diff options
152 files changed, 1881 insertions, 1988 deletions
diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS index f3ac8ad96b7..3392fa5dab9 100644 --- a/.github/CODEOWNERS +++ b/.github/CODEOWNERS @@ -164,7 +164,7 @@ /pkgs/top-level/emacs-packages.nix @adisbladis # VimPlugins -/pkgs/misc/vim-plugins @jonringer +/pkgs/misc/vim-plugins @jonringer @softinio # VsCode Extensions /pkgs/misc/vscode-extensions @jonringer diff --git a/maintainers/maintainer-list.nix b/maintainers/maintainer-list.nix index 8a5a5e50d01..0da9e6df171 100644 --- a/maintainers/maintainer-list.nix +++ b/maintainers/maintainer-list.nix @@ -2550,6 +2550,12 @@ githubId = 1943632; name = "fro_ozen"; }; + Frostman = { + email = "me@slukjanov.name"; + github = "Frostman"; + githubId = 134872; + name = "Sergei Lukianov"; + }; frontsideair = { email = "photonia@gmail.com"; github = "frontsideair"; diff --git a/nixos/doc/manual/configuration/x-windows.xml b/nixos/doc/manual/configuration/x-windows.xml index 55ad9fe6e65..06dd7c8bfb9 100644 --- a/nixos/doc/manual/configuration/x-windows.xml +++ b/nixos/doc/manual/configuration/x-windows.xml @@ -85,11 +85,14 @@ <programlisting> <xref linkend="opt-services.xserver.displayManager.defaultSession"/> = "none+i3"; </programlisting> - And, finally, to enable auto-login for a user <literal>johndoe</literal>: + Every display manager in NixOS supports auto-login, here is an example + using lightdm for a user <literal>alice</literal>: <programlisting> -<xref linkend="opt-services.xserver.displayManager.auto.enable"/> = true; -<xref linkend="opt-services.xserver.displayManager.auto.user"/> = "johndoe"; +<xref linkend="opt-services.xserver.displayManager.lightdm.enable"/> = true; +<xref linkend="opt-services.xserver.displayManager.lightdm.autoLogin.enable"/> = true; +<xref linkend="opt-services.xserver.displayManager.lightdm.autoLogin.user"/> = "alice"; </programlisting> + The options are named identically for all other display managers. </para> </simplesect> <simplesect xml:id="sec-x11-graphics-cards-nvidia"> diff --git a/nixos/doc/manual/release-notes/rl-2003.xml b/nixos/doc/manual/release-notes/rl-2003.xml index e9a1d57050c..67e7c861eff 100644 --- a/nixos/doc/manual/release-notes/rl-2003.xml +++ b/nixos/doc/manual/release-notes/rl-2003.xml @@ -452,6 +452,44 @@ users.users.me = please refer to the <link xlink:href="https://www.citrix.com/de-de/support/product-lifecycle/milestones/receiver.html">support and maintenance information</link> from upstream. </para> </listitem> + <listitem> + <para> + The <literal>gcc5</literal> and <literal>gfortran5</literal> packages have been removed. + </para> + </listitem> + <listitem> + <para> + The <option>services.xserver.displayManager.auto</option> module has been removed. + It was only intended for use in internal NixOS tests, and gave the false impression + of it being a special display manager when it's actually LightDM. + Please use the <xref linkend="opt-services.xserver.displayManager.lightdm.autoLogin"/> options instead, + or any other display manager in NixOS as they all support auto-login. If you used this module specifically + because it permitted root auto-login you can override the lightdm-autologin pam module like: +<programlisting> +<link xlink:href="#opt-security.pam.services._name__.text">security.pam.services.lightdm-autologin.text</link> = lib.mkForce '' + auth requisite pam_nologin.so + auth required pam_succeed_if.so quiet + auth required pam_permit.so + + account include lightdm + + password include lightdm + + session include lightdm +''; +</programlisting> + The difference is the: +<programlisting> +auth required pam_succeed_if.so quiet +</programlisting> + line, where default it's: +<programlisting> +auth required pam_succeed_if.so uid >= 1000 quiet +</programlisting> + not permitting users with uid's below 1000 (like root). + All other display managers in NixOS are configured like this. + </para> + </listitem> </itemizedlist> </section> diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 53b10ec39ef..b6b41f6a169 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -117,6 +117,7 @@ ./programs/fish.nix ./programs/freetds.nix ./programs/fuse.nix + ./programs/geary.nix ./programs/gnome-disks.nix ./programs/gnome-documents.nix ./programs/gnome-terminal.nix @@ -280,6 +281,7 @@ ./services/databases/riak.nix ./services/databases/riak-cs.nix ./services/databases/stanchion.nix + ./services/databases/victoriametrics.nix ./services/databases/virtuoso.nix ./services/desktops/accountsservice.nix ./services/desktops/bamf.nix @@ -426,6 +428,7 @@ ./services/misc/exhibitor.nix ./services/misc/felix.nix ./services/misc/folding-at-home.nix + ./services/misc/freeswitch.nix ./services/misc/fstrim.nix ./services/misc/gammu-smsd.nix ./services/misc/geoip-updater.nix @@ -864,7 +867,6 @@ ./services/x11/unclutter.nix ./services/x11/unclutter-xfixes.nix ./services/x11/desktop-managers/default.nix - ./services/x11/display-managers/auto.nix ./services/x11/display-managers/default.nix ./services/x11/display-managers/gdm.nix ./services/x11/display-managers/lightdm.nix diff --git a/nixos/modules/programs/geary.nix b/nixos/modules/programs/geary.nix new file mode 100644 index 00000000000..01803bc411e --- /dev/null +++ b/nixos/modules/programs/geary.nix @@ -0,0 +1,20 @@ +{ config, pkgs, lib, ... }: + +with lib; + +let + cfg = config.programs.geary; + +in { + options = { + programs.geary.enable = mkEnableOption "Geary, a Mail client for GNOME 3"; + }; + + config = mkIf cfg.enable { + environment.systemPackages = [ pkgs.gnome3.geary ]; + programs.dconf.enable = true; + services.gnome3.gnome-keyring.enable = true; + services.gnome3.gnome-online-accounts.enable = true; + }; +} + diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix index 26de8a18d92..dbe687d8e22 100644 --- a/nixos/modules/rename.nix +++ b/nixos/modules/rename.nix @@ -34,6 +34,13 @@ with lib; as the underlying package isn't being maintained. Working alternatives are libinput and synaptics. '') + (mkRemovedOptionModule [ "services" "xserver" "displayManager" "auto" ] '' + The services.xserver.displayManager.auto module has been removed + because it was only intended for use in internal NixOS tests, and gave the + false impression of it being a special display manager when it's actually + LightDM. Please use the services.xserver.displayManager.lightdm.autoLogin options + instead, or any other display manager in NixOS as they all support auto-login. + '') # Do NOT add any option renames here, see top of the file ]; diff --git a/nixos/modules/services/databases/victoriametrics.nix b/nixos/modules/services/databases/victoriametrics.nix new file mode 100644 index 00000000000..cb6bf8508fb --- /dev/null +++ b/nixos/modules/services/databases/victoriametrics.nix @@ -0,0 +1,70 @@ +{ config, pkgs, lib, ... }: +let cfg = config.services.victoriametrics; in +{ + options.services.victoriametrics = with lib; { + enable = mkEnableOption "victoriametrics"; + package = mkOption { + type = types.package; + default = pkgs.victoriametrics; + defaultText = "pkgs.victoriametrics"; + description = '' + The VictoriaMetrics distribution to use. + ''; + }; + listenAddress = mkOption { + default = ":8428"; + type = types.str; + description = '' + The listen address for the http interface. + ''; + }; + retentionPeriod = mkOption { + type = types.int; + default = 1; + description = '' + Retention period in months. + ''; + }; + extraOptions = mkOption { + type = types.listOf types.str; + default = []; + description = '' + Extra options to pass to VictoriaMetrics. See the README: <link + xlink:href="https://github.com/VictoriaMetrics/VictoriaMetrics/blob/master/README.md" /> + or <command>victoriametrics -help</command> for more + information. + ''; + }; + }; + config = lib.mkIf cfg.enable { + systemd.services.victoriametrics = { + description = "VictoriaMetrics time series database"; + after = [ "network.target" ]; + serviceConfig = { + Restart = "on-failure"; + RestartSec = 1; + StartLimitBurst = 5; + StateDirectory = "victoriametrics"; + DynamicUser = true; + ExecStart = '' + ${cfg.package}/bin/victoria-metrics \ + -storageDataPath=/var/lib/victoriametrics \ + -httpListenAddr ${cfg.listenAddress} + -retentionPeriod ${toString cfg.retentionPeriod} + ${lib.escapeShellArgs cfg.extraOptions} + ''; + }; + wantedBy = [ "multi-user.target" ]; + + postStart = + let + bindAddr = (lib.optionalString (lib.hasPrefix ":" cfg.listenAddress) "127.0.0.1") + cfg.listenAddress; + in + lib.mkBefore '' + until ${lib.getBin pkgs.curl}/bin/curl -s -o /dev/null http://${bindAddr}/ping; do + sleep 1; + done + ''; + }; + }; +} diff --git a/nixos/modules/services/mail/spamassassin.nix b/nixos/modules/services/mail/spamassassin.nix index 75442c7cdb5..2d5fb40fad3 100644 --- a/nixos/modules/services/mail/spamassassin.nix +++ b/nixos/modules/services/mail/spamassassin.nix @@ -6,15 +6,6 @@ let cfg = config.services.spamassassin; spamassassin-local-cf = pkgs.writeText "local.cf" cfg.config; - spamdEnv = pkgs.buildEnv { - name = "spamd-env"; - paths = []; - postBuild = '' - ln -sf ${spamassassin-init-pre} $out/init.pre - ln -sf ${spamassassin-local-cf} $out/local.cf - ''; - }; - in { @@ -120,13 +111,11 @@ in }; config = mkIf cfg.enable { + environment.etc."mail/spamassassin/init.pre".source = cfg.initPreConf; + environment.etc."mail/spamassassin/local.cf".source = spamassassin-local-cf; # Allow users to run 'spamc'. - - environment = { - etc.spamassassin.source = spamdEnv; - systemPackages = [ pkgs.spamassassin ]; - }; + environment.systemPackages = [ pkgs.spamassassin ]; users.users.spamd = { description = "Spam Assassin Daemon"; @@ -141,7 +130,7 @@ in systemd.services.sa-update = { script = '' set +e - ${pkgs.su}/bin/su -s "${pkgs.bash}/bin/bash" -c "${pkgs.spamassassin}/bin/sa-update --gpghomedir=/var/lib/spamassassin/sa-update-keys/ --siteconfigpath=${spamdEnv}/" spamd + ${pkgs.su}/bin/su -s "${pkgs.bash}/bin/bash" -c "${pkgs.spamassassin}/bin/sa-update --gpghomedir=/var/lib/spamassassin/sa-update-keys/" spamd v=$? set -e @@ -172,7 +161,7 @@ in after = [ "network.target" ]; serviceConfig = { - ExecStart = "${pkgs.spamassassin}/bin/spamd ${optionalString cfg.debug "-D"} --username=spamd --groupname=spamd --siteconfigpath=${spamdEnv} --virtual-config-dir=/var/lib/spamassassin/user-%u --allow-tell --pidfile=/run/spamd.pid"; + ExecStart = "${pkgs.spamassassin}/bin/spamd ${optionalString cfg.debug "-D"} --username=spamd --groupname=spamd --virtual-config-dir=/var/lib/spamassassin/user-%u --allow-tell --pidfile=/run/spamd.pid"; ExecReload = "${pkgs.coreutils}/bin/kill -HUP $MAINPID"; }; @@ -183,7 +172,7 @@ in mkdir -p /var/lib/spamassassin chown spamd:spamd /var/lib/spamassassin -R set +e - ${pkgs.su}/bin/su -s "${pkgs.bash}/bin/bash" -c "${pkgs.spamassassin}/bin/sa-update --gpghomedir=/var/lib/spamassassin/sa-update-keys/ --siteconfigpath=${spamdEnv}/" spamd + ${pkgs.su}/bin/su -s "${pkgs.bash}/bin/bash" -c "${pkgs.spamassassin}/bin/sa-update --gpghomedir=/var/lib/spamassassin/sa-update-keys/" spamd v=$? set -e if [ $v -gt 1 ]; then diff --git a/nixos/modules/services/misc/freeswitch.nix b/nixos/modules/services/misc/freeswitch.nix new file mode 100644 index 00000000000..0de5ba42811 --- /dev/null +++ b/nixos/modules/services/misc/freeswitch.nix @@ -0,0 +1,103 @@ +{ config, lib, pkgs, ...}: +with lib; +let + cfg = config.services.freeswitch; + pkg = cfg.package; + configDirectory = pkgs.runCommand "freeswitch-config-d" { } '' + mkdir -p $out + cp -rT ${cfg.configTemplate} $out + chmod -R +w $out + ${concatStringsSep "\n" (mapAttrsToList (fileName: filePath: '' + mkdir -p $out/$(dirname ${fileName}) + cp ${filePath} $out/${fileName} + '') cfg.configDir)} + ''; + configPath = if cfg.enableReload + then "/etc/freeswitch" + else configDirectory; +in { + options = { + services.freeswitch = { + enable = mkEnableOption "FreeSWITCH"; + enableReload = mkOption { + default = false; + type = types.bool; + description = '' + Issue the <literal>reloadxml</literal> command to FreeSWITCH when configuration directory changes (instead of restart). + See <link xlink:href="https://freeswitch.org/confluence/display/FREESWITCH/Reloading">FreeSWITCH documentation</link> for more info. + The configuration directory is exposed at <filename>/etc/freeswitch</filename>. + See also <literal>systemd.services.*.restartIfChanged</literal>. + ''; + }; + configTemplate = mkOption { + type = types.path; + default = "${config.services.freeswitch.package}/share/freeswitch/conf/vanilla"; + defaultText = literalExample "\${config.services.freeswitch.package}/share/freeswitch/conf/vanilla"; + example = literalExample "\${config.services.freeswitch.package}/share/freeswitch/conf/minimal"; + description = '' + Configuration template to use. + See available templates in <link xlink:href="https://github.com/signalwire/freeswitch/tree/master/conf">FreeSWITCH repository</link>. + You can also set your own configuration directory. + ''; + }; + configDir = mkOption { + type = with types; attrsOf path; + default = { }; + example = literalExample '' + { + "freeswitch.xml" = ./freeswitch.xml; + "dialplan/default.xml" = pkgs.writeText "dialplan-default.xml" ''' + [xml lines] + '''; + } + ''; + description = '' + Override file in FreeSWITCH config template directory. + Each top-level attribute denotes a file path in the configuration directory, its value is the file path. + See <link xlink:href="https://freeswitch.org/confluence/display/FREESWITCH/Default+Configuration">FreeSWITCH documentation</link> for more info. + Also check available templates in <link xlink:href="https://github.com/signalwire/freeswitch/tree/master/conf">FreeSWITCH repository</link>. + ''; + }; + package = mkOption { + type = types.package; + default = pkgs.freeswitch; + defaultText = literalExample "pkgs.freeswitch"; + example = literalExample "pkgs.freeswitch"; + description = '' + FreeSWITCH package. + ''; + }; + }; + }; + config = mkIf cfg.enable { + environment.etc.freeswitch = mkIf cfg.enableReload { + source = configDirectory; + }; + systemd.services.freeswitch-config-reload = mkIf cfg.enableReload { + before = [ "freeswitch.service" ]; + wantedBy = [ "multi-user.target" ]; + restartTriggers = [ configDirectory ]; + serviceConfig = { + ExecStart = "${pkgs.systemd}/bin/systemctl try-reload-or-restart freeswitch.service"; + RemainAfterExit = true; + Type = "oneshot"; + }; + }; + systemd.services.freeswitch = { + description = "Free and open-source application server for real-time communication"; + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + serviceConfig = { + DynamicUser = true; + StateDirectory = "freeswitch"; + ExecStart = "${pkg}/bin/freeswitch -nf \\ + -mod ${pkg}/lib/freeswitch/mod \\ + -conf ${configPath} \\ + -base /var/lib/freeswitch"; + ExecReload = "${pkg}/bin/fs_cli -x reloadxml"; + Restart = "always"; + RestartSec = "5s"; + }; + }; + }; +} diff --git a/nixos/modules/services/misc/home-assistant.nix b/nixos/modules/services/misc/home-assistant.nix index cc113ca2d0c..d63f38e93b8 100644 --- a/nixos/modules/services/misc/home-assistant.nix +++ b/nixos/modules/services/misc/home-assistant.nix @@ -251,6 +251,7 @@ in { home = cfg.configDir; createHome = true; group = "hass"; + extraGroups = [ "dialout" ]; uid = config.ids.uids.hass; }; diff --git a/nixos/modules/services/network-filesystems/kbfs.nix b/nixos/modules/services/network-filesystems/kbfs.nix index 263b70d04a5..a43ac656f66 100644 --- a/nixos/modules/services/network-filesystems/kbfs.nix +++ b/nixos/modules/services/network-filesystems/kbfs.nix @@ -1,6 +1,7 @@ { config, lib, pkgs, ... }: with lib; let + inherit (config.security) wrapperDir; cfg = config.services.kbfs; in { @@ -17,6 +18,16 @@ in { description = "Whether to mount the Keybase filesystem."; }; + enableRedirector = mkOption { + type = types.bool; + default = false; + description = '' + Whether to enable the Keybase root redirector service, allowing + any user to access KBFS files via <literal>/keybase</literal>, + which will show different contents depending on the requester. + ''; + }; + mountPoint = mkOption { type = types.str; default = "%h/keybase"; @@ -41,26 +52,67 @@ in { ###### implementation - config = mkIf cfg.enable { - - systemd.user.services.kbfs = { - description = "Keybase File System"; - requires = [ "keybase.service" ]; - after = [ "keybase.service" ]; - path = [ "/run/wrappers" ]; - unitConfig.ConditionUser = "!@system"; - serviceConfig = { - ExecStartPre = "${pkgs.coreutils}/bin/mkdir -p ${cfg.mountPoint}"; - ExecStart = "${pkgs.kbfs}/bin/kbfsfuse ${toString cfg.extraFlags} ${cfg.mountPoint}"; - ExecStopPost = "/run/wrappers/bin/fusermount -u ${cfg.mountPoint}"; - Restart = "on-failure"; - PrivateTmp = true; + config = mkIf cfg.enable (mkMerge [ + { + # Upstream: https://github.com/keybase/client/blob/master/packaging/linux/systemd/kbfs.service + systemd.user.services.kbfs = { + description = "Keybase File System"; + + # Note that the "Requires" directive will cause a unit to be restarted whenever its dependency is restarted. + # Do not issue a hard dependency on keybase, because kbfs can reconnect to a restarted service. + # Do not issue a hard dependency on keybase-redirector, because it's ok if it fails (e.g., if it is disabled). + wants = [ "keybase.service" ] ++ optional cfg.enableRedirector "keybase-redirector.service"; + path = [ "/run/wrappers" ]; + unitConfig.ConditionUser = "!@system"; + + serviceConfig = { + Type = "notify"; + # Keybase notifies from a forked process + EnvironmentFile = [ + "-%E/keybase/keybase.autogen.env" + "-%E/keybase/keybase.env" + ]; + ExecStartPre = [ + "${pkgs.coreutils}/bin/mkdir -p \"${cfg.mountPoint}\"" + "-${wrapperDir}/fusermount -uz \"${cfg.mountPoint}\"" + ]; + ExecStart = "${pkgs.kbfs}/bin/kbfsfuse ${toString cfg.extraFlags} \"${cfg.mountPoint}\""; + ExecStop = "${wrapperDir}/fusermount -uz \"${cfg.mountPoint}\""; + Restart = "on-failure"; + PrivateTmp = true; + }; + wantedBy = [ "default.target" ]; }; - wantedBy = [ "default.target" ]; - }; - services.keybase.enable = true; + services.keybase.enable = true; - environment.systemPackages = [ pkgs.kbfs ]; - }; + environment.systemPackages = [ pkgs.kbfs ]; + } + + (mkIf cfg.enableRedirector { + security.wrappers."keybase-redirector".source = "${pkgs.kbfs}/bin/redirector"; + + systemd.tmpfiles.rules = [ "d /keybase 0755 root root 0" ]; + + # Upstream: https://github.com/keybase/client/blob/master/packaging/linux/systemd/keybase-redirector.service + systemd.user.services.keybase-redirector = { + description = "Keybase Root Redirector for KBFS"; + wants = [ "keybase.service" ]; + unitConfig.ConditionUser = "!@system"; + + serviceConfig = { + EnvironmentFile = [ + "-%E/keybase/keybase.autogen.env" + "-%E/keybase/keybase.env" + ]; + # Note: The /keybase mount point is not currently configurable upstream. + ExecStart = "${wrapperDir}/keybase-redirector /keybase"; + Restart = "on-failure"; + PrivateTmp = true; + }; + + wantedBy = [ "default.target" ]; + }; + }) + ]); } diff --git a/nixos/modules/services/networking/dhcpcd.nix b/nixos/modules/services/networking/dhcpcd.nix index 6fbc014db71..6972c833cc5 100644 --- a/nixos/modules/services/networking/dhcpcd.nix +++ b/nixos/modules/services/networking/dhcpcd.nix @@ -59,6 +59,16 @@ let # Use the list of allowed interfaces if specified ${optionalString (allowInterfaces != null) "allowinterfaces ${toString allowInterfaces}"} + # Immediately fork to background if specified, otherwise wait for IP address to be assigned + ${{ + background = "background"; + any = "waitip"; + ipv4 = "waitip 4"; + ipv6 = "waitip 6"; + both = "waitip 4\nwaitip 6"; + if-carrier-up = ""; + }.${cfg.wait}} + ${cfg.extraConfig} ''; @@ -146,6 +156,21 @@ in ''; }; + networking.dhcpcd.wait = mkOption { + type = types.enum [ "background" "any" "ipv4" "ipv6" "both" "if-carrier-up" ]; + default = "any"; + description = '' + This option specifies when the dhcpcd service will fork to background. + If set to "background", dhcpcd will fork to background immediately. + If set to "ipv4" or "ipv6", dhcpcd will wait for the corresponding IP + address to be assigned. If set to "any", dhcpcd will wait for any type + (IPv4 or IPv6) to be assigned. If set to "both", dhcpcd will wait for + both an IPv4 and an IPv6 address before forking. + The option "if-carrier-up" is equivalent to "any" if either ethernet + is plugged nor WiFi is powered, and to "background" otherwise. + ''; + }; + }; @@ -177,7 +202,7 @@ in serviceConfig = { Type = "forking"; PIDFile = "/run/dhcpcd.pid"; - ExecStart = "@${dhcpcd}/sbin/dhcpcd dhcpcd -w --quiet ${optionalString cfg.persistent "--persistent"} --config ${dhcpcdConf}"; + ExecStart = "@${dhcpcd}/sbin/dhcpcd dhcpcd --quiet ${optionalString cfg.persistent "--persistent"} --config ${dhcpcdConf}"; ExecReload = "${dhcpcd}/sbin/dhcpcd --rebind"; Restart = "always"; }; diff --git a/nixos/modules/services/networking/keybase.nix b/nixos/modules/services/networking/keybase.nix index 85f52be8a6a..495102cb7ee 100644 --- a/nixos/modules/services/networking/keybase.nix +++ b/nixos/modules/services/networking/keybase.nix @@ -24,13 +24,18 @@ in { config = mkIf cfg.enable { + # Upstream: https://github.com/keybase/client/blob/master/packaging/linux/systemd/keybase.service systemd.user.services.keybase = { description = "Keybase service"; unitConfig.ConditionUser = "!@system"; + environment.KEYBASE_SERVICE_TYPE = "systemd"; serviceConfig = { - ExecStart = '' - ${pkgs.keybase}/bin/keybase service --auto-forked - ''; + Type = "notify"; + EnvironmentFile = [ + "-%E/keybase/keybase.autogen.env" + "-%E/keybase/keybase.env" + ]; + ExecStart = "${pkgs.keybase}/bin/keybase service"; Restart = "on-failure"; PrivateTmp = true; }; diff --git a/nixos/modules/services/networking/unifi.nix b/nixos/modules/services/networking/unifi.nix index c922ba15960..4bdfa8143dc 100644 --- a/nixos/modules/services/networking/unifi.nix +++ b/nixos/modules/services/networking/unifi.nix @@ -147,8 +147,10 @@ in }) mountPoints; systemd.tmpfiles.rules = [ - "e '${stateDir}' 0700 unifi - - -" + "d '${stateDir}' 0700 unifi - - -" "d '${stateDir}/data' 0700 unifi - - -" + "d '${stateDir}/webapps' 0700 unifi - - -" + "L+ '${stateDir}/webapps/ROOT' - - - - ${cfg.unifiPackage}/webapps/ROOT" ]; systemd.services.unifi = { @@ -161,17 +163,6 @@ in # This a HACK to fix missing dependencies of dynamic libs extracted from jars environment.LD_LIBRARY_PATH = with pkgs.stdenv; "${cc.cc.lib}/lib"; - preStart = '' - # Create the volatile webapps - rm -rf "${stateDir}/webapps" - mkdir -p "${stateDir}/webapps" - ln -s "${cfg.unifiPackage}/webapps/ROOT" "${stateDir}/webapps/ROOT" - ''; - - postStop = '' - rm -rf "${stateDir}/webapps" - ''; - serviceConfig = { Type = "simple"; ExecStart = "${(removeSuffix "\n" cmd)} start"; diff --git a/nixos/modules/services/security/bitwarden_rs/default.nix b/nixos/modules/services/security/bitwarden_rs/default.nix index d1817db0755..a63be0ee766 100644 --- a/nixos/modules/services/security/bitwarden_rs/default.nix +++ b/nixos/modules/services/security/bitwarden_rs/default.nix @@ -18,15 +18,33 @@ let else key + toUpper x) "" parts; in if builtins.match "[A-Z0-9_]+" name != null then name else partsToEnvVar parts; - configFile = pkgs.writeText "bitwarden_rs.env" (concatMapStrings (s: s + "\n") ( - (concatLists (mapAttrsToList (name: value: - if value != null then [ "${nameToEnvVar name}=${if isBool value then boolToString value else toString value}" ] else [] - ) cfg.config)))); + # Due to the different naming schemes allowed for config keys, + # we can only check for values consistently after converting them to their corresponding environment variable name. + configEnv = + let + configEnv = listToAttrs (concatLists (mapAttrsToList (name: value: + if value != null then [ (nameValuePair (nameToEnvVar name) (if isBool value then boolToString value else toString value)) ] else [] + ) cfg.config)); + in { DATA_FOLDER = "/var/lib/bitwarden_rs"; } // optionalAttrs (!(configEnv ? WEB_VAULT_ENABLED) || configEnv.WEB_VAULT_ENABLED == "true") { + WEB_VAULT_FOLDER = "${pkgs.bitwarden_rs-vault}/share/bitwarden_rs/vault"; + } // configEnv; + + configFile = pkgs.writeText "bitwarden_rs.env" (concatStrings (mapAttrsToList (name: value: "${name}=${value}\n") configEnv)); + + bitwarden_rs = pkgs.bitwarden_rs.override { inherit (cfg) dbBackend; }; in { options.services.bitwarden_rs = with types; { enable = mkEnableOption "bitwarden_rs"; + dbBackend = mkOption { + type = enum [ "sqlite" "mysql" "postgresql" ]; + default = "sqlite"; + description = '' + Which database backend bitwarden_rs will be using. + ''; + }; + backupDir = mkOption { type = nullOr str; default = null; @@ -56,23 +74,20 @@ in { even though foo2 would have been converted to FOO_2. This allows working around any potential future conflicting naming conventions. - Based on the attributes passed to this config option a environment file will be generated + Based on the attributes passed to this config option an environment file will be generated that is passed to bitwarden_rs's systemd service. The available configuration options can be found in - <link xlink:href="https://github.com/dani-garcia/bitwarden_rs/blob/1.8.0/.env.template">the environment template file</link>. + <link xlink:href="https://github.com/dani-garcia/bitwarden_rs/blob/${bitwarden_rs.version}/.env.template">the environment template file</link>. ''; - apply = config: optionalAttrs config.webVaultEnabled { - webVaultFolder = "${pkgs.bitwarden_rs-vault}/share/bitwarden_rs/vault"; - } // config; }; }; config = mkIf cfg.enable { - services.bitwarden_rs.config = { - dataFolder = "/var/lib/bitwarden_rs"; - webVaultEnabled = mkDefault true; - }; + assertions = [ { + assertion = cfg.backupDir != null -> cfg.dbBackend == "sqlite"; + message = "Backups for database backends other than sqlite will need customization"; + } ]; users.users.bitwarden_rs = { inherit group; @@ -87,7 +102,7 @@ in { User = user; Group = group; EnvironmentFile = configFile; - ExecStart = "${pkgs.bitwarden_rs}/bin/bitwarden_rs"; + ExecStart = "${bitwarden_rs}/bin/bitwarden_rs"; LimitNOFILE = "1048576"; LimitNPROC = "64"; PrivateTmp = "true"; @@ -109,6 +124,7 @@ in { path = with pkgs; [ sqlite ]; serviceConfig = { SyslogIdentifier = "backup-bitwarden_rs"; + Type = "oneshot"; User = mkDefault user; Group = mkDefault group; ExecStart = "${pkgs.bash}/bin/bash ${./backup.sh}"; diff --git a/nixos/modules/services/web-servers/apache-httpd/default.nix b/nixos/modules/services/web-servers/apache-httpd/default.nix index fd17e4b54f0..9942c63acce 100644 --- a/nixos/modules/services/web-servers/apache-httpd/default.nix +++ b/nixos/modules/services/web-servers/apache-httpd/default.nix @@ -179,6 +179,28 @@ let then hostOpts.documentRoot else pkgs.runCommand "empty" { preferLocalBuild = true; } "mkdir -p $out" ; + + mkLocations = locations: concatStringsSep "\n" (map (config: '' + <Location ${config.location}> + ${optionalString (config.proxyPass != null) '' + <IfModule mod_proxy.c> + ProxyPass ${config.proxyPass} + ProxyPassReverse ${config.proxyPass} + </IfModule> + ''} + ${optionalString (config.index != null) '' + <IfModule mod_dir.c> + DirectoryIndex ${config.index} + </IfModule> + ''} + ${optionalString (config.alias != null) '' + <IfModule mod_alias.c> + Alias "${config.alias}" + </IfModule> + ''} + ${config.extraConfig} + </Location> + '') (sortProperties (mapAttrsToList (k: v: v // { location = k; }) locations))); in '' ${optionalString mainCfg.logPerVirtualHost '' @@ -218,12 +240,6 @@ let ''} ${ - let makeFileConf = elem: '' - Alias ${elem.urlPath} ${elem.file} - ''; - in concatMapStrings makeFileConf hostOpts.servedFiles - } - ${ let makeDirConf = elem: '' Alias ${elem.urlPath} ${elem.dir}/ <Directory ${elem.dir}> @@ -235,6 +251,7 @@ let in concatMapStrings makeDirConf hostOpts.servedDirs } + ${mkLocations hostOpts.locations} ${hostOpts.extraConfig} '' ; @@ -606,6 +623,11 @@ in } ]; + warnings = + mapAttrsToList (name: hostOpts: '' + Using config.services.httpd.virtualHosts."${name}".servedFiles is deprecated and will become unsupported in a future release. Your configuration will continue to work as is but please migrate your configuration to config.services.httpd.virtualHosts."${name}".locations before the 20.09 release of NixOS. + '') (filterAttrs (name: hostOpts: hostOpts.servedFiles != []) mainCfg.virtualHosts); + users.users = optionalAttrs (mainCfg.user == "wwwrun") { wwwrun = { group = mainCfg.group; diff --git a/nixos/modules/services/web-servers/apache-httpd/location-options.nix b/nixos/modules/services/web-servers/apache-httpd/location-options.nix new file mode 100644 index 00000000000..8ea88f94f97 --- /dev/null +++ b/nixos/modules/services/web-servers/apache-httpd/location-options.nix @@ -0,0 +1,54 @@ +{ config, lib, name, ... }: +let + inherit (lib) mkOption types; +in +{ + options = { + + proxyPass = mkOption { + type = with types; nullOr str; + default = null; + example = "http://www.example.org/"; + description = '' + Sets up a simple reverse proxy as described by <link xlink:href="https://httpd.apache.org/docs/2.4/howto/reverse_proxy.html#simple" />. + ''; + }; + + index = mkOption { + type = with types; nullOr str; + default = null; + example = "index.php index.html"; + description = '' + Adds DirectoryIndex directive. See <link xlink:href="https://httpd.apache.org/docs/2.4/mod/mod_dir.html#directoryindex" />. + ''; + }; + + alias = mkOption { + type = with types; nullOr path; + default = null; + example = "/your/alias/directory"; + description = '' + Alias directory for requests. See <link xlink:href="https://httpd.apache.org/docs/2.4/mod/mod_alias.html#alias" />. + ''; + }; + + extraConfig = mkOption { + type = types.lines; + default = ""; + description = '' + These lines go to the end of the location verbatim. + ''; + }; + + priority = mkOption { + type = types.int; + default = 1000; + description = '' + Order of this location block in relation to the others in the vhost. + The semantics are the same as with `lib.mkOrder`. Smaller values have + a greater priority. + ''; + }; + + }; +} diff --git a/nixos/modules/services/web-servers/apache-httpd/per-server-options.nix b/nixos/modules/services/web-servers/apache-httpd/per-server-options.nix index f2e92cda05f..f34f8b4acdf 100644 --- a/nixos/modules/services/web-servers/apache-httpd/per-server-options.nix +++ b/nixos/modules/services/web-servers/apache-httpd/per-server-options.nix @@ -1,6 +1,6 @@ { config, lib, name, ... }: let - inherit (lib) mkOption types; + inherit (lib) literalExample mkOption nameValuePair types; in { options = { @@ -175,6 +175,12 @@ in ]; description = '' This option provides a simple way to serve individual, static files. + + <note><para> + This option has been deprecated and will be removed in a future + version of NixOS. You can achieve the same result by making use of + the <literal>locations.<name>.alias</literal> option. + </para></note> ''; }; @@ -231,5 +237,30 @@ in ''; }; + locations = mkOption { + type = with types; attrsOf (submodule (import ./location-options.nix)); + default = {}; + example = literalExample '' + { + "/" = { + proxyPass = "http://localhost:3000"; + }; + "/foo/bar.png" = { + alias = "/home/eelco/some-file.png"; + }; + }; + ''; + description = '' + Declarative location config. See <link + xlink:href="https://httpd.apache.org/docs/2.4/mod/core.html#location"/> for details. + ''; + }; + + }; + + config = { + + locations = builtins.listToAttrs (map (elem: nameValuePair elem.urlPath { alias = elem.file; }) config.servedFiles); + }; } diff --git a/nixos/modules/services/x11/desktop-managers/gnome3.nix b/nixos/modules/services/x11/desktop-managers/gnome3.nix index ba9906072b3..5756cf14ed9 100644 --- a/nixos/modules/services/x11/desktop-managers/gnome3.nix +++ b/nixos/modules/services/x11/desktop-managers/gnome3.nix @@ -334,7 +334,6 @@ in cheese eog epiphany - geary gedit gnome-calculator gnome-calendar @@ -361,6 +360,7 @@ in # Enable default programs programs.evince.enable = mkDefault true; programs.file-roller.enable = mkDefault true; + programs.geary.enable = mkDefault true; programs.gnome-disks.enable = mkDefault true; programs.gnome-terminal.enable = mkDefault true; programs.seahorse.enable = mkDefault true; diff --git a/nixos/modules/services/x11/xserver.nix b/nixos/modules/services/x11/xserver.nix index 7029919170a..7f0de96d208 100644 --- a/nixos/modules/services/x11/xserver.nix +++ b/nixos/modules/services/x11/xserver.nix @@ -556,8 +556,7 @@ in services.xserver.displayManager.lightdm.enable = let dmconf = cfg.displayManager; - default = !( dmconf.auto.enable - || dmconf.gdm.enable + default = !(dmconf.gdm.enable || dmconf.sddm.enable || dmconf.xpra.enable ); in mkIf (default) true; diff --git a/nixos/modules/virtualisation/lxd.nix b/nixos/modules/virtualisation/lxd.nix index b4934a86cf5..de48d3a780e 100644 --- a/nixos/modules/virtualisation/lxd.nix +++ b/nixos/modules/virtualisation/lxd.nix @@ -7,6 +7,7 @@ with lib; let cfg = config.virtualisation.lxd; + zfsCfg = config.boot.zfs; in @@ -26,11 +27,40 @@ in <command>lxc</command> command line tool, among others. ''; }; + + package = mkOption { + type = types.package; + default = pkgs.lxd; + defaultText = "pkgs.lxd"; + description = '' + The LXD package to use. + ''; + }; + + lxcPackage = mkOption { + type = types.package; + default = pkgs.lxc; + defaultText = "pkgs.lxc"; + description = '' + The LXC package to use with LXD (required for AppArmor profiles). + ''; + }; + + zfsPackage = mkOption { + type = types.package; + default = with pkgs; if zfsCfg.enableUnstable then zfsUnstable else zfs; + defaultText = "pkgs.zfs"; + description = '' + The ZFS package to use with LXD. + ''; + }; + zfsSupport = mkOption { type = types.bool; default = false; description = '' - enables lxd to use zfs as a storage for containers. + Enables lxd to use zfs as a storage for containers. + This option is enabled by default if a zfs pool is configured with nixos. ''; @@ -54,15 +84,15 @@ in config = mkIf cfg.enable { - environment.systemPackages = [ pkgs.lxd ]; + environment.systemPackages = [ cfg.package ]; security.apparmor = { enable = true; profiles = [ - "${pkgs.lxc}/etc/apparmor.d/usr.bin.lxc-start" - "${pkgs.lxc}/etc/apparmor.d/lxc-containers" + "${cfg.lxcPackage}/etc/apparmor.d/usr.bin.lxc-start" + "${cfg.lxcPackage}/etc/apparmor.d/lxc-containers" ]; - packages = [ pkgs.lxc ]; + packages = [ cfg.lxcPackage ]; }; systemd.services.lxd = { @@ -71,14 +101,14 @@ in wantedBy = [ "multi-user.target" ]; after = [ "systemd-udev-settle.service" ]; - path = lib.optional cfg.zfsSupport pkgs.zfs; + path = lib.optional cfg.zfsSupport cfg.zfsPackage; preStart = '' mkdir -m 0755 -p /var/lib/lxc/rootfs ''; serviceConfig = { - ExecStart = "@${pkgs.lxd.bin}/bin/lxd lxd --group lxd"; + ExecStart = "@${cfg.package.bin}/bin/lxd lxd --group lxd"; Type = "simple"; KillMode = "process"; # when stopping, leave the containers alone LimitMEMLOCK = "infinity"; diff --git a/nixos/tests/all-tests.nix b/nixos/tests/all-tests.nix index 8c11464f9d6..2f26bb782c9 100644 --- a/nixos/tests/all-tests.nix +++ b/nixos/tests/all-tests.nix @@ -94,6 +94,7 @@ in flannel = handleTestOn ["x86_64-linux"] ./flannel.nix {}; fluentd = handleTest ./fluentd.nix {}; fontconfig-default-fonts = handleTest ./fontconfig-default-fonts.nix {}; + freeswitch = handleTest ./freeswitch.nix {}; fsck = handleTest ./fsck.nix {}; gotify-server = handleTest ./gotify-server.nix {}; gitea = handleTest ./gitea.nix {}; @@ -293,6 +294,7 @@ in upnp = handleTest ./upnp.nix {}; uwsgi = handleTest ./uwsgi.nix {}; vault = handleTest ./vault.nix {}; + victoriametrics = handleTest ./victoriametrics.nix {}; virtualbox = handleTestOn ["x86_64-linux"] ./virtualbox.nix {}; wireguard = handleTest ./wireguard {}; wireguard-generated = handleTest ./wireguard/generated.nix {}; diff --git a/nixos/tests/chromium.nix b/nixos/tests/chromium.nix index a5531d112e3..3844255bd8a 100644 --- a/nixos/tests/chromium.nix +++ b/nixos/tests/chromium.nix @@ -23,7 +23,7 @@ mapAttrs (channel: chromiumPkg: makeTest rec { machine.imports = [ ./common/user-account.nix ./common/x11.nix ]; machine.virtualisation.memorySize = 2047; - machine.services.xserver.displayManager.auto.user = "alice"; + machine.test-support.displayManager.auto.user = "alice"; machine.environment.systemPackages = [ chromiumPkg ]; startupHTML = pkgs.writeText "chromium-startup.html" '' diff --git a/nixos/modules/services/x11/display-managers/auto.nix b/nixos/tests/common/auto.nix index 1068a344e0c..2c21a8d5167 100644 --- a/nixos/modules/services/x11/display-managers/auto.nix +++ b/nixos/tests/common/auto.nix @@ -5,7 +5,7 @@ with lib; let dmcfg = config.services.xserver.displayManager; - cfg = dmcfg.auto; + cfg = config.test-support.displayManager.auto; in @@ -15,7 +15,7 @@ in options = { - services.xserver.displayManager.auto = { + test-support.displayManager.auto = { enable = mkOption { default = false; diff --git a/nixos/tests/common/x11.nix b/nixos/tests/common/x11.nix index 5ad0ac20fac..0d76a0e972f 100644 --- a/nixos/tests/common/x11.nix +++ b/nixos/tests/common/x11.nix @@ -1,9 +1,14 @@ { lib, ... }: -{ services.xserver.enable = true; +{ + imports = [ + ./auto.nix + ]; + + services.xserver.enable = true; # Automatically log in. - services.xserver.displayManager.auto.enable = true; + test-support.displayManager.auto.enable = true; # Use IceWM as the window manager. # Don't use a desktop manager. diff --git a/nixos/tests/freeswitch.nix b/nixos/tests/freeswitch.nix new file mode 100644 index 00000000000..349d0e7bc6f --- /dev/null +++ b/nixos/tests/freeswitch.nix @@ -0,0 +1,29 @@ +import ./make-test-python.nix ({ pkgs, ...} : { + name = "freeswitch"; + meta = with pkgs.stdenv.lib.maintainers; { + maintainers = [ misuzu ]; + }; + nodes = { + node0 = { config, lib, ... }: { + networking.useDHCP = false; + networking.interfaces.eth1 = { + ipv4.addresses = [ + { + address = "192.168.0.1"; + prefixLength = 24; + } + ]; + }; + services.freeswitch = { + enable = true; + enableReload = true; + configTemplate = "${config.services.freeswitch.package}/share/freeswitch/conf/minimal"; + }; + }; + }; + testScript = '' + node0.wait_for_unit("freeswitch.service") + # Wait for SIP port to be open + node0.wait_for_open_port("5060") + ''; +}) diff --git a/nixos/tests/i3wm.nix b/nixos/tests/i3wm.nix index 126178d1187..b527aa706ad 100644 --- a/nixos/tests/i3wm.nix +++ b/nixos/tests/i3wm.nix @@ -6,7 +6,7 @@ import ./make-test-python.nix ({ pkgs, ...} : { machine = { lib, ... }: { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; services.xserver.displayManager.defaultSession = lib.mkForce "none+i3"; services.xserver.windowManager.i3.enable = true; }; diff --git a/nixos/tests/signal-desktop.nix b/nixos/tests/signal-desktop.nix index c746d46dc55..ae141fe116d 100644 --- a/nixos/tests/signal-desktop.nix +++ b/nixos/tests/signal-desktop.nix @@ -15,7 +15,7 @@ import ./make-test-python.nix ({ pkgs, ...} : ]; services.xserver.enable = true; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; environment.systemPackages = [ pkgs.signal-desktop ]; }; diff --git a/nixos/tests/systemd.nix b/nixos/tests/systemd.nix index 4b71b4d6759..8028145939b 100644 --- a/nixos/tests/systemd.nix +++ b/nixos/tests/systemd.nix @@ -1,4 +1,4 @@ -import ./make-test.nix ({ pkgs, ... }: { +import ./make-test-python.nix ({ pkgs, ... }: { name = "systemd"; machine = { lib, ... }: { @@ -19,7 +19,7 @@ import ./make-test.nix ({ pkgs, ... }: { systemd.extraConfig = "DefaultEnvironment=\"XXX_SYSTEM=foo\""; systemd.user.extraConfig = "DefaultEnvironment=\"XXX_USER=bar\""; services.journald.extraConfig = "Storage=volatile"; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; systemd.shutdown.test = pkgs.writeScript "test.shutdown" '' #!${pkgs.stdenv.shell} @@ -53,50 +53,69 @@ import ./make-test.nix ({ pkgs, ... }: { }; testScript = '' - $machine->waitForX; + import re + import subprocess + + machine.wait_for_x() # wait for user services - $machine->waitForUnit("default.target","alice"); + machine.wait_for_unit("default.target", "alice") # Regression test for https://github.com/NixOS/nixpkgs/issues/35415 - subtest "configuration files are recognized by systemd", sub { - $machine->succeed('test -e /system_conf_read'); - $machine->succeed('test -e /home/alice/user_conf_read'); - $machine->succeed('test -z $(ls -1 /var/log/journal)'); - }; + with subtest("configuration files are recognized by systemd"): + machine.succeed("test -e /system_conf_read") + machine.succeed("test -e /home/alice/user_conf_read") + machine.succeed("test -z $(ls -1 /var/log/journal)") # Regression test for https://github.com/NixOS/nixpkgs/issues/50273 - subtest "DynamicUser actually allocates a user", sub { - $machine->succeed('systemd-run --pty --property=Type=oneshot --property=DynamicUser=yes --property=User=iamatest whoami | grep iamatest'); - }; + with subtest("DynamicUser actually allocates a user"): + assert "iamatest" in machine.succeed( + "systemd-run --pty --property=Type=oneshot --property=DynamicUser=yes --property=User=iamatest whoami" + ) # Regression test for https://github.com/NixOS/nixpkgs/issues/35268 - subtest "file system with x-initrd.mount is not unmounted", sub { - $machine->succeed('mountpoint -q /test-x-initrd-mount'); - $machine->shutdown; - system('qemu-img', 'convert', '-O', 'raw', - 'vm-state-machine/empty2.qcow2', 'x-initrd-mount.raw'); - my $extinfo = `${pkgs.e2fsprogs}/bin/dumpe2fs x-initrd-mount.raw`; - die "File system was not cleanly unmounted: $extinfo" - unless $extinfo =~ /^Filesystem state: *clean$/m; - }; + with subtest("file system with x-initrd.mount is not unmounted"): + machine.succeed("mountpoint -q /test-x-initrd-mount") + machine.shutdown() - subtest "systemd-shutdown works", sub { - $machine->shutdown; - $machine->waitForUnit('multi-user.target'); - $machine->succeed('test -e /tmp/shared/shutdown-test'); - }; + subprocess.check_call( + [ + "qemu-img", + "convert", + "-O", + "raw", + "vm-state-machine/empty0.qcow2", + "x-initrd-mount.raw", + ] + ) + extinfo = subprocess.check_output( + [ + "${pkgs.e2fsprogs}/bin/dumpe2fs", + "x-initrd-mount.raw", + ] + ).decode("utf-8") + assert ( + re.search(r"^Filesystem state: *clean$", extinfo, re.MULTILINE) is not None + ), ("File system was not cleanly unmounted: " + extinfo) + + with subtest("systemd-shutdown works"): + machine.shutdown() + machine.wait_for_unit("multi-user.target") + machine.succeed("test -e /tmp/shared/shutdown-test") + + # Test settings from /etc/sysctl.d/50-default.conf are applied + with subtest("systemd sysctl settings are applied"): + machine.wait_for_unit("multi-user.target") + assert "fq_codel" in machine.succeed("sysctl net.core.default_qdisc") + + # Test cgroup accounting is enabled + with subtest("systemd cgroup accounting is enabled"): + machine.wait_for_unit("multi-user.target") + assert "yes" in machine.succeed( + "systemctl show testservice1.service -p IOAccounting" + ) - # Test settings from /etc/sysctl.d/50-default.conf are applied - subtest "systemd sysctl settings are applied", sub { - $machine->waitForUnit('multi-user.target'); - $machine->succeed('sysctl net.core.default_qdisc | grep -q "fq_codel"'); - }; - - # Test cgroup accounting is enabled - subtest "systemd cgroup accounting is enabled", sub { - $machine->waitForUnit('multi-user.target'); - $machine->succeed('systemctl show testservice1.service -p IOAccounting | grep -q "yes"'); - $machine->succeed('systemctl status testservice1.service | grep -q "CPU:"'); - }; + retcode, output = machine.execute("systemctl status testservice1.service") + assert retcode in [0, 3] # https://bugs.freedesktop.org/show_bug.cgi?id=77507 + assert "CPU:" in output ''; }) diff --git a/nixos/tests/victoriametrics.nix b/nixos/tests/victoriametrics.nix new file mode 100644 index 00000000000..73ef8b72861 --- /dev/null +++ b/nixos/tests/victoriametrics.nix @@ -0,0 +1,31 @@ +# This test runs influxdb and checks if influxdb is up and running + +import ./make-test-python.nix ({ pkgs, ...} : { + name = "victoriametrics"; + meta = with pkgs.stdenv.lib.maintainers; { + maintainers = [ yorickvp ]; + }; + + nodes = { + one = { ... }: { + services.victoriametrics.enable = true; + }; + }; + + testScript = '' + start_all() + + one.wait_for_unit("victoriametrics.service") + + # write some points and run simple query + out = one.succeed( + "curl -d 'measurement,tag1=value1,tag2=value2 field1=123,field2=1.23' -X POST 'http://localhost:8428/write'" + ) + cmd = """curl -s -G 'http://localhost:8428/api/v1/export' -d 'match={__name__!=""}'""" + # data takes a while to appear + one.wait_until_succeeds(f"[[ $({cmd} | wc -l) -ne 0 ]]") + out = one.succeed(cmd) + assert '"values":[123]' in out + assert '"values":[1.23]' in out + ''; +}) diff --git a/nixos/tests/virtualbox.nix b/nixos/tests/virtualbox.nix index 32637d2c1ef..f03dc1cc413 100644 --- a/nixos/tests/virtualbox.nix +++ b/nixos/tests/virtualbox.nix @@ -356,7 +356,7 @@ let virtualisation.qemu.options = if useKvmNestedVirt then ["-cpu" "kvm64,vmx=on"] else []; virtualisation.virtualbox.host.enable = true; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; users.users.alice.extraGroups = let inherit (config.virtualisation.virtualbox.host) enableHardening; in lib.mkIf enableHardening (lib.singleton "vboxusers"); diff --git a/nixos/tests/xautolock.nix b/nixos/tests/xautolock.nix index 10e92b40e95..4a8d3f4cebf 100644 --- a/nixos/tests/xautolock.nix +++ b/nixos/tests/xautolock.nix @@ -9,7 +9,7 @@ with lib; nodes.machine = { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "bob"; + test-support.displayManager.auto.user = "bob"; services.xserver.xautolock.enable = true; services.xserver.xautolock.time = 1; }; diff --git a/nixos/tests/xfce.nix b/nixos/tests/xfce.nix index 3ea96b38363..99065669661 100644 --- a/nixos/tests/xfce.nix +++ b/nixos/tests/xfce.nix @@ -4,12 +4,20 @@ import ./make-test-python.nix ({ pkgs, ...} : { machine = { pkgs, ... }: - { imports = [ ./common/user-account.nix ]; + { + imports = [ + ./common/user-account.nix + ]; services.xserver.enable = true; - services.xserver.displayManager.auto.enable = true; - services.xserver.displayManager.auto.user = "alice"; + services.xserver.displayManager.lightdm = { + enable = true; + autoLogin = { + enable = true; + user = "alice"; + }; + }; services.xserver.desktopManager.xfce.enable = true; diff --git a/nixos/tests/xmonad.nix b/nixos/tests/xmonad.nix index ef711f8dcf6..56baae8b9d3 100644 --- a/nixos/tests/xmonad.nix +++ b/nixos/tests/xmonad.nix @@ -6,7 +6,7 @@ import ./make-test-python.nix ({ pkgs, ...} : { machine = { pkgs, ... }: { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; services.xserver.displayManager.defaultSession = "none+xmonad"; services.xserver.windowManager.xmonad = { enable = true; diff --git a/nixos/tests/xrdp.nix b/nixos/tests/xrdp.nix index 1aceeffb955..6d7f2b9249f 100644 --- a/nixos/tests/xrdp.nix +++ b/nixos/tests/xrdp.nix @@ -14,7 +14,7 @@ import ./make-test-python.nix ({ pkgs, ...