8 files changed, 88 insertions, 526 deletions
diff --git a/pkgs/tools/misc/chezmoi/default.nix b/pkgs/tools/misc/chezmoi/default.nix
index b6fffddeb53..587bc2b9278 100644
--- a/pkgs/tools/misc/chezmoi/default.nix
+++ b/pkgs/tools/misc/chezmoi/default.nix
@@ -1,24 +1,32 @@
-{ stdenv, buildGoPackage, fetchFromGitHub }:
+{ stdenv, buildGoModule, fetchFromGitHub, installShellFiles }:
 
-buildGoPackage rec {
+buildGoModule rec {
   pname = "chezmoi";
-  version = "1.5.5";
-
-  goPackagePath = "github.com/twpayne/chezmoi";
+  version = "1.7.2";
 
   src = fetchFromGitHub {
     owner = "twpayne";
     repo = "chezmoi";
     rev = "v${version}";
-    sha256 = "18kc3b2ncjzxivycx3mhqw9kbqp0sxmlgc2ddvhgj2vpvlkayzkh";
+    sha256 = "06wgfnlzcs6yfrjpy6zhcg5y844zd22manbm2sfq5vyng02bg229";
   };
 
-  goDeps = ./deps.nix;
+  modSha256 = "1y1q1lps3a8piikh8ds28yrw5r82af9pyl6vy87207z1y5v2hams";
 
   buildFlagsArray = [
-    "-ldflags=-s -w -X ${goPackagePath}/cmd.VersionStr=${version}"
+    "-ldflags=-s -w -X github.com/twpayne/chezmoi/cmd.VersionStr=${version}"
   ];
 
