive2 { name="rfishdraw"; version="0.1.0"; sha256="0204s8jy6shr694hacrq4j0lia9l59rk8kc75sdw87c09q7kjld2"; depends=[ggplot2 jsonlite]; }; rfisheries = derive2 { name="rfisheries"; version="0.2"; sha256="16j3hn1py8khqadmh81qsg76c62wzqkaq3fn39z0z5mgynmcm62j"; depends=[assertthat data_table ggplot2 httr rjson]; }; rfishnet2 = derive2 { name="rfishnet2"; version="0.2.0"; sha256="0g90h4353kp7szv3971kb4l5x3x08qx4f9ln85n5g3b3zdg77dkz"; depends=[dplyr ggplot2 pracma rworldmap sf]; }; rflexscan = derive2 { name="rflexscan"; version="0.4.0"; sha256="1hp8crrs0f534j60db1byi3jcn815kl1i7afrzh6ww48mxnmxrhj"; depends=[igraph Rcpp rgdal sp]; }; rfm = derive2 { name="rfm"; version="0.2.2"; sha256="1s8h9ll4l5xq3m7ib83zrab49p5q4wclk8qiy2hgjr2hq1sb7wak"; depends=[dplyr ggplot2 ggthemes lubridate magrittr RColorBrewer rlang tibble tidyr xplorerr]; }; - rfml = derive2 { name="rfml"; version="0.1.0"; sha256="133adpfjpp14m47841k6ybq9lrvby9bxgr5zs4i3akjr2575nq1j"; depends=[httr jsonlite PKI XML]; }; rfoaas = derive2 { name="rfoaas"; version="2.1.0"; sha256="0w6m3lvfb60a2zfvyc0ksnfllb2ndy45b301vk9f3nr27lxdz6dm"; depends=[httr]; }; rfordummies = derive2 { name="rfordummies"; version="0.1.5"; sha256="1glzc20sbv90fbazy3wh6drqd5dkh47s3fjqzgm78dkmj6gp9hdv"; depends=[openxlsx]; }; rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rfviz = derive2 { name="rfviz"; version="1.0.0"; sha256="0rzyy7r2ybqjnp1g5bbkxydpa93h8q4r71kdaj77r475m2i4kb6b"; depends=[loon randomForest]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; - rgbif = derive2 { name="rgbif"; version="3.5.2"; sha256="0qgjh68k1h44lpf6ihzbqq74ydq3hj2yz2m6fnksxa4sqxawqbv7"; depends=[conditionz crul data_table ggplot2 jsonlite lazyeval magrittr oai R6 tibble wellknown whisker xml2]; }; - rgdal = derive2 { name="rgdal"; version="1.5-23"; sha256="0vnb7kw762y349pda4aq1hx0smafylmn3635l963qykfji5p99cw"; depends=[sp]; }; - rgdax = derive2 { name="rgdax"; version="1.0.0"; sha256="16ph6n1nyl2v2w51ih6wzkpw0j0hfa3f60q1g6p9zis59j0rh7d9"; depends=[digest httr jsonlite RCurl]; }; - rgee = derive2 { name="rgee"; version="1.0.9"; sha256="0mrmny4yf3x8wlc4ayghc1gchhlb6vvn57ynnxa4wv8smq1k8qci"; depends=[cli crayon jsonlite leafem leaflet magrittr processx R6 reticulate]; }; + rgbif = derive2 { name="rgbif"; version="3.6.0"; sha256="083zj5bcbag2qhx2c04ym666lclfyv10w4zd2kvbm7nqhmy8ah99"; depends=[conditionz crul data_table ggplot2 jsonlite lazyeval magrittr oai R6 tibble wellknown whisker xml2]; }; + rgdal = derive2 { name="rgdal"; version="1.5-27"; sha256="0mjpxs2dvbngbchlb0kfs0jcac7v88slwxmka81ds92lggnmb9b2"; depends=[sp]; }; + rgdax = derive2 { name="rgdax"; version="1.2.1"; sha256="01hpyyhb6jcw9w0q9h4ghgh4cbba27mfl9zdv4vv4ppakvl80czl"; depends=[digest httr jsonlite plyr RCurl]; }; + rgee = derive2 { name="rgee"; version="1.1.0"; sha256="06gmb3qa1d8g796wdgsyvalb7bpx71qn45n8m5kc227k652r99yr"; depends=[cli crayon jsonlite leafem leaflet magrittr processx R6 reticulate]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; - rgenie = derive2 { name="rgenie"; version="1.0.0"; sha256="1gsq9pkah5fnhjsxbyidngcs0362p8jnpvxycpkb9jaf5ykpq56m"; depends=[cowplot dplyr egg FNN forcats ggdendro ggplot2 gridExtra IRanges magrittr readr Rsamtools stringr tibble tidyr variancePartition]; }; rgenius = derive2 { name="rgenius"; version="0.1.0"; sha256="1gpglnhicyv16ym224wzaw52w9xr63slm75wvidl3z14izzyy7ga"; depends=[doParallel dplyr foreach httr purrr rvest stringr tibble]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-3.0"; sha256="0p93wf6ghgz2nifxbscb6bhahh5jd2ba7nh1c2mb6fmbxnsi3swv"; depends=[]; }; - rgeoda = derive2 { name="rgeoda"; version="0.0.8-1"; sha256="11138d3bg9rkyv06sqa9hkr6s0s69b48rf5ji8fam2lgvz28p5g3"; depends=[BH digest Rcpp sf]; }; + rgeoda = derive2 { name="rgeoda"; version="0.0.8-6"; sha256="1yfqsd89mxjq1wr407x17kih7mddwxa6sz8rqfqm3xawab7qm75f"; depends=[BH digest Rcpp sf]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.3.1"; sha256="1ikharp5f0ddh5wx1a8xf46fcwpz9xc4vl7s386h0jmkph1s0072"; depends=[httr Rcpp]; }; rgeopat2 = derive2 { name="rgeopat2"; version="0.3.9"; sha256="0l0sqkvjkzp4lmyk55l7zc02y04sa43cps47005gq8c38kyks45k"; depends=[readr sf stringr]; }; - rgeoprofile = derive2 { name="rgeoprofile"; version="0.2.1"; sha256="0a4b2v7rslvvc8z2fyv2imwhdl198giwhn8i68wk57jx0wqwzll8"; depends=[aspace geosphere leaflet pals RANN raster sp spatstat_geom splancs]; }; - rgeos = derive2 { name="rgeos"; version="0.5-5"; sha256="086l0qk3p4jq23bs91c4a65x4qz99z0hy0vsnvfqfvppdzz0vajb"; depends=[sp]; }; - rgexf = derive2 { name="rgexf"; version="0.16.0"; sha256="1vj5ha1qx0xzflchxf25ycys6clfn9y32m1717afzkvhmkwisrra"; depends=[igraph servr XML]; }; + rgeoprofile = derive2 { name="rgeoprofile"; version="0.2.2"; sha256="1nk3qzwcvvq3n1da480zk047wl738fjyvarakm00wwrbnb3ax70j"; depends=[geosphere leaflet pals RANN raster sp spatstat_geom splancs]; }; + rgeos = derive2 { name="rgeos"; version="0.5-8"; sha256="05539shf38slvq38pf92h9q57vmzn2vfqbirl3pbbvvc2j957cqd"; depends=[sp]; }; + rgexf = derive2 { name="rgexf"; version="0.16.2"; sha256="00c2zka1n3k7p1l0mlchr063s6x58p9r3fb64d4wgl4rvsq55q3f"; depends=[igraph servr XML]; }; rgho = derive2 { name="rgho"; version="2.0.1"; sha256="1byvq2swn2j9v0zy5smjklv7bkncrclhli62cf1f2wiah5qg8sv2"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr rlang tibble tidyr]; }; - rgl = derive2 { name="rgl"; version="0.106.8"; sha256="0m1zvbmw81za680zq7h4agxr88pi7h5hz812r45vzmgc7hlw4apw"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; - rglobi = derive2 { name="rglobi"; version="0.2.22"; sha256="0kws5qrs74z6mkg8mckrfscgbd1gdbxk76r7g94p74h1xmvvjc3i"; depends=[curl RCurl readr rjson]; }; + rgl = derive2 { name="rgl"; version="0.107.14"; sha256="1z5h4wbjj18prcykc96rqcn699pnqw6vybwj2mpbbbdw2lr3q8b7"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr]; }; + rglobi = derive2 { name="rglobi"; version="0.2.25"; sha256="0w8kggnn9jjrnhzic4y0kfdqnc3wvbgwmkgch8ilayxv2d7iiaq7"; depends=[curl RCurl readr rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; rgnparser = derive2 { name="rgnparser"; version="0.2.0"; sha256="01dmnyyprnayzn21vgdj9058l17kx8z4fisw4bp4lc6yif39q1r9"; depends=[jsonlite readr sys tibble]; }; + rgoogleads = derive2 { name="rgoogleads"; version="0.3.0"; sha256="00sbxcnws0gvn7w2yjzpv2i2kjqzl875l24fnxbz1jfq4xc2npx3"; depends=[cli dplyr gargle httr jsonlite magrittr pbapply purrr rlang rlist rvest snakecase stringr tidyr withr]; }; rgoogleslides = derive2 { name="rgoogleslides"; version="0.3.2"; sha256="0h9gws1vcf0zdd21d8b65c2yz9kxppp3218h5lhd5iz879ajwa2i"; depends=[assertthat httr jsonlite R6]; }; + rgovcan = derive2 { name="rgovcan"; version="1.0.3"; sha256="0b1fk7w3x60y0j74pglv14i0d76f13pzslghrday04qzkxy9smvd"; depends=[ckanr cli crayon crul tibble]; }; + rgplates = derive2 { name="rgplates"; version="0.1.0"; sha256="1pxvccyq8m1dbq4rl0fi4vwp6k5w83gjwpga9r182z87cij97j43"; depends=[rgdal sp]; }; rgr = derive2 { name="rgr"; version="1.1.15"; sha256="1mrnmbh2crhkwdi37q59hx76afvkhgzgaacg3688q7jp23d58z6x"; depends=[fastICA MASS]; }; rgrass7 = derive2 { name="rgrass7"; version="0.2-5"; sha256="1vj3m7071wd31hzas40l8nj6blr6r9cyqi6rdi68842vhznwbac8"; depends=[XML]; }; rgrassdoc = derive2 { name="rgrassdoc"; version="1.0.0"; sha256="18fcacf4v9n8cd27rc2lidwqm04151ya30pcs0bfhkssz80x0zds"; depends=[cli rlang rstudioapi xml2]; }; rgsp = derive2 { name="rgsp"; version="0.2.0"; sha256="1fk0k479srfr0f4a5abyzcrzwy9hr1v5xf0jgs36fbim9bh7njlc"; depends=[dplyr magrittr tibble]; }; rgugik = derive2 { name="rgugik"; version="0.3.1"; sha256="17cvxbjjzyf4v8pwcwikb02qrbwgsr6f6bh4brs48zh1jvzbcgzd"; depends=[jsonlite openssl sf]; }; rgw = derive2 { name="rgw"; version="0.3.0"; sha256="0hzkajmvqkmv6c238rdgyc6g16h96d5a0lnajnn5m87j0gwsl6wa"; depends=[]; }; - rhandsontable = derive2 { name="rhandsontable"; version="0.3.7"; sha256="1y6dlpzid5apjx0gphkym7gq3lhwp0bxan8ca274pg170xyb33h8"; depends=[htmlwidgets jsonlite magrittr]; }; + rhandsontable = derive2 { name="rhandsontable"; version="0.3.8"; sha256="07fj6npq65pq836vdwblkhprdaq4i4f13cwdmm9gmxrnk72xj7lh"; depends=[htmlwidgets jsonlite magrittr]; }; rhcoclust = derive2 { name="rhcoclust"; version="1.1.0"; sha256="1d9a29h4h6z04vjjdfi0sx7wpl8iw5zg2ymjpjlppzbbzzq2l8n2"; depends=[fields igraph]; }; rheroicons = derive2 { name="rheroicons"; version="0.3.2"; sha256="16rvsqlwp9j2v3zaqp37pwdjdj9ail21i4vicxq07c11x7r567gx"; depends=[htmltools shiny stringr]; }; rhierbaps = derive2 { name="rhierbaps"; version="1.1.3"; sha256="0i4sr2wwzzl8vki5zihnd8v4ia2kji09cmf4ld07b6k099g5xprr"; depends=[ape ggplot2 matrixStats patchwork purrr]; }; rhli = derive2 { name="rhli"; version="0.0.2"; sha256="1mb6bizqkg7zd8nc5a81fw7d0y0vcv6zh6y28k9vikqmc5l1n21q"; depends=[]; }; rhmc = derive2 { name="rhmc"; version="1.0.0"; sha256="1m79f1hx404y0k8lk3n6jnzhr6wwrk83xiym68sq1zvj0wjqiqmw"; depends=[]; }; - rhmmer = derive2 { name="rhmmer"; version="0.1.0"; sha256="0875b29i8rl9iypxp7vw514avq0ac4abdlfq3861cdd3kgycw8jh"; depends=[dplyr magrittr readr rlang tidyr]; }; rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; }; rhoR = derive2 { name="rhoR"; version="1.3.0.3"; sha256="0l387m6l2x3djn1liag4m49835m2mny006sjzqbravb1famrvawi"; depends=[Rcpp RcppArmadillo]; }; rhosa = derive2 { name="rhosa"; version="0.1.0"; sha256="0aygdp7xp5hvr4i1s0isgbbr3pd164aj1px9bns6vdh0svq533qg"; depends=[]; }; @@ -14463,29 +15071,30 @@ in with self; { rhymer = derive2 { name="rhymer"; version="1.1.0"; sha256="00piml975chmmm3ipskzhfbbp5sq47yg5a78hsisssbzwwxsmbs0"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; ri2 = derive2 { name="ri2"; version="0.2.0"; sha256="0zadczx7awymn420hf15sci5z1hq5rpid866gpa1wmrhcyh177nh"; depends=[estimatr generics ggplot2 pbapply randomizr]; }; - ribd = derive2 { name="ribd"; version="1.2.0"; sha256="0pqy2a4zb9idmib9is5xk1qavannrij3f6765nrlprr13w4x3vm4"; depends=[glue kinship2 pedtools slam]; }; + ribd = derive2 { name="ribd"; version="1.3.0"; sha256="1vidhghqq2g9v4l7hwq39llbbps8hrfpy1i9s170gak1d38dkciq"; depends=[glue kinship2 pedtools slam]; }; ricegeneann = derive2 { name="ricegeneann"; version="1.0.2"; sha256="0wxqp4pfdhvq4mwzjrqi3m9jiayk5bp1ha222mpm4qz1pl41cy9w"; depends=[riceidconverter]; }; riceidconverter = derive2 { name="riceidconverter"; version="1.1.1"; sha256="143f76v3k2q9ddcxf2nzvd04pjgy7p120ln0zkmxpal20c81dwq6"; depends=[dplyr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; - ricu = derive2 { name="ricu"; version="0.1.3"; sha256="0gcd4nlkhkl7smap26kilbiw0ag6vavcm3plik8579ha1pimji15"; depends=[assertthat backports cli curl data_table fansi fst glue jsonlite prt readr rlang tibble vctrs]; }; + ricu = derive2 { name="ricu"; version="0.5.0"; sha256="1c97sa9a1nnhxcscn2zfblwk8vw6irswgwyzv5pn7xpf0vb13869"; depends=[assertthat backports cli curl data_table fansi fst glue jsonlite openssl prt readr rlang tibble vctrs]; }; ridge = derive2 { name="ridge"; version="2.9"; sha256="0h6c1sv9nrwv0kx92kcdgcx149ls89zdlm2v7si27xcc040f5cz0"; depends=[]; }; ridigbio = derive2 { name="ridigbio"; version="0.3.5"; sha256="0526nscxynl3857zybpms1wr3230qby29kxglm919pcdvpjb5kz5"; depends=[httr jsonlite plyr]; }; ridittools = derive2 { name="ridittools"; version="0.1"; sha256="1m9xbwxb277l4cd85qxmpw66gyavpwamgwr8kyf8vqarzfbwiilr"; depends=[]; }; riem = derive2 { name="riem"; version="0.1.1"; sha256="0lwhsxb4pm26kb65hs8pa63bsbrgy0zchqm4i6pq9f2r9h8vsm1m"; depends=[httr jsonlite lubridate tibble]; }; rifle = derive2 { name="rifle"; version="1.0"; sha256="1r0cfj3vzndgiarl9sb38zmpnpm4p8v9l5cm9c1m6g2q9kvpgpbs"; depends=[MASS]; }; + rigr = derive2 { name="rigr"; version="1.0.1"; sha256="0cjk03llklml3h6dmdahdbnxanynii64q664fax62dbkncxg5gqa"; depends=[Exact plyr sandwich survival tibble]; }; riingo = derive2 { name="riingo"; version="0.3.1"; sha256="1ww9ps0v1yga9dwb68crbhf56xw2svl7az95ifrdrswyyikj02vj"; depends=[crayon glue httr jsonlite purrr rlang tibble vctrs]; }; - rijkspalette = derive2 { name="rijkspalette"; version="1.0.1"; sha256="0al5niymn6k6px6fh1pk3rvk3a3b2966bdfh0hprcjjl75a9mgvq"; depends=[crayon curl imager jsonlite]; }; + rim = derive2 { name="rim"; version="0.4.1"; sha256="1m3wc8nd2n1s86xxm2gdgz8qq5p3y92xr3xqfcs98ygn2syair9z"; depends=[digest knitr R6 Rcpp stringr]; }; rinat = derive2 { name="rinat"; version="0.1.8"; sha256="1jp19scgizfi3qp419k2nkkpjm8zcvcgj85zlsa27sd6fjv6vv6m"; depends=[curl ggplot2 httr jsonlite maps plyr sp]; }; - ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; }; + ring = derive2 { name="ring"; version="1.0.3"; sha256="1ljmqq7mngxs59nri36w0cx6a6d85qsbk9v9698hfx9asicv398d"; depends=[R6]; }; rintimg = derive2 { name="rintimg"; version="0.1.0"; sha256="0jzs4mdwpzbpl0wchyhl3cpywk25ayaxalr12p4cnjl7vnmdm7dp"; depends=[glue htmltools]; }; - rintrojs = derive2 { name="rintrojs"; version="0.2.2"; sha256="0vyqb3pyrh12saddar71ac9csn2vkd2j8ln6ygpqys8ky1lc3427"; depends=[jsonlite shiny]; }; - rio = derive2 { name="rio"; version="0.5.26"; sha256="1k6zxjb2bb0z6rv7zmkbaz85cbvs84mj602ikkwk60alh8kpdw2d"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; + rintrojs = derive2 { name="rintrojs"; version="0.3.0"; sha256="00l5mk80gj3xkbf3m1kip566ic98bhd88lh0bg69ybkpk4gifpyw"; depends=[jsonlite shiny]; }; + rio = derive2 { name="rio"; version="0.5.27"; sha256="02nxwg1d2m1h09a6ismhcp71gmq1c8rhbbl98if2v7xsvdn63sz0"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; rioja = derive2 { name="rioja"; version="0.9-26"; sha256="02af6is38nakzr1hf9688n32m5glk1jyp2d9p4irn0mzk7r6r976"; depends=[mgcv vegan]; }; ripserr = derive2 { name="ripserr"; version="0.1.1"; sha256="1rwsd1yi5vrzdscjgr27fw0d1a6nkc8g2w5hqgqijiwm25h4wl17"; depends=[Rcpp]; }; rise = derive2 { name="rise"; version="1.0.4"; sha256="12r7mbaxp9pjypbpjxlsbqg7spw80gjgm2w0lsvgvclffc50a6ni"; depends=[dplyr ggplot2]; }; riskCommunicator = derive2 { name="riskCommunicator"; version="0.1.0"; sha256="1f8nfha6sgn52f3qvb2bkawv6c8ivrm5n6sy1ggx9337xjl35baz"; depends=[boot dplyr ggplot2 gridExtra magrittr purrr rlang tidyr tidyselect tidyverse]; }; - riskParityPortfolio = derive2 { name="riskParityPortfolio"; version="0.2.1"; sha256="0l51spflm7wwwz5yrkw1i5534d1840wyyh2w3mz8apaxac76l0xz"; depends=[alabama Matrix nloptr quadprog Rcpp RcppEigen]; }; + riskParityPortfolio = derive2 { name="riskParityPortfolio"; version="0.2.2"; sha256="1n2z1vhslrip209j79wm03wmwqdcnbm939sir2wfs5h2cfv126xk"; depends=[alabama Matrix nloptr quadprog Rcpp RcppEigen]; }; riskPredictClustData = derive2 { name="riskPredictClustData"; version="0.2.6"; sha256="0mvy9299pg374gvvqs9lmj2j0f3bzyy279kjpz7jq35hkgz5wif3"; depends=[gee Hmisc MASS mvtnorm]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; riskRegression = derive2 { name="riskRegression"; version="2020.12.08"; sha256="0xa603fcpjd8kgcn1ldwzqpll7h6x738lknjjb5gbly84wbhv6aw"; depends=[cmprsk data_table doParallel foreach ggplot2 lattice lava mets mvtnorm plotrix prodlim Publish ranger Rcpp RcppArmadillo rms survival timereg]; }; @@ -14495,13 +15104,13 @@ in with self; { riskyr = derive2 { name="riskyr"; version="0.3.0"; sha256="07fm3gmjydby3mxivwr3rbg6q7fbjlnggfk26sfiqb2wl08dmx6j"; depends=[]; }; ritis = derive2 { name="ritis"; version="1.0.0"; sha256="0dk1hpj2cahlw4lcdjnnllpnvdimaml57sfcw07iz2s0f8c24yrj"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-5"; sha256="0n19jlrs12iysq45xyi3zvghkircg0ww5vbsfpnqkw5b22zsv30s"; depends=[MASS quantreg rrcov]; }; - riverdist = derive2 { name="riverdist"; version="0.15.3"; sha256="029dkki4j285ik1fif0hd9gzq332xv7p88wbjbh52464waajh8pl"; depends=[rgdal sp]; }; + riverdist = derive2 { name="riverdist"; version="0.15.4"; sha256="09rs38dmyy1dxqzgf5v46gcnhaaqkhkw66h3zfz1dnl55b4kpvdl"; depends=[rgdal sp]; }; rivernet = derive2 { name="rivernet"; version="1.2.1"; sha256="0p8jyigbxipwds9pdw2gzv3ql5yikg1ik4vbk4drylbp5xhmvyja"; depends=[]; }; riverplot = derive2 { name="riverplot"; version="0.10"; sha256="04ap1dsa7fx03l73jhv1ql3adaaaz2100qawdplxa9xmrllgcgbj"; depends=[RColorBrewer]; }; rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; rivr = derive2 { name="rivr"; version="1.2-3"; sha256="10k4cqrlzcy5g0yqbkrzxfz0dwsnf8kgmfq011lj13kxpb38bpvy"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1.1"; sha256="0wv1vpy8ql1r9ya5mfqxdj7jv5wk029g8hjjp0xqp8dm507vj11x"; depends=[V8]; }; - rjags = derive2 { name="rjags"; version="4-10"; sha256="1nhaim84ww8fd6m8xlpmngqcnp2qpql29ahc38366fxja3ghngmx"; depends=[coda]; }; + rjags = derive2 { name="rjags"; version="4-11"; sha256="0vs86jji4h26y8aczy8r08jiq7ax0idlrm87mmvaa5sxlqmqa705"; depends=[coda]; }; rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rjdmarkdown = derive2 { name="rjdmarkdown"; version="0.2.0"; sha256="14ndhhxxx7jb9ljhfjxmdrl3kgb1zsrv00kznl2k50fwxx4z66f2"; depends=[kableExtra knitr magrittr RJDemetra]; }; rjdqa = derive2 { name="rjdqa"; version="0.1.1"; sha256="0d7jv3a2a7p7h6jnr5znln06x6m4mksb6cy44xdxir1pwcd1z6br"; depends=[plotrix RJDemetra XLConnect]; }; @@ -14511,7 +15120,7 @@ in with self; { rjqpd = derive2 { name="rjqpd"; version="0.2.3"; sha256="14vbp9s2859h4n3m3bq830nvxvk58h3mvvdnb27qsalbcfwd94v5"; depends=[]; }; rjson = derive2 { name="rjson"; version="0.2.20"; sha256="0v1zvdd3svnavklh7y5xbwrrkbvx6053r4c5hgnk7hz7bqg7qa1s"; depends=[]; }; rjstat = derive2 { name="rjstat"; version="0.4.1"; sha256="0kqnl4wizmain70ady982aldhscf24870shvf3sviknplshhgk8j"; depends=[checkmate jsonlite]; }; - rjwsacruncher = derive2 { name="rjwsacruncher"; version="0.1.0"; sha256="0pbf3yl7cnx8vv07x9nwgrglv5h8r135fc840pxvapi099nr7ijl"; depends=[XML]; }; + rjwsacruncher = derive2 { name="rjwsacruncher"; version="0.1.2"; sha256="0kqr2pd3smqxx0h35k8mf7wamdqpqrncjhmvbiap8bwbkhm4sqhb"; depends=[XML]; }; rkafka = derive2 { name="rkafka"; version="1.1"; sha256="0c0hszsmmd876jcfamjcfb7bxw7869zgy99j4i6ksb8za232nmmw"; depends=[rJava rkafkajars RUnit]; }; rkafkajars = derive2 { name="rkafkajars"; version="1.1"; sha256="121qnzxhipgv145lhmr6h356jpdd6knsx7f21cv9a8r5r009d42z"; depends=[rJava RUnit]; }; rkeops = derive2 { name="rkeops"; version="1.4.2.2"; sha256="1b2sdbhx1ar1325mf1xgc561as9x8q8vjqslly9xms2h572c8yn3"; depends=[openssl Rcpp RcppEigen RhpcBLASctl stringr]; }; @@ -14519,8 +15128,8 @@ in with self; { rkt = derive2 { name="rkt"; version="1.6"; sha256="1sqij8ivjrrb1lii3jwvgsx9zqv47ib1lhrh6zvvh5a67didwrih"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; rlang = derive2 { name="rlang"; version="0.4.11"; sha256="1pfm24jjkxzdb5qcbc05dcjxyk69zpfr5jv4xakqh1xh41mr43kl"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.4.0"; sha256="0a5m4i5ld32rd1ymp0hhgw0pv3rhfgbf22fgafx3gxvc74fxyfjz"; depends=[BH data_table Rcpp]; }; - rlc = derive2 { name="rlc"; version="0.3.0"; sha256="187nm0hl71yhnsp9cp9s33sv8jhzrmy36s62fpd8kh8yrmh5dkz8"; depends=[hwriter jrc jsonlite plyr R6 stringr]; }; + rlas = derive2 { name="rlas"; version="1.5.0"; sha256="0i1sp8r9r3m9m0r0bn741l9dnz4prn63hfxxzf9i8pshqp1nnnvk"; depends=[BH data_table Rcpp]; }; + rlc = derive2 { name="rlc"; version="0.4.0"; sha256="0hgar1hwd80wqxicc78c2jdmkjvqrn2yxa445qgh2ai2z29pcnnh"; depends=[hwriter jrc jsonlite plyr R6 stringr]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rle = derive2 { name="rle"; version="0.9.2"; sha256="0sagl0jggg40lihzy7pfq4593rfvc3b3f7g6ggi85s7n18qvwg40"; depends=[]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; @@ -14528,22 +15137,23 @@ in with self; { rless = derive2 { name="rless"; version="0.1.1"; sha256="0ham8kf2hbswrcnc5i5b3svywdwq3kwp9n66n4k9sllahl4x9jdn"; depends=[V8]; }; rlfsm = derive2 { name="rlfsm"; version="1.0.3"; sha256="0pnxy4gnkbk2alm4bjk6i1yik880li1jqkq63dwm7g441fhx30kx"; depends=[doParallel foreach ggplot2 plyr Rcpp Rdpack reshape2 stabledist]; }; rliger = derive2 { name="rliger"; version="1.0.0"; sha256="1gqdwmy073sg48id015q02bx20xsqyc6jpbw4nym3c09cqz681dr"; depends=[cowplot doParallel dplyr FNN foreach ggplot2 ggrepel hdf5r ica irlba Matrix mclust patchwork plyr psych RANN Rcpp RcppArmadillo RcppEigen RcppProgress riverplot rlang Rtsne uwot]; }; - rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; + rlist = derive2 { name="rlist"; version="0.4.6.2"; sha256="15q99rhbbjq8zd976yjmfnny45dd5fg2p2dv1sljg2kwi66nbppb"; depends=[data_table jsonlite XML yaml]; }; rlmDataDriven = derive2 { name="rlmDataDriven"; version="0.4.0"; sha256="1fhh2siafpqmvpxi2piccxvvn5n38s5d6as6iyn43rgpsslswc8g"; depends=[MASS tseries]; }; rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; rlog = derive2 { name="rlog"; version="0.1.0"; sha256="0g9gjf37gly68drm8a8zcnwxcigm2djsm3angglzwd04mmlkgwpy"; depends=[]; }; rly = derive2 { name="rly"; version="1.6.2"; sha256="1bb55g3rip524dccaxvahjxsi2cimxqvzc897pxplv3bb10pm0r2"; depends=[futile_logger R6]; }; - rmRNAseq = derive2 { name="rmRNAseq"; version="0.1.0"; sha256="0hh44bn7z7945aw722haazw8dx7fwzym67jismkygzhnksh59wqi"; depends=[AUC Biobase DESeq2 edgeR limma MASS Matrix nlme reshape rlang splineTimeR statmod]; }; + rmBayes = derive2 { name="rmBayes"; version="0.1.13"; sha256="1w600pzlz5kvdiqmz2g6gfsvifwkbm9b7j90cyg4vxy7fjpyxslk"; depends=[BH Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; rmake = derive2 { name="rmake"; version="1.1.0"; sha256="00qlki2vps505nxzmfykf1iyq4b0y20nb75hbfcj63ap46z7zk3c"; depends=[assertthat pryr rmarkdown visNetwork]; }; - rmapshaper = derive2 { name="rmapshaper"; version="0.4.4"; sha256="11diajgz8jkfa2d725n0iy0psiw3x4d7kbdvdrd1prwdjsyh7i5d"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; - rmapzen = derive2 { name="rmapzen"; version="0.4.2"; sha256="1vybg3lmrqghvd23jwpfmypvqz2b65bc0m2pwbpizwkkg35iza70"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; + rmapshaper = derive2 { name="rmapshaper"; version="0.4.5"; sha256="0mfmip9ncg60nciv6mf12z15wfyffd2shhclx78l0801295siybc"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; + rmapzen = derive2 { name="rmapzen"; version="0.4.3"; sha256="1n44l4sj6s78nr3hqidabkyg9pradk9c1mqfvzhanj2nrfdrwnqj"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; + rmarchingcubes = derive2 { name="rmarchingcubes"; version="0.1.3"; sha256="0cdmy728irmbd40xsc2k4r2g8am7s72ks7cw465fa92ml2xa6iq8"; depends=[Rcpp RcppArmadillo]; }; rmargint = derive2 { name="rmargint"; version="2.0.2"; sha256="0irq5114dd8pngl6k13r2rrsivijiqfldm6mby0q5a9wrj2vmwc9"; depends=[]; }; - rmarkdown = derive2 { name="rmarkdown"; version="2.7"; sha256="0shj637qhpcf30il3lhl3k5bxi5l3x3gf612hbqlakp1qrgrf8lm"; depends=[evaluate htmltools jsonlite knitr stringr tinytex xfun yaml]; }; - rmatio = derive2 { name="rmatio"; version="0.14.0"; sha256="072fxg81r4rsc71qrf5p6lr5s3gchbgvxhyzwlx3wxw7y2px6w7y"; depends=[Matrix]; }; - rmcfs = derive2 { name="rmcfs"; version="1.3.1"; sha256="1y59r4n2ywinfpkb7zn7gygl97w6p0rvr90sjqy4vdhi60ka16kf"; depends=[data_table dplyr ggplot2 gridExtra igraph reshape2 rJava stringi yaml]; }; - rmcorr = derive2 { name="rmcorr"; version="0.4.3"; sha256="1qz29jx3vcvlbmiby483kbpp2b7nfyys6h33ljhdyqiz4533mkyf"; depends=[psych RColorBrewer]; }; + rmarkdown = derive2 { name="rmarkdown"; version="2.11"; sha256="0xcpg9d009a71p5i6jczw02qcp907p5d52lp6vclrsp7019jawck"; depends=[evaluate htmltools jquerylib jsonlite knitr stringr tinytex xfun yaml]; }; + rmatio = derive2 { name="rmatio"; version="0.15.0"; sha256="1lrr6lga8inai3d0sicvyj2km4rc46qrr827m0lzjf7687i7mjxm"; depends=[Matrix]; }; + rmcfs = derive2 { name="rmcfs"; version="1.3.5"; sha256="0rbq2b9fw1x44v7ifxp8qgp4yciinw2sw9mqp4ms5jsxznpi2pi6"; depends=[data_table dplyr ggplot2 gridExtra igraph reshape2 rJava stringi yaml]; }; + rmcorr = derive2 { name="rmcorr"; version="0.4.4"; sha256="1g70savkj04mphmk4636k5jkrk3cbjs8np1r4ayki50n4zzb6p0j"; depends=[psych RColorBrewer]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; rmda = derive2 { name="rmda"; version="1.6"; sha256="1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc"; depends=[caret MASS pander reshape]; }; rmdcev = derive2 { name="rmdcev"; version="1.2.4"; sha256="0pdw390fknivnfkrzlk1rcv34prgnang50rfgmfpm2g9l6kjckxp"; depends=[BH dplyr Formula purrr Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders tibble tidyr]; }; @@ -14552,60 +15162,62 @@ in with self; { rmdpartials = derive2 { name="rmdpartials"; version="0.5.8"; sha256="15dw0pk1hdif839k60swna4li04inf7fzsiq9bxbw2wk5pdkqirn"; depends=[digest knitr rlang]; }; rmdplugr = derive2 { name="rmdplugr"; version="0.4.1"; sha256="16wmrya8wdipqcrh34k4v4iq05aqd0jwf7rg6w1wsvx2i9211xg6"; depends=[bookdown rmarkdown]; }; rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; - rmdwc = derive2 { name="rmdwc"; version="0.1.1"; sha256="0qbh3i44l6zqcqcnqv5lyf3lqdr10sahpykvg8p0bry8nscgv2hv"; depends=[knitr]; }; + rmdwc = derive2 { name="rmdwc"; version="0.2.1"; sha256="0zbwfi0rsx7mhk6s5798qg1zr7yv8hgw8qazznsd30diyprnyzbq"; depends=[knitr]; }; rmeta = derive2 { name="rmeta"; version="3.0"; sha256="0vkbnxp579v8zmcv1isdbzj5swpr6fq17zwparxcvzswjc2x9ydr"; depends=[]; }; rmetalog = derive2 { name="rmetalog"; version="1.0.3"; sha256="1naqhv81gdcgl2vi2sa3nb006mn8dxc0rdc49v321a5b10bybzvr"; depends=[ggplot2 lpSolve]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-7"; sha256="108wrbqj4c02c9cyv5m5xlswb1mlfdrhggb005sixr2dcqghb163"; depends=[Bessel corpcor ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; rmi = derive2 { name="rmi"; version="0.1.1"; sha256="1y0395l9lhskdrk3x9ps2dmv0sznsba0n6a9fmma33dc9dhywgf9"; depends=[BH Rcpp RcppArmadillo]; }; rminer = derive2 { name="rminer"; version="1.4.6"; sha256="1xydc43is756cy4vsm4k4micj88hhqgyrhb8cmvgv1y8zfrzg2qz"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; - rminizinc = derive2 { name="rminizinc"; version="0.0.6"; sha256="1b8x8h695pv963qm5xkss1kc97dcdzvzxzzjnijq1mgzrrr82cri"; depends=[checkmate R6 Rcpp rjson rlang rlist]; }; - rmio = derive2 { name="rmio"; version="0.2.0"; sha256="0g1sb5av8mw1b4absd5ydxrh93cp5k5x31kl6ghamx8i8irr1ngk"; depends=[]; }; + rminizinc = derive2 { name="rminizinc"; version="0.0.7"; sha256="159irpjgslrzm4lcdbzgsjkxw8790l72b2yiwkg0s9dnh09z0yi0"; depends=[checkmate R6 Rcpp rjson rlang rlist]; }; + rmio = derive2 { name="rmio"; version="0.3.0"; sha256="0gnd6n43waij1ikr1phv50wqk86zh0kgsdclkm159yr4hflqig01"; depends=[]; }; rmonad = derive2 { name="rmonad"; version="0.7.0"; sha256="1vjx8kk57xk7c2a05c6kn75n17842ya7j41hqj3wmgq8yvaxrngx"; depends=[digest glue igraph magrittr pryr]; }; - rmoo = derive2 { name="rmoo"; version="0.1.6"; sha256="1q2zs92ab1apxnk2j8afzglc0ch6c2dyfqmdglk8b941b2n0i78m"; depends=[cdata dplyr ecr ggplot2 plotly reshape2]; }; + rmoo = derive2 { name="rmoo"; version="0.1.7"; sha256="0dg6y9zvky5dy0b9948xdpg9cfbsczk0hm98lnl6wnikbvphijv4"; depends=[cdata dplyr ecr ggplot2 plotly reshape2]; }; rmpw = derive2 { name="rmpw"; version="0.0.4"; sha256="1a49rvdwvmccv4gfir48fw0b9jyrpc2q9zfyk5j9b7nxsx6x7abl"; depends=[gtools MASS]; }; rms = derive2 { name="rms"; version="6.2-0"; sha256="1di4xvsx0rwkr77nfqiysbg4qf699199xqil70i39d4zwfzqrm8h"; depends=[cluster digest ggplot2 Hmisc htmlTable htmltools lattice MASS multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; rmsb = derive2 { name="rmsb"; version="0.0.2"; sha256="1q9f539kgrj84117zlqlvlgv8hhk29lr504jznw7im49jczqvwcq"; depends=[BH cluster digest ggplot2 Hmisc knitr loo MASS Rcpp RcppEigen RcppParallel rms rstan rstantools StanHeaders survival]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="1.0.0.1"; sha256="18bpj7xh3kc7pl6ivi3cripam26bsaf9r9099cjf22qndvy18hb6"; depends=[dplyr magrittr PerformanceAnalytics purrr readr tbl2xts xts zoo]; }; - rmumps = derive2 { name="rmumps"; version="5.2.1-12"; sha256="142f8kf6qydh7qrdhs12836zri137f0b3vaq8kqmcvya07pviyr9"; depends=[Rcpp]; }; + rmt = derive2 { name="rmt"; version="1.0"; sha256="165cqnwqr0dx7b8dgq7xlfk4j55p9l6dr5b2rzyvfy5l23k4kckn"; depends=[]; }; + rmumps = derive2 { name="rmumps"; version="5.2.1-14"; sha256="1bl3wap6qjdryyrxqv85qnb9dv7xkx56c5y8qsaj2979748gwjjj"; depends=[Rcpp]; }; rmutil = derive2 { name="rmutil"; version="1.1.5"; sha256="1xmjmzws4wb0ksg4z4srzyk6mk2l1cr2ina9rznsdsyssr1ycxv0"; depends=[]; }; rmweather = derive2 { name="rmweather"; version="0.1.51"; sha256="0qd49lr12hc39dwg348b021aqxw57pfcb9xxhp51fvnw6gw6bgqd"; depends=[dplyr ggplot2 lubridate magrittr pdp purrr ranger stringr strucchange tibble viridis]; }; - rmytarget = derive2 { name="rmytarget"; version="2.1.8"; sha256="1sn1pncxnv2jgxhmbm4zlq6zyi8nsz90x8b7697qlqf2la837v96"; depends=[dplyr httr lubridate purrr stringr]; }; + rmytarget = derive2 { name="rmytarget"; version="2.3.1"; sha256="1z7gkv8kabwpx6idm7ds4xphbd7ngl7k8hl7ms84q5m7k7f2la6b"; depends=[dplyr httr lubridate purrr stringr tidyr]; }; rnassqs = derive2 { name="rnassqs"; version="0.5.0"; sha256="1mbkv32zidax9i6km93bbi3m7xpnsy805cz4ikdrid84qg94an09"; depends=[httr jsonlite]; }; rnaturalearth = derive2 { name="rnaturalearth"; version="0.1.0"; sha256="193b31a7n9jhc607mhwxbpx5gr0fpj3qasm9dbi6kcc7vac3ilgm"; depends=[sf sp]; }; rnaturalearthdata = derive2 { name="rnaturalearthdata"; version="0.1.0"; sha256="1z32j5lz2lb8xgpkr73majw22k0b49iazj6jjc7j4w9k4zxxa102"; depends=[sp]; }; - rnbp = derive2 { name="rnbp"; version="0.2.0"; sha256="135ab667k1k5jidik42yw0j4xr5ggqm9ikq42nhqllxqnkvvq0y5"; depends=[curl httr jsonlite]; }; + rnbp = derive2 { name="rnbp"; version="0.2.1"; sha256="0vphfxb262jryvvs48l21q3vxqicj51az0li38axg1mslshw0y4g"; depends=[curl httr jsonlite]; }; rncl = derive2 { name="rncl"; version="0.8.4"; sha256="0ss9jqrvv7bhvl5j74cjrp8r866d9dlavrbbfscwz3mhkgfx06bb"; depends=[progress Rcpp]; }; rneos = derive2 { name="rneos"; version="0.4-0"; sha256="07b3vb0h36ilwb8iylgppl8wpi84f583frmscpj236s1aihqwrmx"; depends=[RCurl XML]; }; rnetcarto = derive2 { name="rnetcarto"; version="0.2.4"; sha256="0fk5rym6zp049bl1f7bkl2231mjh3pgnxn0nhvmzpsah08rh4rr6"; depends=[]; }; rngSetSeed = derive2 { name="rngSetSeed"; version="0.3-2"; sha256="00mqjjkhbnvxqkf1kz16gipsf98q62vmhx9v8140qs7c4ljbhc3a"; depends=[]; }; rngWELL = derive2 { name="rngWELL"; version="0.10-6"; sha256="0pjjcs9pqj7mf0mhb2cwd0aanqpwnm65bm86hk6mi2vw8rgnj2vv"; depends=[]; }; - rngtools = derive2 { name="rngtools"; version="1.5"; sha256="0xgmg3qb6insc157as47mcm9sdjdpy9jirh7w06bxb7pfcxqfx42"; depends=[digest]; }; + rngtools = derive2 { name="rngtools"; version="1.5.2"; sha256="0kd7x214cqw7hzpmk1iqy1bn7j6x0ady0yz2hsdbclbq9k57d33z"; depends=[digest]; }; rngwell19937 = derive2 { name="rngwell19937"; version="0.6-0"; sha256="0m6icqf7nckdxxvmqvwfkrpjs10hc7l8xisc65q8iqpnpwl5p2f6"; depends=[]; }; rnn = derive2 { name="rnn"; version="1.4.0"; sha256="0k960jylbvg8r453430d8dpdzydkk3yr5np8rxkay79533ikrcgy"; depends=[shiny sigmoid]; }; - rnoaa = derive2 { name="rnoaa"; version="1.3.2"; sha256="0lfk4fvdr4nbsgndqgzla6syyv231nv99s42wal9qp6vjnykmdk6"; depends=[crul data_table dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; - rnpn = derive2 { name="rnpn"; version="1.2.1"; sha256="17l62nwcqm591hb0a9zvmsvyphxf66lwk0z918sbqkr1r9zzwm4f"; depends=[curl data_table httr jsonlite magrittr plyr raster rgdal sp tibble XML]; }; + rnoaa = derive2 { name="rnoaa"; version="1.3.4"; sha256="1yrasq4wgi5q783zyv00xxqzv0r8mrzdv9q7mkabawdmpxji3f1y"; depends=[crul data_table dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; rnrfa = derive2 { name="rnrfa"; version="2.0.4"; sha256="0sy64bgb94ksgcy37kmj61iphf66i0jpx0qlrcsr24zr92syc1n2"; depends=[curl ggmap ggplot2 httr jsonlite lubridate rgdal sp tibble zoo]; }; - roadoi = derive2 { name="roadoi"; version="0.7"; sha256="1y7hhhavf2dgwkvp5i8n7gr6viqmikgch0a91cchcfyskd8rr7n9"; depends=[dplyr httr jsonlite miniUI plyr purrr rlang shiny tibble tidyr]; }; + roadoi = derive2 { name="roadoi"; version="0.7.1"; sha256="1diprwir4agp2ifcgfsla1kd5m0y5cnc7ixhh6pqdvlgax5wx96w"; depends=[dplyr httr jsonlite miniUI plyr purrr rlang shiny tibble tidyr]; }; roahd = derive2 { name="roahd"; version="1.4.2"; sha256="1lq4aafag5cd9h6jffk6gv4m7v4p4y7wkdyxazw6fdwiqy8g4wvn"; depends=[dplyr magrittr robustbase scales]; }; - robCompositions = derive2 { name="robCompositions"; version="2.3.0"; sha256="0pzvcshjjjfwlzfbqyw0i1wm4lj4s227wnb7nx3z9aa0g3iqd89d"; depends=[car cluster cvTools data_table e1071 fda fpc GGally ggplot2 kernlab MASS mclust pls Rcpp RcppEigen reshape2 robustbase rrcov sROC tidyr VIM zCompositions]; }; + robCompositions = derive2 { name="robCompositions"; version="2.3.1"; sha256="13m03r2mcs6srn3hk46lrjhyv5px9jyvqsqbxri1h79f31bji58b"; depends=[car cluster cvTools data_table e1071 fda fpc GGally ggfortify ggplot2 kernlab MASS mclust pls Rcpp RcppEigen reshape2 robustbase robustHD rrcov tidyr VIM zCompositions]; }; robFitConGraph = derive2 { name="robFitConGraph"; version="0.1.0"; sha256="092nc0xnjs2zxd9ij0dl1xggb8mwl8nly284yjhhygmwlwsvhzxm"; depends=[MASS mvtnorm Rcpp]; }; + robber = derive2 { name="robber"; version="0.2.2"; sha256="053yiwjlsg7z9p5l60wddm1wf5wni54a28yp6x4hbfkgaazvby02"; depends=[blockmodels ggplot2 GREMLINS igraph magrittr pammtools partitions purrr]; }; robcbi = derive2 { name="robcbi"; version="1.1-3"; sha256="0rj732qdd0wd9d9pxldnsw5rif5d7wz327iydvxcf5x8lgvk42jd"; depends=[robeth]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; + robcp = derive2 { name="robcp"; version="0.3.2"; sha256="081dxq8hcaa7xdz6n5ri4lchx30ma7c844bcirkankkmpz73igcv"; depends=[Rcpp]; }; roben = derive2 { name="roben"; version="0.1.0"; sha256="18k0h1y2xhvdssg28b9s4whn3kcbdgkz55dp1y3rrczw8xrm54mm"; depends=[glmnet Rcpp RcppArmadillo]; }; robeth = derive2 { name="robeth"; version="2.7-6"; sha256="1x0hzgq7jwl83wwmy581ia8009v0j95aksnr5ywpflnqm76rj6v2"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1.2"; sha256="0mvpaf6g694b7175bl3yr6lxbwla4pwp7g4y34qb4klgl5n3nw03"; depends=[lattice MASS robustbase]; }; robin = derive2 { name="robin"; version="1.0.3"; sha256="1axn687pc6ym5lbrqhsfjw9h5p5famgzqp3q505drysn33fv6nlw"; depends=[DescTools fdatest ggplot2 gprege gridExtra igraph networkD3 qpdf]; }; - robis = derive2 { name="robis"; version="2.3.9"; sha256="1pz8904zhif1d02q6ar7winf313j3bjzxlaqsnbczxjjchs6j2g3"; depends=[dplyr ggplot2 httpcache httr jsonlite leaflet mapedit rlang sf tibble tidyr]; }; - robmed = derive2 { name="robmed"; version="0.8.0"; sha256="11gzs20jdsishn723bpvalnbs69jv1cysgsqcgjm3i60xcsfz5pl"; depends=[boot ggplot2 quantreg robustbase shiny sn]; }; - robmixglm = derive2 { name="robmixglm"; version="1.2-1"; sha256="1ikkg5dyyaj0jq7zwg6xdsyvyr9i7cqsv0nkpkj8jgm89g8yisv2"; depends=[actuar bbmle boot doParallel doRNG fastGHQuad foreach MASS numDeriv Rcpp VGAM]; }; - robomit = derive2 { name="robomit"; version="1.0.5"; sha256="15w6ryny42h4kv5lfma8mdhdlk6g4kpinw6rq2bkgympzki37h5z"; depends=[broom dplyr ggplot2 plm tibble tidyr]; }; + robmed = derive2 { name="robmed"; version="0.9.0"; sha256="0xjq97jy72hcc03s7z5ckl4f9jwsy2sbhwsr8r7hxgrcc8g1zvwf"; depends=[boot ggplot2 quantreg robustbase shiny sn]; }; + robmixglm = derive2 { name="robmixglm"; version="1.2-2"; sha256="117dhnnj55hihpzim45dw3cjm4ma6w21d8j77fybyri2bmpvlypa"; depends=[actuar bbmle boot doParallel doRNG fastGHQuad foreach MASS numDeriv Rcpp VGAM]; }; + robomit = derive2 { name="robomit"; version="1.0.6"; sha256="1yma6m4bxy3hikc9kx7mslqgq1fpi4my7qij9pz77ag836r9hcxm"; depends=[broom dplyr ggplot2 plm tibble tidyr]; }; robotstxt = derive2 { name="robotstxt"; version="0.7.13"; sha256="1x5sachf7g5c2aj1mg3z2lf60723k1ad80bdr89szkgi92jkfal7"; depends=[future future_apply httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; robregcc = derive2 { name="robregcc"; version="1.1"; sha256="06fapmc3jfrfdqvz02jr12dk1d5iw6s3mcb13jz1nm2bybw6r04a"; depends=[magrittr MASS Rcpp RcppArmadillo]; }; + robsel = derive2 { name="robsel"; version="0.1.0"; sha256="0vf9hry11hf6bi4pz18c6gh9janx0v6shm2m14kckscvh80z3k5b"; depends=[glasso Rcpp RcppEigen]; }; robservable = derive2 { name="robservable"; version="0.2.0"; sha256="05j65ds1yclsa3d7s632wcaylh5ig9w5pwz71ffz5h0f4wgf87jz"; depends=[htmlwidgets jsonlite]; }; robslopes = derive2 { name="robslopes"; version="1.0.2"; sha256="04767ggjjsgm31ysk5xw8jvdnjdbk4fmrrsi83ksz746kl0xafzp"; depends=[Rcpp RcppArmadillo]; }; robsurvey = derive2 { name="robsurvey"; version="0.1.1"; sha256="0rf2sd7maz565hlgpyhvkswqyck01hif4mg5isbnnky9n3nc98pi"; depends=[survey]; }; @@ -14614,16 +15226,15 @@ in with self; { robustBLME = derive2 { name="robustBLME"; version="0.1.3"; sha256="18wx116l1riy4wn4083kxl637mkyyi9wbwnmvhkgqw3vb36s4vxd"; depends=[doParallel foreach iterators lme4 mvtnorm numDeriv Rcpp RcppArmadillo]; }; robustDA = derive2 { name="robustDA"; version="1.2"; sha256="0kxdqvv17dgnlqp0hkazwfqsg3h4g9gw1w57blwpay67xp4d1jyx"; depends=[MASS mclust Rsolnp]; }; robustETM = derive2 { name="robustETM"; version="1.0"; sha256="1dlj79v08bls500lb81rya6vwx58h97rpq1sy9zwd3mfl9b6awp9"; depends=[]; }; - robustHD = derive2 { name="robustHD"; version="0.6.1"; sha256="0h2kdw8xkyflczwfq48cfdal0ccvil8dsq4xpnw7qfmjyvkycnxp"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; }; - robustMVMR = derive2 { name="robustMVMR"; version="0.1.0"; sha256="10cidj5q707xy2x2g0vynbdhz84k6amc3svk3x7rgx4jcv55yr6a"; depends=[ggplot2 lmtest robustbase]; }; - robustSingleCell = derive2 { name="robustSingleCell"; version="0.1.1"; sha256="1rxjw5rwp20ssjgq26ajrbipqfjblmsgf87jgx7xa41mgmhwaq51"; depends=[biomaRt cccd dplyr GGally ggplot2 ggpubr ggrepel gplots igraph limma Matrix RANN RColorBrewer Rcpp reshape2 rslurm Rtsne scales]; }; - robustX = derive2 { name="robustX"; version="1.2-4"; sha256="02476pl6gnv1sgp5qywlm79gkaxlghms2c1arj4b16r0gz0g230r"; depends=[robustbase]; }; + robustHD = derive2 { name="robustHD"; version="0.7.0"; sha256="1z8jd2lqzjwyx16m3fk3pc3k1p60wzfaila06pnrq646qjdh60nj"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; }; + robustX = derive2 { name="robustX"; version="1.2-5"; sha256="1l8ap69aljr3d28512d15hf53bxzfdk6q4ab59z63nr053rfxa4f"; depends=[robustbase]; }; robustarima = derive2 { name="robustarima"; version="0.2.6"; sha256="137x9w3fq523bw2wix7bwc255mq7kvqa047chcnb2prihn9d6as7"; depends=[splusTimeDate splusTimeSeries]; }; - robustbase = derive2 { name="robustbase"; version="0.93-7"; sha256="0mh9d114p3jdrjf8yn4dx5ff41niz5wn411y0ckjcpnazp8d44c9"; depends=[DEoptimR]; }; + robustbase = derive2 { name="robustbase"; version="0.93-8"; sha256="16fmnk3p32mi70rkx89l1v4pry3gnrpy9jicnlfnk6lg1pwz5j8w"; depends=[DEoptimR]; }; + robustcov = derive2 { name="robustcov"; version="0.1"; sha256="1bgvf9h727aqfb11q976y2ybp3mpghkyd29waypyfp95csp3cf26"; depends=[caret glasso Rcpp RcppArmadillo]; }; robustfa = derive2 { name="robustfa"; version="1.0-5"; sha256="04nk5ipml54snsmiqf5sbhx490i46gnhs7yibf4wscrsj1bh2mqy"; depends=[rrcov]; }; robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; }; robustlm = derive2 { name="robustlm"; version="0.1.0"; sha256="17l2kr9dc3z02b2jswfxal13md4xfpz4sqjfg6kyg6ilab1cfd06"; depends=[MASS matrixStats]; }; - robustlmm = derive2 { name="robustlmm"; version="2.4-3"; sha256="1jmq3ipzhjswgxrg02g2nbldfygk20hdjh9fhnrwidjr98582wab"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; + robustlmm = derive2 { name="robustlmm"; version="2.4-4"; sha256="1451v7zjnaj0ynnvq1ybkfggxjnzb890fwxxhs6rma8sdmrp6rw6"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; robustrank = derive2 { name="robustrank"; version="2019.9-10"; sha256="1xikknrmnh95wpvyljdl7v510ddi1g7a88aw3l630s789nq5i02h"; depends=[kyotil]; }; robustrao = derive2 { name="robustrao"; version="1.0-5"; sha256="1r8v9qjx70s8swh09imq9kzdxg0qhnmk00zrg939mig9b12mw1p6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-11"; sha256="08c6dyzki68hzl006s12bkjiirlw2n2isirjh8b79sd6zjrjlh72"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -14633,27 +15244,31 @@ in with self; { rocTree = derive2 { name="rocTree"; version="1.1.1"; sha256="1hd5v47gymffg5829swpd38xscm4vq75d46fibwkrr7jp9iy37ra"; depends=[data_tree DiagrammeR flexsurv ggplot2 MASS Rcpp RcppArmadillo survival]; }; rocc = derive2 { name="rocc"; version="1.3"; sha256="1j15l28c7kv7x850ycjprqi5gpbsl6wfv97h9lbrx11q5l4r9ivb"; depends=[ROCR]; }; roccv = derive2 { name="roccv"; version="1.2"; sha256="18kq2gzcbz97dw168xppql8k3slpkfl8yv1d8ac48damlhvipif1"; depends=[glmnet pROC]; }; + rock = derive2 { name="rock"; version="0.4.3"; sha256="0rnvjjl1w0d5x688za63yj2dnldr988529h05rpbhyg6gwfgq42a"; depends=[data_tree DiagrammeR DiagrammeRsvg dplyr ggplot2 glue htmltools markdown purrr yaml yum]; }; rockchalk = derive2 { name="rockchalk"; version="1.8.144"; sha256="07dp1n155b9gfvk8l30h6bhjbhbylsjxfzns08mryn4mxj3nqpnb"; depends=[carData kutils lme4 MASS]; }; rockr = derive2 { name="rockr"; version="1.0.0"; sha256="190xaxcbb7miqw5mxyfqqlb2vzacifc8a7a3cqfdlpxra4d4jc25"; depends=[httr jsonlite mime progress]; }; + roclang = derive2 { name="roclang"; version="0.1.0"; sha256="0a3qx56jgh0xakdq49rmk32nv4v6j5ax8g0zriay3hjmywccsj0d"; depends=[dplyr magrittr purrr rex rlang roxygen2 stringr tibble tidyr]; }; rococo = derive2 { name="rococo"; version="1.1.7"; sha256="1fp3kk5j9kc0vyr50rlbsxjc9p3qz5137sifxsbd297p7zj1fcs2"; depends=[Rcpp]; }; rocsvm_path = derive2 { name="rocsvm.path"; version="0.1.0"; sha256="1pd59bzcz96sxpp725pqa7pjh2gdrfapbilp4wccjkf5290zw56v"; depends=[quadprog svmpath]; }; rodd = derive2 { name="rodd"; version="0.2-1"; sha256="01zrkw4lr21vxk2grfc37iyrcipfdcj5m0i7gnxsvs435y9fqagd"; depends=[Matrix matrixcalc numDeriv quadprog rootSolve]; }; rodeo = derive2 { name="rodeo"; version="0.7.7"; sha256="1cfsf6sld72bm1343p6fzpfwq7a976basf3fg5fqsj2rcx6b1q7b"; depends=[deSolve R6]; }; + roger = derive2 { name="roger"; version="0.99-0"; sha256="1a5cvvaiw2xynbj1anp6nxwkpg2igflvg77dxdcjlrv7dcf6lwnf"; depends=[]; }; roistats = derive2 { name="roistats"; version="0.1.1"; sha256="1278cap5il85s1qls3sc0f4gqq2hi80442qidnsc6d8r3l4ba3fr"; depends=[dplyr magrittr purrr rlang tidyr]; }; roll = derive2 { name="roll"; version="1.1.6"; sha256="1crzr0kqdls08n6i3769zrxbxvh2m4hv5k3xi6ky6ps8hhicwqc9"; depends=[Rcpp RcppArmadillo RcppParallel]; }; rollRegres = derive2 { name="rollRegres"; version="0.1.3"; sha256="1rf6hdbndindq6kr5yzyqq4jy1c11shfdvjb8mwm957dd0kbs3rx"; depends=[checkmate Rcpp RcppArmadillo]; }; rollbar = derive2 { name="rollbar"; version="0.1.0"; sha256="1q2ym0vkgbdnibxmwx0bp9c20g3bm8fzwwgs3j4bxg1ydg3gnkj4"; depends=[httr]; }; rolldown = derive2 { name="rolldown"; version="0.1"; sha256="1awr8lcxz7y9mjhia4p85jvixc72gj525gk2jjl13njgq6shp0b5"; depends=[bookdown htmltools jsonlite]; }; + rollinglda = derive2 { name="rollinglda"; version="0.1.0"; sha256="13lpjamki3yk0ngfkzx985y04ahj8762slji29vjrlcc72lsmgd5"; depends=[checkmate data_table ldaPrototype lubridate tosca]; }; rollmatch = derive2 { name="rollmatch"; version="2.0.2"; sha256="1bm1yc2z9byj4m9gz0il47y8drd3qzsb5lwb22a22axy306lqfqj"; depends=[dplyr magrittr]; }; roloc = derive2 { name="roloc"; version="0.1-1"; sha256="0xynj12gp010c23f6ll9p343vwgxwa22s771p1w2pi65cj2ixhas"; depends=[colorspace]; }; rolocISCCNBS = derive2 { name="rolocISCCNBS"; version="0.1"; sha256="100jh5m2c1zp5wg3wd4y2i47dzx1j0g6lfwyqmwk4bz99yzzz5am"; depends=[colorspace roloc]; }; rolr = derive2 { name="rolr"; version="1.0.0"; sha256="04nm4q0mlr4w6jb0frykzlyknfn3gn02ysqr5ll5jch6wawichy2"; depends=[survival]; }; - rolypoly = derive2 { name="rolypoly"; version="0.1.0"; sha256="11nf7in6n03675l11ynl4rp20rlzy7jli3m518s4sqqxdm8f8ci7"; depends=[data_table dplyr foreach ggplot2 glmnet MASS Matrix matrixcalc]; }; - rootSolve = derive2 { name="rootSolve"; version="1.8.2.1"; sha256="0c9hhgq1pgqdg80a6n2ssfbj5nyaf97y4iiya7j7l6b34qc53128"; depends=[]; }; + romic = derive2 { name="romic"; version="1.0.0"; sha256="08iqk71bn4yjxnbwj99jbrz3028jjs8f07ns9r9iaj6byyxv4vd1"; depends=[checkmate dplyr ggplot2 glue purrr readr reshape2 rlang shiny stringr tibble tidyr]; }; + rootSolve = derive2 { name="rootSolve"; version="1.8.2.2"; sha256="1p7nh09g2815vqpvi6c5vvjshkwjn00nx5d3gdyjs304q5312q0a"; depends=[]; }; rootWishart = derive2 { name="rootWishart"; version="0.4.1"; sha256="1l9pr3i20hi5k02qnlb3blxhlvp2j0njn74xslw3gcjvyzjlr12j"; depends=[BH Rcpp RcppEigen]; }; roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; - ropenblas = derive2 { name="ropenblas"; version="0.2.9"; sha256="0s2cf4clv61m65k353cxgls36jaqrlxzr89jidpr0z3vrda5nb99"; depends=[cli fs getPass git2r glue magrittr pingr RCurl rlang rstudioapi stringr withr XML]; }; + ropenblas = derive2 { name="ropenblas"; version="0.2.10"; sha256="1709kk63d8xv923phadnk30pc895syf4rmfip7v9y3cn734ww38g"; depends=[cli fs getPass git2r glue magrittr pingr RCurl rlang rstudioapi rvest stringr withr XML]; }; ropendata = derive2 { name="ropendata"; version="0.1.0"; sha256="1bv6y241abs6pb4wq5ybx9x4zh72kf8ffs3vlcgdsmhw4jwrsxdl"; depends=[httr jsonlite]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; roperators = derive2 { name="roperators"; version="1.1.0"; sha256="0klmk1jmh1iysgf345qa6qyjmn1pkz072ha254k90flprgicg7c6"; depends=[]; }; @@ -14668,7 +15283,7 @@ in with self; { rosetteApi = derive2 { name="rosetteApi"; version="1.14.4"; sha256="166p3dvib0xpvhkb92b3imassv1b9mrblz2m05jai2nzlz0q7hzk"; depends=[httr jsonlite]; }; rosm = derive2 { name="rosm"; version="0.2.5"; sha256="10n3yzhk29i3mzbcg6nkjqgvwc9n53ax0d7imn9l4a9msa06as07"; depends=[abind curl jpeg plyr png prettymapr rgdal rjson sp]; }; rospca = derive2 { name="rospca"; version="1.0.4"; sha256="1pxm34xsc2610n0i6dwcm4rhn016yqb03f8vrm93r7285c04n4q7"; depends=[elasticnet mrfDepth mvtnorm pcaPP pracma robustbase rrcov rrcovHD]; }; - rotasym = derive2 { name="rotasym"; version="1.1.0"; sha256="1h5wg87p6svmwzlw58by2rp5cxw0bgq6cp48g9z1ajcpy048591n"; depends=[Rcpp RcppArmadillo]; }; + rotasym = derive2 { name="rotasym"; version="1.1.2"; sha256="068p8z6qs65b63sdi2rmr7kjc8s4yc8dd8gnpwfig2qsj8wgd7r2"; depends=[Rcpp RcppArmadillo]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; rotations = derive2 { name="rotations"; version="1.6.2"; sha256="1r42lgy4f6mblz29hvy7s166yk2s4k8x03snh7yy97g7falmh718"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo sphereplot]; }; rotl = derive2 { name="rotl"; version="3.0.11"; sha256="0b0wr795qicb8k1m4ng0kx9alc88davhdr3kar4ynjblaavz16rk"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; @@ -14676,24 +15291,23 @@ in with self; { round = derive2 { name="round"; version="0.20-0"; sha256="1c403i57fwfh3pz6ksg5ws2fydq8zf2fk4x6r9d0xqn0fs7px7j4"; depends=[]; }; roundhouse = derive2 { name="roundhouse"; version="0.0.2"; sha256="0xx2wai9pdq0g7x8xmwlf48wxv4v18c7ymzvzxpvw1gggppmbk69"; depends=[]; }; routr = derive2 { name="routr"; version="0.4.0"; sha256="1vswq7vm80nwb50grr4cs290kbq5lx9b19dq0c2wlp9d2dxk50si"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; - roxut = derive2 { name="roxut"; version="0.2.40"; sha256="1j3viqs8miigc6n6fdmm0bci84lajqcra3d5qm7pd6n2wcpvh7nh"; depends=[roxygen2]; }; - roxygen2 = derive2 { name="roxygen2"; version="7.1.1"; sha256="0qc8akwfwmaqsjaza87f5fi0zk6sh3l6j3assbs6chvx0gnmvidx"; depends=[brew commonmark desc digest knitr pkgload purrr R6 Rcpp rlang stringi stringr xml2]; }; + roxut = derive2 { name="roxut"; version="0.4.0"; sha256="1ciflhmavl24wk4kjbilmm70q6z8i02m36x4pyh4m3czhnpyyv03"; depends=[roxygen2]; }; + roxygen2 = derive2 { name="roxygen2"; version="7.1.2"; sha256="1zf55wywlpy7mk7zfyi3s9fhhg1m9kvafzj46iqw5cbvnlg3ssdk"; depends=[brew commonmark cpp11 desc digest knitr pkgload purrr R6 rlang stringi stringr xml2]; }; roxygen2md = derive2 { name="roxygen2md"; version="1.0.0"; sha256="1gvrfy0sk5qi8d93zxj5f7xgnnw0w38zyxdik4ckf0pkk0zdm27a"; depends=[desc devtools enc rex rlang tibble usethis withr]; }; roxytest = derive2 { name="roxytest"; version="0.0.1"; sha256="166m0pklgryh3vildg0bvzh9gs3p71sf61ivgkvkvyy9vhvnp3jf"; depends=[roxygen2]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; - rpact = derive2 { name="rpact"; version="3.0.4"; sha256="0d1qg0sgf366irpi3022vivrj04bp68zw8idfknr4r3lq6ym7h7s"; depends=[Rcpp]; }; - rpanel = derive2 { name="rpanel"; version="1.1-4"; sha256="0yzasb4k5jcx3wfsll9k9alyrwc0l1x6pk91nj7cqrdiapw8j519"; depends=[]; }; + rpact = derive2 { name="rpact"; version="3.1.1"; sha256="1n88mqi856cfn8hn6wy9m398fc0gnxc4zqyy81fyd3kxmhs6f1a7"; depends=[Rcpp]; }; + rpanel = derive2 { name="rpanel"; version="1.1-5"; sha256="0656hxj17arjma8sk0xrjicv6mh7iyxhrvj36q4wdvxwlrvm76p3"; depends=[]; }; rpart = derive2 { name="rpart"; version="4.1-15"; sha256="0p5frya963ppn476p5dxs2mnarsalksr6gw9zzmjsn8ikq7bx3ib"; depends=[]; }; rpart_LAD = derive2 { name="rpart.LAD"; version="0.1.2"; sha256="1v1arv5b02n0jvyifb5km9w3z3wxg9x9g3g4xck4s319z5g6lp7n"; depends=[Rcpp rpart]; }; - rpart_plot = derive2 { name="rpart.plot"; version="3.0.9"; sha256="190mh2ia78x7cj925sqs6v441lrskkcpqqb0f6qk2fwvi7lzal0i"; depends=[rpart]; }; + rpart_plot = derive2 { name="rpart.plot"; version="3.1.0"; sha256="0pn1fkhpv4dkhh7057kjiwmzzrsfsw58n945j357mhdvrb0a1ara"; depends=[rpart]; }; rpart_utils = derive2 { name="rpart.utils"; version="0.5"; sha256="00ahvmly6cdf7qhhcic0dbjlljqq8kbhx15rc7vrkd3hzd55c0im"; depends=[rpart]; }; rpartScore = derive2 { name="rpartScore"; version="1.0-1"; sha256="15zamlzbf6avir8zfw88531zg5c0a6sc5r9v5cy9h08ypf34xf4y"; depends=[rpart]; }; - rpartitions = derive2 { name="rpartitions"; version="0.1"; sha256="1gklsi4pqhk16xp9s49n1lr9ldm1vx61pvphjqsqkzrlxwcpx3j8"; depends=[hash]; }; rpatrec = derive2 { name="rpatrec"; version="1.0.1"; sha256="0zj461frf6n5s97zq7r52q0blsn2xq2759impgz6v4pr87gmq0si"; depends=[np]; }; rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; rpdo = derive2 { name="rpdo"; version="0.3.1"; sha256="0yhg858i5a6s68000a74l4gldycbfmcwcvkk5zhjqzpxzdm7pqb2"; depends=[chk lifecycle]; }; - rpf = derive2 { name="rpf"; version="1.0.7"; sha256="04n605h091d6nijbbhar79zj7gfkymb6pp7v1496avzajy483klw"; depends=[lifecycle mvtnorm Rcpp RcppEigen]; }; + rpf = derive2 { name="rpf"; version="1.0.8"; sha256="039r6yz2ax7i9sv8vi98yg7llwb966ay6mrifpmp6q3xh1f634kl"; depends=[lifecycle mvtnorm Rcpp RcppEigen]; }; rphylopic = derive2 { name="rphylopic"; version="0.3.0"; sha256="088aafylypsaxfl903qhi8kigkchmdzndibxic4sgiycry6xvxrz"; depends=[crul ggplot2 gridBase jsonlite png]; }; rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; }; rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; @@ -14701,14 +15315,13 @@ in with self; { rplos = derive2 { name="rplos"; version="1.0.0"; sha256="0gl336cqy96npkkh9g6gsaqyyk1sn93xbybv09lm8xih36qlr0b0"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; rplotengine = derive2 { name="rplotengine"; version="1.0-7"; sha256="1bbciq84l0h6g4qajlcqg3v66g2rspflv6k7x5h5qzwlcb4p4dps"; depends=[xtable]; }; rpls = derive2 { name="rpls"; version="0.6.0"; sha256="0r3y63pi4d7hfzs53d9w23ymmk86gvm85v0dx7n1gicha5nn1mk8"; depends=[pcaPP robustbase]; }; - rplum = derive2 { name="rplum"; version="0.2.0"; sha256="1wjfzhds355fsmdyzkvcdr501p1cjarh9dscx5d2f4nvj07mn5b9"; depends=[coda rbacon Rcpp]; }; - rpmodel = derive2 { name="rpmodel"; version="1.0.4"; sha256="1rbygxk6dbi3pqxri5myc7f3y04haa0slpiaa330malg3dw5a9gc"; depends=[rlang]; }; - rpms = derive2 { name="rpms"; version="0.4.0"; sha256="10zw0xln0vjrzrilyn67nnw13aadnskzca1930fvb483c691bm36"; depends=[Rcpp RcppArmadillo]; }; + rplum = derive2 { name="rplum"; version="0.2.2"; sha256="119gs1g45gl985nrvps438z4zhzwqqv6yvqzddvpz8zhsbfzgpa7"; depends=[coda rbacon Rcpp]; }; + rpmodel = derive2 { name="rpmodel"; version="1.2.0"; sha256="131kzag51r1fpa63xzj77b9hh4b1723lc424ch8dhbrcdrnjh730"; depends=[]; }; + rpms = derive2 { name="rpms"; version="0.5.1"; sha256="1y686da4ylv403gbfx43yaa2i2zdcgdv9p1zmlq05dvbkjkvlvw9"; depends=[Rcpp RcppArmadillo]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; rportfolio = derive2 { name="rportfolio"; version="0.0.3"; sha256="1pj08qz1qmdcyxp629lyfggbgzr36wrjir0fj6hpgf5zm588bqiy"; depends=[xts zoo]; }; rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; }; rpostgis = derive2 { name="rpostgis"; version="1.4.3"; sha256="04x5qdz0kznxnp9kygp0m2rjxyhqfz3mc81mcr4aw6cy5p4zp9aq"; depends=[DBI raster rgeos RPostgreSQL sp]; }; - rppo = derive2 { name="rppo"; version="1.0.1"; sha256="182na7mcvgjqbna3v5hw58z6q9k8n0987b8ipz0d138zxaq45474"; depends=[httr jsonlite plyr readr]; }; rpql = derive2 { name="rpql"; version="0.8"; sha256="0iljs08pjnk4b08mgryzn70rxva723bk1hi3wyizx05lls2n8ly7"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; rpredictit = derive2 { name="rpredictit"; version="0.0.2"; sha256="1gsfcs5l83p4x0glhnq5hidh5rxwipklsj0nzkxaim65w9kqgx30"; depends=[dplyr DT dygraphs httr jsonlite magrittr quantmod shiny stringr xts]; }; rprev = derive2 { name="rprev"; version="1.0.5"; sha256="0494z0049rxahs4ndjlclzfc65k304a1m01cdlhjg4rz1gc1vrr8"; depends=[data_table dplyr ggplot2 lazyeval lubridate magrittr survival tidyr]; }; @@ -14716,19 +15329,18 @@ in with self; { rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; rprojroot = derive2 { name="rprojroot"; version="2.0.2"; sha256="07wy07yhms8zln9qb0iwx69dq08h4lrdi8kavjcplfxcskq638az"; depends=[]; }; rpsftm = derive2 { name="rpsftm"; version="1.2.7"; sha256="0ncf9ci39pd7p048cgvhl6phhk975xwyjm4aqs1b4hjy1nml4iz2"; depends=[ggplot2 survival]; }; - rpst = derive2 { name="rpst"; version="1.0.0"; sha256="10cbgj67lqgh5bawwa0nwj9kfl3jg4vdm121kc61q199v8dw7nrz"; depends=[plotrix survival]; }; rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; rptR = derive2 { name="rptR"; version="0.9.22"; sha256="0vvjc6qiq71d5wckl77z606q1fp43mgrfzp1bxcab96n5whb2r9k"; depends=[lme4 pbapply]; }; rpubs = derive2 { name="rpubs"; version="0.2.2"; sha256="18cnzhcvm7gx4k01ysqay53smrf8xqlbaszq41mny5c7qqh1fvpz"; depends=[rvest xml2]; }; rqPen = derive2 { name="rqPen"; version="2.2.2"; sha256="077kdvfdyp5h8630k8jigbz8mfyby8vkjiqxpqv0wfi6cqcjlaf2"; depends=[quantreg regpro]; }; - rqdatatable = derive2 { name="rqdatatable"; version="1.2.9"; sha256="0152df81bsqvbxz0g16bk3j2m0vjxli58yi3191mnlx7ff587ac6"; depends=[data_table rquery wrapr]; }; - rquery = derive2 { name="rquery"; version="1.4.6"; sha256="1a0rwhjcf93i48pg8zjnp3xwv0mawk2fcir03w9bqgqz290cq3n5"; depends=[wrapr]; }; + rqdatatable = derive2 { name="rqdatatable"; version="1.3.0"; sha256="0q10fi6xvw7495yrv6y8zzda31xyl6nbinq0dn2brfjp66w864k7"; depends=[data_table rquery wrapr]; }; + rquery = derive2 { name="rquery"; version="1.4.7"; sha256="0m57y5wfg1mvla4d6a8mnxnhz973k1nvz899rbxnxaqfa7azxp62"; depends=[wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rr2 = derive2 { name="rr2"; version="1.0.2"; sha256="099vjg91ni2bnxlra18pvgsvzrl28zrj639cdjrh3wkpqv99d04q"; depends=[ape lme4 Matrix nlme phylolm]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6.1"; sha256="1ny48ra25rzx3k69pmzpd31ka2zhqyqiq1v7ann862j3ris0w8z9"; depends=[]; }; rrapply = derive2 { name="rrapply"; version="1.2.3"; sha256="042b7q94lrprxxcyjw8cn3y20dxvq77yk0cihn2xk885gawhwxm6"; depends=[]; }; rrat = derive2 { name="rrat"; version="1.0.0"; sha256="1j1jd32pgggn5cqv66l63sw5p4hblgpznf33wd0zdbfapwy8rx4r"; depends=[quantreg]; }; - rrcov = derive2 { name="rrcov"; version="1.5-5"; sha256="0ag6q16ajkqwj28dk9vp4xkvqw26fqqqdxnz38gpszilirahfzqz"; depends=[lattice mvtnorm pcaPP robustbase]; }; + rrcov = derive2 { name="rrcov"; version="1.6-0"; sha256="0i69gv55c86gkclwhch0jzdfyb20l20mx1nx1xp9qz71nd4klpvr"; depends=[lattice mvtnorm pcaPP robustbase]; }; rrcov3way = derive2 { name="rrcov3way"; version="0.1-18"; sha256="1gpjmmdca2waqks0qykj59p50v6pf1zgl81m5lhbrhpcr4rdr63l"; depends=[nnls robustbase rrcov]; }; rrcovHD = derive2 { name="rrcovHD"; version="0.2-7"; sha256="1srxgw5qcgpmxqfplvbrlryxvkx0mic5y7v5lxgfvqvlmcb3rm3f"; depends=[pcaPP pls Rcpp robustbase robustHD rrcov spls]; }; rrcovNA = derive2 { name="rrcovNA"; version="0.4-15"; sha256="0r60chxm7bpc6sis60rp8k8xchwfrfa3lrfaidvv22ipx2q0psp7"; depends=[cluster lattice norm robustbase rrcov]; }; @@ -14736,12 +15348,11 @@ in with self; { rrecsys = derive2 { name="rrecsys"; version="0.9.7.3.1"; sha256="1qnjriv1xq4gjjhzz8jxrbk88mw5xddl2l2i4bmfhnxhi51d2rk3"; depends=[ggplot2 knitr MASS Rcpp registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; rredlist = derive2 { name="rredlist"; version="0.7.0"; sha256="1w77cnfrybmqnadsmfkpjv5m49kkr7yc6kcqq165lmj3bijnprnj"; depends=[crul jsonlite]; }; - rrefine = derive2 { name="rrefine"; version="1.1.0"; sha256="0hbpblvabvv8z539dy2v93j3glnp3zsfzlg7m0k5b797l1z8xb46"; depends=[httr readr rlist]; }; + rrefine = derive2 { name="rrefine"; version="1.1.1"; sha256="0ma564psvb5s79cixm9gq8ki2aby4fsm321rc1m10nci6dd90q4p"; depends=[httr readr]; }; rreg = derive2 { name="rreg"; version="0.2.1"; sha256="05c2yj58zn43zkmqp4iyblsixsq76hsjkchffl5rkqynvgxi0qzi"; depends=[directlabels ggplot2]; }; rrepast = derive2 { name="rrepast"; version="0.8.0"; sha256="1x8xda9cndxri2hhd2ihxmjjy0x74r0dh3953dfh7gvj4slaf0rl"; depends=[digest doSNOW foreach ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; rres = derive2 { name="rres"; version="1.1"; sha256="138m26ya119805b1akwski0hf1ypiqsqjlkrm9p0l2x22zrv1n60"; depends=[kernlab Rcpp]; }; rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.2"; sha256="1d9dwgw8la8wwq9cdnl7qibkzbdl4cj0qvf05x7w13ip973dwpaq"; depends=[eha mc2d msm tkrplot]; }; - rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; rroad = derive2 { name="rroad"; version="0.0.5"; sha256="09q5r9wq3vm5wy5aigx9wffv7m0njlp3sma1djm6cp7hhwgss0nj"; depends=[]; }; rromeo = derive2 { name="rromeo"; version="0.1.1"; sha256="1jjk5b41qg22a0zpjha2p2mfcb5q00gicqlxhkahjbj49q0c3mn9"; depends=[httr xml2]; }; rrpack = derive2 { name="rrpack"; version="0.1-11"; sha256="1bchha6dbkgc1raiks22cjmqzsias0c0frz8il67napkgmwlqk6d"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; @@ -14750,22 +15361,23 @@ in with self; { rrtable = derive2 { name="rrtable"; version="0.2.1"; sha256="1hblrxn7vixcp32j3cij0xrkzvk31agi9dqgxrimcrzs7gjcd1j5"; depends=[devEMF editData flextable ggplot2 ggpubr magrittr moonBook officer purrr readr rlang rmarkdown rvg shiny shinyWidgets stringr ztable]; }; rrum = derive2 { name="rrum"; version="0.2.0"; sha256="0w0f2n14if2b8x7n6v8y8q2vghd8j7xm1xhpxnvy3z50flinwgm7"; depends=[Rcpp RcppArmadillo rgen simcdm]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; - rsample = derive2 { name="rsample"; version="0.0.9"; sha256="03qwsvylgmj2a2h764mzy0x57pgzmvjvl0ypmbn4lcf912bvrd2c"; depends=[dplyr ellipsis furrr generics purrr rlang slider tibble tidyr tidyselect vctrs]; }; + rsample = derive2 { name="rsample"; version="0.1.0"; sha256="00w8r0p499fm8cyw297gznr83mbgy9a3znzpbgj0zq9dry1a266b"; depends=[dplyr ellipsis furrr generics lifecycle purrr rlang slider tibble tidyr tidyselect vctrs]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; rsbp = derive2 { name="rsbp"; version="0.1.0"; sha256="0aardngvj9apn8q5vhfpv67rf7d5iqb7xdq7rh8xmgr8341fvbgc"; depends=[dplyr lubridate magrittr purrr reshape2 tibble tidyr xml2]; }; rscala = derive2 { name="rscala"; version="3.2.19"; sha256="1wq0wrdbh0gi0bx4m9526qlbjm7nxxqgc17ikdx5mrhcy2f61hjk"; depends=[]; }; + rscc = derive2 { name="rscc"; version="0.1.0"; sha256="1l5dwlwkfww97nwwdlcqla9cbsip8p3wqdi0a5z14ngznkzy3n4k"; depends=[crayon formatR highlight igraph]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; - rsconnect = derive2 { name="rsconnect"; version="0.8.17"; sha256="0cd2bpc22jam1qxn6yg7yr7xdhsm0jgnm5bm2f3vg5b3c96plxk4"; depends=[curl digest jsonlite openssl packrat rstudioapi yaml]; }; + rsconnect = derive2 { name="rsconnect"; version="0.8.24"; sha256="19p4w9dmhsl1vdvwv3hfmd5qzf4296g0x878idfajvrx0wgfysyg"; depends=[curl digest jsonlite openssl packrat rstudioapi yaml]; }; rscontract = derive2 { name="rscontract"; version="0.1.2"; sha256="0gn0xcvg9nj6m97g4si6bgmgaj6hxpicz8yig7n84jnczh6w510x"; depends=[]; }; rscopus = derive2 { name="rscopus"; version="0.6.6"; sha256="0kl6rv0j2396b8izvy0lp1f588il6w3yhq6d4swv8x8z14rsgcpw"; depends=[dplyr glue httr jsonlite plyr tidyr]; }; - rscorecard = derive2 { name="rscorecard"; version="0.18.0"; sha256="1y53cg296lna3fmqm31mbvfcwylxkwb981799irzg2l9gfqv1rrg"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; + rscorecard = derive2 { name="rscorecard"; version="0.20.0"; sha256="0psh53r8hvyvg7n20p7dl2qnd5gznx1lfkxqrc05kfksl4zvrrm5"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; rsdmx = derive2 { name="rsdmx"; version="0.6"; sha256="1sw8pp2j22rs1nlsyphyqbhywgplan9qmrs5wm9wvrn5g26k4bg9"; depends=[httr plyr R6 XML]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.5.0"; sha256="1xlk83ivmk8wm6mdmmwvv2z39r6scswgmsmy6dd4qbc3kiqn8cqm"; depends=[lavaan MASS]; }; - rsetse = derive2 { name="rsetse"; version="0.4.0"; sha256="1mas970p93r0jhxnm1q0sb080k2hh5sxq5q5vrwbj5csxg3c029a"; depends=[dplyr igraph magrittr Matrix minpack_lm purrr rlang tibble]; }; + rsetse = derive2 { name="rsetse"; version="0.5.0"; sha256="095f37a48l9dhz5s3zri6y1kv74x150wrrxinrh177mi3m63shgr"; depends=[dplyr igraph magrittr Matrix minpack_lm purrr rlang tibble]; }; rsf = derive2 { name="rsf"; version="0.2.2"; sha256="016q6yly2vl6q9mkff2krri2rmzsm9gc9gippd8l38h5c8ri6cdl"; depends=[bookdown knitr magrittr rlang usethis yaml ymlthis]; }; - rsimsum = derive2 { name="rsimsum"; version="0.9.1"; sha256="147qn67kwkzgrvg74rdjmck95p2pnq8xxd91f3m801r0gxlz2zr7"; depends=[checkmate ggplot2 ggridges knitr rlang scales]; }; + rsimsum = derive2 { name="rsimsum"; version="0.10.1"; sha256="1k5b327c3g70q9bn4fcsdw120jh99sdzb9bir23g00in0haihdsp"; depends=[checkmate generics ggplot2 ggridges knitr lifecycle rlang scales]; }; rsinaica = derive2 { name="rsinaica"; version="0.6.1"; sha256="1ba19b2fgnnl50qp6hgjppgxbadghq68qap9f0m51k2k3ijgfiwn"; depends=[dplyr httr jsonlite lubridate stringr]; }; rskey = derive2 { name="rskey"; version="0.4.4"; sha256="1la3apypp1kk425r753vqwm3nk9zmynp9gix6db0ckkssw0fjxpw"; depends=[berryFunctions rstudioapi]; }; rsleep = derive2 { name="rsleep"; version="1.0.3"; sha256="11r32xxqdi0cvx67x8yrb4c36c73mgdy18sayg18cnsqb9qhxvyz"; depends=[edfReader ggplot2 jsonlite phonTools psd signal]; }; @@ -14781,21 +15393,23 @@ in with self; { rsparse = derive2 { name="rsparse"; version="0.4.0"; sha256="1blg59gsidh0sn6yy761pisz2phml0hzgqc24s5s8q9q903rddr9"; depends=[data_table float lgr Matrix Rcpp RcppArmadillo RhpcBLASctl]; }; rspiro = derive2 { name="rspiro"; version="0.2"; sha256="1gjil39ib9p86a7r3i03h01x2dsc9y283rnp65xvavrzmmgz87b4"; depends=[]; }; rsppfp = derive2 { name="rsppfp"; version="1.0.4"; sha256="123yv54i58xj4wx9n08qp50mm4l271fm1zhzimrxx22wn2bg8zy5"; depends=[doParallel dplyr foreach igraph stringr tidyr]; }; + rsprite2 = derive2 { name="rsprite2"; version="0.1.0"; sha256="0pflmdm83gskfbxha7r28w1w7xs2k8shp6w3py5mjjpklm2rn8ny"; depends=[checkmate Rdpack]; }; rsq = derive2 { name="rsq"; version="2.2"; sha256="1hjzk5mvva4b0r2r8bisg915iz32aiynp8w57d2xikdfb90nw5h0"; depends=[Deriv lme4 MASS Matrix nlme]; }; - rstac = derive2 { name="rstac"; version="0.9.1"; sha256="0k6w5h0qgw0z02sap6jnirjpzgi0vk6gr84jwpikw1vc6g7jmpsg"; depends=[crayon httr jsonlite magrittr]; }; + rsqliteadmin = derive2 { name="rsqliteadmin"; version="1.0.1"; sha256="1d9szm3nsr1q3hqrmapxdlymmgb3655n8v6x2vpcpahg54ajqrp5"; depends=[config data_table disk_frame DT fs golem magrittr RSQLite shiny shinyAce shinydashboard shinyFiles shinyjqui]; }; + rstac = derive2 { name="rstac"; version="0.9.1-4"; sha256="162y6lbn62r1lmn7x20klw293vj63bq8q1zm3zlyvgaq2im9y8h3"; depends=[crayon httr jsonlite magrittr]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; rstan = derive2 { name="rstan"; version="2.21.2"; sha256="0jh58qfrksd2j9w2zy4bajryivgp36m3xdb9mjrjqbk1ib9h83p3"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen RcppParallel StanHeaders V8 withr]; }; rstanarm = derive2 { name="rstanarm"; version="2.21.1"; sha256="04ggzak3f7jaxza3dxyrmxp5b48qcgyspy22ykbhr03g4hzp7jk8"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen RcppParallel rstan rstantools shinystan StanHeaders survival]; }; rstanemax = derive2 { name="rstanemax"; version="0.1.3"; sha256="0myxcqwpk4zq5y1ri14rbsbb19kr8g7fd3mfdsn8vh2yi5xlcqk1"; depends=[BH dplyr ggplot2 magrittr purrr Rcpp RcppEigen rstan rstantools StanHeaders tidyr]; }; rstantools = derive2 { name="rstantools"; version="2.1.1"; sha256="0b9x8rzj3dr4m7yjx476nn42z22xd1xnw85m9frfwxy5ivg1any9"; depends=[desc Rcpp RcppParallel]; }; - rstap = derive2 { name="rstap"; version="1.0.3"; sha256="176z39k54l5r60md6wziz828c46alv2pmqivvmhvb358crrb8x7n"; depends=[abind bayesplot BH dplyr ggplot2 lme4 loo Matrix nlme pracma Rcpp RcppEigen rstan rstantools StanHeaders]; }; rstatix = derive2 { name="rstatix"; version="0.7.0"; sha256="0330y8iziffqg8j9j5h9zv4qcdyf8ybhmzxrr9fzq9nc6bf1gbm5"; depends=[broom car corrplot dplyr generics magrittr purrr rlang tibble tidyr tidyselect]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.3"; sha256="07w7ixq1faq7mif2ksxcgl8n6ali9h0wx0nb2yz4kbdgvz68r7b9"; depends=[httr jsonlite]; }; - rstiefel = derive2 { name="rstiefel"; version="1.0.0"; sha256="0g09fpp3432v78gqgn0hiva6zqr8yqn379wz4428wanmiskqr3f0"; depends=[]; }; + rstiefel = derive2 { name="rstiefel"; version="1.0.1"; sha256="063nj6k2qzc5wd1dk6m6ld16sk2vlfa8ic86gc4qkqsla8l82fgg"; depends=[]; }; rstoat = derive2 { name="rstoat"; version="1.0.0"; sha256="0chlkvdxkwa8fr1kh3rasph5x837v39jwjvwwcwf6fvqmfbgmfpn"; depends=[curl httr jsonlite keyring]; }; rstpm2 = derive2 { name="rstpm2"; version="1.5.2"; sha256="0c6l3z250b2kn6mh2xyb0bd2y5nsbj11n9xfi51dac9s8xq3v7m4"; depends=[bbmle BH deSolve fastGHQuad mgcv Rcpp RcppArmadillo survival]; }; rstream = derive2 { name="rstream"; version="1.3.6"; sha256="1mr869hff5wdpw6a7x71366y8dxf9vljbb11fssfkhcf7hm2ipnj"; depends=[]; }; + rstudio_prefs = derive2 { name="rstudio.prefs"; version="0.1.7"; sha256="1b93hakw5wn8fp99zp22rm8yd27m1884ig1xx5bbcifgxanvic57"; depends=[cli dplyr fs jsonlite purrr rappdirs rlang rstudioapi rvest tibble]; }; rstudioapi = derive2 { name="rstudioapi"; version="0.13"; sha256="12vdfzzjc6mv4h105l8cp108j3hjk0mqmg23m6mqr3jarfymphxa"; depends=[]; }; rsubgroup = derive2 { name="rsubgroup"; version="1.1"; sha256="16glxyv6aja7j0vfjccfi8w84wzm2ajfl62l0g5vpl73j7cs6gnk"; depends=[foreign rJava]; }; rsurface = derive2 { name="rsurface"; version="1.1.0"; sha256="1pymbgvr72nqd66wap5wrcizzx2k9bfr6vkxv6dkvjmi8q7jl2gv"; depends=[plotly rsm]; }; @@ -14803,12 +15417,12 @@ in with self; { rsvd = derive2 { name="rsvd"; version="1.0.5"; sha256="07p2hjmpcwcsang8z9sjkpy94rydcin7m3hyvcgzgm5cd6w8c1p4"; depends=[Matrix]; }; rsvg = derive2 { name="rsvg"; version="2.1.2"; sha256="10p6aps2rsvhf4xgngl9x20cf2wqbzhlpjds8biyihvj58c1q8nn"; depends=[]; }; rsyncrosim = derive2 { name="rsyncrosim"; version="1.2.9"; sha256="0hjlgqd4fzsbhh1vrg35kd536d721svg6856npb26zsyvza6nyaj"; depends=[DBI raster RSQLite]; }; - rsyntax = derive2 { name="rsyntax"; version="0.1.1"; sha256="1z0wy1rfqdb9nfmrprqjsdjx1isn484r8ahp7x24ncql9snngia8"; depends=[base64enc data_table digest igraph magrittr png rlang stringi tidyselect tokenbrowser]; }; - rsyslog = derive2 { name="rsyslog"; version="1.0.1"; sha256="1i33bpv894jk7cixsvn85h1g532zj39f8dfqq8cyzgsav9wba2y4"; depends=[]; }; - rt = derive2 { name="rt"; version="1.0.1"; sha256="1l04rx5cvg3sxff4i22bnckljq0rr6jld7dd3kpirdj8psak70id"; depends=[httr stringr]; }; + rsyntax = derive2 { name="rsyntax"; version="0.1.2"; sha256="1a0249bzl47vwqivi7rdwfq7b2wx7pxpyps49q0ldn6a0askhhij"; depends=[base64enc data_table digest igraph magrittr png rlang stringi tidyselect tokenbrowser]; }; + rsyslog = derive2 { name="rsyslog"; version="1.0.2"; sha256="0sc9jiscabr72fsx1wwjvq44casvhdsinj77wrcp017a4f9i0k5b"; depends=[]; }; + rt = derive2 { name="rt"; version="1.1.0"; sha256="1wwx3pjwsqvar25cddc4090vcngir81a7n9yiv4q8i47h58xmc2g"; depends=[httr stringr]; }; rt_test = derive2 { name="rt.test"; version="1.18.7.9"; sha256="0ywkdjvfzmrmmsfkz4jbhwzbzv7wivx80xy8wr92dch1862h6ias"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; - rtables = derive2 { name="rtables"; version="0.3.6"; sha256="0yc9jv3xfan4ai8xf2vv7bmy7wg1q2jl4l0iazv8byxlklfafwhl"; depends=[htmltools magrittr]; }; + rtables = derive2 { name="rtables"; version="0.3.8"; sha256="0vp46mqgnl7r4y5gf4g8ixlh4m1r8zcz9sijmwj8f6vlsbc7ldiy"; depends=[htmltools magrittr]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; rtdists = derive2 { name="rtdists"; version="0.11-2"; sha256="0fap15bkxn2azd5a4j3q9mxpif5ff3y2vb8rm4xnh8l0sl1lw7cs"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; @@ -14816,24 +15430,23 @@ in with self; { rtern = derive2 { name="rtern"; version="0.1.1"; sha256="00yhsns89jynh2gpgwwklkf0pbwcriha76ff3sh7pb5n6hl5nr1c"; depends=[lifecycle]; }; rtext = derive2 { name="rtext"; version="0.1.22"; sha256="0wsy0iqzbfin92pw0bqj4bxm2p4f2y4frr137l6c3yvd0jrax3q4"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-14.1"; sha256="032ff0yavqmd2d9svgwkmvxwh0cxjbac6pj48v4cshi898f02rhh"; depends=[R_methodsS3 R_oo]; }; - rticles = derive2 { name="rticles"; version="0.19"; sha256="1zcj5y54z1max1df9j2iclm6zlcic4wj684y18wcnmmdwfs51818"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rticles = derive2 { name="rticles"; version="0.21"; sha256="0xk0xz97k8r8srmniihn3y4dkxddxf97yjbsljcxlgcq8f0zcc2s"; depends=[knitr rmarkdown tinytex xfun yaml]; }; rticulate = derive2 { name="rticulate"; version="1.7.2"; sha256="0xgl36m63z9kzqj0srjp3lb65hfizszlgw0kwjwc9li607q4fy6m"; depends=[dplyr ggplot2 glue magrittr mgcv purrr readr rlang stringr tibble tidymv tidyr tidyselect tidyverse]; }; - rtide = derive2 { name="rtide"; version="0.0.8"; sha256="0q3fcxxlipj12128p25h5hg92snimlpan86q9bncp20sz1skrwzx"; depends=[abind chk dttr2 tibble]; }; + rtide = derive2 { name="rtide"; version="0.0.9"; sha256="0gr0j52jy7y1w1s0s88rjv9l85yvavypagmi0qw2ix9ca2xadlzl"; depends=[abind chk dttr2 tibble]; }; rties = derive2 { name="rties"; version="5.0.0"; sha256="1mxgzrlf41hhawab2664az151fmmhm8ivnnimmzm538yliilc0b7"; depends=[DataCombine DescTools deSolve dplyr ggplot2 gridExtra interactions lattice lme4 MASS mclust nlme nnet plyr zoo]; }; - rtika = derive2 { name="rtika"; version="1.24.1"; sha256="12r9br3pn3llaixa5dn6g5468nsy5adajgdnnvfyhhbkrr0jwpi5"; depends=[curl digest rappdirs sys]; }; - rtimicropem = derive2 { name="rtimicropem"; version="1.4.0"; sha256="0z6bnzks8mcb871m3z5b3cd883hj1i17swjgly005hvwbvi9h61f"; depends=[changepoint dplyr fs ggplot2 knitr lazyeval lubridate R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; rtist = derive2 { name="rtist"; version="1.0.0"; sha256="0p4jlz0z0nbvmixdrym6nqagz2i28zbsijcj785rd6wiy72d2hg5"; depends=[]; }; rtk = derive2 { name="rtk"; version="0.2.6.1"; sha256="1xafmp5y5p8fnsh16wj8n08x69v2hawnsvsy7g4dcz1i5xkhyc0m"; depends=[Rcpp]; }; rtkore = derive2 { name="rtkore"; version="1.5.5"; sha256="0srk0ih4gbmhb1pl6zf8sjwrkdmgws9cl1397fcqv6l3bc376622"; depends=[inline Rcpp]; }; - rtmpt = derive2 { name="rtmpt"; version="0.1-19"; sha256="1cpakgy0rmy27b14krmgdrf1fi0mar4k5rklnvmphivid8150gzn"; depends=[coda data_table loo matrixcalc stringr truncnorm]; }; + rtmpt = derive2 { name="rtmpt"; version="0.2-1"; sha256="0rq8ialqh748bj6lgds5ip7w2yicxc6cp16f2zbfc6mv7j5dv1h2"; depends=[coda data_table loo stringr truncnorm]; }; rtodoist = derive2 { name="rtodoist"; version="0.1.0"; sha256="12lh14ps4snlyykhc65nvn8ipic8is8ssmgcx73snmifhrzxgdyb"; depends=[digest dplyr getPass glue httr keyring magrittr purrr]; }; rtop = derive2 { name="rtop"; version="0.5-14"; sha256="1wwllckginnzisapbklpsizy47db24r83xahq4qsd8zhqvv9yj33"; depends=[gstat sp]; }; - rtrek = derive2 { name="rtrek"; version="0.3.2"; sha256="0yvl1l9ynvpd2p2qksb65fz4cvx36lwdvvh8gp0j280qs78cclq8"; depends=[downloader dplyr ggplot2 jpeg jsonlite magrittr memoise purrr rvest tibble tidyr xml2]; }; + rtrek = derive2 { name="rtrek"; version="0.3.3"; sha256="1lnjwslx1l0vgysw3m1s83h246grplmv4mdk4m6ym83mrdmkzvhi"; depends=[downloader dplyr ggplot2 jpeg jsonlite magrittr memoise purrr rvest tibble tidyr xml2]; }; + rtrend = derive2 { name="rtrend"; version="0.1.2"; sha256="01d2538qjgs9nng7gmb8y9a0wsxg6gm3p9z1m15sap1g5wl3z6fs"; depends=[boot fftwtools ggplot2 magrittr matrixStats Rcpp RcppArmadillo]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; rtrim = derive2 { name="rtrim"; version="2.1.1"; sha256="1l2ijkm4p3nd7n4q1b4y9pdyafgyf76zizpi7hhzw1rr9zkxhff2"; depends=[]; }; rts = derive2 { name="rts"; version="1.0-49"; sha256="086zlmcjsv7a38k1jfzq2vhlmx7nivhffcz83i57hl6wbkjl7gv2"; depends=[raster RCurl sp xts zoo]; }; - rtsVis = derive2 { name="rtsVis"; version="0.0.2"; sha256="119gjpdjbm4wcb7c10q12s17w3k0andkkbgzx7akbc9dvvz9rg8c"; depends=[assertthat dplyr ggplot2 moveVis pbapply raster RStoolbox sf sp tidyr]; }; + rtsVis = derive2 { name="rtsVis"; version="0.0.3"; sha256="0j48p4cdkd3dwc5bxv8kmmqj38yaq4rz0wp47kx21msbajcw5m3m"; depends=[assertthat dplyr forcats ggplot2 magrittr moveVis pbapply raster RStoolbox sf sp tidyr]; }; rtsdata = derive2 { name="rtsdata"; version="0.1.2"; sha256="0h0zk8vy21xh0n6pcipgml0b0f4pfi94q6hjdqkxd3xsa6a5scra"; depends=[alfred anytime brotli curl data_table mongolite Quandl quantmod xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; rtsplot = derive2 { name="rtsplot"; version="0.1.3"; sha256="0va6ir0bmpnw4ibvfh2j4z01flg72dpxn7q10sdsdj304hb0g4in"; depends=[quantmod RColorBrewer xts zoo]; }; @@ -14847,7 +15460,7 @@ in with self; { ruimtehol = derive2 { name="ruimtehol"; version="0.3"; sha256="1qscaj28xrrqccav0y82mn5nzkc8zfgmx2axg7bxrrhqaibfpy5j"; depends=[BH Rcpp]; }; ruin = derive2 { name="ruin"; version="0.1.1"; sha256="124xs1c2mjfy6z0bp83rwkqw2y73g77xwn3q4yd2xw0v2frnpvpz"; depends=[ggplot2]; }; ruler = derive2 { name="ruler"; version="0.2.4"; sha256="159k7453jb37zgjg9rcgz566mz2827dpfq5gm40r6zgkia4z3apx"; depends=[dplyr keyholder magrittr rlang tibble tidyr]; }; - rules = derive2 { name="rules"; version="0.1.1"; sha256="1ksbw8v5ij0mya5jq62hyy6ak6x9lx82vq8cmck0hfixapgf8s1x"; depends=[dials dplyr generics parsnip purrr rlang stringr tibble tidyr]; }; + rules = derive2 { name="rules"; version="0.1.2"; sha256="1mmwlrybkv2xq49rwfv2d60wzl6hiq9jdyy9blw24vlvbyp0c42p"; depends=[dials dplyr generics modeldata parsnip purrr rlang stringr tibble tidyr]; }; rumidas = derive2 { name="rumidas"; version="0.1.1"; sha256="1hnkjj689kn7sx5gvjrh1x3n5pickb9d0adb5n0grjq4j5ympbns"; depends=[highfrequency lubridate maxLik Rdpack roll tseries xts zoo]; }; runes = derive2 { name="runes"; version="0.1.0"; sha256="1s2vhwya434q70j4aq4qbds8wivscc5cyldr5pch7p41nqj0j7aw"; depends=[]; }; runexp = derive2 { name="runexp"; version="0.2.1"; sha256="0pcxwz0kpfrcsfalwlcwp81k3dyc9rqm9rba25xkp51bwz5scv64"; depends=[doParallel foreach]; }; @@ -14857,7 +15470,7 @@ in with self; { runstats = derive2 { name="runstats"; version="1.1.0"; sha256="0n9348af60j8a2mwgbafabspb4nm45ry92zlzmynja06zyx8lb2d"; depends=[fftwtools]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1.1"; sha256="0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; - rust = derive2 { name="rust"; version="1.3.11"; sha256="10ih36dlk5i8r0i8ld4kh2pm3p1dvdqnw3hqv9njjbbj1zkw5fyy"; depends=[Rcpp RcppArmadillo]; }; + rust = derive2 { name="rust"; version="1.3.12"; sha256="06brscgys7256irp2dp731dafjv7m1f5i9w03fix9m1x9d4rc9cf"; depends=[Rcpp RcppArmadillo]; }; ruta = derive2 { name="ruta"; version="1.1.0"; sha256="1qr2ryz55h2j3wlwg0535lhmk2ydm0idfxl07rlfxq1pi32cjms1"; depends=[keras purrr R_utils]; }; rutifier = derive2 { name="rutifier"; version="1.0.4"; sha256="045pr8apd105azs1glpwqrbamglqddxfpml9yrfrlaivz3fjd9l8"; depends=[R_utils]; }; ruv = derive2 { name="ruv"; version="0.9.7.1"; sha256="1n4q9mrp9f644spbns6bbnzmlabrg90hwkdfg3hnm3rxp9b4xid0"; depends=[ggplot2 gridExtra scales]; }; @@ -14865,17 +15478,17 @@ in with self; { rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvalues = derive2 { name="rvalues"; version="0.7.1"; sha256="0vgizlm5g6mnzvwsprgg0wj0k2y3nc8zn1bqdaw58py92mqpvj1d"; depends=[]; }; - rvcheck = derive2 { name="rvcheck"; version="0.1.8"; sha256="0627bc8qmhxmd63yh6f90qni3qw1zwdpxjln2qbychzmzd4am9ac"; depends=[BiocManager rlang]; }; - rversions = derive2 { name="rversions"; version="2.0.2"; sha256="0ghpla5r3d6zh5dn6d6ii5p0a952lcdv004m88fk8r9k76vz88rm"; depends=[curl xml2]; }; - rvertnet = derive2 { name="rvertnet"; version="0.8.0"; sha256="1j8kgyzcn14yl44lnxc8f83wpmgpdzx5aiw91zjbjkajj6bgzrpn"; depends=[crul dplyr ggplot2 jsonlite maps]; }; - rvest = derive2 { name="rvest"; version="1.0.0"; sha256="04spcv6nxlmx5bxncq0vybfqrs8jgjamzyrn6wmkdcwii8jvyn53"; depends=[httr lifecycle magrittr rlang selectr tibble xml2]; }; + rvcheck = derive2 { name="rvcheck"; version="0.2.0"; sha256="09gx29q882vh4q1qbb8z8lc3pgmpn7bk8skzcm85mrf3x3vgvkpa"; depends=[BiocManager yulab_utils]; }; + rversions = derive2 { name="rversions"; version="2.1.1"; sha256="1cbwwbz8lqx2n33xr4q904whvld22s63rpyy1nn93395l7ssrakr"; depends=[curl xml2]; }; + rvertnet = derive2 { name="rvertnet"; version="0.8.2"; sha256="09lja7dd1rdln7cpd4rn4l3fynm223as3k295dcwf4x26gna7s9d"; depends=[crul dplyr ggplot2 jsonlite maps tibble]; }; + rvest = derive2 { name="rvest"; version="1.0.1"; sha256="1v99bpp2077s4y5phvkzpgjyr8cs9axifm1c3npw6jmh8x9j91h8"; depends=[httr lifecycle magrittr rlang selectr tibble xml2]; }; rvg = derive2 { name="rvg"; version="0.2.5"; sha256="1i0alsr9ahl54gwszvaqz5qgiqs85wwzs5d31z97x315sk3n994j"; depends=[gdtools officer Rcpp rlang xml2]; }; - rviewgraph = derive2 { name="rviewgraph"; version="1.4.0"; sha256="1430c5nzsrmyq6sxp8qbjw8g462gx4vjp8xx7y5aqbgr47xmhpg3"; depends=[rJava]; }; + rviewgraph = derive2 { name="rviewgraph"; version="1.4.1"; sha256="0j6g9qwxf4bzv9lr7fkgmk60cqid8kmck1x9kjf8il89qahbvsfs"; depends=[rJava]; }; rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.5.1.1"; sha256="1l791d2hp7xg7wv0wpm14g2ilmq0ima7p0l6xhw6s5q2wz34lkcm"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; - rvkstat = derive2 { name="rvkstat"; version="3.0.1"; sha256="17qlays4kycsp1cjrk5rpsciw50ll9a91kd3q15b2s39di3l04nf"; depends=[dplyr httr jsonlite lgr stringr tidyr]; }; + rvkstat = derive2 { name="rvkstat"; version="3.1.0"; sha256="1j4139lbdnig8vhmg3bs591xzb7b09kcg2aj8g4y1gp71mdwr07h"; depends=[dplyr httr jsonlite lgr stringr tidyr]; }; rvmethod = derive2 { name="rvmethod"; version="0.1.2"; sha256="1g2d5pvz5s1sj2kalxaz7nb8874m4113ly809zbimngi1lhg8zi1"; depends=[assertthat locfit]; }; rwa = derive2 { name="rwa"; version="0.0.3"; sha256="11irb6ayr1a1rbmhc9zqwyb1vjfc0fq7imji0lfa30zplwgf1mqh"; depends=[dplyr ggplot2 magrittr tidyr]; }; - rwalkr = derive2 { name="rwalkr"; version="0.5.5"; sha256="0bpjrk3kcl4g11kyrpbbvi7xhbwlr4x5n5y3330q923m3sgcdg8l"; depends=[dplyr hms httr progress tidyr]; }; + rwalkr = derive2 { name="rwalkr"; version="0.5.6"; sha256="11jd3gq0cm2kk8qlk372sj1a30qf4mic25q6jzjn9r68a5syxvpx"; depends=[dplyr hms httr progress tidyr]; }; rwavelet = derive2 { name="rwavelet"; version="0.4.1"; sha256="092c1h1xyyi2fwg99dgbn1b22cgf8mliizjpc2z7dnravznprr94"; depends=[signal]; }; rwc = derive2 { name="rwc"; version="1.11"; sha256="1qhgkbkp4nz0wq5c4x8232xiszpiyzcdklfgvpnx4cbp3bbfdi4g"; depends=[MASS Matrix mvtnorm raster]; }; rwebstat = derive2 { name="rwebstat"; version="1.1.0"; sha256="106dkhlr33ii17q45c1hrmbslwsj1qlmx325skch2q71mv7ii0lj"; depends=[dplyr getPass htmltools httr jsonlite readr stringr]; }; @@ -14890,29 +15503,31 @@ in with self; { rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; }; rxylib = derive2 { name="rxylib"; version="0.2.6"; sha256="0z0mfk5g7jdrw28f6jzifis2jsw35w7g1p0bv3b6a4rfmbnjhmwk"; depends=[BH Rcpp]; }; ryandexdirect = derive2 { name="ryandexdirect"; version="3.6.0"; sha256="0f1z8gp1pxfqx694alj435ihzxvd9ban04b1clzipgdq9la1hza8"; depends=[bitops data_table dplyr httr jsonlite magrittr purrr readr stringr tidyr xml2]; }; - rym = derive2 { name="rym"; version="1.0.3"; sha256="0sxi9a4rx78kxcfvsmyzr138fhzb19pwvj29ryijlsfl7n2h4h16"; depends=[httr purrr stringr]; }; + rym = derive2 { name="rym"; version="1.0.5"; sha256="0brh8hm3x21swypnzj3bbbf7njgarsj4804fp5lcqlr4nadzx26y"; depends=[httr purrr stringr]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rzentra = derive2 { name="rzentra"; version="0.1.0"; sha256="1knp1616ck64wgf3r80s1nywdnljc1r9fjvgg531j0fxir04aqkl"; depends=[data_table dplyr httr jsonlite lubridate magrittr purrr]; }; rzmq = derive2 { name="rzmq"; version="0.9.8"; sha256="0lqwxi9ckydvrmmkwy3mhqd28gyajijznbbb4j23mnmi0aspwnl1"; depends=[]; }; - s2 = derive2 { name="s2"; version="1.0.4"; sha256="0plq5gr9mk7dv6nzddgkgz8wx2iqdxn0dcxgjhzlg99swfx4w9rw"; depends=[Rcpp wk]; }; - s20x = derive2 { name="s20x"; version="3.1-30"; sha256="03j4hkrfxx23f4v3428wrpm5f09a6vcbpb2b12q68qshkqdjrpmg"; depends=[]; }; - s2dv = derive2 { name="s2dv"; version="0.1.1"; sha256="18vb90a9kmdk861r3w99gx4ijmpws2f5xbxdbyll5gjj9nr3vx6k"; depends=[abind bigmemory ClimProjDiags GEOmap geomapdata mapproj maps multiApply ncdf4 plyr]; }; - s2dverification = derive2 { name="s2dverification"; version="2.9.0"; sha256="0kynj8l39dswm2v6051ikgp0a0pi0c3gsdmhrxwjrxrpbgm7hrhn"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; + s2 = derive2 { name="s2"; version="1.0.6"; sha256="1xd42bpbm090dqlldavbn6c1h1mfwhlws9536avan00w3szlxk56"; depends=[Rcpp wk]; }; + s20x = derive2 { name="s20x"; version="3.1-31"; sha256="0gnp703blgawfymd6nxz98w8g7sabagrnk3qc3d3cxj887w83gih"; depends=[]; }; + s2dv = derive2 { name="s2dv"; version="1.0.0"; sha256="15nx9g29l08d0nq0l5fjvwhwxin2jnpkiv4jp7gxkaw2diykbzkk"; depends=[abind bigmemory ClimProjDiags easyNCDF GEOmap geomapdata mapproj maps multiApply NbClust ncdf4 plyr SpecsVerification]; }; + s2dverification = derive2 { name="s2dverification"; version="2.10.0"; sha256="0sf47jxhw463qfaajiqla21nz7343fw3fzkyzyq2j8zdp7lj7xr2"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; s2net = derive2 { name="s2net"; version="1.0.1"; sha256="1f6lc8azx8lax7jc5ggzirwnp5d9ka2plimfkg70vx783xf56zaw"; depends=[MASS Rcpp RcppArmadillo]; }; s4vd = derive2 { name="s4vd"; version="1.1-1"; sha256="1rp3z42nxmrvb942h3c5cl544lngzx7nrnnr4zjw7dq495bym7yp"; depends=[biclust foreach irlba]; }; sAIC = derive2 { name="sAIC"; version="1.0"; sha256="1ih63cfs98kb61gwbmrx2yq7iacb5qa1qrh1a264041qd27r5pj5"; depends=[]; }; sBF = derive2 { name="sBF"; version="1.1.1"; sha256="0dankakl4rwl9apl46hk57ps4mvn2l1crw4gdqds26fc8w6f6rab"; depends=[]; }; sBIC = derive2 { name="sBIC"; version="0.2.0"; sha256="1fx17c9w7v6wi02i293vjdahwxx4b5a118r655cl12gsd5qwqj11"; depends=[combinat flexmix hash igraph mclust poLCA R_methodsS3 R_oo Rcpp]; }; + sClust = derive2 { name="sClust"; version="1.0"; sha256="0bvvbb360454d39bkynpbaf6ll9xsc3gxgxivy0igbr2pipfwbap"; depends=[class cluster]; }; + sEparaTe = derive2 { name="sEparaTe"; version="0.3.0"; sha256="0wfwipvv1mirsmnwwa521rd1xrrj7pidw2gjan7xwa52sgfsbdg9"; depends=[]; }; sFFLHD = derive2 { name="sFFLHD"; version="0.1.2"; sha256="014gy3nj6gr740z4apw82jh4n7s57zmnr95bm3g9xxnwnb224npq"; depends=[conf_design DoE_base R6]; }; + sGBJ = derive2 { name="sGBJ"; version="0.1.0"; sha256="145mxfpl8gpycz8fl1ddlxy61rwpcqlfdrva6yhwzv4awwsv1fvn"; depends=[GBJ survival]; }; sGMRFmix = derive2 { name="sGMRFmix"; version="0.3.0"; sha256="183i3159k2cxpanm09zcy2y1vvjd6185gjjf81c3284prw3aky2c"; depends=[ggplot2 glasso mvtnorm tidyr zoo]; }; sNPLS = derive2 { name="sNPLS"; version="1.0.27"; sha256="0h05crdmwmzax4pwmyxb2z1dagyqb3kybpxc064y1kl8m84kcyvv"; depends=[clickR future future_apply ggplot2 ggrepel ks MASS Matrix pbapply]; }; sRDA = derive2 { name="sRDA"; version="1.0.0"; sha256="0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk"; depends=[doParallel elasticnet foreach Matrix mvtnorm]; }; - sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; }; sSDR = derive2 { name="sSDR"; version="1.2.0"; sha256="1fqsglqzsbzdvcdnwwf7mg6x20zfpw66x63r6avac3w1pz3n7kvx"; depends=[MASS Matrix]; }; sValues = derive2 { name="sValues"; version="0.1.6"; sha256="0830f4w6jgpiysk0vz0bxaxwa8m3k94fgj9l3qb42r3jjf9cdn29"; depends=[ggplot2 reshape2]; }; saasCNV = derive2 { name="saasCNV"; version="0.3.4"; sha256="12h5vrl55sb4wmx0hzib5iax8p0q2qzk19h15r0asfkh9l7qz94l"; depends=[DNAcopy RANN]; }; sabarsi = derive2 { name="sabarsi"; version="0.1.0"; sha256="14c94zby3jjm6jr28nrg3qp6r6iw68wsb5l5bpd6jjz9pkljrk9i"; depends=[]; }; - sabre = derive2 { name="sabre"; version="0.3.2"; sha256="14rvc8in8lfs9vg96jkqm3xg7bszwss5zd78vngp36x4yay007b6"; depends=[dplyr entropy raster rlang sf tibble tidyr]; }; + sabre = derive2 { name="sabre"; version="0.4.0"; sha256="02gbyc458i0x15n2ra7853h373yrf1c570sp2w0zidwlxg94ars0"; depends=[dplyr entropy raster rlang sf tibble tidyr]; }; sac = derive2 { name="sac"; version="1.0.2"; sha256="1yg133zm0db2lv0m62ij7c27bs4k3kbjic15dwrak534lk885sj2"; depends=[]; }; saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sad = derive2 { name="sad"; version="0.1.3"; sha256="0wr4xdx68hrxaw5izy36gm10smk6s1gzrzwayhfp4lhvkn75qsww"; depends=[dualtrees emdist]; }; @@ -14923,21 +15538,25 @@ in with self; { saeRobust = derive2 { name="saeRobust"; version="0.2.0"; sha256="1bdfrsm59xwkga0kxl3r5n83mhhkyzj7gplrgx26gyflashyd1zc"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules pbapply Rcpp RcppArmadillo spdep]; }; saeSim = derive2 { name="saeSim"; version="0.10.0"; sha256="0nh8x2v0g8i0rjq4s5q0ayhyxhl5p0126plmd4vnnhaifm6pn0q3"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; saeeb = derive2 { name="saeeb"; version="0.1.0"; sha256="04vjxmnqcgqcamgjd9qq1dbx0msm40mnn94jjy9pzvsj2gsbws39"; depends=[COUNT MASS]; }; + saekernel = derive2 { name="saekernel"; version="0.1.1"; sha256="0zk124kkxrwr3bliy01d3ag4r0flnjg4z3lmm5wmq3w0r4gwgy4f"; depends=[]; }; saemix = derive2 { name="saemix"; version="2.4"; sha256="0w79n28xvkf2iw0vm9bw5dhxlp54bzm1lwl7q2hw356c2gmbpwjh"; depends=[]; }; saery = derive2 { name="saery"; version="1.0"; sha256="09x1v627llqbpiwkh1wr0z7gsndfdrjzag2hprhq1adbzh05k47z"; depends=[]; }; safeBinaryRegression = derive2 { name="safeBinaryRegression"; version="0.1-3"; sha256="1g68r6pp5l41rbgyfqgcha1gpsisnl0ybdmdqr4ylr43f61dpgvd"; depends=[lpSolveAPI]; }; safedata = derive2 { name="safedata"; version="1.0.9"; sha256="0xcpgh4898rqdnnxx21vyxc8aqlwg26aywr591sllasrv1jzsmrc"; depends=[chron curl igraph jsonlite readxl sf]; }; safejoin = derive2 { name="safejoin"; version="0.1.0"; sha256="0qvra505g7cay3nhq6yqrddb7sw3kx50y8jhgvxi47rxdc3alzba"; depends=[dplyr glue]; }; safer = derive2 { name="safer"; version="0.2.1"; sha256="1lmhaj9y0hi4ybxfkllxl99vsagcg73sy4kkcmlvn3bs69jky1r9"; depends=[assertthat base64enc sodium]; }; + safetyCharts = derive2 { name="safetyCharts"; version="0.2.0"; sha256="1gdrl7wmxlvnk8wghrjv3cnvdsmx79f1s0j51yb4q94dxprssajh"; depends=[dplyr DT forcats ggplot2 huxtable kableExtra knitr pharmaRTF RColorBrewer rlang shiny stringr Tendril Tplyr]; }; safetyData = derive2 { name="safetyData"; version="1.0.0"; sha256="1spa1wh1z8cqsz8vrkj3abny0xs3qp8d80dla8d031d70hvfkdjc"; depends=[]; }; - safetyGraphics = derive2 { name="safetyGraphics"; version="1.1.0"; sha256="1s8xwx014nihn13v6rpwy11sb3yzfyj3alb88y47wp1kh39d7f0q"; depends=[dplyr DT haven htmlwidgets jsonlite magrittr purrr rlang rmarkdown shiny shinybusy shinyjs shinyWidgets stringr tibble tidyr]; }; + safetyGraphics = derive2 { name="safetyGraphics"; version="2.0.0"; sha256="1y1qj8vhq3z3g4ij2qkc5cpwc5zknmjnp3kpkbcr9cywjrdpa5pq"; depends=[datamods dplyr DT htmlwidgets jsonlite magrittr purrr rclipboard rlang safetyCharts safetyData shiny shinyjs sortable stringr yaml]; }; + sageR = derive2 { name="sageR"; version="0.3.0"; sha256="093qxwbkf8cqc3zjad232987qq2155faj8w2qplwxzvg881f0yi0"; depends=[ggplot2]; }; sail = derive2 { name="sail"; version="0.1.0"; sha256="1wrh2dam5lblascqd8gl76jks72ys1amz84c6p08y8ykdmn2saq1"; depends=[gglasso glmnet]; }; + salbm = derive2 { name="salbm"; version="1.0"; sha256="06nizpphyn5q292b2kbsjax0ljw3340n655qwiyp8lvi2zcnl6jy"; depends=[randomForestSRC]; }; salem = derive2 { name="salem"; version="0.2.0"; sha256="1pk27d57bmds0jvnvwai2scjy798lb7w6lb84yxl4ccgyn1ldh45"; depends=[]; }; - salesforcer = derive2 { name="salesforcer"; version="0.2.2"; sha256="12s2knfyq4h33n7mfs1xjbvs1fh52dyw19y759z7l2bvmv27b71h"; depends=[base64enc curl data_table dplyr httr jsonlite lifecycle lubridate mime purrr readr rlang rlist tibble vctrs XML xml2 zip]; }; - salso = derive2 { name="salso"; version="0.2.20"; sha256="0vppjvmmafaadmcyykj8w2v1ay8fk3307lqpmg8z246w6hx94x96"; depends=[cargo]; }; + salesforcer = derive2 { name="salesforcer"; version="1.0.0"; sha256="12gc77d6kg7yb9hvbwibahslka8xfqzmwim4q6nkiyq9b0x5wliv"; depends=[anytime base64enc curl data_table dplyr httr jsonlite lifecycle lubridate mime purrr readr rlang rlist tibble vctrs XML xml2 zip]; }; + salso = derive2 { name="salso"; version="0.2.23"; sha256="19b3g37nm3nj255vpjgbzmwvyzybb8a3wff9qax6nw5fx9hb6zas"; depends=[]; }; salty = derive2 { name="salty"; version="0.1.0"; sha256="1dxq62yrkv416fy09l03slc7ci6mnwiyvjlsxhbqnj8yjy3kbhr6"; depends=[assertthat purrr stringr]; }; sambia = derive2 { name="sambia"; version="0.1.0"; sha256="15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln"; depends=[dplyr e1071 FNN mvtnorm pROC ranger smotefamily]; }; - samc = derive2 { name="samc"; version="1.3.0"; sha256="0sa63064v78d3gdcqivhy19bnrlvhihrs409b9rklrvh5wn3p039"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; + samc = derive2 { name="samc"; version="1.4.1"; sha256="0g6fqwyfjsb3pdws9vb2mnqv2967spiqzwin6bw94az1shmvpdnc"; depends=[gdistance Matrix raster Rcpp RcppEigen]; }; samon = derive2 { name="samon"; version="4.0.1"; sha256="1zhnv7kdpd2zhp6il5x56v4yh5703n1nsnkrysygns4i7xhvcf6z"; depends=[]; }; sampSurf = derive2 { name="sampSurf"; version="0.7-6"; sha256="1f2ndfrxz0v0di9sb17rxs3iik2qw2nj1dn7apl55b2d07nsmpk3"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.2-12"; sha256="1am1w8c24f27gcdmrk3b4wp9j5awghnw9s9lphnkm10pl31881dy"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; @@ -14951,11 +15570,12 @@ in with self; { samplingEstimates = derive2 { name="samplingEstimates"; version="0.1-3"; sha256="1srdchlpxksfdqhf5qdvl7nz0qsxkxww7hzqj0q71asbzlq3am3p"; depends=[samplingVarEst]; }; samplingVarEst = derive2 { name="samplingVarEst"; version="1.4"; sha256="0gzz0qz67h3vpdsi5g1w7fkyacj8789qxmj353q7pd0jm20q60l1"; depends=[]; }; samplingbook = derive2 { name="samplingbook"; version="1.2.4"; sha256="08fhzanzb725hlagm0225121gdgipkbfkixizwykggaimkz5j1ad"; depends=[pps sampling survey]; }; + sampsizeval = derive2 { name="sampsizeval"; version="1.0.0.0"; sha256="06mghabwqcc92hdvirm1gcna24hwll2gvm105ljkf5hgn0fa5xii"; depends=[dplyr plyr pracma sn]; }; samr = derive2 { name="samr"; version="3.0"; sha256="01km0f7qgm73x19vbvsxl083hs1dq4dj8qm5h64cxbf20b08my15"; depends=[GSA impute matrixStats openxlsx shiny shinyFiles]; }; - sams = derive2 { name="sams"; version="0.4.0"; sha256="1h0sg2q8yklffllwddlnx4d18lkc8lab5zc3pkh6xiwr9xg1fqas"; depends=[]; }; + sams = derive2 { name="sams"; version="0.4.2"; sha256="0k67vdjwnp7ljll87vjqb80axbcfgm05rgw5vadzn67dgghkqd0j"; depends=[]; }; samurais = derive2 { name="samurais"; version="0.1.0"; sha256="0s00hd3ax4r662n8iqmd9i56sgyjxbgc59la7qvh3jwcnzcvmgz9"; depends=[MASS Rcpp RcppArmadillo]; }; sand = derive2 { name="sand"; version="2.0.0"; sha256="0a8skj1wi1n9zlm7jb5cix1i4ssdzfpj4ym2854ala9jy6qj7g7n"; depends=[igraph igraphdata]; }; - sandwich = derive2 { name="sandwich"; version="3.0-0"; sha256="0afm6snak7r11dxyl3qirqdjah6d9pdv4afmxwam1nq9bqxyb3w2"; depends=[zoo]; }; + sandwich = derive2 { name="sandwich"; version="3.0-1"; sha256="12aa5083k3sfrfq1jy3l94wffss9h0rga8j71jy3n8pkhiq4nn7n"; depends=[zoo]; }; sanic = derive2 { name="sanic"; version="0.0.1"; sha256="05fd7jpi7cf9klfh6dqf8wklrjh5q1b3xqddxhdihcsqvcqhg48l"; depends=[Matrix Rcpp RcppEigen]; }; sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; }; sanityTracker = derive2 { name="sanityTracker"; version="0.1.0"; sha256="0y041x840sg5c05ksljb1y4xag1cib19q5ygp443k13ryfbcgs9k"; depends=[checkmate data_table]; }; @@ -14970,17 +15590,17 @@ in with self; { sapfluxnetr = derive2 { name="sapfluxnetr"; version="0.1.1"; sha256="00dywrfi6321v5xac7wll5yfwr7ffqhbscgv4akaijpqf44b5m2m"; depends=[assertthat dplyr furrr ggplot2 glue lubridate magrittr purrr rlang stringr tibble tidyr]; }; saqgetr = derive2 { name="saqgetr"; version="0.2.21"; sha256="0s7mmc8gqx89697wkv369x6sp3d1wha4q2zkkwikh835i3alx4zd"; depends=[dplyr httr lubridate magrittr purrr readr stringr tidyr]; }; sara4r = derive2 { name="sara4r"; version="0.0.8"; sha256="0b8ir25f0348pd2ckwzv1pyz3iz98zy09baih3rkgxxn8hjdnxj7"; depends=[raster rgdal RGtk2 sp]; }; - sarima = derive2 { name="sarima"; version="0.8.4"; sha256="0aysxgp34xn0gz9jxb2garprfzx61xmqnxlz2c2ay22llkc806dn"; depends=[dplyr FitAR FitARMA FKF Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; + sarima = derive2 { name="sarima"; version="0.8.5"; sha256="1850h8rly6kx8lsnpyh16nw69jhmgh5ggp9c8knqz2bm64s7xlwa"; depends=[dplyr FitAR FitARMA FKF Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; sarp_snowprofile = derive2 { name="sarp.snowprofile"; version="1.0.0"; sha256="02g7d5kilfkhqxm02jkhkraqbamxaj1qzzi150k6m55d5bfy4wih"; depends=[data_table xml2]; }; sarp_snowprofile_alignment = derive2 { name="sarp.snowprofile.alignment"; version="1.0.2"; sha256="1yh4ybnscjzps28ncqd46xzv88fjcn4bhcx6rwz8kl1m253c4wpl"; depends=[dtw sarp_snowprofile shiny]; }; - sars = derive2 { name="sars"; version="1.3.3"; sha256="112y6zj6ccn3gyl38zllkw4bmj7g7j18dipl79lvq7yjq5gxj17q"; depends=[AICcmodavg cli crayon doParallel foreach nortest numDeriv]; }; - sarsop = derive2 { name="sarsop"; version="0.6.8"; sha256="0bzi588qh18n48zxfg7v0kl9fwvl9iq70pn580vfg0ngz0gbgk3x"; depends=[BH digest Matrix processx xml2]; }; + sars = derive2 { name="sars"; version="1.3.5"; sha256="07jaagf3q8x4iwjh1avy5vzv9y62ipnjd43acbw0hizh983qlq3r"; depends=[AICcmodavg cli crayon doParallel foreach nortest numDeriv]; }; + sarsop = derive2 { name="sarsop"; version="0.6.9"; sha256="1rjpgicgy9vfi9q2vldrbbakybmazal5gh79p2kysnzhcr76v3z5"; depends=[BH digest Matrix processx xml2]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; - sasLM = derive2 { name="sasLM"; version="0.5.2"; sha256="15q5crglpj56vjl448bvjyy9k2w6qwymk5xg3wfp7ijczr2wqghq"; depends=[]; }; + sasLM = derive2 { name="sasLM"; version="0.6.3"; sha256="0p4k9mkdwm3zb647gsxra6vfpjnch57yckihbgrlaw3295g9s637"; depends=[mvtnorm]; }; sasMap = derive2 { name="sasMap"; version="1.0.0"; sha256="11vhhxhakqm1gsb3p4s4966sapmrqfyw79zfppbx5lnqi3xr0ngn"; depends=[readr stringi stringr]; }; sasfunclust = derive2 { name="sasfunclust"; version="1.0.0"; sha256="1ba7g3rxyq5h806na6bsdvh6mw6hydgcf3740qkfd4d5fx7m0mq4"; depends=[fda MASS Matrix matrixcalc mclust Rcpp RcppArmadillo]; }; - sass = derive2 { name="sass"; version="0.3.1"; sha256="1cxqwsdyz71mgflqqa65mfr161jlv8q9mshs1y19pxp6pz5wnv0s"; depends=[digest fs htmltools R6 rappdirs rlang]; }; - sassy = derive2 { name="sassy"; version="1.0.4"; sha256="18jfhi6v1haalaizlp4w178wm1gjxyj9nqy5wcblakr15rl54xda"; depends=[fmtr libr logr reporter]; }; + sass = derive2 { name="sass"; version="0.4.0"; sha256="0axw358bbk3vxsqg3wq0bz3xigasa6af8fxvi2ga8hli4cawl1kx"; depends=[fs htmltools R6 rappdirs rlang]; }; + sassy = derive2 { name="sassy"; version="1.0.5"; sha256="0f723qnj37vz2nzxkcjq735zs6bj1ks65ivzwr38qy3h0372gmq3"; depends=[fmtr libr logr reporter]; }; sate = derive2 { name="sate"; version="1.1.0"; sha256="0d1b0gp5abh5g7a25ff40xdnncrl2afjnlcc56dbhqkk43gjah17"; depends=[MASS]; }; satellite = derive2 { name="satellite"; version="1.0.2"; sha256="1ib9g4cplksf9ymp8hcv843lv5bpar31w8h4wnmya5hjsdmlfiv4"; depends=[plyr raster Rcpp]; }; satin = derive2 { name="satin"; version="1.0"; sha256="0ing5vhw8akrpy703fcwn5p0gadfabqb3abc9ircpgb6y2k5axzk"; depends=[geosphere lubridate maps maptools ncdf4 PBSmapping sp splancs]; }; @@ -14994,23 +15614,28 @@ in with self; { sbgcop = derive2 { name="sbgcop"; version="0.980"; sha256="0vmg8b4462qghlyx6hq0raf9xqvygzgwi5y0cbqcljhmbmqjrwxs"; depends=[]; }; sbioPN = derive2 { name="sbioPN"; version="1.1.0"; sha256="0yvg55xnkhm35hfl7rldy2grb26hm4a68jr4x9n45fs7hhdylxri"; depends=[]; }; sbl = derive2 { name="sbl"; version="0.1.0"; sha256="1wxzscii0kp55sngmjccrqvc8zm1zamfh406r12irrz2wbxwqnkw"; depends=[]; }; - sbm = derive2 { name="sbm"; version="0.2.2"; sha256="165c9032zy2ddzidqbaayx9ibf3njcwmv82rfdqg9nmrpcqrzblw"; depends=[blockmodels ggplot2 magrittr R6 Rcpp RcppArmadillo]; }; + sbm = derive2 { name="sbm"; version="0.4.3"; sha256="05vs90dhksn05499xivvibzx57kdiwm4y3xs421ra0aqfjkls8cf"; depends=[alluvial blockmodels dplyr ggplot2 GREMLINS igraph magrittr prodlim purrr R6 Rcpp RcppArmadillo reshape2 rlang stringr]; }; sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; sbo = derive2 { name="sbo"; version="0.5.0"; sha256="00pnvpcl6441gf8npf6b6cvzxh0kq4qbfxggjiqdny6lq2nl0d47"; depends=[dplyr Rcpp rlang testthat tidyr]; }; sboost = derive2 { name="sboost"; version="0.1.1"; sha256="126rqvpqwvwjxvsg1v04nkmd6af55j7sgx43jg2vnggyrlli9j9q"; depends=[dplyr Rcpp rlang]; }; - sbtools = derive2 { name="sbtools"; version="1.1.14"; sha256="0kz220phkqhbc0wfd73pj5g0cd2lzgy0xwyr56mzy03sc0plzvnk"; depends=[curl httr jsonlite stringr]; }; + sbtools = derive2 { name="sbtools"; version="1.1.17"; sha256="1i6jf0av3r413nh6kyhd2kxljaqbr401cnx5a33jb10vixsr56c7"; depends=[curl httr jsonlite stringr]; }; + sbw = derive2 { name="sbw"; version="1.1.5"; sha256="10ks912f4xiy0i484vf24w5zz9n7kxlcy77ikz95p8vr5zlqkvgc"; depends=[MASS Matrix quadprog slam spatstat_geom]; }; scBio = derive2 { name="scBio"; version="0.1.6"; sha256="1bpizxm9fbxd4sfapi1ayfg5csacb4dvqbvappd79jkq4mrsk12q"; depends=[doSNOW fields foreach LiblineaR limma raster sp]; }; + scCAN = derive2 { name="scCAN"; version="1.0.1"; sha256="08rrx3bk1w4lx886lvgc37xblq5hd68jrhg66yp5w16va5a97bqr"; depends=[FNN markdown purrr scDHA]; }; + scDHA = derive2 { name="scDHA"; version="1.1.2"; sha256="02iwkbh83h1xdckj30xg1azspq2v6sjrzpjgm6d1n14afgafv8x9"; depends=[cluster clusterCrit doParallel foreach igraph Matrix matrixStats Rcpp RcppAnnoy RcppArmadillo RcppParallel RhpcBLASctl torch uwot]; }; scDIFtest = derive2 { name="scDIFtest"; version="0.1.1"; sha256="1hq68g7zf7372cach2qfc7l1l8gh5aqkp66k0cxjnrhmvvb1qcax"; depends=[mirt sandwich strucchange zoo]; }; - scINSIGHT = derive2 { name="scINSIGHT"; version="0.1.0"; sha256="1y5ana6s4n2giwgjgfd781sxn7g009mi1cwbya53zsf2hb1bb2wz"; depends=[igraph RANN Rcpp RcppArmadillo stringr]; }; + scDiffCom = derive2 { name="scDiffCom"; version="0.1.0"; sha256="1xgrsfrh06n8hzyqv3j99kjk6l85khg099vjdsf7kx9f5p92iixd"; depends=[data_table DelayedArray future future_apply magrittr Seurat]; }; + scINSIGHT = derive2 { name="scINSIGHT"; version="0.1.1"; sha256="1a02013l648bz1h3nhflm1j0kdy48vg3y0x4gzjnhz1ihvnjngwl"; depends=[igraph RANN Rcpp RcppArmadillo stringr]; }; scLink = derive2 { name="scLink"; version="1.0.1"; sha256="0gcwx8kfik1lv949r9d9rqqnvrfkr4bj5cj2i9h1r7l1b76kna74"; depends=[glasso]; }; - scMappR = derive2 { name="scMappR"; version="1.0.1"; sha256="1kb03k84x0sz969f9fd1xpgizri4saj0yrhc99qf4adz9ynn7zfz"; depends=[ADAPTS downloader ggplot2 gProfileR gprofiler2 GSVA limSolve pbapply pcaMethods pheatmap reshape Seurat]; }; + scMappR = derive2 { name="scMappR"; version="1.0.2"; sha256="11mgviqbsawcfkr7ipv5i7ngabvr32pwqsx2hr31lifr0mq88p4h"; depends=[ADAPTS downloader ggplot2 gProfileR gprofiler2 GSVA limSolve pbapply pcaMethods pheatmap reshape Seurat]; }; scModels = derive2 { name="scModels"; version="1.0.2"; sha256="02nn8nv77fgmskx5zsa34ij9lzq9jiv8w2vmw5863v55khzvfs53"; depends=[gamlss_dist Rcpp]; }; + scPOP = derive2 { name="scPOP"; version="0.1.0"; sha256="0bi9dmqj9cd8f09qmfl3d65922xn3j3jipxi6615jbk6bz67kkh9"; depends=[cluster Matrix RANN Rcpp RcppArmadillo]; }; + scRNAstat = derive2 { name="scRNAstat"; version="0.1.1"; sha256="0yv5np7jafmygg77bwisrha5y2rdb1va906ngzs4zc8mvxr0dvlm"; depends=[clustree dplyr ggplot2 magrittr Matrix patchwork Seurat stringr]; }; scRNAtools = derive2 { name="scRNAtools"; version="1.0"; sha256="0x0lniqhq6q87y08kkkyvmk1g5b8i73hm3h86ba8rcv0v0n7ap9a"; depends=[ALL ConsensusClusterPlus corrplot edgeR foreach ggplot2 ggthemes Hmisc igraph lattice limma PerformanceAnalytics plyr reshape2 Rmisc Rtsne scatterplot3d survival TPEA]; }; scSorter = derive2 { name="scSorter"; version="0.0.2"; sha256="04gnw9i4j8sk3fjh74idk0d6wflw17z1c3afz6wir5pc4y3lzn2j"; depends=[]; }; scTenifoldKnk = derive2 { name="scTenifoldKnk"; version="1.0.1"; sha256="0d6gcr0qrm7mc36n2lihl7bq9vj40dblqswznbwvxichv8kc5svz"; depends=[MASS Matrix pbapply RSpectra scTenifoldNet]; }; scTenifoldNet = derive2 { name="scTenifoldNet"; version="1.2.4"; sha256="1gnikgfaf74d4sjdjjl34lwy9lcws4haff6x59x8bnjj7k7q219q"; depends=[MASS Matrix pbapply RSpectra]; }; scUtils = derive2 { name="scUtils"; version="0.1.0"; sha256="09c4vwrjj4r0nfcwb8q0a243m0v5wa3qisdlcy7ik58gyxp02zv8"; depends=[assertthat dplyr ggplot2 Matrix scales viridis