} : { client = { pkgs, ... }: { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; environment.systemPackages = [ pkgs.freerdp ]; services.xrdp.enable = true; services.xrdp.defaultWindowManager = "${pkgs.icewm}/bin/icewm"; diff --git a/nixos/tests/xss-lock.nix b/nixos/tests/xss-lock.nix index 3a7dea07d53..b77bbbbb3c4 100644 --- a/nixos/tests/xss-lock.nix +++ b/nixos/tests/xss-lock.nix @@ -10,12 +10,12 @@ with lib; simple = { imports = [ ./common/x11.nix ./common/user-account.nix ]; programs.xss-lock.enable = true; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; }; custom_lockcmd = { pkgs, ... }: { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "alice"; + test-support.displayManager.auto.user = "alice"; programs.xss-lock = { enable = true; diff --git a/nixos/tests/yabar.nix b/nixos/tests/yabar.nix index 9108004d4df..b374ef29680 100644 --- a/nixos/tests/yabar.nix +++ b/nixos/tests/yabar.nix @@ -11,7 +11,7 @@ with lib; machine = { imports = [ ./common/x11.nix ./common/user-account.nix ]; - services.xserver.displayManager.auto.user = "bob"; + test-support.displayManager.auto.user = "bob"; programs.yabar.enable = true; programs.yabar.bars = { diff --git a/pkgs/applications/audio/gnaural/default.nix b/pkgs/applications/audio/gnaural/default.nix deleted file mode 100644 index f5887e870db..00000000000 --- a/pkgs/applications/audio/gnaural/default.nix +++ /dev/null @@ -1,19 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, gtk2, libsndfile, portaudio }: - -stdenv.mkDerivation rec { - name = "gnaural-1.0.20110606"; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gtk2 libsndfile portaudio ]; - src = fetchurl { - url = "mirror://sourceforge/gnaural/Gnaural/${name}.tar.gz"; - sha256 = "0p9rasz1jmxf16vnpj17g3vzdjygcyz3l6nmbq6wr402l61f1vy5"; - }; - meta = with stdenv.lib; - { description = "Auditory binaural-beat generator"; - homepage = http://gnaural.sourceforge.net/; - license = licenses.gpl2; - maintainers = [ maintainers.ehmry ]; - platforms = platforms.linux; - broken = true; - }; -} diff --git a/pkgs/applications/audio/gpodder/default.nix b/pkgs/applications/audio/gpodder/default.nix index b972aae7de8..1d6bc33cc55 100644 --- a/pkgs/applications/audio/gpodder/default.nix +++ b/pkgs/applications/audio/gpodder/default.nix @@ -5,14 +5,14 @@ python3Packages.buildPythonApplication rec { pname = "gpodder"; - version = "3.10.11"; + version = "3.10.12"; format = "other"; src = fetchFromGitHub { owner = pname; repo = pname; rev = version; - sha256 = "15f5z3cnch9lpzbz73l4wjykv9n74y8djz5db53la2ql4ihaxfz9"; + sha256 = "0q95am079gg01dkivr972mm2k87y8z296a9yf7amzsf9hxfycdra"; }; patches = [ diff --git a/pkgs/applications/audio/muse/default.nix b/pkgs/applications/audio/muse/default.nix index 372c8faf773..f1fad05bece 100644 --- a/pkgs/applications/audio/muse/default.nix +++ b/pkgs/applications/audio/muse/default.nix @@ -1,7 +1,9 @@ { stdenv , fetchFromGitHub , libjack2 -, qt5 +, wrapQtAppsHook +, qtsvg +, qttools , cmake , libsndfile , libsamplerate @@ -13,7 +15,6 @@ , dssi , liblo , pkgconfig -, gitAndTools }: stdenv.mkDerivation { @@ -45,14 +46,14 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig - gitAndTools.gitFull + wrapQtAppsHook + qttools + cmake ]; buildInputs = [ libjack2 - qt5.qtsvg - qt5.qttools - cmake + qtsvg libsndfile libsamplerate ladspaH @@ -65,15 +66,4 @@ stdenv.mkDerivation { ]; sourceRoot = "source/muse3"; - - buildPhase = '' - cd .. - bash compile_muse.sh - ''; - - installPhase = '' - mkdir $out - cd build - make install - ''; } diff --git a/pkgs/applications/audio/ncmpc/default.nix b/pkgs/applications/audio/ncmpc/default.nix index 58eb5462ef8..c95177cd382 100644 --- a/pkgs/applications/audio/ncmpc/default.nix +++ b/pkgs/applications/audio/ncmpc/default.nix @@ -10,13 +10,13 @@ assert pcreSupport -> pcre != null; stdenv.mkDerivation rec { pname = "ncmpc"; - version = "0.36"; + version = "0.37"; src = fetchFromGitHub { owner = "MusicPlayerDaemon"; repo = "ncmpc"; rev = "v${version}"; - sha256 = "1ssmk1p43gjhcqi86sh6b7csqpwwpf3hs32cmnylv6pmbcwbs69h"; + sha256 = "1b0vd0h49kjg4nxjfjrcg8gzplz93ryr6xyfha2pvhlrzdd2d1lj"; }; buildInputs = [ glib ncurses mpd_clientlib boost ] diff --git a/pkgs/applications/editors/hexdino/default.nix b/pkgs/applications/editors/hexdino/default.nix index ef3635aa8d2..eee5a696555 100644 --- a/pkgs/applications/editors/hexdino/default.nix +++ b/pkgs/applications/editors/hexdino/default.nix @@ -1,6 +1,7 @@ { stdenv, fetchFromGitHub, rustPlatform, ncurses }: -rustPlatform.buildRustPackage rec { - name = "hexdino-${version}"; + +rustPlatform.buildRustPackage { + pname = "hexdino"; version = "0.1.0"; src = fetchFromGitHub { diff --git a/pkgs/applications/networking/browsers/chromium/browser.nix b/pkgs/applications/networking/browsers/chromium/browser.nix index b8160a682e6..ec69f3d233f 100644 --- a/pkgs/applications/networking/browsers/chromium/browser.nix +++ b/pkgs/applications/networking/browsers/chromium/browser.nix @@ -60,8 +60,22 @@ mkChromiumDerivation (base: rec { meta = { description = "An open source web browser from Google"; - homepage = http://www.chromium.org/; - maintainers = with maintainers; [ bendlas thefloweringash ]; + longDescription = '' + Chromium is an open source web browser from Google that aims to build a + safer, faster, and more stable way for all Internet users to experience + the web. It has a minimalist user interface and provides the vast majority + of source code for Google Chrome (which has some additional features). + ''; + homepage = https://www.chromium.org/; + maintainers = with maintainers; [ bendlas thefloweringash primeos ]; + # Overview of the maintainer roles: + # nixos-unstable: + # - TODO: Need a new maintainer for x86_64 [0] + # - @thefloweringash: aarch64 + # - @primeos: Provisional maintainer (x86_64) + # Stable channel: + # - TODO (need someone to test backports [0]) + # [0]: https://github.com/NixOS/nixpkgs/issues/78450 license = if enableWideVine then licenses.unfree else licenses.bsd3; platforms = platforms.linux; hydraPlatforms = if channel == "stable" then ["aarch64-linux" "x86_64-linux"] else []; diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix index 85f3aa824c3..73163c82ea7 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix @@ -1,18 +1,18 @@ # This file is autogenerated from update.sh in the same directory. { beta = { - sha256 = "1fbs6llrhm9jkzmk3v3a84d9is6g96kysy91hvpb0bw8f7anl969"; - sha256bin64 = "026gb4ypgidywvs4a031d0alv6fdphmlfybvgir4a73z8q263s26"; - version = "80.0.3987.16"; + sha256 = "07h3znqb1r8hgcxzm5f04xkj2r66s1rhixqyyxi4hadf7qjx02n7"; + sha256bin64 = "0r7706gxdqws8dm5859869p5h8gas6f65qz674rk18l8dbg40fzw"; + version = "80.0.3987.66"; }; dev = { - sha256 = "1bczkk2q4fk1vgx34d9qgzqz7gsf89h6gd16apwcy6063lmrsizz"; - sha256bin64 = "1ywi3x7rc4vwsg20lci37bw97873j3vvbxxv7m2nlh4nqcs5655q"; - version = "81.0.4000.3"; + sha256 = "1sm1ndq4y2d4fs4y9d5k4dcs6q2pqilv7b0ffx2nlazdrr73la3n"; + sha256bin64 = "0kr49hvk0c6pmxpm94fscxvdd6whxz1x7ic27xk86csjpjz6s5dg"; + version = "81.0.4033.2"; }; stable = { - sha256 = "1wafhpnaqwmmks4rs6x9m2b4jz4m4h27jch6gy71rk4hsy5hx5jd"; - sha256bin64 = "1dl43a94xd7vkx8mnp3ccgq18y624fffcfnfjhxgfc02c0c6an9l"; - version = "79.0.3945.117"; + sha256 = "183vz3lf1588cr9s5vlnj65qvbmz36s8cg8k7dvr64cxmcqk86an"; + sha256bin64 = "1550fs4n3lgvb80hij2yq13zkw0bjih210ylpd74n1mw9yw4ygk1"; + version = "79.0.3945.130"; }; } diff --git a/pkgs/applications/networking/cluster/kops/default.nix b/pkgs/applications/networking/cluster/kops/default.nix index 267f25f8bb5..e3b82152e6f 100644 --- a/pkgs/applications/networking/cluster/kops/default.nix +++ b/pkgs/applications/networking/cluster/kops/default.nix @@ -67,7 +67,7 @@ in rec { }; kops_1_15 = mkKops { - version = "1.15.0"; - sha256 = "0sjas8pn0njl767b1y15g7cci2q3kxkxwmgr0wvs7vi3n1s1sf9d"; + version = "1.15.1"; + sha256 = "0iq2bqq6zv6sk2psar33c3smnz79rk5v623qx4kr5h47wnqvrfvj"; }; } diff --git a/pkgs/applications/networking/instant-messengers/dino/default.nix b/pkgs/applications/networking/instant-messengers/dino/default.nix index 5a133dec83d..8928814e967 100644 --- a/pkgs/applications/networking/instant-messengers/dino/default.nix +++ b/pkgs/applications/networking/instant-messengers/dino/default.nix @@ -2,7 +2,8 @@ , vala, cmake, ninja, wrapGAppsHook, pkgconfig, gettext , gobject-introspection, gnome3, glib, gdk-pixbuf, gtk3, glib-networking , xorg, libXdmcp, libxkbcommon -, libnotify, libsoup, libgee +, libnotify, libsoup, libgee, utillinux, libselinux, libsepol, libpsl, brotli +, librsvg, libsignal-protocol-c , libgcrypt , epoxy , at-spi2-core @@ -14,15 +15,15 @@ , icu }: -stdenv.mkDerivation { - name = "dino-unstable-2019-10-28"; +stdenv.mkDerivation rec { + pname = "dino"; + version = "0.1.0"; src = fetchFromGitHub { owner = "dino"; repo = "dino"; - rev = "388cc56674487e7b9e339637369fc55f0e271daf"; - sha256 = "1v8rnjbzi8qhwb1fv787byxk8ygfs16z2j64h0s6sd3asr4n0kz1"; - fetchSubmodules = true; + rev = "v${version}"; + sha256 = "1k5cgj5n8s40i71wqdh6m1q0njl45ichfdbbywx9rga5hljz1c54"; }; nativeBuildInputs = [ @@ -51,21 +52,27 @@ stdenv.mkDerivation { pcre xorg.libxcb xorg.libpthreadstubs + xorg.libXtst libXdmcp libxkbcommon epoxy at-spi2-core dbus icu + utillinux + libselinux + libsepol + libpsl + brotli + libsignal-protocol-c + librsvg ]; - enableParallelBuilding = true; - meta = with stdenv.lib; { description = "Modern Jabber/XMPP Client using GTK/Vala"; homepage = https://github.com/dino/dino; license = licenses.gpl3; platforms = platforms.linux; - maintainers = [ maintainers.mic92 ]; + maintainers = with maintainers; [ mic92 qyliss ]; }; } diff --git a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix index e1a40c06d18..75e7b6c98bc 100644 --- a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix @@ -18,12 +18,12 @@ with lib; mkDerivation rec { pname = "telegram-desktop"; - version = "1.9.8"; + version = "1.9.9"; # Telegram-Desktop with submodules src = fetchurl { url = "https://github.com/telegramdesktop/tdesktop/releases/download/v${version}/tdesktop-${version}-full.tar.gz"; - sha256 = "1rq3180l4ly0n0jj08cxy9l2d07scwp9hasmliva2xspyv7i9ksd"; + sha256 = "08bxlqiapj9yqj9ywni33n5k7n3ckgfhv200snjqyqy9waqph1i6"; }; postPatch = '' @@ -83,7 +83,6 @@ mkDerivation rec { install -Dm755 bin/telegram-desktop $out/bin/telegram-desktop mkdir -p $out/share/{kservices5,applications,metainfo} - sed "s,/usr/bin,$out/bin,g" "../lib/xdg/tg.protocol" > "$out/share/kservices5/tg.protocol" install -m444 "../lib/xdg/telegramdesktop.desktop" "$out/share/applications/telegram-desktop.desktop" install -m644 "../lib/xdg/telegramdesktop.appdata.xml" "$out/share/metainfo/telegramdesktop.metainfo.xml" diff --git a/pkgs/applications/networking/irc/hexchat/default.nix b/pkgs/applications/networking/irc/hexchat/default.nix index 7dd3792a3cb..263cf23c17f 100644 --- a/pkgs/applications/networking/irc/hexchat/default.nix +++ b/pkgs/applications/networking/irc/hexchat/default.nix @@ -7,13 +7,13 @@ stdenv.mkDerivation rec { pname = "hexchat"; - version = "2.14.2"; + version = "2.14.3"; src = fetchFromGitHub { owner = "hexchat"; repo = "hexchat"; rev = "v${version}"; - sha256 = "1kz81xfis0bw2cfd6ndw32jdzdl5azk9ixqj4a3lginmlj6fs45a"; + sha256 = "08kvp0dcn3bvmlqcfp9312075bwkqkpa8m7zybr88pfp210gfl85"; }; nativeBuildInputs = [ meson ninja pkgconfig ]; @@ -24,14 +24,6 @@ stdenv.mkDerivation rec { isocodes ]; - patches = [ - #https://github.com/hexchat/hexchat/issues/2237 - (fetchpatch { - url = "https://src.fedoraproject.org/rpms/hexchat/raw/8a08a0c8a8da503b18f2fbb15194c5f3728a689a/f/0001-Python-plugin-Call-EndInterpreter-when-deinit-ing-th.patch"; - sha256 = "1199dj3wvjqj6h5vlm7lzhaax84j9ki6an8y8fs4rww27iq0lk8g"; - }) - ]; - #hexchat and hexchat-text loads enchant spell checking library at run time and so it needs to have route to the path postPatch = '' sed -i "s,libenchant-2.so.2,${enchant2}/lib/libenchant-2.so.2,g" src/fe-gtk/sexy-spell-entry.c diff --git a/pkgs/applications/science/biology/seaview/default.nix b/pkgs/applications/science/biology/seaview/default.nix index 69dece88c27..fea8da41d70 100644 --- a/pkgs/applications/science/biology/seaview/default.nix +++ b/pkgs/applications/science/biology/seaview/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, coreutils, fltk, libjpeg }: stdenv.mkDerivation rec { - version = "4.7"; + version = "5.0"; pname = "seaview"; src = fetchurl { url = "ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_${version}.tar.gz"; - sha256 = "0fhyq7dcn0izhwcfin9ajsr7kmmsqm9f1np1rmhzg4digfwqb29n"; + sha256 = "0gzjqf5mm91pa1drwxvz229bv6l995npdggngszh6z6j4pfh8j7c"; }; buildInputs = [ fltk libjpeg ]; diff --git a/pkgs/applications/science/logic/ott/default.nix b/pkgs/applications/science/logic/ott/default.nix index 854a62a5538..fa7c3dd5e95 100644 --- a/pkgs/applications/science/logic/ott/default.nix +++ b/pkgs/applications/science/logic/ott/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "ott"; - version = "0.29"; + version = "0.30"; src = fetchFromGitHub { owner = "ott-lang"; repo = "ott"; rev = version; - sha256 = "0saznk2mjbhp3j57imy2p2j0938026bw5m5gqbj59vcvk1rwwl22"; + sha256 = "16bxfnm30z94x36vr8vs6zd6fj55vnb7aypjl6hf7clk42040brc"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/science/physics/sherpa/default.nix b/pkgs/applications/science/physics/sherpa/default.nix index 045a77cea27..04115399c1a 100644 --- a/pkgs/applications/science/physics/sherpa/default.nix +++ b/pkgs/applications/science/physics/sherpa/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "sherpa"; - version = "2.2.6"; + version = "2.2.8"; src = fetchurl { url = "https://www.hepforge.org/archive/sherpa/SHERPA-MC-${version}.tar.gz"; - sha256 = "1cagkkz1pjl0pdf85w1qkwhx0afi3kxm1vnmfavq1zqhss7fc57i"; + sha256 = "1al1imdrknvbcy8k113xysc14lln4msbv281bf0kx7p73wz59mv3"; }; buildInputs = [ gfortran sqlite lhapdf rivet ]; diff --git a/pkgs/applications/version-management/git-and-tools/default.nix b/pkgs/applications/version-management/git-and-tools/default.nix index acfb30cd7c5..c6e046ea45b 100644 --- a/pkgs/applications/version-management/git-and-tools/default.nix +++ b/pkgs/applications/version-management/git-and-tools/default.nix @@ -135,6 +135,10 @@ let git-test = callPackage ./git-test { }; + git-workspace = callPackage ./git-workspace { + inherit (darwin.apple_sdk.frameworks) Security; + }; + git2cl = callPackage ./git2cl { }; gitFastExport = callPackage ./fast-export { }; diff --git a/pkgs/applications/version-management/git-and-tools/git-workspace/default.nix b/pkgs/applications/version-management/git-and-tools/git-workspace/default.nix new file mode 100644 index 00000000000..3a72f38903e --- /dev/null +++ b/pkgs/applications/version-management/git-and-tools/git-workspace/default.nix @@ -0,0 +1,31 @@ +{ stdenv +, fetchFromGitHub +, rustPlatform +, Security +}: + +rustPlatform.buildRustPackage rec { + pname = "git-workspace"; + version = "0.4.1"; + + src = fetchFromGitHub { + owner = "orf"; + repo = pname; + rev = "v${version}"; + sha256 = "01qxm00c5wqpy1clrvjr44v7cg4nqawaf5a6qnvvgswvis4kakzr"; + }; + + cargoSha256 = "16rkmk888alfvq8nsggi26vck1c7ya0fa5j7gv219g5py4gw2n34"; + + verifyCargoDeps = true; + + buildInputs = with stdenv; lib.optional isDarwin Security; + + meta = with stdenv.lib; { + description = "Sync personal and work git repositories from multiple providers"; + homepage = "https://github.com/orf/git-workspace"; + license = with licenses; [ mit ]; + platforms = platforms.all; + maintainers = with maintainers; [ misuzu ]; + }; +} diff --git a/pkgs/applications/video/mediathekview/default.nix b/pkgs/applications/video/mediathekview/default.nix index 586779252b6..9554105f20c 100644 --- a/pkgs/applications/video/mediathekview/default.nix +++ b/pkgs/applications/video/mediathekview/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, makeWrapper, jre }: stdenv.mkDerivation rec { - version = "13.5.0"; + version = "13.5.1"; pname = "mediathekview"; src = fetchurl { url = "https://download.mediathekview.de/stabil/MediathekView-${version}-linux.tar.gz"; - sha256 = "0n05w2d6sh03rjms7m9b5nj84cl16gkrc9nsn53kvldglmqmmrac"; + sha256 = "0fixr6drim0wmh4q44zikcla4mrnm44nm95d5naqsgx6idalddrc"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/applications/video/mkvtoolnix/default.nix b/pkgs/applications/video/mkvtoolnix/default.nix index 4736dedcb84..7ccf0e24762 100644 --- a/pkgs/applications/video/mkvtoolnix/default.nix +++ b/pkgs/applications/video/mkvtoolnix/default.nix @@ -13,13 +13,13 @@ with stdenv.lib; stdenv.mkDerivation rec { pname = "mkvtoolnix"; - version = "42.0.0"; + version = "43.0.0"; src = fetchFromGitLab { owner = "mbunkus"; repo = "mkvtoolnix"; rev = "release-${version}"; - sha256 = "0bjb1cx1sj61yhpraqryhxma4wiz0yl3asnbsv9hvq730v07hg0b"; + sha256 = "0ra9kgvhh5yhbr0hsia1va5lw45zr4kdwcdjhas5ljjyj75mlyxc"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/virtualization/xen/4.5.nix b/pkgs/applications/virtualization/xen/4.5.nix deleted file mode 100644 index af4721516ec..00000000000 --- a/pkgs/applications/virtualization/xen/4.5.nix +++ /dev/null @@ -1,261 +0,0 @@ -{ stdenv, callPackage, fetchurl, fetchpatch, fetchgit -, ocaml-ng -, withInternalQemu ? true -, withInternalTraditionalQemu ? true -, withInternalSeabios ? true -, withSeabios ? !withInternalSeabios, seabios ? null -, withInternalOVMF ? false # FIXME: tricky to build -, withOVMF ? false, OVMF -, withLibHVM ? true - -# qemu -, udev, pciutils, xorg, SDL, pixman, acl, glusterfs, spice-protocol, usbredir -, alsaLib -, ... } @ args: - -assert withInternalSeabios -> !withSeabios; -assert withInternalOVMF -> !withOVMF; - -with stdenv.lib; - -# Patching XEN? Check the XSAs at -# https://xenbits.xen.org/xsa/ -# and try applying all the ones we don't have yet. - -let - xsaPatch = { name , sha256 }: (fetchpatch { - url = "https://xenbits.xen.org/xsa/xsa${name}.patch"; - inherit sha256; - }); - - qemuDeps = [ - udev pciutils xorg.libX11 SDL pixman acl glusterfs spice-protocol usbredir - alsaLib - ]; - - xsa = import ./xsa-patches.nix { inherit fetchpatch; }; -in - -callPackage (import ./generic.nix (rec { - version = "4.5.5"; - - meta = { - knownVulnerabilities = [ "Security support ended in January 2018" ]; - }; - - src = fetchurl { - url = "https://downloads.xenproject.org/release/xen/${version}/xen-${version}.tar.gz"; - sha256 = "1y74ms4yc3znf8jc3fgyq94va2y0pf7jh8m9pfqnpgklywqnw8g2"; - }; - - # Sources needed to build tools and firmwares. - xenfiles = optionalAttrs withInternalQemu { - qemu-xen = { - src = fetchgit { - url = https://xenbits.xen.org/git-http/qemu-xen.git; - rev = "refs/tags/qemu-xen-${version}"; - sha256 = "014s755slmsc7xzy7qhk9i3kbjr2grxb5yznjp71dl6xxfvnday2"; - }; - buildInputs = qemuDeps; - patches = [ - (xsaPatch { - name = "197-4.5-qemuu"; - sha256 = "09gp980qdlfpfmxy0nk7ncyaa024jnrpzx9gpq2kah21xygy5myx"; - }) - (xsaPatch { - name = "208-qemuu-4.7"; - sha256 = "0z9b1whr8rp2riwq7wndzcnd7vw1ckwx0vbk098k2pcflrzppgrb"; - }) - (xsaPatch { - name = "209-qemuu/0001-display-cirrus-ignore-source-pitch-value-as-needed-i"; - sha256 = "1xvxzsrsq05fj6szjlpbgg4ia3cw54dn5g7xzq1n1dymbhv606m0"; - }) - (xsaPatch { - name = "209-qemuu/0002-cirrus-add-blit_is_unsafe-call-to-cirrus_bitblt_cput"; - sha256 = "0avxqs9922qjfsxxlk7bh10432a526j2yyykhags8dk1bzxkpxwv"; - }) - (xsaPatch { - name = "211-qemuu-4.6"; - sha256 = "1g090xs8ca8676vyi78b99z5yjdliw6mxkr521b8kimhf8crx4yg"; - }) - (xsaPatch { - name = "216-qemuu-4.5"; - sha256 = "0nh5akbal93czia1gh1pzvwq7gc4zwiyr1hbyk1m6wwdmqv6ph61"; - }) - ]; - meta.description = "Xen's fork of upstream Qemu"; - }; - } // optionalAttrs withInternalTraditionalQemu { - qemu-xen-traditional = { - src = fetchgit { - url = https://xenbits.xen.org/git-http/qemu-xen-traditional.git; - rev = "refs/tags/xen-${version}"; - sha256 = "0n0ycxlf1wgdjkdl8l2w1i0zzssk55dfv67x8i6b2ima01r0k93r"; - }; - buildInputs = qemuDeps; - patches = [ - (xsaPatch { - name = "197-4.5-qemut"; - sha256 = "17l7npw00gyhqzzaqamwm9cawfvzm90zh6jjyy95dmqbh7smvy79"; - }) - (xsaPatch { - name = "199-trad"; - sha256 = "0dfw6ciycw9a9s97sbnilnzhipnzmdm9f7xcfngdjfic8cqdcv42"; - }) - (xsaPatch { - name = "208-qemut"; - sha256 = "0960vhchixp60j9h2lawgbgzf6mpcdk440kblk25a37bd6172l54"; - }) - (xsaPatch { - name = "209-qemut"; - sha256 = "1hq8ghfzw6c47pb5vf9ngxwgs8slhbbw6cq7gk0nam44rwvz743r"; - }) - (xsaPatch { - name = "211-qemut-4.5"; - sha256 = "1z3phabvqmxv4b5923fx63hwdg4v1fnl15zbl88873ybqn0hp50f"; - }) - ]; - postPatch = '' - substituteInPlace xen-hooks.mak \ - --replace /usr/include/pci ${pciutils}/include/pci - ''; - meta.description = "Xen's fork of upstream Qemu that uses old device model"; - }; - } // optionalAttrs withInternalSeabios { - "firmware/seabios-dir-remote" = { - src = fetchgit { - url = https://xenbits.xen.org/git-http/seabios.git; - rev = "e51488c5f8800a52ac5c8da7a31b85cca5cc95d2"; - #rev = "rel-1.7.5"; - sha256 = "0jk54ybhmw97pzyhpm6jr2x99f702kbn0ipxv5qxcbynflgdazyb"; - }; - patches = [ ./0000-qemu-seabios-enable-ATA_DMA.patch ]; - meta.description = "Xen's fork of Seabios"; - }; - } // optionalAttrs withInternalOVMF { - "firmware/ovmf-dir-remote" = { - src = fetchgit { - url = https://xenbits.xen.org/git-http/ovmf.git; - rev = "cb9a7ebabcd6b8a49dc0854b2f9592d732b5afbd"; - sha256 = "07zmdj90zjrzip74fvd4ss8n8njk6cim85s58mc6snxmqqv7gmcq"; - }; - meta.description = "Xen's fork of OVMF"; - }; - } // { - # TODO: patch Xen to make this optional? - "firmware/etherboot/ipxe.git" = { - src = fetchgit { - url = https://git.ipxe.org/ipxe.git; - rev = "9a93db3f0947484e30e753bbd61a10b17336e20e"; - sha256 = "1ga3h1b34q0cl9azj7j9nswn7mfcs3cgfjdihrm5zkp2xw2hpvr6"; - }; - meta.description = "Xen's fork of iPXE"; - }; - } // optionalAttrs withLibHVM { - xen-libhvm-dir-remote = { - src = fetchgit { - name = "xen-libhvm"; - url = https://github.com/ts468/xen-libhvm; - rev = "442dcc4f6f4e374a51e4613532468bd6b48bdf63"; - sha256 = "9ba97c39a00a54c154785716aa06691d312c99be498ebbc00dc3769968178ba8"; - }; - buildPhase = '' - make - cd biospt - cc -Wall -g -D_LINUX -Wstrict-prototypes biospt.c -o biospt -I../libhvm -L../libhvm -lxenhvm - ''; - installPhase = '' - make install - cp biospt/biospt $out/bin/ - ''; - meta = { - description = '' - Helper library for reading ACPI and SMBIOS firmware values - from the host system for use with the HVM guest firmware - pass-through feature in Xen''; - license = licenses.bsd2; - }; - }; - }; - - configureFlags = [] - ++ optional (!withInternalQemu) "--with-system-qemu" # use qemu from PATH - ++ optional (withInternalTraditionalQemu) "--enable-qemu-traditional" - ++ optional (!withInternalTraditionalQemu) "--disable-qemu-traditional" - - ++ optional (withSeabios) "--with-system-seabios=${seabios}" - ++ optional (!withInternalSeabios && !withSeabios) "--disable-seabios" - - ++ optional (withOVMF) "--with-system-ovmf=${OVMF.fd}/FV/OVMF.fd" - ++ optional (withInternalOVMF) "--enable-ovmf"; - - patches = with xsa; flatten [ - ./0001-libxl-Spice-image-compression-setting-support-for-up.patch - ./0002-libxl-Spice-streaming-video-setting-support-for-upst.patch - ./0003-Add-qxl-vga-interface-support-for-upstream-qem.patch - XSA_190 - XSA_191 - XSA_192 - XSA_193 - XSA_195 - XSA_196 - XSA_198 - XSA_200 - XSA_202_45 - XSA_204_45 - XSA_206_45 - XSA_207 - XSA_212 - XSA_213_45 - XSA_214 - XSA_215 - XSA_217_45 - XSA_218_45 - XSA_219_45 - XSA_220_45 - XSA_221 - XSA_222_45 - XSA_223 - XSA_224_45 - XSA_227_45 - XSA_230 - XSA_231_45 - XSA_232 - XSA_233 - XSA_234_45 - XSA_235_45 - XSA_236_45 - XSA_237_45 - XSA_238_45 - XSA_239_45 - XSA_240_45 - XSA_241 - XSA_242 - XSA_243_45 - XSA_244_45 - XSA_245 - XSA_246_45 - XSA_247_45 - XSA_248_45 - XSA_249 - XSA_250_45 - XSA_251_45 - ]; - - # Fix build on Glibc 2.24. - NIX_CFLAGS_COMPILE = "-Wno-error=deprecated-declarations"; - - postPatch = '' - # Avoid a glibc >= 2.25 deprecation warnings that get fatal via -Werror. - sed 1i'#include <sys/sysmacros.h>' \ - -i tools/blktap2/control/tap-ctl-allocate.c \ - -i tools/libxl/libxl_device.c - ''; - - passthru = { - qemu-system-i386 = if withInternalQemu - then "lib/xen/bin/qemu-system-i386" - else throw "this xen has no qemu builtin"; - }; - -})) ({ ocamlPackages = ocaml-ng.ocamlPackages_4_02; } // args) diff --git a/pkgs/applications/virtualization/xen/packages.nix b/pkgs/applications/virtualization/xen/packages.nix index 791a3b91818..e30006fbcc1 100644 --- a/pkgs/applications/virtualization/xen/packages.nix +++ b/pkgs/applications/virtualization/xen/packages.nix @@ -1,62 +1,11 @@ { callPackage -, stdenv, overrideCC, gcc49 +, stdenv, overrideCC }: # TODO(@oxij) on new Xen version: generalize this to generate [vanilla slim # light] for each ./<version>.nix. rec { - - xen_4_5-vanilla = callPackage ./4.5.nix { - # At the very least included seabios and etherboot need gcc49, - # so we have to build all of it with gcc49. - stdenv = overrideCC stdenv gcc49; - - meta = { - description = "vanilla"; - longDescription = '' - Vanilla version of Xen. Uses forks of Qemu and Seabios bundled - with Xen. This gives vanilla experince, but wastes space and - build time: typical NixOS setup that runs lots of VMs will - build three different versions of Qemu when using this (two - forks and upstream). - ''; - }; - }; - - xen_4_5-slim = xen_4_5-vanilla.override { - withInternalQemu = false; - withInternalTraditionalQemu = true; - withInternalSeabios = false; - withSeabios = true; - - meta = { - description = "slim"; - longDescription = '' - Slimmed-down version of Xen that reuses nixpkgs packages as - much as possible. Different parts may get out of sync, but - this builds faster and uses less space than vanilla. Use with - `qemu_xen` from nixpkgs. - ''; - }; - }; - - xen_4_5-light = xen_4_5-vanilla.override { - withInternalQemu = false; - withInternalTraditionalQemu = false; - withInternalSeabios = false; - withSeabios = true; - - meta = { - description = "light"; - longDescription = '' - Slimmed-down version of Xen without `qemu-traditional` (you - don't need it if you don't know what it is). Use with - `qemu_xen-light` from nixpkgs. - ''; - }; - }; - xen_4_8-vanilla = callPackage ./4.8.nix { meta = { description = "vanilla"; diff --git a/pkgs/applications/window-managers/afterstep/default.nix b/pkgs/applications/window-managers/afterstep/default.nix index 5fcbff26b15..7e68de8393f 100644 --- a/pkgs/applications/window-managers/afterstep/default.nix +++ b/pkgs/applications/window-managers/afterstep/default.nix @@ -3,6 +3,7 @@ , fltk, gtk , libX11, libXext, libICE , dbus +, fetchpatch }: stdenv.mkDerivation rec { @@ -16,6 +17,13 @@ stdenv.mkDerivation rec { sha256 = "1j7vkx1ig4kzwffdxnkqv3kld9qi3sam4w2nhq18waqjsi8xl5gz"; }; + patches = [ + (fetchpatch { + url = "https://salsa.debian.org/debian/afterstep/raw/master/debian/patches/44-Fix-build-with-gcc-5.patch"; + sha256 = "1vipy2lzzd2gqrsqk85pwgcdhargy815fxlbn57hsm45zglc3lj4"; + }) + ]; + nativeBuildInputs = [ pkgconfig ]; buildInputs = [ libjpeg libtiff libpng freetype fltk gtk libX11 libXext libICE dbus dbus ]; diff --git a/pkgs/build-support/rust/build-rust-crate/configure-crate.nix b/pkgs/build-support/rust/build-rust-crate/configure-crate.nix index efc538f0fd6..c146ffef5ff 100644 --- a/pkgs/build-support/rust/build-rust-crate/configure-crate.nix +++ b/pkgs/build-support/rust/build-rust-crate/configure-crate.nix @@ -137,16 +137,7 @@ in '' CRATENAME=$(echo ${crateName} | sed -e "s/\(.*\)-sys$/\U\1/") grep -P "^cargo:(?!(rustc-|warning=|rerun-if-changed=|rerun-if-env-changed))" target/build/${crateName}.opt \ | sed -e "s/cargo:\([^=]*\)=\(.*\)/export DEP_$(echo $CRATENAME)_\U\1\E=\2/" > target/env - set -e - if [[ -n "$(ls target/build/${crateName}.out)" ]]; then - - if [[ -e "${libPath}" ]]; then - cp -r target/build/${crateName}.out/* $(dirname ${libPath}) #*/ - else - cp -r target/build/${crateName}.out/* src #*/ - fi - fi fi runHook postConfigure '' diff --git a/pkgs/build-support/rust/build-rust-crate/test/default.nix b/pkgs/build-support/rust/build-rust-crate/test/default.nix index cdffb30d9b3..6aad02992c1 100644 --- a/pkgs/build-support/rust/build-rust-crate/test/default.nix +++ b/pkgs/build-support/rust/build-rust-crate/test/default.nix @@ -199,6 +199,27 @@ let }) ]; }; + # Regression test for https://github.com/NixOS/nixpkgs/issues/74071 + # Whenevever a build.rs file is generating files those should not be overlayed onto the actual source dir + buildRsOutDirOverlay = { + src = symlinkJoin { + name = "buildrs-out-dir-overlay"; + paths = [ + (mkLib "src/lib.rs") + (mkFile "build.rs" '' + use std::env; + use std::ffi::OsString; + use std::fs; + use std::path::Path; + fn main() { + let out_dir = env::var_os("OUT_DIR").expect("OUT_DIR not set"); + let out_file = Path::new(&out_dir).join("lib.rs"); + fs::write(out_file, "invalid rust code!").expect("failed to write lib.rs"); + } + '') + ]; + }; + }; }; brotliCrates = (callPackage ./brotli-crates.nix {}); in lib.mapAttrs (key: value: mkTest (value // lib.optionalAttrs (!value?crateName) { crateName = key; })) cases // { diff --git a/pkgs/data/icons/qogir-icon-theme/default.nix b/pkgs/data/icons/qogir-icon-theme/default.nix index b7ae27aac68..8bfde381633 100644 --- a/pkgs/data/icons/qogir-icon-theme/default.nix +++ b/pkgs/data/icons/qogir-icon-theme/default.nix @@ -2,17 +2,19 @@ stdenv.mkDerivation rec { pname = "qogir-icon-theme"; - version = "2019-09-15"; + version = "2020-01-29"; src = fetchFromGitHub { owner = "vinceliuice"; repo = pname; - rev = "4e1b6c693615bc2c7c7a11df6f4b90f2e6fb67db"; - sha256 = "1vp1wp4fgmy5af8z8nb3m6wgmb6wbwlvx5smf9dxfcn254hdg8g0"; + rev = version; + sha256 = "0g6qiry4gzkr48xn4qi8sdna0hi3982sywskz9adkzqcznir542h"; }; nativeBuildInputs = [ gtk3 ]; + dontDropIconThemeCache = true; + installPhase = '' patchShebangs install.sh mkdir -p $out/share/icons @@ -21,7 +23,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "A colorful design icon theme for linux desktops"; - homepage = https://github.com/vinceliuice/Qogir-icon-theme; + homepage = "https://github.com/vinceliuice/Qogir-icon-theme"; license = with licenses; [ gpl3 ]; platforms = platforms.linux; maintainers = with maintainers; [ romildo ]; diff --git a/pkgs/desktops/cinnamon/cinnamon-control-center/default.nix b/pkgs/desktops/cinnamon/cinnamon-control-center/default.nix new file mode 100644 index 00000000000..79c4023152f --- /dev/null +++ b/pkgs/desktops/cinnamon/cinnamon-control-center/default.nix @@ -0,0 +1,124 @@ +{ stdenv +, fetchFromGitHub +, pkgconfig +, autoreconfHook +, glib +, gettext +, cinnamon-desktop +, intltool +, libxslt +, gtk3 +, libnotify +, gnome-menus +, libxml2 +, systemd +, upower +, cinnamon-settings-daemon +, colord +, polkit +, ibus +, libpulseaudio +, isocodes +, kerberos +, libxkbfile +, cinnamon-menus +, dbus-glib +, libgnomekbd +, libxklavier +, networkmanager +, libwacom +, gnome3 +, libtool +, wrapGAppsHook +, tzdata +, glibc +, networkmanagerapplet +, modemmanager +, xorg +, gdk-pixbuf +, cups +}: + +stdenv.mkDerivation rec { + pname = "cinnamon-control-center"; + version = "4.4.0"; + + src = fetchFromGitHub { + owner = "linuxmint"; + repo = pname; + rev = version; + sha256 = "1rxm5n2prh182rxvjs7psxgjddikrjr8492j22060gmyvq55n7kc"; + }; + + configureFlags = [ "--enable-systemd" ]; + + buildInputs = [ + gtk3 + glib + cinnamon-desktop + libnotify + cinnamon-menus + libxml2 + dbus-glib + systemd + polkit + libgnomekbd + libxklavier + colord + cinnamon-settings-daemon + libwacom + gnome3.gnome-online-accounts + tzdata + networkmanager + networkmanagerapplet + modemmanager + xorg.libXxf86misc + xorg.libxkbfile + gdk-pixbuf + cups + ]; + + /* ./panels/datetime/test-timezone.c:4:#define TZ_DIR "/usr/share/zoneinfo/" + ./panels/datetime/tz.h:32:# define TZ_DATA_FILE "/usr/share/zoneinfo/zone.tab" + ./panels/datetime/tz.h:34:# define TZ_DATA_FILE "/usr/share/lib/zoneinfo/tab/zone_sun.tab" */ + + postPatch = '' + patchShebangs ./autogen.sh + sed 's|TZ_DIR "/usr/share/zoneinfo/"|TZ_DIR "${tzdata}/share/zoneinfo/"|g' -i ./panels/datetime/test-timezone.c + sed 's|TZ_DATA_FILE "/usr/share/zoneinfo/zone.tab"|TZ_DATA_FILE "${tzdata}/share/zoneinfo/zone.tab"|g' -i ./panels/datetime/tz.h + sed 's|"/usr/share/i18n/locales/"|"${glibc}/share/i18n/locales/"|g' -i panels/datetime/test-endianess.c + ''; + + autoreconfPhase = '' + NOCONFIGURE=1 bash ./autogen.sh + ''; + + # it needs to have access to that file, otherwise we can't run tests after build + + preBuild = '' + mkdir -p $out/share/cinnamon-control-center/ + ln -s $PWD/panels/datetime $out/share/cinnamon-control-center/ + ''; + + preInstall = '' + rm -rfv $out + ''; + + nativeBuildInputs = [ + pkgconfig + autoreconfHook + wrapGAppsHook + gettext + intltool + libxslt + libtool + ]; + + meta = with stdenv.lib; { + homepage = "https://github.com/linuxmint/cinnamon-control-center"; + description = "A collection of configuration plugins used in cinnamon-settings"; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = [ maintainers.mkg20001 ]; + }; +} diff --git a/pkgs/desktops/cinnamon/default.nix b/pkgs/desktops/cinnamon/default.nix index b077ad18476..44b81e85c68 100644 --- a/pkgs/desktops/cinnamon/default.nix +++ b/pkgs/desktops/cinnamon/default.nix @@ -1,6 +1,7 @@ { pkgs, lib }: lib.makeScope pkgs.newScope (self: with self; { + cinnamon-control-center = callPackage ./cinnamon-control-center { }; cinnamon-desktop = callPackage ./cinnamon-desktop { }; cinnamon-menus = callPackage ./cinnamon-menus { }; cinnamon-translations = callPackage ./cinnamon-translations { }; diff --git a/pkgs/development/beam-modules/default.nix b/pkgs/development/beam-modules/default.nix index 031f7b5dda7..96062a57300 100644 --- a/pkgs/development/beam-modules/default.nix +++ b/pkgs/development/beam-modules/default.nix @@ -36,35 +36,35 @@ let buildMix = callPackage ./build-mix.nix {}; # BEAM-based languages. - elixir = elixir_1_9; + elixir = elixir_1_10; - elixir_1_9 = lib.callElixir ../interpreters/elixir/1.9.nix { + elixir_1_10 = lib.callElixir ../interpreters/elixir/1.10.nix { inherit rebar erlang; debugInfo = true; }; - elixir_1_8 = lib.callElixir ../interpreters/elixir/1.8.nix { + elixir_1_9 = lib.callElixir ../interpreters/elixir/1.9.nix { inherit rebar erlang; debugInfo = true; }; - elixir_1_7 = lib.callElixir ../interpreters/elixir/1.7.nix { + elixir_1_8 = lib.callElixir ../interpreters/elixir/1.8.nix { inherit rebar erlang; debugInfo = true; }; - elixir_1_6 = lib.callElixir ../interpreters/elixir/1.6.nix { + elixir_1_7 = lib.callElixir ../interpreters/elixir/1.7.nix { inherit rebar erlang; debugInfo = true; }; - elixir_1_5 = lib.callElixir ../interpreters/elixir/1.5.nix { + elixir_1_6 = lib.callElixir ../interpreters/elixir/1.6.nix { inherit rebar erlang; debugInfo = true; }; # Remove old versions of elixir, when the supports fades out: - # https://hexdocs.pm/elixir/compatibility-and-deprecations.html + # https://hexdocs.pm/elixir/compatibility-and-deprecations.html lfe = lfe_1_2; lfe_1_2 = lib.callLFE ../interpreters/lfe/1.2.nix { inherit erlang buildRebar3 buildHex; }; diff --git a/pkgs/development/compilers/crystal/default.nix b/pkgs/development/compilers/crystal/default.nix index 03a914695a0..12464344348 100644 --- a/pkgs/development/compilers/crystal/default.nix +++ b/pkgs/development/compilers/crystal/default.nix @@ -58,16 +58,17 @@ let outputs = [ "out" "lib" "bin" ]; - # we are almost able to run the full test suite now postPatch = '' substituteInPlace src/crystal/system/unix/time.cr \ --replace /usr/share/zoneinfo ${tzdata}/share/zoneinfo ln -s spec/compiler spec/std + mkdir /tmp/crystal substituteInPlace spec/std/file_spec.cr \ --replace '/bin/ls' '${coreutils}/bin/ls' \ - --replace '/usr/share' '/tmp/test' + --replace '/usr/share' '/tmp/crystal' \ + --replace '/usr' '/tmp' substituteInPlace spec/std/process_spec.cr \ --replace '/bin/cat' '${coreutils}/bin/cat' \ @@ -76,8 +77,23 @@ let --replace '"env"' '"${coreutils}/bin/env"' \ --replace '"/usr"' '"/tmp"' + substituteInPlace spec/std/socket/tcp_server_spec.cr \ + --replace '{% if flag?(:gnu) %}"listen: "{% else %}"bind: "{% end %}' '"bind: "' + substituteInPlace spec/std/system_spec.cr \ --replace '`hostname`' '`${nettools}/bin/hostname`' + + # See https://github.com/crystal-lang/crystal/pull/8640 + substituteInPlace spec/std/http/cookie_spec.cr \ + --replace '01 Jan 2020' '01 Jan #{Time.utc.year + 2}' + + # See https://github.com/crystal-lang/crystal/issues/8629 + substituteInPlace spec/std/socket/udp_socket_spec.cr \ + --replace 'it "joins and transmits to multicast groups"' 'pending "joins and transmits to multicast groups"' + + # See https://github.com/crystal-lang/crystal/pull/8699 + substituteInPlace spec/std/xml/xml_spec.cr \ + --replace 'it "handles errors"' 'pending "handles errors"' ''; buildInputs = commonBuildInputs extraBuildInputs; @@ -189,6 +205,24 @@ in rec { }; }; + binaryCrystal_0_30 = genericBinary { + version = "0.30.1"; + sha256s = { + x86_64-linux = "1k2mb74jh3ns3m7y73j4wpf571sayn73zbn6d7q81d09r280zrma"; + i686-linux = "0vsq1ayf922spydp2g2mmimc797jmm7nl5nljhfppcclrwygdyk2"; + x86_64-darwin = "1p3s4lwdgykb7h7aysjhrs7vm0zhinzw5d7rfv6jsyin4j8yxhzz"; + }; + }; + + binaryCrystal_0_31 = genericBinary { + version = "0.31.1"; + sha256s = { + x86_64-linux = "0r8salf572xrnr4m6ll9q5hz6jj8q7ff1rljlhmqb1r26a8mi2ih"; + i686-linux = "0hridnis5vvrswflx0q67xfg5hryhz6ivlwrb9n4pryj5d1gwjrr"; + x86_64-darwin = "1dgxgv0s3swkc5cwawzgpbc6bcd2nx4hjxc7iw2h907y1vgmbipz"; + }; + }; + crystal_0_25 = generic { version = "0.25.1"; sha256 = "15xmbkalsdk9qpc6wfpkly3sifgw6a4ai5jzlv78dh3jp7glmgyl"; @@ -228,18 +262,16 @@ in rec { version = "0.31.1"; sha256 = "1dswxa32w16gnc6yjym12xj7ibg0g6zk3ngvl76lwdjqb1h6lwz8"; doCheck = false; # 5 checks are failing now - binary = crystal_0_30; + binary = binaryCrystal_0_30; }; crystal_0_32 = generic { - version = "255bfc5fa925b95b72e34b26ad997fb2b3f83059"; - sha256 = "1dgk36cj5lwhs1c4zp0s1c9hjk0h3vljq6zwhlnzkl1xs7cgzim1"; - doCheck = false; # 5 checks are failing now - binary = crystal_0_31; - extraBuildInputs = [ readline ]; + version = "0.32.1"; + sha256 = "120ndi3nhh2r52hjvhwfb49cdggr1bzdq6b8xg7irzavhjinfza6"; + binary = binaryCrystal_0_31; }; - crystal = crystal_0_31; + crystal = crystal_0_32; crystal2nix = callPackage ./crystal2nix.nix {}; } diff --git a/pkgs/development/compilers/cudatoolkit/default.nix b/pkgs/development/compilers/cudatoolkit/default.nix index 6531316fa12..c3b16293204 100644 --- a/pkgs/development/compilers/cudatoolkit/default.nix +++ b/pkgs/development/compilers/cudatoolkit/default.nix @@ -2,8 +2,6 @@ , callPackage , fetchurl , gcc48 -, gcc49 -, gcc5 , gcc6 , gcc7 }: @@ -29,14 +27,14 @@ in rec { version = "7.0.28"; url = "http://developer.download.nvidia.com/compute/cuda/7_0/Prod/local_installers/cuda_7.0.28_linux.run"; sha256 = "1km5hpiimx11jcazg0h3mjzk220klwahs2vfqhjavpds5ff2wafi"; - gcc = gcc49; + gcc = gcc6; }; cudatoolkit_7_5 = common { version = "7.5.18"; url = "http://developer.download.nvidia.com/compute/cuda/7.5/Prod/local_installers/cuda_7.5.18_linux.run"; sha256 = "1v2ylzp34ijyhcxyh5p6i0cwawwbbdhni2l5l4qm21s1cx9ish88"; - gcc = gcc49; + gcc = gcc6; }; cudatoolkit_8 = common { @@ -49,7 +47,7 @@ in rec { sha256 = "1iaz5rrsnsb1p99qiqvxn6j3ksc7ry8xlr397kqcjzxqbljbqn9d"; }) ]; - gcc = gcc5; + gcc = gcc6; }; cudatoolkit_9_0 = common { diff --git a/pkgs/development/compilers/gcc/4.9/default.nix b/pkgs/development/compilers/gcc/4.9/default.nix index 2f85fc4b7e8..b287a8551f3 100644 --- a/pkgs/development/compilers/gcc/4.9/default.nix +++ b/pkgs/development/compilers/gcc/4.9/default.nix @@ -61,7 +61,13 @@ let majorVersion = "4"; inherit (stdenv) buildPlatform hostPlatform targetPlatform; patches = - [ ../use-source-date-epoch.patch ../parallel-bconfig.patch ./parallel-strsignal.patch ] + [ ../use-source-date-epoch.patch ../parallel-bconfig.patch ./parallel-strsignal.patch + (fetchpatch { + name = "avoid-ustat-glibc-2.28.patch"; + url = "https://gitweb.gentoo.org/proj/gcc-patches.git/plain/4.9.4/gentoo/100_all_avoid-ustat-glibc-2.28.patch?id=55fcb515620a8f7d3bb77eba938aa0fcf0d67c96"; + sha256 = "0b32sb4psv5lq0ij9fwhi1b4pjbwdjnv24nqprsk14dsc6xmi1g0"; + }) + ] ++ optional (targetPlatform != hostPlatform) ../libstdc++-target.patch ++ optional noSysDirs ../no-sys-dirs.patch ++ optional langFortran ../gfortran-driving.patch diff --git a/pkgs/development/compilers/gcc/5/default.nix b/pkgs/development/compilers/gcc/5/default.nix deleted file mode 100644 index f68ddc81f81..00000000000 --- a/pkgs/development/compilers/gcc/5/default.nix +++ /dev/null @@ -1,328 +0,0 @@ -{ stdenv, targetPackages, fetchurl, fetchpatch, noSysDirs -, langC ? true, langCC ? true, langFortran ? false -, langObjC ? stdenv.targetPlatform.isDarwin -, langObjCpp ? stdenv.targetPlatform.isDarwin -, langJava ? false -, langGo ? false -, profiledCompiler ? false -, staticCompiler ? false -, enableShared ? true -, enableLTO ? true -, texinfo ? null -, perl ? null # optional, for texi2pod (then pod2man); required for Java -, gmp, mpfr, libmpc, gettext, which -, libelf # optional, for link-time optimizations (LTO) -, isl ? null # optional, for the Graphite optimization framework. -, zlib ? null, boehmgc ? null -, zip ? null, unzip ? null, pkgconfig ? null -, gtk2 ? null, libart_lgpl ? null -, libX11 ? null, libXt ? null, libSM ? null, libICE ? null, libXtst ? null -, libXrender ? null, xorgproto ? null -, libXrandr ? null, libXi ? null -, x11Support ? langJava -, enableMultilib ? false -, enablePlugin ? stdenv.hostPlatform == stdenv.buildPlatform # Whether to support user-supplied plug-ins -, name ? "gcc" -, libcCross ? null -, threadsCross ? null # for MinGW -, crossStageStatic ? false -, # Strip kills static libs of other archs (hence no cross) - stripped ? stdenv.hostPlatform == stdenv.buildPlatform - && stdenv.targetPlatform == stdenv.hostPlatform -, gnused ? null -, cloog # unused; just for compat with gcc4, as we override the parameter on some places -, buildPackages -}: - -assert langJava -> zip != null && unzip != null - && zlib != null && boehmgc != null - && perl != null; # for `--enable-java-home' - -# LTO needs libelf and zlib. -assert libelf != null -> zlib != null; - -# Make sure we get GNU sed. -assert stdenv.hostPlatform.isDarwin -> gnused != null; - -# The go frontend is written in c++ -assert langGo -> langCC; - -# threadsCross is just for MinGW -assert threadsCross != null -> stdenv.targetPlatform.isWindows; - -with stdenv.lib; -with builtins; - -let majorVersion = "5"; - version = "${majorVersion}.5.0"; - - inherit (stdenv) buildPlatform hostPlatform targetPlatform; - - patches = - [ ../use-source-date-epoch.patch ] - ++ optional (targetPlatform != hostPlatform) ../libstdc++-target.patch - ++ optional noSysDirs ../no-sys-dirs.patch - ++ optional langFortran ../gfortran-driving.patch - ++ optional (targetPlatform.libc == "musl") ../libgomp-dont-force-initial-exec.patch - ++ optional stdenv.hostPlatform.isMusl (fetchpatch { - url = https://raw.githubusercontent.com/richfelker/musl-cross-make/e84b1bd1fc12a3def33111ca6df522cd6e5ec361/patches/gcc-5.3.0/0001-musl.diff; - sha256 = "0pppbf8myi2kjhm3z3479ihn1cm60kycfv60gj8yy1bs0pl1qcfm"; - }) - ++ optional (!crossStageStatic && targetPlatform.isMinGW) (fetchpatch { - url = "https://raw.githubusercontent.com/lhmouse/MINGW-packages/${import ../common/mfcgthreads-patches-repo.nix}/mingw-w64-gcc-git/9000-gcc-${majorVersion}-branch-Added-mcf-thread-model-support-from-mcfgthread.patch"; - sha256 = "074bl5n27d1ksa31pvzj4vd8xd46r118k0w94gdv3s1vydg7mah0"; - }); - - javaEcj = fetchurl { - # The `$(top_srcdir)/ecj.jar' file is automatically picked up at - # `configure' time. - - # XXX: Eventually we might want to take it from upstream. - url = "ftp://sourceware.org/pub/java/ecj-4.3.jar"; - sha256 = "0jz7hvc0s6iydmhgh5h2m15yza7p2rlss2vkif30vm9y77m97qcx"; - }; - - # Antlr (optional) allows the Java `gjdoc' tool to be built. We want a - # binary distribution here to allow the whole chain to be bootstrapped. - javaAntlr = fetchurl { - url = https://www.antlr.org/download/antlr-4.4-complete.jar; - sha256 = "02lda2imivsvsis8rnzmbrbp8rh1kb8vmq4i67pqhkwz7lf8y6dz"; - }; - - xlibs = [ - libX11 libXt libSM libICE libXtst libXrender libXrandr libXi - xorgproto - ]; - - javaAwtGtk = langJava && x11Support; - - /* Cross-gcc settings (build == host != target) */ - crossMingw = targetPlatform != hostPlatform && targetPlatform.libc == "msvcrt"; - stageNameAddon = if crossStageStatic then "stage-static" else "stage-final"; - crossNameAddon = optionalString (targetPlatform != hostPlatform) "${targetPlatform.config}-${stageNameAddon}-"; - -in - -# We need all these X libraries when building AWT with GTK. -assert x11Support -> (filter (x: x == null) ([ gtk2 libart_lgpl ] ++ xlibs)) == []; - -stdenv.mkDerivation ({ - pname = "${crossNameAddon}${name}${if stripped then "" else "-debug"}"; - inherit version; - - builder = ../builder.sh; - - src = fetchurl { - url = "mirror://gnu/gcc/gcc-${version}/gcc-${version}.tar.xz"; - sha256 = "11zd1hgzkli3b2v70qsm2hyqppngd4616qc96lmm9zl2kl9yl32k"; - }; - - inherit patches; - - outputs = [ "out" "lib" "man" "info" ]; - setOutputFlags = false; - NIX_NO_SELF_RPATH = true; - - libc_dev = stdenv.cc.libc_dev; - - hardeningDisable = [ "format" "pie" ]; - - # This should kill all the stdinc frameworks that gcc and friends like to - # insert into default search paths. - prePatch = stdenv.lib.optionalString hostPlatform.isDarwin '' - substituteInPlace gcc/config/darwin-c.c \ - --replace 'if (stdinc)' 'if (0)' - - substituteInPlace libgcc/config/t-slibgcc-darwin \ - --replace "-install_name @shlib_slibdir@/\$(SHLIB_INSTALL_NAME)" "-install_name $lib/lib/\$(SHLIB_INSTALL_NAME)" - - substituteInPlace libgfortran/configure \ - --replace "-install_name \\\$rpath/\\\$soname" "-install_name $lib/lib/\\\$soname" - ''; - - postPatch = - if targetPlatform != hostPlatform || stdenv.cc.libc != null then - # On NixOS, use the right path to the dynamic linker instead of - # `/lib/ld*.so'. - let - libc = if libcCross != null then libcCross else stdenv.cc.libc; - in - ( - '' echo "fixing the \`GLIBC_DYNAMIC_LINKER', \`UCLIBC_DYNAMIC_LINKER', and \`MUSL_DYNAMIC_LINKER' macros..." - for header in "gcc/config/"*-gnu.h "gcc/config/"*"/"*.h - do - grep -q _DYNAMIC_LINKER "$header" || continue - echo " fixing \`$header'..." - sed -i "$header" \ - -e 's|define[[:blank:]]*\([UCG]\+\)LIBC_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define \1LIBC_DYNAMIC_LINKER\2 "${libc.out}\3"|g' \ - -e 's|define[[:blank:]]*MUSL_DYNAMIC_LINKER\([0-9]*\)[[:blank:]]"\([^\"]\+\)"$|define MUSL_DYNAMIC_LINKER\1 "${libc.out}\2"|g' - done - '' - + stdenv.lib.optionalString (targetPlatform.libc == "musl") - '' - sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR' - '' - ) - else null; - - inherit noSysDirs staticCompiler langJava crossStageStatic - libcCross crossMingw; - - depsBuildBuild = [ buildPackages.stdenv.cc ]; - nativeBuildInputs = [ texinfo which gettext ] - ++ (optional (perl != null) perl) - ++ (optional javaAwtGtk pkgconfig); - - # For building runtime libs - depsBuildTarget = - if hostPlatform == buildPlatform then [ - targetPackages.stdenv.cc.bintools # newly-built gcc will be used - ] else assert targetPlatform == hostPlatform; [ # build != host == target - stdenv.cc - ]; - - buildInputs = [ - gmp mpfr libmpc libelf - targetPackages.stdenv.cc.bintools # For linking code at run-time - ] ++ (optional (isl != null) isl) - ++ (optional (zlib != null) zlib) - ++ (optionals langJava [ boehmgc zip unzip ]) - ++ (optionals javaAwtGtk ([ gtk2 libart_lgpl ] ++ xlibs)) - - # The builder relies on GNU sed (for instance, Darwin's `sed' fails with - # "-i may not be used with stdin"), and `stdenvNative' doesn't provide it. - ++ (optional hostPlatform.isDarwin gnused) - ; - - depsTargetTarget = optional (!crossStageStatic && threadsCross != null) threadsCross; - - NIX_LDFLAGS = stdenv.lib.optionalString hostPlatform.isSunOS "-lm -ldl"; - - preConfigure = import ../common/pre-configure.nix { - inherit (stdenv) lib; - inherit version hostPlatform langJava langGo; - }; - - dontDisableStatic = true; - - # TODO(@Ericson2314): Always pass "--target" and always prefix. - configurePlatforms = [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; - - configureFlags = import ../common/configure-flags.nix { - inherit - stdenv - targetPackages - crossStageStatic libcCross - version - - gmp mpfr libmpc libelf isl - - enableLTO - enableMultilib - enablePlugin - enableShared - - langC - langCC - langFortran - langJava javaAwtGtk javaAntlr javaEcj - langGo - langObjC - langObjCpp - ; - }; - - targetConfig = if targetPlatform != hostPlatform then targetPlatform.config else null; - - buildFlags = optional - (targetPlatform == hostPlatform && hostPlatform == buildPlatform) - (if profiledCompiler then "profiledbootstrap" else "bootstrap"); - - dontStrip = !stripped; - - doCheck = false; # requires a lot of tools, causes a dependency cycle for stdenv - - installTargets = optional stripped "install-strip"; - - # https://gcc.gnu.org/install/specific.html#x86-64-x-solaris210 - ${if hostPlatform.system == "x86_64-solaris" then "CC" else null} = "gcc -m64"; - - # Setting $CPATH and $LIBRARY_PATH to make sure both `gcc' and `xgcc' find the - # library headers and binaries, regarless of the language being compiled. - # - # Note: When building the Java AWT GTK peer, the build system doesn't honor - # `--with-gmp' et al., e.g., when building - # `libjava/classpath/native/jni/java-math/gnu_java_math_GMP.c', so we just add - # them to $CPATH and $LIBRARY_PATH in this case. - # - # Likewise, the LTO code doesn't find zlib. - # - # Cross-compiling, we need gcc not to read ./specs in order to build the g++ - # compiler (after the specs for the cross-gcc are created). Having - # LIBRARY_PATH= makes gcc read the specs from ., and the build breaks. - - CPATH = optionals (targetPlatform == hostPlatform) (makeSearchPathOutput "dev" "include" ([] - ++ optional (zlib != null) zlib - ++ optional langJava boehmgc - ++ optionals javaAwtGtk xlibs - ++ optionals javaAwtGtk [ gmp mpfr ] - )); - - LIBRARY_PATH = optionals (targetPlatform == hostPlatform) (makeLibraryPath ([] - ++ optional (zlib != null) zlib - ++ optional langJava boehmgc - ++ optionals javaAwtGtk xlibs - ++ optionals javaAwtGtk [ gmp mpfr ] - )); - - inherit - (import ../common/extra-target-flags.nix { - inherit stdenv crossStageStatic libcCross threadsCross; - }) - EXTRA_TARGET_FLAGS - EXTRA_TARGET_LDFLAGS - ; - - passthru = { - inherit langC langCC langObjC langObjCpp langFortran langGo version; - isGNU = true; - }; - - enableParallelBuilding = true; - inherit enableMultilib; - - inherit (stdenv) is64bit; - - meta = { - homepage = https://gcc.gnu.org/; - license = stdenv.lib.licenses.gpl3Plus; # runtime support libraries are typically LGPLv3+ - description = "GNU Compiler Collection, version ${version}" - + (if stripped then "" else " (with debugging info)"); - - longDescription = '' - The GNU Compiler Collection includes compiler front ends for C, C++, - Objective-C, Fortran, OpenMP for C/C++/Fortran, Java, and Ada, as well - as libraries for these languages (libstdc++, libgcj, libgomp,...). - - GCC development is a part of the GNU Project, aiming to improve the - compiler used in the GNU system including the GNU/Linux variant. - ''; - - maintainers = with stdenv.lib.maintainers; [ peti ]; - - platforms = - stdenv.lib.platforms.linux ++ - stdenv.lib.platforms.freebsd ++ - stdenv.lib.platforms.illumos ++ - stdenv.lib.platforms.darwin; - badPlatforms = [ "x86_64-darwin" ]; - }; -} - -// optionalAttrs (targetPlatform != hostPlatform && targetPlatform.libc == "msvcrt" && crossStageStatic) { - makeFlags = [ "all-gcc" "all-target-libgcc" ]; - installTargets = "install-gcc install-target-libgcc"; -} - -// optionalAttrs (enableMultilib) { dontMoveLib64 = true; } -) diff --git a/pkgs/development/compilers/nim/default.nix b/pkgs/development/compilers/nim/default.nix index bdb16c92207..316ddbfcb60 100644 --- a/pkgs/development/compilers/nim/default.nix +++ b/pkgs/development/compilers/nim/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { pname = "nim"; - version = "1.0.4"; + version = "1.0.6"; src = fetchurl { url = "https://nim-lang.org/download/${pname}-${version}.tar.xz"; - sha256 = "1q5fx9g40bk4ajghi856w5l34fmrl7avq5j6p0dr2xa4l52ib149"; + sha256 = "1cv6bxc7w21455c0pv0r2h64ljyzw266jsk1fsgiiyk2rx8mfkhk"; }; enableParallelBuilding = true; diff --git a/pkgs/development/compilers/picat/default.nix b/pkgs/development/compilers/picat/default.nix index b520a5e703c..87af63c671a 100644 --- a/pkgs/development/compilers/picat/default.nix +++ b/pkgs/development/compilers/picat/default.nix @@ -1,13 +1,16 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchurl, zlib }: stdenv.mkDerivation { - name = "picat-1.9-4"; + pname = "picat"; + version = "2.8-2"; src = fetchurl { - url = http://picat-lang.org/download/picat19_src.tar.gz; - sha256 = "0wvl95gf4pjs93632g4wi0mw1glzzhjp9g4xg93ll2zxggbxibli"; + url = http://picat-lang.org/download/picat28_src.tar.gz; + sha256 = "10hf2fxxbpq28gi39icr8c9wafdiy9ddfkk6l4rx7kkqyrdi7n85"; }; + buildInputs = [ zlib ]; + ARCH = if stdenv.hostPlatform.system == "i686-linux" then "linux32" else if stdenv.hostPlatform.system == "x86_64-linux" then "linux64" else throw "Unsupported system"; @@ -16,12 +19,12 @@ stdenv.mkDerivation { buildPhase = '' cd emu - make -f Makefile.picat.