+  nativeBuildInputs = [ installShellFiles ];
+
+  postInstall = ''
+    installShellCompletion --bash completions/chezmoi-completion.bash
+    installShellCompletion --fish completions/chezmoi.fish
+    installShellCompletion --zsh completions/chezmoi.zsh
+  '';
+
+  subPackages = [ "." ];
+
   meta = with stdenv.lib; {
     homepage = https://github.com/twpayne/chezmoi;
     description = "Manage your dotfiles across multiple machines, securely";
diff --git a/pkgs/tools/misc/chezmoi/deps.nix b/pkgs/tools/misc/chezmoi/deps.nix
deleted file mode 100644
index 6641a58931d..00000000000
--- a/pkgs/tools/misc/chezmoi/deps.nix
+++ /dev/null
@@ -1,507 +0,0 @@
-# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix)
-[
-  {
-    goPackagePath = "github.com/BurntSushi/toml";
-    fetch = {
-      type = "git";
-      url = "https://github.com/BurntSushi/toml";
-      rev = "v0.3.1";
-      sha256 = "1fjdwwfzyzllgiwydknf1pwjvy49qxfsczqx5gz3y0izs7as99j6";
-    };
-  }
-  {
-    goPackagePath = "github.com/Masterminds/semver";
-    fetch = {
-      type = "git";
-      url = "https://github.com/Masterminds/semver";
-      rev = "v1.4.2";
-      sha256 = "0k2fpk2x8jbvqkqxx5hkx1ygrsppzmzypqb90i1r33yq7ac7zlxj";
-    };
-  }
-  {
-    goPackagePath = "github.com/Masterminds/sprig";
-    fetch = {
-      type = "git";
-      url = "https://github.com/Masterminds/sprig";
-      rev = "v2.17.1";
-      sha256 = "0iiwga57100r780k2d509fzx67x6l8z0wjl84pyzg5mpy6zp2y9y";
-    };
-  }
-  {
-    goPackagePath = "github.com/aokoli/goutils";
-    fetch = {
-      type = "git";
-      url = "https://github.com/aokoli/goutils";
-      rev = "v1.1.0";
-      sha256 = "180px47gj936qyk5bkv5mbbgiil9abdjq6kwkf7sq70vyi9mcfiq";
-    };
-  }
-  {
-    goPackagePath = "github.com/armon/consul-api";
-    fetch = {
-      type = "git";
-      url = "https://github.com/armon/consul-api";
-      rev = "eb2c6b5be1b6";
-      sha256 = "1j6fdr1sg36qy4n4xjl7brq739fpm5npq98cmvklzjc9qrx98nk9";
-    };
-  }
-  {
-    goPackagePath = "github.com/coreos/etcd";
-    fetch = {
-      type = "git";
-      url = "https://github.com/coreos/etcd";
-      rev = "v3.3.10";
-      sha256 = "1x2ii1hj8jraba8rbxz6dmc03y3sjxdnzipdvg6fywnlq1f3l3wl";
-    };
-  }
-  {
-    goPackagePath = "github.com/coreos/go-etcd";
-    fetch = {
-      type = "git";
-      url = "https://github.com/coreos/go-etcd";
-      rev = "v2.0.0";
-      sha256 = "1xb34hzaa1lkbq5vkzy9vcz6gqwj7hp6cdbvyack2bf28dwn33jj";
-    };
-  }
-  {
-    goPackagePath = "github.com/coreos/go-semver";
-    fetch = {
-      type = "git";
-      url = "https://github.com/coreos/go-semver";
-      rev = "v0.2.0";
-      sha256 = "1gghi5bnqj50hfxhqc1cxmynqmh2yk9ii7ab9gsm75y5cp94ymk0";
-    };
-  }
-  {
-    goPackagePath = "github.com/danieljoos/wincred";
-    fetch = {
-      type = "git";
-      url = "https://github.com/danieljoos/wincred";
-      rev = "v1.0.1";
-      sha256 = "1bb1928nnikx5036aw4152p55g8xgwx42rv0n2i5zydh1031f50m";
-    };
-  }
-  {
-    goPackagePath = "github.com/davecgh/go-spew";
-    fetch = {
-      type = "git";
-      url = "https://github.com/davecgh/go-spew";
-      rev = "v1.1.1";
-      sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y";
-    };
-  }
-  {
-    goPackagePath = "github.com/fsnotify/fsnotify";
-    fetch = {
-      type = "git";
-      url = "https://github.com/fsnotify/fsnotify";
-      rev = "v1.4.7";
-      sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g";
-    };
-  }
-  {
-    goPackagePath = "github.com/godbus/dbus";
-    fetch = {
-      type = "git";
-      url = "https://github.com/godbus/dbus";
-      rev = "v4.1.0";
-      sha256 = "1ckvg15zdsgmbn4mi36cazkb407ixc9mmyf7vwj8b8wi3d00rgn9";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/protobuf";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/protobuf";
-      rev = "v1.2.0";
-      sha256 = "0kf4b59rcbb1cchfny2dm9jyznp8ri2hsb14n8iak1q8986xa0ab";
-    };
-  }
-  {
-    goPackagePath = "github.com/google/go-github";
-    fetch = {
-      type = "git";
-      url = "https://github.com/google/go-github";
-      rev = "v25.0.1";
-      sha256 = "1wggj64dm73zmav64qfgw8v3pkzxxmlaqrccvs5rf66j0wij9g20";
-    };
-  }
-  {
-    goPackagePath = "github.com/google/go-querystring";
-    fetch = {
-      type = "git";
-      url = "https://github.com/google/go-querystring";
-      rev = "v1.0.0";
-      sha256 = "0xl12bqyvmn4xcnf8p9ksj9rmnr7s40pvppsdmy8n9bzw1db0iwz";
-    };
-  }
-  {
-    goPackagePath = "github.com/google/renameio";
-    fetch = {
-      type = "git";
-      url = "https://github.com/google/renameio";
-      rev = "v0.1.0";
-      sha256 = "1ki2x5a9nrj17sn092d6n4zr29lfg5ydv4xz5cp58z6cw8ip43jx";
-    };
-  }
-  {
-    goPackagePath = "github.com/google/uuid";
-    fetch = {
-      type = "git";
-      url = "https://github.com/google/uuid";
-      rev = "v1.1.0";