viridisLite]; }; - scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scaffolder = derive2 { name="scaffolder"; version="0.0.1"; sha256="1va1mlhqv5qn0hm81ypdir9llr68222qxjp3jink69zpaskfbdib"; depends=[reticulate]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4.1"; sha256="1azg1xlid63l9mcyns9yyl3a3hykbl0sl0h5jhyvzjzahfyanq53"; depends=[rJava]; }; scaleAlign = derive2 { name="scaleAlign"; version="1.0.0.0"; sha256="0340biwz0md6sxq5iq5wiz6q8kcrll80429f1ab9zz88k3fya2s6"; depends=[]; }; @@ -15018,18 +15643,18 @@ in with self; { scales = derive2 { name="scales"; version="1.1.1"; sha256="019ps0njjc0rzrjygqiyn8b9vp0c3c0jd56h1yi19wzi49jvdcj0"; depends=[farver labeling lifecycle munsell R6 RColorBrewer viridisLite]; }; scalpel = derive2 { name="scalpel"; version="1.0.3"; sha256="0c8k99i5v2ki2bmcjjr6rfk7y1ds7jlykdwgn5x2zvzpdw7p4vlw"; depends=[gam igraph Matrix protoclust R_matlab]; }; scalreg = derive2 { name="scalreg"; version="1.0.1"; sha256="0kfcgl9cpp6g1qx23s1yrjzn0hi74vmrw567vy9wpsmhk04a5bkx"; depends=[lars]; }; - scam = derive2 { name="scam"; version="1.2-11"; sha256="1h8s9azbxw601iqw8pgq2wqil9s6jmmmazs36lwkv2i7k1zldbdm"; depends=[Matrix mgcv]; }; - scan = derive2 { name="scan"; version="0.51"; sha256="16s9b1djww1fiik9ycwp8nr4jalv35pzxmyvvgsckzl0wk53dqmn"; depends=[car kableExtra knitr MASS mblm nlme readxl]; }; + scam = derive2 { name="scam"; version="1.2-12"; sha256="0jlgx2v3jm8yk3gc7sk4mnlahd1cnarbakj2353qhw0k492gir8c"; depends=[Matrix mgcv]; }; + scan = derive2 { name="scan"; version="0.53"; sha256="1j5wldd62lf1f73vdhsk1pklnq10di2m2wj4jwjy8vn7gcxianqj"; depends=[car kableExtra knitr magrittr mblm meta nlme readxl]; }; scape = derive2 { name="scape"; version="2.3.3"; sha256="1jb5c335qsbrpsgngs8c1qlibyb7zvvx6mwydfhm1plx4pkcq0n1"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; - scatterD3 = derive2 { name="scatterD3"; version="0.9.2"; sha256="1w4rr1v6capg4jkb1fj3ijvk6aj8nbw79kg731bcff1vjp8n04hy"; depends=[digest ellipse htmlwidgets]; }; + scatterD3 = derive2 { name="scatterD3"; version="1.0.0"; sha256="0n1azszfmvy65mjgplfr8g1izam34v9903ng0zz6sx5r9dyh7py0"; depends=[digest ellipse htmlwidgets]; }; scattermore = derive2 { name="scattermore"; version="0.7"; sha256="18nzlprmphkvjg946h10h2qq0wbkmv2526p8di6k2xl4gccq0qpk"; depends=[ggplot2 scales]; }; - scatterpie = derive2 { name="scatterpie"; version="0.1.6"; sha256="1lilzybbxqhrjpwwf9050wf5f896pn5d93llp5da7ssrcn5bm9i8"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; + scatterpie = derive2 { name="scatterpie"; version="0.1.7"; sha256="1pmspv8a7k20zyd5xvmav2k9mnjrkfhdij3rr9k504zyki8hfy1z"; depends=[ggforce ggfun ggplot2 rlang tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; scbursts = derive2 { name="scbursts"; version="1.6"; sha256="09yxnq6m35xmp0priavjnh0bdcwkr5hhy7j33cz13xwkrd1cgw5j"; depends=[readxl tibble]; }; scclust = derive2 { name="scclust"; version="0.2.2"; sha256="0w0qwz8wfdprs2bgv1cjvd2yb6g12jylad21a9rr3w5bkgxprcrp"; depends=[distances]; }; - sccore = derive2 { name="sccore"; version="0.1.2"; sha256="01rswkzl836vhad4gaizxp6cbi0qywqdmdcjlbinbbpgrd598v0m"; depends=[dplyr ggplot2 ggrepel igraph irlba magrittr Matrix pbmcapply pROC Rcpp RcppArmadillo RcppEigen RcppProgress rlang scales tibble uwot withr]; }; + sccore = derive2 { name="sccore"; version="0.1.3"; sha256="1j8k02w3ir1ga58cavabka3zx5cygyyq7sj364rgr4xfphcd1i26"; depends=[dplyr ggplot2 ggrepel igraph irlba magrittr Matrix pbmcapply pROC Rcpp RcppArmadillo RcppEigen RcppProgress rlang scales tibble uwot withr]; }; sccr = derive2 { name="sccr"; version="2.1"; sha256="0cjlzv92b5qrs43d3ry33zcggiqvsqaf8wq4k19ws9lvgh59b62v"; depends=[dplyr]; }; scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; scdhlm = derive2 { name="scdhlm"; version="0.5.2"; sha256="147kqr65gxy44nj9rj4jbw590pbqspli4dpkgdq4hj9x1daww2ql"; depends=[lmeInfo nlme readxl]; }; @@ -15038,10 +15663,10 @@ in with self; { schemr = derive2 { name="schemr"; version="0.1.0"; sha256="0w29la0mh5bvij52r8jgfl47cgm0xc53702ms5r4jv0pdd49qlg8"; depends=[apcluster dplyr ggplot2 magrittr OpenImageR purrr stringr]; }; schoRsch = derive2 { name="schoRsch"; version="1.9.1"; sha256="0f823z48s50jhcphqqivchrmkiwqg25nc01c17kjpzzryd2fi5zs"; depends=[]; }; schoenberg = derive2 { name="schoenberg"; version="2.0.2"; sha256="17pbw9266r9lv9blygmvq9285kcrcy07jaqrj3zfa2pg0zyvhjvm"; depends=[crayon]; }; - scholar = derive2 { name="scholar"; version="0.2.1"; sha256="1cv1n6mzijqf202krf37ml2l51zpnp69qz0aki1dvkjj3g79zfr9"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; + scholar = derive2 { name="scholar"; version="0.2.2"; sha256="1irigcws62sz1ai3ci80cdgwgisnra8kylqb2hxx3h62ddlpzhg7"; depends=[dplyr ggplot2 ggraph httr R_cache rvest stringr tidygraph xml2]; }; schoolmath = derive2 { name="schoolmath"; version="0.4"; sha256="06gcmm294d0bs5whvknrq48sk7li961lzy4bcncjg052zbbpn67x"; depends=[]; }; schrute = derive2 { name="schrute"; version="0.2.2"; sha256="1j1bb7inhxq355kvqmp45zgxz41d3rpbh2rxk9wkahsbiy0cdybn"; depends=[dplyr ggplot2 magrittr stringi stringr tibble tidyr tidytext]; }; - schumaker = derive2 { name="schumaker"; version="1.2"; sha256="1whfmnjmib7lh72src7cnbw3mswzaxq8vd50x5x9cv0031n0y6l7"; depends=[]; }; + schumaker = derive2 { name="schumaker"; version="1.2.1"; sha256="15i39lzkd1qggd35sp39vy922y3y1n9drjkidz7asniv1miali6j"; depends=[]; }; scico = derive2 { name="scico"; version="1.2.0"; sha256="1l7vin8zjnv3zhgv81v6qrx6nysd2kx10na1pfn6mmxvr1bsj9jp"; depends=[]; }; scientoText = derive2 { name="scientoText"; version="0.1"; sha256="0f18hg9s50lbbgl0fqjv45yhynpnsxj8wwm07g126snzr68gbd21"; depends=[stringr tm]; }; scifigure = derive2 { name="scifigure"; version="0.2"; sha256="1zc88r1lnb0cws130hq4rjc34rrp6zkmi8yhkwsm3vkznbhi4iba"; depends=[]; }; @@ -15051,16 +15676,17 @@ in with self; { scoper = derive2 { name="scoper"; version="1.1.0"; sha256="0ls1c4h7l5wk6y4yw8278rg3kyk96508pc9cd4k68kncj302xj26"; depends=[alakazam data_table doParallel dplyr foreach ggplot2 Rcpp rlang scales shazam stringi tidyr]; }; scopr = derive2 { name="scopr"; version="0.3.3"; sha256="1j45l5zcrpc4dnb6ik1v0jlqizpkijl0p656s869jhhvv55r6v2i"; depends=[behavr data_table memoise readr RSQLite stringr]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.3.2"; sha256="0ab5f61684x4dwfry0ni39c46s18nrki7vjivpdd5i2gzdp6q4d1"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx stringi]; }; + scorecard = derive2 { name="scorecard"; version="0.3.5"; sha256="0zsmjdcsprpnggznwiy4m21r7vryx17chz2s3q2ny74gdjpyc0z2"; depends=[data_table doParallel foreach ggplot2 gridExtra openxlsx stringi]; }; scorecardModelUtils = derive2 { name="scorecardModelUtils"; version="0.0.1.0"; sha256="09znaxrv14m58hsk5pac458xbpcsidc6ygcsw4q9j0p4yd80qbvl"; depends=[car e1071 gbm ggplot2 partykit randomForest reshape2 sqldf stringr]; }; scorepeak = derive2 { name="scorepeak"; version="0.1.2"; sha256="1g9n7kjqb9qk5b7hw8ysrc069w9dzc4z29ay6z1kbm0v4kkzp7bi"; depends=[checkmate Rcpp]; }; scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; scoringRules = derive2 { name="scoringRules"; version="1.0.1"; sha256="0rc8nz68h56mzsr7hyga77n0i05rq3hjkzaqx78bihzcwqd9vji7"; depends=[knitr MASS Rcpp RcppArmadillo]; }; scoringTools = derive2 { name="scoringTools"; version="0.1.2"; sha256="11bxmpqiqqkjyvmyxlnzz7j64jmy1pjw06128vvydmqhjxxyawjh"; depends=[discretization dplyr magrittr sqldf]; }; - scoringutils = derive2 { name="scoringutils"; version="0.1.4"; sha256="0rm618rs395v5n5cbnkqb7l903c7hyxpy5hg55b8kfmzmv891liv"; depends=[data_table forcats ggplot2 goftest scoringRules]; }; + scoringutils = derive2 { name="scoringutils"; version="0.1.7.2"; sha256="1njdvy6fzw20xb13mpdqczvap88jfxxnid31nmrkq9yzjdigjv2c"; depends=[data_table forcats ggplot2 goftest scoringRules]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; scpm = derive2 { name="scpm"; version="2.0.0"; sha256="1ib46m3i50annp90n2ih4qdxabxik4ngg9j0a5hgspsvk1i4hrvp"; depends=[interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; - scraEP = derive2 { name="scraEP"; version="1.1"; sha256="0dimvdjlgaymjmd3gf60hxcavpr58bpffrfhlksnrfzbb7an65dd"; depends=[data_table RCurl XML]; }; + scqe = derive2 { name="scqe"; version="1.0.0"; sha256="1113zbc2jyq03fh8l1h6yidf25hh5dcqrk6wkk9flqwnbrvfkwrr"; depends=[AER ggplot2]; }; + scraEP = derive2 { name="scraEP"; version="1.2"; sha256="1qkfd4bp3sd3xrh9bdaqwmmvx7f9rvjcch6hi2p387ky04ywwqn4"; depends=[data_table rvest XML xml2]; }; scrapeR = derive2 { name="scrapeR"; version="0.1.6"; sha256="1rqgqpn9rc43rh356z9gb51pjhdczr9a9mgv0i078nniq156rmlb"; depends=[RCurl XML]; }; scrappy = derive2 { name="scrappy"; version="0.0.1"; sha256="0dckq2pdqabnv5cinfqgbrjxp55x4z81lp8xh4yhyb2cnz9gdsqy"; depends=[magrittr rvest xml2]; }; scrime = derive2 { name="scrime"; version="1.3.5"; sha256="0y2mh9fsffjf3i15bafpasa17z99c1s75r8g6h4hgcwfgpjx75sx"; depends=[]; }; @@ -15068,32 +15694,30 @@ in with self; { scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; scriptexec = derive2 { name="scriptexec"; version="0.3.1"; sha256="0k10x0npdga1nmchzz9xxv0qijnq2n9pb49z1g06bmva1z8wb4wg"; depends=[]; }; scriptuRs = derive2 { name="scriptuRs"; version="0.1.0"; sha256="1wbvfqcc0raazhdc6pyp93q859ilxfz9rz338p3sb7fjyxvparbl"; depends=[]; }; - scrm = derive2 { name="scrm"; version="1.7.3-1"; sha256="090gsa23l9s4x92q4n7ggp491fc8ghgnjw5p7j67gd1i1iwr55n8"; depends=[Rcpp]; }; - scrobbler = derive2 { name="scrobbler"; version="1.0.1"; sha256="1p3rn57khr0793kydi4i7iarpkyh6y72yq3fvfnaz8kfrf3s4jym"; depends=[httr jsonlite]; }; + scrobbler = derive2 { name="scrobbler"; version="1.0.2"; sha256="14nnqcjrcc5xcdn2swwj0j2jsw5maayd9ba06s6d5i88png2xhv5"; depends=[httr jsonlite]; }; scrollrevealR = derive2 { name="scrollrevealR"; version="0.2.0"; sha256="0k8ffapwxpb25wphm76arma095hrh3wf0gpkx1z6g4rplahf4jxa"; depends=[glue htmltools]; }; - scrubr = derive2 { name="scrubr"; version="0.3.2"; sha256="1grh6gljxad2iig6vldv2j0wk83cj6v1pdqsldb6gp4kqyzbikq9"; depends=[crul curl data_table fastmatch hoardr jsonlite lazyeval magrittr Matrix qlcMatrix tibble]; }; scrypt = derive2 { name="scrypt"; version="0.1.3"; sha256="14iblgbp9v2by8fjbrpsd59iknp5babcz7j3yv1yxxzcwyb6wrrm"; depends=[Rcpp]; }; scs = derive2 { name="scs"; version="1.3-2"; sha256="10z5619gbnnygk8pkdx2qji56jlv1q6c1z4581pdkd9sfnhg1yp3"; depends=[]; }; sctransform = derive2 { name="sctransform"; version="0.3.2"; sha256="1p3m6i28nlxh6r609syn88cwlbdpl3dw44dy3gsijk2ibq20mfsx"; depends=[future future_apply ggplot2 gridExtra MASS Matrix matrixStats Rcpp RcppArmadillo reshape2]; }; - scuba = derive2 { name="scuba"; version="1.10-0"; sha256="1ckq8lc92wpb6rimi5n70qnxngvdl38nrwfwayn7c7jh40ywn9fk"; depends=[]; }; + scuba = derive2 { name="scuba"; version="1.11-0"; sha256="0g2n8clr2c0cb0jvfz1g9zv8m72yqwmb3p726k89dzma2lkyramd"; depends=[]; }; + scutr = derive2 { name="scutr"; version="0.1.2"; sha256="0wq20zvn839iws9qzaknfisr9r2pipdcvxfjvqmk1bw9irfgj3gm"; depends=[mclust smotefamily]; }; sdPrior = derive2 { name="sdPrior"; version="1.0-0"; sha256="0g4crlasnvxz752n3az5jc681jvvj2g87c3a8s2h1i2vh64p5h37"; depends=[doParallel GB2 MASS mgcv mvtnorm pscl]; }; sdStaf = derive2 { name="sdStaf"; version="1.0.2"; sha256="0r7lqj30r3f0b18kpahi63zsdizcw2zjf1vvvs04s4cg1djjbcp3"; depends=[dismo dplyr ggplot2 raster rasterVis rgdal rgeos sp tidyr]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; sdafilter = derive2 { name="sdafilter"; version="1.0.0"; sha256="0y692j25pln46dp6xvaq17fkym0461yqfa6rv5avfw2b240k8jiq"; depends=[glasso glmnet huge POET]; }; sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; - sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.18.3"; sha256="0snsl790ivx21dynryscy9arc8bmfh4pigh6j9m3b8lls8alcpqz"; depends=[cli data_table jsonlite rlang shiny shinyjs shinythemes shinyTree]; }; - sdcLog = derive2 { name="sdcLog"; version="0.2.0"; sha256="1awziy3193hj2ws63fzlpa93m12hvxqd9plr4abmwhgshnj0x680"; depends=[broom checkmate crayon data_table]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.6.0"; sha256="01rm6r0cdqq8sg81q4ypk4z8fvfh60bckr16ysih4qd6yivc4mny"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; + sdcHierarchies = derive2 { name="sdcHierarchies"; version="0.19.1"; sha256="128mxm7iphg7c5jxpfakdnldc995gdcrlnfaxddw7csvzv547dwa"; depends=[cli data_table jsonlite Rcpp rlang shiny shinyjs shinythemes shinyTree]; }; + sdcLog = derive2 { name="sdcLog"; version="0.3.0"; sha256="1cy6iwkk35p9hr4g64hnc4jr9bnnlqv4gdra4n3r6bjhkds78r1q"; depends=[broom checkmate crayon data_table]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.6.1"; sha256="12maw34ibsa2fpdxy4ww8nbsllfvcjvf5idg4m4z0fjsbmd7li51"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase shiny shinyBS VIM xtable]; }; sdcSpatial = derive2 { name="sdcSpatial"; version="0.1.1"; sha256="1szv2nb758k3x5scxml2ns11fi99rlmd11r3fhzy3dgylf0m0xnm"; depends=[raster]; }; - sdcTable = derive2 { name="sdcTable"; version="0.31"; sha256="064aippj8p4mc1zazvkzcjz59hlfybsz6wz1ppwj6d9638ha1a96"; depends=[data_table knitr lpSolveAPI Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; + sdcTable = derive2 { name="sdcTable"; version="0.32.0"; sha256="1p012yxc4hbnj6d47qr7dwz7hx9x9glgbs6p9rp7qz5adcl38pwn"; depends=[data_table glpkAPI knitr lpSolveAPI progress Rcpp Rglpk rlang sdcHierarchies slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.7"; sha256="0x2b8shp02ik0dd11wi3jcrl9h9m963fnkfy47fwwhav9x6jg0jf"; depends=[]; }; - sdetorus = derive2 { name="sdetorus"; version="0.1.7"; sha256="1ip9wi44m64qhyl5mcvpm5kk0j7qmkrh3fq572jkq8w0csg59p4b"; depends=[colorRamps mvtnorm Rcpp RcppArmadillo]; }; - sdglinkage = derive2 { name="sdglinkage"; version="0.1.0"; sha256="102li274s9jjxqabk8ggv9mrdd4014d5hp0hqsna4swly8zvdcyn"; depends=[arsenal bnlearn ggplot2 reshape synthpop visNetwork]; }; + sdetorus = derive2 { name="sdetorus"; version="0.1.8"; sha256="1bf622k9szas3bfxz9f82dn28l1hdqxzpvgqwvzygy9vp2gi4gyp"; depends=[colorRamps mvtnorm Rcpp RcppArmadillo]; }; sdm = derive2 { name="sdm"; version="1.0-89"; sha256="1qi2hc06wnyz9apfpbypngvs8w20r1jq3mr6l6xpjdyg6ks1m0rc"; depends=[raster sp]; }; - sdmApp = derive2 { name="sdmApp"; version="0.0.1"; sha256="0mi9nfhdl2lp6ax34xc61q05n5jnwabizad2p5shvy6jzzirngbz"; depends=[biomod2 blockCV CENFA data_table dismo DT ggcorrplot ggplot2 ggpubr haven kernlab randomForest raster readxl rgeos rhandsontable rJava sf shiny shinyBS shinyFiles sp SSDM tidyverse]; }; - sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.9"; sha256="1hpypfzfn0vppwkfrd1bcf2qzwl81603sf3l8xg8md25f3x9gw91"; depends=[R_utils raster RCurl rgdal]; }; + sdmApp = derive2 { name="sdmApp"; version="0.0.2"; sha256="1rfzy3bbdya7amyr43dhhv4cvmrxcan0fv167ldpbf0m9snqrnrx"; depends=[raster shiny sp]; }; + sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.10"; sha256="12isgysfpmaj7r5zvs9mc3cd8jkinqqhmhzmfdvabddman6whhzk"; depends=[R_utils raster RCurl rgdal]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; sdpdth = derive2 { name="sdpdth"; version="0.2"; sha256="1yn8fsjxpbagargf3mv0p23vsgnl64dxfkggrzvfp0ylxsx8nnvc"; depends=[Matrix matrixcalc rCMA Rcpp RcppArmadillo rJava]; }; sdprisk = derive2 { name="sdprisk"; version="1.1-6"; sha256="061x78irryc5phd8bv9cs2mfgiajgwmr85ryp1r47anadydb2haa"; depends=[numDeriv PolynomF rootSolve]; }; @@ -15104,34 +15728,33 @@ in with self; { seagull = derive2 { name="seagull"; version="1.1.0"; sha256="1kmidbxzs8zrjji6wsn8nrdv5mpfmmf6q30h1w4rc0swx1ycsgx4"; depends=[matrixStats Rcpp RcppArmadillo]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; searchConsoleR = derive2 { name="searchConsoleR"; version="0.4.0"; sha256="1ffg5359pbwylw265wbahwl3hy1b0qqv4al71v5r8lgfircibn0j"; depends=[googleAuthR stringr]; }; - searcher = derive2 { name="searcher"; version="0.0.5"; sha256="1q12il35pfy34n669jzkjciln1ca8by7l1d8zkzv4297547i1qln"; depends=[]; }; + searcher = derive2 { name="searcher"; version="0.0.6"; sha256="03q9nq5zkj344swq3ppliz6dhwaddls8xv633s6brccmrcgdaivm"; depends=[]; }; seas = derive2 { name="seas"; version="0.5-2"; sha256="0hn4d5dc01zyycd7l3vj1sx6bq668n7fzffw9ypaa5l20fizs0ay"; depends=[MASS]; }; - season = derive2 { name="season"; version="0.3.12"; sha256="0hv4qcparkfyvwqd583lqwy7djziwi0cyaycg9ds3jjsfypwp31a"; depends=[ggplot2 MASS survival]; }; - seasonal = derive2 { name="seasonal"; version="1.8.2"; sha256="0jzzbypwi4mby58spv99l4xrfp6zrkrylgmc6imr9ybhwh6lihws"; depends=[x13binary]; }; + season = derive2 { name="season"; version="0.3.13"; sha256="0sn10vxdqvds162i4d7jg6if15h9p8fxia27ihlr4kfyp9113g98"; depends=[ggplot2 MASS survival]; }; + seasonal = derive2 { name="seasonal"; version="1.8.4"; sha256="1mqlck752d9hmzmkmjw9qq7g9kkrwbzglsm7sx0xc03qbm5zxd3k"; depends=[x13binary]; }; seasonalclumped = derive2 { name="seasonalclumped"; version="0.3.2"; sha256="0a9ryds9l00dw6pr9s6r6fzrby53zz63idjywh127a4ga48jwnq3"; depends=[ggplot2 gridExtra magrittr TTR]; }; seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; - seastests = derive2 { name="seastests"; version="0.14.2"; sha256="04kx4sijnpsarq4iaclxvckgr5y0gmz5a0fmkkqjmfi3hm1kvw3d"; depends=[forecast xts zoo]; }; + seastests = derive2 { name="seastests"; version="0.15.4"; sha256="1xy2hacd57v75y5snhn4al7bi71wr994jy6m2sdr6qzzsd5pbgpc"; depends=[forecast xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="2.0.2"; sha256="1x4vvassal1lwb9xnwisrhlx2maaqxl84h7klfy8yg9x80fdrhsw"; depends=[lubridate plyr reshape2 rms survival]; }; - secr = derive2 { name="secr"; version="4.4.1"; sha256="1ir72gfi5wpjmkprjd7zazdhq2dyz0yxpikrsxgvg9dhhb2w0y9h"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; + secr = derive2 { name="secr"; version="4.4.5"; sha256="1rvrbc04mb5cahg46sqv599y56nhj7132vgqjgn5jxbilfm3pjs9"; depends=[abind MASS mgcv nlme raster Rcpp RcppEigen RcppNumerical RcppParallel sp stringr]; }; secrdesign = derive2 { name="secrdesign"; version="2.5.11"; sha256="02fysbx6w1iw2ig54f9sgr74c40wfjwiwpdmxdjymsaynqnm9anl"; depends=[abind openCR secr]; }; secret = derive2 { name="secret"; version="1.1.0"; sha256="063gpyc2s2l6zw1j8b8ppzsv9kjsf0s77s5wcn7ipmwkj8qr2g4b"; depends=[assertthat curl jsonlite openssl rprojroot]; }; secrettext = derive2 { name="secrettext"; version="0.1.0"; sha256="129v524yyb464mcij7hvzv05cxliaz5nm7v30g9g9ppskcdqhsx2"; depends=[dplyr magrittr rlang stringr testthat tidyr]; }; secrlinear = derive2 { name="secrlinear"; version="1.1.4"; sha256="1qa0vapnhiblz57jrbj9zd1gdmxc1nzzq41b4464373pjfvm5wvj"; depends=[igraph maptools MASS rgdal secr sp]; }; - secsse = derive2 { name="secsse"; version="2.0.7"; sha256="0hgrk4hvl89gmlfzabhdmxxp4k00wlciy0x0fv4k4slcskvyax8v"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; + secsse = derive2 { name="secsse"; version="2.1.7"; sha256="0cad1flym8bhra11chc16ylfa3i0nhi9jyy6r4nacwh6qpbbavjg"; depends=[ape apTreeshape DDD deSolve doParallel foreach geiger phylobase]; }; secuTrialR = derive2 { name="secuTrialR"; version="1.0.9"; sha256="0g84jrh42kx3w1m6spw80rwx7vzjf7x1qabqap4h6ayrczacxq4r"; depends=[dplyr haven lubridate magrittr purrr readr readxl rlang stringr tibble tidyr]; }; secure = derive2 { name="secure"; version="0.6"; sha256="1i0csl90w4qvhpnrxwrdhxzlmjw7hn30py36r41cd28igycz2bw3"; depends=[MASS Rcpp RcppArmadillo]; }; - securitytxt = derive2 { name="securitytxt"; version="0.1.1"; sha256="0yrydcc68qcsq5wrdfgwfi347pdd0zc8hp2ikmw3iz31anm3b4yw"; depends=[Rcpp]; }; - see = derive2 { name="see"; version="0.6.3"; sha256="0xkc7fjwy2l6hxqb3vgz5kfvlr672ia4jplhjqdds8z0lkly3fjk"; depends=[bayestestR dplyr effectsize ggplot2 ggridges insight magrittr parameters rlang]; }; + see = derive2 { name="see"; version="0.6.7"; sha256="0wf21jf6j3p75yx59rp5x6kxv5df5a8fv6pmm65zv8pfi53dwbj8"; depends=[bayestestR datawizard effectsize ggplot2 ggridges insight parameters rlang]; }; seeclickfixr = derive2 { name="seeclickfixr"; version="1.1.0"; sha256="1agsqq2msrqrssffc6liyjjs6nqm90xy2inlcjbkdac5dhinjc4n"; depends=[jsonlite RCurl]; }; seecolor = derive2 { name="seecolor"; version="0.1.0"; sha256="1ijxyys8pwlm99ynmv86cgn8pzz1ivaxzh3rq1akzv17nz93jv61"; depends=[crayon dplyr fansi ggplot2 magrittr purrr rstudioapi stringr]; }; seedCCA = derive2 { name="seedCCA"; version="3.0"; sha256="076pkv083dp71m6ifjzx9spfwmc1625r9d72spf0vhf8pwwsha4v"; depends=[CCA corpcor]; }; seededlda = derive2 { name="seededlda"; version="0.6.0"; sha256="1xbjwarf39w3dgsr7rr5i0q5jbza2rfaxkw66h4gg7bbi5v3kwzi"; depends=[Matrix quanteda Rcpp RcppArmadillo RcppParallel]; }; seedr = derive2 { name="seedr"; version="0.3.0"; sha256="15drbc0iplb97a2sym6jnrwij7ak5qckcw98n3m65x45apjwdmhq"; depends=[binom data_table]; }; - seedreg = derive2 { name="seedreg"; version="1.0.0"; sha256="1plva3fp0khq61w4c60yyk33wwf1rkazs92wcpf8xy9qkxa5d62p"; depends=[boot car crayon drc emmeans ggplot2 hnp multcomp multcompView]; }; + seedreg = derive2 { name="seedreg"; version="1.0.2"; sha256="16nr2hkwc0vfkd76ky592r1ymlmpakvxsmammih3fii9d4l8mlab"; depends=[boot car crayon drc emmeans ggplot2 hnp multcomp multcompView stringr]; }; seeds = derive2 { name="seeds"; version="0.9.1"; sha256="0adk7y5ripg78bwkdgnlfwq9w9h6mlpdrikgbnn5z8az2qahc0in"; depends=[callr coda Deriv deSolve dplyr ggplot2 Hmisc MASS matrixStats mvtnorm pracma R_utils Ryacas statmod tidyr]; }; seedwater = derive2 { name="seedwater"; version="2.0"; sha256="1q6q612245hqqx89jzlp77f73vj2baxi0bghd9l8kpjz4ydh6rv8"; depends=[rpanel]; }; - seer = derive2 { name="seer"; version="1.1.5"; sha256="19p6gvi3g1fjzi3rb1xm4svff7nb0bcmbf4fzijvqpzkz0gpi10k"; depends=[dplyr forecast forecTheta furrr future magrittr MASS purrr randomForest stringr tibble tsfeatures urca]; }; - seewave = derive2 { name="seewave"; version="2.1.6"; sha256="123h3q0gps0vy9sikr7gjphnv9m3l4h4mykiydjllmrpaw1s1844"; depends=[tuneR]; }; + seer = derive2 { name="seer"; version="1.1.6"; sha256="1919riap2fv4f9z239jam7qzm2ibgzasirjfi7jkypmw6a1kp5hc"; depends=[dplyr forecast forecTheta furrr future magrittr MASS purrr randomForest stringr tibble tsfeatures urca]; }; + seewave = derive2 { name="seewave"; version="2.1.8"; sha256="1szcvryvl4kb3av2pcvl14bz6whl7xrq4wb1ck6w7lfc4mrlirhh"; depends=[tuneR]; }; seg = derive2 { name="seg"; version="0.5-7"; sha256="165hl55vzyf3jqlykqji37p2syzhc8dxdjxd4wwr562qnlymzszx"; depends=[sp splancs]; }; segMGarch = derive2 { name="segMGarch"; version="1.2"; sha256="0chw41h25jka9wa3rf3d8dq2ym47379jflv33q6qxaak8xy1kmd9"; depends=[corpcor doParallel fGarch foreach iterators mvtnorm Rcpp RcppArmadillo]; }; segRDA = derive2 { name="segRDA"; version="1.0.2"; sha256="0az27z4pppyz5slckwmgk6qqix710m1s96drlq4fh8bqn2qmz812"; depends=[vegan]; }; @@ -15140,15 +15763,14 @@ in with self; { segmenTier = derive2 { name="segmenTier"; version="0.1.2"; sha256="01xbcddinjbkbqkwq2lnsxd3gw8fxys58p498dc2lw8psz3g2wgc"; depends=[Rcpp]; }; segmented = derive2 { name="segmented"; version="1.3-4"; sha256="0bchqcy308kbywavgyg9kb4543rbkfn753q9c6d7l7aw7sxvyxl2"; depends=[]; }; segmentr = derive2 { name="segmentr"; version="0.2.0"; sha256="0q5kxxiw0akpk7w2a2l9zp7v4pvqblzdvrld5fjyl5f6h8hsb40z"; depends=[foreach glue Rcpp]; }; - segregation = derive2 { name="segregation"; version="0.5.0"; sha256="0k7s5ph0ig7vzccqprz394h9hryn7lhd5w07lym3xp37xcpk5vc7"; depends=[data_table]; }; + segregation = derive2 { name="segregation"; version="0.6.0"; sha256="0yajbbrbrkk6blb6r5y5fwvfz0j8kbc8fr91kb4f53j1afcbbhbx"; depends=[data_table]; }; segregatr = derive2 { name="segregatr"; version="0.2.0"; sha256="02hdwbahcym98f20nnxnn94xsrl4x6gzz26wrg2nhj2cq20fl4s4"; depends=[pedprobr pedtools]; }; seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; }; seismicRoll = derive2 { name="seismicRoll"; version="1.1.4"; sha256="036yvfgy6d4dppfgqd8yx08k3mb03p44hch1ihcmmramz5cvdc29"; depends=[Rcpp]; }; sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; }; - selac = derive2 { name="selac"; version="1.7.5"; sha256="1r9g6sdm3341r7666hfpcy17yprsyckhbmb2mpa93kkj5b6pd7pl"; depends=[ape data_table deSolve expm GenSA MASS Matrix nloptr nnet phangorn RColorBrewer seqinr statmod zoo]; }; selectMeta = derive2 { name="selectMeta"; version="1.0.8"; sha256="0i0wzx5ggd60y26lnn4qk4n8h27ahll9732026ppks1djx14cdy0"; depends=[DEoptim]; }; selectapref = derive2 { name="selectapref"; version="0.1.2"; sha256="0njibljh3hiqdn4wdb031bdg1bh3xpixgczbi5i01gaavybsq4cc"; depends=[]; }; - selection_index = derive2 { name="selection.index"; version="1.1.0"; sha256="1k31j234f0i9rgna43apgbvgd9g9g7cs6a8myzadrpjkg2zg4vj0"; depends=[]; }; + selection_index = derive2 { name="selection.index"; version="1.1.3"; sha256="0zvb6wr7ga5618v8rwdvc2bk7gw19gn3kpfn584cfac9j933m62v"; depends=[]; }; selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; selectiveInference = derive2 { name="selectiveInference"; version="1.2.5"; sha256="07kzpvdmflca1sriqfzn20f84fx2b9kwwiqm91lqjpx854bsx5kh"; depends=[adaptMCMC glmnet intervals MASS Rcpp survival]; }; selectr = derive2 { name="selectr"; version="0.4-2"; sha256="09y1n3iy297g49xlpl7xrjpwgnm57pskx5991lyfcpizbz8ax22m"; depends=[R6 stringr]; }; @@ -15163,28 +15785,29 @@ in with self; { semPlot = derive2 { name="semPlot"; version="1.1.2"; sha256="0l1v9yi1pv59iwfknw4dh9qskk5y8r347jq1vq13gnfd3bmd71xr"; depends=[colorspace corpcor igraph lavaan lisrelToR OpenMx plyr qgraph regsem rockchalk sem XML]; }; semPower = derive2 { name="semPower"; version="1.1.0"; sha256="091695q9s5hymnziz9sjbn0magxqb21m9z2yj97w1laaflc3m3z3"; depends=[]; }; semTable = derive2 { name="semTable"; version="1.8"; sha256="0qr420rnz59q8arf6x05iy1zyh7pv31ldi2rsw1j2a00fbpp4ndf"; depends=[kutils lavaan plyr stationery xtable]; }; - semTools = derive2 { name="semTools"; version="0.5-4"; sha256="15kban4ds2mssxqslm126b89p8biya14c9m68sqk61vzvx5dm2vq"; depends=[lavaan]; }; + semTools = derive2 { name="semTools"; version="0.5-5"; sha256="1dpsn43ifvfy5v8w2fqdy54yclmy0d3qlzix67lflr2r7isq7y6x"; depends=[lavaan pbivnorm]; }; semantic_dashboard = derive2 { name="semantic.dashboard"; version="0.2.0"; sha256="0i9l8s19bw5xj4dzq932j0lzldg725zwcxnnda9p8gp0fimkb3d2"; depends=[checkmate glue htmltools shiny shiny_semantic]; }; semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; semdrw = derive2 { name="semdrw"; version="0.1.0"; sha256="16hm1ifgspnxnlf3rfg5ylmql2fq91ig8nc5953ggyhfrjwbqx15"; depends=[dplyr lavaan psych semPlot semTools shiny shinyAce]; }; semds = derive2 { name="semds"; version="0.9-6"; sha256="10kvcmcy6qa2r5sram6azqgzl528rghfxgw2f2bq2fvhhq127dzq"; depends=[minpack_lm pracma]; }; - semiArtificial = derive2 { name="semiArtificial"; version="2.3.1"; sha256="1rjf8wsbwi6kfwsh89kblhl0f3m7rrma7gly7b4xm7bj7jdkljkr"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; }; - seminr = derive2 { name="seminr"; version="2.0.2"; sha256="1pq3sr7rk6x96yfspz5j06v9nmsccgdgbpv8gsyp8qvfckb6cgyk"; depends=[glue lavaan]; }; - semmcmc = derive2 { name="semmcmc"; version="0.0.4"; sha256="161h6rilxkycvnpqa8xrfs6x11nzrdi5fg28sa5h0gc4ibr13p8a"; depends=[MASS msm]; }; + semiArtificial = derive2 { name="semiArtificial"; version="2.4.1"; sha256="0zsn3r5n7n3dsa02i194lr6ail7mizq9xp8x3kc5k17z4ckcfysd"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; }; + seminr = derive2 { name="seminr"; version="2.2.1"; sha256="162x14zvnwbm0gpb71fcxmig1z3qk00gigznz1kzqvp64hz8kb24"; depends=[DiagrammeR DiagrammeRsvg glue knitr lavaan rmarkdown testthat webp]; }; + semmcmc = derive2 { name="semmcmc"; version="0.0.6"; sha256="13asqiw3zazh9k3p39582a0bzm00gmagls2w76kvpygilj4r5391"; depends=[MASS msm]; }; semnar = derive2 { name="semnar"; version="0.7.1"; sha256="0g6l4377i9wdwbcrdhdmsph68bd6qwc5mjlw824mpxn0ggg6vx72"; depends=[jsonlite leaflet lubridate magrittr urlshorteneR]; }; semnova = derive2 { name="semnova"; version="0.1-6"; sha256="1vghf8gy0vahwn3nq752wm0rbj33jdy69yqjzin94sk8xa42d0wi"; depends=[lavaan MASS Matrix]; }; semsfa = derive2 { name="semsfa"; version="1.1"; sha256="1k6i1m4r9y7j85rlrsgfjm8w15ax4xgf70xyvqwsszmf9950ldxx"; depends=[doParallel foreach gamlss iterators mgcv moments np]; }; - semtree = derive2 { name="semtree"; version="0.9.15"; sha256="1lw9dx6q60izjrk3a8dbc030p8daxpsa5gkdafrlrwhy55mga7sb"; depends=[bitops clisymbols cluster crayon digest expm ggplot2 lavaan OpenMx plotrix rpart rpart_plot sandwich sets stringr strucchange testthat tidyr viridis zoo]; }; + semtree = derive2 { name="semtree"; version="0.9.17"; sha256="1xkzvd5z6jsijx77d8fs63x7cdnnb2mzzn39hjl129kiq1xppibs"; depends=[bitops clisymbols cluster crayon digest future_apply ggplot2 lavaan OpenMx plotrix rpart rpart_plot sandwich sets stringr strucchange tidyr zoo]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; semverutils = derive2 { name="semverutils"; version="0.1.0"; sha256="0y3zh8n8bgs3ag8yy9cnp0i0xrn0iqflcbrya70glyb40148w9sw"; depends=[foreach R6]; }; - sen2r = derive2 { name="sen2r"; version="1.4.3"; sha256="00rvs4n2p7vn9nnx7iia90lm8v6wa5i1dsga9q7x45ydxn6b5ndz"; depends=[data_table doParallel foreach geojsonio httr jsonlite raster RcppTOML rgdal sf stars XML]; }; + sen2r = derive2 { name="sen2r"; version="1.5.0"; sha256="1k47hb1rnarnz3sgcn1qb5hm0lfhpaw8q3gg8ll6avw5ilgqv2sj"; depends=[data_table doParallel foreach geojsonio httr jsonlite raster RcppTOML rgdal sf stars XML]; }; sendgridr = derive2 { name="sendgridr"; version="0.2.4"; sha256="1jh114llpqpij75gn5r7ss3hrdgb9a8pggxrd0nm25f1gx4yga3s"; depends=[base64enc clipr clisymbols crayon desc dplyr fs glue httr jsonlite magrittr rlang stringr tibble tidyr usethis]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sensR = derive2 { name="sensR"; version="1.5-2"; sha256="073za0z6dawba2nd45hs20m0143kckxn3iglkyqz9vdfqwyv7wlq"; depends=[MASS multcomp numDeriv]; }; + sense = derive2 { name="sense"; version="1.0.0"; sha256="09idl88n6jlgbn5apgk0vr1bwmqi624ikv1qfx7hvyi79ixg49f4"; depends=[bbotk data_table forcats lubridate Metrics mlr3 mlr3filters mlr3learners mlr3pipelines mlr3tuning mlr3viz paradox purrr readr tictoc visNetwork]; }; sensemakr = derive2 { name="sensemakr"; version="0.1.3"; sha256="1pgzmv72jsl359lni9z0fc7szyy9aiqyi2lwkmvnc8kmqd5dmk1f"; depends=[]; }; sensiPhy = derive2 { name="sensiPhy"; version="0.8.5"; sha256="1kjkdklva5wzmw071gbn1v9g5cf0wzmvwgy5y0dgi530v6byaw8j"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; sensibo_sky = derive2 { name="sensibo.sky"; version="1.0.0"; sha256="0s8gbj7qrcbcnflp7v0s93ykh2xgk7jwpyvzndj1f90hjy20x3bc"; depends=[glue httr jsonlite]; }; - sensitivity = derive2 { name="sensitivity"; version="1.25.0"; sha256="1hs4p4dzfiga197isvr3486pwba9m3yx1f9zh9wwskh6gpczm9yx"; depends=[boot foreach ggplot2 numbers Rcpp RcppArmadillo]; }; + sensitivity = derive2 { name="sensitivity"; version="1.26.1"; sha256="1pdb5x2nbm4z33p91x2b3v2k267sk9qplch1k21xrh8w7krpl9xx"; depends=[boot foreach ggplot2 numbers Rcpp RcppArmadillo]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityCalibration = derive2 { name="sensitivityCalibration"; version="0.0.1"; sha256="1fn07dra7dhpsg6f1yn1ayfpmvwaxma8cps94070nrpfwmdvi04g"; depends=[ggplot2 ggrepel plotly relaimpo splitstackshape stringi]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; @@ -15193,24 +15816,25 @@ in with self; { sensitivitymv = derive2 { name="sensitivitymv"; version="1.4.3"; sha256="1ga8mf92niiv1z3g3kv5ha5xdd1089aaqp19dz68kv8a396vhy1j"; depends=[]; }; sensitivitymw = derive2 { name="sensitivitymw"; version="1.1"; sha256="1bknnfkkqgmchabcjdfikm37sn5k41ar8lpnjw58i8qh7yzq237i"; depends=[]; }; sensmediation = derive2 { name="sensmediation"; version="0.3.0"; sha256="0pmhlc5aqz1vwl4fpn38nkqy63pbq6q62fk9xjja4khrq35zh9yb"; depends=[maxLik mvtnorm]; }; - sensobol = derive2 { name="sensobol"; version="1.0.1"; sha256="0vx5qxiig2i6282bkdsywvx0ba4cryamz18qjg0p2zns0nf5xhvn"; depends=[boot data_table deSolve ggplot2 lhs magrittr matrixStats randtoolbox Rcpp RcppArmadillo Rdpack Rfast rlang scales stringr]; }; + sensobol = derive2 { name="sensobol"; version="1.0.3"; sha256="0m9zdzp5s0a3c2bk91h7iiyhc5imm8hi81sy4kk1ydwa5z5zld49"; depends=[boot data_table deSolve ggplot2 lhs magrittr matrixStats randtoolbox Rcpp RcppArmadillo Rdpack Rfast rlang scales stringr]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; sentencepiece = derive2 { name="sentencepiece"; version="0.1.2"; sha256="062qhvcgrl0r7lxrhjkyrncl8nihf3fkvwjish93shsrgc5596r5"; depends=[Rcpp]; }; sentimentr = derive2 { name="sentimentr"; version="2.7.1"; sha256="13myh7w9pynmgvqspsxpnj8mz8jz8nwkwjyax4hahvwb9707hf2s"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.8.4"; sha256="16j6f8n4lz4v0lhalzslvhvd2a6grj9glxhmnbcyfijwh8259vq6"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; + sentometrics = derive2 { name="sentometrics"; version="1.0.0"; sha256="06qvwfgshr70n1qgf2zqjvycwwrak8d5hfyn3v5k2qzkfaxkihmm"; depends=[caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi]; }; sentryR = derive2 { name="sentryR"; version="1.1.0"; sha256="0kz81dbxg4zyns829cjhjm2g88pxzaaxdk7c8qabvl0zgqys2chy"; depends=[httr jsonlite stringr tibble uuid]; }; separationplot = derive2 { name="separationplot"; version="1.3"; sha256="0ggyr4asp86hvdp4bwdkljz9b2gzdxm2y9nbz2srlgh3m4hlz2cs"; depends=[foreign Hmisc MASS RColorBrewer]; }; - seplyr = derive2 { name="seplyr"; version="1.0.1"; sha256="0r40z0m1ixm1l6w6alhbfzkiyvayrvwwmn0ybcshrn8rqys56q21"; depends=[dplyr rlang tidyr wrapr]; }; + seplyr = derive2 { name="seplyr"; version="1.0.4"; sha256="09lv2jic2dhwl2pra56kf7087inbjg9b5461dyy2a31h5ji68j08"; depends=[dplyr rlang tidyr wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2.1"; sha256="176ggpdcgmpsjixmz0ldknyd0vw120kjyrid3bq2bn4cgkwzb74z"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.2"; sha256="10p8ldj83mvhpcz1yas4xns5qh8zbs533na8nv87phngi8dsb76m"; depends=[survival]; }; - seqHMM = derive2 { name="seqHMM"; version="1.0.14"; sha256="0ybdp5364jddakkd7rawrfk87hn30fgjpsirlz2440w600m69ydr"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; + seqHMM = derive2 { name="seqHMM"; version="1.1.1"; sha256="1qq69nkjkipxjb53farm31f436nwmnqrzdrjd7vibs9in18f1c6b"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; seqICP = derive2 { name="seqICP"; version="1.1"; sha256="1dfhl7g47icjw38p9c0hyvnn3pwzw7pndywk22vgcyfhiz23xjcp"; depends=[dHSIC mgcv]; }; + seqR = derive2 { name="seqR"; version="1.0.0"; sha256="0nb43p6wfix4h5ygz20k63aqwxm6q6l2ab3q932hq2dc4hi476bj"; depends=[Matrix Rcpp RcppParallel rlang slam]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; seqest = derive2 { name="seqest"; version="1.0.1"; sha256="06zk87n26305m0hy6lg7v3bpxmsqvinwkvw3dvmzkqp5jdkhwikb"; depends=[foreach geepack MASS mvtnorm nnet Rcpp RcppArmadillo VGAM]; }; seqgendiff = derive2 { name="seqgendiff"; version="1.2.2"; sha256="0vrmh4h2g4hvx8ix5jyc4bhp8vpr00fcqsfbf9r0808jqnlwgcnr"; depends=[assertthat cate clue irlba matchingR pdist sva]; }; seqhandbook = derive2 { name="seqhandbook"; version="0.1.0"; sha256="0zncpjabazci92wzw126i491669gidkyiw7zjp7iw23m6jaf71l4"; depends=[TraMineR]; }; - seqinr = derive2 { name="seqinr"; version="4.2-5"; sha256="1z1jipgrn9nrnxlx7bcf8c2chwpa3kfva0zgyb12xbr3kisn166y"; depends=[ade4 segmented]; }; + seqinr = derive2 { name="seqinr"; version="4.2-8"; sha256="1xz9spln6s9mcwpgcv1m4jymn4gnl1bb6vh90bphqcn0vvlk8jsq"; depends=[ade4 segmented]; }; seqmagick = derive2 { name="seqmagick"; version="0.1.5"; sha256="0h1vdsx88k3mpajfv0cgswk2s1560zm6y776b4dqrdkvkcgdbb3g"; depends=[Biostrings magrittr]; }; seqminer = derive2 { name="seqminer"; version="8.0"; sha256="00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i"; depends=[]; }; seqmon = derive2 { name="seqmon"; version="2.4"; sha256="1aqrg9aqvsabg5mm9jfj5vaxxaapfs1qw3yyzbx7vsspcgjdhyca"; depends=[]; }; @@ -15218,42 +15842,43 @@ in with self; { sequence = derive2 { name="sequence"; version="2.0"; sha256="0r5h96gcp18lwgrl2pjlr71xqspkf6qmm1m0xjq5vadalfa7y294"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="3.0.0"; sha256="13l16lacdcf7fn96yj3xqxap0l19ma9ppkxxx5qk9f5abbvdk303"; depends=[copynumber iotools pbapply readr seqminer squash]; }; - sequoia = derive2 { name="sequoia"; version="2.3.3"; sha256="1wga610wwgr0sx110bcd5a8l40pa1mv1s56kjy0b0pk04pv6gapb"; depends=[plyr]; }; + sequoia = derive2 { name="sequoia"; version="2.3.5"; sha256="1n0c24g5zl0l63nsaywwjfqsjn0ql2ckd3iqmc381qngijnckc17"; depends=[plyr]; }; sergeant = derive2 { name="sergeant"; version="0.9.0"; sha256="1iyb0191hkkhhsr4507b1c6j7c7z7lz1v0m2y7flc50yfxicb1fb"; depends=[bit64 DBI dbplyr dplyr htmltools httr jsonlite magrittr purrr readr scales tibble]; }; serial = derive2 { name="serial"; version="3.0"; sha256="1y1gj0lcdn5apiv6c6arks6pqhsbvnrfym6n2izjarx2c27ijrjj"; depends=[]; }; - seriation = derive2 { name="seriation"; version="1.2-9"; sha256="1glxn098ar1v96xlwp85kjxzfd1nyfzp2f82x5z3fm87yv57k4lb"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; + seriation = derive2 { name="seriation"; version="1.3.0"; sha256="1vl0zfdvxdccvda8lwkjhg5rivj2q5gjm4qvkqwny6asm06x80ny"; depends=[cluster colorspace gclus MASS qap registry TSP]; }; serieslcb = derive2 { name="serieslcb"; version="0.4.0"; sha256="1ip4k2xzg06hwsni62ai1whs1zzhwlf94507inpfpqz3jmmafrhq"; depends=[gplots shiny]; }; seroincidence = derive2 { name="seroincidence"; version="2.0.0"; sha256="0sam4y7w6prswz0izkm1a9v2k5rv7z22g1ajy15n9xix9aml5ms4"; depends=[]; }; - serp = derive2 { name="serp"; version="0.1.8"; sha256="02lclpb3lp1carzz9y2vm4z19zx3fj7yc3f4ldpdpipx5z4250fl"; depends=[ordinal]; }; + serp = derive2 { name="serp"; version="0.2.1"; sha256="04rcs0p9yig9i0ckxispgdf13x4jabs9fl3kirxkllda73pxa4mm"; depends=[ordinal]; }; serpstatr = derive2 { name="serpstatr"; version="0.1.0"; sha256="1myxw3dh3mkai803dnfdd1zyr2mjzsd2pw00l1fwmmbdplqg9q20"; depends=[httr]; }; - serrsBayes = derive2 { name="serrsBayes"; version="0.4-1"; sha256="0618415n2izdgv85cnmlnpwy0lz7rnimspq8986w5w1ywhw2xpbm"; depends=[Matrix Rcpp RcppEigen truncnorm]; }; + serrsBayes = derive2 { name="serrsBayes"; version="0.5-0"; sha256="1w8fs9k4zhy0hwkm30dvi360n28cl2gn9vdqaak64g0nlvb9jy1w"; depends=[Matrix Rcpp RcppEigen truncnorm]; }; servosphereR = derive2 { name="servosphereR"; version="0.1.1"; sha256="0m1fjd3f1s2ss54xmcrm3p0c33hhi2dj0vim790g4y0mw2aicc8l"; depends=[data_table dplyr magrittr purrr rlang]; }; - servr = derive2 { name="servr"; version="0.22"; sha256="1vnlkbf8s55rfgz7qp2dd84pf9zw94qmdx25rl6i7jybhsxmb71h"; depends=[httpuv jsonlite mime xfun]; }; + servr = derive2 { name="servr"; version="0.23"; sha256="1f1fgfgjgjsbn2krkbyw2qwkm0k4lq9p9jakg9zwyqlgpkdd34j4"; depends=[httpuv jsonlite mime xfun]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; sessioninfo = derive2 { name="sessioninfo"; version="1.1.1"; sha256="0j5f3l58fynxx3v0w62vqpii7miabszgljpja36xx9s8hikh8sqn"; depends=[cli withr]; }; set = derive2 { name="set"; version="1.2"; sha256="0f36dp9k0nxp1amsd7ybwgbv0vxvgd1kns7cbfsbsh0kljxyplzp"; depends=[do]; }; - set6 = derive2 { name="set6"; version="0.2.1"; sha256="05c2s8wj10nv07p9617grdhsf5ijwpv82r0d2f76p0sbcx3d46qm"; depends=[checkmate R6 Rcpp]; }; + set6 = derive2 { name="set6"; version="0.2.3"; sha256="16877rqq4ayr6x95fjl9yagnjsv0x4mxvqw5zgsx8a3azqkplail"; depends=[checkmate R6 Rcpp]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; }; setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; - settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; - sever = derive2 { name="sever"; version="0.0.6"; sha256="0za9xdzmp2hbiq83wp0gjrzb2k180mgmvjzh1jldhrjpz7cvdbnk"; depends=[cli shiny]; }; + settings = derive2 { name="settings"; version="0.2.7"; sha256="1i9ij5k8p2v9gxr48vas8hj337mbyx9c4ywv9bbdwkz6kzah46k5"; depends=[]; }; + sever = derive2 { name="sever"; version="0.0.7"; sha256="10jckf6q31blsl1yhs5f1mx7b8sm8sqb86iakcvaslf651ijx81m"; depends=[cli htmltools shiny]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.9-8"; sha256="096gg2hbynn6mv3w8n69x987fklg5rrgd0d4nbqaw7vhg1jhlmqi"; depends=[classInt DBI magrittr Rcpp units]; }; + sf = derive2 { name="sf"; version="1.0-2"; sha256="0hh54krf4gjwrzxj2r3p5q7amdf8kblv8nm7hmbwmfv1rs30i1gc"; depends=[classInt DBI magrittr Rcpp s2 units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; sfaR = derive2 { name="sfaR"; version="0.1.0"; sha256="1lgazgj6xfg0syspw6wzmd4xyczydhdgghpaf9kgrqvqfkaqcf8p"; depends=[dplyr emdbook fBasics Formula gsl marqLevAlg MASS maxLik moments nleqslv numDeriv primes qrng randtoolbox trustOptim ucminf]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; + sfarrow = derive2 { name="sfarrow"; version="0.4.0"; sha256="0c03dq6m2yc0dfj2kmqlxdxjv94fkhr7v4dlaw1jxha0fpd1p1l6"; depends=[arrow dplyr jsonlite sf]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; sfcr = derive2 { name="sfcr"; version="0.1.1"; sha256="106rw6y8gyknc7jxx10ixwbclzng6isiv74cg1gi64zh2xfbhbzk"; depends=[dplyr expm forcats igraph kableExtra magrittr purrr Rcpp RcppArmadillo Rdpack rlang rootSolve stringr tibble tidyr tidyselect vctrs]; }; sfdct = derive2 { name="sfdct"; version="0.1.0"; sha256="0p3ipp6x8vnsi94078n098yk9wglnawvzh19imcgk2c1l5lazwgf"; depends=[dplyr RTriangle sf sp tibble]; }; sfheaders = derive2 { name="sfheaders"; version="0.4.0"; sha256="0ig02nszrs6fkjkrkqibp23n4a8qr4i09yz7l741yjd0308ddg46"; depends=[geometries Rcpp]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; - sfnetworks = derive2 { name="sfnetworks"; version="0.5.1"; sha256="1r62jmd6gbl60p404d3fdlrz6v7b2gsibqvfiqy3pfkkjn38b4ma"; depends=[crayon dplyr igraph lwgeom rlang sf sfheaders tibble tidygraph units]; }; + sfnetworks = derive2 { name="sfnetworks"; version="0.5.2"; sha256="0kywp90zc9wbqsbhp2nc3a3xhyqvhv0l033i4nnrkjf60v9sqam8"; depends=[crayon dplyr igraph lwgeom rlang sf sfheaders tibble tidygraph units]; }; sfo = derive2 { name="sfo"; version="0.1.1"; sha256="0ja0kyrr6vqwk9fj1hq9bvfkak2vgav0hlqpgn4sa9h9j1s8r4js"; depends=[]; }; - sfsmisc = derive2 { name="sfsmisc"; version="1.1-11"; sha256="1qm39v2a41rgiv1hxwxl06grgbmjgg3r2ch5df3zsf82rs9fv2n7"; depends=[]; }; + sfsmisc = derive2 { name="sfsmisc"; version="1.1-12"; sha256="10h76pgzcxv1y5pkmba9607lvjrsyq62sq63s2n7ry7z5151h4lv"; depends=[]; }; sft = derive2 { name="sft"; version="2.2-1"; sha256="0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33"; depends=[fda SuppDists]; }; - sftrack = derive2 { name="sftrack"; version="0.5.2"; sha256="1mh4m4z18wnhar88f5amkdwvfsbdx1qjyylf9jp4hm371a76sawg"; depends=[sf]; }; + sftrack = derive2 { name="sftrack"; version="0.5.3"; sha256="1dj21n7iqv334va40p4v3rxh87qbpwgq0062f67kpa3jd16xzkmk"; depends=[sf]; }; sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; }; sgat = derive2 { name="sgat"; version="0.9"; sha256="14sniq5yfh7xmbnd8d0ighw97352qjgfdg587a6hxafisx9is61p"; depends=[data_table dplyr plyr qdapRegex RCurl RSelenium stringr]; }; sgd = derive2 { name="sgd"; version="1.1.1"; sha256="055khw3jr7kr8la3jpzq1q25gk0qcclkv7g0q1sylhyqq2qdriwb"; depends=[BH bigmemory ggplot2 MASS Rcpp RcppArmadillo]; }; @@ -15261,20 +15886,20 @@ in with self; { sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; sglOptim = derive2 { name="sglOptim"; version="1.3.8"; sha256="15bkkvgp9v9vsp65wps48g3c2fa0fj1025hbrziywq14j7wayyjr"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.4"; sha256="0sdarn39857405ndmqyka5ksvwczb5ifl5aap96wpm625iz2a1pi"; depends=[igraph Matrix]; }; - sglg = derive2 { name="sglg"; version="0.1.9"; sha256="06509jlskqxk9m64xz65q467pc85wpv3479s17sg2h7yhh71i9yy"; depends=[AdequacyModel Formula ggplot2 gridExtra moments pracma survival]; }; + sglg = derive2 { name="sglg"; version="0.1.10"; sha256="1nrzbnk82hv90ss2xji8nanyrnn1a41kfvmnydyl1i4dra3867bf"; depends=[AdequacyModel Formula ggplot2 gridExtra moments plot3D pracma progress Rcpp survival TeachingSampling]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; sgmcmc = derive2 { name="sgmcmc"; version="0.2.5"; sha256="0lq79c7i6bklh8c63wx3k6h9mk8s1abbr0hc41drcm96bbbg0aal"; depends=[reticulate tensorflow]; }; sgmodel = derive2 { name="sgmodel"; version="0.1.1"; sha256="1i13vp91i8s61ylsyg0iij1sfclwif7v91slr2srl8ddz6lm23nx"; depends=[ggplot2 ramify Rtauchen]; }; sgof = derive2 { name="sgof"; version="2.3.2"; sha256="020kc6h9iw4qhb9pdi7wk8vcy54dp10x0z3nlq3gwwbj1l9izc44"; depends=[poibin]; }; sgpv = derive2 { name="sgpv"; version="1.1.0"; sha256="0w0slnnw239a34c0h7xr76c4m0rfwl0hq61g9n12vzxd6lfh3gqz"; depends=[]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; - sgstar = derive2 { name="sgstar"; version="0.1.1"; sha256="12g50h31mp80d696338m5kfhfgy5i9siavrs8dnxvqha832cynm4"; depends=[dplyr ggplot2 nlme tidyr]; }; + sgstar = derive2 { name="sgstar"; version="0.1.2"; sha256="0b3bw10lf5h4kgg3c0s3lxsafaffhn8gc9kxmg7bg35lbxv0r1vn"; depends=[dplyr ggplot2 tidyr]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; shades = derive2 { name="shades"; version="1.4.0"; sha256="1zg95sjhrfvbdlfc387g9p0vnb8nb6agdk1mb3wq3kwkm2da0bqj"; depends=[]; }; shadow = derive2 { name="shadow"; version="0.7.1"; sha256="055064jwxf9fkvw95w8if5aqcxrgg3b224qs1c81v8m8adr46v0r"; depends=[raster rgeos sp]; }; - shadowtext = derive2 { name="shadowtext"; version="0.0.8"; sha256="16lhhd7q1qz82grkq1q4fn5mkq8nphh4wvva4jijrl605cd6cc7v"; depends=[ggplot2 scales]; }; + shadowtext = derive2 { name="shadowtext"; version="0.0.9"; sha256="1g6mgnfnzf2c17yzqk3zybfc5y62p5ndrbikxb3xcm2hiljiiqna"; depends=[ggplot2 scales]; }; shallot = derive2 { name="shallot"; version="0.4.10"; sha256="05ciafpahcrsh9kwg1yqwbmanvkbv1i1cjjpvq3w4cdqkhn4fam7"; depends=[commonsMath rscala]; }; - shape = derive2 { name="shape"; version="1.4.5"; sha256="17qqhjyfhxv9la07ykaslb50c8g4d0cgfypx4y91h9i2yjw7jjh9"; depends=[]; }; + shape = derive2 { name="shape"; version="1.4.6"; sha256="0yqbrrx2ywmfl99s6d1n6jblc63k1mxbiqyv8y0kq8jws1g3w45r"; depends=[]; }; shapeNA = derive2 { name="shapeNA"; version="0.0.2"; sha256="1ivp8kvnacr2fx3rs7ckzdpinb6bifzzw7riskzj95lygjlkvabw"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; @@ -15286,28 +15911,30 @@ in with self; { sharpPen = derive2 { name="sharpPen"; version="1.7"; sha256="1nhmxfyrzmm6qgwrlfc046lm9n8n5r62ym44956zg2z1m2vhnysf"; depends=[glmnet KernSmooth MASS Matrix np]; }; sharpeRratio = derive2 { name="sharpeRratio"; version="1.4.2"; sha256="1l0ix779kzci647v4irxs0j83zwfchd51k8576ivis7cr5f1a9v6"; depends=[ghyp Rcpp]; }; sharpr2 = derive2 { name="sharpr2"; version="1.1.1.0"; sha256="1r7anfr296l5sbhgry6rb15hlca6mpcm24qssdzz9bckavyfvqgi"; depends=[Matrix mvtnorm]; }; - sharpshootR = derive2 { name="sharpshootR"; version="1.8.1"; sha256="0pii2wcy18mdvbfdhylh9rgzb9vqafxkbs54awv7qs32yg51kw3k"; depends=[ape aqp circular cluster curl digest e1071 Hmisc igraph lattice plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; + sharpshootR = derive2 { name="sharpshootR"; version="1.8.2"; sha256="0dg55zb1j0nv5flfxzs64rkr8x11g0inhygn98d4q7i00cdh9v77"; depends=[ape aqp circular cluster curl digest e1071 Hmisc igraph lattice plyr RColorBrewer reshape2 scales soilDB sp stringi vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; - shattering = derive2 { name="shattering"; version="1.0.4"; sha256="1wafbmmx1xgiqb7zwm67z4868gmsyi1rg1mxlrgszvxalypqb6g7"; depends=[FNN pdist pracma rmarkdown Ryacas slam]; }; - shatteringdt = derive2 { name="shatteringdt"; version="0.1.0"; sha256="06f7mgfr0yy1k2hk0qb8dv7af8w6m6jg95k75grmy2qakly34xvp"; depends=[rpart testthat tree]; }; - shazam = derive2 { name="shazam"; version="1.0.2"; sha256="0v4a2i4fgdj6r2hlrnnn53xm22w9py4psf75i8iyx6nlbbbfbn4q"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales seqinr stringi tidyr tidyselect]; }; + shattering = derive2 { name="shattering"; version="1.0.7"; sha256="0dmb57pdgzwm001gfm1zm8ba7x71bp2vjk4ml0cy4r05hpdswfh3"; depends=[e1071 FNN NMF pdist pracma rmarkdown Ryacas slam]; }; + shazam = derive2 { name="shazam"; version="1.1.0"; sha256="1jakx3fwhlswwbmkac25nmcrk70cyc2iypmmxlgd3wxaqbnrd97z"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress rlang scales seqinr stringi tidyr tidyselect]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.5"; sha256="18y2qzqx8hd6yph1wnsq4ygm16pcdszynh174xsrxrhvx2h9mi4x"; depends=[]; }; shinipsum = derive2 { name="shinipsum"; version="0.1.0"; sha256="0d94189hmg0bl8x0s8fpba5gcvb95sr9k9lbp3kk8482fc5h147n"; depends=[attempt DT dygraphs ggplot2 magrittr plotly]; }; - shiny = derive2 { name="shiny"; version="1.6.0"; sha256="16dvhkbl29cqc2dz4sp1mjaxd3gis3vcixqxrjysl46ncxnxgmwb"; depends=[bslib cachem commonmark crayon digest ellipsis fastmap glue htmltools httpuv jsonlite later lifecycle mime promises R6 rlang sourcetools withr xtable]; }; + shiny = derive2 { name="shiny"; version="1.7.0"; sha256="19jb0q5qk6p03qnc0bqc6w61hib4z4qcd777086l5siz5qvf51qw"; depends=[bslib cachem commonmark crayon ellipsis fastmap fontawesome glue htmltools httpuv jsonlite later lifecycle mime promises R6 rlang sourcetools withr xtable]; }; shiny_i18n = derive2 { name="shiny.i18n"; version="0.2.0"; sha256="0gwdrbdsibffq314pzws2gr74fp701kb3rwdiwxbzzg0pgqpiwp3"; depends=[glue jsonlite R6 rstudioapi shiny stringr yaml]; }; shiny_info = derive2 { name="shiny.info"; version="0.2.0"; sha256="162wvb02z5h1y7xgsyl6wv88zlfmbm1jlnz48f56fyybs54baw41"; depends=[git2r glue shiny]; }; - shiny_pwa = derive2 { name="shiny.pwa"; version="0.2.0"; sha256="01nsvz40zazhycpj9kg0pvxink4p0j8iqcw1dzz8zbj54lw3sjk8"; depends=[htmltools readr shiny urltools]; }; + shiny_pwa = derive2 { name="shiny.pwa"; version="0.2.1"; sha256="120wqqy7fh7nm2bib3dq02a92jb3lykkl7qayiw6bnax8sdr18yw"; depends=[htmltools readr shiny urltools]; }; + shiny_react = derive2 { name="shiny.react"; version="0.2.3"; sha256="19k1rvq47s56cipxqbalgzmhwdxw3ic5bd9qqnvsw75ynbhpa959"; depends=[glue htmltools jsonlite logger rlang shiny]; }; + shiny_reglog = derive2 { name="shiny.reglog"; version="0.2.0.2"; sha256="09zj7qivfb34bqghj3qa0ksw3k8bpd01bzs99rvds746gc08njj4"; depends=[DBI dbplyr dplyr googlesheets4 lubridate R6 RSQLite scrypt shiny]; }; shiny_router = derive2 { name="shiny.router"; version="0.2.2"; sha256="1jxk1hxi42kyi5dahszhl9nzppa99svk1vhwf2d15apfrg2d6ivc"; depends=[htmltools magrittr shiny]; }; shiny_semantic = derive2 { name="shiny.semantic"; version="0.4.2"; sha256="0ndjp8c3c8kci8rzhj4bg1zpgwzcilgbjplx0sr2hii87lpi0v2j"; depends=[glue htmltools htmlwidgets jsonlite magrittr purrr R6 shiny]; }; shiny_worker = derive2 { name="shiny.worker"; version="0.0.1"; sha256="1l30dx46s3q1x9nd42r6dracd3lqkjk80r9jyjqy8lmdsq48300i"; depends=[future R6 shiny]; }; shinyAce = derive2 { name="shinyAce"; version="0.4.1"; sha256="1m33dfm2kjirvgix7ybv1kbzgjkicdpv411g9c0q3fw6rnyhfxxn"; depends=[jsonlite shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; shinyChakraSlider = derive2 { name="shinyChakraSlider"; version="0.1.0"; sha256="1vsbw9dm8ai2w6mfdaksxh13ryh2awajqgkcwcxb99l47h17rvpy"; depends=[htmltools reactR shiny]; }; + shinyChakraUI = derive2 { name="shinyChakraUI"; version="1.0.0"; sha256="03m96khn55bif1x1qx0frkn8j87pap201mjl0zpsrxnpky2q4m6a"; depends=[formatR htmltools jsonlite reactR rlang shiny stringr]; }; shinyCyJS = derive2 { name="shinyCyJS"; version="0.0.11"; sha256="1wvrv5hdr74d2a68iwy76ffawmy4mpw0swrngw41zqpjd6hjiyxd"; depends=[htmlwidgets]; }; shinyDND = derive2 { name="shinyDND"; version="0.1.0"; sha256="0nkvz4hmjzmxlzj4vkjrdy8xlbxapg1amk180irgvwicqldi4jpm"; depends=[htmltools shiny]; }; - shinyEffects = derive2 { name="shinyEffects"; version="0.1.0"; sha256="03fm2i1ydlp90w299nvz7dqs9724g0m2f0bc44ni8m2gz9cfpccs"; depends=[htmltools shiny shinydashboard]; }; - shinyFeedback = derive2 { name="shinyFeedback"; version="0.3.0"; sha256="0cqp3a2nngbvrr04ajavnmpbr366zb11iwni4fs8v6ymx8v1wmd7"; depends=[htmltools jsonlite shiny]; }; + shinyEffects = derive2 { name="shinyEffects"; version="0.2.0"; sha256="1ajar09hmrk7vcw89wkgvkz2yl0cfnkz915b57w1lmbvpxzgsq3i"; depends=[htmltools shiny]; }; + shinyFeedback = derive2 { name="shinyFeedback"; version="0.4.0"; sha256="1xfznq2d4wkk0b0y4k25rwg4d3bhn3gxlkf3chfqk44f4rgril11"; depends=[fontawesome htmltools jsonlite shiny]; }; shinyFiles = derive2 { name="shinyFiles"; version="0.9.0"; sha256="0rsijlx16vd74r7bd8s9zipy71kgpw19v9s85kxj5bmwc6njmbai"; depends=[fs htmltools jsonlite shiny tibble]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.2.0"; sha256="1n7c7dvvb9kqay2phcf0bkwi990x1cjl7js6pq05xx7rli5bc5h4"; depends=[dplyr heatmaply htmltools plotly readxl rmarkdown shiny xtable]; }; shinyIRT = derive2 { name="shinyIRT"; version="0.1"; sha256="01x7nhjs1dx2ldwznhbavc5vzqhgkn73xg395vlf2hgzbxa2ydvj"; depends=[irtoys magrittr mirt psych readxl shiny shinycssloaders shinydashboard]; }; @@ -15315,9 +15942,9 @@ in with self; { shinyKnobs = derive2 { name="shinyKnobs"; version="0.1.3"; sha256="1rxlvq4vr87krf7d6mpx0y53hyz8q1jnx6nv7mlhc1ck13q6fgac"; depends=[htmltools shiny]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.2"; sha256="1sjcll10ciq6pj9h8c6ybjqp8763wc423hddlalcblxxpajf6avz"; depends=[shiny]; }; shinyML = derive2 { name="shinyML"; version="1.0.1"; sha256="086iavycv1gd6scfsixf7cmw0s5a4dc6x5cylfasxrzgiixd76c9"; depends=[argonDash argonR data_table dplyr DT dygraphs ggplot2 h2o lubridate plotly shiny shinycssloaders shinyjs shinyWidgets sparklyr tidyr]; }; - shinyMatrix = derive2 { name="shinyMatrix"; version="0.4.0"; sha256="1fyrh25d8x61dkgbxlgm70nlr77far34kf8af3phqnhmdxjjrpdj"; depends=[jsonlite shiny]; }; + shinyMatrix = derive2 { name="shinyMatrix"; version="0.6.0"; sha256="17v7gg5bli6x3w063id804859m6g07i9ksbm2jyb65489pjgpadk"; depends=[jsonlite shiny]; }; shinyMergely = derive2 { name="shinyMergely"; version="0.1.0"; sha256="04bzrg4n0s3izm3aa2jb141ikvf7gn3qmbjajqcms1i9zyw12y4s"; depends=[shiny]; }; - shinyMobile = derive2 { name="shinyMobile"; version="0.8.0"; sha256="0vsgw3pr5q2xckkhwnxj8g246ha11qkw3v422p153q3gzs8yqwpz"; depends=[htmltools jsonlite magrittr shiny]; }; + shinyMobile = derive2 { name="shinyMobile"; version="0.9.1"; sha256="1v3qs6s3k7s1rnliv06ljx06cgkw154xbl0c1aiv9jjqq16rxh01"; depends=[htmltools httr jsonlite magrittr shiny]; }; shinyMolBio = derive2 { name="shinyMolBio"; version="0.2"; sha256="09lq5pvis450il1agcq5n9cilnq84rfv08w2dz1d0bbq1qgrgnvg"; depends=[checkmate dplyr plotly purrr RColorBrewer RDML shiny stringr whisker]; }; shinyMonacoEditor = derive2 { name="shinyMonacoEditor"; version="1.1.0"; sha256="12inzz9vrxi1465l82fafjva198qxyzwailx1s0fm58cqzhnqxr6"; depends=[shiny]; }; shinyNotes = derive2 { name="shinyNotes"; version="0.0.1"; sha256="1l0nw6xac410109jrr88a62a5fhv6h6xaql19bp0h8qxyc2fppjh"; depends=[DBI dbplyr dplyr magrittr RSQLite shiny shinyjs shinyWidgets stringr]; }; @@ -15328,32 +15955,35 @@ in with self; { shinySearchbar = derive2 { name="shinySearchbar"; version="1.0.0"; sha256="1v80380vym31aw0i1ghwlbdi2xkf3n59w2as62ywqi79025x3w6y"; depends=[jsonlite shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="1.0.1"; sha256="1d830wf7d5ki7frbr1vgy9d0vllyfcylq7pfkspjkz64b2xfhah3"; depends=[htmltools shiny]; }; + shinyToastify = derive2 { name="shinyToastify"; version="2.0.0"; sha256="0ipqwgl89pjiycwg78p0db45lbzry989kn6aqjsf79lpvghnk5qs"; depends=[fontawesome htmltools reactR shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.7"; sha256="0jfx2capckv7hf2yx3fn8i4rcmhi222ah91jnmhg497x8wgz31s3"; depends=[htmlwidgets jsonlite promises shiny stringr]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.6.0"; sha256="140g5vz1hsfqldy1f7nwnnqk759m07z92fmlhl5w2va6niv4hjkn"; depends=[bslib htmltools jsonlite sass shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.6.2"; sha256="097dbzdyw85r7za8hyp9210k9zikxx56y15jb2m7bh5ryl1xj49d"; depends=[bslib htmltools jsonlite sass shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="2.0.0"; sha256="0b392nb6vknbc88dqbkymxs7gcjd5cm2312dw7jwvmmwh8949wm7"; depends=[htmltools shiny uuid]; }; shinyanimate = derive2 { name="shinyanimate"; version="0.3.0"; sha256="0vshid5mfq006cprjj61d0g7ajyc3plc66x55c5jjmijwbp6pw7a"; depends=[shiny]; }; + shinyauthr = derive2 { name="shinyauthr"; version="1.0.0"; sha256="0apaqjkxpr96kx9indl0pifk5y75gdx5npfcvxfg5k2crpx9vmxk"; depends=[dplyr glue rlang shiny shinyjs sodium]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; shinybrms = derive2 { name="shinybrms"; version="1.5.1"; sha256="0vqgfgf0r8w2mrzf5m7a0gk3c214gvcfq6r819vwlkl0n3pdz69d"; depends=[brms rstan shiny]; }; shinybusy = derive2 { name="shinybusy"; version="0.2.2"; sha256="06vfkv382xcpjh30i7d4ym4vyravadp5vjsvrnw4npy0302pdmzl"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="1.0.0"; sha256="0r3xm273lhdhzbs2mkgw1m2kwb7z1dh1pzya8yxy5vacda1l2ikl"; depends=[digest glue shiny]; }; shinycustomloader = derive2 { name="shinycustomloader"; version="0.9.0"; sha256="1klx71vr26g0gjf6hbiia1qidqii5d467i1sdjvlrg1hxdcggqff"; depends=[glue shiny]; }; shinydashboard = derive2 { name="shinydashboard"; version="0.7.1"; sha256="0khac8b27q3swdw07kl609hm0fjfjsjv591b388q99mqqr2rk92i"; depends=[htmltools promises shiny]; }; - shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="2.0.1"; sha256="1kbqrsds7spm702zsdz4975227gf6yzqm6k7xhjqx9sin48ba9av"; depends=[fresh htmltools lifecycle shiny shinydashboard waiter]; }; + shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="2.0.3"; sha256="10sdb1vddx2ij867pqijr63l4233hw1vnn7mzbs0z23g77x8ra29"; depends=[fresh htmltools lifecycle shiny shinydashboard waiter]; }; shinydisconnect = derive2 { name="shinydisconnect"; version="0.1.0"; sha256="14m83y1iv7qvs1hilc0d18q46qnsciflypgm4dsj7vlvh7ilpdvm"; depends=[checkmate glue htmltools shiny]; }; shinydlplot = derive2 { name="shinydlplot"; version="0.1.3"; sha256="1mvhx8f5800d33vl9kgs5mib003aqshb8vgfy9h4qlgxyx35zssk"; depends=[htmltools htmlwidgets plotly shiny shinyBS shinyjs]; }; shinydrive = derive2 { name="shinydrive"; version="0.1.1"; sha256="10g96pvq04sddygdj9pa9hdh1ng71pinlqpkf5r77n70mv8wqqs2"; depends=[DT htmltools knitr R_utils shiny yaml]; }; - shinyfilter = derive2 { name="shinyfilter"; version="0.1.0"; sha256="0gsyfx13lc6a27jwxq3fkvl5szla4hs1rwjiwj13mz0rcc6ly836"; depends=[reactable shiny shinyBS shinyjs stringr]; }; + shinyfilter = derive2 { name="shinyfilter"; version="0.1.1"; sha256="00n1l2jzzviz0f2gialj4zc6xfymzqi99raqhmlm0x9fbj1syfga"; depends=[reactable shiny shinyBS shinyjs stringr]; }; shinyfullscreen = derive2 { name="shinyfullscreen"; version="1.1.0"; sha256="0wx3jhma27701k4cmmls46rfvnix5zylxf09wdn7h6v3zdwvicq8"; depends=[jsonlite shiny]; }; - shinyglide = derive2 { name="shinyglide"; version="0.1.2"; sha256="0i98k3gl83kfzp3vs1his05idhwj1n0bw98ik7d62cgn4rqi6ar4"; depends=[htmltools shiny]; }; + shinyglide = derive2 { name="shinyglide"; version="0.1.3"; sha256="095p5rkx1ms3qdcrrnqkdfz5nylj19r4b5rv9jpkf2a1clhwfc0q"; depends=[htmltools shiny]; }; shinyhelper = derive2 { name="shinyhelper"; version="0.3.2"; sha256="1c4hvf19j3yyh8r12nx85ldkxs89g98q74csnqs5ml5l79a65vgp"; depends=[markdown shiny]; }; shinyhttr = derive2 { name="shinyhttr"; version="1.1.0"; sha256="1snrl7bg1bc5jxqs1c5a2ir6qnf1nq576aigk19k0ms4gb9hh66m"; depends=[httr shinyWidgets]; }; shinyjqui = derive2 { name="shinyjqui"; version="0.4.0"; sha256="0ins0pmfis34jr0rimsp1k1aw856r3xjdnsvv8lkwqhvp58nzqah"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="2.0.0"; sha256="1zzq356dvd8ciajy6r5n4ybgx9xk7ydwv25j86xlcsqznkxdkkf2"; depends=[digest htmltools jsonlite shiny]; }; shinyloadtest = derive2 { name="shinyloadtest"; version="1.1.0"; sha256="0684p9anbc3qdn4rqkxp33nm0d04zb264b3blwa23pa5akis2klq"; depends=[curl dplyr ggplot2 httpuv jsonlite magrittr R6 rlang scales stringr svglite vroom websocket xml2]; }; shinylogs = derive2 { name="shinylogs"; version="0.1.7"; sha256="1b4p0g1vf9wn643rybf382mw6mrrl49qsykh7npa3agcarwznmgr"; depends=[anytime bit64 data_table DBI digest htmltools jsonlite nanotime RSQLite shiny]; }; - shinymanager = derive2 { name="shinymanager"; version="1.0.300"; sha256="1zv8rrplp3cknyk51m5cfmkr992k9cbjh89pmrbb8c24izqilq2a"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite scrypt shiny]; }; + shinymanager = derive2 { name="shinymanager"; version="1.0.400"; sha256="1np2yp5pn8g9i4jhysfgprmdn13cpw4vaaagrd72rnk2r4hpmyx4"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite scrypt shiny]; }; shinymaterial = derive2 { name="shinymaterial"; version="1.2.0"; sha256="0nqakim0cx722sydbv12kgva1nis7h2i0lrvi9c0h54733x7lbza"; depends=[jsonlite sass shiny]; }; + shinymeta = derive2 { name="shinymeta"; version="0.2.0.2"; sha256="1wdfkkks8j510hdhv1h1j3cc8gb79l6z5jnchq62xx1dja12krkp"; depends=[callr fastmap fs htmltools rlang shiny sourcetools styler]; }; shinyobjects = derive2 { name="shinyobjects"; version="0.2.0"; sha256="0fg5gyssia2fqar635vrqgfwpfrk4pqachsgg10y13ljp09lcdm3"; depends=[dplyr glue knitr magrittr pander purrr readr rlang rstudioapi shiny stringr styler tibble tidyr]; }; shinypanel = derive2 { name="shinypanel"; version="0.1.4"; sha256="0hdfpjfhyqj7ym3bwg5xmhnawl98q7mfl2wj950ysajqi88l91pr"; depends=[htmltools jsonlite shiny shinyBS shinyjs]; }; shinypanels = derive2 { name="shinypanels"; version="0.5.0"; sha256="1rslz9wl3gx11dm6il77j4k5swxvcfy5mf0zffbs4zk8xjgpzzj6"; depends=[glue htmltools shiny shinyjs]; }; @@ -15364,66 +15994,68 @@ in with self; { shinyscreenshot = derive2 { name="shinyscreenshot"; version="0.1.0"; sha256="0s0rq6v6dkh6n5dvjzayjmh9jzjndf4d3zixaya9skv22z5gcj0y"; depends=[jsonlite shiny uuid]; }; shinyservicebot = derive2 { name="shinyservicebot"; version="0.1.0"; sha256="18xbggiai6ssyl3q0nqhnszxb7zlbffaw0iy3r7vbzswzqx522la"; depends=[digest htmltools htmlwidgets shiny]; }; shinystan = derive2 { name="shinystan"; version="2.5.0"; sha256="18alf5kiqw7y2l6m5nxxizwc2znsf9frxfsqhvgcad8hld9cbya5"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; - shinysurveys = derive2 { name="shinysurveys"; version="0.1.2"; sha256="1ijzgi81637kprcj1vbmyx00621aj3h4f9wzjd4cg9wpln1yr2yh"; depends=[sass shiny shinyjs]; }; - shinytest = derive2 { name="shinytest"; version="1.5.0"; sha256="179x3d4vnpgv78a4g0g813msmwjy952jn6abzb8fk199h8sr3yjc"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rlang rstudioapi shiny testthat webdriver withr]; }; + shinysurveys = derive2 { name="shinysurveys"; version="0.2.0"; sha256="01bj0g8r71jng03psw9dcjann78divy2xr5yn6y1pa82d96s46b5"; depends=[htmltools jsonlite sass shiny]; }; + shinytest = derive2 { name="shinytest"; version="1.5.1"; sha256="0pjcdkyv1f94fxzpbc9m02kdv8v6jh6dmxsc1kmr22qcj1cbql8s"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rlang rstudioapi shiny testthat webdriver withr]; }; shinythemes = derive2 { name="shinythemes"; version="1.2.0"; sha256="0qr9bfxw8afxns44i2j4msignf6g5qb2nzpay2lpv343rrlqbmip"; depends=[shiny]; }; + shinytitle = derive2 { name="shinytitle"; version="0.1.0"; sha256="1k05s2fmqvz3drnqkxcpxvvmn0sisdqivg7i4x5c6649b97rsbsx"; depends=[shiny]; }; shinytoastr = derive2 { name="shinytoastr"; version="2.1.1"; sha256="01j2z4gf1wxblrjayykwxdr2s8394i7k930x8g4hmrj7c9pv264n"; depends=[shiny]; }; + shinyvalidate = derive2 { name="shinyvalidate"; version="0.1.1"; sha256="04sl1z8i3d2pndxzylc80m435jwjik2yl5g82gaylhz7kj3fqxn4"; depends=[glue htmltools rlang shiny]; }; shinyypr = derive2 { name="shinyypr"; version="0.0.2"; sha256="1k6jsw6gnpwk90hkpa9grki0b68cab57vbd0h6ldjqr11giwcz8z"; depends=[bsplus chk dplyr DT ggplot2 lifecycle magrittr purrr readr shiny shinyjs waiter ypr]; }; - shipunov = derive2 { name="shipunov"; version="1.14"; sha256="0dpk71nz6qhg9khyvcwppc6r71az4wbnm349735990ql8isyr3vy"; depends=[PBSmapping]; }; + shipunov = derive2 { name="shipunov"; version="1.16"; sha256="15960ngphpnljp8nvxcwrvfibs5pj7yygxbd5zlj9nkyaifl8ngs"; depends=[PBSmapping]; }; shock = derive2 { name="shock"; version="1.0"; sha256="11m52al591xjznl62q1waxsg5m1a1afmd0yqcc5zsjlrplykg4lp"; depends=[capushe GGMselect glasso igraph mvtnorm]; }; shopifyr = derive2 { name="shopifyr"; version="1.0.0"; sha256="05hih1v5vvr7vmwarizsdx8517g74s96fdsz3klcz3g12idx1nqn"; depends=[curl jsonlite R6]; }; shortcuts = derive2 { name="shortcuts"; version="1.4.0"; sha256="0y77napfz1v3s667cmyn8357xg5lncbw1hc3hm5kra6nalhq1jps"; depends=[rstudioapi]; }; - shorts = derive2 { name="shorts"; version="1.1.4"; sha256="17wb6awfcvfx76cbrj67v7lklkf1dbwivy55cl83vy6xnbxiw4j1"; depends=[ggplot2 LambertW nlme tidyr]; }; + shorts = derive2 { name="shorts"; version="1.1.6"; sha256="1krjyi9xd7gys5259kf3q2paqwvyhqzici0qbi98754vlbnq53sq"; depends=[ggplot2 LambertW nlme tidyr]; }; shotGroups = derive2 { name="shotGroups"; version="0.8.1"; sha256="17lmdyimz4wsv284520qwb3f2ah7lg2w22rqswkqg0c46sy46gzm"; depends=[boot coin CompQuadForm KernSmooth robustbase]; }; showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; - showtext = derive2 { name="showtext"; version="0.9-2"; sha256="0y5mw6ffk92r7b22irrfhdmj4hxfl0d1wjxj14hznbapc4qm6f0z"; depends=[showtextdb sysfonts]; }; + showtext = derive2 { name="showtext"; version="0.9-4"; sha256="1gvj32wrs5q31bmg5dy6n85d0igm3jhkldhdv8kscw0pfrk89y36"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="3.0"; sha256="0hlnc3fhgrdkd46n7hb6id0gg1v0bf8s4679nrr7rchyp455szq2"; depends=[sysfonts]; }; shp2graph = derive2 { name="shp2graph"; version="0-5"; sha256="1l9mg98hkb0bvr5dzd2p26g8mw5hqjxrym2gmbm10kyapvccfk56"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; - shrinkTVP = derive2 { name="shrinkTVP"; version="2.0.1"; sha256="114b59lgn048sg5zs1shwgzh7q55dcgnhs3y1cd1wl77r3kpy3vs"; depends=[coda GIGrvg Rcpp RcppArmadillo RcppProgress stochvol zoo]; }; + shrinkDSM = derive2 { name="shrinkDSM"; version="0.1.0"; sha256="01yvs1shsp7npfm9w1caprb1x8w42zlzswc2fk9y6q340i51kfzm"; depends=[coda Rcpp RcppArmadillo RcppProgress shrinkTVP stochvol]; }; + shrinkTVP = derive2 { name="shrinkTVP"; version="2.0.2"; sha256="0bzjr1mgz75k81ni149wg2mcrdvig9h4mcm3n2f7l98c3rizvk24"; depends=[coda GIGrvg Rcpp RcppArmadillo RcppProgress stochvol zoo]; }; shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; shuffleCI = derive2 { name="shuffleCI"; version="0.1.0"; sha256="1n9k28m1fcnw1my9a7v0gy9waygd48lab45vj9k2wwijbc325zai"; depends=[plotrix]; }; shutterplot = derive2 { name="shutterplot"; version="0.1.0"; sha256="129jv20m0dinb07lwiz9fxv4z7sxshcmjab2g0p5vrv8jlp9a0yv"; depends=[]; }; shutterstock = derive2 { name="shutterstock"; version="0.1.0"; sha256="1vqbrjbwl2gdcf607f51cdzkjbkmk11n08mzx01j7bwcd278ny8r"; depends=[httr jsonlite]; }; siar = derive2 { name="siar"; version="4.2"; sha256="1c4z72jr81dzkp9xqyrrkwjsalvvksl67pnbaadkc52v84fhzx3r"; depends=[bayesm coda hdrcde MASS mnormt spatstat]; }; - sicegar = derive2 { name="sicegar"; version="0.2.3"; sha256="0q0sp3aqvd4jh8ncfnls194iqikyxyk28zsyq65jkqd8z26s2dq4"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; + sicegar = derive2 { name="sicegar"; version="0.2.4"; sha256="14xv3rir65fmrx89gjxskk32ldp5zz8m8jv5ybgh5jrwm3x1k0fb"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; siconfir = derive2 { name="siconfir"; version="1.0.5"; sha256="0xmn8rjlfqjr73qgdm5zih6hf52f5qy4n9zgqdmfmkv73a2pnam1"; depends=[dplyr httr magrittr purrr tibble tidyr]; }; + siconvr = derive2 { name="siconvr"; version="0.0.1"; sha256="178bqjdx96lk8npa26w29aanal7g6x22b6p1p8gsbyi6h8acgkh0"; depends=[cli data_table dplyr httr magrittr tibble]; }; sideChannelAttack = derive2 { name="sideChannelAttack"; version="1.0-6"; sha256="1xcsy1h8gc8a4f9nzs7zv8x6v55g1pg8vy1kg64iqxm0gnz2f20l"; depends=[ade4 corpcor infotheo MASS mmap]; }; - sidier = derive2 { name="sidier"; version="4.0.3"; sha256="0pfzx0a5f597iqigq9xidm9b9xv18zaiqa35yp4xlk1y7gv0nj6c"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; - sidrar = derive2 { name="sidrar"; version="0.2.5"; sha256="04i061kfzk2qpdz8z7igj0i53387rj3xv6q7xzdyginkn67mrj5m"; depends=[magrittr RCurl rjson rvest stringr xml2]; }; + sidier = derive2 { name="sidier"; version="4.1.0"; sha256="0zayhvhaq0q00rpgy0z01rhf3lcc3791klc8b30pdj627cl9xj01"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; + sidrar = derive2 { name="sidrar"; version="0.2.6"; sha256="069msxwgksvnwf67rb0rsbmfiv2b6xx8ds0fb2zmn2z19bi0pk0f"; depends=[magrittr RCurl rjson rvest stringr xml2]; }; siebanxicor = derive2 { name="siebanxicor"; version="1.0.0"; sha256="0bnpqqhqvqq9kxvzljzp4d5aw9drh78cwyxyqzdvshijl7mmqjwc"; depends=[httr jsonlite]; }; sievePH = derive2 { name="sievePH"; version="1.0.1"; sha256="1hdccfq39sw3jsakv8lrnjp8mmc431l6ka1g9r53ihrz18s6c39v"; depends=[survival]; }; sievetest = derive2 { name="sievetest"; version="1.2.3"; sha256="17qrm7axvlr2yzp8brbibp26f8qdpqm85hc2kjzxm5zqwfvd6dfs"; depends=[]; }; + sift = derive2 { name="sift"; version="0.1.0"; sha256="030vv2rha5d20045bwsp6ihdcgiw9glnchyahpzwym3m6fnkg0y5"; depends=[cpp11 dplyr glue pastecs purrr rlang tibble tidyr tidyselect]; }; sig = derive2 { name="sig"; version="0.0-5"; sha256="084wwpj5mnmq4k98ijbv23z80sj4axadc7c6hn3917dazsaa6ngn"; depends=[]; }; sigInt = derive2 { name="sigInt"; version="0.2.0"; sha256="1y3qbfsynssam05q4947zqd0dkrpcnq5pla409i3xy511wv9702d"; depends=[Formula MASS maxLik pbivnorm randomForest stringr xtable]; }; sigQC = derive2 { name="sigQC"; version="0.1.22"; sha256="17b16mjadmsbqbai90bvryydkfy9k5ww9i65a5ahy3bfjch851f2"; depends=[biclust circlize class cluster ComplexHeatmap fmsb gplots gridGraphics GSVA KernSmooth lattice MASS mclust moments nnet RankProd]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigmaNet = derive2 { name="sigmaNet"; version="1.1.0"; sha256="1i0xikwad9kiyrqxi1klkc4h4hyqfkxr388sw4mrx9pswfpbv3xr"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; }; sigmajs = derive2 { name="sigmajs"; version="0.1.5"; sha256="1d26llpgnj687b8rwgbyhw88zakp334n4a9gabf72qwrg4awm1v5"; depends=[crosstalk dplyr htmltools htmlwidgets igraph jsonlite magrittr purrr scales shiny]; }; - sigminer = derive2 { name="sigminer"; version="2.0.0"; sha256="0f58rryqcaqj298pjl0hzka8r35jd7d69lmjqjsr5xahnfaxk6pp"; depends=[cli cowplot data_table dplyr furrr future ggplot2 ggpubr maftools magrittr NMF purrr Rcpp rlang tidyr]; }; + sigminer = derive2 { name="sigminer"; version="2.1.0"; sha256="16vd0ian51ny0yaa6v36klalr5grva368g26cn4y8ddicgrj2rhv"; depends=[cli cowplot data_table dplyr furrr future ggplot2 ggpubr maftools magrittr NMF purrr Rcpp rlang tidyr]; }; sigmoid = derive2 { name="sigmoid"; version="0.3.0"; sha256="1sa6nmip3fizdk3r47pvx0h3qldn267arpmid0wa1pb7k5j2g682"; depends=[]; }; - signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; + signal = derive2 { name="signal"; version="0.7-7"; sha256="0qaf39vfmhn3d0bdjqd805ayfkaj48dkmf5dqd47bpk7dp21b837"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.5"; sha256="1d4v6cbvcbi8pb5zmn58s01h3jb0kv7yr7qvcnx4p2v82knvhik7"; depends=[Rcpp seqinr shiny]; }; + signed_backbones = derive2 { name="signed.backbones"; version="0.91.5"; sha256="0xk8sncblzihqzqfpaq7158slvrb6ww3dc4v5di1m2bqwhykncwi"; depends=[reshape2]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; signnet = derive2 { name="signnet"; version="0.7.1"; sha256="06mzscjaay0wib8mmnbcacj8zy84nx9p00i8gcpr4nklxfarib3w"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; signs = derive2 { name="signs"; version="0.1.2"; sha256="0dzf5pydvs93rvj6idw9l2asv1bxwz20df7qis2db84hfww2kc6m"; depends=[rlang scales]; }; - sigr = derive2 { name="sigr"; version="1.1.3"; sha256="19hcxk6iksfjyc4qch4sw0rgn54salirw7a0bap9c53nxzrj8bl4"; depends=[wrapr]; }; + sigr = derive2 { name="sigr"; version="1.1.4"; sha256="1gx1dmdi8wjqlhp7a9cp915z0n5hl9xsv2hwzdmk0ijbjgipn7fh"; depends=[wrapr]; }; siland = derive2 { name="siland"; version="2.0.5"; sha256="1896zlfzps35mvhzbd4invpdp39cxhs13lklx56k35l4v2zvh24g"; depends=[fasterize ggforce ggplot2 lme4 raster reshape2 sf sp]; }; silicate = derive2 { name="silicate"; version="0.7.0"; sha256="1x8l6wvymx3scwzym9h6b5wgprjinzp6m2cs6r7xn9aqcr39499a"; depends=[crsmeta decido dplyr gibble gridBase magrittr purrr rlang tibble unjoin]; }; sim1000G = derive2 { name="sim1000G"; version="1.40"; sha256="1avq6xfc34izavvp9vb5ccc2b9nc4m7cwr06ygnsmpgwi5nswbb8"; depends=[hapsim MASS readr stringr]; }; sim2Dpredictr = derive2 { name="sim2Dpredictr"; version="0.1.0"; sha256="0q1l75h1dcxnd60lcmf4sny1ywidfmm0yv9ylkb3yc13v469167i"; depends=[car dplyr ggplot2 magrittr MASS matrixcalc Rdpack spam tibble tidyverse]; }; simEd = derive2 { name="simEd"; version="2.0.0"; sha256="0rsagk77qgxfjjkqrg2kv88cg9z3gnjff7k1558psvbvc50d3cmg"; depends=[rstream shape]; }; simExam = derive2 { name="simExam"; version="1.0.0"; sha256="10p3y67cli5is2gj23cjy8y7zpbnn2jbxmfiq01ls0hc1jind82w"; depends=[Matrix msm]; }; - simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; simIReff = derive2 { name="simIReff"; version="1.0"; sha256="0yi43splda8chnh4bq5x6chbrl5c0y9sv1k2m31763da0czayall"; depends=[bde extraDistr ks MASS np rvinecopulib truncnorm]; }; simITS = derive2 { name="simITS"; version="0.1.1"; sha256="0b62lvknfqli6ki4w360b1ih9nsm6pinaqskgra6vl2nzsim3sal"; depends=[dplyr rlang]; }; - simLife = derive2 { name="simLife"; version="0.5.2"; sha256="1dhrjszfgxr0j4dkc2bwykyj515ji5rkb572nmnyjgkyi652j01v"; depends=[splancs]; }; simMP = derive2 { name="simMP"; version="0.17.3"; sha256="1pzg79dd08ds3pfzxnk9h95gaibicv00mnm0jb4i8v5is4gzrdhr"; depends=[Biostrings BSgenome doParallel foreach GenomeInfoDb GenomicRanges IRanges XVector]; }; simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; - simPATHy = derive2 { name="simPATHy"; version="0.4"; sha256="1blvgaadp7iz0mcgax2xc8wa7aa9f82q09qym1wl8xdv01m29b80"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; simPH = derive2 { name="simPH"; version="1.3.13"; sha256="086060f78f1dmpa6cyhx160blchckplw04gs6997f1hwzswci2l2"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; simPop = derive2 { name="simPop"; version="1.2.1"; sha256="1rpjyffs7s40wlyv77ha6r282p08kp7x252nfiasbgxp5c7x17i0"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp RcppArmadillo vcd VIM wrswoR]; }; - simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; simTargetCov = derive2 { name="simTargetCov"; version="1.0.1"; sha256="0gdqqwg9i2hga6l4s5x7wbbsm20b3sgwrci1g6hc04x1h9aawiw2"; depends=[MASS]; }; simTool = derive2 { name="simTool"; version="1.1.7"; sha256="0q093dlfj23zq3w4schn1ycff79vgzr2s3wgbz2qz4s3b7fddk70"; depends=[dplyr purrr tibble tidyr vctrs]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; @@ -15436,15 +16068,18 @@ in with self; { simest = derive2 { name="simest"; version="0.4"; sha256="1wp08dkbshn5parq69d7iizp4g16qzpdim37kcg09pgsc3aghwaj"; depends=[cobs nnls]; }; simex = derive2 { name="simex"; version="1.8"; sha256="1849wayygyqv0fh1i2qva7ggh2yah2nn0sgbcy9pldxrjq8q9iw0"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7.1"; sha256="0n3n2g07pnpcqhbrjf78lbvqvc136g7jxlx6q27vnk96kwizh3f1"; depends=[mvtnorm survival]; }; + simfam = derive2 { name="simfam"; version="1.0.2"; sha256="1y84x62102l44gnlwgk8bf00ajdpdak9njazrh99bggrcazlsmzm"; depends=[Rcpp tibble]; }; simfinR = derive2 { name="simfinR"; version="0.2.3"; sha256="1swlgwmd5frz72i3vjv7am8s6vr6i7mv76j7hxffk3l7xmq7y53s"; depends=[crayon digest dplyr jsonlite lubridate magrittr memoise purrr]; }; - simfinapi = derive2 { name="simfinapi"; version="0.1.0"; sha256="1g6zi4nj2rkwcd8wnnxc4riqdmf5aarry2jwwsm44i0s4s14z8s8"; depends=[checkmate data_table future_apply httr memoise RcppSimdJson]; }; - simglm = derive2 { name="simglm"; version="0.8.0"; sha256="18phhsq5i9xsx4m0qml8jls9zlcnf3nifn24a7mdbr8l7z1ykf04"; depends=[broom dplyr future_apply Matrix purrr rlang]; }; + simfinapi = derive2 { name="simfinapi"; version="0.2.0"; sha256="10s6m6ahkp6gw1b3axr7m2wrbh34m48aml20yl9kypkwd6af865j"; depends=[bit64 checkmate data_table future_apply httr memoise progressr RcppSimdJson]; }; + simfit = derive2 { name="simfit"; version="0.1.0"; sha256="0wlkkpxvpxd17y2kgfwjyjlrwj48z27mhss8r7yp4410l0a2llgy"; depends=[ggplot2 magrittr]; }; + simglm = derive2 { name="simglm"; version="0.8.8"; sha256="18k3wd9j4hyph9db4h8r7cc93g8f3jkshraj3jn6mpg6k911w78n"; depends=[broom dplyr future_apply Matrix purrr rlang]; }; simgof = derive2 { name="simgof"; version="1.0.2"; sha256="05d7im59i193f266kqy4lr37dw3v20j9niizhj9w8z1qlfqfqsrk"; depends=[ddst]; }; simhelpers = derive2 { name="simhelpers"; version="0.1.1"; sha256="0hnqvymmyimh6244r8a8qmmsb799pgj6j6yvgdnhvjmss8ymif9d"; depends=[dplyr furrr future magrittr purrr Rdpack rlang rstudioapi tibble tidyr]; }; - simmer = derive2 { name="simmer"; version="4.4.2"; sha256="1zffksln9d77h59lbbqk8lbrjlhvic7ianw1912vj6bsvh5k6jjy"; depends=[BH codetools magrittr Rcpp]; }; + simlandr = derive2 { name="simlandr"; version="0.1.1"; sha256="0d3ck7q5wqnnkipw69yn3n8m9005b7xic26yiif9b10r73y6pykg"; depends=[bigmemory digest dplyr forcats gganimate ggplot2 htmlwidgets ks magrittr MASS plotly purrr rlang scales tibble]; }; + simmer = derive2 { name="simmer"; version="4.4.3"; sha256="0vp1dc9kpinl4hkyrig5msssl35wxd9w9jyk7lbknxavjp1aqc69"; depends=[BH codetools magrittr Rcpp]; }; simmer_bricks = derive2 { name="simmer.bricks"; version="0.2.1"; sha256="1s73mfmpjz91n932kjk50aai5j3p1sjibq73yxrjdhlyhiy4d8lp"; depends=[simmer]; }; simmer_plot = derive2 { name="simmer.plot"; version="0.1.16"; sha256="15snsxbljapk1br3psd6ypwa34a6x57zrblgpjyihpaivpxcz7m6"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; - simml = derive2 { name="simml"; version="0.2.0"; sha256="0w3f1mn0mb5ag1kfcz58gwzlplq7yq020g29sv9rr3yhqsc844mr"; depends=[mgcv]; }; + simml = derive2 { name="simml"; version="0.3.0"; sha256="18qrpxf4fsqirfxj4ldkmdyc6zp2px2bcad9j50ihb3r2a33ny3x"; depends=[mgcv]; }; simmr = derive2 { name="simmr"; version="0.4.5"; sha256="0kv3ip0yq3r2a9dglx0pkjvg5bkf9fg2x051dp6z0ld1c0f4p6ms"; depends=[bayesplot boot checkmate compositions ggplot2 MASS R2jags reshape2 viridis]; }; simode = derive2 { name="simode"; version="1.2.0"; sha256="0wlnd01xfdqvjfvmkhkj6nvkrnv5ghjv4md5nhaqsjc8bycawyl0"; depends=[deSolve pracma quadprog]; }; simpleCache = derive2 { name="simpleCache"; version="0.4.2"; sha256="0zayq4n8cc0xgszckjvvf55ygy8hwywv161pp8pqi2k4z91rq4lz"; depends=[]; }; @@ -15452,29 +16087,30 @@ in with self; { simpleMLP = derive2 { name="simpleMLP"; version="1.0.0"; sha256="134h217d3ipzpxgj5fh04pkajqmxdnnlr53ykk27vi86dqk4087p"; depends=[ggplot2 readr]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.3"; sha256="01q04807qws870x1qhvlr3bp0dawy8q4bh00psakhln9j9dl1ljm"; depends=[]; }; simplePHENOTYPES = derive2 { name="simplePHENOTYPES"; version="1.3.0"; sha256="0f5mzlx6vcvq6cvyz4v9yr1k2acgnxizg8clsxdm6hpi4maizrpk"; depends=[data_table gdsfmt mvtnorm SNPRelate]; }; - simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; }; + simpleRCache = derive2 { name="simpleRCache"; version="0.3.3"; sha256="0rjlvq7ch90bjr8wyglhq1px0widdaxrgxfv9d0a5lm1gj5jggan"; depends=[digest]; }; simpleSetup = derive2 { name="simpleSetup"; version="0.1.0"; sha256="0rbzmixk76b3lgi9m7ijhcl6dha7wbbxfgwdhnp2y338zny6c6rm"; depends=[]; }; simpleboot = derive2 { name="simpleboot"; version="1.1-7"; sha256="0769dmrk8rw5v9598p7xlpawybwsdxnrqkxhavqpzy1vwg885575"; depends=[boot]; }; simplecolors = derive2 { name="simplecolors"; version="0.1.1"; sha256="1m0lrvkjqjqq7kynjl8j1cn7kqzfjx6gzgjpjk1gvar2g4ip0a8h"; depends=[colorspace dplyr forcats ggplot2 magrittr stringr]; }; simplegraph = derive2 { name="simplegraph"; version="1.0.0"; sha256="1gcpbljp1fgaprxnmq23izf1h2x3p5dnxlylwqsnlcj50bvm46gq"; depends=[]; }; simplegraphdb = derive2 { name="simplegraphdb"; version="2021.03.10"; sha256="0573hrv23nimmf3d8dgdynii79h84a3mfr4xxk3cggxhsxpfmb2i"; depends=[DBI rjson RSQLite]; }; - simplevis = derive2 { name="simplevis"; version="3.0.0"; sha256="0v23m1qcf7x05c3nd14cnjzvmx821w68r888g8vz2qjk3sh20c02"; depends=[dplyr DT forcats ggplot2 htmltools janitor jsonlite leaflet leaflet_extras leafpop lubridate magrittr plotly readr rgdal rlang rmarkdown scales sf shiny shinycssloaders stars stringr tibble tidyr viridis]; }; + simplevis = derive2 { name="simplevis"; version="4.5.0"; sha256="0q0x6lv30qk5i59h7pxc7fgys4vymxnx52xykb4fl3q2vm9pnd6d"; depends=[dplyr DT forcats ggplot2 htmltools jsonlite kimisc leaflet leaflet_extras leafpop lubridate magrittr plotly purrr readr rlang scales sf shiny shinycssloaders snakecase stringr tibble tidyr viridis]; }; simplexreg = derive2 { name="simplexreg"; version="1.3"; sha256="1zkh00xbddhgz0qn0a5pj12n0hpx4f5kihpfj71x92pmxpzglcxh"; depends=[Formula plotrix]; }; simplextree = derive2 { name="simplextree"; version="1.0.1"; sha256="18jvzcz4fdsi17j7qdqpjvx6zygvlcvpziikb8qxskaib5180l08"; depends=[magrittr Rcpp]; }; - simputation = derive2 { name="simputation"; version="0.2.6"; sha256="0r52avvl5cydmyz5x4l69m97wgd2kicyp2qxxa9x9yjallib890x"; depends=[gower MASS rpart]; }; + simputation = derive2 { name="simputation"; version="0.2.7"; sha256="0jw0j57pgg06ix7yr01bbv314w2dh08idjvsa46s02xkqn37cb7q"; depends=[gower MASS rpart]; }; simr = derive2 { name="simr"; version="1.0.5"; sha256="1j5w93iliykfnpxl9kzh1rp6d3iy26ksj3j7yjl348yvplh0iyjl"; depends=[binom car iterators lme4 pbkrtest plotrix plyr RLRsim stringr]; }; simrec = derive2 { name="simrec"; version="1.0.0"; sha256="17zzbzgdisp5qh0vlbmkjf6a3axnpwj2kw03wymfbb3z557pbxlr"; depends=[]; }; - sims = derive2 { name="sims"; version="0.0.2"; sha256="1vb04ndcvy8851kqirji0468jf8irx5z14nii1nyvh0hvrfb7wg9"; depends=[chk future_apply nlist yesno]; }; + simrel = derive2 { name="simrel"; version="2.1.0"; sha256="1knn8kw9m232agm4b3b0fc132frv5i7k8gxvmrcb1pnz62gsmg04"; depends=[FrF2 ggplot2 gridExtra jsonlite magrittr miniUI purrr reshape2 rlang rstudioapi scales sfsmisc shiny testthat tibble tidyr]; }; + sims = derive2 { name="sims"; version="0.0.3"; sha256="0wsq8plbrmk4xrs8i3g3pqwp2xkhfh1pffva1bwyx44l1r5imzs2"; depends=[chk future_apply nlist yesno]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-10"; sha256="1q7kh44xl7q48vpqbyrp85my6x97l4fqq36bry8vg3k5riihirzf"; depends=[colorspace gridBase sfsmisc]; }; simsem = derive2 { name="simsem"; version="0.5-16"; sha256="0scjb308pb8ivy5blbk1wj9d1yxcqknhvh95a3728crfq2xcqnh0"; depends=[lavaan]; }; simsl = derive2 { name="simsl"; version="0.2.1"; sha256="12dc9lcy11g1yynycvcqm62npq0v13bg6fnykb5m9ijwga4x51il"; depends=[mgcv]; }; - simstandard = derive2 { name="simstandard"; version="0.6.2"; sha256="1473q4wdk6291nhsi384vwdvmbcis7x43dcsyh4fyzc0xz8zd8al"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; + simstandard = derive2 { name="simstandard"; version="0.6.3"; sha256="1l1vny3csrr7krfpn25rzysmwjfv6mclf51y3mq02cimcwq9fzcy"; depends=[lavaan magrittr mvtnorm purrr rlang tibble]; }; simstudy = derive2 { name="simstudy"; version="0.2.1"; sha256="0cczfby7l8s0kmb7jzn2bl67i55nwgc4h3vixg9gsfgds32pisfc"; depends=[backports data_table glue mvnfast mvtnorm Rcpp]; }; simsurv = derive2 { name="simsurv"; version="1.0.0"; sha256="16b2a3br107hy2fc0vann9wf5h9kb5j76baa37g1sfc0h19kg6kr"; depends=[]; }; simtimer = derive2 { name="simtimer"; version="4.0.0"; sha256="1c5017xmh4767d75k4rs1pssyn7p5w41bcsjjmwk4c9g6w1jgx1w"; depends=[]; }; + simtrait = derive2 { name="simtrait"; version="1.0.21"; sha256="0l5x33ik4s8wlh9002dslygprh1q4j3nfr3s4yw8hpq12k5pvg8z"; depends=[PRROC]; }; simts = derive2 { name="simts"; version="0.1.1"; sha256="1b76grf7c14pgyhphplnil4lkzbwn3dih4pv4xdy721ih9n9llby"; depends=[broom dplyr magrittr purrr Rcpp RcppArmadillo robcor scales tidyr]; }; - simukde = derive2 { name="simukde"; version="1.2.0"; sha256="0rjxamspq1csa08blfmif3lknnrwfcpszwzijp465vz1107si8ac"; depends=[ks MASS mvtnorm]; }; - simulator = derive2 { name="simulator"; version="0.2.0"; sha256="18x0c9bf9anbykq9f46fxnnx7g36bh01s4cdmrn7mdygs6ac9c8z"; depends=[magrittr]; }; + simukde = derive2 { name="simukde"; version="1.3.0"; sha256="0mpj8pfrlagc97v53idsiypjcpbaj07y6klanph5lkiwzsgbz8sv"; depends=[ks MASS mvtnorm]; }; simule = derive2 { name="simule"; version="1.3.0"; sha256="0jzyk1r2jfs7qivmy9x44c5bagy55jpy3hf0xpl9xnk409c3y2wd"; depends=[igraph lpSolve pcaPP]; }; sinaplot = derive2 { name="sinaplot"; version="1.1.0"; sha256="0zfq6l8wjvdj7rndsfyh0a2xjlxmn2ij1q50hg3xjfpwrjxcsck8"; depends=[plyr]; }; sinar = derive2 { name="sinar"; version="0.1.0"; sha256="0dywgqmvbrsygyvnln2mc5p6gaxvphr5byx7hkf0nkil54f2jzdf"; depends=[MASS numDeriv]; }; @@ -15485,7 +16121,7 @@ in with self; { sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; siplab = derive2 { name="siplab"; version="1.5"; sha256="1gfncsqgwj7ljm7cik6kmcqynzppqlqlq1f9qpmvzfpf6fd1ccxp"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="3.9-4"; sha256="1myj1dpmqzcyxhkyyvva3xwy1aq5d6l37zg9vhfnc3q4h1psc5hm"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; + sirt = derive2 { name="sirt"; version="3.10-118"; sha256="01aklkw59pr88wmcbb0pf6hw8zclw7g68fgy6z8zv3sfic8b6fq3"; depends=[CDM pbv Rcpp RcppArmadillo TAM]; }; sirus = derive2 { name="sirus"; version="0.3.2"; sha256="1j821vxy81x12yv229k334s8cwjl5fla2wvlhdz01rf688sv0hbs"; depends=[ggplot2 glmnet Matrix Rcpp RcppEigen ROCR]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.48"; sha256="1fh35ndra58dryw222ng7ys3gx1izyk5789k30lyd4n8wqy6sjjd"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; @@ -15496,41 +16132,42 @@ in with self; { siteymlgen = derive2 { name="siteymlgen"; version="1.0.0"; sha256="1176fnf39ars5cdjvy5w2k6b92qv51hy86s71sl8ghr0lwdq9f59"; depends=[data_table dplyr lubridate magrittr purrr rlist rmarkdown stringr yaml ymlthis]; }; sitmo = derive2 { name="sitmo"; version="2.0.1"; sha256="0apdhwy3kxs39agsbvx5vn3xsgb22bf3jrwmr2cmqk9kmxbx740c"; depends=[Rcpp]; }; sitools = derive2 { name="sitools"; version="1.4"; sha256="0c0qnvsv06g6v7hxad96fkp9j641v8472mbphvaxa60k3xc7ackb"; depends=[]; }; - sitree = derive2 { name="sitree"; version="0.1-7"; sha256="08yamivn2vxgrizh5gvvr9cn3cn1657r0p2nrkwbqljqrhmzi7qd"; depends=[data_table lattice latticeExtra]; }; - sitreeE = derive2 { name="sitreeE"; version="0.0-5"; sha256="16m8w0rxb40pimzd06znqskz74jk4rrki4gjy8nk24r1zih2cjq1"; depends=[data_table sitree]; }; - sivs = derive2 { name="sivs"; version="0.2.4"; sha256="0qks0kgagahm4mgd7nd5qqwihrlivlc8q4dk4pcdjb7f15z073j8"; depends=[doParallel foreach glmnet pROC varhandle]; }; + sitree = derive2 { name="sitree"; version="0.1-10"; sha256="1sspbzzr0xdzgx2n4yvj1vih952wz17qzk4vkjwpifbl8xkafw6v"; depends=[data_table ggplot2]; }; + sitreeE = derive2 { name="sitreeE"; version="0.0-7"; sha256="07x7p0rqkmjlf6lykx9ckh9dbwjqjkmszrhar1vmpy54i8gv3ha7"; depends=[data_table sitree]; }; + sivs = derive2 { name="sivs"; version="0.2.5"; sha256="16w1yixb2wfgprnfm408l11nz9j28by7sz82x17rzmjb6p3n1jw5"; depends=[doParallel foreach glmnet pROC varhandle]; }; sizeMat = derive2 { name="sizeMat"; version="1.1.2"; sha256="1vbndadsn80ddrg471vp1qxf0gan38w6dkjk1p2npvfb47wdjj2h"; depends=[MASS matrixStats MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.8.7"; sha256="1g4qabg654kwdm09ihp4h3mg64a1d7a7gsn6w56rwsidqqaxilq0"; depends=[bayestestR dplyr effectsize ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; + sjPlot = derive2 { name="sjPlot"; version="2.8.9"; sha256="07b9p5wbb6xmyapg9j6i4cdcj7j9wj9gi30gljj6j2lj1flgdd7q"; depends=[bayestestR datawizard dplyr effectsize ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.1"; sha256="0cz5qc5lsipd3nlkzj8j03xmpzxp52c3q5av8pr7fm3vsdclawfk"; depends=[rJava]; }; - sjlabelled = derive2 { name="sjlabelled"; version="1.1.7"; sha256="0d3fsjd2gxchv8mlx9l5pf8xvkmx4pgvizam83f3qss07bmvpzwg"; depends=[insight]; }; - sjmisc = derive2 { name="sjmisc"; version="2.8.6"; sha256="1nfrkv5jfnwb85blpv7yk7xac1myzi2c30bqcf7xicniknkjwycr"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; + sjlabelled = derive2 { name="sjlabelled"; version="1.1.8"; sha256="17gskxr43rgbg7syla3b78g2qgksq2kj07iad4139xycqxblxya0"; depends=[insight]; }; + sjmisc = derive2 { name="sjmisc"; version="2.8.7"; sha256="17hcjb2j690qi2zrkwc14sr1wsid6dy6v7bfsf0bc94ql812k8g2"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; sjstats = derive2 { name="sjstats"; version="0.18.1"; sha256="1cv80yjnyh6qihxf57zivihhia20gibr5f03x8aspy6382wnwlka"; depends=[bayestestR broom dplyr effectsize emmeans insight lme4 magrittr MASS modelr parameters performance purrr rlang sjlabelled sjmisc tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; - skedastic = derive2 { name="skedastic"; version="1.0.1"; sha256="04s5cvv2zcdwmkv06w79va8aaxb0vx6c8bmz8sjpblvsrgc9c7nv"; depends=[arrangements bazar berryFunctions boot broom CompQuadForm cubature data_table dplyr expm gmp MASS mvtnorm pracma qpdf quantreg Rdpack Rmpfr]; }; + skedastic = derive2 { name="skedastic"; version="1.0.3"; sha256="0f6pq5mj3mbam13283z4zyw7zgkvsld5y7ak0ahby9gb0na1zyhm"; depends=[arrangements bazar berryFunctions boot broom CompQuadForm cubature data_table expm gmp Hmisc MASS mvtnorm pracma quantreg Rdpack Rmpfr]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; sketch = derive2 { name="sketch"; version="1.0.3"; sha256="0d2kcf6q2xpvxzf0js8qbw0apkj8lbx1znzqcnidsgwn5p7ni20a"; depends=[base64enc glue htmltools jsonlite magrittr purrr rlang rstudioapi shiny]; }; sketcher = derive2 { name="sketcher"; version="0.1.3"; sha256="011lx15whrdj5q5h33h9brkzbn2fnpm1nx9ip1v9xl5xfkbj7952"; depends=[downloader dplyr imager jpeg magrittr png readbitmap stringr]; }; - skewlmm = derive2 { name="skewlmm"; version="0.2.3"; sha256="09ynpw603765qvxiy4qpsy7x0da6vavx1bk7cq4x4jzsbc8nh18i"; depends=[dplyr ggplot2 moments mvtnorm nlme numDeriv purrr]; }; + skewMLRM = derive2 { name="skewMLRM"; version="1.2"; sha256="0hcdq1x9z5p2yz6bv6gr9f6llz74p6187bqyr6q0p7037i6a5705"; depends=[clusterGeneration doParallel foreach MASS matrixcalc moments mvtnorm]; }; + skewlmm = derive2 { name="skewlmm"; version="1.0.0"; sha256="1z7rz520vmjqmnak2zgxnnj7yhg7k2phclx3ilvkwzn9v8pd224j"; depends=[dplyr furrr future ggplot2 ggrepel haven moments mvtnorm nlme numDeriv optimParallel purrr]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; skimr = derive2 { name="skimr"; version="2.1.3"; sha256="02q5l1l1a9m602dg55gbb1zd3ymh0gxy6r815dj8cp769i8hqla1"; depends=[cli crayon dplyr knitr magrittr purrr repr rlang stringr tibble tidyr tidyselect vctrs withr]; }; sklarsomega = derive2 { name="sklarsomega"; version="2.0-1"; sha256="0pk3dk0bsbby4wnj8sad8yllix48hq3ayv3709kglc97d8bhjzha"; depends=[extraDistr hash LaplacesDemon Matrix mcmcse numDeriv spam]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-13"; sha256="1nks9k910fc0m07wpi9ridpyvgnnjlgw821mnvpv8skr4i75zy1w"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.64.2"; sha256="07fchgv0aqgw0hvcav08zzfzqg8nbw8ibbpd3bd11jx1fikx4vyr"; depends=[base64enc car crayon doParallel doRNG foreach future iterators kableExtra knitr lazyeval lme4 lmerTest magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; + sknifedatar = derive2 { name="sknifedatar"; version="0.1.2"; sha256="0zi9anrxg9zkgxlzlfyry5i5zlj3fs8580mp6xckkl096dry9ih0"; depends=[cli dplyr knitr magrittr modeltime parsnip purrr rlang rsample tibble tidyr tune]; }; + skpr = derive2 { name="skpr"; version="1.0.0"; sha256="1p8wwan29jgc4p9pk0x19wwqnvy012bhci6s49za1wzvzxh6w7ia"; depends=[car doParallel doRNG foreach future gt iterators lazyeval lme4 lmerTest magrittr progress promises Rcpp RcppEigen rintrojs scales shiny shinyjs shinythemes survival viridis]; }; skynet = derive2 { name="skynet"; version="1.4.0"; sha256="1ir8sw99fvdy8zp7ncgdnggr8hv1ph21kvdi9my42vlsh2fqi5ja"; depends=[data_table dplyr geosphere ggplot2 ggrepel httr igraph leaflet maps stringr]; }; - slackr = derive2 { name="slackr"; version="2.3.0"; sha256="09wskmg352rpj95l661qc78b9i1kcaj2hyp1pgd592ikpy5q2r9f"; depends=[cachem dplyr ggplot2 httr jsonlite magrittr memoise tibble xtable]; }; + slackr = derive2 { name="slackr"; version="3.2.0"; sha256="10klljhkycnyqkzq73gj71c2phdqx9l3lb2jzancc59x21wjqn3b"; depends=[cachem dplyr ggplot2 httr jsonlite magrittr memoise rlang tibble withr]; }; slam = derive2 { name="slam"; version="0.1-48"; sha256="1ppsvkph4v1dffxgp12a4wnr9arj7pkmh4qv0and3f6nbz9k42qa"; depends=[]; }; - slanter = derive2 { name="slanter"; version="0.1-0"; sha256="161ldggjrd7sbp38fip92br5izcqbwfmxcmmg95dm13sviabxb7k"; depends=[Matrix pheatmap pracma]; }; + slanter = derive2 { name="slanter"; version="0.2-0"; sha256="024dkman0r5qzc215gw0ds932vdaz8krrhv64fjw9pni37ixc3mf"; depends=[Matrix pheatmap pracma]; }; sld = derive2 { name="sld"; version="0.3.3"; sha256="1ggvyx1nsfc1wwwzlqgvk6p5xxq6r6yx2rjv0290q7p06gc3i1ll"; depends=[lmom]; }; sleekts = derive2 { name="sleekts"; version="1.0.2"; sha256="0syk244xrsv8hz5sxm7wizk0kyn1nc6z4c63c8xn57fz130zj75k"; depends=[]; }; sleepr = derive2 { name="sleepr"; version="0.3.0"; sha256="1ka4pl6a09d1qga5svcirc5ywmzz9pcml09053745lz3p1v8fnn3"; depends=[behavr data_table]; }; - sleepwalk = derive2 { name="sleepwalk"; version="0.3.1"; sha256="1dr6iaiq5ixh7daih1qnaxn4jyqlqvk326lnmynhw7if4z1hj9r6"; depends=[cowplot ggplot2 httpuv jrc jsonlite scales]; }; + sleepwalk = derive2 { name="sleepwalk"; version="0.3.2"; sha256="1y0945r9ksz8x6w5rx31sm9x2q2ydd9sc1fwa0paq5f11hygss5d"; depends=[cowplot ggplot2 httpuv jrc jsonlite scales]; }; slfm = derive2 { name="slfm"; version="1.0.1"; sha256="0s7fdvr4fvsb4789f9ly2x820g4xvabl04wk7k6i8pd5ckj2xjhy"; depends=[coda lattice Rcpp RcppArmadillo]; }; - slga = derive2 { name="slga"; version="1.1.2"; sha256="1nw2jb6r7xb2z20kqa7fdcipn9a28q84hrr6j0bykd86s46fb9sz"; depends=[httr raster sf xml2]; }; slgf = derive2 { name="slgf"; version="0.1.0"; sha256="0wjj9mbf33x5isi5h3mdas283aw9x2hi5hyqgqbi941vhwf6v31l"; depends=[numDeriv Rdpack]; }; slickR = derive2 { name="slickR"; version="0.5.0"; sha256="1zxj6ivdhi9wvqcrl0p8clwk8nxqmg1bijqamp0lhq82dpyrdngp"; depends=[base64enc htmltools htmlwidgets lifecycle xml2]; }; - slider = derive2 { name="slider"; version="0.2.1"; sha256="1jijh8f3qcn8fa677sqvgl2fb4r5vca1cw4l2vbcqscxb2hr4bqw"; depends=[ellipsis glue rlang vctrs warp]; }; + slider = derive2 { name="slider"; version="0.2.2"; sha256="1vxk2bc33svwcki2j8zr5jcxswh27i0fqgzjw2a5a1pp9dh3fmd3"; depends=[ellipsis glue rlang vctrs warp]; }; slideview = derive2 { name="slideview"; version="0.1.0"; sha256="0zq5s6qdxn6ri88pp0wf2kg2k4byrrsfvwh0ai892p4szqbc3w4v"; depends=[htmltools htmlwidgets lattice raster viridisLite]; }; slim = derive2 { name="slim"; version="0.1.1"; sha256="0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1"; depends=[data_table MASS]; }; slimrec = derive2 { name="slimrec"; version="0.1.0"; sha256="1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377"; depends=[assertthat bigmemory glmnet Matrix pbapply]; }; @@ -15541,21 +16178,22 @@ in with self; { slouch = derive2 { name="slouch"; version="2.1.4"; sha256="09ffx657hs913prv0rifhsz60h39lk0h4z28myx6yzxcfdk4f48d"; depends=[ape crayon memoise]; }; slowraker = derive2 { name="slowraker"; version="0.1.1"; sha256="0glc3ldvbqkvzfvhs4s5mzx1kfz05px4k7rx5jfp9dm9d0gfpvsx"; depends=[NLP openNLP SnowballC]; }; slp = derive2 { name="slp"; version="1.0-5"; sha256="0i9iv0s1wdp9cyzr8qixh6c7qvrj025vll13gyf8dfbidrp6hryl"; depends=[mgcv]; }; - slurmR = derive2 { name="slurmR"; version="0.4-1"; sha256="00ihaq2f86spl4ra41lyszrgn52vgpfw0bv0px23gc6qngxzxd6y"; depends=[]; }; - sm = derive2 { name="sm"; version="2.2-5.6"; sha256="0c4whcx879gb4lwvqnzxl5n9xgpcqh2c54ip9ami3mwfprzcv45q"; depends=[]; }; + slurmR = derive2 { name="slurmR"; version="0.5-1"; sha256="07c192q3scf5w0jb5zkkadgpggfs9dbxy816lv9llxva7pgqjdmx"; depends=[]; }; + sm = derive2 { name="sm"; version="2.2-5.7"; sha256="03z8igsjqr32x407asxvkrbayvm6yhv9xyfs0n8fkmv8zk5a41r6"; depends=[]; }; smaa = derive2 { name="smaa"; version="0.3-0"; sha256="0y7j4q147fdk7fffyinc803mfzzsmcdfx8bp695w3wkq1wwy9kyl"; depends=[]; }; - smacof = derive2 { name="smacof"; version="2.1-2"; sha256="1vhlqg4shxgrvjicxn4yljbc34b4rz2m7ndhcr8pn1xhy2mqakp2"; depends=[candisc colorspace doParallel e1071 ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; - smacpod = derive2 { name="smacpod"; version="2.1.1"; sha256="0mc8g0c3gl4a3bjd9qpgi4mrq28ky2c8hcl4qd192b21rbkj218y"; depends=[abind pbapply plotrix sp spatstat spatstat_core spatstat_geom]; }; + smacof = derive2 { name="smacof"; version="2.1-3"; sha256="1221k0bkx47j0cpc2f2flhq3f4x7r4mvm4fdv0ba1iaiw10di7h1"; depends=[candisc colorspace doParallel e1071 ellipse foreach Hmisc MASS nnls plotrix polynom weights wordcloud]; }; + smacpod = derive2 { name="smacpod"; version="2.2.2"; sha256="17zxh0p0f1y1dlqphlly3czhjxm7mqvbmbfyccjixm0wxczf86wf"; depends=[abind pbapply plotrix sp spatstat_core spatstat_geom]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; - smam = derive2 { name="smam"; version="0.5.4"; sha256="0v7wd1jkacfzjcg4g44dl1d7qxn6as6vicsyafkmrczgdzmrx1md"; depends=[doParallel doSNOW EnvStats foreach Matrix nloptr numDeriv Rcpp RcppGSL RcppParallel]; }; + smam = derive2 { name="smam"; version="0.6.0"; sha256="1vgsx1n9gkkjnv5lrrznpfqvh019qcjki6gy625k3ykqg5zg229v"; depends=[doParallel doSNOW EnvStats foreach Matrix nloptr numDeriv Rcpp RcppGSL RcppParallel]; }; smapr = derive2 { name="smapr"; version="0.2.1"; sha256="1gcq66gs6968c5h303dqd2jyw2rcdwxv642ki1cmpdj6ix665dpr"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; + smartDesign = derive2 { name="smartDesign"; version="0.72"; sha256="1mq8h2zwj8mrq4s2bl3s6hzizpdjbl69c984hydxvzx2vgq1v8za"; depends=[knitr]; }; smartR = derive2 { name="smartR"; version="0.62.3"; sha256="0ardb4arhr7qmr30b3ahf7hkwlys9i420bm8h2688phahgfkk0y8"; depends=[caret chron cluster foreign ggplot2 ggrepel ggthemes gridExtra gstat gsubfn gWidgets2 gWidgets2RGtk2 igraph jpeg jsonlite lattice mapdata mapproj maps maptools marmap mtsdi nnls PBSmapping plyr R6 RColorBrewer reshape2 rgdal rgeos rjags ROCR rpart scales shape sp spdep sqldf vegan]; }; smartmap = derive2 { name="smartmap"; version="0.1.1"; sha256="0pxbjkkknng7xa8ihba69n1a2w9052fsbb0w8fq1y1qrqmmibwdi"; depends=[leaflet magrittr sf]; }; smartsizer = derive2 { name="smartsizer"; version="1.0.3"; sha256="1jfhba8p5flz4v0m770kb3p2gw4vgzpxqb0ngl9fhw30jzkx6nwd"; depends=[MASS]; }; smartsnp = derive2 { name="smartsnp"; version="1.1.0"; sha256="1gzzhys6bja55iclkji254kri6r3iamiw7bv881mp615wi9r3hx2"; depends=[bootSVD data_table foreach Rcpp RcppArmadillo Rfast RSpectra vegan vroom]; }; smatr = derive2 { name="smatr"; version="3.4-8"; sha256="0qqqbg65flxh48sw7x90zvgzbpcfzb1811h0pz3zlhdw9a7khs9n"; depends=[]; }; smbinning = derive2 { name="smbinning"; version="0.9"; sha256="1sr0nsqqzxdf402g9qx1ycigbh330idl9n2cyli4x4zxj1nqm3yv"; depends=[Formula gsubfn partykit sqldf]; }; - smcfcs = derive2 { name="smcfcs"; version="1.5.0"; sha256="03qawdzh8dyg249pw3vqja5g5f26zf4m2ys61cqx6jnyb34aks34"; depends=[MASS rlang survival VGAM]; }; + smcfcs = derive2 { name="smcfcs"; version="1.6.0"; sha256="0kvk9izi7bncs14pla7h6b9wjn475f6i6i7vb8qv3fp4vyqpxp6d"; depends=[abind checkmate MASS rlang survival VGAM]; }; smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; smcure = derive2 { name="smcure"; version="2.0"; sha256="1j7fxnb0sx57a0l929c3haz4f1y829ymlq0cvdh0cia4qp6ydv60"; depends=[survival]; }; smd = derive2 { name="smd"; version="0.6.6"; sha256="1nvlka2prqh1hcj4ngpj2c2gmfryziijqwjyfy9fmq78skiq0jij"; depends=[MASS]; }; @@ -15566,23 +16204,23 @@ in with self; { smfsb = derive2 { name="smfsb"; version="1.3"; sha256="1328w7zpwd3nam6ha4bh14g919jjl87v323ijmbp1j71gc64nn2i"; depends=[abind]; }; smicd = derive2 { name="smicd"; version="1.1.2"; sha256="1v80sshsp3qlc1y7yz1pl4s2jk6khdsli3z2v0cjxfsv1izfd02x"; depends=[formula_tools Hmisc ineq laeken lme4 MuMIn mvtnorm truncnorm weights]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; - smmR = derive2 { name="smmR"; version="1.0.2"; sha256="1aw9vf0vkjka3000gqd1nzx7gq8s5w95rah85w958wrg71w85byf"; depends=[DiscreteWeibull Rcpp RcppArmadillo seqinr]; }; + smmR = derive2 { name="smmR"; version="1.0.3"; sha256="0b6w2k5j65jdngc871ch9ragr7qgwbkl4nhk3gqnbpvkr9m4x88f"; depends=[DiscreteWeibull Rcpp RcppArmadillo seqinr]; }; smnet = derive2 { name="smnet"; version="2.1.2"; sha256="17zv02f1g86s55g81anhqrxfgy2biamsw606byxwh9kdc5l4vfv6"; depends=[RSQLite spam SSN]; }; smog = derive2 { name="smog"; version="2.1.0"; sha256="1mnnvp6crjwwiym16q4hmn9zwna1gblwqjlan4x9zyvgp1j70k26"; depends=[doParallel dplyr foreach ggplot2 magrittr Rcpp RcppArmadillo Rdpack rmarkdown tidyr]; }; smoke = derive2 { name="smoke"; version="2.0.0"; sha256="1jdl5swg66vqryd40rrqpsnkczmsiaf5x6vlfv774vbnrc6q2v2g"; depends=[Rdpack]; }; smoof = derive2 { name="smoof"; version="1.6.0.2"; sha256="14zwrsyhbrwggwiaq8vxps8cgkp6glb14b2cp2ph1ppa0abvlbfq"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="3.1.1"; sha256="0iiqr39c023g2vjqqrykwhl3byhjf2qig3slxhrdd5vvmcqpnqxh"; depends=[greybox MASS nloptr pracma Rcpp RcppArmadillo statmod zoo]; }; + smooth = derive2 { name="smooth"; version="3.1.3"; sha256="0gxlfmlakwmz4l673qfxxnsp187gq50f4qrirh3x5zqrwwxrwc6z"; depends=[greybox MASS nloptr pracma Rcpp RcppArmadillo statmod zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.3"; sha256="11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; smoothROCtime = derive2 { name="smoothROCtime"; version="0.1.0"; sha256="03iihjxb5xdaf74cm9cajqqjli754mdmv5v1y4hla9vv23017ca1"; depends=[ks]; }; smoothSurv = derive2 { name="smoothSurv"; version="2.3"; sha256="0rxgps184hl49g8gpa7hjvdl2i01qkghmvlv8blwwr9rfk19aq1s"; depends=[survival]; }; smoothedLasso = derive2 { name="smoothedLasso"; version="1.6"; sha256="0007i40a12jgavgd95fbpiil1s331qd05ww6v19l49lbnlk3ldxg"; depends=[Matrix Rdpack]; }; smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; - smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; + smoothie = derive2 { name="smoothie"; version="1.0-3"; sha256="1ari4av4vsydaxg56vsfifc50kxsqy8xlxl7by32capc6pcjwvq8"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; - smoothr = derive2 { name="smoothr"; version="0.1.2"; sha256="0226l760rwvxkabz2r0zzpsbh1kbd65jx5xr1plqyq3gvqh1176q"; depends=[raster sf units]; }; + smoothr = derive2 { name="smoothr"; version="0.2.2"; sha256="1z1ha67b4fw6mkmvs2g80mc1id215rkzvz7bpzk1jdp6fibqpr2b"; depends=[raster rgeos sf units]; }; smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; - smoots = derive2 { name="smoots"; version="1.0.1"; sha256="1kk1hvfqxslg76gy8gzaidv3d55pflyvbv3ski6rkk0l9lwbb2q1"; depends=[]; }; + smoots = derive2 { name="smoots"; version="1.1.1"; sha256="1cmgig8041clva1jrcv6j93k4anahraa1prfp8pwq0smifalbhzc"; depends=[future future_apply progress progressr Rcpp RcppArmadillo]; }; smotefamily = derive2 { name="smotefamily"; version="1.3.1"; sha256="062yps71bqnyff1hzqb7yvigvqg2lnc24r9gfp8m3zhvmyprk3cp"; depends=[dbscan FNN igraph]; }; smovie = derive2 { name="smovie"; version="1.1.3"; sha256="0gani6ywckvp4p72drl87vlvwcszzn5n71iqrwdgnyyr6r69ax7b"; depends=[rpanel]; }; smpic = derive2 { name="smpic"; version="0.1.0"; sha256="0ff2146gjcrc6nvrbf4779jh076abhb843zzlk2zvqir13qfap61"; depends=[ggplot2 imager stringr]; }; @@ -15591,14 +16229,14 @@ in with self; { smurf = derive2 { name="smurf"; version="1.1.2"; sha256="00q54pg42anilhcshhjvv277mkszbpzpkf1g7srs7cjd5skjvsaf"; depends=[catdata glmnet MASS Matrix mgcv RColorBrewer Rcpp RcppArmadillo speedglm]; }; sn = derive2 { name="sn"; version="2.0.0"; sha256="0sl8qzy9isy5fq8qxh1fg5285jzgy895nbgz8gdq5d0r6zdwrmmb"; depends=[mnormt numDeriv quantreg]; }; sna = derive2 { name="sna"; version="2.6"; sha256="0ai0v4538d30m4wks5s3lch1yfmx1ml0nnrz7ihs097lv586a09s"; depends=[network statnet_common]; }; - snahelper = derive2 { name="snahelper"; version="1.2.0"; sha256="0pr4lb4606icxdvsraf5bcpaicwp1fvng9d5rymkwqizg4k5xqlk"; depends=[colourpicker DT formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; + snahelper = derive2 { name="snahelper"; version="1.3.0"; sha256="130pzmnvcqqgpi7h8fn61qrshq61h6w5i25shbng6bbw5kw4kchf"; depends=[colourpicker DT formatR ggplot2 ggraph graphlayouts igraph miniUI rstudioapi shiny]; }; snakecase = derive2 { name="snakecase"; version="0.11.0"; sha256="1ky1x2cp5rd0ffd9m1fji9sq4z4jsrpxzg30brw8bb4ihfjj114r"; depends=[stringi stringr]; }; + snap = derive2 { name="snap"; version="1.1.0"; sha256="02bvs1r72y59p33a7yj1rqw75h08pvl794hdvvm15jzq1hy6j0ra"; depends=[CORElearn dbscan dplyr forcats ggplot2 keras purrr readr reticulate stringr tensorflow tictoc]; }; snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; snem = derive2 { name="snem"; version="0.1.1"; sha256="1r8l7cs1y82fh7bdfl18ilw4fria1cabghqddnfr34vfp85cndk9"; depends=[mvtnorm]; }; snfa = derive2 { name="snfa"; version="0.0.1"; sha256="01k2nw8b8mwsd07jijfqk3rj88l9m36c5jai7qma56fjxx23s3wb"; depends=[abind ggplot2 prodlim quadprog Rdpack rootSolve]; }; snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; - snipEM = derive2 { name="snipEM"; version="1.0.1"; sha256="1ls3c9f47lgrnja8p34iz2md2mf5jva9rn5n1h3a43zs29g019v8"; depends=[MASS mvtnorm Rcpp RcppArmadillo]; }; snn = derive2 { name="snn"; version="1.1"; sha256="0yywn3v1iz9xizwli3gmzprkx66b5a813mbp8hq2vsj8n4lfj8r5"; depends=[]; }; snotelr = derive2 { name="snotelr"; version="1.0.4"; sha256="0ni2hmlbxvhs9mwbf679yysd9gkj4fknfdwi7a6b32jsf0v6mg92"; depends=[httr magrittr memoise RSelenium rvest shiny wdman xml2]; }; snow = derive2 { name="snow"; version="0.4-3"; sha256="1n3n8pva9s34fvlw32yng0x416lmbv7q1fsd0ywa4kikmxym64l5"; depends=[]; }; @@ -15616,20 +16254,20 @@ in with self; { sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; sobir = derive2 { name="sobir"; version="0.1.2"; sha256="0di9mk1c1jf8yr7jpmfm19w2w3p9lz1mkgrv3bmfyab83aghvbfp"; depends=[DescTools devtools dplyr ggplot2 raster rlang scales sp statmod stringr tidyr usethis]; }; sobolnp = derive2 { name="sobolnp"; version="0.1.0"; sha256="00rmigjyd3fsmhrhbvjzrfsl4ir0xpfr4xbgjws6vkx2rmcqnq1s"; depends=[minqa np pbmcapply]; }; - soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; }; + soc_ca = derive2 { name="soc.ca"; version="0.8.0"; sha256="16l0synym91b7djgzdcz43dnvw44fkyxky9gm37ixbxzq1czdp9w"; depends=[dplyr ellipse FactoMineR flextable forcats ggplot2 ggrepel gridExtra htmlTable magrittr Matrix purrr RColorBrewer reshape2 rlang shiny stringr tibble tidyr]; }; socceR = derive2 { name="socceR"; version="0.1.1"; sha256="1vd0r3vixavg1br2q3kfn3nvl7dw854vkcfwcvyw411k84ivb13y"; depends=[Rcpp]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; + socialh = derive2 { name="socialh"; version="0.1.0"; sha256="03ms1plsrs7lhxh4fb2kwrhayly4f53q61czzycjmbfp83fg1xmj"; depends=[data_table dplyr magrittr]; }; socialmixr = derive2 { name="socialmixr"; version="0.1.8"; sha256="0zhinhjv1ablhdyz41a1ii1s3mzqg8f2ns7xcjnlwa9fx364x5a2"; depends=[countrycode curl data_table httr jsonlite lubridate oai stringr wpp2015 XML]; }; sociome = derive2 { name="sociome"; version="2.0.0"; sha256="1r49v4ajjv2v10478bmbjv3hnyzi9srw6q04x4gl0fnqch45hn6p"; depends=[censusapi dplyr magrittr mice psych purrr rlang stringr tidycensus tidyr]; }; socviz = derive2 { name="socviz"; version="1.2"; sha256="1294xwy26vshmaiw3pkx3f90j8g6fv64gygv88b7lnz6fhai1nq5"; depends=[dplyr fs magrittr rlang tibble]; }; sodavis = derive2 { name="sodavis"; version="1.2"; sha256="1jf5sml51qxlpgv5b1rvyig4dm4ijw2hpnk85zf790jp22xm64jw"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; sofa = derive2 { name="sofa"; version="0.4.0"; sha256="1w78f8pnx4vh6znpwwcy9k4j795zji4bv88mi6ihdv09ar7if7yv"; depends=[crul jsonlite mime R6]; }; - softImpute = derive2 { name="softImpute"; version="1.4"; sha256="07cxbzkl08q58m1455i139952rmryjlic4s2f2hscl5zxxmfdxcq"; depends=[Matrix]; }; + softImpute = derive2 { name="softImpute"; version="1.4-1"; sha256="1v2a4d688ij5zcvkzpra9yx40xckdfnllnfnyq2450zf3n1kjk7a"; depends=[Matrix]; }; softclassval = derive2 { name="softclassval"; version="1.0-20160527"; sha256="1f5qj5sajy3dg0mgss6f9w6v5a2prcypld9jcv457bd4n4a409kr"; depends=[arrayhelpers svUnit]; }; - soilDB = derive2 { name="soilDB"; version="2.6.1"; sha256="0v9zyjj75cnv5vh1pvsm8i0si1idy4q3kl6vdm6fyk0pyzwgirm7"; depends=[aqp curl data_table DBI plyr raster reshape2 sp xml2]; }; + soilDB = derive2 { name="soilDB"; version="2.6.5"; sha256="1h5zmcv8vqq05svz3wnfrg2wszlzw285s6imd32ik10laidlz4yd"; depends=[aqp curl data_table DBI plyr raster reshape2 sp xml2]; }; soilassessment = derive2 { name="soilassessment"; version="0.2.1"; sha256="14hqwxpqb19g5r7abar40kprfilzxi24mg083gypvxzs48pb6gn8"; depends=[arm caret Cubist deSolve e1071 FuzzyAHP Hmisc kernlab maptools nnet qrnn quantregForest randomForest ranger raster rgdal rpart soiltexture sp]; }; - soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="4.0"; sha256="0b4fkc1plmafjdlad7s4pvca6lafmrswwpfddvsh73734s7cslmq"; depends=[boot fields MASS shiny shinydashboard]; }; soiltexture = derive2 { name="soiltexture"; version="1.5.1"; sha256="1l9npvk910488qzd45ibc7ss557hnkb78lx1p6fs3nhl8sacgyxh"; depends=[MASS sp]; }; soilwater = derive2 { name="soilwater"; version="1.0.5"; sha256="11gal7hj73j82qx65krmzpmf0gpm41ph8hw70df46dbf4w23vvjn"; depends=[]; }; @@ -15637,82 +16275,84 @@ in with self; { solaR = derive2 { name="solaR"; version="0.45"; sha256="1vxpwaizjxy27r54anhf48pf97lm4ck750m0p4kmh716irmhp319"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; solartime = derive2 { name="solartime"; version="0.0.2"; sha256="1lg7sc3vxsqqiq6a3qsl14gcc1fdi15h1mqcfjmq2j5xna6s5msx"; depends=[lubridate]; }; - solitude = derive2 { name="solitude"; version="1.1.1"; sha256="0cd3ppkydpak5sx49fd7wh1ha5lhphy51hfnsl480d88fx8cc6vf"; depends=[data_table future_apply igraph lgr R6 ranger]; }; + solitude = derive2 { name="solitude"; version="1.1.3"; sha256="1cqbcm72fq13lp0lazfngdylcasck1ffrj16ggxlryzps1181rhy"; depends=[data_table future_apply igraph lgr R6 ranger]; }; solrad = derive2 { name="solrad"; version="1.0.0"; sha256="13ybllvmig1yqsy4md4kazs83hxb9lrlwy64yw1wwr1w6sxpbnp6"; depends=[]; }; - solrium = derive2 { name="solrium"; version="1.1.4"; sha256="0x83s83r4sr4r9cgk9fgcw6xz778m4gg14fzwib3qja6ax2xpk2z"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.10.1"; sha256="0f3jh56wyvm8s47r879xq1ry0bikayq9x79lc2zzkmcyz5s0k2c4"; depends=[dplyr httr jsonlite mime]; }; + solrium = derive2 { name="solrium"; version="1.2.0"; sha256="16x4gjk0x6m9yjq9sk3kwbw8qm7w16vmbnfy5xa9zikw96cl3iky"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; + solvebio = derive2 { name="solvebio"; version="2.11.0"; sha256="00n9ziayjfb645m63nidbnk594y3acfah5rs34fma4gb8qb3cl4s"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1.1"; sha256="197ajnnp92qh807a55z0i9z8nw0vmf5vvr216nxjwa2l9kw8c84k"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="4.1.3"; sha256="0cm27niyw095v0dq5j9jbk704rld74dh37hwnqs3k4x6gjklpvmc"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo RcppProgress]; }; + sommer = derive2 { name="sommer"; version="4.1.4"; sha256="1qx56h51ci7zr3idgcc74vfm5x9h5pakkik0hjmgrzv4bnyfsd58"; depends=[crayon lattice MASS Matrix Rcpp RcppArmadillo RcppProgress]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; - sonicLength = derive2 { name="sonicLength"; version="1.4.6"; sha256="0jh9zk908afqxacccsph6477cc8sbcc1vxbv7jz8ppgc20imw932"; depends=[]; }; + sonicLength = derive2 { name="sonicLength"; version="1.4.7"; sha256="1wvdcjk641kcmflda0mibqr519qbqgb26mgwibjhm6pzgvwpy2dg"; depends=[]; }; sonicscrewdriver = derive2 { name="sonicscrewdriver"; version="0.0.4"; sha256="0myn1arwswinhjksz0ijq8242f4c5l5phz2m6brd83avcpf707g6"; depends=[ggplot2 hms jsonlite mime seewave suncalc tuneR]; }; sonify = derive2 { name="sonify"; version="0.0-1"; sha256="1wkqqgf8fhhaz1dmri2zzr8cdwmx3cgrxbprrz3yily5r1m17d15"; depends=[tuneR]; }; soobench = derive2 { name="soobench"; version="1.9.18"; sha256="06wzlxdw0l6jc1zqsgkn120ibprfalwqd38xh7dpi30vdqiqskcc"; depends=[]; }; soptdmaeA = derive2 { name="soptdmaeA"; version="1.0.0"; sha256="03n1y82myq0rz14awjnx9nx1dz3dxqq58m13cw7a7ncap7fmw9r5"; depends=[igraph MASS Matrix]; }; soql = derive2 { name="soql"; version="0.1.1"; sha256="12wvbxy9xx140b7mga4ma7hkg4q6kv549gkq15fnf4dn8q43x8nf"; depends=[]; }; + sorcering = derive2 { name="sorcering"; version="0.9.2"; sha256="1sh1c9pz2cll3jbijjcrd66kg64l2y2aaxrq1h93fvgznxm01ach"; depends=[mathjaxr Rcpp RcppArmadillo Rdpack]; }; sorocs = derive2 { name="sorocs"; version="0.1.0"; sha256="0gy23rldhnlz6jmf9rdzl4mmfkn5gjcavq2jfcz6dgjafl3v9vgl"; depends=[MASS MCMCpack mvtnorm]; }; sortable = derive2 { name="sortable"; version="0.4.4"; sha256="15wn8xnvzawqxb97dlzd5v2qrxxizply6ah2ry0h6wrywdz2xppl"; depends=[assertthat ellipsis htmltools htmlwidgets jsonlite learnr shiny]; }; sorvi = derive2 { name="sorvi"; version="0.7.26"; sha256="19lfrc4bdiljs437w3a2bpf7abnkv0934dh929bbj2w1w8rzghjn"; depends=[dplyr ggplot2 RColorBrewer reshape2]; }; - sos = derive2 { name="sos"; version="2.0-2"; sha256="0x8hs950s05ydh7vjjbpzfj1if01h1z9dz32xszik6fz94na279l"; depends=[brew]; }; + sos = derive2 { name="sos"; version="2.1-0"; sha256="14wbq7vkzn4bjx3zpg29vn1n6wz9117rn2lwxi9dj45kzccp7a94"; depends=[brew]; }; sotkanet = derive2 { name="sotkanet"; version="0.9.76"; sha256="1lha5nicfxpkfaayrswnpipbc08s9blbml65fr5iasvmxhfrfadz"; depends=[rjson]; }; sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundcorrs = derive2 { name="soundcorrs"; version="0.4.0"; sha256="1azvsv3bghlab8q24wbb6xwd5a4cydx1cagvhk8h0h5ib9957zab"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="2.0.0"; sha256="0m34avcy0zc4xf406jg9wa79vjpl8s5bdn865mh77pb7vy9crx1a"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs signal tuneR zoo]; }; - source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; + soundgen = derive2 { name="soundgen"; version="2.3.0"; sha256="1svjx4v6xi9czay6qby9d7c5wip7nbbq0pgjhscyhjfnhrplsaz7"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs signal tuneR zoo]; }; sourceR = derive2 { name="sourceR"; version="1.1.0"; sha256="09mikl6rkigx2bdnwqsgxwksz40lspq27hsrhlnfyz5yhs31ssda"; depends=[assertthat cluster dplyr gplots gtools R6 Rcpp reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; - sovereign = derive2 { name="sovereign"; version="1.0.0"; sha256="05klxfipakdwdsdqnfglj4jicryxsy6h0h1c2rlnc4f5m72lvwzd"; depends=[broom dplyr ggplot2 gridExtra lmtest lubridate magrittr mclust purrr randomForest sandwich stringr strucchange tidyr xts zoo]; }; + sovereign = derive2 { name="sovereign"; version="1.2.0"; sha256="06maaw366k0pfdmj09rj7l4chv6mynhs67mmr98gfwqhsabhqfxh"; depends=[broom dplyr furrr future ggplot2 gridExtra lmtest lubridate magrittr mclust purrr randomForest sandwich stringr strucchange tidyr xts zoo]; }; sp = derive2 { name="sp"; version="1.4-5"; sha256="1nh9izsnszzm5kbq461w8bi0yh7fqzb74b2zmpg5qis0slbb5vkb"; depends=[lattice]; }; sp23design = derive2 { name="sp23design"; version="0.9"; sha256="1ihvcld19cxflq2h93m9k9yaidhwixvbn46fqqc1p3wxzplmh8bs"; depends=[mvtnorm survival]; }; - spANOVA = derive2 { name="spANOVA"; version="0.99.2"; sha256="0dlx9wwccq67g4yni3gbrv43f5pgm3mg715q2v8f09r1akhfg5by"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; + spANOVA = derive2 { name="spANOVA"; version="0.99.3"; sha256="0w817zwbk6amh3n3j8wzjr15qqhfbk9s23c77b27iwcc5akdgbix"; depends=[ape car DT geoR gtools knitr MASS Matrix multcomp multcompView mvtnorm rmarkdown ScottKnott shiny shinyBS shinycssloaders shinythemes spatialreg spdep xtable]; }; spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; spBFA = derive2 { name="spBFA"; version="1.1"; sha256="1jx1w9ipf8q08vx1w80s4h7nvgl2xqwcj7afci3j78psc6bigazi"; depends=[msm mvtnorm pgdraw Rcpp RcppArmadillo]; }; - spBayes = derive2 { name="spBayes"; version="0.4-3"; sha256="0hllm70dly1niigp9r5645as97phlkba46dp9brcr34080m6w1w9"; depends=[coda Formula magic Matrix sp]; }; + spBayes = derive2 { name="spBayes"; version="0.4-5"; sha256="1qjh7y241v9z5al9nwdsbdqr15cj1prsrppwvbv4m5h285npvnji"; depends=[coda Formula magic Matrix sp]; }; spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.5"; sha256="175n7va1rlnwhjscfj5zvs93b0cx4gmn299pa9cbax71xxjx6l2s"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; spCP = derive2 { name="spCP"; version="1.2"; sha256="0y00k96p96jgp84wbdhqfwsq2fg8c68gc5310rnzpiv3clws27fb"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; - spData = derive2 { name="spData"; version="0.3.8"; sha256="1mlsqy9cbilfc80cbdlbgsngvzdkrd9yjdkxnw2b1gzxnj6jcqbs"; depends=[raster sp]; }; + spData = derive2 { name="spData"; version="0.3.10"; sha256="0c3kg2daz65znnmcaf5l108c88anzlfrsjlnmv2kxqr1lx8z9zl5"; depends=[raster sp]; }; spDates = derive2 { name="spDates"; version="1.0"; sha256="0bf9bwi26h26ms0lczk1dld3cwgnx49y6g56sqwrkagn7w6blsrn"; depends=[data_table dplyr gdistance ggplot2 gstat magrittr raster rcarbon rlang smatr sp viridisLite]; }; spFSR = derive2 { name="spFSR"; version="1.0.0"; sha256="0094plnjlyhnnjqw3i4an5q95bw6hjy1gzc7zr6wy77faivqsbms"; depends=[class ggplot2 mlbench mlr parallelMap tictoc]; }; spGARCH = derive2 { name="spGARCH"; version="0.2.2"; sha256="1wrmk2ybgysvibfy8vvp7pyqda5apqp0jxjfp3hlb416fza52966"; depends=[Matrix nleqslv Rcpp RcppEigen Rsolnp spdep truncnorm]; }; - spMC = derive2 { name="spMC"; version="0.3.10"; sha256="0p0s6w7sif02b91b73a0zb2i4i95a8m86dkqmgx6w1jk9h2mgqaz"; depends=[]; }; + spMC = derive2 { name="spMC"; version="0.3.11"; sha256="06lfc4hk5kn1f1fak0ckpnad0c5b0yxb20cnm0j0hyxpv0qbxhj1"; depends=[]; }; spMaps = derive2 { name="spMaps"; version="0.4.0"; sha256="0n9693aam7gsclfhijq7cy61l0w4mm5vf3rjaz5w0jrz77lrkprh"; depends=[raster rgeos sp]; }; - spNNGP = derive2 { name="spNNGP"; version="0.1.5"; sha256="0mb6aw96p8kwh58lalg8zkm696nrks04irw253m6jr7nf00k4jgp"; depends=[coda Formula RANN]; }; + spNNGP = derive2 { name="spNNGP"; version="0.1.6"; sha256="12ys92r2xpmnhy6hw8sldcz0y28gnxpwnj6sm5jc1lfyz7k1ww6f"; depends=[coda Formula RANN]; }; spNetwork = derive2 { name="spNetwork"; version="0.1.1"; sha256="1dyfsi9q5c7vsdisna4bwm6gqvkq133wl9q227jsh4x429mc0vkv"; depends=[cubature data_table future_apply ggplot2 igraph maptools progressr raster Rcpp RcppArmadillo RcppProgress rgeos SearchTrees sf sp spdep]; }; spTDyn = derive2 { name="spTDyn"; version="2.0.1"; sha256="1wprn2adw4l5pkwkfzdpcr07jxgycx9kaf8w8mfv27nka5hacgqx"; depends=[coda sp spacetime spTimer]; }; spThin = derive2 { name="spThin"; version="0.2.0"; sha256="0j10j1cbbwp3baqm3b59rxlnd643mkx1mirlxpnr1ad2g7xpm69f"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.3.1"; sha256="0lf39n32ifsmbcf35h0g60xniw72mlrzvzax3k6kz5c5k1wszlba"; depends=[coda extraDistr sp spacetime]; }; - spaMM = derive2 { name="spaMM"; version="3.7.34"; sha256="0qpg31fhfxnff26p5gl1gag504fz5agyzqiz1c604c0cb491p6qh"; depends=[boot crayon gmp MASS Matrix minqa nlme nloptr pbapply proxy Rcpp RcppEigen ROI]; }; + spaMM = derive2 { name="spaMM"; version="3.9.0"; sha256="0i6fngwd7znwph0mklirl5lqsnjkrr66wdxxd3jlbrzjqz4bj7iv"; depends=[boot crayon gmp MASS Matrix minqa nlme nloptr pbapply proxy Rcpp RcppEigen ROI]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1.1"; sha256="09dpksbda4lg5hax47a9h9shjmggza6583slvdj0fldblykpyxck"; depends=[]; }; spaceNet = derive2 { name="spaceNet"; version="1.2"; sha256="1s2672icxs0qvdhl52xhllgvh1i9mjfrn5j3icyw6h61ljbnhy11"; depends=[MASS mclust permute RcppTN Rfast sna vegan]; }; spacefillr = derive2 { name="spacefillr"; version="0.2.0"; sha256="1gqwz5j26z7ar3syzgj734mxi77m6mj0jrij32grcls79m8iy329"; depends=[Rcpp]; }; + spacejamr = derive2 { name="spacejamr"; version="0.1.1"; sha256="11mqbzs5px2fcksrf1wbb3vbrcarps45mhdi1i4b1x5fn6xvw60v"; depends=[crsuggest dplyr ggplot2 ggraph ggthemes igraph magrittr sf spatstat_core spatstat_geom]; }; spacesRGB = derive2 { name="spacesRGB"; version="1.3-0"; sha256="1flnvrmq0hdrhxmn5djbhc6fanqhmr1i3q5ik7qcxsb0jvnyincd"; depends=[]; }; spacesXYZ = derive2 { name="spacesXYZ"; version="1.1-1"; sha256="1jxwhpnfbqa2nz86l8sdxxj3qmasw1wmbii7wr8sqp2819jr5lnd"; depends=[]; }; - spacetime = derive2 { name="spacetime"; version="1.2-4"; sha256="0khjq2x0bgmf0l6nrphx4fz9c03b87g5v48qb5myagvagscwq70z"; depends=[intervals lattice sp xts zoo]; }; + spacetime = derive2 { name="spacetime"; version="1.2-5"; sha256="0ii7nwpqi8nq46d7yk5gl7hhnr76f6r6lva7n0pr02kqhqwcqalg"; depends=[intervals lattice sp xts zoo]; }; spacey = derive2 { name="spacey"; version="0.1.1"; sha256="1p8kx3d08q9kz1wb286m3d8ckwkhfm5n42m65m4w5gz5kpfx0xfz"; depends=[httr jsonlite magrittr png raster rayshader rgdal]; }; spacyr = derive2 { name="spacyr"; version="1.2.1"; sha256="1b2ccgwsiqkvp7w37x8k7699c676q16vfrybkrfvyczyhki4s6nw"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.6.0"; sha256="0xigwi6w21y2fwicml0s2gylwnwp2qvrqskr0v8rd3bn01hg9ja3"; depends=[]; }; spagmix = derive2 { name="spagmix"; version="0.3-4"; sha256="032dmz8cx4j5vl229gi1xkncc1wggfrf1a24qqwl2bzxrdfp27rw"; depends=[abind mvtnorm RandomFields sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; - spam = derive2 { name="spam"; version="2.6-0"; sha256="0p5ycvpry955ldrgbbq3syy91wx9425mddpn8r5m9xwlirjxv3v3"; depends=[dotCall64]; }; - spam64 = derive2 { name="spam64"; version="2.6-0"; sha256="17i3s87hj3704al4shbjgp6fvai00xdx44wgfwgrfpbwya47q47n"; depends=[]; }; + spam = derive2 { name="spam"; version="2.7-0"; sha256="03c50wfyrzcmrcv9mkgj8dmdg2cwkh4p4ys8gaclr8w7ym45qav3"; depends=[dotCall64]; }; + spam64 = derive2 { name="spam64"; version="2.7-0"; sha256="0rl74hp4jnahk7fcz39d9q1ccg05ifk2wfahz537nd2jh14mzws7"; depends=[]; }; + spamtree = derive2 { name="spamtree"; version="0.2.1"; sha256="06j0qjhdjgpbad82gq6zgp6vbh6rdpnbpnkj0836lmi1180x7fay"; depends=[dplyr FNN magrittr Rcpp RcppArmadillo rlang tibble]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.4.2"; sha256="15drc11lh0qxpww50p0smi8qxfbln82bx0yd74jqf71irhk5jxyp"; depends=[magrittr xml2]; }; - spant = derive2 { name="spant"; version="1.11.0"; sha256="10mjh23shcg987pgqck440v1j4j2dmkmjdhfjvypxhlsadb8zjnf"; depends=[abind complexplus fields foreach irlba jsonlite magrittr MASS matrixcalc minpack_lm mmand nloptr nnls numDeriv plyr pracma ptw readr RNifti RNiftyReg signal smoother stringr tibble]; }; + spant = derive2 { name="spant"; version="1.14.0"; sha256="1l5n8f1zpw8km03i783qisg2c1mnl300qp74rrmysp8chj04w628"; depends=[abind complexplus fields foreach irlba jsonlite magrittr MASS matrixcalc minpack_lm mmand nloptr nnls numDeriv plyr pracma ptw readr RNifti RNiftyReg signal smoother stringr tibble]; }; sparcl = derive2 { name="sparcl"; version="1.0.4"; sha256="138krflvfdlx4hlh90mswds51i8aw2vv00gm5lgkfsvxj4w324jg"; depends=[]; }; spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.4"; sha256="1s1hd6hvjxnfb3w10v93pggijmm2h4rcsf7ckl34j2sw9bvv7zka"; depends=[sparklyr]; }; sparkavro = derive2 { name="sparkavro"; version="0.3.0"; sha256="0g6ac9msfbx8f8j8rj0hvlxjsn317zyam207q7i8kf0hshs1r58f"; depends=[DBI dplyr sparklyr]; }; sparkbq = derive2 { name="sparkbq"; version="0.1.1"; sha256="0gccm8q5a45k9zm8f90r7fhcmriq8d038p022k7cikbr6rqsrmyh"; depends=[sparklyr]; }; sparkhail = derive2 { name="sparkhail"; version="0.1.1"; sha256="1a9p9i7fs6l9rx5ha6akjjl7qhfak01xsjg28ysv0imikmwp6hy7"; depends=[dplyr sparklyr sparklyr_nested]; }; sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; - sparklyr = derive2 { name="sparklyr"; version="1.6.2"; sha256="0hq547dh31w2m0scxckv98dsysc2aq2krqggqf5kv7a3i4h212yp"; depends=[assertthat base64enc blob config DBI dbplyr digest dplyr ellipsis forge generics globals glue httr jsonlite lifecycle openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi stringr tibble tidyr tidyselect uuid vctrs withr xml2]; }; + sparklyr = derive2 { name="sparklyr"; version="1.7.2"; sha256="0p85cak4mg5ljq3pm1w1j89kshl4x1617q7zcvfbym4i50dfnhfv"; depends=[assertthat base64enc blob config DBI dbplyr digest dplyr ellipsis forge generics globals glue httr jsonlite lifecycle openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi stringr tibble tidyr tidyselect uuid vctrs withr xml2]; }; sparklyr_flint = derive2 { name="sparklyr.flint"; version="0.2.1"; sha256="03dm75nyspnkqhnfmj0w6gliw1b4sfb17mmq5mmzd4a54fbf766j"; depends=[dbplyr dplyr rlang sparklyr]; }; sparklyr_nested = derive2 { name="sparklyr.nested"; version="0.0.3"; sha256="0lva7fbjp253kxq3970h52cr8s52xycbi03d5shsyna8grhkbczj"; depends=[dplyr jsonlite listviewer purrr rlang sparklyr]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; @@ -15720,11 +16360,12 @@ in with self; { sparkwarc = derive2 { name="sparkwarc"; version="0.1.5"; sha256="033clhl3pknjc7yzwa67l2l24sb2n61amc60zbvk2vc61yszl66f"; depends=[DBI Rcpp sparklyr]; }; sparkxgb = derive2 { name="sparkxgb"; version="0.1.1"; sha256="1h7jk76v9wfm8qzqy6lhsmsp767wydwba9xyqszndl88295iac1j"; depends=[forge sparklyr]; }; sparr = derive2 { name="sparr"; version="2.2-15"; sha256="0c0vr4js6rcbyk85sld28m130d5zdymncpipzpkpzis3ismnlgp4"; depends=[doParallel foreach misc3d spatstat spatstat_core spatstat_geom spatstat_utils]; }; - sparrpowR = derive2 { name="sparrpowR"; version="0.2.1"; sha256="1lq6949zvgn1d1hp6smmp6h024pg9ha22k626hv6wrvm1pyskkim"; depends=[doFuture doRNG fields foreach future iterators lifecycle raster sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; + sparrpowR = derive2 { name="sparrpowR"; version="0.2.4"; sha256="1mhsnknknlfh2ixz3wsjmqkn7km02j8ipg80xvpmnjmz1221sv1n"; depends=[doFuture doRNG fields foreach future iterators lifecycle raster sp sparr spatstat spatstat_core spatstat_geom spatstat_linnet]; }; sparseBC = derive2 { name="sparseBC"; version="1.2"; sha256="0a1siyi9kc805qji4alnw3c21spf4iw4wpsbfl50zvs52p8vl8w2"; depends=[fields glasso]; }; sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; }; - sparseFLMM = derive2 { name="sparseFLMM"; version="0.4.0"; sha256="0pwi836y3dgf0fjw72q904ks7xfnj4273891j9z07v1yz47dad1d"; depends=[data_table MASS Matrix mgcv refund]; }; - sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.4"; sha256="1vm853x5vvk745mm68wx0bkimmgwnbrdhj2rwy1nmgpk1lzi8vq6"; depends=[Matrix Rcpp RcppEigen]; }; + sparseFLMM = derive2 { name="sparseFLMM"; version="0.4.1"; sha256="174lnhqig7m6fjfsj114ld059z9mjih3jzm5cq8iscxnhr9m11lr"; depends=[data_table MASS Matrix mgcv refund]; }; + sparseGAM = derive2 { name="sparseGAM"; version="1.0"; sha256="0qqfsgrp0ll11mws0s54g5nsqxwn2j5kbs60q2zrviv6n8bs8xf0"; depends=[grpreg MASS pracma]; }; + sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.5"; sha256="0hmn31pch99aqlqfnmdgsigz3c6zgd8iqdk7fl6svzisrfa0yy0r"; depends=[Matrix Rcpp RcppEigen]; }; sparseIndexTracking = derive2 { name="sparseIndexTracking"; version="0.1.1"; sha256="0bgh29j22jm1yg2jp75xvv9jmqacb66vgv7ygf0xgnrwyrkxkm66"; depends=[]; }; sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; }; sparseLRMatrix = derive2 { name="sparseLRMatrix"; version="0.1.0"; sha256="0b1qczhzbr67k5ayj7avmibyzvfg4jc67mb2m2lvifsf9wrqlqxb"; depends=[Matrix RSpectra]; }; @@ -15735,6 +16376,7 @@ in with self; { sparseSVM = derive2 { name="sparseSVM"; version="1.1-6"; sha256="0b0qiikjyyh9qfd4jl69zqnlp7adxq63mwsxvgwvyc0pv5ccg8i0"; depends=[]; }; sparsebn = derive2 { name="sparsebn"; version="0.1.2"; sha256="1b1601n3nmxck6a27xqxpsa79p4xnz7yyzdfqiddn9zd2b4v9wc5"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.8"; sha256="1x1phd33r3ci72sbm0pkmigwbi4x59pdz8n5919119mkxdf740vs"; depends=[Matrix nnet]; }; + sparsediscrim = derive2 { name="sparsediscrim"; version="0.3.0"; sha256="1fzvki3az1y5bz6d7lygv3hjbzn17gq8g2s7xqmldlpq1v4dhjar"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm rlang]; }; sparseinv = derive2 { name="sparseinv"; version="0.1.3"; sha256="06inzix9m7b5g7c97lyvyl2g7fdr4iz60791hl2w9mah7nd6bfja"; depends=[Matrix Rcpp spam]; }; sparsenet = derive2 { name="sparsenet"; version="1.4"; sha256="1r7xmpn3r8dq1zm6ghygks3l014kqlrpfgsl8q23w7rly8ksw3m9"; depends=[Matrix shape]; }; sparsepca = derive2 { name="sparsepca"; version="0.1.2"; sha256="0wk2nm37p15gb8i4s45izzzdmwywr56kv4g0j3jd5s3slm224vv4"; depends=[rsvd]; }; @@ -15745,56 +16387,57 @@ in with self; { sparsevar = derive2 { name="sparsevar"; version="0.1.0"; sha256="1kcy6bm04mccky529nryy5l001bv71hx304ysiabl4myakw0rwy7"; depends=[corpcor doParallel ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; sparsevb = derive2 { name="sparsevb"; version="0.1.0"; sha256="1cigq8hwymrrkiy3iyrxsjjbj228ahrd7mq9lqar4jlb925jzqx4"; depends=[glmnet Rcpp RcppArmadillo RcppEnsmallen selectiveInference]; }; sparsio = derive2 { name="sparsio"; version="1.0.1"; sha256="181kzs9x3h497c7shfalbzrjz05bkj7mmjh9nyphxyi2jjrr6y1q"; depends=[Matrix Rcpp]; }; - sparta = derive2 { name="sparta"; version="0.7.3"; sha256="172fmwddawm15r5w4k9jv16dzzw3gvjgxn7f5ihvdcgh3qj2flns"; depends=[Rcpp RcppArmadillo]; }; + sparta = derive2 { name="sparta"; version="0.8.1"; sha256="1icazgx6v1c5zwi7zs2a7294pvcw32gmqrk08dxz38wvny0j6bv3"; depends=[Rcpp RcppArmadillo]; }; spass = derive2 { name="spass"; version="1.3"; sha256="1c148z0i3d185hnf54xmgppjrblv3b2s3sm0lmj78gvav04mj5s4"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; - spatPomp = derive2 { name="spatPomp"; version="0.21.0.0"; sha256="1msrf8kdcdr96xhl6byz20ldgy0k98pac8wvia0wmjf6404z91ln"; depends=[abind doParallel dplyr foreach ggplot2 magrittr pomp rlang stringr tidyr]; }; + spatPomp = derive2 { name="spatPomp"; version="0.28.0.0"; sha256="0yql6llgclynd2nv1y4sm1a6lsc87003bqbq9skh3lgvdgbg5qsr"; depends=[abind dplyr foreach ggplot2 magrittr pomp rlang stringr tidyr]; }; spate = derive2 { name="spate"; version="1.7"; sha256="1cr5jjrycfj9larsqgzfakk4qgfz8m5djg4ddzk6s3lg2iw06y43"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.2-2"; sha256="09bbcqgmbg6a65mnxivr4pghsanj22x1j0l4hq8bzpwgbas7byhy"; depends=[Matrix Rcpp]; }; spathial = derive2 { name="spathial"; version="0.1.2"; sha256="1vwzcwpmx8kwv821vjf940qd5am3k0shf1s14jva71mgxs70ddmb"; depends=[class igraph irlba knitr MASS matrixStats pracma rmarkdown Rtsne]; }; spatial = derive2 { name="spatial"; version="7.3-14"; sha256="0dlafq744mahxpb13llmsrg54fzww8ld1nbxmr7m851gff11kk2j"; depends=[]; }; - spatialClust = derive2 { name="spatialClust"; version="1.1.1"; sha256="042yrmh1rb0hxynxlbdpcissgy9zazs5aqx7vj388ibynzijck3r"; depends=[ggplot2 maptools rgeos sp]; }; spatialCovariance = derive2 { name="spatialCovariance"; version="0.6-9"; sha256="1m86s9a059spp97y37dcirrgjshcqzpdj11cq92vji624w4nrhlb"; depends=[]; }; - spatialEco = derive2 { name="spatialEco"; version="1.3-6"; sha256="08sddjh03hqsyiwk7hh1rhbcm1y05gb0vla2bcfh8bd355qvffx5"; depends=[MASS raster rgeos sf sp spatstat_core spatstat_geom spdep]; }; - spatialfusion = derive2 { name="spatialfusion"; version="0.6-2"; sha256="1vqv4424m8rnmyg463mvnk26q7dis4wd47swyyc8f8r4qd85agnz"; depends=[fields Rcpp rstan SDraw sp]; }; + spatialEco = derive2 { name="spatialEco"; version="1.3-7"; sha256="0yhv4amqwbmcx6anzyrsmlrk25ishdlwyigyw9snd9d2v5k88s1q"; depends=[MASS raster rgeos sf sp spatstat_core spatstat_geom spdep]; }; + spatialRF = derive2 { name="spatialRF"; version="1.1.3"; sha256="1ganbsp7krazl90mdlq23g227ixmxpk4yzxl47rayd431vg6fys1"; depends=[doParallel dplyr foreach ggplot2 huxtable magrittr patchwork ranger rlang tibble tidyr tidyselect viridis]; }; + spatialTIME = derive2 { name="spatialTIME"; version="1.2.0"; sha256="0pmpk2kfh53gfzw33ncr1pjzyh7zprkdwgxqgajvd8y2wb90a462"; depends=[crayon dplyr furrr future ggplot2 ggpubr magrittr pheatmap plyr purrr RColorBrewer rlang rlist scales spatstat_core spatstat_geom tidyr tidyselect viridis]; }; + spatialfusion = derive2 { name="spatialfusion"; version="0.6-3"; sha256="1p15bgh86xdq1p3jpvz0qkkc7c9n2i998brpyjzfx8ikj5msd4pf"; depends=[fields Rcpp rstan SDraw sp]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; spatialreg = derive2 { name="spatialreg"; version="1.1-8"; sha256="045fn7zib7asimj43bs9b9mr2fy1fpa31a077bxbqn4729hrdxs2"; depends=[boot coda expm gmodels LearnBayes MASS Matrix nlme spData spdep]; }; - spatialrisk = derive2 { name="spatialrisk"; version="0.6.7"; sha256="1vd90v55wy7b1aqhlr2b6x445nwghn94qyz39439pcmp5y9n8zb8"; depends=[automap classInt dplyr fs ggplot2 gstat lubridate mgcv Rcpp RcppProgress sf sp tmap viridis vroom]; }; + spatialrisk = derive2 { name="spatialrisk"; version="0.6.9"; sha256="06crwxc6bb1r5hypjiikyv71h62ka59bmbw9h32kgm4ks6f8g361"; depends=[classInt colourvalues data_table dplyr fs GenSA geohashTools ggplot2 leafem leafgl leaflet lubridate Rcpp RcppProgress sf tmap units viridis]; }; spatialsample = derive2 { name="spatialsample"; version="0.1.0"; sha256="0w57pl09pamx8mmrwyj2hixxqp9cf0xg06gvsrrg4abjbkj0i1pr"; depends=[dplyr purrr rlang rsample tibble tidyselect vctrs]; }; - spatialwarnings = derive2 { name="spatialwarnings"; version="2.0.0"; sha256="02dd4xyl3n6mfl201cmi0n2mq9j3p7mf0nn67nm6nnvgmkrpgxhg"; depends=[future future_apply ggplot2 gsl plyr Rcpp RcppArmadillo tidyr]; }; + spatialwarnings = derive2 { name="spatialwarnings"; version="3.0.0"; sha256="1m6dbfngnbzqlbdvm1qvlb743zypf4cqczihdhbhny9mfgmwds5i"; depends=[future future_apply ggplot2 gsl plyr Rcpp RcppArmadillo segmented]; }; spatialwidget = derive2 { name="spatialwidget"; version="0.2.3"; sha256="0j0v0cyqndlg9p7g03gp1br9b2i3p50abzpw67k3cawm96a87crj"; depends=[BH colourvalues geojsonsf geometries jsonify rapidjsonr Rcpp sfheaders]; }; spatsoc = derive2 { name="spatsoc"; version="0.1.16"; sha256="1pyw6606kwskgcfnzvgzvy8n4i9s3mmn1789d1lhk04h14r33fns"; depends=[adehabitatHR data_table igraph rgeos sp]; }; - spatstat = derive2 { name="spatstat"; version="2.1-0"; sha256="0vr5md53247v6crvjvg9m82vc6h914zzvkzfkga8x79hv35ii4as"; depends=[spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_utils]; }; + spatstat = derive2 { name="spatstat"; version="2.2-0"; sha256="0lz3sidn05xjswxaxhagal6jj5hra6aya0azxybjw7mgspl903wg"; depends=[spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_utils]; }; spatstat_Knet = derive2 { name="spatstat.Knet"; version="2.0-0"; sha256="1w9ag7v18mvy4dl1gz2w8xjhw9n2sf9zycqz3mraajis831c76ix"; depends=[Matrix spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_sparse spatstat_utils]; }; - spatstat_core = derive2 { name="spatstat.core"; version="2.1-2"; sha256="0l0x461m8v93b15ywwb39mmy86qb8nsmas075x5lrzf9c31zdyns"; depends=[abind goftest Matrix mgcv nlme rpart spatstat_data spatstat_geom spatstat_sparse spatstat_utils tensor]; }; + spatstat_core = derive2 { name="spatstat.core"; version="2.3-0"; sha256="1j962lzllqzxkd57j6immyj94pc53ff9mlvw1iscw7cnn9nyr5ap"; depends=[abind goftest Matrix mgcv nlme rpart spatstat_data spatstat_geom spatstat_sparse spatstat_utils tensor]; }; spatstat_data = derive2 { name="spatstat.data"; version="2.1-0"; sha256="0csmz5vjaxnznkbsfah8qd3v8p0y56jvis01ialxzvf71snl160v"; depends=[Matrix spatstat_utils]; }; - spatstat_geom = derive2 { name="spatstat.geom"; version="2.1-0"; sha256="0f7rc35d8qyldf471iarbyxddwc7931g2bcbqyrz76rhgvwbdp2m"; depends=[deldir polyclip spatstat_data spatstat_utils]; }; + spatstat_geom = derive2 { name="spatstat.geom"; version="2.2-2"; sha256="0rx28g064641yrk2h23qpyc0bgs20lpsnqmyl1d06530ga6r1qc3"; depends=[deldir polyclip spatstat_data spatstat_utils]; }; spatstat_gui = derive2 { name="spatstat.gui"; version="2.0-0"; sha256="0v26pmi6ir38hsfhkmkz7njf8b12y8dgacqz54vy9giq73k71j14"; depends=[rpanel spatstat_core spatstat_data spatstat_geom spatstat_linnet spatstat_utils]; }; - spatstat_linnet = derive2 { name="spatstat.linnet"; version="2.1-1"; sha256="1ia0qgggddiwhhyd3q516f3p6by0p4xnq26wqz7410n2ja60bbb4"; depends=[Matrix spatstat_core spatstat_data spatstat_geom spatstat_utils]; }; + spatstat_linnet = derive2 { name="spatstat.linnet"; version="2.3-0"; sha256="1yd2z629f7908xw9kyqiahk3qn9ajpl6qffbkv887zmq3p28kh7h"; depends=[Matrix spatstat_core spatstat_data spatstat_geom spatstat_sparse spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="4.1-1"; sha256="185ypf91d5faybm6ixiz419wsip2swsg3vsbbw3z4w1kqrj7m884"; depends=[spatstat_core spatstat_data spatstat_geom spatstat_sparse spatstat_utils tensor]; }; spatstat_sparse = derive2 { name="spatstat.sparse"; version="2.0-0"; sha256="1iqrpazb88s4w208adf2qgm4ajwz3kwqck65k9g5l28zw9jcxyr7"; depends=[abind Matrix spatstat_utils tensor]; }; - spatstat_utils = derive2 { name="spatstat.utils"; version="2.1-0"; sha256="18gqsc1a85pk69aifi10wprv1c0lci3zxp4wqjb27dlmlbz6jdgd"; depends=[]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="2.2-0"; sha256="1aypccpv0zavxwmqzvlka8981n9km7ml3jbmxz21sql58997xn2s"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.6"; sha256="02bq3hvvjfxndskd5yrchq0r9dv7mxplzq3pvs3jrsd35sfcns3w"; depends=[fields iterators lubridate Matrix RandomFields raster RColorBrewer rgeos sp spatstat spatstat_core spatstat_geom stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.5.5"; sha256="0yfkz28nfvl3rm0bxljb3y19zhnx7pabxy81d835pbfmjq5vvp51"; depends=[dplyr rlang sp tibble]; }; spc = derive2 { name="spc"; version="0.6.5"; sha256="1s9f67m3a52mzk5s6hh9jv80m721s0z43x2qj2d4ski2jwqw0iyr"; depends=[]; }; - spc4sts = derive2 { name="spc4sts"; version="0.5.2"; sha256="039z6dnry5c2brmh7jsnb6cvb7a8nig1rrf4d4i5bpifi2x1hf06"; depends=[gridExtra LS2Wstat rpart]; }; + spc4sts = derive2 { name="spc4sts"; version="0.5.4"; sha256="17pn6hn5x3isyn44xzvvwby2jiapa4gid0y4kirkcvxf6n7rdhjx"; depends=[gridExtra LS2Wstat rpart]; }; spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; - spdep = derive2 { name="spdep"; version="1.1-7"; sha256="0sg417d95paww625663lgmk6jwhs88djqzc96gbs1hxazlf77qb1"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sf sp spData]; }; + spdep = derive2 { name="spdep"; version="1.1-11"; sha256="1ym523dzpiji6c8ypa3gvw8va36gl1gnzcsvdg9drly3mlq42rpr"; depends=[boot coda deldir e1071 expm gmodels LearnBayes MASS Matrix nlme s2 sf sp spData units]; }; spdownscale = derive2 { name="spdownscale"; version="0.1.0"; sha256="0pl560km9629iwy13h7359ab7ixzs09hg986kvk0xbnc348srb86"; depends=[]; }; spdplyr = derive2 { name="spdplyr"; version="0.4.0"; sha256="0lijp78wgrky103137vfk3k4s051qppd6jq6s065k9i7y1azbpc1"; depends=[dplyr rlang sp spbabel tibble]; }; spduration = derive2 { name="spduration"; version="0.17.1"; sha256="1hsz4hcw85f1rj2pd8ppzsd1r8fh4yf6axc11yf2hd287ghzzxzy"; depends=[corpcor forecast MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; spdynmod = derive2 { name="spdynmod"; version="1.1.5"; sha256="1qxpvjqvfcjsy3z0naz438aa95v2d3imdfxj20vfb2zwpv9l3215"; depends=[animation deSolve raster sp]; }; spe = derive2 { name="spe"; version="1.1.2"; sha256="0xyx42n3gcsgqmy80nc9la6p6gq07anpzx0afwffyx9fv20fvys0"; depends=[]; }; - speakr = derive2 { name="speakr"; version="3.1.1"; sha256="0dwa50knrwci7lggl99615prfvyjrbqqs0bx3nsgd1zh0ap530cp"; depends=[ggplot2 lifecycle readr stringr tibble]; }; + speakr = derive2 { name="speakr"; version="3.2.0"; sha256="12m7f4m0jglnbv7i9ackmymh7jc90vjg6yr6ns08b8qcqmzmf9if"; depends=[ggplot2 lifecycle readr stringr tibble]; }; speaq = derive2 { name="speaq"; version="2.6.1"; sha256="15v7lr2mczqc5ma2n9gyszfkyljnsds6c8lc5vy0qkvwfl01sv3v"; depends=[cluster data_table doSNOW foreach ggplot2 gridExtra impute MassSpecWavelet missForest mQTL reshape2 Rfast rvest xml2]; }; spearmanCI = derive2 { name="spearmanCI"; version="1.0"; sha256="1xi51dphv91j5hgrd25sqs1li0g24cwpa1k162arw5b0qfl04f17"; depends=[emplik MASS]; }; spec = derive2 { name="spec"; version="0.1.7"; sha256="0zgs9yki11wysvjnx88gl8iv0mcsbrasg29sbasp0855x5l8cg8k"; depends=[csv encode magrittr]; }; speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; specklestar = derive2 { name="specklestar"; version="0.0.1.7"; sha256="04vm989yi31vqnf5rs6cdyikm4jzfd9njxh0ls3dvjrg19ipsnmn"; depends=[Rcpp]; }; - specmine = derive2 { name="specmine"; version="3.1.4"; sha256="1vw5zxwhz67323lxb6l7hjiw3qmd0g862azizdazh8lhkriin9rm"; depends=[baseline caret compare e1071 ellipse genefilter GGally ggplot2 impute imputeTS MASS Metrics mrbin narray pcaPP plotly pls RColorBrewer readJDX speaq specmine_datasets]; }; + specmine = derive2 { name="specmine"; version="3.1.6"; sha256="0ik3nsb9mrja6709fwsf97f9qbf7lmmyc2zqrm7398h3mibf64l7"; depends=[baseline caret compare e1071 ellipse genefilter GGally ggplot2 impute imputeTS MASS Metrics mrbin narray pcaPP plotly pls RColorBrewer readJDX speaq specmine_datasets]; }; specmine_datasets = derive2 { name="specmine.datasets"; version="0.0.2"; sha256="0amqb4qy5ac1jc4g95sf4678ll3xhscyrcxq6pgh8imfyk1ifrmx"; depends=[xcms]; }; specr = derive2 { name="specr"; version="0.2.1"; sha256="17bc7f644g40zsfxv3sw542piqgg09w3m3q14jgrifc8sw0ljvdf"; depends=[broom cowplot dplyr ggplot2 ggraph glue igraph lme4 magrittr purrr rlang tibble tidyr]; }; specs = derive2 { name="specs"; version="0.1.1"; sha256="0x5s7aikj5x1dgxygizh2mcni74hy6dm7084h1pqqbh5ans00c6n"; depends=[Rcpp RcppArmadillo]; }; @@ -15803,9 +16446,10 @@ in with self; { spectralAnalysis = derive2 { name="spectralAnalysis"; version="3.12.0"; sha256="0mz01hx86qi65k6vzz9k1j9q7gi10dh14cqvrlfy93f3kmi52q0x"; depends=[baseline BiocGenerics data_table ggplot2 hNMF jsonlite magrittr NMF nnls plotly plyr RColorBrewer signal viridis]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; spectralGraphTopology = derive2 { name="spectralGraphTopology"; version="0.2.0"; sha256="02j374zsz4ba8ldy52x43rih1p77b56cv5xlbycj5wmkzny2gzx1"; depends=[MASS Matrix progress Rcpp RcppArmadillo RcppEigen rlist]; }; - spectrolab = derive2 { name="spectrolab"; version="0.0.10"; sha256="1hmz5a5x8xf2xw6qz6h21gzyswi0al4bnpygxf0rhg4i9wpfch9j"; depends=[prospectr RColorBrewer shiny shinyjs]; }; + spectre = derive2 { name="spectre"; version="1.0.2"; sha256="1n5z7970pzhavdf7qhxsb7gzz8dsrwa1pwyxf8n6sxvmdbk8v2z1"; depends=[ggplot2 Rcpp RcppProgress testthat]; }; + spectrolab = derive2 { name="spectrolab"; version="0.0.15"; sha256="04vcgxf8z4vji5yybnrhwyfz57idbyhknln9sqpp704ylj2mvks5"; depends=[RColorBrewer shiny shinyjs]; }; sped = derive2 { name="sped"; version="0.2-1"; sha256="05igpk8szdcs6kjhpmd9dmjvqdg199pz3hi0rwkhdjglxivvjzjn"; depends=[pooh]; }; - speech = derive2 { name="speech"; version="0.1.0"; sha256="007s32w8qr45x1n40xdh85a329cgmm3809bi62ghnxzfny9vjb07"; depends=[dplyr lubridate magrittr pdftools purrr stringr tabulizer tibble tidyr tm]; }; + speech = derive2 { name="speech"; version="0.1.3"; sha256="0ff66fc6pvlvwy6n7dp5jkzjbbgc43rwbnk5khq7xbq9zfpfcjgj"; depends=[dplyr lubridate magrittr pdftools purrr rvest stringr tabulizer tibble tidyr tm]; }; speedglm = derive2 { name="speedglm"; version="0.3-3"; sha256="0f37w4lj8dpcg1sfkd7cv6qpdkanmb97mnd8zih2fxzv8bpd0rfh"; depends=[MASS Matrix]; }; spef = derive2 { name="spef"; version="1.0.9"; sha256="115lmv2a21ws1mj22v1fbk72mqn3siqmw3frbg4nci96lnyr7qh6"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; }; @@ -15816,7 +16460,8 @@ in with self; { sperrorest = derive2 { name="sperrorest"; version="3.0.2"; sha256="195bdg8fd619z0i8jw1rm1zm2qcdq7hb2h5ynq1lf3a2j0y3fdpl"; depends=[future future_apply ROCR stringr]; }; spex = derive2 { name="spex"; version="0.7.1"; sha256="0lsmh1sywd4si0v10aix44hybwph3gan8w8cxz956dcgkz60p41v"; depends=[crsmeta quadmesh raster reproj sp]; }; spfda = derive2 { name="spfda"; version="0.9.0"; sha256="156vs1f75x0wbf65fwzkhlbda649sryf58xixi7gbfjzn873w111"; depends=[mathjaxr]; }; - spfilteR = derive2 { name="spfilteR"; version="1.0.0"; sha256="0pldarr2kdf7fkkdpmpx5azqzgfwzqbd6qb4fg7xjsj78bza6fif"; depends=[]; }; + spfilteR = derive2 { name="spfilteR"; version="1.1.0"; sha256="00pkcjpy3zmar4znwpa13zbzzz3w8yh3ad1z3jmdqy8ai691zkb4"; depends=[]; }; + spflow = derive2 { name="spflow"; version="0.1.0"; sha256="0a5nirccwcc2z4dn3gxdlhdjz7sxv1r23clawy0kwn4ggdkmphp1"; depends=[coda Matrix Rdpack RSpectra]; }; spfrontier = derive2 { name="spfrontier"; version="0.2.5"; sha256="1vnvwcjbhvbmyn5rp4760amzy8k3y156q629fjymw9rw6zy45pbf"; depends=[ezsim moments mvtnorm numDeriv optimx spdep tmvtnorm]; }; spftir = derive2 { name="spftir"; version="0.1.0"; sha256="07vw8igy698jx671cj6hmf6ll9xvaq81fb6la7j95pqbd6jl284z"; depends=[pracma]; }; spgrass6 = derive2 { name="spgrass6"; version="0.8-9"; sha256="05xvdhisad0d7c69mvahzg6pvgvmb6dph50r34981palykic7qhn"; depends=[sp XML]; }; @@ -15825,10 +16470,11 @@ in with self; { spherepc = derive2 { name="spherepc"; version="0.1.4"; sha256="0jyaanwb78gv3cb1ig86h8cjaw35pxwx7hq53kc9iwjfhkrmc2j3"; depends=[geosphere rgl sphereplot]; }; sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.7"; sha256="0savvqz3v5awsr7kcghg6yzkqdpm01kwp7jrg9ajfb3146gg8mlq"; depends=[Matrix nlme sp spdep]; }; + sphunif = derive2 { name="sphunif"; version="1.0.1"; sha256="0846k5jcnkxgkz3jz1ip06ni1981z658sswjqr46hiy35jrk6z53"; depends=[doFuture foreach future gsl Rcpp RcppArmadillo rotasym]; }; spiR = derive2 { name="spiR"; version="0.2.1"; sha256="0v3304d0ar6344377m6zd4p6f9m8ibq37i5ys4lnxnw41lhjx1x2"; depends=[dplyr ggplot2 ggsci gsheet lubridate readr reshape2]; }; spidR = derive2 { name="spidR"; version="1.0.1"; sha256="06499ivmxxic673y0j9i841xnffqnv4nlsfircqd09aixn8d90w7"; depends=[httr jsonlite rgbif rworldmap rworldxtra]; }; spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; - spiderbar = derive2 { name="spiderbar"; version="0.2.3"; sha256="0sjwaar052502zbkdlyrr2l117n1gkigq9r44dfb3jncsq7pkpa7"; depends=[Rcpp]; }; + spiderbar = derive2 { name="spiderbar"; version="0.2.4"; sha256="0lk080s3xksrskc48nckpml74gvs6n7jjr4jgm15jhwp0izjs5y7"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-15"; sha256="1kg1vqx9zvn8jqh8ygjifpyd00npqz3ljbs7r3zgh28bclhfywai"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; @@ -15837,76 +16483,86 @@ in with self; { spind = derive2 { name="spind"; version="2.2.1"; sha256="1yasqy086h4dv348krisc024mic0dvdsncqys95l85924djlfipp"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje rlang splancs stringr waveslim]; }; spinifex = derive2 { name="spinifex"; version="0.2.8"; sha256="0zb10rnywycy93xvc9awprq4rq023lgnx5fkh47zqjcf7i5jhxx5"; depends=[gganimate ggplot2 plotly Rdimtools shiny tourr]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; + spiralize = derive2 { name="spiralize"; version="1.0.2"; sha256="0hdfirgsrdmnc694xdqbap3i6k36yn8c4gv9cn1yl4hiijv2p0nl"; depends=[circlize ComplexHeatmap GetoptLong GlobalOptions lubridate]; }; spiritR = derive2 { name="spiritR"; version="0.1.1"; sha256="1fjr63rl9hwqxzgm4lkb9v74cxxpi4lrlcgjixdm7zgccm8ihdvh"; depends=[httr magrittr xml2]; }; splancs = derive2 { name="splancs"; version="2.01-42"; sha256="1aph5rns5kzad1vc6y7khs3y8ysf51fgssmskmi0pqi18mvg82lc"; depends=[sp]; }; + splash = derive2 { name="splash"; version="1.0.1"; sha256="0f5ap8gi1nqxq8qbi3dz52hlizln1wxfrx5k06bagvxh8za8a08v"; depends=[]; }; splashr = derive2 { name="splashr"; version="0.6.0"; sha256="0l57w5gwr0p2049z1201nlqsy23h37gsybd1lj3vycxz43ir7213"; depends=[curl dplyr formatR HARtools httr jsonlite lubridate magick openssl purrr scales stevedore stringi xml2]; }; - splines2 = derive2 { name="splines2"; version="0.4.3"; sha256="1wjfj16dasjrla21f3jpbbvnvf1hac2zkvp75wh0xgkm1nq3pl4i"; depends=[Rcpp RcppArmadillo]; }; + splines2 = derive2 { name="splines2"; version="0.4.5"; sha256="0vgwgrkrkl2j6pcr98gylm3q60aiqdj9n9ndpj6szzn3ygjr0j9q"; depends=[Rcpp RcppArmadillo]; }; splinetree = derive2 { name="splinetree"; version="0.2.0"; sha256="0gqb3kwca42crrx6fj42ryl5pkxvankhp1chdlvi5lgg8mzmqsnl"; depends=[ggplot2 mclust mosaic nlme rpart treeClust]; }; splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; splitSelect = derive2 { name="splitSelect"; version="1.0.1"; sha256="0pkiarjwjw8s3rspj2910lwrcy71qjx1i2fp1q98k05b39v8m5da"; depends=[caret doParallel foreach glmnet multicool]; }; splitTools = derive2 { name="splitTools"; version="0.3.1"; sha256="015vk8awxfc3zmcm3h51b6fy7si31g8w7mg4ig5fvpgsnm97h7rw"; depends=[]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.2"; sha256="0cf9y68m72j890a732m0n784nr12ydljr6s8i80f0in6q8lmw8ls"; depends=[lbfgs]; }; splithalf = derive2 { name="splithalf"; version="0.7.2"; sha256="1b66dssjjs3j7wvjx12ql1iavfllh366cb5kbf5scxg882zjdi0l"; depends=[dplyr ggplot2 patchwork plyr Rcpp robustbase tidyr]; }; - splithalfr = derive2 { name="splithalfr"; version="2.1.0"; sha256="1dk85p2b6yxf9n5abn00zv5zvcgwhz20zyls5vg80jfg9xkr4ar6"; depends=[bcaboot dplyr psych rlang tibble]; }; + splithalfr = derive2 { name="splithalfr"; version="2.1.1"; sha256="018dqxgwqp3lrlnzkdrc6pkr3341bdklavh2mz38hqfimpirmg4z"; depends=[bcaboot dplyr psych rlang tibble]; }; splitstackshape = derive2 { name="splitstackshape"; version="1.4.8"; sha256="0mpyf2kkfdl69pdc6brl1r6101vyc6pgr7z17s55ppg3y71k4q35"; depends=[data_table]; }; splm = derive2 { name="splm"; version="1.4-11"; sha256="15app94mxs6xlmqqhpa0q041skc4n4l2wfi6pmmhwinrgcqgncln"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; - splmm = derive2 { name="splmm"; version="1.1.2"; sha256="1ch9nm6h2l4s90dz0a8j6w77i1di5sf0glwayi84nanxad9q09i2"; depends=[emulator ggplot2 gridExtra MASS miscTools penalized plot3D Rcpp RcppArmadillo]; }; + splmm = derive2 { name="splmm"; version="1.1.3"; sha256="0z04arwzy5169f6bhc8cbdc07zcmd5safpii5a3g7bqallmzipnr"; depends=[emulator ggplot2 gridExtra MASS miscTools penalized plot3D Rcpp RcppArmadillo]; }; splot = derive2 { name="splot"; version="0.5.1"; sha256="0m2cx5rrwfyznzn12z9xkyrs9i6qkwyyymbk3z28gjxw31kszlc9"; depends=[]; }; spls = derive2 { name="spls"; version="2.2-3"; sha256="0bmb0ai5z80njhypd342i711x0bdkwcvlyn374lyyzj8h3d97mmv"; depends=[MASS nnet pls]; }; splus2R = derive2 { name="splus2R"; version="1.3-3"; sha256="035zd22zcpkh74rik9ws6g8al6vjz7jgrqs5si361bzb5n290p3x"; depends=[]; }; splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.2"; sha256="06r2px2nsqyvjb1r1gz6wwjyr6rmfzslyxng8ng2n7hwr9ga1kc8"; depends=[]; }; splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.2"; sha256="0z064svaggqajqv8bni4763llkhm2s3s45krvs4w8k8all0h7rxa"; depends=[splusTimeDate]; }; - spm = derive2 { name="spm"; version="1.2.0"; sha256="0kn3ahhvpcr0qpsqid4d7rx613a9dpdw2x4zgrnmsimmw026q7xn"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; + spm = derive2 { name="spm"; version="1.2.1"; sha256="0gr6dc5xcz4y84iibkfi3gi84yij5vvazi1yrwd54jblf3fx32jr"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; spm12r = derive2 { name="spm12r"; version="2.8.3"; sha256="04bv4x7p2vv9n8zi5axpkcj13h6q08lc6qyd1czvxrpdmzsp40yb"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; - spmoran = derive2 { name="spmoran"; version="0.2.1"; sha256="04vk127bkvnfgk1ana58f88qiib3b4h6zdpsl3wqr3i8qsv0dapj"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK RColorBrewer sp spdep vegan]; }; + spmoran = derive2 { name="spmoran"; version="0.2.2"; sha256="0qympyy5qwcxxpi3ygvsac8wnzw83c3pjiq1hqj1zd7immx2wp9a"; depends=[doParallel fields FNN foreach ggplot2 Matrix rARPACK RColorBrewer sp spdep vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spnn = derive2 { name="spnn"; version="1.2.1"; sha256="1yj89j7nynfyw1ikm6q5kdwdgiiwxx0aa6kgnri5wfnb4l0356l7"; depends=[MASS Rcpp RcppArmadillo]; }; spocc = derive2 { name="spocc"; version="1.2.0"; sha256="114xlwd9200ysgkcwxgjc5awj50j4k4v1lgbdjzs7gv9bvdlbb2b"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble wellknown whisker]; }; + spoiler = derive2 { name="spoiler"; version="1.0.0"; sha256="105shgv62x3qjw4477qfi79h9bdih4n8hg6wn842dyfq940wkr5b"; depends=[htmltools shiny]; }; spongebob = derive2 { name="spongebob"; version="0.4.0"; sha256="1ar5173fwx1am5rgjlnczfla6b49g0azl0h9vn89ipw7f71rr5j7"; depends=[]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; - spork = derive2 { name="spork"; version="0.1.8"; sha256="1122fqq0nppxjjfjln7cr6ybrvg38rw6y4rc6vngrqjs5302rynl"; depends=[ggplot2 latexpdf png]; }; + spork = derive2 { name="spork"; version="0.2.1"; sha256="02m9qnwff5gj3p7bmcv56b99y55qhz3a9whknvqvm9f4dz24k9y6"; depends=[ggplot2 latexpdf png]; }; sporm = derive2 { name="sporm"; version="1.1.1"; sha256="1bj795kmzjjcwvnrwg7dfz4jbfj488iydm0s79wrsgdq4chrrgyb"; depends=[]; }; sport = derive2 { name="sport"; version="0.2.0"; sha256="1wb28iaa35naf5aczijb5g0l41yf098f7c20mjmkcd5w04l1mmks"; depends=[data_table ggplot2 Rcpp]; }; sportyR = derive2 { name="sportyR"; version="1.0.1"; sha256="03l5zyqdrzji58acq5mmczz7nx9yk29hf5dzagpgb8fraq1vvddi"; depends=[dplyr ggplot2 glue]; }; spotGUI = derive2 { name="spotGUI"; version="0.2.3"; sha256="0hybpw0lgqrzrryfp08qvl42hrgdmx2hq7bavxjihm8mp0375dmz"; depends=[batchtools gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyFiles shinyjs smoof SPOT XML]; }; spotidy = derive2 { name="spotidy"; version="0.1.0"; sha256="0hg8d3piiwp4q3257qsv5l41zc3c5a8mbq595ci63id8fc2q2pkd"; depends=[dplyr httr magrittr purrr]; }; + spotifyr = derive2 { name="spotifyr"; version="2.2.1"; sha256="0yj00sn73jl741c6ma68cxm1i6gv5s9xnj0k07c90mhhb6sxfq9y"; depends=[assertthat dplyr genius ggridges httr janitor jsonlite lubridate magrittr purrr readr rlang rvest stringr tibble tidyr xml2]; }; spotoroo = derive2 { name="spotoroo"; version="0.1.1"; sha256="0xh7fxkry63fm83vfc2njjzp4r6gb5b2242ima8q75mrvjc5biax"; depends=[cli dplyr geodist ggbeeswarm ggExtra ggplot2 ggrepel patchwork progress]; }; spp = derive2 { name="spp"; version="1.16.0"; sha256="08zxxgyp0h6733b08jmml7k4rhfd3mi5dda3jrzid0s184y0z29w"; depends=[BH caTools Rcpp Rsamtools]; }; spray = derive2 { name="spray"; version="1.0-11"; sha256="0zg7rhsxbbrbvjv4azkyl9fd5kgh0a5xnkr9lnaqiss8z109jl6v"; depends=[magic mathjaxr partitions Rcpp]; }; - spreadr = derive2 { name="spreadr"; version="0.1.0"; sha256="1azf1543ijlgmry0f2sxivpy4hk9mcwnn5kqggzwwzwla2ql3lhj"; depends=[extrafont ggplot2 igraph Rcpp]; }; + spreadr = derive2 { name="spreadr"; version="0.2.0"; sha256="180dvr39i1glc0jllsnnglwrxh133q20v7px2fmdi7229pr175id"; depends=[assertthat extrafont ggplot2 igraph Matrix Rcpp]; }; + spreval = derive2 { name="spreval"; version="1.0.0"; sha256="0949ms3d2r94vbsqyfma4vfavf0gdq58xs7nkirgrfxjd1a65vfm"; depends=[interp timeDate]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; - springer = derive2 { name="springer"; version="0.1.2"; sha256="0zzc8fmqjm6pjsfg4sxjzdal9yrs43l5kp1fbkyqrsvxpm6p8hki"; depends=[MASS Rcpp RcppArmadillo]; }; + springer = derive2 { name="springer"; version="0.1.5"; sha256="197zmn90zrqv9g0kzwnzs14g1sh3cx2hnp5x92dfp96xcb650dz1"; depends=[MASS Rcpp RcppArmadillo]; }; sprintr = derive2 { name="sprintr"; version="0.9.0"; sha256="0nnzjn7zrcgcmk3rs0hn56jcjrzrn5z0kc77bv4zzvbz5vr8gbwj"; depends=[glmnet Rcpp RcppArmadillo]; }; sprm = derive2 { name="sprm"; version="1.2.2"; sha256="0iyijkjnyz4yx2cmazlnhkk0f5ls0c2q2aikwlzl13w6zbj040a8"; depends=[cvTools ggplot2 pcaPP reshape2 robustbase]; }; sprsmdl = derive2 { name="sprsmdl"; version="0.1-0"; sha256="09klwsjp5w6p7dkn5ddmqp7m9a3zcmpr9vhcf00ynwyp1w7d26gi"; depends=[]; }; - spsComps = derive2 { name="spsComps"; version="0.2"; sha256="1gdcbqjyhph686iff952nxpldfp19lz6a9l4ksbyzi69mwdc8wab"; depends=[assertthat bsplus crayon dplyr glue htmltools magrittr R6 shiny shinyAce shinyFiles shinytoastr shinyWidgets spsUtil stringr vroom]; }; - spsUtil = derive2 { name="spsUtil"; version="0.1.0"; sha256="1b5lzsj6ax1mi8l42dqz91aljdzvjjw8n3vzx4m8ay9mym9l6dhx"; depends=[assertthat crayon glue httr magrittr stringr]; }; + sprtt = derive2 { name="sprtt"; version="0.1.0"; sha256="1lj4qrn8ajl9lmx9qrcxrrd187khs3afvmf2hpwmakxfn6sajm0z"; depends=[]; }; + sps = derive2 { name="sps"; version="0.1.1"; sha256="1vrhdpmm1da793qvj1k4rda9ssg4k094j2vy9dxhz2zcnillqpl9"; depends=[]; }; + spsComps = derive2 { name="spsComps"; version="0.3.0"; sha256="02wf6ixgsbxmdx9bz69m0xa9d3vqw45i68821lym9yrgysg3azhx"; depends=[assertthat crayon glue htmltools magrittr R6 shiny shinyAce shinytoastr stringr]; }; + spsUtil = derive2 { name="spsUtil"; version="0.2.0"; sha256="1s9x4fkdc2l0wjl00wcw94xbpqnda7bdfrqdrwzkq27364dx0m35"; depends=[assertthat crayon glue httr magrittr R6 stringr]; }; spsann = derive2 { name="spsann"; version="2.2.0"; sha256="00nlrwk50ch128brzvfxld0pcpq1syks9rvwdrcf1i2pcxnva7d0"; depends=[pedometrics Rcpp sp SpatialTools]; }; spselect = derive2 { name="spselect"; version="0.0.1"; sha256="02aiml4dh40n6yl52ypramn4847ykdi4y5lhsmchnnp4nnnqycsn"; depends=[magic pracma tester]; }; spsh = derive2 { name="spsh"; version="1.1.0"; sha256="1rmsgp0mrb4153v5f5xby7r3izvgz1a0vi63g5p9q5jd6z0gd2i1"; depends=[DEoptim FME hypergeo lhs pracma Rdpack]; }; spsi = derive2 { name="spsi"; version="0.1"; sha256="0q995hdp7knic6nca0kf5yzkvv8rsskisbzpkh9pijxjmp1wnjrx"; depends=[plot3D]; }; - spsur = derive2 { name="spsur"; version="1.0.1.8"; sha256="085rxzspd0irg5jl10m1gin0dbfk4nyry81dhwn43icr44k9h810"; depends=[car Formula ggplot2 gmodels gridExtra knitr lmtest MASS Matrix minqa numDeriv Rdpack rlang rmarkdown sparseMVN spatialreg spdep]; }; + spsur = derive2 { name="spsur"; version="1.0.1.9"; sha256="1fadw95dadhzmq4gg0mlpvvmzgr1c62f3g78cmdfbxyv07lrvlvp"; depends=[car Formula ggplot2 gmodels gridExtra knitr lmtest MASS Matrix minqa numDeriv Rdpack rlang rmarkdown sparseMVN spatialreg spdep]; }; spsurv = derive2 { name="spsurv"; version="1.0.0"; sha256="11jlbzvzxv3d1d0nwpbii46ddvphglrxv25rw7pvxbybcx2i7k6x"; depends=[BH coda loo MASS Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; spsurvey = derive2 { name="spsurvey"; version="4.1.4"; sha256="1dz6g0kb4gjsbkmj66926cxlfx7phx6mg483r0qz4wwmmba9qgbh"; depends=[crossdes deldir foreign Hmisc MASS rgeos sf sp]; }; spt = derive2 { name="spt"; version="2.5.1"; sha256="04j38d2b35p4798znnc49vqrg8r8bygwi07vybfj3nzimlp2mkrn"; depends=[]; }; sptm = derive2 { name="sptm"; version="2019.11-25"; sha256="1hdymzngdppmh56dqh0k88n9hg68pbx9rgmimbz4ihnfx2plvadh"; depends=[kyotil survey survival]; }; - sptotal = derive2 { name="sptotal"; version="0.1.0"; sha256="0fr2czqfrk8n3iza2v5vpr00zs4s3dk4ar4xzfsriw5542glhykv"; depends=[ggplot2 matrixcalc mvtnorm sp tibble viridis]; }; + sptotal = derive2 { name="sptotal"; version="1.0.0"; sha256="0lcq7ldrgy93i1pk2hhwfmhqhmijv9g5p7jdsh9hrfky51w8vrql"; depends=[ggplot2 sp viridis]; }; spuRs = derive2 { name="spuRs"; version="2.0.2"; sha256="00c0hnyrcbkbj269czxbfgmgi88y0vxzm79sxclllkzr9rdd1p53"; depends=[lattice MASS]; }; spup = derive2 { name="spup"; version="1.3-2"; sha256="098zga5dm785v5k0s0ql6j17i6zbnka0yhfni4irlki3y1ndw78m"; depends=[gstat magrittr mvtnorm purrr raster sp whisker]; }; sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; }; sqliter = derive2 { name="sqliter"; version="0.1.0"; sha256="17jjljq60szz0m8p2wc5l56659aap7an5gknc848dp89ycjgj3zx"; depends=[DBI functional RSQLite stringr]; }; + sqliteutils = derive2 { name="sqliteutils"; version="0.1.0"; sha256="0v7d52m9yvl5iadqnscgrcvniwhk7i7fmzd3gw23a0q4qxjs8iy9"; depends=[DBI dbplyr dplyr magrittr RSQLite]; }; sqlparseR = derive2 { name="sqlparseR"; version="0.1.0"; sha256="0zcna9y61v1qklpnhrwgv1djg4hyx3k5an32caapszi8qm9nq3x8"; depends=[reticulate]; }; sqlscore = derive2 { name="sqlscore"; version="0.1.4"; sha256="1wvjiy7g0rxfy10vssdrv5li5sbvrin9wjy0ai0nxk503kw7g74k"; depends=[dbplyr]; }; sqlutils = derive2 { name="sqlutils"; version="1.2"; sha256="0dq4idg8i4hv9xg8jllllizqf3s75pdfm1wgncdjj52xhxh169pf"; depends=[DBI roxygen2 stringr]; }; sqp = derive2 { name="sqp"; version="0.5"; sha256="0l01zwcryv5bmzmd98gj0m5ip8nvr8lziq1awvfif1bzwvvd2kzx"; depends=[Matrix Rcpp RcppArmadillo RcppEigen Rdpack]; }; squash = derive2 { name="squash"; version="1.0.9"; sha256="1x66iamj5pir6l9aqx4x7xylxxjpjrw8vcix9rbhfd0y0y2iqf7z"; depends=[]; }; - squashinformr = derive2 { name="squashinformr"; version="0.2.2"; sha256="14ql4rajfis3cmb5yb83nb8mh1rwvw57kclkyc6ymszc791ij7wk"; depends=[dplyr Hmisc janitor lubridate naniar plyr polite rlang rvest stringr tibble tidyr]; }; + squashinformr = derive2 { name="squashinformr"; version="0.2.4"; sha256="1b70vbi4q17hz5w5f9x3d7sw43jcpkxd3jq43ic7i0ll91i80ami"; depends=[dplyr Hmisc janitor lubridate naniar plyr polite rlang rvest stringr tibble tidyr]; }; + squeezy = derive2 { name="squeezy"; version="1.0"; sha256="0ihlgdnfissi0kaw7gwiihrp7kw5447kbwnb7rb1l2jacs60v41n"; depends=[glmnet Matrix multiridge mvtnorm]; }; squid = derive2 { name="squid"; version="0.1.2"; sha256="1sf7q9pp68inr4ikaxm51f31gwxq9ixrsismrnnsby3agq6nsmkb"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; sra = derive2 { name="sra"; version="0.1.3"; sha256="0bdxgsz177szfqmvffidgkhl0lrdd7c1nzdvh7ijx99zmi5ww71n"; depends=[]; }; srcr = derive2 { name="srcr"; version="1.0.0"; sha256="1wk18a1c0pf6mq3k78qi7fhivahx2q22rcs2ajsdj73b0993wnbm"; depends=[DBI dplyr jsonlite]; }; + sregsurvey = derive2 { name="sregsurvey"; version="0.1.0"; sha256="0bsiwhp6c8kv2kgdpwiafydgr1cia5y3c786qgil1b9wnswzxnj5"; depends=[caret dplyr gamlss gamlss_dist TeachingSampling]; }; srm = derive2 { name="srm"; version="0.3-6"; sha256="0mc97pv1hsmia4v2wyb8yi37i3v1xypfv9xmhjb989xnnysf1lm3"; depends=[Rcpp RcppArmadillo]; }; srp = derive2 { name="srp"; version="1.2.0"; sha256="0xdzfvi7z78xmyxwd8fha3lr86jwmgjba1w8hhn4sv3v5gc9vlkh"; depends=[fda mgcv]; }; - srt = derive2 { name="srt"; version="1.0.2"; sha256="0fwazvjfi622vlvx0zn43inbj3f8xyl3n5rca31i80li6a9gw3n1"; depends=[]; }; + srt = derive2 { name="srt"; version="1.0.3"; sha256="0m94ycnrlgjvlx9jzb05rdg57yxwsw3p7zjih0m04vb1369j83q1"; depends=[]; }; srvyr = derive2 { name="srvyr"; version="1.0.1"; sha256="0yvdxznfp1pfhg101rav0yzrcnjjani1d0c49r54cq1qabikkljx"; depends=[dplyr magrittr rlang survey tibble tidyr tidyselect]; }; ss3sim = derive2 { name="ss3sim"; version="1.0.3"; sha256="0s2yajlhi07fvqc0rr4msd9g2jrswb83dx55wsxnw925vikqa5kz"; depends=[bbmle foreach ggplot2 gtools r4ss]; }; ssMousetrack = derive2 { name="ssMousetrack"; version="1.1.5"; sha256="069jsp2l63jp4fv2hwadqxpkp89aqmbh439zy66rx55kws75b556"; depends=[BH CircStats cowplot dtw ggplot2 Rcpp RcppEigen rstan rstantools StanHeaders]; }; @@ -15915,18 +16571,20 @@ in with self; { ssc = derive2 { name="ssc"; version="2.1-0"; sha256="1lq71p8hbjfg4a52009810k5dmhak9ddk1dywvhy7v2gjmxqnadw"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; - ssdtools = derive2 { name="ssdtools"; version="0.3.3"; sha256="1xvc4z2wy2jl7qj163lm6az8qh7by9dvs5raxf9sd95snn7x61ms"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle Rcpp scales tibble VGAM]; }; - sse = derive2 { name="sse"; version="0.7-16"; sha256="1kxdgbskw7v48jnif4dpmwxpsdznfx8d9q5nkf3ynw9xl38rzv23"; depends=[lattice]; }; + ssdtools = derive2 { name="ssdtools"; version="0.3.6"; sha256="0np59vj37cdq413g77girc03n6gmjfjgln3mvqb1xb7x005ziqji"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle Rcpp scales tibble VGAM]; }; + sse = derive2 { name="sse"; version="0.7-17"; sha256="0aqpi70rgmh2kmf11z2cvyl8c9klv8jm81pcpkzjrw3pbpgkqizf"; depends=[lattice]; }; ssev = derive2 { name="ssev"; version="0.1.0"; sha256="1iw07gw9vhg073s5kkxh5f1si6p998rc1i2zglnpk5c3pi3l55wp"; depends=[MESS pwr]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; ssfit = derive2 { name="ssfit"; version="1.1"; sha256="1fais0msi2ppgfp0vbx3qri7s9zs51i7n90w36xkwwac4f46bq5y"; depends=[survey]; }; ssgraph = derive2 { name="ssgraph"; version="1.12"; sha256="0mcg8bzgx0376f72xxqmsfwmnmfk6lcmam19d28psr1sxnhngklj"; depends=[BDgraph]; }; ssh = derive2 { name="ssh"; version="0.8.0"; sha256="0y9rrvn21mc9ivjlz6zmg5h282d2gycyjda8sh9k0gx0y4c2m30i"; depends=[askpass credentials]; }; ssh_utils = derive2 { name="ssh.utils"; version="1.0"; sha256="08313zzzgcyvzkrkq0w0yf748ya1a9shx5xnan5891v0lah9v0b1"; depends=[stringr]; }; + sship = derive2 { name="sship"; version="0.7.1"; sha256="09pgpwhm63n266v9c9g4mp1461dlf4fhigqjnf1cpagsbgil8raj"; depends=[httr jsonlite openssl RCurl yaml]; }; + ssimparser = derive2 { name="ssimparser"; version="0.1.0"; sha256="1h4jwfcbsimwkwwfpjdi9mipc8z8ia6b6ha6v9dz7ghgpp1a2919"; depends=[airportr dplyr magrittr stringr tidyr]; }; ssize_fdr = derive2 { name="ssize.fdr"; version="1.2"; sha256="0y723lwsnmk3rxbhlsrny9hiy07a5p255ygy9qkj6mri64gk1hby"; depends=[]; }; ssizeRNA = derive2 { name="ssizeRNA"; version="1.3.2"; sha256="1qw10yswzpg28fhvr6rsq0gh7xivfapw64gxc0hakb1nc31jf8ky"; depends=[Biobase edgeR limma MASS qvalue ssize_fdr]; }; ssmn = derive2 { name="ssmn"; version="1.1"; sha256="1rab9yjb05g5rphqlhwvdwmsyqlv1f4m0rqxfv8c5pbh170nbwbc"; depends=[mnormt moments sn truncdist]; }; - ssmrob = derive2 { name="ssmrob"; version="0.8"; sha256="1y5a02xqj931gyfxqp7i87nkinbm4wan0pq08f111q05zg1j8wmj"; depends=[MASS robustbase sampleSelection]; }; + ssmrob = derive2 { name="ssmrob"; version="1.0"; sha256="1xzhk8ni6375p2nfnl39x51ny2wi53a09fkr95nrdbxhkcm5flvz"; depends=[MASS robustbase sampleSelection]; }; ssmsn = derive2 { name="ssmsn"; version="0.2.0"; sha256="0fzqdkqhj5hh8pzcwh7i0rglgdq22a5mriyis8r1vhlkdc7n5m39"; depends=[MCMCpack]; }; sspline = derive2 { name="sspline"; version="0.1-6"; sha256="0d6ms8szyn39c7v0397d5ar2hrl8v1l2b7m8hlj37hgp70b9s55h"; depends=[]; }; sspse = derive2 { name="sspse"; version="0.6"; sha256="1296893wgg0s6z5bv9a3k39gbxazvljl4dxiv4ma1s73nhz0xan9"; depends=[coda RDS scam]; }; @@ -15940,10 +16598,9 @@ in with self; { ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; st = derive2 { name="st"; version="1.2.6"; sha256="0v2bii21c0dg25zbf2379q7jy6z4z93hpw3rd32gm77bvgr0fd40"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.4"; sha256="120k8k1l8cfy8x746808jym7lnaplgh4s3lycgyq2wia2c35r0rc"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; - stUPscales = derive2 { name="stUPscales"; version="1.0.3.4"; sha256="0a6b38lhi1p0n2hjq2j8aw2vkasdv50cpgllxfxla7ddwbhbk3nk"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; sta = derive2 { name="sta"; version="0.1.5"; sha256="0q9pplx4ifndvbh2bfa96vjbcaaqdj6bq57kwlzhavq6hjq7d56v"; depends=[doParallel foreach geoTS iterators mapview raster RColorBrewer rgdal trend]; }; staRdom = derive2 { name="staRdom"; version="1.1.21"; sha256="1h7hakl8i1ry8rfx80na3qs0ryxr6cajh9szrb5rwww0ay43bswz"; depends=[askpass cdom data_table doParallel dplyr drc eemR foreach GGally ggplot2 gtools httr matrixStats MBA multiway pracma R_matlab readr stringr tibble tidyr zoo]; }; - staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; + stabiliser = derive2 { name="stabiliser"; version="0.1.0"; sha256="1d6aka5k51gnxfwyhv70n9pwxzp7ldyq10ircp6bphalwr0m35vv"; depends=[bigstep broom caret dplyr ggplot2 glmnet ncvreg purrr rsample stringr tibble tidyr]; }; stability = derive2 { name="stability"; version="0.5.0"; sha256="0mz7ikfhpfbdcp72klq7fi4zfmx2w18gz46yhwywcc4dyi277m11"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.4"; sha256="01azqg4yi5wl6wfdpjq57w41x5z2b4dsp5n3vpkz24b9avk6rm8s"; depends=[rmutil stabledist]; }; stableGR = derive2 { name="stableGR"; version="1.0"; sha256="1glxrxqd3gr7npwlzcr2nmsmakydyxg7hswvb85gz1jvc6c6254f"; depends=[mcmcse mvtnorm]; }; @@ -15954,30 +16611,34 @@ in with self; { stabreg = derive2 { name="stabreg"; version="0.1.2"; sha256="1jrxyv0d33vd9vdlj1cv1a2qdz8iqgr726f54dgazwsz3cpyy2ia"; depends=[numDeriv]; }; stabs = derive2 { name="stabs"; version="0.6-4"; sha256="1nf1yg14cgxrs4np1yghpzw1nczaslfv3rvf3918wrlzg0vp6l7q"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.7.0"; sha256="0zv8bxzw4pgaa5ra8wsb9p7g8bwffdhc6gqsfrcs61zva7v9izc2"; depends=[]; }; - stacks = derive2 { name="stacks"; version="0.2.0"; sha256="1pb7p2ssr0878c5mn4fcxvdv60jafg85772spqh88b68dsbschhj"; depends=[butcher cli dials dplyr foreach generics ggplot2 glmnet glue parsnip purrr recipes rlang rsample tibble tidyr tune workflows workflowsets yardstick]; }; + stacks = derive2 { name="stacks"; version="0.2.1"; sha256="0a69fvj48npcbm0jj0506mq5m9hdprva247nyhiays6ar4ic52kv"; depends=[butcher cli dials dplyr foreach generics ggplot2 glmnet glue parsnip purrr recipes rlang rsample tibble tidyr tune workflows workflowsets yardstick]; }; stacomirtools = derive2 { name="stacomirtools"; version="0.5.3"; sha256="00zpsfrw0gcjbjr3xdxf2wacrr1zfw6wq7a2ycq32pbh2smbkz4k"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; - stagedtrees = derive2 { name="stagedtrees"; version="2.1.0"; sha256="05i2v6wxw79q9h31rfy53lgi23a7k0vlp7rmxfv5v3zdbvyfy8ja"; depends=[]; }; + stagedtrees = derive2 { name="stagedtrees"; version="2.2.0"; sha256="01qb8pw0al3b3b6smcapd61i81p6xw3hh1x8i6dsb73pdvpbfyxj"; depends=[]; }; + staggered = derive2 { name="staggered"; version="1.1"; sha256="0z9358qbgn637j8iz5qwr4nyrlvi9w85l325vxpc61mcwksx5ip8"; depends=[coop dplyr magrittr MASS purrr Rcpp RcppEigen reshape2 tidyr]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; stampr = derive2 { name="stampr"; version="0.2"; sha256="10mc71kgnw5712q2gvzd4bmjaw1879r7s599hfsjap21idqb2k2m"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; standardize = derive2 { name="standardize"; version="0.2.2"; sha256="008nz9vf08qxwdsn373yzpmsw5lhbm6mpm6dlwyys58wq0bdvh28"; depends=[lme4 MASS stringr]; }; + standartox = derive2 { name="standartox"; version="0.0.1"; sha256="1b5w66x4v8hfxzp3ahw97my6m0rcn22iv5nhgm2wzdq0if0cq8py"; depends=[curl data_table fst httr jsonlite]; }; + stanette = derive2 { name="stanette"; version="2.21.2"; sha256="1266555964cymrgrmfzjk2x12hpyjvd18c8q0lx92wdssnqzhhzr"; depends=[BH brew coda ggplot2 gridExtra inline lattice loo pkgbuild Rcpp RcppEigen RcppParallel StanHeaders V8 withr]; }; stapler = derive2 { name="stapler"; version="0.7.1"; sha256="1bzhahn72fzm2bjpis76hphv8whnkp2jq8bm1qldadhng4z1nsak"; depends=[matrixStats RNifti]; }; staplr = derive2 { name="staplr"; version="3.1.1"; sha256="0g3a13qndi4w35wq9bm0gb2b8v9svih9gbj5ymggqlcwz1dzywga"; depends=[assertthat glue rJava stringr XML]; }; stargazer = derive2 { name="stargazer"; version="5.2.2"; sha256="1pij76r60hkjlvxw6zw1v7gkib81smiqmjq7mwszn6xclq9lmsvh"; depends=[]; }; starm = derive2 { name="starm"; version="0.1.0"; sha256="0y580c6inmfix6agwd5nr340l3hjk2xxs95s468j5pghpjpb8rmv"; depends=[Matrix]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starnet = derive2 { name="starnet"; version="0.0.6"; sha256="0gbg8svyj4nh846q7986ap7jjry599kb1348k9lifz19kvyr4rn4"; depends=[cornet glmnet Matrix survival]; }; - stars = derive2 { name="stars"; version="0.5-2"; sha256="0w2svw02ywvclq0nsnjns1n0rfr54q7x30y64y14n7zfr969ly1n"; depends=[abind classInt lwgeom rlang sf units]; }; - starsExtra = derive2 { name="starsExtra"; version="0.2.4"; sha256="0dpcr7p8ss29rxknzzhsa1hl72lky8ii6wnyialydb9d051d019q"; depends=[mgcv nngeo sf stars units]; }; + stars = derive2 { name="stars"; version="0.5-3"; sha256="00cljaz98iy3wymabp7b47qgxdybg9jgjkw7q6da1ginmy14m524"; depends=[abind classInt lwgeom rlang sf units]; }; + starsExtra = derive2 { name="starsExtra"; version="0.2.6"; sha256="0z64alwx1m4cfjbgymqd61j5rx0b52bs9d7qhng7kplbnws8hn3j"; depends=[mgcv nngeo sf stars units]; }; starschemar = derive2 { name="starschemar"; version="1.2.0"; sha256="0jjaic1zwdc3lvdlgs0vzkjjivjs2dskmhx4qg469ban34az0591"; depends=[dplyr generics pander purrr readr rlang snakecase tibble tidyr tidyselect]; }; startR = derive2 { name="startR"; version="2.1.0"; sha256="1cgn77jaiy7gfqbhh6w3x0bf57v32vzpp334mp50v827hgv439wy"; depends=[abind bigmemory ClimProjDiags easyNCDF future multiApply s2dverification]; }; + starter = derive2 { name="starter"; version="0.1.5"; sha256="1f3v8q370di2s22fxh0hdmdnsfcidqvfwrpz3m568nzh33v23dlf"; depends=[dplyr fs gert glue here purrr R_utils readr renv rlang stringr tibble usethis]; }; startup = derive2 { name="startup"; version="0.15.0"; sha256="05a5drjzmc969yn5y62gy1ja469nqrcbicycvjmlgrrfcj7918mi"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.6"; sha256="0vkqxir4ady4dn9s70dfg1fxck2xg8vnmrmxjzvk01i6pc9zyq0x"; depends=[]; }; - starvars = derive2 { name="starvars"; version="1.1.2"; sha256="1pxj8idzacbvbyy0p1p44if2np1cq9kz9zvqbr4r3ip1vdscgkqf"; depends=[data_table dplyr fGarch ks lessR lubridate MASS matrixcalc maxLik quantmod rlist vars xts zoo]; }; + starvars = derive2 { name="starvars"; version="1.1.7"; sha256="0m8f104s49k2wh89c7k8pz1c5x4xm7qy9hf90fk2kh84nw6jxnbs"; depends=[doSNOW foreach ks lessR MASS matrixcalc optimParallel quantmod vars xts zoo]; }; starvz = derive2 { name="starvz"; version="0.5.0"; sha256="0q8y6s224jmj4hzdd7cn0s7yrckdxgv1kqlv4hbq8d7743s0c8gw"; depends=[arrow BH car data_tree dplyr flexmix ggplot2 gtools lpSolve magrittr patchwork purrr RColorBrewer Rcpp readr rlang stringr tibble tidyr yaml zoo]; }; starwarsdb = derive2 { name="starwarsdb"; version="0.1.2"; sha256="00n9qqw4lbfk698qgvw8i42sy3dv5i5fiiqma3zks4rr9yspkldq"; depends=[DBI duckdb magrittr tibble]; }; stat_extend = derive2 { name="stat.extend"; version="0.1.4"; sha256="1m3bjwgb0g0c445xy9b29yibnf8ldjfnyd0i519dxnh31b6k8vy9"; depends=[sets]; }; - statGraph = derive2 { name="statGraph"; version="0.4.1"; sha256="1svsjdh7w1gb37frn2y2rvkrldcm1nws6xhl18bxpx0g29z4915r"; depends=[cluster doParallel foreach igraph MASS rARPACK]; }; + statGraph = derive2 { name="statGraph"; version="0.5.0"; sha256="0fd7jsngd8gihivnir3y58961kvbdd5g1m5gm1da91984qs7r9q1"; depends=[cluster doParallel foreach igraph MASS rARPACK]; }; statVisual = derive2 { name="statVisual"; version="1.2.1"; sha256="1cc9p9g8lzn0lgh793r977yhqbk89l74m443gnznjlfml69bfb21"; depends=[Biobase dplyr factoextra forestplot gbm GGally ggdendro ggfortify ggplot2 ggrepel glmnet gridExtra knitr limma magrittr pheatmap pROC pvca randomForest RColorBrewer reshape2 rmarkdown rpart_plot tibble tidyverse]; }; statar = derive2 { name="statar"; version="0.7.3"; sha256="17zg1g0ndsysrqj0alpx0sgmc69d3jkqr543l8m758mnm9bw83c9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyselect]; }; statcanR = derive2 { name="statcanR"; version="0.2.1"; sha256="12b78n88dmpk6lfw83dwhnvx98wjry4ykyamgbb96l2mrpwbabng"; depends=[curl data_table]; }; @@ -15986,27 +16647,29 @@ in with self; { statebins = derive2 { name="statebins"; version="1.4.0"; sha256="1v67da939qg672aqni2i37w70pgasgx6r55b4fjjc3zzviq8gipx"; depends=[ggplot2 scales]; }; states = derive2 { name="states"; version="0.3.1"; sha256="1yi7yigmxjcpa2p75bq0jj1pmiv5xh6zsxhayg7pa7p7fqdl3d9i"; depends=[dplyr lifecycle rlang]; }; statespacer = derive2 { name="statespacer"; version="0.4.0"; sha256="06qjbnp40mkbjxq14cwzpwcqymafm14cli1kmjfqwl4g1v9bvsx3"; depends=[Rcpp RcppArmadillo Rdpack]; }; - statgenGWAS = derive2 { name="statgenGWAS"; version="1.0.5"; sha256="1faxc4nd4ldslb47vsz8aw31c8f9fvmaacbq1zwc23dvqnrvzawn"; depends=[data_table ggplot2 Rcpp RcppArmadillo sommer]; }; + statgenGWAS = derive2 { name="statgenGWAS"; version="1.0.7"; sha256="1y740vpymxnyzdizayp6nqhwni363cgsf0323m0vxb76kd78jiid"; depends=[data_table ggplot2 Rcpp RcppArmadillo sommer]; }; statgenGxE = derive2 { name="statgenGxE"; version="1.0.4"; sha256="12v9a1lg12pmhzk28c929j1vhhh5x9gzb6ia9izvji2zjx2yigk4"; depends=[emmeans ggplot2 gridExtra knitr lme4 statgenSTA xtable]; }; - statgenHTP = derive2 { name="statgenHTP"; version="1.0.1"; sha256="18jcjq7v4xmkx824l74a8g19gxr3pcmvgvh6zlq0jx7j2d4ccwlf"; depends=[animation factoextra ggforce ggplot2 gridExtra locfit lubridate reshape2 scales SpATS]; }; - statgenSTA = derive2 { name="statgenSTA"; version="1.0.7"; sha256="07qj9cnwpv946zgp1w3ipxr6vna8kxhk0nlz6zq2awc7qpnda4cr"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl scales SpATS xtable]; }; + statgenHTP = derive2 { name="statgenHTP"; version="1.0.5"; sha256="1lclxc4al3h7z5cbjhmm6p1hr22gysz16hlvfams37czbc2prlha"; depends=[animation factoextra ggforce ggnewscale ggplot2 gridExtra locfit lubridate reshape2 scales SpATS]; }; + statgenIBD = derive2 { name="statgenIBD"; version="1.0.1"; sha256="0a4w7g0bhfqr8r8n1sv0vh6pji9drjwkd5qy01w6kap60yf7qh3l"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + statgenSTA = derive2 { name="statgenSTA"; version="1.0.8"; sha256="1734gqcrwkxl3672pf147qh5n8lid4zk81zfanhqi6z83syw5ha5"; depends=[emmeans ggplot2 ggrepel gridExtra knitr lme4 mapproj maps qtl scales SpATS xtable]; }; stationaRy = derive2 { name="stationaRy"; version="0.5.1"; sha256="1620fdlybn3hr96yngnp802imr9b7n90835lyyd86r2wn6psdzvl"; depends=[downloader dplyr lubridate lutz magrittr progress readr stringr tidyr]; }; stationery = derive2 { name="stationery"; version="0.98.30"; sha256="0gr4nja8xsajrx34m6cxpw3jc59flh7n5d3x111znajfwbym1b5n"; depends=[knitr kutils rmarkdown]; }; statip = derive2 { name="statip"; version="0.2.3"; sha256="0kymc3ds1nx0h11ffmm3vmqr1w34gd0k788vf72x2v45h8c1ma2n"; depends=[clue rpart]; }; - statmod = derive2 { name="statmod"; version="1.4.35"; sha256="1zpqnfslq5gi6hvqjqnsn5kf2m986s1yb6kvyjd881n3h67l4pny"; depends=[]; }; + statmod = derive2 { name="statmod"; version="1.4.36"; sha256="1hkvklcav6gj4zib4g3b4xwsdsbsmnzdblr0v6jaqv227p49gs0l"; depends=[]; }; statnet = derive2 { name="statnet"; version="2019.6"; sha256="17dj6vjnjyqrfhzjq1lys5b29j942kd15zffb69jidni3slf20q9"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm tsna]; }; - statnet_common = derive2 { name="statnet.common"; version="4.4.1"; sha256="1z89an46xcl1d7dacj4irhk6pkajdz7v85b2347vczwdf622pksf"; depends=[coda rle]; }; + statnet_common = derive2 { name="statnet.common"; version="4.5.0"; sha256="0bw8dwnv568i60xrj6d7gv0hnna1x7rvqaayy5i0827khvdj7nrw"; depends=[coda]; }; statnetWeb = derive2 { name="statnetWeb"; version="0.5.6"; sha256="1haf2kr1mwvaz4hlwla2ysbcy3sbfcg3i4hyiy9y6lcffvy4w9w0"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; - statnipokladna = derive2 { name="statnipokladna"; version="0.6.0"; sha256="01rh2ihh0cc7fnda1h3bk75n0f4939480l6d6vhl6x8nrfk4hhw4"; depends=[curl dplyr httr jsonlite lifecycle lubridate magrittr purrr readr rlang stringi stringr tibble tidyr usethis xml2]; }; + statnipokladna = derive2 { name="statnipokladna"; version="0.7.0"; sha256="0xds27abs9x853nhy5xljldmxh5xrkxfgn5q6qw8b093ynrsvbrp"; depends=[curl dplyr httr jsonlite lifecycle lubridate magrittr purrr readr rlang stringi stringr tibble tidyr tidyselect usethis xml2]; }; statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; + statpsych = derive2 { name="statpsych"; version="1.0.0"; sha256="0rakzsbafhp5xps9bbb4pljv4c49ij1rwz64z0q5jjglc95kw55s"; depends=[mathjaxr Rdpack]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; - stats19 = derive2 { name="stats19"; version="1.4.1"; sha256="1hxxbmaycirzlf8mpsrk89g1ar0ky4vlhblnlxdkhd81ikas2laj"; depends=[readr sf]; }; - statsExpressions = derive2 { name="statsExpressions"; version="1.0.1"; sha256="0db3r9gybldd1lsyckd9p54bi1k9w18amgambgfx0qvqrfx637pf"; depends=[BayesFactor correlation dplyr effectsize insight ipmisc parameters performance rlang tidyr WRS2]; }; + stats19 = derive2 { name="stats19"; version="1.4.3"; sha256="1kbc02c8h7mqdx8sx6c5qhj2c8wx12jcq9vyqxr9zyj4mjx5ayqs"; depends=[readr sf]; }; + statsExpressions = derive2 { name="statsExpressions"; version="1.1.0"; sha256="0ds9bywdff4znswxd7ik18rwm93c5h22w3lmypfrc9kjjqvvn070"; depends=[BayesFactor correlation dplyr effectsize insight ipmisc parameters performance purrr rlang tidyr WRS2]; }; statsr = derive2 { name="statsr"; version="0.3.0"; sha256="138yjifz8q3dqcm3wbzn4sxdydwnqvwkz0h20r8ls3pijqh6fc2y"; depends=[BayesFactor broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tibble tidyr]; }; - statswalesr = derive2 { name="statswalesr"; version="0.1.2"; sha256="0j6xv7cb2lnyw7ac86cmry9x7s0nynnpl3ibi592qmx4mhcfm5fc"; depends=[curl dplyr httr jsonlite rlang]; }; + statswalesr = derive2 { name="statswalesr"; version="0.1.4"; sha256="1q1825aiaq5mfcfdw8fy22w738cn0x2ifij7p3p276x0sl1cbrdm"; depends=[curl dplyr httr jsonlite rlang]; }; stcos = derive2 { name="stcos"; version="0.3.0"; sha256="0niy8inajs0vafbh47w5rajlp3bvgi9yakhyabjdrqhkjzs79lpx"; depends=[dplyr Matrix Rcpp RcppArmadillo sf]; }; stcov = derive2 { name="stcov"; version="0.1.0"; sha256="166w929sgd7nanw1zjhzwv50hd5vqhgsrgxnsga4dzrcvndalw70"; depends=[]; }; - stdReg = derive2 { name="stdReg"; version="3.4.0"; sha256="003lp8yshjdql475hdpickwr0fngzn9qps1dzvx8zfy4x51xy8xl"; depends=[data_table drgee numDeriv survival]; }; + stdReg = derive2 { name="stdReg"; version="3.4.1"; sha256="0x4awgbja70mdpbavgkg9mpnrxxc0qpsnl8i3rj9hs4vwbdkalr8"; depends=[data_table drgee numDeriv survival]; }; stddiff = derive2 { name="stddiff"; version="3.0"; sha256="1z6rdchf46aaq0z9bp4dlc4h3swrgyjfdvg40f4lkyg5sgs4sliy"; depends=[]; }; stdvectors = derive2 { name="stdvectors"; version="0.0.5"; sha256="0gxylknr146qyg9aj22md076cdhrsz75dg25a1hx8525cm71nwd6"; depends=[Rcpp]; }; steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; @@ -16019,16 +16682,17 @@ in with self; { stepR = derive2 { name="stepR"; version="2.1-1"; sha256="0mz88d7214g59nvr40c4gf4grq9skjqqlfgydbdzmc4l315nr4zv"; depends=[digest lowpassFilter R_cache Rcpp]; }; stepp = derive2 { name="stepp"; version="3.2.2"; sha256="1iyj1f9gzn44xllhm9y1j0ynfz4q48d2l8ic4mjvzc3p4z8cnpmz"; depends=[car rstudioapi scales survival]; }; steps = derive2 { name="steps"; version="1.2.1"; sha256="04n5m7a5yp3karhiwgcl6fzfp85iad2xymdwp1kyqbagx2acyrka"; depends=[future future_apply memuse raster rasterVis Rcpp viridisLite]; }; - stevedata = derive2 { name="stevedata"; version="0.4.0"; sha256="0ccss7wgmqjwk1h1piy5zlzsk660x7d7hf557q39ds850hfp4hzs"; depends=[]; }; + stevedata = derive2 { name="stevedata"; version="0.5.0"; sha256="1cfq1fdyv8cxk4h1r7dgbypia3ih31svw3r024bkfzw986jqvzk0"; depends=[]; }; stevedore = derive2 { name="stevedore"; version="0.9.3"; sha256="00zs2bl5h40rwbhnynjw2jbxlixjnk14rxn9chypqg5zgx9pqg2s"; depends=[crayon curl jsonlite yaml]; }; - stevemisc = derive2 { name="stevemisc"; version="1.0.0"; sha256="0v654cc0czq128m52zjj7y1jv3xyyvbc6gw2fx2m1bznz5xlgxk8"; depends=[arm broom_mixed DBI dbplyr dplyr forcats ggplot2 labelled lme4 magrittr purrr rlang RSQLite tibble]; }; - stevetemplates = derive2 { name="stevetemplates"; version="0.5.0"; sha256="1a350j9wsf2l63hk78msf4y8kk54466kg0j3dcsqhp1dlvbqdbik"; depends=[rmarkdown]; }; + stevemisc = derive2 { name="stevemisc"; version="1.2.0"; sha256="0dxql12ci68vm4dz839ds7ifz9g5p4gc7lqxpw98i37yabhqmpz5"; depends=[arm broom_mixed dplyr forcats ggplot2 httr labelled lme4 magrittr purrr rlang rmarkdown stringr tibble]; }; + stevetemplates = derive2 { name="stevetemplates"; version="0.6.0"; sha256="1xwf4c2g5n4av19xxj1vm3gv2200kqnzvxh7qzkbgs8b6s9ivly7"; depends=[rmarkdown]; }; stfit = derive2 { name="stfit"; version="0.99.8"; sha256="0js09v04ik5m3d9iz9waq0yigvg2g6n75m4zm5dc0nz3yr1irb88"; depends=[abind doParallel fda foreach Matrix raster rasterVis RColorBrewer Rcpp]; }; stickr = derive2 { name="stickr"; version="0.3.1"; sha256="0krz123vz4bdcdi4p27r637pgz4rcj6kmyiqdf5x69riddvfxx8r"; depends=[base64enc fs gh stringr]; }; sticky = derive2 { name="sticky"; version="0.5.6.1"; sha256="1szfpay9cpdwq6v5fmnjyr00r4zhz6zd2rrl3h88v9l5xpfafi4w"; depends=[]; }; stilt = derive2 { name="stilt"; version="1.3.0"; sha256="0b1bs849hw2wcvaldybxk8h8wgwl6p7x4i7winncvngmhplgrvx4"; depends=[fields]; }; stima = derive2 { name="stima"; version="1.2.1"; sha256="091pjjr2pvd93l01szyj5gr9ixv1h90yd18h678nhpn0fncimszv"; depends=[rpart]; }; stinepack = derive2 { name="stinepack"; version="1.4"; sha256="0crl77gr4x2bz2zp0a0lqiw5iqlrcx7vj67igkbzg64d1fxai85d"; depends=[]; }; + stlARIMA = derive2 { name="stlARIMA"; version="0.1.0"; sha256="1bh88dd9md8w8qhmha02v2b7cz0pfk6yrc5bhxj8xv9cwanl7g6r"; depends=[forecast]; }; stlELM = derive2 { name="stlELM"; version="0.1.0"; sha256="1sn4yn24k2nkcc5vxdmzj7ym9kzwffyysd5ckbpv7fggf1vajnif"; depends=[forecast nnfor]; }; stlTDNN = derive2 { name="stlTDNN"; version="0.1.0"; sha256="1j2f9kxlry15xp7bc03h5jr7v8gzq8frdxyzhq9s78m3d3dbixf4"; depends=[forecast nnfor]; }; stlcsb = derive2 { name="stlcsb"; version="0.1.2"; sha256="08pnj1yb4xcbhnrp2wny8lq9rvcvmsgaza07k4358csfksvmcira"; depends=[dplyr lubridate purrr readr readxl rlang rvest sf stringr tibble xml2]; }; @@ -16036,41 +16700,42 @@ in with self; { stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; stm = derive2 { name="stm"; version="1.3.6"; sha256="0qwq4nin2n9fjd06852r8k7arvcgh46kcfb3lm21swgx6j8bgrhb"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; - stmgp = derive2 { name="stmgp"; version="1.0.3"; sha256="0yg2ffvaylhxfclkixk9n1wxigasvirdzdywqg016hjg7w166bp1"; depends=[MASS]; }; + stmgp = derive2 { name="stmgp"; version="1.0.4"; sha256="1yf0hr5gaql424ikjm9ra50vz4ppfsshhf89xphl7c9v9a6bjvw0"; depends=[MASS]; }; stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; stminsights = derive2 { name="stminsights"; version="0.4.1"; sha256="1ll2chjz9r08lya2z7dnxjqdnwrvw7jn05mpvvxi1w8s2npsggib"; depends=[dplyr ggplot2 ggraph ggrepel huge igraph purrr readr scales shiny shinyBS shinydashboard shinyjs stm stringr tibble tidygraph]; }; stoRy = derive2 { name="stoRy"; version="0.1.5"; sha256="1ccx5xpjx4f6y4afay7zk195891xx2z6z2a11xqx5qg8rf0fv9jm"; depends=[data_tree R6]; }; - stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; + stocc = derive2 { name="stocc"; version="1.31"; sha256="0d0n9nrcva0vradippq30y6dc6klwd1mllnzpnzq9rczpz5cw7mw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochQN = derive2 { name="stochQN"; version="0.1.2"; sha256="1zwxw95jrpkqgbgwhwdy907v9gqmvn5as4v35a75wvy3nhawka9a"; depends=[]; }; stochprofML = derive2 { name="stochprofML"; version="2.0.3"; sha256="0j6m2byh7w9kcbp3mfvmg6fm6z0dq8k4qabj1yfkl0d1y2ifd1zd"; depends=[MASS numDeriv]; }; - stochvol = derive2 { name="stochvol"; version="3.0.4"; sha256="1w784p7qbiq2xjfhh7djs0zzy5lav3b5l2kjcdn2x5k6wydbfki1"; depends=[coda Rcpp RcppArmadillo]; }; - stochvolTMB = derive2 { name="stochvolTMB"; version="0.1.2"; sha256="0m1b8jcrr8pxa2m9gzj7dljzr19j7n4w9i8m0p5mrb559ljbj0i0"; depends=[data_table ggplot2 RcppEigen sn TMB]; }; + stochvol = derive2 { name="stochvol"; version="3.1.0"; sha256="04ds1knjdy39is7wyqhcncpmyr1bd45l7g3wrz8hll3bzap5c8wj"; depends=[coda Rcpp RcppArmadillo]; }; + stochvolTMB = derive2 { name="stochvolTMB"; version="0.2.0"; sha256="07m3qz8j1sw37lrxzmbkbifd3nsdvd2blbca8vr1aq5bbafr1g1b"; depends=[data_table ggplot2 MASS RcppEigen sn TMB]; }; stockR = derive2 { name="stockR"; version="1.0.74"; sha256="002i0bhyskwyjjczfa752ghn19hvqhdyzdfkpvci3hb66rh94x65"; depends=[gtools RColorBrewer]; }; stockfish = derive2 { name="stockfish"; version="0.1.2"; sha256="059mi39js7y4f7jlp23blql11j7n3j7137aac2fpp64wv6af0fsp"; depends=[processx R6]; }; stocks = derive2 { name="stocks"; version="1.1.4"; sha256="0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp TTR zoo]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; - stokes = derive2 { name="stokes"; version="1.0-7"; sha256="0wgj50319rvmj6b6fpzm5725v7fydh48gnijgf25327cvhkwlbh1"; depends=[magrittr mathjaxr partitions permutations spray]; }; + stokes = derive2 { name="stokes"; version="1.0-8"; sha256="0hdw7yyakbn78prxyydv09j2k3xj2fwy0v2nxw3n7mm2qgkjggg9"; depends=[magrittr mathjaxr partitions permutations spray]; }; stopwords = derive2 { name="stopwords"; version="2.2"; sha256="1f862y30c4r0phamlp7shzkpxg0vh3i410xy0336w310hv3wqsxn"; depends=[ISOcodes]; }; storr = derive2 { name="storr"; version="1.2.5"; sha256="0qszdq16bf0dbss33zi63ciwmkgjsyc0c3akrr2kl14w3ncw6922"; depends=[digest R6]; }; + storywranglr = derive2 { name="storywranglr"; version="0.2.0"; sha256="07w3dwv2naqbbdzjcv58cisj7cv1rbhrk96a30q8ww11rf953rj4"; depends=[dplyr httr jsonlite tibble urltools]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.8.2"; sha256="0zljgrrwprpifnpnfm3bxws2zpgzbira3f6c0jr17nazala3w7sh"; depends=[curl data_table dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor pbapply raster Rcpp RcppArmadillo rgeos rlang sf sfheaders sp stringr]; }; + stplanr = derive2 { name="stplanr"; version="0.8.3"; sha256="0f6nznb4djvya8pj2zb0gn5ldmamnhgw00h4527k69k289r33d5p"; depends=[curl data_table dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor pbapply raster Rcpp RcppArmadillo rgeos rlang sf sfheaders sp stringr]; }; stpm = derive2 { name="stpm"; version="1.7.10"; sha256="0y9rpqjn33gdqjvag4kb6dr00w80paspgj9ic25brclfv1zmzbhf"; depends=[MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="2.0-5"; sha256="1p7dxzfhi5pvva956nyypl7dfdgq3m0cara73hai87qzc342xcf0"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat_core spatstat_geom splancs]; }; - str2str = derive2 { name="str2str"; version="0.1.1"; sha256="07micl45d5inhx0rlcfhanp64wdj85j51bgg8ba774arlc492r9b"; depends=[abind checkmate plyr reshape]; }; + str2str = derive2 { name="str2str"; version="0.2.1"; sha256="180m261hr0qr3mnm8hbvjbw3q44cr1kfrnq97fvkpypigdycd9z4"; depends=[abind checkmate plyr reshape]; }; strand = derive2 { name="strand"; version="0.2.0"; sha256="0gd9nnbdilvk4bszg77bxilan6qpg1np7c38w1b7j5sr3r30y5in"; depends=[arrow dplyr ggplot2 lubridate Matrix R6 Rglpk rlang tibble tidyr yaml]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; - stratEst = derive2 { name="stratEst"; version="1.0.1"; sha256="1khbhx7mmmaxwsk5lyya9qqi6hvvi5psz1jfb5zdpmyykj09aa95"; depends=[Rcpp RcppArmadillo]; }; stratallo = derive2 { name="stratallo"; version="0.1.0"; sha256="0i8vqhf70x25p9z8amka2aaij7r28d83sp0nijim4n225bdfj6sk"; depends=[]; }; - stratamatch = derive2 { name="stratamatch"; version="0.1.6"; sha256="1f2m2s0n8hhmzw4baf70f0h99mrc52p9n8sm4kmjri7b0brv7779"; depends=[dplyr Hmisc magrittr rlang survival]; }; + stratamatch = derive2 { name="stratamatch"; version="0.1.7"; sha256="0jpdf042gzvg9mhkicpiacbk7kc1r7pvkmk47ja8nzs6icw90pqy"; depends=[dplyr Hmisc magrittr rlang survival]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-6"; sha256="1jlks3g8wpqlpci6v0ryyv93agiabdiklmk6ij0pc5icrfiynbhw"; depends=[]; }; stratifyR = derive2 { name="stratifyR"; version="1.0-2"; sha256="10qlxkdbym206bvl2wc8ig00fvj1n7553vmjk6rs2n4p945qd47g"; depends=[actuar fitdistrplus mc2d triangle zipfR]; }; stratvns = derive2 { name="stratvns"; version="1.1"; sha256="01s3p9mml04pqfd7fydkmqdk0qf5jmzz3b3q3x5vavlma6fv8nwi"; depends=[MultAlloc partitions purrr]; }; straweib = derive2 { name="straweib"; version="1.1"; sha256="0hi59p580yg6rj72grq4jx6grv7lmpi2cimp0rbxhkjpj6i1hav9"; depends=[]; }; + strawr = derive2 { name="strawr"; version="0.0.9"; sha256="1g85hxq3f28di0787ww4d0ai3znsp9d96sp8bwiygs6ff9jx4wkz"; depends=[Rcpp]; }; stray = derive2 { name="stray"; version="0.1.1"; sha256="1pjw1bdkqsp085lrwca1psma95ncapfz8a5iampxgghydkhh3dm8"; depends=[colorspace FNN ggplot2 ks pcaPP]; }; - stream = derive2 { name="stream"; version="1.4-0"; sha256="0rn3xrsx9ysrh955k7jkjhrxsclr1iwwd7k4fsr6klshmjan9qcn"; depends=[BH clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; + stream = derive2 { name="stream"; version="1.5-0"; sha256="1aa9jbqq3nsn511qxcc4gshz04bz7idai2vhz0prvc2lwm4ypvqy"; depends=[BH clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp registry]; }; streamDepletr = derive2 { name="streamDepletr"; version="0.1.1"; sha256="0x7663xz9az8lq852923hr7chaif1iml8drb6ljg83rg55plmwir"; depends=[dplyr magrittr Rmpfr sp]; }; streamMOA = derive2 { name="streamMOA"; version="1.2-3"; sha256="1rh9xplmmwg60v19c7qfjs9w0cv4n9wvcn3narqqq4ky4m7g1ask"; depends=[rJava stream]; }; streamR = derive2 { name="streamR"; version="0.4.5"; sha256="1clx3b0j2515r1nmnl6ki7qw5n54q3x2jvqv3zrc00kq71mlj7ix"; depends=[ndjson RCurl rjson]; }; @@ -16079,18 +16744,20 @@ in with self; { stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; strex = derive2 { name="strex"; version="1.4.2"; sha256="1m9dr5rv3s33kg2b2lr5lxsmbf6qs0nypxw2yx2hyzhsgq363mbn"; depends=[checkmate magrittr rlang stringi stringr]; }; strider = derive2 { name="strider"; version="1.3"; sha256="114j0qpdyg8rrhj68zq596pgc4h7ja39n0rfxf0x9qg7imhaj1h6"; depends=[BH Rcpp]; }; + string2path = derive2 { name="string2path"; version="0.0.2"; sha256="0593nannl8ypl3rvk2bis9d437rifkajqmcck08kfwsisyyiy3i2"; depends=[tibble]; }; stringb = derive2 { name="stringb"; version="0.1.17"; sha256="0bfwwbg64nzxrx30cndqvdlhanjkx6875lg5dzm9cbwvwg2wbxcn"; depends=[backports]; }; - stringdist = derive2 { name="stringdist"; version="0.9.6.3"; sha256="06rzbgw43vzg496xca82pydf3g2rz6iw6h50ai0prbp9hbwrhvfd"; depends=[]; }; - stringfish = derive2 { name="stringfish"; version="0.15.1"; sha256="0164h7r1ar31491hrjl25snryqgghikwqqvl650m2p0l0ljvd2p3"; depends=[Rcpp RcppParallel]; }; + stringdist = derive2 { name="stringdist"; version="0.9.8"; sha256="1fv1hbdlm8qwx57b2aj50mw0say5k48awzavx65mfk67qp6ddk7g"; depends=[]; }; + stringfish = derive2 { name="stringfish"; version="0.15.2"; sha256="0m8485p1gb5z2n2g5nyr38zixw4iv8xxm7bxspxlxvx6alhn03pn"; depends=[Rcpp RcppParallel]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; - stringi = derive2 { name="stringi"; version="1.5.3"; sha256="0420f7zn5knyyvd3a3xa7059l4kadw0m67rfpivacqn9xn6iwkr2"; depends=[]; }; + stringi = derive2 { name="stringi"; version="1.7.4"; sha256="1mda4612sc573zabsvygnla3vpnf3mql58fc9j450540h6hlwfv2"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.4.0"; sha256="1p9ip7p87gbbg4s6d3d392svvzz2b5dqdq2c8ilgvn4s78nlsq47"; depends=[glue magrittr stringi]; }; + stringx = derive2 { name="stringx"; version="0.2.2"; sha256="166n7npbm60rxffrgvdhdr3l08mdnbk6hyx7srwrjhsxbcgmb5l1"; depends=[stringi]; }; strip = derive2 { name="strip"; version="1.0.0"; sha256="1j3kq6w8k66z45rpd1cgxplpnldzbyqklgs4bnbv906pyd8wk9ak"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; - striprtf = derive2 { name="striprtf"; version="0.5.2"; sha256="1ra6aalalig6drsj26z9s24lmb10zssagqrvgqqi4358zbm8gwcd"; depends=[magrittr Rcpp stringr]; }; - strm = derive2 { name="strm"; version="0.1.1"; sha256="0agl9x5g2y16aasrs4qaid0is5p602yksdwqk2xl8br4xlxdr9yx"; depends=[dplyr knitr magrittr purrr rgdal rlang rmarkdown spatialreg testthat tidyr]; }; + striprtf = derive2 { name="striprtf"; version="0.5.3"; sha256="0dqcsh3fb8j0mmmxvxjl77rryhmrjm7a3scqvk2xkgxk4xq6q316"; depends=[magrittr Rcpp stringr]; }; + strm = derive2 { name="strm"; version="0.1.2"; sha256="09x5h4zgbdqq88xabi7hw506y5jrd26br0233afd46m7c69ayadn"; depends=[dplyr knitr magrittr purrr rgdal rlang rmarkdown spatialreg testthat tidyr]; }; strucchange = derive2 { name="strucchange"; version="1.5-2"; sha256="1y022363a4pp0mnji91sjh1qiyspkh09sybqwj03r9pmwrd7q93x"; depends=[sandwich zoo]; }; - strucchangeRcpp = derive2 { name="strucchangeRcpp"; version="1.5-3-1.0.2"; sha256="09lzyv9v5ylm8bn13s0f231zsfsdfj52cjx0zvfvk35v4pwk3blm"; depends=[Rcpp RcppArmadillo sandwich zoo]; }; + strucchangeRcpp = derive2 { name="strucchangeRcpp"; version="1.5-3-1.0.3"; sha256="14yim9bbyj1cz2gv9kwwm2rsdm2x64jr68fjjidxgb8ywz2vcl4k"; depends=[Rcpp RcppArmadillo sandwich zoo]; }; structree = derive2 { name="structree"; version="1.1.7"; sha256="178x6maghjaw9lkyjr84pq916vbq0ldh5gqia0r0vqs8k8dvna9i"; depends=[lme4 mgcv penalized]; }; strvalidator = derive2 { name="strvalidator"; version="2.3.0"; sha256="0m1nxpvb7hbx9n00mc0ar7ay1sk8h819cmf0r0g323z23axq1kdx"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 MASS plyr scales]; }; stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; @@ -16098,7 +16765,7 @@ in with self; { stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; studentlife = derive2 { name="studentlife"; version="1.1.0"; sha256="1xvlcwg7ckxsm5hb5ax8r3hzdqnx61ax59ini5xc5jrsmir13g67"; depends=[crayon dplyr ggplot2 jsonlite purrr R_utils readr skimr tibble tidyr visdat]; }; studyStrap = derive2 { name="studyStrap"; version="1.0.0"; sha256="0lvzqnq40j0xn74qrj0pqhr8zz34mbhfd7dg8bnadscsvj5ffm4c"; depends=[caret CCA dplyr MatrixCorrelation nnls pls tibble tidyverse]; }; - styler = derive2 { name="styler"; version="1.4.1"; sha256="10fj4cnazicb2z9djbv5pszcmrf7wbzagbjvksffqpdc5vbbbw5x"; depends=[backports cli magrittr purrr R_cache rematch2 rlang rprojroot tibble withr xfun]; }; + styler = derive2 { name="styler"; version="1.6.2"; sha256="0p7p2mh4f469drfn5z4wc4xrg06mpnm9wkw76fghclf8m9vcqbx6"; depends=[backports cli glue magrittr purrr R_cache rematch2 rlang rprojroot tibble withr xfun]; }; stylest = derive2 { name="stylest"; version="0.2.0"; sha256="1c036zsn1gi5vhsz37p56wz1bcr3pwdp2k62j7ikmrrnkcv2w9kz"; depends=[corpus Matrix]; }; stylo = derive2 { name="stylo"; version="0.7.4"; sha256="0vjfpz4bpdrsax7a0gsj9cwddbsayb4n5fr5xskz63lfrjg2ppcb"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; @@ -16127,23 +16794,24 @@ in with self; { sugrrants = derive2 { name="sugrrants"; version="0.2.8"; sha256="08cs74afpkvjh32hlrwbl8sdsi3p0ga4ziw32r9pihs28a060fam"; depends=[dplyr ggplot2 gtable lubridate rlang]; }; sumFREGAT = derive2 { name="sumFREGAT"; version="1.2.1"; sha256="1dpm0qqcf8k881wj972q3sma8zlgskkzrbsmlpc77wcfgsmwqdnm"; depends=[GBJ Matrix seqminer]; }; summariser = derive2 { name="summariser"; version="2.3.0"; sha256="0zliqy8dlcr2yy4ky8k68qn256xvpla8fcv7via19y40bmla37ic"; depends=[dplyr]; }; - summarytools = derive2 { name="summarytools"; version="0.9.9"; sha256="0ig7vgjvldbndwhky1bsi38zifr9ji8xvvfqbfffplac08llvrbr"; depends=[base64enc checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools tibble tidyr]; }; - sunburstR = derive2 { name="sunburstR"; version="2.1.5"; sha256="133d5my4bazw5wkv31h3rsqw0d43nxw94bq2sg8c5n4bqkpsvrhm"; depends=[d3r dplyr htmltools htmlwidgets]; }; + summarytools = derive2 { name="summarytools"; version="1.0.0"; sha256="04qcysfywljnqkcz2b7kzpy0xv3ykkvvb14vnda63z1wvmadyhkn"; depends=[base64enc checkmate dplyr htmltools lubridate magick matrixStats pander pryr rapportools tibble tidyr]; }; + sunburstR = derive2 { name="sunburstR"; version="2.1.6"; sha256="1a8a6scfmr74qfi86nrpli6abhfri60cd6sdb40ywrh9qpshkl81"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.5.0"; sha256="1chkl297km313m89h9mbp7vnpz188fhzz5dn8x5cjkqy0mm6c0qc"; depends=[data_table lubridate magrittr]; }; - sundialr = derive2 { name="sundialr"; version="0.1.4"; sha256="03gvcks5i8fh8x8p4zimn4xz3x8b0ai1wmjyx9zis82rdgaa0pg3"; depends=[Rcpp RcppArmadillo]; }; - supc = derive2 { name="supc"; version="0.2.2"; sha256="0b7safpg766mzi2qiwyyf9wn5pcpcb9w7dn5qb3kjalijvcqz7mp"; depends=[BH Rcpp]; }; + sundialr = derive2 { name="sundialr"; version="0.1.4.1"; sha256="1ln8zbihxfa7dnbhrm254l8qzdw16fhva58p5bd0p8j43grq6qrv"; depends=[Rcpp RcppArmadillo]; }; + supc = derive2 { name="supc"; version="0.2.4"; sha256="10plwksz3bla70vgs4p7max9hcv85l1dx4wsg90rjmfpxrjcfwny"; depends=[BH Rcpp]; }; supclust = derive2 { name="supclust"; version="1.1-0"; sha256="08pdd8azvd5c7cs62dh3wp7jvcwcwcjyy73r4ki2a0pw68fhkn9y"; depends=[class rpart]; }; supcluster = derive2 { name="supcluster"; version="1.0"; sha256="1rkd4bpzzvzbmqaj907pqv53hxcgic0jklbsf5iayf0ra768b5w6"; depends=[gtools mvtnorm]; }; superMDS = derive2 { name="superMDS"; version="1.0.2"; sha256="0jxbwm3izk7bc3bd01ygisn6ihnapg9k5lr6nbkr96d3blpikk04"; depends=[]; }; - superb = derive2 { name="superb"; version="0.9.5.0"; sha256="09yjrpv6ybf3f2p9wipp60nl16c5jhg915rclr821lncwgwzbsv9"; depends=[ggplot2 lsr MASS plyr Rdpack]; }; - superbiclust = derive2 { name="superbiclust"; version="1.1"; sha256="1gzjbzbl8y1nzdfhyd6dlrwjq8mwj43a26qav84s1bdzwx6dra48"; depends=[biclust fabia Matrix]; }; + superb = derive2 { name="superb"; version="0.9.7.5"; sha256="0zd853lb63jwgw1d6sdibb58wpayx0gbja42nm6nsaj0220mg2cy"; depends=[foreign ggplot2 lsr MASS plyr psych Rdpack referenceIntervals shiny shinyBS stringr]; }; + superbiclust = derive2 { name="superbiclust"; version="1.2"; sha256="0mk3d820skp99hl8ilwic2fz90yb9dwy2jq3vfjb726gj1qich3b"; depends=[biclust fabia Matrix]; }; superdiag = derive2 { name="superdiag"; version="2.0"; sha256="0zfy9ain6agh276av0p66mks3rap42n8yma0dr6qbc14z3nh8w0m"; depends=[coda]; }; superheat = derive2 { name="superheat"; version="0.1.0"; sha256="01v8s6px1k5fajlm6py3ksr1i853kwwlky1yryzhy3p1cxhwgg83"; depends=[dplyr ggdendro ggplot2 gtable magrittr plyr scales]; }; superml = derive2 { name="superml"; version="0.5.3"; sha256="1k0hcjspv0q6wg0yarvgjs7ql7d587nijicmz3lfhpph2n3hghvb"; depends=[assertthat BH data_table Metrics R6 Rcpp RcppArmadillo]; }; - supernova = derive2 { name="supernova"; version="2.4.0"; sha256="1qxa0yand1k323f56c4lzynma9mnavdvjdp8zcf0dzg282w43s32"; depends=[cli ggplot2 magrittr pillar purrr rlang stringr tibble vctrs]; }; + supernova = derive2 { name="supernova"; version="2.4.2"; sha256="0xbly0jbzhffd3zrgp1rnlr7miyzwk6zagw7lbnhn5l4nq9n6hx7"; depends=[backports cli ggplot2 magrittr pillar purrr rlang stringr tibble vctrs]; }; superpc = derive2 { name="superpc"; version="1.12"; sha256="0n68qafsww00q0wx37ms3rimrlhbp085ywvv2k5vw951j4z8ivfb"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; - suppdata = derive2 { name="suppdata"; version="1.1-6"; sha256="0iq3rghynqxljrw2lqp102qs3w4wizj7j8pp5rf1bki7m6y8h19k"; depends=[httr jsonlite rcrossref xml2]; }; + suppdata = derive2 { name="suppdata"; version="1.1-7"; sha256="1kga3jczxa9wjazl7gcks2p521y7c2y1518v7wk48sm7yri6sm4p"; depends=[httr jsonlite rcrossref xml2]; }; + support = derive2 { name="support"; version="0.1.5"; sha256="0gs6mva1lwanq4rm8l70sid28if2l0k249ydirqkz72lz12hg1br"; depends=[BH MHadaptive nloptr randtoolbox Rcpp RcppArmadillo]; }; support_BWS = derive2 { name="support.BWS"; version="0.4-3"; sha256="19k14p28f85j7bm4ya0s2a9813m2p1p3x5h4fp1hg47rdgwxzb4n"; depends=[]; }; support_BWS2 = derive2 { name="support.BWS2"; version="0.3-0"; sha256="0k9yvg0n4lzsq43r53r9f70hq1q3zfljjafj9ds2p3c6qzgs9chi"; depends=[]; }; support_BWS3 = derive2 { name="support.BWS3"; version="0.2-0"; sha256="012kcvscz7m2is92r71731zc7xnp7pwyx30vivwjazrigp9bq1kl"; depends=[]; }; @@ -16172,7 +16840,7 @@ in with self; { survMS = derive2 { name="survMS"; version="0.0.1"; sha256="0313pwf0l6wq9l4qjj1al9ybzm79kdxwzdrw6k0af706rxfzzha0"; depends=[ggplot2]; }; survMisc = derive2 { name="survMisc"; version="0.5.5"; sha256="00nvvl8gz4477ab24rd0xvfksm8msv8h021b9ld5c9cizc41n2bm"; depends=[data_table ggplot2 gridExtra km_ci KMsurv knitr survival xtable zoo]; }; survParamSim = derive2 { name="survParamSim"; version="0.1.5"; sha256="0jk4dwxm2q0sckjx3njadjhpk4hym817xn2r555cl1vd1x9xpqjy"; depends=[broom dplyr forcats ggplot2 lifecycle magrittr mvtnorm purrr rlang survival tibble tidyr]; }; - survPen = derive2 { name="survPen"; version="1.5.1"; sha256="0c1lnkl7sc1967y86g4y9an13bqiv62pxiwz496xdhbzvwliqh31"; depends=[Rcpp RcppEigen statmod]; }; + survPen = derive2 { name="survPen"; version="1.5.2"; sha256="1mmz7bbl1l0pkpgi8jqfdpq33yqa6c2442g3q7cqlyy1s7p1dcd9"; depends=[Rcpp RcppEigen statmod]; }; survPresmooth = derive2 { name="survPresmooth"; version="1.1-10"; sha256="0m1037v857g140lypck5zq2zf52rkdxzaqlj9kjn7h7lp6gif6ia"; depends=[]; }; survRM2 = derive2 { name="survRM2"; version="1.0-3"; sha256="1x526ax39xx4zbhr6bdzphj4sljnl070vm0qh1479r1gj0vmmhif"; depends=[survival]; }; survRM2adapt = derive2 { name="survRM2adapt"; version="1.0-1"; sha256="1r3jvjbc2sb7b00s95b3sdx4d99rmrnd573fx1n4914ydiggi9nn"; depends=[survival]; }; @@ -16183,27 +16851,28 @@ in with self; { survSpearman = derive2 { name="survSpearman"; version="1.0.0"; sha256="06xric3fwv2rdrbapsawrg288s2sflzrbx1a4yc7lzxzxbsbs619"; depends=[]; }; surveillance = derive2 { name="surveillance"; version="1.19.1"; sha256="1665n26qs79b3hj4wdp13qjr13w6g32jvbpc4qpcn39bgql6i599"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat spatstat_geom xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; - survey = derive2 { name="survey"; version="4.0"; sha256="1q9x0s86s72gl43zj49gypg6jj2b78xjvxr4lmy5147s9h7z8lxh"; depends=[lattice Matrix minqa mitools numDeriv survival]; }; + survey = derive2 { name="survey"; version="4.1-1"; sha256="0ljsszybzri531q6xab04r6zq11vchfs7y0snjzk57m3g0b9ms05"; depends=[lattice Matrix minqa mitools numDeriv survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; surveydata = derive2 { name="surveydata"; version="0.2.6"; sha256="1z72l9dzdhg2r7wd284wa569f4bcnqhz6lha1lch1am7g2i3633d"; depends=[assertthat dplyr DT ggplot2 magrittr purrr rlang scales tidyr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; surveyoutliers = derive2 { name="surveyoutliers"; version="0.1"; sha256="03nqw0zir3x57gg23hgsr2s99pv958kfsygqfwly96rvfdhr5p3v"; depends=[]; }; surveyplanning = derive2 { name="surveyplanning"; version="4.0"; sha256="19ydgcwyvkhknf4qmlw7j25skcj9a4rd6s8j5n7bdqpljl60zync"; depends=[data_table laeken]; }; surveysd = derive2 { name="surveysd"; version="1.3.0"; sha256="0d5xjdlccqaa1h437rz5zq6a829rpz426m55jgprhfpcps1wfhbk"; depends=[data_table ggplot2 laeken Rcpp]; }; - survidm = derive2 { name="survidm"; version="1.3.1"; sha256="0ymjc59l3vk2w3bwn3md79a9x90cy2hzhdpkq294c27pp24y742c"; depends=[doParallel doRNG foreach ggplot2 gridExtra KernSmooth np plotly Rcpp survival TPmsm]; }; - survival = derive2 { name="survival"; version="3.2-11"; sha256="0w0gkni1w8rbmfw7yl08bl1s9lij1yhbkj4dvmxcarkkw26sjjzs"; depends=[Matrix]; }; + survidm = derive2 { name="survidm"; version="1.3.2"; sha256="0ass7ffpk70ph7dcdjm2f6xyzqaavlkhr1pcij2vcasiy4v1vyiv"; depends=[doParallel doRNG foreach ggplot2 gridExtra KernSmooth np plotly Rcpp survival TPmsm]; }; + survival = derive2 { name="survival"; version="3.2-13"; sha256="0zrikancm9shixvgng89f1610sphlwljczi0fnjbdqn4l85rrarz"; depends=[Matrix]; }; survivalAnalysis = derive2 { name="survivalAnalysis"; version="0.2.0"; sha256="1sx7xjqkwc3788j0520kgv602m3gdlmpg1ps9fm8lhsjb8dmvlya"; depends=[cowplot dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales stringr survival survminer tibble tidyr tidytidbits]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalMPLdc = derive2 { name="survivalMPLdc"; version="0.1.1"; sha256="1wqlzpwm1p7nq19l3d7c93zv6fnn0b1w24kak9zwsgyhar3f5lv9"; depends=[copula matrixcalc splines2 survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; - survivalmodels = derive2 { name="survivalmodels"; version="0.1.8"; sha256="0dsssvlry07559f17wdlkm1l6cbsng529xmakmwa2nkfm451qjqj"; depends=[Rcpp]; }; + survivalmodels = derive2 { name="survivalmodels"; version="0.1.9"; sha256="13plpgvxlljd953kv0krzzs1rfgl4yv9s7s5naplqfzjrapk0j7z"; depends=[Rcpp]; }; survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; - survivoR = derive2 { name="survivoR"; version="0.9.2"; sha256="0g2clj1znpfv62zzxbhfiypj5bggnc2nqbr3bb5lbz5zssxfqrjs"; depends=[dplyr forcats ggplot2 glue magrittr stringr tidyr]; }; + survivoR = derive2 { name="survivoR"; version="0.9.4"; sha256="1swvlxsj4msa82c6cnfx0g5w6c3b592czc14c4barx028qj40sph"; depends=[dplyr ggplot2 magrittr stringr tidyr]; }; survminer = derive2 { name="survminer"; version="0.4.9"; sha256="0byh0wxdbjfwdrzsnqv4xlmnik6lj0vkkzfxy7lssk8dv5zmj7nz"; depends=[broom dplyr ggplot2 ggpubr ggtext gridExtra magrittr maxstat purrr rlang scales survival survMisc tibble tidyr]; }; survmixer = derive2 { name="survmixer"; version="1.3"; sha256="00s06h7nn8li4d2kn4yzlnj3px1wkpvnx5w73y98cvrcwm0ad71g"; depends=[]; }; - survsim = derive2 { name="survsim"; version="1.1.5"; sha256="0194w1h3v4p546wibp3xyhy2r84w3p9r6ggzhlf11v8467mjy0l9"; depends=[eha statmod]; }; + survsim = derive2 { name="survsim"; version="1.1.6"; sha256="1n6k8ha8nqgfr3cqr2cmzfga439hv3pzc1imy7h96y1qxg4wqwzx"; depends=[eha statmod]; }; survtmle = derive2 { name="survtmle"; version="1.1.1"; sha256="1l13rvwq4915ij2a55fxdj3b3wkgjca1fbqzcgkjlpzkcn97k1nj"; depends=[dplyr ggplot2 ggsci Matrix plyr speedglm stringr SuperLearner tidyr]; }; survxai = derive2 { name="survxai"; version="0.2.2"; sha256="09ig561754kjzpay2hy3n62zlk0bgwkjy8vnslrr428r8m1lj0qr"; depends=[breakDown ggplot2 pec prodlim scales survival survminer]; }; + susieR = derive2 { name="susieR"; version="0.11.42"; sha256="1x5rk0yi7232bmdkq17sv5gwk7w8mhs15mmix5n7zc3d0al1p7yh"; depends=[ggplot2 Matrix mixsqp reshape]; }; sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; }; svDialogs = derive2 { name="svDialogs"; version="1.0.3"; sha256="0j00xjvkwv992ir48czhvyj29rb9vpd243vbyyj2binn0q0qa431"; depends=[rstudioapi svGUI]; }; svDialogstcltk = derive2 { name="svDialogstcltk"; version="0.9-4"; sha256="16166f8i6nsg7palqmnlp5b9s91d6ja9n0zm6rcvd2fwnw2ljkr4"; depends=[svDialogs svGUI]; }; @@ -16212,12 +16881,12 @@ in with self; { svIDE = derive2 { name="svIDE"; version="0.9-54"; sha256="1a03xpjx22xhxfqkgcm1pmal0dlp544hvnckj0p6sy4y56hmsfik"; depends=[svMisc XML]; }; svKomodo = derive2 { name="svKomodo"; version="0.9-63"; sha256="0x2774lhckhg8kw6plsn6dpks3b3fisb0psa03p7di7jx8vrkg5n"; depends=[svMisc]; }; svMisc = derive2 { name="svMisc"; version="1.1.4"; sha256="0y8mhiblyzwads4gf4whmxi7c6wdmqs3ahbj132l79bbdk40p83a"; depends=[]; }; - svSocket = derive2 { name="svSocket"; version="1.0.1"; sha256="1d4kp095r2vpdji2wji5al5ff1lzky817qh4id9fdbi1kiif97jz"; depends=[svMisc]; }; + svSocket = derive2 { name="svSocket"; version="1.0.2"; sha256="1gzh1a64cg4mrjmdn4s35kl1fmhbaykk26lfmykqfhb10ldzr7qj"; depends=[svMisc]; }; svSweave = derive2 { name="svSweave"; version="0.9-8"; sha256="0zkng8lwdpjdbic9f6jnk2ndxbch2kjyz71ds1bksvd3kmk03lks"; depends=[knitr]; }; svTools = derive2 { name="svTools"; version="0.9-5"; sha256="040wr8cr2p35x6pr515bprmsw8ysajx4df5f2njz3ily61xf9szi"; depends=[codetools svMisc]; }; svUnit = derive2 { name="svUnit"; version="1.0.6"; sha256="08nmlbdrmmz04ira30721l99i74w07w2avdr4pypswf2sq1nqgi6"; depends=[]; }; svWidgets = derive2 { name="svWidgets"; version="0.9-45"; sha256="08cpsy4abypjnv33arsgxk5i0gpdvdzj60wa1b22ca1n7d35mc80"; depends=[svMisc]; }; - svars = derive2 { name="svars"; version="1.3.7"; sha256="0dfq2bbfdkksbpv4rn096h754s389badcz70lr6kg3byhfxx9kaa"; depends=[clue copula DEoptim expm ggplot2 pbapply Rcpp RcppArmadillo reshape2 steadyICA strucchange vars zoo]; }; + svars = derive2 { name="svars"; version="1.3.8"; sha256="0ncr944lkb6w3xnkrcz0pigda98yif8psqy9mr4f5pcgv4nwcf01"; depends=[clue copula DEoptim expm ggplot2 pbapply Rcpp RcppArmadillo reshape2 steadyICA strucchange vars zoo]; }; svd = derive2 { name="svd"; version="0.5"; sha256="18bi42pgml9i8jflfk29ws0bfblkj3f69z9p9mkd0m8kcx4d8hnh"; depends=[]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; }; @@ -16230,7 +16899,6 @@ in with self; { svplots = derive2 { name="svplots"; version="0.1.0"; sha256="0fa3mnsdaz85dy7rr6w454z516simj1zrf08sfbm05rp6jr3c7ws"; depends=[ggplot2]; }; svrpath = derive2 { name="svrpath"; version="0.1.2"; sha256="18h40555jmqpbsnhlwkvc5fl7d0r2bgscdv8amjvhjxmx9y952a2"; depends=[quadprog svmpath]; }; svs = derive2 { name="svs"; version="3.0.0"; sha256="1jn3dbaqpgydkwf9y7hq97nva26vvrpl9zmw2bw4ky1qgzgz1ypb"; depends=[gtools Matrix]; }; - svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; svyVGAM = derive2 { name="svyVGAM"; version="1.0"; sha256="1dq6rmk3sqpgm7q1chsvwjhc2lfsrgd4isgpxc907w5waqk91n16"; depends=[survey VGAM]; }; svydiags = derive2 { name="svydiags"; version="0.3"; sha256="0xgizswdqs8cjac200sqv3ygvrnbcy74h92kgx4r6nv1fhlcljl3"; depends=[MASS Matrix survey]; }; swCRTdesign = derive2 { name="swCRTdesign"; version="3.1"; sha256="18ln02fnxkpjqi8a36wr2qr427hxrghkhfjx0384grmdg1mmkbf5"; depends=[]; }; @@ -16240,28 +16908,29 @@ in with self; { swamp = derive2 { name="swamp"; version="1.5.1"; sha256="1mj6cqrc19p07v051fg6ikhhbccsg2lvz7wjiakaswqqm0269843"; depends=[amap gplots impute MASS]; }; swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; swdft = derive2 { name="swdft"; version="1.0.0"; sha256="0529rw8nsl48hwiy741alvrzg5d5q1nhnjshrsfwchm5kdv0igva"; depends=[]; }; - swdpwr = derive2 { name="swdpwr"; version="1.4"; sha256="0qwpkvxhkv9jf7n312jixf058h3l5hlpygr9cy6l2p148y79gcid"; depends=[]; }; + swdpwr = derive2 { name="swdpwr"; version="1.5"; sha256="1pik0m1gc9y70j2w5lvl7ndc300ywh26qzv1ab3raprj2nir86yx"; depends=[]; }; sweep = derive2 { name="sweep"; version="0.2.3"; sha256="1705mcp9p5h50ifqjjwx61z5wl5izv889nxcgdkx1i0dlcr61l2a"; depends=[broom dplyr forecast lubridate rlang tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.2"; sha256="0zzjvwd60w9b5ybsb72aqa42sx6al4ymr591j3zryxgpl6rms5rh"; depends=[checkmate lubridate stringr]; }; swephR = derive2 { name="swephR"; version="0.3.0"; sha256="0fk5wih3i5vpkcc9y1n30xwc1hyqgfgnad9jkdgdx0m31pn1y9j5"; depends=[Rcpp]; }; swfscAirDAS = derive2 { name="swfscAirDAS"; version="0.2.2"; sha256="0xj2r0hv755kqjn4awkf16d24vkmfny6b1xa7ia07pdc25iggrgm"; depends=[dplyr lubridate magrittr readr rlang stringr swfscDAS swfscMisc tidyr]; }; - swfscDAS = derive2 { name="swfscDAS"; version="0.5.0"; sha256="1x1jv3vn8qsrdinm0yhpfyisxfwgw1bn0ykbf0dx8482n3lj2sjr"; depends=[dplyr lubridate magrittr purrr readr rlang sf swfscMisc tidyr]; }; - swfscMisc = derive2 { name="swfscMisc"; version="1.4.3"; sha256="1ywmi7m8kmd0jy6jkri70rdpqnb16h1mjy0km4c8rn4knmjy6fbi"; depends=[dplyr ggplot2 ggrepel kknn magrittr mapdata maps rlang sf spatstat_geom tibble tidyr]; }; + swfscDAS = derive2 { name="swfscDAS"; version="0.6.0"; sha256="0v3xjshxqfblmsl21265085m2dygf56083mgiqayp23bs1kl9bj7"; depends=[dplyr lubridate magrittr purrr readr rlang sf swfscMisc tidyr]; }; + swfscMisc = derive2 { name="swfscMisc"; version="1.5"; sha256="1j762xf9b8clvc3m89s1y3lz5cn8a43wphhfd1wa2f5k1bw3bqd5"; depends=[dplyr ggplot2 ggrepel kknn magrittr mapdata maps rlang sf spatstat_geom tibble tidyr]; }; swgee = derive2 { name="swgee"; version="1.4"; sha256="1a6zr4nkpj52b0rk01qbwzi8y0c798wlxzw69wyyv576k148rgfq"; depends=[gee geepack mvtnorm]; }; swimplot = derive2 { name="swimplot"; version="1.2.0"; sha256="02w1l67hvz8gha8gcqxcvcr8g2azidn6bvw76h3k75p9rvq8sgpp"; depends=[dplyr ggplot2 tidyr]; }; swirl = derive2 { name="swirl"; version="2.4.5"; sha256="0cqyn2rnqfkb2wza4zdr1kcms5l0igbq79xh5i7765agdday2z9w"; depends=[digest httr RCurl stringr testthat yaml]; }; swirlify = derive2 { name="swirlify"; version="0.5.3"; sha256="1bpg6yz2adgspjlwsf2q83j1bq0iyvp9938smgc41861nsclngwr"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; swissMrP = derive2 { name="swissMrP"; version="0.62"; sha256="1vy6h6c4v49zlsli77ilj4df8cfh67rqmki71v6j1aqw6kf3b649"; depends=[arm blme lme4 maptools sp]; }; + swissdd = derive2 { name="swissdd"; version="1.1.4"; sha256="0ad260b4sfism5q1jxjazg6q33283ncld1m7gfdrps3xg1kyfirs"; depends=[dplyr ggplot2 httr jsonlite lubridate purrr RCurl sf stringr tibble tidyr]; }; swissparl = derive2 { name="swissparl"; version="0.2.1"; sha256="0181ls1gw68kfz3yqf8m2nwhah87i9m164rlbycy1kxq9adi93cs"; depends=[crayon dplyr ggplot2 httr jsonlite lubridate magrittr purrr stringr tibble tidyr]; }; switchcase = derive2 { name="switchcase"; version="0.1.1"; sha256="0h31nzyf7dzalgl65cw0k1fxylbmx78l45r5id2wcqdym23dv9a9"; depends=[]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; switchr = derive2 { name="switchr"; version="0.14.3"; sha256="1aw9n6hh62qvggl1flpxfyqgp4sj6vj1mlfqfhx923hl53c7cr31"; depends=[RCurl RJSONIO]; }; swmmr = derive2 { name="swmmr"; version="0.9.1"; sha256="140sx0y00ngxsyn7n1l0aay7vk2jk8hf81aiwh46k761cpc5y28d"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; - sybil = derive2 { name="sybil"; version="2.1.5"; sha256="1biy1cc87g7adfglzp2mq6ca5sfp1ljq087id0xqdmrwz0650maq"; depends=[lattice Matrix]; }; + sybil = derive2 { name="sybil"; version="2.2.0"; sha256="05ccq2m4z6akslymdm2vd3x99pi9z0ha1xcnhwvwcvibhqn9hmd5"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.2"; sha256="0351qlvyynygjf43q93gkqzzaff3v6gynvbks1ix1mank3afn226"; depends=[sybil]; }; sybilccFBA = derive2 { name="sybilccFBA"; version="3.0.1"; sha256="1y94d6ajf0l492nrd8wsz3b6x724zcyhipasgyx65nx3sgha6yp8"; depends=[Matrix sybil]; }; sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.2"; sha256="0s8yqzn7llzby5v1p7is7qv0m8dzwf14r3m32slf898nxrs131xr"; depends=[MASS Matrix sybil]; }; - sylcount = derive2 { name="sylcount"; version="0.2-2"; sha256="0cncj0nszfw98i94sb3sqdzdxdqjs523kmbqxz6cvvph1s77aama"; depends=[]; }; + sylcount = derive2 { name="sylcount"; version="0.2-3"; sha256="0ljikwlzscgwbza7z634zn726zv9bxa4j931sx8r6z01gfv3z94j"; depends=[]; }; syllabifyr = derive2 { name="syllabifyr"; version="0.1.1"; sha256="1z61afxx2bm37hxvv1fl3x7ibhkp3h1ivl3k9prqzsaw4j592vfx"; depends=[dplyr purrr stringr tibble tidyr]; }; sylly = derive2 { name="sylly"; version="0.1-6"; sha256="0f03k9d15fkym14y94jb7rkh228blc76jlm7pk229b44hcbh3mmm"; depends=[]; }; sylly_en = derive2 { name="sylly.en"; version="0.1-3"; sha256="0jw48qin172vv7skcpvcpi9wzgav5l9afzb09hhgcxvivbz6dl93"; depends=[sylly]; }; @@ -16273,12 +16942,13 @@ in with self; { symengine = derive2 { name="symengine"; version="0.1.5"; sha256="1n8gxazjfjfas8463qa00zs6ww1vzv059d9aakvh1pads24l8v6l"; depends=[Rcpp]; }; symmetry = derive2 { name="symmetry"; version="0.2.1"; sha256="041vxbva5kaywpn4y7kjwlc2cj56iyvd51iv5198dv280jfcnjv9"; depends=[Rcpp RcppArmadillo Rdpack]; }; symmoments = derive2 { name="symmoments"; version="1.2.1"; sha256="0wl68nsvydfhlbyaj54alj31dphqigyp1s4h2xdapxj4zvwf2sws"; depends=[combinat cubature multipol mvtnorm]; }; + symphony = derive2 { name="symphony"; version="0.1.0"; sha256="0pwl9ahiv0xxc7j6448cja77fvcng28gdwhhr1z0qmhjsdcxadxq"; depends=[class data_table dplyr ggplot2 ggrastr ggrepel harmony irlba magrittr Matrix purrr RANN RColorBrewer Rcpp RcppArmadillo rlang tibble tidyr uwot]; }; syn = derive2 { name="syn"; version="0.1.0"; sha256="12apdjbsazwfxizsw4dj0y3vkdjmki8dzpyv3bi9gnhpysdd1jzx"; depends=[]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; synchronicity = derive2 { name="synchronicity"; version="1.3.5"; sha256="1kgsk64aifjm3mfj102y3va7x1abypq2zi0cqbnjhl8fqyzp69hx"; depends=[BH bigmemory_sri Rcpp uuid]; }; synchrony = derive2 { name="synchrony"; version="0.3.8"; sha256="1zpxg4dkxnvafiyp0j00wig5ymj10bzfg2376x56rzpnabhg57hi"; depends=[]; }; synfd = derive2 { name="synfd"; version="0.1.3"; sha256="1h8vfrfw00449vjbj6z4y7m5p7rxzvqjcykyxw5sb473f63gr5px"; depends=[L1pack Rdpack]; }; - synlik = derive2 { name="synlik"; version="0.1.2"; sha256="1pscfqg5x7wpq3vp1i7fy29dwa7cw5g3kzxinanwrwbcznv9nyms"; depends=[Matrix Rcpp RcppArmadillo]; }; + synlik = derive2 { name="synlik"; version="0.1.4"; sha256="009kw0cx49jvm9giw2hp8lv72rf69q7h5d4gjigp2bsx309yfzcs"; depends=[Matrix Rcpp RcppArmadillo]; }; synoptReg = derive2 { name="synoptReg"; version="1.2.1"; sha256="1v282ag4275p5lm6yvzwkpndrf4cnrpn0rw3v6mh5hxnb2pbmjl5"; depends=[dplyr ggplot2 kohonen lubridate magrittr metR raster rnaturalearth rnaturalearthdata RNCEP sf stringr tibble tidyr]; }; syntaxr = derive2 { name="syntaxr"; version="0.8.0"; sha256="1iik9b3x9jx7w31j7hyi3sixg30l5a6w40svhqj1xlchsk60yykn"; depends=[magrittr]; }; synthACS = derive2 { name="synthACS"; version="1.6.0"; sha256="0dwcx2c284fa9d0y7kpai3jpby3drriw9bxbjld8v6lz7af6d9mw"; depends=[acs data_table Rcpp]; }; @@ -16286,73 +16956,80 @@ in with self; { synthesisr = derive2 { name="synthesisr"; version="0.3.0"; sha256="0b50d5hfkscggn2f6h8wyljkar08r8cbc0a4l12f809w5hdnjc63"; depends=[stringdist]; }; synthpop = derive2 { name="synthpop"; version="1.6-0"; sha256="0yknpisl81r87afijnjz5za0j6nn135mhrbpa9dva3c0dzamnhms"; depends=[classInt foreign ggplot2 lattice MASS mipfp nnet party plyr polspline proto randomForest ranger rpart]; }; sys = derive2 { name="sys"; version="3.4"; sha256="11q4zmx62w44p1j34frwmrsp23mc7l4n354i0zyziw92yax8zy0p"; depends=[]; }; - sysfonts = derive2 { name="sysfonts"; version="0.8.3"; sha256="00kbazxw6zd1kakfshffdj928krca53bw9k78k0zar40mbqxiwd5"; depends=[]; }; + sysfonts = derive2 { name="sysfonts"; version="0.8.5"; sha256="1fhf0x5sqx3mv72j9d0clkq1qzqiqxbxn1h808f7ccf0mb04v43y"; depends=[]; }; sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; syslognet = derive2 { name="syslognet"; version="0.1.2.1"; sha256="0nwni2mn7w43pfasqa2dwy1l6r0ymlkwlsyd5q47fajdr8v1ir0q"; depends=[]; }; systemfit = derive2 { name="systemfit"; version="1.1-24"; sha256="180ah91i98gjswpbkkdjgnc2c9rz3pl5bw035iks92nd5vl6w5wz"; depends=[car lmtest MASS Matrix sandwich]; }; - systemfonts = derive2 { name="systemfonts"; version="1.0.1"; sha256="15x7qx8iigkybgz6b6s66i3mh75vgynzpd50nw05wflfwzcv87a0"; depends=[cpp11]; }; + systemfonts = derive2 { name="systemfonts"; version="1.0.2"; sha256="1a9nzd4nqawr6ni3mw7xc2yq77fb2f91aarnc906mq26510rdb11"; depends=[cpp11]; }; systemicrisk = derive2 { name="systemicrisk"; version="0.4.2"; sha256="021ypw9fag5kmk2q041pj2jfzgfg640yda7wvh0yzdmg73p6fvsw"; depends=[lpSolve Rcpp]; }; syt = derive2 { name="syt"; version="0.2.0"; sha256="1pfl3d6laa075z88fqgjnrsn21lgjsak0bjdws09b9knc0ifgfsz"; depends=[Matrix partitions]; }; syuzhet = derive2 { name="syuzhet"; version="1.0.6"; sha256="16iccqdbw02iw82nah6kwz3gwfghi864j2y698n4b9dyc386ijzv"; depends=[dplyr dtt NLP rlang textshape tidyr zoo]; }; + tLagPropOdds = derive2 { name="tLagPropOdds"; version="1.0"; sha256="15h9b3mrw847ag8g3csizk6az3ibnf55nznyj48lkndbfji0icd8"; depends=[dplyr R_utils survival]; }; + tRnslate = derive2 { name="tRnslate"; version="0.0.3"; sha256="0sm0cqxylsxmnhqs1c8w81d6q2sj7nmm86mds59kiyspy9m67sbc"; depends=[]; }; tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.7"; sha256="1j06rc5s6jpz8i116m98ygc75sx6lk8jd9gw6fb8q342mbbmqh8h"; depends=[coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; }; tTOlr = derive2 { name="tTOlr"; version="0.2"; sha256="1fk33vp6y65mls1iczjf63wzj1rl1knbdcbd4rnqqfdcqhibb3p3"; depends=[lattice latticeExtra]; }; taRifx = derive2 { name="taRifx"; version="1.0.6.2"; sha256="05cvjsi65fvy9hg2v3fldzwn1yd2kfirl3ffg9yfajm903dk3l49"; depends=[plyr reshape2]; }; - tab = derive2 { name="tab"; version="4.1.1"; sha256="0ds8n6gncidb66in7hlqkcmil5yfsf7ihqvmls789hrm2iz9xlfm"; depends=[dplyr gee knitr MASS survey survival xtable]; }; + tab = derive2 { name="tab"; version="5.1.1"; sha256="1kg8c1safi9klkx2mdkmsf5dn9piy4jljwd4ma7g4jz2rwl4jzhv"; depends=[dplyr kableExtra knitr MASS survey]; }; taber = derive2 { name="taber"; version="0.1.2"; sha256="0cib8fsib4q8nf18vcpailvkplf57cm8fshb09clxm3zcp8j9c17"; depends=[dplyr magrittr]; }; tabit = derive2 { name="tabit"; version="0.2.1"; sha256="0jy95jpbzj4rgaxmm6ki9wr0cl1w13pygq3yavdccjr82mayfpvc"; depends=[]; }; tablaxlsx = derive2 { name="tablaxlsx"; version="1.2.4"; sha256="19yg8m264f1hjsi8b7zxjpbvlaz2jrxj2bd9nv95g52dvlysg4nk"; depends=[openxlsx]; }; table_express = derive2 { name="table.express"; version="0.3.1"; sha256="00f5xi2dkx1h0mv8ld3ds15w30d9vgvmjrldg43z7zskprshqsxx"; depends=[data_table dplyr magrittr R6 rlang tidyselect]; }; table_glue = derive2 { name="table.glue"; version="0.0.2"; sha256="01yskmc604jdy6givddm0nhr9ylf7p68v2xz1p2mqylhws1lszph"; depends=[glue stringi]; }; - table1 = derive2 { name="table1"; version="1.4"; sha256="1smqmbdnvwjklc2bblpklz7hjzww71yc2lrksjhl6ibmd6fdpc9f"; depends=[Formula htmltools knitr yaml]; }; + table1 = derive2 { name="table1"; version="1.4.2"; sha256="1cw85nj6w9fk66wjbyz08ya6g027cfj3brb0sx7ar0n7zyc8rhb4"; depends=[Formula htmltools knitr yaml]; }; table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; }; tableHTML = derive2 { name="tableHTML"; version="2.1.0"; sha256="01bffjqi2qs66w67l5nc0imqdcaf4cky930srkd2wmvvawv85kwc"; depends=[htmltools jpeg magrittr png shiny webshot]; }; tableMatrix = derive2 { name="tableMatrix"; version="0.82.0"; sha256="1sskijhbqakamrk2rv7v5zpjsdi8jw0jl2z96l0vhsvsiq0cz1c8"; depends=[data_table]; }; - tableone = derive2 { name="tableone"; version="0.12.0"; sha256="0pjpsdizpvqn7anyg95d4i7sf6qyqh7svp4a5gsch0r3gmpw2p3a"; depends=[e1071 gmodels labelled MASS nlme survey zoo]; }; + tableone = derive2 { name="tableone"; version="0.13.0"; sha256="0ihk29gcbqvvif2y8aalgnpq8y87irrp8z6ik4iaxh2xb6ksawqw"; depends=[e1071 gmodels labelled MASS nlme survey zoo]; }; tablerDash = derive2 { name="tablerDash"; version="0.1.0"; sha256="1mnp6lxa7d669r325aynq1n3f35r9sy4v1fvdh4cymbf33s8mkmm"; depends=[htmltools knitr shiny]; }; tables = derive2 { name="tables"; version="0.9.6"; sha256="1y0gnqd2q0gn1dr2nxdlsvyl4g5jnj9y9lx18bhvhrfzb5038j5w"; depends=[htmltools knitr]; }; tableschema_r = derive2 { name="tableschema.r"; version="1.1.1"; sha256="14cnbijxdhf7qbsiqbk8p516mfh9bgdbcg32vn5pycsp30k78b2h"; depends=[config future httr iterators jsonlite jsonvalidate lubridate purrr R6 RCurl rlist stringr urltools]; }; - tablesgg = derive2 { name="tablesgg"; version="0.7-1"; sha256="0zzcml97a9q98a999sb9hjyrkickkymhsppkxhxax32yf1h5x2kr"; depends=[ggplot2 tables]; }; - tablet = derive2 { name="tablet"; version="0.2.7"; sha256="0nbay0yijmrrpf7h7djcxrqrlimysrn0ff8n1gkmg9b1cagbqbg7"; depends=[dplyr kableExtra rlang tidyr]; }; - tabnet = derive2 { name="tabnet"; version="0.1.0"; sha256="0bz6rba8sb84w3kdas0gxl5xvlk4s1iswd1bfdwpx2l7pfq50jq3"; depends=[glue hardhat magrittr progress rlang tibble torch vctrs]; }; + tablesgg = derive2 { name="tablesgg"; version="0.8-1"; sha256="0vkl9386qnalr5d0libqs2ihszggs0qyx6ffyjn8j8ab3kczzxhr"; depends=[ggplot2 tables]; }; + tablet = derive2 { name="tablet"; version="0.4.0"; sha256="02s64ckm36k5q8vkpx231jb41pw968my3q00m3saa3iy3v2fzkg3"; depends=[dplyr DT kableExtra rlang spork tidyr]; }; + tabnet = derive2 { name="tabnet"; version="0.2.0"; sha256="1b934izzqlph9kkl71n6dqsspgcrgyc7hq32ln17qjymy7dvjw52"; depends=[coro glue hardhat magrittr progress rlang tibble torch vctrs]; }; tabr = derive2 { name="tabr"; version="0.4.5"; sha256="1nkzbqy9nb6pd895glld009vmry5rnhd7h9q31s8xh97kwlwk9c2"; depends=[crayon dplyr ggplot2 magrittr purrr tibble tidyr]; }; - tabshiftr = derive2 { name="tabshiftr"; version="0.1.2"; sha256="1b5x9mmc0dcd1nl82wf45xvls685vbqz2qimhx23c4ra55kxpz8n"; depends=[checkmate crayon dplyr magrittr purrr rlang stringr testthat tibble tidyr tidyselect]; }; + tabshiftr = derive2 { name="tabshiftr"; version="0.3.0"; sha256="05xr8xml7r5kzka9x1lhz0pzq8il1l1zkrjx6mlibkz7l36s6gb2"; depends=[checkmate crayon dplyr magrittr purrr rlang stringr testthat tibble tidyr tidyselect]; }; tabuSearch = derive2 { name="tabuSearch"; version="1.1.1"; sha256="0396a8hla508na1hmyyhfbl8w10dbg810cln2xyhhvxi7rr223dj"; depends=[]; }; + tabula = derive2 { name="tabula"; version="1.6.1"; sha256="1zjggqv2b2m0mz57ic2q4knm0n1jsb8z1xnb57aajbmqz48zyx3w"; depends=[arkhe dimensio ggplot2 rlang]; }; tabularaster = derive2 { name="tabularaster"; version="0.7.0"; sha256="061nc82svcz37lvwsx549rn6s2q6x75wjs0j9k8zcvlzr5wyyfgi"; depends=[dplyr fasterize magrittr raster silicate spatstat_geom tibble]; }; tabularmaps = derive2 { name="tabularmaps"; version="0.1.0"; sha256="07i76n2fpl2ma6jl3zdbay0zmmaaxrxhv1368xm2d575br42nri4"; depends=[ggforce ggplot2 purrr rlang]; }; tabulator = derive2 { name="tabulator"; version="1.0.0"; sha256="1dylmw5prwir3qj13lxkvlzq6j7r23y3gz1g0bjyanb0xmzgxn4k"; depends=[assertthat data_table dplyr magrittr purrr rlang stringr tibble tidyr]; }; tabulizer = derive2 { name="tabulizer"; version="0.2.2"; sha256="0zd5cfqwgirqchw1mvziscxvzl8pb1y6rbfywkn9i9pxfydkm5vi"; depends=[png rJava tabulizerjars]; }; tabulizerjars = derive2 { name="tabulizerjars"; version="1.0.1"; sha256="005n2gyzzmq8h0mpj8xs6ri6llzwag7nqzpm4vnzp81vwy8kmf92"; depends=[rJava]; }; tabulog = derive2 { name="tabulog"; version="0.1.1"; sha256="0n6qjd7kmvxx5na71f358pw3bbwa69vh8qjkrs5mkb3izxabcq67"; depends=[yaml]; }; + tabxplor = derive2 { name="tabxplor"; version="1.0.1"; sha256="0n2hk0b288b2bqfhqv1yps9n150aml7vmkr6ic7cffc95dcvxqss"; depends=[cli crayon DescTools dplyr forcats kableExtra magrittr pillar purrr rlang stringi stringr tibble tidyr tidyselect vctrs]; }; tacmagic = derive2 { name="tacmagic"; version="0.3.1"; sha256="1rayyavjppi5dbcmb4yb2nf85ch2li766sdllfsirb19bb3d4c2d"; depends=[pracma R_matlab]; }; tactile = derive2 { name="tactile"; version="0.2.0"; sha256="0jjfbsadxbf9s6vzi82rw5qa6hdc8iz4jci9xpbzwrjkb90dzd08"; depends=[gridExtra lattice latticeExtra MASS RColorBrewer]; }; tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; }; + tailDepFun = derive2 { name="tailDepFun"; version="1.0.1"; sha256="0rrjg4ky3pjbfwppmnwyijvlzq3c3nf33rl0w4vly52v1ramp5c6"; depends=[copula cubature mvtnorm SpatialExtremes]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; taipan = derive2 { name="taipan"; version="0.1.2"; sha256="192sy5pgq74vs31p7jfn6svdzf9mk9ybppzhp1rlki1bagmm5f1r"; depends=[shiny]; }; takos = derive2 { name="takos"; version="0.2.0"; sha256="09w9lkqhxdb26fvrsb8n16601kqpr2smplipx3lj6cdgbyhb1hqz"; depends=[baseline broom colorRamps data_table deSolve devEMF MASS minpack_lm pracma segmented sfsmisc smoother]; }; tanaka = derive2 { name="tanaka"; version="0.1.3"; sha256="1x5czib9vqpxbr61if1rnlyrld6gx2zf22jz5rcagb8x3bxmd5g6"; depends=[isoband raster sf]; }; tangles = derive2 { name="tangles"; version="0.8.1"; sha256="06a5hn5hkvgr6pcjz3n0vi1zwmv00wypi5f62agqh8mas80v44vh"; depends=[digest raster sp]; }; tangram = derive2 { name="tangram"; version="0.7.1"; sha256="0p0hrn3jv1l00nsjqa0j9yv4982r08fwgsj01pc06vmipg87kjiy"; depends=[base64enc digest htmltools knitr magrittr R6 stringi stringr]; }; + tangram_pipe = derive2 { name="tangram.pipe"; version="1.0.0"; sha256="1r1ibwl2p53lk4p5d07777aasi7gnlmsjw335a9fnkzb1sbly5cj"; depends=[dplyr]; }; tapkee = derive2 { name="tapkee"; version="1.2"; sha256="1xgz2cv5jb1hdnl8y8zs4x6p1dk1vv8zbs4wfsj61gpfyf9gkh4f"; depends=[]; }; tapnet = derive2 { name="tapnet"; version="0.3"; sha256="1fjg98m19iwbzijs5b5l4ssrbx1shv1hmgn1166cbni9y76m44sh"; depends=[ape bipartite MPSEM phytools vegan]; }; + tarchetypes = derive2 { name="tarchetypes"; version="0.3.1"; sha256="05m27inf7sbf96z3qfaj1659pwifysav85gp2r9w8jk45da6wm49"; depends=[digest fs rlang targets tibble tidyselect vctrs withr]; }; targeted = derive2 { name="targeted"; version="0.1.1"; sha256="09y4lhwfh7rzk343hc2pjr334x3978q6vyhsvpana0db8plas7aw"; depends=[futile_logger lava optimx Rcpp RcppArmadillo]; }; - targets = derive2 { name="targets"; version="0.4.2"; sha256="0vrdgikgxhm0gvcrs4qvlp3n63jvkkg54jhsjaqnyyimdhv15wm4"; depends=[callr cli codetools data_table digest igraph R6 rlang tibble tidyselect vctrs withr yaml]; }; + targets = derive2 { name="targets"; version="0.8.0"; sha256="0lcn4la6qh3ljks8s7q9il2hm2lzfhf5wzi5igxs9d0xlqxr2r8n"; depends=[callr cli codetools data_table digest igraph knitr R6 rlang tibble tidyselect vctrs withr yaml]; }; tashu = derive2 { name="tashu"; version="0.1.1"; sha256="0rirjalridr79a7j3qz80l2vp6m8paqr97ac241b58756k7nr5j7"; depends=[dplyr drat ggplot2 lubridate plyr randomForest RColorBrewer reshape2]; }; - tastypie = derive2 { name="tastypie"; version="0.0.3"; sha256="1xv327nkn6rmzljy21yzahj2h82sl39dmia0qaj1fkcp8yfjqsi2"; depends=[dplyr ggplot2 RColorBrewer scales shadowtext tibble]; }; + tastypie = derive2 { name="tastypie"; version="0.1.0"; sha256="15ivl0rvnp1j09axk0jaf1wip5cjbnvfmx0crhqqd5y27mfa2hzd"; depends=[dplyr fmsb ggplot2 packcircles RColorBrewer scales shadowtext tibble]; }; tatest = derive2 { name="tatest"; version="1.0"; sha256="1yd9pdpdhxwpllnj5wxa7ly29qiw8qywx9lx0w3nizczlx35fgjy"; depends=[]; }; tatoo = derive2 { name="tatoo"; version="1.1.1"; sha256="0w9rm6cnc1mpfyklb8njzjwph2c38niinzxiflrqjqfdp7nd8281"; depends=[assertthat colt crayon data_table magrittr openxlsx stringi withr]; }; - tau = derive2 { name="tau"; version="0.0-23"; sha256="05qwvwmx631w19sxaw7jw5dgrdnj134f70l6rmfh3rpblpdy8509"; depends=[]; }; + tau = derive2 { name="tau"; version="0.0-24"; sha256="1q8pd7m6rd0899c44plxns5yydifhsccyb51glgw07ni5v4rz3gh"; depends=[]; }; tauturri = derive2 { name="tauturri"; version="0.3.0"; sha256="014301f5mzy6vblqzb61bxjv46kdynmmrxjpxyvk01w1k8wkwfcn"; depends=[httr magrittr plyr purrr tibble]; }; - taxa = derive2 { name="taxa"; version="0.3.4"; sha256="09mnszr8pdjxv680pbyp12wwvfb2iqpnqh3hmds05nisl8g5307x"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; + taxa = derive2 { name="taxa"; version="0.4.0"; sha256="1clvq69z68xidv5m1s8vmavh8l6bv6dpb9iln7axb5jbj0iqx1xj"; depends=[cli crayon dplyr jsonlite knitr lazyeval magrittr pillar R6 rlang stringr tibble tidyr vctrs viridisLite]; }; taxadb = derive2 { name="taxadb"; version="0.1.3"; sha256="1ai2p58h75170wh8701dpyjb9cx5lfzx5xpq33l4w8pybh24zaab"; depends=[arkdb contentid curl DBI dbplyr dplyr duckdb jsonlite magrittr memoise progress rappdirs readr rlang RSQLite stringi tibble]; }; - taxalight = derive2 { name="taxalight"; version="0.1.3"; sha256="19phg5pwij2m4qjrjbbsxzs188xj1wva1n60i0p3m974xpjq7jbf"; depends=[contentid thor]; }; + taxalight = derive2 { name="taxalight"; version="0.1.5"; sha256="035jzz1dk1icxs9mbd6q091ljf1lalr0wwbcz6a90avwyqphjjx3"; depends=[contentid thor]; }; taxize = derive2 { name="taxize"; version="0.9.99"; sha256="0738fzckbwkgf21vranxhcfjq487rp3kjdnz2gfvdd1dm21jfp8s"; depends=[ape bold cli conditionz crayon crul data_table foreach jsonlite natserv phangorn R6 ritis rotl rredlist tibble wikitaxa worrms xml2 zoo]; }; taxizedb = derive2 { name="taxizedb"; version="0.3.0"; sha256="1d7wz6df624263myq4rlvr3mhzhhhdglrrs7f44j201z4f536a2z"; depends=[curl DBI dbplyr dplyr hoardr magrittr readr rlang RSQLite tibble]; }; - taxlist = derive2 { name="taxlist"; version="0.2.1"; sha256="0nank4knd0ak3z2xnayyfr0cd3kgg363xd25c6f2d7q6cg5jkpjj"; depends=[foreign stringdist taxa taxize vegdata]; }; - taxonomizr = derive2 { name="taxonomizr"; version="0.7.1"; sha256="0kp2fxld48hi738w1wvg8h0zf1gsj7y3dr32qqgx6v9n82lssdls"; depends=[data_table R_utils RSQLite]; }; + taxlist = derive2 { name="taxlist"; version="0.2.2"; sha256="0xdl7aw3ifn4v2wclk38iyayy9r71cx5diir1m4pws986qfdddb4"; depends=[foreign stringdist taxa taxize vegdata]; }; + taxonomizr = derive2 { name="taxonomizr"; version="0.8.0"; sha256="0i1xn5x8c555hdlnfbhpga4vzn1l6kcqjgcw472y8yg0n7s2birx"; depends=[curl data_table R_utils RSQLite]; }; taxotools = derive2 { name="taxotools"; version="0.0.79"; sha256="1q69dh1ifa7mc8y3bdgvvg97s9prflh6mczqr4clxnsysd3xhafs"; depends=[plyr sqldf stringdist stringr taxize wikitaxa]; }; + taylor = derive2 { name="taylor"; version="0.2.1"; sha256="07agh34c1l1jgcqfq1p7fpfzd2sihsfs16xqc2m8yy4qpij929xm"; depends=[crayon ggplot2 glue rlang scales tibble vctrs]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbd = derive2 { name="tbd"; version="0.1.0"; sha256="1wmfy3p82gckhfsslxzapryfygmircii7x24j6ysfyx52gy8iwf5"; depends=[numDeriv]; }; - tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; tbl2xts = derive2 { name="tbl2xts"; version="1.0.4"; sha256="1h54yhwbmlzgii202dcrz336d790374p213f1ba6rlm5syad88v9"; depends=[dplyr rlang tibble xts zoo]; }; tbm = derive2 { name="tbm"; version="0.3-4"; sha256="1n2lql8h4ikm49l7cn9n3ybnivhgx373hmxkarwm4an4d0ifri0z"; depends=[basefun coneproj mboost mlt sandwich variables]; }; tbma = derive2 { name="tbma"; version="0.1.0"; sha256="066p3szfayyimwblghm1lipjf21xgscq1fzbzpqz16lqjpb99ni1"; depends=[data_table ranger RcppRoll zoo]; }; @@ -16360,13 +17037,13 @@ in with self; { tbrf = derive2 { name="tbrf"; version="0.1.5"; sha256="1mxfvgb18a62igdh3af4m8x6fl69s25j4x7isd70w744w6jvch3h"; depends=[boot dplyr lubridate purrr rlang tibble tidyr]; }; tcensReg = derive2 { name="tcensReg"; version="0.1.7"; sha256="07wwn65c4q2ngafxhdd9vl0y1wambfy158mf38skxm295yidd05n"; depends=[maxLik Rdpack]; }; tcftt = derive2 { name="tcftt"; version="0.1.0"; sha256="0p5ln0sl0fasdn49252g4lvwgwajgl7lh33a4r073ib54hxbj7bk"; depends=[]; }; - tcgsaseq = derive2 { name="tcgsaseq"; version="2.0.5"; sha256="1hfs3ppva7hi6h7965jfpgjp76ygaibmymkhxihrs8ag2pxp4skv"; depends=[CompQuadForm ggplot2 GSA KernSmooth pbapply statmod]; }; - tci = derive2 { name="tci"; version="0.1.0"; sha256="0fpvkj0542v20r3zy5n72rl8nwzhwnbcabn7yif91vxa00hqr7w9"; depends=[ggplot2 gridExtra mvtnorm reshape truncnorm]; }; tcl = derive2 { name="tcl"; version="0.1.1"; sha256="01klrzvw7vc0iwqpmcikgqm8jx3g7536r5f8gb6vwcik912maxnl"; depends=[colorspace eRm lattice ltm MASS Matrix numDeriv psych psychotools]; }; tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; }; tclust = derive2 { name="tclust"; version="1.4-2"; sha256="1nb5iky4kc832627jf28lzj19wrvgwg5da6fyl3kyf0npmyx1p4m"; depends=[]; }; tcpl = derive2 { name="tcpl"; version="2.0.2"; sha256="0xic4jy8ldawmkvvwckiyy57ai5wif9yn7hyfndbxr6mvjl3rbbc"; depends=[data_table DBI numDeriv RColorBrewer RMySQL sqldf]; }; - td = derive2 { name="td"; version="0.0.2"; sha256="19lpzby4wqsg22pimzisi9jm2xipvyhd1kaniazmclk3gvjnj23y"; depends=[RcppSimdJson]; }; + tcplfit2 = derive2 { name="tcplfit2"; version="0.1.1"; sha256="0h704bc9wgwjdr518q2az11lx1965q1rs9jr7al04m3m4zg1dg1n"; depends=[future future_apply numDeriv RColorBrewer stringi stringr]; }; + tcsinvest = derive2 { name="tcsinvest"; version="0.1.1"; sha256="1harmb5ni70k241aq1vww5w7fmjqmlwd6nfma2xa44f3hj7nrf52"; depends=[data_table httr jsonlite websocket]; }; + td = derive2 { name="td"; version="0.0.4"; sha256="1wv34bn86rxm2ljwz9sdy4zdssjy7mwwk56y2civji34821119q6"; depends=[RcppSimdJson]; }; tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; tdaunif = derive2 { name="tdaunif"; version="0.1.0"; sha256="0a24lqiimp54fmj4zi7bakxral8ny60n25h9arwl6m00c7cn98pl"; depends=[]; }; tdigest = derive2 { name="tdigest"; version="0.3.0"; sha256="17axsir4xig3vm3sc2gziy9n0p80b14vg52nwys23bzkfp0n63bm"; depends=[magrittr]; }; @@ -16393,32 +17070,31 @@ in with self; { tensor = derive2 { name="tensor"; version="1.5"; sha256="19mfsgr6vz4lgwidm80i4yw0y1dr3n8i6qz7g4n2xa0k74zc5pp1"; depends=[]; }; tensorA = derive2 { name="tensorA"; version="0.36.2"; sha256="19wwh654qlja4z1n7afjpzsrrm53p8ddysa2vra5mdnkddb4g2cf"; depends=[]; }; tensorBF = derive2 { name="tensorBF"; version="1.0.2"; sha256="1dw1a6xqcsl4isbzbfiplgqq5nak5n9ffzm23mzzmkh1r1a8kl1y"; depends=[tensor]; }; - tensorBSS = derive2 { name="tensorBSS"; version="0.3.7"; sha256="14c2c551k3x3lwjh4gf0pqqhjfb8v3f6chzq9kgjqrmy76ax185w"; depends=[fICA ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; - tensorTS = derive2 { name="tensorTS"; version="0.1.1"; sha256="10avj8f7xksknlblfzk4i9znswfi3mnsw3v7yd5cs3mqzhsaws11"; depends=[abind expm MASS Matrix pracma rTensor tensor]; }; - tensorflow = derive2 { name="tensorflow"; version="2.4.0"; sha256="0z10lwrmf77m7ncpq2gdrv18m5wafk29x65l2q4ppsaxpkrc03k7"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; - tensorordinal = derive2 { name="tensorordinal"; version="0.2.0"; sha256="03xnwq6v5vcvgxd9acsqplbh1qr261yc0hybfkzss4rfns0lc85l"; depends=[MASS pracma rTensor]; }; + tensorBSS = derive2 { name="tensorBSS"; version="0.3.8"; sha256="1chgkdshjpxzy0cxkgjzpr5k4v2hyad1vchrxyqhsj9isfic2581"; depends=[abind fICA ggplot2 ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; + tensorTS = derive2 { name="tensorTS"; version="0.1.2"; sha256="0hwskjw611vlrd3q6yypgk6g8p704yih6m9869hjyn3x0rf2kw7n"; depends=[abind expm MASS Matrix pracma rTensor tensor]; }; + tensorflow = derive2 { name="tensorflow"; version="2.6.0"; sha256="1lkzxc3b5gkcg4hwqr57cysplcba6ff44qz8lbvk19kxnrhjaf9g"; depends=[config processx reticulate rstudioapi tfautograph tfruns yaml]; }; tensorr = derive2 { name="tensorr"; version="0.1.1"; sha256="18xdvp328h96jn8y1iayxh7cyz2s8j5nn43nq18pyaxq271hkfyh"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; - tensorregress = derive2 { name="tensorregress"; version="3.0"; sha256="1dlxdc5jgfqzs6jzgirxqdigmcr3yr20ikbvd2c9b3y41cpsl11d"; depends=[MASS pracma speedglm]; }; - tensorsign = derive2 { name="tensorsign"; version="0.1.0"; sha256="0jk34pns3a8mclhw4wcv3yib8dqbg07jl730x4ymy2hylvlaxp4q"; depends=[Matrix rTensor]; }; + tensorregress = derive2 { name="tensorregress"; version="4.0"; sha256="0pb512v3gahgv3qc31i5v2jg8wixi6ps3p920sq5dgpfrig9hg2q"; depends=[MASS pracma speedglm]; }; tensorsparse = derive2 { name="tensorsparse"; version="3.0"; sha256="0xx003nh5bi87cbsqb7ikpcs4yhjhphh7pybzzas44qkwbn4fn1k"; depends=[]; }; tensr = derive2 { name="tensr"; version="1.0.1"; sha256="1z6b3ra7fgn88mxbhsq65x3frj5j7p17n119s9kbw7sg9y633vfx"; depends=[assertthat]; }; - tergm = derive2 { name="tergm"; version="3.7.0"; sha256="1prmqrns5cikx3w25rki7v08qs0zysplqz65ixzi54d6pmhb3lmg"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; - tergmLite = derive2 { name="tergmLite"; version="2.2.1"; sha256="1fi379vginmgry4yhzd43lzrkn6vh44hrfcgdzgyxrf16rj0v617"; depends=[ergm network Rcpp statnet_common tergm]; }; - term = derive2 { name="term"; version="0.3.1"; sha256="1aqw4l0cb5ksxa2dd0hd01y4kkklpz0j5mrjq96n6gpr8mzkp97m"; depends=[chk extras lifecycle purrr rlang universals vctrs]; }; + tergm = derive2 { name="tergm"; version="4.0.2"; sha256="0r1afidhfwmfkihcmry37j9imq26b55m84nxgv3r03y9cq8xdcas"; depends=[coda ergm MASS network networkDynamic nlme purrr robustbase statnet_common]; }; + tergmLite = derive2 { name="tergmLite"; version="2.5.0"; sha256="17qs02lh3if4s6ims5scig0bwykb6cvb4a87k6iz24ccb18gahlc"; depends=[ergm network Rcpp statnet_common tergm tibble]; }; + term = derive2 { name="term"; version="0.3.2"; sha256="0nj9jv3k565mqpmvcf5sfa6mlzy99y6sq2r06g7pf1lz0q7j3lpa"; depends=[chk extras lifecycle purrr rlang universals vctrs]; }; ternvis = derive2 { name="ternvis"; version="1.2"; sha256="057i6i3ygxrin0npc18gsg3dpdldzafyb5sr6lix5mhy6b09lkxf"; depends=[dichromat maps quadprog]; }; - terra = derive2 { name="terra"; version="1.2-5"; sha256="0wmrb75y271xdx781xql0dx702ghnj4d2i2zr9375kqjbwgx9nad"; depends=[raster Rcpp]; }; + terra = derive2 { name="terra"; version="1.3-22"; sha256="1z5zql68q4n81ccpl02hndhbavhhqs65bli1hjxlqdwdq192whkh"; depends=[raster Rcpp]; }; terrainmeshr = derive2 { name="terrainmeshr"; version="0.1.0"; sha256="1xab6wzq2izzdvsss1rlgp5m3cn45naxhymq6cglipj0fd792jbr"; depends=[Rcpp]; }; - terrainr = derive2 { name="terrainr"; version="0.4.0"; sha256="0bx5vp12ydbmkb98zc4ls4rkzmdggjygkz9l9xs15kmdxkrl1sxj"; depends=[base64enc gdalUtils ggplot2 httr magick png raster sf units]; }; - tesseract = derive2 { name="tesseract"; version="4.1"; sha256="1a7cf48n7hdd6inqz23ifqhq6kx6wxri34a79ns2vxaj6f4llxf0"; depends=[curl digest pdftools rappdirs Rcpp]; }; + terrainr = derive2 { name="terrainr"; version="0.5.0"; sha256="0jams1b0a2bvm3l8kybfgvqgarm98kvhzh6n68mrh7xnk5hxgyjx"; depends=[base64enc gdalUtils ggplot2 httr magick png raster sf units]; }; + tesseract = derive2 { name="tesseract"; version="4.1.2"; sha256="1x29i48khn679x8xf246br12aa3ax96sh5x8m2ya96kz6m7zchjh"; depends=[curl digest pdftools rappdirs Rcpp]; }; test2norm = derive2 { name="test2norm"; version="0.1.1"; sha256="11by5a1j6613akxj1nc16r07jfwxr1izkpvymr9yycnddiqyp42c"; depends=[mfp]; }; testDriveR = derive2 { name="testDriveR"; version="0.5.1"; sha256="0wjdqvsyv33fsg1lljp9m0bhz38mpfgpgickgj4zdspc9x6lbnv6"; depends=[]; }; + testarguments = derive2 { name="testarguments"; version="0.0.1"; sha256="1x77z0pljfi6z4bs6db3zsjbpyypsd3jbd0ykh4pq07595phh8x5"; depends=[dplyr ggplot2 magrittr plyr reshape2]; }; testassay = derive2 { name="testassay"; version="0.1.1"; sha256="1gc35s5an0cpvadwx4bswy5lzcp01az3gnkjhvph6sm3pi3xjxm7"; depends=[]; }; testcorr = derive2 { name="testcorr"; version="0.2.0"; sha256="0bqhf4p4csyd430240d8gh09axpz3h108fh78sbgpyqdhiq3d1fh"; depends=[forcats ggplot2 knitr reshape2 scales]; }; testequavar = derive2 { name="testequavar"; version="0.1.2"; sha256="12qfy53rkrasxphcfmch5bmdlvlybd27jfg3azsi3fg4zk4qgdw2"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; testit = derive2 { name="testit"; version="0.13"; sha256="104dcxdmzgj340mwk4lpw1y6j1xc4rv4a2v09ckx3nvbmdl73m4h"; depends=[]; }; - testthat = derive2 { name="testthat"; version="3.0.2"; sha256="03sbk36vrjhzfap6a9czxw93r7h06rh3mb01inbrhrh5r2pd00qq"; depends=[brio callr cli crayon desc digest ellipsis evaluate jsonlite lifecycle magrittr pkgload praise processx ps R6 rlang waldo withr]; }; + testthat = derive2 { name="testthat"; version="3.0.4"; sha256="0iqizv2gpv9fg766qv8hbkmc6c5i9xcfrmq9k5m2550p28zff2w3"; depends=[brio callr cli crayon desc digest ellipsis evaluate jsonlite lifecycle magrittr pkgload praise processx ps R6 rlang waldo withr]; }; testthis = derive2 { name="testthis"; version="1.1.1"; sha256="0csragn695698dpkr9d3md0g81bzpy5mybd0jik669q9cs8sdzh2"; depends=[assertthat devtools fs magrittr pkgload rprojroot stringi testthat usethis]; }; testtwice = derive2 { name="testtwice"; version="1.0.3"; sha256="06fr13ww2wqk753p0cnl1ldn3nqrvdfnz0lgkpldcn0xwiwjh2x2"; depends=[mvtnorm]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; @@ -16427,42 +17103,44 @@ in with self; { texreg = derive2 { name="texreg"; version="1.37.5"; sha256="0cb3kvxfi9k9g958fkb73cgqdxx3h9bz2cnaakic4wgrkv27mk2c"; depends=[httr]; }; text = derive2 { name="text"; version="0.9.10"; sha256="1ramsv2pbg57yyxp5qjkls82gl5icda6f5116hr0w5s0w3jpajmj"; depends=[cowplot dplyr furrr future ggplot2 ggrepel magrittr parsnip purrr recipes reticulate rlang rsample stringr tibble tidyr tokenizers tune workflows yardstick]; }; text_alignment = derive2 { name="text.alignment"; version="0.1.2"; sha256="0qjnzdm7savn2jqmm23cd3rszyihnhb5rfnygc36ccfd15vav79j"; depends=[Rcpp]; }; + text2map = derive2 { name="text2map"; version="0.1.0"; sha256="1hr3wj9j86siixqa37kgjp21j3hrgk3afb9f88s5qxv2zrgjd37m"; depends=[doParallel dplyr fastmatch foreach igraph kit magrittr Matrix mlpack qgraph rlang stringi stringr text2vec tibble]; }; text2speech = derive2 { name="text2speech"; version="0.2.13"; sha256="0c0h4yfp1gzaf4snav84iy5m0fx8az0pw1h2s33239dxkwcff893"; depends=[aws_signature dplyr googleAuthR googleLanguageR httr knitr magrittr mscstts tuneR]; }; text2vec = derive2 { name="text2vec"; version="0.6"; sha256="0r75cv77x2zm1z66s95hic71dpbqmybz39n48q6mz7gfd3m7312y"; depends=[data_table digest lgr Matrix mlapi R6 Rcpp rsparse stringi]; }; - textTinyR = derive2 { name="textTinyR"; version="1.1.3"; sha256="0z9k978yk54zxrrjajcb0nanfhfpxm2bq2vbmk6w5s194da6y3xl"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + textTinyR = derive2 { name="textTinyR"; version="1.1.4"; sha256="0n9hvxp1n5nzdrx0ygic4lqkz5bk9a3f3xwnrdlmaxm9qjlvx0li"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; textTools = derive2 { name="textTools"; version="0.1.0"; sha256="1d9j1bj17ki169h4lmlz2b2c2m60q6b95prjscz346lc4vw5160a"; depends=[data_table]; }; textcat = derive2 { name="textcat"; version="1.0-7"; sha256="1m31alkzy13acgf4ahnzpbyazflhpmry369vqdvn5f86wcsls833"; depends=[slam tau]; }; textclean = derive2 { name="textclean"; version="0.9.3"; sha256="0kgjh6c4f14qkjc4fds7q7rpf4nkma3p0igm54fplmm3p853nvrz"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; textdata = derive2 { name="textdata"; version="0.4.1"; sha256="096gafbbh48yz4zbakv91cfd75kv8dg4p361s50rfqqjz57192fx"; depends=[fs rappdirs readr tibble]; }; texteffect = derive2 { name="texteffect"; version="0.3"; sha256="1qcbr18h3vakh6ymw4axzqcqrpss6z68a592xl879b82l2nlq8a7"; depends=[boot ggplot2 MASS]; }; + texter = derive2 { name="texter"; version="0.1.9"; sha256="1vj1dlv2dyb3hyr60p91sh4p514i0m7gf86zk32xbdyv6k9zdkmf"; depends=[dplyr ggplot2 magrittr plyr purrr stopwords stringr textdata tidyr tidytext]; }; textfeatures = derive2 { name="textfeatures"; version="0.3.3"; sha256="0x67kms7ipsadymc9jwja7wymav8y9kc5sbmp2vw4n4l89n32raa"; depends=[dplyr purrr rlang text2vec tfse tibble tokenizers]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; textile = derive2 { name="textile"; version="0.1.4"; sha256="069gb0j8ym44j1wk05xd3sixbvpxhhnhwax2gvyb9kbh5b99qpi6"; depends=[]; }; textir = derive2 { name="textir"; version="2.0-5"; sha256="0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb"; depends=[distrom gamlr Matrix]; }; - textmineR = derive2 { name="textmineR"; version="3.0.4"; sha256="1388blqxziqzjipys6icdifnnzgxvm0w3yr9jihl32ldd701rvvw"; depends=[gtools magrittr Matrix Rcpp RcppArmadillo RcppProgress RSpectra stopwords stringr text2vec]; }; + textmineR = derive2 { name="textmineR"; version="3.0.5"; sha256="0qpl9fnrirxsvch97pjwws02x67p3dk6fizg7h4wcjaihibbbx3q"; depends=[gtools magrittr Matrix Rcpp RcppArmadillo RcppProgress RSpectra stopwords stringr text2vec]; }; textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; - textplot = derive2 { name="textplot"; version="0.1.4"; sha256="1sgkndy2cxk8c76h8hwajn6f78w5jj2n8vsmaxh9kj931crzn8cy"; depends=[data_table lattice Matrix]; }; + textplot = derive2 { name="textplot"; version="0.2.0"; sha256="1fhnwbcgkliq71lry21762djhlbap1qg4mgil0np46aa6619l21m"; depends=[data_table lattice Matrix]; }; textrank = derive2 { name="textrank"; version="0.3.1"; sha256="0a777wchiax0y8jprvz5xw8h1xh7yvad0wrqhkgbqy5p3cvlcih6"; depends=[data_table digest igraph]; }; textreadr = derive2 { name="textreadr"; version="1.0.2"; sha256="0rcdgcgdn1lnnpjkvcsyfwcbpdlhcx35sbr8zlyapgmfglbnpjg3"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; }; - textrecipes = derive2 { name="textrecipes"; version="0.4.0"; sha256="1krza6ym69xjj1zix4lb5d31lnik5pi43ycyvx2invhr9yqwyjd0"; depends=[dplyr generics magrittr Matrix purrr Rcpp recipes rlang SnowballC stringr tibble tidyr tokenizers vctrs]; }; + textrecipes = derive2 { name="textrecipes"; version="0.4.1"; sha256="0wdkfh9591pfi4n0xj38kny5jbb43csdgcjiag3xh3zdmyhaz8li"; depends=[dplyr generics magrittr Matrix purrr Rcpp recipes rlang SnowballC tibble tidyr tokenizers vctrs]; }; textreg = derive2 { name="textreg"; version="0.1.5"; sha256="0h44z5hyndnvzd9axix7gpmhbdx347dfgxw9r8w38kyw6dklbjy6"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.5"; sha256="1mva0f6pk0kpfw0vf90qw3a25f1i3imdhk2s7hxyzans0z2237jd"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tibble tidyr]; }; - textshape = derive2 { name="textshape"; version="1.7.1"; sha256="02111kj3kka84mpx7s19bjna9cas8diw5fxz51v5ggz0ldswa5pa"; depends=[data_table slam stringi]; }; - textshaping = derive2 { name="textshaping"; version="0.3.3"; sha256="0yl3cv6r8k27h4lzbrsikjydhz94skdjmxx4zqzihvb7h3jfnlpn"; depends=[cpp11 systemfonts]; }; + textshape = derive2 { name="textshape"; version="1.7.3"; sha256="0k9injxykgj2qprc7dygd7gafvcbh3r9x84qzaa1al21pk0dz7ds"; depends=[data_table slam stringi]; }; + textshaping = derive2 { name="textshaping"; version="0.3.5"; sha256="06bdc5wxvgv38fnzpyjj9p62ifpfshaangkn96gw05yxn11s46h0"; depends=[cpp11 systemfonts]; }; textstem = derive2 { name="textstem"; version="0.1.4"; sha256="1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2"; depends=[dplyr hunspell koRpus koRpus_lang_en lexicon quanteda SnowballC stringi textclean textshape]; }; textutils = derive2 { name="textutils"; version="0.2-1"; sha256="07grvvhs62caa37rav1v37816x6pdk0m5nd4isiw00966ydwy9ch"; depends=[]; }; tfCox = derive2 { name="tfCox"; version="0.1.0"; sha256="06mbiz1jwp8mv5dbwyvdvy1wpp8s3xp9hhsm94vrbvjaxg680g28"; depends=[Rcpp survival]; }; tfaddons = derive2 { name="tfaddons"; version="0.10.0"; sha256="16adig97qmafval6i29pqdinsgbwjz2isajxdx1xvbf1mrawkmz0"; depends=[keras purrr reticulate rstudioapi tensorflow]; }; - tfarima = derive2 { name="tfarima"; version="0.1.1"; sha256="1hj8xablhmq7mhwx5xj6m8m5zl53big1cp08x808180ihif2zhlk"; depends=[numDeriv Rcpp RcppArmadillo zoo]; }; - tfautograph = derive2 { name="tfautograph"; version="0.2.0"; sha256="1jpimmlsihr78v56v9mp51grmvwa198a1inahihk3yj02wzfqizj"; depends=[reticulate tensorflow]; }; - tfdatasets = derive2 { name="tfdatasets"; version="2.4.0"; sha256="1026465g1arr7hpmbgagsa0vzsi96kpvypaz95nhb6923al3yzww"; depends=[generics magrittr reticulate rlang tensorflow tidyselect vctrs]; }; + tfarima = derive2 { name="tfarima"; version="0.2.1"; sha256="1n7bdhcn6cvz7ly9b3jgxyw2nan0ixzj1m9d316yalmbkqh1md62"; depends=[numDeriv Rcpp RcppArmadillo zoo]; }; + tfautograph = derive2 { name="tfautograph"; version="0.3.2"; sha256="0fmaq1ggjyxgf2ss7qb8jk74sfwc3s1vc123pd5glclxcy1ib0j2"; depends=[backports reticulate]; }; + tfdatasets = derive2 { name="tfdatasets"; version="2.6.0"; sha256="06sjcbrv4msl66kjjq30557x8pikcqp8350k9f77ilxgcq2nhqqb"; depends=[generics magrittr reticulate rlang tensorflow tidyselect vctrs]; }; tfdeploy = derive2 { name="tfdeploy"; version="0.6.1"; sha256="1vbxyvmzaafbwp1pmvzn16zyl4nz85787m79gn7iazh9zw9f7j34"; depends=[httpuv httr jsonlite magrittr reticulate swagger tensorflow]; }; tfer = derive2 { name="tfer"; version="1.3"; sha256="1a5i9jccj39n61ixx8q2qq9ismr43jybp0vlvy6jda99r92zdhhl"; depends=[]; }; - tfestimators = derive2 { name="tfestimators"; version="1.9.1"; sha256="0da34iy7fyfzhbvaj8494sl6nrmhcfbqcr71l95ziaxgb8285ndm"; depends=[forge magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; + tfestimators = derive2 { name="tfestimators"; version="1.9.2"; sha256="1gwj2xal5an0m9c2x1rxzsg07hgzjyxr4m08sd3salgyc2h3bi5g"; depends=[forge magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; tfhub = derive2 { name="tfhub"; version="0.8.0"; sha256="155kk42lzm19kjnlfvagqv5ckg2s0667d5r2ca5cabzaksil8223"; depends=[magrittr reticulate rstudioapi tensorflow]; }; tfio = derive2 { name="tfio"; version="0.4.1"; sha256="089vh0k12z0ymk4v585hfnl5yqp28rgzqgy633m874h6fqzhhxvp"; depends=[forge magrittr reticulate tensorflow tfdatasets]; }; - tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; - tfprobability = derive2 { name="tfprobability"; version="0.11.0.0"; sha256="0mchj8gydgifvm5i4xzcjrhqqby9hhlksczz33njzrpyk807pndz"; depends=[keras magrittr reticulate tensorflow]; }; + tfplot = derive2 { name="tfplot"; version="2021.6-1"; sha256="0w0m9d2lvjl96vxwvks2v086y4gqiv2n0d50j2yrngys9p2nrlxc"; depends=[tframe]; }; + tfprobability = derive2 { name="tfprobability"; version="0.12.0.0"; sha256="1f57fzmvgh5qhpf750c16lmppjcbbdjz6w2cqr85kjv049ch3a50"; depends=[keras magrittr reticulate tensorflow]; }; tframe = derive2 { name="tframe"; version="2015.12-1.1"; sha256="1yff22jzh1mp73zbz2mav6z8m42lylfjhb8dgxj4337fv3if3i13"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; tfruns = derive2 { name="tfruns"; version="1.5.0"; sha256="04lfckg1if3kfwcl4s4fcc9aw04crwk4m1qr55ag22j2x2jlb2l9"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; @@ -16476,9 +17154,9 @@ in with self; { thankr = derive2 { name="thankr"; version="1.0.0"; sha256="089ikp85d5ia6a1qzmw8dkgcmz628cibmwfzcpk7m3ii8acxq91w"; depends=[]; }; thectar = derive2 { name="thectar"; version="1.0.0"; sha256="1qh0qzg0ybb38kzm56xxlvhm201pdjm16aky5f1fdflcsszgy8mx"; depends=[proxy smacof]; }; theiaR = derive2 { name="theiaR"; version="0.4.0"; sha256="07m532r67cil2ya2w9lfhycrm8n0ga0r3x7jwbp5jbd83hw4l1p6"; depends=[askpass httr R6 raster XML]; }; - thematic = derive2 { name="thematic"; version="0.1.2"; sha256="0c5znjnlb7f6plklrq74yyqqwn1xzr64l6njv3g2w86myw86zavv"; depends=[farver ggplot2 rappdirs rlang rstudioapi scales]; }; + thematic = derive2 { name="thematic"; version="0.1.2.1"; sha256="1hr9373256n1rya3l2z2sqwfifypsh6wrs2s27aqchh9sm0blkmy"; depends=[farver ggplot2 rappdirs rlang rstudioapi scales]; }; themetagenomics = derive2 { name="themetagenomics"; version="1.0.2"; sha256="14i81cd9cyzhi3j2d9ygwlairkimhx8ffvva3pg3xwwvpywb6mla"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; - themis = derive2 { name="themis"; version="0.1.3"; sha256="0vs5jraw0xsby0rkl474iliqa2hc9pgmgr7isygmmh455zrl4gsq"; depends=[dplyr generics purrr RANN recipes rlang ROSE tibble unbalanced withr]; }; + themis = derive2 { name="themis"; version="0.1.4"; sha256="0zc7djygyiy1sjgvbznb6nqcglfnbybxaz5frphns92m7smqy0l9"; depends=[dplyr generics purrr RANN recipes rlang ROSE tibble unbalanced withr]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; thgenetics = derive2 { name="thgenetics"; version="0.4-2"; sha256="1314gry3xs9v4jy13g08q16qy4ax3s0bc7d74gi0wbpkgdrk3lql"; depends=[]; }; thickmatch = derive2 { name="thickmatch"; version="0.3.1"; sha256="0q7wpilbk8jm3q7m5hb114jpbv4ri1745v9sbdf222l6ymds6pia"; depends=[DiPs MASS plyr rcbalance]; }; @@ -16487,7 +17165,7 @@ in with self; { this_path = derive2 { name="this.path"; version="0.4.4"; sha256="0z8m0l1sknk5l4gn93f3im8lsr4dxzks8qx26sqsyf98kdi5qxw4"; depends=[]; }; thor = derive2 { name="thor"; version="1.1.2"; sha256="0r4kgzbydjb7z0j808g5zdkx5wmbqncqg453bqm4ylafpj5z79kv"; depends=[R6 storr]; }; thorn = derive2 { name="thorn"; version="0.2.0"; sha256="0sybjqwv9al5khkhhc7khbgr7n2vy6aggarh9n75mxpa8hn7j2qr"; depends=[htmlwidgets]; }; - threeBrain = derive2 { name="threeBrain"; version="0.1.9"; sha256="01s7v9l2g4k6yyq7h27dn3dlv8nwhbpbqwb73y472w54n8mrsrqg"; depends=[base64enc crayon digest dipsaus freesurferformats gifti htmltools htmlwidgets jsonlite oro_nifti R6 shiny stringr xml2]; }; + threeBrain = derive2 { name="threeBrain"; version="0.2.1"; sha256="187nmpafmidqdgsysr7z5825w0f0s16f8ll30bc1qmak9aga08i9"; depends=[digest dipsaus freesurferformats gifti htmlwidgets jsonlite oro_nifti R6 shiny stringr xml2]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; threejs = derive2 { name="threejs"; version="0.3.3"; sha256="1711h351nzxfkbbdwvfzyhciyvi9c6wx3jq1g97lzcqgnb45kivn"; depends=[base64enc crosstalk htmlwidgets igraph]; }; threesixtygiving = derive2 { name="threesixtygiving"; version="0.2.2"; sha256="0fnysgyq4gf23vqxwnzwb3f1cv1v1b2cb6z0kywb17mr57cbg7pv"; depends=[anytime curl dplyr httr janitor jsonlite purrr readr readxl tibble tidyr tidyselect]; }; @@ -16497,32 +17175,33 @@ in with self; { threshr = derive2 { name="threshr"; version="1.0.3"; sha256="1vs2jfvh1pjzyfz1s4w92sw13yz2nhc28gc3iyqz8a82rrdm4mdq"; depends=[revdbayes rust]; }; thriftr = derive2 { name="thriftr"; version="1.1.5"; sha256="1s8fn0imja6gh5bb0h2g1pmvkwk5v0dmpml9yvcd5dhz9lxy6vdj"; depends=[R6 rly stringi]; }; thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; - thurstonianIRT = derive2 { name="thurstonianIRT"; version="0.11.1"; sha256="18xasg21w4sd32nhhs138fk70z9kpyv1l3jsrzzav2zwfb7246fk"; depends=[BH dplyr knitr lavaan magrittr MplusAutomation mvtnorm Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidyr]; }; - tibble = derive2 { name="tibble"; version="3.1.1"; sha256="0qqfiwy7i2zjxwmz0xp1j1p88yycdg3lh377jkzz6zs6gsbd89ln"; depends=[ellipsis fansi lifecycle magrittr pillar pkgconfig rlang vctrs]; }; + thurstonianIRT = derive2 { name="thurstonianIRT"; version="0.12.0"; sha256="0gwaacvw0pw2m9qkqjjnvjdgz1zmy91y1cbvx8mpc9kvxlv28xxa"; depends=[BH dplyr knitr lavaan magrittr MplusAutomation mvtnorm Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders tibble tidyr]; }; + tibble = derive2 { name="tibble"; version="3.1.4"; sha256="0zqpg2haph0qi1x5r6wr083xckab9gw21jbr9spcr8xdf43hx1vk"; depends=[ellipsis fansi lifecycle magrittr pillar pkgconfig rlang vctrs]; }; tibbletime = derive2 { name="tibbletime"; version="0.1.6"; sha256="0pfph4pyjxkxrir5ca1sh7xz07dylqnq40w0qyqiyaj5s23mbbmb"; depends=[assertthat dplyr glue hms lifecycle lubridate purrr Rcpp rlang tibble tidyselect vctrs zoo]; }; tibblify = derive2 { name="tibblify"; version="0.1.0"; sha256="0mdi9x36nrlcbchl7b2rlf4j1k0y6c7657aznm7xa0396ciij5fk"; depends=[crayon purrr rlang tibble vctrs]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0.1"; sha256="0197f540fkcxx5blx9jjnbvwgdnsdv55znmvgdizdp8pqhsib6m0"; depends=[]; }; - tidyBF = derive2 { name="tidyBF"; version="0.5.0"; sha256="035ksx0hrdd7rvhag5brgn7wi27fw0rjxndjynmwngbap6db4fhh"; depends=[BayesFactor dplyr effectsize insight ipmisc metaBMA parameters performance rlang tidyr]; }; - tidyBdE = derive2 { name="tidyBdE"; version="0.1.0"; sha256="1rx04b2j9dij30wccyk87ln1l828b0d3jihs2spzbw94hxg1q7qh"; depends=[dplyr ggplot2 readr scales tibble]; }; - tidyCpp = derive2 { name="tidyCpp"; version="0.0.3"; sha256="0qx30yb26g664aw44kicck35vr8bzrxqnmfd0mlqzp0bly4az0xr"; depends=[]; }; - tidyHeatmap = derive2 { name="tidyHeatmap"; version="1.2.2"; sha256="1nbg3qqfa2cqjn58rq6bpny38z94j34f8m4lfsnw07k36vsdph8p"; depends=[circlize ComplexHeatmap dplyr lifecycle magrittr purrr RColorBrewer rlang tibble tidyr viridis]; }; + tidyBdE = derive2 { name="tidyBdE"; version="0.2.0"; sha256="1rmzsyj14kiwwfmifyw7xxrdc66fmlbs9mb0ng9m6i1zywq1896n"; depends=[dplyr ggplot2 readr scales tibble]; }; + tidyCpp = derive2 { name="tidyCpp"; version="0.0.5"; sha256="1ad10m831k0askr15yv6drmjh7rlg0py1ib8zmpsgj57v5s9wx3p"; depends=[]; }; + tidyHeatmap = derive2 { name="tidyHeatmap"; version="1.3.1"; sha256="107bfyjakqfiimnwdyl2nhvx1fjpzv693akvi5l0cai6vjs007wj"; depends=[circlize ComplexHeatmap dendextend dplyr lifecycle magrittr purrr RColorBrewer rlang tibble tidyr viridis]; }; tidyLPA = derive2 { name="tidyLPA"; version="1.0.8"; sha256="0jrvd92q20kzz83lid9vvdh0l3l1kbc4m77cim261gzra1p7w5y0"; depends=[dplyr ggplot2 gtable mclust mix MplusAutomation tibble]; }; tidyMicro = derive2 { name="tidyMicro"; version="1.47"; sha256="02pc6rh0l7xdrqhihi53zp17x0walc0mpm70spm7yrwzkbc486lv"; depends=[ade4 broom car cowplot dplyr Evomorph factoextra ggplot2 ggrepel gridExtra latex2exp lme4 lsr magrittr MASS Matrix plotly plyr png purrr rlang scales scatterplot3d shapes stringr ThreeWay tibble tidyr tidyverse vegan VGAM]; }; tidyREDCap = derive2 { name="tidyREDCap"; version="0.2.0"; sha256="03kx91avw6zbmrcxvhkb7i3syw3ajkv9ypvgn2iq3ki887vbiwzw"; depends=[dplyr janitor magrittr purrr rlang stringr tibble tidyr]; }; tidyRSS = derive2 { name="tidyRSS"; version="2.0.3"; sha256="0jyaa4b92cwf1vgrpy6ixq1jq46im8mr63z7ncjyx59j88v4pn84"; depends=[anytime dplyr glue httr jsonlite magrittr purrr rlang tibble tidyselect vctrs xml2]; }; - tidySEM = derive2 { name="tidySEM"; version="0.1.9"; sha256="0aqwfndybip7pb1j8bf5dpf6a3xm0cdy5majv6xrsvvjwsi1ya4d"; depends=[ggplot2 igraph lavaan MplusAutomation psych]; }; - tidyUSDA = derive2 { name="tidyUSDA"; version="0.3.1"; sha256="0kr9zjlqy9h1kx5iq3y57va8zrvrb3x6sp8j0yhpa6cymlblcrfn"; depends=[brio crayon curl diffobj dplyr fuzzyjoin ggplot2 gitcreds httr jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis waldo]; }; - tidybayes = derive2 { name="tidybayes"; version="2.3.1"; sha256="055146k63b0dgkj6s6d9rwmdszxnjs4l6l4chavip9zwhrjsl93y"; depends=[arrayhelpers coda dplyr forcats ggdist ggplot2 magrittr plyr purrr rlang tibble tidyr tidyselect]; }; + tidySEM = derive2 { name="tidySEM"; version="0.1.10"; sha256="12i3d48z8y5r4v8pkswlnq9jng9065xy6aflnna5hl0jh93wa4rp"; depends=[ggplot2 igraph lavaan MplusAutomation OpenMx psych]; }; + tidyUSDA = derive2 { name="tidyUSDA"; version="0.3.2"; sha256="092zy2k2hajr0g47r7ngsm089j4y70q7biwyhsiz3vfmpg3s3ijb"; depends=[crayon dplyr fuzzyjoin ggplot2 httr jsonlite magrittr purrr sf tigris]; }; + tidybayes = derive2 { name="tidybayes"; version="3.0.1"; sha256="1drgjqcrcxx0jwaj9c0a5j0f6v793pq8rjcw8cv3zc438apfmdsm"; depends=[arrayhelpers coda dplyr ggdist ggplot2 magrittr posterior rlang tibble tidyr tidyselect vctrs withr]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; - tidycat = derive2 { name="tidycat"; version="0.1.1"; sha256="04binzg0wijs173y8fr856935vdl80pid5d0zknb34fdaqa07kfh"; depends=[dplyr forcats magrittr stringr tibble tidyr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.11.4"; sha256="023p1l81w5p45a9ixl07d6mc5749ps99llb2j08f5yppllavfqxx"; depends=[dplyr httr jsonlite purrr rappdirs readr rlang rvest sf stringr tidyr tigris units xml2]; }; + tidycat = derive2 { name="tidycat"; version="0.1.2"; sha256="1c8ib5zcz2xk7yrzh4j5q4ccv6lnw58sh2ggqn04k2wp0gcj2zcs"; depends=[dplyr forcats magrittr stringr tibble tidyr]; }; + tidycensus = derive2 { name="tidycensus"; version="1.1"; sha256="1h32f1qgb7fnlbmqdkgl98cql06ds5r25ad3zbqrcs58ckngs549"; depends=[crayon dplyr httr jsonlite purrr rappdirs readr rlang rvest sf stringr tidyr tigris units xml2]; }; + tidycharts = derive2 { name="tidycharts"; version="0.1.2"; sha256="0afdd5rdpwpyciangybwxahfjivqm13i3az2wzaky4s6mv68x6bd"; depends=[dplyr htmlwidgets lubridate magick magrittr rlang rsvg stringr testthat]; }; tidycode = derive2 { name="tidycode"; version="0.1.1"; sha256="0ahjhn1ar93xnd1snxnivdl43d1b6ica0pc30rgh8jpha87zbsay"; depends=[glue matahari pryr purrr rlang tibble]; }; - tidycomm = derive2 { name="tidycomm"; version="0.1.0"; sha256="0xas6nr7fy612r0b5h8ncvirxhzy099zvhdzxbnskm3sa21046ni"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; + tidycomm = derive2 { name="tidycomm"; version="0.2.1"; sha256="1h1xixa7fbijp1iifpwl689b1pz1vvpy7v4sc9wnkqgw0q31b3iy"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; tidycwl = derive2 { name="tidycwl"; version="1.0.5"; sha256="1ii23iamqmplsmnjnr6x9a1wjrbk82r0ywbskfifv26i66wyjqc3"; depends=[dplyr htmlwidgets jsonlite magrittr visNetwork webshot yaml]; }; tidydice = derive2 { name="tidydice"; version="0.1.1"; sha256="1iagm3avd0ncnd2jrx1mgri96gcv3bs7vbn2qdq44idv222k9igd"; depends=[assertthat dplyr ggplot2 magrittr purrr tibble]; }; + tidyestimate = derive2 { name="tidyestimate"; version="1.1.0"; sha256="0cwk6clah4sapbmfl5vvcv6di39azxb07z73pypnqx4gd32kk5q7"; depends=[dplyr ggplot2 ggrepel glue rlang]; }; tidyfast = derive2 { name="tidyfast"; version="0.2.1"; sha256="1bfs2wma705nx1lpndq75ama5dr9kkg8hwpklb20csnccnfrlvf6"; depends=[data_table Rcpp]; }; - tidyfst = derive2 { name="tidyfst"; version="0.9.9"; sha256="1f90wld3nxnr8jyjl7l1agk2m2sbzw70mybax56z99zz28i87bba"; depends=[data_table fst stringr]; }; + tidyfst = derive2 { name="tidyfst"; version="1.0.0"; sha256="17msq5sxm4ng9x8kkndz4l29xj770640xhhphffrxxb5ans2b789"; depends=[data_table fst stringr]; }; tidyft = derive2 { name="tidyft"; version="0.4.5"; sha256="0l6ixaqj356q319ms0bf655f530cgiia9saqdx9lryaf0b6i2hxb"; depends=[data_table fst stringr]; }; tidygapminder = derive2 { name="tidygapminder"; version="0.1.1"; sha256="1m6bynwnw1msrzvdmy12w3ympinqpd8j3may3rwmg9941nndjv2d"; depends=[data_table dplyr readxl tidyr]; }; tidygate = derive2 { name="tidygate"; version="0.4.7"; sha256="0g5k136bgcvs9hzach3wlf97npdgy52anx7m7xjg6ixgf9rvqw70"; depends=[dplyr lifecycle magrittr purrr RColorBrewer rlang scales stringr tibble tidyr viridis]; }; @@ -16530,8 +17209,9 @@ in with self; { tidygeoRSS = derive2 { name="tidygeoRSS"; version="0.0.1"; sha256="0bppkwbxmm8ps1cnrhzxkzm2pbi3s5bfiwx8fcrp31x81jl61w1x"; depends=[anytime dplyr httr jsonlite magrittr purrr rlang sf strex stringr tidyRSS xml2]; }; tidygeocoder = derive2 { name="tidygeocoder"; version="1.0.3"; sha256="04qwr011i7j6azih26z69275h4afr22b4wlacmi96ddcfpyidk2i"; depends=[dplyr httr jsonlite lifecycle tibble]; }; tidygraph = derive2 { name="tidygraph"; version="1.2.0"; sha256="17qjns33zcj82jcsl7bn7i4zxcm7ric50zyf7agi0i01zi16qz85"; depends=[dplyr igraph magrittr pillar R6 Rcpp rlang tibble tidyr]; }; - tidyhydat = derive2 { name="tidyhydat"; version="0.5.2"; sha256="0yrd4x17918v8nkm1y9r334b0kvrklj313w8sjcx6402435nvmwj"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; + tidyhydat = derive2 { name="tidyhydat"; version="0.5.4"; sha256="0pkh6pd8rvjlang5zf15c2ca465shi46ks3mbzyymdy5sdj63hdf"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; tidyjson = derive2 { name="tidyjson"; version="0.3.1"; sha256="1rx5ncp20j9mhcziyqb0vgfq9061qylgvfwz27dsyz58r8fygwnq"; depends=[assertthat dplyr jsonlite magrittr purrr rlang tibble tidyr]; }; + tidylda = derive2 { name="tidylda"; version="0.0.1"; sha256="1w53zjz0ckn2qhgichak54j2i4anbhcb8mdg37f0kqiygavxdkmx"; depends=[dplyr generics gtools Matrix mvrsquared Rcpp RcppArmadillo RcppProgress RcppThread rlang stringr textmineR tibble tidyr tidytext]; }; tidylo = derive2 { name="tidylo"; version="0.1.0"; sha256="135aw7zqgxz7l3zgskhzy72lgm1xwl50566s0s45dq7h6ah0vi5d"; depends=[dplyr rlang]; }; tidylog = derive2 { name="tidylog"; version="1.0.2"; sha256="076am30ayc16wm3bilznxqzd5806yi7dx5m9yv4w7q90i7imsqk7"; depends=[clisymbols dplyr glue tidyr]; }; tidymodels = derive2 { name="tidymodels"; version="0.1.3"; sha256="18vz0xsgxrfzcfxpvilhj1w0f4v4lx5ws37nwmy40lhv3v05nxn8"; depends=[broom cli conflicted dials dplyr ggplot2 infer modeldata parsnip purrr recipes rlang rsample rstudioapi tibble tidyr tune workflows workflowsets yardstick]; }; @@ -16548,19 +17228,21 @@ in with self; { tidyr = derive2 { name="tidyr"; version="1.1.3"; sha256="0cpbrvr759z8p7r9lpkjhj2dcdymsbnaib0rma9b4jb7i3qzmh2a"; depends=[cpp11 dplyr ellipsis glue lifecycle magrittr purrr rlang tibble tidyselect vctrs]; }; tidyrules = derive2 { name="tidyrules"; version="0.1.5"; sha256="04y6pnrp132sckjpp9g8yl0z7glcsx9dcfdpa8r27wsc2g491i63"; depends=[assertthat magrittr partykit purrr stringr tibble]; }; tidyselect = derive2 { name="tidyselect"; version="1.1.1"; sha256="0ss8mq05mwif64cj8zmrfx0ljgy3n0fvyv7f37782shr8rknmsqq"; depends=[ellipsis glue purrr rlang vctrs]; }; - tidyseurat = derive2 { name="tidyseurat"; version="0.2.0"; sha256="00kn6rkbs0br6lkyw0z645594a7alrdzh2njcqjgbfpp444riwg7"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang Seurat stringr tibble tidyr tidyselect]; }; + tidyseurat = derive2 { name="tidyseurat"; version="0.2.7"; sha256="0jgkh54acyvjmnw8cafxb4crlf8cw2y2vvladi5cwkmc2iln28jc"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang Seurat SeuratObject stringr tibble tidyr tidyselect]; }; + tidysq = derive2 { name="tidysq"; version="1.1.2-1"; sha256="14gsm4hlm9vd85wpsgvk2w5hzmjayxs5ryh1j8zx2rsp98ypxrcm"; depends=[checkmate cli crayon dplyr pillar Rcpp testthat tibble vctrs]; }; tidystats = derive2 { name="tidystats"; version="0.5"; sha256="0shvrrqd5c89d4pncbqa80kzzf9v31drm170hiivjscldphkk43h"; depends=[dplyr jsonlite purrr readr stringr tibble tidyr]; }; tidystringdist = derive2 { name="tidystringdist"; version="0.1.4"; sha256="1srxh5gyspcghzvnmpyq36ky608ipf71vv0s1jg01mgf2i5pdkf4"; depends=[attempt rlang stringdist tibble]; }; tidysynth = derive2 { name="tidysynth"; version="0.1.0"; sha256="0rckvp51gp22bjcwcszdhhn51bzjivwndnvjcf67h1vmyqa3zjkj"; depends=[dplyr forcats ggplot2 kernlab LowRankQP magrittr optimx rgenoud rlang tibble tidyr]; }; - tidytable = derive2 { name="tidytable"; version="0.6.1"; sha256="0ghg6694g2q2kc31qy4cnv1jp4s8ry4n7iqlj44w54khj87acl88"; depends=[data_table glue lifecycle magrittr pillar rlang tidyselect vctrs]; }; + tidytable = derive2 { name="tidytable"; version="0.6.5"; sha256="1k8zl5hxbmizas8lhcp5nzqis7wikn9bbdjwjkc6cpzbpr722bd3"; depends=[data_table glue lifecycle magrittr pillar rlang tidyselect vctrs]; }; tidytext = derive2 { name="tidytext"; version="0.3.1"; sha256="182gad5pzz6zvhbla3d496sxwiszc1qz8kzzkksaacwpsrc61f9h"; depends=[dplyr generics hunspell janeaustenr lifecycle Matrix purrr rlang stringr tibble tokenizers vctrs]; }; tidytidbits = derive2 { name="tidytidbits"; version="0.2.3"; sha256="1sia4bxfnb0hw047l6hl013si3iaisac51lp9b42m22hcxzxwgx0"; depends=[dplyr extrafont forcats magrittr purrr rlang stringr tibble tidyr tidyselect]; }; - tidytransit = derive2 { name="tidytransit"; version="0.7.3"; sha256="17ap5rffaz99fm23887m59ysvpynx1ia6n8cd9b1il340dm4d455"; depends=[assertthat checkmate data_table digest dplyr hms httr lubridate readr rlang sf tibble tidyr zip]; }; - tidytree = derive2 { name="tidytree"; version="0.3.3"; sha256="05b53dap0f784kl6s1wgck6m7brwmy6ifqp7v5l06s1spfspagl6"; depends=[ape dplyr lazyeval magrittr rlang tibble]; }; + tidytransit = derive2 { name="tidytransit"; version="1.1.0"; sha256="0z4xiz8afvsqcc4x7ac1p6y60lwx5yr1s78mi7a0c322lc80yfln"; depends=[checkmate data_table digest dplyr geodist gtfsio hms httr lubridate readr rlang sf tibble tidyr zip]; }; + tidytreatment = derive2 { name="tidytreatment"; version="0.2.1"; sha256="09d9qiwb1mniwfyklkiylr1glix1f441kkxlbff2x99j1xij197x"; depends=[dplyr purrr readr rlang tidybayes tidyr]; }; + tidytree = derive2 { name="tidytree"; version="0.3.5"; sha256="0zk46n3nh577k2jy34isdw845hk0blkvqk7rg5nmix5b65qsp762"; depends=[ape dplyr lazyeval magrittr rlang tibble tidyr tidyselect]; }; tidytuesdayR = derive2 { name="tidytuesdayR"; version="1.0.1"; sha256="0slpfajv5cxqxfb1sh98574zrcgihiazscpr0zga2i6kiwn3kgpy"; depends=[httr jsonlite lubridate magrittr purrr readr readxl rstudioapi rvest usethis xml2]; }; tidyverse = derive2 { name="tidyverse"; version="1.3.1"; sha256="0ck6xmsw5p168jmw2fqv79fzfnw5jckfra7mfii261j6kl89bkw3"; depends=[broom cli crayon dbplyr dplyr dtplyr forcats ggplot2 googledrive googlesheets4 haven hms httr jsonlite lubridate magrittr modelr pillar purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyvpc = derive2 { name="tidyvpc"; version="1.1.0"; sha256="09x684p2059by76b9ba9bxsyfjly0ykia43fhkpq63fbcbg7p8wg"; depends=[classInt data_table ggplot2 magrittr quantreg rlang]; }; - tidywikidatar = derive2 { name="tidywikidatar"; version="0.2.0"; sha256="1kcrcxly51nk4ffb08f2m8088f2y5hv0jz2fma81hlbxrpswf1g7"; depends=[DBI dplyr fs glue magrittr purrr rlang RSQLite stringr tibble tidyr usethis WikidataQueryServiceR WikidataR]; }; + tidywikidatar = derive2 { name="tidywikidatar"; version="0.4.2"; sha256="006rcm8g5vqrbwvviaclynzrapff8yclqkmq3hkdljm5v972g5gj"; depends=[DBI dplyr fs glue jsonlite magrittr progress purrr rlang RSQLite stringr tibble tidyr usethis WikidataQueryServiceR WikidataR]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.7"; sha256="1wg8h5fd2hd8ilshrbcs99q18p15687dx8j51v5pyd30pg5cab7b"; depends=[piton Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-8"; sha256="18m17g5q3nz4v4wrqxnb129b1j02873g2vknddczkklf1pvq4x2b"; depends=[]; }; tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; @@ -16569,9 +17251,9 @@ in with self; { tigger = derive2 { name="tigger"; version="1.0.0"; sha256="12mcq3mvmcpmb7cc0c3sij03wa9i37c3ilxpa3fm2cr3g3yj2r1v"; depends=[alakazam doParallel dplyr foreach ggplot2 gridExtra gtools iterators lazyeval rlang shazam stringi tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.1"; sha256="0vqkp2g6z8y3b6dhzglmacjhf2qi1sg80kb941mwfafin2k40zbm"; depends=[]; }; tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.5"; sha256="0izgx1khci6qc6pz85dxj75kzxvpr30l0vhcv9476jrcbwqs4k8m"; depends=[DBI RSQLite]; }; - tigris = derive2 { name="tigris"; version="1.0"; sha256="00s4cl3zgc2cqg845sxr2lcqqsvz72sa08zrrfmia1ngqxl6biwp"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; + tigris = derive2 { name="tigris"; version="1.5"; sha256="0wj4q09k4nwl1kj7r05ivhdy4vp8x1hfblc6xsbnpb8p72l1rxsy"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; tikzDevice = derive2 { name="tikzDevice"; version="0.12.3.1"; sha256="040yz6wi05151m9nal97symv66a133kk0a8c1h6nz058zk081vav"; depends=[filehash png]; }; - tiledb = derive2 { name="tiledb"; version="0.9.0"; sha256="16s4ldbsf6f1b83myzhv9g38f5p05cdcy29yi3dsry7z6841sr1q"; depends=[nanotime Rcpp]; }; + tiledb = derive2 { name="tiledb"; version="0.9.6"; sha256="01vgmkiykm51m8y5kfwi88hnq0bi5i83dwn2z722iv7xj3syvxlz"; depends=[nanotime Rcpp]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; tilemaps = derive2 { name="tilemaps"; version="0.2.0"; sha256="06pwwlndb7nvw2b0h0fak3vnpbi11mxsby43qm9ng3k3sqwrqjz2"; depends=[clue ggplot2 igraph lwgeom sf smoothr]; }; tiler = derive2 { name="tiler"; version="0.2.5"; sha256="02sxc70s8v5b5lf1fpv1ig1hmpkamsmzbgpk6zds504gh9kz7qxy"; depends=[png raster rgdal sp]; }; @@ -16589,7 +17271,7 @@ in with self; { timelineS = derive2 { name="timelineS"; version="0.1.1"; sha256="076w8ckzzl59bc1gnwjgdwynnz86320hyfmzb0k26hl3k13jlmxs"; depends=[dplyr ggplot2 lubridate magrittr]; }; timeordered = derive2 { name="timeordered"; version="0.9.9"; sha256="0rfga5i6kckmlz2dzqb1pp634dl93wxp7v3kisxlbjl7mgnbck3k"; depends=[igraph plyr]; }; timeperiodsR = derive2 { name="timeperiodsR"; version="0.6.2"; sha256="09vwp04j7n176xs1lbdmbyi557byx6fdvqyjay1785hkb9ivws5q"; depends=[lubridate]; }; - timereg = derive2 { name="timereg"; version="1.9.8"; sha256="065vlsgs5xm11w13837jdvi9jxfa6j2vxpcp2r6hgrs38xv01ch0"; depends=[lava numDeriv survival]; }; + timereg = derive2 { name="timereg"; version="2.0.0"; sha256="030p8s7f9m5dlp03q9fnb5j9i71dd688xpnq0rmd23x8whd72s1a"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; timeseriesdb = derive2 { name="timeseriesdb"; version="0.4.1"; sha256="1ghb3lg63fs9zx34l5qczv39mdccnmqzlc74l1zhb8qmsg8sm1g2"; depends=[data_table DBI jsonlite openxlsx RPostgreSQL shiny xtable xts zoo]; }; timetk = derive2 { name="timetk"; version="2.6.1"; sha256="1yf0b8rpk0nmvvhz0hgj6mykr0kml0kh8f13xpzadwp9n0i0r3mw"; depends=[anytime assertthat dplyr forcats forecast generics ggplot2 hms lubridate padr plotly purrr readr recipes rlang rsample slider stringi stringr tibble tidyr tidyselect timeDate xts zoo]; }; @@ -16598,27 +17280,28 @@ in with self; { timevis = derive2 { name="timevis"; version="1.0.0"; sha256="003kizf974xibj90n60ipzwnrbdwjb659yxwi2xfnvh067aibwsp"; depends=[htmltools htmlwidgets jsonlite lubridate magrittr rmarkdown shiny]; }; timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; }; timsac = derive2 { name="timsac"; version="1.3.6"; sha256="186919qka9j3kfpdw2gbh16n48d6xgz9lfqgk4b17f1d7l72iplg"; depends=[]; }; - timsr = derive2 { name="timsr"; version="0.0.2"; sha256="1v8yb92z4vpybyzldc9gknk4x1mxd5xzi9zccl13avrx6h2yjazq"; depends=[data_table opentimsr]; }; + timsr = derive2 { name="timsr"; version="0.0.3"; sha256="1n9xq01rfk5v0x0r8cr481s93nh99nf3kshb41d43r7zdw2dcwfi"; depends=[data_table opentimsr]; }; tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; tint = derive2 { name="tint"; version="0.1.3"; sha256="00830n5nl6p73v9w0yzsak56phz4w1fh5lhf1c42gg1i81x7swnx"; depends=[htmltools knitr rmarkdown]; }; tinter = derive2 { name="tinter"; version="0.1.0"; sha256="02hfw2720qn70x0piahm8cy2ajsb5bqapr4vyvknm4v1yka1wmw3"; depends=[chk]; }; tinyProject = derive2 { name="tinyProject"; version="0.6.1"; sha256="0cflnfp5mib3j1y3n5yvi867h5a7z6xr6163gq9y9b6nrl2skxfk"; depends=[brew R_utils]; }; + tinyarray = derive2 { name="tinyarray"; version="2.2.6"; sha256="0k99i0k1l5bjh08pgsxcanq74zw7hraawc679km6bblhh7yag2az"; depends=[BiocManager clusterProfiler dplyr ggplot2 limma org_Hs_eg_db patchwork pheatmap stringr survival survminer tibble]; }; tinylabels = derive2 { name="tinylabels"; version="0.2.1"; sha256="1gvj8l6lvhjxx6fpk825jdgwq34ikm4wmjicyn486spxjc81bw85"; depends=[]; }; - tinyscholar = derive2 { name="tinyscholar"; version="0.1.2"; sha256="0h21b35mxbpr7kn01994nlaxl7qag1ngiry1y7gd0i5q56vrl0zm"; depends=[curl dplyr ggplot2 gt jsonlite magrittr purrr R_utils rlang rvest stringr xml2]; }; + tinyscholar = derive2 { name="tinyscholar"; version="0.1.3"; sha256="0m2m6x7z6vx1b4cri3si445rw9dj66mh164q7an26d20y2yfk1cb"; depends=[curl dplyr ggplot2 gt jsonlite magrittr purrr R_utils rlang rvest stringr xml2]; }; tinyspotifyr = derive2 { name="tinyspotifyr"; version="0.2.2"; sha256="19nicp1ml73lylja2np52rcc070maxm9286fjm7bfx3zsblxmakc"; depends=[httr jsonlite]; }; - tinytest = derive2 { name="tinytest"; version="1.2.4"; sha256="1asryjrah3fj39gg0c6yxgpr142j5bg2n990v7q8r0a5pb8gcr45"; depends=[]; }; - tinytex = derive2 { name="tinytex"; version="0.31"; sha256="04a3ncaxix30n9m73slpsn1idxv7j1f7fy3nhxpvkk514x9rgg0p"; depends=[xfun]; }; + tinytest = derive2 { name="tinytest"; version="1.3.1"; sha256="1mq31f7bzcz5bkgzl9khm1i80axfzra7gcjqxd2yqb4wrw1m3x4s"; depends=[]; }; + tinytex = derive2 { name="tinytex"; version="0.33"; sha256="10lqn704dqv5k5v6y964l8c77rwy4ilrc1hcb99j4vxpx3p4nd43"; depends=[xfun]; }; tipitaka = derive2 { name="tipitaka"; version="0.1.2"; sha256="0xf64bpzwywwjm0135c7zjn4ha0h1zj36rj2d4h8dskiq9z90xqi"; depends=[cpp11 dplyr magrittr stringi stringr]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tippy = derive2 { name="tippy"; version="0.1.0"; sha256="00c9v07ax7l0x5wpx3ca8hqvdqs3p62d58igp51rsbh9x1ylgjcn"; depends=[htmltools htmlwidgets jsonlite shiny]; }; - tipr = derive2 { name="tipr"; version="0.2.0"; sha256="1gkdajyhpapfq531mdpc6jj12b1kmrzq5f6jlcm4lxinwf6jvsgq"; depends=[glue purrr tibble]; }; + tipr = derive2 { name="tipr"; version="0.3.0"; sha256="1iaj3cklq12xr7xbvkam0mjnq3g2rcmwy1m3kdm26qm793082nyz"; depends=[glue purrr tibble]; }; tis = derive2 { name="tis"; version="1.38"; sha256="0mqnvjfncfr8zc5rz1qq8jr1kv63p7sva7fvr3adbs7lgjza0yvm"; depends=[]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; titeIR = derive2 { name="titeIR"; version="0.1.0"; sha256="047vidn3zydbjijwgz6qm2d9j2ny8ng2sv5jzm8zb300y7k2426c"; depends=[Iso]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; - tkRplotR = derive2 { name="tkRplotR"; version="0.1.5"; sha256="0klfbi9ym6nsv2vjb6kiqf1vd6g0z33p41viqvr53r7qx8hx1bsr"; depends=[]; }; + tkRplotR = derive2 { name="tkRplotR"; version="0.1.7"; sha256="1n8ihn6ys68dzfxi1wqdbq00qm41fwjw2vn9i3wyb4w1j73v82zy"; depends=[]; }; tkrplot = derive2 { name="tkrplot"; version="0.0-25"; sha256="0p7d26k8d4204y1j3j9x8n1jcak7amnw1822pywkhj02ks30xbi1"; depends=[]; }; - tktdjl2r = derive2 { name="tktdjl2r"; version="0.2.0"; sha256="0qp7qki9kgddiis64cm894kkk6770qjh8v1b2f91smmpk3m7l321"; depends=[JuliaCall stringr]; }; + tldr = derive2 { name="tldr"; version="0.2.3"; sha256="0xagl35kz6vpqzxdgpmvjafgqrln07k65gnw8kfykj4rg7blfsxq"; depends=[ggplot2 reshape2 tableone]; }; tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; }; tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; }; @@ -16630,84 +17313,88 @@ in with self; { tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-10"; sha256="0v14fj3r438pvs88k4zwlzkgax8r0k6cx4mqjnzzad15frqficij"; depends=[DSL NLP slam tm]; }; tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; }; tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.8"; sha256="1gdkflz2g1vmqzv4p65w6zfynnx0fls7xyvhzg4li4kjg2xf6l75"; depends=[NLP rvest tm xml2]; }; - tm_plugin_koRpus = derive2 { name="tm.plugin.koRpus"; version="0.4-1"; sha256="09vp9qpdpfyq5z2qpx067a7ckygibbpwr79rn59664nflq3y01vi"; depends=[koRpus NLP sylly tm]; }; + tm_plugin_koRpus = derive2 { name="tm.plugin.koRpus"; version="0.4-2"; sha256="132w4rji68y1ddy93844n2ks5z059a16lqy71vcrxm6wcdn2w3hq"; depends=[koRpus NLP sylly tm]; }; tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.4.1"; sha256="0c094z83mcq8blc8w7kvy91d28qqcx6f6193p3frpviznlaq21xk"; depends=[ISOcodes NLP tm xml2]; }; tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.2-1"; sha256="0rn8jqv622qmc0zkz534ka5qnbca2rlabxm3vjbqplr6fh1ahwb1"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; tm1r = derive2 { name="tm1r"; version="1.1.8"; sha256="15w703rd7mfm32b62yv9mpms2fjq9ifmc1n460vsrpqz1dkiavb9"; depends=[httr jsonlite]; }; - tmap = derive2 { name="tmap"; version="3.3-1"; sha256="0w2hd8kdidyxz1rvqg1migfb1mnijlkbs4yyykxqn5plqw0l9yb2"; depends=[abind classInt htmltools htmlwidgets leafem leaflet leafsync RColorBrewer rlang sf stars tmaptools units viridisLite widgetframe]; }; + tmap = derive2 { name="tmap"; version="3.3-2"; sha256="16k2nh4b4rkiid5ny97n22wn89pvh4sn6pdykbbj6qjlqp2p9jrb"; depends=[abind classInt htmltools htmlwidgets leafem leaflet leafsync RColorBrewer rlang sf stars tmaptools units viridisLite widgetframe]; }; tmaptools = derive2 { name="tmaptools"; version="3.1-1"; sha256="0bal3czrdr93qig8s5cf5szld5vjbbks67rismfhlkmlgw6wp2gx"; depends=[dichromat lwgeom magrittr RColorBrewer sf stars units viridisLite XML]; }; tmbstan = derive2 { name="tmbstan"; version="1.0.2"; sha256="1g4b415k36wij028xz15kwpv8hmx92kznsp231bnrprzw2vrninr"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-13"; sha256="0rf8mz6kdm83pm85kzfyzb8kd3iwaxv5bgphjpxlnq6z32m9yds7"; depends=[]; }; - tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; - tmhmm = derive2 { name="tmhmm"; version="1.3"; sha256="1grlwflfljwhanzc1cy2jw5wxrzl36x4zpr1mkm1bm44ilqryqx0"; depends=[ggplot2 rappdirs stringr tibble]; }; - tmle = derive2 { name="tmle"; version="1.5.0-1"; sha256="14rxdsqrjqr1vl0qy4hjpp1mchyn58za673hjc9r3n20591zghcz"; depends=[glmnet SuperLearner]; }; + tmle = derive2 { name="tmle"; version="1.5.0.2"; sha256="1m1zz48cp8agxswgrwvvzdh50kyyc84hw328nyhbbnfkx19c6wj7"; depends=[glmnet SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; tmod = derive2 { name="tmod"; version="0.46.2"; sha256="139znivmsm7hr5hiiq7f9vab5hm0bzqf2qfs69n340gf1dgpyrd2"; depends=[beeswarm colorDF gplots plotwidgets RColorBrewer tagcloud XML]; }; + tmplate = derive2 { name="tmplate"; version="0.0.3"; sha256="1w04bmir23ip3c7janix8i2qhdnmlg78jrrjlykl95vnsvjwld6g"; depends=[tRnslate]; }; tmpm = derive2 { name="tmpm"; version="1.0.3"; sha256="1fqk39zyc07gh0ygi7pfljlnj6ih37jsb7bcxm05zcd4796wil8j"; depends=[reshape2]; }; tmt = derive2 { name="tmt"; version="0.2.1-0"; sha256="1drb0z9jk76ixn3qw7xb5rirfc9h0frkhl1krs681aiaspqkgswj"; depends=[ggplot2 Rcpp]; }; - tmuxr = derive2 { name="tmuxr"; version="0.2.4"; sha256="0wz33sgnmcsrd1z7nsskqjhngwjkyvqd7isxcrxzkwd33naa8144"; depends=[processx]; }; tmvmixnorm = derive2 { name="tmvmixnorm"; version="1.1.1"; sha256="0i1g3598d43azyy1bsrvkjybqa5cd991fpmfqi5wv5703zaha2fj"; depends=[MASS]; }; tmvnsim = derive2 { name="tmvnsim"; version="1.0-2"; sha256="03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp"; depends=[]; }; tmvtnorm = derive2 { name="tmvtnorm"; version="1.4-10"; sha256="1w3kmpx25l7rb80vpclqq4pbbv12qgysyqxjq3lp55l9nklkb7qs"; depends=[gmm Matrix mvtnorm]; }; tnet = derive2 { name="tnet"; version="3.0.16"; sha256="0922y9zb64zazl2irwfxxbghkgcwi2q57gylpiaxgmj4q6lc62l9"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="1.1-0.0"; sha256="0zg4zk7jx8s57g8nb0jw7r7gss00349jmkglf6sz26p7jldpgmff"; depends=[crayon testthat]; }; - todor = derive2 { name="todor"; version="0.1.1"; sha256="13idn5wq8r9m7yx4wnbazp5lnc3bpx4gh6chcq7abj53ms734pc3"; depends=[rex rstudioapi stringr]; }; + todor = derive2 { name="todor"; version="0.1.2"; sha256="1ncg88wh9l2mja5w53ry2b19sa5x9m6cnkvw8lszbmc92idpspig"; depends=[R_utils rex rstudioapi stringr]; }; togglr = derive2 { name="togglr"; version="0.1.33"; sha256="105c9vxa67bqccj31ksk5myfd0v7v0wbz6qqjhxqndlg7v6ggfzc"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr parsedate prettyunits purrr rstudioapi]; }; tokenbrowser = derive2 { name="tokenbrowser"; version="0.1.5"; sha256="17hbkcan74j4fkk4j1xcgikaanp3xhs5njjxkapg2yjdhmf2dng6"; depends=[Rcpp stringi]; }; tokenizers = derive2 { name="tokenizers"; version="0.2.1"; sha256="006xf1vdrmp9skhpss9ldhmk4cwqk512cjp1pxm2gxfybpf7qq98"; depends=[Rcpp SnowballC stringi]; }; tokenizers_bpe = derive2 { name="tokenizers.bpe"; version="0.1.0"; sha256="1pwgjrzdcsafpv9rlyly6fckcjiymz0xcjm9byavj069kc4c69mi"; depends=[Rcpp]; }; tolerance = derive2 { name="tolerance"; version="2.0.0"; sha256="001snzr2ipag3zprynydlbi9prkjzrllc054qh7m0qwkb3r19jjd"; depends=[MASS rgl]; }; - tongfen = derive2 { name="tongfen"; version="0.3"; sha256="14f7bw67yvp2g0ll5g39fjq744calkj5hkbm9q8k0y07arg8jsf0"; depends=[dplyr geojsonsf lifecycle lwgeom purrr readr rlang sf stringr tibble tidyr]; }; + tongfen = derive2 { name="tongfen"; version="0.3.3"; sha256="0hn2zmb5fa390bbwg03mxzlp3qc5pr61qxm6gjydja29gcpvbk9m"; depends=[dplyr lifecycle PROJ purrr readr rlang sf stringr tibble tidyr]; }; toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; tools4uplift = derive2 { name="tools4uplift"; version="1.0.0"; sha256="1izm9q2bj9l2nd9jn0fi3lf9hscfa0vmib58ypgpjsbsn0nd7p2h"; depends=[BiasedUrn dplyr glmnet latticeExtra lhs]; }; topicdoc = derive2 { name="topicdoc"; version="0.1.0"; sha256="0qliy6y8l09nblch1swlywam2awzwjl5xx0w8c3kiz48jxfysw0j"; depends=[slam topicmodels]; }; topicmodels = derive2 { name="topicmodels"; version="0.2-12"; sha256="1d6iizmn042b59q2y6qc82z19wq3xm0zvgkf8iqf8fdzh51kmn5g"; depends=[modeltools slam tm]; }; topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; }; topoDistance = derive2 { name="topoDistance"; version="1.0.1"; sha256="055z3gvqlb8nyy58ix89w7miav9gj3h43a4wcfc3kagd97xc3222"; depends=[gdistance igraph plotly raster RColorBrewer scales sp]; }; - topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; + topologyGSA = derive2 { name="topologyGSA"; version="1.4.7"; sha256="073n8bkrapk6il3izqr3bmcdp7yc29yzpbyzh6fvy9rg0x4d3g0z"; depends=[fields graph gRbase qpgraph]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; tor = derive2 { name="tor"; version="1.1.2"; sha256="1s34hzw3a4cm9gk85fcxgxwmn2xc7njs1iw1snd91id3gdl6vppx"; depends=[fs readr rlang tibble]; }; - torch = derive2 { name="torch"; version="0.3.0"; sha256="069z8lajinwizgh1i28pjpyhc965hhxlwb8ynaajcllvfg9wxv4v"; depends=[bit64 callr cli coro magrittr R6 Rcpp rlang withr]; }; - torchaudio = derive2 { name="torchaudio"; version="0.1.1.0"; sha256="1lrdx7x0q6pgsxclfcdbrv7ylxn3p1p222avdmwndgrr5q9zvm8j"; depends=[fs glue rappdirs rlang torch]; }; + torch = derive2 { name="torch"; version="0.5.0"; sha256="1fb24n4xcxywn8gg7xfcnf1pidkqjc0kn2s1hxapffaya58q1qg2"; depends=[bit64 callr cli coro ellipsis magrittr R6 Rcpp rlang withr]; }; + torchaudio = derive2 { name="torchaudio"; version="0.2.0"; sha256="1bzx428lzjdwb9ds2pcq7nlalg75s7bvmiimjw3k8lvbq50yjlyh"; depends=[fs glue rappdirs Rcpp rlang torch withr]; }; torchdatasets = derive2 { name="torchdatasets"; version="0.0.1"; sha256="0mhnvwb5wcf1kd0hks1d5qjsc642qmzlldajiysdz69idnzjfdxv"; depends=[fs pins stringr torch torchvision zip]; }; - torchvision = derive2 { name="torchvision"; version="0.3.0"; sha256="18sq3i28pm92vc9ka2jb67lxmgpclc26z402zvmvwz2m6hl0pvg3"; depends=[abind fs jpeg png rappdirs rlang torch]; }; + torchvision = derive2 { name="torchvision"; version="0.4.0"; sha256="0ndncq6qn54lp681khlhrwhywjnhi2wwirhysjhjyky6n2y378i4"; depends=[abind fs jpeg png rappdirs rlang torch zip]; }; tosca = derive2 { name="tosca"; version="0.3-1"; sha256="0rxf3hh2kn1hg70mabv1xljw9v4rf0zr7phyxrb69mbphcwgdbj4"; depends=[data_table htmltools lda lubridate quanteda RColorBrewer stringr tm WikipediR]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; - totalcensus = derive2 { name="totalcensus"; version="0.6.5"; sha256="1vddlx48fk4clw3hmax57nqwjccvaazv31nfr4kvrlmc3w4jxjpj"; depends=[data_table magrittr purrr stringr]; }; + tosr = derive2 { name="tosr"; version="0.1.0"; sha256="0ifqzddivb5xn1pm32hi0ys3lcb2ncv7ka8vl4pzmhq0yx05a7dg"; depends=[bibliometrix CINNA dplyr igraph magrittr rebus rlang stringr tibble tidyr]; }; + totalcensus = derive2 { name="totalcensus"; version="0.6.6"; sha256="09c7hm9yys48p8pjp9kv3szbwrg9xb1xf47zya24yir0gxs7bfmi"; depends=[data_table magrittr purrr stringr]; }; touch = derive2 { name="touch"; version="0.1-5"; sha256="0dan4mlvc5lg9v4zj9w6gk3c4cy64kaa984y495xpc1bzmv5c6jd"; depends=[Rcpp]; }; touchard = derive2 { name="touchard"; version="2.0.1"; sha256="06491r4x3ycmv3ddbqwig334wj9qvm395xlaifx4hjjyyi65xb3q"; depends=[MASS nleqslv numDeriv plotrix]; }; tourr = derive2 { name="tourr"; version="0.6.0"; sha256="0mci0y6s851gh1b157mhpvz0p7hkq2f1ccq9jj22p5k7ipxwn8dh"; depends=[dplyr MASS tibble]; }; toxEval = derive2 { name="toxEval"; version="1.2.0"; sha256="11rw8vjnz3kzikd59vbyiv8vc7dijpi6znyxlc7c4rpi41gs6c0m"; depends=[dplyr DT ggplot2 leaflet magrittr RColorBrewer readxl shiny shinyAce shinycssloaders shinydashboard tidyr]; }; toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; }; tpAUC = derive2 { name="tpAUC"; version="2.1.1"; sha256="0wix9qwcidj7xfqhh7bmrpnadd9qlkvg3515gaamdxkjbz2kyydc"; depends=[pROC]; }; - tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; }; - tpr = derive2 { name="tpr"; version="0.3-1.2"; sha256="0fnvzvis75gfkmxhyx6h3g4ps4rs07abk36r03108qwsmhcfk3y7"; depends=[lgtdl]; }; + tpn = derive2 { name="tpn"; version="1.0"; sha256="0ybz4v077g6vnksq79fgvji2d92wf88yd89bawza051h43y2xn3i"; depends=[pracma]; }; + tpr = derive2 { name="tpr"; version="0.3-2"; sha256="0v2s35yjislzaw924r1mk7jqzs0bxx6kyd3g1sc9rxlflvlbp15y"; depends=[lgtdl]; }; tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; }; - tracerer = derive2 { name="tracerer"; version="2.1"; sha256="0bmx3474chqs6pr4zq5gvjpwdvrs55s97jzkmga7yblz4blfg49g"; depends=[jsonlite Rcpp testit]; }; + tracerer = derive2 { name="tracerer"; version="2.2.2"; sha256="0932074lzkzprn8rr8f59ywhgn33fwvbnkxnxg97k29gapx49iyb"; depends=[jsonlite Rcpp testit]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; - trackdem = derive2 { name="trackdem"; version="0.5.2"; sha256="1kax2fr252rd0pqdf7ndgl8pb492fs1scn8xyasxxjdnlghdkk0d"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo shiny]; }; + track2KBA = derive2 { name="track2KBA"; version="1.0.1"; sha256="0bb3bfv5fz551vz78jqixjzlkzisszw2l6z8hv1n86j57r7y7mra"; depends=[adehabitatHR dplyr foreach geosphere ggplot2 lubridate magrittr maptools purrr raster rlang sf sp tidyr]; }; + trackdem = derive2 { name="trackdem"; version="0.6"; sha256="069nl1i73ayjnlsds4dnz6w4n765jijimgz20n9az7r0irvaddhi"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo shiny]; }; trackdf = derive2 { name="trackdf"; version="0.2.2"; sha256="110m7dmciyqbcb69sxi02h5djnf098wzfr84d6yppyc73a81989y"; depends=[data_table lubridate sp tibble]; }; + trackdown = derive2 { name="trackdown"; version="1.0.0"; sha256="1k54d055scxq73pfs9agmf32cihbyx1kdhqywxrda7xv79s8jml8"; depends=[cli googledrive rmarkdown]; }; trackeR = derive2 { name="trackeR"; version="1.5.2"; sha256="1f3giz6naxxyicgy9v0391ang43srwhy9zbiv4zmlc8i9v05b57i"; depends=[fda foreach ggmap ggplot2 ggridges gridExtra gtable jsonlite leaflet raster RSQLite scam sp xml2 zoo]; }; trackeRapp = derive2 { name="trackeRapp"; version="1.1"; sha256="0pys5vw3268j90i2gg6b1sgbx917vvk0x9k2ryh3l3p96vkrqv87"; depends=[changepoint colorspace DT foreach mapdeck mgcv plotly sf shiny shinydashboard shinyjs shinyWidgets trackeR V8 zoo]; }; - trackr = derive2 { name="trackr"; version="0.10.6"; sha256="0p7i4cj5z1qis2a1mqqz3wrgwhhbcggyyfwj3zycm3xcig9f6d9b"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; + trackr = derive2 { name="trackr"; version="0.10.7"; sha256="0h7ihymdvfvnnyxfxjwshslrxngh3i2ksqvhxynrp46m20mwjavd"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; trackter = derive2 { name="trackter"; version="0.1.1"; sha256="11rk53w0y9p0az6ydiq3vy50j1pj4p4cml5dqabrpcgfz4icjkrs"; depends=[data_table dplyr EBImage features ggplot2 jpeg Momocs pastecs plyr raster zoo]; }; tractor_base = derive2 { name="tractor.base"; version="3.3.3.1"; sha256="0w5jw7pf77npkgig7667yikpbwv4dfk1dcq63qm88l409ga2f95p"; depends=[ore reportr RNifti shades]; }; - trade = derive2 { name="trade"; version="0.5.5"; sha256="0brpvqj1zkic4ja6nbh2zxrlkmhj1ri4s04046pb9grycrxv93j1"; depends=[antitrust]; }; + trade = derive2 { name="trade"; version="0.8.0"; sha256="1ly8mb1gm40v72lwk29l3g55f2clrcmvn5vgfijfnc4nq37j1h0j"; depends=[antitrust]; }; + tradepolicy = derive2 { name="tradepolicy"; version="0.5.0"; sha256="1rjyx6mwqxgjprzll9908jgvl0q9dr8axjy6dp4fsxq2pvlnnz8m"; depends=[broom cli crayon dplyr ggplot2 lmtest magrittr msm purrr rstudioapi sandwich tibble tidyr]; }; trafo = derive2 { name="trafo"; version="1.0.1"; sha256="0gq3snjpkw0ncny7pkfi686qkgdhd8id73jxjk3chhqf5mzrrsbc"; depends=[FNN lmtest moments pryr]; }; trainR = derive2 { name="trainR"; version="0.0.1"; sha256="0wmxhw8yxkxpw08jma3r0zy7dhsrkbh5wjvd3izp5gf9dn9533cd"; depends=[dplyr glue lubridate magrittr purrr RCurl stringr tibble tidyr usethis xml2]; }; - traineR = derive2 { name="traineR"; version="1.6.1"; sha256="0s42xfn1mimd54cmy9m2mxswj71wp08ba1bsfbjj0732pr4ccay8"; depends=[ada adabag dplyr dummies e1071 ggplot2 glmnet glue kknn MASS neuralnet nnet randomForest ROCR rpart scales stringr xgboost]; }; + traineR = derive2 { name="traineR"; version="1.6.2"; sha256="1q6r7q6k0rsx21bxp2vp4rnrjnslngwbv55kmrlmzn4mw61xh33q"; depends=[ada adabag dplyr dummies e1071 ggplot2 glmnet glue kknn MASS neuralnet nnet randomForest ROCR rpart scales stringr xgboost]; }; traipse = derive2 { name="traipse"; version="0.2.0"; sha256="1g6xnk4iz4vakvv0qc6vqammr3jf0a2iisp4f439pcm9kwn64jcr"; depends=[geodist geosphere magrittr]; }; + traitdataform = derive2 { name="traitdataform"; version="0.6.7"; sha256="1p5m480k8da4k091jiryqry0zwg8kw3s1cvvpgqjmjkz3v11dxsd"; depends=[curl data_table getPass plyr RCurl reshape2 suppdata taxize units XML]; }; traits = derive2 { name="traits"; version="0.5.0"; sha256="04s2523wkbjqxpwllvcy7ikyfri5gldgnynjswsxdy0k945wacvz"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; trajectories = derive2 { name="trajectories"; version="0.2-3"; sha256="1k1fyjyng9mi3k5v6bpbv3vkqr7c9zjp4yiyynb3rjxqpn1fxx7k"; depends=[lattice sp spacetime zoo]; }; trajr = derive2 { name="trajr"; version="1.4.0"; sha256="092hx27b6d0vy1pvmga1z3b245aa9gn9aw3hszbhhkkic5zfpgbq"; depends=[plotrix signal]; }; - tram = derive2 { name="tram"; version="0.6-0"; sha256="0lpdylfxksc5nzinczqcagz7fvjsvnzng1dakfwhfxwcfmcdzig0"; depends=[basefun Formula Matrix mlt multcomp sandwich survival variables]; }; - tramME = derive2 { name="tramME"; version="0.1.1"; sha256="03birc3rfjf838wivzcmv6rlblyaa3wrdk9ascny8zyxdni3wzmp"; depends=[alabama basefun coneproj lme4 MASS Matrix mlt mvtnorm nlme numDeriv RcppEigen TMB tram variables]; }; - tramnet = derive2 { name="tramnet"; version="0.0-5"; sha256="13i15asyxyb48648l3rniys6kzc94nikj2k5z50lycb25r4vz5v9"; depends=[basefun CVXR lhs mlr mlrMBO mlt ParamHelpers sandwich smoof tram]; }; + tram = derive2 { name="tram"; version="0.6-1"; sha256="0vs4hr08r3fdf63532k8kqrwm2gpgx0m8a3n0mfhsffc5nbvdxri"; depends=[basefun Formula Matrix mlt multcomp sandwich survival variables]; }; + tramME = derive2 { name="tramME"; version="0.1.2"; sha256="1s6s5m1xkzjchmiwvcgdx7w68igm2dy3wc61v5gd8ihv4l26ccd7"; depends=[alabama basefun coneproj lme4 MASS Matrix mlt mvtnorm nlme numDeriv RcppEigen TMB tram variables]; }; + tramnet = derive2 { name="tramnet"; version="0.0-6"; sha256="034ij8ir5v31n22pig7v6qizmyhpar1mklifvcskg0ydmpy7qkj4"; depends=[basefun CVXR lhs mlr mlrMBO mlt ParamHelpers sandwich smoof tram]; }; tranSurv = derive2 { name="tranSurv"; version="1.2.2"; sha256="17rvzjcn76z5niw1jappiadbkf66a9x0m7p3251lgb7qrnvpx3gk"; depends=[rootSolve SQUAREM survival truncSP]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; + transfR = derive2 { name="transfR"; version="0.1.0"; sha256="0c84wnqc60hsl8j3dbz28dknvz9qfdy1rb03cykvra82wv446aqi"; depends=[doParallel foreach Rdpack sf stars units]; }; transformmos = derive2 { name="transformmos"; version="0.1.0"; sha256="1hsp399cj6cnsysb4hm4ra075qm2fxkjhyq16m3nai51fvzkak0p"; depends=[]; }; transformr = derive2 { name="transformr"; version="0.1.3"; sha256="1dn6h8i7vli2zv4408djyg74j9fv9sjrqf75hx9dh7qnj352wf69"; depends=[lpSolve Rcpp rlang sf tweenr]; }; translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; @@ -16719,11 +17406,12 @@ in with self; { transx = derive2 { name="transx"; version="0.0.1"; sha256="1xx934w4fhk2nwm5h6lf4irj83wsfp8lbplzcha5rnc7aka8pn3v"; depends=[rlang]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; trawl = derive2 { name="trawl"; version="0.2.2"; sha256="1a8cvkmw7bmdljggfv26n2nrad6974spga2yw5386k70ghq56mz3"; depends=[DEoptim ggplot2 ggpubr MASS rootSolve Runuran squash TSA]; }; - treasuryTR = derive2 { name="treasuryTR"; version="0.1.2"; sha256="0v8rbiw68hl23bn44ax7y0i661afvbhssadvaximf1ncwsv479dz"; depends=[dplyr lubridate quantmod xts zoo]; }; - tree = derive2 { name="tree"; version="1.0-40"; sha256="1rr6ws62j9h36f3nl713f8h3ndkh95mv46l055jvgmby5lw1dazz"; depends=[]; }; + treasuryTR = derive2 { name="treasuryTR"; version="0.1.5"; sha256="0qlxkvsbi1xfsahpdzbcnzylisyy1lb94dkk5jjzis419lrgcssr"; depends=[dplyr lubridate quantmod xts zoo]; }; + tree = derive2 { name="tree"; version="1.0-41"; sha256="13jwdxx3na16mly176n01zdkaqn4a8x9fc43rq5xx5vx31drkkr1"; depends=[]; }; tree_interpreter = derive2 { name="tree.interpreter"; version="0.1.1"; sha256="18p1x53q1hhhagglgsq2axnr9l5rpa08vxjayqqmb6rsjrkygn78"; depends=[Rcpp RcppArmadillo]; }; treeClust = derive2 { name="treeClust"; version="1.1-7"; sha256="1s7kh6q0bkixsygrip95zf1bi10ihddsa5lq9dfxd68yh8rsby6z"; depends=[cluster rpart]; }; - treeDA = derive2 { name="treeDA"; version="0.0.4"; sha256="0zhzb21lvxk278ysl275g39y2r8dlgqdix5rfg2pwv3nzj2531rc"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; + treeDA = derive2 { name="treeDA"; version="0.0.5"; sha256="0rdqvjj16w7ykpxd6m800h4zv79y9c1phhkl14xy10gbi2cqh10g"; depends=[ape ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; + treebalance = derive2 { name="treebalance"; version="1.0.0"; sha256="1k7mqrq94w3vf03wbr17cpmaflzf9rmp5pisjccswd251y5a0bm9"; depends=[ape memoise]; }; treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; treeclim = derive2 { name="treeclim"; version="2.0.5.1"; sha256="1gwsprvr9yi67slrkxf34kbqvqkr4csaqkcdbdi1vwivn2nyb3py"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; @@ -16733,7 +17421,7 @@ in with self; { treeheatr = derive2 { name="treeheatr"; version="0.2.1"; sha256="0618j5rlq0xik9vl2l8ircnh98wzdzf9bxnfgmiqrpywgmc8r5nk"; depends=[cluster dplyr ggnewscale ggparty ggplot2 gtable partykit seriation tidyr yardstick]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; treeman = derive2 { name="treeman"; version="1.1.4"; sha256="1rlq8sklvpj6an8x9wvs3501y6dpl2vhl5zfmz0yvmif04msf49v"; depends=[ape bigmemory plyr RJSONIO stringr]; }; - treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; + treemap = derive2 { name="treemap"; version="2.4-3"; sha256="1fg8gygw38x7msn32barx2irvcv8flm6wqvipnbj1qkh9w89y3q4"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; treemapify = derive2 { name="treemapify"; version="2.5.5"; sha256="0g6bwchyn13iksv8vyc4d0c7n1zpy26x1bd6vkrm8ail98y2ia2m"; depends=[ggfittext ggplot2]; }; treenomial = derive2 { name="treenomial"; version="1.1.3"; sha256="1cw17dnayh5pgcgh5wghskq3i0zc7ww8kb8flyqyqrb4za2w47b6"; depends=[ape Rcpp RcppArmadillo RcppThread]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; @@ -16742,8 +17430,8 @@ in with self; { treestartr = derive2 { name="treestartr"; version="0.1.0"; sha256="05rxy9lmb77ng4266871sd881mlp4rd5qalvsd7ps2x2j4plaqf4"; depends=[ape phytools]; }; treestructure = derive2 { name="treestructure"; version="0.1.0"; sha256="0514q53bdwv9fwd58srhr6lzw1j56fcd64hml8w4rv4wzcd6c01m"; depends=[ape Rcpp]; }; treetop = derive2 { name="treetop"; version="0.0.1"; sha256="06ca5zn60d925r775v39cdlpiwh0g9hv6a01hh1v6s2hs0176ivr"; depends=[geometry lidR maptools pryr raster rasterVis RColorBrewer rgdal rgl rglwidget sf shiny sp spatstat_core spatstat_geom stars]; }; - trekcolors = derive2 { name="trekcolors"; version="0.1.2"; sha256="0rya2g27afjvi44w0si96cj0x4p5hc0ydqvjwigk4rwa1vc2ax2q"; depends=[ggplot2]; }; - trekfont = derive2 { name="trekfont"; version="0.9.4"; sha256="09r8hjh7xjagfp3cxjai0079gan5h0zxjgpcvs4cx83icj76axgh"; depends=[]; }; + trekcolors = derive2 { name="trekcolors"; version="0.1.3"; sha256="0jm85lrsqlpl1k62fbim48kprsqs50bm0dbajnk8f42x6i3m1xav"; depends=[ggplot2]; }; + trekfont = derive2 { name="trekfont"; version="0.9.5"; sha256="1c0rwjmpg6b83kvkwrc0fcg1adx5is1g0wn01iss037jph5j0f2l"; depends=[]; }; trelliscopejs = derive2 { name="trelliscopejs"; version="0.2.6"; sha256="16i1km57yz8bl4ni919d3qmj8aj5l88l7byhd6ksh88ygpfl7wq8"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; trelloR = derive2 { name="trelloR"; version="0.7.1"; sha256="0rlnqpkvfp736m2ndz90v9rl4x17l3i8j70bsx7pfdd0nfffqsqv"; depends=[httr jsonlite]; }; trend = derive2 { name="trend"; version="1.1.4"; sha256="1mr5g5gaxiqj6x83ngcbwwh57vhrhcz0x9dh0rmvs9y2ivk29ccs"; depends=[extraDistr]; }; @@ -16755,17 +17443,18 @@ in with self; { trialr = derive2 { name="trialr"; version="0.1.5"; sha256="11b5wmyq4ki2n0cr2hp2lf219i8q5yh6biyyl8wnvajiaa8560ja"; depends=[BH binom coda dplyr ggplot2 gtools magrittr MASS purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders stringr tibble tidybayes]; }; triangle = derive2 { name="triangle"; version="0.12"; sha256="1cv3l97myhkyl0c4xjympqghlk0av8xfk00av8kj93ndgkv5bfj7"; depends=[]; }; triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; }; - triangulr = derive2 { name="triangulr"; version="1.1.0"; sha256="0n3kccn5ki0cprrj581i5fpzpa45dw6lwp86kkhvqnhpdwk6h9mv"; depends=[dqrng Rcpp rlang vctrs]; }; + triangulr = derive2 { name="triangulr"; version="1.2.1"; sha256="1fjibp1rhgj363z3gn2iia5iv1hahdabwpxd7q3lxqzxwzs4nfd5"; depends=[cpp11 rlang vctrs]; }; tribe = derive2 { name="tribe"; version="0.1.8"; sha256="01z1b9k3j4xi5fp9pkpr991yr7x8vk8vysipy7iwdmdr7xg4w4p0"; depends=[dplyr lazyeval magrittr rlang rstudioapi]; }; tricolore = derive2 { name="tricolore"; version="1.2.2"; sha256="0pxahddc3dah4n4xk4i0dkiwvh4wf03gcx8q3nfrsk07zzap1zh1"; depends=[assertthat ggplot2 ggtern shiny]; }; triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; + triggerstrategy = derive2 { name="triggerstrategy"; version="1.1.0"; sha256="1gly2brw0glcnx8is4mrlrbxgnma57vpfid5lkpz2wdakwn7y2by"; depends=[GA gsrsb ldbounds mvtnorm nleqslv]; }; trigpoints = derive2 { name="trigpoints"; version="1.0.0"; sha256="1hckjh2gb0fvd2c8x6mj0idpk3im7b831y7mbli1hqhry6qqdw15"; depends=[sf tibble]; }; trimTrees = derive2 { name="trimTrees"; version="1.2"; sha256="0v75xf5186dy76332x4w7vdwcz7zpqga8mxrb5all2miq2v45fi8"; depends=[mlbench randomForest]; }; trimcluster = derive2 { name="trimcluster"; version="0.1-5"; sha256="12siv8yx8dcavsz8jk96lwscbj257ar8jpaxksl2zb06987g4fcj"; depends=[]; }; trimetStops = derive2 { name="trimetStops"; version="0.1.0"; sha256="068mya6zqiacs3nznwmz17srn90ar6wjnpkgqsznzmigzy7c4idk"; depends=[]; }; trimmer = derive2 { name="trimmer"; version="0.8.1"; sha256="0hn5pignj5clg7wb3xd0mh9jqc480wqxxymzaas68lxzi6p5mng9"; depends=[cli crayon data_table pryr]; }; trimr = derive2 { name="trimr"; version="1.0.1"; sha256="0gcn18nwxmax9c35is0nldyh74cw8rg3gj60cixzs9qjnpb9xx3d"; depends=[]; }; - trinROC = derive2 { name="trinROC"; version="0.5"; sha256="1jbnr8w14r2n6wvffv9bbhnhi7ipcjfzcgawp8rr2scss8hxy4zc"; depends=[ggplot2 gridExtra rgl]; }; + trinROC = derive2 { name="trinROC"; version="0.5.1"; sha256="1mx7m50afwjr55svpf4ckk9rfc1qkk4h8n08ghghfaa6vc2ysz1y"; depends=[ggplot2 gridExtra rgl]; }; trioGxE = derive2 { name="trioGxE"; version="0.1-1"; sha256="1ra86l3i7fhb6nsy8izixyvm6z23shv7fcjmnnpil54995j15ax4"; depends=[gtools mgcv msm]; }; trip = derive2 { name="trip"; version="1.8.5"; sha256="160dp9ji8j4w2fwh62l6cp485iy5n5is451rbgf28d5q0prd912c"; depends=[crsmeta dplyr geodist glue MASS raster reproj rlang sp spatstat_core spatstat_geom traipse viridis]; }; tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; @@ -16773,33 +17462,35 @@ in with self; { triplot = derive2 { name="triplot"; version="1.3.0"; sha256="1apmdpxdnnmjyi7gcrjrqw44iqphr84nbgw0nfxcspzjgxhc81l1"; depends=[DALEX ggdendro ggplot2 glmnet patchwork]; }; tripsAndDipR = derive2 { name="tripsAndDipR"; version="0.1.0"; sha256="1gm96fxgql9y08w177nyxw0bahyafcs75maz743a9hfb0gjixvy2"; depends=[]; }; triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; }; - troopdata = derive2 { name="troopdata"; version="0.1.3"; sha256="1j8adfckz0jlsdcg1wq508b2ipvdf8aij8hsaxq82qnxja0mgrr4"; depends=[countrycode dplyr haven magrittr readstata13 rlang stringr tibble tidyr]; }; + troopdata = derive2 { name="troopdata"; version="0.1.4"; sha256="1sd7f1rm6i6z4kb1414gwkslg3p6yzns5xjap3kk5xi5ckqlbxsa"; depends=[dplyr magrittr rlang tibble]; }; tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; }; tropicalSparse = derive2 { name="tropicalSparse"; version="0.1.0"; sha256="1ay6i3pzz5lpvznxqln31mijp86p6z0df7rvp0gm4lxvn294m7f8"; depends=[]; }; trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; }; - trtf = derive2 { name="trtf"; version="0.3-7"; sha256="11fq119x59adls2r0af2p19zwbk5ykn5brdzqbqxy8ngmpncmzxr"; depends=[Formula libcoin mlt partykit sandwich variables]; }; + trtf = derive2 { name="trtf"; version="0.3-8"; sha256="0zczfp2yznc11s2bf2k4lhggkmlsi5lyrkhxywp6jm9ygzq14wd9"; depends=[Formula libcoin mlt partykit sandwich variables]; }; truelies = derive2 { name="truelies"; version="0.2.0"; sha256="1qxzw7x7xgp9x6klnq6jv0fl8al2l24br2sd59r5gq076gkqc47k"; depends=[hdrcde]; }; trueskill = derive2 { name="trueskill"; version="0.1"; sha256="0mqvm64fcsxjlh789lqdk6l28q31yhh6jjirwjlgbpxxb90c5107"; depends=[]; }; + truh = derive2 { name="truh"; version="1.0.0"; sha256="0acsyzm6rpmzyq8pg33c631hi4xir49gqxbpshcrr6i2v3q6k14j"; depends=[cluster doParallel foreach fpc iterators Rfast]; }; truncSP = derive2 { name="truncSP"; version="1.2.2"; sha256="1hdi518j3sg9273g01l1jqlmqya3ppim82ma7zakwqpmsjmzw18q"; depends=[boot truncreg]; }; truncdist = derive2 { name="truncdist"; version="1.0-2"; sha256="02ihw4ixhadwr3sqm6r264i8vpcaz8pn69vkzabd8fwqvn5vcj5q"; depends=[evd]; }; truncgof = derive2 { name="truncgof"; version="0.6-0"; sha256="0b499i9zjwvva5jfl9fj02jjrgy8myxqfjwa0cjg0jrpgxczgwg8"; depends=[MASS]; }; truncnorm = derive2 { name="truncnorm"; version="1.0-8"; sha256="0zn88wdd58223kibk085rhsikl4yhlrwiyq109hzjg06hy6lwmj9"; depends=[]; }; truncreg = derive2 { name="truncreg"; version="0.2-5"; sha256="1scbjh5k1b8cjjavax08grlxdfs75s63dss0ifpz4d0axc4nm3iy"; depends=[maxLik]; }; trust = derive2 { name="trust"; version="0.1-8"; sha256="1b6wsx4vybr5952ii3ska6jbcb3654iibz83n645khxfca5k8blm"; depends=[]; }; - trustOptim = derive2 { name="trustOptim"; version="0.8.6.2"; sha256="1nsl8jd6cna52b5dd92jw3sh84jqpg7gazskn7166bcjbph19bf7"; depends=[Matrix Rcpp RcppEigen]; }; + trustOptim = derive2 { name="trustOptim"; version="0.8.7.1"; sha256="0wn0sbxv5p77f8xh2azn6msjxssgfl9ynip1rygc4ija884l78xh"; depends=[Matrix Rcpp RcppEigen]; }; trustedtimestamping = derive2 { name="trustedtimestamping"; version="0.2.6"; sha256="1rx7ypy331mq5ni5hxhqcfnicvwdgg9j2pm3aj097a5hhigibdrq"; depends=[digest httr jsonlite]; }; - truthiness = derive2 { name="truthiness"; version="1.2.4"; sha256="1g7nf45whb523n544q48pg5di7i62r0h1mfa3dp16bciwa2y998h"; depends=[dplyr DT emmeans ez forcats ggplot2 lme4 magrittr MASS ordinal purrr Rdpack readr rmarkdown tibble tidyr]; }; - tryCatchLog = derive2 { name="tryCatchLog"; version="1.2.1"; sha256="13c8llyg48ll8hz4v6pfbng3ilipj86q20blwbvn0b0h3apb3v7p"; depends=[]; }; + truthiness = derive2 { name="truthiness"; version="1.2.5"; sha256="0cssqlrilx2lglr2f53yysqgf604g4y326ijf8avlg6v5l6hlcr1"; depends=[dplyr DT emmeans ez forcats ggplot2 lme4 magrittr MASS ordinal purrr Rdpack readr rmarkdown tibble tidyr]; }; + tryCatchLog = derive2 { name="tryCatchLog"; version="1.2.4"; sha256="163mjif6819s53wn818siymmzc7n0xyd031s9c5n5irgs3dicfqj"; depends=[]; }; ts_extend = derive2 { name="ts.extend"; version="0.1.1"; sha256="03b358nywx0zynb6006886mzvz1mbbaim6b5m641drklh6k0l6r1"; depends=[]; }; - tsBSS = derive2 { name="tsBSS"; version="0.5.7"; sha256="1lcvfd94vgfjbmagxh82rz8yc7468mm3vh99jmjg7jagvrb4iwib"; depends=[boot BSSprep forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; + tsBSS = derive2 { name="tsBSS"; version="1.0.0"; sha256="04nsbifc6zkilqifj6iwc0vf2z84y8wcbf8pndgkzi039kk6c385"; depends=[boot BSSprep forecast ICtest JADE Rcpp RcppArmadillo xts zoo]; }; tsDyn = derive2 { name="tsDyn"; version="10-1.2"; sha256="0wwp18qaxljdy1zqww1qw9fa9ycvgwcf6j52cpx3v2f2177x7snc"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.3"; sha256="00p7275iq8qn6c6dpqjr5s9fzc0a6njqqi9gvqnh5s9lfx9mbk1v"; depends=[KFAS]; }; tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-4"; sha256="07ymkrik1vwblcj5i0crihbrrxkrn8xjkap3lrzxy4vidgqalw3f"; depends=[]; }; tsapp = derive2 { name="tsapp"; version="1.0.3"; sha256="1k2r8nnqbkgrhgdqg45y0svzqj521wl6vbss23yypwh1gcbddzn9"; depends=[fftwtools Matrix vars]; }; - tsbox = derive2 { name="tsbox"; version="0.2.1"; sha256="0k5azdn4af6mwcx1lf8ns83nim34kfsb9m26h3yjm9mk9qixr6k1"; depends=[anytime data_table]; }; + tsbox = derive2 { name="tsbox"; version="0.3.1"; sha256="0vm6w6y9j2xgzappqjv6p40nl0lrbx3jzqjya9ahhapaklhb1hx3"; depends=[anytime data_table]; }; tsc = derive2 { name="tsc"; version="1.0-3"; sha256="1acsdkxizlkix1sskwqv2a80rshw6f14zvcsjhrmmdfd4bmwh36y"; depends=[]; }; + tscopula = derive2 { name="tscopula"; version="0.2.1"; sha256="01zxwncr5azprcqm801qsa3v0c5hffycm4rxkqbxkaz11wvijhj3"; depends=[arfima FitAR FKF ltsa Matrix rvinecopulib xts zoo]; }; tscount = derive2 { name="tscount"; version="1.4.3"; sha256="087ncxy1q91yc5rr15d5h6m7kaqhw8yy5fbm22rkzp9dg2fhbzi3"; depends=[ltsa]; }; tsdb = derive2 { name="tsdb"; version="1.0-0"; sha256="1vlvigcvg4zpw7kl42kzbcllamlqvblw7ipfhvq04an4rq924pvf"; depends=[datetimeutils fastmatch zoo]; }; tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; @@ -16812,6 +17503,7 @@ in with self; { tsfeatures = derive2 { name="tsfeatures"; version="1.0.2"; sha256="1zi7p7gdd9bg6rpdin88rq9qi43cpk663xmvffa7d5p1w45831kd"; depends=[forecast fracdiff furrr future purrr RcppRoll tibble tseries urca]; }; tsfgrnn = derive2 { name="tsfgrnn"; version="1.0.1"; sha256="1r9n5ggsc6d508ba4ggqfq6d6mhakkvisyczypv2wb17qdkl86g9"; depends=[ggplot2 Rcpp]; }; tsfknn = derive2 { name="tsfknn"; version="0.5.0"; sha256="0rl3g0qs787cy67vq25aygb9mxhd63p66a1i4p2zi906cx4xj4b3"; depends=[ggplot2 Rcpp]; }; + tsfngm = derive2 { name="tsfngm"; version="0.1.0"; sha256="1wx1imbvnc2bjvfal45zhgpz296fiydqffb0rk428xpjgp2dj6p7"; depends=[]; }; tsgui = derive2 { name="tsgui"; version="0.2.1"; sha256="0crm2ripxpjaz1cqz9lkj3y9xj4ia0hlq4lvz1rff0wq6d5w79dn"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.4.3"; sha256="0xzcfdad1z8336wnsrk9sy21psd898wwkdkndq7dshqwp2rj2kxl"; depends=[ggplot2 kernlab reshape2]; }; tsibble = derive2 { name="tsibble"; version="1.0.1"; sha256="07c412jkybv3bw056f6xd7f5f7231qgynck31r396dqnq6aydbgp"; depends=[anytime dplyr ellipsis generics lifecycle lubridate rlang tibble tidyselect vctrs]; }; @@ -16825,52 +17517,53 @@ in with self; { tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; tsriadditive = derive2 { name="tsriadditive"; version="1.0.0"; sha256="1zk97vz5ag6j0r8w3b5kgl2cx628jmdy73spmwmsw7x5yc24901d"; depends=[survival]; }; - tsrobprep = derive2 { name="tsrobprep"; version="0.1.0"; sha256="17a4igrvwbgdxa5nmk362mbpnbs1c9yw54bddp17q5ngmnnjwgss"; depends=[MASS Matrix mclust quantreg]; }; + tsrobprep = derive2 { name="tsrobprep"; version="0.3.1"; sha256="1j4y4zslfrrnzimr87fl9am4n8g4b29sqkf608rrqywa08pahsq7"; depends=[glmnet MASS Matrix mclust quantreg textTinyR zoo]; }; + tssim = derive2 { name="tssim"; version="0.1.7"; sha256="154snb0npy8zbkspp475nv9rvv1ls6rbgxz3jr152j79vsiis3ng"; depends=[dsa timeDate tsbox xts zoo]; }; tsutils = derive2 { name="tsutils"; version="0.9.2"; sha256="0gp8f0a9dn3h4lv38xiw04j832igwhfralzc5vd74r952x7b6hbx"; depends=[forecast MAPA plotrix RColorBrewer]; }; tsviz = derive2 { name="tsviz"; version="0.1.0"; sha256="099ga750kr9hrkd8vaxhz6h4gha6zfr9jzqwrmgms2h2h1a7jxr7"; depends=[dplyr forecast ggplot2 lubridate magrittr miniUI plotly shiny shinyhelper]; }; tsvr = derive2 { name="tsvr"; version="1.0.2"; sha256="1h8yjnw7f8w6m19jh3a518vkzjcmbhl3lk15d1jyhy8p4ajzzjdx"; depends=[]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; tsxtreme = derive2 { name="tsxtreme"; version="0.3.3"; sha256="1725rkdq377z3c06hc2g9l0dwgfy5gz3pgygpz1pyy83s5c7j869"; depends=[evd MASS mvtnorm tictoc]; }; ttScreening = derive2 { name="ttScreening"; version="1.6"; sha256="1i8c9l3sdkzl99zxxyfqm84vkh6wjdh3a32l5q8ikf74g9dhxkf4"; depends=[corpcor limma MASS matrixStats simsalapar sva]; }; - ttTensor = derive2 { name="ttTensor"; version="0.99.2"; sha256="1qhpsaa0m8g61mhdffnrpfsc66iwm240na2wsa3cnmydk1mqjlxd"; depends=[Matrix PTAk rTensor tensorr]; }; + ttTensor = derive2 { name="ttTensor"; version="1.0.1"; sha256="0ryfxx4chnc10cl5h5cb4hnvzf2cm64k8m36l4qbjz4f1vkw0a36"; depends=[Matrix PTAk rTensor tensorr]; }; ttbary = derive2 { name="ttbary"; version="0.2-0"; sha256="1231ssndf0a0b1g8sz8w5ckw7410c5qmflnsxmizc4v8iiscdibc"; depends=[Rcpp spatstat spatstat_core spatstat_geom spatstat_linnet]; }; ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; - ttdo = derive2 { name="ttdo"; version="0.0.6"; sha256="1p7anl980nl5wxgymw24apwg48wh6c2mzl0h1zifrarpj8a9v0k2"; depends=[diffobj tinytest]; }; - ttestshiny = derive2 { name="ttestshiny"; version="0.1.0"; sha256="186569p9h3597z9lxyzm7fj8k6bzgm2kw757dcv2qhhf2k7nfch9"; depends=[dplyr shiny shinyAce shinyjs]; }; + ttdo = derive2 { name="ttdo"; version="0.0.8"; sha256="184rfmrd4y63j8i62w8cy7d6cqgvlhj8h6zgjzsvad9l6pq2hmb3"; depends=[diffobj tinytest]; }; tth = derive2 { name="tth"; version="4.12-0"; sha256="0bwn8xxswkilv0gagh54fiw90pvjzpz6w6ky4prc3mm070plqf4b"; depends=[]; }; + ttt = derive2 { name="ttt"; version="1.0"; sha256="12bjhp78162v5y64qxfccaqxgwdqhmd3iwjda6pi7j6zqmy9p0gm"; depends=[Formula htmltools knitr]; }; tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; ttutils = derive2 { name="ttutils"; version="1.0-1"; sha256="18mk30070mcplybg320vjbk9v5flxnbqi5gx0yyr1z6ymjmnrxbc"; depends=[]; }; ttwa = derive2 { name="ttwa"; version="0.8.5.1"; sha256="1lhypcwssq0dspizvln3w4dg16ad6mz8cj4w34c5vsrayqid7fyn"; depends=[data_table]; }; tuber = derive2 { name="tuber"; version="0.9.9"; sha256="1nnjwn3c0rr90jvkwlh9xs5vc2nl6qzjj958hbddfrkny0w88mnp"; depends=[dplyr httr jsonlite plyr purrr]; }; tubern = derive2 { name="tubern"; version="0.1.0"; sha256="0wpn4aig6r1kpncrgrqra4kr0f07rdq7z4p2k0h28f7kww6l52vv"; depends=[httr jsonlite]; }; tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.1"; sha256="0lrylh0np0kbl4xx3gmlvid0g11fh0ad39wdwbz6hrmf5pzsjdjq"; depends=[]; }; - tufte = derive2 { name="tufte"; version="0.9"; sha256="0kylvxbw3wbb5p7f09wav20l8gxbpvkcd3k70dimnqhrfbzw05qd"; depends=[htmltools knitr rmarkdown xfun]; }; + tufte = derive2 { name="tufte"; version="0.10"; sha256="0j3xkxb0f559nmvm8f39s6jlv2p78xms2g5lfwij1jhicn9dshgd"; depends=[htmltools knitr rmarkdown xfun]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; tukeyGH = derive2 { name="tukeyGH"; version="1.0.0"; sha256="1nlhv8lyjaqq95l7j85bdqdrsphagwf69iq8g3ryyyckchirljjg"; depends=[magrittr minqa Rdpack rootSolve]; }; tukeytrend = derive2 { name="tukeytrend"; version="0.7"; sha256="15j7g0drb92rpxq7d0jl9h0hxpi9pbgpvfcxaicrcgypxap3721q"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; tumblR = derive2 { name="tumblR"; version="1.2"; sha256="1qili2c9wb6hpjjf7m0gyvdymzls5w4pghjkyi3sbp0q7ayhbh12"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; - tune = derive2 { name="tune"; version="0.1.5"; sha256="06snvnppa9xan99lkd2b7ynh916j75ga9lvifnra614akhhxv4rr"; depends=[cli dials dplyr foreach generics ggplot2 glue GPfit parsnip purrr recipes rlang rsample tibble tidyr vctrs workflows yardstick]; }; - tuneR = derive2 { name="tuneR"; version="1.3.3"; sha256="0av978m4h2iqazyfq6n2cgkh4wpllihh7s29lah2nb8ngc0w5hxx"; depends=[signal]; }; + tune = derive2 { name="tune"; version="0.1.6"; sha256="1356w98ljiay8fwa7narr7j5hfbvi69gy03gr7kqiwnfglyksrza"; depends=[cli dials dplyr foreach generics ggplot2 glue GPfit hardhat lifecycle parsnip purrr recipes rlang rsample tibble tidyr vctrs withr workflows yardstick]; }; + tuneR = derive2 { name="tuneR"; version="1.3.3.1"; sha256="12nixpqrc5gp7p2clr7ia6jwb0jq2i3brlxiwlp00ixmnm5g1jyd"; depends=[signal]; }; tuneRanger = derive2 { name="tuneRanger"; version="0.5"; sha256="1xf78q8f7sq6w2jjwcw8vz88bmbp8yivydmqygjag58abnhd0356"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; - turboEM = derive2 { name="turboEM"; version="2020.1"; sha256="0z367lmq17al1swq4lrn8hs45xz0fxyls6i0r820f4caxmrii5pm"; depends=[doParallel foreach iterators numDeriv quantreg]; }; + turboEM = derive2 { name="turboEM"; version="2021.1"; sha256="17j308qla2680k0j8cf2c4v1jlsm21z93zglncmw3n0isa7cwjly"; depends=[doParallel foreach iterators numDeriv quantreg]; }; turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; }; turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; }; tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; - tuts = derive2 { name="tuts"; version="0.1.1"; sha256="0mwc6lsnhxww041wh3020wz7w812asp1d6djv4n9pl7jil0kvkry"; depends=[coda doParallel foreach lomb mcmcplots rjags truncnorm]; }; - tvR = derive2 { name="tvR"; version="0.3.1"; sha256="056a241m3c1jhf8idly1bm4xja349cg5yzz19l45zyggml82snin"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; - tvReg = derive2 { name="tvReg"; version="0.5.4"; sha256="0v5w69b79byj9c450qas1lpvvzc513ggvniqp4y29pyb362a6hw0"; depends=[bvarsv MASS Matrix plm systemfit vars]; }; + tvR = derive2 { name="tvR"; version="0.3.2"; sha256="1i20z09f714fyn3ipcn9i5g4dx7cyjfkyjqzyqzqapkg0m9ny91m"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; + tvReg = derive2 { name="tvReg"; version="0.5.6"; sha256="04fxpkbq76lz5l1q83yr306d8lcjxh3c1wlpqzhvx8iqn0w6qbhx"; depends=[bvarsv MASS Matrix plm systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; - tvem = derive2 { name="tvem"; version="1.2-0"; sha256="1sw8ks6rpvpmr5b6shbwaclwn2j1xfbwg6zdlyjsy68752mz2ji3"; depends=[mgcv]; }; - tvgarch = derive2 { name="tvgarch"; version="2.0"; sha256="0ph231w39dhzliwsz34y38c62jqqj68gcm2qzcz2yawsx59ml4g1"; depends=[garchx hier_part matrixStats numDeriv zoo]; }; + tvem = derive2 { name="tvem"; version="1.3"; sha256="1ij628maz4l2n7az7b2lpphld50gbh8r20jz04cl2gcdbl6hli54"; depends=[mgcv]; }; + tvgarch = derive2 { name="tvgarch"; version="2.1"; sha256="1dhf892li7d0jqs49b7f7ljzy1mrzhgjypsyj7llzg7v1zlsabn3"; depends=[garchx hier_part numDeriv zoo]; }; tvgeom = derive2 { name="tvgeom"; version="1.0.1"; sha256="1lr2vqgj5jfhzavwd43wcchhbicmf4dqjvyf66rvnjkw3jaig8dm"; depends=[]; }; tvm = derive2 { name="tvm"; version="0.5.0"; sha256="1disznln4xgkr9q6sj978nadbwg43xv28fq3r3zyy6icg4x9h6gs"; depends=[ggplot2 reshape2 scales]; }; tvmediation = derive2 { name="tvmediation"; version="1.0.0"; sha256="16djg3ibn1i68lzwby8242qa90347iq1i9ha4nyzacaf7mjd4ysl"; depends=[dplyr ggplot2 kedd locpol]; }; tvthemes = derive2 { name="tvthemes"; version="1.1.1"; sha256="0j24hhpjab1220bmspd6a0pa2295gpyyrcxs1rxjnsr5vgn90fcq"; depends=[extrafont ggplot2 glue magick scales]; }; - twang = derive2 { name="twang"; version="2.0"; sha256="1lwb0kazskdn9id3n6jgww28arj74lwsf8csm4k86wsb4mdqdlf9"; depends=[data_table gbm ggplot2 lattice latticeExtra MatrixModels survey xgboost xtable]; }; + twang = derive2 { name="twang"; version="2.4"; sha256="1d6ql65yymy02jq8xqkkfr5xc72scc2pm87346l9gzqc1sqfi523"; depends=[data_table gbm ggplot2 lattice latticeExtra MatrixModels survey xgboost xtable]; }; twangContinuous = derive2 { name="twangContinuous"; version="1.0.0"; sha256="0bn1i9nid97irn820591ml3556bbmg6pw2qhm9k9vqgnqmnhcfnq"; depends=[gbm lattice Rcpp survey xtable]; }; - twangRDC = derive2 { name="twangRDC"; version="0.1"; sha256="16c2xfcx0n27b0yzffn5qn7ag8lkckiqz8kzf83isaqnsji6yd0n"; depends=[data_table ggplot2 MatrixModels xgboost]; }; + twangMediation = derive2 { name="twangMediation"; version="1.0"; sha256="0fkj94r6ca59kziknv8pgr4lklxyylfabvhkc3swbmg3cqix3jda"; depends=[gbm gridExtra lattice latticeExtra survey twang]; }; + twangRDC = derive2 { name="twangRDC"; version="1.0"; sha256="03z2c18nq6iwwb3si7wjc56npdyray3xsy6k6ifvbalib2ibv2f1"; depends=[data_table ggplot2 MatrixModels xgboost]; }; tweedie = derive2 { name="tweedie"; version="2.3.3"; sha256="1nfhaqblvm62j8gfkyrgba5ai0pb2fsnrxp63637mhys2bawlcm0"; depends=[]; }; tweenr = derive2 { name="tweenr"; version="1.0.2"; sha256="17znizh4yabh2zs9mzyr0sl6p0pw49961i61br7cl1b7v9sza18q"; depends=[farver magrittr Rcpp rlang]; }; twenty48 = derive2 { name="twenty48"; version="0.2.0"; sha256="1bhwjk6qx63jkx0vxizbxi6z8mqpljdv2f259cmf7jsrv2mr0kdy"; depends=[crayon R6 rstudioapi]; }; @@ -16885,49 +17578,56 @@ in with self; { twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; twoway = derive2 { name="twoway"; version="0.6.3"; sha256="02z2syb0g92d97gjxfkarpil9b2n25s128606h071jl0s88cr4ar"; depends=[]; }; twowaytests = derive2 { name="twowaytests"; version="1.1"; sha256="00wz8l4ginv1pp1dbjwqbmn4q8i8fnmhz8x3v6riffndw5ag22f2"; depends=[car ggplot2 nortest onewaytests]; }; + twoxtwo = derive2 { name="twoxtwo"; version="0.1.0"; sha256="03wrxzjv21df5c8w9bixfw42m82yf9grv1c4nlw5dy09lsfhl8sv"; depends=[dplyr forcats knitr magrittr rlang tidyr]; }; txshift = derive2 { name="txshift"; version="0.3.5"; sha256="1xb1dcp2jsnh1qn7by36kjjh94q9mr197nzxpnl5m6ql9kspgjz5"; depends=[assertthat cli data_table ggplot2 hal9001 haldensify latex2exp lspline mvtnorm Rdpack scales stringr tibble]; }; txtplot = derive2 { name="txtplot"; version="1.0-4"; sha256="00sriml48y70j18jz235dsfm5x3a81bnzskfp3hnv6cbjwwsmca4"; depends=[]; }; txtq = derive2 { name="txtq"; version="0.2.4"; sha256="1fvjprcwfqbw9c4sqcxv8r0jgvqmkip6d86r3cgrhwyic1ndk1l5"; depends=[base64url filelock R6]; }; typed = derive2 { name="typed"; version="0.0.1"; sha256="096rzsxjdycf55jx33cxk1284rzb2vcxvp298y4q6v9x0w36php3"; depends=[waldo]; }; + typehint = derive2 { name="typehint"; version="0.1.2"; sha256="1n37qgphzf7lckrgfc8w3fq82zrjcvadx034qx8hrmbh4dynsl2s"; depends=[crayon rlist stringr]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; - tzdb = derive2 { name="tzdb"; version="0.1.1"; sha256="0ym5rh6abs8ash6xz0av0gfhsjp7k1lgnjvpba36zwrxyfg2wrqi"; depends=[cpp11]; }; + tzdb = derive2 { name="tzdb"; version="0.1.2"; sha256="1sl8nacx2i1h9vcvggiyzwd2zwvgrvfvsv3xa9072br62gkpay2c"; depends=[cpp11]; }; tzupdater = derive2 { name="tzupdater"; version="0.1.2"; sha256="0s1simvn76m569iq24qb3w6xli0202cjf1jr3a4qy58fs4sda2kv"; depends=[]; }; + u5mr = derive2 { name="u5mr"; version="0.1.1"; sha256="16znlmxanhg1m6fq28z62jv033fxgr4njzz50hgskprvgvx8svkj"; depends=[lifecycle]; }; uCAREChemSuiteCLI = derive2 { name="uCAREChemSuiteCLI"; version="0.2.0"; sha256="1nccgkxv57inhgvgmhwm4fr8cp28sj8n83za5gam9xx1f42mzsqk"; depends=[ChemmineR usethis]; }; - uFTIR = derive2 { name="uFTIR"; version="0.1.2"; sha256="1ds2ip02f4jh2i0n9f22v4c62xr82cak69w7yjf1k014rzq1yp60"; depends=[raster Rcpp RcppArmadillo rgdal sp]; }; - uGMAR = derive2 { name="uGMAR"; version="3.3.0"; sha256="02q9v527v9dhmc6c4sf89amrldxzphmh5dfh0y51cpsz0977rld4"; depends=[Brobdingnag gsl pbapply]; }; + uFTIR = derive2 { name="uFTIR"; version="0.1.3"; sha256="188zw6hcdp62idczkx454xya90alnpk5bzpv9756lg129r6j4rlk"; depends=[raster Rcpp RcppArmadillo sp]; }; + uGMAR = derive2 { name="uGMAR"; version="3.4.0"; sha256="1n8ishsldfmqdbxz719gakrngrqr9bj7fzddq2ri86yj9krfgas1"; depends=[Brobdingnag gsl pbapply]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.3.5"; sha256="0v24smgsz1p2wa23mc2llx7dycwmgf7zyxdhwxgwplabpmy3xzhl"; depends=[progress V8]; }; uavRmp = derive2 { name="uavRmp"; version="0.5.7"; sha256="04dv1a72b0v8lgdwl10n96953gfal6pmbbih45szdvk4zhks030j"; depends=[brew data_table exifr geosphere jsonlite link2GI log4r raster rgdal rgeos rlang rlist sf sp zoo]; }; - ubiquity = derive2 { name="ubiquity"; version="1.0.5"; sha256="14kvy0dq6i5zf5bqyxvvd3jk3zp5i4hl81zf5di237f5dgsdvbif"; depends=[deSolve digest doParallel dplyr flextable foreach ggplot2 gridExtra knitr magrittr MASS officer optimx PKNCA pso readxl rhandsontable rmarkdown rstudioapi scales shiny stringr]; }; + ubiquity = derive2 { name="ubiquity"; version="2.0.0"; sha256="1zjjwpl8zkpr4zvrhsbsj6vpiwy08vs2sw1rpx7aq940v37dvmbz"; depends=[deSolve digest doParallel dplyr flextable foreach ggplot2 knitr magrittr MASS onbrand optimx PKNCA pso readxl rhandsontable rmarkdown scales shiny stringr]; }; ubms = derive2 { name="ubms"; version="1.0.2"; sha256="1fsmyhn9awx3pa32yqnkjykyj0kbj5hc3q4w0dzjbl2ywawjbqr7"; depends=[BH ggplot2 gridExtra lme4 loo Matrix Rcpp RcppArmadillo RcppEigen rstan rstantools StanHeaders unmarked]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; uchardet = derive2 { name="uchardet"; version="1.1.0"; sha256="1dnvi45npk7l7sqbv3c1mrg0m7vrrp7iya9kjndcg9x3h0iial9z"; depends=[]; }; - uclust = derive2 { name="uclust"; version="0.2.0"; sha256="1hvyrkah0yfia5wwr42q6axja56qwnils84pg25znq39fjly6hjf"; depends=[dendextend robcor]; }; + ucie = derive2 { name="ucie"; version="1.0.0"; sha256="02dk8r96dgi35qxr20s64jrsxaivj5mvwb22bgyjg8yrbwmwzf88"; depends=[colorspace dplyr geometry pracma ptinpoly remotes rgl]; }; + uclust = derive2 { name="uclust"; version="1.0.0"; sha256="10i78fc81sy635mi8nn1gmryvcbqq7f99ws6byqlnhwyw79qmvb1"; depends=[dendextend robcor]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; udapi = derive2 { name="udapi"; version="0.1.3"; sha256="0qyn6fdh8ia913hn2dl0x99xsm20ps8zm52snswlyb00prinm668"; depends=[curl httr]; }; - udpipe = derive2 { name="udpipe"; version="0.8.5"; sha256="021n28jncfiv7492dj1ik6ylkhb3s2hpgjpc0y2zv4cdnl362zcx"; depends=[data_table Matrix Rcpp]; }; + udpipe = derive2 { name="udpipe"; version="0.8.6"; sha256="1jqx9nbxl61k6s20rjkyghkv6lq1dzf63a9gljaxmv30hwgmgrvk"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; ufs = derive2 { name="ufs"; version="0.4.3"; sha256="0gbmy7viwn55cj6z44aals02bvci0g6y2ya6x7fvjz3s4v3digd1"; depends=[digest diptest dplyr ggplot2 ggrepel ggridges gridExtra gtable htmltools kableExtra knitr pander plyr rmdpartials scales SuppDists]; }; + ugatsdb = derive2 { name="ugatsdb"; version="0.2.1"; sha256="1r4h01x9a1rhvkrqa61n0a71q5xpyf26xzdf2i99l9vif6pg8rfv"; depends=[collapse data_table DBI RMySQL writexl]; }; + ugomquantreg = derive2 { name="ugomquantreg"; version="1.0.0"; sha256="1a5vc1qgy3kp1by5bp296w980lkxcghzzxibhap2jg06jnzjfcq8"; depends=[gamlss gamlss_dist pracma Rcpp]; }; ui = derive2 { name="ui"; version="0.1.1"; sha256="15hcdzaj75ip6j7yglx8rqhp4y3yf3aw5cpbjgk1mjr4cya7lvzi"; depends=[Matrix maxLik mvtnorm numDeriv]; }; uiucthemes = derive2 { name="uiucthemes"; version="0.3.1"; sha256="1faggg8hiqw4pblq5r3m9wi3x5m6kbjq0flf88mqa993v9rpdrf6"; depends=[rmarkdown xaringan]; }; uk2us = derive2 { name="uk2us"; version="0.1.0"; sha256="1iskjfifksx9gh94zwh4kk7l984804fidzg4j1k2ww9a4j63rk19"; depends=[]; }; ukbabynames = derive2 { name="ukbabynames"; version="0.2.0"; sha256="1yggm3cv32bbshkmqvzd6pdgclk7w329dd1ghslicllaj98cni8k"; depends=[]; }; ukbtools = derive2 { name="ukbtools"; version="0.11.3"; sha256="1j5p9ypn3s781582all64kvywih1ry0lqsh1zirr35g7r46fy783"; depends=[data_table doParallel dplyr foreach ggplot2 magrittr purrr readr scales stringr tibble tidyr XML]; }; ukgasapi = derive2 { name="ukgasapi"; version="0.21"; sha256="1acl04bm8f2hgi26mpmzcwp44yv9zxarzw4r4k20b367k8g9rh8a"; depends=[httr XML]; }; - uklr = derive2 { name="uklr"; version="1.0.1"; sha256="0pr0qyf8zr8z1hzv8wziw9wddajja5dggs9cc9dw91v0kq5g5ris"; depends=[curl httr jsonlite tibble]; }; + uklr = derive2 { name="uklr"; version="1.0.2"; sha256="1x5lfzb0a64k84dscdj61kcibww8mizf9w62anmb207f8dggj7lg"; depends=[curl httr jsonlite tibble]; }; ukpolice = derive2 { name="ukpolice"; version="0.2.2"; sha256="1dwwixhiarlpdss7rhiamzcsl1k2yphgmjzh7wn2my4vxj06817l"; depends=[httr jsonlite purrr snakecase tibble]; }; ulid = derive2 { name="ulid"; version="0.3.0"; sha256="0xxkqrnlz3pkb3s1gacfzqav54w97gc0w8rh0fn1qy5rkmg2bplv"; depends=[Rcpp]; }; umap = derive2 { name="umap"; version="0.2.7.0"; sha256="191vpy84s0bar06y9z1qx43x2kc4qp7lmrcmd0cvz2pnzq722jab"; depends=[openssl Rcpp reticulate RSpectra]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="4.3.0"; sha256="1gf326l5w2kqr8gi6kz9avvkm4aziccn9vpy2pbd1ha5c6vqf6cb"; depends=[cowplot DiagrammeR DiagrammeRsvg ggplot2 kableExtra knitr lavaan MASS Matrix MuMIn mvtnorm nlme OpenMx polycor R2HTML RCurl rsvg scales xtable]; }; + umx = derive2 { name="umx"; version="4.9.0"; sha256="0512082fyjs2qx7k16ndza0xldmq1axc9zk4gwk98k208rq8wgln"; depends=[cowplot DiagrammeR DiagrammeRsvg ggplot2 kableExtra knitr lavaan MASS Matrix MuMIn mvtnorm nlme OpenMx polycor R2HTML RCurl rsvg scales xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncertainty = derive2 { name="uncertainty"; version="0.2.0"; sha256="1mq14ny7l3gy3wjsqijnm37azavyapxszjnckd861h4hgcpdcdjz"; depends=[mvtnorm triangle]; }; uncmbb = derive2 { name="uncmbb"; version="0.2.2"; sha256="0szlz52p0ywl8526mhm0i0pk1vx72kc3474cx0w47xxig83a1j9b"; depends=[dplyr rlang]; }; + uncorbets = derive2 { name="uncorbets"; version="0.1.1"; sha256="19awl797accbqv1l0g1inrxvfvvkrskfv3j9czq2p465ac4qhbgw"; depends=[assertthat NlcOptim]; }; understandBPMN = derive2 { name="understandBPMN"; version="1.1.1"; sha256="04wnyxplrn5c6jb76dw25pawwcvvn5xq80lqn5imsf31nbwybpm5"; depends=[devtools dplyr purrr R_utils Rcpp tibble tidyr usethis XML]; }; - unfoldr = derive2 { name="unfoldr"; version="0.7"; sha256="18qjsmlbqy9nhwyv288r9n3plv22fgb4g73jpyjyzy3hzfamcb17"; depends=[]; }; + unfoldr = derive2 { name="unfoldr"; version="0.7.1"; sha256="1khas7d04g4y2kwldnsja5xk1n5mys2s66pln3l0gqlsbk67na12"; depends=[]; }; unglue = derive2 { name="unglue"; version="0.1.0"; sha256="0w8ld4xllx0lj1jz8i2sj92f8136hlwri1d8ldpg1ymxj7aw93vg"; depends=[]; }; - ungroup = derive2 { name="ungroup"; version="1.3.0"; sha256="1q8082zmaplad7ypdyffjn41697r517awav78gqn816mmy3wlsvz"; depends=[Matrix pbapply Rcpp RcppEigen Rdpack rgl]; }; + ungroup = derive2 { name="ungroup"; version="1.4.2"; sha256="0rdh5h1jfc0nv6alf648vd93gfiqc10l0jgfd4i2v2b7jnypwf4q"; depends=[Matrix pbapply Rcpp RcppEigen Rdpack]; }; unheadr = derive2 { name="unheadr"; version="0.3.2"; sha256="1fj8108fifjswl8jx4f8jd59g4sqhryhsci978ysn72z663nflxl"; depends=[dplyr forcats magrittr readxl rlang stringr tibble tidyr tidyxl]; }; uni_survival_tree = derive2 { name="uni.survival.tree"; version="1.5"; sha256="1brkppsk7likpffzz0ykhqxw99qin57zzcjcib2fcdn3n8gpwq7w"; depends=[compound_Cox survival]; }; uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; @@ -16941,23 +17641,24 @@ in with self; { uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; unisensR = derive2 { name="unisensR"; version="0.3.3"; sha256="1pqfb8i3rj64l9hh1bn9mm78wlfqphgrlp7zrydznqy88f4jwgvy"; depends=[hexView vroom XML]; }; unitedR = derive2 { name="unitedR"; version="0.4"; sha256="0h4i814awb8419693jz3x5cyhs2x6y5flmz339bg6ivmg13d9h3s"; depends=[plyr]; }; - unitizer = derive2 { name="unitizer"; version="1.4.14"; sha256="1j25qzn2gs9hwbi60vjxy5vg7d3chhpfv8n7jm79zkr88rxifils"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.7-1"; sha256="0wwndzjjgqj795xvx1jwa86nwd8adfiwj0pn15yyzzk9baky2axw"; depends=[Rcpp]; }; + unitizer = derive2 { name="unitizer"; version="1.4.15"; sha256="0n47bksrwyj7pbyzh8hs25nmvmhvdnafjzs94y5ang4hw0is0cpc"; depends=[crayon diffobj]; }; + units = derive2 { name="units"; version="0.7-2"; sha256="1ss0f15h4yqzk488ilsa5d2ibrj3wzwplx4160mn600i8ciy02xr"; depends=[Rcpp]; }; unittest = derive2 { name="unittest"; version="1.4-0"; sha256="1wyiikccnkw8fzrjrb2a80lw2xyiii4zb0hrbzfszy2bd6prqxx4"; depends=[]; }; univOutl = derive2 { name="univOutl"; version="0.3"; sha256="1hhpxrpmp2wbrynx9xjndnp2sccirgky2x6ksd6yk6phmk0rbzjp"; depends=[Hmisc robustbase]; }; - unival = derive2 { name="unival"; version="1.0.2"; sha256="1sw0z7dmicmka3znrc1c5v0s9g8cpqapacdjzl5i4k5ak2qq35qp"; depends=[optimbase psych]; }; + unival = derive2 { name="unival"; version="1.1.0"; sha256="0j7fl77my2273k72s8k9v5pcb85swxfipjxmk4vw487i7aq8b1nq"; depends=[psych]; }; univariateML = derive2 { name="univariateML"; version="1.1.0"; sha256="1bnpb1g6hm8p3q73kyb4mxijzj53cfp38ns98bq12m9yvsjq1c4n"; depends=[actuar assertthat extraDistr fGarch logitnorm nakagami tibble]; }; universals = derive2 { name="universals"; version="0.0.4"; sha256="1dx7xh5l2dkamskpwfc9qsjf7df1fj54ph6s3sxhnhdbppzckd4d"; depends=[]; }; - unix = derive2 { name="unix"; version="1.5.2"; sha256="0rilc0cslwnzl5fpx8zszxsf7wkd3s7c6yza3gysw8kxw0yp36qj"; depends=[]; }; + unix = derive2 { name="unix"; version="1.5.3"; sha256="07cjwmxdivzf43nq1b1gd4i6fz9m7xhr7wsdj630q6jiy7ll8r1l"; depends=[]; }; unjoin = derive2 { name="unjoin"; version="0.1.0"; sha256="1hp9fxkb59z0cpnwxpaf5whglrljg2nrmsygdb98klxsama9gr5z"; depends=[dplyr rlang tibble]; }; - unmarked = derive2 { name="unmarked"; version="1.0.1"; sha256="1r60rr2670fwnfsfx56ql0r26279nv5ziwrd90wflyaagbf9pfx3"; depends=[lattice MASS Matrix plyr raster Rcpp RcppArmadillo]; }; - unnest = derive2 { name="unnest"; version="0.0.2"; sha256="01cx2w68rgkkh927fipxj6r1cq5xxay1wif6m2a4q9nm970nysvx"; depends=[]; }; - unpivotr = derive2 { name="unpivotr"; version="0.6.1"; sha256="1xh1m6f8gr37r14kbhnmb5a5dfammd4x9ci7p782b6r9ymnjq13p"; depends=[cellranger dplyr forcats magrittr pillar purrr rlang tibble tidyr tidyselect xml2]; }; + unmarked = derive2 { name="unmarked"; version="1.1.1"; sha256="1zabfsij6kjxzy7qj2h2x21kd24qm7kfs98095by54aadhwlyis8"; depends=[lattice lme4 MASS Matrix plyr raster Rcpp RcppArmadillo TMB]; }; + unnest = derive2 { name="unnest"; version="0.0.3"; sha256="1as245gzviq3394g36q82m1cv2rdrwjlm3icd18lcz6sl13wggdy"; depends=[]; }; + unpivotr = derive2 { name="unpivotr"; version="0.6.2"; sha256="1paqx2jn8gh4nd4zm8iwxpf38znzwwqli62ww7f3k5vwkf34r078"; depends=[cellranger dplyr forcats magrittr pillar purrr rlang tibble tidyr tidyselect xml2]; }; unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; unrtf = derive2 { name="unrtf"; version="1.4"; sha256="0ri68vfhc0acizjsk62v4l1g6l773y955yhcbqgks0vbrk01yfxg"; depends=[sys]; }; unstruwwel = derive2 { name="unstruwwel"; version="0.1.0"; sha256="1g7vw7hbf390hrsi5n9fj8na9rlaxc4d952949ffb0r81rr4blf1"; depends=[assertthat dplyr lubridate magrittr purrr R6 rlang stringr tibble tidyr]; }; unsystation = derive2 { name="unsystation"; version="0.2.0"; sha256="02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-4"; sha256="1i7m4vfslsix98dwx4jlrsldm7fhhfp25gr7aapcxqxms7ryaby6"; depends=[Brobdingnag partitions polynom]; }; + unusualprofile = derive2 { name="unusualprofile"; version="0.1.0"; sha256="0dasknh8hwbvc530d8i0xfizqxygrlz3w2bdnsgdd9sf84flqajl"; depends=[dplyr ggnormalviolin ggplot2 lavaan lifecycle magrittr patchwork purrr ragg rlang scales simstandard tibble tidyr]; }; unvotes = derive2 { name="unvotes"; version="0.3.0"; sha256="1vfyvwqfbxp29x2a0sqng6l5pkp2hc3hadp95ysnpannnsd6x0jw"; depends=[]; }; updog = derive2 { name="updog"; version="2.0.2"; sha256="0xyr4kckg185slwrq46j1qp6z0h965zk6yy55zw2h3wd3gm0cbwa"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo reshape2]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; @@ -16972,17 +17673,18 @@ in with self; { urlshorteneR = derive2 { name="urlshorteneR"; version="1.4.3"; sha256="168y1mdxhn7lhhzmzw9a7h4g9xpwh294wl53aaqp23s486p46pdz"; depends=[assertthat cli clipr httr jsonlite lubridate miniUI shiny stringr]; }; urltools = derive2 { name="urltools"; version="1.7.3"; sha256="04x3my655dd287cbsszbnf75q0swmjlxxrblcsay7a8n3df3a830"; depends=[Rcpp triebeard]; }; uroot = derive2 { name="uroot"; version="2.1-2"; sha256="0dsb1vdr2bwy64v889svhvkadg5jl9cl77mfiw79vl18b7ixjzxx"; depends=[]; }; - ursa = derive2 { name="ursa"; version="3.9.2"; sha256="0q6hnyw0gl6qipyi7s461w1i49akdvhi8ijyd8raxdizhcsqyxla"; depends=[jpeg png rgdal]; }; + ursa = derive2 { name="ursa"; version="3.9.4"; sha256="1dnqwyw1xmgsb064spynqisyx503nqqq427qvc85fbp0qrhi631l"; depends=[jpeg png rgdal]; }; us_census_geoheader = derive2 { name="us.census.geoheader"; version="1.0.2"; sha256="17mss1ggaqkd0ac7g9chgqdrpi5xlbfkxsm1jvj48rp2jfwpp4jw"; depends=[tibble]; }; usa = derive2 { name="usa"; version="0.1.0"; sha256="0scdrd6b48n019f7qp77rrkqgmapnrknalq0hml1cy7m43llqf6d"; depends=[tibble]; }; usdampr = derive2 { name="usdampr"; version="1.0.1"; sha256="0x84hzsylg22jhvhn4xhkzv4g8j17g73cpj274n7f8cwzcmpj9sx"; depends=[dplyr httr jsonlite tidyr]; }; usdarnass = derive2 { name="usdarnass"; version="0.1.0"; sha256="10fh9anpmbb7i70q3hjxbplrkqa1q86zgh8nldsf2i526p62hpm1"; depends=[httr jsonlite readr]; }; - usdata = derive2 { name="usdata"; version="0.1.0"; sha256="1qlk530biab63wk7v0f8pw80b4v3wsmlrw7k45n8gjh2a1r42xh7"; depends=[tibble]; }; + usdata = derive2 { name="usdata"; version="0.2.0"; sha256="1gnd662v6vcmjvj18c1p61q8lxahkyxnk5dbvf26j6z4jvbhk975"; depends=[tibble]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; usedist = derive2 { name="usedist"; version="0.4.0"; sha256="0ddf1zcalbrn293qmr9kdzz3x16fzc4k1bwb1pjmwnspisqfi8kj"; depends=[]; }; useful = derive2 { name="useful"; version="1.2.6"; sha256="0n50v1q75k518sq23id14jphwla35q4sasahrnrnllwrachl67v1"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; usefun = derive2 { name="usefun"; version="0.4.8"; sha256="0jbwfr04y65rlc2aa6483w9qcdqa4bmcx76j4rp9fracfszjb1hg"; depends=[dplyr]; }; usemodels = derive2 { name="usemodels"; version="0.1.0"; sha256="17cnjg7vw3f2jxkqlfvxh6kn891h49waf5k5a5vb4yaa2ay6nhp3"; depends=[cli dplyr purrr recipes rlang tidyr tune]; }; + usethat = derive2 { name="usethat"; version="0.3.0"; sha256="0i6nw3vgll6i31l95iflhq88ssw86pmz46jgw8g6k6f58rgnykmc"; depends=[microservices purrr usethis withr]; }; usethis = derive2 { name="usethis"; version="2.0.1"; sha256="1j6nzzrm2m6vi1gq0d5kxnnr9d8cy88wpmgigz3inych65x9w9pg"; depends=[cli clipr crayon curl desc fs gert gh glue jsonlite lifecycle purrr rappdirs rlang rprojroot rstudioapi whisker withr yaml]; }; usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; ushr = derive2 { name="ushr"; version="0.2.3"; sha256="1ygyqgxw849165lpk81f114kgx9015b9a9dngavjy3ffqzrbb41k"; depends=[dplyr ggplot2 tidyr]; }; @@ -16991,14 +17693,16 @@ in with self; { usmap = derive2 { name="usmap"; version="0.5.2"; sha256="0p9f2g3nslxhvm8q7zwwfdw892fxnikr1x06z6rxnkibm4k48dj0"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; utc = derive2 { name="utc"; version="0.1.5"; sha256="1lhm5rhr78cxp3cz5n6j2zkhjphj7csk026xvvhkjqdi39rrq6i4"; depends=[]; }; - utf8 = derive2 { name="utf8"; version="1.2.1"; sha256="1yw7vjn3gpkqddc91rbfh4kk0zmn2kp0jycrd3066sissh01jhdk"; depends=[]; }; + utf8 = derive2 { name="utf8"; version="1.2.2"; sha256="1x6qg19z4qih9lk3mvnmx0vailm1khp5lylw4hlwz6rssj3yw6m7"; depends=[]; }; utile_tables = derive2 { name="utile.tables"; version="0.2.1"; sha256="0bj3rg4f9dby7qzf0m95dg626ws4nz5v2vn3m50x8g3pqq8m7lmp"; depends=[dplyr purrr rlang tidyselect utile_tools]; }; utile_tools = derive2 { name="utile.tools"; version="0.2.6"; sha256="1l3l6x37290ism459kjfbgm2s0w7sa84q93nzrij1z250gv6g0rp"; depends=[lubridate purrr vctrs]; }; utile_visuals = derive2 { name="utile.visuals"; version="0.3.0"; sha256="1653wds2126b82bfm22a17xgrkybw6an5j3apg53ag5ykak9pg87"; depends=[dplyr ggplot2 gridExtra purrr]; }; - utilities = derive2 { name="utilities"; version="0.1.0"; sha256="1pslpch24i71m0bhh5fkyrznmhrf91iy838yw2xswjxglwlhq9hx"; depends=[]; }; + utilities = derive2 { name="utilities"; version="0.3.0"; sha256="1dbx9p5hx9fbp0aqnnvx3xskbkpsxa47bm5j4fx5511gqqc82i0z"; depends=[]; }; utility = derive2 { name="utility"; version="1.4.5"; sha256="0a11bxyg8la6yvxr04qbhay05jb2ihd7calc1zcisgj43kq6k7xd"; depends=[]; }; utilityFunctionTools = derive2 { name="utilityFunctionTools"; version="0.1.1"; sha256="1225nl83yka31j0adm1210kc89vs3hi9i2pqrykax109sgk0nw97"; depends=[spatstat_geom]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.6"; sha256="07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7"; depends=[data_table dplyr RCurl stringdist stringr]; }; + utiml = derive2 { name="utiml"; version="0.1.7"; sha256="16l64scyipj7plwyv6whv3h040sgvzxx43jhjxyhrcdci4pqwh94"; depends=[mldr ROCR]; }; + utr_annotation = derive2 { name="utr.annotation"; version="1.0.4"; sha256="0lldkd5fw86qxngjfvigmkdzynz0712wsk9p51xliqlavivvnpny"; depends=[AnnotationFilter AnnotationHub BiocGenerics biomaRt Biostrings data_table doParallel dplyr ensembldb foreach GenomicFeatures GenomicRanges IRanges keras readr rtracklayer stringr tidyr vcfR xml2]; }; uuid = derive2 { name="uuid"; version="0.1-4"; sha256="0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q"; depends=[]; }; uwo4419 = derive2 { name="uwo4419"; version="0.3.0"; sha256="0hk5qhyarjxz7ngj5ak37vx0rak6xv0hfb4sdrsbci3kv5fqijv7"; depends=[DescTools dplyr ggplot2 gmodels haven magrittr psych RColorBrewer rio tibble tidyr]; }; uwot = derive2 { name="uwot"; version="0.1.10"; sha256="08vxh085wnrxgwy35ksb4cr7ccjvd98pyr2zlgarqryfgc1bdqbf"; depends=[dqrng FNN irlba Matrix Rcpp RcppAnnoy RcppProgress RSpectra]; }; @@ -17020,15 +17724,16 @@ in with self; { valmetrics = derive2 { name="valmetrics"; version="1.0.0"; sha256="1fdaljdfvfmqarxdyjs9pcd8ji2z9i379vcxf65jvnhiaqlsms57"; depends=[]; }; valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; - valr = derive2 { name="valr"; version="0.6.2"; sha256="1vbp89zfylgih5acvw7lcx3a0dbbd7dhq7yhywr7kq02737qykdx"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; + valr = derive2 { name="valr"; version="0.6.3"; sha256="1lzdlw0mw06rymyjzwf4i8rx1z6zxpwxxqfsc9ggqlnhq6bfhy93"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; + valse = derive2 { name="valse"; version="0.1-0"; sha256="0l3fdsgrmalifcxscjsxsfq07v8vipg0rdw6xh94q7xw5gdfsms0"; depends=[cowplot ggplot2 MASS reshape2]; }; valueEQ5D = derive2 { name="valueEQ5D"; version="0.7.1"; sha256="1g2jq1qks1fixc8w031cbcdqmz64a7p1gmc731m9q0bawfibsyw4"; depends=[testthat]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; vamc = derive2 { name="vamc"; version="0.2.1"; sha256="04kkli4xzf3gzvs215lzch8bl877cdq3awh3mz1k321zhsa1d0jn"; depends=[Rdpack]; }; - vampyr = derive2 { name="vampyr"; version="1.0.6"; sha256="1iqlb948wvwxf69588qz0hmc1fsmbqp058qbvrzx817w3mhjcs63"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments optimbase PCovR psych semPlot]; }; + vampyr = derive2 { name="vampyr"; version="1.1.1"; sha256="137sdv4shmjg1cpndjknrys2jkvyq3p9l11nrdh0bzp9xxc1wkh1"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments PCovR psych semPlot]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.1.1"; sha256="094kd72slq0n3pk0p6zps241aszb9yql49h4mr007zf0kn8wlf8v"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; - vannstats = derive2 { name="vannstats"; version="1.0.4.15"; sha256="1q8h822dwv19qja7kfwn66zjibmykrfka6s4vsix1nnyprxxk3ra"; depends=[car dplyr ggplot2 gplots MASS purrr rlang tidyverse]; }; + vannstats = derive2 { name="vannstats"; version="1.0.7.15"; sha256="12av5v1kpgyrb9dd672kbmg167wfvq52bma7rxh1w4pkqwd54sa4"; depends=[car dplyr formula_tools ggplot2 gplots MASS purrr rlang tidyverse]; }; vanquish = derive2 { name="vanquish"; version="1.0.0"; sha256="01di1j36npl7vnyhgsagvyf6j8bxcw867dwf9dgi7l1328s7lf0l"; depends=[changepoint e1071 ggplot2 VGAM]; }; - vapour = derive2 { name="vapour"; version="0.5.5"; sha256="0mcwb6dqiwqf55gsjmpzk9cb29axvwbs7gjgqlfv7xas3zlkh9zg"; depends=[Rcpp]; }; + vapour = derive2 { name="vapour"; version="0.8.0"; sha256="0lcn6sl6win4mda36km71kdxz0wxn78krgnv9y3ip2b7m1qn8acv"; depends=[Rcpp]; }; varEst = derive2 { name="varEst"; version="0.1.0"; sha256="0i6nsxl5w4zipzrmdvx8plmxr33n405w2qhks3s7zzs3kcys32v6"; depends=[caret glmnet lm_beta SAM]; }; varImp = derive2 { name="varImp"; version="0.4"; sha256="1bxlfqxi8iiv6raawl9668yhlmbak96ahd0ljzwrilnciqbclc2b"; depends=[measures party]; }; varSel = derive2 { name="varSel"; version="0.2"; sha256="05dk2s4lzd4sxrwsfs2yqsj08qrdrfwx1fs07nb9a8sd0in6vlpj"; depends=[]; }; @@ -17042,47 +17747,49 @@ in with self; { vardpoor = derive2 { name="vardpoor"; version="0.20.1"; sha256="0jqls76xhhxc5hppy3pq5wkj9gjx3g3pzfbhnis7k10ysn76a1qj"; depends=[data_table foreach laeken MASS stringr surveyplanning]; }; varhandle = derive2 { name="varhandle"; version="2.0.5"; sha256="1l42d0s6fbjjc9l28a2m3myxkrx2c0p0b9yj8wjjjgilw19yc3lv"; depends=[]; }; variability = derive2 { name="variability"; version="0.1.0"; sha256="1nwb6jlkgzmnhkfcfww3gci5p9g21wwg4z78n8xiq6r760byaz67"; depends=[]; }; - variables = derive2 { name="variables"; version="1.1-0"; sha256="1ih132n3ci2l962xs853ra5g4f1amw8n91z37zk9108l8ajnp47z"; depends=[]; }; + variables = derive2 { name="variables"; version="1.1-1"; sha256="13hji43m9nb7rpc8p4bz1qva5jhxwdk16mcprvhb5pxp78w7clyf"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; variantspark = derive2 { name="variantspark"; version="0.1.1"; sha256="13hkp6l64hi7xlll09gin7kdlkqrkn0lggrw8147zy9ivhknhk59"; depends=[sparklyr]; }; variosig = derive2 { name="variosig"; version="0.3-1"; sha256="09cxigii0sj78yqd18p4mm9jjqvd1k2cgjy43pxpmqdhia0q2pmv"; depends=[gstat sp testthat]; }; varitas = derive2 { name="varitas"; version="0.0.2"; sha256="16y0fcisdf4pypwqshy9c45v57axa25k8cpp1pr2ij95zycs3g1k"; depends=[assertthat doParallel dplyr foreach magrittr openxlsx stringr tidyr VennDiagram yaml]; }; varjmcm = derive2 { name="varjmcm"; version="0.1.1"; sha256="1xgy3n57pxhv6wrsw9h4dranxbw6hdpm1f9ra3kwlzrpz5c3289x"; depends=[expm jmcm MASS Matrix]; }; varrank = derive2 { name="varrank"; version="0.4"; sha256="03zyv1cgrdnj7gzrp1ag0sqpxikrlsj3gg4x78gp1wxqwzq7aizx"; depends=[FNN]; }; - vars = derive2 { name="vars"; version="1.5-3"; sha256="0zc6v827ll19n088n31afgjf65zqwvyzmmj4q3ab1xhqzxfsgbw6"; depends=[lmtest MASS sandwich strucchange urca]; }; + vars = derive2 { name="vars"; version="1.5-6"; sha256="1ggkmds5ibww61mkc50bzh75py4n2g9bd6wqb3nvfw9zn58k7znx"; depends=[lmtest MASS sandwich strucchange urca]; }; varsExplore = derive2 { name="varsExplore"; version="0.3.0"; sha256="0d18wqq7fbs5ljdphsdgqmv8ab0wrzzykjhf4lqksi7n78s1fa2r"; depends=[dplyr DT glue magrittr purrr rio rstudioapi stringr tidyr]; }; - varycoef = derive2 { name="varycoef"; version="0.3.0"; sha256="0x56420535yprh3jsphy96m8jd4dwv88g3g2v3x30hjqnlkk2hvm"; depends=[DiceKriging glmnet lhs mlr mlrMBO optimParallel ParamHelpers pbapply RandomFields smoof sp spam]; }; + varycoef = derive2 { name="varycoef"; version="0.3.1"; sha256="0vhv2rraq6iqhqhjp5vdml1ppyr2xrqd97vgk4h0izk4v8r0l69k"; depends=[glmnet lhs mlr mlrMBO optimParallel ParamHelpers pbapply RandomFields smoof sp spam]; }; vasicek = derive2 { name="vasicek"; version="0.0.3"; sha256="04g5dfn8zlm8n8sxmdq9xgkf0qbvvznqx27nyan268s5wlnnabd6"; depends=[mvtnorm]; }; - vaultr = derive2 { name="vaultr"; version="1.0.2"; sha256="1b7g0jplp5dw1img7d6wm75gaycb3z8a8mzc6s0iwvhbfl8vf574"; depends=[getPass httr jsonlite R6]; }; + vasicekreg = derive2 { name="vasicekreg"; version="1.0.1"; sha256="0hlac3p6mm7x88wdlqc93byx1s2a287kvhwzhz01pz4anap30683"; depends=[gamlss gamlss_dist mvtnorm Rcpp]; }; + vaultr = derive2 { name="vaultr"; version="1.1.0"; sha256="0ciy6i6pzmxk6w42lm0iz8f69i3k8dhl7bkci0awj3rddlk02yg5"; depends=[getPass httr jsonlite R6]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; - vccp = derive2 { name="vccp"; version="0.1.0"; sha256="1c56csi59w60kmiv17vy6wlbygwbs9y3j17n204cp693ixmgqs4q"; depends=[mosum mvtnorm VineCopula]; }; + vccp = derive2 { name="vccp"; version="0.1.1"; sha256="1c0mk46c74kj5y9rfniywbxxmwb2z16szzpq6b2sw8q0qi1cf5ji"; depends=[mosum mvtnorm VineCopula]; }; vcd = derive2 { name="vcd"; version="1.4-8"; sha256="030yyhpzsj4ivwrla7p9kgvmyjh6b8fr7czf678ykxjj64ccnvr3"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-5"; sha256="0f822xmgw4iyzyz2p9bwiklj9b6faa2wy632p2895h1grgvnnxmd"; depends=[ca gnm MASS vcd]; }; vcfR = derive2 { name="vcfR"; version="1.12.0"; sha256="0lhxb3ac4fafwik9q3cds46svzf0hyca8k54chw3dpk50c0zz1yx"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; + vcmeta = derive2 { name="vcmeta"; version="1.0.0"; sha256="18jg3kqdk9162qvhkmrvq0j86nq82iwws20wrfgb4hy1w63bzfz3"; depends=[ggplot2 mathjaxr Rdpack]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; vcpen = derive2 { name="vcpen"; version="1.8"; sha256="0ccbk9mki8lsxc6y327rg3yg0fbhlx44xkcv8jaxahhsg4dp8krd"; depends=[knitr Rcpp RcppArmadillo]; }; - vcr = derive2 { name="vcr"; version="0.6.0"; sha256="0gp9wxi8zmwixiq8agzhba3abmb7a8zyy2plpavn34pp6cnka0f7"; depends=[base64enc cpp11 crul httr R6 urltools webmockr yaml]; }; + vcr = derive2 { name="vcr"; version="1.0.2"; sha256="0d7g67adnjhhaikz61nc3ivl8pzyvsk8ah0a34d8wgxknfva29sb"; depends=[base64enc cpp11 crul httr R6 rprojroot urltools webmockr yaml]; }; vcrpart = derive2 { name="vcrpart"; version="1.0-4"; sha256="1mg87jpdih33lalxhfcxbri439d4cgi7hqdrnvijr7qabjmnc7p4"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; vctrs = derive2 { name="vctrs"; version="0.3.8"; sha256="1c8v5lmap6iq4jpi7p3w05hsv2dq7rjg057pvnfyc5d1xmsqnkkz"; depends=[ellipsis glue rlang]; }; vcvComp = derive2 { name="vcvComp"; version="1.0.2"; sha256="0mip0v8gv358aadc3b4913dcz27kscx3dv15nwns20pan5jvyhv2"; depends=[]; }; vdar = derive2 { name="vdar"; version="0.1.3"; sha256="1nji97rcxp4v8pypx3z1265v85rb0yhw47i9cvacqmfxwk3hgpxj"; depends=[compositions]; }; vdg = derive2 { name="vdg"; version="1.2.1"; sha256="1jxqwg7k8ibzzdx8axhn2dx27j60qj0dlmczbfalll841ggigb45"; depends=[ggplot2 gridExtra proxy quantreg]; }; - vdiffr = derive2 { name="vdiffr"; version="0.3.3"; sha256="0i0xdr8dakbkkgrhp0zvlnv3rxhc8h5naqq416mr5zv9q8i4p8jc"; depends=[BH devtools diffobj fontquiver freetypeharfbuzz gdtools glue htmltools htmlwidgets purrr R6 Rcpp rlang shiny testthat usethis xml2]; }; + vdiffr = derive2 { name="vdiffr"; version="1.0.2"; sha256="1zjwjw8lqqnx7cxj2aik5rn1g67zsyf0bq08yfwwmsi7v2x6ly3x"; depends=[cpp11 diffobj glue htmltools lifecycle rlang testthat xml2]; }; + vdra = derive2 { name="vdra"; version="1.0.0"; sha256="1ldl3wm55a5ywc5398lzky6l6x5a9djxwrqnrd570fg4iq6d30l1"; depends=[]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; }; vecsets = derive2 { name="vecsets"; version="1.3"; sha256="1pc68v0vrn1fxh7x8cb45m0xfb0228naz4i1cnizbvll6almh5hr"; depends=[pracma]; }; - vectools = derive2 { name="vectools"; version="0.2.0"; sha256="005cgndfdzaglr02avmn2cgf3zrwxfkb280di738icriihn1nvg2"; depends=[]; }; vectorwavelet = derive2 { name="vectorwavelet"; version="0.1.0"; sha256="1z0gl28hgrqgx0ynv248a80fh190pm15c9cg1l1665acrw62kqs7"; depends=[biwavelet fields foreach iterators maps Rcpp spam]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; vegan = derive2 { name="vegan"; version="2.5-7"; sha256="0aj6m9l1vkh32sar6fyvq4p8j4h2f2f347w1300qnzgaa5lmhfz6"; depends=[cluster lattice MASS mgcv permute]; }; vegan3d = derive2 { name="vegan3d"; version="1.1-2"; sha256="01yyhrapdvs6rr5hw1ij4jnpz7mq005s35pn96snpy8ngn6ir386"; depends=[cluster rgl scatterplot3d vegan]; }; vegawidget = derive2 { name="vegawidget"; version="0.3.2"; sha256="0qrwzavfghiv6kqs5amsj1w7gn94igg8x2hkl0hzb5m8hd9mlgin"; depends=[assertthat digest glue htmltools htmlwidgets jsonlite magrittr rlang]; }; - vegclust = derive2 { name="vegclust"; version="1.7.7"; sha256="0f81jw429ib601lvbzi4q23kb5n6lvavlgw56wfqdmvvkl68vwlc"; depends=[circular Kendall MASS Rcpp sp vegan]; }; + vegclust = derive2 { name="vegclust"; version="2.0.0"; sha256="1zxgkq4ymg3w2dccfr448nmxp2kl7ws206djl2ymsrvzigivfqgs"; depends=[MASS sp vegan]; }; vegdata = derive2 { name="vegdata"; version="0.9.8"; sha256="05sgmas7hlhxx2j95b4r5y2m6hhxa2cswy80bhs8lmjmy3yqyig6"; depends=[foreign plyr xml2]; }; vegperiod = derive2 { name="vegperiod"; version="0.3.1"; sha256="178zp7hw7bicygzl4ql0a9llkmrk4kyszcvvl430pvsc5y6srg75"; depends=[]; }; vegtable = derive2 { name="vegtable"; version="0.1.6"; sha256="04bil2v9krylnak9vbl4fahv75ca695a4sb4y82f99qlylzbdqm0"; depends=[foreign plotKML qdapRegex sp stringi taxlist vegdata]; }; - vein = derive2 { name="vein"; version="0.9.1.2"; sha256="0nzdlbs1lmzjc5hqq92nkwqq049amxf5pvwcyiqa8wh86351wzyi"; depends=[data_table dotCall64 sf units]; }; + vein = derive2 { name="vein"; version="0.9.3"; sha256="141kjb1lfgpb4by9860g3xw9mz08r3kw5zmrs7asq8lhj44cn8aj"; depends=[data_table dotCall64 sf units]; }; velociraptr = derive2 { name="velociraptr"; version="1.1.0"; sha256="0a67vmv05cxc9f27aqzr6nkgy2mj3fhykwj5nb23qwfqa669a5hi"; depends=[sf]; }; vembedr = derive2 { name="vembedr"; version="0.1.4"; sha256="1dgzl67z0mjvd4l53zvqmcqfim6g7nrfmbh709a30f3nghkx059k"; depends=[assertthat glue htmltools httr magrittr rlang stringr]; }; venn = derive2 { name="venn"; version="1.10"; sha256="1r31z6s384mcrjqxm9818mvc7v23ir26wcix5lc831fwihajlhk5"; depends=[admisc]; }; @@ -17104,44 +17811,45 @@ in with self; { viafr = derive2 { name="viafr"; version="0.2.0"; sha256="08hvylrv4c8p5vazalagbkv3vhqmr9halbxkf05kfn74ssw8lljz"; depends=[assertthat crul dplyr jsonlite magrittr purrr rlang stringr tibble tidyr utf8]; }; vici = derive2 { name="vici"; version="0.5.2"; sha256="0qad8ab04ndd29kcmd388piiymablfc7xlv6iml4sxkid7z5kgby"; depends=[cowplot DT ggplot2 ggpubr nlme shiny tidyr]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; + vietnameseConverter = derive2 { name="vietnameseConverter"; version="0.3.0"; sha256="1l192xjv5jwn2aydgmkjv2g210kykinyn4cc34a09bqv4a8wgsrx"; depends=[gsubfn utf8]; }; viewshed3d = derive2 { name="viewshed3d"; version="4.0.0"; sha256="039xx39w3k3hckf0qci7j1364s47vja5s18siqjh6c5yy1w8q737"; depends=[data_table hyper_fit lidR nabor pkgcond plotrix pracma raster rgl sp viridis]; }; - vimp = derive2 { name="vimp"; version="2.1.9"; sha256="1vx74h8niqdyi5gpilpa0b04ph8b9phrf1hc8199ykrp7fxqvmha"; depends=[dplyr magrittr MASS rlang ROCR SuperLearner tibble]; }; + vimp = derive2 { name="vimp"; version="2.2.5"; sha256="13461pcvyc6rad1rf2ymmkyzcwjxw7g4fs8qd51baljhjnjmifv0"; depends=[boot data_table dplyr magrittr MASS rlang ROCR SuperLearner tibble]; }; vimpclust = derive2 { name="vimpclust"; version="0.1.0"; sha256="0ly7piz7q88sh2g7zq5b2pqph9467b4fclgq9amm0m7xc8vrv4f9"; depends=[ggplot2 mclust PCAmixdata Polychrome rlang]; }; vindecodr = derive2 { name="vindecodr"; version="0.1.1"; sha256="0yvchdf90l8lkzyba5wrpma6vjcgf19li159s8s79y8sgp5pyx7p"; depends=[httr]; }; - vinereg = derive2 { name="vinereg"; version="0.7.3"; sha256="0a87sbml9k7nhaiaj90i52aw9n3kdfkf53dwzb12dmz521bavs63"; depends=[assertthat BH kde1d Rcpp RcppEigen RcppThread rvinecopulib wdm]; }; + vinereg = derive2 { name="vinereg"; version="0.7.4"; sha256="0d9x7w6gqjfl0kvj94ypqi6c2xl2ig440xhqgvfkmyswif2w9ffi"; depends=[assertthat BH kde1d Rcpp RcppEigen RcppThread rvinecopulib wdm]; }; vines = derive2 { name="vines"; version="1.1.5"; sha256="057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1"; depends=[ADGofTest copula cubature TSP]; }; violinplotter = derive2 { name="violinplotter"; version="2.0.1"; sha256="0kin6b7alykxging8kh443mgn665sd9hqfpr2dq2c91pyvdpvdkj"; depends=[]; }; - vioplot = derive2 { name="vioplot"; version="0.3.6"; sha256="15vmrm9gwdhfg8mnq8rsg7m59kzc9h53cv96am4ds1dkm56w4n6p"; depends=[sm zoo]; }; + vioplot = derive2 { name="vioplot"; version="0.3.7"; sha256="1dmdasp3jldc41233z6r08w3j76vyyp9m3jrj7n4ahk48yd5siq6"; depends=[sm zoo]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; vip = derive2 { name="vip"; version="0.3.2"; sha256="1qsvyfms79sn46jdmq7q5r0d6gwjqhr9pll1y776rx0bj7vx1ax5"; depends=[ggplot2 gridExtra magrittr plyr tibble]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; - viridis = derive2 { name="viridis"; version="0.6.0"; sha256="1vr5s86h39r86pfxyh3pylpwhf2chdy047ny63v04f576w4hxarp"; depends=[ggplot2 gridExtra viridisLite]; }; + viridis = derive2 { name="viridis"; version="0.6.1"; sha256="1fyax36ycjiypcnxhrv58pq67qv03vfg4lx822d38jpjly54q128"; depends=[ggplot2 gridExtra viridisLite]; }; viridisLite = derive2 { name="viridisLite"; version="0.4.0"; sha256="0siwr0vq80gs3sbyd542zjb0cl9av5zqdm0fqnym5g6ribf5b6c4"; depends=[]; }; - viromeBrowser = derive2 { name="viromeBrowser"; version="1.1.0"; sha256="1dryyy2x3msarxq9ifrwkr5l0i3dq7b9zcyi91hnwpfnik3j1zz5"; depends=[Biostrings data_table DT ggplot2 markdown rbokeh Rsamtools shiny shinycssloaders shinydashboard shinyWidgets stringr]; }; - virtualNicheR = derive2 { name="virtualNicheR"; version="1.0"; sha256="1ya1nd30vm7kjc4468ra8fjyxdwq2i1l1lmajhqjvw0nsj0mh1bl"; depends=[devtools diptest]; }; virtualPollen = derive2 { name="virtualPollen"; version="1.0.0"; sha256="16q1smwh3ryids3pa7lb4i4pxmjjyl449w6fikkrm9ybj1k8gfcf"; depends=[cowplot ggplot2 mgcv plyr tidyr viridis]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.5.1"; sha256="0l86awcjq6i1lqax596xy5qfmzwiz3cwp2rczvgg37fdrym97cm3"; depends=[ade4 raster rworldmap sp]; }; virtuoso = derive2 { name="virtuoso"; version="0.1.6"; sha256="04lpypp9bbawnwmavw7xl0q448rava0bd95jwd10ywnbj5w2nkw6"; depends=[curl DBI digest fs ini odbc processx ps rappdirs]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; visNetwork = derive2 { name="visNetwork"; version="2.0.9"; sha256="0854r9znpjd9iy6j5bgrn20vj13dhp606gs3b6iy0rhym71ks2sy"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; + visR = derive2 { name="visR"; version="0.2.0"; sha256="1lbkr33kc69lv6czqjhabjdnn30f0d05ln5gzqmgr1l2w5r023wf"; depends=[broom cowplot dplyr DT ggplot2 gridExtra gt gtable kableExtra magrittr parcats rlang survival tidyr tidyselect]; }; visStatistics = derive2 { name="visStatistics"; version="0.1.1"; sha256="0lp6sf2wrjjp1zh77yhlgr9sfpls54z0bny0l36v98ik4qykky0f"; depends=[Cairo multcompView nortest vcd]; }; visTree = derive2 { name="visTree"; version="0.8.1"; sha256="1l07zfr2hagjpdxfw5290wa3ki4bl7iqxrrhda0d1bp3wmwfz0ai"; depends=[colorspace partykit rpart]; }; visa = derive2 { name="visa"; version="0.1.0"; sha256="1mx7nbbpxs4fdp781a75qvffa42dx2n6anslbfs9bnprmvzmljqr"; depends=[ggplot2 ggpmisc Matrix RColorBrewer reshape2]; }; + visachartR = derive2 { name="visachartR"; version="1.1.0"; sha256="05572bwlpyyhb9m6rkd5hx4fzvxlzhyxrzw1ks7p73nyqxw5mxrl"; depends=[htmlwidgets]; }; visae = derive2 { name="visae"; version="0.1.0"; sha256="06qrb7q5qwcmmp258psfxzxhmxy2j53gcz09gngspv0fwh92h7z8"; depends=[ca dplyr DT ggplot2 ggrepel magrittr rlang shiny shinyjs tidyr]; }; - viscomplexr = derive2 { name="viscomplexr"; version="1.1.0"; sha256="0r1lhvpbckcbfj60i7l4kflvhxdbimkany7y1ranj4h2pl79vx9x"; depends=[doParallel foreach plotrix Rcpp Rdpack scales]; }; + viscomplexr = derive2 { name="viscomplexr"; version="1.1.1"; sha256="1b45yi5xv4vq52pfa064ll3ghxgkwpbknzq94gg60vcvb7spd0if"; depends=[doParallel foreach plotrix Rcpp Rdpack scales]; }; visdat = derive2 { name="visdat"; version="0.5.3"; sha256="1ikqp29nncbw1xlwyb9dqqgcdk9q0bs3wxhnhnjpb11vcjv7cz2j"; depends=[dplyr ggplot2 glue magrittr purrr readr tibble tidyr]; }; visit = derive2 { name="visit"; version="2.1"; sha256="0kkspih7m18g5pqlwrxpgjdwqxpp23c3xyvcnvv247abl9aq81rd"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders]; }; visreg = derive2 { name="visreg"; version="2.7.0"; sha256="070yhyxxh3w16i54k790n47bgcjn4b10b6g1z553x6afjc3l3a6d"; depends=[lattice]; }; vistime = derive2 { name="vistime"; version="1.2.1"; sha256="0fdjbzdwsy6fby6rf8l940qwdkbs43is0jy7xkf6gg6vlgc9jgni"; depends=[assertive_types ggplot2 ggrepel plotly RColorBrewer rlang]; }; - vistributions = derive2 { name="vistributions"; version="0.1.1"; sha256="1s68dpcy55v6yw7ivh2xpshz6qc0qaifjd15h7rjg3zl1cx81mh3"; depends=[ggplot2 magrittr shiny]; }; - visualFields = derive2 { name="visualFields"; version="0.6.1"; sha256="1n4y3py4ciq4pbxjv4545fq45pgcba5bh6alrv959na4gs551rxm"; depends=[deldir flip gtools Hmisc matrixStats spatstat_geom]; }; + vistributions = derive2 { name="vistributions"; version="0.1.2"; sha256="1nzkbyqks38n7gp55iqhrlxqyfwxk4fvqzi9vsb45h0m0hlmwhxr"; depends=[ggplot2 magrittr]; }; + visualFields = derive2 { name="visualFields"; version="1.0"; sha256="017djw2k9h9dqrndmij061ihjfyx2fdady1vbip09683lyqhggfi"; depends=[boot combinat deldir dplyr DT gtools Hmisc htmlTable oro_dicom plotrix polyclip pracma rlang shiny shinyjs XML]; }; visualize = derive2 { name="visualize"; version="4.4.0"; sha256="1k3jpvj1yysxc4g1a1w3m1y91104aqxqv8jh9qdd23gwy7a29525"; depends=[]; }; visualpred = derive2 { name="visualpred"; version="0.1.0"; sha256="19jq9h9kiv4vbzqz8zrv5gqb1bprq5jy7mcxvdwpfnna2rja6q4z"; depends=[data_table dplyr e1071 FactoMineR gbm ggplot2 ggrepel magrittr MASS MBA mltools nnet pROC randomForest]; }; - visvow = derive2 { name="visvow"; version="1.2.0"; sha256="0xk220m5m78xgpa5rr08dn3ijn3aqh3g5wrnfni2lm3r6wqrx9zl"; depends=[Cairo DT formattable ggdendro ggplot2 ggrepel MASS PBSmapping plot3D plyr pracma psych Rdpack readxl Rtsne shiny shinyBS shinybusy splitstackshape svglite tidyr tikzDevice WriteXLS]; }; + visvow = derive2 { name="visvow"; version="1.3.3"; sha256="01mpiyc893sx8zhx6ddzhdqcgsssz516s4wm0sfkh5fpaz6h1mn5"; depends=[Cairo DT formattable ggdendro ggplot2 ggrepel MASS PBSmapping plot3D plyr pracma psych Rdpack readxl Rtsne shiny shinyBS shinybusy splitstackshape svglite tidyr tikzDevice WriteXLS]; }; vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; vitae = derive2 { name="vitae"; version="0.4.2"; sha256="1pxd612qq0jzp29qcykb4c1s9mljpmq6xfvhmyx8r9nv8j816qkv"; depends=[dplyr glue knitr pillar rlang rmarkdown tibble vctrs xfun yaml]; }; vitality = derive2 { name="vitality"; version="1.3"; sha256="17micfmlksnw167vavvhlk431fm20k74y5ggs47pgz5fwpm854zp"; depends=[]; }; - vivid = derive2 { name="vivid"; version="0.1.0"; sha256="1a50p5vc009iicn1g0ij4pclq33ws49cjfpicvcg19hz7pz65i02"; depends=[colorspace condvis2 DendSer dplyr flashlight GGally ggalt ggnewscale ggplot2 igraph RColorBrewer tidyr]; }; + vivid = derive2 { name="vivid"; version="0.2.1"; sha256="0kx9j2hgm3lsfwcdnz5fqvc2j423a2pgqchnqmlkdkl64936b549"; depends=[colorspace condvis2 DendSer dplyr flashlight GGally ggalt ggnewscale ggplot2 igraph RColorBrewer tidyr]; }; vivo = derive2 { name="vivo"; version="0.2.1"; sha256="1cfval06byviw7himr5nql34h4jaway9gb6dzya3v994p7v851cg"; depends=[DALEX ggplot2]; }; vizdraws = derive2 { name="vizdraws"; version="1.1"; sha256="19lr55swfnl79pdkybgfbkm0pvx60x64rlya0wkhdijbizyr1jvb"; depends=[dplyr glue htmlwidgets magrittr stringr tidyr]; }; vkR = derive2 { name="vkR"; version="0.2"; sha256="1pk444fcw4yyv2dnfrw9vynbpc4gwr5yv9jd41djp9yipdf6d53l"; depends=[httr jsonlite purrr XML]; }; @@ -17152,13 +17860,14 @@ in with self; { vmsbase = derive2 { name="vmsbase"; version="2.2.1"; sha256="1xxn0vm9r8kiix6whlc12r0wanf6acrl9a86h44nwm019xfmlfyp"; depends=[AMORE cairoDevice chron cluster DBI ecodist fields foreign ggmap ggplot2 gmt gsubfn gWidgets2 gWidgets2RGtk2 intervals mapdata maps maptools marmap outliers PBSmapping plotrix R6 RSQLite sp sqldf VennDiagram]; }; vocaldia = derive2 { name="vocaldia"; version="0.8.3"; sha256="1r28f2bwkkxjjv3qysdvp5v9gjrd4rz8l1zqd80qjnj552viy86z"; depends=[]; }; volcano3D = derive2 { name="volcano3D"; version="1.2.0"; sha256="10wfvqz7jf92rzhg8ys55mgv31rn2b85lji813jg2wm4k94g95cm"; depends=[ggplot2 ggpubr ggrepel plotly]; }; - volesti = derive2 { name="volesti"; version="1.1.2"; sha256="1g8vi0yal1rd0swmjaalnnm0syjdw75p6bsa8n4j957zqa055pgc"; depends=[BH Rcpp RcppEigen]; }; + volesti = derive2 { name="volesti"; version="1.1.2-2"; sha256="1814y7n0jwbc98nznrzl6apgg15whb32phb9m3lvrcx5h9xv3la1"; depends=[BH Rcpp RcppEigen]; }; volleystat = derive2 { name="volleystat"; version="0.2.0"; sha256="0n1r0bvvmba21cs3qgpnw9jxpgl2n82fhxa40sa1w2gav5rch5i6"; depends=[]; }; voronoiTreemap = derive2 { name="voronoiTreemap"; version="0.2.0"; sha256="1wvnqdrvba4ss4f3k8gzb720irdq2brv2aaq16ywifv8fnjf02r3"; depends=[data_tree DT htmlwidgets rlang shiny shinyjs]; }; vortexR = derive2 { name="vortexR"; version="1.1.7"; sha256="06i2rqbc3h2kv8jjrdlrg03xrzb3yiyzpnv2rvlkjcnn46f84bgf"; depends=[betareg data_table GGally ggplot2 glmulti gtools irr plyr R_utils stringr vortexRdata]; }; vortexRdata = derive2 { name="vortexRdata"; version="1.0.5"; sha256="0b47q3aslz4110a1bfaa103i098y2ngzrjh01rwasq3gd6xbif9n"; depends=[]; }; + voson_tcn = derive2 { name="voson.tcn"; version="0.1.8"; sha256="0vya4jal7mcq8q031zcqlbf6jldzkycpydjlfbvzcvwar5n1ljfx"; depends=[dplyr httr jsonlite magrittr openssl rlang stringr tibble tidyr]; }; vosonSML = derive2 { name="vosonSML"; version="0.29.13"; sha256="0xajffifapn0sfnp39p8iv6hdxindzi7vywcwhla9h2hmvraad6w"; depends=[data_table dplyr Hmisc httpuv httr igraph jsonlite lubridate magrittr purrr RCurl rlang rtweet stringr textutils tibble]; }; - vote = derive2 { name="vote"; version="2.2-0"; sha256="00mfwqp08zx2lfwcjw4j0h2qnvd2vpj0lacc9ja3cdbzlx2shblh"; depends=[data_table fields formattable knitr]; }; + vote = derive2 { name="vote"; version="2.3-1"; sha256="1v0q81w01j1c4d0w0w174n7zl8blb1a228vdpccanvfwixx3c1ib"; depends=[data_table fields formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.3.1"; sha256="12xv0c3g4vr23c8adkk8z7m7sx31w5mjvdg9h4qbvaimb99p2r7z"; depends=[dplyr ggplot2 jsonlite scales]; }; votesmart = derive2 { name="votesmart"; version="0.1.0"; sha256="19pp0lnvvii9ac8zr7x775j7a4lzfnjkaall47a3lsv98ql85cza"; depends=[dplyr gestalt glue httr jsonlite lubridate magrittr purrr snakecase stringr tidyr]; }; votesys = derive2 { name="votesys"; version="0.1.1"; sha256="1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920"; depends=[data_table gtools Matrix]; }; @@ -17171,39 +17880,44 @@ in with self; { vprr = derive2 { name="vprr"; version="0.1.0"; sha256="0wxcaw6r56wd8sxr5xc10xbhg9cbfz82z4cn4x0w8qhrzwl4v0zl"; depends=[dplyr ggplot2 gridExtra gsw interp lubridate magick metR oce stringr tidyr usethis]; }; vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; }; vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; - vroom = derive2 { name="vroom"; version="1.4.0"; sha256="049i65x02zafb9fzscv672ygd47igvycgh2zzmv9ijai94idxnf7"; depends=[bit64 cpp11 crayon glue hms lifecycle progress rlang tibble tidyselect vctrs withr]; }; + vrnmf = derive2 { name="vrnmf"; version="1.0.0"; sha256="1mcmpv30z9zzaq2r7h7r8pgf3fgwv3bx61b9a17a5wv39smnj0x2"; depends=[ica lpSolveAPI nnls quadprog]; }; + vroom = derive2 { name="vroom"; version="1.5.5"; sha256="1zk5nk9y64lspwhsasb7d2yg8i6ihyg2slys1qqa6qpi1266hi8x"; depends=[bit64 cli cpp11 crayon glue hms lifecycle progress rlang tibble tidyselect tzdb vctrs withr]; }; vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; }; vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; + vsd = derive2 { name="vsd"; version="0.1.0"; sha256="18whnvary4glblzx1vxf3yzsllnnnbnyijwhbw7bi3agppnwrf22"; depends=[dplyr flexsurv ggplot2 ggpubr magrittr muhaz survival survminer]; }; vsgoftest = derive2 { name="vsgoftest"; version="1.0-1"; sha256="0vypi4cf04bljmx3jwq3ixs86ivd6p7a825ik189y71fyqg9g70v"; depends=[fitdistrplus Rcpp]; }; vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; - vtable = derive2 { name="vtable"; version="1.3.1"; sha256="0nn84qd1v94i58c80f0nyigmp8xziz05ffipr2bhg4a5b93spvyd"; depends=[haven kableExtra knitr rstudioapi sjlabelled]; }; - vtreat = derive2 { name="vtreat"; version="1.6.2"; sha256="0vxwkrfbxfbqpjla96ksi9r96r4h381smh2w2jpp3hkdrw1j0k05"; depends=[digest wrapr]; }; + vtable = derive2 { name="vtable"; version="1.3.3"; sha256="1a1rw5n3j2ylhg0sjbdszkw5l9971s7lih9shmyhpikx79j4qgm5"; depends=[haven kableExtra knitr rstudioapi sjlabelled]; }; + vtreat = derive2 { name="vtreat"; version="1.6.3"; sha256="181nsjl811m3k1123bvgnnwr253sc2mbj4ljzmawz9wl7dfbwfij"; depends=[digest wrapr]; }; vtree = derive2 { name="vtree"; version="5.1.9"; sha256="118r43gfz2h8fxvzl00w4456l7wyhzxc1jczdpbdvcdipmyyg55q"; depends=[DiagrammeR DiagrammeRsvg htmlwidgets rsvg shiny]; }; + vtype = derive2 { name="vtype"; version="0.8"; sha256="0j070bn86a6hlg99h2qaf0dlbnjjsmx1zdcmvl3acymr31bqyvrj"; depends=[randomForest]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwline = derive2 { name="vwline"; version="0.2-2"; sha256="1hilr996xn5wh8kfyab55w2i1c02a8x909h4ahag5q6s7603qng5"; depends=[gridBezier polyclip]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; wBoot = derive2 { name="wBoot"; version="1.0.3"; sha256="08qgkkv6jvqmxq5gvfp7jbrc3k8mxajfww7k8a3p8888aq411p7q"; depends=[boot simpleboot]; }; - wCorr = derive2 { name="wCorr"; version="1.9.1"; sha256="1n4qd11bh0aq80fsw68vfky7nnvgkk6irsfjrknkf9bjvwvihlak"; depends=[minqa mnormt Rcpp RcppArmadillo]; }; + wCorr = derive2 { name="wCorr"; version="1.9.5"; sha256="10mnrs5ymc3ms1z5vs0h05rjq1642n3asvm77x7lxq9qwx67s3vn"; depends=[minqa mnormt Rcpp RcppArmadillo]; }; wISAM = derive2 { name="wISAM"; version="0.2.8"; sha256="0c5ic98ihpzkycsj9wg0127civm4w1rmkkw6zsjp8sfn20cl8a8z"; depends=[MASS]; }; wNNSel = derive2 { name="wNNSel"; version="0.1"; sha256="19j2yz6lvkxpmjr0vv6pjc7j1c02y0hb3gay5sy1y0xk706aggb5"; depends=[]; }; wPerm = derive2 { name="wPerm"; version="1.0.1"; sha256="0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4"; depends=[]; }; wSVM = derive2 { name="wSVM"; version="0.1-7"; sha256="0c7rblzgagwfb8mmddkc0nd0f9rv6kapw8znpwapv3fv0j2qzq7h"; depends=[MASS quadprog]; }; wTO = derive2 { name="wTO"; version="1.6.3"; sha256="1cgbw37b734ipg5qhjsil55qysfn6xmymj1q99ybkadi0axp55nn"; depends=[data_table igraph magrittr plyr reshape2 shiny som visNetwork]; }; waccR = derive2 { name="waccR"; version="0.1.0"; sha256="092p1bibyqx1gcrch68l9ilzilg5aqf46b6iagm562292cfi074l"; depends=[dplyr lubridate magrittr rvest tibble xml2]; }; + wacolors = derive2 { name="wacolors"; version="0.2.1"; sha256="03ax5r3qshfdrywqwyhz5laqvwajkvvzwq8sh9a6mi3dgr7vcd0m"; depends=[ggplot2 scales]; }; wactor = derive2 { name="wactor"; version="0.0.1"; sha256="0dc7413jb3yz0nns2lc93w32wv6m4sg17j2ip63gc12vis0nf855"; depends=[ggplot2 Matrix R6 text2vec tibble tokenizers xgboost]; }; waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; - waiter = derive2 { name="waiter"; version="0.2.0"; sha256="18mrzv0zf31805s6y86dc77m1404bsvdm0z2vcnqja5hsz8a18q7"; depends=[crayon htmltools magrittr R6 shiny]; }; + waiter = derive2 { name="waiter"; version="0.2.3"; sha256="05nybhrhj0fnd92hqnv89z4zf4aqzf8cw426jpscqk01vndp2888"; depends=[htmltools R6 shiny]; }; wakefield = derive2 { name="wakefield"; version="0.3.6"; sha256="1rssh6v8m6fim2pvm4cjw8cbni77bv5qp0rwi6vwdl3jhi5zws7n"; depends=[chron dplyr ggplot2 stringi]; }; wal = derive2 { name="wal"; version="0.1.0"; sha256="0n81c2i2wzmy33kk1k4zjjgv1irh8xqw05clif8n86qr4m0a01sv"; depends=[freesurferformats imager jpeg png spacesXYZ]; }; - waldo = derive2 { name="waldo"; version="0.2.5"; sha256="09jhwpgd6hg4qyip4r7wzpjz0jr139fyspd5ncriqimp522snqbr"; depends=[cli diffobj fansi glue rematch2 rlang tibble]; }; - walker = derive2 { name="walker"; version="1.0.2"; sha256="00hffm3x1j9d56qdad1ldfvkcnv4n6cs3f7rw4pda2qyqa1z20kz"; depends=[bayesplot BH coda dplyr ggplot2 Hmisc KFAS loo Rcpp RcppArmadillo RcppEigen rlang rstan rstantools StanHeaders]; }; + waldo = derive2 { name="waldo"; version="0.3.1"; sha256="16q1xjbl9g04l1r1x3nid9hmz1sa35q6j33bigdzh4y4zcd8qb7c"; depends=[cli diffobj fansi glue rematch2 rlang tibble]; }; + walker = derive2 { name="walker"; version="1.0.3"; sha256="16lkmyabnklrxy09xir9kylrpm7n9ilvf94ygdihd70dvnn3vqv6"; depends=[bayesplot BH coda dplyr ggplot2 Hmisc KFAS loo Rcpp RcppArmadillo RcppEigen RcppParallel rlang rstan rstantools StanHeaders]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; - wallace = derive2 { name="wallace"; version="1.0.6.3"; sha256="0qrgq1d7l75q5zz7chcdz379kpiqfh3jlqdw2pqdcs4vvpy5bnzc"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgbif rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin testthat XML zip]; }; + wallace = derive2 { name="wallace"; version="1.1.0"; sha256="0rbk6cma6w16aakqg0ibx2c6ziyb3k0lbsdp7wn3pk9zi8xrs5qk"; depends=[dismo dplyr DT ENMeval jsonlite leaflet leaflet_extras magrittr raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes sp spocc spThin zip]; }; wally = derive2 { name="wally"; version="1.0.10"; sha256="1d03vxn6q7v0nsrkd7dxkkv3siysgicv6c13fkvwmypln9vsl6sl"; depends=[data_table prodlim riskRegression]; }; walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.3"; sha256="1nk2glcvy4hyksl5ipq2mz8jy4fss90hx6cq98m3w96kzjni6jjj"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.5.0"; sha256="0y9xmh9a93lnadg83i223j2nf77jazz8m1ck1bmdf5jwj4vyzaqa"; depends=[]; }; + warabandi = derive2 { name="warabandi"; version="0.1.0"; sha256="0b1g2fpshhkd15b6fz4v3qwf425p5ahbh57acclqq6znl1acl1hg"; depends=[flextable lubridate readtext]; }; warbleR = derive2 { name="warbleR"; version="1.1.26"; sha256="1im3ifh1dwj0w8zz0j6023z615qvybm7ycy25sp9ynh67p9yza7v"; depends=[bioacoustics crayon dtw fftw knitr monitoR NatureSounds pbapply Rcpp RCurl rjson seewave stringi tuneR]; }; warp = derive2 { name="warp"; version="0.2.0"; sha256="0s0acddc5h14245hi1faycxp0fyvw6nlgaz2df7da4fpyd2f638f"; depends=[]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; @@ -17217,36 +17931,37 @@ in with self; { waterfall = derive2 { name="waterfall"; version="1.0.2"; sha256="0jy6l9mx0dixwnkychdl18sf4xh73pm0qd1jyxp9rlnv1vcragjp"; depends=[lattice]; }; waterfalls = derive2 { name="waterfalls"; version="0.1.2"; sha256="01gby1mlhrwcalizpywxcakkx2zifswb0188nrl6z9dkkd1866lm"; depends=[ggplot2]; }; waterquality = derive2 { name="waterquality"; version="0.2.6"; sha256="0386sd772l6vm5pdjj21i5byc6673hwbdixm0av6nc82pqf524xr"; depends=[caret dplyr magrittr pingr purrr raster rgdal vctrs]; }; - wavScalogram = derive2 { name="wavScalogram"; version="1.1.0"; sha256="0gfzap17dzbqrilfdaphxzddpra5ss88vnl59s6jr55cg018d2xl"; depends=[abind colorRamps fields Matrix zoo]; }; + wavScalogram = derive2 { name="wavScalogram"; version="1.1.1"; sha256="15y5gqp39jx0ggsimmf7k22qg1142c55apd04q05jqi50ljzda70"; depends=[abind colorRamps fields]; }; waveband = derive2 { name="waveband"; version="4.7.1"; sha256="1ja8jfvv790s6ih50iz6zykpq06dbzqi28cp8vyqcd1iz2bkdixp"; depends=[wavethresh]; }; waved = derive2 { name="waved"; version="1.2"; sha256="0zv4rgazk9s295pggzfa7sc062zv68dgds1ngxcz7vg1fx0qkgxg"; depends=[]; }; - waveformlidar = derive2 { name="waveformlidar"; version="1.2.0"; sha256="1dq8f9vafby3ay5qc1fvrw8h8qjjydk7fz7s5nbkm1bdhvj6smw2"; depends=[caTools data_table flux minpack_lm raster reshape2 rgdal rgeos sp splitstackshape sqldf]; }; wavefunction = derive2 { name="wavefunction"; version="1.0.0"; sha256="1g0g9i0s93lcpcx7icqn15bvkmd79slkgimspvvwp2bxdsc5nnf2"; depends=[]; }; wavelets = derive2 { name="wavelets"; version="0.3-0.2"; sha256="07706rsjdmzj46ib2kfm5lfk4bnm2wfw7rby0ixs6x0myyzxdl92"; depends=[]; }; - wavemulcor = derive2 { name="wavemulcor"; version="3.1.0"; sha256="1f7idj8vjnssh6s2h4vji1jlpf55hp4zvv5wsi2c9w7iyxwlhs5n"; depends=[plot3D RColorBrewer waveslim]; }; + wavemulcor = derive2 { name="wavemulcor"; version="3.1.2"; sha256="0a9qhcgf0l3zpwq8m476py94wb4rasy6a8xj302y6kwg3gvh1smm"; depends=[plot3D RColorBrewer waveslim]; }; waver = derive2 { name="waver"; version="0.2.1"; sha256="1kl14cd96fwrqvk35sqbgi8bf31gc2ccxxy5d1v46scwyqkb0g5l"; depends=[geosphere rgdal rgeos sp]; }; waves = derive2 { name="waves"; version="0.1.1"; sha256="17rnhfpwi71s6g3ai3j14wbgq3askf30phs881kka1k24r6z64k8"; depends=[caret dplyr ggplot2 magrittr pls prospectr randomForest rlang spectacles stringr tidyr tidyselect wesanderson]; }; waveslim = derive2 { name="waveslim"; version="1.8.2"; sha256="0ibivnhz0l06sss5rrrcvyiwg3qpbyk3qn4vx4pp90kj09x4yg0k"; depends=[]; }; wavethresh = derive2 { name="wavethresh"; version="4.6.8"; sha256="1nz74bm7pgck1i9c28svxnic8wkwkm5dhc8bhrxiih5wxb36kcwk"; depends=[MASS]; }; - wayback = derive2 { name="wayback"; version="0.2.4"; sha256="11h5bvalsdb3wwlybmplnd315y9jkb33pfhlc0231vhbcy9xkczz"; depends=[checkpoint]; }; waydown = derive2 { name="waydown"; version="1.1.0"; sha256="1yjx9cd8h8rsi44s7dcqrvfmsbjhw7vkg2z7bl4knsgbki0c978g"; depends=[Matrix numDeriv]; }; + wbacon = derive2 { name="wbacon"; version="0.5-1"; sha256="1rdmxqa8d131mdq2hbzy4w5sp010adf4x4ymb7qfrl37fqcyrla5"; depends=[hexbin]; }; wbs = derive2 { name="wbs"; version="1.4"; sha256="0ibrf30riavy6shaxgiznwh4gmnkx92260gsl0d74jkys98mlxdj"; depends=[]; }; wbsd = derive2 { name="wbsd"; version="1.0.0"; sha256="16jhimsq8symf6f2awczqkaqkdmlkzhmgk01iimhkvqlx8g2v219"; depends=[Rcpp RcppEigen]; }; wbstats = derive2 { name="wbstats"; version="1.0.4"; sha256="1va3lrksr5zg4k729xvbh176f8zcp9vfrvwxcp04znyh1rvmh6vz"; depends=[dplyr httr jsonlite lifecycle lubridate magrittr readr rlang stringr tibble tidyr]; }; wbsts = derive2 { name="wbsts"; version="2.1"; sha256="07h3wqmb9ya878fwdj49r0npks0pnd3jlnzri1cmf27c691hwka4"; depends=[mvtnorm Rcpp wavelets]; }; + wcde = derive2 { name="wcde"; version="0.0.2"; sha256="0jd7ffj0w3c200zrg3garb4ifpzj784j164vzc00brs80lnlnb57"; depends=[countrycode dplyr forcats lemon magrittr progress purrr readr stringr tibble tidyr tidyverse]; }; wcep = derive2 { name="wcep"; version="1.0.0"; sha256="1hpakygvh3b64i5hwkriwq5g8vnvghvgdj0jn9m59j43050k32cy"; depends=[coin dplyr progress tidyr]; }; wdm = derive2 { name="wdm"; version="0.2.2"; sha256="1pidlfp67x3wnmkp0qgna4vz29qx09xsy7gfbqzrjqkdi7q1dihi"; depends=[Rcpp]; }; wdman = derive2 { name="wdman"; version="0.2.5"; sha256="1yf41lsrr9dbf5n4f5hv9mlmzl736fhnp9gxkm2g9apws6gsig02"; depends=[assertthat binman processx semver yaml]; }; - wdnr_gis = derive2 { name="wdnr.gis"; version="0.1.0"; sha256="1c47qr95qqq32p2wbd55289wn5zqzzdc5ja96d5bsdhyzf05npsf"; depends=[arcpullr dplyr ggplot2 httr jsonlite rlang sf]; }; - wdpar = derive2 { name="wdpar"; version="1.0.6"; sha256="1vsijgwr2ck304yldhw1n5szqfc26s4h072x6yk7nc1ivshfls5c"; depends=[assertthat cli countrycode curl httr lwgeom progress rappdirs RSelenium sf sp tibble wdman xml2]; }; - weathercan = derive2 { name="weathercan"; version="0.5.0"; sha256="0cpqchfzz7g7ik005w4rbxcrfqbhwaqwi860xv1wp5sk5mb3ad73"; depends=[dplyr httr lubridate memoise purrr readr rlang rvest stringi stringr tidyr tidyselect xml2]; }; + wdnr_gis = derive2 { name="wdnr.gis"; version="0.1.2"; sha256="03z9qayrv34lgajvwg77b0h7z65r04wzlkaazpdfxq9wk027g3a9"; depends=[arcpullr dplyr ggplot2 httr jsonlite rlang sf]; }; + wdpar = derive2 { name="wdpar"; version="1.3.1"; sha256="051w092dnlxpa2fc9riyrlh2adkpam5mz0496r0fws17s725bsaz"; depends=[assertthat cli countrycode curl httr lwgeom progress rappdirs RSelenium sf sp tibble wdman withr xml2]; }; + weaana = derive2 { name="weaana"; version="0.1.0"; sha256="0xz6h0jp2wcdfgfpkybrl4x646n4xcjj5q67x64c94bwl0gikcvj"; depends=[dplyr lubridate magrittr reshape2 rlang settings tibble]; }; + wearables = derive2 { name="wearables"; version="0.6.2"; sha256="139m695120gasl6akyydzb4h7mjif6rg4frh4dd4y85akfipxcsd"; depends=[dplyr futile_logger ggplot2 kernlab lubridate magrittr padr RHRV signal varian waveslim xts]; }; weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.3"; sha256="14w7kkja3a1zmdc7l084iprx1czqgdfjzjc29wdlwzmaiq02c4d3"; depends=[ggmap lubridate RJSONIO XML]; }; webTRISr = derive2 { name="webTRISr"; version="0.2.0"; sha256="10xj8qvibhnywsxd1yb4laz6b38qwn483a7bflizsndsgrbzdi5n"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr sf stringr]; }; webchem = derive2 { name="webchem"; version="1.1.1"; sha256="0q7iszc91vm58ij89mfn445ijhkyrrsgrp8khwpx82v5ja01fkv1"; depends=[base64enc data_tree dplyr httr jsonlite purrr rlang rvest stringr tibble xml2]; }; webdeveloper = derive2 { name="webdeveloper"; version="0.1.0"; sha256="1bxirwf3m868qr63rxvqlrmjv1sgh9ml8f393zyrb3f2cdxh6nfq"; depends=[html5 httpuv stringi]; }; webdriver = derive2 { name="webdriver"; version="1.0.6"; sha256="0k87any9rvv367p2zwy89r3rxszsq3w78pzdq36by4ijn659la2l"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; - webex = derive2 { name="webex"; version="0.9.1"; sha256="0z85cfnjicy3q1n77ilrh43h6xh6bpr1f1iinzfk1r64031h90yl"; depends=[jsonlite knitr rmarkdown]; }; + webexercises = derive2 { name="webexercises"; version="1.0.0"; sha256="1z0dqiqk0v6h97qg89nwn9d57zn1png066va8dirk3mmk4jlfrqc"; depends=[jsonlite knitr rmarkdown yaml]; }; webfakes = derive2 { name="webfakes"; version="1.1.3"; sha256="0ncy5rma28b600vaxll7vlfhjx5xxpmhc2bkvhjb5z1cravpl4kx"; depends=[]; }; webglobe = derive2 { name="webglobe"; version="1.0.3"; sha256="0gbg4pai4cn7hdc1943aqpx4bn3vgc82zp93a1wl6bmmajv1da4b"; depends=[geojsonio httpuv jsonlite]; }; webmockr = derive2 { name="webmockr"; version="0.8.0"; sha256="0j40srwi0yasmllb9wsww4m6zkiyzqd549cis4dxd7c7p24hak8j"; depends=[base64enc crul curl fauxpas jsonlite magrittr R6 urltools]; }; @@ -17255,12 +17970,12 @@ in with self; { webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; websearchr = derive2 { name="websearchr"; version="0.0.3"; sha256="1c6dwm5g5rjq0b12zrwwi5k9760jb0ph83v4j2gm8zm0x9dhiqm9"; depends=[]; }; webshot = derive2 { name="webshot"; version="0.5.2"; sha256="0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi"; depends=[callr jsonlite magrittr]; }; - websocket = derive2 { name="websocket"; version="1.4.0"; sha256="0ziqixh05nv8h6m8zlic3zvrbn2b93xnr7pv27gyqb20kh5bmv7x"; depends=[AsioHeaders cpp11 later R6]; }; + websocket = derive2 { name="websocket"; version="1.4.1"; sha256="1ks9cyj39jnb0rkx2ii3ckmpl373m5f8sz0i4q3gk7kkv3js07r8"; depends=[AsioHeaders cpp11 later R6]; }; webuse = derive2 { name="webuse"; version="0.1.3"; sha256="09xvw0v991cq1ck2kfxblp5cngfh9j6swvh5xv420mvky0kshv32"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="1.1"; sha256="16a6ds0fnb6y8i1r9ba1hf1ydb53am57s070b3hi5jmrs84b9qik"; depends=[curl jsonlite]; }; wec = derive2 { name="wec"; version="0.4-1"; sha256="10lqh43536d44d6082rpp11q1323pmjbmgrgb8v9mrk9c1ysf50w"; depends=[dplyr]; }; weco = derive2 { name="weco"; version="1.2"; sha256="1prk8hn782pd8g2rbbaj7y10vjimqs9n8i4rab6aw6fc3k759d6b"; depends=[]; }; - weed = derive2 { name="weed"; version="1.0.6"; sha256="0x08dw4lkx5nhf2sp4adslyk58rrz34ki29vjgv62m1d3pck01p1"; depends=[countrycode dplyr forcats geonames ggplot2 here magrittr purrr readxl rgeos sf stringr tibble tidyr tidytext]; }; + weed = derive2 { name="weed"; version="1.1.1"; sha256="18kz10c580a25cxcghvp81irwqncvhjan3y5gnzy8gxm894q3p7m"; depends=[countrycode dplyr forcats geonames ggplot2 here magrittr purrr readxl rgeos sf stringr tibble tidyr tidytext]; }; weibull4 = derive2 { name="weibull4"; version="1.0.0"; sha256="1a95yw67iy7dqib33v31apxmskl019zng66jrlflbqx6p2vjdh30"; depends=[]; }; weibullness = derive2 { name="weibullness"; version="1.19.8"; sha256="19s44mxxcnhngifxshsyjr3a9zvbwywmqgby5dxd73yid1p2k9mr"; depends=[]; }; weibulltools = derive2 { name="weibulltools"; version="2.0.0"; sha256="1flgnsivam9vyrs6hwn3119s5bzczjm5qb1xjwydl1cd6r2984k5"; depends=[dplyr ggplot2 lifecycle magrittr plotly purrr Rcpp RcppArmadillo sandwich segmented SPREDA survival tibble tidyr]; }; @@ -17268,10 +17983,10 @@ in with self; { weightedScores = derive2 { name="weightedScores"; version="0.9.5.3"; sha256="1wf01z94snwbqp22waz7qays3ymg5lsxpfpafdarad2b6mg5j2g8"; depends=[mvtnorm rootSolve]; }; weightedZdiff = derive2 { name="weightedZdiff"; version="0.1.0"; sha256="1mrhjg0h7qiwya8jrmf5h4gc352ahc6fczlk5kfhqw5vkwr0b1k3"; depends=[]; }; weightr = derive2 { name="weightr"; version="2.0.2"; sha256="1qsyak91kdgv48wf6qhpfbiirlg4ba9w6rw8ynjcsnqqdvmly1lb"; depends=[ggplot2 scales]; }; - weights = derive2 { name="weights"; version="1.0.1"; sha256="1ka2kvzg464vn80qziqy4mrciy9wwd3jfasgq0d33wbiblhmxkj5"; depends=[gdata Hmisc mice]; }; + weights = derive2 { name="weights"; version="1.0.4"; sha256="1fnchf7f0hyl514bk8sc3l884kg25kb5xm4mc2l28n6hm7l6bgpg"; depends=[gdata Hmisc lme4 mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; welchADF = derive2 { name="welchADF"; version="0.3.2"; sha256="02a8w1dhc2nd74hml4z3cdlx0d2a9rcx47v341kgav620i8bn88g"; depends=[lme4]; }; - wellknown = derive2 { name="wellknown"; version="0.7.2"; sha256="13z35f8anyiih336sqqdr613bbizh16wpds90x38hyqvr0gaj9ic"; depends=[BH jsonlite Rcpp wk]; }; + wellknown = derive2 { name="wellknown"; version="0.7.4"; sha256="0d0sxmp58dscfxny1492lgw8x0ypwakmrkkl7rcfs2fz7v26ygj8"; depends=[BH jsonlite Rcpp wk]; }; welo = derive2 { name="welo"; version="0.1.0"; sha256="03c4mxkp1p6zrwjg1x1fk0rlq2hykd6cw1y2fjq5kryq3i30cgxq"; depends=[boot Rdpack xts]; }; wesanderson = derive2 { name="wesanderson"; version="0.3.6"; sha256="09mr6p2jmqdjq27cz974w5hyxgn929zp9z3inhxqmmh1582fmdi2"; depends=[]; }; wevid = derive2 { name="wevid"; version="0.6.2"; sha256="1ranmqhgfkrky7r4qk563n9nlz2syn3vj85lmfajq01csadzjdpl"; depends=[ggplot2 mclust pROC reshape2 zoo]; }; @@ -17281,19 +17996,21 @@ in with self; { wflo = derive2 { name="wflo"; version="1.6"; sha256="04qxm1vvmgxbpj1wwj7n48klhsprkj774jnj4qfhqza33mhymydb"; depends=[emstreeR plotrix progress raster rgdal sp]; }; wgaim = derive2 { name="wgaim"; version="2.0-1"; sha256="1qiyfkpsbzjr9xsq5kqq6rlqpndngkn2irdfh3gyi45h6hn118j4"; depends=[ggplot2 qtl]; }; wgeesel = derive2 { name="wgeesel"; version="1.5"; sha256="0lybvsq5168cjybzv2dbyx2z8aakcx7i7ivm8zc90haiispm9n5x"; depends=[bindata CRTgeeDR geepack MASS PoisNor]; }; - whSample = derive2 { name="whSample"; version="0.9.4"; sha256="16wcq7ppgd7zmnz8nkbjwhzdgaqkp4shgc4bjdk3kikng1b5q802"; depends=[bit64 data_table dplyr magrittr openxlsx purrr]; }; + whSample = derive2 { name="whSample"; version="0.9.6.2"; sha256="1dkw155xk36r9vmkqxlg2vw45nbpypivd8q5v3i5995biyib4l2k"; depends=[bit64 data_table dplyr magrittr openxlsx purrr]; }; wheatmap = derive2 { name="wheatmap"; version="0.1.0"; sha256="1c1xvzy194vw3idkwkqp9kyrfldzczj30cl15jw1bbnw87zcwdzy"; depends=[colorspace RColorBrewer]; }; whereami = derive2 { name="whereami"; version="0.1.9"; sha256="0mjq9haacsf0zkgh7xxx8dr67hnw5ijjdhaz8c69mfjmd2zfzfwq"; depends=[cli jsonlite rstudioapi]; }; whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; whisker = derive2 { name="whisker"; version="0.4"; sha256="1a7vz0dk95xfjvi38wbpw8vmf5qn3g8p490msz2rw0piwidmk1ks"; depends=[]; }; + whitebox = derive2 { name="whitebox"; version="2.0.0"; sha256="0qw96ma3hbwqc258chcsjgg0c6c3xi6d1q0iin3rdr8nvczinxma"; depends=[]; }; whitechapelR = derive2 { name="whitechapelR"; version="0.3.0"; sha256="0mnq5m59mw8w5g1p0h2xzlz738j397b3444km59bm5yln3j0nsbi"; depends=[igraph plyr]; }; whitening = derive2 { name="whitening"; version="1.2.0"; sha256="08j49kpbybw8j25ckzvbzqxigqzdxb56lryi06kbzcja0mlzrhvb"; depends=[corpcor]; }; whitestrap = derive2 { name="whitestrap"; version="0.0.1"; sha256="1jcnxqxvkhyz9j6jay5834ncv5fxb9qiyyyj3b8al75mqknmn8ra"; depends=[]; }; + whoa = derive2 { name="whoa"; version="0.0.2"; sha256="1wa1s2dqwkmfa3avrgqkm6w59b6vm2xnnb77q25w187wdpjq65xx"; depends=[dplyr ggplot2 magrittr Rcpp tibble tidyr vcfR viridis]; }; whoami = derive2 { name="whoami"; version="1.3.0"; sha256="19fwl7z55s4kl2xzwqwh8iwg13kdrv222vyl3kibxgwrjcjwj2y2"; depends=[httr jsonlite]; }; wiad = derive2 { name="wiad"; version="0.0.1.0"; sha256="1yr1cng5659n8chfghpyfxvqzl8b57vdjzv5m22cbcvrlq6m6p4j"; depends=[abind data_table dplyr DT shiny]; }; widals = derive2 { name="widals"; version="0.6.1"; sha256="1094yaaq2xb0ykvc1j3hs87j1p4h7zgf8mkn4han8iw5fmr9zncy"; depends=[snowfall]; }; widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; - widyr = derive2 { name="widyr"; version="0.1.3"; sha256="1mkgkn5lf3q9i3fhkz6v9lxl68kwhjn6bwxi3ks1v3njbsacnkay"; depends=[broom dplyr Matrix purrr reshape2 rlang tidyr tidytext]; }; + widyr = derive2 { name="widyr"; version="0.1.4"; sha256="1adshr1x03ww7dgxzfgy38hi3ggv4rpar2ib35j4dr3s4lyjbdwg"; depends=[broom dplyr gapminder Matrix purrr reshape2 rlang tibble tidyr tidytext]; }; wiesbaden = derive2 { name="wiesbaden"; version="1.2.4"; sha256="09p5kmr78lv6s2vdmx8fllsyl8n1dk7gm978s29cjba95zqslysq"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikifacts = derive2 { name="wikifacts"; version="0.4.2"; sha256="1fw1chha6mcrmv1f9rjg01g84bgzkgf1h76l926brjs5gsn4i414"; depends=[magrittr rvest xml2]; }; @@ -17302,36 +18019,37 @@ in with self; { wikitaxa = derive2 { name="wikitaxa"; version="0.4.0"; sha256="1z7p7dwgl8x4ambwss5dqlp4zgz52mgj0vhx2bqwizarmx9ji1xs"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; wilcoxmed = derive2 { name="wilcoxmed"; version="0.0.1"; sha256="0wnwxgm5g4fxdkrb6h124ngaw0s88yr2s8iqshb77vzj12kvb9m1"; depends=[]; }; wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; - wildlifeDI = derive2 { name="wildlifeDI"; version="0.4.0"; sha256="0ff9az6x7m9kw36bpk9dpqflbkf29z3pgr5l8lp2i24vb3pa8755"; depends=[adehabitatLT dplyr rgeos sf sp]; }; + wildlifeDI = derive2 { name="wildlifeDI"; version="0.4.1"; sha256="052pls0x5dbcr7f8vcl4c0f8zx1s9cmk9i9dw3r8b0lqd0r2sz02"; depends=[adehabitatLT dplyr rgeos sf sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; + wildviz = derive2 { name="wildviz"; version="0.1.2"; sha256="03vhacaxp5fahq5afcf1q0qvmndpqc6a63pnins7h3p8ryvlpx14"; depends=[DBI dplyr ggplot2 ggthemes httr jsonlite lubridate plotly purrr rnoaa RSQLite shiny shinythemes tibble tidyr]; }; wilson = derive2 { name="wilson"; version="2.4.2"; sha256="050hi6rigs024is1ry0yymqapgqfhzpp0ghk5ya028k71k22lksx"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets viridis zip]; }; winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; winch = derive2 { name="winch"; version="0.0.6"; sha256="1mjkbji4618f4sf4hj2lsc6r62pjlvzsvncql9ihcjj52mih9j29"; depends=[procmaps]; }; - windAC = derive2 { name="windAC"; version="1.2.4"; sha256="1b41jh1bl0kljr07pwg07cw6qxg5iawjhmj1001fl7jd7pxf90kn"; depends=[mvtnorm sf]; }; + windAC = derive2 { name="windAC"; version="1.2.6"; sha256="0yx0jiz3c4slv366sic01k8l460idh4n6a797biy7wyrp6jj241x"; depends=[mvtnorm sf]; }; windex = derive2 { name="windex"; version="2.0.2"; sha256="1zcxddf9dfkjdrlg5j2n34nmpia5vhw2s0hb28pf3wf4m1z2vrf9"; depends=[ape geiger phangorn scatterplot3d]; }; - windsoraiR = derive2 { name="windsoraiR"; version="0.1.1"; sha256="0jb17pla4bvgwnhlzan9vk2absdp459mz72fn1rrbz2dxzcmf360"; depends=[jsonlite]; }; + windsoraiR = derive2 { name="windsoraiR"; version="0.1.2"; sha256="1smd3zw5ra1fba6mds3diadcmbw59jlvmrvfzzi4fss91wv50jql"; depends=[jsonlite]; }; winfapReader = derive2 { name="winfapReader"; version="0.1-3"; sha256="1g5z9kg5ws9cdixky2y0c7dw3f7lmh3ykjxrh3jjmkm75gzgs7p0"; depends=[lubridate]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; wiqid = derive2 { name="wiqid"; version="0.3.0"; sha256="0jqnlyw5iljpm7135fgnkwjvxmbjbqiqq6lchwnjmhbb5xd3kbvr"; depends=[coda HDInterval MASS mcmcOutput plotrix truncnorm]; }; wiseR = derive2 { name="wiseR"; version="1.0.1"; sha256="187ylwhk06957x9zm5r0m6w9wg08im83myz3s4gr927ig8yv3b5f"; depends=[arules bnlearn DescTools dplyr DT graph HydeNet igraph linkcomm missRanger psych RBGL Rgraphviz rhandsontable rintrojs shiny shinyalert shinyBS shinycssloaders shinydashboard shinyWidgets visNetwork]; }; withr = derive2 { name="withr"; version="2.4.2"; sha256="1j5srffi748yxphwli56lkbh4cga0kmz38dyzganzkw0nx66mya8"; depends=[]; }; - wk = derive2 { name="wk"; version="0.4.1"; sha256="0l49pg1ds02h1qji1fi2m67mncvgd1n905i0jx07frdxy0d3b9ys"; depends=[cpp11]; }; + wk = derive2 { name="wk"; version="0.5.0"; sha256="0fj2wzswv3dfninsyw9irf52fc2d0lag5b822x841vdfpvh01mbi"; depends=[cpp11]; }; wkNNMI = derive2 { name="wkNNMI"; version="1.0.0"; sha256="0qpl1b2134kz9mjl38w93lp3g6kpv9ygv9hygpssm845k02hkw7c"; depends=[foreach infotheo]; }; wkb = derive2 { name="wkb"; version="0.4-0"; sha256="0mah538345npkb06bcj18mb6qnnx8nn7bdqmvqqpbawallh546a9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; wkutils = derive2 { name="wkutils"; version="0.1.1"; sha256="17v7bc1kcbykf5bqxjqhg5n20r5y4h4wb99zhf17ahr15gvibgr1"; depends=[Rcpp tibble vctrs wk]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; - wmm = derive2 { name="wmm"; version="1.1.0"; sha256="0l3fv9p5rg8al9yhphh4kv2z39ak6hki3ykg0fawr9sdwvkvax01"; depends=[]; }; + wmm = derive2 { name="wmm"; version="1.1.1"; sha256="0qy4cp4d8nlcqlcs4mqjv1f1kf1yh9y2wvh1ak6f049qlj7yfwfb"; depends=[]; }; wmwpow = derive2 { name="wmwpow"; version="0.1.3"; sha256="03rd75r4wih1w7srhnwqxjkirisb43y1sd2f1wzixqj8lq0dmb25"; depends=[lamW MASS smoothmest]; }; - wnl = derive2 { name="wnl"; version="0.6.1"; sha256="0p9hhg6bd2q8li7npjyakl7sr74v9534cplqypp7jgy9pl3wi100"; depends=[numDeriv]; }; + wnl = derive2 { name="wnl"; version="0.6.3"; sha256="199fkpbflnrk27gymxp7ikjxq9hwg0zydlb25fns7b8l9xl2glmg"; depends=[numDeriv]; }; wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; }; woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; }; woeBinning = derive2 { name="woeBinning"; version="0.1.6"; sha256="0x890h5fh59n54587adyzphr956fkg3px8i7c378aq1fs7k35gxs"; depends=[]; }; womblR = derive2 { name="womblR"; version="1.0.4"; sha256="0yjz4nymhqq6aqvxf0a90bw3hi1zqz1zp3mxbv2ns5v5ygh2a10p"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; - wooldridge = derive2 { name="wooldridge"; version="1.3.1"; sha256="0471x3vszf1c4fj9pk5ix8bdmp2bnq1ghnqvwzad9chvvkpzmg3l"; depends=[]; }; + wooldridge = derive2 { name="wooldridge"; version="1.4-1"; sha256="1835rn2hxr58yr829crdfjgyi02xplvxdgrp7ywzfpbhwpch6mp7"; depends=[]; }; worcs = derive2 { name="worcs"; version="0.1.8"; sha256="00h99f5xk1gaqcdy1qh2dxbmay1310w64paiv68a8003wp7yn6p0"; depends=[digest gert prereg ranger rmarkdown rticles yaml]; }; word_alignment = derive2 { name="word.alignment"; version="1.1"; sha256="0inlq96j4zkjncz2v66amz91l5y3b5lx49qi2jg6jbqdldw7aa02"; depends=[data_table openxlsx]; }; - word2vec = derive2 { name="word2vec"; version="0.3.3"; sha256="0ljwxm825is91xkqk64p97xk61kzc8ahvsk31ycjim90rf77grlp"; depends=[Rcpp RcppProgress]; }; + word2vec = derive2 { name="word2vec"; version="0.3.4"; sha256="0qj39vms6zgwb8lpmfkppayizdmhakic3pkacglary3ain61vnsk"; depends=[Rcpp RcppProgress]; }; wordbankr = derive2 { name="wordbankr"; version="0.3.1"; sha256="14ryaa25abm24wi2gyp0prxsnx1n5f4298zmzjlr08pj0sp7lgv7"; depends=[assertthat DBI dbplyr dplyr purrr quantregGrowth rlang RMySQL robustbase stringr tidyr]; }; wordcloud = derive2 { name="wordcloud"; version="2.6"; sha256="0j96yyvm6bcrrpbdx4w26piqx44a0vbsr3px9cb4zk8a8da6jwak"; depends=[RColorBrewer Rcpp]; }; wordcloud2 = derive2 { name="wordcloud2"; version="0.2.1"; sha256="1a2q42bn65q4idxq0vxysyam16q6c18inxv4dqhfy0x52j8z9x6k"; depends=[base64enc htmlwidgets]; }; @@ -17339,18 +18057,20 @@ in with self; { wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-15"; sha256="158c5fps4kvfd9mj1im8jb9rv7ipfshyagrv0q3b55ywnkrkvjqb"; depends=[rJava]; }; wordpiece = derive2 { name="wordpiece"; version="1.0.2"; sha256="1iqgwzk5zjgn09vs7jkmi8k0ia2pnzmxrrpw2k7y2cg0g65gj8nz"; depends=[digest purrr rappdirs stringi]; }; - wordpressr = derive2 { name="wordpressr"; version="0.2.2"; sha256="00fang30vr03ad79ncic65f5nn4cync0yk8w4q7kq9cykmf71zl8"; depends=[dplyr glue httr magrittr purrr tibble tidyr]; }; + wordpredictor = derive2 { name="wordpredictor"; version="0.0.2"; sha256="1lb557hkmihzd14kx4zvs9psbncbdnd4lcl2yvd9fyzkbmbxn5hp"; depends=[digest dplyr ggplot2 patchwork SnowballC stringr]; }; + words = derive2 { name="words"; version="1.0.1"; sha256="1kd9f5470c7bdayb324m4m72v7s2kknr68qbggl5m0ww29gxs9wd"; depends=[]; }; wordsalad = derive2 { name="wordsalad"; version="0.2.0"; sha256="18kgwq6f9ymm1bmbvpmxq9gz5fx0qj64439scr21kk1cvsfl4y88"; depends=[fastTextR text2vec tibble word2vec]; }; wordspace = derive2 { name="wordspace"; version="0.2-6"; sha256="11y57mzd12klwd2xzr38nvlrxg9jsi33mxd8nnvc96hgrjsgwakl"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; workflowr = derive2 { name="workflowr"; version="1.6.2"; sha256="0m3aq9xxbk4xmqsb59xil56610hgw53gm80z28mq594mhfdh0g3l"; depends=[callr fs getPass git2r glue httpuv httr knitr rmarkdown rprojroot rstudioapi stringr whisker xfun yaml]; }; - workflows = derive2 { name="workflows"; version="0.2.2"; sha256="19ipcxx4qfz28cjkgr1vny03yhmbd3m2v64v30gk5pf73nazvmaz"; depends=[cli ellipsis generics glue hardhat parsnip rlang tidyselect vctrs]; }; - workflowsets = derive2 { name="workflowsets"; version="0.0.2"; sha256="0kzr2sm9xpikc0r7qzkrm4vm03vxh7vcvqvaqvp727qfbpm4cly0"; depends=[cli dplyr generics ggplot2 prettyunits purrr rlang rsample tibble tidyr tune vctrs withr workflows]; }; + workflows = derive2 { name="workflows"; version="0.2.3"; sha256="0bca4s49qabam4ny8vckxcghj3z0xfhwfhs5h1136kihrr5pm6mw"; depends=[cli ellipsis generics glue hardhat lifecycle parsnip rlang tidyselect vctrs]; }; + workflowsets = derive2 { name="workflowsets"; version="0.1.0"; sha256="0596hb17mshpag3vjy2wl6fi2mdw54i9gc5za10vzy8vpkigb9jy"; depends=[cli dplyr generics ggplot2 hardhat lifecycle prettyunits purrr rlang rsample tibble tidyr tune vctrs withr workflows]; }; + workloopR = derive2 { name="workloopR"; version="1.1.4"; sha256="1gynlvmqxyibql5j3db9dwvc0jsc9jqzpy3d3gp43d5lcl11mcmq"; depends=[pracma signal]; }; worldmet = derive2 { name="worldmet"; version="0.9.5"; sha256="03dc93b6akah0pf36h0327jb65slsb3bypyv57cnkyxwyvni6w4s"; depends=[doParallel dplyr foreach leaflet openair purrr readr tidyr]; }; worms = derive2 { name="worms"; version="0.2.2"; sha256="183chjdi5qvsmdznvc9igcxaz769a37rwh5nzgvf5zf012a85wir"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.4.2"; sha256="1gpbyplfpcrapmci8axarrjjijsgh2dmhnsn79g1lhrafvm2ichs"; depends=[crul data_table jsonlite tibble]; }; wosr = derive2 { name="wosr"; version="0.3.0"; sha256="0fl9mizrjg3r7n7gslsxgaw3k2v63scqmvnv6341q8sq7018hzln"; depends=[httr jsonlite pbapply xml2]; }; wowa = derive2 { name="wowa"; version="1.0.1"; sha256="0jdw73z5whvb4bb9syhqscllaa31bhs81gmgckxh7w1r3pp42yha"; depends=[Rcpp]; }; - wpa = derive2 { name="wpa"; version="1.4.3"; sha256="1m80mr3scfzhz3a7wx15mwbblmlbhw7m75qlf1vy48jvqm3gwkdr"; depends=[data_table dplyr DT ggplot2 ggraph ggrepel ggwordcloud htmltools igraph magrittr markdown networkD3 proxy purrr reshape2 rmarkdown scales tidyr tidyselect tidytext]; }; + wpa = derive2 { name="wpa"; version="1.6.1"; sha256="0k8yajnxg4cccyd98nq80dz2gj9c02p87dxkbps7f59rhbacnyjq"; depends=[data_table dplyr DT ggplot2 ggraph ggrepel ggwordcloud htmltools igraph magrittr markdown networkD3 proxy purrr reshape2 rmarkdown scales tidyr tidyselect tidytext]; }; wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; }; wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; @@ -17360,22 +18080,23 @@ in with self; { wppExplorer = derive2 { name="wppExplorer"; version="2.3-4"; sha256="1pbmjg6y543aih8mxf9njfwpm090virhgqf8w0a5yx0jdfjwmz04"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2019]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; - wrGraph = derive2 { name="wrGraph"; version="1.2.3"; sha256="00674jxv9d88s41l24m2w573j8lg6rwj8mccwkj11f0265dvkqap"; depends=[RColorBrewer wrMisc]; }; - wrMisc = derive2 { name="wrMisc"; version="1.5.4"; sha256="1cg4nknly6mp1p1cg1q9w329k4b2nzfz2ak6q170k0z87pvx2m4z"; depends=[MASS]; }; - wrProteo = derive2 { name="wrProteo"; version="1.4.1"; sha256="119smm6c8xvvfi1f8rplx9xhiml7kfllrfqfxmlphs5hzr7nks5k"; depends=[knitr limma wrMisc]; }; + wrGraph = derive2 { name="wrGraph"; version="1.3.0"; sha256="1zw9c3dl5lwksggvxsch1a9brzy7a5m6yi513h4fxf31njpc5s7g"; depends=[lattice RColorBrewer wrMisc]; }; + wrMisc = derive2 { name="wrMisc"; version="1.6.2"; sha256="1wpd1pa19b5ly4fixsfavr7rpsq8a0bcw4r6wbn5cwmdl66dsknp"; depends=[MASS]; }; + wrProteo = derive2 { name="wrProteo"; version="1.4.3"; sha256="1gqmj8lmc37brbzlzci37zpn9v6shs4ahy65kbx25zgdw19bdd1n"; depends=[knitr limma wrMisc]; }; wrTopDownFrag = derive2 { name="wrTopDownFrag"; version="1.0.2"; sha256="1rdg6rzjz2h514i3c8z89mvj2j3h1s7rr5fry2mq3xvrwrgd3738"; depends=[wrMisc wrProteo]; }; wrangle = derive2 { name="wrangle"; version="0.5.2"; sha256="1b6qgwdjvwbrarp9ylgkb5ia1p5a5g7ws0jyqrwc6hii8z5yj2qb"; depends=[dplyr lazyeval magrittr rlang tidyr]; }; - wrapr = derive2 { name="wrapr"; version="2.0.7"; sha256="0ddlr6swhx9mibi4svlwkpvf1c291bw4qnr44j5734wz2nvyj3s7"; depends=[]; }; - wrassp = derive2 { name="wrassp"; version="1.0.0"; sha256="1vyy19rqj4jkw6r72vqf925lq6ha9s4bwjlsw0byigp9y9cmzmq4"; depends=[tibble]; }; + wrappedtools = derive2 { name="wrappedtools"; version="0.7.9"; sha256="00qp61syakz3wx491ygi2yhlj9b868vjkp8f3d02z8pgljvan93r"; depends=[boot coin dplyr forcats ggplot2 glue kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyverse]; }; + wrapr = derive2 { name="wrapr"; version="2.0.8"; sha256="11jbpfs9isb1aan50iw8ad86jd3hqirvxvvrr75rrqwbh3qz1sdp"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="1.0.1"; sha256="02f4r6ax91sxv05mjbz33g04i33gd3548zym5iszzx26mbr6rwkv"; depends=[tibble]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="1.4.0"; sha256="0mfzyn8n5x5x5gf382bqgq61zpw9dymrp5kzdm2sbszplmxf6xry"; depends=[]; }; wrswoR = derive2 { name="wrswoR"; version="1.1.1"; sha256="1q0nc08q8f3kl9yvcivzylykk1ar5j5dw3ian2y9nrzgzri5l10i"; depends=[logging Rcpp]; }; - wru = derive2 { name="wru"; version="0.1-11"; sha256="18yvkfffhzfna8q5hzml67a2qkbhmbrjv1r5jmslak9bh9z1mbx6"; depends=[devtools]; }; + wru = derive2 { name="wru"; version="0.1-12"; sha256="0aasndxpz9hizi2pmzraxy4ibaybd4r0l1bgd3p9zaq9h5qz8vl9"; depends=[devtools]; }; wsbackfit = derive2 { name="wsbackfit"; version="1.0-5"; sha256="18y2r6v19a4lnpa3y2q0whm5kizmd29r0abj7rcirb9fd5jqrsp2"; depends=[]; }; wsjplot = derive2 { name="wsjplot"; version="0.1.0"; sha256="1vgf823j3ychdnvg4nq59ah4rkv5lpwbg0r7sijir2b18sgxsrbi"; depends=[dplyr ggplot2 magrittr scales stringr]; }; wskm = derive2 { name="wskm"; version="1.4.40"; sha256="0x5nc3bwqawx0k95v088dsx83dm7lw5lkryjvq6bl57bgrcn7n0l"; depends=[fpc lattice latticeExtra]; }; wsrf = derive2 { name="wsrf"; version="1.7.21"; sha256="146sg5s4s0nk8a2iid5f2pnq29qisghpa4adc50r3kjhzgaf1al4"; depends=[Rcpp]; }; - wsyn = derive2 { name="wsyn"; version="1.0.3"; sha256="0515z5435k7v78ir976fxvgpy6zpmwpi5mdgmf6nnn49za6dig7b"; depends=[fields MASS]; }; + wsyn = derive2 { name="wsyn"; version="1.0.4"; sha256="0wq07n69l52rs0ddl1r3ml5jh5nflsg9mddvc3dxjdpd00mgbxnl"; depends=[fields MASS]; }; wtest = derive2 { name="wtest"; version="3.2"; sha256="063ax9mbb2dy33l1cl533mjzpvhf2akw3613pklfjg6bhprlniz7"; depends=[]; }; wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; wv = derive2 { name="wv"; version="0.1.1"; sha256="06xf3c97pjhln1v31waj8rmp4r0y2kp6v2x10pbpvi8m0nf5zfs1"; depends=[coda Rcpp RcppArmadillo simts]; }; @@ -17388,19 +18109,18 @@ in with self; { x_ent = derive2 { name="x.ent"; version="1.1.7"; sha256="15qra77dqhj27g3qx92gram4mq4n9fdidygdpvxfmcx7ww3vc6yh"; depends=[ggplot2 jsonlite statmod stringr xtable]; }; x12 = derive2 { name="x12"; version="1.9.3"; sha256="05dzf38vlf73bmwdjs6w32d0b91cs6zgdmg7afw9gs36qfi5fahn"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; - x13binary = derive2 { name="x13binary"; version="1.1.39-3"; sha256="0ji15a3jjsac6gvmriz5cvwp5rix5kxxlp9yvrg1490rxabd9y27"; depends=[]; }; - x3ptools = derive2 { name="x3ptools"; version="0.0.2"; sha256="1a3vdljd51kvd70mq9cr84r536zmby7vkd36a02z2sxabq03cl9s"; depends=[assertthat digest png rgl xml2 zoo]; }; + x13binary = derive2 { name="x13binary"; version="1.1.57-2"; sha256="13j1xylbdsmrnnccn1vcww0y0890vn057j836yqihmlgrh3prcbi"; depends=[]; }; xLLiM = derive2 { name="xLLiM"; version="2.2"; sha256="0gmy3jy1nf0fixgwcgfhrwcd85ran5ic7srzcx46akad828a4znq"; depends=[abind capushe corpcor e1071 glmnet igraph MASS Matrix mda progress randomForest]; }; - xROI = derive2 { name="xROI"; version="0.9.19"; sha256="12q77y33fqrpsvxxys3csmx04q4c7x1snwj1a4f36drmq21l1shc"; depends=[colourpicker data_table jpeg lubridate moments raster RCurl rgdal rjson shiny shinyjs sp stringr tiff]; }; + xROI = derive2 { name="xROI"; version="0.9.20"; sha256="0xa12qsw5xbbfqyv60apr4f9gx7q6rad4ywayvw8l2zla2wnhq5h"; depends=[colourpicker data_table jpeg lubridate moments raster RCurl rgdal rjson shiny shinyjs sp stringr tiff]; }; xSub = derive2 { name="xSub"; version="3.0.1"; sha256="0c3jc801pn85wm17jj911spryg6p3gq19im1506zkv8lqwsy1nab"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.5"; sha256="1scn7acp69k80q9ksygj7ns9937yim8iwhpi54ygm28h20jnfllr"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.20"; sha256="1xm7vz26vmnw290r9kc2306nnw62vi12fhql6hhndd4b8q58vb28"; depends=[htmltools knitr rmarkdown servr xfun]; }; - xaringanthemer = derive2 { name="xaringanthemer"; version="0.3.4"; sha256="0c2grk7capw3nvrxrvdk7qj7gv2i86c1aaswv2i11wrak9rdxhpv"; depends=[colorspace glue purrr whisker]; }; + xaringan = derive2 { name="xaringan"; version="0.22"; sha256="0qk8cp52g18l1pp7i5lhqbklafd20b51fhv7qil2dd397wjqcghk"; depends=[htmltools knitr rmarkdown servr xfun]; }; + xaringanthemer = derive2 { name="xaringanthemer"; version="0.4.0"; sha256="1dy0w5cb23hdjffaff5gznwgpq98b3g9aslqvq79gy7xh7asikh9"; depends=[colorspace glue purrr whisker]; }; xbreed = derive2 { name="xbreed"; version="1.0.1.1"; sha256="032i04ginyf9dyabfkygnhrkq7lqdvvyw7s41vjimy2kvjrnkkkx"; depends=[BGLR]; }; xdcclarge = derive2 { name="xdcclarge"; version="0.1.0"; sha256="1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn"; depends=[nlshrink Rcpp RcppArmadillo]; }; xergm_common = derive2 { name="xergm.common"; version="1.7.8"; sha256="03mjpafwfkmyj5ba84jydap9rp0i602izjlbd511xbxcw6dx2k0b"; depends=[ergm network]; }; xesreadR = derive2 { name="xesreadR"; version="0.2.3"; sha256="1pvdx0mxg2f885bhy4hb3kqzcgva4q7hzzaipkfzyi5lnjdsbc81"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; - xfun = derive2 { name="xfun"; version="0.22"; sha256="0ix3p0iw2c60whn5mvsflh0vhm4yixhw4s9d9v4023qhp077nw9y"; depends=[]; }; + xfun = derive2 { name="xfun"; version="0.26"; sha256="1997s00dzkyj15xk9w1r2h6i49srpgqzvhhyvd5pk1kwkd4809ly"; depends=[]; }; xgb2sql = derive2 { name="xgb2sql"; version="0.1.2"; sha256="1gw5dw0ck5hip8mv347zaswrggk395bg2hgn02bvqs0d31jhmgvi"; depends=[data_table xgboost]; }; xgboost = derive2 { name="xgboost"; version="1.4.1.1"; sha256="1i706h6yhayzbqlqa1z6fgjc56kxm3isz0jw6d26fpyfjlw6z64z"; depends=[data_table jsonlite magrittr Matrix]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; @@ -17426,15 +18146,15 @@ in with self; { xopen = derive2 { name="xopen"; version="1.0.0"; sha256="1vrvgdika1d63dwygynbv2wmd87ll8dji5dy89hj576n8hw601z2"; depends=[processx]; }; xpectr = derive2 { name="xpectr"; version="0.4.0"; sha256="1vdw01x1wmln8y6hfnqdy3frn1bbfzrqjbrvv3dmp23hq98yxxbq"; depends=[checkmate clipr dplyr fansi lifecycle plyr rlang rstudioapi testthat tibble withr]; }; xplain = derive2 { name="xplain"; version="0.2.2"; sha256="152a83ckmhns6yniy87mmjva5bkv5x3phv63l1kkcmrr9bclfgz0"; depends=[httr RCurl readr XML]; }; - xplorerr = derive2 { name="xplorerr"; version="0.1.1"; sha256="17h8z9rmqkmm6lm9gipa33mr7zxpzd5xbjk251592mwr79lwsh8n"; depends=[magrittr shiny]; }; - xpose = derive2 { name="xpose"; version="0.4.12"; sha256="0aw0jcin9s6lpwg4ahya2ig7myczqk45kinqpi3c7m03khcilafa"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xplorerr = derive2 { name="xplorerr"; version="0.1.2"; sha256="0sca6nngjs6f51di4dgzx868p75bzas0msr0kgivavsv6rj5fz0r"; depends=[Rcpp shiny]; }; + xpose = derive2 { name="xpose"; version="0.4.13"; sha256="0sbr5br8jzszn6j7jccrdfn95svdlqxn8xqjp29zdxnp3zjlkkd5"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; xpose_nlmixr = derive2 { name="xpose.nlmixr"; version="0.2.0"; sha256="12qpykbgjzgwf3n2qc3pr4nv0hifix551i4211vx9l71hvz50paz"; depends=[crayon dplyr ggplot2 magrittr nlme nlmixr rlang stringr tibble tidyr vpc xpose]; }; xpose4 = derive2 { name="xpose4"; version="4.7.1"; sha256="0y2ws8cq2waiikxw2y34s3qinaq5f832k5nglif3avd8gp2fpn3q"; depends=[dplyr gam Hmisc lattice lazyeval readr survival tibble]; }; xptr = derive2 { name="xptr"; version="1.1.3"; sha256="0352vs8dz61hgpwnf3r9r9haz3adg2wk9qxzrv313p1fcyfjz91v"; depends=[]; }; xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; xrf = derive2 { name="xrf"; version="0.2.0"; sha256="0hzplp2rbsbnmqpvf7ycjzbyf59iabzsppf13xwypdjxyr7f910l"; depends=[dplyr fuzzyjoin glmnet Matrix rlang xgboost]; }; xrnet = derive2 { name="xrnet"; version="0.1.7"; sha256="136aadrvsdg9hizjg4q12h56ih0s3w88j3jpfb54ajgdmqw3pldi"; depends=[BH bigmemory foreach Rcpp RcppEigen]; }; - xslt = derive2 { name="xslt"; version="1.4.2"; sha256="08iw0s1b8fcsw3hqzxc4mxfbw121c7ajf05nr6gbj996sr033qqr"; depends=[Rcpp xml2]; }; + xslt = derive2 { name="xslt"; version="1.4.3"; sha256="1yxiadygkm5l92ywy482h1k1igl3fw6lwizhfv27swhxjcmjl47s"; depends=[Rcpp xml2]; }; xsp = derive2 { name="xsp"; version="0.1.2"; sha256="1jbmxa234v52qji8sz4bkg24c2n65b0zh9py1wyyfzw9n1wx5w0r"; depends=[ggplot2 reshape2]; }; xspliner = derive2 { name="xspliner"; version="0.0.4"; sha256="1j3wlw39r3ahhdfq3rks1zhnlmz14f4wk7bl7gf94yffasqg6k2r"; depends=[dplyr ggplot2 magrittr mgcv pdp pROC purrr tidyr]; }; xtable = derive2 { name="xtable"; version="1.8-4"; sha256="077xfm0gphvhsay75amd9v90zk57kjgrrlgih04fyrbqqblc1gjs"; depends=[]; }; @@ -17444,16 +18164,17 @@ in with self; { xtreg2way = derive2 { name="xtreg2way"; version="1.0.0"; sha256="0wllz0frakmadavgpqhd2b8fiw6wgwh5wzd270czc6cm5bq9gfng"; depends=[MASS Matrix pracma]; }; xts = derive2 { name="xts"; version="0.12.1"; sha256="0b6a7mpyk9aw6axas7nz01gadczprwwfhii01fz31z26z555i06n"; depends=[zoo]; }; xtune = derive2 { name="xtune"; version="0.1.0"; sha256="0bpf1cx7v7q0a1jip04xd0bjg9ilagrf7wg7a9y0m6wgw7s2b9jn"; depends=[glmnet selectiveInference]; }; - xutils = derive2 { name="xutils"; version="0.0.1"; sha256="1s62libl2q22ml1j383l96yg07df6lcn0hr69hmczqpys3yszkvx"; depends=[Rcpp]; }; + xutils = derive2 { name="xutils"; version="0.0.2"; sha256="1h07gs8pj7hn64r35ld1j1zakc243aiiwdrz92viqrg7z75czdzl"; depends=[Rcpp]; }; xwf = derive2 { name="xwf"; version="0.2-3"; sha256="1byj6vjk2abm9j919107xsa3nd40zbsvxaldvv4ml3c47k1fg3kc"; depends=[mgcv]; }; xxIRT = derive2 { name="xxIRT"; version="2.1.2"; sha256="0b8yv8ixmcjiv9hlvpfdknx815smy7df7f2ixifnvhxxafgf1fwq"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2]; }; xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; }; + yaConsensus = derive2 { name="yaConsensus"; version="1.0"; sha256="1srph1yc8lr00yvx6sjm0br9h2cq94xqb9yjxfb0bqvvmskp6s2s"; depends=[doParallel foreach pheatmap]; }; yaImpute = derive2 { name="yaImpute"; version="1.0-32"; sha256="1zvkrmlj48ahg9jq0fkbn7j603fmmld57yc0gjfas2mqa7cfbvh8"; depends=[]; }; yacca = derive2 { name="yacca"; version="1.1.1"; sha256="1hxgkyxipk27p74vdkiy8a3wjymhcsc6ad3y9mf15qsl2xim6wwl"; depends=[]; }; yager = derive2 { name="yager"; version="0.1.1"; sha256="178ypdr3f0w9rb4ci8q2hshr62b7993m8q6zxc4pf0msq175n1ml"; depends=[lhs MLmetrics randtoolbox]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; yaml = derive2 { name="yaml"; version="2.2.1"; sha256="10r7g26x73am45niigm3k466030nymnr3v3fjljafzrr5aybf58i"; depends=[]; }; - yamlet = derive2 { name="yamlet"; version="0.7.5"; sha256="0nxnjiwgnmqpzrb6532l8kwxj2c741bj1vabmx0dayg7sa1fl4c2"; depends=[csv dplyr encode ggplot2 rlang spork tidyr units xtable yaml]; }; + yamlet = derive2 { name="yamlet"; version="0.7.7"; sha256="0yxvwf1qgjzqci0agnsd91anfjnc892dzqzdrxbqxsrcz28zhvcj"; depends=[csv dplyr encode ggplot2 rlang spork tidyr units xtable yaml]; }; yamlme = derive2 { name="yamlme"; version="0.1.1"; sha256="1cknx8ndcb9rz1j7z27244vba8hxyh5sa9zwsv6rwk9g1c52vmyg"; depends=[]; }; yap = derive2 { name="yap"; version="0.1.1"; sha256="0m126vpfvlmwkpy14i9wbzr51hb8r6s3wcdm3vp9izfccpnxfxl2"; depends=[lhs randtoolbox]; }; yaps = derive2 { name="yaps"; version="1.2.5"; sha256="0309vc67v5kfbdcah5gnvdqwdxir4k1ik47dw6msw2hvg6lpqvqf"; depends=[circular cowplot data_table ggplot2 ggrepel nloptr plyr Rcpp RcppEigen reshape2 splusTimeSeries tictoc TMB viridis zoo]; }; @@ -17468,52 +18189,55 @@ in with self; { yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; yll = derive2 { name="yll"; version="1.0.0"; sha256="0lf3cd6pfzki29nk2iy0vd6v4dw6zlsbrjh2839zq5vlpiimsvck"; depends=[]; }; - ymlthis = derive2 { name="ymlthis"; version="0.1.4"; sha256="1nwb6frb6y1q401lxnhpcvnsnzzi9w7n45nlnbs3jn17bz31w1vh"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; + ymlthis = derive2 { name="ymlthis"; version="0.1.5"; sha256="02flsiqzpasyvskzlygllmrc1vbd4cv6yx4cdfiqrcq1806kdrf2"; depends=[crayon fs glue magrittr miniUI purrr rlang rmarkdown rstudioapi shiny shinyBS stringr usethis whoami withr yaml]; }; yonder = derive2 { name="yonder"; version="0.2.0"; sha256="1ilzn17w6skd0dhwxyrgnfzyazafp8hsi8q6pfxz6k16cd668mc0"; depends=[htmltools magrittr shiny]; }; - yorkr = derive2 { name="yorkr"; version="0.0.22"; sha256="0ai6v6di796x5nk83i6x371rbr8x8xbxh2447vlf3zybppqbyigp"; depends=[dplyr ggplot2 gridExtra lubridate reshape2 rpart_plot yaml]; }; - yotover = derive2 { name="yotover"; version="0.3.5"; sha256="13ifa2b94g9iv405hddiw77k3hryaaf72w2jd1d5ln49p2fhixhc"; depends=[broom cli crayon DBI dbplyr dplyr duckdb ggplot2 httr lmtest magrittr Matrix msm purrr rappdirs rstudioapi sandwich tibble tidyr]; }; + yorkr = derive2 { name="yorkr"; version="0.0.26"; sha256="0dfmhca2ppjar2w6lxppzrjgdvmgd8wnh2ianpcfp5lbbav2jwp5"; depends=[dplyr ggplot2 gridExtra lubridate reshape2 rpart_plot yaml]; }; youtubecaption = derive2 { name="youtubecaption"; version="1.0.0"; sha256="15cafl7b03xrql2y2ayy6ajf6v764wym3xqs4pbzlf6ncy8qwl5r"; depends=[dplyr magrittr purrr reticulate stringr tibble writexl]; }; - ypr = derive2 { name="ypr"; version="0.5.1"; sha256="15544gyxzavbamjfjsiq662c9y2zkfxn14a481318358sdhln5vn"; depends=[chk ggplot2 lifecycle purrr scales yesno]; }; + yowie = derive2 { name="yowie"; version="0.1.0"; sha256="1sm3dg4sirvlb17ciwldvnc1zzfgwxm38x1k2n99nwa6sygn1nrw"; depends=[tsibble]; }; + ypr = derive2 { name="ypr"; version="0.5.2"; sha256="1bbcwy4hngai6cajgcir1g6hdjh9xdpfcxqzm8ba8ikyjfzwn9bw"; depends=[chk ggplot2 lifecycle purrr scales yesno]; }; yuima = derive2 { name="yuima"; version="1.9.6"; sha256="1iqcv6m2lbdnpkcmgbmjhdn233pq3b2g6s9naiq3ks0fyv04zpar"; depends=[boot cubature expm glassoFast mvtnorm Rcpp RcppArmadillo zoo]; }; yuimaGUI = derive2 { name="yuimaGUI"; version="1.3.0"; sha256="1znwfkhnmv9m32izikziqpgxx8gpw50786r81va808x7q058cp5n"; depends=[DT ggplot2 ghyp plotly quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; - yum = derive2 { name="yum"; version="0.0.1"; sha256="1q8yxn18nia7jh6g2016hxm81d2jak8pwylr6nai9kfynv9wri0g"; depends=[yaml]; }; + yulab_utils = derive2 { name="yulab.utils"; version="0.0.2"; sha256="1haq6k0r64gs76p2vvrm42m64r8s32kzyz573pw9789y32zn0s5q"; depends=[]; }; + yum = derive2 { name="yum"; version="0.1.0"; sha256="1k9q34n1pzv4c7hp7cd4yhm8v1qv41an8vfh65n4byvyzipxp85y"; depends=[yaml]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; zCompositions = derive2 { name="zCompositions"; version="1.3.4"; sha256="15cfqk1vzamz66y9idnrwxlrp2sirkp44gwkcmia4s13x5pwh8mf"; depends=[MASS NADA truncnorm]; }; zGPS_AO = derive2 { name="zGPS.AO"; version="0.1.0"; sha256="18dqssnj4gch1yg0qvrj4j2ry95sy6a9z8yz2zi8nzhhsj8dz1qq"; depends=[doParallel doRNG dplyr foreach ggplot2 hrbrthemes MASS plotly pscl questionr viridis]; }; zTree = derive2 { name="zTree"; version="1.0.6"; sha256="1mywxrx6bw7dzhrdwyxbjzc8ikgvw423zycyji0jjr69cfhpmywv"; depends=[plyr]; }; zalpha = derive2 { name="zalpha"; version="0.2.0"; sha256="0wyk4smrch5c0jnzi8z0in1hcbfsddgw4n28dljj917wyg5cnmqd"; depends=[]; }; zbank = derive2 { name="zbank"; version="0.1.0"; sha256="0vzvlri3sncvbz2cdg8wzlpskm1lq9ji0jrfy5cx4ib19m6gxhpc"; depends=[crul jsonlite tibble]; }; - zcurve = derive2 { name="zcurve"; version="1.0.8"; sha256="1n78gg3zj41gxnpf3arypfwl9hwsimfdbmmiyadaz41iqfpw1dxh"; depends=[evmix nleqslv Rcpp Rdpack]; }; + zcurve = derive2 { name="zcurve"; version="1.0.9"; sha256="0hrgf8id2fdy5xakgif508kl8sddil01mwrq4fnchajzrgp2lb9w"; depends=[evmix nleqslv Rcpp Rdpack]; }; zdeskR = derive2 { name="zdeskR"; version="0.1.1"; sha256="0fqayn2g7903qs51x4ymy0aq36bwrgvp1k2701cd02zvnxy91l3j"; depends=[dplyr httr jsonlite magrittr plyr purrr tidyr]; }; zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; }; zebu = derive2 { name="zebu"; version="0.1.3.0"; sha256="1rlcrvhic110h8r0mqwhkzq8w566jfymxpcwv63bvs7fd8j98vsv"; depends=[foreach ggplot2 iterators plyr reshape2]; }; zeitgebr = derive2 { name="zeitgebr"; version="0.3.5"; sha256="1h2zx3ah1xdyyag40ragrv7gvpnlzqmappbnjp971dn9khqdxfqs"; depends=[behavr data_table lomb pracma WaveletComp]; }; - zen4R = derive2 { name="zen4R"; version="0.4-2"; sha256="0wbh12frr75rcb4rjk6jymrjr6jaixik5br61bhmnax1hhwkp3k3"; depends=[httr jsonlite keyring R6 xml2]; }; + zen4R = derive2 { name="zen4R"; version="0.5"; sha256="074isxa7i4867cb849ibiw67l8j1f201j4ys7y7w7lb87gyaf8x2"; depends=[httr jsonlite keyring R6 xml2]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; - zenplots = derive2 { name="zenplots"; version="1.0.3"; sha256="0nazbivb3cz2ccswnffi31i8l32iqprpzrf5v7iazw9s40c6nxrq"; depends=[graph loon MASS PairViz]; }; + zenplots = derive2 { name="zenplots"; version="1.0.4"; sha256="1r105ay0p00wfly8z54dg18i1fq7ppvxzri49i7zrlimqawzv19s"; depends=[graph loon MASS PairViz]; }; zeroEQpart = derive2 { name="zeroEQpart"; version="0.1.0"; sha256="1n24nqyl0irpyspwx4b73xy228a84aa8zsn9fcf2lrlni5vyzmm0"; depends=[MASS ppcor]; }; zetadiv = derive2 { name="zetadiv"; version="1.2.0"; sha256="0068k5i0dvii3dckgis5424xb7sqqq9s670vgfavc0vncnlycxqk"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; }; zfit = derive2 { name="zfit"; version="0.1.0"; sha256="0r6qdygpqd06vmfvj68ksxm3bz0jgalczr6rngcr4xl2mkb1cn38"; depends=[magrittr]; }; zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; - zip = derive2 { name="zip"; version="2.1.1"; sha256="0b3wmbx5v0i1scylgk4nli2ljg4p12wx7a1sqljklv9969wl3p8i"; depends=[]; }; + zip = derive2 { name="zip"; version="2.2.0"; sha256="1n5ryjdj3i16b4mdp29wapgaklz3yzas5k8ffx7q6fa0jry9i5cz"; depends=[]; }; zipR = derive2 { name="zipR"; version="0.1.1"; sha256="1aaw3dslhsw3zgxvkc1v60vsk44x64i4qmjwx0gq4f7dad1rbiqp"; depends=[]; }; zipangu = derive2 { name="zipangu"; version="0.2.3"; sha256="03msi9jz3wld83ny8za93mpnb1d856wi9ls08apih23x4272y8g2"; depends=[arabic2kansuji dplyr lifecycle lubridate magrittr purrr rlang stringi stringr tibble]; }; - zipcodeR = derive2 { name="zipcodeR"; version="0.3.0"; sha256="0pkj08kar2mzlkmi4i3samyjhy3vxx7mhgfm0z5zdhpp33i5gz50"; depends=[dplyr raster rlang stringr tidycensus tidyr udunits2]; }; + zipcodeR = derive2 { name="zipcodeR"; version="0.3.3"; sha256="16g8y5k9ya528d62xmh2v6kh47pgjapsxsfmf9pqsnph6fd9rf6a"; depends=[curl DBI dplyr httr jsonlite raster rlang RSQLite stringr tidycensus tidyr]; }; zipfR = derive2 { name="zipfR"; version="0.6-70"; sha256="15ng7rj7qbgxajx8jb9kv04xmbidg9wwzxr2xaskmlaxrxlqac8c"; depends=[]; }; zipfextR = derive2 { name="zipfextR"; version="1.0.2"; sha256="03rlvvw7rfbhsbwd5njmgkkkrxq1lgjdydmpkn6h1hi97pc0gbhh"; depends=[copula tolerance VGAM]; }; ziphsmm = derive2 { name="ziphsmm"; version="2.0.6"; sha256="0lm6m2g9jd1v7gxv4viych8c59phbvz1yly1ydgajl8q251d8n87"; depends=[pracma Rcpp RcppArmadillo]; }; + zipsae = derive2 { name="zipsae"; version="1.0.2"; sha256="03kwfpjpwxqlphdy7xyhsf7d0mcg67jhvm7yz4i73ckmjdmq7wrd"; depends=[]; }; zlog = derive2 { name="zlog"; version="1.0.0"; sha256="1d5j31p0h3rrn230087h3ngpvwknlisjv0f1qdbicdj9m177spci"; depends=[]; }; zoeppritz = derive2 { name="zoeppritz"; version="1.0-8"; sha256="1711szx9zz17q6pfinyzlyrw7m9772c8ywlixqar2l165bkjalgm"; depends=[]; }; - zoib = derive2 { name="zoib"; version="1.5.4"; sha256="10hv5li1l9gm1bl3k3c9qcmzkqa4ri0kccrsgw1mn8ddn11g9m0a"; depends=[abind coda Formula matrixcalc rjags]; }; + zoib = derive2 { name="zoib"; version="1.5.5"; sha256="0inm7f2pc68ksqxvq12xp9jc99vj7ydylvs24ip12nksbj5k1n8f"; depends=[abind coda Formula rjags]; }; zoltr = derive2 { name="zoltr"; version="0.5.1"; sha256="12zh7y3pwidclscgvd0b0iaqq9j5y8mc8xd6pz4vs0jy5qs3ahar"; depends=[base64url dplyr httr jsonlite magrittr MMWRweek mockery readr rlang webmockr]; }; zonator = derive2 { name="zonator"; version="0.6.0"; sha256="1plxchpd4ypp36phl13pi9yvlrqi3lk83lv5rldrhdqynhcgfw2k"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; - zonebuilder = derive2 { name="zonebuilder"; version="0.0.1"; sha256="1r1b8dqh1hhi4p4b5nnap4y5lmls86zfiks16n36qk0pz4n71bb1"; depends=[RColorBrewer sf]; }; + zonebuilder = derive2 { name="zonebuilder"; version="0.0.2"; sha256="0mxf3dz0d6bi5wwjilqivdxhy5ypnq5svky8zygha0clv45l4dmn"; depends=[RColorBrewer sf]; }; zoo = derive2 { name="zoo"; version="1.8-9"; sha256="18vjywalpgzqyk66gajb8x1yp8avdaaf11ykynld9fd8cy82bgmp"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; zooimage = derive2 { name="zooimage"; version="5.5.2"; sha256="0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"; depends=[digest DT filehash jpeg MASS mda mlearning png shiny svDialogs svMisc tiff]; }; - zoolog = derive2 { name="zoolog"; version="0.3.1"; sha256="0md4kmnk0gwl3kmc7id7v878x0z90jwkl01cilafsv556bhzj1m4"; depends=[Rdpack stringi]; }; + zoolog = derive2 { name="zoolog"; version="0.4.1"; sha256="1wxxxscw4ji4p4599vdw6vcrkqm0g75x1gh13m4758lb51wav9ks"; depends=[Rdpack stringi]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; + zoomGroupStats = derive2 { name="zoomGroupStats"; version="0.1.0"; sha256="0gndiq92cy6gi7f833hdjvqii3cn83wz5rjvygcvjl3dw4pwv966"; depends=[data_table dplyr lubridate magick openxlsx paws pbapply stringr syuzhet]; }; zoon = derive2 { name="zoon"; version="0.6.5"; sha256="02y29vr2yn8al69km8faiqrwjrc1r3hsvw3dg8lwjr65cxw1krip"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap sp testthat]; }; zscorer = derive2 { name="zscorer"; version="0.3.1"; sha256="0aijhs0fyird5gq68x4dxchb02mxa7ijk10k9zjhngghxbjj7iqn"; depends=[shiny]; }; ztable = derive2 { name="ztable"; version="0.2.2"; sha256="0wxcdb7yp2r6w5iznz1k49npp5sn4jiybfcj30s3198hkcnv0r8y"; depends=[flextable magrittr officer RColorBrewer rstudioapi scales stringr]; }; @@ -17521,4 +18245,39 @@ in with self; { ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; zyp = derive2 { name="zyp"; version="0.10-1.1"; sha256="03cxpkfbhrx1fy8l0dl9a13ghz93cqq6877wa8rig09ksdiivaw9"; depends=[Kendall]; }; zzlite = derive2 { name="zzlite"; version="0.1.2"; sha256="0vi1slx2s4r5zf82lazqv0c3m12xq73wlgsbz6af4y00h0bkr3ps"; depends=[httr jsonlite]; }; + AnimalAPD = derive2 { name="AnimalAPD"; version="1.0.0"; sha256="1csa6disrg11hpxg4zw0jay15srw9lsgbhl1xgl7hpdr3nqsv3s7"; depends=[activityGCMM brms circular ggplot2 gridExtra loo overlap]; broken = true; }; + BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; broken = true; }; + BayesSenMC = derive2 { name="BayesSenMC"; version="0.1.3"; sha256="0d89s9m3fv9a7iyncqg142s4gb59bz8m60y9w6hsbzhlcz7vd8x1"; depends=[BH dplyr ggplot2 lme4 Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; broken = true; }; + BayesXsrc = derive2 { name="BayesXsrc"; version="3.0-1"; sha256="0l8c6xsyqj09m722hdanr1d9n6a1ps77ybm1jaqmp86bqmq1br03"; depends=[]; broken = true; }; + DNH4 = derive2 { name="DNH4"; version="0.1.11"; sha256="15a1hq8f8nz200apbm28dwyphl18rhicmf7irsdj0z1n1j898c44"; depends=[httr rvest tibble tidyr xml2]; broken = true; }; + Guerry = derive2 { name="Guerry"; version="1.7.1"; sha256="0ip9143qjad1zwsj12hm5s8qbc05m87zg0vwfnjfk49wfz7kd34z"; depends=[sp]; broken = true; }; + ICSsmoothing = derive2 { name="ICSsmoothing"; version="1.2.5"; sha256="08m8p6y5zk54ha3wp5x9xbx6f2xkkqx232hsan1f1s8k9j3q5avd"; depends=[ggplot2 polynom]; broken = true; }; + ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; broken = true; }; + MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; broken = true; }; + MoBPS = derive2 { name="MoBPS"; version="1.6.54"; sha256="1r15ag7c56bi54mby8kxb74l5v4qihdj7cr3i5vg8p5qpmvsff8m"; depends=[]; broken = true; }; + Myrrix = derive2 { name="Myrrix"; version="1.2"; sha256="05x2h4ppjhfm0wlpwyp8ycjg59qj3gv0yqdilxrzb1lkrzln92xb"; depends=[Myrrixjars rJava]; broken = true; }; + Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; broken = true; }; + N2H4 = derive2 { name="N2H4"; version="0.5.9"; sha256="09ikdnn17zx9l683k6mrc4hifxnd5d7fjxm6qdvxxbn10dh6qgvj"; depends=[dplyr httr jsonlite lubridate rvest tibble tidyr xml2]; broken = true; }; + OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; broken = true; }; + OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; broken = true; }; + RefFreeEWAS = derive2 { name="RefFreeEWAS"; version="2.2"; sha256="1aya34iz5v3xfpj86x9ab998m7fdwl138ly007mgdayacvqi4a6y"; depends=[quadprog]; broken = true; }; + artemis = derive2 { name="artemis"; version="1.1.1"; sha256="1v875xn0mvw7p7jdp6d3hpc4cp8yq2aq0b80rq1c619n9rkjq4ks"; depends=[BH ggplot2 lme4 loo Rcpp RcppEigen RcppParallel rstan rstantools StanHeaders]; broken = true; }; + csodata = derive2 { name="csodata"; version="1.2.0"; sha256="0cmg3rxyj505k4bkkg6xn832xmz5jjvr6x9qmzcyqlhf6c6vm026"; depends=[dplyr httr jsonlite lubridate R_cache reshape2 rjstat sf]; broken = true; }; + dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; broken = true; }; + dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; broken = true; }; + endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; broken = true; }; + flintyR = derive2 { name="flintyR"; version="0.0.1"; sha256="0xx5bmhvdvvarswb0s56lqa71had4bcszhafg1c47pl3d5a6gz2h"; depends=[assertthat doParallel foreach Rcpp RcppArmadillo testthat]; broken = true; }; + fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; broken = true; }; + gorica = derive2 { name="gorica"; version="0.1.1"; sha256="06022nkdqmd653bxi81ks4lq5gx3j9jxbwkx1wjmmj4ph6qabkmn"; depends=[bain lavaan limSolve lme4 MASS mvtnorm quadprog]; broken = true; }; + graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; broken = true; }; + healthforum = derive2 { name="healthforum"; version="0.1.0"; sha256="13ih00amv9hrpngm6pxc8vzqzhx8c0yqgaprxdcp5li90lg5r3av"; depends=[magrittr purrr rvest stringr tokenizers xml2]; broken = true; }; + klassR = derive2 { name="klassR"; version="0.1.5"; sha256="00cm71jcshyndvl1dr59cc01pryjymj6a8lprg8r2i8vpijjb96l"; depends=[httr jsonlite tm]; broken = true; }; + lass0 = derive2 { name="lass0"; version="1.1.0"; sha256="01fafgyhi3fw8ldjw2gf0z9w1si7il3ailwm197fxmw4wqgys9fl"; depends=[doRNG foreach ismev lpSolve]; broken = true; }; + likeLTD = derive2 { name="likeLTD"; version="6.3.0"; sha256="1mjf4667xd9pf2684d7vqaj54l5s9pgljn4vkfp32wzbfknq6y8r"; depends=[DEoptim gdata ggplot2 gtools rtf]; broken = true; }; + rdomains = derive2 { name="rdomains"; version="0.1.9"; sha256="0pfz438qiz8mqh391nlhz2q2r8830y5i0sg1ajhppj1hq2cgqqbg"; depends=[aws_alexa curl devtools glmnet httr jsonlite Matrix rlang urltools virustotal XML xml2]; broken = true; }; + rijkspalette = derive2 { name="rijkspalette"; version="1.0.2"; sha256="00726q8s36si08ghd9sgi7ikadcj11xqwhgv8f3cml6lvwz7ppzz"; depends=[crayon imager jsonlite]; broken = true; }; + rnpn = derive2 { name="rnpn"; version="1.2.1"; sha256="17l62nwcqm591hb0a9zvmsvyphxf66lwk0z918sbqkr1r9zzwm4f"; depends=[curl data_table httr jsonlite magrittr plyr raster rgdal sp tibble XML]; broken = true; }; + simLife = derive2 { name="simLife"; version="0.5.2"; sha256="1dhrjszfgxr0j4dkc2bwykyj515ji5rkb572nmnyjgkyi652j01v"; depends=[splancs]; broken = true; }; + slga = derive2 { name="slga"; version="1.2.0"; sha256="0n96vqczpzc51ln2nraxz0846amasfbm541sy0wf0dsng283mh13"; depends=[httr raster s2 sf xml2]; broken = true; }; + usethis2 = derive2 { name="usethis2"; version="0.2.0"; sha256="0ljvfgwg73y71yvyz2pp4c1rzgiqk1x7kmgswxa1ay05zwdgyi0x"; depends=[microservices purrr usethis withr]; broken = true; }; } diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 149d9c0ac9f..16cbe2c510b 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -465,6 +465,18 @@ let statmod = [ pkgs.libiconv ]; rsvg = [ pkgs.librsvg.dev ]; ssh = with pkgs; [ libssh ]; + s2 = [ pkgs.openssl.dev ]; + ArrayExpressHTS = with pkgs; [ zlib.dev curl.dev which ]; + bbl = with pkgs; [ gsl ]; + writexl = with pkgs; [ zlib.dev ]; + qpdf = with pkgs; [ libjpeg.dev zlib.dev ]; + vcfR = with pkgs; [ zlib.dev ]; + bio3d = with pkgs; [ zlib.dev ]; + arrangements = with pkgs; [ gmp.dev ]; + spp = with pkgs; [ zlib.dev ]; + Rbowtie = with pkgs; [ zlib.dev ]; + gaston = with pkgs; [ zlib.dev ]; + csaw = with pkgs; [ zlib.dev curl ]; }; packagesRequireingX = [ @@ -546,6 +558,7 @@ let "KappaGUI" "likeLTD" "logmult" + "loon" "LS2Wstat" "MareyMap" "memgene" @@ -708,15 +721,6 @@ let preConfigure = "patchShebangs configure"; }); - ggbio = old.ggbio.overrideDerivation (attrs: { - patches = [ - (pkgs.fetchpatch { - url = "https://github.com/tengfei/ggbio/commit/b04a9840cf5c0bd0514db2536f2e610bbd364727.patch"; - sha256 = "blwtObyIYo1UBWz4nlmcJ8Nyw/n0qwmJrtwFWuoUyMg="; - }) - ]; - }); - RcppArmadillo = old.RcppArmadillo.overrideDerivation (attrs: { patchPhase = "patchShebangs configure"; }); @@ -979,6 +983,20 @@ let ''; }); + sodium = old.sodium.overrideDerivation (attrs: with pkgs; { + preConfigure = '' + patchShebangs configure + ''; + nativeBuildInputs = [ pkg-config ] ++ attrs.nativeBuildInputs; + buildInputs = [ libsodium.dev ] ++ attrs.buildInputs; + }); + + Rhtslib = old.Rhtslib.overrideDerivation (attrs: { + preConfigure = '' + substituteInPlace R/zzz.R --replace "-lcurl" "-L${pkgs.curl.out}/lib -lcurl" + ''; + }); + }; in self diff --git a/pkgs/development/r-modules/generate-r-packages.R b/pkgs/development/r-modules/generate-r-packages.R index f656fdca092..8c97c651e4c 100755 --- a/pkgs/development/r-modules/generate-r-packages.R +++ b/pkgs/development/r-modules/generate-r-packages.R @@ -82,6 +82,17 @@ pkgs$sha256 <- parApply(cl, pkgs, 1, function(p) nixPrefetch(p[1], p[2])) nix <- apply(pkgs, 1, function(p) formatPackage(p[1], p[2], p[18], p[4], p[5], p[6])) write("done", stderr()) +# Mark deleted packages as broken +setkey(readFormatted, V2) +markBroken <- function(name) { + str <- paste0(readFormatted[name], collapse='"') + if(sum(grep("broken = true;", str))) + return(str) + write(paste("marked", name, "as broken"), stderr()) + gsub("};$", "broken = true; };", str) +} +broken <- lapply(setdiff(readFormatted[[2]], pkgs[[1]]), markBroken) + cat("# This file is generated from generate-r-packages.R. DO NOT EDIT.\n") cat("# Execute the following command to update the file.\n") cat("#\n") @@ -95,6 +106,7 @@ if (mirrorType == "cran") { cat("{ snapshot = \"", paste(snapshotDate), "\"; }", cat(";\n") cat("in with self; {\n") cat(paste(nix, collapse="\n"), "\n", sep="") +cat(paste(broken, collapse="\n"), "\n", sep="") cat("}\n") stopCluster(cl) diff --git a/pkgs/development/ruby-modules/bundled-common/default.nix b/pkgs/development/ruby-modules/bundled-common/default.nix index 65416d9295b..70afd412f3e 100644 --- a/pkgs/development/ruby-modules/bundled-common/default.nix +++ b/pkgs/development/ruby-modules/bundled-common/default.nix @@ -38,7 +38,7 @@ let filteredGemset = filterGemset { inherit ruby groups; } importedGemset; configuredGemset = lib.flip lib.mapAttrs filteredGemset (name: attrs: - applyGemConfigs (attrs // { inherit ruby; gemName = name; }) + applyGemConfigs (attrs // { inherit ruby document; gemName = name; }) ); hasBundler = builtins.hasAttr "bundler" filteredGemset; diff --git a/pkgs/development/tools/analysis/flow/default.nix b/pkgs/development/tools/analysis/flow/default.nix index ee4e6d733fc..4572ede0536 100644 --- a/pkgs/development/tools/analysis/flow/default.nix +++ b/pkgs/development/tools/analysis/flow/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "flow"; - version = "0.160.0"; + version = "0.160.1"; src = fetchFromGitHub { owner = "facebook"; repo = "flow"; rev = "v${version}"; - sha256 = "sha256-pgNxiNzL7Mb/ueBhWBtUi4BGnLnemk3o05K/fqXWE6Q="; + sha256 = "sha256-tIKQBJ+nlUzY3+jHlXOAMfCLVJfRXZiveSkKaDMz/hI="; }; installPhase = '' diff --git a/pkgs/development/tools/analysis/rizin/cutter.nix b/pkgs/development/tools/analysis/rizin/cutter.nix index c1d8ab99063..3082d9d4f82 100644 --- a/pkgs/development/tools/analysis/rizin/cutter.nix +++ b/pkgs/development/tools/analysis/rizin/cutter.nix @@ -11,13 +11,13 @@ mkDerivation rec { pname = "cutter"; - version = "2.0.2"; + version = "2.0.3"; src = fetchFromGitHub { owner = "rizinorg"; repo = "cutter"; rev = "v${version}"; - sha256 = "sha256-CVVUXx6wt9vH3B7NrrlRGnOIrhXQPjV7GmX3O+KtMSM="; + sha256 = "sha256-OC04d3j8Dfsob1dUjNBc1pSQFxJlexzWJ4v0V3QNkno="; fetchSubmodules = true; }; diff --git a/pkgs/development/tools/analysis/rizin/default.nix b/pkgs/development/tools/analysis/rizin/default.nix index ff7717312f8..d76c63044cc 100644 --- a/pkgs/development/tools/analysis/rizin/default.nix +++ b/pkgs/development/tools/analysis/rizin/default.nix @@ -23,11 +23,11 @@ stdenv.mkDerivation rec { pname = "rizin"; - version = "0.2.1"; + version = "0.3.0"; src = fetchurl { url = "https://github.com/rizinorg/rizin/releases/download/v${version}/rizin-src-v${version}.tar.xz"; - sha256 = "sha256-lxVsPI+qLenZ0pelvxtHlQ6fhWdQeqoEEHrUGZ5Rdmg="; + sha256 = "sha256-+XW12VIaRfRkLc3Li6ItF4VQfWLNRvxZW2VGtxVYJxY="; }; mesonFlags = [ diff --git a/pkgs/development/tools/analysis/tfsec/default.nix b/pkgs/development/tools/analysis/tfsec/default.nix index 99138a61244..2902041e51f 100644 --- a/pkgs/development/tools/analysis/tfsec/default.nix +++ b/pkgs/development/tools/analysis/tfsec/default.nix @@ -5,13 +5,13 @@ buildGoPackage rec { pname = "tfsec"; - version = "0.58.9"; + version = "0.58.11"; src = fetchFromGitHub { owner = "aquasecurity"; repo = pname; rev = "v${version}"; - sha256 = "1i61xls3jj5w3cliqs28m1y6p47yav24m40zxa6kf0jj4s50m1d3"; + sha256 = "sha256-IapWH7bkjrFmdkGHUHROECmfF3su4HtJJ8Ii5a4GSRg="; }; goPackagePath = "github.com/aquasecurity/tfsec"; diff --git a/pkgs/development/tools/build-managers/shards/default.nix b/pkgs/development/tools/build-managers/shards/default.nix index 16b2967e632..084225a8f5e 100644 --- a/pkgs/development/tools/build-managers/shards/default.nix +++ b/pkgs/development/tools/build-managers/shards/default.nix @@ -1,7 +1,6 @@ { lib , fetchFromGitHub -, crystal_0_34 -, crystal_0_36 +, crystal_1_0 }: let generic = @@ -36,18 +35,12 @@ let in rec { - # needed for anything that requires the old v1 shards format - shards_0_11 = generic { - version = "0.11.1"; - sha256 = "05qnhc23xbmicdl4fwyxfpcvd8jq4inzh6v7jsjjw4n76vzb1f71"; - crystal = crystal_0_34; - }; - shards_0_14 = generic { - version = "0.14.1"; + shards_0_15 = generic { + version = "0.15.0"; sha256 = "sha256-/C6whh5RbTBkFWqpn0GqyVe0opbrklm8xPv5MIG99VU="; - crystal = crystal_0_36; + crystal = crystal_1_0; }; - shards = shards_0_14; + shards = shards_0_15; } diff --git a/pkgs/development/tools/database/pgsync/Gemfile.lock b/pkgs/development/tools/database/pgsync/Gemfile.lock index d147a5a7454..e6cb2fb570a 100644 --- a/pkgs/development/tools/database/pgsync/Gemfile.lock +++ b/pkgs/development/tools/database/pgsync/Gemfile.lock @@ -1,14 +1,14 @@ GEM remote: https://rubygems.org/ specs: - parallel (1.20.1) + parallel (1.21.0) pg (1.2.3) - pgsync (0.6.7) + pgsync (0.6.8) parallel pg (>= 0.18.2) slop (>= 4.8.2) tty-spinner - slop (4.9.0) + slop (4.9.1) tty-cursor (0.7.1) tty-spinner (0.9.3) tty-cursor (~> 0.7) @@ -20,4 +20,4 @@ DEPENDENCIES pgsync BUNDLED WITH - 2.1.4 + 2.2.24 diff --git a/pkgs/development/tools/database/pgsync/default.nix b/pkgs/development/tools/database/pgsync/default.nix index f89b25bf0a7..7e075784f12 100644 --- a/pkgs/development/tools/database/pgsync/default.nix +++ b/pkgs/development/tools/database/pgsync/default.nix @@ -1,15 +1,16 @@ -{ lib, bundlerApp }: +{ lib, bundlerApp, bundlerUpdateScript }: bundlerApp rec { gemdir = ./.; pname = "pgsync"; exes = [ "pgsync" ]; + passthru.updateScript = bundlerUpdateScript "pgsync"; + meta = with lib; { description = "Sync data from one Postgres database to another (like `pg_dump`/`pg_restore`)"; homepage = "https://github.com/ankane/pgsync"; license = with licenses; mit; maintainers = with maintainers; [ fabianhjr ]; - platforms = platforms.all; }; } diff --git a/pkgs/development/tools/database/pgsync/gemset.nix b/pkgs/development/tools/database/pgsync/gemset.nix index 0240300ff05..cc456be8eb0 100644 --- a/pkgs/development/tools/database/pgsync/gemset.nix +++ b/pkgs/development/tools/database/pgsync/gemset.nix @@ -4,10 +4,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0055br0mibnqz0j8wvy20zry548dhkakws681bhj3ycb972awkzd"; + sha256 = "1hkfpm78c2vs1qblnva3k1grijvxh87iixcnyd83s3lxrxsjvag4"; type = "gem"; }; - version = "1.20.1"; + version = "1.21.0"; }; pg = { groups = ["default"]; @@ -25,20 +25,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0kn7cf048zwbap0mifdpzz8if1ah803vgzbx09dfgjwgvfx5w5w6"; + sha256 = "1rsm1irmz97v1kxhnq4lbwwiapqa2zkx0n0xlcf68ca8sfcfql1z"; type = "gem"; }; - version = "0.6.7"; + version = "0.6.8"; }; slop = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "09n6sj4p3b43qq6jmghr9zhgny6719bpca8j6rxnlbq9bsnrd8rj"; + sha256 = "067bvjmjdjs19bvy138hkqqvw8li3732radcd4x5f5dbf30yk3a9"; type = "gem"; }; - version = "4.9.0"; + version = "4.9.1"; }; tty-cursor = { groups = ["default"]; diff --git a/pkgs/development/tools/database/sqlfluff/default.nix b/pkgs/development/tools/database/sqlfluff/default.nix index 348111c5e4f..62bef68b506 100644 --- a/pkgs/development/tools/database/sqlfluff/default.nix +++ b/pkgs/development/tools/database/sqlfluff/default.nix @@ -5,14 +5,14 @@ python3.pkgs.buildPythonApplication rec { pname = "sqlfluff"; - version = "0.6.5"; + version = "0.6.6"; disabled = python3.pythonOlder "3.6"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "sha256-JUvwp4Ptu1URWO7wyeOCjwjGW4S0XqYZwNjCyR3H/rc="; + sha256 = "sha256-I7vsOQtXY/n2Zu0F94f5/uF1ia96R/qQw+duG7X8Dpo="; }; propagatedBuildInputs = with python3.pkgs; [ diff --git a/pkgs/development/tools/documentation/gnome-doc-utils/default.nix b/pkgs/development/tools/documentation/gnome-doc-utils/default.nix index b536dc94067..5586ed5c230 100644 --- a/pkgs/development/tools/documentation/gnome-doc-utils/default.nix +++ b/pkgs/development/tools/documentation/gnome-doc-utils/default.nix @@ -1,7 +1,7 @@ -{ lib, fetchurl, pkg-config, libxml2Python, libxslt, intltool, gnome -, python2Packages }: +{ lib, fetchurl, pkg-config, libxml2, libxslt, intltool, gnome +, python3Packages, fetchpatch, bash }: -python2Packages.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { pname = "gnome-doc-utils"; version = "0.20.10"; @@ -12,28 +12,31 @@ python2Packages.buildPythonApplication rec { sha256 = "19n4x25ndzngaciiyd8dd6s2mf9gv6nv3wv27ggns2smm7zkj1nb"; }; + patches = [ + # https://bugzilla.redhat.com/show_bug.cgi?id=438638 + (fetchpatch { + url = "https://src.fedoraproject.org/rpms/gnome-doc-utils/raw/6b8908abe5af61a952db7174c5d1843708d61f1b/f/gnome-doc-utils-0.14.0-package.patch"; + sha256 = "sha256-V2L2/30NoHY/wj3+dsombxveWRSUJb2YByOKtEgVx/0="; + }) + # python3 support + (fetchpatch { + url = "https://src.fedoraproject.org/rpms/gnome-doc-utils/raw/6b8908abe5af61a952db7174c5d1843708d61f1b/f/gnome-doc-utils-0.20.10-python3.patch"; + sha256 = "sha256-niH/Yx5H44rsRgkCZS8LWLFB9ZvuInt75zugzoVUhH0="; + }) + ]; + nativeBuildInputs = [ intltool pkg-config libxslt.dev ]; - buildInputs = [ libxslt ]; + buildInputs = [ libxml2 libxslt bash ]; + propagatedBuildInputs = [ python3Packages.libxml2 ]; configureFlags = [ "--disable-scrollkeeper" ]; - preBuild = '' - substituteInPlace xml2po/xml2po/Makefile --replace '-e "s+^#!.*python.*+#!$(PYTHON)+"' '-e "s\"^#!.*python.*\"#!$(PYTHON)\""' - ''; - - propagatedBuildInputs = [ libxml2Python ]; - passthru = { updateScript = gnome.updateScript { packageName = pname; }; }; - postFixup = '' - # Do not propagate Python - rm $out/nix-support/propagated-build-inputs - ''; - meta = with lib; { description = "Collection of documentation utilities for the GNOME project"; homepage = "https://gitlab.gnome.org/GNOME/gnome-doc-utils"; diff --git a/pkgs/development/tools/godot/default.nix b/pkgs/development/tools/godot/default.nix index 5e457227c8d..c781cb815f7 100644 --- a/pkgs/development/tools/godot/default.nix +++ b/pkgs/development/tools/godot/default.nix @@ -13,13 +13,13 @@ let }; in stdenv.mkDerivation rec { pname = "godot"; - version = "3.3.2"; + version = "3.3.3"; src = fetchFromGitHub { owner = "godotengine"; repo = "godot"; rev = "${version}-stable"; - sha256 = "0rfm6sbbwzvsn76a8aqagd7cqdzmk8qxphgl89k7y982l9a5sz50"; + sha256 = "0bkng0iwsfawxk8bxlq01ib4n6kaxjkbwcif1bhpvw5ra19430rg"; }; nativeBuildInputs = [ pkg-config ]; diff --git a/pkgs/development/tools/heroku/default.nix b/pkgs/development/tools/heroku/default.nix index 18a031cd23b..205cf4e33db 100644 --- a/pkgs/development/tools/heroku/default.nix +++ b/pkgs/development/tools/heroku/default.nix @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { meta = { homepage = "https://devcenter.heroku.com/articles/heroku-cli"; description = "Everything you need to get started using Heroku"; - maintainers = with lib.maintainers; [ aflatter mirdhyn peterhoeg marsam ]; + maintainers = with lib.maintainers; [ aflatter mirdhyn marsam ]; license = lib.licenses.mit; platforms = with lib.platforms; unix; }; diff --git a/pkgs/development/tools/just/default.nix b/pkgs/development/tools/just/default.nix index 9e852793ab7..8306092c531 100644 --- a/pkgs/development/tools/just/default.nix +++ b/pkgs/development/tools/just/default.nix @@ -2,15 +2,15 @@ rustPlatform.buildRustPackage rec { pname = "just"; - version = "0.10.1"; + version = "0.10.2"; src = fetchFromGitHub { owner = "casey"; repo = pname; rev = version; - sha256 = "sha256-KC/m+I4uOBS0bJb5yvxSkj+1Jlq+bekLTqHlz4vqv8I="; + sha256 = "sha256-AR1bNsyex+kfXdiSF3QgeqK8qwIssLfaaY0qNhnp7ak="; }; - cargoSha256 = "sha256-et7V7orw2msv30nJ9sntzEQoeN1YqhHMnHOUt4a6e2I="; + cargoSha256 = "sha256-Ukhp8mPXD/dDolfSugOCVwRMgkjmDRCoNzthgqrN6p0="; nativeBuildInputs = [ installShellFiles ]; buildInputs = lib.optionals stdenv.isDarwin [ libiconv ]; diff --git a/pkgs/development/tools/misc/bashdb/default.nix b/pkgs/development/tools/misc/bashdb/default.nix index 72ec8c96be3..918dd90aa83 100644 --- a/pkgs/development/tools/misc/bashdb/default.nix +++ b/pkgs/development/tools/misc/bashdb/default.nix @@ -1,14 +1,30 @@ -{ lib, stdenv, fetchurl, makeWrapper, python3Packages }: +{ lib +, stdenv +, fetchurl +, fetchpatch +, makeWrapper +, python3Packages +}: stdenv.mkDerivation rec { pname = "bashdb"; - version = "4.4-1.0.0"; + version = "5.0-1.1.2"; src = fetchurl { url = "mirror://sourceforge/bashdb/${pname}-${version}.tar.bz2"; - sha256 = "0p7i7bpzs6q1i7swnkr89kxqgzr146xw8d2acmqwqbslzm9dqlml"; + sha256 = "sha256-MBdtKtKMWwCy4tIcXqGu+PuvQKj52fcjxnxgUx87czA="; }; + patches = [ + # Enable building with bash 5.1/5.2 + # Remove with any upstream 5.1-x.y.z release + (fetchpatch { + url = "https://raw.githubusercontent.com/freebsd/freebsd-ports/569fbb806d9ee813afa8b27d2098a44f93433922/devel/bashdb/files/patch-configure"; + sha256 = "19zfzcnxavndyn6kfxp775kjcd0gigsm4y3bnh6fz5ilhnnbbbgr"; + }) + ]; + patchFlags = "-p0"; + nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/development/tools/misc/ccache/default.nix b/pkgs/development/tools/misc/ccache/default.nix index a6fbacfa6f1..357a46c081c 100644 --- a/pkgs/development/tools/misc/ccache/default.nix +++ b/pkgs/development/tools/misc/ccache/default.nix @@ -1,7 +1,6 @@ { lib , stdenv , fetchFromGitHub -, fetchpatch , substituteAll , binutils , asciidoctor @@ -15,25 +14,18 @@ let ccache = stdenv.mkDerivation rec { pname = "ccache"; - version = "4.4.1"; + version = "4.4.2"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - hash = "sha256-zsJoaaxYVV78vsxq2nbOh9ZAU1giKp8Kh6qJFL120CQ="; + hash = "sha256-VtwykRX5so6LqyC0En/Jx7anXD7qW47zqq3awCY0lJE="; }; outputs = [ "out" "man" ]; patches = [ - # Use the shell builtin pwd for the basedir test - # See https://github.com/ccache/ccache/pull/933 - (fetchpatch { - url = "https://github.com/ccache/ccache/commit/58fd1fbe75a1b5dc3f9151947ace15164fdef91c.patch"; - sha256 = "BoBn4YSDy8pQxJ+fQHSsrUZDBVeLFWXIQ6CunDwMO7o="; - }) - # When building for Darwin, test/run uses dwarfdump, whereas on # Linux it uses objdump. We don't have dwarfdump packaged for # Darwin, so this patch updates the test to also use objdump on diff --git a/pkgs/development/tools/misc/terraformer/default.nix b/pkgs/development/tools/misc/terraformer/default.nix index a6dd19bf458..adc89609c4a 100644 --- a/pkgs/development/tools/misc/terraformer/default.nix +++ b/pkgs/development/tools/misc/terraformer/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "terraformer"; - version = "0.8.16"; + version = "0.8.17"; src = fetchFromGitHub { owner = "GoogleCloudPlatform"; repo = pname; rev = version; - sha256 = "sha256-W2Lt24wYYVLaQBtljWrReTZyHj6b9SPHKBdxaMJYUcU="; + sha256 = "sha256-E71I2fRGg8HTa9vFMQqjIxtqoR0J4Puz2AmlyZMhye8="; }; - vendorSha256 = "sha256-bJbPshTB5VOyyhY2iMVe1GLedRFbWBL4Q5eKLBsVrTA="; + vendorSha256 = "sha256-x5wyje27029BZMk17sIHzd68Nlh5ifLn+YXv4hPs04Q="; subPackages = [ "." ]; diff --git a/pkgs/development/tools/misc/texinfo/6.8.nix b/pkgs/development/tools/misc/texinfo/6.8.nix new file mode 100644 index 00000000000..11435bf329f --- /dev/null +++ b/pkgs/development/tools/misc/texinfo/6.8.nix @@ -0,0 +1,4 @@ +import ./common.nix { + version = "6.8"; + sha256 = "1i7yb7mrp3inz25zbzv2pllr4y7d58v818f1as7iz8mw53nm7dwf"; +} diff --git a/pkgs/development/tools/misc/texinfo/common.nix b/pkgs/development/tools/misc/texinfo/common.nix index 1c5de083bc0..d6e6bced405 100644 --- a/pkgs/development/tools/misc/texinfo/common.nix +++ b/pkgs/development/tools/misc/texinfo/common.nix @@ -54,6 +54,12 @@ stdenv.mkDerivation { && !stdenv.isDarwin && !stdenv.isSunOS; # flaky + checkFlagsArray = if version == "6.8" then [ + # Test is known to fail on various locales on texinfo-6.8: + # https://lists.gnu.org/r/bug-texinfo/2021-07/msg00012.html + "XFAIL_TESTS=test_scripts/layout_formatting_fr_icons.sh" + ] else null; + meta = { homepage = "https://www.gnu.org/software/texinfo/"; description = "The GNU documentation system"; diff --git a/pkgs/development/tools/packer/default.nix b/pkgs/development/tools/packer/default.nix index 7b86f8da10e..b7e88fb1884 100644 --- a/pkgs/development/tools/packer/default.nix +++ b/pkgs/development/tools/packer/default.nix @@ -1,17 +1,25 @@ -{ lib, buildGoModule, fetchFromGitHub, installShellFiles }: +{ lib, buildGoModule, fetchFromGitHub, installShellFiles, fetchpatch }: buildGoModule rec { pname = "packer"; - version = "1.7.4"; + version = "1.7.5"; src = fetchFromGitHub { owner = "hashicorp"; repo = "packer"; rev = "v${version}"; - sha256 = "sha256-VNOq9uhtzf1hdEn+bkAOYy4gZxP5ek0WaaS/71uJzrA="; + sha256 = "15kw4zy0p7hr6jm0202s0fk5ja3ff0pdir37qdifngm1x7id1vxc"; }; - vendorSha256 = "sha256-WYA/wZJg93+X4IAX9hOMRHVRQRyA4N4aDaScDgkGUIE="; + vendorSha256 = "1785yv48sn504zcig9szjw9s4dxb55dg9idh10i2gzfgbda2c3nf"; + + patches = [ + # https://github.com/hashicorp/packer/pull/11282 + (fetchpatch { + url = "https://github.com/hashicorp/packer/commit/dbf13803217e18c6cb567ffefc9476c4e0149e02.patch"; + sha256 = "1n038x6qnr75c5ci2jp8jcwp6yvlchcf2nydksb2s75ffvidjrsa"; + }) + ]; subPackages = [ "." ]; @@ -28,6 +36,7 @@ buildGoModule rec { homepage = "https://www.packer.io"; license = licenses.mpl20; maintainers = with maintainers; [ cstrahan zimbatm ma27 ]; + changelog = "https://github.com/hashicorp/packer/blob/v${version}/CHANGELOG.md"; platforms = platforms.unix; }; } diff --git a/pkgs/development/tools/parsing/tree-sitter/grammars/default.nix b/pkgs/development/tools/parsing/tree-sitter/grammars/default.nix index 01108d1501a..fa8ee6f4992 100644 --- a/pkgs/development/tools/parsing/tree-sitter/grammars/default.nix +++ b/pkgs/development/tools/parsing/tree-sitter/grammars/default.nix @@ -26,6 +26,7 @@ tree-sitter-lua = (builtins.fromJSON (builtins.readFile ./tree-sitter-lua.json)); tree-sitter-markdown = (builtins.fromJSON (builtins.readFile ./tree-sitter-markdown.json)); tree-sitter-nix = (builtins.fromJSON (builtins.readFile ./tree-sitter-nix.json)); + tree-sitter-norg = (builtins.fromJSON (builtins.readFile ./tree-sitter-norg.json)); tree-sitter-ocaml = (builtins.fromJSON (builtins.readFile ./tree-sitter-ocaml.json)); tree-sitter-php = (builtins.fromJSON (builtins.readFile ./tree-sitter-php.json)); tree-sitter-python = (builtins.fromJSON (builtins.readFile ./tree-sitter-python.json)); diff --git a/pkgs/development/tools/parsing/tree-sitter/grammars/tree-sitter-norg.json b/pkgs/development/tools/parsing/tree-sitter/grammars/tree-sitter-norg.json new file mode 100644 index 00000000000..f5a2194b25f --- /dev/null +++ b/pkgs/development/tools/parsing/tree-sitter/grammars/tree-sitter-norg.json @@ -0,0 +1,10 @@ +{ + "url": "https://github.com/nvim-neorg/tree-sitter-norg.git", + "rev": "84949f0c05195907c416cb7d02cf1369b9458b5f", + "date": "2021-09-25T17:47:36+00:00", + "path": "/nix/store/wa653ml1ajl8923f4am505asxwvsxbzq-tree-sitter-norg", + "sha256": "07pzz9acg01r4yyws6savprjn3pccyylx6vq8q9lvrp76pnflks4", + "fetchSubmodules": false, + "deepClone": false, + "leaveDotGit": false +} diff --git a/pkgs/development/tools/parsing/tree-sitter/update.nix b/pkgs/development/tools/parsing/tree-sitter/update.nix index c6e819465a5..4f1e69a585f 100644 --- a/pkgs/development/tools/parsing/tree-sitter/update.nix +++ b/pkgs/development/tools/parsing/tree-sitter/update.nix @@ -138,6 +138,10 @@ let orga = "rydesun"; repo = "tree-sitter-dot"; }; + "tree-sitter-norg" = { + orga = "nvim-neorg"; + repo = "tree-sitter-norg"; + }; }; allGrammars = diff --git a/pkgs/development/tools/protoc-gen-doc/default.nix b/pkgs/development/tools/protoc-gen-doc/default.nix index 1a1991be949..4774d1a11d5 100644 --- a/pkgs/development/tools/protoc-gen-doc/default.nix +++ b/pkgs/development/tools/protoc-gen-doc/default.nix @@ -1,17 +1,17 @@ { buildGoModule, fetchFromGitHub, lib }: -buildGoModule { +buildGoModule rec { pname = "protoc-gen-doc-unstable"; - version = "2019-04-22"; + version = "1.5.0"; src = fetchFromGitHub { owner = "pseudomuto"; repo = "protoc-gen-doc"; - rev = "f824a8908ce33f213b2dba1bf7be83384c5c51e8"; - sha256 = "004axh2gqc4f115mdxxg59d19hph3rr0bq9d08n3nyl315f590kj"; + rev = "v${version}"; + sha256 = "1bpb5wv76p0sjffh5d1frbygp3q1p07sdh5c8pznl5bdh5pd7zxq"; }; - vendorSha256 = "17qdpsff8jk7ks5v6ix1rb966x3yvq03vk5bs2zbnxfdra7bv3n6"; + vendorSha256 = "08pk9nxsl28dw3qmrlb7vsm8xbdzmx98qwkxgg93ykrhzx235k1b"; doCheck = false; diff --git a/pkgs/development/tools/quilt/default.nix b/pkgs/development/tools/quilt/default.nix index 8dafe88005d..eb7fa448815 100644 --- a/pkgs/development/tools/quilt/default.nix +++ b/pkgs/development/tools/quilt/default.nix @@ -1,4 +1,19 @@ -{ lib, stdenv, fetchurl, makeWrapper, bash, perl, diffstat, diffutils, patch, findutils }: +{ lib +, stdenv +, fetchurl +, makeWrapper +, bash +, coreutils +, diffstat +, diffutils +, findutils +, gawk +, gnugrep +, gnused +, patch +, perl +, unixtools +}: stdenv.mkDerivation rec { @@ -11,14 +26,27 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ makeWrapper ]; - buildInputs = [ perl bash diffutils patch findutils diffstat ]; + + buildInputs = [ + bash + coreutils + diffstat + diffutils + findutils + gawk + gnugrep + gnused + patch + perl + unixtools.column + unixtools.getopt + ]; postInstall = '' - wrapProgram $out/bin/quilt --prefix PATH : \ - ${perl}/bin:${bash}/bin:${diffstat}/bin:${diffutils}/bin:${findutils}/bin:${patch}/bin + wrapProgram $out/bin/quilt --prefix PATH : ${lib.makeBinPath buildInputs} ''; - meta = { + meta = with lib; { homepage = "https://savannah.nongnu.org/projects/quilt"; description = "Easily manage large numbers of patches"; @@ -29,8 +57,9 @@ stdenv.mkDerivation rec { and more. ''; - license = lib.licenses.gpl2Plus; - platforms = lib.platforms.all; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ smancill ]; + platforms = platforms.all; }; } diff --git a/pkgs/development/tools/rust/cargo-feature/default.nix b/pkgs/development/tools/rust/cargo-feature/default.nix index 062cb9f027d..0f21e4326f3 100644 --- a/pkgs/development/tools/rust/cargo-feature/default.nix +++ b/pkgs/development/tools/rust/cargo-feature/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "cargo-feature"; - version = "0.5.2"; + version = "0.5.3"; src = fetchFromGitHub { owner = "Riey"; repo = pname; rev = "v${version}"; - sha256 = "0n5kzh756ghfs3cydlcn9mfvpgwy1cjg41h0nd9dbi5cr1fp9x1n"; + sha256 = "sha256-aUzmD5Dt0obXWDdZT6/Bzun2R1TLQYYELrN4xEG4hq8="; }; - cargoSha256 = "1jh1h6v4mxx03b4diw9325ga0k3js0czs504lx07hvbx8yai1wkq"; + cargoSha256 = "sha256-R8OaxlBAkK5YQPejOdLuCMeQlCbPcC/VQm9WHm31v54="; buildInputs = lib.optional stdenv.isDarwin libiconv; diff --git a/pkgs/development/tools/rust/roogle/default.nix b/pkgs/development/tools/rust/roogle/default.nix new file mode 100644 index 00000000000..7def38d1991 --- /dev/null +++ b/pkgs/development/tools/rust/roogle/default.nix @@ -0,0 +1,27 @@ +{ lib, rustPlatform, fetchFromGitHub }: + +rustPlatform.buildRustPackage rec { + pname = "roogle"; + version = "0.1.4"; + + src = fetchFromGitHub { + owner = "hkmatsumoto"; + repo = pname; + rev = version; + sha256 = "1h0agialbvhhiijkdnr47y7babq432limdl6ag2rmjfs7yishn4r"; + }; + + cargoSha256 = "sha256-CzFfFKTmBUAafk8PkkWmUkRIyO+yEhmCfN1zsLRq4Iw="; + + postInstall = '' + mkdir -p $out/share/roogle + cp -r assets $out/share/roogle + ''; + + meta = with lib; { + description = "A Rust API search engine which allows you to search functions by names and type signatures"; + homepage = "https://github.com/hkmatsumoto/roogle"; + license = with licenses; [ mit /* or */ asl20 ]; + maintainers = with maintainers; [ figsoda ]; + }; +} diff --git a/pkgs/development/tools/selenium/chromedriver/default.nix b/pkgs/development/tools/selenium/chromedriver/default.nix index d777d788aec..4df279f7313 100644 --- a/pkgs/development/tools/selenium/chromedriver/default.nix +++ b/pkgs/development/tools/selenium/chromedriver/default.nix @@ -1,7 +1,8 @@ { lib, stdenv, fetchurl, unzip, makeWrapper , cairo, fontconfig, freetype, gdk-pixbuf, glib , glibc, gtk2, libX11, nspr, nss, pango, gconf -, libxcb, libXi, libXrender, libXext +, libxcb, libXi, libXrender, libXext, dbus +, testVersion, chromedriver }: let @@ -27,6 +28,7 @@ let gdk-pixbuf glib gtk2 gconf libX11 nspr nss pango libXrender gconf libxcb libXext libXi + dbus ]; in stdenv.mkDerivation rec { @@ -46,9 +48,11 @@ in stdenv.mkDerivation rec { install -m755 -D chromedriver $out/bin/chromedriver '' + lib.optionalString (!stdenv.isDarwin) '' patchelf --set-interpreter ${glibc.out}/lib/ld-linux-x86-64.so.2 $out/bin/chromedriver - wrapProgram "$out/bin/chromedriver" --prefix LD_LIBRARY_PATH : "${libs}:\$LD_LIBRARY_PATH" + wrapProgram "$out/bin/chromedriver" --prefix LD_LIBRARY_PATH : "${libs}" ''; + passthru.tests.version = testVersion { package = chromedriver; }; + meta = with lib; { homepage = "https://chromedriver.chromium.org/"; description = "A WebDriver server for running Selenium tests on Chrome"; diff --git a/pkgs/development/tools/sigrok-cli/default.nix b/pkgs/development/tools/sigrok-cli/default.nix index 7935d10effc..b1ba0402a3e 100644 --- a/pkgs/development/tools/sigrok-cli/default.nix +++ b/pkgs/development/tools/sigrok-cli/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "sigrok-cli"; - version = "0.7.1"; + version = "0.7.2"; src = fetchurl { url = "https://sigrok.org/download/source/${pname}/${pname}-${version}.tar.gz"; - sha256 = "15vpn1psriadcbl6v9swwgws7dva85ld03yv6g1mgm27kx11697m"; + sha256 = "sha256-cdBEPzaJe/Vlcy3sIGgw2+oPJ4m2YBzxBTayhtEUCrg="; }; nativeBuildInputs = [ pkg-config ]; diff --git a/pkgs/development/tools/simavr/default.nix b/pkgs/development/tools/simavr/default.nix index 1d47b325101..b7490d4108d 100644 --- a/pkgs/development/tools/simavr/default.nix +++ b/pkgs/development/tools/simavr/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "simavr"; - version = "1.5"; + version = "1.7"; src = fetchFromGitHub { owner = "buserror"; repo = "simavr"; - rev = "e0d4de41a72520491a4076b3ed87beb997a395c0"; - sha256 = "0b2lh6l2niv80dmbm9xkamvnivkbmqw6v97sy29afalrwfxylxla"; + rev = "v${version}"; + sha256 = "0njz03lkw5374x1lxrq08irz4b86lzj2hibx46ssp7zv712pq55q"; }; makeFlags = [ diff --git a/pkgs/development/tools/sumneko-lua-language-server/default.nix b/pkgs/development/tools/sumneko-lua-language-server/default.nix index 9b0bba533f5..1f2553e32f3 100644 --- a/pkgs/development/tools/sumneko-lua-language-server/default.nix +++ b/pkgs/development/tools/sumneko-lua-language-server/default.nix @@ -59,5 +59,6 @@ stdenv.mkDerivation rec { license = licenses.mit; maintainers = with maintainers; [ mjlbach ]; platforms = platforms.linux; + mainProgram = "lua-language-server"; }; } diff --git a/pkgs/development/tools/taplo-cli/default.nix b/pkgs/development/tools/taplo-cli/default.nix index 4ad539e709a..e35613d6591 100644 --- a/pkgs/development/tools/taplo-cli/default.nix +++ b/pkgs/development/tools/taplo-cli/default.nix @@ -2,14 +2,14 @@ rustPlatform.buildRustPackage rec { pname = "taplo-cli"; - version = "0.4.0"; + version = "0.4.1"; src = fetchCrate { inherit pname version; - sha256 = "0hh9l83z7qymakyf7ka756gwxpzirgdhf6kpzh89bcmpdfz70005"; + sha256 = "sha256-bGQLAANVahpiiiKKJPNmtr4uT5iKHqyLS5yVm+rSHPg="; }; - cargoSha256 = "0bkpcnbrrfv07czs1gy8r9q1cp6fdfz2vmlfk9lsg3iapvyi5s1c"; + cargoSha256 = "sha256-T3fbG5HKOG90kawjQK8D0PIonB6ErNfR3hVIZ5N8zgA="; nativeBuildInputs = lib.optional stdenv.isLinux pkg-config; diff --git a/pkgs/development/tools/taplo-lsp/default.nix b/pkgs/development/tools/taplo-lsp/default.nix index caa7facc0b5..07fcfaec933 100644 --- a/pkgs/development/tools/taplo-lsp/default.nix +++ b/pkgs/development/tools/taplo-lsp/default.nix @@ -2,14 +2,14 @@ rustPlatform.buildRustPackage rec { pname = "taplo-lsp"; - version = "0.2.5"; + version = "0.2.6"; src = fetchCrate { inherit pname version; - sha256 = "0a8y2fdkflc7lq0q40j7dr80hbj56bbsc585isbd7lk6xavg7cvi"; + sha256 = "sha256-jd4l9iTCeHnUa/GC13paD3zDiCZBk9VgEbCDsOs/Xq4="; }; - cargoSha256 = "133p5kmcfq5ksrri2f8jvnc1ljmsczq49gh3k0gmgby45yvy6xa1"; + cargoSha256 = "sha256-zQ303JFqnbulkWL4t5+fRWijaY9zd9tLKvrvdUEvKpY="; # excludes test_tcp since it fails cargoTestFlags = [ "test_stdio" ]; diff --git a/pkgs/development/tools/yarn2nix-moretea/yarn2nix/lib/generateNix.js b/pkgs/development/tools/yarn2nix-moretea/yarn2nix/lib/generateNix.js index b82372fd5b6..407a602dc5a 100644 --- a/pkgs/development/tools/yarn2nix-moretea/yarn2nix/lib/generateNix.js +++ b/pkgs/development/tools/yarn2nix-moretea/yarn2nix/lib/generateNix.js @@ -33,7 +33,7 @@ const { execFileSync } = require('child_process') function prefetchgit(url, rev) { return JSON.parse( - execFileSync("nix-prefetch-git", ["--rev", rev, url], { + execFileSync("nix-prefetch-git", ["--rev", rev, url, "--fetch-submodules"], { stdio: [ "ignore", "pipe", "ignore" ], timeout: 60000, }) diff --git a/pkgs/development/web/deno/default.nix b/pkgs/development/web/deno/default.nix index 83a49cceda5..5a218f908e4 100644 --- a/pkgs/development/web/deno/default.nix +++ b/pkgs/development/web/deno/default.nix @@ -17,15 +17,15 @@ rustPlatform.buildRustPackage rec { pname = "deno"; - version = "1.14.1"; + version = "1.14.2"; src = fetchFromGitHub { owner = "denoland"; repo = pname; rev = "v${version}"; - sha256 = "sha256-WTBurNXI+t8S0f2ER6zw+6SlkzKYLDGFQcEVbXSQAtc="; + sha256 = "sha256-7FcGwmJKKOmpuCJgHl65+EnwOWQAbmq6X1lZMhTlDaE="; }; - cargoSha256 = "sha256-/ohAzcfsoarPicinsZf5fi2cQwYD1oW5TOdWP8RbXos="; + cargoSha256 = "sha256-mPxPieatGuROIwLGuQHBrZ8VTGd8c/6bKA+tt3Iv3OI="; # Install completions post-install nativeBuildInputs = [ installShellFiles ]; diff --git a/pkgs/development/web/deno/librusty_v8.nix b/pkgs/development/web/deno/librusty_v8.nix index ed2bca5d9ba..d7b16d6a59b 100644 --- a/pkgs/development/web/deno/librusty_v8.nix +++ b/pkgs/development/web/deno/librusty_v8.nix @@ -11,11 +11,11 @@ let }; in fetch_librusty_v8 { - version = "0.28.0"; + version = "0.30.0"; shas = { - x86_64-linux = "sha256-Kz2sAAUux1BcrU2vukGybSs+REAIRUWMxqZakRPEeic="; - aarch64-linux = "sha256-QXj9y6NrvxU6oL9QO2dYH4Fz+MbTzON7w8sTCei7Mqs="; - x86_64-darwin = "sha256-zW1g3DZ4Mh4j3UYE312dDkbX6ngg50GaKCHYPa6H0Dk="; - aarch64-darwin = "sha256-hLIRxApjTbkfDVPhK3EC7X/p6uQK5kOEILZfAmFV5AA="; + x86_64-linux = "sha256-p5Vbt2fQPFR9SfLJ03f62/a8o9QIJOTXbA1s2liwNXY="; + aarch64-linux = "sha256-j12KjdnL19d5U/QRfB/7ahUzcYnUddItp29bLM/mWzs="; + x86_64-darwin = "sha256-w3k9oj+mP+i/hSf+ZjYLF+zsAcyLezbxhWXYoaPpn+U="; + aarch64-darwin = "sha256-bOtZoG8vXnSBNTPJDkyW0xbMEbmGNtq+mEPKoP78Yew="; }; } diff --git a/pkgs/development/web/nodejs/v14.nix b/pkgs/development/web/nodejs/v14.nix index 1ec04407f89..cb8d8aac363 100644 --- a/pkgs/development/web/nodejs/v14.nix +++ b/pkgs/development/web/nodejs/v14.nix @@ -7,7 +7,7 @@ let in buildNodejs { inherit enableNpm; - version = "14.17.6"; - sha256 = "0pmd0haav2ychhcsw44klx6wfn8c7j1rsw08rc8hcm5i3h5wsn7l"; + version = "14.18.0"; + sha256 = "0naqv0aglsqy51pyiz42xz7wx5pfsbyscpdl8rir6kmfl1c52j3b"; patches = lib.optional stdenv.isDarwin ./bypass-xcodebuild.diff; } diff --git a/pkgs/misc/emulators/desmume/01_use_system_tinyxml.patch b/pkgs/misc/emulators/desmume/01_use_system_tinyxml.patch deleted file mode 100644 index 8cec26026e7..00000000000 --- a/pkgs/misc/emulators/desmume/01_use_system_tinyxml.patch +++ /dev/null @@ -1,231 +0,0 @@ -From: Evgeni Golov <evgeni@debian.org> -Subject: use the system tinyxml instead of the embedded copy -Last-Update: 2015-08-09 - -diff --git a/src/Makefile.am b/src/Makefile.am -index 7b9e263..bc7ba8c 100644 ---- a/src/Makefile.am -+++ b/src/Makefile.am -@@ -81,12 +81,6 @@ libdesmume_a_SOURCES = \ - utils/libfat/mem_allocate.h \ - utils/libfat/partition.cpp \ - utils/libfat/partition.h \ -- utils/tinyxml/tinystr.cpp \ -- utils/tinyxml/tinystr.h \ -- utils/tinyxml/tinyxml.cpp \ -- utils/tinyxml/tinyxml.h \ -- utils/tinyxml/tinyxmlerror.cpp \ -- utils/tinyxml/tinyxmlparser.cpp \ - utils/glcorearb.h \ - addons/slot2_auto.cpp addons/slot2_mpcf.cpp addons/slot2_paddle.cpp addons/slot2_gbagame.cpp addons/slot2_none.cpp addons/slot2_rumblepak.cpp addons/slot2_guitarGrip.cpp addons/slot2_expMemory.cpp addons/slot2_piano.cpp addons/slot2_passme.cpp addons/slot1_none.cpp addons/slot1_r4.cpp addons/slot1_retail_nand.cpp addons/slot1_retail_auto.cpp addons/slot1_retail_mcrom.cpp addons/slot1_retail_mcrom_debug.cpp addons/slot1comp_mc.cpp addons/slot1comp_mc.h addons/slot1comp_rom.h addons/slot1comp_rom.cpp addons/slot1comp_protocol.h addons/slot1comp_protocol.cpp \ - cheatSystem.cpp cheatSystem.h \ -@@ -204,3 +198,4 @@ if HAVE_GDB_STUB - libdesmume_a_SOURCES += gdbstub.h - endif - libdesmume_a_LIBADD = fs-$(desmume_arch).$(OBJEXT) -+LIBS += -ltinyxml -diff --git a/src/Makefile.in b/src/Makefile.in -index 9cf26a3..d9ff7b2 100644 ---- a/src/Makefile.in -+++ b/src/Makefile.in -@@ -184,9 +184,6 @@ am__libdesmume_a_SOURCES_DIST = armcpu.cpp armcpu.h \ - utils/libfat/libfat_public_api.h utils/libfat/lock.cpp \ - utils/libfat/lock.h utils/libfat/mem_allocate.h \ - utils/libfat/partition.cpp utils/libfat/partition.h \ -- utils/tinyxml/tinystr.cpp utils/tinyxml/tinystr.h \ -- utils/tinyxml/tinyxml.cpp utils/tinyxml/tinyxml.h \ -- utils/tinyxml/tinyxmlerror.cpp utils/tinyxml/tinyxmlparser.cpp \ - utils/glcorearb.h addons/slot2_auto.cpp addons/slot2_mpcf.cpp \ - addons/slot2_paddle.cpp addons/slot2_gbagame.cpp \ - addons/slot2_none.cpp addons/slot2_rumblepak.cpp \ -@@ -324,10 +321,6 @@ am_libdesmume_a_OBJECTS = armcpu.$(OBJEXT) arm_instructions.$(OBJEXT) \ - utils/libfat/libfat.$(OBJEXT) \ - utils/libfat/libfat_public_api.$(OBJEXT) \ - utils/libfat/lock.$(OBJEXT) utils/libfat/partition.$(OBJEXT) \ -- utils/tinyxml/tinystr.$(OBJEXT) \ -- utils/tinyxml/tinyxml.$(OBJEXT) \ -- utils/tinyxml/tinyxmlerror.$(OBJEXT) \ -- utils/tinyxml/tinyxmlparser.$(OBJEXT) \ - addons/slot2_auto.$(OBJEXT) addons/slot2_mpcf.$(OBJEXT) \ - addons/slot2_paddle.$(OBJEXT) addons/slot2_gbagame.$(OBJEXT) \ - addons/slot2_none.$(OBJEXT) addons/slot2_rumblepak.$(OBJEXT) \ -@@ -475,7 +468,7 @@ LIBAGG_LIBS = @LIBAGG_LIBS@ - LIBGLADE_CFLAGS = @LIBGLADE_CFLAGS@ - LIBGLADE_LIBS = @LIBGLADE_LIBS@ - LIBOBJS = @LIBOBJS@ --LIBS = @LIBS@ -+LIBS = @LIBS@ -ltinyxml - LIBSOUNDTOUCH_CFLAGS = @LIBSOUNDTOUCH_CFLAGS@ - LIBSOUNDTOUCH_LIBS = @LIBSOUNDTOUCH_LIBS@ - LTLIBOBJS = @LTLIBOBJS@ -@@ -625,9 +618,6 @@ libdesmume_a_SOURCES = armcpu.cpp armcpu.h arm_instructions.cpp \ - utils/libfat/libfat_public_api.h utils/libfat/lock.cpp \ - utils/libfat/lock.h utils/libfat/mem_allocate.h \ - utils/libfat/partition.cpp utils/libfat/partition.h \ -- utils/tinyxml/tinystr.cpp utils/tinyxml/tinystr.h \ -- utils/tinyxml/tinyxml.cpp utils/tinyxml/tinyxml.h \ -- utils/tinyxml/tinyxmlerror.cpp utils/tinyxml/tinyxmlparser.cpp \ - utils/glcorearb.h addons/slot2_auto.cpp addons/slot2_mpcf.cpp \ - addons/slot2_paddle.cpp addons/slot2_gbagame.cpp \ - addons/slot2_none.cpp addons/slot2_rumblepak.cpp \ -@@ -760,20 +750,6 @@ utils/libfat/lock.$(OBJEXT): utils/libfat/$(am__dirstamp) \ - utils/libfat/$(DEPDIR)/$(am__dirstamp) - utils/libfat/partition.$(OBJEXT): utils/libfat/$(am__dirstamp) \ - utils/libfat/$(DEPDIR)/$(am__dirstamp) --utils/tinyxml/$(am__dirstamp): -- @$(MKDIR_P) utils/tinyxml -- @: > utils/tinyxml/$(am__dirstamp) --utils/tinyxml/$(DEPDIR)/$(am__dirstamp): -- @$(MKDIR_P) utils/tinyxml/$(DEPDIR) -- @: > utils/tinyxml/$(DEPDIR)/$(am__dirstamp) --utils/tinyxml/tinystr.$(OBJEXT): utils/tinyxml/$(am__dirstamp) \ -- utils/tinyxml/$(DEPDIR)/$(am__dirstamp) --utils/tinyxml/tinyxml.$(OBJEXT): utils/tinyxml/$(am__dirstamp) \ -- utils/tinyxml/$(DEPDIR)/$(am__dirstamp) --utils/tinyxml/tinyxmlerror.$(OBJEXT): utils/tinyxml/$(am__dirstamp) \ -- utils/tinyxml/$(DEPDIR)/$(am__dirstamp) --utils/tinyxml/tinyxmlparser.$(OBJEXT): utils/tinyxml/$(am__dirstamp) \ -- utils/tinyxml/$(DEPDIR)/$(am__dirstamp) - addons/$(am__dirstamp): - @$(MKDIR_P) addons - @: > addons/$(am__dirstamp) -@@ -1035,10 +1011,6 @@ mostlyclean-compile: - -rm -f utils/libfat/partition.$(OBJEXT) - -rm -f utils/md5.$(OBJEXT) - -rm -f utils/task.$(OBJEXT) -- -rm -f utils/tinyxml/tinystr.$(OBJEXT) -- -rm -f utils/tinyxml/tinyxml.$(OBJEXT) -- -rm -f utils/tinyxml/tinyxmlerror.$(OBJEXT) -- -rm -f utils/tinyxml/tinyxmlparser.$(OBJEXT) - -rm -f utils/vfat.$(OBJEXT) - -rm -f utils/xstring.$(OBJEXT) - -@@ -1175,10 +1147,6 @@ distclean-compile: - @AMDEP_TRUE@@am__include@ @am__quote@utils/libfat/$(DEPDIR)/libfat_public_api.Po@am__quote@ - @AMDEP_TRUE@@am__include@ @am__quote@utils/libfat/$(DEPDIR)/lock.Po@am__quote@ - @AMDEP_TRUE@@am__include@ @am__quote@utils/libfat/$(DEPDIR)/partition.Po@am__quote@ --@AMDEP_TRUE@@am__include@ @am__quote@utils/tinyxml/$(DEPDIR)/tinystr.Po@am__quote@ --@AMDEP_TRUE@@am__include@ @am__quote@utils/tinyxml/$(DEPDIR)/tinyxml.Po@am__quote@ --@AMDEP_TRUE@@am__include@ @am__quote@utils/tinyxml/$(DEPDIR)/tinyxmlerror.Po@am__quote@ --@AMDEP_TRUE@@am__include@ @am__quote@utils/tinyxml/$(DEPDIR)/tinyxmlparser.Po@am__quote@ - - .c.o: - @am__fastdepCC_TRUE@ depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.o$$||'`;\ -@@ -1449,8 +1417,6 @@ distclean-generic: - -rm -f utils/decrypt/$(am__dirstamp) - -rm -f utils/libfat/$(DEPDIR)/$(am__dirstamp) - -rm -f utils/libfat/$(am__dirstamp) -- -rm -f utils/tinyxml/$(DEPDIR)/$(am__dirstamp) -- -rm -f utils/tinyxml/$(am__dirstamp) - - maintainer-clean-generic: - @echo "This command is intended for maintainers to use" -@@ -1460,7 +1426,7 @@ clean: clean-recursive - clean-am: clean-generic clean-noinstLIBRARIES mostlyclean-am - - distclean: distclean-recursive -- -rm -rf ./$(DEPDIR) addons/$(DEPDIR) filter/$(DEPDIR) metaspu/$(DEPDIR) utils/$(DEPDIR) utils/AsmJit/core/$(DEPDIR) utils/AsmJit/x86/$(DEPDIR) utils/decrypt/$(DEPDIR) utils/libfat/$(DEPDIR) utils/tinyxml/$(DEPDIR) -+ -rm -rf ./$(DEPDIR) addons/$(DEPDIR) filter/$(DEPDIR) metaspu/$(DEPDIR) utils/$(DEPDIR) utils/AsmJit/core/$(DEPDIR) utils/AsmJit/x86/$(DEPDIR) utils/decrypt/$(DEPDIR) utils/libfat/$(DEPDIR) - -rm -f Makefile - distclean-am: clean-am distclean-compile distclean-generic \ - distclean-tags -@@ -1506,7 +1472,7 @@ install-ps-am: - installcheck-am: - - maintainer-clean: maintainer-clean-recursive -- -rm -rf ./$(DEPDIR) addons/$(DEPDIR) filter/$(DEPDIR) metaspu/$(DEPDIR) utils/$(DEPDIR) utils/AsmJit/core/$(DEPDIR) utils/AsmJit/x86/$(DEPDIR) utils/decrypt/$(DEPDIR) utils/libfat/$(DEPDIR) utils/tinyxml/$(DEPDIR) -+ -rm -rf ./$(DEPDIR) addons/$(DEPDIR) filter/$(DEPDIR) metaspu/$(DEPDIR) utils/$(DEPDIR) utils/AsmJit/core/$(DEPDIR) utils/AsmJit/x86/$(DEPDIR) utils/decrypt/$(DEPDIR) utils/libfat/$(DEPDIR) - -rm -f Makefile - maintainer-clean-am: distclean-am maintainer-clean-generic - -diff --git a/src/cli/Makefile.am b/src/cli/Makefile.am -index 1985209..d958323 100755 ---- a/src/cli/Makefile.am -+++ b/src/cli/Makefile.am -@@ -5,7 +5,7 @@ AM_CPPFLAGS += $(SDL_CFLAGS) $(ALSA_CFLAGS) $(LIBAGG_CFLAGS) $(GLIB_CFLAGS) $(GT - - bin_PROGRAMS = desmume-cli - desmume_cli_SOURCES = main.cpp ../sndsdl.cpp ../ctrlssdl.h ../ctrlssdl.cpp ../driver.h ../driver.cpp --desmume_cli_LDADD = ../libdesmume.a $(SDL_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) $(GLIB_LIBS) $(GTHREAD_LIBS) $(LIBSOUNDTOUCH_LIBS) -+desmume_cli_LDADD = ../libdesmume.a $(SDL_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) $(GLIB_LIBS) $(GTHREAD_LIBS) $(LIBSOUNDTOUCH_LIBS) -ltinyxml - if HAVE_GDB_STUB - desmume_cli_LDADD += ../gdbstub/libgdbstub.a - endif -diff --git a/src/cli/Makefile.in b/src/cli/Makefile.in -index 14efd77..f04ab7d 100644 ---- a/src/cli/Makefile.in -+++ b/src/cli/Makefile.in -@@ -311,7 +311,7 @@ AM_LDFLAGS = - desmume_cli_SOURCES = main.cpp ../sndsdl.cpp ../ctrlssdl.h ../ctrlssdl.cpp ../driver.h ../driver.cpp - desmume_cli_LDADD = ../libdesmume.a $(SDL_LIBS) $(ALSA_LIBS) \ - $(LIBAGG_LIBS) $(GLIB_LIBS) $(GTHREAD_LIBS) \ -- $(LIBSOUNDTOUCH_LIBS) $(am__append_1) -+ $(LIBSOUNDTOUCH_LIBS) -ltinyxml $(am__append_1) - all: all-recursive - - .SUFFIXES: -diff --git a/src/gtk-glade/Makefile.am b/src/gtk-glade/Makefile.am -index b667fca..c79fdac 100755 ---- a/src/gtk-glade/Makefile.am -+++ b/src/gtk-glade/Makefile.am -@@ -33,7 +33,7 @@ desmume_glade_SOURCES = \ - desmume_glade_LDADD = ../libdesmume.a \ - $(SDL_LIBS) $(GTKGLEXT_LIBS) $(LIBGLADE_LIBS) \ - $(GTHREAD_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) \ -- $(LIBSOUNDTOUCH_LIBS) -+ $(LIBSOUNDTOUCH_LIBS) -ltinyxml - if HAVE_GDB_STUB - desmume_glade_LDADD += ../gdbstub/libgdbstub.a - endif -diff --git a/src/gtk-glade/Makefile.in b/src/gtk-glade/Makefile.in -index 5f77ec5..012aa72 100644 ---- a/src/gtk-glade/Makefile.in -+++ b/src/gtk-glade/Makefile.in -@@ -367,7 +367,7 @@ desmume_glade_SOURCES = \ - - desmume_glade_LDADD = ../libdesmume.a $(SDL_LIBS) $(GTKGLEXT_LIBS) \ - $(LIBGLADE_LIBS) $(GTHREAD_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) \ -- $(LIBSOUNDTOUCH_LIBS) $(am__append_1) -+ $(LIBSOUNDTOUCH_LIBS) -ltinyxml $(am__append_1) - all: all-recursive - - .SUFFIXES: -diff --git a/src/gtk/Makefile.am b/src/gtk/Makefile.am -index 59cb1f2..e451102 100755 ---- a/src/gtk/Makefile.am -+++ b/src/gtk/Makefile.am -@@ -32,7 +32,7 @@ desmume_SOURCES = \ - ../filter/videofilter.cpp ../filter/videofilter.h \ - main.cpp main.h - desmume_LDADD = ../libdesmume.a \ -- $(SDL_LIBS) $(GTK_LIBS) $(GTHREAD_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) $(LIBSOUNDTOUCH_LIBS) -+ $(SDL_LIBS) $(GTK_LIBS) $(GTHREAD_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) $(LIBSOUNDTOUCH_LIBS) -ltinyxml - if HAVE_GDB_STUB - desmume_LDADD += ../gdbstub/libgdbstub.a - endif -diff --git a/src/gtk/Makefile.in b/src/gtk/Makefile.in -index e1a2c37..75f392f 100644 ---- a/src/gtk/Makefile.in -+++ b/src/gtk/Makefile.in -@@ -382,7 +382,7 @@ desmume_SOURCES = \ - - desmume_LDADD = ../libdesmume.a $(SDL_LIBS) $(GTK_LIBS) \ - $(GTHREAD_LIBS) $(ALSA_LIBS) $(LIBAGG_LIBS) \ -- $(LIBSOUNDTOUCH_LIBS) $(am__append_1) $(am__append_2) \ -+ $(LIBSOUNDTOUCH_LIBS) -ltinyxml $(am__append_1) $(am__append_2) \ - $(am__append_3) - UPDATE_DESKTOP = \ - appsdir=$(DESTDIR)$(datadir)/applications ; \ -diff --git a/src/utils/advanscene.cpp b/src/utils/advanscene.cpp -index 8d8f370..09c35bb 100755 ---- a/src/utils/advanscene.cpp -+++ b/src/utils/advanscene.cpp -@@ -19,7 +19,7 @@ - #include <time.h> - - #define TIXML_USE_STL --#include "tinyxml/tinyxml.h" -+#include <tinyxml.h> - - #include "advanscene.h" - #include "../common.h" diff --git a/pkgs/misc/emulators/desmume/default.nix b/pkgs/misc/emulators/desmume/default.nix index 03e97743905..2e959c756e3 100644 --- a/pkgs/misc/emulators/desmume/default.nix +++ b/pkgs/misc/emulators/desmume/default.nix @@ -1,45 +1,75 @@ -{ lib, stdenv, fetchurl, fetchpatch -, pkg-config, libtool, intltool +{ lib +, stdenv +, fetchFromGitHub +, SDL2 +, agg +, alsa-lib +, desktop-file-utils +, gtk3 +, intltool +, libGLU , libXmu +, libpcap +, libtool , lua +, meson +, ninja +, openal +, pkg-config +, soundtouch , tinyxml -, agg, alsa-lib, soundtouch, openal -, desktop-file-utils -, gtk2, gtkglext, libglade -, libGLU, libpcap, SDL, zziplib }: +, zlib +}: -with lib; stdenv.mkDerivation rec { - pname = "desmume"; - version = "0.9.11"; + version = "0.9.11+unstable=2021-09-22"; - src = fetchurl { - url = "mirror://sourceforge/project/desmume/desmume/${version}/${pname}-${version}.tar.gz"; - sha256 = "15l8wdw3q61fniy3h93d84dnm6s4pyadvh95a0j6d580rjk4pcrs"; + src = fetchFromGitHub { + owner = "TASVideos"; + repo = pname; + rev = "7fc2e4b6b6a58420de65a4089d4df3934d7a46b1"; + hash = "sha256-sTCyjQ31w1Lp+aa3VQ7/rdLbhjnqthce54mjKJZQIDM="; }; - patches = [ - ./gcc6_fixes.patch - ./gcc7_fixes.patch - ./01_use_system_tinyxml.patch + nativeBuildInputs = [ + desktop-file-utils + intltool + libtool + lua + meson + ninja + pkg-config + ]; + + buildInputs = [ + SDL2 + agg + alsa-lib + gtk3 + libGLU + libXmu + libpcap + openal + soundtouch + tinyxml + zlib ]; - CXXFLAGS = "-fpermissive"; + hardeningDisable = [ "format" ]; - buildInputs = - [ pkg-config libtool intltool libXmu lua agg alsa-lib soundtouch - openal desktop-file-utils gtk2 gtkglext libglade - libGLU libpcap SDL zziplib tinyxml ]; + preConfigure = '' + cd desmume/src/frontend/posix + ''; - configureFlags = [ - "--disable-glade" # Failing on compile step - "--enable-openal" - "--enable-glx" - "--enable-hud" - "--enable-wifi" ]; + mesonFlags = [ + "-Db_pie=true" + "-Dopenal=true" + "-Dwifi=true" + ]; - meta = { + meta = with lib; { + homepage = "http://www.desmume.com"; description = "An open-source Nintendo DS emulator"; longDescription = '' DeSmuME is a freeware emulator for the NDS roms & Nintendo DS @@ -48,10 +78,9 @@ stdenv.mkDerivation rec { roms. DeSmuME is also able to emulate nearly all of the commercial nds rom titles which other DS Emulators aren't. ''; - homepage = "http://www.desmume.com"; - license = licenses.gpl1Plus; + license = licenses.gpl2Plus; maintainers = [ maintainers.AndersonTorres ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } -# TODO: investigate glade +# TODO: investigate the patches diff --git a/pkgs/misc/emulators/desmume/gcc6_fixes.patch b/pkgs/misc/emulators/desmume/gcc6_fixes.patch deleted file mode 100644 index 6eb9576f649..00000000000 --- a/pkgs/misc/emulators/desmume/gcc6_fixes.patch +++ /dev/null @@ -1,59 +0,0 @@ -From: zeromus -Origin: upstream, https://sourceforge.net/p/desmume/code/5514, https://sourceforge.net/p/desmume/code/5517, https://sourceforge.net/p/desmume/code/5430 -Subject: fix GCC6 issues -Bug: https://sourceforge.net/p/desmume/bugs/1570/ -Bug-Debian: http://bugs.debian.org/811691 - -Index: desmume/src/MMU_timing.h -=================================================================== ---- desmume/src/MMU_timing.h (revision 5513) -+++ desmume/src/MMU_timing.h (revision 5517) -@@ -155,8 +155,8 @@ - enum { ASSOCIATIVITY = 1 << ASSOCIATIVESHIFT }; - enum { BLOCKSIZE = 1 << BLOCKSIZESHIFT }; - enum { TAGSHIFT = SIZESHIFT - ASSOCIATIVESHIFT }; -- enum { TAGMASK = (u32)(~0 << TAGSHIFT) }; -- enum { BLOCKMASK = ((u32)~0 >> (32 - TAGSHIFT)) & (u32)(~0 << BLOCKSIZESHIFT) }; -+ enum { TAGMASK = (u32)(~0U << TAGSHIFT) }; -+ enum { BLOCKMASK = ((u32)~0U >> (32 - TAGSHIFT)) & (u32)(~0U << BLOCKSIZESHIFT) }; - enum { WORDSIZE = sizeof(u32) }; - enum { WORDSPERBLOCK = (1 << BLOCKSIZESHIFT) / WORDSIZE }; - enum { DATAPERWORD = WORDSIZE * ASSOCIATIVITY }; -Index: desmume/src/ctrlssdl.cpp -=================================================================== ---- desmume/src/ctrlssdl.cpp (revision 5513) -+++ desmume/src/ctrlssdl.cpp (revision 5517) -@@ -200,7 +200,7 @@ - break; - case SDL_JOYAXISMOTION: - /* Dead zone of 50% */ -- if( (abs(event.jaxis.value) >> 14) != 0 ) -+ if( ((u32)abs(event.jaxis.value) >> 14) != 0 ) - { - key = ((event.jaxis.which & 15) << 12) | JOY_AXIS << 8 | ((event.jaxis.axis & 127) << 1); - if (event.jaxis.value > 0) { -@@ -370,7 +370,7 @@ - Note: button constants have a 1bit offset. */ - case SDL_JOYAXISMOTION: - key_code = ((event->jaxis.which & 15) << 12) | JOY_AXIS << 8 | ((event->jaxis.axis & 127) << 1); -- if( (abs(event->jaxis.value) >> 14) != 0 ) -+ if( ((u32)abs(event->jaxis.value) >> 14) != 0 ) - { - if (event->jaxis.value > 0) - key_code |= 1; -Index: desmume/src/wifi.cpp -=================================================================== ---- desmume/src/wifi.cpp (revision 5429) -+++ desmume/src/wifi.cpp (revision 5430) -@@ -320,9 +320,9 @@ - - #if (WIFI_LOGGING_LEVEL >= 1) - #if WIFI_LOG_USE_LOGC -- #define WIFI_LOG(level, ...) if(level <= WIFI_LOGGING_LEVEL) LOGC(8, "WIFI: "__VA_ARGS__); -+ #define WIFI_LOG(level, ...) if(level <= WIFI_LOGGING_LEVEL) LOGC(8, "WIFI: " __VA_ARGS__); - #else -- #define WIFI_LOG(level, ...) if(level <= WIFI_LOGGING_LEVEL) printf("WIFI: "__VA_ARGS__); -+ #define WIFI_LOG(level, ...) if(level <= WIFI_LOGGING_LEVEL) printf("WIFI: " __VA_ARGS__); - #endif - #else - #define WIFI_LOG(level, ...) {} diff --git a/pkgs/misc/emulators/desmume/gcc7_fixes.patch b/pkgs/misc/emulators/desmume/gcc7_fixes.patch deleted file mode 100644 index a4934ff6e61..00000000000 --- a/pkgs/misc/emulators/desmume/gcc7_fixes.patch +++ /dev/null @@ -1,18 +0,0 @@ -From e1f7039f1b06add4fb75b2f8774000b8f05574af Mon Sep 17 00:00:00 2001 -From: rogerman <rogerman@users.sf.net> -Date: Mon, 17 Aug 2015 21:15:04 +0000 -Subject: Fix bug with libfat string handling. - -diff --git a/src/utils/libfat/directory.cpp b/src/utils/libfat/directory.cpp -index 765d7ae5..b6d7f01f 100644 ---- a/src/utils/libfat/directory.cpp -+++ b/src/utils/libfat/directory.cpp -@@ -139,7 +139,7 @@ static size_t _FAT_directory_mbstoucs2 (ucs2_t* dst, const char* src, size_t len - int bytes; - size_t count = 0; - -- while (count < len-1 && src != '\0') { -+ while (count < len-1 && *src != '\0') { - bytes = mbrtowc (&tempChar, src, MB_CUR_MAX, &ps); - if (bytes > 0) { - *dst = (ucs2_t)tempChar; diff --git a/pkgs/misc/emulators/melonDS/default.nix b/pkgs/misc/emulators/melonDS/default.nix index bd3bffde54f..7123f496fad 100644 --- a/pkgs/misc/emulators/melonDS/default.nix +++ b/pkgs/misc/emulators/melonDS/default.nix @@ -26,12 +26,13 @@ mkDerivation rec { buildInputs = [ epoxy libarchive - libpcap libslirp qtbase SDL2 ]; + qtWrapperArgs = [ "--prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath [ libpcap ]}" ]; + meta = with lib; { homepage = "http://melonds.kuribo64.net/"; description = "Work in progress Nintendo DS emulator"; diff --git a/pkgs/misc/emulators/wine/base.nix b/pkgs/misc/emulators/wine/base.nix index 0023d9878b3..46532179edd 100644 --- a/pkgs/misc/emulators/wine/base.nix +++ b/pkgs/misc/emulators/wine/base.nix @@ -106,7 +106,7 @@ stdenv.mkDerivation ((lib.optionalAttrs (buildScript != null) { postInstall = let links = prefix: pkg: "ln -s ${pkg} $out/${prefix}/${pkg.name}"; - in '' + in lib.optionalString supportFlags.embedInstallers '' mkdir -p $out/share/wine/gecko $out/share/wine/mono/ ${lib.strings.concatStringsSep "\n" ((map (links "share/wine/gecko") geckos) diff --git a/pkgs/misc/emulators/wine/default.nix b/pkgs/misc/emulators/wine/default.nix index 6def48b4f59..023d013740d 100644 --- a/pkgs/misc/emulators/wine/default.nix +++ b/pkgs/misc/emulators/wine/default.nix @@ -45,6 +45,7 @@ faudioSupport ? false, vkd3dSupport ? false, mingwSupport ? wineRelease != "stable", + embedInstallers ? false # The Mono and Gecko MSI installers }: let wine-build = build: release: @@ -57,7 +58,7 @@ let wine-build = build: release: gsmSupport gphoto2Support ldapSupport fontconfigSupport alsaSupport pulseaudioSupport xineramaSupport gtkSupport openclSupport xmlSupport tlsSupport openglSupport gstreamerSupport udevSupport vulkanSupport sdlSupport faudioSupport - vkd3dSupport mingwSupport; + vkd3dSupport mingwSupport embedInstallers; }; }); diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix index df4942fdbd7..da53357c7a7 100644 --- a/pkgs/misc/vim-plugins/generated.nix +++ b/pkgs/misc/vim-plugins/generated.nix @@ -77,12 +77,12 @@ final: prev: ale = buildVimPluginFrom2Nix { pname = "ale"; - version = "2021-09-21"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "dense-analysis"; repo = "ale"; - rev = "f8a4c78b5b293d11da9075373c9de0bb5afdeffe"; - sha256 = "0jmcsaz9hswcwkdmisggr34sn10mrfvybk5b8cmi86v8swz559yw"; + rev = "c9c89a1853c01f3451edd7105814d123023ddbd8"; + sha256 = "1szaw6jar86376wflzy644zm8l1ah8h5bvqkl7sxd8wijkxn1gph"; }; meta.homepage = "https://github.com/dense-analysis/ale/"; }; @@ -281,12 +281,12 @@ final: prev: barbar-nvim = buildVimPluginFrom2Nix { pname = "barbar.nvim"; - version = "2021-08-16"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "romgrk"; repo = "barbar.nvim"; - rev = "7a19aac3d401c997a6fb7067a7756a4a77184c2e"; - sha256 = "1jbbnd7s2kql44zv7xkv9hmyj0482yjnm57l8nl0kdf8b61zzi3s"; + rev = "6ee1ce39f7294397a651546f708953faecb7869b"; + sha256 = "176cv5k2k4ygrdyigikakbjm6hn4lbn1n919nafvkrhnwmkw05gv"; }; meta.homepage = "https://github.com/romgrk/barbar.nvim/"; }; @@ -365,12 +365,12 @@ final: prev: bufdelete-nvim = buildVimPluginFrom2Nix { pname = "bufdelete.nvim"; - version = "2021-09-09"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "famiu"; repo = "bufdelete.nvim"; - rev = "39d7bfa1802895920f2327b41ab8e41f4b14c866"; - sha256 = "0j1h6h6frngpwx4z42jpxlmpqh736lilvkxhdlc8hcx6cxvw3z0r"; + rev = "456a08ff8dad82d52fdc439a44bfc8626f92cb0f"; + sha256 = "1ybfnizdr14gixv19vqm8jh1lvw9aka26r7yizsfik3jc6rqrjnf"; }; meta.homepage = "https://github.com/famiu/bufdelete.nvim/"; }; @@ -449,12 +449,12 @@ final: prev: chadtree = buildVimPluginFrom2Nix { pname = "chadtree"; - version = "2021-09-21"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "ms-jpq"; repo = "chadtree"; - rev = "037682510c0229437b4969dd1780d88b4eb10718"; - sha256 = "0y34w513wl77i5iq1930xv04hhd4ndiy21n728bj6bv7fkqbs95c"; + rev = "fad83b8841b6f0de00d70d771ee975e15d2d4f23"; + sha256 = "0fzr7b9a1h7d85skiy9pm2c7v03symvkrzsyp6cnrm0rcbs001d9"; }; meta.homepage = "https://github.com/ms-jpq/chadtree/"; }; @@ -689,12 +689,12 @@ final: prev: cmp_luasnip = buildVimPluginFrom2Nix { pname = "cmp_luasnip"; - version = "2021-09-20"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "saadparwaiz1"; repo = "cmp_luasnip"; - rev = "a0fb34a0ecfd06ae74f90517bb4da1e27223ec34"; - sha256 = "1y6vpb5l2qy9vis2flm5s074lkhagbibgjwrzh8vzbfjghywadls"; + rev = "a93949643912a5e8cb64075af4b50d38a0b2fb22"; + sha256 = "12qdi9hsrhpf67m5im7y3hgq33dsfkqnvvyqx3ddqk1y5mdgc069"; }; meta.homepage = "https://github.com/saadparwaiz1/cmp_luasnip/"; }; @@ -942,12 +942,12 @@ final: prev: completion-tabnine = buildVimPluginFrom2Nix { pname = "completion-tabnine"; - version = "2020-12-08"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "aca"; repo = "completion-tabnine"; - rev = "278a6c6ae65fa753f21add8d797572043d8315d5"; - sha256 = "00a0bpjpnykr625dyavczg5ca4mbbw2j0g7l66v3kjn67r2wr18y"; + rev = "5d2c49aee5b5443d58cceb0c8411429d5fae1b6f"; + sha256 = "1cbdw1lby0v3i8xf1f5lcmafwq9rpsyk3x8hzq3k28nffckfrwnk"; }; meta.homepage = "https://github.com/aca/completion-tabnine/"; }; @@ -1062,12 +1062,12 @@ final: prev: crates-nvim = buildVimPluginFrom2Nix { pname = "crates.nvim"; - version = "2021-09-18"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "saecki"; repo = "crates.nvim"; - rev = "89d1032cc53fc7f846af98d1c63a0bdb6d9b5a34"; - sha256 = "01xqkadd85a91z1did0d7mj1m805ilm88bsk0a893s66viyvqx57"; + rev = "af2e0db3addbb67b2d10805a5d3e9aa69d183257"; + sha256 = "18izhqhas33rabq08gsjinz09zwaxkqb6slzv8n14df9n5cl4np7"; }; meta.homepage = "https://github.com/saecki/crates.nvim/"; }; @@ -1242,12 +1242,12 @@ final: prev: denite-nvim = buildVimPluginFrom2Nix { pname = "denite.nvim"; - version = "2021-08-28"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "Shougo"; repo = "denite.nvim"; - rev = "6260889ce501ea6f09967e23295bc2adf5cc480f"; - sha256 = "1akps9sxcyi9q07mg0vrn4fqhanmzx82npbillq0qbv8y41s75f5"; + rev = "6be8af3a55b79afad17714c8c8b12b2900a330b1"; + sha256 = "1x7zgb3cldc900fikfa83x0xvndsbvzjbykw16gnn224mf6kbacs"; }; meta.homepage = "https://github.com/Shougo/denite.nvim/"; }; @@ -1289,18 +1289,6 @@ final: prev: meta.homepage = "https://github.com/deoplete-plugins/deoplete-dictionary/"; }; - deoplete-emoji = buildVimPluginFrom2Nix { - pname = "deoplete-emoji"; - version = "2019-01-20"; - src = fetchFromGitHub { - owner = "fszymanski"; - repo = "deoplete-emoji"; - rev = "1dfa2da6ae3ee146ddfbfdba48cf45f0c1d57d7d"; - sha256 = "0drqbdmy8igq6rv7s2qlxsp391pydcynlr9gkaadzrg7pk4nlgsb"; - }; - meta.homepage = "https://github.com/fszymanski/deoplete-emoji/"; - }; - deoplete-fish = buildVimPluginFrom2Nix { pname = "deoplete-fish"; version = "2020-04-04"; @@ -1532,12 +1520,12 @@ final: prev: diffview-nvim = buildVimPluginFrom2Nix { pname = "diffview.nvim"; - version = "2021-09-08"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "sindrets"; repo = "diffview.nvim"; - rev = "520bb5c34dd24e70fc063d28bd6d0e8181bff118"; - sha256 = "0iz98b75alndxlgyabprk7vmgshqjiigmqmha5pjfw92z4g5lyw8"; + rev = "e525bbd4735436b8a521ec659f34b8b364d4096f"; + sha256 = "0551p0ffnq9zr3fpgc1bzcn71s8a5c1ah1qkvdbpw4n7k6mdy37h"; }; meta.homepage = "https://github.com/sindrets/diffview.nvim/"; }; @@ -1556,12 +1544,12 @@ final: prev: doki-theme-vim = buildVimPluginFrom2Nix { pname = "doki-theme-vim"; - version = "2021-09-05"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "doki-theme"; repo = "doki-theme-vim"; - rev = "a60ba5554efbab56112a06d9a1f09271fe23e96b"; - sha256 = "02idfg57j01y6d8zr2wddj7f79bk8cnqmb88h9s1b25zlf7yazmq"; + rev = "db5030876212e559c9050160b593e1e4e23216fe"; + sha256 = "1mv22ixfxmgifvlgf9fpvvy33iyns7m0b6hk0hg72g6bb224x3j7"; }; meta.homepage = "https://github.com/doki-theme/doki-theme-vim/"; }; @@ -1580,36 +1568,36 @@ final: prev: dracula-vim = buildVimPluginFrom2Nix { pname = "dracula-vim"; - version = "2021-09-04"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "dracula"; repo = "vim"; - rev = "d1864ac0734ce51150affa96a35a1e01ade08b79"; - sha256 = "1jyhkj22ivav6kp7rh3fkjka8w5phvsa4r82s9b6lv39vr10nj4w"; + rev = "86eb25b3dc8aa228373723c92f102f9d5fffdf11"; + sha256 = "178wmg12bl30nq3plxa43j7597lzq7dm9hi7zi07p2xxg4ipnzh6"; }; meta.homepage = "https://github.com/dracula/vim/"; }; echodoc-vim = buildVimPluginFrom2Nix { pname = "echodoc.vim"; - version = "2021-09-19"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "Shougo"; repo = "echodoc.vim"; - rev = "da6ce88098c71b1b959471af06b2f9f2412145a9"; - sha256 = "1n321bglnmd9xi7zrvg32l4ilanvx5aiqq4kcqrb9cai5dw8arla"; + rev = "7a43055fe5307ac2a44532fab0dc65538e5c9895"; + sha256 = "00kxkqybfziq1bk3wbfc1r2ni74w9svi3vafsz5azixylabx4grr"; }; meta.homepage = "https://github.com/Shougo/echodoc.vim/"; }; edge = buildVimPluginFrom2Nix { pname = "edge"; - version = "2021-09-18"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "sainnhe"; repo = "edge"; - rev = "25fbb8d382aa43432ae76ac8c4725de3e4ce3551"; - sha256 = "0s2vihz6z33h5r1nly9h40s5yvrgpm8maa9xfbxqk6xf960kydi2"; + rev = "3c4d98eec6604fdbbfec9dd86e8fd2a3d3c4b113"; + sha256 = "1624gwlkvr6myw0l7srha0dk9053g0dsnfkbxsyrq1s17day69zf"; }; meta.homepage = "https://github.com/sainnhe/edge/"; }; @@ -1762,12 +1750,12 @@ final: prev: feline-nvim = buildVimPluginFrom2Nix { pname = "feline.nvim"; - version = "2021-09-17"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "famiu"; repo = "feline.nvim"; - rev = "5d152e2cc28c172b42f4caba8baf0973f6a6ece6"; - sha256 = "0mzvh62zphb35kjzx9d09k7sak6fqsk1lcmycgjxk4kydjiw68za"; + rev = "a67897405f23cce54473d2afbc1a7df63688b815"; + sha256 = "1wi2rqbkp6hz454kxi5fznb0lkac59f99ffj0s0snzzq21d3k5d5"; }; meta.homepage = "https://github.com/famiu/feline.nvim/"; }; @@ -1907,12 +1895,12 @@ final: prev: friendly-snippets = buildVimPluginFrom2Nix { pname = "friendly-snippets"; - version = "2021-09-16"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "rafamadriz"; repo = "friendly-snippets"; - rev = "31cdf6ab00898ae80e2bfe870378a499697da725"; - sha256 = "0iafqh05h3v5bnvigrb6bnv0sn6lps64blqfnksr35i60yljw878"; + rev = "4b64ba3e4ed30e96125b5725a3475ca6fb417c6c"; + sha256 = "0i5qp89ggwknh99yxrsdb8ywffsdhr2lrigllhl4ad1lrgbfmjz7"; }; meta.homepage = "https://github.com/rafamadriz/friendly-snippets/"; }; @@ -1979,12 +1967,12 @@ final: prev: fzf-lsp-nvim = buildVimPluginFrom2Nix { pname = "fzf-lsp.nvim"; - version = "2021-09-14"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "gfanto"; repo = "fzf-lsp.nvim"; - rev = "8757eccc3948aa6107448d7fee2de226f0b7040b"; - sha256 = "0fjjwqkb5xl2prk8im8ndci73zlaaazr5x92aa69qvsjkbzvq7fw"; + rev = "6ccdcc3527848af12093a6e4c47dc8cbbe59b8dd"; + sha256 = "0a5d17ik3jvxd0nv3djp4x2drxbg121pl4v1gn2bgwl2mf0rgdn5"; }; meta.homepage = "https://github.com/gfanto/fzf-lsp.nvim/"; }; @@ -2135,12 +2123,12 @@ final: prev: gitsigns-nvim = buildVimPluginFrom2Nix { pname = "gitsigns.nvim"; - version = "2021-09-20"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "lewis6991"; repo = "gitsigns.nvim"; - rev = "60403b46c67ee3ead7e59715ceab27a2affb2e6e"; - sha256 = "1mq5nyhy9cxp45bk261jzbh1yaniy0xh22v6yzqg5mfbjipmvcpc"; + rev = "805b12a9b7b1997a47b185cdb2938e0f3e428714"; + sha256 = "0lvf9i2px2s54rn0ahp0z0adn8d9qm051jaxqxmpn718kibknl7k"; }; meta.homepage = "https://github.com/lewis6991/gitsigns.nvim/"; }; @@ -2207,12 +2195,12 @@ final: prev: goto-preview = buildVimPluginFrom2Nix { pname = "goto-preview"; - version = "2021-09-21"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "rmagatti"; repo = "goto-preview"; - rev = "0f2f5a960f4de920741614bc5142d9c83a775254"; - sha256 = "1g9mf0zyd5favsspy8sa7j25x0981n4fyhrdxix3m1dglcpc1h5b"; + rev = "22e1a28b4189fe693efc52f3ada4a6103f40dc46"; + sha256 = "17jk0b5cbiy4l7vrqc22ncixqj2lxnjicjld65dsg4gcrjmhy17y"; }; meta.homepage = "https://github.com/rmagatti/goto-preview/"; }; @@ -2267,24 +2255,24 @@ final: prev: gruvbox-material = buildVimPluginFrom2Nix { pname = "gruvbox-material"; - version = "2021-09-18"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "sainnhe"; repo = "gruvbox-material"; - rev = "94477f86aba2eef070497c1624c7b8d06e183b15"; - sha256 = "1wpmk6addq754172fp4pxcad6sik85kssqzg23asjvk0sviaf9i7"; + rev = "b8be59288d8f120bd24c456c6ec62b6ea03d0fa0"; + sha256 = "158sd6n6hali2zaxq8wnjp4qd0nndfkv84fvlln7mm6mp22ynq7k"; }; meta.homepage = "https://github.com/sainnhe/gruvbox-material/"; }; gruvbox-nvim = buildVimPluginFrom2Nix { pname = "gruvbox.nvim"; - version = "2021-08-19"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "ellisonleao"; repo = "gruvbox.nvim"; - rev = "24494189e723b71c1683c58ecfd0825d202b2bf8"; - sha256 = "1zv7gmq8q5qszb2pxfiwkzwbm4yk2zbrly1whv2kpymlik37i7as"; + rev = "88202213fea9e2e081ad6a40bfb975b2b9434733"; + sha256 = "1vwjq6wgayh7n7lxaj5qqyf7xjqfgqp9mb9jlnqyfxl4b6phm2aa"; }; meta.homepage = "https://github.com/ellisonleao/gruvbox.nvim/"; }; @@ -2495,12 +2483,12 @@ final: prev: indent-blankline-nvim = buildVimPluginFrom2Nix { pname = "indent-blankline.nvim"; - version = "2021-09-21"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "lukas-reineke"; repo = "indent-blankline.nvim"; - rev = "f39a3a58baa7f6dbe76db9c8b36473eedb27348d"; - sha256 = "00qwhvhfx8a6nbw6b2jjrgnj1drslqqx8yrd50324iblxhs9gbf4"; + rev = "1b852dcb92fbef837ff6a0ef0f9269e4fd234370"; + sha256 = "0r63crm8bymq44wbmc563gdhqvwmyfb1qsyyjkdayvyp45bq9ms0"; }; meta.homepage = "https://github.com/lukas-reineke/indent-blankline.nvim/"; }; @@ -2517,6 +2505,18 @@ final: prev: meta.homepage = "https://github.com/Yggdroot/indentLine/"; }; + inkpot = buildVimPluginFrom2Nix { + pname = "inkpot"; + version = "2013-02-10"; + src = fetchFromGitHub { + owner = "ciaranm"; + repo = "inkpot"; + rev = "b86ad4dc977d3e92ca713c83bc225526a7d77070"; + sha256 = "1s9hizzjfd6szj5961hmmi767b3mk92q7jq94dff8c6zlza829gy"; + }; + meta.homepage = "https://github.com/ciaranm/inkpot/"; + }; + intero-neovim = buildVimPluginFrom2Nix { pname = "intero-neovim"; version = "2019-11-15"; @@ -2664,12 +2664,12 @@ final: prev: julia-vim = buildVimPluginFrom2Nix { pname = "julia-vim"; - version = "2021-08-04"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "JuliaEditorSupport"; repo = "julia-vim"; - rev = "9d7d6af330f9cbd7d4d536b5952b71a64790621d"; - sha256 = "1vzwa0nrwvfpiqvaad4jykpx1h5blsl3l125xzhx7vxgksmmrxbs"; + rev = "ee8465c7c21ea9a3ebcac30156105bdadd23751c"; + sha256 = "10a9kwsws9haribmw7r3c80cygwza3cihs2i096vzg8010yx78fx"; }; meta.homepage = "https://github.com/JuliaEditorSupport/julia-vim/"; }; @@ -2916,12 +2916,12 @@ final: prev: lightspeed-nvim = buildVimPluginFrom2Nix { pname = "lightspeed.nvim"; - version = "2021-09-17"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "ggandor"; repo = "lightspeed.nvim"; - rev = "6ca32a155406d11093f64fa97e0ba8c6802fb7e1"; - sha256 = "0f886hldkv4ws18m492lhymp92mxympp2maqr8zy4hh06i7k123a"; + rev = "27625ea437f44570477a608a1091ece9e244fb53"; + sha256 = "0fbksvyrwrs9kmmwnpa6rj5rsir37d27kfmxlvj8sbayn8ch95hl"; }; meta.homepage = "https://github.com/ggandor/lightspeed.nvim/"; }; @@ -3012,12 +3012,12 @@ final: prev: lsp_signature-nvim = buildVimPluginFrom2Nix { pname = "lsp_signature.nvim"; - version = "2021-09-19"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "ray-x"; repo = "lsp_signature.nvim"; - rev = "99a81120838dad866a42823670e6b6666eb8c9c5"; - sha256 = "0mvv9xkks18d581jc6s2j2hkds3ajg7r9qsxxrrfn4g0n03gcka4"; + rev = "8f89ab239ef2569096b6805ea093a322985b8e4e"; + sha256 = "0cjx5xbmwkjbvcg0ak33lbz14ssqn84rikwkc0615fsrz323r36j"; }; meta.homepage = "https://github.com/ray-x/lsp_signature.nvim/"; }; @@ -3072,12 +3072,12 @@ final: prev: luasnip = buildVimPluginFrom2Nix { pname = "luasnip"; - version = "2021-09-21"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "l3mon4d3"; repo = "luasnip"; - rev = "800e1876df24a178252520253eb63cb5c9f0e1b9"; - sha256 = "1w334jqw7b0bmrhx0036iaxb9lpi17vb1wq99kgwada7yxl5a72s"; + rev = "528611c602c3e18526fcd9d0663799f7011b00ae"; + sha256 = "00nsr58j4982pc8s8ncsnv0nv0g5kz63p8m1w4jc62m89ww7fd8h"; }; meta.homepage = "https://github.com/l3mon4d3/luasnip/"; }; @@ -3492,24 +3492,24 @@ final: prev: neoformat = buildVimPluginFrom2Nix { pname = "neoformat"; - version = "2021-09-14"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "sbdchd"; repo = "neoformat"; - rev = "f072ef425be8a51d2130edeb7d773a1f8dc20313"; - sha256 = "0av57z1smv6nj64d5hdqgvzcrd3h0bypi1hcl22k5zpwmaqf40m2"; + rev = "964c66fa22500ae7375114342d212d7fe15da341"; + sha256 = "18gfwjgmk56n5xw4xrl8kn860a5sjqsbk14zjbc599id7m4jnaw9"; }; meta.homepage = "https://github.com/sbdchd/neoformat/"; }; neogit = buildVimPluginFrom2Nix { pname = "neogit"; - version = "2021-09-16"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "TimUntersberger"; repo = "neogit"; - rev = "28e652d110e7bda263bd4b0cb3c1484dce89cd93"; - sha256 = "0106iy1zkd13i26dviv6w8jgm9hapimpj97passh2khac3ajln5c"; + rev = "d57271a25fd2ccc06c23ab34dc7f8c90825b6ca6"; + sha256 = "1vwr61grlyrdj5kg0gqw33ww0f58ifcnwp2d6w905a8zilnvm37l"; }; meta.homepage = "https://github.com/TimUntersberger/neogit/"; }; @@ -3696,12 +3696,12 @@ final: prev: nerdtree = buildVimPluginFrom2Nix { pname = "nerdtree"; - version = "2021-09-20"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "preservim"; repo = "nerdtree"; - rev = "e731b845590017493224dfcb7403c2332105b700"; - sha256 = "1ksvs97cck1m8k1m6gngv62c7hh3l9ray82nmwyghs68mncn87nc"; + rev = "9310f91476a94ee9c2f3a587171893743a343e26"; + sha256 = "1si8qla86ng8cffbmfrk9gss0i3912yw0f1ph4bsiq0kk837lccp"; }; meta.homepage = "https://github.com/preservim/nerdtree/"; }; @@ -3732,12 +3732,12 @@ final: prev: nginx-vim = buildVimPluginFrom2Nix { pname = "nginx.vim"; - version = "2021-02-25"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "chr4"; repo = "nginx.vim"; - rev = "7b8e3ef48d8e60fe64bb1a85be52e66dd412c84d"; - sha256 = "00n3kx4gczryx968n0l7hqdxg6i4vfi3n3m4bdl5d3rwpbwdy6zy"; + rev = "b42ba30810d8cc7d765df98e09b9e3e473e35922"; + sha256 = "1ka85zsw1g1g2rqvq34wwh0n7wpgmvg8i5cxj39p4j5vxg14in46"; }; meta.homepage = "https://github.com/chr4/nginx.vim/"; }; @@ -3768,12 +3768,12 @@ final: prev: nnn-vim = buildVimPluginFrom2Nix { pname = "nnn.vim"; - version = "2021-09-14"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "mcchrish"; repo = "nnn.vim"; - rev = "8833bbfa7b341896cbb9f3ed9a3b4687461e6aad"; - sha256 = "0ilkspfnlqflp0854gmha4v6zlnmslb83laab25a972svpqrg8pf"; + rev = "93680e52a43b5c402ec20bb026fbdb5ec89b1906"; + sha256 = "1gvajghkipddaqw69h7iys7pm3f6k0y5pa52giddq2rsgkqsq399"; }; meta.homepage = "https://github.com/mcchrish/nnn.vim/"; }; @@ -3792,12 +3792,12 @@ final: prev: nord-nvim = buildVimPluginFrom2Nix { pname = "nord.nvim"; - version = "2021-09-20"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "shaunsingh"; repo = "nord.nvim"; - rev = "ebd3ff7b96ff8f9e75ec19f77bd10cb2bb7c8e84"; - sha256 = "1grnvi8glqffbr1k4sifr0bg6dkflarzj3f6c2jbm98l4dk3vps8"; + rev = "46d9df8bf6535c1bc751a4134fc52ea91068cfaa"; + sha256 = "19b4ix8py8vg2jrzhhzcp69jyl6snplii6bpyaasj5nhhjxslmlq"; }; meta.homepage = "https://github.com/shaunsingh/nord.nvim/"; }; @@ -3828,12 +3828,12 @@ final: prev: null-ls-nvim = buildVimPluginFrom2Nix { pname = "null-ls.nvim"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "jose-elias-alvarez"; repo = "null-ls.nvim"; - rev = "96b977966810b5038cb3b96ec54247c7a63c9c92"; - sha256 = "1yhcm3p9msw09jh968isg09dqn49gfbjbdpvqd638siij70zs9ki"; + rev = "204b4e66f13f72ff3f4d50b2484aaef7b17a733d"; + sha256 = "0ah3c4k5h7wy1nb5dazm2mpww1rsx4gzn8qpwlyl5jgwl0h76k3x"; }; meta.homepage = "https://github.com/jose-elias-alvarez/null-ls.nvim/"; }; @@ -3876,12 +3876,12 @@ final: prev: nvim-autopairs = buildVimPluginFrom2Nix { pname = "nvim-autopairs"; - version = "2021-09-20"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "windwp"; repo = "nvim-autopairs"; - rev = "19bb83320aec21d7fcb1514f3cb8bd8496d22ea8"; - sha256 = "18xwwdbzggfyy86mh1ji17a9b62d86cc1jnw9r93996ynqdrs87n"; + rev = "9196a8fa36d0a259f6b3fac5685c6427f02a35f9"; + sha256 = "1jcj4qmjhx4jvkc4y0vjl05dd9z55n296n2mwr2ps8xi5s56xhyf"; }; meta.homepage = "https://github.com/windwp/nvim-autopairs/"; }; @@ -3900,12 +3900,12 @@ final: prev: nvim-bqf = buildVimPluginFrom2Nix { pname = "nvim-bqf"; - version = "2021-09-01"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "kevinhwang91"; repo = "nvim-bqf"; - rev = "8f0eb6ba45acd8e9b3d4aeb4428cd22167c96c20"; - sha256 = "1pz4l85radaf71qbsdf8bnb4zf3c77x40hwnyy72p3mk6r1wivfd"; + rev = "84789c508a1d4323f494faa5cf18f7cb00b5cb81"; + sha256 = "0ddfkgx8235p07bnjmk01n9z5gnb51s8y22f905lfv2cn1jnaag5"; }; meta.homepage = "https://github.com/kevinhwang91/nvim-bqf/"; }; @@ -3936,16 +3936,28 @@ final: prev: nvim-cmp = buildVimPluginFrom2Nix { pname = "nvim-cmp"; - version = "2021-09-21"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "hrsh7th"; repo = "nvim-cmp"; - rev = "0a8ca50d9e96ae5b84e71146b5eb9d30baabc84a"; - sha256 = "1lbp45hbwzprfpzrhkws853dnv1ax63bqnzav04bl787kk5ryajn"; + rev = "cc21a61910b89422122cc0c67a8265247bd0db6a"; + sha256 = "0lql5v1dc3lwp85xkkj2xjqi7hbhhwnp84j704ay1mgxb2h7jqin"; }; meta.homepage = "https://github.com/hrsh7th/nvim-cmp/"; }; + nvim-code-action-menu = buildVimPluginFrom2Nix { + pname = "nvim-code-action-menu"; + version = "2021-09-28"; + src = fetchFromGitHub { + owner = "weilbith"; + repo = "nvim-code-action-menu"; + rev = "0fea23ef716546ed1491d9d27d1c58ba658c2e01"; + sha256 = "0s7ijj8323baxfamxk8zncdyf2zpl5c6pgfzy9kssv0z1ayl4463"; + }; + meta.homepage = "https://github.com/weilbith/nvim-code-action-menu/"; + }; + nvim-colorizer-lua = buildVimPluginFrom2Nix { pname = "nvim-colorizer.lua"; version = "2020-06-11"; @@ -3984,36 +3996,36 @@ final: prev: nvim-dap = buildVimPluginFrom2Nix { pname = "nvim-dap"; - version = "2021-09-20"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "mfussenegger"; repo = "nvim-dap"; - rev = "1ccfcc12f7d1019e4afa0a1bb64c371d0944d179"; - sha256 = "1xvvv6sxcsf6n3gxfrdxdcbvqfs8sc2fjwg6jz0rgbsavlis476b"; + rev = "00339d33dbde7aae1424e4cda53c8799e026b934"; + sha256 = "1fmp03xsr0flx9j8mbzs4s19zy1xzfjk78w9av8a6g3lpag5iinj"; }; meta.homepage = "https://github.com/mfussenegger/nvim-dap/"; }; nvim-dap-ui = buildVimPluginFrom2Nix { pname = "nvim-dap-ui"; - version = "2021-09-10"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "rcarriga"; repo = "nvim-dap-ui"; - rev = "945ab8c0def213b26fb87f24c1953541b60bd7e8"; - sha256 = "11jznj4a45i6221s1izr17nhlayi6ry6ma0a7x01cblfzdcg60as"; + rev = "547635e7ba1dace13189386c98c3c7b064d585c4"; + sha256 = "00i55cccg65r0zz58ap6if6wgrsm1n6r0clgf959sigmj8q9559h"; }; meta.homepage = "https://github.com/rcarriga/nvim-dap-ui/"; }; nvim-dap-virtual-text = buildVimPluginFrom2Nix { pname = "nvim-dap-virtual-text"; - version = "2021-07-25"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "theHamsta"; repo = "nvim-dap-virtual-text"; - rev = "ebd0a7850432e2c9b9651b8e4091e74e59604c77"; - sha256 = "17z8g124cg3m28fn418d3rgia6aa44xyw70h7kkl0w1xpa908n03"; + rev = "8ab2aa7b04a4f3c0c8d72dc6affc8e5e20410d93"; + sha256 = "1llrx9n0jg7j9q37lzjax2h1y1z6xp6a2d701q30j6l98yan6x9n"; }; meta.homepage = "https://github.com/theHamsta/nvim-dap-virtual-text/"; }; @@ -4032,24 +4044,24 @@ final: prev: nvim-gdb = buildVimPluginFrom2Nix { pname = "nvim-gdb"; - version = "2021-08-02"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "sakhnik"; repo = "nvim-gdb"; - rev = "f2c8d5b70f4cad18db5f15e897ba006aeba08f80"; - sha256 = "0vq9lb2vir0am85nwjqphdmlx7akvpvcfgw3mr15rvnc9spzh8ix"; + rev = "b35e18e02b9500fbb2773f6d494727cdca25e2d7"; + sha256 = "1l9flkh38l9iwp1dbnx3fpyv6x2680bshalyw9nw1ixxhx6ys456"; }; meta.homepage = "https://github.com/sakhnik/nvim-gdb/"; }; nvim-gps = buildVimPluginFrom2Nix { pname = "nvim-gps"; - version = "2021-09-19"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "smiteshp"; repo = "nvim-gps"; - rev = "aebf14fa2fdbdc468045d55d07641f498c548374"; - sha256 = "01hfm570hrx2paifnxxqirailxl5hfx22ay7j0cxk9v9z01p4dks"; + rev = "f73a6f012ee43013c8e6d8cfbb987208ead34182"; + sha256 = "0d088wkm3m8s4zipj7i8fd7lr6wakh725plxnsirdfljc3krv5cq"; }; meta.homepage = "https://github.com/smiteshp/nvim-gps/"; }; @@ -4092,12 +4104,12 @@ final: prev: nvim-jdtls = buildVimPluginFrom2Nix { pname = "nvim-jdtls"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "mfussenegger"; repo = "nvim-jdtls"; - rev = "2aae87e2f5f7afd2a6fb8c75bcb63908299390b2"; - sha256 = "1lxlh0jbz2krfl4f037h2x992yc5riqznq257rahy7n7nydd0yma"; + rev = "f9fcc46771bed33aa894b15d01e16812a6a80cb2"; + sha256 = "11dm843bzq3jm1q4jn0lna600wl8g70g7prgmwcgf0wisclxsyqw"; }; meta.homepage = "https://github.com/mfussenegger/nvim-jdtls/"; }; @@ -4116,24 +4128,24 @@ final: prev: nvim-lspconfig = buildVimPluginFrom2Nix { pname = "nvim-lspconfig"; - version = "2021-09-16"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "neovim"; repo = "nvim-lspconfig"; - rev = "aa0b9fd746d73a5ebbc72c732c645e96423d4504"; - sha256 = "01jgxf8bgra4sgh63zpb5xga9lyb3bvpqcdzjk3vp6gyks66fb6h"; + rev = "9ca394ec3a9305a6c30018ee6f731c9b23a4b25e"; + sha256 = "0w1nkiqnbskz8cj02nm9idhsavilk0akvfh4nagk72xvxvmxggi9"; }; meta.homepage = "https://github.com/neovim/nvim-lspconfig/"; }; nvim-lsputils = buildVimPluginFrom2Nix { pname = "nvim-lsputils"; - version = "2021-09-17"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "RishabhRD"; repo = "nvim-lsputils"; - rev = "e09390daebda810e24c7feb060fde2ea51f99a6c"; - sha256 = "1638an4mx5z0w9w3sinr4s3h6y3wsmymqh59pb5s6rx9pimqw7b2"; + rev = "3cd91183422c4a06f2a3477f909908331787351d"; + sha256 = "1sncdlwwfcqswa3xwk83ky5z6g5n40cg3fapixh54pg0iczak9ws"; }; meta.homepage = "https://github.com/RishabhRD/nvim-lsputils/"; }; @@ -4200,12 +4212,12 @@ final: prev: nvim-spectre = buildVimPluginFrom2Nix { pname = "nvim-spectre"; - version = "2021-09-21"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "windwp"; repo = "nvim-spectre"; - rev = "966a8ca70599e818108b92f49ff45105df98f3cc"; - sha256 = "1x20a8pklmhanqvbiykwznwpgsg2mr6l2m3w6xkhjxpll7kb2vy4"; + rev = "b755466cb3efe2b8c2c0e5f06f850b49b7ac2e79"; + sha256 = "0xn6n01s9smhpwl4w1d8i2hhwckw2slaq9pdyl2gm2dpmvk7sb2f"; }; meta.homepage = "https://github.com/windwp/nvim-spectre/"; }; @@ -4224,12 +4236,12 @@ final: prev: nvim-tree-lua = buildVimPluginFrom2Nix { pname = "nvim-tree.lua"; - version = "2021-09-12"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "kyazdani42"; repo = "nvim-tree.lua"; - rev = "d7f73b5ae9c8fa85535c32e2861c2cb97df5d56b"; - sha256 = "15j4q0qa84mg5bnnr216njbq26pq0a9z5ggd6s0wdfzkiqkhswz1"; + rev = "f8b5eb0bd84744a1434bae83692d6c7eb8dcb91a"; + sha256 = "0iyw7nwg2xz151748n4aqcrm5gi027rblppglnyx63qpwf128wav"; }; meta.homepage = "https://github.com/kyazdani42/nvim-tree.lua/"; }; @@ -4248,12 +4260,12 @@ final: prev: nvim-treesitter-context = buildVimPluginFrom2Nix { pname = "nvim-treesitter-context"; - version = "2021-08-08"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "romgrk"; repo = "nvim-treesitter-context"; - rev = "9c71ace8af7bfbfef3beb25c648c8d41f72bd09a"; - sha256 = "1jp4an8nni9m8528lza6vc0bj5pkmzfadzvqrgh6vi545ppmxihl"; + rev = "d4f0193c2a5e947247c2fc407c266bfb09b55a7b"; + sha256 = "1pg3yc1vlx7a0iwx1cgkzs3jpmg1rlw6db7dyjxkp0926vz7dv0k"; }; meta.homepage = "https://github.com/romgrk/nvim-treesitter-context/"; }; @@ -4320,12 +4332,12 @@ final: prev: nvim-web-devicons = buildVimPluginFrom2Nix { pname = "nvim-web-devicons"; - version = "2021-09-11"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "kyazdani42"; repo = "nvim-web-devicons"; - rev = "be8bb70502441e3bdd4911cf7998dc16d7535706"; - sha256 = "0sz6y0jzzb84ws5p8m49ry43dl9y0ahbppx5qy61i72bahv9hkpj"; + rev = "ba8a9362c96bc1fe62038640aa8ce902516707e4"; + sha256 = "06g7vcvvx1j5gl1143s6s41swix28qkf0c7185m7zn6yl0aljglz"; }; meta.homepage = "https://github.com/kyazdani42/nvim-web-devicons/"; }; @@ -4416,24 +4428,24 @@ final: prev: onedark-nvim = buildVimPluginFrom2Nix { pname = "onedark.nvim"; - version = "2021-09-16"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "olimorris"; repo = "onedark.nvim"; - rev = "8eceb078f8093c10b4a68d68203f4edf99db112a"; - sha256 = "1wnhgbi8hgrsnsq78iz7z1v7acfjrbhs08dykf0g4km03s4wa7qb"; + rev = "092e270b76940dff9a8270f97c2cec7eca97d31e"; + sha256 = "0c3axfdr2mz5sgmpsk510z9yj62iw58ds3amkbqd03nywn3s6bjv"; }; meta.homepage = "https://github.com/olimorris/onedark.nvim/"; }; onedark-vim = buildVimPluginFrom2Nix { pname = "onedark.vim"; - version = "2021-08-12"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "joshdick"; repo = "onedark.vim"; - rev = "bd199dfa76cd0ff4abef2a8ad19c44d35552879d"; - sha256 = "1xh3ypma3kmn0nb8szq14flfca6ss8k2f1vlnvyapa8dc9i731yy"; + rev = "cc8ecccd324ea0d8f07dc54806057806d0aff1d8"; + sha256 = "19jairk59a0f4p34h84sy8ia1qk2bcbwxk5i49vf5gxmi31pjpy4"; }; meta.homepage = "https://github.com/joshdick/onedark.vim/"; }; @@ -4476,24 +4488,24 @@ final: prev: orgmode-nvim = buildVimPluginFrom2Nix { pname = "orgmode.nvim"; - version = "2021-09-21"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "kristijanhusak"; repo = "orgmode.nvim"; - rev = "09d3d87b5a48cb31b8b1ddd84a1aa2012771fb9a"; - sha256 = "1l1jlcabjhqbz7dv0mr1qwajavq288y1ki07sjq70r8dzpzprg27"; + rev = "1f7b6a42102e13d4c14985e4e889e95ea91babde"; + sha256 = "1bzjcplg969krngln8kf07fjwlgd4817kv4rz9jbv96h503wfava"; }; meta.homepage = "https://github.com/kristijanhusak/orgmode.nvim/"; }; packer-nvim = buildVimPluginFrom2Nix { pname = "packer.nvim"; - version = "2021-09-20"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "wbthomason"; repo = "packer.nvim"; - rev = "0a2d8cbaa2045bdf3797af7a5abb2d42d0edecb0"; - sha256 = "01xx86wj4yx730mpzzy805dh72ridvbhk5540zylbjxwwb5dh1y7"; + rev = "a97caceb6b911bfd4b9fff91d38dae845192eb82"; + sha256 = "0j15m3xyw315rs0hhp86aqwk13bjac2q7z1zxa0zpq236njcr6ch"; }; meta.homepage = "https://github.com/wbthomason/packer.nvim/"; }; @@ -4596,12 +4608,12 @@ final: prev: plenary-nvim = buildVimPluginFrom2Nix { pname = "plenary.nvim"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "nvim-lua"; repo = "plenary.nvim"; - rev = "03ac32af651bb33acfc4ce20d5cb51bf5a424aa1"; - sha256 = "1rvw01i89mz43fzyxrynvfyxhb0xsijllf3y8yp5dvy61i9c7yar"; + rev = "8c6cc07a68b65eb707be44598f0084647d495978"; + sha256 = "05h5n7jj33y9vs6gc8hqlfd628j6i33s3c8fmfl6ahxwfygx2wpd"; }; meta.homepage = "https://github.com/nvim-lua/plenary.nvim/"; }; @@ -4873,12 +4885,12 @@ final: prev: refactoring-nvim = buildVimPluginFrom2Nix { pname = "refactoring.nvim"; - version = "2021-09-16"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "theprimeagen"; repo = "refactoring.nvim"; - rev = "fbea6d958aa337194d4c4fbcac9a983d7b99815e"; - sha256 = "0wpdy8ng64c0nn6fakg4yc4z8wrkligwfg70sdlyfcg2qi1skj87"; + rev = "040bf049b4696b1f9413a915f94bf49e41e53817"; + sha256 = "0ws3vc3iildz4w425w8dg6pximx27m3ikw6jllg8ass2sf7izf55"; }; meta.homepage = "https://github.com/theprimeagen/refactoring.nvim/"; }; @@ -4933,12 +4945,12 @@ final: prev: rnvimr = buildVimPluginFrom2Nix { pname = "rnvimr"; - version = "2021-08-22"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "kevinhwang91"; repo = "rnvimr"; - rev = "9f75ac3734bde4cd2cc1726b6936650ac4e144d6"; - sha256 = "03jgq6rd3rxs6hn2ksh8nbkbv7lpabcb7372xifq5vhgqqfj447j"; + rev = "ad2d155d7e1a633a597ed3b01e5a8eb084471620"; + sha256 = "1h9d1pqqs1vzk8qiqzjpycv880m3amb1synfp0sl43a1lbavk8qr"; }; meta.homepage = "https://github.com/kevinhwang91/rnvimr/"; }; @@ -4981,12 +4993,12 @@ final: prev: rust-tools-nvim = buildVimPluginFrom2Nix { pname = "rust-tools.nvim"; - version = "2021-09-18"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "simrat39"; repo = "rust-tools.nvim"; - rev = "83bf0cabe040a6e02b59296622c838831a2b5c4f"; - sha256 = "0d2gl768rgd5l1wh9sq2z24rdmg5g27ib6fjfdcvxdlc2s5g333l"; + rev = "eb6ac6ca69ec76fb5fde75d421022f6fd474629f"; + sha256 = "0fwkqpx8rcmfryzkzgm6wzzi5mdx9q6zhwcysxigx0i4xqlhdrrf"; }; meta.homepage = "https://github.com/simrat39/rust-tools.nvim/"; }; @@ -5234,12 +5246,12 @@ final: prev: sonokai = buildVimPluginFrom2Nix { pname = "sonokai"; - version = "2021-09-18"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "sainnhe"; repo = "sonokai"; - rev = "7722b4b25bd6319ed059ecebeb7857471b8357c9"; - sha256 = "129lcawsg31xbbw0h63f92g0dy5idgdb4v8sd1rl5sp9qqvzfp5a"; + rev = "3f34e4a1e78ab1049aa6b350008f8902f2855467"; + sha256 = "1hzqrx7dp9yv276fr9sddwpds50n1vmfik9fiq44djdqwd0z092v"; }; meta.homepage = "https://github.com/sainnhe/sonokai/"; }; @@ -5342,12 +5354,12 @@ final: prev: splitjoin-vim = buildVimPluginFrom2Nix { pname = "splitjoin.vim"; - version = "2021-08-02"; + version = "2021-09-19"; src = fetchFromGitHub { owner = "AndrewRadev"; repo = "splitjoin.vim"; - rev = "a27352edee29fad650f129a41908bc62efc82978"; - sha256 = "111z3kc3wc8n8cdmc0v4aysh8irfg4px0n0224wvsswax8ql2q74"; + rev = "fd0723bde223c8431746ecfc5cf2608c3bae828f"; + sha256 = "01s4kqv5jn15cdxwvbn7raikslqwrbmpf7gg2qwc51v1ynzi4iqk"; fetchSubmodules = true; }; meta.homepage = "https://github.com/AndrewRadev/splitjoin.vim/"; @@ -5355,24 +5367,24 @@ final: prev: sqlite-lua = buildVimPluginFrom2Nix { pname = "sqlite.lua"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "tami5"; repo = "sqlite.lua"; - rev = "828cf63fd2494cd47bd6d2a3a5b927157d3204d1"; - sha256 = "0h34xl1ich9m4xgz3a9ck9liyya6swmmc9iqcr61lihhgh5fz3qz"; + rev = "2bd7cda0ba014af27f5459588eceafe1e0250eea"; + sha256 = "1cdpq27phc6h23yv5hqisqa5yg3kcgf44d3yld2f277h32q4yp7i"; }; meta.homepage = "https://github.com/tami5/sqlite.lua/"; }; srcery-vim = buildVimPluginFrom2Nix { pname = "srcery-vim"; - version = "2021-09-04"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "srcery-colors"; repo = "srcery-vim"; - rev = "c4d0ae8e25528cdfaa18144b12ddd95ced21bef8"; - sha256 = "04ma5si8ig169gfq7pqjxx24fg6mmys41z4581dajrsfqbajc727"; + rev = "0325ba54262c7d03450d877b44e692c88b17cf7a"; + sha256 = "1vrvmp3ihjb8zlg5f00hs7d6km8p30g7pakaw5rdk60pxj21sw2v"; }; meta.homepage = "https://github.com/srcery-colors/srcery-vim/"; }; @@ -5475,12 +5487,12 @@ final: prev: symbols-outline-nvim = buildVimPluginFrom2Nix { pname = "symbols-outline.nvim"; - version = "2021-09-15"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "simrat39"; repo = "symbols-outline.nvim"; - rev = "a8cab53271c97ff6d2a0c18756d7b4e71012d41c"; - sha256 = "1nkc0qj4birsydd278hkkjyvkyi69gva367h8fpnk0ss2i621rcc"; + rev = "a56d5bdb0a3bf6b9cedf44654c3a132809793a4c"; + sha256 = "0lz8w8pjyjjjybsd7qgdh0br4ygixh563fk3w14sdsqyz86dy57l"; }; meta.homepage = "https://github.com/simrat39/symbols-outline.nvim/"; }; @@ -5572,12 +5584,12 @@ final: prev: tagbar = buildVimPluginFrom2Nix { pname = "tagbar"; - version = "2021-08-24"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "preservim"; repo = "tagbar"; - rev = "bb8ca482a5d14a771f718bd794b5945be3a6ff74"; - sha256 = "074dvmc7cnwqjx7dy8zsp6ikdzh9gxralf41vs17z8qr6pd4y7g0"; + rev = "b6669c7c9de542c53f2d19a806abb7610e9ef813"; + sha256 = "07nzjcp714g2jd9ys7md78yvxq2mz6s6yb06v1yxn5qfnlc7sjxk"; }; meta.homepage = "https://github.com/preservim/tagbar/"; }; @@ -5608,12 +5620,12 @@ final: prev: taskwiki = buildVimPluginFrom2Nix { pname = "taskwiki"; - version = "2021-09-21"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "tools-life"; repo = "taskwiki"; - rev = "70b33f336a0388c2d4fc72ecf7cab2245df580b8"; - sha256 = "1k3yh2ypzy6vwdvf1rrnswnpc9cqnjhvdsjal7yfqk2brvwawk46"; + rev = "c4392c36c01cfffcb06f460d722990b98bc53bdb"; + sha256 = "1z60rb7nbxmbjw8vbfb1f2dg0w7sfsp9923abjj5rs6qxym4bg22"; }; meta.homepage = "https://github.com/tools-life/taskwiki/"; }; @@ -5741,12 +5753,12 @@ final: prev: telescope-nvim = buildVimPluginFrom2Nix { pname = "telescope.nvim"; - version = "2021-09-20"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "nvim-telescope"; repo = "telescope.nvim"; - rev = "60660334c70d9d81dccc10a563e01920b9455e76"; - sha256 = "1ss1yrbsp4hnw7h1aqb7bkpd9p594r0g1906sgsmcglyjyc1zasc"; + rev = "4e629cdea197b7c4f3c476346a8841b74bf9fd56"; + sha256 = "0g7bkay3pj81rb5d91phfzcvs63xk9gqarax7nm7d7mcjncs570a"; }; meta.homepage = "https://github.com/nvim-telescope/telescope.nvim/"; }; @@ -6102,12 +6114,12 @@ final: prev: vifm-vim = buildVimPluginFrom2Nix { pname = "vifm.vim"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "vifm"; repo = "vifm.vim"; - rev = "858ef2d7a637b1c50c9266806473d895829d0775"; - sha256 = "1fbnhcxwic629nz49vp8qdxr164dqnlp7gfdb4qngj2j2mv6g44r"; + rev = "8cce1f208d8c26df3d3513a0f730dda70b201d48"; + sha256 = "18waprn9caa69r60hgs67g1wpclm03k1jzj4l68g98cky04b33in"; }; meta.homepage = "https://github.com/vifm/vifm.vim/"; }; @@ -6702,12 +6714,12 @@ final: prev: vim-clap = buildVimPluginFrom2Nix { pname = "vim-clap"; - version = "2021-09-20"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "liuchengxu"; repo = "vim-clap"; - rev = "e5490b568561d51ea41ccc72e3cef88f85c8968a"; - sha256 = "19r3kgr2ahfyvm7slf6qvyxbzjviiq6ckkrqnkws6pr0n3jz1irl"; + rev = "c0cb720b416d9641f37c11abd9bcc005cfe4d8cd"; + sha256 = "1zw9ygsmzs6n30vra8yxz2rglh5gm6zv81hvfrbvhmvw3cyz7yxf"; }; meta.homepage = "https://github.com/liuchengxu/vim-clap/"; }; @@ -7290,12 +7302,12 @@ final: prev: vim-erlang-runtime = buildVimPluginFrom2Nix { pname = "vim-erlang-runtime"; - version = "2021-09-06"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "vim-erlang"; repo = "vim-erlang-runtime"; - rev = "461717a931a7d985ac0ac8f4d856a7564b4d3f18"; - sha256 = "1axs13d5jz7vsckyl3v44vli096p991rp67gcvpis4isg609ld8f"; + rev = "f62fa7eb5c17e8fbf93d7dcc5ff593dc534fd44b"; + sha256 = "0h4n6r8zpwqlh635nqig8bisc6djq2by51nilra90i524lxw8fz5"; }; meta.homepage = "https://github.com/vim-erlang/vim-erlang-runtime/"; }; @@ -7506,12 +7518,12 @@ final: prev: vim-fugitive = buildVimPluginFrom2Nix { pname = "vim-fugitive"; - version = "2021-09-19"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-fugitive"; - rev = "e1d382b3e7e7491acea8546ef3bdfa9ce7e54fef"; - sha256 = "1y1iascskvqq08020c7ks8xhn0b4zrsxva326iaa3ypwhsjada94"; + rev = "7b05afd548bd5e3f45e61fee3defc024a762adfd"; + sha256 = "1w1rlzhbyjrwvq6d624js238lvsm319lhk103lwq9xzdg5za9lj2"; }; meta.homepage = "https://github.com/tpope/vim-fugitive/"; }; @@ -7530,12 +7542,12 @@ final: prev: vim-ghost = buildVimPluginFrom2Nix { pname = "vim-ghost"; - version = "2020-06-19"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "raghur"; repo = "vim-ghost"; - rev = "77330855a36350e75393cdeefb743da1040627ce"; - sha256 = "0g3wvp02cv69v7xcsbib35bw9yf36iq6ffny7lmaf0s1pj2kwpzz"; + rev = "115e2600481c92c0bfb69d82ccbd8af7dc052a03"; + sha256 = "15bpxhqdbs3sw2d3w1xa5l8yml67h1fjjqhf1m3zpplqy20kfbxh"; }; meta.homepage = "https://github.com/raghur/vim-ghost/"; }; @@ -8059,12 +8071,12 @@ final: prev: vim-javascript = buildVimPluginFrom2Nix { pname = "vim-javascript"; - version = "2021-05-23"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "pangloss"; repo = "vim-javascript"; - rev = "f8345cdb6734aefa5c0f9cb128c9efd005410a43"; - sha256 = "0s8bsfsjzc2djy2gvvf44g5ypsr7r3ax436xn0qpvhr58aa5m4dv"; + rev = "d6e137563c47fb59f26ed25d044c0c7532304f18"; + sha256 = "0pps9mqkkmmlqy0ir64gvwbz9jngcgvhy8d9hqb7bkps92ya6zr5"; }; meta.homepage = "https://github.com/pangloss/vim-javascript/"; }; @@ -8252,12 +8264,12 @@ final: prev: vim-ledger = buildVimPluginFrom2Nix { pname = "vim-ledger"; - version = "2021-03-06"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "ledger"; repo = "vim-ledger"; - rev = "96ec5f9a14211c3b1b2e4632c07df3a5fb68ef3b"; - sha256 = "0kawxaxahg7sdpkyp65k7gy6hqbfcs1hy8w8rzvi2h9kw4y8xkr7"; + rev = "5461c6911ee4d61d1f729c66cd3514905203be34"; + sha256 = "0k2l8z8qkjqj4swwzlc0mf1r77n1rxi5skxwlvvwcldx0gh0mv4r"; }; meta.homepage = "https://github.com/ledger/vim-ledger/"; }; @@ -8300,12 +8312,12 @@ final: prev: vim-liquid = buildVimPluginFrom2Nix { pname = "vim-liquid"; - version = "2021-07-22"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-liquid"; - rev = "447c69b59fadcf04f96d99873126953eae7aa235"; - sha256 = "0cglf4kfb07jwz1v14gl83rnfjm4c1b69nih3g7yj001ddyj5amx"; + rev = "dd5243a34e97c15e1a128b6ec440a0368e583900"; + sha256 = "0kn4w2i83fwhjcpmj1zym9hr4lvl27vcl0f1cz3n3lv3jhr7g7zg"; }; meta.homepage = "https://github.com/tpope/vim-liquid/"; }; @@ -8360,12 +8372,12 @@ final: prev: vim-lsp = buildVimPluginFrom2Nix { pname = "vim-lsp"; - version = "2021-09-07"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "prabirshrestha"; repo = "vim-lsp"; - rev = "14f9ab319ff96eea16ef6dbf57ed801c8fc8967e"; - sha256 = "04kj6q2kgl1m4l6z2v74c3mjab4rmi43ly2rpyvq4xqf25him10k"; + rev = "ee38eb1bc6c898fee0e980276a2d9d2104f014e4"; + sha256 = "0k9wy5aciibhjn9l9q4w75jlv764db86sn2pxjfvwiskcqwfny1g"; }; meta.homepage = "https://github.com/prabirshrestha/vim-lsp/"; }; @@ -8469,12 +8481,12 @@ final: prev: vim-matchup = buildVimPluginFrom2Nix { pname = "vim-matchup"; - version = "2021-09-20"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "andymass"; repo = "vim-matchup"; - rev = "daaa7dbde55d829dd456f458d90ae2ba98717ed2"; - sha256 = "1lqx3ixdf3l4pd4k2cbhxpsja66lm30bas4zciyxq5c9fgbpg091"; + rev = "35899fd1ed8e6a40708e3980cb15ac12d48bf067"; + sha256 = "1xnnldnqghb1vdls0lnzi710n7wgkf5wanyq4hhdizgqgsm6mwdp"; }; meta.homepage = "https://github.com/andymass/vim-matchup/"; }; @@ -8709,12 +8721,12 @@ final: prev: vim-ocaml = buildVimPluginFrom2Nix { pname = "vim-ocaml"; - version = "2021-09-20"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "ocaml"; repo = "vim-ocaml"; - rev = "d02e928db459d3c9e9727d990838caa70b83714a"; - sha256 = "0qqyr1r4sgbwylr2i1rpqkx9ww2im5nk3c2qai420ywp3y4hr8x5"; + rev = "71a92858d614e1682db36fc414ca54c7d7199a24"; + sha256 = "08q84zvj2mbkc0bxgyxzmkjd7j0jahbi4fhw5b2xjxdavi4f18n2"; }; meta.homepage = "https://github.com/ocaml/vim-ocaml/"; }; @@ -9561,12 +9573,12 @@ final: prev: vim-smt2 = buildVimPluginFrom2Nix { pname = "vim-smt2"; - version = "2021-06-07"; + version = "2021-09-25"; src = fetchFromGitHub { owner = "bohlender"; repo = "vim-smt2"; - rev = "2cc8c80c0a88e0d47de85bef1d50df86e197c302"; - sha256 = "0djk8s8q4b72blw73r4m7z9gc15gys167xgnvd1avmfyfw8fb22a"; + rev = "66d206292bd2e556bbf729ef808f0fffbab92c88"; + sha256 = "1431dk1ffcvgjj0zm4sj7z6csmw8hvmf05pxl5p45jj15xbqikzh"; }; meta.homepage = "https://github.com/bohlender/vim-smt2/"; }; @@ -9789,12 +9801,12 @@ final: prev: vim-tabpagecd = buildVimPluginFrom2Nix { pname = "vim-tabpagecd"; - version = "2013-11-29"; + version = "2021-09-23"; src = fetchFromGitHub { owner = "kana"; repo = "vim-tabpagecd"; - rev = "8b71a03a037608fa5918f5096812577cec6355e4"; - sha256 = "1mr6s2hvsf2a2nkjjvq78c9isfxk2k1ih890w740srbq6ssj0npm"; + rev = "5f647097d868318002de4d971ed446b8b44e4e90"; + sha256 = "1nbgjl7qbklh9d2xrlxcpmppp2408lcxm2lddiwdh4v38hqpka7s"; }; meta.homepage = "https://github.com/kana/vim-tabpagecd/"; }; @@ -9838,12 +9850,12 @@ final: prev: vim-test = buildVimPluginFrom2Nix { pname = "vim-test"; - version = "2021-09-15"; + version = "2021-09-24"; src = fetchFromGitHub { owner = "vim-test"; repo = "vim-test"; - rev = "bf200532aa8e2097af0f26e73b4f00c0cadb3118"; - sha256 = "1s6qqpj1iyrm2cxig3vhxmpb4mcg0d82j1ai7iz4r2rq008m2aqv"; + rev = "4a515c01a93254f920bcf7aeb7b3b61da2a7e041"; + sha256 = "062gfj4z3cd1hy951gn831ag4dv13gmq7shdd00w4q5nyjbkmf7d"; }; meta.homepage = "https://github.com/vim-test/vim-test/"; }; @@ -10006,12 +10018,12 @@ final: prev: vim-toml = buildVimPluginFrom2Nix { pname = "vim-toml"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "cespare"; repo = "vim-toml"; - rev = "9a05931018f4046179b76dec5b3932b48f3e3fb9"; - sha256 = "11ck5flydf48hpagl0v6ik6cd05il6jv57hixnhg7pzyrjp5q26y"; + rev = "8f40e6db284db7e893fceff64c62358862bceb88"; + sha256 = "1cna785z0y2w20psx43346vx03i2li7i1a1mf01x0a2qd557bw15"; }; meta.homepage = "https://github.com/cespare/vim-toml/"; }; @@ -10078,12 +10090,12 @@ final: prev: vim-ultest = buildVimPluginFrom2Nix { pname = "vim-ultest"; - version = "2021-08-18"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "rcarriga"; repo = "vim-ultest"; - rev = "416c58d00280c452f4c8c75866393394031fcb6b"; - sha256 = "0vm91shvwzq6x3llxjrprx2vimk73hkcdcmivbpkmvbsx0z33480"; + rev = "dfea06dc0e8da24338eef3414259055f360449cb"; + sha256 = "1h8g3pcwgjlm68rlzb0v9xwbgccklig68pd8i8g18bzw341b622b"; }; meta.homepage = "https://github.com/rcarriga/vim-ultest/"; }; @@ -10106,8 +10118,8 @@ final: prev: src = fetchFromGitHub { owner = "tpope"; repo = "vim-unimpaired"; - rev = "9cf8b258e444b393784c32d7560fff25b24c79d3"; - sha256 = "0bd9k8446163n8f5f3w3sxvx2s72b2mv0zjphkxxyhy9h7jycmz8"; + rev = "112e23a22ff41d090c2440aeaf12d2a6c5486bc6"; + sha256 = "05vc09g91c6zz37p6as3q1fm9c7ahvjih1jd607bhgbzys8342c7"; }; meta.homepage = "https://github.com/tpope/vim-unimpaired/"; }; @@ -10186,12 +10198,12 @@ final: prev: vim-vsnip-integ = buildVimPluginFrom2Nix { pname = "vim-vsnip-integ"; - version = "2021-09-19"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "hrsh7th"; repo = "vim-vsnip-integ"; - rev = "21c77665bd9d57416be2b6d11378347e163cfaa4"; - sha256 = "0wpscf9mavc7g1494c53bghh733db7v02lvqv2ggskjygz7v7ikc"; + rev = "c16628dd4b8f48eb22a597c9a5cba1a04ec3c41a"; + sha256 = "1p5fnjn8cxy4xkppml4bxnadz2zazprkn19b1drwdsk3kmfg625b"; }; meta.homepage = "https://github.com/hrsh7th/vim-vsnip-integ/"; }; @@ -10210,12 +10222,12 @@ final: prev: vim-wakatime = buildVimPluginFrom2Nix { pname = "vim-wakatime"; - version = "2021-09-09"; + version = "2021-09-27"; src = fetchFromGitHub { owner = "wakatime"; repo = "vim-wakatime"; - rev = "5ef2cc4c68af5d291ba85dc444ebb1b26158444c"; - sha256 = "1crzqn6g80kjhjsp9azh48xh9m5zcjr7vfazssh02sads02nppcw"; + rev = "a59c321ed5043ccbd47b3d00185890fa13035ce3"; + sha256 = "1ni6hdqiwswg1f5igqxikk18n45p1rabzahx9zwz9dzk2clrinfs"; }; meta.homepage = "https://github.com/wakatime/vim-wakatime/"; }; @@ -10246,12 +10258,12 @@ final: prev: vim-which-key = buildVimPluginFrom2Nix { pname = "vim-which-key"; - version = "2021-05-04"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "liuchengxu"; repo = "vim-which-key"; - rev = "da2934fcd36350b871ed8ccd54c8eae3a0dfc8ae"; - sha256 = "18n5mqwgkjsf67jg2r24d4w93hadg7fnqyvmqq6dd5bsmqwp9v14"; + rev = "2c915b6de918c073fbd83809e51343651f00f9a8"; + sha256 = "05jdjmpyczcgqsm5mznyb79bq10ianv7v3rhxy9wrklkama3jrgs"; }; meta.homepage = "https://github.com/liuchengxu/vim-which-key/"; }; @@ -10306,12 +10318,12 @@ final: prev: vim-xtabline = buildVimPluginFrom2Nix { pname = "vim-xtabline"; - version = "2021-08-13"; + version = "2021-09-22"; src = fetchFromGitHub { owner = "mg979"; repo = "vim-xtabline"; - rev = "9e1ee818616edc38a52dbc3956a3046393384d05"; - sha256 = "0j2z5mkdpfp6wzz7saqnpla0wmsr1c42gvjs0n2i4385phlg93vz"; + rev = "6ff20c655dd5b6f6050a234638d83ee7f65ba164"; + sha256 = "08mg6kcayp8m0vfcvk0afppslkszf7fjskb39b94df0sh7ymkw5p"; }; meta.homepage = "https://github.com/mg979/vim-xtabline/"; }; @@ -10354,12 +10366,12 @@ final: prev: vim_current_word = buildVimPluginFrom2Nix { pname = "vim_current_word"; - version = "2021-01-27"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "dominikduda"; repo = "vim_current_word"; - rev = "84ae9300de73cf878c805a6228a58d408b6b829d"; - sha256 = "0k0wq3aqrbwrqyfz36qdqzyq7cw16d34yvw0gvzyg7iany0z0r6r"; + rev = "5cfee50ec35d011478c4ec9805a0e5d9a92f09ea"; + sha256 = "0l543hg5wyrbqykbm8vvhcb8wq9gwkc8y4nq9f7qy5a2qssvvd31"; }; meta.homepage = "https://github.com/dominikduda/vim_current_word/"; }; @@ -10498,12 +10510,12 @@ final: prev: vimspector = buildVimPluginFrom2Nix { pname = "vimspector"; - version = "2021-09-21"; + version = "2021-09-28"; src = fetchFromGitHub { owner = "puremourning"; repo = "vimspector"; - rev = "eb782756ac46a1f09dfaa1664fae3b9722876b8a"; - sha256 = "08hcd0gai7hxs6632s3w4yp93kpvz0525rps68g0nyyr8blrlp0i"; + rev = "83741ac1abb2e3f9d4bc42f1ec3a06989c5ff379"; + sha256 = "0j61n112cn3szy0w1aq1xgrqfnhp38gzdj9rck9illqc4jy7gsaa"; fetchSubmodules = true; }; meta.homepage = "https://github.com/puremourning/vimspector/"; @@ -10511,12 +10523,12 @@ final: prev: vimtex = buildVimPluginFrom2Nix { pname = "vimtex"; - version = "2021-09-21"; + version = "2021-09-26"; src = fetchFromGitHub { owner = "lervag"; repo = "vimtex"; - rev = "562afdb82a58f105ae17c3e93e37ee233ae166a9"; - sha256 = "0nysplhi5yj7y4ngij284hp4g45f3qbf0fmssinhyl75miz102i4"; + rev = "fbe94cd3eaed89d6c1236af486466b1fcc3b82c9"; + sha256 = "0bffxnna70ah7cw6c58ih1a9rczvq4hjh44b4y3pj7v88i19w62i"; }; meta.homepage = "https://github.com/lervag/vimtex/"; }; diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names index 5f275b07fb7..29aa1604117 100644 --- a/pkgs/misc/vim-plugins/vim-plugin-names +++ b/pkgs/misc/vim-plugins/vim-plugin-names @@ -75,6 +75,7 @@ chriskempson/base16-vim ChristianChiarulli/nvcode-color-schemes.vim christoomey/vim-sort-motion christoomey/vim-tmux-navigator +ciaranm/inkpot ckarnell/antonys-macro-repeater clojure-vim/vim-jack-in cloudhead/neovim-fuzzy @@ -172,7 +173,6 @@ frigoeu/psc-ide-vim fruit-in/brainfuck-vim fruit-in/vim-nong-theme fsharp/vim-fsharp -fszymanski/deoplete-emoji garbas/vim-snipmate gcmt/taboo.vim gcmt/wildfire.vim @@ -644,7 +644,7 @@ rust-lang/rust.vim ryanoasis/vim-devicons ryvnf/readline.vim saadparwaiz1/cmp_luasnip -saecki/crates.nvim +saecki/crates.nvim@main sainnhe/edge sainnhe/gruvbox-material sainnhe/sonokai @@ -868,6 +868,7 @@ w0ng/vim-hybrid wakatime/vim-wakatime wannesm/wmgraphviz.vim wbthomason/packer.nvim +weilbith/nvim-code-action-menu@main wellle/targets.vim wellle/tmux-complete.vim wfxr/minimap.vim diff --git a/pkgs/misc/vim-plugins/vim-utils.nix b/pkgs/misc/vim-plugins/vim-utils.nix index 10295ab6b2b..60b9b60806d 100644 --- a/pkgs/misc/vim-plugins/vim-utils.nix +++ b/pkgs/misc/vim-plugins/vim-utils.nix @@ -399,6 +399,7 @@ in rec { inherit vimrcFile; inherit vimrcContent; + inherit packDir; # shell script with custom name passing [-u vimrc] [-U gvimrc] to vim vimWithRC = { diff --git a/pkgs/misc/vscode-extensions/default.nix b/pkgs/misc/vscode-extensions/default.nix index 768000d47b4..aca5641a2ae 100644 --- a/pkgs/misc/vscode-extensions/default.nix +++ b/pkgs/misc/vscode-extensions/default.nix @@ -8,6 +8,7 @@ , jdk , llvmPackages_8 , nixpkgs-fmt +, protobuf , jq , shellcheck , moreutils @@ -756,6 +757,18 @@ let }; }; + kamikillerto.vscode-colorize = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "vscode-colorize"; + publisher = "kamikillerto"; + version = "0.11.1"; + sha256 = "1h82b1jz86k2qznprng5066afinkrd7j3738a56idqr3vvvqnbsm"; + }; + meta = { + license = lib.licenses.asl20; + }; + }; + github = { copilot = buildVscodeMarketplaceExtension { mktplcRef = { @@ -1667,6 +1680,23 @@ let license = lib.licenses.mit; }; }; + + zxh404.vscode-proto3 = buildVscodeMarketplaceExtension { + mktplcRef = { + name = "vscode-proto3"; + publisher = "zxh404"; + version = "0.5.4"; + sha256 = "08dfl5h1k6s542qw5qx2czm1wb37ck9w2vpjz44kp2az352nmksb"; + }; + nativeBuildInputs = [ jq moreutils ]; + postInstall = '' + cd "$out/$installPrefix" + jq '.contributes.configuration.properties.protoc.properties.path.default = "${protobuf}/bin/protoc"' package.json | sponge package.json + ''; + meta = { + license = lib.licenses.mit; + }; + }; }; aliases = self: super: { diff --git a/pkgs/os-specific/linux/apfs/default.nix b/pkgs/os-specific/linux/apfs/default.nix index e27272a6147..62437d662b9 100644 --- a/pkgs/os-specific/linux/apfs/default.nix +++ b/pkgs/os-specific/linux/apfs/default.nix @@ -6,13 +6,13 @@ stdenv.mkDerivation { pname = "apfs"; - version = "unstable-2021-06-25-${kernel.version}"; + version = "unstable-2021-09-21-${kernel.version}"; src = fetchFromGitHub { owner = "linux-apfs"; repo = "linux-apfs-rw"; - rev = "2ce6d06dc73036d113da5166c59393233bf54229"; - sha256 = "sha256-18HFtPr0qcTIZ8njwEtveiPYO+HGlj90bdUoL47UUY0="; + rev = "362c4e32ab585b9234a26aa3e49f29b605612a31"; + sha256 = "sha256-Y8/PGPLirNrICF+Bum60v/DBPa1xpox5VBvt64myZzs="; }; hardeningDisable = [ "pic" ]; @@ -29,7 +29,7 @@ stdenv.mkDerivation { homepage = "https://github.com/linux-apfs/linux-apfs-rw"; license = licenses.gpl2Only; platforms = platforms.linux; - broken = kernel.kernelOlder "4.19"; + broken = kernel.kernelOlder "4.9"; maintainers = with maintainers; [ Luflosi ]; }; } diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json index 832e516e6ef..983a7df80dd 100644 --- a/pkgs/os-specific/linux/kernel/hardened/patches.json +++ b/pkgs/os-specific/linux/kernel/hardened/patches.json @@ -1,38 +1,32 @@ { "4.14": { "extra": "-hardened1", - "name": "linux-hardened-4.14.246-hardened1.patch", - "sha256": "1b15687ac2pkz46qliq1blyja7cjwn19q2bkd0c5912kzly76ghd", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.246-hardened1/linux-hardened-4.14.246-hardened1.patch" + "name": "linux-hardened-4.14.248-hardened1.patch", + "sha256": "1lwqlpd21f8rwqfyz61083w0lg2bjzdjf7rzrqxsw1jz0l879035", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.248-hardened1/linux-hardened-4.14.248-hardened1.patch" }, "4.19": { "extra": "-hardened1", - "name": "linux-hardened-4.19.206-hardened1.patch", - "sha256": "12ylhvjvabal29gi00cpjh3s47qj0vav6f2y145z4c9r2z77816k", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.206-hardened1/linux-hardened-4.19.206-hardened1.patch" + "name": "linux-hardened-4.19.208-hardened1.patch", + "sha256": "0bg45n1kgd628gwjkp1vxslxyci6589ygy9mmmhpl7kj3y7370ck", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.208-hardened1/linux-hardened-4.19.208-hardened1.patch" }, "5.10": { "extra": "-hardened1", - "name": "linux-hardened-5.10.67-hardened1.patch", - "sha256": "1yvfqkcffrva9hf4ns0jkksnvkj58h87msim0yhanlyp5jyz3l1p", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.10.67-hardened1/linux-hardened-5.10.67-hardened1.patch" - }, - "5.13": { - "extra": "-hardened1", - "name": "linux-hardened-5.13.19-hardened1.patch", - "sha256": "1cj99y2xn7l89lf4mn7arp0r98r4nmvql3ffjpngzv8hsf79xgg7", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.13.19-hardened1/linux-hardened-5.13.19-hardened1.patch" + "name": "linux-hardened-5.10.69-hardened1.patch", + "sha256": "11frhnprvxnqxm8yn1kay2jv2i473i9glnvsjnqz6kj8f0q2gl4v", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.10.69-hardened1/linux-hardened-5.10.69-hardened1.patch" }, "5.14": { "extra": "-hardened1", - "name": "linux-hardened-5.14.6-hardened1.patch", - "sha256": "0db5jvbvrk93x745ylxwnmx6ldwhmaqdnb2hfa35j0i2xjaw4hxx", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.14.6-hardened1/linux-hardened-5.14.6-hardened1.patch" + "name": "linux-hardened-5.14.8-hardened1.patch", + "sha256": "1kg02ixyd2dbk97iz28g26k1nnxi96s0bcyr90wc7diylhf7kz4a", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.14.8-hardened1/linux-hardened-5.14.8-hardened1.patch" }, "5.4": { "extra": "-hardened1", - "name": "linux-hardened-5.4.147-hardened1.patch", - "sha256": "1jkvfpckmj9ig4nsxxiigawkay05lk8r9fps16iaq6lz2mf9vqsb", - "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.147-hardened1/linux-hardened-5.4.147-hardened1.patch" + "name": "linux-hardened-5.4.149-hardened1.patch", + "sha256": "1v21dz66ngsdsdcld23rgmidz955x74al5nsxnvwasc5gh18ahh9", + "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.149-hardened1/linux-hardened-5.4.149-hardened1.patch" } } diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix index 4fd140a361c..01f51e8bc57 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "4.14.247"; + version = "4.14.248"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1kdhlsqpmw68xnfiyx98id8wis6kkxca2d4n7w2ncax0kyzrwyz7"; + sha256 = "0m5nsd41b08xppcf7vvx8zgj3h3sp3n6xrgxfkccn6n4bk7yx4y9"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.19.nix b/pkgs/os-specific/linux/kernel/linux-4.19.nix index ada819f4850..4148c9ecff5 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.19.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.19.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "4.19.207"; + version = "4.19.208"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1fb658n89xf9asnaqi0bnh64ir2f78bdqyjvfb983qad9wqsadym"; + sha256 = "1556bk46v7pjd2xrvkldq254yc18cn9jll25ba8zig57562ahkg7"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix index f1e4329c2d4..e2cae309230 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,12 +1,12 @@ { buildPackages, fetchurl, perl, buildLinux, nixosTests, stdenv, ... } @ args: buildLinux (args // rec { - version = "4.4.284"; + version = "4.4.285"; extraMeta.branch = "4.4"; extraMeta.broken = stdenv.isAarch64; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "00xkd2p181cfkys4nri93xy7snmn8g2481x3qz0js7g9p3kz5bqf"; + sha256 = "0h8jzb2cg0wg4s07iqkghfxkxrnlxadwk3i3gvg2xs3ra0wrisp1"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix index 22f506f5658..2225651f671 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,12 +1,12 @@ { buildPackages, fetchurl, perl, buildLinux, nixosTests, stdenv, ... } @ args: buildLinux (args // rec { - version = "4.9.283"; + version = "4.9.284"; extraMeta.branch = "4.9"; extraMeta.broken = stdenv.isAarch64; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0pdh1lyhdp5c5n39wpr622kgchgf30iqk853a2rv9m3s3fry50lm"; + sha256 = "0054b0cm0h2mbf6rxzdgd3c2rfz7xa32qkyr5lv58l2852hf0ri8"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-5.10.nix b/pkgs/os-specific/linux/kernel/linux-5.10.nix index 720b619049a..0f44d6b3e6a 100644 --- a/pkgs/os-specific/linux/kernel/linux-5.10.nix +++ b/pkgs/os-specific/linux/kernel/linux-5.10.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.10.68"; + version = "5.10.69"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "08cl4bg9k331apj5fjl3jx6s6l543dnbjc1cfvin951m7l787ahv"; + sha256 = "1jhcl8qh4w4m2jnbp0glr6xbpn7phv17q6w3d247djnc7g2rwbr3"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-5.13.nix b/pkgs/os-specific/linux/kernel/linux-5.13.nix deleted file mode 100644 index 3f5ae2e13f5..00000000000 --- a/pkgs/os-specific/linux/kernel/linux-5.13.nix +++ /dev/null @@ -1,18 +0,0 @@ -{ lib, buildPackages, fetchurl, perl, buildLinux, nixosTests, modDirVersionArg ? null, ... } @ args: - -with lib; - -buildLinux (args // rec { - version = "5.13.19"; - - # modDirVersion needs to be x.y.z, will automatically add .0 if needed - modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; - - # branchVersion needs to be x.y - extraMeta.branch = versions.majorMinor version; - - src = fetchurl { - url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "0yxbcd1k4l4cmdn0hzcck4s0yvhvq9fpwp120dv9cz4i9rrfqxz8"; - }; -} // (args.argsOverride or { })) diff --git a/pkgs/os-specific/linux/kernel/linux-5.14.nix b/pkgs/os-specific/linux/kernel/linux-5.14.nix index 45d39795db6..35e03223d31 100644 --- a/pkgs/os-specific/linux/kernel/linux-5.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-5.14.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.14.7"; + version = "5.14.8"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "1avypasvic298823xzpzzkjbmfv9s8bjnmq92ri62qbakx23j9dg"; + sha256 = "12cvvrxky92z1g9kj7pgb83yg9pnv2fvi7jf0pyagvqjqladl3na"; }; } // (args.argsOverride or { })) diff --git a/pkgs/os-specific/linux/kernel/linux-5.4.nix b/pkgs/os-specific/linux/kernel/linux-5.4.nix index ff4f019fc51..840a9dadbaf 100644 --- a/pkgs/os-specific/linux/kernel/linux-5.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-5.4.nix @@ -3,7 +3,7 @@ with lib; buildLinux (args // rec { - version = "5.4.148"; + version = "5.4.149"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; - sha256 = "1cwibh0y112hip5yd0n692rv44jh4sk2g6mj5n44g754k4i366a6"; + sha256 = "1s1zka0iay0drgkdnmzf587jbrg1gx13xv26k5r1qc7dik8xc6p7"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix index a12633eb6d7..b5c629e8509 100644 --- a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix +++ b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix @@ -9,7 +9,7 @@ , ... } @ args: -kernel.override ( args // { +(kernel.override ( args // { argsOverride = { version = "${kernel.version}-bcachefs-unstable-${date}"; @@ -30,4 +30,4 @@ kernel.override ( args // { extraConfig = "BCACHEFS_FS m"; } ] ++ kernelPatches; -}) +})).overrideAttrs ({ meta ? {}, ... }: { meta = meta // { broken = true; }; }) diff --git a/pkgs/os-specific/linux/kernel/linux-xanmod.nix b/pkgs/os-specific/linux/kernel/linux-xanmod.nix index 3c02140d135..4acb48479dd 100644 --- a/pkgs/os-specific/linux/kernel/linux-xanmod.nix +++ b/pkgs/os-specific/linux/kernel/linux-xanmod.nix @@ -1,7 +1,7 @@ { lib, stdenv, buildLinux, fetchFromGitHub, ... } @ args: let - version = "5.14.7"; + version = "5.14.8"; release = "1"; suffix = "xanmod${release}-cacule"; in @@ -13,7 +13,7 @@ buildLinux (args // rec { owner = "xanmod"; repo = "linux"; rev = modDirVersion; - sha256 = "sha256-W3NAiKMs5ZO/OesWzvfzGqgGa/5A49Gy0a8E4yWY2c8="; + sha256 = "sha256-ikASMx5Lbp2BUfjMppnT8Y0UZdKMWqTze78XYoUTeiU="; }; structuredExtraConfig = with lib.kernel; { diff --git a/pkgs/os-specific/linux/kernel/linux-zen.nix b/pkgs/os-specific/linux/kernel/linux-zen.nix index 1c064059047..df740845b6f 100644 --- a/pkgs/os-specific/linux/kernel/linux-zen.nix +++ b/pkgs/os-specific/linux/kernel/linux-zen.nix @@ -2,7 +2,7 @@ let # having the full version string here makes it easier to update - modDirVersion = "5.14.3-zen1"; + modDirVersion = "5.14.8-zen1"; parts = lib.splitString "-" modDirVersion; version = lib.elemAt parts 0; suffix = lib.elemAt parts 1; @@ -19,7 +19,7 @@ buildLinux (args // { owner = "zen-kernel"; repo = "zen-kernel"; rev = "v${modDirVersion}"; - sha256 = "sha256-ByewBT+1z83jCuEMmNvtmhHaEk4qjHa2Kgue8wVfPIY="; + sha256 = "sha256-hquMBDjP4fBMNdjxxnJJKx/oVNd2DwBPmVpZQeEQvHQ="; }; structuredExtraConfig = with lib.kernel; { diff --git a/pkgs/os-specific/linux/kernel/manual-config.nix b/pkgs/os-specific/linux/kernel/manual-config.nix index 12eca63e216..dc59a3f2610 100644 --- a/pkgs/os-specific/linux/kernel/manual-config.nix +++ b/pkgs/os-specific/linux/kernel/manual-config.nix @@ -318,10 +318,9 @@ stdenv.mkDerivation ((drvAttrs config stdenv.hostPlatform.linux-kernel kernelPat ++ optionals (lib.versionAtLeast version "4.16") [ bison flex ] ++ optionals (lib.versionAtLeast version "5.2") [ cpio pahole ] ++ optional (lib.versionAtLeast version "5.8") elfutils + ++ optional (lib.versionAtLeast version "5.2") zlib ; - buildInputs = optional (lib.versionAtLeast version "5.2") zlib; - hardeningDisable = [ "bindnow" "format" "fortify" "stackprotector" "pic" "pie" ]; # Absolute paths for compilers avoid any PATH-clobbering issues. diff --git a/pkgs/os-specific/linux/lm-sensors/default.nix b/pkgs/os-specific/linux/lm-sensors/default.nix index fda11400e8f..3590f87e37a 100644 --- a/pkgs/os-specific/linux/lm-sensors/default.nix +++ b/pkgs/os-specific/linux/lm-sensors/default.nix @@ -1,6 +1,7 @@ { lib , stdenv , fetchFromGitHub +, bash , bison , flex , which @@ -24,7 +25,8 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ bison flex which ]; - buildInputs = [ perl ] + # bash is required for correctly replacing the shebangs in all tools for cross-compilation. + buildInputs = [ bash perl ] ++ lib.optional sensord rrdtool; makeFlags = [ diff --git a/pkgs/os-specific/linux/mdevd/default.nix b/pkgs/os-specific/linux/mdevd/default.nix index 58299ba5e87..fe549e880a4 100644 --- a/pkgs/os-specific/linux/mdevd/default.nix +++ b/pkgs/os-specific/linux/mdevd/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "mdevd"; - version = "0.1.4.0"; - sha256 = "1lnwk7qa6x7iia0v12i2jckg42ypi35hk3sa7cjm23ngnhiv5lzz"; + version = "0.1.5.0"; + sha256 = "01ykxgnbm53wijdrbld10664xy2wkvyzbbs98mfnqnf4h1y064n0"; description = "mdev-compatible Linux hotplug manager daemon"; platforms = lib.platforms.linux; diff --git a/pkgs/os-specific/linux/s6-linux-init/default.nix b/pkgs/os-specific/linux/s6-linux-init/default.nix index f618fa7d8da..5d579c3ab2a 100644 --- a/pkgs/os-specific/linux/s6-linux-init/default.nix +++ b/pkgs/os-specific/linux/s6-linux-init/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-linux-init"; - version = "1.0.6.3"; - sha256 = "1idqjcxhl5wgff8yrsvx2812wahjri2hcs7qs6k62g0sdd8niqr9"; + version = "1.0.6.4"; + sha256 = "0grqk111d6aqym1c4l9j26fdqcgra1hvwb9vdgylrfbvn1c3hlpb"; description = "A set of minimalistic tools used to create a s6-based init system, including a /sbin/init binary, on a Linux kernel"; platforms = lib.platforms.linux; diff --git a/pkgs/os-specific/linux/s6-linux-utils/default.nix b/pkgs/os-specific/linux/s6-linux-utils/default.nix index 3596ab23e72..06a177f1cc6 100644 --- a/pkgs/os-specific/linux/s6-linux-utils/default.nix +++ b/pkgs/os-specific/linux/s6-linux-utils/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-linux-utils"; - version = "2.5.1.5"; - sha256 = "1fj5ldlrc6bx40pphg29rp3byd6fal6869v85kw86c2kdgrxn063"; + version = "2.5.1.6"; + sha256 = "0hr49nl0d7a6i5w8cfg43xzvzayb8kpqij9xg7bmw2fyvc2z338z"; description = "A set of minimalistic Linux-specific system utilities"; platforms = lib.platforms.linux; diff --git a/pkgs/os-specific/linux/sdnotify-wrapper/sdnotify-wrapper.c b/pkgs/os-specific/linux/sdnotify-wrapper/sdnotify-wrapper.c index bb71a732bf9..3ad3cbc6906 100644 --- a/pkgs/os-specific/linux/sdnotify-wrapper/sdnotify-wrapper.c +++ b/pkgs/os-specific/linux/sdnotify-wrapper/sdnotify-wrapper.c @@ -2,9 +2,9 @@ Copyright: (C)2015-2020 Laurent Bercot. http://skarnet.org/ ISC license. See http://opensource.org/licenses/ISC - Build-time requirements: skalibs. http://skarnet.org/software/skalibs/ + Build-time requirements: skalibs. https://skarnet.org/software/skalibs/ Run-time requirements: none, if you link skalibs statically. - + Compilation: gcc -o sdnotify-wrapper -L/usr/lib/skalibs sdnotify-wrapper.c -lskarnet Use /usr/lib/skalibs/libskarnet.a instead of -lskarnet to link statically. @@ -67,8 +67,6 @@ #include <skalibs/tai.h> #include <skalibs/iopause.h> #include <skalibs/djbunix.h> -//#include <skalibs/webipc.h> -// svanderburg: This header no longer exists, but socket.h provides the functions this module needs #include <skalibs/socket.h> #include <skalibs/exec.h> @@ -106,7 +104,7 @@ static inline int run_child (int fd, unsigned int timeout, pid_t pid, char const { char dummy[4096] ; iopause_fd x = { .fd = fd, .events = IOPAUSE_READ } ; - tain_t deadline ; + tain deadline ; tain_now_g() ; if (timeout) tain_from_millisecs(&deadline, timeout) ; else deadline = tain_infinite_relative ; @@ -135,7 +133,7 @@ int main (int argc, char const *const *argv) int df = 1, keep = 0 ; PROG = "sdnotify-wrapper" ; { - subgetopt_t l = SUBGETOPT_ZERO ; + subgetopt l = SUBGETOPT_ZERO ; for (;;) { int opt = subgetopt_r(argc, argv, "d:ft:k", &l) ; diff --git a/pkgs/os-specific/linux/sydbox/default.nix b/pkgs/os-specific/linux/sydbox/default.nix new file mode 100644 index 00000000000..bdaf77147f2 --- /dev/null +++ b/pkgs/os-specific/linux/sydbox/default.nix @@ -0,0 +1,77 @@ +{ lib +, stdenv +, fetchurl +, pkg-config +, autoreconfHook +, python3 +, perl +, libxslt +, docbook_xsl +, docbook_xml_dtd_42 +, libseccomp +, installTests ? true, gnumake, which +, debugBuild ? false, libunwind +}: + +stdenv.mkDerivation rec { + pname = "sydbox-1"; + version = "2.2.0"; + + outputs = [ "out" "dev" "man" "doc" ] + ++ lib.optional installTests "installedTests"; + + src = fetchurl { + url = "https://git.exherbo.org/${pname}.git/snapshot/${pname}-${version}.tar.xz"; + sha256 = "0664myrrzbvsw73q5b7cqwgv4hl9a7vkm642s1r96gaxm16jk0z7"; + }; + + nativeBuildInputs = [ + pkg-config + autoreconfHook + python3 + perl + libxslt.bin + docbook_xsl + docbook_xml_dtd_42 + ]; + + buildInputs = [ + libseccomp + ] ++ lib.optional debugBuild libunwind + ++ lib.optionals installTests [ + gnumake + python3 + perl + which + ]; + + enableParallelBuilding = true; + + configureFlags = [ ] + ++ lib.optionals installTests [ "--enable-installed-tests" + "--libexecdir=${placeholder "installedTests"}/libexec" ] + ++ lib.optional debugBuild "--enable-debug"; + + makeFlags = [ "SYD_INCLUDEDIR=${stdenv.cc.libc.dev}/include" ]; + + doCheck = true; + checkPhase = '' + # Many of the regular test cases in t/ do not work inside the build sandbox + make -C syd check + ''; + + postInstall = if installTests then '' + moveToOutput bin/syd-test $installedTests + '' else '' + # Tests are installed despite --disable-installed-tests + rm -r $out/bin/syd-test $out/libexec + ''; + + meta = with lib; { + homepage = "https://sydbox.exherbo.org/"; + description = "seccomp-based application sandbox"; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ mvs ]; + }; +} diff --git a/pkgs/os-specific/linux/system76-acpi/default.nix b/pkgs/os-specific/linux/system76-acpi/default.nix index f642fad6978..b384cf63948 100644 --- a/pkgs/os-specific/linux/system76-acpi/default.nix +++ b/pkgs/os-specific/linux/system76-acpi/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitHub, kernel }: let - version = "1.0.1"; - sha256 = "0jmm9h607f7k20yassm6af9mh5l00yih5248wwv4i05bd68yw3p5"; + version = "1.0.2"; + sha256 = "1i7zjn5cdv9h00fgjg46b8yrz4d3dqvfr25g3f13967ycy58m48h"; in stdenv.mkDerivation { name = "system76-acpi-module-${version}-${kernel.version}"; @@ -33,7 +33,7 @@ stdenv.mkDerivation { maintainers = [ maintainers.khumba ]; license = [ licenses.gpl2Only ]; platforms = [ "i686-linux" "x86_64-linux" ]; - broken = versionOlder kernel.version "4.14"; + broken = kernel.kernelOlder "5.2"; description = "System76 ACPI Driver (DKMS)"; homepage = "https://github.com/pop-os/system76-acpi-dkms"; longDescription = '' diff --git a/pkgs/os-specific/linux/system76-power/default.nix b/pkgs/os-specific/linux/system76-power/default.nix index fbc26ca8719..38ce20deeab 100644 --- a/pkgs/os-specific/linux/system76-power/default.nix +++ b/pkgs/os-specific/linux/system76-power/default.nix @@ -2,19 +2,19 @@ rustPlatform.buildRustPackage rec { pname = "system76-power"; - version = "1.1.16"; + version = "1.1.17"; src = fetchFromGitHub { owner = "pop-os"; repo = "system76-power"; rev = version; - sha256 = "sha256-OtrhvUkNNgg6KlrqjwiBKL4zuQZBWevb0xgtSlEW2rQ="; + sha256 = "sha256-9ndukZPNB0qtU0hA9eUYpiAC8Tw1eF16W+sVU7XKvsg="; }; nativeBuildInputs = [ pkg-config ]; buildInputs = [ dbus libusb1 ]; - cargoSha256 = "sha256-ImACDbnUbwc0ZXgF3xxzes8+vUjt76B1xxgqzhgAYX4="; + cargoSha256 = "sha256-6mtBY77d2WAwTpj+g0KVpW/n39uanAL2GNHWC8Qbtqk="; postInstall = '' install -D -m 0644 data/system76-power.conf $out/etc/dbus-1/system.d/system76-power.conf diff --git a/pkgs/os-specific/linux/system76/default.nix b/pkgs/os-specific/linux/system76/default.nix index 84c153c2f82..aa0ff0331ff 100644 --- a/pkgs/os-specific/linux/system76/default.nix +++ b/pkgs/os-specific/linux/system76/default.nix @@ -1,7 +1,7 @@ { lib, stdenv, fetchFromGitHub, kernel }: let - version = "1.0.9"; - sha256 = "0i4825y2vd679kdjv30ifzj1i1066d3x37z4lgk39hx16993k162"; + version = "1.0.12"; + sha256 = "0k098zkxa8spj5rbmzpndxs0cf5i2n22g3ym6kq4j43kvs18x6c7"; in stdenv.mkDerivation { name = "system76-module-${version}-${kernel.version}"; diff --git a/pkgs/os-specific/linux/wpa_supplicant/default.nix b/pkgs/os-specific/linux/wpa_supplicant/default.nix index 1dbe281e096..656fa477768 100644 --- a/pkgs/os-specific/linux/wpa_supplicant/default.nix +++ b/pkgs/os-specific/linux/wpa_supplicant/default.nix @@ -1,4 +1,5 @@ { lib, stdenv, fetchurl, fetchpatch, openssl, pkg-config, libnl +, nixosTests , withDbus ? true, dbus , withReadline ? true, readline , withPcsclite ? true, pcsclite @@ -139,6 +140,10 @@ stdenv.mkDerivation rec { install -Dm444 wpa_supplicant.conf $out/share/doc/wpa_supplicant/wpa_supplicant.conf.example ''; + passthru.tests = { + inherit (nixosTests) wpa_supplicant; + }; + meta = with lib; { homepage = "https://w1.fi/wpa_supplicant/"; description = "A tool for connecting to WPA and WPA2-protected wireless networks"; diff --git a/pkgs/servers/amqp/rabbitmq-server/default.nix b/pkgs/servers/amqp/rabbitmq-server/default.nix index 33541da86b2..357fbe36b20 100644 --- a/pkgs/servers/amqp/rabbitmq-server/default.nix +++ b/pkgs/servers/amqp/rabbitmq-server/default.nix @@ -27,12 +27,12 @@ stdenv.mkDerivation rec { pname = "rabbitmq-server"; - version = "3.9.4"; + version = "3.9.6"; # when updating, consider bumping elixir version in all-packages.nix src = fetchurl { url = "https://github.com/rabbitmq/rabbitmq-server/releases/download/v${version}/${pname}-${version}.tar.xz"; - sha256 = "sha256-L2ftgdk7QmWl3iQR52G4SwZyI4NURybVMQ1WtcHPvHE="; + sha256 = "sha256-YCVOMVsbOMczpZi02Ywd6M+AXrd5AMweCYn1WcyRHSw="; }; nativeBuildInputs = [ unzip xmlto docbook_xml_dtd_45 docbook_xsl zip rsync ]; diff --git a/pkgs/servers/dex/default.nix b/pkgs/servers/dex/default.nix index 0f4282699ee..16dc5f8bafd 100644 --- a/pkgs/servers/dex/default.nix +++ b/pkgs/servers/dex/default.nix @@ -1,17 +1,17 @@ -{ lib, buildGoModule, fetchFromGitHub }: +{ lib, buildGoModule, fetchFromGitHub, nixosTests }: buildGoModule rec { pname = "dex"; - version = "2.28.1"; + version = "2.30.0"; src = fetchFromGitHub { owner = "dexidp"; repo = pname; rev = "v${version}"; - sha256 = "sha256-MdrkQ4qclylkan8y845BjLiL+W16iqRuNMmvWsKo+zw="; + sha256 = "sha256-Z/X9Db57eNUJdjzLCJNIW3lCRw05JP2TQ43PqKO6CiI="; }; - vendorSha256 = "sha256-rAqqvnP72BQY/qbSvqNzxh2ZUlF/rP0MR/+yqJai+KY="; + vendorSha256 = "sha256-ksN/1boBQVhevlDseVZsGUWL+Bwy4AMgGNdOPgsNNxk="; subPackages = [ "cmd/dex" @@ -26,6 +26,8 @@ buildGoModule rec { cp -r $src/web $out/share/web ''; + passthru.tests = { inherit (nixosTests) dex-oidc; }; + meta = with lib; { description = "OpenID Connect and OAuth2 identity provider with pluggable connectors"; homepage = "https://github.com/dexidp/dex"; diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix index b1363880f9f..c9e77c91416 100644 --- a/pkgs/servers/home-assistant/component-packages.nix +++ b/pkgs/servers/home-assistant/component-packages.nix @@ -188,7 +188,7 @@ "dlna_dmr" = ps: with ps; [ aiohttp-cors async-upnp-client ifaddr ]; "dnsip" = ps: with ps; [ aiodns ]; "dominos" = ps: with ps; [ aiohttp-cors ]; # missing inputs: pizzapi - "doods" = ps: with ps; [ pillow ]; # missing inputs: pydoods + "doods" = ps: with ps; [ pillow pydoods ]; "doorbird" = ps: with ps; [ aiohttp-cors doorbirdpy ]; "dovado" = ps: with ps; [ ]; # missing inputs: dovado "downloader" = ps: with ps; [ ]; @@ -218,7 +218,7 @@ "eight_sleep" = ps: with ps; [ pyeight ]; "elgato" = ps: with ps; [ elgato ]; "eliqonline" = ps: with ps; [ ]; # missing inputs: eliqonline - "elkm1" = ps: with ps; [ ]; # missing inputs: elkm1-lib + "elkm1" = ps: with ps; [ elkm1-lib ]; "elv" = ps: with ps; [ pypca ]; "emby" = ps: with ps; [ pyemby ]; "emoncms" = ps: with ps; [ ]; @@ -272,7 +272,7 @@ "flexit" = ps: with ps; [ pymodbus ]; "flic" = ps: with ps; [ pyflic ]; "flick_electric" = ps: with ps; [ pyflick ]; - "flipr" = ps: with ps; [ ]; # missing inputs: flipr-api + "flipr" = ps: with ps; [ flipr-api ]; "flo" = ps: with ps; [ aioflo ]; "flock" = ps: with ps; [ ]; "flume" = ps: with ps; [ pyflume ]; @@ -380,7 +380,7 @@ "hue" = ps: with ps; [ aiohue ]; "huisbaasje" = ps: with ps; [ huisbaasje-client ]; "humidifier" = ps: with ps; [ ]; - "hunterdouglas_powerview" = ps: with ps; [ ]; # missing inputs: aiopvapi + "hunterdouglas_powerview" = ps: with ps; [ aiopvapi ]; "hvv_departures" = ps: with ps; [ pygti ]; "hydrawise" = ps: with ps; [ hydrawiser ]; "hyperion" = ps: with ps; [ hyperion-py ]; @@ -411,7 +411,7 @@ "intesishome" = ps: with ps; [ pyintesishome ]; "ios" = ps: with ps; [ aiohttp-cors ifaddr zeroconf ]; "iota" = ps: with ps; [ ]; # missing inputs: pyota - "iotawatt" = ps: with ps; [ ]; # missing inputs: iotawattpy + "iotawatt" = ps: with ps; [ iotawattpy ]; "iperf3" = ps: with ps; [ ]; # missing inputs: iperf3 "ipma" = ps: with ps; [ pyipma ]; "ipp" = ps: with ps; [ pyipp ]; @@ -478,7 +478,7 @@ "lovelace" = ps: with ps; [ ]; "luci" = ps: with ps; [ openwrt-luci-rpc ]; "luftdaten" = ps: with ps; [ luftdaten ]; - "lupusec" = ps: with ps; [ ]; # missing inputs: lupupy + "lupusec" = ps: with ps; [ lupupy ]; "lutron" = ps: with ps; [ pylutron ]; "lutron_caseta" = ps: with ps; [ aiolip pylutron-caseta ]; "lw12wifi" = ps: with ps; [ ]; # missing inputs: lw12 @@ -558,13 +558,13 @@ "nanoleaf" = ps: with ps; [ pynanoleaf ]; "neato" = ps: with ps; [ aiohttp-cors pybotvac ]; "nederlandse_spoorwegen" = ps: with ps; [ nsapi ]; - "nello" = ps: with ps; [ ]; # missing inputs: pynello + "nello" = ps: with ps; [ pynello ]; "ness_alarm" = ps: with ps; [ ]; # missing inputs: nessclient "nest" = ps: with ps; [ aiohttp-cors ha-ffmpeg python-nest ]; # missing inputs: google-nest-sdm "netatmo" = ps: with ps; [ pyturbojpeg aiohttp-cors hass-nabucasa pyatmo ]; "netdata" = ps: with ps; [ netdata ]; "netgear" = ps: with ps; [ ]; # missing inputs: pynetgear - "netgear_lte" = ps: with ps; [ ]; # missing inputs: eternalegypt + "netgear_lte" = ps: with ps; [ eternalegypt ]; "netio" = ps: with ps; [ aiohttp-cors ]; # missing inputs: pynetio "network" = ps: with ps; [ aiohttp-cors ifaddr ]; "neurio_energy" = ps: with ps; [ ]; # missing inputs: neurio @@ -574,7 +574,7 @@ "nfandroidtv" = ps: with ps; [ ]; # missing inputs: notifications-android-tv "nightscout" = ps: with ps; [ ]; # missing inputs: py-nightscout "niko_home_control" = ps: with ps; [ ]; # missing inputs: niko-home-control - "nilu" = ps: with ps; [ ]; # missing inputs: niluclient + "nilu" = ps: with ps; [ niluclient ]; "nissan_leaf" = ps: with ps; [ ]; # missing inputs: pycarwings2 "nmap_tracker" = ps: with ps; [ aiohttp-cors getmac ifaddr netmap ]; # missing inputs: mac-vendor-lookup "nmbs" = ps: with ps; [ ]; # missing inputs: pyrail @@ -599,7 +599,7 @@ "octoprint" = ps: with ps; [ aiohttp-cors ifaddr netdisco zeroconf ]; "oem" = ps: with ps; [ ]; # missing inputs: oemthermostat "ohmconnect" = ps: with ps; [ defusedxml ]; - "ombi" = ps: with ps; [ ]; # missing inputs: pyombi + "ombi" = ps: with ps; [ pyombi ]; "omnilogic" = ps: with ps; [ omnilogic ]; "onboarding" = ps: with ps; [ aiohttp-cors home-assistant-frontend pillow sqlalchemy ]; "ondilo_ico" = ps: with ps; [ aiohttp-cors ondilo ]; @@ -630,7 +630,7 @@ "ovo_energy" = ps: with ps; [ ovoenergy ]; "owntracks" = ps: with ps; [ pynacl pyturbojpeg aiohttp-cors hass-nabucasa paho-mqtt ]; "ozw" = ps: with ps; [ aiohttp-cors paho-mqtt python-openzwave-mqtt ]; - "p1_monitor" = ps: with ps; [ ]; # missing inputs: p1monitor + "p1_monitor" = ps: with ps; [ p1monitor ]; "panasonic_bluray" = ps: with ps; [ ]; # missing inputs: panacotta "panasonic_viera" = ps: with ps; [ ]; # missing inputs: panasonic_viera "pandora" = ps: with ps; [ pexpect ]; @@ -703,7 +703,7 @@ "remember_the_milk" = ps: with ps; [ httplib2 ]; # missing inputs: RtmAPI "remote" = ps: with ps; [ ]; "remote_rpi_gpio" = ps: with ps; [ ]; # missing inputs: gpiozero - "renault" = ps: with ps; [ ]; # missing inputs: renault-api + "renault" = ps: with ps; [ renault-api ]; "repetier" = ps: with ps; [ ]; # missing inputs: pyrepetier "rest" = ps: with ps; [ jsonpath xmltodict ]; "rest_command" = ps: with ps; [ ]; @@ -803,10 +803,10 @@ "sonarr" = ps: with ps; [ sonarr ]; "songpal" = ps: with ps; [ python-songpal ]; "sonos" = ps: with ps; [ aiohttp-cors async-upnp-client defusedxml ifaddr plexapi plexauth plexwebsocket soco zeroconf ]; - "sony_projector" = ps: with ps; [ ]; # missing inputs: pysdcp + "sony_projector" = ps: with ps; [ pysdcp ]; "soundtouch" = ps: with ps; [ aiohttp-cors ifaddr libsoundtouch zeroconf ]; "spaceapi" = ps: with ps; [ aiohttp-cors ]; - "spc" = ps: with ps; [ ]; # missing inputs: pyspcwebgw + "spc" = ps: with ps; [ pyspcwebgw ]; "speedtestdotnet" = ps: with ps; [ speedtest-cli ]; "spider" = ps: with ps; [ spiderpy ]; "splunk" = ps: with ps; [ ]; # missing inputs: hass_splunk @@ -824,7 +824,7 @@ "stiebel_eltron" = ps: with ps; [ pymodbus ]; # missing inputs: pystiebeleltron "stookalert" = ps: with ps; [ ]; # missing inputs: stookalert "stream" = ps: with ps; [ aiohttp-cors av ]; - "streamlabswater" = ps: with ps; [ ]; # missing inputs: streamlabswater + "streamlabswater" = ps: with ps; [ streamlabswater ]; "stt" = ps: with ps; [ aiohttp-cors ]; "subaru" = ps: with ps; [ subarulink ]; "suez_water" = ps: with ps; [ ]; # missing inputs: pysuez diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix index 27c34e10e38..0239fb12e05 100644 --- a/pkgs/servers/home-assistant/default.nix +++ b/pkgs/servers/home-assistant/default.nix @@ -177,7 +177,8 @@ in with py.pkgs; buildPythonApplication rec { --replace "cryptography==3.3.2" "cryptography" \ --replace "pip>=8.0.3,<20.3" "pip" \ --replace "requests==2.25.1" "requests>=2.25.1" \ - --replace "ruamel.yaml==0.15.100" "ruamel.yaml" + --replace "ruamel.yaml==0.15.100" "ruamel.yaml" \ + --replace "voluptuous==0.12.1" "voluptuous==0.12.2" substituteInPlace tests/test_config.py --replace '"/usr"' '"/build/media"' ''; @@ -338,6 +339,7 @@ in with py.pkgs; buildPythonApplication rec { "ee_brightbox" "efergy" "elgato" + "elkm1" "emonitor" "emulated_hue" "emulated_kasa" @@ -362,6 +364,7 @@ in with py.pkgs; buildPythonApplication rec { "fireservicerota" "firmata" "flick_electric" + "flipr" "flo" "flume" "flunearyou" @@ -430,6 +433,7 @@ in with py.pkgs; buildPythonApplication rec { "hue" "huisbaasje" "humidifier" + "hunterdouglas_powerview" "hvv_departures" "hyperion" "ialarm" @@ -545,6 +549,7 @@ in with py.pkgs; buildPythonApplication rec { "ovo_energy" "owntracks" "ozw" + "p1_monitor" "panel_custom" "panel_iframe" "persistent_notification" @@ -575,6 +580,7 @@ in with py.pkgs; buildPythonApplication rec { "recorder" "reddit" "remote" + "renault" "rest" "rest_command" "rflink" @@ -628,6 +634,7 @@ in with py.pkgs; buildPythonApplication rec { # "sonos" "soundtouch" "spaceapi" + "spc" "speedtestdotnet" "spider" "spotify" diff --git a/pkgs/servers/http/lighttpd/default.nix b/pkgs/servers/http/lighttpd/default.nix index 98e378b2eed..4f98e3c7dab 100644 --- a/pkgs/servers/http/lighttpd/default.nix +++ b/pkgs/servers/http/lighttpd/default.nix @@ -1,19 +1,16 @@ { lib, stdenv, buildPackages, fetchurl, pkg-config, pcre, libxml2, zlib, bzip2, which, file -, openssl, enableMagnet ? false, lua5_1 ? null -, enableMysql ? false, libmysqlclient ? null -, enableLdap ? false, openldap ? null -, enableWebDAV ? false, sqlite ? null, libuuid ? null -, enableExtendedAttrs ? false, attr ? null +, openssl +, enableDbi ? false, libdbi +, enableMagnet ? false, lua5_1 +, enableMysql ? false, libmysqlclient +, enableLdap ? false, openldap +, enablePam ? false, linux-pam +, enableSasl ? false, cyrus_sasl +, enableWebDAV ? false, sqlite, libuuid +, enableExtendedAttrs ? false, attr , perl }: -assert enableMagnet -> lua5_1 != null; -assert enableMysql -> libmysqlclient != null; -assert enableLdap -> openldap != null; -assert enableWebDAV -> sqlite != null; -assert enableWebDAV -> libuuid != null; -assert enableExtendedAttrs -> attr != null; - stdenv.mkDerivation rec { pname = "lighttpd"; version = "1.4.59"; @@ -33,16 +30,22 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkg-config ]; buildInputs = [ pcre pcre.dev libxml2 zlib bzip2 which file openssl ] + ++ lib.optional enableDbi libdbi ++ lib.optional enableMagnet lua5_1 ++ lib.optional enableMysql libmysqlclient ++ lib.optional enableLdap openldap + ++ lib.optional enablePam linux-pam + ++ lib.optional enableSasl cyrus_sasl ++ lib.optional enableWebDAV sqlite ++ lib.optional enableWebDAV libuuid; configureFlags = [ "--with-openssl" ] + ++ lib.optional enableDbi "--with-dbi" ++ lib.optional enableMagnet "--with-lua" ++ lib.optional enableMysql "--with-mysql" ++ lib.optional enableLdap "--with-ldap" + ++ lib.optional enablePam "--with-pam" + ++ lib.optional enableSasl "--with-sasl" ++ lib.optional enableWebDAV "--with-webdav-props" ++ lib.optional enableWebDAV "--with-webdav-locks" ++ lib.optional enableExtendedAttrs "--with-attr"; @@ -69,6 +72,6 @@ stdenv.mkDerivation rec { homepage = "http://www.lighttpd.net/"; license = lib.licenses.bsd3; platforms = platforms.linux ++ platforms.darwin; - maintainers = [ maintainers.bjornfor ]; + maintainers = with maintainers; [ bjornfor brecht ]; }; } diff --git a/pkgs/servers/http/openresty/default.nix b/pkgs/servers/http/openresty/default.nix index 71490b34280..3c30b2c3ed0 100644 --- a/pkgs/servers/http/openresty/default.nix +++ b/pkgs/servers/http/openresty/default.nix @@ -8,12 +8,12 @@ callPackage ../nginx/generic.nix args rec { pname = "openresty"; - nginxVersion = "1.19.3"; - version = "${nginxVersion}.2"; + nginxVersion = "1.19.9"; + version = "${nginxVersion}.1"; src = fetchurl { url = "https://openresty.org/download/openresty-${version}.tar.gz"; - sha256 = "1fav3qykckqcyw9ksi8s61prpwab44zbcvj95rwfpfqgk5jffh6f"; + sha256 = "1xn1d0x2y63z0mi0qq3js6lz6ziba92r7vyyfkj1qc738vjz8vsp"; }; # generic.nix applies fixPatch on top of every patch defined there. This diff --git a/pkgs/servers/monitoring/prometheus/fastly-exporter.nix b/pkgs/servers/monitoring/prometheus/fastly-exporter.nix new file mode 100644 index 00000000000..cffdca4083c --- /dev/null +++ b/pkgs/servers/monitoring/prometheus/fastly-exporter.nix @@ -0,0 +1,22 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "fastly-exporter"; + version = "6.1.0"; + + src = fetchFromGitHub { + owner = "peterbourgon"; + repo = pname; + rev = "v${version}"; + sha256 = "0my0pcxix5rk73m5ciz513nwmjcm7vjs6r8wg3vddm0xixv7zq94"; + }; + + vendorSha256 = "1w9asky8h8l5gc0c6cv89m38qw50hyhma8qbsw3zirplhk9mb3r2"; + + meta = with lib; { + description = "Prometheus exporter for the Fastly Real-time Analytics API"; + homepage = "https://github.com/peterbourgon/fastly-exporter"; + license = licenses.asl20; + maintainers = teams.deshaw.members; + }; +} diff --git a/pkgs/servers/monitoring/zabbix/server.nix b/pkgs/servers/monitoring/zabbix/server.nix index 03e9c1a867b..474cf82f7c1 100644 --- a/pkgs/servers/monitoring/zabbix/server.nix +++ b/pkgs/servers/monitoring/zabbix/server.nix @@ -6,6 +6,7 @@ , sshSupport ? true, libssh2 , mysqlSupport ? false, libmysqlclient , postgresqlSupport ? false, postgresql +, ipmiSupport ? false, openipmi }: # ensure exactly one primary database type is selected @@ -41,7 +42,8 @@ in ++ optional snmpSupport net-snmp ++ optional sshSupport libssh2 ++ optional mysqlSupport libmysqlclient - ++ optional postgresqlSupport postgresql; + ++ optional postgresqlSupport postgresql + ++ optional ipmiSupport openipmi; configureFlags = [ "--enable-server" @@ -59,7 +61,8 @@ in ++ optional snmpSupport "--with-net-snmp" ++ optional sshSupport "--with-ssh2=${libssh2.dev}" ++ optional mysqlSupport "--with-mysql" - ++ optional postgresqlSupport "--with-postgresql"; + ++ optional postgresqlSupport "--with-postgresql" + ++ optional ipmiSupport "--with-openipmi=${openipmi.dev}"; prePatch = '' find database -name data.sql -exec sed -i 's|/usr/bin/||g' {} + diff --git a/pkgs/servers/owncast/default.nix b/pkgs/servers/owncast/default.nix new file mode 100644 index 00000000000..65fa8a0f22e --- /dev/null +++ b/pkgs/servers/owncast/default.nix @@ -0,0 +1,58 @@ +{ lib, buildGoModule, fetchFromGitHub, nixosTests, bash, which, ffmpeg, makeWrapper, coreutils, ... }: + +buildGoModule rec { + pname = "owncast"; + version = "0.0.9"; + + src = fetchFromGitHub { + owner = "owncast"; + repo = "owncast"; + rev = "v${version}"; + sha256 = "sha256-pJb11ifaiamp7P7d/xCwDKfOFufLmDDroUJPnWlTOkI="; + }; + + vendorSha256 = "sha256-NARHYeOVT7sxfL1BdJc/CPCgHNZzjWE7kACJvrEC71Y="; + + propagatedBuildInputs = [ ffmpeg ]; + + buildInputs = [ makeWrapper ]; + + preInstall = '' + mkdir -p $out + cp -r $src/{static,webroot} $out + ''; + + postInstall = let + + setupScript = '' + [ ! -d "$PWD/webroot" ] && ( + ${coreutils}/bin/cp --no-preserve=mode -r "${placeholder "out"}/webroot" "$PWD" + ) + + [ ! -d "$PWD/static" ] && ( + ${coreutils}/bin/ln -s "${placeholder "out"}/static" "$PWD" + ) + ''; + in '' + wrapProgram $out/bin/owncast \ + --run '${setupScript}' \ + --prefix PATH : ${lib.makeBinPath [ bash which ffmpeg ]} + ''; + + installCheckPhase = '' + runHook preCheck + $out/bin/owncast --help + runHook postCheck + ''; + + passthru.tests.owncast = nixosTests.testOwncast; + + meta = with lib; { + description = "self-hosted video live streaming solution"; + homepage = "https://owncast.online"; + license = licenses.mit; + platforms = platforms.unix; + maintainers = with maintainers; [ MayNiklas ]; + }; + +} diff --git a/pkgs/servers/roon-bridge/default.nix b/pkgs/servers/roon-bridge/default.nix index 74851446c99..14161b5d5a3 100644 --- a/pkgs/servers/roon-bridge/default.nix +++ b/pkgs/servers/roon-bridge/default.nix @@ -15,20 +15,20 @@ stdenv.mkDerivation rec { pname = "roon-bridge"; version = "1.8-814"; - # N.B. The URL is unstable. I've asked for them to provide a stable URL but - # they have ignored me. If this package fails to build for you, you may need - # to update the version and sha256. - # c.f. https://community.roonlabs.com/t/latest-roon-server-is-not-available-for-download-on-nixos/118129 - src = { - x86_64-linux = fetchurl { - url = "https://web.archive.org/web/20210729154257/http://download.roonlabs.com/builds/RoonBridge_linuxx64.tar.bz2"; - sha256 = "sha256-dersaP/8qkl9k81FrgMieB0P4nKmDwjLW5poqKhEn7A="; - }; - aarch64-linux = fetchurl { - url = "https://web.archive.org/web/20210803071334/http://download.roonlabs.com/builds/RoonBridge_linuxarmv8.tar.bz2"; - sha256 = "sha256-zZj7PkLUYYHo3dngqErv1RqynSXi6/D5VPZWfrppX5U="; - }; - }.${system} or throwSystem; + src = + let + urlVersion = builtins.replaceStrings [ "." "-" ] [ "00" "00" ] version; + in + { + x86_64-linux = fetchurl { + url = "http://download.roonlabs.com/builds/RoonBridge_linuxx64_${urlVersion}.tar.bz2"; + sha256 = "sha256-dersaP/8qkl9k81FrgMieB0P4nKmDwjLW5poqKhEn7A="; + }; + aarch64-linux = fetchurl { + url = "http://download.roonlabs.com/builds/RoonBridge_linuxarmv8_${urlVersion}.tar.bz2"; + sha256 = "sha256-zZj7PkLUYYHo3dngqErv1RqynSXi6/D5VPZWfrppX5U="; + }; + }.${system} or throwSystem; buildInputs = [ alsa-lib @@ -70,6 +70,6 @@ stdenv.mkDerivation rec { homepage = "https://roonlabs.com"; license = licenses.unfree; maintainers = with maintainers; [ lovesegfault ]; - platforms = platforms.linux; + platforms = [ "aarch64-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/servers/roon-server/default.nix b/pkgs/servers/roon-server/default.nix index b657f1b957f..d97a5df42e1 100644 --- a/pkgs/servers/roon-server/default.nix +++ b/pkgs/servers/roon-server/default.nix @@ -9,18 +9,19 @@ , makeWrapper , stdenv , zlib -}: stdenv.mkDerivation rec { +}: +stdenv.mkDerivation rec { pname = "roon-server"; version = "1.8-831"; - # N.B. The URL is unstable. I've asked for them to provide a stable URL but - # they have ignored me. If this package fails to build for you, you may need - # to update the version and sha256. - # c.f. https://community.roonlabs.com/t/latest-roon-server-is-not-available-for-download-on-nixos/118129 - src = fetchurl { - url = "https://web.archive.org/web/20210921161727/http://download.roonlabs.com/builds/RoonServer_linuxx64.tar.bz2"; - sha256 = "sha256-SeMSC7K6DV7rVr1w/SqMnLvipoWbypS/gJnSZmpfXZk="; - }; + src = + let + urlVersion = builtins.replaceStrings [ "." "-" ] [ "00" "00" ] version; + in + fetchurl { + url = "http://download.roonlabs.com/builds/RoonServer_linuxx64_${urlVersion}.tar.bz2"; + sha256 = "sha256-SeMSC7K6DV7rVr1w/SqMnLvipoWbypS/gJnSZmpfXZk="; + }; buildInputs = [ alsa-lib @@ -68,6 +69,6 @@ homepage = "https://roonlabs.com"; license = licenses.unfree; maintainers = with maintainers; [ lovesegfault steell ]; - platforms = platforms.linux; + platforms = [ "x86_64-linux" ]; }; } diff --git a/pkgs/servers/sql/postgresql/ext/pgroonga.nix b/pkgs/servers/sql/postgresql/ext/pgroonga.nix index f93a15f6b4c..02a5f4fe135 100644 --- a/pkgs/servers/sql/postgresql/ext/pgroonga.nix +++ b/pkgs/servers/sql/postgresql/ext/pgroonga.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "pgroonga"; - version = "2.3.0"; + version = "2.3.1"; src = fetchurl { url = "https://packages.groonga.org/source/${pname}/${pname}-${version}.tar.gz"; - sha256 = "1wdm4wwwv7n73fi330szcnyf25zhvj6dgy839aawh84ik118yg2v"; + sha256 = "0v102hbszq52jvydj2qrysfs1g46wv4vmgwaa9zj0pvknh58lb43"; }; nativeBuildInputs = [ pkg-config ]; @@ -16,7 +16,8 @@ stdenv.mkDerivation rec { installPhase = '' install -D pgroonga.so -t $out/lib/ - install -D ./{pgroonga-*.sql,pgroonga.control} -t $out/share/postgresql/extension + install -D pgroonga.control -t $out/share/postgresql/extension + install -D data/pgroonga-*.sql -t $out/share/postgresql/extension ''; meta = with lib; { diff --git a/pkgs/servers/sql/postgresql/ext/plpgsql_check.nix b/pkgs/servers/sql/postgresql/ext/plpgsql_check.nix index 8e9e06d7ef0..89573ed7542 100644 --- a/pkgs/servers/sql/postgresql/ext/plpgsql_check.nix +++ b/pkgs/servers/sql/postgresql/ext/plpgsql_check.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "plpgsql_check"; - version = "1.16.0"; + version = "2.0.2"; src = fetchFromGitHub { owner = "okbob"; repo = pname; rev = "v${version}"; - sha256 = "sha256-ZZvRrt2JaAWruAT4FXB6ChS0jLKpUEDCF2UmAAH4BRQ="; + sha256 = "0a3p0hqya0g87rdc0ka024als07xa7xgpv6fs0q3mj80v6416r3v"; }; buildInputs = [ postgresql ]; diff --git a/pkgs/servers/sql/postgresql/ext/timescaledb.nix b/pkgs/servers/sql/postgresql/ext/timescaledb.nix index f8e3f00b797..dc66534cd8a 100644 --- a/pkgs/servers/sql/postgresql/ext/timescaledb.nix +++ b/pkgs/servers/sql/postgresql/ext/timescaledb.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { pname = "timescaledb"; - version = "2.4.1"; + version = "2.4.2"; nativeBuildInputs = [ cmake ]; buildInputs = [ postgresql openssl libkrb5 ]; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { owner = "timescale"; repo = "timescaledb"; rev = "refs/tags/${version}"; - sha256 = "0nc6nvngp5skz8rasvb7pyi9nlw642iwk19p17lizmw8swdm5nji"; + sha256 = "10c5qx8qq7gbs2pq56gn4nadbc8i6r28528hp2nqdg881yaiga3m"; }; cmakeFlags = [ "-DSEND_TELEMETRY_DEFAULT=OFF" "-DREGRESS_CHECKS=OFF" "-DTAP_CHECKS=OFF" ] diff --git a/pkgs/servers/tailscale/default.nix b/pkgs/servers/tailscale/default.nix index f392e56a248..1a592494f15 100644 --- a/pkgs/servers/tailscale/default.nix +++ b/pkgs/servers/tailscale/default.nix @@ -2,13 +2,13 @@ buildGoModule rec { pname = "tailscale"; - version = "1.14.3"; + version = "1.14.4"; src = fetchFromGitHub { owner = "tailscale"; repo = "tailscale"; rev = "v${version}"; - sha256 = "sha256-IXnkKKyjnktGjz3Osi2qYnrcDHC3Xfcr1oku/P0s0xk="; + sha256 = "sha256-66akb1ru2JJe23Cr8q9mkMmmgqtezqh+Mc8aA+Rovb8="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/servers/teleport/default.nix b/pkgs/servers/teleport/default.nix index 42296b03260..5acbc8e8069 100644 --- a/pkgs/servers/teleport/default.nix +++ b/pkgs/servers/teleport/default.nix @@ -10,14 +10,14 @@ let in buildGoModule rec { pname = "teleport"; - version = "7.1.2"; + version = "7.1.3"; # This repo has a private submodule "e" which fetchgit cannot handle without failing. src = fetchFromGitHub { owner = "gravitational"; repo = "teleport"; rev = "v${version}"; - sha256 = "sha256-1/Dmh7jTlGg3CqNZDFNIT8/OvgzkHG2m6Qs0ya4IM18="; + sha256 = "sha256-upzEfImMuYU/6F5HSR3Jah3QiMXEt0XMpNAPzEYV1Nk="; }; vendorSha256 = null; diff --git a/pkgs/servers/web-apps/discourse/default.nix b/pkgs/servers/web-apps/discourse/default.nix index c699c9fb1ed..0b806e83f94 100644 --- a/pkgs/servers/web-apps/discourse/default.nix +++ b/pkgs/servers/web-apps/discourse/default.nix @@ -2,20 +2,21 @@ , fetchFromGitHub, bundlerEnv, callPackage , ruby, replace, gzip, gnutar, git, cacert, util-linux, gawk -, imagemagick, optipng, pngquant, libjpeg, jpegoptim, gifsicle, libpsl -, redis, postgresql, which, brotli, procps, rsync, nodePackages, v8 +, imagemagick, optipng, pngquant, libjpeg, jpegoptim, gifsicle, jhead +, libpsl, redis, postgresql, which, brotli, procps, rsync +, nodePackages, v8 , plugins ? [] }@args: let - version = "2.7.7"; + version = "2.7.8"; src = fetchFromGitHub { owner = "discourse"; repo = "discourse"; rev = "v${version}"; - sha256 = "sha256-rhcTQyirgPX0ITjgotJAYLLSU957GanxAYYhy9j123U="; + sha256 = "sha256-p4eViEvzIU6W89FZRtMBXsT7bvf2H12bTPZ/h3iD8rA="; }; runtimeDeps = [ @@ -41,6 +42,7 @@ let jpegoptim gifsicle nodePackages.svgo + jhead ]; runtimeEnv = { @@ -242,9 +244,6 @@ let # Add a noninteractive admin creation task ./admin_create.patch - # Disable jhead, which is currently marked as vulnerable - ./disable_jhead.patch - # Add the path to the CA cert bundle to make TLS work ./action_mailer_ca_cert.patch diff --git a/pkgs/servers/web-apps/discourse/disable_jhead.patch b/pkgs/servers/web-apps/discourse/disable_jhead.patch deleted file mode 100644 index a7ee56ff185..00000000000 --- a/pkgs/servers/web-apps/discourse/disable_jhead.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/lib/file_helper.rb b/lib/file_helper.rb -index d87da5a85e..f5323292d7 100644 ---- a/lib/file_helper.rb -+++ b/lib/file_helper.rb -@@ -127,6 +127,7 @@ class FileHelper - jpegrecompress: false, - # Skip looking for gifsicle, svgo binaries - gifsicle: false, -+ jhead: false, - svgo: false - ) - end diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/Gemfile.lock b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/Gemfile.lock index d5622c0ac37..d31b4afe519 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/Gemfile.lock +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/Gemfile.lock @@ -1,7 +1,7 @@ GEM remote: https://rubygems.org/ specs: - activesupport (6.1.4) + activesupport (6.1.4.1) concurrent-ruby (~> 1.0, >= 1.0.2) i18n (>= 1.6, < 2) minitest (>= 5.1) @@ -24,4 +24,4 @@ DEPENDENCIES rrule (= 0.4.2) BUNDLED WITH - 2.2.20 + 2.2.24 diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/default.nix index b610a5c21a1..a437f293fa6 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/default.nix @@ -6,8 +6,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-calendar"; - rev = "519cf403ae3003291de20145aca243e2ffbcb4a2"; - sha256 = "0398cf7k03i7j7v5w1mysjzk2npbkvr7icj5sjwa8i8xzg34gck4"; + rev = "2f76cdd3064735d484be1df77f43100aca21aea6"; + sha256 = "1skpc8p5br1jkii1rksha1q95ias6xxyvi5bnli3q41w7fz1h5j2"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-calendar"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/gemset.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/gemset.nix index 26db0e6fd10..4f1e4c100c0 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/gemset.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-calendar/gemset.nix @@ -5,10 +5,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0kqgywy4cj3h5142dh7pl0xx5nybp25jn0ykk0znziivzks68xdk"; + sha256 = "19gx1jcq46x9d1pi1w8xq0bgvvfw239y4lalr8asm291gj3q3ds4"; type = "gem"; }; - version = "6.1.4"; + version = "6.1.4.1"; }; concurrent-ruby = { groups = ["default"]; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-canned-replies/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-canned-replies/default.nix index f90fabc0574..7ec87636d1c 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-canned-replies/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-canned-replies/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-canned-replies"; - rev = "672a96a8160d3767cf5fd6647309c7b5dcf8a55d"; - sha256 = "105zgpc7j3xmlkaz3cgxw1rfgy5d3dzln58ix569jmzifbsijml7"; + rev = "1bb77ebbe0577f257bc16783dc8b7bbf2d915092"; + sha256 = "0qvx8k9jsxjllqsqpf4k0j4niv1k2sggy6ak067wigs8ha3dkcr0"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-canned-replies"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-checklist/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-checklist/default.nix index 89edb3f71d7..2bcf88da150 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-checklist/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-checklist/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-checklist"; - rev = "6e7b9c5040c55795c7fd4db9569b3e93dad092c2"; - sha256 = "sha256-2KAVBrfAvhLZC9idi+ijbVqOCq9rSXbDVEOZS+mWJ10="; + rev = "48855d81b7c3a3274f7f78a64312125c344d92d1"; + sha256 = "0139v5wpyglfzvd07ka6gic1ssfysisgfiq09dsbjy519gnc9kjw"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-checklist"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-github/Gemfile.lock b/pkgs/servers/web-apps/discourse/plugins/discourse-github/Gemfile.lock index b6ebd834a53..3404b8a22a1 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-github/Gemfile.lock +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-github/Gemfile.lock @@ -3,7 +3,7 @@ GEM specs: addressable (2.8.0) public_suffix (>= 2.0.2, < 5.0) - faraday (1.7.0) + faraday (1.8.0) faraday-em_http (~> 1.0) faraday-em_synchrony (~> 1.0) faraday-excon (~> 1.1) @@ -40,4 +40,4 @@ DEPENDENCIES sawyer (= 0.8.2) BUNDLED WITH - 2.2.20 + 2.2.24 diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-github/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-github/default.nix index 63488de18ff..0ea57071ebe 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-github/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-github/default.nix @@ -6,8 +6,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-github"; - rev = "b6ad8e39a13e2ad5c6943ea697ca23f2c5f9fec1"; - sha256 = "0vxwp4kbf44clcqilb8ni0ykk4jrgiv4rbd05pgfvndcp3izm2i6"; + rev = "9aaf4350968fb758f9bff3588f78e3ad24ddb4b0"; + sha256 = "0nmpkh1rr0jv68a655f5610v2mn09xriiqv049a0gklap2lgv7p8"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-github"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-github/gemset.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-github/gemset.nix index 90009a3beb8..5b9b4e09853 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-github/gemset.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-github/gemset.nix @@ -16,10 +16,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0r6ik2yvsbx6jj30vck32da2bbvj4m0gf4jhp09vr75i1d6jzfvb"; + sha256 = "0afhlqgby2cizcwgh7h2sq5f77q01axjbdl25bsvfwsry9n7gyyi"; type = "gem"; }; - version = "1.7.0"; + version = "1.8.0"; }; faraday-em_http = { groups = ["default"]; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-math/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-math/default.nix index 0e751c1dc54..812ea88d040 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-math/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-math/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-math"; - rev = "aed0c83cee568d5239143bcf1df59c5fbe86b276"; - sha256 = "1k6kpnhf8s2l0w9zr5pn3wvn8w0n3gwkv7qkv0mkhkzy246ag20z"; + rev = "d7d0180352dd5a7dcb76c0817bfbb08c2a0f08c7"; + sha256 = "0y72impvnq965ibbfc9877hr78fxkrwav1xmgyy3r9w87952vcwa"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-math"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-solved/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-solved/default.nix index c92c5a1016a..b66aa1a7fab 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-solved/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-solved/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-solved"; - rev = "8bf54370200fe9d94541f69339430a7dc1019d62"; - sha256 = "1sk91h4dilkxm1wpv8zw59wgw860ywwlcgiw2kd23ybdk9n7b3lh"; + rev = "55cb184f7ef2954326561cc44fc8134798b8a9e0"; + sha256 = "0pv5i216zn0v8xfwlndvhvr06vkmxaynj8xjfnc5amy1sp6k76w7"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-solved"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-spoiler-alert/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-spoiler-alert/default.nix index da47dbf182c..5b745cbd603 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-spoiler-alert/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-spoiler-alert/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-spoiler-alert"; - rev = "ec14a2316da0a4fc055cfc21c68a60040188a2b4"; - sha256 = "11n977gp8va7jkqa6i3ja279k4nmkhk5l4hg9xhs229450m1rnfp"; + rev = "0b93227ea8e2c72afe72029382081ebff89c3638"; + sha256 = "0x0dxb41ss15sv5ph7z7q55ayf8a7r22bgkmr17924mny5440b5a"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-spoiler-alert"; diff --git a/pkgs/servers/web-apps/discourse/plugins/discourse-yearly-review/default.nix b/pkgs/servers/web-apps/discourse/plugins/discourse-yearly-review/default.nix index b20e16118c7..ea48d9997bb 100644 --- a/pkgs/servers/web-apps/discourse/plugins/discourse-yearly-review/default.nix +++ b/pkgs/servers/web-apps/discourse/plugins/discourse-yearly-review/default.nix @@ -5,8 +5,8 @@ mkDiscoursePlugin { src = fetchFromGitHub { owner = "discourse"; repo = "discourse-yearly-review"; - rev = "95149df2282d62eebeb265b4895df15a2b259d03"; - sha256 = "02n27al8n8cxz3dx4awlnd4qhv8a0fmjac57yyblmpviapja1wj7"; + rev = "cb040562f6af3163d70e8932867b530c6640ab9a"; + sha256 = "07h6nq4bafs27ly2f5chkn5vb1wdy909qffwkgp5k1fanhbqvhvs"; }; meta = with lib; { homepage = "https://github.com/discourse/discourse-yearly-review"; diff --git a/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock b/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock index 1f7a3641caa..f7fca7dae77 100644 --- a/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock +++ b/pkgs/servers/web-apps/discourse/rubyEnv/Gemfile.lock @@ -590,4 +590,4 @@ DEPENDENCIES yaml-lint BUNDLED WITH - 2.2.20 + 2.2.24 diff --git a/pkgs/servers/web-apps/hedgedoc/yarn.nix b/pkgs/servers/web-apps/hedgedoc/yarn.nix index 8ba21d8f5f0..9c71c0695fd 100644 --- a/pkgs/servers/web-apps/hedgedoc/yarn.nix +++ b/pkgs/servers/web-apps/hedgedoc/yarn.nix @@ -6168,7 +6168,7 @@ repo = fetchgit { url = "https://github.com/hedgedoc/js-sequence-diagrams.git"; rev = "bda0e49b6c2754f3c7158b1dfb9ccf26efc24b39"; - sha256 = "0rl29jmhv7vhadzb6d08hi9g64227r9j10fh3d0lbgxinrib5gma"; + sha256 = "0d2zf62fmad760rg9hrkyhp03k5apms3fm0mf64yy8q6p3iw7jvw"; }; in runCommand "js-sequence-diagrams.git" { buildInputs = [gnutar]; } '' diff --git a/pkgs/servers/web-apps/pict-rs/default.nix b/pkgs/servers/web-apps/pict-rs/default.nix new file mode 100644 index 00000000000..96c8a83175b --- /dev/null +++ b/pkgs/servers/web-apps/pict-rs/default.nix @@ -0,0 +1,44 @@ +{ stdenv +, lib +, fetchFromGitea +, rustPlatform +, makeWrapper +, protobuf +, Security +, imagemagick +, ffmpeg +, exiftool +}: + +rustPlatform.buildRustPackage rec { + pname = "pict-rs"; + version = "0.3.0-alpha.37"; + + src = fetchFromGitea { + domain = "git.asonix.dog"; + owner = "asonix"; + repo = pname; + rev = "v${version}"; + sha256 = "sha256-21yfsCicn2bjSNEMMWDG8wvnw10uT3M1L3cXCUhc24c="; + }; + + cargoSha256 = "sha256-F/mqdIjF5QOq5Plnq0DyeFP1+b7dCBcoU9iFxzcaZws="; + + # needed for internal protobuf c wrapper library + PROTOC = "${protobuf}/bin/protoc"; + PROTOC_INCLUDE = "${protobuf}/include"; + + buildInputs = [ makeWrapper ] ++ lib.optionals stdenv.isDarwin [ Security ]; + + postInstall = '' + wrapProgram "$out/bin/pict-rs" \ + --prefix PATH : "${lib.makeBinPath [ imagemagick ffmpeg exiftool ]}" + ''; + + meta = with lib; { + description = "a simple image hosting service"; + homepage = "https://git.asonix.dog/asonix/pict-rs"; + license = with licenses; [ agpl3Plus ]; + maintainers = with maintainers; [ happysalada ]; + }; +} diff --git a/pkgs/servers/web-apps/vikunja/api.nix b/pkgs/servers/web-apps/vikunja/api.nix index fc1aa09e4f6..2917c0e2400 100644 --- a/pkgs/servers/web-apps/vikunja/api.nix +++ b/pkgs/servers/web-apps/vikunja/api.nix @@ -2,14 +2,14 @@ buildGoModule rec { pname = "vikunja-api"; - version = "0.18.0"; + version = "0.18.1"; src = fetchFromGitea { domain = "kolaente.dev"; owner = "vikunja"; repo = "api"; rev = "v${version}"; - sha256 = "sha256-43y9+y5VVgbCexHPsYZ9/Up84OoPSrThHWiKR0P1h3s="; + sha256 = "sha256-ngdtK8e4mLpbuY9OP1aHk99qPX/cKwnyhb/3ImTwF6M="; }; nativeBuildInputs = @@ -24,7 +24,7 @@ buildGoModule rec { ''; in [ fakeGit mage ]; - vendorSha256 = "sha256-1tXnlOlVH61Y4jN07XBfTgZhAsU2HeudiEVAtlP+Cpk="; + vendorSha256 = "sha256-0MP04KpWX17Fa1WhLwF4yzIsDqGAeTUXxv81B+BTNe4="; # checks need to be disabled because of needed internet for some checks doCheck = false; diff --git a/pkgs/servers/web-apps/vikunja/frontend.nix b/pkgs/servers/web-apps/vikunja/frontend.nix index 6cca64e19ae..3c708287ca3 100644 --- a/pkgs/servers/web-apps/vikunja/frontend.nix +++ b/pkgs/servers/web-apps/vikunja/frontend.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "vikunja-frontend"; - version = "0.18.0"; + version = "0.18.1"; src = fetchurl { url = "https://dl.vikunja.io/frontend/${pname}-${version}.zip"; - sha256 = "sha256-LV7+HfXeNcVHuoo+n6fuAQoIb/m0lOs6JYYMNLM/jTA="; + sha256 = "sha256-u4XA6Jqn+p2J0sB2KabwZY/lFwZakZEvUUh/enrhtN4="; }; nativeBuildInputs = [ unzip ]; diff --git a/pkgs/servers/web-apps/wiki-js/default.nix b/pkgs/servers/web-apps/wiki-js/default.nix index c16f3a88b37..ca9acdf27cd 100644 --- a/pkgs/servers/web-apps/wiki-js/default.nix +++ b/pkgs/servers/web-apps/wiki-js/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "wiki-js"; - version = "2.5.214"; + version = "2.5.219"; src = fetchurl { url = "https://github.com/Requarks/wiki/releases/download/${version}/${pname}.tar.gz"; - sha256 = "sha256-EXysHhEJ41LMLRueEoFr+SE9SdJEXMZLhJQSvZgToTg="; + sha256 = "sha256-xzxOv17B+9wegtNXGr9SD4KUWlMbrvPtZhvfmoZhBNc="; }; sourceRoot = "."; diff --git a/pkgs/servers/wsdd/default.nix b/pkgs/servers/wsdd/default.nix index f1a385c6809..07c26872f3f 100644 --- a/pkgs/servers/wsdd/default.nix +++ b/pkgs/servers/wsdd/default.nix @@ -1,14 +1,14 @@ -{ lib, stdenv, fetchFromGitHub, makeWrapper, nixosTests, python3, fetchpatch }: +{ lib, stdenv, fetchFromGitHub, makeWrapper, nixosTests, python3 }: stdenv.mkDerivation rec { pname = "wsdd"; - version = "0.6.2"; + version = "0.6.4"; src = fetchFromGitHub { owner = "christgau"; repo = pname; rev = "v${version}"; - sha256 = "0444xh1r5wd0zfch1hg1f9s4cw68srrm87hqx16qvlgx6jmz5j0p"; + sha256 = "0lfvpbk1lkri597ac4gz5x4csfyik8axz4b41i03xsqv9bci2vh6"; }; nativeBuildInputs = [ makeWrapper ]; @@ -16,12 +16,9 @@ stdenv.mkDerivation rec { buildInputs = [ python3 ]; patches = [ - (fetchpatch { - # https://github.com/christgau/wsdd/issues/72 - name = "fix_send_messages_using_correct_socket.patch"; - url = "https://github.com/christgau/wsdd/commit/1ed74fe73a9fe2e2720859e2822116d65e4ffa5b.patch"; - sha256 = "1n9bqvh20nhnvnc5pxvzf9kk8nky6rmbmfryg65lfmr1hmg676zg"; - }) + # Increase timeout to socket urlopen + # See https://github.com/christgau/wsdd/issues/80#issuecomment-76848906 + ./increase_timeout.patch ]; installPhase = '' diff --git a/pkgs/servers/wsdd/increase_timeout.patch b/pkgs/servers/wsdd/increase_timeout.patch new file mode 100644 index 00000000000..ac619f705d8 --- /dev/null +++ b/pkgs/servers/wsdd/increase_timeout.patch @@ -0,0 +1,13 @@ +diff --git a/src/wsdd.py b/src/wsdd.py +index 88a7a2a..360e4f7 100755 +--- a/src/wsdd.py ++++ b/src/wsdd.py +@@ -699,7 +699,7 @@ class WSDClient(WSDUDPMessageHandler): + request.add_header('Host', host) + + try: +- with urllib.request.urlopen(request, None, 2.0) as stream: ++ with urllib.request.urlopen(request, None, 5.0) as stream: + self.handle_metadata(stream.read(), endpoint, xaddr) + except urllib.error.URLError as e: + logger.warning('could not fetch metadata from: {} {}'.format(url, e)) diff --git a/pkgs/shells/powershell/default.nix b/pkgs/shells/powershell/default.nix index 5c082641e9f..4d3038079a8 100644 --- a/pkgs/shells/powershell/default.nix +++ b/pkgs/shells/powershell/default.nix @@ -49,6 +49,10 @@ stdenv.mkDerivation rec { '' + lib.optionalString (!stdenv.isDarwin && !stdenv.isAarch64) '' patchelf --replace-needed libcrypto${ext}.1.0.0 libcrypto${ext}.1.1 $pslibs/libmi.so patchelf --replace-needed libssl${ext}.1.0.0 libssl${ext}.1.1 $pslibs/libmi.so + '' + lib.optionalString (!stdenv.isDarwin) '' + # Remove liblttng-ust from dependencies once + # https://github.com/PowerShell/PowerShell/pull/14688 is in a release + patchelf --replace-needed liblttng-ust${ext}.0 liblttng-ust${ext}.1 $pslibs/libcoreclrtraceptprovider.so '' + '' mkdir -p $out/bin @@ -69,7 +73,7 @@ stdenv.mkDerivation rec { meta = with lib; { description = "Powerful cross-platform (Windows, Linux, and macOS) shell and scripting language based on .NET"; homepage = "https://github.com/PowerShell/PowerShell"; - maintainers = with maintainers; [ yrashk srgom ]; + maintainers = with maintainers; [ yrashk srgom p3psi ]; platforms = [ "x86_64-darwin" "x86_64-linux" "aarch64-linux"]; license = with licenses; [ mit ]; }; diff --git a/pkgs/tools/admin/exoscale-cli/default.nix b/pkgs/tools/admin/exoscale-cli/default.nix index f217408c28d..4bf2049d97a 100644 --- a/pkgs/tools/admin/exoscale-cli/default.nix +++ b/pkgs/tools/admin/exoscale-cli/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { pname = "exoscale-cli"; - version = "1.42.0"; + version = "1.44.0"; src = fetchFromGitHub { owner = "exoscale"; repo = "cli"; rev = "v${version}"; - sha256 = "sha256-t6/w998mTsFl/V/zcbVxokJk4VZWDoOXsjr93GW7Zh4="; + sha256 = "sha256-1ntKm6OA20+/gMVufbmM6fZ2UIXG/0SzH9vZQUvsIUQ="; }; goPackagePath = "github.com/exoscale/cli"; diff --git a/pkgs/tools/archivers/cpio/default.nix b/pkgs/tools/archivers/cpio/default.nix index c172edd1fd9..5b57dc20e3b 100644 --- a/pkgs/tools/archivers/cpio/default.nix +++ b/pkgs/tools/archivers/cpio/default.nix @@ -1,27 +1,32 @@ { lib, stdenv, fetchurl, fetchpatch }: -let +stdenv.mkDerivation rec { + pname = "cpio"; version = "2.13"; - name = "cpio-${version}"; -in stdenv.mkDerivation { - inherit name; src = fetchurl { - url = "mirror://gnu/cpio/${name}.tar.bz2"; + url = "mirror://gnu/cpio/cpio-${version}.tar.bz2"; sha256 = "0vbgnhkawdllgnkdn6zn1f56fczwk0518krakz2qbwhxmv2vvdga"; }; - patches = [ - (fetchpatch { - name = "CVE-2021-38185.patch"; - url = "https://git.savannah.gnu.org/cgit/cpio.git/patch/?id=dd96882877721703e19272fe25034560b794061b"; - sha256 = "0vmr0qjwj2ldnzsvccl105ckwgx3ssvn9mp3f27ss0kiyigrzz32"; - }) + patches = let + fp = suffix: rev: sha256: fetchpatch { + name = "CVE-2021-38185-${suffix}.patch"; + url = "https://git.savannah.gnu.org/cgit/cpio.git/patch/?id=${rev}"; + inherit sha256; + }; + in [ + (fp "1" "dd96882877721703e19272fe25034560b794061b" + "0vmr0qjwj2ldnzsvccl105ckwgx3ssvn9mp3f27ss0kiyigrzz32") + (fp "2" "dfc801c44a93bed7b3951905b188823d6a0432c8" + "1qkrhi3lbxk6hflp6w3h4sgssc0wblv8r0qgxqzbjrm36pqwxiwh") + (fp "3" "236684f6deb3178043fe72a8e2faca538fa2aae1" + "0pidkbxalpj5yz4fr95x8h0rizgjij0xgvjgirfkjk460giawwg6") ]; - preConfigure = if stdenv.isCygwin then '' + preConfigure = lib.optionalString stdenv.isCygwin '' sed -i gnu/fpending.h -e 's,include <stdio_ext.h>,,' - '' else null; + ''; enableParallelBuilding = true; diff --git a/pkgs/tools/filesystems/apfsprogs/default.nix b/pkgs/tools/filesystems/apfsprogs/default.nix index b50eaf39636..04e7cd89ae4 100644 --- a/pkgs/tools/filesystems/apfsprogs/default.nix +++ b/pkgs/tools/filesystems/apfsprogs/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation { pname = "apfsprogs"; - version = "unstable-2021-05-07"; + version = "unstable-2021-08-24"; src = fetchFromGitHub { owner = "linux-apfs"; repo = "apfsprogs"; - rev = "d360211a30608a907e3ee8ad4468d606c40ec2d7"; - sha256 = "sha256-SeFs/GQfIEvnxERyww+mnynjR7E02DdtBA6JsknEM+Q="; + rev = "5efac5a701bcb56e23cfc182b5b3901bff27d343"; + sha256 = "sha256-vQE586HwrPkF0uaTKrJ7yXb24ntRI0QmBla7N2ErAU8="; }; buildPhase = '' diff --git a/pkgs/tools/filesystems/catcli/default.nix b/pkgs/tools/filesystems/catcli/default.nix index b945198e01a..ac2f856c3c0 100644 --- a/pkgs/tools/filesystems/catcli/default.nix +++ b/pkgs/tools/filesystems/catcli/default.nix @@ -7,13 +7,13 @@ buildPythonApplication rec { pname = "catcli"; - version = "0.7.2"; + version = "0.7.3"; src = fetchFromGitHub { owner = "deadc0de6"; repo = pname; rev = "v${version}"; - sha256 = "12928pvwd6jr4x81nxi5691axianm4vz5gql1jazlij0ahc2f905"; + sha256 = "03yf9sjqdg3xcbvkn1591zxd2d0r8wz1b749zrn55k3a03c7jzf5"; }; propagatedBuildInputs = [ docopt anytree ]; diff --git a/pkgs/tools/filesystems/ceph/default.nix b/pkgs/tools/filesystems/ceph/default.nix index 426aff81f06..0f28ad14416 100644 --- a/pkgs/tools/filesystems/ceph/default.nix +++ b/pkgs/tools/filesystems/ceph/default.nix @@ -146,10 +146,10 @@ let ]); sitePackages = ceph-python-env.python.sitePackages; - version = "16.2.5"; + version = "16.2.6"; src = fetchurl { url = "http://download.ceph.com/tarballs/ceph-${version}.tar.gz"; - sha256 = "sha256-uCBpFvp5k+A5SgwxoJVkuGb9E69paKrs3qda5RpsRt4="; + sha256 = "sha256-TXGyZnyVTYAf7G7BcTv3dAfK/54JfOKObcyTRhCrnYA="; }; in rec { ceph = stdenv.mkDerivation { diff --git a/pkgs/tools/filesystems/sasquatch/default.nix b/pkgs/tools/filesystems/sasquatch/default.nix index 238223c4981..017fda14cc6 100644 --- a/pkgs/tools/filesystems/sasquatch/default.nix +++ b/pkgs/tools/filesystems/sasquatch/default.nix @@ -43,6 +43,9 @@ stdenv.mkDerivation rec { patchFlags = [ "-p0" ]; postPatch = '' + # Drop blanket -Werror to avoid build failure on fresh toolchains + # like gcc-11. + substituteInPlace squashfs-tools/Makefile --replace ' -Werror' ' ' cd squashfs-tools ''; diff --git a/pkgs/tools/graphics/pfstools/default.nix b/pkgs/tools/graphics/pfstools/default.nix index 99b9e3e0e48..a8132120475 100644 --- a/pkgs/tools/graphics/pfstools/default.nix +++ b/pkgs/tools/graphics/pfstools/default.nix @@ -1,6 +1,7 @@ { lib, stdenv, mkDerivation, fetchurl, cmake, pkg-config, darwin , openexr, zlib, imagemagick6, libGLU, libGL, freeglut, fftwFloat -, fftw, gsl, libexif, perl, opencv2, qtbase, netpbm +, fftw, gsl, libexif, perl, qtbase, netpbm +, enableUnfree ? false, opencv2 }: mkDerivation rec { @@ -28,12 +29,12 @@ mkDerivation rec { nativeBuildInputs = [ cmake pkg-config ]; buildInputs = [ openexr zlib imagemagick6 fftwFloat - fftw gsl libexif perl opencv2 qtbase netpbm + fftw gsl libexif perl qtbase netpbm ] ++ (if stdenv.isDarwin then (with darwin.apple_sdk.frameworks; [ OpenGL GLUT ]) else [ libGLU libGL freeglut - ]); + ]) ++ lib.optional enableUnfree (opencv2.override { enableUnfree = true; }); patches = [ ./threads.patch ./pfstools.patch ./pfsalign.patch ]; diff --git a/pkgs/tools/graphics/pngquant/default.nix b/pkgs/tools/graphics/pngquant/default.nix index 7463e2a45e0..b2b0691718a 100644 --- a/pkgs/tools/graphics/pngquant/default.nix +++ b/pkgs/tools/graphics/pngquant/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "pngquant"; - version = "2.14.1"; + version = "2.16.0"; src = fetchFromGitHub { owner = "kornelski"; repo = "pngquant"; rev = version; - sha256 = "054hi33qp3jc7hv0141wi8drwdg24v5zfp8znwjmz4mcdls8vxbb"; + sha256 = "0ny6h3fwf6gvzkqkc3zb5mrkqxm6s7xzb6bvzn6vlamklncqgl78"; fetchSubmodules = true; }; diff --git a/pkgs/tools/inputmethods/fcitx5/default.nix b/pkgs/tools/inputmethods/fcitx5/default.nix index ee801fdb24a..85b65257743 100644 --- a/pkgs/tools/inputmethods/fcitx5/default.nix +++ b/pkgs/tools/inputmethods/fcitx5/default.nix @@ -41,13 +41,13 @@ let in stdenv.mkDerivation rec { pname = "fcitx5"; - version = "5.0.8"; + version = "5.0.9"; src = fetchFromGitHub { owner = "fcitx"; repo = pname; rev = version; - sha256 = "0czj2awvgk9apdh9rj3vcb04g8x2wp1d4sshvch31nwpqs10hssr"; + sha256 = "161xgm2fs51v8l46raz6xxkjmshpgaaax64lz8208m7fcd32ll3a"; }; prePatch = '' diff --git a/pkgs/tools/inputmethods/fcitx5/fcitx5-rime.nix b/pkgs/tools/inputmethods/fcitx5/fcitx5-rime.nix index cd362e94ef5..86e5b6ca51a 100644 --- a/pkgs/tools/inputmethods/fcitx5/fcitx5-rime.nix +++ b/pkgs/tools/inputmethods/fcitx5/fcitx5-rime.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { pname = "fcitx5-rime"; - version = "5.0.6"; + version = "5.0.7"; src = fetchFromGitHub { owner = "fcitx"; repo = pname; rev = version; - sha256 = "1r36c1pl63vka9mxa8f5x0kijapjgxzz5b4db8h87ri9kcxk7i2g"; + sha256 = "1djakg17rxc38smja4y76i0p4gwdj3lgwym8kybkaspk7lxr62zy"; }; cmakeFlags = [ diff --git a/pkgs/tools/inputmethods/lisgd/default.nix b/pkgs/tools/inputmethods/lisgd/default.nix index 8b26e35c054..368f1efa759 100644 --- a/pkgs/tools/inputmethods/lisgd/default.nix +++ b/pkgs/tools/inputmethods/lisgd/default.nix @@ -4,19 +4,20 @@ , writeText , libinput , libX11 +, wayland , conf ? null , patches ? [ ] }: stdenv.mkDerivation rec { pname = "lisgd"; - version = "0.3.1"; + version = "0.3.2"; src = fetchFromSourcehut { owner = "~mil"; repo = "lisgd"; rev = version; - sha256 = "sha256-A8SsF5k4GwfVCj8JtodNWoLdPzaA9YsoP5EHHakUguc="; + sha256 = "sha256-yE2CUv1XDvo8fW0bLS1O2oxgDUu4drCO3jFpxPgAYKU="; }; inherit patches; @@ -33,6 +34,7 @@ stdenv.mkDerivation rec { buildInputs = [ libinput libX11 + wayland ]; makeFlags = [ diff --git a/pkgs/tools/misc/esphome/default.nix b/pkgs/tools/misc/esphome/default.nix index a4678e35700..d366aaec688 100644 --- a/pkgs/tools/misc/esphome/default.nix +++ b/pkgs/tools/misc/esphome/default.nix @@ -16,13 +16,13 @@ let in with python.pkgs; buildPythonApplication rec { pname = "esphome"; - version = "2021.9.1"; + version = "2021.9.2"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "sha256-JWUGOvY34wZSBTZdpuApPjEfBtgPSFKiVk89TUK441I="; + sha256 = "sha256-u79Hh1LJMaHm9TeNuMd5IQkJgOMIKDbUwW6KHhTHv2Q="; }; patches = [ diff --git a/pkgs/tools/misc/execline/default.nix b/pkgs/tools/misc/execline/default.nix index 095e43b9d3e..2e1e1b8f7e0 100644 --- a/pkgs/tools/misc/execline/default.nix +++ b/pkgs/tools/misc/execline/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "execline"; - version = "2.8.0.1"; - sha256 = "1v9swmhw2rcrr9fmkmd7qh8qq0kslhmvxwz2a3bhan9ksabz8wx3"; + version = "2.8.1.0"; + sha256 = "0msmzf5zwjcsgjlvvq28rd2i0fkdb2skmv8ii0ix8dhyckwwjmav"; description = "A small scripting language, to be used in place of a shell in non-interactive scripts"; diff --git a/pkgs/tools/misc/fclones/default.nix b/pkgs/tools/misc/fclones/default.nix index 14ade9ce32b..489c6fc01be 100644 --- a/pkgs/tools/misc/fclones/default.nix +++ b/pkgs/tools/misc/fclones/default.nix @@ -7,16 +7,16 @@ rustPlatform.buildRustPackage rec { pname = "fclones"; - version = "0.15.0"; + version = "0.16.0"; src = fetchFromGitHub { owner = "pkolaczk"; repo = pname; rev = "v${version}"; - sha256 = "sha256-8NUneKJpnBjC4OcAABEpI9p+saBqAk+l43FS8/tIYjc="; + sha256 = "sha256-BoCbN7EY7SmBYCS3OLFrQ1j1MUvZ+/oQAdoHCw9kCQE="; }; - cargoSha256 = "sha256-5qX45FJFaiE1vTXjllM9U1w57MX18GgKEFOEBMc64Jk="; + cargoSha256 = "sha256-pAYPfRm7QN4mKwnYUMq5Td+bF1tmy3oGObWvMabmnpw="; buildInputs = lib.optionals stdenv.isDarwin [ AppKit diff --git a/pkgs/tools/misc/fdtools/default.nix b/pkgs/tools/misc/fdtools/default.nix index e9efd66b2f1..f55c7f6d3b3 100644 --- a/pkgs/tools/misc/fdtools/default.nix +++ b/pkgs/tools/misc/fdtools/default.nix @@ -2,8 +2,10 @@ let pname = "fdtools"; + # When you update, check whether we can drop the skalibs pin. version = "2020.05.04"; sha256 = "0lnafcp4yipi0dl8gh33zjs8wlpz0mim8mwmiz9s49id0b0fmlla"; + skalibs = skawarePackages.skalibs_2_10; in stdenv.mkDerivation { inherit pname version; @@ -16,7 +18,10 @@ in stdenv.mkDerivation { patches = [ ./new-skalibs.patch ]; outputs = [ "bin" "lib" "dev" "doc" "out" ]; - buildInputs = [ skawarePackages.skalibs ]; + buildInputs = [ + # temporary, until fdtools catches up to skalibs + skalibs + ]; configurePhase = '' cd ${pname}-${version} @@ -27,7 +32,7 @@ in stdenv.mkDerivation { conf-compile/defaults/host_compile.sh \ > conf-compile/host_compile.sh - echo "${skawarePackages.skalibs.lib}/lib/skalibs/sysdeps" \ + echo "${skalibs.lib}/lib/skalibs/sysdeps" \ > conf-compile/depend_skalibs_sysdeps ''; diff --git a/pkgs/tools/misc/github-backup/default.nix b/pkgs/tools/misc/github-backup/default.nix index be77f3f5d96..3ab7f10909e 100644 --- a/pkgs/tools/misc/github-backup/default.nix +++ b/pkgs/tools/misc/github-backup/default.nix @@ -6,11 +6,11 @@ python3.pkgs.buildPythonApplication rec { pname = "github-backup"; - version = "0.40.0"; + version = "0.40.1"; src = python3.pkgs.fetchPypi { inherit pname version; - sha256 = "sha256-HgNOTi4z1wbRdeVFjGVbpuxd9/o9aWWYd8/ykiVF8Ks="; + sha256 = "sha256-Qrj0+4WXlW0UgG2xV/P8e0QgUG3VurY4HIAiiUF3LW8="; }; makeWrapperArgs = [ diff --git a/pkgs/tools/misc/neofetch/default.nix b/pkgs/tools/misc/neofetch/default.nix index 3d4bf8500ba..77af8d5d788 100644 --- a/pkgs/tools/misc/neofetch/default.nix +++ b/pkgs/tools/misc/neofetch/default.nix @@ -1,5 +1,5 @@ { lib, stdenvNoCC, fetchFromGitHub, bash, makeWrapper, pciutils -, x11Support ? true, ueberzug +, x11Support ? true, ueberzug, fetchpatch }: stdenvNoCC.mkDerivation rec { @@ -13,6 +13,14 @@ stdenvNoCC.mkDerivation rec { sha256 = "sha256-PZjFF/K7bvPIjGVoGqaoR8pWE6Di/qJVKFNcIz7G8xE="; }; + patches = [ + (fetchpatch { + url = "https://github.com/dylanaraps/neofetch/commit/413c32e55dc16f0360f8e84af2b59fe45505f81b.patch"; + sha256 = "1fapdg9z79f0j3vw7fgi72b54aw4brn42bjsj48brbvg3ixsciph"; + name = "avoid_overwriting_gio_extra_modules_env_var.patch"; + }) + ]; + strictDeps = true; buildInputs = [ bash ]; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/misc/pspg/default.nix b/pkgs/tools/misc/pspg/default.nix index 26427d38039..b54c2e37d28 100644 --- a/pkgs/tools/misc/pspg/default.nix +++ b/pkgs/tools/misc/pspg/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchFromGitHub, gnugrep, ncurses, pkg-config, readline, postgresql }: +{ lib, stdenv, fetchFromGitHub, gnugrep, ncurses, pkg-config, installShellFiles, readline, postgresql }: stdenv.mkDerivation rec { pname = "pspg"; @@ -11,11 +11,15 @@ stdenv.mkDerivation rec { sha256 = "sha256-xJ7kgEvIsTufAZa5x3YpElTc74nEs9C+baVjbheHySM="; }; - nativeBuildInputs = [ pkg-config ]; + nativeBuildInputs = [ pkg-config installShellFiles ]; buildInputs = [ gnugrep ncurses readline postgresql ]; makeFlags = [ "PREFIX=${placeholder "out"}" ]; + postInstall = '' + installShellCompletion --bash --name pspg.bash bash-completion.sh + ''; + meta = with lib; { homepage = "https://github.com/okbob/pspg"; description = "Postgres Pager"; diff --git a/pkgs/tools/misc/s6-portable-utils/default.nix b/pkgs/tools/misc/s6-portable-utils/default.nix index d6f475a408e..045a8b9ab03 100644 --- a/pkgs/tools/misc/s6-portable-utils/default.nix +++ b/pkgs/tools/misc/s6-portable-utils/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-portable-utils"; - version = "2.2.3.2"; - sha256 = "173nmygkp7ky3093dg4rx3ahvyl7ll86z8qj6pl3jd96xb9s49v6"; + version = "2.2.3.3"; + sha256 = "132jj5qk8x40kw6lrrn7jiqhvqj9d2h6g6mhl8zma1sp37bg0i84"; description = "A set of tiny general Unix utilities optimized for simplicity and small size"; diff --git a/pkgs/tools/misc/sharedown/default.nix b/pkgs/tools/misc/sharedown/default.nix new file mode 100644 index 00000000000..fed2a826459 --- /dev/null +++ b/pkgs/tools/misc/sharedown/default.nix @@ -0,0 +1,95 @@ +{ stdenvNoCC +, lib +, fetchFromGitHub +, ffmpeg +, yt-dlp +, electron +, makeWrapper +, makeDesktopItem +, copyDesktopItems +, yarn2nix-moretea +, chromium +}: + +let + binPath = lib.makeBinPath ([ + ffmpeg + yt-dlp + ]); + + pname = "Sharedown"; + version = "2.0.0"; + + src = fetchFromGitHub { + owner = "kylon"; + repo = pname; + rev = version; + sha256 = "sha256-Z6OsZvVzk//qEkl4ciNz4cQRqC2GFg0qYgmliAyz6fo="; + }; + + modules = yarn2nix-moretea.mkYarnModules { + name = "${pname}-modules-${version}"; + inherit pname version; + + yarnFlags = yarn2nix-moretea.defaultYarnFlags ++ [ + "--production" + ]; + + packageJSON = "${src}/package.json"; + yarnLock = ./yarn.lock; + yarnNix = ./yarndeps.nix; + }; +in +stdenvNoCC.mkDerivation rec { + inherit pname version src; + + nativeBuildInputs = [ + copyDesktopItems + makeWrapper + ]; + + desktopItems = [ + (makeDesktopItem { + name = "Sharedown"; + exec = "Sharedown"; + icon = "Sharedown"; + comment = "An Application to save your Sharepoint videos for offline usage."; + desktopName = "Sharedown"; + categories = "Network;Archiving"; + }) + ]; + + dontBuild = true; + + installPhase = '' + runHook preInstall + + mkdir -p "$out/bin" "$out/share/Sharedown" "$out/share/applications" "$out/share/icons/hicolor/512x512/apps" + + # Electron app + cp -r *.js *.json sharedownlogo.png sharedown "${modules}/node_modules" "$out/share/Sharedown" + + # Desktop Launcher + cp build/icon.png "$out/share/icons/hicolor/512x512/apps/Sharedown.png" + + # Install electron wrapper script + makeWrapper "${electron}/bin/electron" "$out/bin/Sharedown" \ + --add-flags "$out/share/Sharedown" \ + --prefix PATH : "${binPath}" \ + --set PUPPETEER_EXECUTABLE_PATH "${chromium}/bin/chromium" + + runHook postInstall + ''; + + passthru.updateScript = ./update.sh; + + meta = with lib; { + description = "Application to save your Sharepoint videos for offline usage"; + homepage = "https://github.com/kylon/Sharedown"; + license = licenses.gpl3Plus; + maintainers = with maintainers; [ + jtojnar + ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/tools/misc/sharedown/update.sh b/pkgs/tools/misc/sharedown/update.sh new file mode 100755 index 00000000000..5ba572f2369 --- /dev/null +++ b/pkgs/tools/misc/sharedown/update.sh @@ -0,0 +1,16 @@ +#!