$ARCH + make -f Makefile.$ARCH ''; installPhase = '' mkdir -p $out/bin - cp picat_$ARCH $out/bin/picat + cp picat $out/bin/picat ''; meta = { diff --git a/pkgs/development/interpreters/elixir/1.10.nix b/pkgs/development/interpreters/elixir/1.10.nix new file mode 100644 index 00000000000..f9e1451354d --- /dev/null +++ b/pkgs/development/interpreters/elixir/1.10.nix @@ -0,0 +1,9 @@ +{ mkDerivation }: + +# How to obtain `sha256`: +# nix-prefetch-url --unpack https://github.com/elixir-lang/elixir/archive/v${version}.tar.gz +mkDerivation { + version = "1.10.0"; + sha256 = "1fz22c2jqqm2jvzxar11bh1djg3kqdn5rbxdddlz0cv6mfz7hvgv"; + minimumOTPVersion = "21"; +} diff --git a/pkgs/development/interpreters/elixir/1.5.nix b/pkgs/development/interpreters/elixir/1.5.nix deleted file mode 100644 index 229c42d9f7b..00000000000 --- a/pkgs/development/interpreters/elixir/1.5.nix +++ /dev/null @@ -1,7 +0,0 @@ -{ mkDerivation }: - -mkDerivation { - version = "1.5.3"; - sha256 = "00kgqcn9g6vflc551wniz9pwv7pszyf8v6smpkqs50j3kbliihy5"; - minimumOTPVersion = "18"; -} diff --git a/pkgs/development/libraries/glibc/default.nix b/pkgs/development/libraries/glibc/default.nix index 9327e0d936c..150681ebda1 100644 --- a/pkgs/development/libraries/glibc/default.nix +++ b/pkgs/development/libraries/glibc/default.nix @@ -54,9 +54,10 @@ callPackage ./common.nix { inherit stdenv; } { # Fix -Werror build failure when building glibc with musl with GCC >= 8, see: # https://github.com/NixOS/nixpkgs/pull/68244#issuecomment-544307798 (stdenv.lib.optional stdenv.hostPlatform.isMusl "-Wno-error=attribute-alias") - (stdenv.lib.optionals (stdenv.hostPlatform != stdenv.buildPlatform) [ + (stdenv.lib.optionals ((stdenv.hostPlatform != stdenv.buildPlatform) || stdenv.hostPlatform.isMusl) [ # Ignore "error: '__EI___errno_location' specifies less restrictive attributes than its target '__errno_location'" # New warning as of GCC 9 + # Same for musl: https://github.com/NixOS/nixpkgs/issues/78805 "-Wno-error=missing-attributes" ]) ]); diff --git a/pkgs/development/libraries/gspell/default.nix b/pkgs/development/libraries/gspell/default.nix index 8adb6264e37..71a427eb2a6 100644 --- a/pkgs/development/libraries/gspell/default.nix +++ b/pkgs/development/libraries/gspell/default.nix @@ -2,7 +2,7 @@ let pname = "gspell"; - version = "1.8.2"; + version = "1.8.3"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -11,7 +11,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "1miybm1z5cl91i25l7mfqlxhv7j8yy8rcgi0s1bgbb2vm71rb4dv"; + sha256 = "1s1dns070pz8dg04ppshdbx1r86n9406vkxcfs8hdghn0bfi9ras"; }; propagatedBuildInputs = [ enchant2 ]; # required for pkgconfig diff --git a/pkgs/development/libraries/odpic/default.nix b/pkgs/development/libraries/odpic/default.nix index f3e8742bb20..52dbdc10575 100644 --- a/pkgs/development/libraries/odpic/default.nix +++ b/pkgs/development/libraries/odpic/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub, fixDarwinDylibNames, oracle-instantclient, libaio }: let - version = "3.2.1"; + version = "3.3.0"; libPath = stdenv.lib.makeLibraryPath [ oracle-instantclient.lib ]; in stdenv.mkDerivation { @@ -13,7 +13,7 @@ in stdenv.mkDerivation { owner = "oracle"; repo = "odpi"; rev = "v${version}"; - sha256 = "1f9gznc7h73cgx32p55rkhzla6l7l9dg53ilwh6zdgdqlp7n018i"; + sha256 = "0qyfpincifz2vgicjd4q3rk563sg7927xja53rz3l7zv54wp9k62"; }; nativeBuildInputs = stdenv.lib.optional stdenv.isDarwin [ fixDarwinDylibNames ]; diff --git a/pkgs/development/libraries/quickder/default.nix b/pkgs/development/libraries/quickder/default.nix index 529d361f206..7e006236080 100644 --- a/pkgs/development/libraries/quickder/default.nix +++ b/pkgs/development/libraries/quickder/default.nix @@ -3,10 +3,10 @@ stdenv.mkDerivation rec { pname = "quickder"; - version = "1.2-6"; + version = "1.3.0"; src = fetchFromGitHub { - sha256 = "00wifjydgmqw2i5vmr049visc3shjqccgzqynkmmhkjhs86ghzr6"; + sha256 = "15lxv8vcjnsjxg7ywcac5p6mj5vf5pxq1219yap653ci4f1liqfr"; rev = "version-${version}"; owner = "vanrein"; repo = "quick-der"; diff --git a/pkgs/development/libraries/seasocks/default.nix b/pkgs/development/libraries/seasocks/default.nix index c6bb2afc270..9825c0c4035 100644 --- a/pkgs/development/libraries/seasocks/default.nix +++ b/pkgs/development/libraries/seasocks/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "seasocks"; - version = "1.4.2"; + version = "1.4.3"; src = fetchFromGitHub { owner = "mattgodbolt"; repo = pname; rev = "v${version}"; - sha256 = "1vzdhp61bq2bddz7kkpygdq5adxdspjw1q6a03j6qyyimapblrg8"; + sha256 = "1c2gc0k9wgbgn7y7wmq2ylp0gvdbmagc1x8c4jwbsncl1gy6x4g2"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/spdk/default.nix b/pkgs/development/libraries/spdk/default.nix index 51583fdbbcd..b1927277455 100644 --- a/pkgs/development/libraries/spdk/default.nix +++ b/pkgs/development/libraries/spdk/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "spdk"; - version = "19.10"; + version = "19.10.1"; src = fetchFromGitHub { owner = "spdk"; repo = "spdk"; rev = "v${version}"; - sha256 = "16v2vswn3rnnj7ak5w5rsak6r8f9b85gyhyll4ac1k4xpyj488hj"; + sha256 = "1fajcc4c09p6wcfw08k0x4x7v8yh0ghq94zhs5d4g9563p2va6ab"; }; patches = [ ./spdk-dpdk-meson.patch ]; diff --git a/pkgs/development/libraries/v8/3.14.nix b/pkgs/development/libraries/v8/3.14.nix deleted file mode 100644 index febadc2d6ac..00000000000 --- a/pkgs/development/libraries/v8/3.14.nix +++ /dev/null @@ -1,86 +0,0 @@ -# This old version of V8 is still needed for the R V8 module -{ stdenv, fetchFromGitHub, gyp, readline, python, which, icu, ... }: - -assert readline != null; - -with stdenv.lib; -let - version = "3.14.5.10"; - sha256 = "08vhl84166x13b3cbx8y0g99yqx772zd33gawsa1nxqkyrykql6k"; - - arch = if stdenv.is64bit then "x64" else "ia32"; - -in -stdenv.mkDerivation { - pname = "v8"; - inherit version; - - src = fetchFromGitHub { - owner = "v8"; - repo = "v8"; - rev = version; - inherit sha256; - }; - patchPhase = '' - sed -i 's,#!/usr/bin/env python,#!${python}/bin/python,' build/gyp_v8 - sed -i 's,#!/usr/bin/python,#!${python}/bin/python,' build/gyp_v8 - ''; - - configurePhase = '' - PYTHONPATH="tools/generate_shim_headers:$PYTHONPATH" \ - PYTHONPATH="$(toPythonPath ${gyp}):$PYTHONPATH" \ - build/gyp_v8 \ - -f make \ - --generator-output="out" \ - -Dflock_index=0 \ - -Dv8_enable_i18n_support=1 \ - -Duse_system_icu=1 \ - -Dconsole=readline \ - -Dcomponent=shared_library \ - -Dv8_target_arch=${arch} - ''; - - nativeBuildInputs = [ which ]; - buildInputs = [ readline python icu ]; - - # http://code.google.com/p/v8/issues/detail?id=2149 - NIX_CFLAGS_COMPILE = concatStringsSep " " [ - "-Wno-error=strict-overflow" - "-Wno-unused-local-typedefs" - "-Wno-aggressive-loop-optimizations" - ]; - - buildFlags = [ - "LINK=g++" - "-C out" - "builddir=$(CURDIR)/Release" - "BUILDTYPE=Release" - ]; - - postPatch = stdenv.lib.optionalString (!stdenv.cc.isClang) '' - sed -i build/standalone.gyp -e 's,-Wno-format-pedantic,,g' - ''; - - enableParallelBuilding = true; - - installPhase = '' - install -vD out/Release/d8 "$out/bin/d8" - ${if stdenv.hostPlatform.system == "x86_64-darwin" then '' - install -vD out/Release/lib.target/libv8.dylib "$out/lib/libv8.dylib" - '' else '' - install -vD out/Release/lib.target/libv8.so "$out/lib/libv8.so" - ''} - cp -vr include "$out/" - ''; - - postFixup = if stdenv.isDarwin then '' - install_name_tool -change /usr/local/lib/libv8.dylib $out/lib/libv8.dylib -change /usr/lib/libgcc_s.1.dylib ${stdenv.cc.cc.lib}/lib/libgcc_s.1.dylib $out/bin/d8 - install_name_tool -id $out/lib/libv8.dylib -change /usr/lib/libgcc_s.1.dylib ${stdenv.cc.cc.lib}/lib/libgcc_s.1.dylib $out/lib/libv8.dylib - '' else null; - - meta = with stdenv.lib; { - description = "Google's open source JavaScript engine"; - platforms = [ "x86_64-linux" "i686-linux" ]; - license = licenses.bsd3; - }; -} diff --git a/pkgs/development/python-modules/ROPGadget/default.nix b/pkgs/development/python-modules/ROPGadget/default.nix index 4daf76219ad..310e84a918d 100644 --- a/pkgs/development/python-modules/ROPGadget/default.nix +++ b/pkgs/development/python-modules/ROPGadget/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "ROPGadget"; - version = "5.9"; + version = "6.0"; src = fetchPypi { inherit pname version; - sha256 = "0lggiqws4dzq6k6c20l515pmjajl19gymsxfggkv771dv5kr1gbs"; + sha256 = "02wgrdrg0s0cr9yjsb4945244m8x8rr8jzxr8h8c6k2na4d17xf4"; }; propagatedBuildInputs = [ capstone ]; diff --git a/pkgs/development/python-modules/atlassian-python-api/default.nix b/pkgs/development/python-modules/atlassian-python-api/default.nix new file mode 100755 index 00000000000..3de3277a72d --- /dev/null +++ b/pkgs/development/python-modules/atlassian-python-api/default.nix @@ -0,0 +1,37 @@ +{ lib +, buildPythonPackage +, fetchPypi +, isPy3k +, certifi +, chardet +, idna +, oauthlib +, requests +, requests_oauthlib +, six +, urllib3 +, pytestrunner +, pytest +}: + +buildPythonPackage rec { + pname = "atlassian-python-api"; + version = "1.14.9"; + + src = fetchPypi { + inherit pname version; + sha256 = "28ff793cb43152384a810efc6ee572473daf3dc44bf7c1c295efb270a6d29251"; + }; + + checkInputs = [ pytestrunner pytest ]; + + propagatedBuildInputs = [ oauthlib requests requests_oauthlib six ]; + + meta = with lib; { + description = "Python Atlassian REST API Wrapper"; + homepage = "https://github.com/atlassian-api/atlassian-python-api"; + license = licenses.asl20; + maintainers = [ maintainers.arnoldfarkas ]; + }; +} + diff --git a/pkgs/development/python-modules/cvxopt/default.nix b/pkgs/development/python-modules/cvxopt/default.nix index 201c8ccda70..a842baca228 100644 --- a/pkgs/development/python-modules/cvxopt/default.nix +++ b/pkgs/development/python-modules/cvxopt/default.nix @@ -16,13 +16,13 @@ buildPythonPackage rec { pname = "cvxopt"; - version = "1.2.3"; + version = "1.2.4"; disabled = isPyPy; # hangs at [translation:info] src = fetchPypi { inherit pname version; - sha256 = "ea62a2a1b8e2db3a6ae44ac394f58e4620149af226c250c6f2b18739b48cfc21"; + sha256 = "1h9g79gxpgpy6xciqyypihw5q4ngp322lpkka1nkwk0ysybfsp7s"; }; # similar to Gsl, glpk, fftw there is also a dsdp interface diff --git a/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix new file mode 100644 index 00000000000..626d704f1d8 --- /dev/null +++ b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, fetchPypi, django, djangorestframework, pyjwt }: + +buildPythonPackage rec { + pname = "djangorestframework_simplejwt"; + version = "4.4.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "c315be70aa12a5f5790c0ab9acd426c3a58eebea65a77d0893248c5144a5080c"; + }; + + propagatedBuildInputs = [ django djangorestframework pyjwt ]; + + # Test raises django.core.exceptions.ImproperlyConfigured + doCheck = false; + + meta = with lib; { + description = "A minimal JSON Web Token authentication plugin for Django REST Framework"; + homepage = "https://github.com/davesque/django-rest-framework-simplejwt"; + license = licenses.mit; + maintainers = [ maintainers.arnoldfarkas ]; + }; +} diff --git a/pkgs/development/python-modules/lark-parser/default.nix b/pkgs/development/python-modules/lark-parser/default.nix index 38e51ac0ac6..1ba7df00ea3 100644 --- a/pkgs/development/python-modules/lark-parser/default.nix +++ b/pkgs/development/python-modules/lark-parser/default.nix @@ -5,13 +5,13 @@ buildPythonPackage rec { pname = "lark-parser"; - version = "0.7.8"; + version = "0.8.1"; src = fetchFromGitHub { owner = "lark-parser"; repo = "lark"; rev = version; - sha256 = "0gd5c3scpyir3h8clhwb5jsf8dkmh1vh7rx8135lkx9fxx01q0az"; + sha256 = "1mjicdvrzh9r9q3xrjrzaiaxk04r60a3l6l0vnp1hq3xfc9ccqc8"; }; # tests of Nearley support require js2py diff --git a/pkgs/development/python-modules/marionette-harness/moznetwork.nix b/pkgs/development/python-modules/marionette-harness/moznetwork.nix index 3901f7c310d..106a94b50e2 100644 --- a/pkgs/development/python-modules/marionette-harness/moznetwork.nix +++ b/pkgs/development/python-modules/marionette-harness/moznetwork.nix @@ -7,11 +7,11 @@ buildPythonPackage rec { pname = "moznetwork"; - version = "0.27"; + version = "1.0.0"; src = fetchPypi { inherit pname version; - sha256 = "09ypx5wif0mly6fk3491nlzg8whg6qw24x7h9w70hykdqindbh2s"; + sha256 = "0ws20l4ggb6mj7ycwrk5h7hj1jmj3mj0ca48k5jzsa4n042ahwrd"; }; propagatedBuildInputs = [ mozlog mozinfo ]; diff --git a/pkgs/development/python-modules/minio/default.nix b/pkgs/development/python-modules/minio/default.nix index 61567d851e9..a27867467ed 100644 --- a/pkgs/development/python-modules/minio/default.nix +++ b/pkgs/development/python-modules/minio/default.nix @@ -3,11 +3,11 @@ buildPythonPackage rec { pname = "minio"; - version = "5.0.5"; + version = "5.0.6"; src = fetchPypi { inherit pname version; - sha256 = "a5886b3ccb9b46cb4a322a486e06674d1f287b773f20b24cdc3de8450ff935a7"; + sha256 = "1p6gnbapwzpg7h0wv52fn4dd3dlhxl5qziadkiqjl8xaz8yp3vys"; }; disabled = !isPy3k; diff --git a/pkgs/development/python-modules/musicbrainzngs/default.nix b/pkgs/development/python-modules/musicbrainzngs/default.nix index 71bdcc8b547..7ae3445377e 100644 --- a/pkgs/development/python-modules/musicbrainzngs/default.nix +++ b/pkgs/development/python-modules/musicbrainzngs/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "musicbrainzngs"; - version = "0.6"; + version = "0.7.1"; src = fetchPypi { inherit pname version; - sha256 = "1dddarpjawryll2wss65xq3v9q8ln8dan7984l5dxzqx88d2dvr8"; + sha256 = "09z6k07pxncfgfc8clfmmxl2xqbd7h8x8bjzwr95hc0bzl00275b"; }; buildInputs = [ pkgs.glibcLocales ]; diff --git a/pkgs/development/python-modules/plyvel/default.nix b/pkgs/development/python-modules/plyvel/default.nix index b66d3231146..26c9a8af5e6 100644 --- a/pkgs/development/python-modules/plyvel/default.nix +++ b/pkgs/development/python-modules/plyvel/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "plyvel"; - version = "1.1.0"; + version = "1.2.0"; src = fetchPypi { inherit pname version; - sha256 = "1icsycqqjj8048a0drj3j75a71yiv2cmijh4w3jf9zxahh3k2c9p"; + sha256 = "1xkgj58i66w4h6gwp6fn6xj5nkrad6kxz3byhy9q1j94jml1ns1x"; }; buildInputs = [ pkgs.leveldb ] ++ stdenv.lib.optional isPy3k pytest; diff --git a/pkgs/development/python-modules/pyfaidx/default.nix b/pkgs/development/python-modules/pyfaidx/default.nix index eb0b573c438..7188ac8ce4a 100644 --- a/pkgs/development/python-modules/pyfaidx/default.nix +++ b/pkgs/development/python-modules/pyfaidx/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pyfaidx"; - version = "0.5.7"; + version = "0.5.8"; src = fetchPypi { inherit pname version; - sha256 = "512c409b36eadfe39c40e46112d8f96b29fdc1032dc424da2bdc783d476f5b0a"; + sha256 = "038xi3a6zvrxbyyfpp64ka8pcjgsdq4fgw9cl5lpxbvmm1bzzw2q"; }; propagatedBuildInputs = [ six ]; diff --git a/pkgs/development/python-modules/pygdbmi/default.nix b/pkgs/development/python-modules/pygdbmi/default.nix index fc19ab26573..c294b02c31d 100644 --- a/pkgs/development/python-modules/pygdbmi/default.nix +++ b/pkgs/development/python-modules/pygdbmi/default.nix @@ -6,7 +6,7 @@ buildPythonPackage rec { pname = "pygdbmi"; - version = "0.9.0.0"; + version = "0.9.0.2"; src = fetchFromGitHub { #inherit pname version; @@ -14,7 +14,7 @@ buildPythonPackage rec { owner = "cs01"; repo = "pygdbmi"; rev = version; - sha256 = "12xq9iajgqz23dska5x63hrx75icr5bwwswnmba0y69y39s0jpsj"; + sha256 = "01isx7912dbalmc3xsafk1a1n6bzzfrjn2363djcq0v57rqii53d"; }; checkInputs = [ gdb ]; diff --git a/pkgs/development/python-modules/pykeepass/default.nix b/pkgs/development/python-modules/pykeepass/default.nix index 1467783d76a..a8fff00ae15 100644 --- a/pkgs/development/python-modules/pykeepass/default.nix +++ b/pkgs/development/python-modules/pykeepass/default.nix @@ -5,11 +5,11 @@ buildPythonPackage rec { pname = "pykeepass"; - version = "3.1.2"; + version = "3.2.0"; src = fetchPypi { inherit pname version; - sha256 = "280b0884243d059df888a61fd3fc77b2ea76dce4fdb1c1f60f3ab9139ca1259c"; + sha256 = "1ysjn92bixq8wkwhlbhrjj9z0h80qnlnj7ks5478ndkzdw5gxvm1"; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/pynvim/default.nix b/pkgs/development/python-modules/pynvim/default.nix index a4765434f74..93cba65ae5e 100644 --- a/pkgs/development/python-modules/pynvim/default.nix +++ b/pkgs/development/python-modules/pynvim/default.nix @@ -12,11 +12,11 @@ buildPythonPackage rec { pname = "pynvim"; - version = "0.4.0"; + version = "0.4.1"; src = fetchPypi { inherit pname version; - sha256 = "1mp9ajsgrb9k2f3s8g7vdflj5mg02ii0d0wk4n6dmvjx52rqpzbi"; + sha256 = "0n2cx22lrmbq7xk7356lyn6k77ryqvkxplw9k0fglk35ckb1isam"; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/python-periphery/default.nix b/pkgs/development/python-modules/python-periphery/default.nix index 4d10c985092..1c6cdcc28a1 100644 --- a/pkgs/development/python-modules/python-periphery/default.nix +++ b/pkgs/development/python-modules/python-periphery/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "python-periphery"; - version = "2.0.0"; + version = "2.0.1"; src = fetchPypi { inherit pname version; - sha256 = "1arsibmc19iyzr70lqfrkq0fk6gd6imm3zxa7zxv93b6lwl5bw1d"; + sha256 = "1v0qpv0i2kqhjvl6wvvvy29hazjdcym7nn14qzv4r5zq1zsdb92x"; }; # Some tests require physical probing and additional physical setup diff --git a/pkgs/development/python-modules/statsmodels/default.nix b/pkgs/development/python-modules/statsmodels/default.nix index e45ccdd49c6..61d354c8d5f 100644 --- a/pkgs/development/python-modules/statsmodels/default.nix +++ b/pkgs/development/python-modules/statsmodels/default.nix @@ -13,11 +13,11 @@ buildPythonPackage rec { pname = "statsmodels"; - version = "0.10.2"; + version = "0.11.0"; src = fetchPypi { inherit pname version; - sha256 = "9cd2194c6642a8754e85f9a6e6912cdf996bebf6ff715d3cc67f65dadfd37cc9"; + sha256 = "0wcc7xbwlf8r2diw9fnzf4bg9h5cg406w7phd3dz37hx17yfi3ha"; }; checkInputs = with self; [ nose ]; diff --git a/pkgs/development/python-modules/sympy/default.nix b/pkgs/development/python-modules/sympy/default.nix index 2128be1a3c0..3a03fae154d 100644 --- a/pkgs/development/python-modules/sympy/default.nix +++ b/pkgs/development/python-modules/sympy/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "sympy"; - version = "1.5"; # Upgrades may break sage. Please test or ping @timokau. + version = "1.5.1"; # Upgrades may break sage. Please test or ping @timokau. src = fetchPypi { inherit pname version; - sha256 = "1s4w7q8gndim2ky825a84jmwcf7ryfn10wm8yxz9dw5z2307smii"; + sha256 = "d77901d748287d15281f5ffe5b0fef62dd38f357c2b827c44ff07f35695f4e7e"; }; checkInputs = [ glibcLocales ]; @@ -21,15 +21,16 @@ buildPythonPackage rec { # tests take ~1h doCheck = false; + pythonImportsCheck = [ "sympy" ]; preCheck = '' export LANG="en_US.UTF-8" ''; - meta = { + meta = with lib; { description = "A Python library for symbolic mathematics"; - homepage = https://www.sympy.org/; - license = lib.licenses.bsd3; - maintainers = with lib.maintainers; [ lovek323 timokau ]; + homepage = "https://www.sympy.org/"; + license = licenses.bsd3; + maintainers = with maintainers; [ lovek323 timokau ]; }; } diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index 6dbb19fcb69..8c50affaeff 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2020-01-22"; }; +let derive2 = derive { snapshot = "2020-01-27"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABACUS = derive2 { name="ABACUS"; version="1.0.0"; sha256="0m1dnkwjr1522l9ddbzzx7ayxvli17sbmk6s28adpmzzjwh2kd1i"; depends=[ggplot2 shiny]; }; @@ -230,10 +230,11 @@ in with self; { BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.3"; sha256="0z2n4ikj9cr2vcafpn0kmn5v24pdy7cd98asdy7njg5l54hajsxc"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2]; }; BANOVA = derive2 { name="BANOVA"; version="1.1.6"; sha256="07lxnklz8a2jrrmljhngs1zdrasl7fmn8n60rp8ns394ar7w640m"; depends=[coda rjags rstan runjags]; }; BART = derive2 { name="BART"; version="2.7"; sha256="16klaqzp525da6swlcdcr13mjlm88zpqyqnzjk6l4nlcwa3b7z1m"; depends=[nlme nnet Rcpp survival]; }; + BAS = derive2 { name="BAS"; version="1.5.5"; sha256="1iakx36r4lnl6xs77m9mfcj5w3mb4g482s2mpzq65v69k10nj8lj"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="0.2.2"; sha256="1q3sihp2iv1ikggzgd2k3vh2myz8bz31rzlaavw0n84d0h1zjxy2"; depends=[]; }; BASiNET = derive2 { name="BASiNET"; version="0.0.4"; sha256="0pmn4znqhpav729ai7zr027a7sx6bz2lmlk086crmwm1fnwipqq4"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; - BAT = derive2 { name="BAT"; version="1.6.0"; sha256="056ygqpbqznysjzg4z96wrgfa4bwp1lf5qrv9bp6692r3ldq0485"; depends=[hypervolume nls2 raster spatstat vegan]; }; + BAT = derive2 { name="BAT"; version="2.0.0"; sha256="0fwyarkgxxgckaky2wjf311ymlh78942j51a2dvjkwlbshcdqbij"; depends=[hypervolume nls2 raster spatstat vegan]; }; BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; BAwiR = derive2 { name="BAwiR"; version="1.2"; sha256="0j4vrngfddil4wyaskc0cgqhk496hq7wkrj85hxh76kn85gmfmiv"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; @@ -386,7 +387,7 @@ in with self; { BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; BayesMFSurv = derive2 { name="BayesMFSurv"; version="0.1.0"; sha256="1yxxzwjh1fgfh7qkzf9dfm3x0vbgb0v4p6bf6b5w14kvm06rzhkg"; depends=[coda FastGP MCMCpack mvtnorm Rcpp RcppArmadillo]; }; BayesMallows = derive2 { name="BayesMallows"; version="0.4.1"; sha256="0q89al122393nym9i71gz5mh10d304fcnbw2naxwzmj744g3lpm2"; depends=[cowplot dplyr ggplot2 HDInterval igraph PerMallows purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; - BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; }; + BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline R2jags]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; BayesNSGP = derive2 { name="BayesNSGP"; version="0.1.1"; sha256="11c83iafhl8yasyy8xwk9wladbj986xpmgc8d3yd9dxkic71flw8"; depends=[FNN Matrix nimble StatMatch]; }; @@ -461,6 +462,7 @@ in with self; { BioMedR = derive2 { name="BioMedR"; version="1.2.1"; sha256="0l3nmnqv0gzkbby4fhajbba910zpnbyckvxwds353pn54g9pcry7"; depends=[Biostrings ChemmineR fmcsR GOSemSim MASS org_Hs_eg_db pls randomForest rcdk RCurl rjson]; }; BioPET = derive2 { name="BioPET"; version="0.2.2"; sha256="0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioPETsurv = derive2 { name="BioPETsurv"; version="0.1.0"; sha256="0svwf8pzvlmlp8aacf70hzlg2h81m6lyhh4p73ixqw5v9bnyq6m0"; depends=[ggplot2 gridExtra survival]; }; + BioProbability = derive2 { name="BioProbability"; version="1.0"; sha256="051m761zf079s0p4q0ambwqc22qjz2yajxrsmnjnxvqiaadaj1q7"; depends=[]; }; BioStatR = derive2 { name="BioStatR"; version="3.0.0"; sha256="1fv37xckhpn0b744r71q7h57pr5j2y0v8hcc97cgzdsqd8p4axmk"; depends=[ggplot2]; }; BiocManager = derive2 { name="BiocManager"; version="1.30.10"; sha256="03n9s2vf7vgpgb5alpxwamf9xfkn32cbzngwyn6spq1bnh9a9dzk"; depends=[]; }; Biocomb = derive2 { name="Biocomb"; version="0.4"; sha256="0jqfac81r5731m0i9jq7v5ns9263p8r7i03jyz10y915kfr6ikh6"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; @@ -508,6 +510,7 @@ in with self; { BosonSampling = derive2 { name="BosonSampling"; version="0.1.1"; sha256="0wxn12h903a0mlrkrr3w4qd9ld2a4bifs95i98cnl2dsb76rwf12"; depends=[Rcpp RcppArmadillo]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.1-0"; sha256="13lhs6rynyj9cw13panqbn2jzkhq5fixhfd0ldr128gvw5d43hxg"; depends=[brglm gtools lme4 qvcalc]; }; BradleyTerryScalable = derive2 { name="BradleyTerryScalable"; version="0.1.0"; sha256="0g12fkfs2sykyd6fzf924zv8gj2js452c4pf0pz2p6156chwrk8c"; depends=[dplyr igraph Matrix purrr Rcpp RcppArmadillo]; }; + BrailleR = derive2 { name="BrailleR"; version="0.30.2"; sha256="0n44qmy7hcxa09zh4wr22mrv61zgpl4w67l0iivm0wibnkgz6vx7"; depends=[devtools dplyr extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest reticulate rmarkdown roloc rolocISCCNBS whisker XML xtable]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.6"; sha256="0lj8s42ndqqllnm8v978481zqmc751v31909rir1pkwcsm3irisx"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-6"; sha256="1m3ajvcksqfck5l5hj5xiflj4ry6d896ybv4f0xxks8chgnwmv0r"; depends=[]; }; @@ -521,6 +524,7 @@ in with self; { BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; BuyseTest = derive2 { name="BuyseTest"; version="1.8.3"; sha256="0kwv4jcn4rqdcglj2y9xm3i1g47jz7xdkp7r9hnvxq4xh3sp4fqr"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; + Bvalue = derive2 { name="Bvalue"; version="1.0"; sha256="17zlllzjrcq4grggal3hlg384990n62wnflr2g21fa6hcnglwy7d"; depends=[]; }; C443 = derive2 { name="C443"; version="1.0.0"; sha256="0d04769m9kkjqpj1cgfhqrri893nwi6qn7fz63z5pkym5cig5yyi"; depends=[cluster ggplot2 gridExtra igraph MASS partykit qgraph RColorBrewer reshape2 rpart]; }; C50 = derive2 { name="C50"; version="0.1.3"; sha256="01cbkilvp18r4f2khkj48w0znngvqckng91530kqqdqr2wc1ssac"; depends=[Cubist partykit]; }; CA3variants = derive2 { name="CA3variants"; version="2.0"; sha256="1wnc9qfcligpsi5ycmzw0igm14h6lvf4vd82aygnas6q41vnypwz"; depends=[ggplot2 ggrepel gridExtra multichull]; }; @@ -570,7 +574,7 @@ in with self; { CENFA = derive2 { name="CENFA"; version="1.0.0"; sha256="0ah8rh0gbwwhdfxzj9sj4i8iqbybkga09vinlh0r514ayv2qq2x8"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; CFC = derive2 { name="CFC"; version="1.1.2"; sha256="0k0685cgsd0lm7id6h216r4x236xn3nqj4h906qn2i0kvwmx4nda"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; - CGE = derive2 { name="CGE"; version="0.2.5"; sha256="1y5i55knkkkmx9wvwgawjyplr1ylkwpinks88g714a0b4ix077a1"; depends=[]; }; + CGE = derive2 { name="CGE"; version="0.2.8"; sha256="1bsrnrchwh2fjsx1gm8qx3f792ma5civw3w0j7is5lwyqff2q0cz"; depends=[]; }; CGGP = derive2 { name="CGGP"; version="1.0.1"; sha256="0vpj2bmij8wwckyzbmid6dyzpwy4jcbgpch3j143rag7pvgmc87q"; depends=[Rcpp RcppArmadillo]; }; CGManalyzer = derive2 { name="CGManalyzer"; version="1.2"; sha256="1993hxpaplb2qxrjfnm63alks0wb3msrffycmwd9p9md5glzci9y"; depends=[]; }; CGP = derive2 { name="CGP"; version="2.1-1"; sha256="05a6gydlb99yk2jpy2hyg4c30hqyp8dg2i9dmbjc1n5cmgpg3im9"; depends=[]; }; @@ -707,9 +711,9 @@ in with self; { ChaosGame = derive2 { name="ChaosGame"; version="0.4"; sha256="10bq8i6b6zkg8nzq5np998xabyvijizxfbvw1m2nvfh74vxspj4p"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="5.1.48"; sha256="0jadmz03y6zybmhm2zg8qbhrhgawxbf4c3fs021qyhvlcrs162q7"; depends=[ChemoSpecUtils plyr]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="5.2.12"; sha256="1qr09n2yc009x8ag0lbmn1m93qhck05jc8vx7j5wfa0g4i1b2r7f"; depends=[ChemoSpecUtils plyr readJDX]; }; ChemoSpec2D = derive2 { name="ChemoSpec2D"; version="0.3.166"; sha256="0b0pis55kz4r55qxwdlic87crnhkifvcylngkaxsfv1vqqz2wwlc"; depends=[ChemoSpecUtils]; }; - ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.3.60"; sha256="07isl2zdimyzsr1z319s6yblvqa2hjids150agh3h7jkw32m0azq"; depends=[plyr]; }; + ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.4.38"; sha256="1b7czs41jsniw1hnrm1c5z6pc5yiybbdnp2bqr810farmv61slzz"; depends=[plyr]; }; ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.13"; sha256="166va1g3m1wv21qkmw4wpz0bsrclh3jih8smxphdc13l9pqgclpq"; depends=[devtools kohonen MASS pls]; }; ChillModels = derive2 { name="ChillModels"; version="1.0.2"; sha256="06hgg893anh5z8an4l1xl4liz7d0m79n21h116vkdlymayccydbr"; depends=[]; }; ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; @@ -879,8 +883,8 @@ in with self; { DALEX = derive2 { name="DALEX"; version="0.4.9"; sha256="1zviaf7530v8w996lbma0vplabrapgwldi7h70pr0439sxaqd421"; depends=[ggplot2]; }; DALEXtra = derive2 { name="DALEXtra"; version="0.2.0"; sha256="1brjc9lybc1sfyk0n6bd44rpapgvi3p60wxw5qaajfcxrxk1286b"; depends=[DALEX ggdendro ggplot2 glmnet gridExtra reticulate]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; - DAMOCLES = derive2 { name="DAMOCLES"; version="1.1"; sha256="07z8mynhqnk1zcvm84w09xzkiy2dfxwhmnpi6gaddr3p0waql4gj"; depends=[ape caper deSolve expm geiger matrixStats picante]; }; - DAMisc = derive2 { name="DAMisc"; version="1.5"; sha256="1m418lmzy4sv5hj90j4r4j1bb2q43hxnmpd0mp16010fyr0asbcy"; depends=[AICcmodavg boot car coda effects fANCOVA games gdata lattice latticeExtra MASS nnet optiscale pscl QRM rstan VGAM xtable]; }; + DAMOCLES = derive2 { name="DAMOCLES"; version="2.2"; sha256="1rmm36k5w6y8pkb1vzkxnizx3my94kgai8h3x83cxr6mlbgn9lb8"; depends=[ape caper DAISIE DDD deSolve expm Hmisc Matrix matrixStats picante]; }; + DAMisc = derive2 { name="DAMisc"; version="1.5"; sha256="1m418lmzy4sv5hj90j4r4j1bb2q43hxnmpd0mp16010fyr0asbcy"; depends=[AICcmodavg boot car coda effects fANCOVA games gdata lattice latticeExtra MASS nnet optiscale pscl rstan VGAM xtable]; }; DAP = derive2 { name="DAP"; version="1.0"; sha256="0zzb05yxfaqp6qnr979q20rqy8sl5l825mxs0x9366qr7mz5k5ws"; depends=[MASS]; }; DATforDCEMRI = derive2 { name="DATforDCEMRI"; version="0.55"; sha256="0v26a1gi8l21ga5nqcnyfaa7gc8zxq6wk95b96ajgpdybb0l9s53"; depends=[akima lattice locfit matlab R_methodsS3 R_oo xtable]; }; DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; @@ -1249,7 +1253,6 @@ in with self; { EloRating = derive2 { name="EloRating"; version="0.46.10"; sha256="03cnbmm18cfh0awg221j478sb5r4r1v4hcilj5chr8qr4i1xmjvz"; depends=[network Rcpp RcppArmadillo Rdpack sna zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; EmbedSOM = derive2 { name="EmbedSOM"; version="1.9.1"; sha256="050j943774zmay6b62rqsb9ifd55cy5p77l0fkrb7b42jgxdqwpy"; depends=[]; }; - Emcdf = derive2 { name="Emcdf"; version="0.1.2"; sha256="0jb59jp1drcwipmk6yzg0cl366i8nhffa13c3x3fmhaj7ifv77vv"; depends=[lattice Rcpp]; }; EmiStatR = derive2 { name="EmiStatR"; version="1.2.2.0"; sha256="0xwmwbybiyb9688l5n98vir3rwbbjgpw5qb25p20lhlj1pqg95w1"; depends=[doParallel foreach lattice xts zoo]; }; EmissV = derive2 { name="EmissV"; version="0.665.1.0"; sha256="1xzpsr43pyvmvzbcw66cxv7qs9i8s7pg1w90l3ivx9mz7p8bfz8a"; depends=[data_table lwgeom ncdf4 raster sf sp units]; }; EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="2.0.1"; sha256="0k37lncjq14py3fvcr925gh66i31aphkniv5dn86gibxzdvbjnqc"; depends=[ggplot2 gridExtra]; }; @@ -1295,7 +1298,7 @@ in with self; { EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; EvaluationMeasures = derive2 { name="EvaluationMeasures"; version="1.1.0"; sha256="0b65y4rb650hhlgc18z0sm0danrrawqkazzdl9krl877djrgx87g"; depends=[]; }; Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.14"; sha256="1v681m7zyhpydyx1mbkk4iwxkkf0mx1317c3z2v465zg9bssp3c7"; depends=[zoo]; }; - EventDetectR = derive2 { name="EventDetectR"; version="0.3.3"; sha256="01yaf44bhkd8zwwky5m2a0bm3mmpkcyqhvjb4yqx0gszlfm1nb60"; depends=[forecast ggplot2 gridExtra imputeTS]; }; + EventDetectR = derive2 { name="EventDetectR"; version="0.3.4"; sha256="1zyv9k0l1s5djvp5hbbrlz96gw3126n43nm2iv6xsil90k2fp827"; depends=[forecast ggplot2 gridExtra imputeTS neuralnet]; }; EventStudy = derive2 { name="EventStudy"; version="0.36"; sha256="0pd7qbpj4agaqc57lianqinnardyh929nr8ammmpal191v2i7hmw"; depends=[curl data_table dplyr ggplot2 httr jsonlite magrittr miniUI openxlsx purrr RColorBrewer readr rlang rstudioapi scales shiny stringr testthat tidyquant tidyr]; }; EvoRAG = derive2 { name="EvoRAG"; version="2.0"; sha256="0gb269mpl2hbx1cqakv3qicpyrlfb4k8a3a7whhg90masbgmh8f6"; depends=[]; }; EvolutionaryGames = derive2 { name="EvolutionaryGames"; version="0.1.0"; sha256="1v6xpxk4kbjbmv8vh517rd76gyrd9znpxqdh4jqz8lvdpnpla4wv"; depends=[deSolve geometry ggplot2 interp MASS reshape2 rgl]; }; @@ -1371,7 +1374,6 @@ in with self; { FOCI = derive2 { name="FOCI"; version="0.1.1"; sha256="1q5zchbm7h5jizk5rl8xr31bdx9h88mzf8ih8kdqmsvpk1ckk13f"; depends=[dplyr magrittr proxy RANN]; }; FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; FPCA3D = derive2 { name="FPCA3D"; version="1.0"; sha256="1hrk9caad2s76dx59clxhia45a85khk1y2ii7955f336x55q34a5"; depends=[]; }; - FPDclustering = derive2 { name="FPDclustering"; version="1.4"; sha256="0cmq3qzpqx39q01qx7hwbgld9g6pvisr332fj0iy32zqw0bmmaq3"; depends=[cluster ExPosition mvtnorm rootSolve ThreeWay]; }; FPV = derive2 { name="FPV"; version="0.5"; sha256="0pxa8lbcxw2hx2n0frkx0pdndlcfm7gnh9qay9q53cf5gqzzwvvc"; depends=[FuzzyNumbers FuzzyNumbers_Ext_2]; }; FRACTION = derive2 { name="FRACTION"; version="1.0"; sha256="0g25dzsbharsq8bzfka96zccaqppdclax24mz5m080ddg4y8zj49"; depends=[]; }; FRAPO = derive2 { name="FRAPO"; version="0.4-1"; sha256="0mjcrplxr0cyybp5hzzwbq5j03w0f3iiiv1yk7mdqr5gb368dchq"; depends=[cccp Rglpk timeSeries]; }; @@ -1386,7 +1388,7 @@ in with self; { FSMUMI = derive2 { name="FSMUMI"; version="1.0"; sha256="06ri1zi86cm4arjdlp2pha2bvcc8vz6irvd9n3ja074hv62wxcw4"; depends=[FuzzyR lsa]; }; FSTpackage = derive2 { name="FSTpackage"; version="0.1"; sha256="1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb"; depends=[CompQuadForm MASS Matrix mvtnorm SKAT]; }; FSelector = derive2 { name="FSelector"; version="0.31"; sha256="1ryqrwz9h7ggxvmxyw4viajlkvd3r7i6ihcfrwsz6axyk5y0qarg"; depends=[digest entropy randomForest RWeka]; }; - FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.3.1"; sha256="0b5raplyw0qmlddcmxndwkkk0krdn6h0mdvfga8d4gvy3i8an0dh"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; + FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.3.3"; sha256="0x0jysqjvplzmcjs223wma9ng2pyd9mcbdgqmgsiifv0wdic07vi"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; FSinR = derive2 { name="FSinR"; version="1.0.6"; sha256="1w2sw0z4qyhnz3h790kznwmka5ml4n0kdqkynnwprsyclvxsfdwn"; depends=[caret class digest dplyr e1071 GA mlbench neuralnet prodlim purrr Rdpack rlang rpart tidyr]; }; FTICRMS = derive2 { name="FTICRMS"; version="0.8"; sha256="0kv02mdmwflhqdrkhzb55si5qnqqgdadgyabqc2hwr6iccn7aq8c"; depends=[lattice Matrix]; }; FUNTA = derive2 { name="FUNTA"; version="0.1.0"; sha256="02yxz95s2hs26mfmgwhv5d54yyjz0aczjpnay8b4gpzbpd6aci61"; depends=[]; }; @@ -1420,7 +1422,7 @@ in with self; { FeaLect = derive2 { name="FeaLect"; version="1.14"; sha256="1h6jc8n57mvyz3gi2jdx5xacwv5iim5sx86qzrg3v1higfr54b1l"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.4"; sha256="00yrji3grqgzg8c1hwqq5kb9xgqlnzwymy0b38cwixadc5w5lq8m"; depends=[BH digest magrittr Matrix Rcpp]; }; FedData = derive2 { name="FedData"; version="2.5.7"; sha256="07qgqhd3pg86qsih1ap7j02vriwabqna974q68bapfm52qnvm77z"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf sp stringr tibble xml2]; }; - FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; + FeedbackTS = derive2 { name="FeedbackTS"; version="1.5"; sha256="120labhmisw1x1bq8c4bl6l14vayvb9xcm6jsj1awacypgrr2ar2"; depends=[automap gstat mapdata maps proj4 sp]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.5"; sha256="05n8lvx3cs1ckliaj7ni2rbfcrdl7d0pzf9bkwlyd1779h684cxz"; depends=[data_table devEMF ggplot2 gridExtra plyr png sqldf stringr]; }; FiRE = derive2 { name="FiRE"; version="1.0"; sha256="0biy53i10yj261p3y55q7mdkd8g20smszd2dx36z1jkkfr61hy84"; depends=[BH Rcpp]; }; FiSh = derive2 { name="FiSh"; version="1.0"; sha256="07x9z2hn5dsjmg7p6y2flanp7hnzpp2r8d994mwhc2jw5i5xqx2d"; depends=[fda_usc KernSmooth]; }; @@ -1461,7 +1463,7 @@ in with self; { ForecastComb = derive2 { name="ForecastComb"; version="1.3.1"; sha256="07cbiv172mpkwvg6svhwgavlfy2144ir3y1l7w37wbd0ygs514id"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastFramework = derive2 { name="ForecastFramework"; version="0.10.3"; sha256="1c57jfcd156468s0bj0v523clg6pnwbw5spkqchbyz0fxzadc14p"; depends=[abind dplyr lubridate magrittr R6 reshape2 tibble]; }; - ForestFit = derive2 { name="ForestFit"; version="0.4.6"; sha256="00gjg1v21by2w7gmgf169vs8scyj0c9l2pf980fm4win4rwndla5"; depends=[ars]; }; + ForestFit = derive2 { name="ForestFit"; version="0.4.7"; sha256="0p6nygykx4ad8vznpjdx2ipnxpbhmp9sz3pg50hgkhmhzdlpwk1h"; depends=[ars]; }; ForestGapR = derive2 { name="ForestGapR"; version="0.0.2"; sha256="0xig9nal83xg312kgq6dhi7n67sa8ixlnh79x957w3n5rv9kdyf2"; depends=[igraph raster rgeos sp spatstat VGAM viridis]; }; ForestTools = derive2 { name="ForestTools"; version="0.2.0"; sha256="0q9nk9n001bnz5hd8cxj6wmaf8c7g0kwfkpa0hk6ap42666rrrah"; depends=[APfun imager raster rgeos sp]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; @@ -1502,6 +1504,7 @@ in with self; { GACFF = derive2 { name="GACFF"; version="1.0"; sha256="0lhjzb6cj8838dh4423929z7bwpa6cv3dn84rccwi3382vsq9g2c"; depends=[]; }; GAD = derive2 { name="GAD"; version="1.1.1"; sha256="0lyrw0d7i7yn1wkqlbf3rg3dnijfwsjn3kdbsg19hmvwq6qpsak2"; depends=[matrixStats R_methodsS3]; }; GADAG = derive2 { name="GADAG"; version="0.99.0"; sha256="1ycg48idrq2yrk1fxs16yl5wwg3kbfki8xppmh311rrzf75c6z4g"; depends=[igraph MASS Rcpp RcppArmadillo]; }; + GADGET = derive2 { name="GADGET"; version="0.2.0"; sha256="0z259dahki3ci5jskm2qp5q89bkr0wr74h7yxy057airc2m1cm7z"; depends=[DiceKriging DiceOptim lhs pbapply]; }; GADMTools = derive2 { name="GADMTools"; version="3.7-2"; sha256="0aabbs35wbcchab32phiaajzf5zgiis3qfv4nr5dc0mf0qjgsc6h"; depends=[classInt dplyr ggmap ggplot2 ggspatial gridExtra jsonlite lattice maptools prettymapr raster RColorBrewer rgdal rgeos rosm sf sp stringr tidyverse]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; GAMBoost = derive2 { name="GAMBoost"; version="1.2-3"; sha256="0450h9zf12r524lxk1lrv9imvvkk6fmyd3chnxp18nnvys7215pv"; depends=[Matrix]; }; @@ -1564,7 +1567,7 @@ in with self; { GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; GLIDE = derive2 { name="GLIDE"; version="1.0.2"; sha256="1z5h8br6aig24g5gsh8h6npm269id3h5gjjyf5avs4v08b51rpcv"; depends=[doParallel foreach MASS]; }; GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; - GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.6-5"; sha256="1n2xs4apf477bkyzw3p5zfmm3dzs4ja0m03b1vg8iic44d0nnxzv"; depends=[MASS matrixStats nlme]; }; + GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.6-8"; sha256="07pfvbzj4brfj5a66vqnj41zd335vy74hdv0kj7ziad18nh7xqla"; depends=[MASS matrixStats nlme]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; GLMpack = derive2 { name="GLMpack"; version="0.1.0"; sha256="15bpw42y999ljdw8ka2ysrrm0y73xz37wwi3j67i01wafipq82xy"; depends=[AER censReg effects foreign lme4 lmtest MASS Matrix nnet pBrackets plm pscl sandwich]; }; GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; @@ -1600,8 +1603,6 @@ in with self; { GPoM_FDLyapu = derive2 { name="GPoM.FDLyapu"; version="1.0"; sha256="1hpgiwh7b50gazp1msjsh2840b91wfrxhl2l45lxg6jr1m34q8pj"; depends=[deSolve GPoM]; }; GPrank = derive2 { name="GPrank"; version="0.1.4"; sha256="06j5fk427jkp5lphqlx48vfp4fagnxxnv4iyjcha8nvkswcblwgy"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; - GRANBase = derive2 { name="GRANBase"; version="2.5.0"; sha256="1sc7f47dnrwww89v4n8y41zvc9z8i8lv7qgya6nwf98vh9b6ifmi"; depends=[covr dplyr GRANCore htmlTable jsonlite markdown RCurl sendmailR stringi switchr]; }; - GRANCore = derive2 { name="GRANCore"; version="0.2.3"; sha256="1f3f34pk0y12yv9cl84ggg40p0bam0x48avrk5f56jskfr475kqk"; depends=[switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.1"; sha256="1jzvf45ch8x8f2x9kmvv02xz9bix5vplh8143vc4m1yyq42x09c6"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; GROAN = derive2 { name="GROAN"; version="1.2.0"; sha256="14n3k1wwz5pn82wcj00cdns4bp699f58k1nj8hp8jn0q7xr2sgv5"; depends=[plyr rrBLUP]; }; @@ -1617,7 +1618,7 @@ in with self; { GSIF = derive2 { name="GSIF"; version="0.5-5"; sha256="104v01yifpagj7kyjfy80c4dgn9wv76py0av90vmgc55qynmvv19"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="2.0.0"; sha256="1z8j6filfbqc83z495lw3qwwvd3xm35p7r00n74h9qabgvpydycd"; depends=[countrycode curl data_table future_apply httr R_utils]; }; + GSODR = derive2 { name="GSODR"; version="2.0.1"; sha256="0wy2qim636g5rfy046r3qab3r58j3w7ngx57k5gdarbwcjzxw07y"; depends=[countrycode curl data_table future_apply httr R_utils]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSelection = derive2 { name="GSelection"; version="0.1.0"; sha256="052vh1haxlzbh3c5i24nrwphapik1y8ribmh6q4axd447ggc0ff9"; depends=[gdata penalized SAM]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; @@ -1800,7 +1801,6 @@ in with self; { HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; HTSSIP = derive2 { name="HTSSIP"; version="1.4.1"; sha256="1j2f6f3i4di4bvsk44gxz0narg45ld2rahfn23wpgni5bszy0vb3"; depends=[ape coenocliner DESeq2 dplyr ggplot2 igraph lazyeval magrittr phyloseq plyr stringr tidyr vegan]; }; HUM = derive2 { name="HUM"; version="1.0"; sha256="1bq74l88jvscmq9ihv5wn06w2wng073ybvqb2bdx2dmiqlpv6jw2"; depends=[gtools Rcpp rgl]; }; - HURDAT = derive2 { name="HURDAT"; version="0.2.3"; sha256="1pcr0dlmhcblsgdyb79n377523x347d4gbzia247cpv52y4kbk0q"; depends=[dplyr purrr readr rlang rvest tidyr xml2]; }; HW_pval = derive2 { name="HW.pval"; version="1.0"; sha256="14nmyqw2d9cmn64789yc54fmiqanh6n1dizp7vj94h7b0jwq63yy"; depends=[]; }; HWEBayes = derive2 { name="HWEBayes"; version="1.4"; sha256="1rbffx6pn031a278ps9aqxcaq8yi73s5kf60za143ysbfxv9dphw"; depends=[MCMCpack mvtnorm]; }; HWEintrinsic = derive2 { name="HWEintrinsic"; version="1.2.2"; sha256="035r5bi7m66g351cmrfmf4cj5qqm4fn5pgy3lzsp3gyp2dv0rkg5"; depends=[]; }; @@ -1844,7 +1844,7 @@ in with self; { HybridFS = derive2 { name="HybridFS"; version="0.1.3"; sha256="0sb3i8ymgydi9hvxzdzydqap1gd7w5qcrs9clc0y5n26zd2mwqm5"; depends=[caTools FSelector InformationValue ROCR woeBinning]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; HydeNet = derive2 { name="HydeNet"; version="0.10.9"; sha256="1glzbr91cwp99qk1cyf8824fg8jvghgf84gc64jjn2q70vczcf5f"; depends=[checkmate DiagrammeR dplyr magrittr nnet pixiedust plyr rjags stringr]; }; - HydroCode = derive2 { name="HydroCode"; version="1.0.0"; sha256="060g2kspa7970m6hlv9lnvrkik8v8xgsg35hvj2radnrawrv5a30"; depends=[]; }; + HydroCode = derive2 { name="HydroCode"; version="1.0.1"; sha256="0093a19d52pvy5f0c8l8vxix0kni2c6ablqsfxflwwg9wbms81pa"; depends=[sp]; }; HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; HypergeoMat = derive2 { name="HypergeoMat"; version="3.0.0"; sha256="03xnvb7d80nak7wawfi2sniq9syjbjx5gk71xsgchgwqsdnixp8y"; depends=[gsl Rcpp RcppArmadillo]; }; @@ -1921,7 +1921,7 @@ in with self; { INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; IOHanalyzer = derive2 { name="IOHanalyzer"; version="0.1.3"; sha256="0l5baz68714vqlzfp6v1r93lwmv0nsq2wqidgf5zwj5r391y7c5g"; depends=[bsplus colorRamps colorspace colourpicker data_table dplyr DT ggplot2 igraph kableExtra magrittr markdown PlayerRatings plotly RColorBrewer Rcpp reshape2 scales shiny shinydashboard shinyjs withr]; }; IPCAPS = derive2 { name="IPCAPS"; version="1.1.5"; sha256="0d1nws86k1yph2f4drwrh4jvmmc9nnqmmswpwirmgsp3ma58kc42"; depends=[apcluster expm fpc KRIS LPCM MASS Matrix Rmixmod]; }; - IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.1"; sha256="0y9ph0d00dy4y2alnwyli4i0nm9rqasxy5n3d3m0a5j2vvwjjfzq"; depends=[dplyr eeptools GlobalOptions lubridate testthat]; }; + IPDFileCheck = derive2 { name="IPDFileCheck"; version="0.6.2"; sha256="16fapss0y31y9ynizhv9z8zqywf0aam2v7g53dcwylvdjc6qpzi2"; depends=[dplyr eeptools GlobalOptions lubridate testthat]; }; IPEC = derive2 { name="IPEC"; version="0.1.2"; sha256="1fglr5hs61n13251145wqzvxy362fx32yzral96xd8li76ljxiic"; depends=[MASS numDeriv]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; @@ -2008,14 +2008,14 @@ in with self; { Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; }; Irescale = derive2 { name="Irescale"; version="2.3.0"; sha256="037bzli0zwlfbf5xmllqg2pi0shs33ggrnw69kzyw2sf780y3hs2"; depends=[e1071 fBasics ggplot2 imager Rdpack reshape2 sp]; }; IrishDirectorates = derive2 { name="IrishDirectorates"; version="1.4"; sha256="1mwjrmqga7f0p5w2m4f0i6mb68jimx6791pz03r8iqj3yx0vzkh0"; depends=[Rcpp RcppArmadillo]; }; - IrregLong = derive2 { name="IrregLong"; version="0.1.0"; sha256="0m0lzvdp3f57faylk5vihymyhya7b6kri01zql971lqmfazybjy8"; depends=[frailtypack geepack survival]; }; + IrregLong = derive2 { name="IrregLong"; version="0.2.0"; sha256="17s3gl550qzp81dl901iijfad3qg2mclsc00hsqyg0adh63jlj91"; depends=[data_table frailtypack geepack survival]; }; IsingFit = derive2 { name="IsingFit"; version="0.3.1"; sha256="1prdzzp15klkdy72379bjksdgxr15nk16pqm35w95341cddxchc7"; depends=[glmnet Matrix qgraph]; }; - IsingSampler = derive2 { name="IsingSampler"; version="0.2"; sha256="16vwb5pcqjvvsk9wsgj10mzhgh72iz1q6n8nmkva6y1l7xv54c8w"; depends=[magrittr nnet plyr Rcpp]; }; + IsingSampler = derive2 { name="IsingSampler"; version="0.2.1"; sha256="1cs4vk53b5fy6kywvycfjf62571yx92nvgp5i8hlvms1362ir7gv"; depends=[dplyr magrittr nnet plyr Rcpp]; }; Iso = derive2 { name="Iso"; version="0.0-18"; sha256="014mm5b1f7i6nwlz3kyg1biph0y542kcx5bd13p68cv5a928qzid"; depends=[]; }; IsoCI = derive2 { name="IsoCI"; version="1.1"; sha256="0r7ksfic6p2v95c953s4gbzzclk4ldxysm8szb8xba1w0nx2izil"; depends=[KernSmooth]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="2.0.1"; sha256="1y101x7138pdylp2qsmyd10dh0d3wwic292qfi2kbn3z849dlhnn"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="3.1"; sha256="0xh45p2ky3hh5p01yw27y6y7iikr6fbwalmw3qbw1y6c5jc3978v"; depends=[MASS]; }; + IsoplotR = derive2 { name="IsoplotR"; version="3.2"; sha256="00v2b7r537awxmns8m22gk3q225kkh68wwwzip5x6qrvykmnxdk6"; depends=[MASS]; }; IsoriX = derive2 { name="IsoriX"; version="0.8.1"; sha256="0rr9frj0mhismls60vgax357jgfyq2wci7rvhvp70fh5k998mzid"; depends=[lattice latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-2"; sha256="0haqb8fsn1z532z42vjz60na7hlwv5rhayxzbd4rkzx2wcvnlbhn"; depends=[clue]; }; @@ -2036,7 +2036,7 @@ in with self; { JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="0.1.3"; sha256="1p5vlk2fcrb42pi7srkymjacfg05vlaspvhaw94lq1rhvxdw87yl"; depends=[nlme Rcpp RcppEigen statmod survival]; }; JSmediation = derive2 { name="JSmediation"; version="0.1.0"; sha256="1qmjkachpvql0nrn7lf2n32w9zp12saha2y3zmdg086k1q12xifl"; depends=[broom data_table dplyr glue knitr magrittr MASS purrr rlang tibble]; }; - JWileymisc = derive2 { name="JWileymisc"; version="1.0.1"; sha256="1rd1k46h0gvkhhhcrr2d95k62msl5zxxyk03vj6asdd5r6h8hdqa"; depends=[cowplot data_table emmeans extraoperators ggplot2 ggthemes lavaan lme4 MASS mgcv mice multcompView psych quantreg rms robustbase VGAM]; }; + JWileymisc = derive2 { name="JWileymisc"; version="1.1.0"; sha256="08c09jcax0ppl9q47px2anybcj8rfha8xdx226y002valqji5bz3"; depends=[cowplot data_table emmeans extraoperators ggplot2 ggthemes lavaan lme4 MASS mgcv mice multcompView psych quantreg rms robustbase VGAM]; }; JacobiEigen = derive2 { name="JacobiEigen"; version="0.3-3"; sha256="1zcs9qhf2216c590hj6qc837rnciyfsirg4zg655vxn59fgzpvyb"; depends=[Rcpp]; }; JamendoR = derive2 { name="JamendoR"; version="0.1.0"; sha256="1v5i4ggc4igp83pik32fqp07ff8iv7dp93b3qhxcsy1msa4l88lx"; depends=[dplyr httr jsonlite]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-1.1"; sha256="11knns2b1b8kd4nf8zwfzdhj4xqwkx3f1ba672vqi7jfr47938hh"; depends=[]; }; @@ -2150,12 +2150,12 @@ in with self; { LPCM = derive2 { name="LPCM"; version="0.46-3"; sha256="1bm5y95lzwcv8arlh55sy17m6hz1x48bcjkrwf3x34ax90qimf66"; depends=[]; }; LPGraph = derive2 { name="LPGraph"; version="2.0"; sha256="1d3czxihaz3f09bfb34knqb6prhcx50kh8y4qrhhakic999z6ifw"; depends=[car PMA SDMTools]; }; LPKsample = derive2 { name="LPKsample"; version="2.0"; sha256="1jg99025vk42rnjdymh3nj71npn4pmdsmk6rvnx3lykpi72f85dz"; depends=[apcluster igraph mclust]; }; - LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; }; + LPM = derive2 { name="LPM"; version="2.8"; sha256="0a4cf7chjyfwp1s8dfyfgbm2k6nybfmfh4bhz8b8pfj1an68bdr6"; depends=[fracdiff MASS powdist]; }; LPRelevance = derive2 { name="LPRelevance"; version="2.1"; sha256="0hcg8yl6l8r0aybprrn0zi8mkwp2wldbh53w9dagfrpnz5la05qa"; depends=[BayesGOF