-      sha256 = "0yx4kiafyshdshrmrqcf2say5mzsviz7r94a0y1l6xfbkkyvnc86";
-    };
-  }
-  {
-    goPackagePath = "github.com/hashicorp/hcl";
-    fetch = {
-      type = "git";
-      url = "https://github.com/hashicorp/hcl";
-      rev = "v1.0.0";
-      sha256 = "0q6ml0qqs0yil76mpn4mdx4lp94id8vbv575qm60jzl1ijcl5i66";
-    };
-  }
-  {
-    goPackagePath = "github.com/huandu/xstrings";
-    fetch = {
-      type = "git";
-      url = "https://github.com/huandu/xstrings";
-      rev = "v1.2.0";
-      sha256 = "0bn1kac5vcspxdpx4bygr4gngdbk67pnbqc04b0f7a4ny25n10iq";
-    };
-  }
-  {
-    goPackagePath = "github.com/imdario/mergo";
-    fetch = {
-      type = "git";
-      url = "https://github.com/imdario/mergo";
-      rev = "v0.3.7";
-      sha256 = "05ir0jj74w0yfi1lrhjd97v759in1dpsma64cgmbiqvyp6hfmmf8";
-    };
-  }
-  {
-    goPackagePath = "github.com/inconshreveable/mousetrap";
-    fetch = {
-      type = "git";
-      url = "https://github.com/inconshreveable/mousetrap";
-      rev = "v1.0.0";
-      sha256 = "1mn0kg48xkd74brf48qf5hzp0bc6g8cf5a77w895rl3qnlpfw152";
-    };
-  }
-  {
-    goPackagePath = "github.com/kr/pty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kr/pty";
-      rev = "v1.1.1";
-      sha256 = "0383f0mb9kqjvncqrfpidsf8y6ns5zlrc91c6a74xpyxjwvzl2y6";
-    };
-  }
-  {
-    goPackagePath = "github.com/kr/text";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kr/text";
-      rev = "v0.1.0";
-      sha256 = "1gm5bsl01apvc84bw06hasawyqm4q84vx1pm32wr9jnd7a8vjgj1";
-    };
-  }
-  {
-    goPackagePath = "github.com/magiconair/properties";
-    fetch = {
-      type = "git";
-      url = "https://github.com/magiconair/properties";
-      rev = "v1.8.0";
-      sha256 = "1a10362wv8a8qwb818wygn2z48lgzch940hvpv81hv8gc747ajxn";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-isatty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-isatty";
-      rev = "v0.0.7";
-      sha256 = "1i77aq4gf9as03m8fpfh8fq49n4z9j7548blrcsidm1xhslzk5xd";
-    };
-  }
-  {
-    goPackagePath = "github.com/mitchellh/mapstructure";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mitchellh/mapstructure";
-      rev = "v1.1.2";
-      sha256 = "03bpv28jz9zhn4947saqwi328ydj7f6g6pf1m2d4m5zdh5jlfkrr";
-    };
-  }
-  {
-    goPackagePath = "github.com/pelletier/go-toml";
-    fetch = {
-      type = "git";
-      url = "https://github.com/pelletier/go-toml";
-      rev = "v1.2.0";
-      sha256 = "1fjzpcjng60mc3a4b2ql5a00d5gah84wj740dabv9kq67mpg8fxy";
-    };
-  }
-  {
-    goPackagePath = "github.com/pmezard/go-difflib";
-    fetch = {
-      type = "git";
-      url = "https://github.com/pmezard/go-difflib";
-      rev = "v1.0.0";
-      sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw";
-    };
-  }
-  {
-    goPackagePath = "github.com/russross/blackfriday";
-    fetch = {
-      type = "git";
-      url = "https://github.com/russross/blackfriday";
-      rev = "v2.0.1";
-      sha256 = "0nlz7isdd4rgnwzs68499hlwicxz34j2k2a0b8jy0y7ycd2bcr5j";
-    };
-  }
-  {
-    goPackagePath = "github.com/shurcooL/sanitized_anchor_name";
-    fetch = {
-      type = "git";
-      url = "https://github.com/shurcooL/sanitized_anchor_name";
-      rev = "v1.0.0";
-      sha256 = "1gv9p2nr46z80dnfjsklc6zxbgk96349sdsxjz05f3z6wb6m5l8f";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/afero";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/afero";
-      rev = "v1.2.2";
-      sha256 = "0j9r65qgd58324m85lkl49vk9dgwd62g7dwvkfcm3k6i9dc555a9";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/cast";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/cast";
-      rev = "v1.3.0";
-      sha256 = "0xq1ffqj8y8h7dcnm0m9lfrh0ga7pssnn2c1dnr09chqbpn4bdc5";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/cobra";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/cobra";
-      rev = "v0.0.3";
-      sha256 = "1q1nsx05svyv9fv3fy6xv6gs9ffimkyzsfm49flvl3wnvf1ncrkd";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/jwalterweatherman";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/jwalterweatherman";
-      rev = "v1.0.0";
-      sha256 = "093fmmvavv84pv4q84hav7ph3fmrq87bvspjj899q0qsx37yvdr8";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/pflag";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/pflag";
-      rev = "v1.0.3";
-      sha256 = "1cj3cjm7d3zk0mf1xdybh0jywkbbw7a6yr3y22x9sis31scprswd";
-    };
-  }
-  {
-    goPackagePath = "github.com/spf13/viper";
-    fetch = {
-      type = "git";
-      url = "https://github.com/spf13/viper";
-      rev = "v1.3.1";
-      sha256 = "1190mg04718r03qriav99sf4kx2n7wdgr8vdni15f74bpbzrdjrl";
-    };
-  }
-  {
-    goPackagePath = "github.com/stretchr/objx";
-    fetch = {
-      type = "git";
-      url = "https://github.com/stretchr/objx";
-      rev = "v0.2.0";
-      sha256 = "0pcdvakxgddaiwcdj73ra4da05a3q4cgwbpm2w75ycq4kzv8ij8k";