/usr/bin/env nix-shell +#!nix-shell -i bash -p nix-update yarn yarn2nix-moretea.yarn2nix + +set -euo pipefail + +dirname="$(realpath "$(dirname "$0")")" +sourceDir="$(nix-build -A sharedown.src --no-out-link)" +tempDir="$(mktemp -d)" + +nix-update sharedown + +cp -r "$sourceDir"/* "$tempDir" +cd "$tempDir" +PUPPETEER_SKIP_DOWNLOAD=1 yarn install +yarn2nix > "$dirname/yarndeps.nix" +cp -r yarn.lock "$dirname" diff --git a/pkgs/tools/misc/sharedown/yarn.lock b/pkgs/tools/misc/sharedown/yarn.lock new file mode 100644 index 00000000000..48f5917ec27 --- /dev/null +++ b/pkgs/tools/misc/sharedown/yarn.lock @@ -0,0 +1,2193 @@ +# THIS IS AN AUTOGENERATED FILE. DO NOT EDIT THIS FILE DIRECTLY. +# yarn lockfile v1 + + +"7zip-bin@~5.1.1": + version "5.1.1" + resolved "https://registry.yarnpkg.com/7zip-bin/-/7zip-bin-5.1.1.tgz#9274ec7460652f9c632c59addf24efb1684ef876" + integrity sha512-sAP4LldeWNz0lNzmTird3uWfFDWWTeg6V/MsmyyLR9X1idwKBWIgt/ZvinqQldJm3LecKEs1emkbquO6PCiLVQ== + +"@develar/schema-utils@~2.6.5": + version "2.6.5" + resolved "https://registry.yarnpkg.com/@develar/schema-utils/-/schema-utils-2.6.5.tgz#3ece22c5838402419a6e0425f85742b961d9b6c6" + integrity sha512-0cp4PsWQ/9avqTVMCtZ+GirikIA36ikvjtHweU4/j8yLtgObI0+JUPhYFScgwlteveGB1rt3Cm8UhN04XayDig== + dependencies: + ajv "^6.12.0" + ajv-keywords "^3.4.1" + +"@electron/get@^1.13.0": + version "1.13.0" + resolved "https://registry.yarnpkg.com/@electron/get/-/get-1.13.0.tgz#95c6bcaff4f9a505ea46792424f451efea89228c" + integrity sha512-+SjZhRuRo+STTO1Fdhzqnv9D2ZhjxXP6egsJ9kiO8dtP68cDx7dFCwWi64dlMQV7sWcfW1OYCW4wviEBzmRsfQ== + dependencies: + debug "^4.1.1" + env-paths "^2.2.0" + fs-extra 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"https://registry.yarnpkg.com/typedarray/-/typedarray-0.0.6.tgz"; + sha1 = "867ac74e3864187b1d3d47d996a78ec5c8830777"; + }; + } + { + name = "unbzip2_stream___unbzip2_stream_1.3.3.tgz"; + path = fetchurl { + name = "unbzip2_stream___unbzip2_stream_1.3.3.tgz"; + url = "https://registry.yarnpkg.com/unbzip2-stream/-/unbzip2-stream-1.3.3.tgz"; + sha1 = "d156d205e670d8d8c393e1c02ebd506422873f6a"; + }; + } + { + name = "unique_string___unique_string_2.0.0.tgz"; + path = fetchurl { + name = "unique_string___unique_string_2.0.0.tgz"; + url = "https://registry.yarnpkg.com/unique-string/-/unique-string-2.0.0.tgz"; + sha1 = "39c6451f81afb2749de2b233e3f7c5e8843bd89d"; + }; + } + { + name = "universalify___universalify_0.1.2.tgz"; + path = fetchurl { + name = "universalify___universalify_0.1.2.tgz"; + url = "https://registry.yarnpkg.com/universalify/-/universalify-0.1.2.tgz"; + sha1 = "b646f69be3942dabcecc9d6639c80dc105efaa66"; + }; + } + { + name = "universalify___universalify_2.0.0.tgz"; + path = fetchurl { + name = "universalify___universalify_2.0.0.tgz"; + url = "https://registry.yarnpkg.com/universalify/-/universalify-2.0.0.tgz"; + sha1 = "75a4984efedc4b08975c5aeb73f530d02df25717"; + }; + } + { + name = "update_notifier___update_notifier_5.1.0.tgz"; + path = fetchurl { + name = "update_notifier___update_notifier_5.1.0.tgz"; + url = "https://registry.yarnpkg.com/update-notifier/-/update-notifier-5.1.0.tgz"; + sha1 = "4ab0d7c7f36a231dd7316cf7729313f0214d9ad9"; + }; + } + { + name = "uri_js___uri_js_4.4.1.tgz"; + path = fetchurl { + name = "uri_js___uri_js_4.4.1.tgz"; + url = "https://registry.yarnpkg.com/uri-js/-/uri-js-4.4.1.tgz"; + sha1 = "9b1a52595225859e55f669d928f88c6c57f2a77e"; + }; + } + { + name = "url_parse_lax___url_parse_lax_3.0.0.tgz"; + path = fetchurl { + name = "url_parse_lax___url_parse_lax_3.0.0.tgz"; + url = "https://registry.yarnpkg.com/url-parse-lax/-/url-parse-lax-3.0.0.tgz"; + sha1 = "16b5cafc07dbe3676c1b1999177823d6503acb0c"; + }; + } + { + name = "utf8_byte_length___utf8_byte_length_1.0.4.tgz"; + path = fetchurl { + name = "utf8_byte_length___utf8_byte_length_1.0.4.tgz"; + url = "https://registry.yarnpkg.com/utf8-byte-length/-/utf8-byte-length-1.0.4.tgz"; + sha1 = "f45f150c4c66eee968186505ab93fcbb8ad6bf61"; + }; + } + { + name = "util_deprecate___util_deprecate_1.0.2.tgz"; + path = fetchurl { + name = "util_deprecate___util_deprecate_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/util-deprecate/-/util-deprecate-1.0.2.tgz"; + sha1 = "450d4dc9fa70de732762fbd2d4a28981419a0ccf"; + }; + } + { + name = "verror___verror_1.10.0.tgz"; + path = fetchurl { + name = "verror___verror_1.10.0.tgz"; + url = "https://registry.yarnpkg.com/verror/-/verror-1.10.0.tgz"; + sha1 = "3a105ca17053af55d6e270c1f8288682e18da400"; + }; + } + { + name = "which___which_1.3.1.tgz"; + path = fetchurl { + name = "which___which_1.3.1.tgz"; + url = "https://registry.yarnpkg.com/which/-/which-1.3.1.tgz"; + sha1 = "a45043d54f5805316da8d62f9f50918d3da70b0a"; + }; + } + { + name = "which___which_2.0.2.tgz"; + path = fetchurl { + name = "which___which_2.0.2.tgz"; + url = "https://registry.yarnpkg.com/which/-/which-2.0.2.tgz"; + sha1 = "7c6a8dd0a636a0327e10b59c9286eee93f3f51b1"; + }; + } + { + name = "widest_line___widest_line_3.1.0.tgz"; + path = fetchurl { + name = "widest_line___widest_line_3.1.0.tgz"; + url = "https://registry.yarnpkg.com/widest-line/-/widest-line-3.1.0.tgz"; + sha1 = "8292333bbf66cb45ff0de1603b136b7ae1496eca"; + }; + } + { + name = "wrap_ansi___wrap_ansi_7.0.0.tgz"; + path = fetchurl { + name = "wrap_ansi___wrap_ansi_7.0.0.tgz"; + url = "https://registry.yarnpkg.com/wrap-ansi/-/wrap-ansi-7.0.0.tgz"; + sha1 = "67e145cff510a6a6984bdf1152911d69d2eb9e43"; + }; + } + { + name = "wrappy___wrappy_1.0.2.tgz"; + path = fetchurl { + name = "wrappy___wrappy_1.0.2.tgz"; + url = "https://registry.yarnpkg.com/wrappy/-/wrappy-1.0.2.tgz"; + sha1 = "b5243d8f3ec1aa35f1364605bc0d1036e30ab69f"; + }; + } + { + name = "write_file_atomic___write_file_atomic_3.0.3.tgz"; + path = fetchurl { + name = "write_file_atomic___write_file_atomic_3.0.3.tgz"; + url = "https://registry.yarnpkg.com/write-file-atomic/-/write-file-atomic-3.0.3.tgz"; + sha1 = "56bd5c5a5c70481cd19c571bd39ab965a5de56e8"; + }; + } + { + name = "ws___ws_7.4.6.tgz"; + path = fetchurl { + name = "ws___ws_7.4.6.tgz"; + url = "https://registry.yarnpkg.com/ws/-/ws-7.4.6.tgz"; + sha1 = "5654ca8ecdeee47c33a9a4bf6d28e2be2980377c"; + }; + } + { + name = "xdg_basedir___xdg_basedir_4.0.0.tgz"; + path = fetchurl { + name = "xdg_basedir___xdg_basedir_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/xdg-basedir/-/xdg-basedir-4.0.0.tgz"; + sha1 = "4bc8d9984403696225ef83a1573cbbcb4e79db13"; + }; + } + { + name = "xmlbuilder___xmlbuilder_15.1.1.tgz"; + path = fetchurl { + name = "xmlbuilder___xmlbuilder_15.1.1.tgz"; + url = "https://registry.yarnpkg.com/xmlbuilder/-/xmlbuilder-15.1.1.tgz"; + sha1 = "9dcdce49eea66d8d10b42cae94a79c3c8d0c2ec5"; + }; + } + { + name = "xmlbuilder___xmlbuilder_9.0.7.tgz"; + path = fetchurl { + name = "xmlbuilder___xmlbuilder_9.0.7.tgz"; + url = "https://registry.yarnpkg.com/xmlbuilder/-/xmlbuilder-9.0.7.tgz"; + sha1 = "132ee63d2ec5565c557e20f4c22df9aca686b10d"; + }; + } + { + name = "y18n___y18n_5.0.8.tgz"; + path = fetchurl { + name = "y18n___y18n_5.0.8.tgz"; + url = "https://registry.yarnpkg.com/y18n/-/y18n-5.0.8.tgz"; + sha1 = "7f4934d0f7ca8c56f95314939ddcd2dd91ce1d55"; + }; + } + { + name = "yallist___yallist_4.0.0.tgz"; + path = fetchurl { + name = "yallist___yallist_4.0.0.tgz"; + url = "https://registry.yarnpkg.com/yallist/-/yallist-4.0.0.tgz"; + sha1 = "9bb92790d9c0effec63be73519e11a35019a3a72"; + }; + } + { + name = "yargs_parser___yargs_parser_20.2.9.tgz"; + path = fetchurl { + name = "yargs_parser___yargs_parser_20.2.9.tgz"; + url = "https://registry.yarnpkg.com/yargs-parser/-/yargs-parser-20.2.9.tgz"; + sha1 = "2eb7dc3b0289718fc295f362753845c41a0c94ee"; + }; + } + { + name = "yargs___yargs_17.1.1.tgz"; + path = fetchurl { + name = "yargs___yargs_17.1.1.tgz"; + url = "https://registry.yarnpkg.com/yargs/-/yargs-17.1.1.tgz"; + sha1 = "c2a8091564bdb196f7c0a67c1d12e5b85b8067ba"; + }; + } + { + name = "yauzl___yauzl_2.10.0.tgz"; + path = fetchurl { + name = "yauzl___yauzl_2.10.0.tgz"; + url = "https://registry.yarnpkg.com/yauzl/-/yauzl-2.10.0.tgz"; + sha1 = "c7eb17c93e112cb1086fa6d8e51fb0667b79a5f9"; + }; + } + ]; +} diff --git a/pkgs/tools/misc/viddy/default.nix b/pkgs/tools/misc/viddy/default.nix new file mode 100644 index 00000000000..1b9158df1ae --- /dev/null +++ b/pkgs/tools/misc/viddy/default.nix @@ -0,0 +1,29 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "viddy"; + version = "0.3.1"; + + src = fetchFromGitHub { + owner = "sachaos"; + repo = pname; + rev = "v${version}"; + sha256 = "18ms4kfv332863vd8b7mmrz39y4b8gvhi6lx9x5385jfzd19w5wx"; + }; + + vendorSha256 = "0789wq4d9cynyadvlwahs4586gc3p78gdpv5wf733lpv1h5rjbv3"; + + ldflags = [ + "-s" + "-w" + "-X" + "main.version=${version}" + ]; + + meta = with lib; { + description = "A modern watch command"; + homepage = "https://github.com/sachaos/viddy"; + license = licenses.mit; + maintainers = with maintainers; [ j-hui ]; + }; +} diff --git a/pkgs/tools/networking/boundary/default.nix b/pkgs/tools/networking/boundary/default.nix index c55eeff8c10..4f7b76ad8c7 100644 --- a/pkgs/tools/networking/boundary/default.nix +++ b/pkgs/tools/networking/boundary/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { pname = "boundary"; - version = "0.6.1"; + version = "0.6.2"; src = let @@ -14,9 +14,9 @@ stdenv.mkDerivation rec { x86_64-darwin = "darwin_amd64"; }; sha256 = selectSystem { - x86_64-linux = "sha256-E+AQhm2ddaDU8G0KuK0dC4wUU4YFELwO/q+8d2kpnV8="; - aarch64-linux = "sha256-RG4hazKsuUCYYBfDJ9OWghHlBNLEaxVOz5YGHP+ySbA="; - x86_64-darwin = "sha256-h0EjoEU+U3HQhmnPBKGijFJrkg9yPPP7zyWNbrn2e5Q="; + x86_64-linux = "sha256-qO74R6L2kTHXCNtka9SHT4lZo4Gr15w6K3e43+p2HW4="; + aarch64-linux = "sha256-apd16BuusNI5P2Qr8Hj95dRwoAk/ZEZa6TQi+0paIzs="; + x86_64-darwin = "sha256-LdCakVru1sbB88plsGrJiMDQl5HtH1GkCkcjmIVjeec="; }; in fetchzip { diff --git a/pkgs/tools/networking/dnsviz/default.nix b/pkgs/tools/networking/dnsviz/default.nix index ba31aba8d6c..aebf7e3cd14 100644 --- a/pkgs/tools/networking/dnsviz/default.nix +++ b/pkgs/tools/networking/dnsviz/default.nix @@ -8,13 +8,13 @@ buildPythonApplication rec { pname = "dnsviz"; - version = "0.9.3"; + version = "0.9.4"; src = fetchFromGitHub { owner = "dnsviz"; repo = "dnsviz"; rev = "v${version}"; - sha256 = "sha256-QsTYpNaAJiIRUrr2JYjXWOKFihENhAccvmB/DRhX1PA="; + sha256 = "sha256-x6LdPVQFfsJIuKde1+LbFKz5bBEi+Mri9sVH0nGsbCU="; }; patches = [ diff --git a/pkgs/tools/networking/getmail6/default.nix b/pkgs/tools/networking/getmail6/default.nix index dc36a7d124a..045ead7569d 100644 --- a/pkgs/tools/networking/getmail6/default.nix +++ b/pkgs/tools/networking/getmail6/default.nix @@ -5,13 +5,13 @@ python3.pkgs.buildPythonApplication rec { pname = "getmail6"; - version = "6.18.3"; + version = "6.18.4"; src = fetchFromGitHub { owner = pname; repo = pname; rev = "v${version}"; - sha256 = "sha256-8tBSi9QzWcVL09j6aa2yWFhLlqaI6DREX2PpKvHC3qU="; + sha256 = "1pxrwqpg8vnrrljigzzaq8g2g6nx55x7a8q032bp4wqyhc6jhpxq"; }; # needs a Docker setup diff --git a/pkgs/tools/networking/httpie/default.nix b/pkgs/tools/networking/httpie/default.nix index a7ecabe8e62..e81706a3435 100644 --- a/pkgs/tools/networking/httpie/default.nix +++ b/pkgs/tools/networking/httpie/default.nix @@ -1,88 +1,67 @@ -{ lib, fetchFromGitHub, python3Packages, docutils }: +{ lib +, fetchFromGitHub +, installShellFiles +, python3Packages +, pandoc +}: python3Packages.buildPythonApplication rec { pname = "httpie"; - version = "2.4.0"; + version = "2.5.0"; src = fetchFromGitHub { owner = "httpie"; repo = "httpie"; rev = version; - sha256 = "00lafjqg9nfnak0nhcr2l2hzzkwn2y6qv0wdkm6r6f69snizy3hf"; + sha256 = "sha256-GwwZLXf9CH024gKfWsYPnr/oqQcxR/lQIToFRh59B+E="; }; - patches = [ - ./strip-venv.patch + nativeBuildInputs = [ + installShellFiles + pandoc ]; - outputs = [ "out" "doc" "man" ]; - - nativeBuildInputs = [ docutils ]; - - propagatedBuildInputs = with python3Packages; [ pygments requests requests-toolbelt setuptools ]; + propagatedBuildInputs = with python3Packages; [ + defusedxml + pygments + requests + requests-toolbelt + setuptools + ]; checkInputs = with python3Packages; [ mock pytest pytest-httpbin pytestCheckHook + responses ]; postInstall = '' # install completions - install -Dm555 \ - extras/httpie-completion.bash \ - $out/share/bash-completion/completions/http.bash - install -Dm555 \ - extras/httpie-completion.fish \ - $out/share/fish/vendor_completions.d/http.fish - - mkdir -p $man/share/man/man1 - - docdir=$doc/share/doc/httpie - mkdir -p $docdir/html - - cp AUTHORS.rst CHANGELOG.rst CONTRIBUTING.rst $docdir - - # helpfully, the readme has a `no-web` class to exclude - # the parts that are not relevant for offline docs - - # this one build link was not marked however - sed -e 's/^|build|//g' -i README.rst - - toHtml() { - rst2html5 \ - --strip-elements-with-class=no-web \ - --title=http \ - --no-generator \ - --no-datestamp \ - --no-source-link \ - "$1" \ - "$2" - } - - toHtml README.rst $docdir/html/index.html - toHtml CHANGELOG.rst $docdir/html/CHANGELOG.html - toHtml CONTRIBUTING.rst $docdir/html/CONTRIBUTING.html - - rst2man \ - --strip-elements-with-class=no-web \ - --title=http \ - --no-generator \ - --no-datestamp \ - --no-source-link \ - README.rst \ - $man/share/man/man1/http.1 + installShellCompletion --bash \ + --name http.bash extras/httpie-completion.bash + installShellCompletion --fish \ + --name http.fish extras/httpie-completion.fish + + # convert the docs/README.md file + pandoc --standalone -f markdown -t man docs/README.md -o docs/http.1 + installManPage docs/http.1 ''; - # the tests call rst2pseudoxml.py from docutils - preCheck = '' - export PATH=${docutils}/bin:$PATH - ''; + pytestFlagsArray = [ + "httpie" + "tests" + ]; - checkPhase = '' - py.test ./httpie ./tests --doctest-modules --verbose ./httpie ./tests -k 'not test_chunked and not test_verbose_chunked and not test_multipart_chunked and not test_request_body_from_file_by_path_chunked' - ''; + disabledTests = [ + "test_chunked" + "test_verbose_chunked" + "test_multipart_chunked" + "test_request_body_from_file_by_path_chunked" + ]; + + pythonImportsCheck = [ "httpie" ]; meta = with lib; { description = "A command line HTTP client whose goal is to make CLI human-friendly"; diff --git a/pkgs/tools/networking/openapi-generator-cli/default.nix b/pkgs/tools/networking/openapi-generator-cli/default.nix index 606b3b4ee9e..e3491460e0a 100644 --- a/pkgs/tools/networking/openapi-generator-cli/default.nix +++ b/pkgs/tools/networking/openapi-generator-cli/default.nix @@ -1,7 +1,7 @@ { callPackage, lib, stdenv, fetchurl, jre, makeWrapper }: let this = stdenv.mkDerivation rec { - version = "5.2.0"; + version = "5.2.1"; pname = "openapi-generator-cli"; jarfilename = "${pname}-${version}.jar"; @@ -12,7 +12,7 @@ let this = stdenv.mkDerivation rec { src = fetchurl { url = "mirror://maven/org/openapitools/${pname}/${version}/${jarfilename}"; - sha256 = "sha256-mZYGCIR7XOvONnNFDM86qSM7iug48noNgBcHdik81vk="; + sha256 = "sha256-stRtSZCvPUQuTiKOHmJ7k8o3Gtly9Up+gicrDOeWjIs="; }; dontUnpack = true; diff --git a/pkgs/tools/networking/privoxy/default.nix b/pkgs/tools/networking/privoxy/default.nix index 9fce8d7a5f4..9fc159d810c 100644 --- a/pkgs/tools/networking/privoxy/default.nix +++ b/pkgs/tools/networking/privoxy/default.nix @@ -2,7 +2,7 @@ , nixosTests , fetchurl, autoreconfHook , zlib, pcre, w3m, man -, mbedtls, brotli +, openssl, brotli }: stdenv.mkDerivation rec { @@ -18,11 +18,11 @@ stdenv.mkDerivation rec { hardeningEnable = [ "pie" ]; nativeBuildInputs = [ autoreconfHook w3m man ]; - buildInputs = [ zlib pcre mbedtls brotli ]; + buildInputs = [ zlib pcre openssl brotli ]; makeFlags = [ "STRIP=" ]; configureFlags = [ - "--with-mbedtls" + "--with-openssl" "--with-brotli" "--enable-external-filters" "--enable-compression" @@ -39,7 +39,7 @@ stdenv.mkDerivation rec { description = "Non-caching web proxy with advanced filtering capabilities"; # When linked with mbedtls, the license becomes GPLv3 (or later), otherwise # GPLv2 (or later). See https://www.privoxy.org/user-manual/copyright.html - license = licenses.gpl3Plus; + license = licenses.gpl2Plus; platforms = platforms.all; maintainers = [ maintainers.phreedom ]; }; diff --git a/pkgs/tools/networking/rustcat/default.nix b/pkgs/tools/networking/rustcat/default.nix new file mode 100644 index 00000000000..f35a91722f0 --- /dev/null +++ b/pkgs/tools/networking/rustcat/default.nix @@ -0,0 +1,29 @@ +{ lib +, stdenv +, fetchFromGitHub +, rustPlatform +, Security +}: + +rustPlatform.buildRustPackage rec { + pname = "rustcat"; + version = "1.3.0"; + + src = fetchFromGitHub { + owner = "robiot"; + repo = pname; + rev = "v${version}"; + sha256 = "0f4g0fk3i9p403r21w1cdz4r9778pkz58y8h7w2fmj27bamsyfhb"; + }; + + cargoSha256 = "0zlgnnlnglix0qrjc5v0g91v083lm20iw1fhvjpvjlfq7shdkhyd"; + + buildInputs = lib.optional stdenv.isDarwin Security; + + meta = with lib; { + description = "Port listener and reverse shell"; + homepage = "https://github.com/robiot/rustcat"; + license = licenses.mit; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/tools/networking/s6-dns/default.nix b/pkgs/tools/networking/s6-dns/default.nix index a4ebf5beef9..0a7307b6293 100644 --- a/pkgs/tools/networking/s6-dns/default.nix +++ b/pkgs/tools/networking/s6-dns/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-dns"; - version = "2.3.5.1"; - sha256 = "0qsgqwdr5ms337fc9f2b4aa5cr7myvbzndvgkgswnrdwszjm078c"; + version = "2.3.5.2"; + sha256 = "0nczzjprvp6wirzycgf5h32dlgx4r8grzkqhif27n3ii6f5g78yw"; description = "A suite of DNS client programs and libraries for Unix systems"; diff --git a/pkgs/tools/networking/s6-networking/default.nix b/pkgs/tools/networking/s6-networking/default.nix index e0c8eda9c74..42f7187fabe 100644 --- a/pkgs/tools/networking/s6-networking/default.nix +++ b/pkgs/tools/networking/s6-networking/default.nix @@ -19,8 +19,8 @@ assert sslSupportEnabled -> sslLibs ? ${sslSupport}; buildPackage { pname = "s6-networking"; - version = "2.4.1.1"; - sha256 = "0m55ibx7k2wgrqbpci1n667ij0h925ajzggxalq2pj65kmwcmyx3"; + version = "2.5.0.0"; + sha256 = "1fn3g9gkwgmnxallhk82f5rly81pnkilj7n49g5fbfmaalsq96mh"; description = "A suite of small networking utilities for Unix systems"; @@ -57,7 +57,6 @@ buildPackage { postInstall = '' # remove all s6 executables from build directory rm $(find -name "s6-*" -type f -mindepth 1 -maxdepth 1 -executable) - rm minidentd rm libs6net.* libstls.* libs6tls.* libsbearssl.* mv doc $doc/share/doc/s6-networking/html diff --git a/pkgs/tools/networking/ytcc/default.nix b/pkgs/tools/networking/ytcc/default.nix index 38bb5c06607..3fe1e77fca2 100644 --- a/pkgs/tools/networking/ytcc/default.nix +++ b/pkgs/tools/networking/ytcc/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { pname = "ytcc"; - version = "2.3.0"; + version = "2.4.1"; src = fetchFromGitHub { owner = "woefe"; repo = "ytcc"; rev = "v${version}"; - sha256 = "1q0w3b7r93416s28qra608n0d7cjh95nwkzgg23z5hp5sq3w3izr"; + sha256 = "00fx1zlfz4gj46ahgvawc21rx6s49qrzd8am3p2yzmc12ibfqyhv"; }; nativeBuildInputs = [ gettext ]; diff --git a/pkgs/development/python-modules/cve-bin-tool/default.nix b/pkgs/tools/security/cve-bin-tool/default.nix index 61ae8976815..fac92262875 100644 --- a/pkgs/development/python-modules/cve-bin-tool/default.nix +++ b/pkgs/tools/security/cve-bin-tool/default.nix @@ -1,5 +1,5 @@ { lib -, buildPythonPackage +, buildPythonApplication , fetchFromGitHub , jsonschema , plotly @@ -18,6 +18,7 @@ , rich , aiohttp , toml +, distro # aiohttp[speedups] , aiodns , brotlipy @@ -25,15 +26,15 @@ , pillow , pytestCheckHook }: -buildPythonPackage { +buildPythonApplication rec { pname = "cve-bin-tool"; - version = "unstable-2021-04-15"; + version = "2.2.1"; src = fetchFromGitHub { owner = "intel"; repo = "cve-bin-tool"; - rev = "10cb6fd0baffe35babfde024bc8c70aa58629237"; - sha256 = "STf0tJBpadBqsbC+MghBai8zahDkrXfLoFRJ+84wvvY="; + rev = "v${version}"; + sha256 = "087w7fsc4vd4sjz8ww6q71b108yhz94ydr76d99rhlmcqsq7fihs"; }; # Wants to open a sqlite database, access the internet, etc @@ -57,7 +58,7 @@ buildPythonPackage { rich aiohttp toml - + distro # aiohttp[speedups] aiodns brotlipy diff --git a/pkgs/tools/security/dalfox/default.nix b/pkgs/tools/security/dalfox/default.nix index 82a1f7e583a..9303058b380 100644 --- a/pkgs/tools/security/dalfox/default.nix +++ b/pkgs/tools/security/dalfox/default.nix @@ -5,16 +5,16 @@ buildGoModule rec { pname = "dalfox"; - version = "2.4.9"; + version = "2.5.2"; src = fetchFromGitHub { owner = "hahwul"; repo = pname; rev = "v${version}"; - sha256 = "1g0bafg3lgsqy8mjyzvvy9l1wp1rxqwpba3dkx6xisjkpbycxql8"; + sha256 = "sha256-/tS9/VxH5r4CSmxZ7uZOgAMLRtmPs+bgPtvljOhLALc="; }; - vendorSha256 = "1mw58zbihw2fzbpqwydfrrkcwqjkjqdzp37m4dijhx1pbzkv9gzl"; + vendorSha256 = "sha256-AZbzcGqje2u9waH2NGWITXpax2GCFqbIEd4uNiDmcIY="; meta = with lib; { description = "Tool for analysing parameter and XSS scanning"; diff --git a/pkgs/tools/security/exploitdb/default.nix b/pkgs/tools/security/exploitdb/default.nix index a2d0ac08d5e..6bdb52d6819 100644 --- a/pkgs/tools/security/exploitdb/default.nix +++ b/pkgs/tools/security/exploitdb/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "exploitdb"; - version = "2021-09-22"; + version = "2021-09-29"; src = fetchFromGitHub { owner = "offensive-security"; repo = pname; rev = version; - sha256 = "sha256-axA20Ok+5LgtW4Mf1xMM64Gd6C6joBC5isUdZPncgDw="; + sha256 = "sha256-7SV7qLREyOPCTn9CFjxmdfIJUb4VO82KsUQvVKPfEpA="; }; installPhase = '' diff --git a/pkgs/tools/security/go365/default.nix b/pkgs/tools/security/go365/default.nix new file mode 100644 index 00000000000..432dfb49da1 --- /dev/null +++ b/pkgs/tools/security/go365/default.nix @@ -0,0 +1,29 @@ +{ lib +, buildGoModule +, fetchFromGitHub +}: + +buildGoModule rec { + pname = "go365"; + version = "1.4"; + + src = fetchFromGitHub { + owner = "optiv"; + repo = "Go365"; + rev = version; + sha256 = "0dh89hf00fr62gjdw2lb1ncdxd26nvlsh2s0i6981bp8xfg2pk5r"; + }; + + vendorSha256 = "0fx2966xfzmi8yszw1cq6ind3i2dvacdwfs029v3bq0n8bvbm3r2"; + + postInstall = '' + mv $out/bin/Go365 $out/bin/$pname + ''; + + meta = with lib; { + description = "Office 365 enumeration tool"; + homepage = "https://github.com/optiv/Go365"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/tools/security/ioccheck/default.nix b/pkgs/tools/security/ioccheck/default.nix new file mode 100644 index 00000000000..1ad7bfd85fe --- /dev/null +++ b/pkgs/tools/security/ioccheck/default.nix @@ -0,0 +1,57 @@ +{ lib +, fetchFromGitHub +, python3 +}: + +python3.pkgs.buildPythonApplication rec { + pname = "ioccheck"; + version = "unstable-2021-09-29"; + format = "pyproject"; + + disabled = python3.pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "ranguli"; + repo = pname; + rev = "db02d921e2519b77523a200ca2d78417802463db"; + sha256 = "0lgqypcd5lzb2yqd5lr02pba24m26ghly4immxgz13svi8f6vzm9"; + }; + + nativeBuildInputs = with python3.pkgs; [ + poetry-core + ]; + + propagatedBuildInputs = with python3.pkgs; [ + backoff + click + emoji + jinja2 + pyfiglet + ratelimit + requests + shodan + tabulate + termcolor + tweepy + vt-py + ]; + + checkInputs = with python3.pkgs; [ + pytestCheckHook + ]; + + postPatch = '' + # Can be removed with the next release + substituteInPlace pyproject.toml \ + --replace '"hurry.filesize" = "^0.9"' "" + ''; + + pythonImportsCheck = [ "ioccheck" ]; + + meta = with lib; { + description = "Tool for researching IOCs"; + homepage = "https://github.com/ranguli/ioccheck"; + license = with licenses; [ mit ]; + maintainers = with maintainers; [ fab ]; + }; +} diff --git a/pkgs/tools/security/kubescape/default.nix b/pkgs/tools/security/kubescape/default.nix index 2bf6bb8cad6..43046ab9037 100644 --- a/pkgs/tools/security/kubescape/default.nix +++ b/pkgs/tools/security/kubescape/default.nix @@ -5,13 +5,13 @@ buildGoModule rec { pname = "kubescape"; - version = "1.0.85"; + version = "1.0.88"; src = fetchFromGitHub { owner = "armosec"; repo = pname; rev = "v${version}"; - sha256 = "19r7dgr0y1k9qa4llxbgaf69j88vs9h2gx29bwbh6dq17q58sfdl"; + sha256 = "sha256-ITN/HsXZWH1v23R5TSEd8vq/DkhiCypJM+hg879ZWlc="; }; vendorSha256 = "18mvv70g65pq1c7nn752j26d0vasx6cl2rqp5g1hg3cb61hjbn0n"; diff --git a/pkgs/tools/security/masscan/default.nix b/pkgs/tools/security/masscan/default.nix index 891311ddaa0..46bae3c20c5 100644 --- a/pkgs/tools/security/masscan/default.nix +++ b/pkgs/tools/security/masscan/default.nix @@ -19,23 +19,29 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper installShellFiles ]; - makeFlags = [ "PREFIX=$(out)" "GITVER=${version}" "CC=${stdenv.cc.targetPrefix}cc" ]; + makeFlags = [ + "PREFIX=$(out)" + "GITVER=${version}" + "CC=${stdenv.cc.targetPrefix}cc" + ]; - preInstall = '' - mkdir -p $out/bin - ''; + enableParallelBuilding = true; postInstall = '' - installManPage doc/masscan.8 + installManPage doc/masscan.? + + install -Dm444 -t $out/etc/masscan data/exclude.conf + install -Dm444 -t $out/share/doc/masscan doc/*.{html,js,md} + install -Dm444 -t $out/share/licenses/masscan LICENSE - mkdir -p $out/share/{doc,licenses}/masscan - mkdir -p $out/etc/masscan + wrapProgram $out/bin/masscan \ + --prefix LD_LIBRARY_PATH : "${libpcap}/lib" + ''; - cp data/exclude.conf $out/etc/masscan - cp -t $out/share/doc/masscan doc/algorithm.js doc/howto-afl.md doc/bot.html - cp LICENSE $out/share/licenses/masscan/LICENSE + doInstallCheck = true; - wrapProgram $out/bin/masscan --prefix LD_LIBRARY_PATH : "${libpcap}/lib" + installCheckPhase = '' + $out/bin/masscan --selftest ''; meta = with lib; { diff --git a/pkgs/tools/security/metasploit/Gemfile b/pkgs/tools/security/metasploit/Gemfile index 5af7eca1387..cca97913913 100644 --- a/pkgs/tools/security/metasploit/Gemfile +++ b/pkgs/tools/security/metasploit/Gemfile @@ -1,4 +1,4 @@ # frozen_string_literal: true source "https://rubygems.org" -gem "metasploit-framework", git: "https://github.com/rapid7/metasploit-framework", ref: "refs/tags/6.0.56" +gem "metasploit-framework", git: "https://github.com/rapid7/metasploit-framework", ref: "refs/tags/6.1.7" diff --git a/pkgs/tools/security/metasploit/Gemfile.lock b/pkgs/tools/security/metasploit/Gemfile.lock index 6fd30d8d6a8..3c744fb0843 100644 --- a/pkgs/tools/security/metasploit/Gemfile.lock +++ b/pkgs/tools/security/metasploit/Gemfile.lock @@ -1,12 +1,12 @@ GIT remote: https://github.com/rapid7/metasploit-framework - revision: d818269c546bd165c29652768cd2058fcb56c4fa - ref: refs/tags/6.0.56 + revision: 6dddd6d372c75acadc183f6a4efdd44e453559b4 + ref: refs/tags/6.1.7 specs: - metasploit-framework (6.0.56) - actionpack (~> 5.2.2) - activerecord (~> 5.2.2) - activesupport (~> 5.2.2) + metasploit-framework (6.1.7) + actionpack (~> 6.0) + activerecord (~> 6.0) + activesupport (~> 6.0) aws-sdk-ec2 aws-sdk-iam aws-sdk-s3 @@ -22,17 +22,17 @@ GIT faraday faye-websocket filesize - hrr_rb_ssh (= 0.3.0.pre2) + hrr_rb_ssh-ed25519 http-cookie irb jsobfu json metasm - metasploit-concern (~> 3.0.0) - metasploit-credential (~> 4.0.0) - metasploit-model (~> 3.1.0) - metasploit-payloads (= 2.0.50) - metasploit_data_models (~> 4.1.0) + metasploit-concern + metasploit-credential + metasploit-model + metasploit-payloads (= 2.0.54) + metasploit_data_models metasploit_payloads-mettle (= 1.0.10) mqtt msgpack @@ -47,7 +47,7 @@ GIT openvas-omp packetfu patch_finder - pcaprub + pcaprub (= 0.12.4) pdf-reader pg puma @@ -88,6 +88,7 @@ GIT unix-crypt warden windows_error + winrm xdr xmlrpc zeitwerk @@ -96,57 +97,56 @@ GEM remote: https://rubygems.org/ specs: Ascii85 (1.1.0) - actionpack (5.2.6) - actionview (= 5.2.6) - activesupport (= 5.2.6) - rack (~> 2.0, >= 2.0.8) + actionpack (6.1.4.1) + actionview (= 6.1.4.1) + activesupport (= 6.1.4.1) + rack (~> 2.0, >= 2.0.9) rack-test (>= 0.6.3) rails-dom-testing (~> 2.0) - rails-html-sanitizer (~> 1.0, >= 1.0.2) - actionview (5.2.6) - activesupport (= 5.2.6) + rails-html-sanitizer (~> 1.0, >= 1.2.0) + actionview (6.1.4.1) + activesupport (= 6.1.4.1) builder (~> 3.1) erubi (~> 1.4) rails-dom-testing (~> 2.0) - rails-html-sanitizer (~> 1.0, >= 1.0.3) - activemodel (5.2.6) - activesupport (= 5.2.6) - activerecord (5.2.6) - activemodel (= 5.2.6) - activesupport (= 5.2.6) - arel (>= 9.0) - activesupport (5.2.6) + rails-html-sanitizer (~> 1.1, >= 1.2.0) + activemodel (6.1.4.1) + activesupport (= 6.1.4.1) + activerecord (6.1.4.1) + activemodel (= 6.1.4.1) + activesupport (= 6.1.4.1) + activesupport (6.1.4.1) concurrent-ruby (~> 1.0, >= 1.0.2) - i18n (>= 0.7, < 2) - minitest (~> 5.1) - tzinfo (~> 1.1) + i18n (>= 1.6, < 2) + minitest (>= 5.1) + tzinfo (~> 2.0) + zeitwerk (~> 2.3) addressable (2.8.0) public_suffix (>= 2.0.2, < 5.0) afm (0.2.2) - arel (9.0.0) - arel-helpers (2.12.0) + arel-helpers (2.12.1) activerecord (>= 3.1.0, < 7) - aws-eventstream (1.1.1) - aws-partitions (1.484.0) - aws-sdk-core (3.119.0) + aws-eventstream (1.2.0) + aws-partitions (1.506.0) + aws-sdk-core (3.121.1) aws-eventstream (~> 1, >= 1.0.2) aws-partitions (~> 1, >= 1.239.0) aws-sigv4 (~> 1.1) jmespath (~> 1.0) - aws-sdk-ec2 (1.254.0) - aws-sdk-core (~> 3, >= 3.119.0) + aws-sdk-ec2 (1.265.0) + aws-sdk-core (~> 3, >= 3.120.0) aws-sigv4 (~> 1.1) - aws-sdk-iam (1.59.0) - aws-sdk-core (~> 3, >= 3.119.0) + aws-sdk-iam (1.61.0) + aws-sdk-core (~> 3, >= 3.120.0) aws-sigv4 (~> 1.1) - aws-sdk-kms (1.46.0) - aws-sdk-core (~> 3, >= 3.119.0) + aws-sdk-kms (1.48.0) + aws-sdk-core (~> 3, >= 3.120.0) aws-sigv4 (~> 1.1) - aws-sdk-s3 (1.98.0) - aws-sdk-core (~> 3, >= 3.119.0) + aws-sdk-s3 (1.103.0) + aws-sdk-core (~> 3, >= 3.120.0) aws-sdk-kms (~> 1) - aws-sigv4 (~> 1.1) - aws-sigv4 (1.2.4) + aws-sigv4 (~> 1.4) + aws-sigv4 (1.4.0) aws-eventstream (~> 1, >= 1.0.2) bcrypt (3.1.16) bcrypt_pbkdf (1.1.0) @@ -156,7 +156,7 @@ GEM concurrent-ruby (1.0.5) cookiejar (0.3.3) crass (1.0.6) - daemons (1.4.0) + daemons (1.4.1) dnsruby (1.61.7) simpleidn (~> 0.1) domain_name (0.5.20190701) @@ -172,9 +172,9 @@ GEM eventmachine (>= 1.0.0.beta.4) erubi (1.10.0) eventmachine (1.2.7) - faker (2.18.0) + faker (2.19.0) i18n (>= 1.6, < 2) - faraday (1.6.0) + faraday (1.8.0) faraday-em_http (~> 1.0) faraday-em_synchrony (~> 1.0) faraday-excon (~> 1.1) @@ -196,13 +196,21 @@ GEM faye-websocket (0.11.1) eventmachine (>= 0.12.0) websocket-driver (>= 0.5.1) + ffi (1.15.4) filesize (0.2.0) + gssapi (1.3.1) + ffi (>= 1.0.1) + gyoku (1.3.1) + builder (>= 2.1.2) hashery (2.1.2) - hrr_rb_ssh (0.3.0.pre2) + hrr_rb_ssh (0.4.2) + hrr_rb_ssh-ed25519 (0.4.2) ed25519 (~> 1.2) + hrr_rb_ssh (>= 0.4) http-cookie (1.0.4) domain_name (~> 0.5) - http_parser.rb (0.7.0) + http_parser.rb (0.8.0) + httpclient (2.8.3) i18n (1.8.10) concurrent-ruby (~> 1.0) io-console (0.5.9) @@ -212,37 +220,41 @@ GEM jsobfu (0.4.2) rkelly-remix json (2.5.1) - loofah (2.11.0) + little-plugger (1.1.4) + logging (2.3.0) + little-plugger (~> 1.1) + multi_json (~> 1.14) + loofah (2.12.0) crass (~> 1.0.2) nokogiri (>= 1.5.9) metasm (1.0.5) - metasploit-concern (3.0.2) - activemodel (~> 5.2.2) - activesupport (~> 5.2.2) - railties (~> 5.2.2) - metasploit-credential (4.0.5) + metasploit-concern (4.0.3) + activemodel (~> 6.0) + activesupport (~> 6.0) + railties (~> 6.0) + metasploit-credential (5.0.4) metasploit-concern metasploit-model - metasploit_data_models (>= 3.0.0) + metasploit_data_models (>= 5.0.0) net-ssh pg railties rex-socket rubyntlm rubyzip - metasploit-model (3.1.4) - activemodel (~> 5.2.2) - activesupport (~> 5.2.2) - railties (~> 5.2.2) - metasploit-payloads (2.0.50) - metasploit_data_models (4.1.4) - activerecord (~> 5.2.2) - activesupport (~> 5.2.2) + metasploit-model (4.0.3) + activemodel (~> 6.0) + activesupport (~> 6.0) + railties (~> 6.0) + metasploit-payloads (2.0.54) + metasploit_data_models (5.0.4) + activerecord (~> 6.0) + activesupport (~> 6.0) arel-helpers metasploit-concern metasploit-model (>= 3.1) pg - railties (~> 5.2.2) + railties (~> 6.0) recog (~> 2.0) webrick metasploit_payloads-mettle (1.0.10) @@ -251,6 +263,7 @@ GEM minitest (5.14.4) mqtt (0.5.0) msgpack (1.4.2) + multi_json (1.15.0) multipart-post (2.1.1) mustermann (1.1.1) ruby2_keywords (~> 0.0.1) @@ -260,9 +273,10 @@ GEM network_interface (0.0.2) nexpose (7.3.0) nio4r (2.5.8) - nokogiri (1.12.2) + nokogiri (1.12.4) mini_portile2 (~> 2.6.1) racc (~> 1.4) + nori (2.6.0) octokit (4.21.0) faraday (>= 0.9) sawyer (~> 0.8.0, >= 0.5.3) @@ -272,7 +286,7 @@ GEM packetfu (1.1.13) pcaprub patch_finder (1.0.2) - pcaprub (0.13.0) + pcaprub (0.12.4) pdf-reader (2.5.0) Ascii85 (~> 1.0) afm (~> 0.2.1) @@ -281,7 +295,7 @@ GEM ttfunk pg (1.2.3) public_suffix (4.0.6) - puma (5.4.0) + puma (5.5.0) nio4r (~> 2.0) racc (1.5.2) rack (2.2.3) @@ -292,14 +306,14 @@ GEM rails-dom-testing (2.0.3) activesupport (>= 4.2.0) nokogiri (>= 1.6) - rails-html-sanitizer (1.3.0) + rails-html-sanitizer (1.4.2) loofah (~> 2.3) - railties (5.2.6) - actionpack (= 5.2.6) - activesupport (= 5.2.6) + railties (6.1.4.1) + actionpack (= 6.1.4.1) + activesupport (= 6.1.4.1) method_source - rake (>= 0.8.7) - thor (>= 0.19.0, < 2.0) + rake (>= 0.13) + thor (~> 1.0) rake (13.0.6) rb-readline (0.5.5) recog (2.3.21) @@ -309,18 +323,18 @@ GEM io-console (~> 0.5) rex-arch (0.1.14) rex-text - rex-bin_tools (0.1.7) + rex-bin_tools (0.1.8) metasm rex-arch rex-core rex-struct2 rex-text rex-core (0.1.17) - rex-encoder (0.1.5) + rex-encoder (0.1.6) metasm rex-arch rex-text - rex-exploitation (0.1.27) + rex-exploitation (0.1.28) jsobfu metasm rex-arch @@ -334,25 +348,25 @@ GEM rex-arch rex-ole (0.1.7) rex-text - rex-powershell (0.1.92) + rex-powershell (0.1.93) rex-random_identifier rex-text ruby-rc4 - rex-random_identifier (0.1.7) + rex-random_identifier (0.1.8) rex-text rex-registry (0.1.4) rex-rop_builder (0.1.4) metasm rex-core rex-text - rex-socket (0.1.32) + rex-socket (0.1.33) rex-core rex-sslscan (0.1.6) rex-core rex-socket rex-text rex-struct2 (0.1.3) - rex-text (0.2.35) + rex-text (0.2.37) rex-zip (0.1.4) rex-text rexml (3.2.5) @@ -360,7 +374,7 @@ GEM ruby-macho (2.5.1) ruby-rc4 (0.1.5) ruby2_keywords (0.0.5) - ruby_smb (2.0.10) + ruby_smb (2.0.11) bindata openssl-ccm openssl-cmac @@ -386,16 +400,15 @@ GEM eventmachine (~> 1.0, >= 1.0.4) rack (>= 1, < 3) thor (1.1.0) - thread_safe (0.3.6) tilt (2.0.10) ttfunk (1.7.0) - tzinfo (1.2.9) - thread_safe (~> 0.1) - tzinfo-data (1.2021.1) + tzinfo (2.0.4) + concurrent-ruby (~> 1.0) + tzinfo-data (1.2021.2) tzinfo (>= 1.0.0) unf (0.1.4) unf_ext - unf_ext (0.0.7.7) + unf_ext (0.0.8) unix-crypt (1.3.0) warden (1.2.9) rack (>= 2.0.9) @@ -404,6 +417,15 @@ GEM websocket-extensions (>= 0.1.0) websocket-extensions (0.1.5) windows_error (0.1.2) + winrm (2.3.6) + builder (>= 2.1.2) + erubi (~> 1.8) + gssapi (~> 1.2) + gyoku (~> 1.0) + httpclient (~> 2.2, >= 2.2.0.2) + logging (>= 1.6.1, < 3.0) + nori (~> 2.0) + rubyntlm (~> 0.6.0, >= 0.6.3) xdr (3.0.2) activemodel (>= 4.2, < 7.0) activesupport (>= 4.2, < 7.0) @@ -418,4 +440,4 @@ DEPENDENCIES metasploit-framework! BUNDLED WITH - 2.2.20 + 2.2.24 diff --git a/pkgs/tools/security/metasploit/default.nix b/pkgs/tools/security/metasploit/default.nix index ee103195923..afd852f106e 100644 --- a/pkgs/tools/security/metasploit/default.nix +++ b/pkgs/tools/security/metasploit/default.nix @@ -1,4 +1,10 @@ -{ lib, stdenv, fetchFromGitHub, makeWrapper, ruby, bundlerEnv }: +{ lib +, stdenv +, fetchFromGitHub +, makeWrapper +, ruby +, bundlerEnv +}: let env = bundlerEnv { @@ -8,13 +14,13 @@ let }; in stdenv.mkDerivation rec { pname = "metasploit-framework"; - version = "6.0.56"; + version = "6.1.7"; src = fetchFromGitHub { owner = "rapid7"; repo = "metasploit-framework"; rev = version; - sha256 = "sha256-FQxxQ4Lsoktl/Ld+nvBNHCTsZ3PFDQ4GEMrh/CMZrZ0="; + sha256 = "sha256-UzWNQnDo/o296GGd+C1ImHccOMAXfE55dJDB9hw9B8s="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/security/metasploit/gemset.nix b/pkgs/tools/security/metasploit/gemset.nix index 77b24688864..f985d592ca8 100644 --- a/pkgs/tools/security/metasploit/gemset.nix +++ b/pkgs/tools/security/metasploit/gemset.nix @@ -4,50 +4,50 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0b2xl458f2ygnjbvv0hacc8bk9qxbx64m2g7vw6f9y7k8q85930y"; + sha256 = "0xgysqnibjsy6kdz10x2xb3kwa6lssiqhh0zggrbgs31ypwhlpia"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; actionview = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "06f8212kplqhap9jpi49dvqlhwkfxxxm9nh8al6qjvl7mfh9qbzg"; + sha256 = "1yf4ic5kl324rs0raralpwx24s6hvvdzxfhinafylf8f3x7jj23z"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; activemodel = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1r28kcnzr8dm6idirndd8pvbmg5c678ijxk845g84ykq1l69czs6"; + sha256 = "16ixam4lni8b5lgx0whnax0imzh1dh10fy5r9pxs52n83yz5nbq3"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; activerecord = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "05qqnichgxml6z3d1dpgjy2fi62dppnqxgg37hr9a35hwhn05fzc"; + sha256 = "1ccgvlj767ybps3pxlaa4iw77n7wbriw2sr8754id3ngjfap08ja"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; activesupport = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1vybx4cj42hr6m8cdwbrqq2idh98zms8c11kr399xjczhl9ywjbj"; + sha256 = "19gx1jcq46x9d1pi1w8xq0bgvvfw239y4lalr8asm291gj3q3ds4"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; addressable = { groups = ["default"]; @@ -69,25 +69,15 @@ }; version = "0.2.2"; }; - arel = { - groups = ["default"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "1jk7wlmkr61f6g36w9s2sn46nmdg6wn2jfssrhbhirv5x9n95nk0"; - type = "gem"; - }; - version = "9.0.0"; - }; arel-helpers = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "12wgkhajfsm3fgk43zf7xyxrx7q2kc4ggq459p1az6p0b9jscarx"; + sha256 = "1733g96xxmmgjxambhnr98aj2yq401vgg0afyf46ayzgablij4cb"; type = "gem"; }; - version = "2.12.0"; + version = "2.12.1"; }; Ascii85 = { groups = ["default"]; @@ -104,80 +94,80 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0jfki5ikfr8ln5cdgv4iv1643kax0bjpp29jh78chzy713274jh3"; + sha256 = "1pyis1nvnbjxk12a43xvgj2gv0mvp4cnkc1gzw0v1018r61399gz"; type = "gem"; }; - version = "1.1.1"; + version = "1.2.0"; }; aws-partitions = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "012hf08bmzmk2sjynrgzfg0ssa26fkvjm47ixjnmb9byrqmh3mwr"; + sha256 = "1gfp7hqflr5gd3xfvcrwdmx4zzmhr6511bflwkfvrs5rn6n5dacs"; type = "gem"; }; - version = "1.484.0"; + version = "1.506.0"; }; aws-sdk-core = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1azyn5hj41q1r9wcr0k12xb9j3v1v9ikyxnzjpizhsla44lg3270"; + sha256 = "0njlpd4w008whz7bd7rrqs3k1m6xbm33hblzwh67pnk1frabv4q6"; type = "gem"; }; - version = "3.119.0"; + version = "3.121.1"; }; aws-sdk-ec2 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1i06ml61fr7qlxfbi98dg4lg40skjj5abfpz60jx7ml5dma13qma"; + sha256 = "1ymrwsc1caf9rfl5613w1xpckzx7v9l4y20dpmzzq72ih0y6lijn"; type = "gem"; }; - version = "1.254.0"; + version = "1.265.0"; }; aws-sdk-iam = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "16am0mpagfzi5n6gsnd4yyiwy8ni312b3kxswq0jvr3wh8ab0r5h"; + sha256 = "1m5cc26kkh83f6c05y2a07nfz3dsdvkdf7jfrjkrhlkmdq9hha0m"; type = "gem"; }; - version = "1.59.0"; + version = "1.61.0"; }; aws-sdk-kms = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0h70lz5pblw0sy82j6kv4q4d8h2rb1p6v650kaq8lh6iyjc6il9a"; + sha256 = "0aa7n3bad4h8sipzb31inc0q2r5k2nviaihmhqdv7mqnpylvcgia"; type = "gem"; }; - version = "1.46.0"; + version = "1.48.0"; }; aws-sdk-s3 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0799n1j8cxcn79k5zhy8vcpbh4q8vyi1fxqqs20sxh7yhyhrybw9"; + sha256 = "1xsa6nsdflwkm2wzmsr6kiy4am44f9f9459lbkrwxlcl166g05jq"; type = "gem"; }; - version = "1.98.0"; + version = "1.103.0"; }; aws-sigv4 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0cb9hsg0x9v4yk6sxif8968sg646qphmsjaqy9z8p7y3my5bkrf0"; + sha256 = "1wh1y79v0s4zgby2m79bnifk65hwf5pvk2yyrxzn2jkjjq8f8fqa"; type = "gem"; }; - version = "1.2.4"; + version = "1.4.0"; }; bcrypt = { groups = ["default"]; @@ -264,10 +254,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1fki1aipqafqlg8xy25ykk0ql1dciy9kk6lcp5gzgkh9ccmaxzf3"; + sha256 = "07cszb0zl8mqmwhc8a2yfg36vi6lbgrp4pa5bvmryrpcz9v6viwg"; type = "gem"; }; - version = "1.4.0"; + version = "1.4.1"; }; dnsruby = { groups = ["default"]; @@ -344,20 +334,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1hwir9b9zy0asy0vap7zfqv75lbws4a1pmh74lhqd2rndv32vfc5"; + sha256 = "0hb9wfxyb4ss2vl2mrj1zgdk7dh4yaxghq22gbx62yxj5yb9w4zw"; type = "gem"; }; - version = "2.18.0"; + version = "2.19.0"; }; faraday = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0xmi0yl9sniicvyh2k437dicvvzkryrc1ckr8dic84a98bbl32gy"; + sha256 = "0afhlqgby2cizcwgh7h2sq5f77q01axjbdl25bsvfwsry9n7gyyi"; type = "gem"; }; - version = "1.6.0"; + version = "1.8.0"; }; faraday-em_http = { groups = ["default"]; @@ -449,6 +439,16 @@ }; version = "0.11.1"; }; + ffi = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0ssxcywmb3flxsjdg13is6k01807zgzasdhj4j48dm7ac59cmksn"; + type = "gem"; + }; + version = "1.15.4"; + }; filesize = { groups = ["default"]; platforms = []; @@ -459,6 +459,26 @@ }; version = "0.2.0"; }; + gssapi = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1qdfhj12aq8v0y961v4xv96a1y2z80h3xhvzrs9vsfgf884g6765"; + type = "gem"; + }; + version = "1.3.1"; + }; + gyoku = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1wn0sl14396g5lyvp8sjmcb1hw9rbyi89gxng91r7w4df4jwiidh"; + type = "gem"; + }; + version = "1.3.1"; + }; hashery = { groups = ["default"]; platforms = []; @@ -474,10 +494,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "066dj9sw5p8aa54vqc1bw7a8nfpf5rggrjyxqw2ccyxp10964qkz"; + sha256 = "1dr6mv98ll0crdn2wm2yy9ywh130iljcsvnnvs6639k19qbfk7qf"; type = "gem"; }; - version = "0.3.0.pre2"; + version = "0.4.2"; + }; + hrr_rb_ssh-ed25519 = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1mfsvjcjmm63fwjf3zqkmg3cf55vx34vmvix0wj0ba4h9dzjq7p8"; + type = "gem"; + }; + version = "0.4.2"; }; http-cookie = { groups = ["default"]; @@ -494,10 +524,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1xha614fi6l04wryqjj1xmpalzlmhb6lb9qmlh8mmliycdhvcshp"; + sha256 = "1gj4fmls0mf52dlr928gaq0c0cb0m3aqa9kaa6l0ikl2zbqk42as"; + type = "gem"; + }; + version = "0.8.0"; + }; + httpclient = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "19mxmvghp7ki3klsxwrlwr431li7hm1lczhhj8z4qihl2acy8l99"; type = "gem"; }; - version = "0.7.0"; + version = "2.8.3"; }; i18n = { groups = ["default"]; @@ -559,15 +599,35 @@ }; version = "2.5.1"; }; + little-plugger = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1frilv82dyxnlg8k1jhrvyd73l6k17mxc5vwxx080r4x1p04gwym"; + type = "gem"; + }; + version = "1.1.4"; + }; + logging = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0pkmhcxi8lp74bq5gz9lxrvaiv5w0745kk7s4bw2b1x07qqri0n9"; + type = "gem"; + }; + version = "2.3.0"; + }; loofah = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0pwik3x5fa92g6hbv4imz3n46nlkzgj69pkgql22ppmcr36knk6m"; + sha256 = "1nqcya57x2n58y1dify60i0dpla40n4yir928khp4nj5jrn9mgmw"; type = "gem"; }; - version = "2.11.0"; + version = "2.12.0"; }; metasm = { groups = ["default"]; @@ -584,62 +644,62 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zbcnhji80cyj19jkdp8wpi1msg9xfm0lacpm8ggm8fca56234zv"; + sha256 = "0lmvwja6v7s12g0fq9mp2d3sgashl526apfjqk5fchqvnfqw4gsb"; type = "gem"; }; - version = "3.0.2"; + version = "4.0.3"; }; metasploit-credential = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wflb4r5mz2g29bzjpwc004h6vca9kd0z02v27wc378jgg6q0gna"; + sha256 = "1czh3a3bi54l5i7j9jw4p0arf8i3y8pm08w2f995x02rk4f7x5wf"; type = "gem"; }; - version = "4.0.5"; + version = "5.0.4"; }; metasploit-framework = { groups = ["default"]; platforms = []; source = { fetchSubmodules = false; - rev = "d818269c546bd165c29652768cd2058fcb56c4fa"; - sha256 = "17dd34izrqfa2030w3f5fdkyq90w9pq9wzmpzijlp8pch91p230m"; + rev = "6dddd6d372c75acadc183f6a4efdd44e453559b4"; + sha256 = "1jq77lfgdhchfiwlwz0pq0w1qxwq90nzi7b1x2yqvzp8f118sdak"; type = "git"; url = "https://github.com/rapid7/metasploit-framework"; }; - version = "6.0.56"; + version = "6.1.7"; }; metasploit-model = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "10ndgv4c30rq211f5lyngfcp87lxzgc9h8a7jx40wih43dj6faxq"; + sha256 = "13zg6jw8vbspq95s4dpcbjxnjiacy21il7y8l2dq3rd04mickryy"; type = "gem"; }; - version = "3.1.4"; + version = "4.0.3"; }; metasploit-payloads = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1wn6whvisps6fxd5fqbf6rr6znc3miqn8dwk3x8a6aycffphc75j"; + sha256 = "0javwkzhfngjdhz8rn566gli3a0jd1ns6hajim1nwwwiaici2bdc"; type = "gem"; }; - version = "2.0.50"; + version = "2.0.54"; }; metasploit_data_models = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1gzfvfqs9mf50dcnirc1944a25920s1swjd9g97d1x340651xmmr"; + sha256 = "12hnkrkgx89dskfr8ywpxk51y0nqnnj37qjz856f45z7ymx1nzip"; type = "gem"; }; - version = "4.1.4"; + version = "5.0.4"; }; metasploit_payloads-mettle = { groups = ["default"]; @@ -701,6 +761,16 @@ }; version = "1.4.2"; }; + multi_json = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0pb1g1y3dsiahavspyzkdy39j4q377009f6ix0bh1ag4nqw43l0z"; + type = "gem"; + }; + version = "1.15.0"; + }; multipart-post = { groups = ["default"]; platforms = []; @@ -782,14 +852,25 @@ version = "2.5.8"; }; nokogiri = { + dependencies = ["mini_portile2" "racc"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1iav4jrklvm8938bxhby0khs36mdndhvwia4hc85zxcb0yl1k8ll"; + sha256 = "1sad16idsxayhaaswc3bksii1ydiqyzikl7y0ng35cn7w4g1dv3z"; type = "gem"; }; - version = "1.12.2"; + version = "1.12.4"; + }; + nori = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "066wc774a2zp4vrq3k7k8p0fhv30ymqmxma1jj7yg5735zls8agn"; + type = "gem"; + }; + version = "2.6.0"; }; octokit = { groups = ["default"]; @@ -856,10 +937,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0h4iarqdych6v4jm5s0ywkc01qspadz8sf6qn7pkqmszq4iqv67q"; + sha256 = "0pl4lqy7308185pfv0197n8b4v20fhd0zb3wlpz284rk8ssclkvz"; type = "gem"; }; - version = "0.13.0"; + version = "0.12.4"; }; pdf-reader = { groups = ["default"]; @@ -896,10 +977,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0bz9y1hxfyv73yb26nvs2kcw08gxi7nxkfc94j82hgx2sifcnv3x"; + sha256 = "0ahk9a2a05985m0037gqlpha5vdkvmwhyk8v1shkbnwkkm30k0mq"; type = "gem"; }; - version = "5.4.0"; + version = "5.5.0"; }; racc = { groups = ["default"]; @@ -956,20 +1037,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1icpqmxbppl4ynzmn6dx7wdil5hhq6fz707m9ya6d86c7ys8sd4f"; + sha256 = "09qrfi3pgllxb08r024lln9k0qzxs57v0slsj8616xf9c0cwnwbk"; type = "gem"; }; - version = "1.3.0"; + version = "1.4.2"; }; railties = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0rs97fxv13hgpbmyhk8ag8qzgkh25css0797h90k9w1vg9djl84k"; + sha256 = "1kwpm068cqys34p2g0j3l1g0cd5f3kxnsay5v7lmbd0sgarac0vy"; type = "gem"; }; - version = "5.2.6"; + version = "6.1.4.1"; }; rake = { groups = ["default"]; @@ -1036,10 +1117,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "16w219ashxrgrgb5via9k45h7whrib77rmwy0f7akqf409pzjdp7"; + sha256 = "0p5r2h0zaixdjhp9k0jq0vgsvbhifx2jh3p9pr2w80qda1hkgqgj"; type = "gem"; }; - version = "0.1.7"; + version = "0.1.8"; }; rex-core = { groups = ["default"]; @@ -1056,20 +1137,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0lnrlii8d3r35927wp42bpdzh37dx3jqgdxk6lk5d6xvz6h14kp7"; + sha256 = "15c2yqrvn3hxf6gn4cqrz2l65rdh68gbk2a7lwdq43nchfjnsnvg"; type = "gem"; }; - version = "0.1.5"; + version = "0.1.6"; }; rex-exploitation = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1b10rcrw52nj2aswsn0kwv0s601rbn077k0r6n5lblip6fbrqz9i"; + sha256 = "08v5nam0xp6f8qi3nyqzh97sz07hy59w82y213jz919mrgpb70vc"; type = "gem"; }; - version = "0.1.27"; + version = "0.1.28"; }; rex-java = { groups = ["default"]; @@ -1116,20 +1197,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "02gpfw43r0pkzp7jj3n0lwn4lgbgkgadrn4p33x7b0xh1dalzgj1"; + sha256 = "1qpf4na2c57bypyxna7pqll8ym643cydh347v5zvlxknripjhjyz"; type = "gem"; }; - version = "0.1.92"; + version = "0.1.93"; }; rex-random_identifier = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1zaqndyy04c4fn021ibh05xim3wr7l2i71713amz6pvhgs2939r3"; + sha256 = "1zy8zkkv530iqzsc7apx4hq9ij30h5628slkmc80aqzva9z0fm0d"; type = "gem"; }; - version = "0.1.7"; + version = "0.1.8"; }; rex-registry = { groups = ["default"]; @@ -1156,10 +1237,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "03cvgmg0wswqcr70mhc6802vvgcg62f7vkbj0i7sskgy3cl9lryx"; + sha256 = "1kl221lsf1dk62vsf6fsgcx54crav0wgqsb9rwjxl7gfd7kmyz04"; type = "gem"; }; - version = "0.1.32"; + version = "0.1.33"; }; rex-sslscan = { groups = ["default"]; @@ -1186,10 +1267,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0idgw5z813h5dp82n07g5ldpyfnk7mhvnzl87d9fpy6invixnnbq"; + sha256 = "0xzym86blrah88qyi1m9f7pc53m6ssmr4d1znc8izbh90z38y51y"; type = "gem"; }; - version = "0.2.35"; + version = "0.2.37"; }; rex-zip = { groups = ["default"]; @@ -1256,10 +1337,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1h8p6ksfr9xhpj9p38b4mjj76zm4d0dg06hhp00ii9hh7vy6mryd"; + sha256 = "06szny4dcbwlcq2fki1fbrghsbk2dgwy3zyl9y8zjkf334yjb57k"; type = "gem"; }; - version = "2.0.10"; + version = "2.0.11"; }; rubyntlm = { groups = ["default"]; @@ -1361,16 +1442,6 @@ }; version = "1.1.0"; }; - thread_safe = { - groups = ["default"]; - platforms = []; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0nmhcgq6cgz44srylra07bmaw99f5271l0dpsvl5f75m44l0gmwy"; - type = "gem"; - }; - version = "0.3.6"; - }; tilt = { groups = ["default"]; platforms = []; @@ -1396,20 +1467,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zwqqh6138s8b321fwvfbywxy00lw1azw4ql3zr0xh1aqxf8cnvj"; + sha256 = "10qp5x7f9hvlc0psv9gsfbxg4a7s0485wsbq1kljkxq94in91l4z"; type = "gem"; }; - version = "1.2.9"; + version = "2.0.4"; }; tzinfo-data = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0ik16lnsyr2739jzwl4r5sz8q639lqw8f9s68iszwhm2pcq8p4w2"; + sha256 = "1a0d3smxpdn6i5vjc616wnva8c9nvh8mvsjyvwcxlsj1qsih2l21"; type = "gem"; }; - version = "1.2021.1"; + version = "1.2021.2"; }; unf = { groups = ["default"]; @@ -1426,10 +1497,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wc47r23h063l8ysws8sy24gzh74mks81cak3lkzlrw4qkqb3sg4"; + sha256 = "0jmbimpnpjdzz8hlrppgl9spm99qh3qzbx0b81k3gkgwba8nk3yd"; type = "gem"; }; - version = "0.0.7.7"; + version = "0.0.8"; }; unix-crypt = { groups = ["default"]; @@ -1491,6 +1562,16 @@ }; version = "0.1.2"; }; + winrm = { + groups = ["default"]; + platforms = []; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0nxf6a47d1xf1nvi7rbfbzjyyjhz0iakrnrsr2hj6y24a381sd8i"; + type = "gem"; + }; + version = "2.3.6"; + }; xdr = { groups = ["default"]; platforms = []; diff --git a/pkgs/tools/security/quill/default.nix b/pkgs/tools/security/quill/default.nix index 9f5465901b1..9cf0f2f0c09 100644 --- a/pkgs/tools/security/quill/default.nix +++ b/pkgs/tools/security/quill/default.nix @@ -2,13 +2,13 @@ rustPlatform.buildRustPackage rec { pname = "quill"; - version = "0.2.5"; + version = "0.2.7"; src = fetchFromGitHub { owner = "dfinity"; repo = "quill"; rev = "v${version}"; - sha256 = "sha256-lvINDtOG2mmz0ESxL11DQVZh3IcEiZYYMu5oN5Q9WKA="; + sha256 = "sha256-3OlsCRpxRDKlfC0sa9MlFCupyRbDuqJQzDb9SQob1O0="; }; ic = fetchFromGitHub { @@ -30,7 +30,7 @@ rustPlatform.buildRustPackage rec { export OPENSSL_LIB_DIR=${openssl.out}/lib ''; - cargoSha256 = "sha256-F2RMfHVFqCq9cb+9bjPWaRcQWKYIwwffWCssoQ6sSdU="; + cargoSha256 = "sha256-YxuBABGaZ+ti31seEYR6bB+OMgrSvl1lZyu4bqdxPIk="; nativeBuildInputs = [ pkg-config protobuf ]; buildInputs = [ openssl ] diff --git a/pkgs/tools/security/wpscan/Gemfile.lock b/pkgs/tools/security/wpscan/Gemfile.lock index 65e09d0aecf..23e4a17ea8a 100644 --- a/pkgs/tools/security/wpscan/Gemfile.lock +++ b/pkgs/tools/security/wpscan/Gemfile.lock @@ -1,19 +1,19 @@ GEM remote: https://rubygems.org/ specs: - activesupport (6.1.4) + activesupport (6.1.4.1) concurrent-ruby (~> 1.0, >= 1.0.2) i18n (>= 1.6, < 2) minitest (>= 5.1) tzinfo (~> 2.0) zeitwerk (~> 2.3) - addressable (2.7.0) + addressable (2.8.0) public_suffix (>= 2.0.2, < 5.0) - cms_scanner (0.13.5) + cms_scanner (0.13.6) ethon (~> 0.14.0) get_process_mem (~> 0.2.5) - nokogiri (~> 1.11.4) - opt_parse_validator (~> 1.9.4) + nokogiri (>= 1.11.4, < 1.13.0) + opt_parse_validator (~> 1.9.5) public_suffix (~> 4.0.3) ruby-progressbar (>= 1.10, < 1.12) sys-proctable (~> 1.2.2) @@ -23,19 +23,17 @@ GEM concurrent-ruby (1.1.9) ethon (0.14.0) ffi (>= 1.15.0) - ffi (1.15.3) + ffi (1.15.4) get_process_mem (0.2.7) ffi (~> 1.0) i18n (1.8.10) concurrent-ruby (~> 1.0) - mini_portile2 (2.5.3) minitest (5.14.4) - nokogiri (1.11.7) - mini_portile2 (~> 2.5.0) + nokogiri (1.12.4-x86_64-linux) racc (~> 1.4) - opt_parse_validator (1.9.4) + opt_parse_validator (1.9.5) activesupport (>= 5.2, < 6.2.0) - addressable (>= 2.5, < 2.8) + addressable (>= 2.5, < 2.9) public_suffix (4.0.6) racc (1.5.2) ruby-progressbar (1.11.0) @@ -46,18 +44,18 @@ GEM tzinfo (2.0.4) concurrent-ruby (~> 1.0) webrick (1.7.0) - wpscan (3.8.18) - cms_scanner (~> 0.13.5) + wpscan (3.8.19) + cms_scanner (~> 0.13.6) xmlrpc (0.3.2) webrick yajl-ruby (1.4.1) zeitwerk (2.4.2) PLATFORMS - ruby + x86_64-linux DEPENDENCIES wpscan BUNDLED WITH - 2.1.4 + 2.2.24 diff --git a/pkgs/tools/security/wpscan/default.nix b/pkgs/tools/security/wpscan/default.nix index 6a41611e67e..965c48b304f 100644 --- a/pkgs/tools/security/wpscan/default.nix +++ b/pkgs/tools/security/wpscan/default.nix @@ -1,11 +1,18 @@ -{ bundlerApp, lib, makeWrapper, curl }: +{ lib +, bundlerApp +, makeWrapper +, curl +}: bundlerApp { pname = "wpscan"; gemdir = ./.; exes = [ "wpscan" ]; - buildInputs = [ makeWrapper ]; + buildInputs = [ + makeWrapper + ]; + postBuild = '' wrapProgram "$out/bin/wpscan" \ --prefix PATH : ${lib.makeBinPath [ curl ]} diff --git a/pkgs/tools/security/wpscan/gemset.nix b/pkgs/tools/security/wpscan/gemset.nix index 80b5ec290c0..d62c17bc94d 100644 --- a/pkgs/tools/security/wpscan/gemset.nix +++ b/pkgs/tools/security/wpscan/gemset.nix @@ -5,10 +5,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0kqgywy4cj3h5142dh7pl0xx5nybp25jn0ykk0znziivzks68xdk"; + sha256 = "19gx1jcq46x9d1pi1w8xq0bgvvfw239y4lalr8asm291gj3q3ds4"; type = "gem"; }; - version = "6.1.4"; + version = "6.1.4.1"; }; addressable = { dependencies = ["public_suffix"]; @@ -16,10 +16,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1fvchp2rhp2rmigx7qglf69xvjqvzq7x0g49naliw29r2bz656sy"; + sha256 = "022r3m9wdxljpbya69y2i3h9g3dhhfaqzidf95m6qjzms792jvgp"; type = "gem"; }; - version = "2.7.0"; + version = "2.8.0"; }; cms_scanner = { dependencies = ["ethon" "get_process_mem" "nokogiri" "opt_parse_validator" "public_suffix" "ruby-progressbar" "sys-proctable" "typhoeus" "xmlrpc" "yajl-ruby"]; @@ -27,10 +27,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "15qh28drxkyv294l1qcpsghfa875p71q0vkmmv5l6fbmpapmllrk"; + sha256 = "1kpp3598xs79irb9g2wkcxjwlszj37sb7lp3xmvf6s5s40p0ccwf"; type = "gem"; }; - version = "0.13.5"; + version = "0.13.6"; }; concurrent-ruby = { groups = ["default"]; @@ -58,10 +58,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1wgvaclp4h9y8zkrgz8p2hqkrgr4j7kz0366mik0970w532cbmcq"; + sha256 = "0ssxcywmb3flxsjdg13is6k01807zgzasdhj4j48dm7ac59cmksn"; type = "gem"; }; - version = "1.15.3"; + version = "1.15.4"; }; get_process_mem = { dependencies = ["ffi"]; @@ -85,25 +85,25 @@ }; version = "1.8.10"; }; - mini_portile2 = { + minitest = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1ad0mli9rc0f17zw4ibp24dbj1y39zkykijsjmnzl4gwpg5s0j6k"; + sha256 = "19z7wkhg59y8abginfrm2wzplz7py3va8fyngiigngqvsws6cwgl"; type = "gem"; }; - version = "2.5.3"; + version = "5.14.4"; }; - minitest = { + mini_portile2 = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "19z7wkhg59y8abginfrm2wzplz7py3va8fyngiigngqvsws6cwgl"; + sha256 = "1lvxm91hi0pabnkkg47wh1siv56s6slm2mdq1idfm86dyfidfprq"; type = "gem"; }; - version = "5.14.4"; + version = "2.6.1"; }; nokogiri = { dependencies = ["mini_portile2" "racc"]; @@ -111,10 +111,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1vrn31385ix5k9b0yalnlzv360isv6dincbcvi8psllnwz4sjxj9"; + sha256 = "1sad16idsxayhaaswc3bksii1ydiqyzikl7y0ng35cn7w4g1dv3z"; type = "gem"; }; - version = "1.11.7"; + version = "1.12.4"; }; opt_parse_validator = { dependencies = ["activesupport" "addressable"]; @@ -122,10 +122,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1n297vrxq7r1fsh0x8yf1nhgdawmcl0sq04l468gwrd4y754rjyx"; + sha256 = "1jzmn3h9sr7bhjj1fdfvh4yzvqx7d3vsbwbqrf718dh427ifqs9c"; type = "gem"; }; - version = "1.9.4"; + version = "1.9.5"; }; public_suffix = { groups = ["default"]; @@ -206,10 +206,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "01ig3fbxxm0gnvqkzmsc4zcipijprrw5xs84rnwp50w0crww842c"; + sha256 = "0gv5ym8sxr9901z55d0dakc7af954rp2asnd1a68arjvfyj96sq3"; type = "gem"; }; - version = "3.8.18"; + version = "3.8.19"; }; xmlrpc = { dependencies = ["webrick"]; diff --git a/pkgs/tools/system/btop/default.nix b/pkgs/tools/system/btop/default.nix index 5425b6e5f5b..2884e509b43 100644 --- a/pkgs/tools/system/btop/default.nix +++ b/pkgs/tools/system/btop/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { pname = "btop"; - version = "1.0.5"; + version = "1.0.10"; src = fetchFromGitHub { owner = "aristocratos"; repo = pname; rev = "v${version}"; - sha256 = "sha256-pa9i65ndx8LMTMRXyL2GXCauM6Q8gAb16zGOylQFwL0="; + sha256 = "14d41q9hfwmzhxqrnrz17rgbi03j0xga2jmw8n9y2v21rqxg73y0"; }; installFlags = [ "PREFIX=$(out)" ]; diff --git a/pkgs/tools/system/foreman/Gemfile.lock b/pkgs/tools/system/foreman/Gemfile.lock index 1bafc658cbc..dac60786a63 100644 --- a/pkgs/tools/system/foreman/Gemfile.lock +++ b/pkgs/tools/system/foreman/Gemfile.lock @@ -4,6 +4,10 @@ GEM foreman (0.87.2) PLATFORMS + aarch64-darwin + aarch64-linux + ruby + x86_64-darwin x86_64-linux DEPENDENCIES diff --git a/pkgs/tools/system/s6-rc/default.nix b/pkgs/tools/system/s6-rc/default.nix index 31b9c14257a..9404dd26a97 100644 --- a/pkgs/tools/system/s6-rc/default.nix +++ b/pkgs/tools/system/s6-rc/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6-rc"; - version = "0.5.2.2"; - sha256 = "12bzc483jpd16xmhfsfrib84daj1k3kwy5s5nc18ap60apa1r39a"; + version = "0.5.2.3"; + sha256 = "1f92dxw1n8r8avamixi9k0gqbnkpm0r3fmwzz7jd82g6bb2vsg5z"; description = "A service manager for s6-based systems"; platforms = lib.platforms.unix; diff --git a/pkgs/tools/system/s6/default.nix b/pkgs/tools/system/s6/default.nix index e9d096a7ab0..dc64afa6246 100644 --- a/pkgs/tools/system/s6/default.nix +++ b/pkgs/tools/system/s6/default.nix @@ -4,8 +4,8 @@ with skawarePackages; buildPackage { pname = "s6"; - version = "2.10.0.3"; - sha256 = "0mw7blp8dwr09z58m9mrxwmmvvpnjzq9klcf1vgm0hbha4qkf88x"; + version = "2.11.0.0"; + sha256 = "1a3lj0xfhn1w3a4ygqsxy8q4dr3n48hnwml4xzdpz3nrikhy8if5"; description = "skarnet.org's small & secure supervision software suite"; @@ -34,6 +34,7 @@ buildPackage { # remove all s6 executables from build directory rm $(find -type f -mindepth 1 -maxdepth 1 -executable) rm libs6.* + rm ./libs6lockd.a.xyzzy mv doc $doc/share/doc/s6/html mv examples $doc/share/doc/s6/examples diff --git a/pkgs/tools/system/stress-ng/default.nix b/pkgs/tools/system/stress-ng/default.nix index 6d748749a0c..46a1fdfd8d3 100644 --- a/pkgs/tools/system/stress-ng/default.nix +++ b/pkgs/tools/system/stress-ng/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "stress-ng"; - version = "0.13.01"; + version = "0.13.03"; src = fetchurl { url = "https://kernel.ubuntu.com/~cking/tarballs/${pname}/${pname}-${version}.tar.xz"; - sha256 = "sha256-839znk0VNDNgpHmAtn3Isqa/PU0+9yfVXi3Zmgtk+eo="; + sha256 = "sha256-PmDWBeN42GqFkaMNblV77XCdgqWxlhY3gALNj/ADeos="; }; postPatch = '' diff --git a/pkgs/tools/text/hck/default.nix b/pkgs/tools/text/hck/default.nix index c17488bf67a..00ab04a56c6 100644 --- a/pkgs/tools/text/hck/default.nix +++ b/pkgs/tools/text/hck/default.nix @@ -10,16 +10,16 @@ rustPlatform.buildRustPackage rec { pname = "hck"; - version = "0.6.5"; + version = "0.6.6"; src = fetchFromGitHub { owner = "sstadick"; repo = pname; rev = "v${version}"; - sha256 = "sha256-+gBxZCBJmwe92DhfVorkfXsjpjkgm7JO/p/SHta9ly8="; + sha256 = "sha256-DUFJZEtJM5Sv41zJvSZ8KsNWFzlictM2T1wS7VxPL04="; }; - cargoSha256 = "sha256-lAKMaUrXjplh5YhMZuLhTNDQBzDPHCfFrELHicwgi6U="; + cargoSha256 = "sha256-kubQL+p7J2koPDOje5wMxKDeCY4yi0kupfHsJCKYf44="; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/tools/text/wgetpaste/default.nix b/pkgs/tools/text/wgetpaste/default.nix index a3a7a8bd54a..ce757401b36 100644 --- a/pkgs/tools/text/wgetpaste/default.nix +++ b/pkgs/tools/text/wgetpaste/default.nix @@ -1,12 +1,12 @@ { lib, stdenv, fetchurl, wget, bash }: stdenv.mkDerivation rec { - version = "2.30"; pname = "wgetpaste"; + version = "2.32"; src = fetchurl { - url = "http://wgetpaste.zlin.dk/${pname}-${version}.tar.bz2"; - sha256 = "14k5i6j6f34hcf9gdb9cnvfwscn0ys2dgd73ci421wj9zzqkbv73"; + url = "https://github.com/zlin/wgetpaste/releases/download/${version}/wgetpaste-${version}.tar.xz"; + sha256 = "04yv1hndxhrc5axwiw1yy0yrw1kli5fk4yj4267l7xdwqzxvl7b2"; }; # currently zsh-autocompletion support is not installed @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { meta = { description = "Command-line interface to various pastebins"; - homepage = "http://wgetpaste.zlin.dk/"; + homepage = "https://github.com/zlin/wgetpaste"; license = lib.licenses.publicDomain; maintainers = with lib.maintainers; [ qknight domenkozar ]; platforms = lib.platforms.all; diff --git a/pkgs/tools/wayland/swayr/default.nix b/pkgs/tools/wayland/swayr/default.nix index bb20222a9be..195c0b1bf38 100644 --- a/pkgs/tools/wayland/swayr/default.nix +++ b/pkgs/tools/wayland/swayr/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { pname = "swayr"; - version = "0.6.2"; + version = "0.7.0"; src = fetchFromSourcehut { owner = "~tsdh"; repo = "swayr"; rev = "v${version}"; - sha256 = "sha256-ZnZ9g8o1+VfhpDqxqtknNJ7dcyt5yuQcH3txxA3HICU="; + sha256 = "sha256-B19cHdoiCbxhvRGi3NzKPKneKgOI4+l8+Qg9/YVgUV8="; }; - cargoSha256 = "sha256-0EhHFxbQi3Jgu13pXIjYYFYDEOQjwN5h+jE+22gJG0s="; + cargoSha256 = "sha256-iO64K+d/wEyY/tVztIG8zYSha5X0iTHV7IDVthMJQGA="; patches = [ ./icon-paths.patch diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index ad615a67b8c..c81ee814bc7 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -50,10 +50,12 @@ mapAliases ({ alsaTools = alsa-tools; # added 2021-06-10 alsaUtils = alsa-utils; # added 2021-06-10 amazon-glacier-cmd-interface = throw "amazon-glacier-cmd-interface has been removed due to it being unmaintained."; # added 2020-10-30 + aminal = throw "aminal was renamed to darktile."; # added 2021-09-28 ammonite-repl = ammonite; # added 2017-05-02 amsn = throw "amsn has been removed due to being unmaintained."; # added 2020-12-09 antimicro = throw "antimicro has been removed as it was broken, see antimicroX instead."; # added 2020-08-06 arduino_core = arduino-core; # added 2015-02-04 + ardour_5 = throw "ardour_5 has been removed. see https://github.com/NixOS/nixpkgs/issues/139549"; # added 2021-09-28 arora = throw "arora has been removed."; # added 2020-09-09 asciidocFull = asciidoc-full; # added 2014-06-22 asterisk_15 = throw "asterisk_15: Asterisk 15 is end of life and has been removed."; # added 2020-10-07 @@ -464,7 +466,6 @@ mapAliases ({ linuxPackages_4_19 = linuxKernel.packages.linux_4_19; linuxPackages_5_4 = linuxKernel.packages.linux_5_4; linuxPackages_5_10 = linuxKernel.packages.linux_5_10; - linuxPackages_5_13 = linuxKernel.packages.linux_5_13; linuxPackages_5_14 = linuxKernel.packages.linux_5_14; linux_mptcp_95 = linuxKernel.kernels.linux_mptcp_95; @@ -481,7 +482,6 @@ mapAliases ({ linux_5_10 = linuxKernel.kernels.linux_5_10; linux-rt_5_10 = linuxKernel.kernels.linux_rt_5_10; linux-rt_5_11 = linuxKernel.kernels.linux_rt_5_11; - linux_5_13 = linuxKernel.kernels.linux_5_13; linux_5_14 = linuxKernel.kernels.linux_5_14; # added 2020-04-04 @@ -944,6 +944,7 @@ mapAliases ({ transmission_remote_gtk = transmission-remote-gtk; # added 2018-01-06 transmission-remote-cli = "transmission-remote-cli has been removed, as the upstream project has been abandoned. Please use tremc instead"; # added 2020-10-14 transporter = throw "transporter has been removed. It was archived upstream, so it's considered abandoned."; + trebleshot = throw "trebleshot has been removed. It was archived upstream, so it's considered abandoned."; trilium = throw "trilium has been removed. Please use trilium-desktop instead."; # added 2020-04-29 truecrypt = veracrypt; # added 2018-10-24 tshark = wireshark-cli; # added 2018-04-25 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 9933bfc4af4..f3934e52b50 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -510,7 +510,10 @@ with pkgs; fetchhg = callPackage ../build-support/fetchhg { }; - fetchFirefoxAddon = callPackage ../build-support/fetchfirefoxaddon {}; + fetchFirefoxAddon = callPackage ../build-support/fetchfirefoxaddon { } + // { + tests = callPackages ../build-support/fetchfirefoxaddon/tests.nix { }; + }; # `fetchurl' downloads a file from the network. fetchurl = if stdenv.buildPlatform != stdenv.hostPlatform @@ -615,7 +618,15 @@ with pkgs; drvPath = (f args).drvPath; # It's safe to discard the context, because we don't access the path. salt = builtins.unsafeDiscardStringContext (lib.substring 0 12 (baseNameOf drvPath)); - in f (args // { name = "${args.name or "source"}-salted-${salt}"; }); + # New derivation incorporating the original drv hash in the name + salted = f (args // { name = "${args.name or "source"}-salted-${salt}"; }); + # Make sure we did change the derivation. If the fetcher ignores `name`, + # `invalidateFetcherByDrvHash` doesn't work. + checked = + if salted.drvPath == drvPath + then throw "invalidateFetcherByDrvHash: Adding the derivation hash to the fixed-output derivation name had no effect. Make sure the fetcher's name argument ends up in the derivation name. Otherwise, the fetcher will not be re-run when its implementation changes. This is important for testing." + else salted; + in checked; lazydocker = callPackage ../tools/misc/lazydocker { }; @@ -967,10 +978,6 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) AppKit CoreGraphics CoreServices CoreText Foundation OpenGL; }; - aminal = callPackage ../applications/terminal-emulators/aminal { - inherit (darwin.apple_sdk.frameworks) Carbon Cocoa Kernel; - }; - archi = callPackage ../tools/misc/archi { }; contour = libsForQt5.callPackage ../applications/terminal-emulators/contour { }; @@ -1326,6 +1333,8 @@ with pkgs; bitwise = callPackage ../tools/misc/bitwise { }; + blanket = callPackage ../applications/audio/blanket { }; + brakeman = callPackage ../development/tools/analysis/brakeman { }; brewtarget = libsForQt514.callPackage ../applications/misc/brewtarget { } ; @@ -2058,7 +2067,6 @@ with pkgs; libtensorflow-bin = callPackage ../development/libraries/science/math/tensorflow/bin.nix { cudaSupport = config.cudaSupport or false; - inherit (linuxPackages) nvidia_x11; cudatoolkit = cudatoolkit_10_0; cudnn = cudnn_cudatoolkit_10_0; }; @@ -3414,6 +3422,8 @@ with pkgs; swego = callPackage ../servers/swego { }; + sydbox = callPackage ../os-specific/linux/sydbox { }; + syscall_limiter = callPackage ../os-specific/linux/syscall_limiter {}; syslogng = callPackage ../tools/system/syslog-ng { }; @@ -4200,6 +4210,8 @@ with pkgs; cwebbin = callPackage ../development/tools/misc/cwebbin { }; + cve-bin-tool = python3Packages.callPackage ../tools/security/cve-bin-tool { }; + cvs-fast-export = callPackage ../applications/version-management/cvs-fast-export { }; dadadodo = callPackage ../tools/text/dadadodo { }; @@ -6229,6 +6241,8 @@ with pkgs; iodine = callPackage ../tools/networking/iodine { }; + ioccheck = callPackage ../tools/security/ioccheck { }; + ioping = callPackage ../tools/system/ioping { }; iops = callPackage ../tools/system/iops { }; @@ -7966,6 +7980,8 @@ with pkgs; operator-sdk = callPackage ../development/tools/operator-sdk { }; + owncast = callPackage ../servers/owncast { }; + update-dotdee = with python3Packages; toPythonApplication update-dotdee; update-nix-fetchgit = haskell.lib.justStaticExecutables haskellPackages.update-nix-fetchgit; @@ -8862,6 +8878,10 @@ with pkgs; rust-petname = callPackage ../tools/text/rust-petname { }; + rustcat = callPackage ../tools/networking/rustcat { + inherit (darwin.apple_sdk.frameworks) Security; + }; + rustscan = callPackage ../tools/security/rustscan { inherit (darwin.apple_sdk.frameworks) Security; }; @@ -9052,6 +9072,8 @@ with pkgs; schema2ldif = callPackage ../tools/text/schema2ldif { }; + sharedown = callPackage ../tools/misc/sharedown { }; + shen-sbcl = callPackage ../development/interpreters/shen-sbcl { }; shen-sources = callPackage ../development/interpreters/shen-sources { }; @@ -9782,8 +9804,6 @@ with pkgs; trash-cli = callPackage ../tools/misc/trash-cli { }; - trebleshot = libsForQt5.callPackage ../applications/networking/trebleshot { }; - trenchbroom = libsForQt5.callPackage ../applications/misc/trenchbroom { inherit (xorg) libXxf86vm; }; @@ -11115,9 +11135,6 @@ with pkgs; inherit (callPackages ../development/compilers/crystal { llvmPackages = llvmPackages_10; }) - crystal_0_33 - crystal_0_34 - crystal_0_35 crystal_0_36 crystal_1_0 crystal; @@ -12539,6 +12556,7 @@ with pkgs; rhack = callPackage ../development/tools/rust/rhack { }; inherit (rustPackages) rls; + roogle = callPackage ../development/tools/rust/roogle { }; rustfmt = rustPackages.rustfmt; rustracer = callPackage ../development/tools/rust/racer { inherit (darwin.apple_sdk.frameworks) Security; @@ -14718,8 +14736,7 @@ with pkgs; shallot = callPackage ../tools/misc/shallot { }; inherit (callPackage ../development/tools/build-managers/shards { }) - shards_0_11 - shards_0_14 + shards_0_15 shards; shellcheck = callPackage ../development/tools/shellcheck {}; @@ -14873,6 +14890,7 @@ with pkgs; texinfo5 = callPackage ../development/tools/misc/texinfo/5.2.nix { }; texinfo6_5 = callPackage ../development/tools/misc/texinfo/6.5.nix { }; # needed for allegro texinfo6 = callPackage ../development/tools/misc/texinfo/6.7.nix { }; + texinfo6_8 = callPackage ../development/tools/misc/texinfo/6.8.nix { }; texinfo = texinfo6; texinfoInteractive = appendToName "interactive" ( texinfo.override { interactive = true; } @@ -18543,6 +18561,8 @@ with pkgs; proj = callPackage ../development/libraries/proj { }; + proj_7 = callPackage ../development/libraries/proj/7.nix { }; + proj-datumgrid = callPackage ../development/libraries/proj-datumgrid { }; proselint = callPackage ../tools/text/proselint { @@ -18942,6 +18962,7 @@ with pkgs; skaffold = callPackage ../development/tools/skaffold { }; skalibs = skawarePackages.skalibs; + skalibs_2_10 = skawarePackages.skalibs_2_10; skawarePackages = recurseIntoAttrs rec { cleanPackaging = callPackage ../build-support/skaware/clean-packaging.nix { }; @@ -18951,6 +18972,7 @@ with pkgs; buildManPages = callPackage ../build-support/skaware/build-skaware-man-pages.nix { }; skalibs = callPackage ../development/libraries/skalibs { }; + skalibs_2_10 = callPackage ../development/libraries/skalibs/2_10.nix { }; execline = callPackage ../tools/misc/execline { }; execline-man-pages = callPackage ../data/documentation/execline-man-pages { @@ -20442,6 +20464,11 @@ with pkgs; petidomo = callPackage ../servers/mail/petidomo { }; + pict-rs = callPackage ../servers/web-apps/pict-rs { + inherit (darwin.apple_sdk.frameworks) Security; + ffmpeg = ffmpeg_4; + }; + popa3d = callPackage ../servers/mail/popa3d { }; postfix = callPackage ../servers/mail/postfix { }; @@ -20727,6 +20754,7 @@ with pkgs; prometheus-dnsmasq-exporter = callPackage ../servers/monitoring/prometheus/dnsmasq-exporter.nix { }; prometheus-dovecot-exporter = callPackage ../servers/monitoring/prometheus/dovecot-exporter.nix { }; prometheus-domain-exporter = callPackage ../servers/monitoring/prometheus/domain-exporter.nix { }; + prometheus-fastly-exporter = callPackage ../servers/monitoring/prometheus/fastly-exporter.nix { }; prometheus-flow-exporter = callPackage ../servers/monitoring/prometheus/flow-exporter.nix { }; prometheus-fritzbox-exporter = callPackage ../servers/monitoring/prometheus/fritzbox-exporter.nix { }; prometheus-gitlab-ci-pipelines-exporter = callPackage ../servers/monitoring/prometheus/gitlab-ci-pipelines-exporter.nix { }; @@ -21543,8 +21571,6 @@ with pkgs; linux_5_4_hardened = linuxKernel.kernels.linux_5_4_hardened; linuxPackages_5_10_hardened = linuxKernel.packages.linux_5_10_hardened; linux_5_10_hardened = linuxKernel.kernels.linux_5_10_hardened; - linuxPackages_5_13_hardened = linuxKernel.packages.linux_5_13_hardened; - linux_5_13_hardened = linuxKernel.kernels.linux_5_13_hardened; linuxPackages_5_14_hardened = linuxKernel.packages.linux_5_14_hardened; linux_5_14_hardened = linuxKernel.kernels.linux_5_14_hardened; @@ -23290,8 +23316,6 @@ with pkgs; ardour = callPackage ../applications/audio/ardour { }; - ardour_5 = lowPrio (callPackage ../applications/audio/ardour/5.nix { }); - arelle = with python3Packages; toPythonApplication arelle; argo = callPackage ../applications/networking/cluster/argo { }; @@ -26532,6 +26556,8 @@ with pkgs; octoprint = callPackage ../applications/misc/octoprint { }; + ocr-a = callPackage ../data/fonts/ocr-a {}; + ocrad = callPackage ../applications/graphics/ocrad { }; offrss = callPackage ../applications/networking/offrss { }; @@ -26933,6 +26959,7 @@ with pkgs; qemu = callPackage ../applications/virtualization/qemu { inherit (darwin.apple_sdk.frameworks) CoreServices Cocoa Hypervisor; inherit (darwin.stubs) rez setfile; + inherit (darwin) sigtool; python = python3; }; @@ -26950,7 +26977,14 @@ with pkgs; qimgv = libsForQt5.callPackage ../applications/graphics/qimgv { }; - qlandkartegt = libsForQt514.callPackage ../applications/misc/qlandkartegt {}; + qlandkartegt = libsForQt514.callPackage ../applications/misc/qlandkartegt { + gdal = gdal.override { + libgeotiff = libgeotiff.override { proj = proj_7; }; + libspatialite = libspatialite.override { proj = proj_7; }; + proj = proj_7; + }; + proj = proj_7; + }; garmindev = callPackage ../applications/misc/qlandkartegt/garmindev.nix {}; @@ -31114,10 +31148,7 @@ with pkgs; gildas = callPackage ../applications/science/astronomy/gildas { }; - gplates = callPackage ../applications/science/misc/gplates { - boost = boost160; - cgal = cgal.override { boost = boost160; }; - }; + gplates = libsForQt5.callPackage ../applications/science/misc/gplates { }; gravit = callPackage ../applications/science/astronomy/gravit { }; @@ -31359,7 +31390,7 @@ with pkgs; depotdownloader = callPackage ../tools/misc/depotdownloader { }; - desmume = callPackage ../misc/emulators/desmume { inherit (gnome2) gtkglext libglade; }; + desmume = callPackage ../misc/emulators/desmume { }; dbacl = callPackage ../tools/misc/dbacl { }; @@ -31472,6 +31503,8 @@ with pkgs; binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; }; + go365 = callPackage ../tools/security/go365 { }; + gobuster = callPackage ../tools/security/gobuster { }; gotestwaf = callPackage ../tools/security/gotestwaf { }; @@ -32316,6 +32349,8 @@ with pkgs; vice = callPackage ../misc/emulators/vice { }; + viddy = callPackage ../tools/misc/viddy { }; + ViennaRNA = callPackage ../applications/science/molecular-dynamics/viennarna { }; viewnior = callPackage ../applications/graphics/viewnior { }; diff --git a/pkgs/top-level/linux-kernels.nix b/pkgs/top-level/linux-kernels.nix index 82ad3ed0ff0..d1afd342280 100644 --- a/pkgs/top-level/linux-kernels.nix +++ b/pkgs/top-level/linux-kernels.nix @@ -155,13 +155,6 @@ in { ]; }; - linux_5_13 = callPackage ../os-specific/linux/kernel/linux-5.13.nix { - kernelPatches = [ - kernelPatches.bridge_stp_helper - kernelPatches.request_key_helper - ]; - }; - linux_5_14 = callPackage ../os-specific/linux/kernel/linux-5.14.nix { kernelPatches = [ kernelPatches.bridge_stp_helper @@ -177,7 +170,7 @@ in { }; linux_testing_bcachefs = callPackage ../os-specific/linux/kernel/linux-testing-bcachefs.nix rec { - kernel = linux_5_13; + kernel = linux_5_14; kernelPatches = kernel.kernelPatches; }; @@ -220,7 +213,6 @@ in { linux_4_19_hardened = hardenedKernelFor kernels.linux_4_19 { }; linux_5_4_hardened = hardenedKernelFor kernels.linux_5_4 { }; linux_5_10_hardened = hardenedKernelFor kernels.linux_5_10 { }; - linux_5_13_hardened = hardenedKernelFor kernels.linux_5_13 { }; linux_5_14_hardened = hardenedKernelFor kernels.linux_5_14 { }; })); @@ -458,7 +450,6 @@ in { linux_4_19 = recurseIntoAttrs (packagesFor kernels.linux_4_19); linux_5_4 = recurseIntoAttrs (packagesFor kernels.linux_5_4); linux_5_10 = recurseIntoAttrs (packagesFor kernels.linux_5_10); - linux_5_13 = recurseIntoAttrs (packagesFor kernels.linux_5_13); linux_5_14 = recurseIntoAttrs (packagesFor kernels.linux_5_14); }; @@ -489,7 +480,6 @@ in { linux_4_19_hardened = recurseIntoAttrs (hardenedPackagesFor kernels.linux_4_19 { }); linux_5_4_hardened = recurseIntoAttrs (hardenedPackagesFor kernels.linux_5_4 { }); linux_5_10_hardened = recurseIntoAttrs (hardenedPackagesFor kernels.linux_5_10 { }); - linux_5_13_hardened = recurseIntoAttrs (hardenedPackagesFor kernels.linux_5_13 { }); linux_5_14_hardened = recurseIntoAttrs (hardenedPackagesFor kernels.linux_5_14 { }); linux_zen = recurseIntoAttrs (packagesFor kernels.linux_zen); diff --git a/pkgs/top-level/lua-packages.nix b/pkgs/top-level/lua-packages.nix index 80f71dc1942..3d8272633f1 100644 --- a/pkgs/top-level/lua-packages.nix +++ b/pkgs/top-level/lua-packages.nix @@ -12,18 +12,12 @@ , fetchFromGitHub, which, writeText , pkgs , lib -}: +}@args: let packages = ( self: let - - # a function of lua_path / lua_cpath - lua-setup-hook = callPackage ../development/interpreters/lua-5/setup-hook.nix { - inherit lib; - }; - callPackage = pkgs.newScope self; buildLuaApplication = args: buildLuarocksPackage ({namePrefix="";} // args ); @@ -52,11 +46,13 @@ in # helper functions for dealing with LUA_PATH and LUA_CPATH lib = luaLib; - getLuaPath = drv: luaLib.getPath drv (luaLib.luaPathList lua.luaversion) ; - getLuaCPath = drv: luaLib.getPath drv (luaLib.luaCPathList lua.luaversion) ; + getLuaPath = drv: getPath drv (luaLib.luaPathList lua.luaversion) ; + getLuaCPath = drv: getPath drv (luaLib.luaCPathList lua.luaversion) ; + inherit (callPackage ../development/interpreters/lua-5/hooks { inherit (args) lib;}) + lua-setup-hook; - inherit lua lua-setup-hook callPackage; + inherit lua callPackage; inherit buildLuaPackage buildLuarocksPackage buildLuaApplication; inherit (luaLib) luaOlder luaAtLeast isLua51 isLua52 isLua53 isLuaJIT requiredLuaModules toLuaModule hasLuaModule; diff --git a/pkgs/top-level/metrics.nix b/pkgs/top-level/metrics.nix index 590a24fb2b0..c045439da1a 100644 --- a/pkgs/top-level/metrics.nix +++ b/pkgs/top-level/metrics.nix @@ -9,6 +9,7 @@ runCommand "nixpkgs-metrics" } '' export NIX_STATE_DIR=$TMPDIR + export NIX_PAGER= nix-store --init mkdir -p $out/nix-support @@ -24,13 +25,11 @@ runCommand "nixpkgs-metrics" # Redirect stdout to /dev/null to avoid hitting "Output Limit # Exceeded" on Hydra. nix-env.qaDrv|nix-env.qaDrvAggressive) - NIX_SHOW_STATS=1 time -o stats-time "$@" 2>stats-nix >/dev/null ;; + NIX_SHOW_STATS=1 NIX_SHOW_STATS_PATH=stats-nix time -o stats-time "$@" >/dev/null ;; *) - NIX_SHOW_STATS=1 time -o stats-time "$@" 2>stats-nix ;; + NIX_SHOW_STATS=1 NIX_SHOW_STATS_PATH=stats-nix time -o stats-time "$@" ;; esac - sed '/^warning:/d' -i stats-nix - cat stats-nix; echo; cat stats-time; echo x=$(jq '.cpuTime' < stats-nix) diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index f2f9c912ffc..1afd58ad6f8 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -611,6 +611,10 @@ let letsencrypt = callPackage ../development/ocaml-modules/letsencrypt { }; + letsencrypt-app = callPackage ../development/ocaml-modules/letsencrypt/app.nix { }; + + letsencrypt-dns = callPackage ../development/ocaml-modules/letsencrypt/dns.nix { }; + linenoise = callPackage ../development/ocaml-modules/linenoise { }; llvm = callPackage ../development/ocaml-modules/llvm { @@ -990,6 +994,10 @@ let paf = callPackage ../development/ocaml-modules/paf { }; + paf-cohttp = callPackage ../development/ocaml-modules/paf/cohttp.nix { }; + + paf-le = callPackage ../development/ocaml-modules/paf/le.nix { }; + parse-argv = callPackage ../development/ocaml-modules/parse-argv { }; path_glob = callPackage ../development/ocaml-modules/path_glob { }; @@ -1601,7 +1609,7 @@ in let inherit (pkgs) callPackage; in rec ocamlPackages_4_13 = mkOcamlPackages (callPackage ../development/compilers/ocaml/4.13.nix { }); - ocamlPackages_latest = ocamlPackages_4_12; + ocamlPackages_latest = ocamlPackages_4_13; ocamlPackages = ocamlPackages_4_12; } diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 1d95c5ff541..d5ad5cfc9eb 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -351,6 +351,8 @@ in { aiopulse = callPackage ../development/python-modules/aiopulse { }; + aiopvapi = callPackage ../development/python-modules/aiopvapi { }; + aiopvpc = callPackage ../development/python-modules/aiopvpc { }; aiopylgtv = callPackage ../development/python-modules/aiopylgtv { }; @@ -387,6 +389,8 @@ in { aiounittest = callPackage ../development/python-modules/aiounittest { }; + aiowatttime = callPackage ../development/python-modules/aiowatttime { }; + aiowinreg = callPackage ../development/python-modules/aiowinreg { }; aioymaps = callPackage ../development/python-modules/aioymaps { }; @@ -615,6 +619,8 @@ in { async-lru = callPackage ../development/python-modules/async-lru { }; + asynccmd = callPackage ../development/python-modules/asynccmd { }; + asyncio-dgram = callPackage ../development/python-modules/asyncio-dgram { }; asyncio-mqtt = callPackage ../development/python-modules/asyncio_mqtt { }; @@ -1776,8 +1782,6 @@ in { curve25519-donna = callPackage ../development/python-modules/curve25519-donna { }; - cve-bin-tool = callPackage ../development/python-modules/cve-bin-tool { }; - cvxopt = callPackage ../development/python-modules/cvxopt { }; cvxpy = callPackage ../development/python-modules/cvxpy { }; @@ -2322,6 +2326,8 @@ in { elgato = callPackage ../development/python-modules/elgato { }; + elkm1-lib = callPackage ../development/python-modules/elkm1-lib { }; + elasticsearch = callPackage ../development/python-modules/elasticsearch { }; elasticsearch-dsl = callPackage ../development/python-modules/elasticsearch-dsl { }; @@ -2412,6 +2418,8 @@ in { etebase-server = callPackage ../servers/etebase { }; + eternalegypt = callPackage ../development/python-modules/eternalegypt { }; + etesync = callPackage ../development/python-modules/etesync { }; eth-hash = callPackage ../development/python-modules/eth-hash { }; @@ -2731,6 +2739,8 @@ in { flickrapi = callPackage ../development/python-modules/flickrapi { }; + flipr-api = callPackage ../development/python-modules/flipr-api { }; + flit = callPackage ../development/python-modules/flit { }; flit-core = callPackage ../development/python-modules/flit-core { }; @@ -3678,6 +3688,8 @@ in { iocapture = callPackage ../development/python-modules/iocapture { }; + iotawattpy = callPackage ../development/python-modules/iotawattpy { }; + iowait = callPackage ../development/python-modules/iowait { }; ipaddress = callPackage ../development/python-modules/ipaddress { }; @@ -4372,6 +4384,8 @@ in { lupa = callPackage ../development/python-modules/lupa { }; + lupupy = callPackage ../development/python-modules/lupupy { }; + lxml = callPackage ../development/python-modules/lxml { inherit (pkgs) libxml2 libxslt zlib; }; @@ -4466,6 +4480,8 @@ in { marshmallow = callPackage ../development/python-modules/marshmallow { }; + marshmallow-dataclass = callPackage ../development/python-modules/marshmallow-dataclass { }; + marshmallow-enum = callPackage ../development/python-modules/marshmallow-enum { }; marshmallow-oneofschema = callPackage ../development/python-modules/marshmallow-oneofschema { }; @@ -4925,6 +4941,8 @@ in { nilearn = callPackage ../development/python-modules/nilearn { }; + niluclient = callPackage ../development/python-modules/niluclient { }; + nimfa = callPackage ../development/python-modules/nimfa { }; nine = callPackage ../development/python-modules/nine { }; @@ -5239,6 +5257,8 @@ in { oyaml = callPackage ../development/python-modules/oyaml { }; + p1monitor = callPackage ../development/python-modules/p1monitor { }; + packageurl-python = callPackage ../development/python-modules/packageurl-python { }; packaging = callPackage ../development/python-modules/packaging { }; @@ -5541,6 +5561,8 @@ in { pyfireservicerota = callPackage ../development/python-modules/pyfireservicerota { }; + pyflexit = callPackage ../development/python-modules/pyflexit { }; + pyflick = callPackage ../development/python-modules/pyflick { }; pyfreedompro = callPackage ../development/python-modules/pyfreedompro { }; @@ -5567,6 +5589,8 @@ in { pypoint = callPackage ../development/python-modules/pypoint { }; + pypoolstation = callPackage ../development/python-modules/pypoolstation { }; + pyrfxtrx = callPackage ../development/python-modules/pyrfxtrx { }; pyrogram = callPackage ../development/python-modules/pyrogram { }; @@ -5607,6 +5631,8 @@ in { python-openzwave-mqtt = callPackage ../development/python-modules/python-openzwave-mqtt { }; + python-owasp-zap-v2-4 = callPackage ../development/python-modules/python-owasp-zap-v2-4 { }; + python-songpal = callPackage ../development/python-modules/python-songpal { }; python-swiftclient = callPackage ../development/python-modules/python-swiftclient { }; @@ -6118,6 +6144,8 @@ in { pydocumentdb = callPackage ../development/python-modules/pydocumentdb { }; + pydoods = callPackage ../development/python-modules/pydoods { }; + pydot = callPackage ../development/python-modules/pydot { inherit (pkgs) graphviz; }; @@ -6530,6 +6558,8 @@ in { inherit (pkgs) coreutils which; }; + pynello = callPackage ../development/python-modules/pynello { }; + pynest2d = callPackage ../development/python-modules/pynest2d { }; pynetbox = callPackage ../development/python-modules/pynetbox { }; @@ -6560,6 +6590,8 @@ in { pyogg = callPackage ../development/python-modules/pyogg { }; + pyombi = callPackage ../development/python-modules/pyombi { }; + pyomo = callPackage ../development/python-modules/pyomo { }; pyp = callPackage ../development/python-modules/pyp { @@ -6807,6 +6839,8 @@ in { pyscss = callPackage ../development/python-modules/pyscss { }; + pysdcp = callPackage ../development/python-modules/pysdcp { }; + pysdl2 = callPackage ../development/python-modules/pysdl2 { }; pysendfile = callPackage ../development/python-modules/pysendfile { }; @@ -6893,6 +6927,8 @@ in { pysparse = callPackage ../development/python-modules/pysparse { }; + pyspcwebgw = callPackage ../development/python-modules/pyspcwebgw { }; + pyspf = callPackage ../development/python-modules/pyspf { }; pyspice = callPackage ../development/python-modules/pyspice { }; @@ -7801,6 +7837,8 @@ in { remarshal = callPackage ../development/python-modules/remarshal { }; + renault-api = callPackage ../development/python-modules/renault-api { }; + rencode = callPackage ../development/python-modules/rencode { }; reparser = callPackage ../development/python-modules/reparser { }; @@ -8669,6 +8707,8 @@ in { streaming-form-data = callPackage ../development/python-modules/streaming-form-data { }; + streamlabswater = callPackage ../development/python-modules/streamlabswater { }; + streamz = callPackage ../development/python-modules/streamz { }; strict-rfc3339 = callPackage ../development/python-modules/strict-rfc3339 { }; @@ -8831,7 +8871,6 @@ in { tensorflow-bin_2 = callPackage ../development/python-modules/tensorflow/bin.nix { cudaSupport = pkgs.config.cudaSupport or false; - inherit (pkgs.linuxPackages) nvidia_x11; cudatoolkit = pkgs.cudatoolkit_11_0; cudnn = pkgs.cudnn_cudatoolkit_11_0; }; @@ -9449,6 +9488,8 @@ in { vsure = callPackage ../development/python-modules/vsure { }; + vt-py = callPackage ../development/python-modules/vt-py { }; + vtk = toPythonModule (pkgs.vtk.override { pythonInterpreter = python; enablePython = true; diff --git a/pkgs/top-level/release-cross.nix b/pkgs/top-level/release-cross.nix index 639c54a8a1e..dae1244786e 100644 --- a/pkgs/top-level/release-cross.nix +++ b/pkgs/top-level/release-cross.nix @@ -166,6 +166,9 @@ in i686-embedded = mapTestOnCross lib.systems.examples.i686-embedded embedded; x86_64-embedded = mapTestOnCross lib.systems.examples.x86_64-embedded embedded; + # TODO: fix cross compilation of nix{,Unstable} to netbsd and switch to common + x86_64-netbsd = mapTestOnCross lib.systems.examples.x86_64-netbsd embedded; + # we test `embedded` instead of `linuxCommon` because very few packages # successfully cross-compile to Redox so far x86_64-redox = mapTestOnCross lib.systems.examples.x86_64-unknown-redox embedded; diff --git a/pkgs/top-level/release.nix b/pkgs/top-level/release.nix index 571d345d21e..fca5d376094 100644 --- a/pkgs/top-level/release.nix +++ b/pkgs/top-level/release.nix @@ -90,6 +90,7 @@ let meta.description = "Release-critical builds for the Nixpkgs unstable channel"; constituents = [ jobs.tarball + jobs.metrics jobs.manual jobs.lib-tests jobs.pkgs-lib-tests diff --git a/pkgs/top-level/ruby-packages.nix b/pkgs/top-level/ruby-packages.nix index e37c9e277af..18c75ebd95e 100644 --- a/pkgs/top-level/ruby-packages.nix +++ b/pkgs/top-level/ruby-packages.nix @@ -265,14 +265,15 @@ version = "2.1.532"; }; CFPropertyList = { + dependencies = ["rexml"]; groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0ia09r8bj3bjhcfiyr3vlk9zx7vahfypbs2lyrxix9x1jx3lfzq4"; + sha256 = "00s388z1akvj2j77ylr1mgp02zxp4ybcgc4ds3bz4647dfk0cwxk"; type = "gem"; }; - version = "3.0.3"; + version = "3.0.4"; }; charlock_holmes = { groups = ["default"]; @@ -446,10 +447,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1j03hxvz3m82fwgx3jayw0y2iqm7zpacn88r6nfj2arkbjxmvjwz"; + sha256 = "161sjpyxipnbhwcr5kyfbcdbzs9zq20sigsazjm782cn3s466p0z"; type = "gem"; }; - version = "1.4.0"; + version = "1.5.1"; }; cocoapods-expert-difficulty = { groups = ["default"]; @@ -561,10 +562,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "12c6028bmdwrbqcb49mr5qj1p3vcijnjqbsbzywfx1isp44j9mv5"; + sha256 = "0cgdx7z9psxxrsa13fk7qc9i6jskrwcafhrdz94avzia2y6dlnsz"; type = "gem"; }; - version = "1.5.0"; + version = "1.6.0"; }; cocoapods-try = { groups = ["default"]; @@ -723,10 +724,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1fki1aipqafqlg8xy25ykk0ql1dciy9kk6lcp5gzgkh9ccmaxzf3"; + sha256 = "07cszb0zl8mqmwhc8a2yfg36vi6lbgrp4pa5bvmryrpcz9v6viwg"; type = "gem"; }; - version = "1.4.0"; + version = "1.4.1"; }; data_objects = { dependencies = ["addressable"]; @@ -888,10 +889,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0r6ik2yvsbx6jj30vck32da2bbvj4m0gf4jhp09vr75i1d6jzfvb"; + sha256 = "0afhlqgby2cizcwgh7h2sq5f77q01axjbdl25bsvfwsry9n7gyyi"; type = "gem"; }; - version = "1.7.0"; + version = "1.8.0"; }; faraday-em_http = { groups = ["default"]; @@ -978,10 +979,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1wgvaclp4h9y8zkrgz8p2hqkrgr4j7kz0366mik0970w532cbmcq"; + sha256 = "0ssxcywmb3flxsjdg13is6k01807zgzasdhj4j48dm7ac59cmksn"; type = "gem"; }; - version = "1.15.3"; + version = "1.15.4"; }; ffi-compiler = { dependencies = ["ffi" "rake"]; @@ -1611,10 +1612,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0bp001p687nsa4a8sp3q1iv8pfhs24w7s3avychjp64sdkg6jxq3"; + sha256 = "0kky3yiwagsk8gfbzn3mvl2fxlh3b39v6nawzm4wpjs6xxvvc4x0"; type = "gem"; }; - version = "1.0.1"; + version = "1.0.2"; }; markaby = { dependencies = ["builder"]; @@ -1683,10 +1684,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0dlxwc75iy0dj23x824cxpvpa7c8aqcpskksrmb32j6m66h5mkcy"; + sha256 = "1z5wvk6qi4ws1kjh7xn1rfirqw5m72bwvqacck1fjpbh33pcrwxv"; type = "gem"; }; - version = "3.2021.0704"; + version = "3.2021.0901"; }; mini_magick = { groups = ["default"]; @@ -1703,10 +1704,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0kb7jq3wjgckmkzna799y5qmvn6vg52878bkgw35qay6lflcrwih"; + sha256 = "173dp4vqvx1sl6aq83daxwn5xvb5rn3jgynjmb91swl7gmgp17yl"; type = "gem"; }; - version = "1.1.0"; + version = "1.1.1"; }; mini_portile2 = { groups = ["default"]; @@ -1886,10 +1887,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1q71y7pdihz26m3n2fnm2hd7wllmnxgxk6vcbbh27rqa14q5x5yi"; + sha256 = "1v02g7k7cxiwdcahvlxrmizn3avj2q6nsjccgilq1idc89cr081b"; type = "gem"; }; - version = "1.12.3"; + version = "1.12.5"; }; octokit = { dependencies = ["faraday" "sawyer"]; @@ -1951,10 +1952,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0055br0mibnqz0j8wvy20zry548dhkakws681bhj3ycb972awkzd"; + sha256 = "1hkfpm78c2vs1qblnva3k1grijvxh87iixcnyd83s3lxrxsjvag4"; type = "gem"; }; - version = "1.20.1"; + version = "1.21.0"; }; parser = { dependencies = ["ast"]; @@ -2045,10 +2046,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1xrf2whjycv4sd7qvf5m6zdpk0lhf1p63v66w9ha146fc7rcjkc1"; + sha256 = "11gczh6fggly245r774yl2phcnh33iv6xpqw7p9dggqrmcyaslq3"; type = "gem"; }; - version = "1.1.0"; + version = "1.2.0"; }; public_suffix = { groups = ["default"]; @@ -2066,10 +2067,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0bz9y1hxfyv73yb26nvs2kcw08gxi7nxkfc94j82hgx2sifcnv3x"; + sha256 = "0ahk9a2a05985m0037gqlpha5vdkvmwhyk8v1shkbnwkkm30k0mq"; type = "gem"; }; - version = "5.4.0"; + version = "5.5.0"; }; racc = { groups = ["default"]; @@ -2141,10 +2142,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0whc4d4jqm8kd4x3jzbax54sscm1k4pfkr5d1gpapjbzqkfj77yy"; + sha256 = "09qrfi3pgllxb08r024lln9k0qzxs57v0slsj8616xf9c0cwnwbk"; type = "gem"; }; - version = "1.4.1"; + version = "1.4.2"; }; railties = { dependencies = ["actionpack" "activesupport" "method_source" "rake" "thor"]; @@ -2498,10 +2499,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1zd93idvk2qs3accbfg7g77fb02k8qlrq1arqm4bbx2ylk9j66kf"; + sha256 = "0qx9r75bfwglzv03lwvghd9gzw66wnbhdj5pc1qg896cbzna2cc0"; type = "gem"; }; - version = "2.1.2"; + version = "2.1.3"; }; ruby2_keywords = { groups = ["default"]; @@ -2539,10 +2540,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1dld1z2mdnsf9i4fs74zdr6rfk75pkgzvvyxask5w2dsmkj7bb4m"; + sha256 = "1v846qs2pa3wnzgz95jzbcdrgl9vyjl65qiscw4q4dvm5sb7j68i"; type = "gem"; }; - version = "1.1.1"; + version = "1.2.0"; }; safe_yaml = { groups = ["default"]; @@ -2624,10 +2625,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "03pmhj4kc3ga75wy397l57bvd18jxxmrk3qsznjw93b993qgvj3z"; + sha256 = "0dxwkacc0scc1bqq10wc3v7wbh5j0jl5zcmw90kmfbgfjzl0drbr"; type = "gem"; }; - version = "5.47.0"; + version = "5.48.0"; }; sequel_pg = { dependencies = ["pg" "sequel"]; @@ -2802,10 +2803,10 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "16x542qnzybzsi65ngd16921m88sh47l8fi21y8gbz08daq4rpab"; + sha256 = "0rb9nax4k72zbriq7k98shfcj4lf54sqjpin2xm6ma7bb48ra8mc"; type = "gem"; }; - version = "0.14.2"; + version = "0.15.0"; }; tilt = { groups = ["default"]; @@ -2876,20 +2877,20 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wc47r23h063l8ysws8sy24gzh74mks81cak3lkzlrw4qkqb3sg4"; + sha256 = "0jmbimpnpjdzz8hlrppgl9spm99qh3qzbx0b81k3gkgwba8nk3yd"; type = "gem"; }; - version = "0.0.7.7"; + version = "0.0.8"; }; unicode-display_width = { groups = ["default"]; platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "06i3id27s60141x6fdnjn5rar1cywdwy64ilc59cz937303q3mna"; + sha256 = "1204c1jx2g89pc25qk5150mk7j5k90692i7ihgfzqnad6qni74h2"; type = "gem"; }; - version = "1.7.0"; + version = "1.8.0"; }; uuid4r = { groups = ["default"]; @@ -2989,9 +2990,9 @@ platforms = []; source = { remotes = ["https://rubygems.org"]; - sha256 = "1blww00r5za6vl46psaldxpllsxll78ms8rrs6qfwb1iaa8rla2d"; + sha256 = "1prdwbi9prykva3iqyk23fzgi0z7pphldybba8s76mil1fd3svif"; type = "gem"; }; - version = "1.4.11"; + version = "1.5.0"; }; } diff --git a/pkgs/top-level/wine-packages.nix b/pkgs/top-level/wine-packages.nix index 923d2b80818..b26bc361cf5 100644 --- a/pkgs/top-level/wine-packages.nix +++ b/pkgs/top-level/wine-packages.nix @@ -47,6 +47,7 @@ rec { ldapSupport = true; faudioSupport = true; vkd3dSupport = true; + embedInstallers = true; }; stable = base.override { wineRelease = "stable"; }; |