Bolstad2 ggplot2 leaps locfdr polynom reshape2]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; LPTime = derive2 { name="LPTime"; version="1.0-2"; sha256="08lb6884kj9pg12mzx67fdnqb86x5s6yzb72hh3nrz50awj1f8nn"; depends=[orthopolynom]; }; - LPWC = derive2 { name="LPWC"; version="0.99.5"; sha256="13iv2v8lkyz9rpjzz2pr6b5g6nh79j8vd5hpx03vjyx08ii0dnq6"; depends=[]; }; + LPWC = derive2 { name="LPWC"; version="1.0.0"; sha256="0jgz8rkhhsdiwz7jq568axcsfwlkzdpwssr76zx33r0gz6mf3lln"; depends=[nleqslv]; }; LPmerge = derive2 { name="LPmerge"; version="1.7"; sha256="1wf7hfj670pnzzxyqm3vwrbrvxdbyprh42s5vpv4y54a0w4nr83g"; depends=[Matrix Rglpk]; }; LPower = derive2 { name="LPower"; version="0.1.1"; sha256="00sabp2snfm0175c0cfyv83yd1zb3b8h2wrr7yxgkmr4i3py1fn7"; depends=[MASS nlme]; }; LRQMM = derive2 { name="LRQMM"; version="1.2.0"; sha256="0v8jxpg1rpr9fm9069zh8846z5l0ad71i229pvsilvdrn1m4vf3l"; depends=[corpcor GeneticsPed kinship2 Matrix MCMCglmm quantreg SparseM sparsesvd]; }; @@ -2482,7 +2482,7 @@ in with self; { ManifoldOptim = derive2 { name="ManifoldOptim"; version="0.1.4"; sha256="0c5hw01nlnxrys8d9qhwvnls834i0081pf9iic9kx5k6ckc7iwha"; depends=[Rcpp RcppArmadillo]; }; ManlyMix = derive2 { name="ManlyMix"; version="0.1.14"; sha256="0zpcc74965n435d4fah41r9nz0kjyn46hkjl1s0kvlllqj6n69wg"; depends=[]; }; ManyTests = derive2 { name="ManyTests"; version="1.2"; sha256="1mi7wvnkcd95126f1h8vl8skn397yd2zqvcswprqar54p161wgyi"; depends=[]; }; - Map2NCBI = derive2 { name="Map2NCBI"; version="1.3"; sha256="04fhnghakygpwrmhrwqr6g0r62zsxl0czy5bn3xl5iqzaswcd4i1"; depends=[rentrez]; }; + Map2NCBI = derive2 { name="Map2NCBI"; version="1.4"; sha256="1ssqnm9g5p0nnhdyp9dqbbsz3hw8jzdwy0rv3csp8fxm0f1bi1kb"; depends=[rentrez]; }; MapGAM = derive2 { name="MapGAM"; version="1.2-5"; sha256="0ardqsa7smx0syh1l591bm6a1rb7kvcyw3rlb3hkfk8rk4k60qmr"; depends=[colorspace gam maptools sp survival]; }; Mapinguari = derive2 { name="Mapinguari"; version="1.0.0"; sha256="1jfqinfr6wkpmkp4jm9ixgawcywm3n1ni03h6zngvx74saz7kd3g"; depends=[dplyr magrittr raster rgdal rlang stringr testthat]; }; MareyMap = derive2 { name="MareyMap"; version="1.3.4"; sha256="1wap0syzgd0w3xla2x4bcasn8zzlj63r5yyf9r479nvifjxdqxzz"; depends=[tkrplot]; }; @@ -2573,7 +2573,7 @@ in with self; { MinBAR = derive2 { name="MinBAR"; version="1.1.0"; sha256="03hzv6a56w0d6di3jp3w3fgckwxkqb1cy3xiwcvzyg5lzm4z9p2x"; depends=[dismo ecospat geosphere lattice latticeExtra maxnet raster rgdal sp]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; - Minirand = derive2 { name="Minirand"; version="0.1.2"; sha256="1p4b1lq4iqvg335wp7mhvr0m23k69vnhw99kyn3ys0brf7889dgc"; depends=[]; }; + Minirand = derive2 { name="Minirand"; version="0.1.3"; sha256="19lib0qh3xfzvpgsskl3yypmjygss0w7pimz0136av0px5b4jran"; depends=[]; }; MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; }; MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; @@ -2603,7 +2603,7 @@ in with self; { ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.2.1"; sha256="17yw46yr0n9hddvlhh73jdpmpdlpa581n5xjpwkr6cpr2f7xxpqc"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.5"; sha256="15gbg5568qj81wp6yy31amb2b7wl1wvlmgpmdp29lvz1p33jx2y1"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; - MomTrunc = derive2 { name="MomTrunc"; version="5.63"; sha256="0kyz4cplkd7yhls78x08fla7yciv5103xr7j8b5gnpv0ncbhhzd4"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt tmvtnorm]; }; + MomTrunc = derive2 { name="MomTrunc"; version="5.69"; sha256="14wvrkyasz9x54rk8cmdx523hsyvzhg2g6bx63gzah6wg5inmj25"; depends=[hypergeo mvtnorm Rcpp RcppArmadillo tlrmvnmvt]; }; Momocs = derive2 { name="Momocs"; version="1.2.9"; sha256="13pgn31hv529z33mi020w8wm8ya7hyi5yfsp45a78wdhinqas9mm"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; @@ -2698,6 +2698,7 @@ in with self; { NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; NITPicker = derive2 { name="NITPicker"; version="1.0.1"; sha256="00jmin7y1bp7a4a1qcvv3rkgiy9qij7gbkxcdgpiyzcs6aaif59z"; depends=[fda fda_usc fdasrvf]; }; + NLMR = derive2 { name="NLMR"; version="1.0"; sha256="0i5whvr42mizkv37fa4am81sfq58fsz9rnrhjlig4id9nddm6m9x"; depends=[checkmate dplyr fasterize RandomFields raster Rcpp sf spatstat tibble]; }; NLP = derive2 { name="NLP"; version="0.2-0"; sha256="0xbhkrnxcbf322jfw31xcn4y2gnk5y7ccq1bz4h3prf44h0whr7w"; depends=[]; }; NLPclient = derive2 { name="NLPclient"; version="1.0"; sha256="0jhlz9mqziyk5574vl8qjjs4g75x27rlk90wvzm3q9kjrjyvad35"; depends=[curl NLP xml2]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-5"; sha256="1jxxly85iajzb9qckkkar0przyxv005cyvry0qi5dkzhbyl5k490"; depends=[NLP qdap SnowballC]; }; @@ -2993,7 +2994,7 @@ in with self; { PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.4"; sha256="008hlgi56p9wydpsb2f1dxi4slml7p417c34lw00hivbl53d6x97"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; PQLseq = derive2 { name="PQLseq"; version="1.1"; sha256="1h8baf0apxvimarr2qwlh6pdzv88ib1dzw927swsyimjg44wjbfc"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; PREPShiny = derive2 { name="PREPShiny"; version="0.1.0"; sha256="0zsg07y6nhp2lma3pdz8xd981y3mh8k21il5jv0inma1d1xr4g3f"; depends=[dplyr psycho rmarkdown shiny]; }; - PRIMAL = derive2 { name="PRIMAL"; version="1.0.1"; sha256="0rxhy2spvnzkggcawbrf8i2940vqy3rgpif6hnp9l3y17qnx07hq"; depends=[Matrix Rcpp RcppEigen]; }; + PRIMAL = derive2 { name="PRIMAL"; version="1.0.2"; sha256="04fn0c10v9ai7vrrd4qr84rid3x42wq749rn5p1i6nkvmjv3dnhs"; depends=[Matrix Rcpp RcppEigen]; }; PRIMME = derive2 { name="PRIMME"; version="3.0-0"; sha256="1wvwdsaqg5rqx93svvhjvi64x6vxbr0a8za0a7cixy0vdg14vli4"; depends=[Matrix Rcpp]; }; PRIMsrc = derive2 { name="PRIMsrc"; version="0.8.2"; sha256="04g1saf511xs26m1iv9xfsmfs15fdfaxh5qlbay2mcb198270pd8"; depends=[glmnet Hmisc quantreg superpc survival]; }; PRISM_forecast = derive2 { name="PRISM.forecast"; version="0.1.6"; sha256="0w0fjbaafq90ac35h70z8g95q1i812v0ivkif4lx8l3q7rhjrvb5"; depends=[glmnet xts zoo]; }; @@ -3041,7 +3042,7 @@ in with self; { PakPMICS2014HH = derive2 { name="PakPMICS2014HH"; version="0.1.0"; sha256="1n6cyanqafscizgi1xqmc19w59yigxk5mvqinbivpdr7rydhrac6"; depends=[data_table]; }; PakPMICS2014HL = derive2 { name="PakPMICS2014HL"; version="0.1.0"; sha256="18i5p54zmqxph0lkbgz4ahrbmi2jwhjwdca7aqvx9az18ki5c9sx"; depends=[data_table]; }; PakPMICS2014Wm = derive2 { name="PakPMICS2014Wm"; version="0.1.0"; sha256="1sczczk07n91c21iqkxz1j1hixrk6p0c30ggahxbmk1cawqfn4cb"; depends=[data_table]; }; - PakPMICS2018 = derive2 { name="PakPMICS2018"; version="0.1.0"; sha256="0xrv0srm87fdsr1sicgw5s5pj0n03v9zxlwwx2wf1zp7mgafd4sk"; depends=[tibble]; }; + PakPMICS2018 = derive2 { name="PakPMICS2018"; version="1.0.0"; sha256="0jjch9nhwif01j6avbyr4ajpfnxb51idq6pnywfjhn46wn0by756"; depends=[tibble]; }; PakPMICS2018bh = derive2 { name="PakPMICS2018bh"; version="0.1.0"; sha256="0c1fy4mp45nay15plpfzv4xjx1dw17zrrild70sfbrmdfdwnjgcl"; depends=[tibble]; }; PakPMICS2018fs = derive2 { name="PakPMICS2018fs"; version="0.1.0"; sha256="009hx1r9a0q0xxrk5zsy39sj1ynj5qjvci37i82yihjvjxb3rj0g"; depends=[tibble]; }; PakPMICS2018hh = derive2 { name="PakPMICS2018hh"; version="0.1.0"; sha256="0wkjxy8qkndhnyf1w03cr3g7s03cm60yn0lxn5j6hvh019b28nmz"; depends=[tibble]; }; @@ -3063,7 +3064,7 @@ in with self; { PartCensReg = derive2 { name="PartCensReg"; version="1.39"; sha256="0blzv57cbxqghkz4fc3plvrcw80g0kx17dzmajkfv598m1wm6hc8"; depends=[Matrix optimx ssym]; }; Partiallyoverlapping = derive2 { name="Partiallyoverlapping"; version="2.0"; sha256="0pb0digyigqyzb0zqikgz002kqf1xprcjhxr62a7iqbzy1yycayf"; depends=[]; }; PathSelectMP = derive2 { name="PathSelectMP"; version="1.1"; sha256="036b70bpylmibny6dny79f7gdzn78arqgl2hfs031vygw63yyh9b"; depends=[mice MplusAutomation]; }; - PatternClass = derive2 { name="PatternClass"; version="1.7.1"; sha256="11r4p4s2pm0c4fmnpijzz5srhpai444mbx5nszhkssfsp9rh7cm9"; depends=[SDMTools]; }; + PatternClass = derive2 { name="PatternClass"; version="2.0.0"; sha256="0z2qbg8diskk33ffiqkhkkp5va1p56cij2a6yqfhybrrcxizliw1"; depends=[landscapemetrics raster]; }; Patterns = derive2 { name="Patterns"; version="1.2"; sha256="1dfy0jxr4h17j00yf2lfxlczvx6sdjz08hqsrj6r26qz3g6f16br"; depends=[abind animation Biobase c060 cluster elasticnet glmnet gplots igraph jetset KernSmooth lars lattice limma magic Mfuzz movMF msgps nnls pixmap plotrix SelectBoost spls survival tnet VGAM WGCNA]; }; PdPDB = derive2 { name="PdPDB"; version="2.0.1"; sha256="05aqg0rqrnlmvjxa32ms1vywgwhw5zlfkyf2ij0fn06rp8l2z3lv"; depends=[dendextend plyr tseries]; }; Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; @@ -3127,6 +3128,7 @@ in with self; { PoisBinOrdNor = derive2 { name="PoisBinOrdNor"; version="1.6.1"; sha256="12mchs62xq5jrq7y66l53yvwgm8iisa16120jmja0xdcr9sgcr84"; depends=[corpcor GenOrd Matrix mvtnorm psych]; }; PoisNonNor = derive2 { name="PoisNonNor"; version="1.6.1"; sha256="0pk1hqydpd6f8419kn986kf55gc3hyycfjyj1nvqsml7ic56ic98"; depends=[BB corpcor MASS Matrix]; }; PoisNor = derive2 { name="PoisNor"; version="1.3.1"; sha256="1s1z6bpxaa1ibdgv6bd5phccswd9bh26abwcywlnb55xl5vrgknv"; depends=[corpcor Matrix mvtnorm]; }; + PoissonBinomial = derive2 { name="PoissonBinomial"; version="1.0.0"; sha256="1yl01302r1b24qkanp8sd1n39s51yr0vyz99jrmpmdk2875zahi3"; depends=[BH Rcpp]; }; PoissonPCA = derive2 { name="PoissonPCA"; version="1.0.2"; sha256="0rb30l0x8knwvh8li62cfxms9b20db77g4r8cwgwasb9jjljxv3s"; depends=[]; }; PoissonSeq = derive2 { name="PoissonSeq"; version="1.1.2"; sha256="1hhx0gv06cp6hm6h36mqy411qn9x15y45crpzbyf8crfs85c6gbg"; depends=[combinat]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; @@ -3221,7 +3223,6 @@ in with self; { QQperm = derive2 { name="QQperm"; version="1.0.1"; sha256="06xhv54zgnx8i22j23a0dqxhh7my416idpkkwq93qd1rdzgamzc8"; depends=[]; }; QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; QRISK3 = derive2 { name="QRISK3"; version="0.3.0"; sha256="0aqqncmlhb5iks8081y34ydlls3g31j994fqqzsbsc3ckcks87qj"; depends=[]; }; - QRM = derive2 { name="QRM"; version="0.4-13"; sha256="0zxhm1bdbs4jizd909vw9yjdn484vmcrwcmpk3a7gr4142q9kdjh"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; @@ -3294,7 +3295,7 @@ in with self; { RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; }; - RATest = derive2 { name="RATest"; version="0.1.6"; sha256="1xbsdl302ybgcx58rvsz0c1055j7jr01a6zyaq34sq2rdy18vwrs"; depends=[ggplot2 gridExtra quantreg]; }; + RATest = derive2 { name="RATest"; version="0.1.7"; sha256="0xam006fp8qapq2lggpa0bq33qi1ziads6kfsqprdgvcfk64qzsn"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.18"; sha256="1c3m2j2cf1s51p783rdng5ns913bv7rbjc1vpmrmsxg2kf5f6qyq"; depends=[RCurl rjson]; }; RAhrefs = derive2 { name="RAhrefs"; version="0.1.4"; sha256="0yd7jbv2x711dnhbvwjjg7qhg8h8bh5564amsv9bkqw661i042m3"; depends=[assertthat httr jsonlite testthat]; }; RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.4"; sha256="0z08xwdn3vzwmprx5yh2xip5bqk13zrd47lwnsa2yin2phz6yry1"; depends=[]; }; @@ -3340,7 +3341,7 @@ in with self; { RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; REAT = derive2 { name="REAT"; version="3.0.2"; sha256="0x5cal502n8abynx1jk2ccmmggvd41rvd2gc6rxkbyvcp4794l82"; depends=[]; }; - REBayes = derive2 { name="REBayes"; version="1.8"; sha256="1mvi163djhnq3c711mx4a6mh1vmlcj80562czx12z2gmx13810nh"; depends=[Matrix reliaR]; }; + REBayes = derive2 { name="REBayes"; version="2.2"; sha256="1jh5vw9pbcf5gpmx3b5b36fh8rz5y8npx53aai0kxh49kjf8d63c"; depends=[Matrix reliaR]; }; RECA = derive2 { name="RECA"; version="1.7"; sha256="1xikj20flqajpkw4wyynmqd1pafbylzwfrmc8bz9pqgggjjhrqql"; depends=[]; }; REDCapExporter = derive2 { name="REDCapExporter"; version="0.1.0"; sha256="1sqxx6qd7sg76ybpvhk0xzhmlc73bknn3v2cj3s24dyg783ywaqx"; depends=[lubridate RCurl]; }; REDCapR = derive2 { name="REDCapR"; version="0.10.2"; sha256="0rdni325k0641yfv4g9l1szg1bl48767n6r1xkh8q3fnvqaqwnrg"; depends=[dplyr httr magrittr readr rlang tibble tidyr]; }; @@ -3537,7 +3538,7 @@ in with self; { RRF = derive2 { name="RRF"; version="1.9.1"; sha256="135adnf7cfs8gddmmmgmzarjzg0qfrd7l67367yhy2b1k0s5ng1w"; depends=[]; }; RRI = derive2 { name="RRI"; version="1.1"; sha256="0msdc5j5vx4snl8r3q5nn0mw2i80jds5pjykhmigcrx6jzg6h6i7"; depends=[Rcpp RcppArmadillo]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; - RRPP = derive2 { name="RRPP"; version="0.5.1"; sha256="1znzw0f85jqarg7m303v50kdc6zzx4byrp7nh3nfkhzyxplmc1aa"; depends=[]; }; + RRPP = derive2 { name="RRPP"; version="0.5.2"; sha256="0j31drphisckab9v93z6spdj9jgd0wx9dkbd2b22ff5la6bvil7k"; depends=[]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; @@ -3613,7 +3614,7 @@ in with self; { RWsearch = derive2 { name="RWsearch"; version="4.6.2"; sha256="1sak4ihzvba83q1zvn65983qz50cb1nbz1mwiasr3bzz27hhdp4a"; depends=[brew latexpdf networkD3 sig sos XML]; }; RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; - RXshrink = derive2 { name="RXshrink"; version="1.3"; sha256="0vripaygn9l71iirvnf84df6dwij2pcfnygw0g5f2ggfiq8snamg"; depends=[lars]; }; + RXshrink = derive2 { name="RXshrink"; version="1.3.1"; sha256="1kj661g4dkdnnkrc7vh7qpvfrgj77db6lwvvlpbynn8n3l3qbg94"; depends=[lars]; }; RYandexTranslate = derive2 { name="RYandexTranslate"; version="1.0"; sha256="0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s"; depends=[httr jsonlite RCurl]; }; RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; @@ -3666,7 +3667,7 @@ in with self; { RchivalTag = derive2 { name="RchivalTag"; version="0.0.7"; sha256="0i25rj3f54km2gdr8izgvqdbdbcq4nikywn5narm7sg79fv43pd4"; depends=[mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; }; Rchoice = derive2 { name="Rchoice"; version="0.3-1.1"; sha256="0nmbb6wfgz164fncljnsr11j2w1hi235hysxn1p2mgc6l301rqhm"; depends=[Formula maxLik msm plm plotrix]; }; RclusTool = derive2 { name="RclusTool"; version="0.91.2"; sha256="07d295fyiv0f19q75cppyqrac7fxlh2yx85nlmarkc6p3072jyrq"; depends=[class cluster conclust corrplot e1071 factoextra FactoMineR ggplot2 jpeg MASS mclust mda mmand nnet png randomForest reshape sp stringi stringr tcltk2 tkrplot]; }; - Rcmdr = derive2 { name="Rcmdr"; version="2.6-1"; sha256="1slwflnz64lbps16jzp2s0cjcns0cpxbh9mb4925l4xg08mc1a27"; depends=[abind car effects lme4 RcmdrMisc relimp tcltk2]; }; + Rcmdr = derive2 { name="Rcmdr"; version="2.6-2"; sha256="1fv4qx4w9x3gi64vba9qdkp6kghl83z5q7mmdjx7068n484kyhm1"; depends=[abind car effects lme4 RcmdrMisc relimp tcltk2]; }; RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.7-0"; sha256="08k4x957x08cmhad1r5w502zan13gmcfap16wjfb92b4v3f6dzqy"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; @@ -3713,9 +3714,9 @@ in with self; { Rcpp = derive2 { name="Rcpp"; version="1.0.3"; sha256="03h3zyjq948y0hrrs95lfk4zgx6wfrg64hjlrfrzf5na7bfh0d9b"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; RcppAPT = derive2 { name="RcppAPT"; version="0.0.5"; sha256="0188sabgfmgh83yr3hmqpg5cmhllfkxzbxxchqr2r2fmj6x0ib1a"; depends=[Rcpp]; }; - RcppAlgos = derive2 { name="RcppAlgos"; version="2.3.4"; sha256="1rmadfvavjn17xs0fs93h2dahil5nqg0w59f4zdsnn193cwcfi7p"; depends=[gmp Rcpp RcppThread]; }; + RcppAlgos = derive2 { name="RcppAlgos"; version="2.3.5"; sha256="0ir4m5lzph27c2cwxj32fds4ghx6n3mamxyakkpgr2arbd3sa3zq"; depends=[gmp Rcpp RcppThread]; }; RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.14"; sha256="1wiigx5g5788j6lyc3f6bs1rsvc4alyc3052g35hxl1giinxmhn4"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.800.3.0"; sha256="0kpcspg3mafi5kncjfhnbcwimvlf19jvrxilvhbpd20sap473mh3"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.800.4.0"; sha256="1csh54v4d0ccwmk4bqj4rca1d5rqpafvb4459x3q6k9sys0charx"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.6"; sha256="1bkrzdcm18z7qfkcfq5yc4s8z6a43y6cfsa09k6j9ni9bl2pd6hf"; depends=[Rcpp]; }; RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; @@ -3770,6 +3771,7 @@ in with self; { Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; Rdsm = derive2 { name="Rdsm"; version="2.1.1"; sha256="07fc6c2hv0vvg15va552y54cla1mrqsd75w3zh02vc7yd226l4rj"; depends=[bigmemory]; }; + Rdta = derive2 { name="Rdta"; version="1.0.0"; sha256="1zmyh61wrzqwyfjbfcxg41cri7hy9r0jfwnixcvd086y0vxq7fdn"; depends=[MCMCpack mvtnorm Rdpack]; }; Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; }; Rduino = derive2 { name="Rduino"; version="0.1"; sha256="0r1yy3a2n8a4niasfjn77gv130a062i802r7xhbg0abljv5m6ra5"; depends=[serial]; }; ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; }; @@ -3779,7 +3781,6 @@ in with self; { Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; Recon = derive2 { name="Recon"; version="0.3.0.0"; sha256="11gag2bl00pcy7ysfycaa58qarh6aigznldkc4kkn2178bl4ii62"; depends=[rootSolve]; }; RecordLinkage = derive2 { name="RecordLinkage"; version="0.4-11.2"; sha256="1gqf236bpxi0hbhv8bxscv78dwdb3z4x105qfyvzky01aydw5zgn"; depends=[ada data_table DBI e1071 evd ff ffbase ipred nnet rpart RSQLite xtable]; }; - RecordTest = derive2 { name="RecordTest"; version="0.1.0"; sha256="1x6w6f2zlp6xb561n5khbf53955kv2ydmy646v7w85ygx9p8hyni"; depends=[car ggplot2 Smisc]; }; Records = derive2 { name="Records"; version="1.0"; sha256="08y1g2m6bdrvv4rpkhd5v2lh7vprxy9bcx9ahp1f7p062bn2lwji"; depends=[]; }; RedditExtractoR = derive2 { name="RedditExtractoR"; version="2.1.5"; sha256="1b6pp1vdn7jnyl8k828dgkxrx8sy2wyhkrn4rnfavqw4qvhm0mhm"; depends=[dplyr igraph magrittr RJSONIO rlang visNetwork]; }; Redmonder = derive2 { name="Redmonder"; version="0.2.0"; sha256="02qrz1b0g7hdacj2s2bks5gfwnypkbiwlmn0bv7im1zz1swg9cp8"; depends=[]; }; @@ -3820,7 +3821,7 @@ in with self; { Rgbp = derive2 { name="Rgbp"; version="1.1.4"; sha256="1y51sms321sbrl3rgzp5hq4y5mqkrjxsyrq75gkcbwfvlakjcfrg"; depends=[mnormt sn]; }; Rglpk = derive2 { name="Rglpk"; version="0.6-4"; sha256="19mzpyimzq9zqnbi05j79b2di3nzaln8swggs9p8sqdr60qvr3d2"; depends=[slam]; }; Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; - RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.5.1"; sha256="1lrbl0nax7rzk460mh6rq9hydahdi3ckxk4kxx3xij29jl3lmijh"; depends=[png]; }; + RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.5.2"; sha256="1y2dinxmzx6mg6ynpk2q7f4k4rxjm66my185gafdcvpc4rl7svs7"; depends=[png]; }; Rhpc = derive2 { name="Rhpc"; version="0.19-276"; sha256="1wbdkqmaq3rdj5r9w0mddkcyiabyd9r26jp3i7i4w055mq2r1gs1"; depends=[]; }; RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.20-17"; sha256="0iwc06blr5sx7rylwczi2jrha8sk8qs0jklflwpidl0zj1jxdggp"; depends=[]; }; Ricetl = derive2 { name="Ricetl"; version="0.2.5.1"; sha256="1d7229ylnxgh2rvarwga229378ja79l978zjabf3sph4cqc1b965"; depends=[devtools gWidgets gWidgetsRGtk2 plyr readr readxl stringr tidyverse writexl]; }; @@ -3858,7 +3859,7 @@ in with self; { Rmixmod = derive2 { name="Rmixmod"; version="2.1.2.2"; sha256="1kfhaj47igcjs3h22slk8jywq85kbm5rnj4c1jhrp03hyzy2vg0v"; depends=[Rcpp RcppEigen]; }; RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; Rmosek = derive2 { name="Rmosek"; version="1.3.5"; sha256="18q39n2p3gms9zqrl8g15rjjk4v64365v0rm8r7zvvivh1hy5xa0"; depends=[]; }; - Rmpfr = derive2 { name="Rmpfr"; version="0.7-2"; sha256="1zq3as34r27v2yc729731997wdhxb6cs5ilmak4nmsljabnac7gc"; depends=[gmp]; }; + Rmpfr = derive2 { name="Rmpfr"; version="0.8-1"; sha256="09kw7hyca8xc09r2d88qj81cclar8acaq5q9q5rw9f49iffda0rr"; depends=[gmp]; }; Rmpi = derive2 { name="Rmpi"; version="0.6-9"; sha256="1rhycla98hxgnnxlxxldr1x51djak7c2jjvlrv3jcsvgwp1ymqdj"; depends=[]; }; Rmst = derive2 { name="Rmst"; version="0.0.3"; sha256="1fykpii17k460qlsjhhh5vag02lhkyk5l3zjmg8hifqp0cjhz2fl"; depends=[ggplot2 Rata reshape2 Rirt]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; @@ -4075,6 +4076,7 @@ in with self; { SNPassoc = derive2 { name="SNPassoc"; version="1.9-2"; sha256="113byj8zbg6xyxb1qzm76sqfyk3fap0sd90691zzm1x2pbfnb3mh"; depends=[haplo_stats mvtnorm survival]; }; SNPknock = derive2 { name="SNPknock"; version="0.8.2"; sha256="121pdgvdffj61hw8x8m76na0cg5iw5gb586q05ikw5d959mmbzrs"; depends=[Rcpp RcppArmadillo RcppProgress Rdpack]; }; SNPmaxsel = derive2 { name="SNPmaxsel"; version="1.0-3"; sha256="0pjvixwqzjd3jwccc8yqq9c76afvbmfq0z1w0cwyj8bblrjpx13z"; depends=[combinat mvtnorm]; }; + SNSequate = derive2 { name="SNSequate"; version="1.3.2"; sha256="0aln71h4g6xayh59zd7bsh66l0jv34zn5kc43ldm2g0d82gh6xr4"; depends=[emdbook knitr magic plyr progress statmod]; }; SNscan = derive2 { name="SNscan"; version="1.0"; sha256="1s7dxi7faih0phx5wk2xrrzhvfwicq3h2cg8x2klwbrslin973lz"; depends=[igraph poweRlaw Rmpfr]; }; SOAR = derive2 { name="SOAR"; version="0.99-11"; sha256="1n38gx5sxpkqfkk4y6vpp6g19b8bs5bisni9wn6311s0csizp86m"; depends=[]; }; SODC = derive2 { name="SODC"; version="1.0"; sha256="18s4rcp5dzchvwrzzbfhbs3x91zlg1rymjarxjk5i429mfrn0krx"; depends=[magic MASS ppls psych]; }; @@ -4139,7 +4141,7 @@ in with self; { STGS = derive2 { name="STGS"; version="0.1.0"; sha256="0xfwd0jsg3glbr3c5l5yyri4is5kg77ivgr6qlzaxp6p8q7yfzqf"; depends=[brnn glmnet kernlab randomForest rrBLUP]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; - STMotif = derive2 { name="STMotif"; version="1.0.4"; sha256="0667jqpn40y1pw69am59jhkyds9433fm1v67y3vgqi1z1zzpan19"; depends=[ggplot2 RColorBrewer reshape2 scales shiny]; }; + STMotif = derive2 { name="STMotif"; version="2.0.0"; sha256="190qwbh9lhq75mz20cyfsh77y5m91rbg5gharffknbq618gwlcmf"; depends=[ggplot2 RColorBrewer reshape2 scales shiny]; }; STOPES = derive2 { name="STOPES"; version="0.1"; sha256="0gv58nf0m67bfqc15c7n4gksqk7h661c9b55qapk210j259b7xbv"; depends=[changepoint glmnet MASS]; }; STPGA = derive2 { name="STPGA"; version="5.2.1"; sha256="0mwjv9r7x925ljmbwk2fl0xvf2n2hnf5n5z5p5rxr57ywvirqw1b"; depends=[AlgDesign emoa scales scatterplot3d]; }; STRAH = derive2 { name="STRAH"; version="1.0"; sha256="0a2av8by99sq7l28c7cjwm6nqhp1i4pd5qxcsarvwd8f9fckvr5z"; depends=[BiocManager Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19]; }; @@ -4164,7 +4166,7 @@ in with self; { SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; SamplerCompare = derive2 { name="SamplerCompare"; version="1.3.0"; sha256="1lqnkgbg1naa3crk3rakrf37vvxj6mbilbpxrv0k5iifdmh0b7k1"; depends=[mvtnorm]; }; SamplingBigData = derive2 { name="SamplingBigData"; version="1.0.0"; sha256="0khrh7vfqqzpfp16x0ic5ml854wr2fj28cx95s6c0pz91hzlxkns"; depends=[]; }; - SamplingStrata = derive2 { name="SamplingStrata"; version="1.4-1"; sha256="0sv24565w80xvllky3r88h6zc48c68mj9sp6ixp2n01f41x3lz25"; depends=[doParallel formattable memoise pbapply]; }; + SamplingStrata = derive2 { name="SamplingStrata"; version="1.5"; sha256="1rh26jcb2ksjfabpqprc0glw4b6ig8hagqjhxrm6pgji9para31x"; depends=[doParallel formattable memoise pbapply]; }; SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; }; SanzCircos = derive2 { name="SanzCircos"; version="0.1.0"; sha256="0vw41qldp1gsj4mx2hdd5jfhx9r8pv62i8gvs86p6bvfzy2l1lq4"; depends=[dplyr pbapply purrr randomcoloR readr tibble tidyr]; }; Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; @@ -4283,7 +4285,6 @@ in with self; { SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; SmarterPoland = derive2 { name="SmarterPoland"; version="1.7"; sha256="03vs6hcd96va9kfhl2yq77alnm33j1dxy79kgrx17hlijsy65qqv"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; - Smisc = derive2 { name="Smisc"; version="0.3.9.1"; sha256="1dsgn37w690xh2r4mk3nwsbnaxjnw1a5qywihridvybf58nqgs06"; depends=[doParallel plyr]; }; SmithWilsonYieldCurve = derive2 { name="SmithWilsonYieldCurve"; version="1.0.1"; sha256="0qvhd1dn2wm9gzyp6k7iq057xqpkngkb4cfmvmjqmf0vhysp371w"; depends=[]; }; SmoothHazard = derive2 { name="SmoothHazard"; version="1.4.1"; sha256="147wjxgxnijpmixrfyl8kd4scz2w1xb8dcwvpr60zg32nv22g17r"; depends=[lava mvtnorm prodlim]; }; SmoothWin = derive2 { name="SmoothWin"; version="3.0.0"; sha256="0zq2sq0w4rs3hrra24wgbbzv88d1hx6m8q8gmc5h6nbs1172hs66"; depends=[nlme Rfast]; }; @@ -4522,7 +4523,7 @@ in with self; { TSMSN = derive2 { name="TSMSN"; version="0.0.1"; sha256="0zy9r6i1p161h1zh0vnz1npsh48q3nc2c5hcgzvf78nfznnn6wg1"; depends=[mvtnorm numDeriv progress sn]; }; TSMining = derive2 { name="TSMining"; version="1.0"; sha256="1n32acagffiw31pr485ly3phx33zw7vj009bvw4lbqpixa1pszj2"; depends=[foreach ggplot2 plyr reshape2]; }; TSMySQL = derive2 { name="TSMySQL"; version="2015.4-1"; sha256="1gdda7li320ba9qfxfl5c4cwl2ln5jdbvid98cryj175g0nbmx7b"; depends=[DBI RMySQL tframe TSdbi TSsql]; }; - TSP = derive2 { name="TSP"; version="1.1-7"; sha256="0rxxhvqi55869dg2p82hzg5kvgcqf9h60cjcg00k3pv9aw4x07kb"; depends=[foreach]; }; + TSP = derive2 { name="TSP"; version="1.1-8"; sha256="0g44f2a4m7rfx6y51cdbr6vcmmpbwgyzpvfjksq3lb7gcpbr7xrx"; depends=[foreach]; }; TSPostgreSQL = derive2 { name="TSPostgreSQL"; version="2015.4-1"; sha256="11201zpbrva6gwc9hg8pynadrps6d8pb3syzba9nyjpv2ck6x3ry"; depends=[DBI RPostgreSQL tframe tframePlus TSdbi TSsql]; }; TSPred = derive2 { name="TSPred"; version="4.0"; sha256="0zjx33llkvvj7m4z16crybw0y6s6zvlblxn2in3j7v9cv0ihhsa8"; depends=[EMD forecast KFAS MuMIn vars wavelets]; }; TSS_RESTREND = derive2 { name="TSS.RESTREND"; version="0.2.13"; sha256="0wbwkhc1b5dql87sj1441cknidpgwcflwlid2yj6d64a6wsipn1l"; depends=[bfast broom ggplot2 RcppRoll strucchange]; }; @@ -4570,7 +4571,7 @@ in with self; { TauStar = derive2 { name="TauStar"; version="1.1.4"; sha256="06bb6570mqzfbjw2qp4bjl4a1bdpwsvcr0vw2y4l1x444m670ds1"; depends=[Rcpp RcppArmadillo]; }; TaxicabCA = derive2 { name="TaxicabCA"; version="0.1.1"; sha256="0izjf6vrdjvs9axvafr2mamr157i8w6d7m5sfjch1p5c174cpr9c"; depends=[]; }; Taxonstand = derive2 { name="Taxonstand"; version="2.2"; sha256="1cpx5mp17l9gjvb60f0ypm8r8b69ff520p67jac8y6rvw8aqhc6j"; depends=[pbapply]; }; - TcGSA = derive2 { name="TcGSA"; version="0.12.4"; sha256="1kqgmmrkwy5idr77r3grq76km6bvi2003a148kjmdmi688jjkc2g"; depends=[cluster cowplot ggplot2 gplots GSA gtools lme4 multtest reshape2 stringr]; }; + TcGSA = derive2 { name="TcGSA"; version="0.12.7"; sha256="0l28sldpavyvhm9hab9gb7i7rmlxpj7ivffi6xx8lg7qjn6d21v5"; depends=[cluster cowplot ggplot2 GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; TeXCheckR = derive2 { name="TeXCheckR"; version="0.6.0"; sha256="1qrzslcipg3j1317dhizxhcxyx2dpx7jh91vkms10wgc6vpqgrw4"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; TeachBayes = derive2 { name="TeachBayes"; version="1.0"; sha256="1mfhlkm7wp2i4hvc63xzfyw3q4z1xhlbi933pkqkbrhih94z4rz7"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; @@ -4584,7 +4585,7 @@ in with self; { Ternary = derive2 { name="Ternary"; version="1.1.3"; sha256="1hpm6ybksyizzkpig88jczj58kzgc82dmm22wy61hqhlbs4pmj1z"; depends=[viridisLite]; }; TestCor = derive2 { name="TestCor"; version="0.0.1.1"; sha256="1rxw5rz687ax3zlpaxb9bak6dd2jdl49h3fdzbz7r8vycwanwydq"; depends=[MASS Rcpp]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.1"; sha256="10b1g9m2s6nbs8lrpcx3s1jf0fmqyd07mg3vx1pnma8r3vwy1yh7"; depends=[Amelia mice]; }; - TestDesign = derive2 { name="TestDesign"; version="1.0.0"; sha256="0jl65fv5iafpnm3xbi1wf676qdyk329cqm6c9zw9gzzbwc7f2pb7"; depends=[crayon foreach logitnorm lpSolve Matrix Rcpp Rdpack]; }; + TestDesign = derive2 { name="TestDesign"; version="1.0.1"; sha256="0d4j4ck4w2hhdmbp0cjp483xxgw0dhf226mbrkhfaimr2nddfbpl"; depends=[crayon foreach logitnorm lpsymphony Matrix Rcpp Rdpack]; }; TestDimorph = derive2 { name="TestDimorph"; version="0.2.9"; sha256="0f2np7rqlcqxj2x1lwx6fryvdizan21j9962i51yi9b6pvkbpn6h"; depends=[caret corrplot DescTools dplyr ggplot2 klaR MASS mda multcompView plotROC plyr purrr randomForest reshape2 Rfast rlang stringr tibble tidyr tmvtnorm truncnorm]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; TestScorer = derive2 { name="TestScorer"; version="1.7.2"; sha256="006c3g3gx55mfr93srldwvgz5vm6nkr3f57yi4qg6krn0d32865f"; depends=[]; }; @@ -4680,6 +4681,7 @@ in with self; { UScensus2000cdp = derive2 { name="UScensus2000cdp"; version="0.03"; sha256="143hqnzdla3p31n422ddzaaa34wc6xnnhil4y53m4qydyg407700"; depends=[foreign maptools sp]; }; UScensus2000tract = derive2 { name="UScensus2000tract"; version="0.03"; sha256="11ppw75k8zghj7xphx5xyl3azsdsyd142avp0la2g941w6f8l2n1"; depends=[foreign maptools sp]; }; UScensus2010 = derive2 { name="UScensus2010"; version="0.11"; sha256="1q06spkh8f4ijvfg557rl3176ki4i8a1y39cyqm3v7mnzwckyj3l"; depends=[foreign maptools sp]; }; + USgrid = derive2 { name="USgrid"; version="0.1.0"; sha256="0kdbq1vbqcm0avzy2y8g8xk56bp8qnqpc1zfqspkwl6a0gzzfjxz"; depends=[tsibble]; }; UStatBookABSC = derive2 { name="UStatBookABSC"; version="1.0.0"; sha256="16r6clhfaalfsg5hmvzm8a128zygxax5hyc0vr1q9bsw9hj7cs0c"; depends=[]; }; UWHAM = derive2 { name="UWHAM"; version="1.0"; sha256="1qaj8anaxqnx4nc6vvzda9hhhzqk9qp8q7bxm26qgia4hgascnrv"; depends=[trust]; }; UdderQuarterInfectionData = derive2 { name="UdderQuarterInfectionData"; version="1.0.0"; sha256="084bq5ai1ccp4www64z0ipic74zkd8j1ygv0py900164a25wdr9b"; depends=[]; }; @@ -4699,7 +4701,7 @@ in with self; { UpSetR = derive2 { name="UpSetR"; version="1.4.0"; sha256="007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-6"; sha256="1lr8z45r5s7fxrd42rswm6w7s3k5nds244b9d525jb5v4n8w9kpw"; depends=[HistData Hmisc MASS]; }; UtilityFrailtyPH12 = derive2 { name="UtilityFrailtyPH12"; version="1.0"; sha256="06f5gmwwk1r14ab6v5jcxz0pmdph7ffi4y57mjg9byn7pjnibflk"; depends=[bindata mvtnorm Phase123 Rcpp RcppArmadillo]; }; - V8 = derive2 { name="V8"; version="3.0"; sha256="07xmhmqbw0pvsc3vwpdkkx0j7f3nbgwlg7fii93gfrixxn8sjs1r"; depends=[curl jsonlite Rcpp]; }; + V8 = derive2 { name="V8"; version="3.0.1"; sha256="0xkyja3722qbs2ndyw3171yfsakijnydm2bfqv76cf0gbzxdab5b"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; VARSEDIG = derive2 { name="VARSEDIG"; version="1.9"; sha256="18j73wm22bjvf2y0c09bfmdyx4x2gd0jhfcqhbk1sgsk24zjr63z"; depends=[]; }; VARshrink = derive2 { name="VARshrink"; version="0.3.1"; sha256="09hysmxxawcbyfx6bia546aqydryl2r5p3ai7bvl6ghdckw5mnpl"; depends=[ars corpcor MASS mvtnorm strucchange vars]; }; @@ -4999,7 +5001,7 @@ in with self; { airportr = derive2 { name="airportr"; version="0.1.3"; sha256="1h8h0cdfqgxv8cf9hp82sx5n4a1z88qyyxicj7d2kmmybqqz2r5n"; depends=[dplyr]; }; airr = derive2 { name="airr"; version="1.2.0"; sha256="1vswbjmyhygmyqymkfxad9nwsbcgaggian1fyrx63w0y9c4dfv1h"; depends=[readr stringi yaml]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; - akc = derive2 { name="akc"; version="0.9.1"; sha256="034hm328fflpr9ppgr87sbwxj9hrmynq86c9nawwjlkv4daw9j7i"; depends=[data_table dplyr ggforce ggplot2 ggraph igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; + akc = derive2 { name="akc"; version="0.9.3"; sha256="15sams52pzf5d0b1nmixff9xddgl1c1xdni9s1vfj0vnrf64kkn1"; depends=[data_table dplyr ggforce ggplot2 ggraph igraph magrittr rlang stringr textstem tibble tidygraph tidytext widyr]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; akmedoids = derive2 { name="akmedoids"; version="0.1.5"; sha256="0yn5rjgb5rrhphgbjn49098ybkmzda6yxzfqgbsppfgjidrafhza"; depends=[ggplot2 Hmisc kml longitudinalData reshape2 signal]; }; @@ -5030,9 +5032,9 @@ in with self; { alr3 = derive2 { name="alr3"; version="2.0.8"; sha256="1vkwgf5c9zb8pphcw47vfwwk12nfj4nggj8dr88jwbdnv7yd257h"; depends=[car]; }; alr4 = derive2 { name="alr4"; version="1.0.6"; sha256="0v98yzi0fcjxq0ak0w05001h8m9nfa9l0ann9bqvz8bwcmb3jlr2"; depends=[car effects]; }; altR2 = derive2 { name="altR2"; version="1.0.0"; sha256="15nvbq3n76p2857ipyf3q6rs2mwjqsp9gr3rmzbjfm8lrj0faxsv"; depends=[gsl purrr]; }; - altair = derive2 { name="altair"; version="3.1.1"; sha256="0qy23lzz2lfsrhl9yn195r5gdkspgi99zlp13l1fpcw0d02diw1z"; depends=[assertthat htmlwidgets jsonlite magrittr repr reticulate rlang vegawidget]; }; + altair = derive2 { name="altair"; version="4.0.1"; sha256="0s3pvlh6y4h3ni5m8yli6gp6gps7pcpndag40ckr31302ai3bxvq"; depends=[assertthat htmlwidgets magrittr repr reticulate vegawidget]; }; alterryx = derive2 { name="alterryx"; version="0.5.0"; sha256="1p9q4244bm7hf6my8q951idw41xa5gcrdl7znmsng9pwxh8dnz3h"; depends=[base64enc digest httr jsonlite]; }; - altmeta = derive2 { name="altmeta"; version="2.2"; sha256="1k3p06v8ccj0dbjfpl4nw6579bwcy4j925rk15v55khqmrlx780l"; depends=[]; }; + altmeta = derive2 { name="altmeta"; version="2.3"; sha256="0fcd2pzp62871b37fcwz1zcidch5akj6a5npcvwzg4zwp8i9rmyl"; depends=[coda rjags]; }; amap = derive2 { name="amap"; version="0.8-18"; sha256="0zpcb73w413na23f6giml9311jh0j0y766w2fh9i40d2h7bbvyvs"; depends=[]; }; amber = derive2 { name="amber"; version="0.1.6"; sha256="0n9idgmkqnnsajybkbgczlrr1hyj5z98rixk451lh1r1j2cv8252"; depends=[classInt doParallel foreach Hmisc latex2exp ncdf4 raster rgdal rgeos scico sp viridis xtable]; }; ambhasGW = derive2 { name="ambhasGW"; version="0.0.2"; sha256="0v517i4whip45pk6bwlwval9pz367pcgzz62b2z22mrwgi6m6bck"; depends=[raster rgdal yaml]; }; @@ -5117,7 +5119,7 @@ in with self; { aptg = derive2 { name="aptg"; version="0.1.0"; sha256="06z8041h1k9v0ymd7azn11xzhqxb8lda4r7nyg51h8z3i8mpq1ba"; depends=[ape brranching phytools taxize xml2]; }; apyramid = derive2 { name="apyramid"; version="0.1.0"; sha256="0r0mx5m3jwjdw0npvlch4h6n73sy277wzcrffm6zz0ki9rkm0can"; depends=[dplyr forcats ggplot2 glue rlang scales tidyselect]; }; aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; - aqp = derive2 { name="aqp"; version="1.18.1"; sha256="08mvh65b4i2dcrx4a4is4qpbmxdnzy2212b72l3xq6yppdzl2fhl"; depends=[cluster digest lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.19"; sha256="1z5qbzhsn79xz17i53hy48xnwf64k5cc24jxwvysyv8p2ylrir0i"; depends=[cluster digest lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; ar_matrix = derive2 { name="ar.matrix"; version="0.1.0"; sha256="1d531hkl50szfa1q0zbp8dp1a9jli63kwvxjgc9n0ar279y47qdz"; depends=[MASS Matrix sp sparseMVN]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; @@ -5229,7 +5231,6 @@ in with self; { attachment = derive2 { name="attachment"; version="0.0.9"; sha256="0z47v5nqvw0grgll2bl66zy82igg1ncy78jm9dwv45yd4dl2xi10"; depends=[desc devtools glue knitr magrittr rmarkdown stringr]; }; attempt = derive2 { name="attempt"; version="0.3.0"; sha256="1q0r4r0hirw2kxsvcq5rqkmbxzi7fa6fxaqi6rmzwiz25025iv71"; depends=[rlang]; }; attenuation = derive2 { name="attenuation"; version="1.0.0"; sha256="0ys4psvkvimmym4qj9cmhq8y7x10kv0x6bsvpjkrsc3l8p2g3474"; depends=[]; }; - attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; }; atus = derive2 { name="atus"; version="0.2"; sha256="1i67rx8p5v4shgbfcym4lbnlw55xx7w2fdzhgsgjjyfpwbpm7h4h"; depends=[]; }; auRoc = derive2 { name="auRoc"; version="0.2-0"; sha256="1q5cpa1y96bs5x0vifi0h6ca4yasg3z57yhq29vicd433h3phy3x"; depends=[coda MBESS ProbYX rjags]; }; aucm = derive2 { name="aucm"; version="2019.12-1"; sha256="1vjb5jiq2iz6c8nhfcbqg21nms7nf485xlrgd7mdkbzvqxxl43h6"; depends=[kyotil]; }; @@ -5288,7 +5289,7 @@ in with self; { backpipe = derive2 { name="backpipe"; version="0.2.3"; sha256="12k2cv9x8h0b002m9c8g4vj5a7chp4b8jqz377ia0diqw89dydpm"; depends=[]; }; backports = derive2 { name="backports"; version="1.1.5"; sha256="0k19w68b2aihyj5mflw3732gkkzs78sssqdns960pdw3yfnkiv33"; depends=[]; }; backtest = derive2 { name="backtest"; version="0.3-4"; sha256="1s0mf247dz2vvyf4m3sp9xiqhv7xcs4rphyg9gdcy73060sah2ad"; depends=[lattice]; }; - bacondecomp = derive2 { name="bacondecomp"; version="0.1.0"; sha256="120whsc3sjwq4y30kk81k2lkcqwpvzcd3z44xkl8nlfzd2gn20w3"; depends=[]; }; + bacondecomp = derive2 { name="bacondecomp"; version="0.1.1"; sha256="1sd6pbhmx8vxz5c2cvvadbjy7p15y91gzs3n0ish7h5br1vq8fpm"; depends=[]; }; bacr = derive2 { name="bacr"; version="1.0.1"; sha256="14zr1v4rihx0ra3x0vsb81vsz0g8gzskkdxkg7nhiz835hp2fiy8"; depends=[MCMCpack]; }; badgecreatr = derive2 { name="badgecreatr"; version="0.2.0"; sha256="0mdixklaxky5gs8zm99ky280vxxlbq1mxnaarq6x0d1cb71bzv4l"; depends=[git2r]; }; badger = derive2 { name="badger"; version="0.0.7"; sha256="1djgzn6ixfsdr0v4f3714mv2z2kl776dd2hq670g7bla4lp6344s"; depends=[desc dlstats rvcheck]; }; @@ -5304,6 +5305,7 @@ in with self; { bamboo = derive2 { name="bamboo"; version="0.9.24"; sha256="1fw1wniba0kxb44d2w9r9nh5sy1jhrk48bn0zblz2y6gvwn8m2vn"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.3.2"; sha256="11v9hy8ijbcqhwim0s3y69dz11jvys4vjvfnshj4p5qdz38sji6l"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; bamlss = derive2 { name="bamlss"; version="1.1-1"; sha256="06i0yfmq5k98yqs8mfw3ppkanlp34v18fb1xynxaxwgj9d58h5k3"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; + bamp = derive2 { name="bamp"; version="2.0.8"; sha256="0p7vi9gqplqnrc0vl55m1xx160k5kdxs4sxqxyrg908yhsnr5vj6"; depends=[abind coda]; }; banR = derive2 { name="banR"; version="0.2.1"; sha256="0bqy8srxsd0r872scpij8lyrvb0n8jicwpvf9wh1xk1bjmlq3vb5"; depends=[dplyr httr magrittr purrr readr rlang tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; bang = derive2 { name="bang"; version="1.0.0"; sha256="16wy2imrdvhpdzi6ix9k69afqdyc44d1xr655yd3q1cl12x1nr04"; depends=[bayesplot rust]; }; @@ -5343,8 +5345,6 @@ in with self; { bayes4psy = derive2 { name="bayes4psy"; version="1.2.0"; sha256="0dv285nq44a971hyha8rkynac3gaq78pp5bicmznxds53lhnw2ji"; depends=[BH circular cowplot dplyr emg ggplot2 mcmcse metRology Rcpp RcppEigen reshape rstan rstantools StanHeaders]; }; bayesAB = derive2 { name="bayesAB"; version="1.1.2"; sha256="0xg29s3h4dy43snlc365q80ix96hwh4mfy1qvv87yys3i9zfinm5"; depends=[ggplot2 Rcpp rlang]; }; bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; }; - bayesCT = derive2 { name="bayesCT"; version="0.99.1"; sha256="1ylv7l4rs4sb7lld6m2w02xg9g26fm8z9jdrszbjc18z1f4bm78j"; depends=[bayesDP dplyr magrittr purrr]; }; - bayesDP = derive2 { name="bayesDP"; version="1.3.2"; sha256="1xv133v01mbfsy0w5acc9819m92dcxfdjg4a8p7kdfkycz4ilwnl"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; @@ -5418,7 +5418,7 @@ in with self; { beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; }; beadplexr = derive2 { name="beadplexr"; version="0.2.0"; sha256="0ci19jai28hizcfdgj3a69vw20yk25xg6vp6fk1xhkkp0hh9wnd2"; depends=[cluster dplyr drc flowCore fpc ggplot2 lazyeval magrittr mclust purrr raster tibble tidyr yaml]; }; - beam = derive2 { name="beam"; version="1.0.2"; sha256="1gxgw4gcrlbxmlv5scddr6qh4df9xaj6zbs48k660qqn02gjxy9b"; depends=[fdrtool igraph knitr Matrix]; }; + beam = derive2 { name="beam"; version="2.0.0"; sha256="1b61cabaw3pixzmzsrxh4mnbdrnxfd7ffyibn3kgk1dr0sc9d1da"; depends=[assertthat BH fdrtool igraph knitr Matrix Rcpp RcppArmadillo]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.4"; sha256="18i4ygz83l60fdfkl4yg9kp5n2vmqn6yd7qkpkiplq0mzg5s4nk9"; depends=[BH loo Rcpp RcppEigen rstan rstantools StanHeaders survival]; }; beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; @@ -5569,6 +5569,7 @@ in with self; { bipartite = derive2 { name="bipartite"; version="2.14"; sha256="0wy7ciw59b7z2gzp5qiphss9p208qf6dyprl59nksb462fg4rxyq"; depends=[fields igraph MASS permute sna vegan]; }; bipartiteD3 = derive2 { name="bipartiteD3"; version="0.2.0"; sha256="1jvhlycmxii4vcm9qbj246qkwhd1bcggqq56b5rmbyqwd4vhqh8f"; depends=[downloader dplyr purrr r2d3 RColorBrewer stringr tibble tidyr]; }; biplotbootGUI = derive2 { name="biplotbootGUI"; version="1.2"; sha256="07lrs2n6s54h97vjriszszhksdbi14s2i234kwfhg7aq47k6l0jl"; depends=[cluster dendroextras MASS matlib rgl shapes tcltk2 tkrplot]; }; + birankr = derive2 { name="birankr"; version="1.0.0"; sha256="004ckrr9jiclh1wfzchrv2s1b33y9lv465kx1jb2q4pr2m1j027c"; depends=[data_table Matrix]; }; birdring = derive2 { name="birdring"; version="1.4"; sha256="0rskrf0r5nrzfcac0zvc60vabvs9dws2zx1rxssvw6xmwyiiy1z6"; depends=[geosphere ks lazyData raster rgdal rgeos rworldmap rworldxtra sp]; }; birk = derive2 { name="birk"; version="2.1.2"; sha256="07ck59m5mw897a60vmdn1b3qrmqj20qpfsn3093haqbpn8z13dmn"; depends=[]; }; birtr = derive2 { name="birtr"; version="1.0.0"; sha256="0bcxvj30wzwclw1lcyhvwj3k7awd39lrvzia1nrg53hw90bfs811"; depends=[]; }; @@ -5648,7 +5649,6 @@ in with self; { bold = derive2 { name="bold"; version="0.9.0"; sha256="0ppdhbpdffvs0sgh7ykkhr585nhk66w6vqw793wa4ia57yl49s25"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; bomrang = derive2 { name="bomrang"; version="0.7.0"; sha256="0xlsivhnank7bc3y06wk5avlzlc24mfvn9c18rhgxxib8mzf8aak"; depends=[crayon curl data_table dplyr foreign hoardr httr janitor jsonlite lubridate magrittr raster readr rgdal rvest tidyr xml2]; }; bookdown = derive2 { name="bookdown"; version="0.17"; sha256="10b4gnd6z3w13pysqqan43blxcbk7bgbzc7wr83b23ag1lh2n40j"; depends=[htmltools knitr rmarkdown tinytex xfun]; }; - bookdownplus = derive2 { name="bookdownplus"; version="1.5.7"; sha256="1y3iiw3grs6h3ppar1yjmha0nbp19naiirj0hvzgi4yhnibf7nid"; depends=[bookdown knitr magick xaringan]; }; boostmtree = derive2 { name="boostmtree"; version="1.4.1"; sha256="16adb9akrdw1cfcarrv9l5cxhn1nzskir6nwl9nawl1r727s57z6"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-24"; sha256="0yv0l55kjmlfdx1xhgyjdi0bskxhfal74wr5jxaib1qj99nmkm49"; depends=[]; }; @@ -5659,7 +5659,7 @@ in with self; { bootSVD = derive2 { name="bootSVD"; version="0.5"; sha256="14xwbrpqj3j1xpsppgjxpn9ggsns2n1kmni9vn30vgy68zwvs2wy"; depends=[ff]; }; bootStepAIC = derive2 { name="bootStepAIC"; version="1.2-0"; sha256="0p6v4zjsaj1p6c678010fazdh40lpv0rvhczd1halj8aic98avdx"; depends=[MASS]; }; bootcluster = derive2 { name="bootcluster"; version="0.1.0"; sha256="1mx08p0csz06mq55bdg4vgnqa9khdgqrz4jnm48c24pg8rpaj98b"; depends=[cluster flexclust fpc mclust plyr sets]; }; - bootnet = derive2 { name="bootnet"; version="1.2.4"; sha256="152zgkk7lw0cjvsrnqbb2j4hlvfdy7n6j63xjpn5sjxyal69inp2"; depends=[abind BDgraph corpcor dplyr ggplot2 glasso graphicalVAR gtools huge igraph IsingFit IsingSampler lavaan Matrix mgm mvtnorm NetworkToolbox networktools parcor pbapply psychTools qgraph relaimpo tidyr]; }; + bootnet = derive2 { name="bootnet"; version="1.3"; sha256="0173xv22p25gm9hnwhh9wkq7ygxz5lkpsakhbv63v36qrlyfw9al"; depends=[abind BDgraph corpcor dplyr ggplot2 glasso graphicalVAR gtools huge igraph IsingFit IsingSampler lavaan Matrix mgm mvtnorm NetworkToolbox networktools parcor pbapply psychTools qgraph relaimpo tidyr]; }; bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; bootsPLS = derive2 { name="bootsPLS"; version="1.1.2"; sha256="19ikz3l0qds25hgcxvhsvqy6jyshcdvnxw6774ifl9ylngxvlfh0"; depends=[mixOmics]; }; bootspecdens = derive2 { name="bootspecdens"; version="3.0"; sha256="0hnxhfsc3ac4153lrjlxan8xi4sg1glwb5947ps6pkkyhixm0kc1"; depends=[MASS]; }; @@ -5749,11 +5749,11 @@ in with self; { bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; bundesbank = derive2 { name="bundesbank"; version="0.1-9"; sha256="05sc6m2v8bfgdka7v28rxhq5a8c88gsxkv0zjk08rpw8k8zql0dk"; depends=[]; }; bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; }; - bupaR = derive2 { name="bupaR"; version="0.4.2"; sha256="0fg16lw3liwmp1y92ky32wq18lfzn8psn2sqfja0322q6b34fgjk"; depends=[data_table dplyr eventdataR forcats glue magrittr miniUI purrr rlang shiny tidyr]; }; + bupaR = derive2 { name="bupaR"; version="0.4.3"; sha256="1041agc2bxwdxham850ac9lirrirba057ghi2h33mcmba8k5a1i2"; depends=[data_table dplyr eventdataR forcats glue lubridate magrittr miniUI purrr rlang shiny stringr tidyr]; }; burnr = derive2 { name="burnr"; version="0.5.0"; sha256="19kkk4cyd7h3idn8di77426lcmq2jkxaksbpvg87hpkn72vcr8y5"; depends=[ggplot2 MASS plyr reshape2]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; busdater = derive2 { name="busdater"; version="0.2.0"; sha256="0hib73zay9r7rv49zv1lx0l15jzjyli9f1vrk414l8apggvx4c6s"; depends=[lubridate]; }; - butcher = derive2 { name="butcher"; version="0.1.1"; sha256="0ds4k5yj4i2dj3zd35xgsz9h3scsrirndggz7arjwgfax9cnwidh"; depends=[fs lobstr modeldata purrr rlang tibble usethis]; }; + butcher = derive2 { name="butcher"; version="0.1.2"; sha256="0z3rpjvrr42j1qqzmadigcq2ivqd40dhz7yymjmbap9nbz26rb3l"; depends=[fs lobstr modeldata purrr rlang tibble usethis]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; bvartools = derive2 { name="bvartools"; version="0.0.2"; sha256="16wa2bnm91764xspgvswvl3ylv0s3x5f734scw9x0zjy9q72b05h"; depends=[coda Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; @@ -5777,7 +5777,7 @@ in with self; { cPCG = derive2 { name="cPCG"; version="1.0"; sha256="1pfbsv2rcjsryn6nr56a7i4yb7k0m3gdfn4q9l1kpzhmv9lic7m1"; depends=[Rcpp RcppArmadillo]; }; cRegulome = derive2 { name="cRegulome"; version="0.3.1"; sha256="0j3rv7vakv27r1n1yxmd50nlnyc4y329w0dmrw56dwkdkk4zzbsg"; depends=[DBI ggplot2 ggridges httr igraph R_utils RSQLite UpSetR VennDiagram]; }; cSEM = derive2 { name="cSEM"; version="0.1.0"; sha256="1vqqlajyvcwk0nd546kq03x14vi7iq9bs2mq2zlp571v7g5gmfi1"; depends=[abind alabama cli crayon expm future future_apply lavaan magrittr MASS Matrix matrixcalc matrixStats polycor psych purrr Rdpack symmoments]; }; - ca = derive2 { name="ca"; version="0.71"; sha256="1ywqvj0rc9ss7yim4x09yf6l80xz4y6ggl56m0c1hc9x6wxna7h2"; depends=[]; }; + ca = derive2 { name="ca"; version="0.71.1"; sha256="095lk7p2b9835hc3a03c4019wg0baf0dhz6c2vqpaq1m9k4jy304"; depends=[]; }; caMST = derive2 { name="caMST"; version="0.1.3"; sha256="1hhxyw7sbzm2v09xaxvq347gl8p5wkjxx43187mqbw0nzknlg5bg"; depends=[catR diagram mstR]; }; caRamel = derive2 { name="caRamel"; version="1.1"; sha256="06nppjx66xwdqchna5j6xlhfzs5g36nv8srwivbnfixys29awabb"; depends=[geometry]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; @@ -5796,7 +5796,7 @@ in with self; { calibrate = derive2 { name="calibrate"; version="1.7.5"; sha256="1s423nr176l2sc66wp7hzgqkv7c2bq8d2bjrrvrrm5qa9y3zdx1k"; depends=[MASS]; }; calibrateBinary = derive2 { name="calibrateBinary"; version="0.1"; sha256="1k6sl4bg05piyczpk6wsva914gcmy8viyz4423gx9i6ddflb7xdb"; depends=[gelnet GPfit kernlab randtoolbox]; }; calibrator = derive2 { name="calibrator"; version="1.2-8"; sha256="1m9g1pmnr6d9jkg5ab0l0cbqfj7kmx7sdmcdqdhn9ifyhhn7812y"; depends=[cubature emulator mvtnorm]; }; - callr = derive2 { name="callr"; version="3.4.0"; sha256="1hvxw2glizq8g0qnxakcxh8jc5scn0hp1x8i70fdpqwwbgx49slr"; depends=[processx R6]; }; + callr = derive2 { name="callr"; version="3.4.1"; sha256="0nyba0knzd44zz2xmr7zd9qh3rny0q8msysxf49843d9rlyv6y70"; depends=[processx R6]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; calpassapi = derive2 { name="calpassapi"; version="0.0.2"; sha256="0i81ffdfw3m15cfbag3l9s245dyhapqhy7adb3228vam3qp3n59b"; depends=[digest dplyr httr jsonlite stringr]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; @@ -5820,6 +5820,7 @@ in with self; { car = derive2 { name="car"; version="3.0-6"; sha256="0yv5mwaa0ymrbis9590mx0zcj3w6j4drhs6ab13zhx4zc3x1b7b6"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; carData = derive2 { name="carData"; version="3.0-3"; sha256="0cg2yxzn0pdjqykr60my1fzpfkqac21fll5hv3m9w5c9sayq8swq"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; + caracas = derive2 { name="caracas"; version="0.0.1"; sha256="1pn6qf6m32psylnw1rnp2pdkwpsa5jz0lhfwj5c0ll23a8ln7627"; depends=[reticulate]; }; carat = derive2 { name="carat"; version="0.1.0"; sha256="09vqcljl74x6qbk88mf9xnp1hwzg1mwvmxi43gmw8qcg13zcfiai"; depends=[ggplot2 gridExtra Rcpp RcppArmadillo stringr]; }; carbonate = derive2 { name="carbonate"; version="0.1.2"; sha256="1v4ssdk7j60sm4iahywb4x710ijvzj0yczcmr75zvq9rjfki1b54"; depends=[clipr httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; @@ -5900,7 +5901,7 @@ in with self; { cdcfluview = derive2 { name="cdcfluview"; version="0.9.0"; sha256="0i6jipzpfcqs48w0cwjyynf3lpdppa7xh27q1rwv3jsqd246880v"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="2.0.3"; sha256="0hv52valyig3zzywm3058c5nxb2n7y3j2vfibxdbfg8414wwapd9"; depends=[ks mvtnorm Rcpp]; }; cde = derive2 { name="cde"; version="0.4.1"; sha256="19aifi2wh3hi929bf15v96z6gbzawgawjdipvx1v95krzij8fl2n"; depends=[data_table viridisLite]; }; - cder = derive2 { name="cder"; version="0.2-1"; sha256="15gm2869dgnvwmdl6zbqb3aa2ngmnqmkjz6hapff1s09y3vwhq52"; depends=[curl dplyr glue lubridate readr rlang stringr tibble]; }; + cder = derive2 { name="cder"; version="0.2-2"; sha256="0aw2c170sqx2y4iz16avqijahwxlsaz590mxvsx4bicfd8nrcynk"; depends=[curl dplyr glue lubridate readr rlang stringr tibble]; }; cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.2"; sha256="094mk2hvxww2lndx5wkw368ynqx6klbdwl30d1yv7kqmr2yy7388"; depends=[Formula MASS pracma]; }; cdlTools = derive2 { name="cdlTools"; version="0.14"; sha256="0zf00y8qcklz2yp7vx6mjvx2h2p4kq44r51z4qy88kq9v62rqz3k"; depends=[httr raster]; }; cdom = derive2 { name="cdom"; version="0.1.0"; sha256="00xqqqhskjlkz8ii7kqyabxk8995w7g9jiz1isyqjpwg8nsa3x28"; depends=[broom ggplot2 minpack_lm tidyr]; }; @@ -5958,7 +5959,7 @@ in with self; { changepointsHD = derive2 { name="changepointsHD"; version="0.3.3"; sha256="1wdhmkg21kb5jd95a0aqqp2qgdkndc69rbdxjf792gq8f1rigarh"; depends=[Rcpp RcppArmadillo]; }; changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; }; changer = derive2 { name="changer"; version="0.0.3"; sha256="1pmnspadkshz7z9f275vks1xjh6a9k37h7j51dqdjrqilzq7y6sf"; depends=[available devtools git2r]; }; - charlatan = derive2 { name="charlatan"; version="0.3.0"; sha256="1i8n6kmdv8f2mnd626qja979qx35fdl1a8r9akgqznh5bhjqiq42"; depends=[R6 tibble whisker]; }; + charlatan = derive2 { name="charlatan"; version="0.4.0"; sha256="0hrc4kdympi05j6gx0x6vy4jb1mvxxi7pcrnpzcp8vxvd6r3wjmq"; depends=[R6 tibble whisker]; }; chartql = derive2 { name="chartql"; version="0.1.0"; sha256="108csn7q8qrjhiss54f5bliv3av7psq7kfryspajbdb6wm9ciz3p"; depends=[ggplot2 stringr]; }; cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; }; chebpol = derive2 { name="chebpol"; version="2.1-2"; sha256="126cgqnl9jy332q0ywg9dr11d4q1aichwwakb1xcrxrqw2j26zzi"; depends=[geometry]; }; @@ -5967,7 +5968,7 @@ in with self; { checkmate = derive2 { name="checkmate"; version="1.9.4"; sha256="08ddpgs4mv5d5y4j054pm8drmxkn7yvhfpbghwxlizjpnxa5g8ps"; depends=[backports]; }; checkpoint = derive2 { name="checkpoint"; version="0.4.8"; sha256="0j5z6kmpfns8i28bkdbmwcmbv8cxmfws9d57kv3g1g3km2fmiwcl"; depends=[]; }; checkr = derive2 { name="checkr"; version="0.5.0"; sha256="14hkpfbw5ibdwz2jygir2f2bb2qgrj62gn3449n4dif31nswaj2f"; depends=[err]; }; - cheese = derive2 { name="cheese"; version="0.0.1"; sha256="0yjb68qlz62vmvjf6c8qfblihkkigfbhxpw42mm6qdy4f483mpr2"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + cheese = derive2 { name="cheese"; version="0.0.2"; sha256="08947y0zh3kp4ggvbrv7rl5rgj3yhmdwpbbkg8vd0hmbyz8vycc0"; depends=[dplyr forcats kableExtra knitr magrittr purrr rlang stringr tibble tidyr tidyselect]; }; chemCal = derive2 { name="chemCal"; version="0.2.1"; sha256="1kq82x57qm68im6lyqjqmh4p34s4y7fn5v6ymclxjr47mdv8npb5"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; @@ -5979,6 +5980,7 @@ in with self; { childesr = derive2 { name="childesr"; version="0.1.2"; sha256="170xjsk0sjwlw3w3nf9jmq4yd6ivbznmjhqq2np5grn1rwlswawb"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; childhoodmortality = derive2 { name="childhoodmortality"; version="0.3.0"; sha256="1ixd10jyzgr1ssnjas35kngpsqyjzl73wwpvcspv06cn12sv2b8d"; depends=[dplyr matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.7.4"; sha256="1dyzidmbr7608y65kymf7x5s19qjsz9hxzfv51ml1kaymml1hbf3"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr purrrlyr reshape2 tibble tidyr VGAM]; }; + chilemapas = derive2 { name="chilemapas"; version="0.1.4"; sha256="1y873bb94chjkskzbj1k8dh7jvcx1qsifafaqkp3544y7si1l0lv"; depends=[dplyr magrittr rlang rmapshaper sf stringr]; }; chillR = derive2 { name="chillR"; version="0.70.21"; sha256="0sj97c4sgmywr5fl5csjyk9g6sy4a6vw2ryvg0idsfidklrdfvxd"; depends=[assertthat dplyr fields ggplot2 httr jsonlite Kendall pls plyr R_utils raster RCurl readxl reshape2 rlang RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.2.1"; sha256="17sffxjpga8mq8xfxhas9jqj71bb80ayz4m2dgnmg1w6bb3p7bsp"; depends=[jiebaR Matrix NLP purrr slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; @@ -6005,7 +6007,7 @@ in with self; { chunked = derive2 { name="chunked"; version="0.4"; sha256="0pqk6nnxxnlsw9zal62ajjalrlmvkdrzyz2l8r10jd7s61vhra40"; depends=[DBI dplyr LaF lazyeval]; }; ciTools = derive2 { name="ciTools"; version="0.5.1"; sha256="02jgi09vkzsan47mvg65ciqc1q4vmrl14v2i5bsaqxbvxwd65lww"; depends=[arm boot dplyr lme4 magrittr MASS survival tibble]; }; cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; - cimir = derive2 { name="cimir"; version="0.3-0"; sha256="1xin8alkv5nzmiz41r3d96aihj2234087b6mr4i896p5agm26fva"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; + cimir = derive2 { name="cimir"; version="0.4-0"; sha256="0sp8hd354hnrmbyn3gm2sgvkf32n7kqpg9bc56583ibyfc8s4gwm"; depends=[curl dplyr glue jsonlite purrr rlang stringr tidyr]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; cinterpolate = derive2 { name="cinterpolate"; version="1.0.0"; sha256="1aw6hs41xin2hhgmi4pr5510v4sn6x735lachpc5gpbxch5h3f82"; depends=[]; }; cir = derive2 { name="cir"; version="2.0.0"; sha256="0ycjnbikpyhcfdik7c5knw4s9gl8y5h4219c4fhs4axs04np004v"; depends=[]; }; @@ -6041,7 +6043,7 @@ in with self; { cleanNLP = derive2 { name="cleanNLP"; version="3.0.0"; sha256="15prwj32rq28dqqpfagaq4vfbimjws7ldrjm7waf4w6rcavz7r93"; depends=[Matrix reticulate stringi udpipe]; }; cleancall = derive2 { name="cleancall"; version="0.1.1"; sha256="1gq7bjywgslybfk97k3fxglp6j78a0cklaammccvffs3b94i4zh4"; depends=[]; }; cleandata = derive2 { name="cleandata"; version="0.3.0"; sha256="1lm7k25j16p888xvd7rzzd3sb3namzjlpjn22xmmpzlzyl0h7dhk"; depends=[]; }; - cleaner = derive2 { name="cleaner"; version="1.2.0"; sha256="0n8qxvy8xixdgibh17fsl5vf1nvfj0l0804crdjq3lhr5s3b794f"; depends=[crayon knitr pillar rlang]; }; + cleaner = derive2 { name="cleaner"; version="1.3.0"; sha256="0k0nhq6ap3gwdx6vdq226d7x1sp7inrm4cgxlibvaycrg8zbcjxb"; depends=[crayon knitr pillar rlang]; }; cleanerR = derive2 { name="cleanerR"; version="0.1.1"; sha256="0rghn8rx7dj5clmc1dqvqwfm9kiva04k9gxsjjga3109l4jcpg63"; depends=[data_table plyr]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-3"; sha256="02py25pir16yklffpdicljxhwdf7bqchqllgdk069f5gikfc8yrr"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.3.0"; sha256="15icq6p2sxaz5jsdwqlqg7mgal4310vk96w53wzv3dzpzxndz7s4"; depends=[checkmate pkgload rprojroot]; }; @@ -6058,6 +6060,7 @@ in with self; { climateStability = derive2 { name="climateStability"; version="0.1.3"; sha256="1zag722sznr22xid2v1k4a9sh3sr3grfa3wwd2m943zpvyi1sk9a"; depends=[raster]; }; climatol = derive2 { name="climatol"; version="3.1.2"; sha256="0p3nk4n7izj0cmmqd9apa1gix5lfdzp08ydy0n7rkl5kbkmrkb6n"; depends=[mapdata maps]; }; climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; + climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-11"; sha256="01ax0kas43g3h21ixzc80f9gl4m9846gmk8v48rr0gkhcmbcc6jx"; depends=[PCICt Rcpp]; }; clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; climextRemes = derive2 { name="climextRemes"; version="0.2.1"; sha256="1ii79zfdz90agirh3kbq80qk8nib9ks8f42f6y664j4pwk9550w3"; depends=[boot extRemes]; }; climwin = derive2 { name="climwin"; version="1.2.2"; sha256="02kc8zvmygy9vbcx6lmxz2pyiz0sii3l35m869zr3a8hi9rx000x"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv plyr RcppRoll reshape]; }; @@ -6140,11 +6143,10 @@ in with self; { coRanking = derive2 { name="coRanking"; version="0.1.4"; sha256="03wvy19jrb3q31yfpmakji25zwc6zx26irj4rwkad81iwdqihq3s"; depends=[]; }; coala = derive2 { name="coala"; version="0.6.0"; sha256="0h7kc12yc90y5i733l6sfd9h12h0a2c7wv9wscjslj18sl3w3ccv"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; - coalitions = derive2 { name="coalitions"; version="0.6.10"; sha256="1yfibzkg4psmghfwpv5rivaxzizilbd8frgpd0z05hx519lmx9h7"; depends=[checkmate dplyr forcats ggplot2 gtools jsonlite lubridate magrittr purrr RCurl reshape2 rlang rvest stringr tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-5"; sha256="1k42vl49kfbllc5d66yn7y9f4jgbkfibmd85nl7hwm0gkgkssg36"; depends=[MCMCpack]; }; cobalt = derive2 { name="cobalt"; version="4.0.0"; sha256="14g5a0j3lcd61igsi2phhfpcfxwgiq7jlakr9nr4yb5h345zwvx7"; depends=[backports crayon ggplot2 ggstance gridExtra gtable]; }; cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; - cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; }; + cobs = derive2 { name="cobs"; version="1.3-4"; sha256="0hiw5smk6kgk0gb9840kcqkhkybl7n30s77xhjc395x09izbgix1"; depends=[quantreg SparseM]; }; cocktailApp = derive2 { name="cocktailApp"; version="0.2.1"; sha256="1aq7m3qb4s5v59ym8p5vh7lr5s1xfp8b04x64a014k47gakgiw1d"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; cocoreg = derive2 { name="cocoreg"; version="0.1.1"; sha256="0jrrkak964pl1vih592jgqgl6bw08j0fa1rh3j85x64bqq4m7278"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; }; @@ -6205,7 +6207,7 @@ in with self; { colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.3.5"; sha256="172ny0w9n2ys8pa7zxkfjsl7lv6fa59bmmbkzlwfx59wamxahmky"; depends=[httr jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.0"; sha256="0z3v2083g7kwdp21x9s2n1crfh24agpdq3yxkcdzc2awn2pwpnpi"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; - colourvalues = derive2 { name="colourvalues"; version="0.3.1"; sha256="0bwahphbvmk0jq4iafvny1nwsvcksm5avly8d30w7b6kkirym7jk"; depends=[BH Rcpp]; }; + colourvalues = derive2 { name="colourvalues"; version="0.3.2"; sha256="1ap2k9b4f0x8di0vk4756x05im64ypxhcz6s584w6j7hx4jfl3wr"; depends=[BH Rcpp]; }; colourvision = derive2 { name="colourvision"; version="2.0.2"; sha256="15ndhqpp5fi9jgiri9ysl68nf4rdamh9c25svf5nvh2wvv8shrd9"; depends=[Matrix rgl]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; @@ -6305,7 +6307,7 @@ in with self; { convevol = derive2 { name="convevol"; version="1.3"; sha256="1b0lygbrdm6rqascck5iwjnm248lklc4cxr71qlgand5jsblpcnn"; depends=[ape cluster geiger MASS phytools]; }; convexjlr = derive2 { name="convexjlr"; version="0.8.1"; sha256="1x2ra1xcyd7bvc7wq49wpihh0g9ygh1bq5214vvrhfrjfjifvlaw"; depends=[JuliaCall magrittr]; }; convey = derive2 { name="convey"; version="0.2.1"; sha256="1fcfzcpiy35xr2i81q002h07zf8gvbv1m5is7j475bi13666ynzh"; depends=[survey]; }; - convoSPAT = derive2 { name="convoSPAT"; version="1.2.4"; sha256="0by1z2z7gzycwrll1agkqnpn5h5cjr6b62gpwy11wl4lh48p4213"; depends=[ellipse fields geoR MASS plotrix StatMatch]; }; + convoSPAT = derive2 { name="convoSPAT"; version="1.2.6"; sha256="17zgrwmlpzir5z8a1blf8r2sblfzbrmbdgy1b73p7l0aayhqmywp"; depends=[ellipse fields MASS plotrix StatMatch]; }; cooccur = derive2 { name="cooccur"; version="1.3"; sha256="1wlaghhi4f3v8kzwhcgq3c6as7v3zlpkzhb232qz1amr7f0058kv"; depends=[ggplot2 gmp reshape2]; }; cooccurNet = derive2 { name="cooccurNet"; version="0.1.6"; sha256="1vqfmvjrxxn977jrry47wn4lag4yi4bkyxwlis3n1ly39kkmyh2j"; depends=[bigmemory doParallel foreach igraph knitr Matrix pryr seqinr]; }; coop = derive2 { name="coop"; version="0.6-2"; sha256="052n2h7yhjj88x87sd3ci9ahhhn5r5rvsm79kh3r2zqbxsr8zzrh"; depends=[]; }; @@ -6339,7 +6341,7 @@ in with self; { corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; corporaexplorer = derive2 { name="corporaexplorer"; version="0.8.0"; sha256="0rn35wqi4bb90k440dk1sm862azx3pfgc2d6z489fdqq7xsjnk3a"; depends=[data_table dplyr forcats ggplot2 lubridate magrittr padr plyr RColorBrewer re2r rlang rmarkdown scales shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringi stringr tibble tidyr zoo]; }; corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; - corpustools = derive2 { name="corpustools"; version="0.4.1"; sha256="1zg7vx9j678zj4hmmi03pyf91y7dxx5297ks6gk00b3521z7hybh"; depends=[data_table digest Matrix R6 Rcpp RNewsflow SnowballC stringi tokenbrowser udpipe wordcloud]; }; + corpustools = derive2 { name="corpustools"; version="0.4.2"; sha256="00v61i4c43s69mchy5zkbxgvxjx8kqlzm2vcb7snjblmd84w4id5"; depends=[data_table digest igraph Matrix quanteda R6 Rcpp RcppProgress RNewsflow SnowballC stringi tokenbrowser udpipe wordcloud]; }; corr2D = derive2 { name="corr2D"; version="1.0.0"; sha256="12k6vbqyb33kfj2xdg8rbydnp2yk15kv4b0m4lid4gf2lqmy3jwz"; depends=[colorspace doParallel fields foreach mmand profr rgl xtable]; }; corrDNA = derive2 { name="corrDNA"; version="1.0.1"; sha256="1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k"; depends=[mvtnorm]; }; corrcoverage = derive2 { name="corrcoverage"; version="1.2.1"; sha256="0r5n2g341jlinwrxxwxkav9i6qsf097pmfi07aiq663b13r3864x"; depends=[data_table magrittr matrixStats Rcpp RcppArmadillo]; }; @@ -6437,6 +6439,7 @@ in with self; { credsubs = derive2 { name="credsubs"; version="1.0.1"; sha256="0n3684fxknvvs57g2vjqykgdjfbpl6242nd23sm9nv2fn57q8k2c"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; cregg = derive2 { name="cregg"; version="0.3.0"; sha256="08dhn4i5i27zw3ayqp7lkw5z8dzckv8fhflpvz0mphax34pm3z72"; depends=[ggplot2 ggstance lmtest sandwich scales survey]; }; + crevents = derive2 { name="crevents"; version="0.1.0"; sha256="0f8xa2dn1896523am61k1ajqgmn8v6k772van6d0lajlz7crmw2c"; depends=[crul jsonlite tibble]; }; crfsuite = derive2 { name="crfsuite"; version="0.3"; sha256="10mify8y1f6iwfckfrhhhw6j01p1cd9bq5xwcyz121wkfhnny6rx"; depends=[data_table Rcpp]; }; cricketr = derive2 { name="cricketr"; version="0.0.22"; sha256="10dfzm297knwcqnznsprrwgrfa83hxqvr3px9mdgqj9q97c2bn3b"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; @@ -6615,6 +6618,7 @@ in with self; { datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamaps = derive2 { name="datamaps"; version="0.0.3"; sha256="00pvns98miq56z3prbb5qg608d5ns9wbp0711x3mmqg0bld1xwmp"; depends=[htmlwidgets magrittr]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; + datanugget = derive2 { name="datanugget"; version="1.0.0"; sha256="1ki4kgz6y9a313f07jml39pdxhadgs287rkpnlwvcw6kgj5qxala"; depends=[doSNOW foreach]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; datapack = derive2 { name="datapack"; version="1.3.2"; sha256="0v9m7fbzi1w5p3arb0ywl4yglyw87civc59ndqsdm8rp84gbvnbl"; depends=[digest hash redland uuid XML]; }; datapackage_r = derive2 { name="datapackage.r"; version="0.1.2"; sha256="0y4adfgdf2k04aaimxzj1fz50j6w6fqc8gvjls47nlqhi3dgmdav"; depends=[config future httr iterators jsonlite jsonvalidate purrr R_utils R6 readr rlist stringr tableschema_r urltools V8]; }; @@ -6656,6 +6660,7 @@ in with self; { dbx = derive2 { name="dbx"; version="0.2.5"; sha256="1g1pm0zw667m0wdzndak1qzym527lcl6gmdfzi5b3rlinkk2y0s2"; depends=[DBI]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; + dccvalidator = derive2 { name="dccvalidator"; version="0.1.0"; sha256="1b8w2bq5fmxriyvfj76cispfp5bz7gpqf774z4i6yd6hbswa5ilw"; depends=[config ggplot2 glue golem jsonlite jsonvalidate knitr markdown purrr readr readxl reticulate rlang shiny shinyBS shinydashboard shinyjs skimr stringr tibble visdat]; }; dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; }; dclone = derive2 { name="dclone"; version="2.3-0"; sha256="0w1bhzsnmnhsrrw5ffm89pj2wy2fmx14y7g6b1mb2wlwbczjzzsh"; depends=[coda Matrix rjags rstan]; }; dclust = derive2 { name="dclust"; version="0.1.0"; sha256="1icfx52v3g7kkkc11pw0xlrc8dlx5q3n2zbrd3fccmw17jzxqbg7"; depends=[openssl phylogram]; }; @@ -6666,6 +6671,7 @@ in with self; { dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddalpha = derive2 { name="ddalpha"; version="1.3.11"; sha256="1sdnb47r534nh138zk3a6b2mgi74nvshc7p5m304vjs9jlx4l2y3"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; dde = derive2 { name="dde"; version="1.0.1"; sha256="0qgnxb27a2wnrbfk5v22i985mqhjp4hp05vl1ccsapbxkpf0gqcv"; depends=[ring]; }; + ddi = derive2 { name="ddi"; version="0.1.0"; sha256="0pnkylz7l6brx6i73wys637w811psxhnr39lcmkag41s6jcgabd5"; depends=[]; }; ddiv = derive2 { name="ddiv"; version="0.1.0"; sha256="1r2sxlkw1vxf2svdi1nary3hb7c5k1b4j820mj268r9swmy632ch"; depends=[MASS segmented]; }; ddpca = derive2 { name="ddpca"; version="1.1"; sha256="1qsanid7sr2nc9pwzyz4cbjc1vg0rj255d3rnh1rb22agrgj2bc1"; depends=[MASS Matrix quantreg RSpectra]; }; ddpcr = derive2 { name="ddpcr"; version="1.12"; sha256="0kda154m588vdkjzm1vdr9irbb57l4w25pqjhqhawasvrna8nicf"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; @@ -6732,6 +6738,7 @@ in with self; { densratio = derive2 { name="densratio"; version="0.2.1"; sha256="0x333kfx5mdzzjsqy37j4bmv9iddlgp3wi4774lx8d159lbr6irp"; depends=[]; }; denstrip = derive2 { name="denstrip"; version="1.5.4"; sha256="0hzxphj740q6pfa1q42knr7n12bmnawg7b2fs74msxn83dka5cmq"; depends=[lattice]; }; denvax = derive2 { name="denvax"; version="0.1.2"; sha256="0a8x7z7jagshc5h6xy24xrvqv0gm08f78ik6y8ki4i0mhl8c5fyx"; depends=[]; }; + depcoeff = derive2 { name="depcoeff"; version="0.0.1"; sha256="08vs0yzfvd4ahcs5rz4i4spp8l6fg45bm0m22gn5rzxc4759mzac"; depends=[copula Rcpp]; }; depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; depmix = derive2 { name="depmix"; version="0.9.16"; sha256="1vi9fi131ni34z9p3x6pdp6y9v0y0nx71zg1q8898frhqwbwhd9c"; depends=[MASS]; }; depmixS4 = derive2 { name="depmixS4"; version="1.4-2"; sha256="07d4fxwnbl3jqczrylbvdch9q87az37jrjsmvilhl9h98z31wzaq"; depends=[MASS nlme nnet Rsolnp]; }; @@ -6919,7 +6926,7 @@ in with self; { divest = derive2 { name="divest"; version="0.8.2"; sha256="0kzl3niscd88kzlpnx75xx6mk1jkwxwn7gm2a6vnhpvniyyk6rs8"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.1"; sha256="06c4kjl6llvvdr2gk480jcmj2abmqwph7x4vk5nflxm7piimvg7v"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; - dixonTest = derive2 { name="dixonTest"; version="1.0.1"; sha256="080s5vkxn5lif9xk4q47ivq76dqda1k0srd7iaa0i48yny5f7mk2"; depends=[]; }; + dixonTest = derive2 { name="dixonTest"; version="1.0.2"; sha256="04d66nf47mllk5madqn6k36vc1gq2syp7kbif8cnf6imxr98xx50"; depends=[]; }; diyar = derive2 { name="diyar"; version="0.0.3"; sha256="1m4rs6q3gwpl9v62cmam3z207wsy2z2xr2dhxdqzggq8yk6qc83q"; depends=[dplyr lubridate rlang tidyr]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; dkanr = derive2 { name="dkanr"; version="0.1.3"; sha256="1zic7qhwq3s9w70zi1f6qyf7pzm69k5a1p5fd4n3z4nbga54njxd"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; @@ -6939,7 +6946,7 @@ in with self; { dmm = derive2 { name="dmm"; version="2.1-5"; sha256="1i94bsgc12ysivpy9mdmzcdfki1f84x036danki7ynrbym2b3c7a"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; - dnet = derive2 { name="dnet"; version="1.1.5"; sha256="0gw3r4sg0893gjkh54k1gyy3x5wqnv5lxhj8ds1p98c9v7j94z78"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; + dnet = derive2 { name="dnet"; version="1.1.6"; sha256="11zvqrlwhil19fpss14fd8iq1mbz0xn0r2cibyd40hdhaixz7nkl"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.4"; sha256="0hzaa308pppq2cqpb067f3y3nyv1p2xdmgy3dykf90psnn5v011p"; depends=[arm ergm glmnet igraph network sna]; }; do = derive2 { name="do"; version="1.1.0.0"; sha256="1v80vq8rc8ywajgi08xxkpcbhi800qjix5fyqi12ynq83wqmn93x"; depends=[data_table plyr]; }; @@ -7037,7 +7044,7 @@ in with self; { dtangle = derive2 { name="dtangle"; version="2.0.9"; sha256="0yg1fbrqixqp93vdw3grvz1la5l2kidgs730qp6yihkp3260cxf3"; depends=[DEoptimR]; }; dtp = derive2 { name="dtp"; version="0.1.0"; sha256="0qy8nrbq22bfbajkxq6blkq7583pc5mb392gmqb3c9daxmqn42vb"; depends=[Formula gtools plyr]; }; dtpcrm = derive2 { name="dtpcrm"; version="0.1.1"; sha256="0k25fm0z3snpx1v2kwd50svgnkjhn5c0hy1gnlw2lif6rjz1fzd9"; depends=[dfcrm diagram]; }; - dtplyr = derive2 { name="dtplyr"; version="1.0.0"; sha256="115b08fc3rpj101i0j5gx2z3w80ylgampzvb674jhx2jxf4kl9c7"; depends=[crayon data_table dplyr rlang tibble tidyselect]; }; + dtplyr = derive2 { name="dtplyr"; version="1.0.1"; sha256="0jgisglpaj1n6jhwqwsa1583i4ifazqdd9hh581w5akx5p0f05mp"; depends=[crayon data_table dplyr rlang tibble tidyselect]; }; dtree = derive2 { name="dtree"; version="0.4.2"; sha256="1cpv0pyf515610djxzfw1c83p3alk5a93clg4x9gk7a7qy4cyhr1"; depends=[caret evtree party partykit rpart]; }; dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dttr2 = derive2 { name="dttr2"; version="0.0.1"; sha256="042zll9hw4ljwr85x4dmkv8nz6r0mpawaa5s58ngxypshss8sbg0"; depends=[checkr hms]; }; @@ -7285,7 +7292,7 @@ in with self; { energy = derive2 { name="energy"; version="1.7-7"; sha256="13wnx5nwk7nsv7vf5sxhz4y0rxrnzm76ldgywk1bxrz67srqzf37"; depends=[boot Rcpp]; }; energyr = derive2 { name="energyr"; version="0.1.2"; sha256="0gjw2cvpvhyywxlx3vfkhlh7zjwig46z1zwdc01zxwflvdx3z40n"; depends=[RgoogleMaps]; }; enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; }; - english = derive2 { name="english"; version="1.2-4"; sha256="0qxrkcj65v000qi63awiak8qyqghf06b1g0f2b6gjl9ilsdkgcb6"; depends=[]; }; + english = derive2 { name="english"; version="1.2-5"; sha256="0d6rin40wy2y6k75x8d5qvf03rfy139f309wrl8xwbdb1h8fjkd1"; depends=[]; }; engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; enpls = derive2 { name="enpls"; version="6.1"; sha256="12088v9xnj5b3dlakqz1hbzxz4mdai7xi7s2fpx8lj3y3lx7znmb"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="2.1"; sha256="0ymhzs9d2wl0s9rvbqc1hqb78mlzwhlc7mmijpfqkm5r720pf6m1"; depends=[httr rjson]; }; @@ -7297,7 +7304,7 @@ in with self; { ensemblepp = derive2 { name="ensemblepp"; version="1.0-0"; sha256="08k7v61p2sgr07dklabl0g7apsn9da60sfb14gfrwipwi8bsd4pv"; depends=[]; }; ensr = derive2 { name="ensr"; version="0.1.0"; sha256="18b81iswvby7k5akbfdyc6a8j1621d4d35hxmgjip5kyvf5cb3p8"; depends=[data_table ggplot2 glmnet]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; - entropart = derive2 { name="entropart"; version="1.6-3"; sha256="06g2fig1adyxaqz2w32343qlj95xgxx63giyggbri60sjf9fck65"; depends=[ade4 ape EntropyEstimation geiger ggplot2 ggpubr reshape2 SPECIES vegan]; }; + entropart = derive2 { name="entropart"; version="1.6-4"; sha256="1wr3pkn786crklsjzg1kq3dm1ks230jp391g31cgf5hfm537c3qb"; depends=[ade4 ape EntropyEstimation ggplot2 ggpubr reshape2 SPECIES vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; entrymodels = derive2 { name="entrymodels"; version="0.1.0"; sha256="0clyv5ws5nnnyys596zbmdndds43xrvnnkbdk59kj3wscw0hq982"; depends=[dplyr magrittr readr]; }; envDocument = derive2 { name="envDocument"; version="2.4.1"; sha256="074m7adnasvys28kjdgj9071fi90vsl4yv5zvpxik4crlx098dlw"; depends=[]; }; @@ -7318,12 +7325,12 @@ in with self; { eph = derive2 { name="eph"; version="0.2.0"; sha256="0j41hmiw59q9mwzsw94s0m0hrh4fqhbmayqbblfizh7gr7wijz53"; depends=[assertthat attempt curl dplyr expss glue janitor magrittr purrr questionr readr readxl stringr tibble tidyr tidyverse zoo]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; epiGWAS = derive2 { name="epiGWAS"; version="1.0.2"; sha256="0jqblfmz02za3b2pgi15379bzgh98yv5kyv8kh0lkzhrmpgph2zj"; depends=[DescTools glmnet matrixStats SNPknock]; }; - epiR = derive2 { name="epiR"; version="1.0-10"; sha256="1y1ki5dynzs58m1wgzsydbhpi8lmfbb9h4sma064mwyw6mih0q7g"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="1.0-11"; sha256="1f9v22g7pfsywq44pck436x0dxp6nxicl3jv0d5bbppzjyf1ghp7"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.5"; sha256="0ivr51x37cbdryli9b4p4iq9v2c90zwmywrwdmg7ryq5vprvvbp0"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.3.0"; sha256="1b00k086wiwhhrlh4348wqqza1v0whakwy5h7q95rmgxz7lppiim"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; epiflows = derive2 { name="epiflows"; version="0.2.0"; sha256="09ri1p73ih0i08irc06ff169hi5vcl8bdi63b056kzxgmv17yqkp"; depends=[epicontacts geosphere ggmap ggplot2 htmltools htmlwidgets leaflet sp tibble visNetwork]; }; - epimdr = derive2 { name="epimdr"; version="0.6-4"; sha256="15j0gz8pqvmjb8q7bp1bnpv8mz63cq0j5kikp3h1146nzcnlxmaw"; depends=[deSolve polspline shiny]; }; + epimdr = derive2 { name="epimdr"; version="0.6-5"; sha256="1nxdlz7gl9vrha9iw92y0s9dmm101gkz0rsqxqg1rdxanr6hs6sh"; depends=[deSolve polspline shiny]; }; epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; epiphy = derive2 { name="epiphy"; version="0.3.4"; sha256="04wsppjycnrzrml3zxrpr0xdxxas3hj8rskiivx5vfmfjpwipq4r"; depends=[ggplot2 msm pbapply Rcpp transport]; }; episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; @@ -7398,7 +7405,7 @@ in with self; { esvis = derive2 { name="esvis"; version="0.2.0"; sha256="0l4c87l9n94q14hwky7d7i4h9c5zh8r04zlcz9w4mx7ixfd34zir"; depends=[sfsmisc]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; - ether = derive2 { name="ether"; version="0.1.5"; sha256="03skydbw4ch0lhhlm57qgg4q0vyd4rwzsq3v2w40jrczpxpdsn9q"; depends=[dplyr httr jsonlite Rmpfr]; }; + ether = derive2 { name="ether"; version="0.1.6"; sha256="1f3phh5vdfvlxqrpzsn6ysz0q3mbhr862fzsd3sp8m8qhry86cbx"; depends=[dplyr httr jsonlite Rmpfr]; }; ethnobotanyR = derive2 { name="ethnobotanyR"; version="0.1.6"; sha256="1v1vsj1nzmgji6kzgfkdmy08ajn8iag4jzw0lwh81b3vmdx8f4g2"; depends=[circlize cowplot dplyr ggplot2 magrittr reshape]; }; etl = derive2 { name="etl"; version="0.3.8"; sha256="19m1sp3ryqb1gw7i9lh8dpmwbgy0c0dpsivj27wkr36bdhfvrfls"; depends=[DBI downloader dplyr janitor lubridate readr rlang rvest stringr tibble usethis xml2]; }; etm = derive2 { name="etm"; version="1.0.5"; sha256="1yivbq8y0ijcl1m4nir4q9hp4pi6iphwxgjprygsdf7vp98wq677"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; @@ -7409,7 +7416,7 @@ in with self; { eulerr = derive2 { name="eulerr"; version="6.0.0"; sha256="0pvyg91xamhmz4k1b18g96imkddk64d6dadg74v1mnbzjiq742wh"; depends=[GenSA polyclip polylabelr Rcpp RcppArmadillo]; }; europepmc = derive2 { name="europepmc"; version="0.3"; sha256="1ngqs1sqzkbwv98dd5z4cxj8bnz41wyd0g060a2vpqi3s99s4i2h"; depends=[dplyr httr jsonlite plyr progress purrr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; - eurostat = derive2 { name="eurostat"; version="3.4.20002"; sha256="04pzn47hnjglm30f06d9iv4agapgmxr761fvbzspj6siw5yzp77g"; depends=[broom classInt countrycode curl dplyr httr jsonlite RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr]; }; + eurostat = derive2 { name="eurostat"; version="3.5.2"; sha256="02xixnsz04ll2kidv6kmcpgf8681p6brf2vcxhr0p0qcl0ibvpcw"; depends=[broom classInt countrycode curl dplyr httr jsonlite lubridate RColorBrewer readr RefManageR sf sp stringi stringr tibble tidyr]; }; ev_trawl = derive2 { name="ev.trawl"; version="0.1.0"; sha256="14yhnhqq1gz2rfy13v1dybnf55pyyimajbarxyp7gaqnd66nfq3p"; depends=[eva evir fExtremes ghyp hypergeo testthat]; }; eva = derive2 { name="eva"; version="0.2.5"; sha256="03hyzbqi2mgdrmzrjnwzvy0ndf7ha5959b63sgd1g0b998fibbmd"; depends=[EnvStats Matrix]; }; evaluate = derive2 { name="evaluate"; version="0.14"; sha256="0a2y7j534gbgixkwj9r1z76l2vssw4g1hznzbpclc076wkdqpj58"; depends=[]; }; @@ -7554,6 +7561,7 @@ in with self; { factory = derive2 { name="factory"; version="0.1.0"; sha256="1715bx2rn8kk5qd196jnrv5f95l54n4y0aqqdzfkgrmqihcy8ahx"; depends=[purrr rlang]; }; factset_protobuf_stach = derive2 { name="factset.protobuf.stach"; version="1.0.2"; sha256="0qdvgq0w58pb0bn4x5v25i8pvij3lc8l9x9bj68s9zb29ankl3ss"; depends=[R6 RProtoBuf]; }; factualR = derive2 { name="factualR"; version="0.5"; sha256="1wz8ibcmilcx62yy29nd2i1pdmjf7fm0g9i5s58gdn8cjlhnw1jl"; depends=[RCurl RJSONIO]; }; + fad = derive2 { name="fad"; version="0.2-1"; sha256="09lbakil37fyji3bwydspzvrnwm0992x8783zyyv2jk37y0wr1ip"; depends=[Matrix Rcpp RSpectra]; }; fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; fairadapt = derive2 { name="fairadapt"; version="0.1.0"; sha256="01ing7mm1asfgh4w8cc7f7fpv13lja97vv5skk5bri00zycwcqfd"; depends=[ranger]; }; fairness = derive2 { name="fairness"; version="1.0.1"; sha256="1n17vrp0a3zii3444a2a7k33ffmyxmm15c8m7ln2fypya1z2pc5l"; depends=[caret devtools e1071 ggplot2 pROC]; }; @@ -7614,7 +7622,7 @@ in with self; { fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.2"; sha256="12x3lkg5zc4ckyg4x3xxqb779yhrr0fys7asf5b8shz49f86fmm9"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; fastrtext = derive2 { name="fastrtext"; version="0.3.4"; sha256="0k38290pz92ysw57298nng7bbghf5cicvin7l9q6l89pk3qa5wp0"; depends=[assertthat Rcpp]; }; - fastshap = derive2 { name="fastshap"; version="0.0.3"; sha256="0xjwdwi6r8mpjzzf72bf13waf3pbjlrmbn4v8z8b6j35bdx76ij8"; depends=[ggplot2 gridExtra plyr Rcpp RcppArmadillo tibble]; }; + fastshap = derive2 { name="fastshap"; version="0.0.4"; sha256="0ll1ak1ps24q2m8h71swszcm3p8qzj29gaaznihws3mvppkygc57"; depends=[abind ggplot2 gridExtra matrixStats plyr Rcpp RcppArmadillo tibble]; }; fasttime = derive2 { name="fasttime"; version="1.0-2"; sha256="11i4c0zrkvvqsax0az1fvmc0jxfsjyx28434k1qgzhj9g2j9m9cf"; depends=[]; }; fat2Lpoly = derive2 { name="fat2Lpoly"; version="1.2.4"; sha256="01a9d6b2f6g858vg64kr0w0qmv2jqhk9kk3hb6jdr2rly4j8p14x"; depends=[kinship2 multgee]; }; fauxpas = derive2 { name="fauxpas"; version="0.2.0"; sha256="0l77gxcf06p984z9vgaf1kag609h9qyrgav84lxkv97h6f3fflnc"; depends=[httpcode R6 whisker]; }; @@ -7635,6 +7643,7 @@ in with self; { fdANOVA = derive2 { name="fdANOVA"; version="0.1.2"; sha256="1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="2.4.8"; sha256="0n39rzbhg1hipzn51rzmbchn2358qgapg08iv7lmiqj5y7i9qns2"; depends=[Matrix]; }; fda_usc = derive2 { name="fda.usc"; version="2.0.1"; sha256="0ii00vv4c4cvswd5vs82a1j7gbxl328bjxdk39r1xcd26iz94vlb"; depends=[doParallel fda foreach iterators MASS mgcv nlme]; }; + fdaACF = derive2 { name="fdaACF"; version="0.1.0"; sha256="19cnjs05cdln1jg568ybj1qsb8s848l8fzcw1p5i8rh92gm2x4w4"; depends=[CompQuadForm pracma]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.6"; sha256="0hyhb67qvvhyq68k5h4ffvsl4lmw66nfy5l14kwxnn42h3b810sc"; depends=[Formula Rcpp RcppArmadillo]; }; fdaPDE = derive2 { name="fdaPDE"; version="1.0"; sha256="15x5n48hn151j9h8bnqjyjnaq575mckz6dcb9lxr9zmwidg58gb2"; depends=[geometry Matrix plot3D plot3Drgl RcppEigen rgl]; }; fdadensity = derive2 { name="fdadensity"; version="0.1.2"; sha256="1i2xzchlsixgjzyfmbv547sy6mq90xrnyc2kpd11wwfgfrpj1ix3"; depends=[fdapace Rcpp]; }; @@ -7658,7 +7667,7 @@ in with self; { features = derive2 { name="features"; version="2015.12-1"; sha256="0rd8r1dxzddb6718hcm8ck7531c9wdrjfy8n67875bbxgzcvds61"; depends=[lokern]; }; featuretoolsR = derive2 { name="featuretoolsR"; version="0.4.3"; sha256="1qgk9z8ld9yyw37r3birbds4a7jffq3qqkvlnldvz3yk81ir7kw7"; depends=[caret cli dplyr magrittr purrr reticulate stringr testthat tibble]; }; featurizer = derive2 { name="featurizer"; version="0.2"; sha256="05jvwsvpbdj94q3wl7ld6xmfc9p7ff9zsmryd3mmxz0hzbq2cnkc"; depends=[]; }; - febr = derive2 { name="febr"; version="1.0.2"; sha256="0hsfmp6ay2c64wpwhaibxbbjc6s958nkrch64r6z3rbjina5avam"; depends=[dplyr glue googlesheets pedometrics readr sp stringr xlsx]; }; + febr = derive2 { name="febr"; version="1.0.3"; sha256="0rpk9k33ykcb8m475p420hpc1rj64i29dq8h0r9d49yl90ixhrn6"; depends=[dplyr glue googlesheets pedometrics readr sp stringr xlsx]; }; fechner = derive2 { name="fechner"; version="1.0-3"; sha256="0bassigcipwlr2g8cdjh8jyhmb903k3hla9gnigcbz7qwzlfwa86"; depends=[]; }; federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; fedregs = derive2 { name="fedregs"; version="1.0.0"; sha256="171j6r6qxnx9gk9x9gpdyh51ssrgmf7sczc4889qr3qqw15sm4bn"; depends=[dplyr httr magrittr purrr rvest stringi tidyr tidytext xml2]; }; @@ -7785,6 +7794,7 @@ in with self; { fluspect = derive2 { name="fluspect"; version="1.0.0"; sha256="0j80wx00s8ljqg1qaqw66rj7kxhhk438hb0syv0lr9vld03cxy2w"; depends=[pracma]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; fluxweb = derive2 { name="fluxweb"; version="0.2.0"; sha256="1ssq90fqm4p0j4g171mx208lmgz3hkxs8hgsffkawpmxgacs0gh1"; depends=[]; }; + flying = derive2 { name="flying"; version="0.1.1"; sha256="0mjn2h8101hkdhas746iqy97dsyyi50bfpi02q0ypfr6zsxji2bq"; depends=[kableExtra knitr Rcpp rmarkdown]; }; flyio = derive2 { name="flyio"; version="0.1.4"; sha256="1mrv5gvsr4zbh8bghrrizgrqz1cqn4pl3gizr77jl9mlxxpmhx20"; depends=[assertthat aws_s3 googleCloudStorageR stringr]; }; fma = derive2 { name="fma"; version="2.4"; sha256="1x175mhljvplm7b2iwcvkzalv3a79p8gqj9d4f06l5v4shxlrab9"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; @@ -7858,7 +7868,7 @@ in with self; { fpp2 = derive2 { name="fpp2"; version="2.3"; sha256="1krrvwg25qjfpfjdwd3n0d87ihl4zf7y1bnh6gbi92sdja3ljq48"; depends=[expsmooth fma forecast ggplot2]; }; fpp3 = derive2 { name="fpp3"; version="0.1"; sha256="17j5y1y46dn21049rfiwr7j0f5q2kc6jvxdpw252l063dqdb9pd9"; depends=[cli crayon dplyr fable fabletools feasts ggplot2 lubridate magrittr purrr rstudioapi tibble tidyr tsibble tsibbledata]; }; fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; - fracdiff = derive2 { name="fracdiff"; version="1.5-0"; sha256="0f735pb94xxmnqypfd5zi3qmlqg7m10z20g2cbqq71aa0y22cbvr"; depends=[]; }; + fracdiff = derive2 { name="fracdiff"; version="1.5-1"; sha256="1dhfjlhr9sb38qgpsx0sm73l9lgc13d0fk32l7fmjfnalhr3n45q"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.7"; sha256="124p5x59smqf8ba0xwhlq69w77zga2bv9plzwkadf700lzvaj2wx"; depends=[emg numDeriv]; }; fractal = derive2 { name="fractal"; version="2.0-4"; sha256="18lr9z0gslvfc3z8vyj3krqj3bfhg60zv1fzinrwwkc4cpk1w7mp"; depends=[ifultools MASS sapa scatterplot3d splus2R wmtsa]; }; fractaldim = derive2 { name="fractaldim"; version="0.8-4"; sha256="0fln4qn0d79agnnlzi8b9g9qn90zynq1cg9v5isiyi71345v45nr"; depends=[abind]; }; @@ -7984,7 +7994,7 @@ in with self; { gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; gProfileR = derive2 { name="gProfileR"; version="0.7.0"; sha256="1h1v0kgpsn04ald2izznh7fr2riwisj5hcgz4k7h3qc931rf0r4k"; depends=[plyr RCurl]; }; - gRain = derive2 { name="gRain"; version="1.3-2"; sha256="0b69gv4g5cx2p9jciy3dbixc7cc5ybyz79w21bxzpjxkcqawcp8q"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; + gRain = derive2 { name="gRain"; version="1.3-3"; sha256="1vbsvnipy014lda8djxz5a81c0c967hci31jlmkkg5523p8l2g6r"; depends=[graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; gRbase = derive2 { name="gRbase"; version="1.8-5.1"; sha256="04xccgrprzv1hs6v19fiy4fcyp9frsrrsw6nyw1ksh8cx4w681ar"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen Rgraphviz]; }; gRc = derive2 { name="gRc"; version="0.4-3.2"; sha256="0f8m83wqhmsn6p0v0msdzyy9vl900nc9ddr8y78181jxcd9mqd0d"; depends=[gRbase MASS]; }; @@ -7994,7 +8004,7 @@ in with self; { gStream = derive2 { name="gStream"; version="0.2.0"; sha256="1f4xnbavm99yhjmaahazigps41mqlfvvl29kf4fs1yjqr531y36b"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; gWQS = derive2 { name="gWQS"; version="2.0.0"; sha256="1ip8zmnvdrw5m2rcfzj4xw9fv5i74909lnxk9m3y8l3vl5iavn8y"; depends=[broom dplyr future future_apply ggplot2 ggrepel kableExtra knitr MASS nnet plotROC pscl reshape2 rlist Rsolnp]; }; - gWQSRS = derive2 { name="gWQSRS"; version="1.0.0"; sha256="09avy1xclzy5rb1wg8b7wmh4rcdi70b1xhbm9y93k0242p0yfb0r"; depends=[broom dplyr future future_apply ggplot2 ggrepel gWQS kableExtra knitr MASS nnet plotROC pscl reshape2 rlist Rsolnp]; }; + gWQSRS = derive2 { name="gWQSRS"; version="1.1.0"; sha256="1k8yxql65grp2nr4i966139ywz3wwj5vf5nqwgqv4fwxfsmv9mga"; depends=[aods3 broom dplyr future future_apply ggplot2 ggrepel gWQS kableExtra knitr MASS nnet plotROC pscl reshape2 rlist Rsolnp]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54.1"; sha256="1vwwjpi4lbgzw3fw3j9cccs9qhqa11v5hvq4hv5px373dla8pcn2"; depends=[]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-8"; sha256="0p6lav6lrwgsw29sl8vshzgi8j2smcavx047qq31s9bsn2dcw58n"; depends=[digest]; }; gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; @@ -8097,7 +8107,7 @@ in with self; { geesmv = derive2 { name="geesmv"; version="1.3"; sha256="0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w"; depends=[gee MASS matrixcalc nlme]; }; geex = derive2 { name="geex"; version="1.0.11"; sha256="19qqgr16cd4zsmfgl9ny92ncvf1418ilvhb9h3axw24mkycins61"; depends=[lme4 Matrix numDeriv rootSolve]; }; geigen = derive2 { name="geigen"; version="2.3"; sha256="0blg4w9wjprbax8z6md3285v12ajcjmcrpca52l3kd5qmxlvizy7"; depends=[]; }; - geiger = derive2 { name="geiger"; version="2.0.6.2"; sha256="0780mrs5accmlscg8ya3i341gxdk1d2x21hj4lhjhrcdc1xh8lwi"; depends=[ape coda colorspace deSolve digest MASS mvtnorm ncbit Rcpp subplex]; }; + geiger = derive2 { name="geiger"; version="2.0.6.4"; sha256="0r5g50lpq2cawh3cirj8g954wy129s6a4wjw78blpcc6kdvi5p4d"; depends=[ape coda colorspace deSolve digest MASS mvtnorm ncbit Rcpp subplex]; }; gelnet = derive2 { name="gelnet"; version="1.2.1"; sha256="10ygdfz9f5xhahlqb2divwvaljhiz8jhsd12wvq0qalx0v1h5j0p"; depends=[]; }; gemlog = derive2 { name="gemlog"; version="0.36"; sha256="06av0gg9b96fdfq275wany036jxzrym3g5klbjmj1cjvl1kyvjim"; depends=[signal]; }; gemma2 = derive2 { name="gemma2"; version="0.1.1"; sha256="1kbjb5cjgrbdf695nz916w40a78zy5xjmr99l835iy27k3i2p61i"; depends=[Matrix readr]; }; @@ -8262,7 +8272,7 @@ in with self; { ggetho = derive2 { name="ggetho"; version="0.3.4"; sha256="05wh0qk5cbcvcfgj5wf12qqbjgl1bbwcxywc16qdby7r4h5wy0gn"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.3"; sha256="1p3hbznpsaznlk0lnjyazc130www0p5919qplg3kspng7qh8p22w"; depends=[colorspace dplyr ggplot2 rstan]; }; ggfittext = derive2 { name="ggfittext"; version="0.8.1"; sha256="1a5k8fba2qjxnpd14vqkakpzcwkzqbpvs8h6fb9zh62y91n6p26v"; depends=[ggplot2 shades stringi]; }; - ggfocus = derive2 { name="ggfocus"; version="0.9"; sha256="03adq3pdhlgckqc20aw6r70kdcrw0v4rmm848ivv6wkck4qyla3m"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; + ggfocus = derive2 { name="ggfocus"; version="1.0.0"; sha256="03q0rz7flm8sc8hrlkcm5fz66qiyxb8z8q4bh9dglhw0jc8q1fvb"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; ggforce = derive2 { name="ggforce"; version="0.3.1"; sha256="04926cqrda6psvy2nzkkw4czwyxdp7fnxg76byp14v12kgd72lm0"; depends=[ggplot2 gtable MASS polyclip Rcpp RcppEigen rlang scales tidyselect tweenr withr]; }; ggformula = derive2 { name="ggformula"; version="0.9.2"; sha256="16ycabhnp78fsiv1dc63ccgh9gmpsy2683vbmq0fdzl6w3pd87sr"; depends=[ggplot2 ggstance magrittr mosaicCore rlang stringr tibble tidyr]; }; ggfortify = derive2 { name="ggfortify"; version="0.4.8"; sha256="191q2z7w0l4v7swjlxs2hjgbjngw2838688s7ygnj0kigsm310f3"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; @@ -8272,7 +8282,7 @@ in with self; { ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghalves = derive2 { name="gghalves"; version="0.0.1"; sha256="03s1wrfgkd55zmf3scv6kp32s3lcpbm5prnc5ndgad43zq8jyi09"; depends=[ggplot2 gtable]; }; - gghighlight = derive2 { name="gghighlight"; version="0.1.0"; sha256="1mfjvfm5xbih7k7qz6x8akbqgh0b18dz9pybfgh7rbq2ppwnhpy9"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang tibble]; }; + gghighlight = derive2 { name="gghighlight"; version="0.2.0"; sha256="1500lv7lsf2aaw4jny61apx62nnj76mnwfvr8kl3qidip53cah48"; depends=[dplyr ggplot2 ggrepel lifecycle magrittr purrr rlang scales tibble]; }; ggimage = derive2 { name="ggimage"; version="0.2.7"; sha256="01yymg5q4bjnchlxpc7yjskjaz1bkf707fvr01kn18cr4bb606mg"; depends=[ggplot2 ggplotify jsonlite magick rvcheck scales tibble]; }; gginference = derive2 { name="gginference"; version="0.1.0"; sha256="0dikyqryz25ikm047clkwn0ihlxa5zia2bxp71fh8ynxxvzixz3k"; depends=[ggplot2 rlang]; }; gginnards = derive2 { name="gginnards"; version="0.0.3"; sha256="15ly88wjsd2fqvp483376rm2fczcbmj1s1vagb70z9z7968407xy"; depends=[ggplot2 magrittr rlang stringr tibble]; }; @@ -8339,9 +8349,9 @@ in with self; { ggvis = derive2 { name="ggvis"; version="0.4.5"; sha256="091i9f17912j8qcyxppjgwzjnyqj7769ixs9d2gjg6f2clskqdw2"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.3"; sha256="04dv33vnip0rrli1diq43v7vhr86bmxjdyxjbxz5x4371kbb312j"; depends=[deldir ggplot2 raster rgeos sp]; }; ggwordcloud = derive2 { name="ggwordcloud"; version="0.5.0"; sha256="0mr92738s3j9wm6mkr5hd2flqsqw3vfjifv3fajsygysbwrl8dn8"; depends=[colorspace ggplot2 png Rcpp scales]; }; - gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; }; + gh = derive2 { name="gh"; version="1.1.0"; sha256="1bc9bn1078s664hc806dh0y1ncxif77q479rfmxfir9z7hwaz7yy"; depends=[cli httr ini jsonlite]; }; ghibli = derive2 { name="ghibli"; version="0.3.0"; sha256="1527225yp9czmq7y1r08jvzwhxdxi50n5szay92hl9ln829x9phh"; depends=[]; }; - ghyp = derive2 { name="ghyp"; version="1.5.7"; sha256="195hsskh2ykafqr93f675xqsmhbrki3abi61hk78bzy09n1d4jfk"; depends=[gplots numDeriv]; }; + ghyp = derive2 { name="ghyp"; version="1.5.8"; sha256="0ncaib6k4z02p3lw4c0l5b7dhxjylmqxqbx96kgj7z1na6jkvmf3"; depends=[MASS numDeriv]; }; gibble = derive2 { name="gibble"; version="0.2.0"; sha256="11fhswszdgackwkvals4k7pn8syfphkwvfx7kiv7psnsr94q376n"; depends=[dplyr rlang tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; gifski = derive2 { name="gifski"; version="0.8.6"; sha256="00w4bzp0rrp4isy1rnxs6g1q07r3wndadk3mqdrxk2wxi7jmghna"; depends=[]; }; @@ -8376,7 +8386,7 @@ in with self; { gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; glinternet = derive2 { name="glinternet"; version="1.0.10"; sha256="15dikazmhs7md7j8p45f67h3947br18hsrjl74cjk10vazd0ihng"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.37"; sha256="169y3yz947d8qdphqv2a6yrdash6v2h9jfvj2fk7rcpmz0r45kl6"; depends=[]; }; - gllvm = derive2 { name="gllvm"; version="1.2.0"; sha256="1ks2kz3c7gfcnxc0c8s0d88ygnzkczczv4z8why8qqp7s5bivk10"; depends=[fishMod MASS Matrix mgcv mvabund mvtnorm RcppEigen statmod TMB]; }; + gllvm = derive2 { name="gllvm"; version="1.2.1"; sha256="1zz1q8qxgpb9kxcdrylpgl36x3lq7gg12r0gjmhrry584y1adp59"; depends=[fishMod MASS Matrix mgcv mvabund mvtnorm RcppEigen statmod TMB]; }; glm_deploy = derive2 { name="glm.deploy"; version="1.0.4"; sha256="1akklvbhz2pp0sv1hax1jq0s9ajbfv1597z643gh5l9hwizj2h9m"; depends=[Rcpp]; }; glm_predict = derive2 { name="glm.predict"; version="3.1-0"; sha256="16ahl6jvydmx48hzixv8whsr55w527k0a1xbic20crinblx0ncb4"; depends=[MASS nnet]; }; glm2 = derive2 { name="glm2"; version="1.2.1"; sha256="1byqlvpls23gzy7xlbs1kgfr4bsrmsrpc8rzzacf9czap1nlw39y"; depends=[]; }; @@ -8430,7 +8440,7 @@ in with self; { gmm = derive2 { name="gmm"; version="1.6-4"; sha256="15dwf3dgr88n3s1i4lqmv75vfmrc85kdhhgs2gprqkhpgprmzb83"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3.1"; sha256="01mman2nh7wzlhh89iwaskz9n15v3p5llid5557dwmqn8ybzsdvx"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.18.1"; sha256="0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"; depends=[gdata MASS]; }; - gmp = derive2 { name="gmp"; version="0.5-13.5"; sha256="042mzsl6z6s61fy5m21yf9q83l08vnyqljn4iax7kqyiycpsp0gn"; depends=[]; }; + gmp = derive2 { name="gmp"; version="0.5-13.6"; sha256="0j2sz2nw41y9306rl1b8hbn0spz7453z5iawcq0bvslyrhc1d9ir"; depends=[]; }; gmt = derive2 { name="gmt"; version="2.0-1"; sha256="1g1sj9gq3h3s0pdcfvzg7iifkns5azn3pa83if0d3yzc28cjf0yz"; depends=[]; }; gmvarkit = derive2 { name="gmvarkit"; version="1.1.2"; sha256="02m6brh7rj35a0yjzmfc1p16rlyb97fsqbsqjj0ndcdadbqcxz73"; depends=[Brobdingnag mvnfast pbapply]; }; gnFit = derive2 { name="gnFit"; version="0.2.0"; sha256="0cji4zjslh18dfj0l827r6br4hx2f0akiaxrg7fhhyyyhgdcjnsm"; depends=[ismev rmutil]; }; @@ -8441,6 +8451,7 @@ in with self; { gnorm = derive2 { name="gnorm"; version="1.0.0"; sha256="17h43qwb07wk5hiif89k6dgn6bbdsqfy2jy3k5blbdhhp3b9jcqp"; depends=[]; }; gnumeric = derive2 { name="gnumeric"; version="0.7-8"; sha256="0iwl00mzsg8h8q67bjp6485idjlmj24362b1rbmkifckss8hrc98"; depends=[XML]; }; goeveg = derive2 { name="goeveg"; version="0.4.2"; sha256="0k9pyph065x8wp452x8kz28ikhsbrm80ln4yssmcgqm7085dyyya"; depends=[cluster fields Hmisc mgcv vegan]; }; + gofCopula = derive2 { name="gofCopula"; version="0.3-1"; sha256="05n30mvy7rn1pkyy2pfhk05nab6pkagydws8ri3ixmyvrspal23b"; depends=[copula doSNOW foreach MASS numDeriv progress R_utils SparseGrid VineCopula yarrr]; }; gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; }; gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goffda = derive2 { name="goffda"; version="0.0.6"; sha256="0j2fx3vzd4rda4hlhgkkcq1rgn79rah2r5dkx2rikl3rkfjjj6yi"; depends=[fda_usc glmnet ks Rcpp RcppArmadillo]; }; @@ -8536,6 +8547,7 @@ in with self; { gridSVG = derive2 { name="gridSVG"; version="1.7-1"; sha256="03ra820lm0gydrvxmck658aaj3mqqkqrinxc134r5npl8bv4x2hg"; depends=[jsonlite XML]; }; gridsample = derive2 { name="gridsample"; version="0.2.1"; sha256="062aryy26x07m31r6m0fj1zgnjhivlh1fikx9lv2rdgk0rh4yzz0"; depends=[data_table geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; + gridtext = derive2 { name="gridtext"; version="0.1.0"; sha256="1fk1ywb088fr1cyfjjsc1qrrvpn6khb3vv8ilxss0d2nclx6zkar"; depends=[jpeg markdown png Rcpp RCurl rlang stringr testthat xml2]; }; gripp = derive2 { name="gripp"; version="0.2.20"; sha256="0rshipm8rdynl19a4dsvvvlhkd0n4vjfkidwnv5iilc5ini7c4qr"; depends=[GA GenSA usethis]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; groc = derive2 { name="groc"; version="1.0.6"; sha256="0x7rrf5bw05s257xhzklpc6hslpjnzjx02hlrz4r9zixbfffmawc"; depends=[MASS mgcv pls robust robustbase rrcov]; }; @@ -8615,7 +8627,7 @@ in with self; { gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; - h2o = derive2 { name="h2o"; version="3.26.0.2"; sha256="1ldjk1gm6jb5zvk2rmlfah4zm827dpmj4c5q83ysd4arwqqz5gna"; depends=[jsonlite RCurl]; }; + h2o = derive2 { name="h2o"; version="3.28.0.2"; sha256="1975898p9bh61qa01aqzdkxjcnblgbkn0ld7das9ibav4w5jjva5"; depends=[jsonlite RCurl]; }; h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; hBayesDM = derive2 { name="hBayesDM"; version="1.0.2"; sha256="04p4d0hy2l6bmxyh2k5q0g19b7fbpsl9frmcvrf5rxkaasxyxwn6"; depends=[BH data_table ggplot2 loo Rcpp RcppEigen rstan StanHeaders]; }; hIRT = derive2 { name="hIRT"; version="0.2.0"; sha256="1vgmr36dbcn2ah9pzhc46zh1va7y7w3zr4mpmyf626m1bq0alb39"; depends=[pryr rms]; }; @@ -8692,6 +8704,7 @@ in with self; { heatmaply = derive2 { name="heatmaply"; version="1.0.0"; sha256="0576gml3bcl7r1biigzj1rag2xzz422knbw7arc8d2gsakjj757g"; depends=[assertthat colorspace dendextend egg ggplot2 htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; heatwaveR = derive2 { name="heatwaveR"; version="0.4.2"; sha256="1fp38vlb4646jg397gsxmf5ws15grmmg6hdzijwll5zsg6a9xhg4"; depends=[data_table dplyr ggplot2 lubridate plotly Rcpp RcppArmadillo RcppRoll tibble zoo]; }; heavy = derive2 { name="heavy"; version="0.38.196"; sha256="05k788ynw9fhhmjydzp8dbk1vhl44j2rz2shqwn02i40jmwdvwrk"; depends=[]; }; + heddlr = derive2 { name="heddlr"; version="0.5.0"; sha256="1xjlp283vv6fwdjyschjriijczhiiinjmkd3i1m5f57n0yvwpq03"; depends=[rlang utf8 yaml]; }; hedgehog = derive2 { name="hedgehog"; version="0.1"; sha256="1mvjnm2zlc4pvw9vnhxr0dj1g1sfqvlrnnhcipzfbvr147yan9l5"; depends=[rlang testthat]; }; heemod = derive2 { name="heemod"; version="0.11.0"; sha256="0zzjq4cmyr25p4x91jw542jiqmds6qikbp8gyix34dcmk765drnk"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr rlang tibble]; }; heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; @@ -8705,7 +8718,7 @@ in with self; { hereR = derive2 { name="hereR"; version="0.3.0"; sha256="119py0lpbnc03v2md3wg5pbq7kz40rw82jhmc529i6hkz4qf65js"; depends=[curl data_table jsonlite lwgeom sf stringr]; }; heritability = derive2 { name="heritability"; version="1.3"; sha256="0a0pw8hppkgypl4jaa38hks9nxfwz2zbsd4w6w40j1hxlyy4km8m"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; - hero = derive2 { name="hero"; version="0.0.3"; sha256="166jqxlp2x459ixm83kw55ssd86041qiwfymsk035r5aaf7nvjq1"; depends=[]; }; + hero = derive2 { name="hero"; version="0.4.7"; sha256="129v2pjbxm5aalr5lfx0kh20rhwksnb80pc459pxg0xkwxvy1l3d"; depends=[fields Matrix optimx pbapply rgeos sp]; }; hesim = derive2 { name="hesim"; version="0.2.2"; sha256="1wchccw9761iz0sk5sd8ahdzpphrd4k9rmgg8f9cgp43aza68ic2"; depends=[data_table flexsurv MASS R6 Rcpp RcppArmadillo survival]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; hetGP = derive2 { name="hetGP"; version="1.1.2"; sha256="0r7hzw6ccyrqpq51adljd2ljv9dl00c0dr8frjrhibpzpc68z3sz"; depends=[DiceDesign MASS Rcpp]; }; @@ -8884,7 +8897,7 @@ in with self; { iC10 = derive2 { name="iC10"; version="1.5"; sha256="1xq6xv582wxdb0nc2nia3q38155gx8z26idiqyx7h1rjb20hhwdl"; depends=[iC10TrainingData impute pamr]; }; iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; iCARH = derive2 { name="iCARH"; version="2.0.1.1"; sha256="0722dfydq16vhdk7hrdwngkppq0g20ghak614jfnrfr6rnrn630s"; depends=[abind ggplot2 igraph KEGGgraph MASS Matrix mc2d RCurl reshape2 rstan]; }; - iCellR = derive2 { name="iCellR"; version="1.2.9"; sha256="1bspcndcq6a2y3pnsfijp11pczxikbxy3m9jjznwfiisl8xcvqav"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr RColorBrewer reshape Rtsne scatterplot3d shiny uwot]; }; + iCellR = derive2 { name="iCellR"; version="1.3.0"; sha256="060kyq67aql7ykhr888qd3w8qm65sgix5nhiaxvwsz6jgq7lrrl2"; depends=[ape ggdendro ggplot2 ggpubr ggrepel gridExtra hdf5r Hmisc htmlwidgets knitr Matrix NbClust pheatmap plotly plyr RColorBrewer reshape Rtsne scatterplot3d shiny uwot]; }; iCiteR = derive2 { name="iCiteR"; version="0.2.1"; sha256="0hbps2q5i7yj6zvqawlayhqqr5iv39yqc0xnk7fvra7rimzc1qid"; depends=[httr]; }; iClick = derive2 { name="iClick"; version="1.5"; sha256="0yq0r9nz1mf9ci6l30ylqxbgl8mf1ahyqzr7m6nks0ygxabipdnd"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries xts zoo]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; @@ -8947,6 +8960,7 @@ in with self; { icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.4.0"; sha256="01whs8wssjx3qgdnc1ixh59gvn1bajqm5q3zj1jpw1dqjh71qzf0"; depends=[httr purrr rvest]; }; icr = derive2 { name="icr"; version="0.6.1"; sha256="1hmlh01p286zq26ya2x7hn4xba2g0q988pmvmxy6lfv0nigys0gs"; depends=[Rcpp]; }; + icrf = derive2 { name="icrf"; version="1.0.0"; sha256="1qz4wv23hspbrfzrj80qmhi0759zh3gn23rnns18j3020f506jdd"; depends=[Icens]; }; icsw = derive2 { name="icsw"; version="1.0.0"; sha256="0g7bcqs0rpbs1p202i9wjbl8hhy3r196zambm044xyf7kvsbzzf6"; depends=[]; }; idar = derive2 { name="idar"; version="1.1"; sha256="0nac7sav4rrp6a94aqgp8qyb22wg7y7gc5n1dhid894yc9z47a5f"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; @@ -9170,7 +9184,7 @@ in with self; { irtDemo = derive2 { name="irtDemo"; version="0.1.4"; sha256="0rpwryybnj7b4bxn0mn1m496y85s2fpqdd78lmdl6jg1ck4j4pb3"; depends=[fGarch shiny]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; - irtplay = derive2 { name="irtplay"; version="1.3.0"; sha256="1lix9j9xnid0npxmjyjk79an2jfcjf0k109d05cv5hv02813kj23"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; + irtplay = derive2 { name="irtplay"; version="1.4.0"; sha256="0v2zwb9jqfbbmfs8zshzvmmhz7g98pm3k9q83yb38q2zakvg1jip"; depends=[dplyr ggplot2 gridExtra pbapply purrr reshape2 rlang statmod tidyr]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; irtreliability = derive2 { name="irtreliability"; version="0.1-1"; sha256="15qs8bvgrwajj5kfd57rd34l1p2805ilyd7w60ngrqc14d6az9d2"; depends=[fastGHQuad ltm mirt]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; @@ -9235,7 +9249,7 @@ in with self; { jagsUI = derive2 { name="jagsUI"; version="1.5.1"; sha256="1samj54hyarx9j6k652jl988y3fhxsqg50hfzxdwairg0m2mlgmq"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; - janitor = derive2 { name="janitor"; version="1.2.0"; sha256="131bld44bkjahpby0aqscl9sh1abc31dx2822vbdvib55hls45ay"; depends=[dplyr magrittr purrr rlang snakecase tidyr]; }; + janitor = derive2 { name="janitor"; version="1.2.1"; sha256="1sgak2zdwy9kwz24q88dpjjvnc8pmw9iansy5ci2hphh3wiykali"; depends=[dplyr magrittr purrr rlang snakecase tidyr]; }; jaod = derive2 { name="jaod"; version="0.2.0"; sha256="0cphwfmv5pbkf9hvz9w25gncldycgdfxmg6ajbvj9mdl46z3jddw"; depends=[crul