-    };
-  }
-  {
-    goPackagePath = "github.com/stretchr/testify";
-    fetch = {
-      type = "git";
-      url = "https://github.com/stretchr/testify";
-      rev = "v1.3.0";
-      sha256 = "0wjchp2c8xbgcbbq32w3kvblk6q6yn533g78nxl6iskq6y95lxsy";
-    };
-  }
-  {
-    goPackagePath = "github.com/twpayne/go-difflib";
-    fetch = {
-      type = "git";
-      url = "https://github.com/twpayne/go-difflib";
-      rev = "v1.3.0";
-      sha256 = "01lidr7brrdv4xqx87n6c2ppyaj8rdf9lqj85qhbbalwy6z34fj8";
-    };
-  }
-  {
-    goPackagePath = "github.com/twpayne/go-shell";
-    fetch = {
-      type = "git";
-      url = "https://github.com/twpayne/go-shell";
-      rev = "v0.0.1";
-      sha256 = "0nbbfxdwqy14izbfbk8c8ia90l31wbhkcwd2r7v6jhz58iaxcvxk";
-    };
-  }
-  {
-    goPackagePath = "github.com/twpayne/go-vfs";
-    fetch = {
-      type = "git";
-      url = "https://github.com/twpayne/go-vfs";
-      rev = "v1.0.6";
-      sha256 = "0sqjng5qm4s7crq9s1f5y5niq4wss6dizip62zx37iyvws1yngjd";
-    };
-  }
-  {
-    goPackagePath = "github.com/twpayne/go-vfsafero";
-    fetch = {
-      type = "git";
-      url = "https://github.com/twpayne/go-vfsafero";
-      rev = "v1.0.0";
-      sha256 = "18jwxhlrjd06z8xzg9ij0irl4f79jfy5jpwiz6xqlhzb1fja19pw";
-    };
-  }
-  {
-    goPackagePath = "github.com/twpayne/go-xdg";
-    fetch = {
-      type = "git";
-      url = "https://github.com/twpayne/go-xdg";
-      rev = "v3.1.0";
-      sha256 = "0j8q7yzixs6jlaad0lpa8hs6b240gm2cmy0yxgnprrbpa0y2r7ln";
-    };
-  }
-  {
-    goPackagePath = "github.com/ugorji/go";
-    fetch = {
-      type = "git";
-      url = "https://github.com/ugorji/go";
-      rev = "d75b2dcb6bc8";
-      sha256 = "0di1k35gpq9bp958ywranpbskx2vdwlb38s22vl9rybm3wa5g3ps";
-    };
-  }
-  {
-    goPackagePath = "github.com/xordataexchange/crypt";
-    fetch = {
-      type = "git";
-      url = "https://github.com/xordataexchange/crypt";
-      rev = "b2862e3d0a77";
-      sha256 = "04q3856anpzl4gdfgmg7pbp9cx231nkz3ymq2xp27rnmmwhfxr8y";
-    };
-  }
-  {
-    goPackagePath = "github.com/zalando/go-keyring";
-    fetch = {
-      type = "git";
-      url = "https://github.com/zalando/go-keyring";
-      rev = "6d81c293b3fb";
-      sha256 = "1wah726fi08h6ga5wnwxd1zyxq7ckp3qliql44bxgliw2p35kkyb";
-    };
-  }
-  {
-    goPackagePath = "go.etcd.io/bbolt";
-    fetch = {
-      type = "git";
-      url = "https://github.com/etcd-io/bbolt";
-      rev = "4af6cfab7010";
-      sha256 = "1zgirl82lph606vw39wj4mvk8bkq2bakvnx49dpq7l5dsdhiydpv";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/crypto";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/crypto";
-      rev = "c2843e01d9a2";
-      sha256 = "01xgxbj5r79nmisdvpq48zfy8pzaaj90bn6ngd4nf33j9ar1dp8r";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/net";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/net";
-      rev = "d8887717615a";
-      sha256 = "1wfm6ngxjyj7v5a2dqib6lw8bb2rdnf1kl48diykxjrsddn0s163";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/oauth2";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/oauth2";
-      rev = "d2e6202438be";
-      sha256 = "0wbn75fd10485nb93bm4kqldqifdim5xqy4v7r5sdvimvf3fyhn7";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/sync";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sync";
-      rev = "e225da77a7e6";
-      sha256 = "0bh3583smcfw6jw3w6lp0za93rz7hpxfdz8vhxng75b7a6vdlw4p";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/sys";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sys";
-      rev = "10058d7d4faa";
-      sha256 = "0y83433yjgsr7057h99g5ayljzlivx2bnkcp01xnzqz8lppv8fql";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/text";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/text";
-      rev = "v0.3.0";
-      sha256 = "0r6x6zjzhr8ksqlpiwm5gdd7s209kwk5p4lw54xjvz10cs3qlq19";
-    };
-  }
-  {
-    goPackagePath = "google.golang.org/appengine";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/appengine";
-      rev = "v1.1.0";
-      sha256 = "1pz202zszg8f35dk5pfhwgcdi3r6dx1l4yk6x6ly7nb4j45zi96x";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/check.v1";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/check.v1";
-      rev = "20d25e280405";
-      sha256 = "0k1m83ji9l1a7ng8a7v40psbymxasmssbrrhpdv2wl4rhs0nc3np";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/yaml.v2";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/yaml.v2";
-      rev = "v2.2.2";
-      sha256 = "01wj12jzsdqlnidpyjssmj0r4yavlqy7dwrg7adqd8dicjc4ncsa";
-    };
-  }
-]
diff --git a/pkgs/tools/misc/dust/default.nix b/pkgs/tools/misc/dust/default.nix
index 4dffae557a4..68f06f1ceb8 100644
--- a/pkgs/tools/misc/dust/default.nix
+++ b/pkgs/tools/misc/dust/default.nix
@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "dust";
-  version = "0.2.3";
+  version = "0.4.1.2";
 
