diff options
Diffstat (limited to 'pkgs/development/python-modules/nipype/default.nix')
-rw-r--r-- | pkgs/development/python-modules/nipype/default.nix | 21 |
1 files changed, 18 insertions, 3 deletions
diff --git a/pkgs/development/python-modules/nipype/default.nix b/pkgs/development/python-modules/nipype/default.nix index 30ee2b28561..668e34a2247 100644 --- a/pkgs/development/python-modules/nipype/default.nix +++ b/pkgs/development/python-modules/nipype/default.nix @@ -21,8 +21,12 @@ , simplejson , traits , xvfbwrapper +, pytestcov +, codecov # other dependencies , which +, bash +, glibcLocales }: assert !isPy3k -> configparser != null; @@ -36,9 +40,14 @@ buildPythonPackage rec { sha256 = "47f62fda3d6b9a37aa407a6b78c80e91240aa71e61191ed00da68b02839fe258"; }; - doCheck = false; # fails with TypeError: None is not callable - checkInputs = [ which ]; - buildInputs = [ pytest mock ]; # required in installPhase + # see https://github.com/nipy/nipype/issues/2240 + patches = [ ./prov-version.patch ]; + + postPatch = '' + substituteInPlace nipype/interfaces/base/tests/test_core.py \ + --replace "/usr/bin/env bash" "${bash}/bin/bash" + ''; + propagatedBuildInputs = [ click dateutil @@ -59,6 +68,12 @@ buildPythonPackage rec { configparser ]; + checkInputs = [ pytest mock pytestcov codecov which glibcLocales ]; + + checkPhase = '' + LC_ALL="en_US.UTF-8" py.test -v --doctest-modules nipype + ''; + meta = with stdenv.lib; { homepage = http://nipy.org/nipype/; description = "Neuroimaging in Python: Pipelines and Interfaces"; |