jsonlite tibble]; }; jarbes = derive2 { name="jarbes"; version="1.7.2"; sha256="0qjnx0m65f6a8r6y5mwplaq518lrsf73k8zbf728v857nbjlhf2l"; depends=[ggExtra ggplot2 gridExtra MASS mcmcplots R2jags rjags]; }; jcext = derive2 { name="jcext"; version="0.1.1"; sha256="02zppiyq3gy551zi1g00gam1w4y1wgzn5zi9wrcz8yw915dla0ix"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; @@ -9263,7 +9277,7 @@ in with self; { jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; joineR = derive2 { name="joineR"; version="1.2.4"; sha256="05wr7gr3mnsfj8a1m5v1b71gh3fc4pyhj6rqapls7iwrkywbf1b6"; depends=[lattice MASS nlme statmod survival]; }; - joineRmeta = derive2 { name="joineRmeta"; version="0.1.1"; sha256="0d9wwb3v43v30xjy67j366mhwixzz79bm67j01fqmcdsnmn3qpjn"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm nlme statmod survival]; }; + joineRmeta = derive2 { name="joineRmeta"; version="0.1.2"; sha256="0lkj3rry8kvdcl3dxrkvnql8rl3fsgc4lk5qdifhl41aws2q7ccs"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm statmod survival]; }; joinet = derive2 { name="joinet"; version="0.0.3"; sha256="01rql7nidmzhrz6agy5kphsln5nl4lpyrqdrfmf5w98zjr8yqkpr"; depends=[cornet glmnet palasso]; }; joint_Cox = derive2 { name="joint.Cox"; version="3.7"; sha256="1h9cqmly5rrrqvxzkx5fxjaqzks9hpvb2ggaw8b5rn67wbyblrl9"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.3"; sha256="0pra70jcnkqkzrxz5vc6lzi637rp5w8n9wbv9ix718vnd0j3fm3n"; depends=[]; }; @@ -9296,9 +9310,9 @@ in with self; { jstable = derive2 { name="jstable"; version="0.9.2"; sha256="0vp6bb2yqnh81avy085y6ylb3qll671xmjddi6gilzmbxpks9xl6"; depends=[car coxme data_table dplyr geepack labelled lme4 magrittr purrr survey survival tableone tibble]; }; jstor = derive2 { name="jstor"; version="0.3.7"; sha256="0if7ngqs9ncnkg9kiag3k51ipxiyrkaqm7lzmvp84hysqq8536jc"; depends=[cli crayon dplyr furrr magrittr pryr purrr readr rlang stringr tibble tidyr xml2]; }; jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; }; - jtools = derive2 { name="jtools"; version="2.0.1"; sha256="03c3nii7il8wjdpv99xqlbpf12hjpw7ni4vdqxmkffybra6c97nx"; depends=[crayon ggplot2 magrittr pander pkgconfig rlang tibble]; }; + jtools = derive2 { name="jtools"; version="2.0.2"; sha256="1vm2jd70w4a9qfnq2wjixnvpv9yilal6xpfjajgqx289c19csvq9"; depends=[crayon generics ggplot2 magrittr pander pkgconfig rlang tibble]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; - jubilee = derive2 { name="jubilee"; version="0.3.1"; sha256="1wdm5k9hy3v3kahjyhifqqivqn13c8h3bcxg2z2qam7hcafvdc1l"; depends=[data_table readxl xts yaml zoo]; }; + jubilee = derive2 { name="jubilee"; version="0.3.3"; sha256="1j2y44pfx9z2k169lh42b4dnfrrnk8jqsjn3wz4l9iscr6r91lx7"; depends=[data_table dplyr readxl xts yaml zoo]; }; junctions = derive2 { name="junctions"; version="1.1"; sha256="1v5jx4mw6x4q3fivsvidd49b8czzbvv5icj39h6jrpmqvrnc8w32"; depends=[Rcpp]; }; junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; }; justifier = derive2 { name="justifier"; version="0.1.0"; sha256="14795pf94bzcnnaf5w0xqzy06vqvs76gdvr1rn4ihqh2az00l6n7"; depends=[data_tree DiagrammeR purrr ufs yum]; }; @@ -9423,6 +9437,7 @@ in with self; { ks = derive2 { name="ks"; version="1.11.6"; sha256="0hcccjfqnzdxkmnfzq8c5a7yhc138azwyl7rp29d1vl1jawwrwfq"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; ksNN = derive2 { name="ksNN"; version="0.1.2"; sha256="06x471hck95xqy7rbh53ibhzh6kfjra7y9ipqdj2rqdkmfdj72q8"; depends=[Rcpp]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; + ksharp = derive2 { name="ksharp"; version="0.1.0.1"; sha256="1dnkj838y8c1b53mlljhjqs3nd864i9xcqsv9n4fw28b4br9m570"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; kst = derive2 { name="kst"; version="0.5-2"; sha256="0xkmwr4222h4r5dzmfgr0zk8gx7bplm865p5snw2q6h46rbfsasv"; depends=[proxy relations sets]; }; kstIO = derive2 { name="kstIO"; version="0.3-0"; sha256="0pmgb7n4gvslzc6qhqga39593k45vimj1y774bfsxhsacsb1ad9l"; depends=[kstMatrix MASS pks relations sets stringr]; }; @@ -9556,7 +9571,7 @@ in with self; { leafpm = derive2 { name="leafpm"; version="0.1.0"; sha256="06d2k5x6bnv7bf4aw2bayi8sh5bw8z6akwnp7da5s7454hyqn0vv"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet sf]; }; leafpop = derive2 { name="leafpop"; version="0.0.5"; sha256="0mv04inb7glv69baq6xwdm2rnk9mihjz0rgd4zw6qyxnf03lhh06"; depends=[base64enc brew htmltools htmlwidgets sf svglite uuid]; }; leafsync = derive2 { name="leafsync"; version="0.1.0"; sha256="0p6pb7w5yz2wj33kdh7ixii9f6b8zv018psp6b7ifr7npgdxi3vx"; depends=[htmltools htmlwidgets leaflet]; }; - leaftime = derive2 { name="leaftime"; version="0.1.2"; sha256="0a653h0lhdw10j9yv0jsvaivj09fz1cjg3z9g3caja6c83w5c65q"; depends=[geojsonio htmltools htmlwidgets leaflet]; }; + leaftime = derive2 { name="leaftime"; version="0.2.0"; sha256="10ij06rq7kmfnzfa629l2kskwj96lh87m00wi9b1aq15b5h7bxls"; depends=[htmltools htmlwidgets leaflet]; }; leanpubr = derive2 { name="leanpubr"; version="0.3.1"; sha256="0c8pmzn25cwv0wccf30zrrqrs5amlk8iqyyva9vp9976wzwgbxrx"; depends=[httr jsonlite xml2]; }; leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; leaps = derive2 { name="leaps"; version="3.1"; sha256="1dn3yl1p03n0iynd1vsdkrr0fhmvgrmfkv37y7n371765h83lz1x"; depends=[]; }; @@ -9774,7 +9789,7 @@ in with self; { lori = derive2 { name="lori"; version="2.2.0"; sha256="1jsnfrkn6zn20gs8qhw5znfzaqp9j274yfqajcgfvy916j50acac"; depends=[data_table rARPACK svd]; }; lotri = derive2 { name="lotri"; version="0.1.1"; sha256="1zqp56hxqyf9a820p2d272ykqnrym2qc5sbmah68qv8ql9n1z9qg"; depends=[Matrix]; }; lowmemtkmeans = derive2 { name="lowmemtkmeans"; version="0.1.2"; sha256="08zhdw48rzw47yzhg4s37bkliyngxs46cyb57dvng1s3m0w0dhvi"; depends=[Rcpp RcppArmadillo]; }; - lpSolve = derive2 { name="lpSolve"; version="5.6.13.3"; sha256="1xazby8amb47vw5n12k13awv7x3bjci3q8vdd3vk1ms0ii16ahg6"; depends=[]; }; + lpSolve = derive2 { name="lpSolve"; version="5.6.15"; sha256="1fpkyjyqykwa1dxnhiky01pm09syxg169lm7hpy39bdbg10vw9s6"; depends=[]; }; lpSolveAPI = derive2 { name="lpSolveAPI"; version="5.5.2.0-17.6"; sha256="04ah9xjr3574i3sfif90f6mln1cxpq7ia2nza30j5pfijqr7vwgd"; depends=[]; }; lpbrim = derive2 { name="lpbrim"; version="1.0.0"; sha256="1cbkzl23vgs9hf83ggkcnkmxvvj8867k5b9vhfdrznpqyqv1f2gp"; depends=[Matrix plyr RColorBrewer]; }; lpc = derive2 { name="lpc"; version="1.0.2.1"; sha256="1g1dzm7pcrbrdk1dmhbdhj58j69dzar41al3i8q4gysf3adqzsvv"; depends=[]; }; @@ -9851,7 +9866,7 @@ in with self; { mSTEM = derive2 { name="mSTEM"; version="1.0-1"; sha256="0mh09mqqpq9k8jrxs9d39009idld3b4y98ik75czdy580jmdg7mm"; depends=[doParallel foreach latex2exp]; }; mSimCC = derive2 { name="mSimCC"; version="0.0.1"; sha256="1f15r214srcdb4yacmy4hq890a674iqd2s7bry5dk20k46qdl026"; depends=[doParallel foreach]; }; maSAE = derive2 { name="maSAE"; version="1.0.0"; sha256="0z349p4bipqrfn60cf14b19d1d1b30a302mxkyaknf32n0rz18lk"; depends=[]; }; - mable = derive2 { name="mable"; version="2.0"; sha256="1z5ffm85x74hn6z4gz51mcg119122f5al4rg0dnc3w2xx03xpg3j"; depends=[aftgee icenReg survival]; }; + mable = derive2 { name="mable"; version="2.0.1"; sha256="1jz0nnjx0sidxgvqfsmps3h4g4f73fpks37r6v11da0dmkcb1biz"; depends=[aftgee icenReg survival]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; @@ -9871,7 +9886,7 @@ in with self; { magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.0.10"; sha256="053l455si22mddc5cgihhnpkmxr2anfqvbzsa89djjpw5ah2vg1x"; depends=[celestial mapproj MASS plotrix RColorBrewer sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="2.2"; sha256="1xh5mhaks3wk1iwqs9d3lnbfv121lc1yz5fqdzk5il9ppr831l85"; depends=[curl magrittr Rcpp]; }; + magick = derive2 { name="magick"; version="2.3"; sha256="182b4wahkq9q0scn99mql4vm9fp92nja0r5yizc4x9rjl492ahd8"; depends=[curl magrittr Rcpp]; }; magickGUI = derive2 { name="magickGUI"; version="1.1.1"; sha256="0p2266vpy6snvn0a4winwv3qygz1gkhh3kxa8qmf7qdx34xv4qwd"; depends=[magick]; }; magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; }; @@ -10122,7 +10137,7 @@ in with self; { metamisc = derive2 { name="metamisc"; version="0.2.2"; sha256="0ll245a3f442n7jyjshcn87l725mgk132ri73kynrwh0z8g2r7i5"; depends=[ggplot2 lme4 metafor mvtnorm plyr pROC]; }; metan = derive2 { name="metan"; version="1.2.1"; sha256="0bgyrza03fdjd8hannzc70hrmd2cn6cvs58kq4lmjds5vckk27w5"; depends=[ade4 cowplot dendextend dplyr FWDselect GGally ggforce ggplot2 ggrepel gplots lattice lme4 lmerTest magrittr progress rlang tibble tidyr tidyselect]; }; metansue = derive2 { name="metansue"; version="2.3"; sha256="18vy294862lfgxiw9cikai9svy3wpwk2bvz3vp20fcslg90mn3xp"; depends=[]; }; - metap = derive2 { name="metap"; version="1.2"; sha256="0pfbcixjrzx81l9wqhlp55khg9k63zf8pvg2n39c19akr4ppzhvf"; depends=[lattice mutoss Rdpack TFisher]; }; + metap = derive2 { name="metap"; version="1.3"; sha256="1jmmmmjiklaxfl604hwqil193ydaghvd5jv8xsr4bx3pzn5i9kvz"; depends=[lattice mutoss Rdpack TFisher]; }; metaplot = derive2 { name="metaplot"; version="0.8.3"; sha256="1zw8bq2fy9m15dfc92ag0dz2k9dqrf5jbvfaycizcgsgaqd79s1c"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; metaplus = derive2 { name="metaplus"; version="0.7-11"; sha256="05pkgw0zlq3q9mvdw2yxz9mxzqwq3c8q6cwvh87cigw1pf8y9an7"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; @@ -10143,6 +10158,7 @@ in with self; { methcon5 = derive2 { name="methcon5"; version="0.1.0"; sha256="08xsi6j65izxqcrlh37f2d7m3pwna1v6zvdv96mqylsjqgqmbk5x"; depends=[dplyr magrittr purrr rlang]; }; metricTester = derive2 { name="metricTester"; version="1.3.6"; sha256="0m49sl42bf0rlkvg3sq87vgx3dv65pxvcm07gflx5wlr26x1r0s1"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR vegan]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; + metropolis = derive2 { name="metropolis"; version="0.1.5"; sha256="0nhkzy1miycqa2jqh9gh1l48n03nig99q19f46dm8qqci7a90vlp"; depends=[coda]; }; mets = derive2 { name="mets"; version="1.2.6"; sha256="0vaqizmr27144dkh5mh095vih0p70j3ly9zwk5h0fklmn8bf2qhl"; depends=[lava mvtnorm numDeriv Rcpp RcppArmadillo survival timereg]; }; metsyn = derive2 { name="metsyn"; version="0.1.2"; sha256="0iwp0nz07yd33qd93fjblmvik1l1xkv6rkccn3054zs2bkrzjq4f"; depends=[foreach readr stringr tibble]; }; mev = derive2 { name="mev"; version="1.13"; sha256="0mcjis66v9jzcdamagizvz5c58qpzqa9dzj0ypqfv1cl061d6c4j"; depends=[alabama boot evd nleqslv nloptr Rcpp RcppArmadillo TruncatedNormal]; }; @@ -10189,8 +10205,6 @@ in with self; { microPop = derive2 { name="microPop"; version="1.5"; sha256="1gikp20n2b50fkybbg2hmlfjdcm0imjwygjsjnyv3wrjzypm2i78"; depends=[deSolve]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; microbenchmark = derive2 { name="microbenchmark"; version="1.4-7"; sha256="1xl4m4yl4h2zcjiz8wsa7f3sh55qg2xr3sgpvz18rlix6b3173r6"; depends=[]; }; - microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; }; - microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; }; microdemic = derive2 { name="microdemic"; version="0.4.0"; sha256="0i4pkrw02ad8ssvryndf7pxgk5wcyn4126yvl28fxk38249kvc9v"; depends=[crul data_table jsonlite tibble]; }; microhaplot = derive2 { name="microhaplot"; version="1.0.1"; sha256="0g15g7d19yz11nn2g0h8h2m8k1cvmpryz72pnalgv5yi58md5l5i"; depends=[dplyr DT ggiraph ggplot2 gtools magrittr scales shiny shinyBS shinyWidgets tidyr]; }; micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; @@ -10371,7 +10385,7 @@ in with self; { mnlogit = derive2 { name="mnlogit"; version="1.2.6"; sha256="0dfwpkl8g7ap5xr48smiv8vdbamd2r1liy9nwpsn0kcsr9cj65n9"; depends=[Formula lmtest mlogit]; }; mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; }; - mnreadR = derive2 { name="mnreadR"; version="2.1.3"; sha256="1vyri8kd5afr1hdy7lxh0bsb6zxkz4hcb0q6a8m4mmrizqav6v1q"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; + mnreadR = derive2 { name="mnreadR"; version="2.1.4"; sha256="11mfpf12pjpgvcih6q8l9fwspj2gy78fcirimzv7gn061nr4v7sg"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; mobForest = derive2 { name="mobForest"; version="1.3.1"; sha256="1g5yfs70abl7pacprijlwdq3l72aqkbqs09z1pmw64wv4wa1vm25"; depends=[modeltools party sandwich strucchange zoo]; }; mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; }; moc = derive2 { name="moc"; version="2.0"; sha256="0fgp8dg9qf7aw1qawmszlxs4bcccqmd87y4kkzdqggm807c2k5gh"; depends=[]; }; @@ -10392,7 +10406,7 @@ in with self; { modelDown = derive2 { name="modelDown"; version="1.0.1"; sha256="0rdpma8g461a17n6qsdvjb9s5nnhap1n05mavjy8cpj7d8j7ikkv"; depends=[archivist auditor breakDown DALEX devtools drifter DT ggplot2 kableExtra psych svglite whisker]; }; modelObj = derive2 { name="modelObj"; version="4.0"; sha256="1py2y80x37mmnl2y0pxdbhqkjrln6x210hg0g224d34lxk71m172"; depends=[]; }; modelStudio = derive2 { name="modelStudio"; version="0.2.1"; sha256="0fxrfd9ylgy39ivrvcg3gfvfbwbxwwrjx0bvgzibmvb6p8fg68qr"; depends=[iBreakDown ingredients jsonlite r2d3]; }; - modelbased = derive2 { name="modelbased"; version="0.1.0"; sha256="0jr29m536pn2v3h7vl898szl4cin8wll3mhl0gmx01a0naz9vsbx"; depends=[bayestestR effectsize emmeans insight parameters]; }; + modelbased = derive2 { name="modelbased"; version="0.1.1"; sha256="08ck275nfvskrnvlixclyz994bagwlc1gcca0qnh3x9mq9xcspiy"; depends=[bayestestR emmeans insight parameters]; }; modeldata = derive2 { name="modeldata"; version="0.0.1"; sha256="0dzjgb5g60hgqppxvzin8m51clkw8d89if7dw5ha46j2paw1n5r9"; depends=[]; }; modeldb = derive2 { name="modeldb"; version="0.2.0"; sha256="1qcgmv31gd1x0mzxq4lcarmswsr75qgq5zpfcwchxzrz97ncbwgd"; depends=[dplyr ggplot2 progress purrr rlang tibble tidypredict]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; @@ -10447,6 +10461,7 @@ in with self; { mosaicCore = derive2 { name="mosaicCore"; version="0.6.0"; sha256="1klw97h6lchw1cpcl8s637ikcl428cckmjq0czi7mibh9q9mw72z"; depends=[dplyr lazyeval MASS rlang tidyr]; }; mosaicData = derive2 { name="mosaicData"; version="0.17.0"; sha256="04z0mdm52mykqsxsinhmsihn181zf6cw321gayk2rjp7lj7mwdq9"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; + mosmafs = derive2 { name="mosmafs"; version="0.1.0"; sha256="1i12w3k9wcr7n28z8wwrrajclalfiwiavlf6i5whbn4z5wpnmh4l"; depends=[BBmisc checkmate ecr MASS mlr mlrCPO parallelMap ParamHelpers smoof]; }; mosum = derive2 { name="mosum"; version="1.2.3"; sha256="1xrrx0gaby5gbqssvhwracm8wny31lqzd64hkmr81s41z8srkxx9"; depends=[plot3D RColorBrewer Rcpp]; }; motmot = derive2 { name="motmot"; version="2.1.3"; sha256="09qsyc4ifdl316kjqqkarmflpjcd0ivkhx5fzi3502anj6dxpjnq"; depends=[ape caper coda ks mvtnorm Rcpp]; }; motoRneuron = derive2 { name="motoRneuron"; version="1.0.0"; sha256="1hdsf4c1v5hfaqpi5y1v60zqq5fdmlqdvzpsq77diclp9vzdshja"; depends=[dygraphs ggplot2]; }; @@ -10485,7 +10500,7 @@ in with self; { mratios = derive2 { name="mratios"; version="1.4.0"; sha256="0pjcwqx3zykpwyykwgqziwignd41sjm2s1blyjwc1lhymis4ldzq"; depends=[mvtnorm]; }; mrbayes = derive2 { name="mrbayes"; version="0.1.0"; sha256="0p0a1g6xv7g3scmn290ja4bicbdz5c9y6c4hfn4c7advd6ha6ang"; depends=[]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.2.1"; sha256="0kvzvbvw3ygx09bjil7wqw2345dzh1bkbaqdk4q5c1szk95rw93b"; depends=[fields maps Rcpp]; }; - mrds = derive2 { name="mrds"; version="2.2.0"; sha256="08m5a61rpbw5pv0v0yspihkzihcxazsh6w5kmfvg68s4akjwcnqi"; depends=[mgcv numDeriv optimx Rsolnp]; }; + mrds = derive2 { name="mrds"; version="2.2.1"; sha256="1prhzyps4sckl24d4fpmkafiawx8c0xdwiixn9fa3i2cxv9ia6hd"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; mregions = derive2 { name="mregions"; version="0.1.6"; sha256="0ix77hqcllhcpldchlnvciiflm6ysylynnnqvczpf8vx7gwa3lrk"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; mrfDepth = derive2 { name="mrfDepth"; version="1.0.11"; sha256="0x4z4agwbzlyzbkf6aj7y9061cm05dvhzpg05wc7k59xbq1ns1sv"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; @@ -10690,6 +10705,7 @@ in with self; { nasapower = derive2 { name="nasapower"; version="1.1.3"; sha256="1grfbj68vxsy50a0zylgfddwgr3ilrk2v60755vra9ckpmnf31zi"; depends=[APSIM crul curl jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; nat = derive2 { name="nat"; version="1.8.13"; sha256="12n81jzlzamnpkf5inczfc1x8qmfibszpkakpyc0q7r7wgpykbgv"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; + nat_nblast = derive2 { name="nat.nblast"; version="1.6.5"; sha256="0fp01rrvz7n84sdmfhi0wzd9mvg7wi682l4qg5dj82cm98v80l3p"; depends=[dendroextras nabor nat plyr rgl spam]; }; nat_templatebrains = derive2 { name="nat.templatebrains"; version="0.9"; sha256="0r0ydhxnax4x4gwp60bgarhgp59g4sis7msa3rq4kddv8qdi3gix"; depends=[digest igraph memoise nat rappdirs rgl]; }; nat_utils = derive2 { name="nat.utils"; version="0.5.1"; sha256="12g87ar795xfbz7wljksb24x9hqvcirjr50y4mbpx1427r0l7clv"; depends=[]; }; nationwider = derive2 { name="nationwider"; version="1.1.0"; sha256="01hp8igbvbn1qa203cdnlwnfzymjifzmzcyfaszzf9q4f17f07r8"; depends=[dplyr httr lubridate magrittr readxl rvest stringr tidyr xml2 zoo]; }; @@ -10748,6 +10764,7 @@ in with self; { netrankr = derive2 { name="netrankr"; version="0.2.1"; sha256="0csgi09ijp7ygwk7x057l9xjrzyhr7sav8hamh0p6i72l6719ssl"; depends=[igraph Rcpp RcppArmadillo]; }; netregR = derive2 { name="netregR"; version="1.0.1"; sha256="0n5absjra0imddz1spy1piij5rdz76wi4g568yby3rbhkm1896rs"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; + netstat = derive2 { name="netstat"; version="0.1.1"; sha256="1h87cl3ry5hwwqxza3n24zpvwn89hhclsa2400sw4ijdy2ivpn2j"; depends=[]; }; network = derive2 { name="network"; version="1.16.0"; sha256="0dnf1wl3za2lhx2lwd8smhlijl1cfhckgr8zz9piiirrfi2m2kx2"; depends=[magrittr tibble]; }; networkABC = derive2 { name="networkABC"; version="0.5-3"; sha256="0f3wbm76i8m9f52b0zvb2fvziqh43xy67llnv4lm54yj5szxvjr0"; depends=[network RColorBrewer sna]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; @@ -10790,7 +10807,7 @@ in with self; { nima = derive2 { name="nima"; version="0.6.1"; sha256="0rfb624pap2ga19vll6hbvjh2jr8dh3i1bj1h8qpqpb5nk6lkf4x"; depends=[assertthat dplyr ggplot2 ggthemes gridExtra gtools scales]; }; nimble = derive2 { name="nimble"; version="0.9.0"; sha256="04anz8xfkdv2c00hax305lycp0gzjspsq34hfgm3w51kz6nqzhpb"; depends=[coda igraph R6]; }; nimbleEcology = derive2 { name="nimbleEcology"; version="0.1.0"; sha256="195g1hcx7fyqx2la2ci88m2bykcnzrv27k4q4qq3z69c54fc5p7d"; depends=[nimble]; }; - nipals = derive2 { name="nipals"; version="0.5"; sha256="1zrn1ykl9scd988wj3mm0j6g5q6lq04iwn2ibgap1lrsd0rw1zbf"; depends=[]; }; + nipals = derive2 { name="nipals"; version="0.7"; sha256="14rq54qy4gc4l9f5h48vrsrh7sb0wzzxbvjn0zax82pz2fw6nybx"; depends=[]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; nlMS = derive2 { name="nlMS"; version="1.1"; sha256="01ijg1bp3r0dg8ph7qpsx3hqzrrvfhbykml20hqchxk7c5n2w9wz"; depends=[nlme]; }; @@ -10800,6 +10817,7 @@ in with self; { nleqslv = derive2 { name="nleqslv"; version="3.3.2"; sha256="1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"; depends=[]; }; nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; + nlist = derive2 { name="nlist"; version="0.1.0"; sha256="0i5appxx79fcv2g0frkzlv2yfym6kmmzbsk76rbh7ap8hram04jg"; depends=[abind chk coda purrr term]; }; nlme = derive2 { name="nlme"; version="3.1-143"; sha256="13iixbs2ibldc75rl7rav5n5kx33zwm33xnfw1yvlkpcqf38bd22"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; @@ -11243,7 +11261,7 @@ in with self; { palr = derive2 { name="palr"; version="0.1.0"; sha256="1v0bajsnzqamx9y275qhvzp56vzzs3hyp4mr5ijqynqj4376fqys"; depends=[]; }; pals = derive2 { name="pals"; version="1.6"; sha256="18bl15figc9mhlvxz71da6s2mzyja6rdb2cpm6h5vya1lpv3snmk"; depends=[colorspace dichromat mapproj maps]; }; pamctdp = derive2 { name="pamctdp"; version="0.3.2"; sha256="0qs8lj5g2fx5rfd0afv76x9x7wqm333qmjv6zzip6pf11dzkghyj"; depends=[ade4 FactoClass xtable]; }; - pamm = derive2 { name="pamm"; version="0.9"; sha256="01dv70ca3zif2b2fkx4xjl24x9p9kc63wf0dj5agdjp5qgbkp1p5"; depends=[gmodels lattice lme4 lmerTest mvtnorm]; }; + pamm = derive2 { name="pamm"; version="1.121"; sha256="191f0g90s1m3w68mszmdsdv5yw7xd1vsdbwsfvmyydgxn4261pwk"; depends=[lattice lme4 lmerTest mvtnorm]; }; pammtools = derive2 { name="pammtools"; version="0.1.14"; sha256="1zr8n6j9220qv3a2q309n1ckjd4b6l2k24kfx3p4wibam8g9pqbc"; depends=[checkmate dplyr Formula ggplot2 lazyeval magrittr mgcv msm mvtnorm purrr rlang survival tibble tidyr]; }; pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.56.1"; sha256="0ycpgkk23y3zzkb42n2skcyl35ps1n7jmyzfj7pbxr3f6gr2grfh"; depends=[cluster survival]; }; @@ -11257,7 +11275,7 @@ in with self; { panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; panelr = derive2 { name="panelr"; version="0.7.1"; sha256="0xd3f3acfjvnryhwdf3aqa3vgpagl87sgd7annn29rk3lznv8rv2"; depends=[crayon dplyr Formula ggplot2 jtools lme4 lmerTest magrittr purrr rlang stringr tibble]; }; panelvar = derive2 { name="panelvar"; version="0.5.2"; sha256="1rr7d0cyz6afxhwqslvcnbfb03cizpfldzwsfnkzxqmxpqasbw80"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; - pangaear = derive2 { name="pangaear"; version="0.8.2"; sha256="1dy8fgfsm6n88mchc8c6z918iih0myg04xh8hjhnss1idhy5206f"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; + pangaear = derive2 { name="pangaear"; version="1.0.0"; sha256="0i7k1sdhslw33dzpnrmajynq52svg8ri4mxz6aww2cah9y8vxlzl"; depends=[crul hoardr jsonlite oai png tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; papeR = derive2 { name="papeR"; version="1.0-4"; sha256="1sc336haqsx6825g7m0z3a4pjklrmnzkq4995dpqwhvdvcikk9jd"; depends=[car gmodels xtable]; }; paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; @@ -11377,7 +11395,7 @@ in with self; { pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; pcgen = derive2 { name="pcgen"; version="0.2.0"; sha256="1v2fmxbj9gz5sg0hizw03ad8cfm9v25708h7fvnf6gb42b2mmyb3"; depends=[ggm graph Hmisc lme4 MASS Matrix pcalg sommer]; }; pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; }; - pcmabc = derive2 { name="pcmabc"; version="1.0.4"; sha256="1s6j9353azn0561is4dlisi6lnam9ng2rlwdnrj7hpbhr3hskpxl"; depends=[ape distory geiger mvSLOUCH phangorn TreeSim yuima]; }; + pcmabc = derive2 { name="pcmabc"; version="1.1"; sha256="1x4qvs5v134z93j1r3zg08kynqyhgd2yc3y2vk0vif8mabvx3zv4"; depends=[ape mvSLOUCH phangorn TreeSim yuima]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.6"; sha256="0rpd1bgg932xhj03fnskhbg7ni9nfd8qrvxvix8qmbgw8bwdsbgd"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; pcr = derive2 { name="pcr"; version="1.2.0"; sha256="0817ibih6rs52g560z8cbw2zpr0hbzrz94c913x4114w1k737bq9"; depends=[ggplot2]; }; @@ -11438,7 +11456,7 @@ in with self; { perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; perccalc = derive2 { name="perccalc"; version="1.0.5"; sha256="14557k7khc3l5m0vlam0fvbsb6p78v9gfcnx5ksxcvrab28xj7p3"; depends=[multcomp tibble]; }; perfectphyloR = derive2 { name="perfectphyloR"; version="0.2.0"; sha256="00gvmn66lb9hfli7yc3l5913xpngib1vksg5zjnxqxiwdibjfqx8"; depends=[ape phytools Rcpp RcppArmadillo]; }; - performance = derive2 { name="performance"; version="0.4.2"; sha256="1pcjmqqm178dvdcpzkv5p4sj7glsppcny7znljb2nqkxh539a59p"; depends=[bayestestR insight]; }; + performance = derive2 { name="performance"; version="0.4.3"; sha256="1164585ywbnrcy7an57kifh2gdb6g08z9pxw75ywqdcfyd51i3dz"; depends=[bayestestR insight]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; periscope = derive2 { name="periscope"; version="0.4.7"; sha256="1kzk8vp7w3ki4z9arhf340hkbh44jzwf5p2lzyy5wx6z92s4lv5d"; depends=[DT ggplot2 logging lubridate openxlsx shiny shinyBS shinydashboard shinydashboardPlus]; }; @@ -11524,7 +11542,7 @@ in with self; { phreeqc = derive2 { name="phreeqc"; version="3.6.0"; sha256="17dv4c94y7z5yaqx1g8llbmwpg15pkkixkhmi5knyyvi2fd23vkl"; depends=[]; }; phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; - phuse = derive2 { name="phuse"; version="0.2.0"; sha256="0zbkh7j3i87c77k9z959gq676qn3aqnsx8lvm7jg99yl9p7i5znm"; depends=[git2r httr jsonlite RCurl rlist SASxport shiny stringr yaml]; }; + phuse = derive2 { name="phuse"; version="0.2.2"; sha256="0aihiz0gkvs7bq9f9fmfxsv7wk5yifcnmgnjl3y9qf2dzl5787bb"; depends=[git2r httr jsonlite RCurl rlist SASxport shiny stringr yaml]; }; phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; }; phyclust = derive2 { name="phyclust"; version="0.1-28"; sha256="0y6f4d4mnpgk841knbhaf73khbakjphim9x4sqrczgsrsjas596f"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; @@ -11594,7 +11612,7 @@ in with self; { pkgfilecache = derive2 { name="pkgfilecache"; version="0.1.2"; sha256="07x63w19fg7sl547501r2dx2ds5sfdfb29xvqrvjibf8265x25fw"; depends=[downloader rappdirs]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.3"; sha256="1isiywgm20rypc5qr03p0k7lis76zzd96x5ncbvia644d2n13brm"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; pkgload = derive2 { name="pkgload"; version="1.0.2"; sha256="0z7jvharafahi2gv5547mk1n499isjzw06kfwymmxc0gd575d1ii"; depends=[desc pkgbuild rlang rprojroot rstudioapi withr]; }; - pkgmaker = derive2 { name="pkgmaker"; version="0.27"; sha256="0spcamjncj78kzjps2rw4v1a4494yazv6xvhn0vmdflnypc8k8hp"; depends=[bibtex codetools digest magrittr registry stringi stringr withr xtable]; }; + pkgmaker = derive2 { name="pkgmaker"; version="0.31"; sha256="0cc6v6kpwxwwh7k7zyw13wqdp0f9qzzr1a7vv02lskgii54aa4nb"; depends=[assertthat bibtex codetools digest magrittr registry stringi stringr withr xtable]; }; pkgnet = derive2 { name="pkgnet"; version="0.4.0"; sha256="0da139p57xvy2v5ld3mnddgak59zjr58ndnbgg3y8msni80g52gq"; depends=[assertthat covr data_table DT futile_logger glue igraph knitr magrittr R6 rlang rmarkdown visNetwork]; }; pkgsearch = derive2 { name="pkgsearch"; version="3.0.2"; sha256="1dvlqav7hp43x30rmwr8h3dscc0hc01i6mfc7hxvf7ny1rzckfv0"; depends=[assertthat httr jsonlite parsedate prettyunits tibble]; }; pkgverse = derive2 { name="pkgverse"; version="0.0.1"; sha256="0lsv7s9vsjvfpy19nxbdlbm363j01wwqqnrp0nlrik590hfq4w83"; depends=[devtools usethis]; }; @@ -11845,7 +11863,7 @@ in with self; { prettycode = derive2 { name="prettycode"; version="1.1.0"; sha256="1ifh9h73szc23p1ii77z0r68n1gghndqqdm07wd7gxsg5pppp1sg"; depends=[crayon]; }; prettydoc = derive2 { name="prettydoc"; version="0.3.1"; sha256="02x4vf7rr4gazz6mmygynqnjs016jhjb2gg109sqrs0nwk1blcm9"; depends=[rmarkdown]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; - prettyunits = derive2 { name="prettyunits"; version="1.1.0"; sha256="0453vvslpkj1ysyv0cy9hw98q5wlnj7bvvz7vzl5ld8ij82lwy5c"; depends=[]; }; + prettyunits = derive2 { name="prettyunits"; version="1.1.1"; sha256="1ibmzgknw5896q2i6r59jz2izblxwgb29ivvjzx50pkd1jl9l6cs"; depends=[]; }; prevR = derive2 { name="prevR"; version="3.4.0"; sha256="1y61ggqjf3b2a5f9zprbp9ylfkcfk0jiqfymkyqci9figsnahdy1"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; prevederer = derive2 { name="prevederer"; version="0.0.1"; sha256="0vkx9nrlgp36xbl95lrb5sb5yivxlcw4yvbs8hgbm31kh0vbz32f"; depends=[httr]; }; @@ -11856,7 +11874,7 @@ in with self; { primePCA = derive2 { name="primePCA"; version="1.0"; sha256="0kpyqv3l58xcyd98a7c7ggsna30j6k62aliidlyxgv2ya0g0dshv"; depends=[MASS Matrix softImpute]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; primer = derive2 { name="primer"; version="1.1.1"; sha256="1hw7qd0xq3bvzk5ms9q568a3nkj3ws4jnzbmlypy8c5x3ly6pl1d"; depends=[deSolve lattice]; }; - primerTree = derive2 { name="primerTree"; version="1.0.4"; sha256="15am88swc9h8igjnjqr4jg105i91lsl28nncqly03cgy4vm814kk"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr reshape2 scales stringr XML]; }; + primerTree = derive2 { name="primerTree"; version="1.0.5"; sha256="1ymj4y0a8pd0r15bsqilm03b2n0a633ibzzp2h0qkv880xqbikz4"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr RCurl reshape2 scales stringr XML]; }; primes = derive2 { name="primes"; version="0.1.0"; sha256="0hhkgpkadvai9xcivfalsvr5w0irsxygyz3p2zngwl3g5rvvh5g9"; depends=[Rcpp]; }; princurve = derive2 { name="princurve"; version="2.1.4"; sha256="1b3grra328wkfsmqkkwp3lwdzhbdiwyq380qi5pl9r2jc6arnppj"; depends=[Rcpp]; }; prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; @@ -11906,6 +11924,7 @@ in with self; { progenyClust = derive2 { name="progenyClust"; version="1.2"; sha256="0azp5pvk316s8xbawcqwqfd80fxb4xn8hc6aq87xwksc6fhwp94l"; depends=[Hmisc]; }; prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.2.2"; sha256="0dgzb362641aqm8xd88iqa8jmpdm43xs0aba0d5kk6fvapnxi95l"; depends=[crayon hms prettyunits R6]; }; + progressr = derive2 { name="progressr"; version="0.4.0"; sha256="1wgqabp8qmg58gymv3wq9ci5mp64isbdgg1by5s9g8ncwyhnfalb"; depends=[digest]; }; proj4 = derive2 { name="proj4"; version="1.0-8.1"; sha256="0zhal76wd9k8l1hjm00sgzlxi6c2sc7l8msr9firzmsg07qai8m3"; depends=[]; }; projections = derive2 { name="projections"; version="0.3.1"; sha256="12vskql6x04jzik72a0vx83amfj01w9f7mxn052vsv7aaljbi124"; depends=[distcrete ggplot2 incidence]; }; projects = derive2 { name="projects"; version="2.0.0"; sha256="0m9177ldp0d3f9k2ifrbww5snhvaql8h96shcdm46i1kjnzj4070"; depends=[dplyr fs lubridate magrittr purrr readr rlang rstudioapi sessioninfo stringr tibble zip]; }; @@ -11972,10 +11991,10 @@ in with self; { psychReport = derive2 { name="psychReport"; version="0.7"; sha256="1dapzq20aw9l4r5grfjd2sf14ga3wcxg67pq5fj6q4bcg5dggc9l"; depends=[cli crayon dplyr ez testthat xtable]; }; psychTools = derive2 { name="psychTools"; version="1.9.12"; sha256="1l1q3l6i40kkbvfjx7nri21jqy9vhdbcc7b5g56a5cqdimkddvkn"; depends=[foreign psych]; }; psychmeta = derive2 { name="psychmeta"; version="2.3.4"; sha256="0nbgv7abi9i96piqggq9gsyv5p4x2h3rnr50f347mnfg55syha18"; depends=[boot cli crayon data_table dplyr ggplot2 MASS metafor nor1mix progress purrr RCurl reshape2 rlang stringi stringr tibble tidyr tmvtnorm xml2]; }; - psycho = derive2 { name="psycho"; version="0.4.91"; sha256="0yfjgsxkbp878phjvxyb2caiy5nkknkv66294arqvmadh4an7ip3"; depends=[BayesFactor blavaan broom DescTools dplyr emmeans ggcorrplot ggplot2 lavaan lme4 lmerTest loo MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm rstantools scales stringr tibble tidyr]; }; + psycho = derive2 { name="psycho"; version="0.5.0"; sha256="0vcabk9j1yf7nz8fh3xg5rr2ia97mfkka23vbv9jya75dhgd84h2"; depends=[bayestestR dplyr effectsize ggplot2 insight parameters performance scales stringr tidyr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-7"; sha256="16dh2y2z37h72ym1dv2xg0v20wjzlnp06h8f923cdy1zigk69d2r"; depends=[flexmix Formula lattice modeltools psychotools]; }; - psychonetrics = derive2 { name="psychonetrics"; version="0.4.1"; sha256="1i79hs2433qlg4qj62dwxbaz9p07byr9fy46dkqaibs5shkf03xh"; depends=[abind corpcor crayon dplyr glasso lavaan magrittr Matrix matrixcalc mgcv mvtnorm numDeriv optimx pbapply pbv qgraph Rcpp RcppArmadillo ucminf VCA]; }; + psychonetrics = derive2 { name="psychonetrics"; version="0.5.1"; sha256="1sa0dkicr7v0wxi0b900zx43z30bcf9pzdw7kihcnykjd8q3vzwd"; depends=[abind corpcor crayon dplyr glasso IsingSampler lavaan magrittr Matrix matrixcalc mgcv mvtnorm numDeriv optimx pbapply pbv qgraph Rcpp RcppArmadillo ucminf VCA]; }; psychotools = derive2 { name="psychotools"; version="0.5-0"; sha256="145x1zdjvasdyf72hp6wdsw0m1r5c97gzzlbnnmdbcrjqh5zyglb"; depends=[]; }; psychotree = derive2 { name="psychotree"; version="0.15-2"; sha256="0svb3i3d9r3hvqh17lfzyzj2rnf2wm1wy6sspx67ngdrfy6d1p91"; depends=[Formula partykit psychotools]; }; psymonitor = derive2 { name="psymonitor"; version="0.0.2"; sha256="09288w2bk5jhnbyj516jqn5qb33yqqg5kqbg6ylqk7anlq2yg2sl"; depends=[doParallel foreach magrittr]; }; @@ -12324,6 +12343,7 @@ in with self; { rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; + rarms = derive2 { name="rarms"; version="1.0.0"; sha256="11wjxd3pxvjv1j2nz26l8f0kykk9w6lf08izhivfngp63dk2akns"; depends=[jsonlite]; }; rasciidoc = derive2 { name="rasciidoc"; version="2.0.1"; sha256="0mj3qn048ppxddq2ml06hvccixxg7kvb9rsx9iy9mn4rr2caw67v"; depends=[document highr knitr]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.3-3"; sha256="03jqf5y5vj354m9psp81wzw6d7dfqr76bfjqv9kannsakkj587sy"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; @@ -12349,7 +12369,7 @@ in with self; { rawr = derive2 { name="rawr"; version="0.1.0"; sha256="1a8r1vyvki3z2ms4miqv6wq9pzympgifsjx0pzzs6f4b40m083lq"; depends=[dplyr jsonlite rvest xml2]; }; raws_profile = derive2 { name="raws.profile"; version="0.1.0"; sha256="04f7wk7x9j3rb6nn3zqss9vw0h9a4vpcjyilc2vqy0fm2by41xkg"; depends=[stringr tibble withr]; }; rayrender = derive2 { name="rayrender"; version="0.4.2"; sha256="070h6p7dmai0rrdiyghr97i3jn9yj86ak74zvw019b6g50rid6h6"; depends=[assertthat magrittr png progress purrr raster Rcpp RcppThread tibble]; }; - rayshader = derive2 { name="rayshader"; version="0.13.2"; sha256="1s2n862s7wwgqwy28j02g68k5xdxzx115qvv205shwgrpy5aszz8"; depends=[doParallel foreach ggplot2 imager magrittr png progress raster rayrender Rcpp RcppArmadillo rgl scales]; }; + rayshader = derive2 { name="rayshader"; version="0.13.7"; sha256="0mlygrsbg0nzz8hhz0q28hizqh3ck4vdi67i9cvgpkrrnm13jyqx"; depends=[doParallel foreach ggplot2 magrittr png progress raster rayrender Rcpp RcppArmadillo rgl scales]; }; rbacon = derive2 { name="rbacon"; version="2.3.9.1"; sha256="0gnvi0aaw4yyg1cvrdyps2590gx1lwcjl21y4q9zn3k00mnwmc12"; depends=[coda Rcpp]; }; rbart = derive2 { name="rbart"; version="1.0"; sha256="1byfm1ycw9nfhdblqklyn8pxn6b9q5fa3inbgfpynqpsid97ig35"; depends=[Rcpp]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; @@ -12438,7 +12458,7 @@ in with self; { rdwplus = derive2 { name="rdwplus"; version="0.1.0"; sha256="1y4dnm2bb0w6pim4h79mv2km88s78vhsn5fhs7z45m0564hgk0x2"; depends=[raster rgrass7]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reReg = derive2 { name="reReg"; version="1.2.1"; sha256="0nfi02wlmb1n8j134qgv3p03z2j200kkrwhvd5i17ybhzpwfndri"; depends=[BB ggplot2 MASS nleqslv reda scam SQUAREM survival]; }; - reactR = derive2 { name="reactR"; version="0.4.1"; sha256="0fzx0qy9s366gd81xiz36k3v4d9sdsrrf3m5azlghvbvq5h42wxv"; depends=[htmltools]; }; + reactR = derive2 { name="reactR"; version="0.4.2"; sha256="11rahxskch0r5hlqs7iy285dlhrmzm4vl18kbakx4jggwjqh61f5"; depends=[htmltools]; }; reactable = derive2 { name="reactable"; version="0.1.0"; sha256="00ydsx8g27a40qwnkp593dd9pn62r32riry9ayhv3nzqa6mwzb4d"; depends=[digest htmltools htmlwidgets jsonlite reactR]; }; reactlog = derive2 { name="reactlog"; version="1.0.0"; sha256="1pajxd9k208s06sava2gqip22pzwlyslnfvkbkfw47mp4wb7zmk9"; depends=[jsonlite]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; @@ -12599,7 +12619,7 @@ in with self; { reshape = derive2 { name="reshape"; version="0.8.8"; sha256="0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad"; depends=[plyr]; }; reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; - respirometry = derive2 { name="respirometry"; version="1.0.1"; sha256="1syc2gf3jri90pi0qmrhwg472rn6dx8abpr9yb8jb5q1f1qs07p0"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; + respirometry = derive2 { name="respirometry"; version="1.0.2"; sha256="10dfy1xx2214x4lk0nxxi8c2h8j47gd8w004ic016j3m7a1vp3jd"; depends=[birk lubridate marelac measurements minpack_lm PKNCA seacarb segmented]; }; restatapi = derive2 { name="restatapi"; version="0.6.2"; sha256="0mp5bd867w669w6219296ymzqn35nd306yfjb5pbi03sirqmk4lr"; depends=[data_table rjson xml2]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; @@ -12677,7 +12697,7 @@ in with self; { ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; ri2 = derive2 { name="ri2"; version="0.1.2"; sha256="0z6mbhrda7fh7a4y2kx3mf1zc1p0k4d76phw3187w50kwvkpb737"; depends=[estimatr generics ggplot2 pbapply randomizr]; }; ribd = derive2 { name="ribd"; version="1.0.0"; sha256="1r3w8zfihs5i1al0g136319zaj2dr0x52s3spxrcvd0irq9r4v8b"; depends=[glue kinship2 pedtools slam]; }; - riceidconverter = derive2 { name="riceidconverter"; version="1.0.5"; sha256="10r869fxry4056izaar1yjyl8ad2wyy6fvbrzwbxd76fifq49l7j"; depends=[dplyr]; }; + riceidconverter = derive2 { name="riceidconverter"; version="1.0.6"; sha256="1p3dzlvsbf51igmq3m3m9vy023l9ybi81zdqbcqmbpa581zlg52x"; depends=[dplyr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; ridge = derive2 { name="ridge"; version="2.4"; sha256="18a16653k850sfxw9rmk4spy44hn93i97b2a0jfx41qh43hmkgqy"; depends=[]; }; @@ -12724,7 +12744,7 @@ in with self; { rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.4.2"; sha256="0fczcp17kaz3s4p0nd4126bppwl20vpxfybhsndpcky9h75wklgv"; depends=[]; }; + rlang = derive2 { name="rlang"; version="0.4.3"; sha256="0qsqfikbsj55x5brghnkzzp7pz0japr4xnzm993f668mlls3f6i4"; depends=[]; }; rlas = derive2 { name="rlas"; version="1.3.4"; sha256="0ccdbg634ibdjh1c7bri4l6achfrb4agy4iilr4z1pc1yzgsnk6r"; depends=[BH data_table Rcpp]; }; rlc = derive2 { name="rlc"; version="0.2.0"; sha256="083pkajxshckk3hqg7q87jdmiqg9a1jp5lwar6f5r4nqna4kf3xa"; depends=[hwriter jrc jsonlite plyr R6 stringr]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; @@ -12784,7 +12804,7 @@ in with self; { rnetcarto = derive2 { name="rnetcarto"; version="0.2.4"; sha256="0fk5rym6zp049bl1f7bkl2231mjh3pgnxn0nhvmzpsah08rh4rr6"; depends=[]; }; rngSetSeed = derive2 { name="rngSetSeed"; version="0.3-2"; sha256="00mqjjkhbnvxqkf1kz16gipsf98q62vmhx9v8140qs7c4ljbhc3a"; depends=[]; }; rngWELL = derive2 { name="rngWELL"; version="0.10-6"; sha256="0pjjcs9pqj7mf0mhb2cwd0aanqpwnm65bm86hk6mi2vw8rgnj2vv"; depends=[]; }; - rngtools = derive2 { name="rngtools"; version="1.4"; sha256="1kivj594bn774lbn29ws2rmzy2km99sza0j3jqvhal6hwmk27a9s"; depends=[digest pkgmaker stringr]; }; + rngtools = derive2 { name="rngtools"; version="1.5"; sha256="0xgmg3qb6insc157as47mcm9sdjdpy9jirh7w06bxb7pfcxqfx42"; depends=[digest]; }; rngwell19937 = derive2 { name="rngwell19937"; version="0.6-0"; sha256="0m6icqf7nckdxxvmqvwfkrpjs10hc7l8xisc65q8iqpnpwl5p2f6"; depends=[]; }; rnn = derive2 { name="rnn"; version="0.9.8"; sha256="1f1h7x9vff0jrdkv1gpxlmlr5v1c81gsfxy4z83rq3v0drpxahnv"; depends=[shiny sigmoid]; }; rnoaa = derive2 { name="rnoaa"; version="0.9.5"; sha256="123gzgycv8lnx9dikkqjn2fhnpzlwgxdmzkvdvf3kgwl1gw9170b"; depends=[crul dplyr geonames ggplot2 gridExtra hoardr isdparser jsonlite lubridate rappdirs scales tibble tidyr tidyselect XML xml2]; }; @@ -12797,7 +12817,7 @@ in with self; { robFitConGraph = derive2 { name="robFitConGraph"; version="0.1.0"; sha256="092nc0xnjs2zxd9ij0dl1xggb8mwl8nly284yjhhygmwlwsvhzxm"; depends=[MASS mvtnorm Rcpp]; }; robcbi = derive2 { name="robcbi"; version="1.1-3"; sha256="0rj732qdd0wd9d9pxldnsw5rif5d7wz327iydvxcf5x8lgvk42jd"; depends=[robeth]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; - robcp = derive2 { name="robcp"; version="0.2.4"; sha256="1pvd8dw0kgwxrwnafaraya1qm3cwnp2c3ma569i7nwm2xsys76xj"; depends=[]; }; + robcp = derive2 { name="robcp"; version="0.2.5"; sha256="023g9w26bxia873qblscdcf50r7qv5hknwdx45dqbr3r778ls8bn"; depends=[]; }; robeth = derive2 { name="robeth"; version="2.7-5"; sha256="0jz3ivck9ma8x03sz41zkln3qh70ckfm5c2l57nlxi0ci5h0dfh2"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1.2"; sha256="0mvpaf6g694b7175bl3yr6lxbwla4pwp7g4y34qb4klgl5n3nw03"; depends=[lattice MASS robustbase]; }; @@ -12824,7 +12844,7 @@ in with self; { robustlmm = derive2 { name="robustlmm"; version="2.3"; sha256="1rfiz29wy20srwd24ja42fh51ng9vyqrkjbb2dzvsqf663hsf1q0"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; robustloggamma = derive2 { name="robustloggamma"; version="1.0-2.1"; sha256="1lj0479jgpfdn0886ap9j0vcajr1h30g30yy8vn844z9sbq45d47"; depends=[numDeriv RobustAFT robustbase survival]; }; robustrank = derive2 { name="robustrank"; version="2019.3-7"; sha256="1wqfr6l7vzx8yjvj8f03djdr5srdql0gl041mgnbrc3r4n7ajg7x"; depends=[kyotil]; }; - robustrao = derive2 { name="robustrao"; version="1.0-3"; sha256="0gcxxizsg380blrv55vl9f3az8gnr274c6idi0pimhh5c26h7ma6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; + robustrao = derive2 { name="robustrao"; version="1.0-5"; sha256="1r8v9qjx70s8swh09imq9kzdxg0qhnmk00zrg939mig9b12mw1p6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-11"; sha256="08c6dyzki68hzl006s12bkjiirlw2n2isirjh8b79sd6zjrjlh72"; depends=[Matrix Rcpp RcppArmadillo]; }; robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; }; robvis = derive2 { name="robvis"; version="0.3.0"; sha256="0xzvx3230ydd082jmdlm70vyhjizknngfzhvcbqpdcm403klni5h"; depends=[ggplot2 scales tidyr]; }; @@ -12872,6 +12892,7 @@ in with self; { rotl = derive2 { name="rotl"; version="3.0.10"; sha256="0fh7fmaylv9490yhw6sknv03xmx5isp29mlr0xypyh6mwagngd1q"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; rotor = derive2 { name="rotor"; version="0.2.4"; sha256="0m947mihnxjzsb64p5dgi4v1y1g3c172xlhdg08nzb2z21qg4r73"; depends=[dint R6]; }; roughrf = derive2 { name="roughrf"; version="1.0"; sha256="0nwdynqfb9yzjvi1lykgdkch3b4g09aj8vbd6sf5pyx473s066y4"; depends=[mice nnet randomForest]; }; + round = derive2 { name="round"; version="0.12-1"; sha256="0smvyszxvq5c5p1mhkpcjphnmijjxn05n70xvg5syij200gn60fm"; depends=[]; }; roundhouse = derive2 { name="roundhouse"; version="0.0.1"; sha256="142dw9ky6fyp5n8zf5lymx083gi56q6wxj4jm0m8cjb0khiqw2lq"; depends=[httr jsonlite]; }; routr = derive2 { name="routr"; version="0.4.0"; sha256="1vswq7vm80nwb50grr4cs290kbq5lx9b19dq0c2wlp9d2dxk50si"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; @@ -12957,7 +12978,6 @@ in with self; { rscorecard = derive2 { name="rscorecard"; version="0.14.0"; sha256="0r951j0n841ihlig2aw76vxdd31zbx98k4sz92nmi8zb69669d5w"; depends=[dplyr httr jsonlite lazyeval magrittr purrr tidyr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; rsdmx = derive2 { name="rsdmx"; version="0.5-13"; sha256="1lgy5nbrl4frfn805lghyx1gl2h8lkvgk07365jyvb8rzfcl43av"; depends=[plyr RCurl XML]; }; - rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; rsf = derive2 { name="rsf"; version="0.2.0"; sha256="0p9h61nvr5p42c7cjqgsvv45ycircw8jd4h3075rly08jbp02nim"; depends=[bookdown knitr magrittr rlang usethis yaml ymlthis]; }; @@ -13018,9 +13038,9 @@ in with self; { rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; rtrim = derive2 { name="rtrim"; version="2.0.6"; sha256="18fvi8zbf9dqwi5x0sgy2aay5565ldvqpispqqb5gx2lwb9qra2r"; depends=[]; }; rts = derive2 { name="rts"; version="1.0-49"; sha256="086zlmcjsv7a38k1jfzq2vhlmx7nivhffcz83i57hl6wbkjl7gv2"; depends=[raster RCurl sp xts zoo]; }; - rtsdata = derive2 { name="rtsdata"; version="0.1.1"; sha256="1xh5wsc330x49zcid8hpv9jarbp64dgq10k6lbjjsx1n7dg9qm3z"; depends=[alfred anytime curl data_table mongolite Quandl quantmod xts zoo]; }; + rtsdata = derive2 { name="rtsdata"; version="0.1.2"; sha256="0h0zk8vy21xh0n6pcipgml0b0f4pfi94q6hjdqkxd3xsa6a5scra"; depends=[alfred anytime brotli curl data_table mongolite Quandl quantmod xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; - rtsplot = derive2 { name="rtsplot"; version="0.1.1"; sha256="0dkv8pl2937zfpcwyy9ms1ak29nv9mxyb8w6bh2ns8figjp11zmp"; depends=[quantmod RColorBrewer xts zoo]; }; + rtsplot = derive2 { name="rtsplot"; version="0.1.2"; sha256="1y2is2n2r0xz71ajvxqc22qg8dzidrzq475a7nc7xjgfriayx535"; depends=[quantmod RColorBrewer xts zoo]; }; rtweet = derive2 { name="rtweet"; version="0.7.0"; sha256="05pbvxm2vmf6935b9s6663k3aifnkr3m52wh2jvnplmrwyrfpn9n"; depends=[httpuv httr jsonlite magrittr progress Rcpp tibble]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; rtypeform = derive2 { name="rtypeform"; version="2.0.0"; sha256="00as49l9plncc25bn93x36hpxnxachsh382ivhq6k9d9gi8424c0"; depends=[dplyr glue httr jsonlite lubridate purrr tibble tidyr]; }; @@ -13048,7 +13068,7 @@ in with self; { rversions = derive2 { name="rversions"; version="2.0.1"; sha256="1ic6sxnyya24d5xsxjg3fba73fhya9fhs0kaf66yha6nwxj1zv2i"; depends=[curl xml2]; }; rvertnet = derive2 { name="rvertnet"; version="0.7.0"; sha256="01z3ij5z21v901hz4l9173r4pa9jz2nl7bx086ka1bxvcy0dgqgj"; depends=[crul dplyr ggplot2 jsonlite maps]; }; rvest = derive2 { name="rvest"; version="0.3.5"; sha256="0r0a5jic09xw5pk0x42pr99r3zab5m9s4x85ymx1sl769jz42zqf"; depends=[httr magrittr selectr xml2]; }; - rvg = derive2 { name="rvg"; version="0.2.2"; sha256="0f74ja8frkfgb5hhsdydirn7v6hhylmq5wbay9p0z2ac16xrslrd"; depends=[gdtools officer Rcpp rlang xml2]; }; + rvg = derive2 { name="rvg"; version="0.2.3"; sha256="1psqjwn80vqfvfl9hyx0rabqrrlqp34hrwrbg8ghsd65f0f1ncgm"; depends=[gdtools officer Rcpp rlang xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; rviewgraph = derive2 { name="rviewgraph"; version="1.2"; sha256="0qw1fdfwg2763a1k1qmryblw5rpagsi5p70rs7fj256zfcjvwrz8"; depends=[rJava]; }; rvinecopulib = derive2 { name="rvinecopulib"; version="0.5.1.1.0"; sha256="1616xqchjyqqf2nmgx5rlpnw8g4696lvlpmrx7jav2cnvkff7s2i"; depends=[assertthat BH kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; @@ -13132,6 +13152,7 @@ in with self; { sankey = derive2 { name="sankey"; version="1.0.2"; sha256="0jvcr2bn69aklfbgj4hbsrc047mymrx0jmsg26m0g6w7n1igqvcw"; depends=[simplegraph]; }; sankeywheel = derive2 { name="sankeywheel"; version="0.1.0"; sha256="1sigj4jz13qj4s8vxk0dl2xsddqgyfxabj8yggkasawm7pryvbyy"; depends=[htmlwidgets]; }; santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; }; + santoku = derive2 { name="santoku"; version="0.3.0"; sha256="019wdskp1i9y7z858mwhx5k2r3zk3wq52g9fwmf66dydlf6l1yky"; depends=[assertthat Rcpp]; }; sanzo = derive2 { name="sanzo"; version="0.1.0"; sha256="1fqsx2mgjsy6vjvsp2avi2i5cw7cjs2p53l1z6hb3bzid3067s87"; depends=[]; }; saotd = derive2 { name="saotd"; version="0.2.0"; sha256="1rhkhsnmh3nf7y0x5sl3mmr5mismz8m92gj0v12niysalcywiarh"; depends=[dplyr ggplot2 ggraph igraph ldatuning lubridate magrittr maps plyr purrr reshape2 scales stringr tidyr tidytext topicmodels twitteR widyr]; }; sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; }; @@ -13450,6 +13471,7 @@ in with self; { shinylogs = derive2 { name="shinylogs"; version="0.1.7"; sha256="1b4p0g1vf9wn643rybf382mw6mrrl49qsykh7npa3agcarwznmgr"; depends=[anytime bit64 data_table DBI digest htmltools jsonlite nanotime RSQLite shiny]; }; shinymanager = derive2 { name="shinymanager"; version="1.0.100"; sha256="1ls5qg4zmqvapxcbkp4jk8r8rqmd223mb9s2hqq022hbyglclhxk"; depends=[billboarder DBI DT htmltools openssl R_utils R6 RSQLite shiny]; }; shinymaterial = derive2 { name="shinymaterial"; version="1.0.0"; sha256="1mgvxhk2ky3612ci9f1zz8x7z37r176kw1j0b4bs2843gmnxjfga"; depends=[jsonlite shiny]; }; + shinypanels = derive2 { name="shinypanels"; version="0.5.0"; sha256="1rslz9wl3gx11dm6il77j4k5swxvcfy5mf0zffbs4zk8xjgpzzj6"; depends=[glue htmltools shiny shinyjs]; }; shinyrecap = derive2 { name="shinyrecap"; version="0.1.0"; sha256="1mic7azxz2in67g3a2ir550w8psh6kc75p6hja6m62a0yy7j2n92"; depends=[CARE1 coda conting dga future ggplot2 ipc LCMCR promises Rcapture reshape shiny shinycssloaders testthat]; }; shinystan = derive2 { name="shinystan"; version="2.5.0"; sha256="18alf5kiqw7y2l6m5nxxizwc2znsf9frxfsqhvgcad8hld9cbya5"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; shinytest = derive2 { name="shinytest"; version="1.3.1"; sha256="1qn46kgqxfbfimghy5d200rmxpmbp7ckl7dm82m4bnrsf9ivzlgg"; depends=[assertthat callr crayon debugme digest htmlwidgets httpuv httr jsonlite parsedate pingr R6 rematch rstudioapi shiny testthat webdriver withr]; }; @@ -13488,6 +13510,7 @@ in with self; { signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.5"; sha256="1d4v6cbvcbi8pb5zmn58s01h3jb0kv7yr7qvcnx4p2v82knvhik7"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; + signnet = derive2 { name="signnet"; version="0.5.0"; sha256="0m3bb1m1zqvfn1ym4nfp9364bfgryz2clqi7ls5bnwpkn2vznyqq"; depends=[igraph Matrix Rcpp RcppArmadillo]; }; signs = derive2 { name="signs"; version="0.1.2"; sha256="0dzf5pydvs93rvj6idw9l2asv1bxwz20df7qis2db84hfww2kc6m"; depends=[rlang scales]; }; sigora = derive2 { name="sigora"; version="3.0.5"; sha256="1240q42kpb4l1idanywzal7c85kp3ncdl5m2irh8qs5xrs02gdc7"; depends=[]; }; sigr = derive2 { name="sigr"; version="1.0.6"; sha256="01crx8r9bcq1kwlq66vypnv1r48fp3hbl06ykd8g2k5zm06w0yyi"; depends=[wrapr]; }; @@ -13565,7 +13588,7 @@ in with self; { sitree = derive2 { name="sitree"; version="0.1-7"; sha256="08yamivn2vxgrizh5gvvr9cn3cn1657r0p2nrkwbqljqrhmzi7qd"; depends=[data_table lattice latticeExtra]; }; sitreeE = derive2 { name="sitreeE"; version="0.0-5"; sha256="16m8w0rxb40pimzd06znqskz74jk4rrki4gjy8nk24r1zih2cjq1"; depends=[data_table sitree]; }; sizeMat = derive2 { name="sizeMat"; version="1.1.0"; sha256="1pxb99gd0zfrpbq2ndmhciv2bc8xdfgm0q1y771f6ji5665qxgfw"; depends=[MASS matrixStats MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.8.1"; sha256="0rmfc2pq80w0kxh6icljhqm31q580s0czvllsfxk6crmpyfgxkp7"; depends=[bayestestR dplyr effectsize forcats ggeffects ggplot2 ggrepel glmmTMB insight knitr lme4 magrittr MASS modelr parameters performance psych purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; + sjPlot = derive2 { name="sjPlot"; version="2.8.2"; sha256="16721a5006q0gv45zjcwnkykxhjkzpq5n35vhik0g0ixgm3a2vci"; depends=[bayestestR dplyr effectsize forcats ggeffects ggplot2 insight knitr MASS parameters performance purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; sjlabelled = derive2 { name="sjlabelled"; version="1.1.2"; sha256="1vnx067mxnvz4jzhmpiarda8ln6habzj02qikvkix5piiy85sqcw"; depends=[haven insight]; }; sjmisc = derive2 { name="sjmisc"; version="2.8.3"; sha256="0w8l9grmp4q775jrf4q6rxx36ld5daz9b0gdxyyh42xfihk6m62h"; depends=[dplyr insight magrittr purrr rlang sjlabelled tidyselect]; }; @@ -13637,7 +13660,7 @@ in with self; { smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; - smoothr = derive2 { name="smoothr"; version="0.1.1"; sha256="03pqvblrw0qj55gncn6a3hb0y0y64k8v1a2a8g64p53jjmlrw9nv"; depends=[sf