   src = fetchFromGitHub {
     owner = "bootandy";
     repo = "dust";
     rev = "v${version}";
-    sha256 = "1l8z1daiq2x92449p2ciblcwl0ddgr3vqj2dsd3z8jj3y0z8j51s";
+    sha256 = "0a2n96p6z4y09l5z617qbpm8lgxvfagd1l950d2gz9xw4xf1ik5w";
   };
 
-  cargoSha256 = "1bby08ijpwb8676pgm87k80s0n0fqsxc3wmz0v8p9s85yzkflnx5";
+  cargoSha256 = "0cpgxkgz10na90r3fgz8hs20vihqdcc8983inn71fq90627bhdx7";
 
   doCheck = false;
 
diff --git a/pkgs/tools/misc/file/default.nix b/pkgs/tools/misc/file/default.nix
index b3ed85ca228..a06b38c0ec7 100644
--- a/pkgs/tools/misc/file/default.nix
+++ b/pkgs/tools/misc/file/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, file, zlib, libgnurx }:
+{ stdenv, fetchurl, fetchpatch, file, zlib, libgnurx }:
 
 stdenv.mkDerivation rec {
   pname = "file";
@@ -12,6 +12,14 @@ stdenv.mkDerivation rec {
     sha256 = "0zz0p9bqnswfx0c16j8k62ivjq1m16x10xqv4hy9lcyxyxkkkhg9";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "CVE-2019-18218.patch";
+      url = "https://sources.debian.org/data/main/f/file/1:5.37-6/debian/patches/cherry-pick.FILE5_37-67-g46a8443f.limit-the-number-of-elements-in-a-vector-found-by-oss-fuzz.patch";
+      sha256 = "1i22y91yndc3n2p2ngczp1lwil8l05sp8ciicil74xrc5f91y6mj";
+    })
+  ];
+
   nativeBuildInputs = stdenv.lib.optional (stdenv.hostPlatform != stdenv.buildPlatform) file;
   buildInputs = [ zlib ]
               ++ stdenv.lib.optional stdenv.hostPlatform.isWindows libgnurx;
diff --git a/pkgs/tools/misc/marlin-calc/default.nix b/pkgs/tools/misc/marlin-calc/default.nix
index 5c175053fc9..c7222f696c9 100644
--- a/pkgs/tools/misc/marlin-calc/default.nix
+++ b/pkgs/tools/misc/marlin-calc/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation {
   pname = "marlin-calc";
-  version = "2019-06-04";
+  version = "2019-10-17";
 