units]; }; + smoothr = derive2 { name="smoothr"; version="0.1.2"; sha256="0226l760rwvxkabz2r0zzpsbh1kbd65jx5xr1plqyq3gvqh1176q"; depends=[raster sf units]; }; smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; smoots = derive2 { name="smoots"; version="1.0.1"; sha256="1kk1hvfqxslg76gy8gzaidv3d55pflyvbv3ski6rkk0l9lwbb2q1"; depends=[]; }; smotefamily = derive2 { name="smotefamily"; version="1.3.1"; sha256="062yps71bqnyff1hzqb7yvigvqg2lnc24r9gfp8m3zhvmyprk3cp"; depends=[dbscan FNN igraph]; }; @@ -13719,8 +13742,9 @@ in with self; { sotkanet = derive2 { name="sotkanet"; version="0.9.48"; sha256="1jw9agj92zzgad5kk9z6smjacimwinci6aaqlzmshivb8g8rv8zp"; depends=[RCurl rjson]; }; sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; + soundcorrs = derive2 { name="soundcorrs"; version="0.1.0"; sha256="1q02ll4yw7dlz3cmxb7i1svhpjmhxqglsswv1drlkzm8i3gfp9dk"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.6.0"; sha256="0kdlv0kxhr5r1cdls1g7pf2lyphwmvhv049s8aa31i2dlrm21j1y"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="1.6.1"; sha256="1mbxgl7mf4gyr13xf8i5hachlmv1l3khyjwzawb3rm5wl5k7pr81"; depends=[dtw mvtnorm phonTools reshape2 seewave shiny shinyBS shinyjs tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; @@ -13813,9 +13837,9 @@ in with self; { spatialwarnings = derive2 { name="spatialwarnings"; version="1.3.1"; sha256="139m6jaw6f5gglwqrd4f5mzr4vkqk2r1a069971y7ap2klzzbhns"; depends=[ggplot2 plyr Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; spatialwidget = derive2 { name="spatialwidget"; version="0.2"; sha256="105pgsv4dq3pmk9bylb3fxzvp44frfp6xcvq5d01ja4gnwmb35p2"; depends=[BH colourvalues geojsonsf jsonify rapidjsonr Rcpp]; }; spatsoc = derive2 { name="spatsoc"; version="0.1.9"; sha256="1s7vhn3ywsdp91z4psx7nairxcfhblzyvx44v4an4rwhvvhvys3c"; depends=[adehabitatHR data_table igraph rgeos sp]; }; - spatstat = derive2 { name="spatstat"; version="1.62-2"; sha256="0frmm14rlhfmhby5zxjg6ngck66v85j0x8yz7r7gnx1x3g2ivk2p"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; + spatstat = derive2 { name="spatstat"; version="1.63-0"; sha256="0sda6gj4w06fcsamvxwvvwnxhj90ridj16v7mp8diiv463v8rca3"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; spatstat_Knet = derive2 { name="spatstat.Knet"; version="1.11-2"; sha256="0jkpj4m44cqid5jdn7fwg3cl15lsmc0dp3bzp6759spivsx1yzq1"; depends=[Matrix spatstat spatstat_utils]; }; - spatstat_data = derive2 { name="spatstat.data"; version="1.4-0"; sha256="137cf9x6qcp7lw3rpjqizsy73z99yihff8gr434wlz7b5fwmn7hj"; depends=[spatstat_utils]; }; + spatstat_data = derive2 { name="spatstat.data"; version="1.4-3"; sha256="18lfj5vkwxgf5w9qz0g5al3zy8y2yi3bnd13w24hszfc82nbcmc9"; depends=[Matrix spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="3.6-0"; sha256="19kv85smy8jp2bx1mgppav50k07xm8zvmf7snzj29rrspiws7sig"; depends=[spatstat spatstat_utils tensor]; }; spatstat_utils = derive2 { name="spatstat.utils"; version="1.15-0"; sha256="031ar9yycg8kwknn0aa0pn12qjw722payff9jdzz8fb91drpvq4h"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.2"; sha256="0acg6n5qs3z9c7y2n3amla61dm3z1p16njkx0h52dlgdbj5v1nhn"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; @@ -13863,6 +13887,7 @@ in with self; { sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; sphet = derive2 { name="sphet"; version="1.7"; sha256="0savvqz3v5awsr7kcghg6yzkqdpm01kwp7jrg9ajfb3146gg8mlq"; depends=[Matrix nlme sp spdep]; }; spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; + spiR = derive2 { name="spiR"; version="0.1.1"; sha256="10l93f1sw4i2fd67jni32758kmnamxqxsf671k57pbf4jyczwfyy"; depends=[dplyr gsheet reshape2]; }; spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.2"; sha256="1ardf7i0s17k8psch7vv29xnvrhw427id5hx3b8jca5cbz1l2ylb"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; @@ -13880,6 +13905,7 @@ in with self; { splines2 = derive2 { name="splines2"; version="0.2.8"; sha256="0ygzqq0swhcss5v8bn7qg98fpvp3wibbnbzkbpw4nvfd8bg51m1v"; depends=[]; }; splinetree = derive2 { name="splinetree"; version="0.2.0"; sha256="0gqb3kwca42crrx6fj42ryl5pkxvankhp1chdlvi5lgg8mzmqsnl"; depends=[ggplot2 mclust mosaic nlme rpart treeClust]; }; splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; + splitTools = derive2 { name="splitTools"; version="0.1.0"; sha256="0xb9hxqm9s9f2pqfz4rs4agmrmyc77ci2agyzvpm2x05vxy39yxi"; depends=[]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.2"; sha256="0cf9y68m72j890a732m0n784nr12ydljr6s8i80f0in6q8lmw8ls"; depends=[lbfgs]; }; splithalf = derive2 { name="splithalf"; version="0.5.2"; sha256="16ydqj1mjsii18zllm5v24qw8na88sa3ml2s1b0xlc72fvy76646"; depends=[dplyr Rcpp robustbase tidyr]; }; splithalfr = derive2 { name="splithalfr"; version="1.0.10"; sha256="08gl60dbjb4nq6ab0w7yj7ac0gnj0zxbvzlg3rkqczvx4r3gwkip"; depends=[dplyr rlang]; }; @@ -13939,7 +13965,7 @@ in with self; { ssc = derive2 { name="ssc"; version="2.1-0"; sha256="1lq71p8hbjfg4a52009810k5dmhak9ddk1dywvhy7v2gjmxqnadw"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; - ssdtools = derive2 { name="ssdtools"; version="0.1.0"; sha256="1bnr9yk7c9a318pisnq7bnwb4k1ipnyksa08yaqpz8zqc88nbg4p"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle scales VGAM]; }; + ssdtools = derive2 { name="ssdtools"; version="0.1.1"; sha256="1vamc0b325i1jmzkqyjp7hym3x66pj9yflvplqa64m5nxr3q1anz"; depends=[abind actuar chk fitdistrplus ggplot2 lifecycle scales VGAM]; }; sse = derive2 { name="sse"; version="0.7-15"; sha256="1g1hxw1k8wnlzy7qif6334ncp4dxznkf2anhvzcha9iwy56byn1n"; depends=[lattice]; }; ssev = derive2 { name="ssev"; version="0.1.0"; sha256="1iw07gw9vhg073s5kkxh5f1si6p998rc1i2zglnpk5c3pi3l55wp"; depends=[MESS pwr]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; @@ -14012,7 +14038,7 @@ in with self; { statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; stats19 = derive2 { name="stats19"; version="1.1.0"; sha256="163v39dvy0gahw2ra0pvri21k02iv9waqb8pv6j55nicvpvha7jm"; depends=[readr sf]; }; - statsExpressions = derive2 { name="statsExpressions"; version="0.2.0"; sha256="1m6swfxkifbifrh90dkjr948znfz787bmrsn4s9c0kfnxnkl3fli"; depends=[BayesFactor boot broomExtra crayon dplyr ez groupedstats psych purrr rcompanion rlang tibble tidyr WRS2]; }; + statsExpressions = derive2 { name="statsExpressions"; version="0.2.1"; sha256="009hal1944mnpcc4k1p36p66v04dfzxk75ap119mpp1akdf2s14g"; depends=[BayesFactor boot broomExtra crayon dplyr ez groupedstats metaBMA metafor metaplus psych purrr rcompanion rlang tibble tidyr WRS2 zeallot]; }; statsguRu = derive2 { name="statsguRu"; version="0.1.0"; sha256="0pqz0la86mk6zp65zzbfwhxyrqqx040p8mrm2j9wqb53r8fbnmqc"; depends=[devtools htmltab plotrix]; }; statsr = derive2 { name="statsr"; version="0.1-0"; sha256="1z0wfj1jxz02x7vl6sr651v85k88wg8rx0k2kkrwzc4ynim8shms"; depends=[BayesFactor broom cubature dplyr ggplot2 gridExtra knitr rmarkdown shiny tidyr]; }; stcos = derive2 { name="stcos"; version="0.2.1"; sha256="1vjz7x9jign82h5kwqcy4jxqjdnhrsgf00dj5m51f6hvvzh3wv5s"; depends=[dplyr Matrix R6 Rcpp RcppArmadillo sf]; }; @@ -14056,7 +14082,7 @@ in with self; { stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.2"; sha256="08f16a68kmw0r1acs82sha83m04d81b7zdpxjw5g424zbvagwdj4"; depends=[dplyr ggplot2 lubridate maps plyr rlang stringr tidyr weathermetrics]; }; storr = derive2 { name="storr"; version="1.2.1"; sha256="0409gb6wji3cjxkdcd0wc3jvsx61h3rxd8a3nr018y8rh1rpsaj6"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.4.1"; sha256="0kgs3ccyhm2hi8aia7misxwj45c5fy686sqliz7vdk8jayzdsqv1"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate lwgeom magrittr maptools nabor openxlsx raster Rcpp RcppArmadillo readr rgeos rlang sf sp stringr]; }; + stplanr = derive2 { name="stplanr"; version="0.5.0"; sha256="16jyk9n9gvhrqrm6s1m4m3m5jpkdy0wxamfqcbjw91gkjg07caxd"; depends=[curl dplyr geosphere httr igraph jsonlite lwgeom magrittr maptools nabor raster Rcpp RcppArmadillo rgeos rlang sf sp stringr]; }; stpm = derive2 { name="stpm"; version="1.7.7"; sha256="1l40zb9qwshg7saqmgi7c49a3jd93ycrbvmysgzs0q8pl94vgcfs"; depends=[knitcitations MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; @@ -14243,8 +14269,7 @@ in with self; { swissdd = derive2 { name="swissdd"; version="1.0.2"; sha256="13qzkp73djvdd672na1bjj23yldslyg9z840dblsz0qdkp53d4qz"; depends=[curl dplyr jsonlite magrittr purrr tibble tidyr]; }; swissparl = derive2 { name="swissparl"; version="0.2.0"; sha256="1blpaj8mbhnyb4bajh9h91h7pc2zz8gmzdag5faqfqr4rfnk0582"; depends=[crayon dplyr ggplot2 httr jsonlite lubridate magrittr purrr stringr tibble tidyr]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; - switchr = derive2 { name="switchr"; version="0.13.5"; sha256="11y9f8h5qkaykkdk5ya1z8dyw98z5svny56hx0q2b1z2f0iszwc3"; depends=[RCurl RJSONIO]; }; - switchrGist = derive2 { name="switchrGist"; version="0.2.4"; sha256="137kz944qqqrislbm6anknw6n303j441mfhfcrzh33xcb19z320v"; depends=[gistr httpuv RJSONIO switchr]; }; + switchr = derive2 { name="switchr"; version="0.14.2"; sha256="1a1yq12h5km42gp7gki7p215rnbwrs87xa2p0qndwqpvnaxgv6a4"; depends=[RCurl RJSONIO]; }; swmmr = derive2 { name="swmmr"; version="0.9.0"; sha256="1iv9dmgpjfl7yzjlph42bamnwchjdic6n0lgs33z0incvgsv3m3g"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; sybil = derive2 { name="sybil"; version="2.1.5"; sha256="1biy1cc87g7adfglzp2mq6ca5sfp1ljq087id0xqdmrwz0650maq"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.1"; sha256="1zyhvlzkcwnq3sh6gvi0v1crq94mr16bc5jnh0g9c8rbdl4v8r4x"; depends=[sybil]; }; @@ -14269,7 +14294,7 @@ in with self; { synlik = derive2 { name="synlik"; version="0.1.2"; sha256="1pscfqg5x7wpq3vp1i7fy29dwa7cw5g3kzxinanwrwbcznv9nyms"; depends=[Matrix Rcpp RcppArmadillo]; }; synoptReg = derive2 { name="synoptReg"; version="0.2.2"; sha256="0s3m7basw71gliy22c599ysj5s068ki20i8031yrrbdhif8zhbqg"; depends=[ncdf4 raster zoo]; }; syntaxr = derive2 { name="syntaxr"; version="0.8.0"; sha256="1iik9b3x9jx7w31j7hyi3sixg30l5a6w40svhqj1xlchsk60yykn"; depends=[magrittr]; }; - synthACS = derive2 { name="synthACS"; version="1.5.2"; sha256="1y9kvp4fq1602c9876jc8102iidxzqkqsh89ix3m5qf63ldx071f"; depends=[acs data_table Rcpp]; }; + synthACS = derive2 { name="synthACS"; version="1.5.3"; sha256="1fpaqjxyrgmzsxpd2wqpabpzj6fsp88wac0kaf21nc9k5b8lf0gk"; depends=[acs data_table Rcpp]; }; synthpop = derive2 { name="synthpop"; version="1.5-1"; sha256="0cd9g0aa4598l3gyqpywalmkmvibhqkxhkm2qkln11rkwv12lcyv"; depends=[classInt foreign ggplot2 lattice MASS mipfp nnet party plyr polspline proto randomForest rpart]; }; sys = derive2 { name="sys"; version="3.3"; sha256="14wvy46i2iz9jn7lj3cvifmps932s3395wq681hniva0f8m7q8d6"; depends=[]; }; sysfonts = derive2 { name="sysfonts"; version="0.8"; sha256="0wng902plryf2d8fc7k7m3jx11acz51kb2d91cqbyhq7xpk06z43"; depends=[]; }; @@ -14350,7 +14375,7 @@ in with self; { tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; teachingApps = derive2 { name="teachingApps"; version="1.0.4"; sha256="0wi25wdpkz7kh8r1s42wa9kiky8ilmcg8kgw0j1caygwg0bml2fa"; depends=[actuar BH d3heatmap data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI networkD3 pacman plotly radarchart Rcpp RcppEigen RcppNumerical rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; }; tealeaves = derive2 { name="tealeaves"; version="1.0.0"; sha256="0hzih93h8c9gqvsmfaldq9jaw8hgvd4kmrlqlaqr6xhi6zhjqhf1"; depends=[crayon dplyr furrr future ggplot2 glue magrittr purrr rlang stringr tidyr units]; }; - teamcolors = derive2 { name="teamcolors"; version="0.0.3"; sha256="1p2fx30j4wplicd30b8677jdmg78fpp6cbd3nqmx8xbs01gwix9w"; depends=[dplyr ggplot2]; }; + teamcolors = derive2 { name="teamcolors"; version="0.0.4"; sha256="0mqrjnkpxzv7armgbl9nwz42pjb9l94yml5lp41rhjj9414b2729"; depends=[dplyr ggplot2 tibble tidyr]; }; teamr = derive2 { name="teamr"; version="0.0.1"; sha256="01gngws8lf093598wlzrv4ls74avsli6ij33v1plqgc0znyaw4s2"; depends=[httr jsonlite R6]; }; teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; }; @@ -14461,11 +14486,11 @@ in with self; { tidyLPA = derive2 { name="tidyLPA"; version="1.0.4"; sha256="154jikhm1dnriwdib5ncmkjixlihs3b74ilpi225h8ijq84n31ai"; depends=[dplyr ggplot2 mclust mix MplusAutomation tibble]; }; tidyREDCap = derive2 { name="tidyREDCap"; version="0.1.0"; sha256="177jrkd415rl7cz0vyank2bxiqkywcrva8xi8j2hyi6j6hkf0m6a"; depends=[magrittr purrr stringr tibble]; }; tidyRSS = derive2 { name="tidyRSS"; version="1.2.11"; sha256="0ikizs24frvv888zxris6j41lfcvy7hrp5z3h3mk5vxdlqi3rag7"; depends=[dplyr httr jsonlite lubridate magrittr purrr sf stringr testthat tibble xml2]; }; - tidyUSDA = derive2 { name="tidyUSDA"; version="0.2.5"; sha256="035x8aw96as2848j2if9v0d36zpjvybqkbb1wb04hpi92a6bm8fx"; depends=[crayon curl dplyr fuzzyjoin ggplot2 jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis]; }; + tidyUSDA = derive2 { name="tidyUSDA"; version="0.2.6"; sha256="02vrjpg0b651w5mvwhj60isy79q0nid6vyn2bhkddfaffs823lq0"; depends=[crayon curl dplyr fuzzyjoin ggplot2 jsonlite keyring magrittr nlme rgdal sf stringi tigris usethis]; }; tidybayes = derive2 { name="tidybayes"; version="1.1.0"; sha256="1mq6gqr66pqrwdmnk3fmfi508ds086k7jnlazi5mczn4r6pdyzd7"; depends=[arrayhelpers coda dplyr forcats ggplot2 ggstance HDInterval magrittr plyr purrr rlang tibble tidyr tidyselect]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; tidycells = derive2 { name="tidycells"; version="0.2.2"; sha256="1h1g2kw4q0qgakj716gzd8jcn0hgsy5l1cypk35s6arz73xrxf0r"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tibble tidyr unpivotr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.9.5"; sha256="0scp32d50chjvc68qp77psx7jzjdv3v4sq33lli89f2hq200ql4f"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; + tidycensus = derive2 { name="tidycensus"; version="0.9.6"; sha256="16lcldbs1h8y1ajsj7lv04h0gq93hfcd0mbws2wb5pgx0jr187yk"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; tidycode = derive2 { name="tidycode"; version="0.1.1"; sha256="0ahjhn1ar93xnd1snxnivdl43d1b6ica0pc30rgh8jpha87zbsay"; depends=[glue matahari pryr purrr rlang tibble]; }; tidycomm = derive2 { name="tidycomm"; version="0.1.0"; sha256="0xas6nr7fy612r0b5h8ncvirxhzy099zvhdzxbnskm3sa21046ni"; depends=[broom dplyr forcats glue magrittr MBESS purrr rlang stringr tibble tidyr]; }; tidycwl = derive2 { name="tidycwl"; version="1.0.4"; sha256="1f3lrdl73lx0a0y6kz33i6s8nkcwdjdmc6mvnkqp3n8r851q46lg"; depends=[dplyr htmlwidgets jsonlite magrittr visNetwork webshot yaml]; }; @@ -14487,7 +14512,7 @@ in with self; { tidyquant = derive2 { name="tidyquant"; version="0.5.9"; sha256="013yxg3wqvrl7ybda8lxil7cvzzlllb9f2l107867c7af9fbf7vy"; depends=[cli crayon dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod rlang rstudioapi stringr tibble tidyr timetk TTR xml2 xts]; }; tidyquery = derive2 { name="tidyquery"; version="0.2.0"; sha256="1qhiqaijw71lqv2lffsisk53mvxckr7jj6qxvg9l3wygmhskzkvw"; depends=[dplyr lubridate queryparser rlang stringr]; }; tidyqwi = derive2 { name="tidyqwi"; version="0.1.1"; sha256="0qrwclaz6cf2wg3rkg2nqjygflj0a1mx4cfbv5lx4r194km2dmr9"; depends=[dplyr furrr future httr jsonlite labelled magrittr purrr stringr tidyr xml2]; }; - tidyr = derive2 { name="tidyr"; version="1.0.0"; sha256="1403j0xd93l0r7qj738ryd5zc79hbcghrzybib3c3hrnaq5s78cj"; depends=[dplyr ellipsis glue lifecycle magrittr purrr Rcpp rlang stringi tibble tidyselect vctrs]; }; + tidyr = derive2 { name="tidyr"; version="1.0.2"; sha256="0safj8bcf8libwr0jx4059bmarngvhfddrcv8k5iw39m9lpxs0r4"; depends=[dplyr ellipsis glue lifecycle magrittr purrr Rcpp rlang stringi tibble tidyselect vctrs]; }; tidyrules = derive2 { name="tidyrules"; version="0.1.0"; sha256="1pwbgk48rrxcxwjnqfjg4718fw059h4qh3vfni8psgd5snfbsjql"; depends=[assertthat magrittr partykit purrr stringr tibble]; }; tidyselect = derive2 { name="tidyselect"; version="0.2.5"; sha256="0x3cp36byhfjajikr1lwffjm85ayw3bcs7d7kb0cydgs61ifiqjw"; depends=[glue purrr Rcpp rlang]; }; tidystats = derive2 { name="tidystats"; version="0.4"; sha256="1jxn8la5s3mdh9kbkbvlc5icwa7ymingaxrl0q49ykifrsnbpd4a"; depends=[dplyr jsonlite purrr readr stringr tibble tidyr]; }; @@ -14516,7 +14541,7 @@ in with self; { timeR = derive2 { name="timeR"; version="1.1.0"; sha256="0ksdfk0hchphhixllix4wnm1ig46215093i2jvqlcrkqnx5v2zbz"; depends=[lubridate R6]; }; timeROC = derive2 { name="timeROC"; version="0.4"; sha256="1qxijg7hazc8bifwj2254ig2p3cbrp9p0bsyhhh3aikf1rg113v1"; depends=[mvtnorm pec]; }; timeSeq = derive2 { name="timeSeq"; version="1.0.4"; sha256="0m59g12dmnwpmwjmyb9x6z53x3gjmxcaxqva2dlbazsqkbzgaayp"; depends=[gss lattice mgcv pheatmap reshape]; }; - timeSeries = derive2 { name="timeSeries"; version="3042.102"; sha256="185hmd70hida6i12mxbrccapkpwb6jhf6cmcfbz8bc3sv9h3q5gs"; depends=[timeDate]; }; + timeSeries = derive2 { name="timeSeries"; version="3062.100"; sha256="1ybm4jss8y3px172kfx3mhi68k32dmyb1f21kvgcz7992jpx590l"; depends=[timeDate]; }; timechange = derive2 { name="timechange"; version="0.0.1"; sha256="054zh151am6asadj39nz3l4s37kip0bcjwg8mw59s78s5gyjbwds"; depends=[Rcpp]; }; timedelay = derive2 { name="timedelay"; version="1.0.8"; sha256="18f8x3lxhh954vn75gjg27iwyi81x7ajh1xh0bxafs7qivnimxvm"; depends=[MASS]; }; timeline = derive2 { name="timeline"; version="0.9"; sha256="0zkanz3ac6cgsfl80sydgwnjrj9rm7pcfph7wzl3xkh4k0inyjq3"; depends=[ggplot2]; }; @@ -14579,7 +14604,7 @@ in with self; { tmvnsim = derive2 { name="tmvnsim"; version="1.0-2"; sha256="03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp"; depends=[]; }; tmvtnorm = derive2 { name="tmvtnorm"; version="1.4-10"; sha256="1w3kmpx25l7rb80vpclqq4pbbv12qgysyqxjq3lp55l9nklkb7qs"; depends=[gmm Matrix mvtnorm]; }; tnam = derive2 { name="tnam"; version="1.6.5"; sha256="0jbwnsnn6875yprmh6y2i0bvr875hfsg7wfsj6ydmjpr5cpqqk56"; depends=[igraph lme4 network Rcpp sna vegan xergm_common]; }; - tnet = derive2 { name="tnet"; version="3.0.14"; sha256="05cc6jrkjbwxzmgzq30h63xzhlgq8f0l3wx2q54vrv0wpvlvfphn"; depends=[igraph survival]; }; + tnet = derive2 { name="tnet"; version="3.0.14.1"; sha256="1fvczx1lc8a7w4mbg1yzsiayfg5qwyjvg02s4r631vcml6vkznsf"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="1.1-0.0"; sha256="0zg4zk7jx8s57g8nb0jw7r7gss00349jmkglf6sz26p7jldpgmff"; depends=[crayon testthat]; }; todor = derive2 { name="todor"; version="0.0.5"; sha256="1zv6bky5v14csq3pmyy7qzmy680pg3qrj1zghqixsf54aqm7h96q"; depends=[rex rstudioapi stringr]; }; togglr = derive2 { name="togglr"; version="0.1.33"; sha256="105c9vxa67bqccj31ksk5myfd0v7v0wbz6qqjhxqndlg7v6ggfzc"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr parsedate prettyunits purrr rstudioapi]; }; @@ -14649,7 +14674,7 @@ in with self; { treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; treeclim = derive2 { name="treeclim"; version="2.0.3"; sha256="03d734zxz4vjrx7xw9r8y8lcsacn0p92q09n05vqfx4p7wvpwp26"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; - treedater = derive2 { name="treedater"; version="0.3.0"; sha256="0aiqznj8mmxmwmw15m9n1c6wbjawlixwqh8ch735jjbhq737d1s4"; depends=[ape limSolve]; }; + treedater = derive2 { name="treedater"; version="0.5.0"; sha256="007rdrbv3v1z3qbyasla22rck105sqlqh93yfmxklihdydl7smfd"; depends=[ape limSolve]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; treeman = derive2 { name="treeman"; version="1.1.3"; sha256="0xvazizpi3dbdgjd48ff4kg4dhsi2yzbnkk43pgyi21zii673yyn"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; @@ -14899,7 +14924,7 @@ in with self; { valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.5.0"; sha256="14jhrwkiwmha3vlmm7b50n2xxyizj6ddmy89gb20mpzq7qhz1ika"; depends=[broom dplyr ggplot2 Rcpp readr rlang stringr tibble]; }; - valueEQ5D = derive2 { name="valueEQ5D"; version="0.5.0"; sha256="0835p71lipihxks8mzb4wisrjlnlqb794khzw0bh6f6j5s3kaspb"; depends=[rstudioapi testthat]; }; + valueEQ5D = derive2 { name="valueEQ5D"; version="0.5.1"; sha256="0njarifqj7mfnc5bqaq7zpx0z7sx9rmz88755s7426dyypx8v0lv"; depends=[rstudioapi testthat]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; vamc = derive2 { name="vamc"; version="0.1.1"; sha256="0mpn7vp7kc19zbnviah18r972vpw2q5l884xvjkyn23gsib1scvg"; depends=[Rdpack]; }; vampyr = derive2 { name="vampyr"; version="1.0.5"; sha256="0hnxgl2cp3scnazr7fnjgzfz5ihfzs5gwbsb6jlq569d6il9jjl7"; depends=[corpcor EFA_MRFA fungible GPArotation lavaan moments optimbase PCovR psych]; }; @@ -14936,7 +14961,7 @@ in with self; { vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; vcr = derive2 { name="vcr"; version="0.4.0"; sha256="1fy48j5ky271x5a41xrba290nqbzhpqizbl8lg8sxhlr8l30pi62"; depends=[base64enc crul httr lazyeval R6 urltools webmockr yaml]; }; vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; - vctrs = derive2 { name="vctrs"; version="0.2.1"; sha256="0rlwjfvvhv3s5mj4lqhwlqwddpizyp46i1qbcvw0mzb5q8b0nkz0"; depends=[backports digest ellipsis glue rlang zeallot]; }; + vctrs = derive2 { name="vctrs"; version="0.2.2"; sha256="008xjmlj5a5vm303wxac7bliamqwaj7mcj0jv6n9ibc8p8h93aqd"; depends=[digest ellipsis glue rlang]; }; vcvComp = derive2 { name="vcvComp"; version="1.0.1"; sha256="1103hjzd29f8gpsfbagdryq52m6fkhhh9dbqhbmhixxlimc7sd03"; depends=[]; }; vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; vdiffr = derive2 { name="vdiffr"; version="0.3.1"; sha256="1l0vzh7nnwr64cq0nixnr4m0iya4mdpqvh45g2wf1hja51mcvw0a"; depends=[BH devtools diffobj fontquiver freetypeharfbuzz gdtools glue htmltools htmlwidgets purrr R6 Rcpp rlang shiny testthat usethis xml2]; }; @@ -14947,7 +14972,7 @@ in with self; { vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; vegan = derive2 { name="vegan"; version="2.5-6"; sha256="0g60rgn1i7wqf9pf5m1yki1m45gcp7i5hmjic0ci0f6vng70mh5k"; depends=[cluster lattice MASS mgcv permute]; }; vegan3d = derive2 { name="vegan3d"; version="1.1-2"; sha256="01yyhrapdvs6rr5hw1ij4jnpz7mq005s35pn96snpy8ngn6ir386"; depends=[cluster rgl scatterplot3d vegan]; }; - vegawidget = derive2 { name="vegawidget"; version="0.2.1"; sha256="1afmz3bpd863hghvfbv3yicy9hf29fr9ga741yxbkx5jd8grxzzs"; depends=[assertthat glue htmltools htmlwidgets jsonlite magrittr rlang]; }; + vegawidget = derive2 { name="vegawidget"; version="0.3.1"; sha256="154k5n3vg1fdjx6mbrlxvi9h17h651aqwr12wiknwmw0ikhcrnh0"; depends=[assertthat glue htmltools htmlwidgets jsonlite magrittr rlang]; }; vegclust = derive2 { name="vegclust"; version="1.7.7"; sha256="0f81jw429ib601lvbzi4q23kb5n6lvavlgw56wfqdmvvkl68vwlc"; depends=[circular Kendall MASS Rcpp sp vegan]; }; vegdata = derive2 { name="vegdata"; version="0.9.7"; sha256="1cfb993p8sgm08g5859v4q9mil3a64yzhx3hzddvp536pq7jsc86"; depends=[foreign plyr xml2]; }; vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; @@ -14987,7 +15012,6 @@ in with self; { viromeBrowser = derive2 { name="viromeBrowser"; version="1.0.0"; sha256="0adyf6ssi0ph7x880inj1vfmpjfbsaavjavjnrpr9cb6p0qdmvyc"; depends=[Biostrings data_table DT ggplot2 markdown plyr rbokeh reshape Rsamtools shiny shinycssloaders shinydashboard shinyWidgets stringr]; }; virtualPollen = derive2 { name="virtualPollen"; version="1.0.0"; sha256="16q1smwh3ryids3pa7lb4i4pxmjjyl449w6fikkrm9ybj1k8gfcf"; depends=[cowplot ggplot2 mgcv plyr tidyr viridis]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.5.1"; sha256="0l86awcjq6i1lqax596xy5qfmzwiz3cwp2rczvgg37fdrym97cm3"; depends=[ade4 raster rworldmap sp]; }; - virtuoso = derive2 { name="virtuoso"; version="0.1.4"; sha256="1z222xl6h57fgnyk0n3d50j7y6hl9c4lb5g8n94f9krlgnbxi77q"; depends=[curl DBI digest fs ini odbc processx ps rappdirs]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; visNetwork = derive2 { name="visNetwork"; version="2.0.9"; sha256="0854r9znpjd9iy6j5bgrn20vj13dhp606gs3b6iy0rhym71ks2sy"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; visTree = derive2 { name="visTree"; version="0.8.1"; sha256="1l07zfr2hagjpdxfw5290wa3ki4bl7iqxrrhda0d1bp3wmwfz0ai"; depends=[colorspace partykit rpart]; }; @@ -15052,7 +15076,7 @@ in with self; { waiter = derive2 { name="waiter"; version="0.1.0"; sha256="13csg6iy6fzr5fkz3wvmj1fvi0csijbgmvz262jnrq1c75srirmb"; depends=[magrittr R6 shiny]; }; wakefield = derive2 { name="wakefield"; version="0.3.3"; sha256="05z9a6g1cdavalp50wss7klnlcdbv3y1jvz1v8ry1x2bziy216y2"; depends=[chron dplyr ggplot2 stringi]; }; walkalytics = derive2 { name="walkalytics"; version="0.1.0"; sha256="1kl6kwwnl67d45akna01xp389wjxsxlc84l0bcpadbipsqyb3kd1"; depends=[base64enc dplyr httr purrr sp stringr tibble]; }; - walker = derive2 { name="walker"; version="0.3.0"; sha256="0p45mq6xfpzr82y8pbfv04r85prvygm6z01xda4paicmimynd2r4"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; + walker = derive2 { name="walker"; version="0.3.1-1"; sha256="135x32ar8m4m4zxdz94c7wrddsb0ps58nywh2k2gh3kqjbbzxx7a"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; wallace = derive2 { name="wallace"; version="1.0.6"; sha256="0pnkwdfmimnvyygbz1iz1b9fhcdi7k53wjw44kmnr2b7ln9pbcl2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin XML zip]; }; wally = derive2 { name="wally"; version="1.0.10"; sha256="1d03vxn6q7v0nsrkd7dxkkv3siysgicv6c13fkvwmypln9vsl6sl"; depends=[data_table prodlim riskRegression]; }; @@ -15097,7 +15121,7 @@ in with self; { webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; }; webmockr = derive2 { name="webmockr"; version="0.5.0"; sha256="0x4hrhmxqm4291babkkdpv25f36kvz879q3ff2j4n6hk4maqvkki"; depends=[crul curl fauxpas jsonlite magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="1.0"; sha256="1h17g2zaq6ipsb1w6ix9m68ddmp7dspmaqflqkskylh2n8jhk8cd"; depends=[]; }; - webr = derive2 { name="webr"; version="0.1.0"; sha256="0fjbk933034cgmqd41cw7q5xcvrwgylcic6lxav9jv3b2sspzw06"; depends=[ggplot2 moonBook stringr]; }; + webr = derive2 { name="webr"; version="0.1.5"; sha256="03yhlla74i71nphrfhr5sd57ykj7rjanh2a8nw3cq22rg9g668jk"; depends=[dplyr flextable ggforce ggplot2 magrittr moonBook psych purrr rlang rrtable scales shiny sjlabelled stringr tibble tidyr tidyselect vcd ztable]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; websearchr = derive2 { name="websearchr"; version="0.0.3"; sha256="1c6dwm5g5rjq0b12zrwwi5k9760jb0ph83v4j2gm8zm0x9dhiqm9"; depends=[]; }; webshot = derive2 { name="webshot"; version="0.5.2"; sha256="0gq4h8cw51z95yvsnf38kj5l58wgljkm0dalmi8mn1sp06bxr0zi"; depends=[callr jsonlite magrittr]; }; @@ -15136,7 +15160,7 @@ in with self; { widals = derive2 { name="widals"; version="0.6.1"; sha256="1094yaaq2xb0ykvc1j3hs87j1p4h7zgf8mkn4han8iw5fmr9zncy"; depends=[snowfall]; }; widgetframe = derive2 { name="widgetframe"; version="0.3.1"; sha256="0j0d73m72nzfc1wyrgsqr99ldx72adis6pd57mpim55hz0n9l224"; depends=[htmltools htmlwidgets magrittr purrr]; }; widyr = derive2 { name="widyr"; version="0.1.2"; sha256="0mqj9w5sy8m2vqhjxmjrf68bfixbvmkigrsdzfnwvxp18hhfw5mj"; depends=[broom dplyr Matrix purrr reshape2 tidyr tidytext]; }; - wiesbaden = derive2 { name="wiesbaden"; version="1.2.0"; sha256="09nf25s134livlcgfl0aq5njg50kcw82nmiin6jqzwpjkd35x6vp"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; + wiesbaden = derive2 { name="wiesbaden"; version="1.2.1"; sha256="0ilqqv4xp4ngjq3snhzwdc8qzp3zr31kq2r4lqiv2arj5ggb1350"; depends=[httr jsonlite keyring readr stringi stringr xml2]; }; wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikifacts = derive2 { name="wikifacts"; version="0.1.0"; sha256="01mwzqign59lh7wvf8q8kwkgnfxi9nkk6n0qwfh27q64fajw8clg"; depends=[magrittr rvest xml2]; }; wikilake = derive2 { name="wikilake"; version="0.4"; sha256="0pm0brzkf2k6aknwl4b3fba5ly7mhah8qfb0h94fckiaqbnpyx9v"; depends=[maps rvest selectr sp stringi stringr units WikipediR xml2]; }; @@ -15194,7 +15218,7 @@ in with self; { wrMisc = derive2 { name="wrMisc"; version="1.1.0"; sha256="10cg4l963aabynic25m6k3sp69d6amhkpqv5x5m38nidy4855jzb"; depends=[MASS]; }; wrProteo = derive2 { name="wrProteo"; version="1.0.0"; sha256="110rpwac6hccv8i55fdw3mzd500jip1ldzmqw4196igq61cd9m20"; depends=[limma wrMisc]; }; wrangle = derive2 { name="wrangle"; version="0.5.2"; sha256="1b6qgwdjvwbrarp9ylgkb5ia1p5a5g7ws0jyqrwc6hii8z5yj2qb"; depends=[dplyr lazyeval magrittr rlang tidyr]; }; - wrapr = derive2 { name="wrapr"; version="1.9.5"; sha256="0sjahmmvcxrpn2ajffzxb4q05ibzjwpiqsrijs8wvanb55zlpf4r"; depends=[]; }; + wrapr = derive2 { name="wrapr"; version="1.9.6"; sha256="0kpwjasnsskk6l2najydcxqwa0ms2mf7v0y286hv8gipqfq48z03"; depends=[]; }; wrassp = derive2 { name="wrassp"; version="0.1.8"; sha256="052x0lxpchr6f97yfj3vmhh8gc8qg5pp1m91h5akrav4yfawbs7k"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="1.2"; sha256="09fhdip6igcg97fjx4c7727cx2lb49l4d74l4i8rg2bag2s5lrj3"; depends=[]; }; @@ -15277,9 +15301,9 @@ in with self; { yager = derive2 { name="yager"; version="0.1.0"; sha256="01gxpaf4wvii056xn84m9gkq46m7hxqgg5f2frakhgnlpm3afgfb"; depends=[lhs MLmetrics randtoolbox]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; yaml = derive2 { name="yaml"; version="2.2.0"; sha256="0in562nd0i23cg91a8kdbqgim656fgscykwi0icsnq53xj3srg2m"; depends=[]; }; - yamlet = derive2 { name="yamlet"; version="0.3.1"; sha256="0mrdvvbjpi65jdpzfm37h6v55dqsvmk7l5zxvkwazlcjp2w8wyg0"; depends=[csv encode ggplot2 knitr yaml]; }; + yamlet = derive2 { name="yamlet"; version="0.3.3"; sha256="181kz8xnkgm7k9ff6iw7jydfl69717b19bwwwxpyy8p9pxzmr94q"; depends=[csv dplyr encode ggplot2 knitr rlang yaml]; }; yap = derive2 { name="yap"; version="0.1.0"; sha256="12cagxisky7aq04ab9ycd4mp7xfs7z0v3rc2sczcngn2pc8pdjm7"; depends=[lhs randtoolbox]; }; - yardstick = derive2 { name="yardstick"; version="0.0.4"; sha256="03pq8wmb6467mkp7ax1gpydg5c6q82r1byhdzjl92g7986p7h3mv"; depends=[dplyr generics pROC Rcpp rlang tidyselect]; }; + yardstick = derive2 { name="yardstick"; version="0.0.5"; sha256="0gmfq1jx8lp6b24clxyj5r1976q3znlchbqa6jk87lyd5fn43f7b"; depends=[dplyr generics pROC Rcpp rlang tidyselect]; }; yarr = derive2 { name="yarr"; version="0.1.2"; sha256="16q109jrydckz7s1rkmr2sh8q92cgr1c534fvpbh3h0bc3fvvf8g"; depends=[]; }; yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; }; yasp = derive2 { name="yasp"; version="0.2.0"; sha256="0fza8h9y1wmarsmjcvw4r970d6j4ii795pd2h4xh9nlsirv50adi"; depends=[]; }; diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index df44139024a..2c927c7408c 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -363,7 +363,7 @@ let topicmodels = [ pkgs.gsl_1 ]; udunits2 = [ pkgs.udunits pkgs.expat ]; units = [ pkgs.udunits ]; - V8 = [ pkgs.v8_3_14 ]; + V8 = [ pkgs.v8 ]; WhopGenome = [ pkgs.zlib.dev ]; XBRL = [ pkgs.zlib pkgs.libxml2.dev ]; xml2 = [ pkgs.libxml2.dev ] ++ lib.optionals stdenv.isDarwin [ pkgs.perl ]; @@ -849,11 +849,16 @@ let }); V8 = old.V8.overrideDerivation (attrs: { + postPatch = '' + substituteInPlace configure \ + --replace " -lv8_libplatform" "" + ''; + preConfigure = '' - export INCLUDE_DIR=${pkgs.v8_3_14}/include - export LIB_DIR=${pkgs.v8_3_14}/lib + export INCLUDE_DIR=${pkgs.v8}/include + export LIB_DIR=${pkgs.v8}/lib patchShebangs configure - ''; + ''; }); acs = old.acs.overrideDerivation (attrs: { diff --git a/pkgs/development/tools/build-managers/rebar3/default.nix b/pkgs/development/tools/build-managers/rebar3/default.nix index 4ebeb7f0528..792daba791b 100644 --- a/pkgs/development/tools/build-managers/rebar3/default.nix +++ b/pkgs/development/tools/build-managers/rebar3/default.nix @@ -78,6 +78,8 @@ stdenv.mkDerivation rec { sha256 = "0936ix7lfwsamssap58b265zid7x2m97azrr2qpjcln3xysd16lg"; }; + bootstrapper = ./rebar3-nix-bootstrap; + buildInputs = [ erlang tree ]; postPatch = '' diff --git a/pkgs/development/tools/misc/argbash/default.nix b/pkgs/development/tools/misc/argbash/default.nix index b8e3ff4a9df..0cc25ddf20b 100644 --- a/pkgs/development/tools/misc/argbash/default.nix +++ b/pkgs/development/tools/misc/argbash/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, autoconf }: +{ stdenv, fetchFromGitHub, autoconf, runtimeShell, python3Packages, makeWrapper }: stdenv.mkDerivation rec { pname = "argbash"; @@ -12,12 +12,24 @@ stdenv.mkDerivation rec { sha256 = "0zara7v3pnwiwkpb0x0g37pxhmim4425q4gba712f6djj115r1mr"; }; - sourceRoot = "${src}/resources"; + sourceRoot = "source/resources"; - nativeBuildInputs = [ autoconf ]; + postPatch = '' + chmod -R +w .. + patchShebangs .. + substituteInPlace Makefile \ + --replace '/bin/bash' "${runtimeShell}" + ''; + + nativeBuildInputs = [ autoconf python3Packages.docutils makeWrapper ]; makeFlags = [ "PREFIX=$(out)" ]; + postInstall = '' + wrapProgram $out/bin/argbash \ + --prefix PATH : '${autoconf}/bin' + ''; + meta = with stdenv.lib; { description = "Bash argument parsing code generator"; homepage = "https://argbash.io/"; diff --git a/pkgs/development/tools/misc/avarice/default.nix b/pkgs/development/tools/misc/avarice/default.nix deleted file mode 100644 index a8f6426a3b7..00000000000 --- a/pkgs/development/tools/misc/avarice/default.nix +++ /dev/null @@ -1,24 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, gcc, perl, libusb }: - -stdenv.mkDerivation rec { - - name="avarice-2.13"; - - src = fetchurl { - url = "mirror://sourceforge/avarice/${name}.tar.bz2"; - sha256 = "0jhh1h1k5b41v2ycq8kn43nkrkh0b9l7xjmw38rak871g3z3hix1"; - }; - - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ gcc perl libusb ]; - - meta = { - license = stdenv.lib.licenses.gpl2; - description = "Translator between GDB's remote debug protocol and the AVR JTAG ICE protocol"; - homepage = https://sourceforge.net/projects/avarice/files/avarice/; - maintainers = [ stdenv.lib.maintainers.smironov ]; - platforms = stdenv.lib.platforms.linux; - broken = true; # 2018-04-10 - }; -} - diff --git a/pkgs/development/tools/pretty-simple/default.nix b/pkgs/development/tools/pretty-simple/default.nix new file mode 100644 index 00000000000..c55e176176d --- /dev/null +++ b/pkgs/development/tools/pretty-simple/default.nix @@ -0,0 +1,12 @@ +{ haskell, haskellPackages, lib }: + +haskell.lib.justStaticExecutables (haskell.lib.overrideCabal haskellPackages.pretty-simple (oldAttrs: { + maintainers = (oldAttrs.maintainers or []) ++ [ + lib.maintainers.cdepillabout + ]; + + configureFlags = (oldAttrs.configureFlags or []) ++ ["-fbuildexe"]; + + buildDepends = (oldAttrs.buildDepends or []) ++ [haskellPackages.optparse-applicative]; +})) + diff --git a/pkgs/games/mindustry/default.nix b/pkgs/games/mindustry/default.nix index 6e6d6b56014..3d4f52f2c70 100644 --- a/pkgs/games/mindustry/default.nix +++ b/pkgs/games/mindustry/default.nix @@ -12,6 +12,8 @@ # any build is allowed, so this parameter acts as a simple whitelist. # Takes the package version and returns the build version. , makeBuildVersion ? (v: v) +, enableClient ? true +, enableServer ? true }: let @@ -52,6 +54,9 @@ let pname = "${pname}-deps"; inherit version src postPatch; nativeBuildInputs = [ gradle_5 perl ]; + # Here we build both the server and the client so we only have to specify + # one hash for 'deps'. Deps can be garbage collected after the build, + # so this is not really an issue. buildPhase = '' export GRADLE_USER_HOME=$(mktemp -d) gradle --no-daemon desktop:dist -Pbuildversion=${buildVersion} @@ -68,31 +73,49 @@ let outputHash = "16k058fw9yk89adx8j1708ynfri5yizmmvh49prls9slw4hipffb"; }; -in stdenv.mkDerivation rec { - inherit pname version src postPatch; - - nativeBuildInputs = [ gradle_5 makeWrapper ]; - - buildPhase = '' - export GRADLE_USER_HOME=$(mktemp -d) - # point to offline repo - sed -ie "s#mavenLocal()#mavenLocal(); maven { url '${deps}' }#g" build.gradle + # Separate commands for building and installing the server and the client + buildClient = '' gradle --offline --no-daemon desktop:dist -Pbuildversion=${buildVersion} + ''; + buildServer = '' gradle --offline --no-daemon server:dist -Pbuildversion=${buildVersion} ''; - - installPhase = '' + installClient = '' install -Dm644 desktop/build/libs/Mindustry.jar $out/share/mindustry.jar - install -Dm644 server/build/libs/server-release.jar $out/share/mindustry-server.jar - mkdir $out/bin + mkdir -p $out/bin makeWrapper ${jre}/bin/java $out/bin/mindustry \ --prefix LD_LIBRARY_PATH : ${libpulseaudio}/lib \ --add-flags "-jar $out/share/mindustry.jar" - makeWrapper ${jre}/bin/java $out/bin/mindustry-server \ - --add-flags "-jar $out/share/mindustry-server.jar" install -Dm644 core/assets/icons/icon_64.png $out/share/icons/hicolor/64x64/apps/mindustry.png install -Dm644 ${desktopItem}/share/applications/Mindustry.desktop $out/share/applications/Mindustry.desktop ''; + installServer = '' + install -Dm644 server/build/libs/server-release.jar $out/share/mindustry-server.jar + mkdir -p $out/bin + makeWrapper ${jre}/bin/java $out/bin/mindustry-server \ + --add-flags "-jar $out/share/mindustry-server.jar" + ''; + +in +assert stdenv.lib.assertMsg (enableClient || enableServer) + "mindustry: at least one of 'enableClient' and 'enableServer' must be true"; +stdenv.mkDerivation rec { + inherit pname version src postPatch; + + nativeBuildInputs = [ gradle_5 makeWrapper ]; + + buildPhase = with stdenv.lib; '' + export GRADLE_USER_HOME=$(mktemp -d) + # point to offline repo + sed -ie "s#mavenLocal()#mavenLocal(); maven { url '${deps}' }#g" build.gradle + ${optionalString enableClient buildClient} + ${optionalString enableServer buildServer} + ''; + + installPhase = with stdenv.lib; '' + ${optionalString enableClient installClient} + ${optionalString enableServer installServer} + ''; meta = with stdenv.lib; { homepage = "https://mindustrygame.github.io/"; diff --git a/pkgs/games/scummvm/default.nix b/pkgs/games/scummvm/default.nix index 8ef6e0c8be5..80fa840cc69 100644 --- a/pkgs/games/scummvm/default.nix +++ b/pkgs/games/scummvm/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { pname = "scummvm"; - version = "2.1.0"; + version = "2.1.1"; src = fetchurl { url = "http://scummvm.org/frs/scummvm/${version}/${pname}-${version}.tar.xz"; - sha256 = "6b50c6596a1536b52865f556dc05ded20f86b6ffabe4bccbd746b5587b15f727"; + sha256 = "1a6waf1ybp91nwva8g650cljlfb1di4l0jv13vg6yfgkas9pclsp"; }; nativeBuildInputs = [ nasm ]; diff --git a/pkgs/misc/emulators/attract-mode/default.nix b/pkgs/misc/emulators/attract-mode/default.nix index 7e6694b28d9..6c47109fb65 100644 --- a/pkgs/misc/emulators/attract-mode/default.nix +++ b/pkgs/misc/emulators/attract-mode/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "attract-mode"; - version = "2.2.0"; + version = "2.6.1"; src = fetchFromGitHub { owner = "mickelson"; repo = "attract"; rev = "v${version}"; - sha256 = "1arkfj0q3n1qbq5jwmal0kixxph8lnmv3g9bli36inab4r8zzmp8"; + sha256 = "16p369j0hanm0l2fiy6h9d9pn0f3qblcy9l39all6h7rfxnhp9ii"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/misc/emulators/wine/sources.nix b/pkgs/misc/emulators/wine/sources.nix index 21d00b30dcb..06b3a950ba0 100644 --- a/pkgs/misc/emulators/wine/sources.nix +++ b/pkgs/misc/emulators/wine/sources.nix @@ -13,9 +13,9 @@ let fetchurl = args@{url, sha256, ...}: in rec { stable = fetchurl rec { - version = "4.0.3"; - url = "https://dl.winehq.org/wine/source/4.0/wine-${version}.tar.xz"; - sha256 = "1nhgw1wm613ln9dhjm0d03zs5adcmnqr2b50p21jbmm5k2gns0i5"; + version = "5.0"; + url = "https://dl.winehq.org/wine/source/5.0/wine-${version}.tar.xz"; + sha256 = "1d0kcy338radq07hrnzcpc9lc9j2fvzjh37q673002x8d6x5058q"; ## see http://wiki.winehq.org/Gecko gecko32 = fetchurl rec { @@ -39,16 +39,16 @@ in rec { unstable = fetchurl rec { # NOTE: Don't forget to change the SHA256 for staging as well. - version = "5.0-rc6"; + version = "5.0"; url = "https://dl.winehq.org/wine/source/5.0/wine-${version}.tar.xz"; - sha256 = "1d1kv7ppqq5irx3wv2lw810ylg8wk1nddc1kwb936v5qrkkgifwc"; + sha256 = "1d0kcy338radq07hrnzcpc9lc9j2fvzjh37q673002x8d6x5058q"; inherit (stable) mono gecko32 gecko64; }; staging = fetchFromGitHub rec { # https://github.com/wine-staging/wine-staging/releases inherit (unstable) version; - sha256 = "193z92gpw7f421a4sa46qmp90pnbgglrlgyzfs5zpap32zmwhrqz"; + sha256 = "054m2glvav29qnlgr3p36kahyv3kbxzba82djzqpc7cmsrin0d3f"; owner = "wine-staging"; repo = "wine-staging"; rev = "v${version}"; diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix index eb5cf21e79d..d4823066d8d 100644 --- a/pkgs/misc/vim-plugins/generated.nix +++ b/pkgs/misc/vim-plugins/generated.nix @@ -4887,6 +4887,17 @@ let }; }; + vim-prosession = buildVimPluginFrom2Nix { + pname = "vim-prosession"; + version = "2019-11-01"; + src = fetchFromGitHub { + owner = "dhruvasagar"; + repo = "vim-prosession"; + rev = "84df77d6470491a67f926b9a6a6a8cc675c161ac"; + sha256 = "03p5ncdah3mxd2dxrqprd14gzyy2qlvf9y5hcsdcakf2hhsrxvlg"; + }; + }; + vim-protobuf = buildVimPluginFrom2Nix { pname = "vim-protobuf"; version = "2017-12-26"; diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names index a069638cadf..9ce6f478672 100644 --- a/pkgs/misc/vim-plugins/vim-plugin-names +++ b/pkgs/misc/vim-plugins/vim-plugin-names @@ -68,6 +68,7 @@ deoplete-plugins/deoplete-jedi deoplete-plugins/deoplete-zsh derekelkins/agda-vim derekwyatt/vim-scala +dhruvasagar/vim-prosession dhruvasagar/vim-table-mode digitaltoad/vim-jade direnv/direnv.vim diff --git a/pkgs/os-specific/linux/bpftool/default.nix b/pkgs/os-specific/linux/bpftool/default.nix index 8b288fc046a..34ddcc3a213 100644 --- a/pkgs/os-specific/linux/bpftool/default.nix +++ b/pkgs/os-specific/linux/bpftool/default.nix @@ -1,15 +1,19 @@ { stdenv , libopcodes, libbfd, libelf , linuxPackages_latest, zlib +, python3 }: stdenv.mkDerivation { pname = "bpftool"; inherit (linuxPackages_latest.kernel) version src; + nativeBuildInputs = [ python3 ]; buildInputs = [ libopcodes libbfd libelf zlib ]; preConfigure = '' + patchShebangs scripts/bpf_helpers_doc.py + cd tools/bpf/bpftool substituteInPlace ./Makefile \ --replace '/usr/local' "$out" \ diff --git a/pkgs/os-specific/linux/kernel/linux-5.5.nix b/pkgs/os-specific/linux/kernel/linux-5.5.nix new file mode 100644 index 00000000000..7347cf1fa66 --- /dev/null +++ b/pkgs/os-specific/linux/kernel/linux-5.5.nix @@ -0,0 +1,18 @@ +{ stdenv, buildPackages, fetchurl, perl, buildLinux, modDirVersionArg ? null, ... } @ args: + +with stdenv.lib; + +buildLinux (args // rec { + version = "5.5"; + + # modDirVersion needs to be x.y.z, will automatically add .0 if needed + modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg; + + # branchVersion needs to be x.y + extraMeta.branch = versions.majorMinor version; + + src = fetchurl { + url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz"; + sha256 = "0c131fi6s7vgvka1c0597vnvcmwn1pp968rci5kq64iwj3pd9yx6"; + }; +} // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/perf.nix b/pkgs/os-specific/linux/kernel/perf.nix index 9f32e3e37dd..07dd8c78f42 100644 --- a/pkgs/os-specific/linux/kernel/perf.nix +++ b/pkgs/os-specific/linux/kernel/perf.nix @@ -36,7 +36,7 @@ stdenv.mkDerivation { # perf refers both to newt and slang nativeBuildInputs = [ asciidoc xmlto docbook_xsl docbook_xml_dtd_45 libxslt - flex bison libiberty audit makeWrapper pkgconfig + flex bison libiberty audit makeWrapper pkgconfig python3 ]; buildInputs = [ elfutils newt slang libunwind libbfd zlib openssl systemtap.stapBuild numactl @@ -54,6 +54,10 @@ stdenv.mkDerivation { "-Wno-error=stringop-truncation" ]; + postPatch = '' + patchShebangs scripts/bpf_helpers_doc.py + ''; + doCheck = false; # requires "sparse" doInstallCheck = false; # same diff --git a/pkgs/os-specific/linux/wireguard/default.nix b/pkgs/os-specific/linux/wireguard/default.nix index e1de74a1855..247fd8ed250 100644 --- a/pkgs/os-specific/linux/wireguard/default.nix +++ b/pkgs/os-specific/linux/wireguard/default.nix @@ -7,11 +7,11 @@ assert stdenv.lib.versionOlder kernel.version "5.6"; stdenv.mkDerivation rec { pname = "wireguard"; - version = "0.0.20200121"; + version = "0.0.20200128"; src = fetchzip { url = "https://git.zx2c4.com/wireguard-linux-compat/snapshot/wireguard-linux-compat-${version}.tar.xz"; - sha256 = "0h8jq8ki998jw4fynb7if4hcgnl0w6lbd5zwiy0xljj3mfqxdxvv"; + sha256 = "05iz0pl0znx5yham8qzpym2ggc9babh36xaa504k99qqvddg8b11"; }; preConfigure = '' diff --git a/pkgs/os-specific/linux/zenmonitor/default.nix b/pkgs/os-specific/linux/zenmonitor/default.nix new file mode 100644 index 00000000000..c333b94f40e --- /dev/null +++ b/pkgs/os-specific/linux/zenmonitor/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchFromGitHub, pkgconfig, gtk3, wrapGAppsHook }: + +stdenv.mkDerivation rec { + pname = "zenmonitor"; + version = "1.3"; + + src = fetchFromGitHub { + owner = "ocerman"; + repo = "zenmonitor"; + rev = "v${version}"; + sha256 = "16p2njrgik8zfkidm64v4qy53qlsqqxxgr9m3n84pr9l3pk25dwk"; + }; + + buildInputs = [ gtk3 ]; + nativeBuildInputs = [ pkgconfig wrapGAppsHook ]; + + makeFlags = [ "PREFIX=${placeholder "out"}" ]; + + meta = with stdenv.lib; { + description = "Monitoring software for AMD Zen-based CPUs"; + homepage = https://github.com/ocerman/zenmonitor; + license = licenses.mit; + platforms = [ "i686-linux" "x86_64-linux" ]; + maintainers = with maintainers; [ alexbakker ]; + }; +} diff --git a/pkgs/servers/firebird/default.nix b/pkgs/servers/firebird/default.nix index 40780c9a97b..d80508bfe44 100644 --- a/pkgs/servers/firebird/default.nix +++ b/pkgs/servers/firebird/default.nix @@ -85,6 +85,7 @@ stdenv.mkDerivation rec { license = ["IDPL" "Interbase-1.0"]; maintainers = [stdenv.lib.maintainers.marcweber]; platforms = stdenv.lib.platforms.linux; + broken = true; }; } diff --git a/pkgs/servers/foundationdb/default.nix b/pkgs/servers/foundationdb/default.nix index ea762ed656d..98247e35e19 100644 --- a/pkgs/servers/foundationdb/default.nix +++ b/pkgs/servers/foundationdb/default.nix @@ -1,4 +1,4 @@ -{ stdenv, stdenv49, gccStdenv, llvmPackages +{ gcc6Stdenv, stdenv, gccStdenv, llvmPackages , lib, fetchurl, fetchpatch, fetchFromGitHub , cmake, ninja, which, findutils, m4, gawk @@ -37,6 +37,7 @@ in with builtins; { patches = [ ./patches/ldflags-5.1.patch ./patches/fix-scm-version.patch + ./patches/gcc-fixes.patch python3-six-patch python3-print-patch ]; @@ -50,6 +51,7 @@ in with builtins; { patches = [ ./patches/ldflags-5.2.patch ./patches/fix-scm-version.patch + ./patches/gcc-fixes.patch python3-six-patch python3-print-patch ]; diff --git a/pkgs/servers/foundationdb/patches/gcc-fixes.patch b/pkgs/servers/foundationdb/patches/gcc-fixes.patch new file mode 100644 index 00000000000..295e405b9fc --- /dev/null +++ b/pkgs/servers/foundationdb/patches/gcc-fixes.patch @@ -0,0 +1,117 @@ +diff --git a/fdbrpc/ContinuousSample.h b/fdbrpc/ContinuousSample.h +index 54ff1b1..577c228 100644 +--- a/fdbrpc/ContinuousSample.h ++++ b/fdbrpc/ContinuousSample.h +@@ -26,6 +26,7 @@ + #include "flow/IRandom.h" + #include <vector> + #include <algorithm> ++#include <cmath> + + template <class T> + class ContinuousSample { +diff --git a/fdbrpc/Smoother.h b/fdbrpc/Smoother.h +index 3ed8e6e..fb46947 100644 +--- a/fdbrpc/Smoother.h ++++ b/fdbrpc/Smoother.h +@@ -23,6 +23,7 @@ + #pragma once + + #include "flow/flow.h" ++#include <cmath> + + struct Smoother { + // Times (t) are expected to be nondecreasing +@@ -90,4 +91,4 @@ struct TimerSmoother { + double time, total, estimate; + }; + +-#endif +\ No newline at end of file ++#endif +diff --git a/fdbrpc/libcoroutine/Coro.c b/fdbrpc/libcoroutine/Coro.c +index cbfdc8f..9993cee 100644 +--- a/fdbrpc/libcoroutine/Coro.c ++++ b/fdbrpc/libcoroutine/Coro.c +@@ -66,6 +66,8 @@ VALGRIND_STACK_DEREGISTER((coro)->valgrindStackId) + #define STACK_DEREGISTER(coro) + #endif + ++#pragma GCC diagnostic ignored "-Wreturn-local-addr" ++ + // Define outside + extern intptr_t g_stackYieldLimit; + +diff --git a/fdbserver/Knobs.cpp b/fdbserver/Knobs.cpp +index 819c513..acfbfe7 100644 +--- a/fdbserver/Knobs.cpp ++++ b/fdbserver/Knobs.cpp +@@ -20,6 +20,7 @@ + + #include "Knobs.h" + #include "fdbrpc/Locality.h" ++#include <cmath> + + ServerKnobs const* SERVER_KNOBS = new ServerKnobs(); + +diff --git a/flow/Knobs.cpp b/flow/Knobs.cpp +index b485a84..82541d4 100644 +--- a/flow/Knobs.cpp ++++ b/flow/Knobs.cpp +@@ -20,6 +20,7 @@ + + #include "Knobs.h" + #include "flow/flow.h" ++#include <cmath> + + FlowKnobs const* FLOW_KNOBS = new FlowKnobs(); + +diff --git a/flow/Platform.cpp b/flow/Platform.cpp +index 69dac88..69b86d4 100644 +--- a/flow/Platform.cpp ++++ b/flow/Platform.cpp +@@ -623,7 +623,7 @@ void getDiskStatistics(std::string const& directory, uint64_t& currentIOs, uint6 + unsigned int minorId; + disk_stream >> majorId; + disk_stream >> minorId; +- if(majorId == (unsigned int) major(buf.st_dev) && minorId == (unsigned int) minor(buf.st_dev)) { ++ if(majorId == (unsigned int) gnu_dev_major(buf.st_dev) && minorId == (unsigned int) gnu_dev_minor(buf.st_dev)) { + std::string ignore; + uint64_t rd_ios; /* # of reads completed */ + // This is the total number of reads completed successfully. +diff --git a/flow/TDMetric.actor.h b/flow/TDMetric.actor.h +index 5421b83..711a960 100755 +--- a/flow/TDMetric.actor.h ++++ b/flow/TDMetric.actor.h +@@ -36,6 +36,7 @@ + #include "CompressedInt.h" + #include <algorithm> + #include <functional> ++#include <cmath> + + struct MetricNameRef { + MetricNameRef() {} +diff --git a/flow/flow.h b/flow/flow.h +index 0c220af..f685fbc 100644 +--- a/flow/flow.h ++++ b/flow/flow.h +@@ -248,19 +248,6 @@ public: + } + } + +- bool operator == (ErrorOr const& o) const { +- return error == o.error && (!present() || get() == o.get()); +- } +- bool operator != (ErrorOr const& o) const { +- return !