   src = fetchFromGitHub {
     owner = "eyal0";
     repo = "Marlin";
-    rev = "4120d1c72d6c32e9c5cc745c05d20963ba4bbca3";
-    sha256 = "06aly7s4k1r31njm43sbxq9a0127sw43pnaddh92a3cc39rbj2va";
+    rev = "3d5a5c86bea35a2a169eb56c70128bf2d070feef";
+    sha256 = "14sqajm361gnrcqv84g7kbmyqm8pppbhqsabszc4j2cn7vbwkdg5";
   };
 
   buildPhase = ''
diff --git a/pkgs/tools/misc/parallel/default.nix b/pkgs/tools/misc/parallel/default.nix
index 46ff72a678a..27fd51ed447 100644
--- a/pkgs/tools/misc/parallel/default.nix
+++ b/pkgs/tools/misc/parallel/default.nix
@@ -1,11 +1,11 @@
 { fetchurl, stdenv, perl, makeWrapper, procps }:
 
 stdenv.mkDerivation rec {
-  name = "parallel-20190922";
+  name = "parallel-20191022";
 
   src = fetchurl {
     url = "mirror://gnu/parallel/${name}.tar.bz2";
-    sha256 = "0qrw34rpp8g5knb2nhs8z1hz9i42nxjn6i12m4rblm0anhnfwbr8";
+    sha256 = "1a89x5ix9kls1abj8zkgxdf3g3s5phzb83xcd4cwpz4szfjfw6v4";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/tools/misc/trac/default.nix b/pkgs/tools/misc/trac/default.nix
new file mode 100644
index 00000000000..39bbf6850eb
--- /dev/null
+++ b/pkgs/tools/misc/trac/default.nix
@@ -0,0 +1,53 @@
+{ lib
+, buildPythonApplication
+, fetchPypi
+, Babel
+, docutils
+, pygments
+, pytz
+, jinja2
+, pysqlite
+, psycopg2
+, pymysql
+, git
+, setuptools
+}:
+
+
+buildPythonApplication rec {
+  pname = "trac";
+  version = "1.4";
+
+  src = fetchPypi {
+    inherit version;
+    pname = "Trac";
+    sha256 = "1cg51rg0vb9vf23wgn28z3szlxhwnxprj5m0mvibqyypi123bvx1";
+  };
+
+  prePatch = ''
+    # Removing the date format tests as they are outdated
+    substituteInPlace trac/util/tests/__init__.py \
+      --replace "suite.addTest(datefmt.test_suite())" ""
+  '';
+
+  propagatedBuildInputs = [
+    Babel
+    docutils
+    pygments
+    pytz
+    jinja2
+    pysqlite
+    psycopg2
+    pymysql
+    git
+    setuptools
+  ];
+
+  meta = with lib; {
+    description = "Integrated SCM, wiki, issue tracker and project environment";
+    homepage = "https://trac.edgewall.org/";
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ mmahut ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/tools/misc/yad/default.nix b/pkgs/tools/misc/yad/default.nix
index 946a07d17b4..776b41ac1aa 100644
--- a/pkgs/tools/misc/yad/default.nix
+++ b/pkgs/tools/misc/yad/default.nix
@@ -3,13 +3,13 @@
 
 stdenv.mkDerivation rec {
   pname = "yad";
-  version = "0.42.0";
+  version = "5.0";
 
   src = fetchFromGitHub {
     owner = "v1cont";
     repo = "yad";
     rev = "v${version}";
-    sha256 = "0ym8pgbzx7ydk5rmi2kwwdyzi6pdpcps86i0c20cqcjmqh8kdl36";
+    sha256 = "07rd61hvilsxxrj7lf8c9k0a8glj07s48m7ya8d45030r90g3lvc";
   };
 
   configureFlags = [