(*this == o); +- } +- +- bool operator < (ErrorOr const& o) const { +- if (error != o.error) return error < o.error; +- if (!present()) return false; +- return get() < o.get(); +- } +- + bool isError() const { return error.code() != invalid_error_code; } + bool isError(int code) const { return error.code() == code; } + Error getError() const { ASSERT(isError()); return error; } diff --git a/pkgs/servers/foundationdb/vsmake.nix b/pkgs/servers/foundationdb/vsmake.nix index 0265e18861e..a7eedb8408b 100644 --- a/pkgs/servers/foundationdb/vsmake.nix +++ b/pkgs/servers/foundationdb/vsmake.nix @@ -1,7 +1,7 @@ # This builder is for FoundationDB's original, somewhat strange visual studio + # make build system. In FoundationDB 6.1 and later, there's a new CMake system # (which will eventually become the default version.) -{ stdenv49, lib, fetchurl, fetchFromGitHub +{ gcc6Stdenv, lib, fetchurl, fetchFromGitHub , which, findutils, m4, gawk , python, openjdk, mono, libressl @@ -12,7 +12,7 @@ let # hysterical raisins dictate a version of boost this old. however, # we luckily do not need to build anything, we just need the header # files. - boost152 = stdenv49.mkDerivation { + boost152 = gcc6Stdenv.mkDerivation { name = "boost-headers-1.52.0"; src = fetchurl { @@ -33,10 +33,6 @@ let # the revision can be inferred from the fdb tagging policy , rev ? "refs/tags/${version}" - # in theory newer versions of fdb support newer compilers, but they - # don't :( maybe one day - , stdenv ? stdenv49 - # in theory newer versions of fdb support newer boost versions, but they # don't :( maybe one day , boost ? boost152 @@ -45,7 +41,7 @@ let , officialRelease ? true , patches ? [] - }: stdenv.mkDerivation { + }: gcc6Stdenv.mkDerivation { pname = "foundationdb"; inherit version; @@ -143,7 +139,7 @@ let outputs = [ "out" "lib" "dev" "pythonsrc" ]; - meta = with stdenv.lib; { + meta = with gcc6Stdenv.lib; { description = "Open source, distributed, transactional key-value store"; homepage = https://www.foundationdb.org; license = licenses.asl20; diff --git a/pkgs/servers/gobetween/default.nix b/pkgs/servers/gobetween/default.nix new file mode 100644 index 00000000000..ff59ad53ed1 --- /dev/null +++ b/pkgs/servers/gobetween/default.nix @@ -0,0 +1,34 @@ +{ buildGoModule, fetchFromGitHub, lib, enableStatic ? false }: + +buildGoModule rec { + pname = "gobetween"; + version = "0.7.0"; + + src = fetchFromGitHub { + owner = "yyyar"; + repo = "gobetween"; + rev = version; + sha256 = "f01593509ccece063acd47002c4fc52261fbbbcdbf14b088d813b7d8e38fcca8"; + }; + + modSha256 = + "dd91838d20c99c73447590e43edd13c87755276f17ef3e53f24c5df3d0908f78"; + + buildPhase = '' + make build${lib.optionalString enableStatic "-static"} + ''; + + installPhase = '' + mkdir -p $out/bin + cp bin/gobetween $out/bin + cp -r share $out/share + cp -r config $out/share + ''; + + meta = with lib; { + description = "Modern & minimalistic load balancer for the Сloud era"; + homepage = "http://gobetween.io"; + license = licenses.mit; + maintainers = with maintainers; [ tomberek ]; + }; +} diff --git a/pkgs/servers/mail/opensmtpd/default.nix b/pkgs/servers/mail/opensmtpd/default.nix index 5a768178ee7..48e2666c580 100644 --- a/pkgs/servers/mail/opensmtpd/default.nix +++ b/pkgs/servers/mail/opensmtpd/default.nix @@ -4,14 +4,14 @@ stdenv.mkDerivation rec { pname = "opensmtpd"; - version = "6.6.1p1"; + version = "6.6.2p1"; nativeBuildInputs = [ autoconf automake libtool bison ]; buildInputs = [ libasr libevent zlib libressl db pam ]; src = fetchurl { url = "https://www.opensmtpd.org/archives/${pname}-${version}.tar.gz"; - sha256 = "1ngil8j13m2rq07g94j4yjr6zmaimzy8wbfr17shi7rxnazys6zb"; + sha256 = "16nz2n4s3djlasd6m6dqfwggf6igyfxzq5igny5i0qb8lnn13f33"; }; patches = [ diff --git a/pkgs/servers/mail/spamassassin/default.nix b/pkgs/servers/mail/spamassassin/default.nix index 274f45d5b2d..6980dca9403 100644 --- a/pkgs/servers/mail/spamassassin/default.nix +++ b/pkgs/servers/mail/spamassassin/default.nix @@ -9,9 +9,6 @@ perlPackages.buildPerlPackage rec { sha256 = "1380cmrgjsyidnznr844c5yr9snz36dw7xchdfryi2s61vjzvf55"; }; - # https://bz.apache.org/SpamAssassin/show_bug.cgi?id=7434 - patches = [ ./sa-update_add--siteconfigpath.patch ]; - buildInputs = [ makeWrapper ] ++ (with perlPackages; [ HTMLParser NetCIDRLite NetDNS NetAddrIP DBFile HTTPDate MailDKIM LWP IOSocketSSL DBI EncodeDetect IPCountry NetIdent Razor2ClientAgent MailSPF @@ -22,7 +19,7 @@ perlPackages.buildPerlPackage rec { # for the PERL5LIB environment variable. Needs further investigation. makeFlags = [ "PERL_BIN=${perlPackages.perl}/bin/perl" "PERL_TAINT=no" ]; - makeMakerFlags = [ "CONFDIR=/homeless/shelter" "LOCALSTATEDIR=/var/lib/spamassassin" ]; + makeMakerFlags = [ "SYSCONFDIR=/etc LOCALSTATEDIR=/var/lib/spamassassin" ]; doCheck = false; diff --git a/pkgs/servers/mail/spamassassin/sa-update_add--siteconfigpath.patch b/pkgs/servers/mail/spamassassin/sa-update_add--siteconfigpath.patch index 3264aefc072..bac048892fe 100644 --- a/pkgs/servers/mail/spamassassin/sa-update_add--siteconfigpath.patch +++ b/pkgs/servers/mail/spamassassin/sa-update_add--siteconfigpath.patch @@ -30,7 +30,7 @@ index bb7396d..39f681f 100755 # check only disabled gpg # https://issues.apache.org/SpamAssassin/show_bug.cgi?id=5854 -@@ -1808,6 +1812,7 @@ Options: +@@ -1808,7 +1812,7 @@ Options: --updatedir path Directory to place updates, defaults to the SpamAssassin site rules directory (default: @@LOCAL_STATE_DIR@@/@@VERSION@@) @@ -39,21 +39,6 @@ index bb7396d..39f681f 100755 -D, --debug [area=n,...] Print debugging messages -v, --verbose Be verbose, like print updated channel names; -- -diff --git a/lib/Mail/SpamAssassin/PerMsgStatus.pm b/lib/Mail/SpamAssassin/PerMsgStatus.pm -index 6d8beaa..6ad87dc 100644 ---- a/lib/Mail/SpamAssassin/PerMsgStatus.pm -+++ b/lib/Mail/SpamAssassin/PerMsgStatus.pm -@@ -389,7 +389,8 @@ sub check_timed { - if (!$self->{main}->have_plugin("check_main")) { - die "check: no loaded plugin implements 'check_main': cannot scan!\n". - "Check that the necessary '.pre' files are in the config directory.\n". -- "At a minimum, v320.pre loads the Check plugin which is required.\n"; -+ "At a minimum, v320.pre loads the Check plugin which is required.\n". -+ "NixOS: Since there is no '/etc/spamassassin' simply restart 'spamd.service' which on its behalf will run 'sa-learn --siteconfigpath=/nix/store/l4hr4yxk8mb4wbkha6vm6rh92pj19rj6-spamd-env ...' to update the /var/lib/spamassassin configs.\n"; - } - } - --- 2.12.2 diff --git a/pkgs/servers/matrix-synapse/default.nix b/pkgs/servers/matrix-synapse/default.nix index 608ac6028f4..295881b03a3 100644 --- a/pkgs/servers/matrix-synapse/default.nix +++ b/pkgs/servers/matrix-synapse/default.nix @@ -23,11 +23,11 @@ let in buildPythonApplication rec { pname = "matrix-synapse"; - version = "1.9.0"; + version = "1.9.1"; src = fetchPypi { inherit pname version; - sha256 = "0ghmxzk2njid7d7ccggda8a9zx4dg1r59n5ymp8f2n9kxz7z2rj2"; + sha256 = "13csf18dchm75vw251a7h57diag94vw6rhg8kkkbpi35cibn0cz2"; }; patches = [ diff --git a/pkgs/servers/memcached/default.nix b/pkgs/servers/memcached/default.nix index dfb3ac2cfa2..004822b906c 100644 --- a/pkgs/servers/memcached/default.nix +++ b/pkgs/servers/memcached/default.nix @@ -1,12 +1,12 @@ {stdenv, fetchurl, cyrus_sasl, libevent}: stdenv.mkDerivation rec { - version = "1.5.20"; + version = "1.5.21"; pname = "memcached"; src = fetchurl { url = "https://memcached.org/files/${pname}-${version}.tar.gz"; - sha256 = "1r511qr95q0ywdaql3pdjiwzkfqxhhfzb13ilvl7mznfm4iv1myg"; + sha256 = "1x4jzrz09aq4nllkarn7d5x77gsys5l3nvfj8c7j4nvmvc30rlg3"; }; configureFlags = [ diff --git a/pkgs/servers/monitoring/grafana/default.nix b/pkgs/servers/monitoring/grafana/default.nix index 183bbc73f5d..1148f6ca25e 100644 --- a/pkgs/servers/monitoring/grafana/default.nix +++ b/pkgs/servers/monitoring/grafana/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "grafana"; - version = "6.5.3"; + version = "6.6.0"; goPackagePath = "github.com/grafana/grafana"; @@ -12,12 +12,12 @@ buildGoPackage rec { rev = "v${version}"; owner = "grafana"; repo = "grafana"; - sha256 = "1ks951b3ar1wdpbxn8ak74m8zh02d3lbmk6mphwni68c019ymahi"; + sha256 = "0pdhi3lrcfyr60cs93dqskkwlbn7ic4jngaksa3y6kicy6z1nmgz"; }; srcStatic = fetchurl { url = "https://dl.grafana.com/oss/release/grafana-${version}.linux-amd64.tar.gz"; - sha256 = "1gjj0h7kz4lan00ka5kg901l3nyzswnjfr0slqy08bl4svqpizh2"; + sha256 = "1xp92kbvgyb3pl0sslwdn6bai41ym0yr26wp8qj39rvqamsh86g2"; }; postPatch = '' diff --git a/pkgs/servers/monitoring/seyren/default.nix b/pkgs/servers/monitoring/seyren/default.nix index eb98e45c36c..5312ecb0692 100644 --- a/pkgs/servers/monitoring/seyren/default.nix +++ b/pkgs/servers/monitoring/seyren/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "seyren"; - version = "1.1.0"; + version = "1.5.0"; src = fetchurl { url = "https://github.com/scobal/seyren/releases/download/${version}/seyren-${version}.jar"; - sha256 = "10m64zdci4swlvivii1jnmrwfi461af3xvn0xvwvy7i8kyb56vrr"; + sha256 = "1fixij04n8hgmaj8kw8i6vclwyd6n94x0n6ify73ynm6dfv8g37x"; }; phases = ["installPhase"]; diff --git a/pkgs/servers/mtprotoproxy/default.nix b/pkgs/servers/mtprotoproxy/default.nix index 550ee4c160f..4838fed47fb 100644 --- a/pkgs/servers/mtprotoproxy/default.nix +++ b/pkgs/servers/mtprotoproxy/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "mtprotoproxy"; - version = "1.0.8"; + version = "1.0.9"; src = fetchFromGitHub { owner = "alexbers"; repo = "mtprotoproxy"; rev = "v${version}"; - sha256 = "1bpgbqbgy7c637bzm6g5msm2i10dfl4qb7psy3k3cbaysw696kjc"; + sha256 = "16f9hzh4h41qb5962lxx04653ncar83znh872g2qh564b6f922z2"; }; nativeBuildInputs = [ wrapPython ]; diff --git a/pkgs/servers/nosql/victoriametrics/default.nix b/pkgs/servers/nosql/victoriametrics/default.nix new file mode 100644 index 00000000000..45d3d3cc559 --- /dev/null +++ b/pkgs/servers/nosql/victoriametrics/default.nix @@ -0,0 +1,21 @@ +{ lib, buildGoModule, fetchFromGitHub }: + +buildGoModule rec { + pname = "VictoriaMetrics"; + version = "1.32.5"; + + src = fetchFromGitHub { + owner = pname; + repo = pname; + rev = "v${version}"; + sha256 = "1i3l8bkii3x8wnq9a8yn48cchni5h0gy3rrpvg0jgm4kmm5dlq4y"; + }; + + modSha256 = "0696p1hv5z3dvawizvw0yi4xzl41bsmszkdqayzb37nm5cfk8riq"; + meta = with lib; { + homepage = "https://victoriametrics.com/"; + description = "fast, cost-effective and scalable time series database, long-term remote storage for Prometheus"; + license = licenses.asl20; + maintainers = [ maintainers.yorickvp ]; + }; +} diff --git a/pkgs/servers/sip/freeswitch/default.nix b/pkgs/servers/sip/freeswitch/default.nix index aeedf8b30ae..f6791d01088 100644 --- a/pkgs/servers/sip/freeswitch/default.nix +++ b/pkgs/servers/sip/freeswitch/default.nix @@ -111,6 +111,8 @@ stdenv.mkDerivation rec { ++ lib.unique (lib.concatMap (mod: mod.inputs) enabledModules) ++ lib.optionals stdenv.isDarwin [ SystemConfiguration ]; + enableParallelBuilding = true; + NIX_CFLAGS_COMPILE = "-Wno-error"; hardeningDisable = [ "format" ]; @@ -123,6 +125,8 @@ stdenv.mkDerivation rec { postInstall = '' # helper for compiling modules... not generally useful; also pulls in perl dependency rm "$out"/bin/fsxs + # include configuration templates + cp -r conf $out/share/freeswitch/ ''; meta = { diff --git a/pkgs/servers/uftp/default.nix b/pkgs/servers/uftp/default.nix index 0dfec772a18..13e7fb7b93b 100644 --- a/pkgs/servers/uftp/default.nix +++ b/pkgs/servers/uftp/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "uftp"; - version = "4.10"; + version = "4.10.1"; src = fetchurl { url = "mirror://sourceforge/uftp-multicast/source-tar/uftp-${version}.tar.gz"; - sha256 = "14pjhc8a8fgm5cyy93r693nrjinaps6642v00jpwrjf7h2p8mfli"; + sha256 = "1xi2cvn1lxk1h1kilmjiq8ybxln3rrh6m5cd340zg20vpzz56cwh"; }; buildInputs = [ openssl ]; diff --git a/pkgs/tools/admin/eksctl/default.nix b/pkgs/tools/admin/eksctl/default.nix index 3cadafc633e..89c8e2866e4 100644 --- a/pkgs/tools/admin/eksctl/default.nix +++ b/pkgs/tools/admin/eksctl/default.nix @@ -2,16 +2,16 @@ buildGoModule rec { pname = "eksctl"; - version = "0.12.0"; + version = "0.13.0"; src = fetchFromGitHub { owner = "weaveworks"; repo = pname; rev = version; - sha256 = "1m4hcj2bi9v3ngjj2x1fifcnb450jrij06vbi3j28slsdwn1bcc8"; + sha256 = "13kxilsy0fdzg1phzcsxfg53flzx3xk6c5jyygggajp45aysbyra"; }; - modSha256 = "1c8qyxzfazgw77rlv3yw2x39ymaq66jjd51im0jl4131a6hzj6fd"; + modSha256 = "0g5alqhwna9sd6dp50waqa87af2z3n5pj5mwnb9i2y65g2kclaha"; subPackages = [ "cmd/eksctl" ]; diff --git a/pkgs/tools/admin/lego/default.nix b/pkgs/tools/admin/lego/default.nix index fa7c3876a28..48daaa418bb 100644 --- a/pkgs/tools/admin/lego/default.nix +++ b/pkgs/tools/admin/lego/default.nix @@ -2,18 +2,22 @@ buildGoModule rec { pname = "lego"; - version = "3.2.0"; + version = "3.3.0"; src = fetchFromGitHub { owner = "go-acme"; repo = pname; rev = "v${version}"; - sha256 = "1djvwyjg30f9bj61pf3y2k2w055pj39v0sif4rjqg8cz0j382a2z"; + sha256 = "135zz5gp5vqqwmz3701n5xfvz9yxzm4m53q3dbj9vfc8xkcxn44n"; }; - modSha256 = "0k3p11cji3p4nzr8aia8hp01wyx1qfx84259dwbfwg1b32ln8rkc"; + modSha256 = "0jirpfd427317px0fd630bmi3li6zc5vihydwmwbj0qsfvhn4qm4"; subPackages = [ "cmd/lego" ]; + buildFlagsArray = [ + "-ldflags=-X main.version=${version}" + ]; + meta = with lib; { description = "Let's Encrypt client and ACME library written in Go"; license = licenses.mit; diff --git a/pkgs/tools/compression/upx/default.nix b/pkgs/tools/compression/upx/default.nix index 7f9c7cb7773..f602a52d85a 100644 --- a/pkgs/tools/compression/upx/default.nix +++ b/pkgs/tools/compression/upx/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { pname = "upx"; - version = "3.95"; + version = "3.96"; src = fetchurl { url = "https://github.com/upx/upx/releases/download/v${version}/${pname}-${version}-src.tar.xz"; - sha256 = "14jmgy7hvx4zqra20w8260wrcxmjf2h6ba2yrw7pcp18im35a3rv"; + sha256 = "051pk5jk8fcfg5mpgzj43z5p4cn7jy5jbyshyn78dwjqr7slsxs7"; }; CXXFLAGS = "-Wno-unused-command-line-argument"; diff --git a/pkgs/tools/filesystems/squashfs-tools-ng/0001-Fix-build-on-BSD-systems.patch b/pkgs/tools/filesystems/squashfs-tools-ng/0001-Fix-build-on-BSD-systems.patch deleted file mode 100644 index 2834b046cef..00000000000 --- a/pkgs/tools/filesystems/squashfs-tools-ng/0001-Fix-build-on-BSD-systems.patch +++ /dev/null @@ -1,103 +0,0 @@ -From ea1bc0fcfd33191002c5d1f7072c1c02bb7ec4af Mon Sep 17 00:00:00 2001 -From: Alyssa Ross <hi@alyssa.is> -Date: Thu, 14 Nov 2019 15:45:46 +0000 -Subject: [PATCH] Fix build on BSD systems - -I tested FreeBSD, DragonflyBSD, NetBSD and OpenBSD and the endian -macros weren't necessary (and in fact caused errors) on all of them. - -Because OpenBSD ships with an ancient GCC that doesn't support the -checked addition/multiplication builtins, the build there would fail -unless built with CC=cc or CC=clang. I changed configure.ac to prefer -cc over gcc, so that the distribution's compiler preference is -respected. (The default is [gcc cc]). I had to move AC_PROG_CC above -LT_INIT because otherwise LT_INIT would run AC_PROG_CC first, and we -wouldn't have a chance to use non-default parameters. ---- - configure.ac | 2 +- - include/util/compat.h | 13 +++++-------- - lib/common/dirstack.c | 1 + - lib/common/mkdir_p.c | 2 +- - 4 files changed, 8 insertions(+), 10 deletions(-) - -diff --git a/configure.ac b/configure.ac -index 018b3f6..19ea0ed 100644 ---- a/configure.ac -+++ b/configure.ac -@@ -3,8 +3,8 @@ AC_INIT([squashfs-tools-ng], [0.7], [goliath@infraroot.at], squashfs-tools-ng) - AC_CONFIG_MACRO_DIR([m4]) - AM_INIT_AUTOMAKE([foreign dist-xz subdir-objects]) - AM_SILENT_RULES([yes]) -+AC_PROG_CC([cc gcc clang]) - LT_INIT --AC_PROG_CC - AC_PROG_CC_C99 - AC_PROG_INSTALL - AC_SYS_LARGEFILE -diff --git a/include/util/compat.h b/include/util/compat.h -index 74d0b6f..f53fd0e 100644 ---- a/include/util/compat.h -+++ b/include/util/compat.h -@@ -7,6 +7,10 @@ - #ifndef COMPAT_H - #define COMPAT_H - -+#ifndef __linux__ -+#define O_PATH 0 -+#endif -+ - #if defined(__APPLE__) - #include <libkern/OSByteOrder.h> - -@@ -17,14 +21,8 @@ - #define le32toh(x) OSSwapLittleToHostInt32(x) - #define le16toh(x) OSSwapLittleToHostInt16(x) - #define le64toh(x) OSSwapLittleToHostInt64(x) --#elif defined(__OpenBSD__) -+#elif defined(__DragonFly__) || defined(__FreeBSD__) || defined(__NetBSD__) || defined(__OpenBSD__) - #include <sys/endian.h> --#elif defined(__NetBSD__) || defined(__FreeBSD__) || defined(__DragonFly__) --#include <sys/endian.h> -- --#define le16toh(x) letoh16(x) --#define le32toh(x) letoh32(x) --#define le64toh(x) letoh64(x) - #elif defined(_WIN32) || defined(__WINDOWS__) - #define htole16(x) (x) - #define htole32(x) (x) -@@ -89,7 +87,6 @@ - #else - #include <sys/types.h> - #include <sys/stat.h> --#include <sys/sysmacros.h> - #endif - - #endif /* COMPAT_H */ -diff --git a/lib/common/dirstack.c b/lib/common/dirstack.c -index 8f73898..f8d1278 100644 ---- a/lib/common/dirstack.c -+++ b/lib/common/dirstack.c -@@ -5,6 +5,7 @@ - * Copyright (C) 2019 David Oberhollenzer <goliath@infraroot.at> - */ - #include "common.h" -+#include "util/compat.h" - - #include <string.h> - #include <stdlib.h> -diff --git a/lib/common/mkdir_p.c b/lib/common/mkdir_p.c -index cb433b3..95187ba 100644 ---- a/lib/common/mkdir_p.c -+++ b/lib/common/mkdir_p.c -@@ -7,7 +7,7 @@ - #include "common.h" - - #include <string.h> --#include <alloca.h> -+#include <stdlib.h> - #include <stdio.h> - #include <errno.h> - --- -2.23.0 - diff --git a/pkgs/tools/filesystems/squashfs-tools-ng/default.nix b/pkgs/tools/filesystems/squashfs-tools-ng/default.nix index 727e257a486..bc8ce7b19c5 100644 --- a/pkgs/tools/filesystems/squashfs-tools-ng/default.nix +++ b/pkgs/tools/filesystems/squashfs-tools-ng/default.nix @@ -1,20 +1,17 @@ -{ stdenv, lib, fetchurl, fetchpatch, autoreconfHook, doxygen, graphviz, perl -, pkgconfig, lz4, xz, zlib, zstd +{ stdenv, lib, fetchurl, doxygen, graphviz, perl, pkgconfig +, lz4, xz, zlib, zstd }: stdenv.mkDerivation rec { pname = "squashfs-tools-ng"; - version = "0.7"; + version = "0.8"; src = fetchurl { url = "https://infraroot.at/pub/squashfs/squashfs-tools-ng-${version}.tar.xz"; - sha256 = "01yn621dnsfhrah3qj1xh6ynag7r3nvihc510sa5frapkyg9nw8n"; + sha256 = "1km18qm9kgmm39aj9yq2aaq99708nmj9cpa9lqf5bp1y617bhh7y"; }; - patches = lib.optional (!stdenv.isLinux) ./0001-Fix-build-on-BSD-systems.patch; - - nativeBuildInputs = [ doxygen graphviz pkgconfig perl ] - ++ lib.optional (!stdenv.isLinux) autoreconfHook; + nativeBuildInputs = [ doxygen graphviz pkgconfig perl ]; buildInputs = [ zlib xz lz4 zstd ]; meta = with lib; { @@ -22,5 +19,6 @@ stdenv.mkDerivation rec { license = licenses.gpl3Plus; maintainers = with maintainers; [ qyliss ]; platforms = platforms.unix; + broken = stdenv.isDarwin; }; } diff --git a/pkgs/tools/networking/brook/default.nix b/pkgs/tools/networking/brook/default.nix index 482a949482f..1b3b22b2adf 100644 --- a/pkgs/tools/networking/brook/default.nix +++ b/pkgs/tools/networking/brook/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "brook"; - version = "20190601"; + version = "20200102"; goPackagePath = "github.com/txthinking/brook"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "txthinking"; repo = pname; rev = "v${version}"; - sha256 = "04gx1p447wabw3d18s9sm8ynlvj2bp8ac9dsgs08kd1dyrsjlljk"; + sha256 = "17h74p4apghljiyqjxgk6c4hqnyqs4lsn15gbysx26r4cvzglpx6"; }; goDeps = ./deps.nix; diff --git a/pkgs/tools/networking/brook/deps.nix b/pkgs/tools/networking/brook/deps.nix index a9a8d5e43e3..9ccb446b5e5 100644 --- a/pkgs/tools/networking/brook/deps.nix +++ b/pkgs/tools/networking/brook/deps.nix @@ -1,11 +1,39 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.3.0 [ { goPackagePath = "github.com/urfave/cli"; fetch = { type = "git"; url = "https://github.com/urfave/cli"; - rev = "a1c7408de3f632d86eee604a3bb755f1ffb68226"; - sha256 = "1fq0amfgpccf35nll7xw0k6smwrb7h0wy62n70kfd9kvh64n8hbn"; + rev = "3f8c3bca5729c9b679beffd0d88a67d468f832fd"; + sha256 = "07m5dfp5190wczdw2vqzz4srcpjz5lci1z12rzww9pg9pdjs63gy"; + }; + } + { + goPackagePath = "github.com/cpuguy83/go-md2man"; + fetch = { + type = "git"; + url = "https://github.com/cpuguy83/go-md2man"; + rev = "217d7bd9dd5494abdf2877afbeb24ba0e11b43d6"; + sha256 = "0vsmdrh5c5ngrnq91yg40l8388vh7l1p4wlv4lh7p977dp75ivg6"; + }; + } + { + goPackagePath = "github.com/gorilla/mux"; + fetch = { + type = "git"; + url = "https://github.com/gorilla/mux"; + rev = "75dcda0896e109a2a22c9315bca3bb21b87b2ba5"; + sha256 = "1d0sy1paa055ic84sp3766s9pa24q008hf77dc842vrgvn8p3wmh"; + }; + } + { + goPackagePath = "github.com/gorilla/websocket"; + fetch = { + type = "git"; + url = "https://github.com/gorilla/websocket"; + rev = "c3e18be99d19e6b3e8f1559eea2c161a665c4b6b"; + sha256 = "03n1n0nwz3k9qshmriycqznnnvd3dkzsfwpnfjzzvafjxk9kyapv"; }; } { @@ -13,8 +41,8 @@ fetch = { type = "git"; url = "https://github.com/mdp/qrterminal"; - rev = "ee9ef6b3f704870848e4022c4bc8c4d8c192516c"; - sha256 = "19dwrmkd1hqjngpmz05y9d0gxzxmdx1plya91ja08s1c1nqc264f"; + rev = "b74f0e01e9f532111951caf89df78e5619193db5"; + sha256 = "1xz5f3dfkdwd6svnbh98rlr5pfr4s4hrqs4vffn9wy5vb336pp8p"; }; } { @@ -22,8 +50,8 @@ fetch = { type = "git"; url = "https://github.com/miekg/dns"; - rev = "d16ecb693e3f8d524769fefce2192a4c92207ff9"; - sha256 = "0x0danna6nzkbiprwjpj0bix2m25lsbvna1bncdm233l3prh8sb1"; + rev = "6c0c4e6581f8e173cc562c8b3363ab984e4ae071"; + sha256 = "0fpd9alvhzrkb1c31n4lrxlpv1nlhy51w1yg39xxb3mjmrb7lby1"; }; } { @@ -31,8 +59,8 @@ fetch = { type = "git"; url = "https://github.com/patrickmn/go-cache"; - rev = "5633e0862627c011927fa39556acae8b1f1df58a"; - sha256 = "1zjk6yvig68zcbipa85dxz9xa82fk4zp4q33hwzxdv6h68wga5bs"; + rev = "46f407853014144407b6c2ec7ccc76bf67958d93"; + sha256 = "08155wdk2883qw37p7wgrpv8wb9lbx4cpfgrraivdavs3qbjlq5j"; }; } { @@ -67,8 +95,17 @@ fetch = { type = "git"; url = "https://github.com/txthinking/x"; - rev = "8956479d309307bcd91c2ec89370118aef61abf7"; - sha256 = "0vfsbm5025cpmqpc506vz1vqlzmcw5sc1zrjgx8z22kp1q1slylv"; + rev = "99b19c1440b66f803ee98b30b6829651cc3f90cc"; + sha256 = "0vzw9wxlgj21y35qv580806vy6k6w1z5yqd5n6ccnq8cd3lvmx70"; + }; + } + { + goPackagePath = "github.com/urfave/negroni"; + fetch = { + type = "git"; + url = "https://github.com/urfave/negroni"; + rev = "f4316798d5d3acd39eb6784301b19f27f471415f"; + sha256 = "0w4iva6s8v8sk95l8mb1a67v0bn4h7njyylv9dnwma0d3l7k24y3"; }; } { @@ -76,8 +113,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/crypto"; - rev = "20be4c3c3ed52bfccdb2d59a412ee1a936d175a7"; - sha256 = "1ph7y8v30hc95h1dwr7vrhg1nzs47a261qin6zg8mhf12g5k2lxb"; + rev = "69ecbb4d6d5dab05e49161c6e77ea40a030884e1"; + sha256 = "1ylm1lp1miihaq93p8rh2yh823qljqkyqwk3gjzk2bdvzz427pr5"; }; } { @@ -85,8 +122,17 @@ fetch = { type = "git"; url = "https://go.googlesource.com/net"; - rev = "f3200d17e092c607f615320ecaad13d87ad9a2b3"; - sha256 = "1mskh7p80dd8j1ffy16917d3cyy7lfh1gb56n4rq9g1bwckz4lwy"; + rev = "6afb5195e5aab057fda82e27171243402346b0ad"; + sha256 = "1aiz41q2yxgg3dxfkn33ff54vhaxbiwcps9j3ia1xx4cqxim38zw"; + }; + } + { + goPackagePath = "golang.org/x/sys"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sys"; + rev = "9fbb57f87de9ccfe3a99d4e3270ce8a926ebba4f"; + sha256 = "0qaz2jjkrxzgkapmjqingdwamrgq2aiblxvzzgrcsv2qhkj0wdps"; }; } { @@ -94,8 +140,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/text"; - rev = "342b2e1fbaa52c93f31447ad2c6abc048c63e475"; - sha256 = "0flv9idw0jm5nm8lx25xqanbkqgfiym6619w575p7nrdh0riqwqh"; + rev = "929e72ca90deac4784bbe451caf10faa5b256ebe"; + sha256 = "0kwyw87bx0rsc5bbqrrg36yv2b7rs4ijs4p4444s8zwzq6sw24y8"; }; } { diff --git a/pkgs/tools/networking/keepalived/default.nix b/pkgs/tools/networking/keepalived/default.nix index 87748211425..68d253ef0b8 100644 --- a/pkgs/tools/networking/keepalived/default.nix +++ b/pkgs/tools/networking/keepalived/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { pname = "keepalived"; - version = "2.0.19"; + version = "2.0.20"; src = fetchFromGitHub { owner = "acassen"; repo = "keepalived"; rev = "v${version}"; - sha256 = "05jgr0f04z69x3zf3b9z04wczl15fnh69bs6j0yw55fij1k9nj4d"; + sha256 = "0ijzw56hbac24dhrgjd0hjgf45072imyzq3mcgsirdl3xqjc6x12"; }; buildInputs = [ diff --git a/pkgs/tools/networking/whois/default.nix b/pkgs/tools/networking/whois/default.nix index e079f9a881e..2306359addf 100644 --- a/pkgs/tools/networking/whois/default.nix +++ b/pkgs/tools/networking/whois/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, perl, gettext, pkgconfig, libidn2, libiconv }: stdenv.mkDerivation rec { - version = "5.5.3"; + version = "5.5.5"; pname = "whois"; src = fetchFromGitHub { owner = "rfc1036"; repo = "whois"; rev = "v${version}"; - sha256 = "099yvqng085f69k815961jnwk50nzmiknvhl1wwmji2hl36r160g"; + sha256 = "01gni315lnkyrwd173fqw0c12qrisfb38wy066s2j85nq64a3nqv"; }; nativeBuildInputs = [ perl gettext pkgconfig ]; diff --git a/pkgs/tools/package-management/cargo-about/default.nix b/pkgs/tools/package-management/cargo-about/default.nix index 2e1384693ec..5d741e25fb9 100644 --- a/pkgs/tools/package-management/cargo-about/default.nix +++ b/pkgs/tools/package-management/cargo-about/default.nix @@ -1,16 +1,16 @@ { lib, rustPlatform, fetchFromGitHub }: rustPlatform.buildRustPackage rec { pname = "cargo-about"; - version = "0.1.1"; + version = "0.2.0"; src = fetchFromGitHub { owner = "EmbarkStudios"; repo = "cargo-about"; rev = "${version}"; - sha256 = "1n9274np1ibz1s35q1qqajnwj7w4l695js9xdbga5wim18ly622m"; + sha256 = "0bsay1vqi5b3z7qjwbkwx3ikmpjzc0kswbajm50xmcwlg8jrn420"; }; - cargoSha256 = "0zjvvqw68y6zmjzmd22hh246422x2kxljj73vxywkl18crkakd7k"; + cargoSha256 = "1mqicibpa9sxac8v2kk8vfvxcis2wkdkklia2pbspc0pz3h0c8if"; meta = with lib; { description = "Cargo plugin to generate list of all licenses for a crate"; diff --git a/pkgs/tools/security/bitwarden_rs/cargo-lock-lettre.patch b/pkgs/tools/security/bitwarden_rs/cargo-lock-lettre.patch deleted file mode 100644 index d9f491ca290..00000000000 --- a/pkgs/tools/security/bitwarden_rs/cargo-lock-lettre.patch +++ /dev/null @@ -1,58 +0,0 @@ -diff --git a/Cargo.lock b/Cargo.lock -index 2e0b695..6d23410 100644 ---- a/Cargo.lock -+++ b/Cargo.lock -@@ -114,8 +114,8 @@ dependencies = [ - "handlebars 1.1.0 (registry+https://github.com/rust-lang/crates.io-index)", - "jsonwebtoken 6.0.1 (registry+https://github.com/rust-lang/crates.io-index)", - "lazy_static 1.3.0 (registry+https://github.com/rust-lang/crates.io-index)", -- "lettre 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)", -- "lettre_email 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)", -+ "lettre 0.9.2 (registry+https://github.com/rust-lang/crates.io-index)", -+ "lettre_email 0.9.2 (registry+https://github.com/rust-lang/crates.io-index)", - "libsqlite3-sys 0.12.0 (registry+https://github.com/rust-lang/crates.io-index)", - "log 0.4.6 (registry+https://github.com/rust-lang/crates.io-index)", - "multipart 0.16.1 (registry+https://github.com/rust-lang/crates.io-index)", -@@ -1007,13 +1007,11 @@ source = "registry+https://github.com/rust-lang/crates.io-index" - - [[package]] - name = "lettre" --version = "0.9.1" -+version = "0.9.2" - source = "registry+https://github.com/rust-lang/crates.io-index" - dependencies = [ - "base64 0.10.1 (registry+https://github.com/rust-lang/crates.io-index)", - "bufstream 0.1.4 (registry+https://github.com/rust-lang/crates.io-index)", -- "failure 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)", -- "failure_derive 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)", - "fast_chemail 0.9.6 (registry+https://github.com/rust-lang/crates.io-index)", - "hostname 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)", - "log 0.4.6 (registry+https://github.com/rust-lang/crates.io-index)", -@@ -1026,14 +1024,12 @@ dependencies = [ - - [[package]] - name = "lettre_email" --version = "0.9.1" -+version = "0.9.2" - source = "registry+https://github.com/rust-lang/crates.io-index" - dependencies = [ - "base64 0.10.1 (registry+https://github.com/rust-lang/crates.io-index)", - "email 0.0.20 (registry+https://github.com/rust-lang/crates.io-index)", -- "failure 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)", -- "failure_derive 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)", -- "lettre 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)", -+ "lettre 0.9.2 (registry+https://github.com/rust-lang/crates.io-index)", - "mime 0.3.13 (registry+https://github.com/rust-lang/crates.io-index)", - "time 0.1.42 (registry+https://github.com/rust-lang/crates.io-index)", - "uuid 0.7.4 (registry+https://github.com/rust-lang/crates.io-index)", -@@ -2858,8 +2854,8 @@ dependencies = [ - "checksum language-tags 0.2.2 (registry+https://github.com/rust-lang/crates.io-index)" = "a91d884b6667cd606bb5a69aa0c99ba811a115fc68915e7056ec08a46e93199a" - "checksum lazy_static 1.3.0 (registry+https://github.com/rust-lang/crates.io-index)" = "bc5729f27f159ddd61f4df6228e827e86643d4d3e7c32183cb30a1c08f604a14" - "checksum lazycell 1.2.1 (registry+https://github.com/rust-lang/crates.io-index)" = "b294d6fa9ee409a054354afc4352b0b9ef7ca222c69b8812cbea9e7d2bf3783f" --"checksum lettre 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)" = "646aee0a55545eaffdf0df1ac19b500b51adb3095ec4dfdc704134e56ea23531" --"checksum lettre_email 0.9.1 (registry+https://github.com/rust-lang/crates.io-index)" = "ae1b3d43e4bb7beb9974a359cbb3ea4f93dfba6c1c0c6e9c9f82e538e0f9ab9f" -+"checksum lettre 0.9.2 (registry+https://github.com/rust-lang/crates.io-index)" = "c66afaa5dfadbb81d4e00fd1d1ab057c7cd4c799c5a44e0009386d553587e728" -+"checksum lettre_email 0.9.2 (registry+https://github.com/rust-lang/crates.io-index)" = "bbb68ca999042d965476e47bbdbacd52db0927348b6f8062c44dd04a3b1fd43b" - "checksum libc 0.2.55 (registry+https://github.com/rust-lang/crates.io-index)" = "42914d39aad277d9e176efbdad68acb1d5443ab65afe0e0e4f0d49352a950880" - "checksum libsqlite3-sys 0.12.0 (registry+https://github.com/rust-lang/crates.io-index)" = "fd6457c70bbff456d9fe49deaba35ec47c3e598bf8d7950ff0575ceb7a8a6ad1" - "checksum lock_api 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)" = "62ebf1391f6acad60e5c8b43706dde4582df75c06698ab44511d15016bc2442c" diff --git a/pkgs/tools/security/bitwarden_rs/default.nix b/pkgs/tools/security/bitwarden_rs/default.nix index f04996f1b43..1b262581eb2 100644 --- a/pkgs/tools/security/bitwarden_rs/default.nix +++ b/pkgs/tools/security/bitwarden_rs/default.nix @@ -1,31 +1,43 @@ -{ stdenv, rustPlatform, fetchFromGitHub, pkgconfig, openssl, Security, CoreServices }: +{ stdenv, rustPlatform, fetchFromGitHub +, pkgconfig, openssl +, Security, CoreServices +, dbBackend ? "sqlite", libmysqlclient, postgresql }: -rustPlatform.buildRustPackage rec { +let + featuresFlag = "--features ${dbBackend}"; + +in rustPlatform.buildRustPackage rec { pname = "bitwarden_rs"; - version = "1.9.1"; + version = "1.13.1"; src = fetchFromGitHub { owner = "dani-garcia"; repo = pname; rev = version; - sha256 = "0jfb4b2lp2v01aw615lx0qj1qh73hyrbjn9kva7zqp74wcfw12gp"; + sha256 = "0af8cnpx86a096m59wmszcfyrfgf7adlqr39phbg647mgjfzwcrk"; }; - cargoPatches = [ - # type annotations required: cannot resolve `std::string::String: std::convert::AsRef<_>` - ./cargo-lock-lettre.patch - ]; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ openssl ] ++ stdenv.lib.optionals stdenv.isDarwin [ Security CoreServices ]; + buildInputs = with stdenv.lib; [ openssl ] + ++ optionals stdenv.isDarwin [ Security CoreServices ] + ++ optional (dbBackend == "mysql") libmysqlclient + ++ optional (dbBackend == "postgresql") postgresql; RUSTC_BOOTSTRAP = 1; - cargoSha256 = "0p39gqrqdmgqhngp1qyh6jl0sp0ifj5n3bxfqafjbspb4zph3ls4"; + cargoSha256 = "1v6n4aqhd5pyvvhlzhpmq7ykclfxw82wn2bg7n49b53d9p72jwq6"; + cargoBuildFlags = [ featuresFlag ]; + + checkPhase = '' + runHook preCheck + echo "Running cargo cargo test ${featuresFlag} -- ''${checkFlags} ''${checkFlagsArray+''${checkFlagsArray[@]}}" + cargo test ${featuresFlag} -- ''${checkFlags} ''${checkFlagsArray+"''${checkFlagsArray[@]}"} + runHook postCheck + ''; meta = with stdenv.lib; { - description = "An unofficial lightweight implementation of the Bitwarden server API using Rust and SQLite"; - homepage = https://github.com/dani-garcia/bitwarden_rs; + description = "Unofficial Bitwarden compatible server written in Rust"; + homepage = "https://github.com/dani-garcia/bitwarden_rs"; license = licenses.gpl3; maintainers = with maintainers; [ msteen ]; platforms = platforms.all; diff --git a/pkgs/tools/security/bitwarden_rs/vault.nix b/pkgs/tools/security/bitwarden_rs/vault.nix index 51dde99bcf1..9cbf067d40b 100644 --- a/pkgs/tools/security/bitwarden_rs/vault.nix +++ b/pkgs/tools/security/bitwarden_rs/vault.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "bitwarden_rs-vault"; - version = "2.12.0"; + version = "2.12.0b"; src = fetchurl { url = "https://github.com/dani-garcia/bw_web_builds/releases/download/v${version}/bw_web_v${version}.tar.gz"; - sha256 = "064dxfplqn67grpx03ryzshwmr7s00w4mll0hk0anddviwvd8r1n"; + sha256 = "01jwyhcam9kh8lpxfgzzw7r3nn9sn6jbgmd78a7h8r50z5hy04g5"; }; buildCommand = '' diff --git a/pkgs/tools/security/default.nix b/pkgs/tools/security/ecdsatool/default.nix index 0e57a5bab88..0e57a5bab88 100644 --- a/pkgs/tools/security/default.nix +++ b/pkgs/tools/security/ecdsatool/default.nix diff --git a/pkgs/tools/security/keybase/kbfs.nix b/pkgs/tools/security/keybase/kbfs.nix index 9448182a65a..20fadee6a40 100644 --- a/pkgs/tools/security/keybase/kbfs.nix +++ b/pkgs/tools/security/keybase/kbfs.nix @@ -6,7 +6,7 @@ buildGoPackage { inherit (keybase) src version; goPackagePath = "github.com/keybase/client"; - subPackages = [ "go/kbfs/kbfsfuse" "go/kbfs/kbfsgit/git-remote-keybase" ]; + subPackages = [ "go/kbfs/kbfsfuse" "go/kbfs/redirector" "go/kbfs/kbfsgit/git-remote-keybase" ]; dontRenameImports = true; diff --git a/pkgs/tools/security/qdigidoc/default.nix b/pkgs/tools/security/qdigidoc/default.nix index 7fc6ed20966..fcbc166689e 100644 --- a/pkgs/tools/security/qdigidoc/default.nix +++ b/pkgs/tools/security/qdigidoc/default.nix @@ -1,14 +1,14 @@ -{ stdenv, fetchgit, fetchurl, cmake, darkhttpd, gettext, makeWrapper, pkgconfig +{ stdenv, mkDerivation, fetchgit, fetchurl, cmake, darkhttpd, gettext, makeWrapper, pkgconfig , libdigidocpp, opensc, openldap, openssl, pcsclite, qtbase, qttranslations, qtsvg }: -stdenv.mkDerivation rec { +mkDerivation rec { pname = "qdigidoc"; - version = "4.1.0"; + version = "4.2.3"; src = fetchgit { url = "https://github.com/open-eid/DigiDoc4-Client"; rev = "v${version}"; - sha256 = "1iry36h3pfnw2gqjnfhv53i2svybxj8jf18qh486djyai84hjr4d"; + sha256 = "1hj49vvg8vrayr9kpz73fafa7k298hmiamkyd8c3ipy6s51xh6q4"; fetchSubmodules = true; }; @@ -42,9 +42,9 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Qt-based UI for signing and verifying DigiDoc documents"; - homepage = https://www.id.ee/; + homepage = "https://www.id.ee/"; license = licenses.lgpl21Plus; platforms = platforms.linux; - maintainers = with maintainers; [ yegortimoshenko ]; + maintainers = with maintainers; [ yegortimoshenko mmahut ]; }; } diff --git a/pkgs/tools/security/ripasso/cursive.nix b/pkgs/tools/security/ripasso/cursive.nix index b273b882daf..da850c6d9da 100644 --- a/pkgs/tools/security/ripasso/cursive.nix +++ b/pkgs/tools/security/ripasso/cursive.nix @@ -2,17 +2,17 @@ with rustPlatform; buildRustPackage rec { - version = "0.3.0"; + version = "0.4.0"; pname = "ripasso-cursive"; src = fetchFromGitHub { owner = "cortex"; repo = "ripasso"; rev = "release-${version}"; - sha256 = "1rkb23i9gcfmifcl31s8w86k7aza6nxrh3w33fvhv1ins1gxxk7w"; + sha256 = "164da20j727p8l7hh37j2r8pai9sj402nhswvg0nrlgj53nr6083"; }; - cargoSha256 = "1p0bsl4h2w257vfjbpqiga693gaslfq34g30dghpqb5n4kl416zp"; + cargoSha256 = "1vyhdbia7khh0ixim00knai5d270jl5a5crqik1qaz7bkwc02bsp"; cargoBuildFlags = [ "-p ripasso-cursive -p ripasso-man" ]; diff --git a/pkgs/tools/security/saml2aws/default.nix b/pkgs/tools/security/saml2aws/default.nix index 888d3bb4018..7d087884161 100644 --- a/pkgs/tools/security/saml2aws/default.nix +++ b/pkgs/tools/security/saml2aws/default.nix @@ -1,27 +1,27 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoModule, fetchFromGitHub }: -buildGoPackage rec { - name = "saml2aws-${version}"; +buildGoModule rec { pname = "saml2aws"; - version = "2.15.0"; - - goPackagePath = "github.com/versent/saml2aws"; - goDeps = ./deps.nix; - - buildFlagsArray = '' - -ldflags=-X main.Version=${version} - ''; + version = "2.19.0"; src = fetchFromGitHub { - rev = "v${version}"; owner = "Versent"; repo = "saml2aws"; - sha256 = "0pn4zdzisgan7vvgi7hp8716wsb2x33gq55c7fw1aa2qwy0bq3gp"; + rev = "v${version}"; + sha256 = "1b34v52nvn5mgkxj90lmw0hhpqb35gi3dn47x3v7255890wkzryz"; }; + modSha256 = "1ndr8npjjaxg97azshpca7mclxhbqm49wzswmv571y5x519bb7q8"; + + subPackages = [ "." "cmd/saml2aws" ]; + + buildFlagsArray = '' + -ldflags=-X main.Version=${version} + ''; + meta = with stdenv.lib; { description = "CLI tool which enables you to login and retrieve AWS temporary credentials using a SAML IDP"; - homepage = https://github.com/Versent/saml2aws; + homepage = "https://github.com/Versent/saml2aws"; license = licenses.mit; platforms = stdenv.lib.platforms.unix; maintainers = [ stdenv.lib.maintainers.pmyjavec ]; diff --git a/pkgs/tools/security/saml2aws/deps.nix b/pkgs/tools/security/saml2aws/deps.nix deleted file mode 100644 index 08a26db91b1..00000000000 --- a/pkgs/tools/security/saml2aws/deps.nix +++ /dev/null @@ -1,372 +0,0 @@ -# file generated from Gopkg.lock using dep2nix (https://github.com/nixcloud/dep2nix) -[ - { - goPackagePath = "github.com/99designs/keyring"; - fetch = { - type = "git"; - url = "https://github.com/99designs/keyring"; - rev = "82da6802f65f1ac7963cfc3b7c62ae12dab8ee5d"; - sha256 = "105ddy9vkjr6cmcm85qnxxlnsmkx2svm6bd80rzr9n6zyc5hhk7b"; - }; - } - { - goPackagePath = "github.com/AlecAivazis/survey"; - fetch = { - type = "git"; - url = "https://github.com/AlecAivazis/survey"; - rev = "e752db451e07e09c7d7dc8cada807a44bdb0fd47"; - sha256 = "00fhmsaymrf86pg246cqxvfrivgfkyg3i0aixsp3sn15hg3i0vlq"; - }; - } - { - goPackagePath = "github.com/Azure/go-ntlmssp"; - fetch = { - type = "git"; - url = "https://github.com/Azure/go-ntlmssp"; - rev = "4b934ac9dad38d389d34f0b98d98b2467c422012"; - sha256 = "0pwrax8mih2jgsdifag0346vh0vivgyz45jc4kjy6dhp3qhsy34z"; - }; - } - { - goPackagePath = "github.com/PuerkitoBio/goquery"; - fetch = { - type = "git"; - url = "https://github.com/PuerkitoBio/goquery"; - rev = "dc2ec5c7ca4d9aae063b79b9f581dd3ea6afd2b2"; - sha256 = "11010z9ask21r0dskvm2pbh3z8951bnpcqg8aqa213if4h34gaa2"; - }; - } - { - goPackagePath = "github.com/alecthomas/kingpin"; - fetch = { - type = "git"; - url = "https://github.com/alecthomas/kingpin"; - rev = "947dcec5ba9c011838740e680966fd7087a71d0d"; - sha256 = "0mndnv3hdngr3bxp7yxfd47cas4prv98sqw534mx7vp38gd88n5r"; - }; - } - { - goPackagePath = "github.com/alecthomas/template"; - fetch = { - type = "git"; - url = "https://github.com/alecthomas/template"; - rev = "a0175ee3bccc567396460bf5acd36800cb10c49c"; - sha256 = "0qjgvvh26vk1cyfq9fadyhfgdj36f1iapbmr5xp6zqipldz8ffxj"; - }; - } - { - goPackagePath = "github.com/alecthomas/units"; - fetch = { - type = "git"; - url = "https://github.com/alecthomas/units"; - rev = "2efee857e7cfd4f3d0138cc3cbb1b4966962b93a"; - sha256 = "1j65b91qb9sbrml9cpabfrcf07wmgzzghrl7809hjjhrmbzri5bl"; - }; - } - { - goPackagePath = "github.com/andybalholm/cascadia"; - fetch = { - type = "git"; - url = "https://github.com/andybalholm/cascadia"; - rev = "901648c87902174f774fac311d7f176f8647bdaa"; - sha256 = "09j8cavbhqqdxjqrkwbc40g8p0i49zf3184rpjm5p2rjbprcghcc"; - }; - } - { - goPackagePath = "github.com/aulanov/go.dbus"; - fetch = { - type = "git"; - url = "https://github.com/aulanov/go.dbus"; - rev = "25c3068a42a0b50b877953fb249dbcffc6bd1bca"; - sha256 = "0jh4jyxqhsl1rkzabhln7chw1jkzhqw2nn0mw79cmn8fyafi0rgn"; - }; - } - { - goPackagePath = "github.com/aws/aws-sdk-go"; - fetch = { - type = "git"; - url = "https://github.com/aws/aws-sdk-go"; - rev = "bfc1a07cf158c30c41a3eefba8aae043d0bb5bff"; - sha256 = "0vfpygjhdikmsqn9dgmp965ji5q790gcz9mg49mcpipc9n2lzx0d"; - }; - } - { - goPackagePath = "github.com/beevik/etree"; - fetch = { - type = "git"; - url = "https://github.com/beevik/etree"; - rev = "9d7e8feddccb4ed1b8afb54e368bd323d2ff652c"; - sha256 = "0f3lj7azxd5qq29hqd32211ds7n56i3rgmfll6c1f4css1f3srxg"; - }; - } - { - goPackagePath = "github.com/briandowns/spinner"; - fetch = { - type = "git"; - url = "https://github.com/briandowns/spinner"; - rev = "48dbb65d7bd5c74ab50d53d04c949f20e3d14944"; - sha256 = "1178kn72agihs13ffgm2sz5ad61pqwdmkrh8rhggzbaagch9mc75"; - }; - } - { - goPackagePath = "github.com/danieljoos/wincred"; - fetch = { - type = "git"; - url = "https://github.com/danieljoos/wincred"; - rev = "412b574fb496839b312a75fba146bd32a89001cf"; - sha256 = "1bb1928nnikx5036aw4152p55g8xgwx42rv0n2i5zydh1031f50m"; - }; - } - { - goPackagePath = "github.com/davecgh/go-spew"; - fetch = { - type = "git"; - url = "https://github.com/davecgh/go-spew"; - rev = "346938d642f2ec3594ed81d874461961cd0faa76"; - sha256 = "0d4jfmak5p6lb7n2r6yvf5p1zcw0l8j74kn55ghvr7zr7b7axm6c"; - }; - } - { - goPackagePath = "github.com/dvsekhvalnov/jose2go"; - fetch = { - type = "git"; - url = "https://github.com/dvsekhvalnov/jose2go"; - rev = "f21a8cedbbae609f623613ec8f81125c243212e6"; - sha256 = "1nzwvk6nqi7nm2wq4mr2q6k5p0qzsl0kmwx7kgkqsg1zh53250ld"; - }; - } - { - goPackagePath = "github.com/fatih/color"; - fetch = { - type = "git"; - url = "https://github.com/fatih/color"; - rev = "5b77d2a35fb0ede96d138fc9a99f5c9b6aef11b4"; - sha256 = "0v8msvg38r8d1iiq2i5r4xyfx0invhc941kjrsg5gzwvagv55inv"; - }; - } - { - goPackagePath = "github.com/go-ini/ini"; - fetch = { - type = "git"; - url = "https://github.com/go-ini/ini"; - rev = "06f5f3d67269ccec1fe5fe4134ba6e982984f7f5"; - sha256 = "0fx123601aiqqn0yr9vj6qp1bh8gp240w4qdm76irs73q8dxlk7a"; - }; - } - { - goPackagePath = "github.com/godbus/dbus"; - fetch = { - type = "git"; - url = "https://github.com/godbus/dbus"; - rev = "2ff6f7ffd60f0f2410b3105864bdd12c7894f844"; - sha256 = "1c107893nbdfc297i9y0smljmqs167mw26i24509qd09dmvr998y"; - }; - } - { - goPackagePath = "github.com/gsterjov/go-libsecret"; - fetch = { - type = "git"; - url = "https://github.com/gsterjov/go-libsecret"; - rev = "a6f4afe4910cad8688db3e0e9b9ac92ad22d54e1"; - sha256 = "09zaiadnll83vs22ib89agg7anj0blw5fywvmckxllsgif6ak6v7"; - }; - } - { - goPackagePath = "github.com/headzoo/surf"; - fetch = { - type = "git"; - url = "https://github.com/headzoo/surf"; - rev = "a4a8c16c01dc47ef3a25326d21745806f3e6797a"; - sha256 = "1dzcp0wdh3qmm5s5hixk9vj2s2kcvkpbhjdwz7kh2crvnavdgwh6"; - }; - } - { - goPackagePath = "github.com/jmespath/go-jmespath"; - fetch = { - type = "git"; - url = "https://github.com/jmespath/go-jmespath"; - rev = "0b12d6b5"; - sha256 = "1vv6hph8j6xgv7gwl9vvhlsaaqsm22sxxqmgmldi4v11783pc1ld"; - }; - } - { - goPackagePath = "github.com/keybase/go-keychain"; - fetch = { - type = "git"; - url = "https://github.com/keybase/go-keychain"; - rev = "f1daa725cce4049b1715f1e97d6a51880e401e70"; - sha256 = "0wk2zc5f5i5mhdkbyzd60wzc64vybds6kxlmwc41k8mx6d1hxdm6"; - }; - } - { - goPackagePath = "github.com/mattn/go-colorable"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-colorable"; - rev = "167de6bfdfba052fa6b2d3664c8f5272e23c9072"; - sha256 = "1nwjmsppsjicr7anq8na6md7b1z84l9ppnlr045hhxjvbkqwalvx"; - }; - } - { - goPackagePath = "github.com/mattn/go-isatty"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-isatty"; - rev = "0360b2af4f38e8d38c7fce2a9f4e702702d73a39"; - sha256 = "06w45aqz2a6yrk25axbly2k5wmsccv8cspb94bfmz4izvw8h927n"; - }; - } - { - goPackagePath = "github.com/mgutz/ansi"; - fetch = { - type = "git"; - url = "https://github.com/mgutz/ansi"; - rev = "9520e82c474b0a04dd04f8a40959027271bab992"; - sha256 = "00bz22314j26736w1f0q4jy9d9dfaml17vn890n5zqy3cmvmww1j"; - }; - } - { - goPackagePath = "github.com/mitchellh/go-homedir"; - fetch = { - type = "git"; - url = "https://github.com/mitchellh/go-homedir"; - rev = "3864e76763d94a6df2f9960b16a20a33da9f9a66"; - sha256 = "1n8vya16l60i5jms43yb8fzdgwvqa2q926p5wkg3lbrk8pxy1nv0"; - }; - } - { - goPackagePath = "github.com/pkg/errors"; - fetch = { - type = "git"; - url = "https://github.com/pkg/errors"; - rev = "645ef00459ed84a119197bfb8d8205042c6df63d"; - sha256 = "001i6n71ghp2l6kdl3qq1v2vmghcz3kicv9a5wgcihrzigm75pp5"; - }; - } - { - goPackagePath = "github.com/pmezard/go-difflib"; - fetch = { - type = "git"; - url = "https://github.com/pmezard/go-difflib"; - rev = "792786c7400a136282c1664665ae0a8db921c6c2"; - sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw"; - }; - } - { - goPackagePath = "github.com/robertkrimen/otto"; - fetch = { - type = "git"; - url = "https://github.com/robertkrimen/otto"; - rev = "15f95af6e78dcd2030d8195a138bd88d4f403546"; - sha256 = "07j7l340lmqwpfscwyb8llk3k37flvs20a4a8vzc85f16xyd9npf"; - }; - } - { - goPackagePath = "github.com/sirupsen/logrus"; - fetch = { - type = "git"; - url = "https://github.com/sirupsen/logrus"; - rev = "c155da19408a8799da419ed3eeb0cb5db0ad5dbc"; - sha256 = "0g5z7al7kky11ai2dhac6gkp3b5pxsvx72yj3xg4wg3265gbn7yz"; - }; - } - { - goPackagePath = "github.com/stretchr/objx"; - fetch = { - type = "git"; - url = "https://github.com/stretchr/objx"; - rev = "477a77ecc69700c7cdeb1fa9e129548e1c1c393c"; - sha256 = "0iph0qmpyqg4kwv8jsx6a56a7hhqq8swrazv40ycxk9rzr0s8yls"; - }; - } - { - goPackagePath = "github.com/stretchr/testify"; - fetch = { - type = "git"; - url = "https://github.com/stretchr/testify"; - rev = "f35b8ab0b5a2cef36673838d662e249dd9c94686"; - sha256 = "0dlszlshlxbmmfxj5hlwgv3r22x0y1af45gn1vd198nvvs3pnvfs"; - }; - } - { - goPackagePath = "github.com/tidwall/gjson"; - fetch = { - type = "git"; - url = "https://github.com/tidwall/gjson"; - rev = "afaeb9562041a8018c74e006551143666aed08bf"; - sha256 = "1hysk947mrlpaqjq7mab0nnm190fwvfdifaa2cq3sbwfrzx6h1c8"; - }; - } - { - goPackagePath = "github.com/tidwall/match"; - fetch = { - type = "git"; - url = "https://github.com/tidwall/match"; - rev = "1731857f09b1f38450e2c12409748407822dc6be"; - sha256 = "14nv96h0mjki5q685qx8y331h4yga6hlfh3z9nz6acvnv284q578"; - }; - } - { - goPackagePath = "golang.org/x/crypto"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/crypto"; - rev = "a8fb68e7206f8c78be19b432c58eb52a6aa34462"; - sha256 = "1svphap40hy5srcqnb0l207r6wfm9hf0f3fcaq124qp4m91s6vlf"; - }; - } - { - goPackagePath = "golang.org/x/net"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/net"; - rev = "db08ff08e8622530d9ed3a0e8ac279f6d4c02196"; - sha256 = "1f6q8kbijnrfy6wjqxrzgjf38ippckc5w34lhqsjs7kq045aar9a"; - }; - } - { - goPackagePath = "golang.org/x/sys"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/sys"; - rev = "8014b7b116a67fea23fbb82cd834c9ad656ea44b"; - sha256 = "1ld5nr0zqjgkny7d5biix9hbnxnlzxxa5nspnal2q2c7wnai8apa"; - }; - } - { - goPackagePath = "golang.org/x/text"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/text"; - rev = "f21a4dfb5e38f5895301dc265a8def02365cc3d0"; - sha256 = "0r6x6zjzhr8ksqlpiwm5gdd7s209kwk5p4lw54xjvz10cs3qlq19"; - }; - } - { - goPackagePath = "gopkg.in/AlecAivazis/survey.v1"; - fetch = { - type = "git"; - url = "https://github.com/AlecAivazis/survey"; - rev = "e752db451e07e09c7d7dc8cada807a44bdb0fd47"; - sha256 = "00fhmsaymrf86pg246cqxvfrivgfkyg3i0aixsp3sn15hg3i0vlq"; - }; - } - { - goPackagePath = "gopkg.in/ini.v1"; - fetch = { - type = "git"; - url = "https://github.com/go-ini/ini"; - rev = "06f5f3d67269ccec1fe5fe4134ba6e982984f7f5"; - sha256 = "0fx123601aiqqn0yr9vj6qp1bh8gp240w4qdm76irs73q8dxlk7a"; - }; - } - { - goPackagePath = "gopkg.in/sourcemap.v1"; - fetch = { - type = "git"; - url = "https://github.com/go-sourcemap/sourcemap"; - rev = "6e83acea0053641eff084973fee085f0c193c61a"; - sha256 = "08rf2dl13hbnm3fq2cm0nnsspy9fhf922ln23cz5463cv7h62as4"; - }; - } -] \ No newline at end of file diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 7a22680c5fd..2feb885ba5d 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -791,6 +791,9 @@ in bitwarden_rs = callPackage ../tools/security/bitwarden_rs { inherit (darwin.apple_sdk.frameworks) Security CoreServices; }; + bitwarden_rs-sqlite = bitwarden_rs; + bitwarden_rs-mysql = bitwarden_rs.override { dbBackend = "mysql"; }; + bitwarden_rs-postgresql = bitwarden_rs.override { dbBackend = "postgresql"; }; bitwarden_rs-vault = callPackage ../tools/security/bitwarden_rs/vault.nix { }; @@ -3432,9 +3435,7 @@ in fusuma = callPackage ../tools/inputmethods/fusuma {}; - fdbPackages = dontRecurseIntoAttrs (callPackage ../servers/foundationdb { - stdenv49 = gcc49Stdenv; - }); + fdbPackages = dontRecurseIntoAttrs (callPackage ../servers/foundationdb { }); inherit (fdbPackages) foundationdb51 @@ -3620,10 +3621,6 @@ in gnash = callPackage ../misc/gnash { }; - gnaural = callPackage ../applications/audio/gnaural { - stdenv = gcc49Stdenv; - }; - gnirehtet = callPackage ../tools/networking/gnirehtet { }; gnome-builder = callPackage ../applications/editors/gnome-builder { }; @@ -5868,6 +5865,8 @@ in pre-commit = gitAndTools.pre-commit; + pretty-simple = callPackage ../development/tools/pretty-simple { }; + prettyping = callPackage ../tools/networking/prettyping { }; prey-bash-client = callPackage ../tools/security/prey { }; @@ -7769,7 +7768,6 @@ in avian = callPackage ../development/compilers/avian { inherit (darwin.apple_sdk.frameworks) CoreServices Foundation; - stdenv = if stdenv.cc.isGNU then gcc49Stdenv else stdenv; }; bigloo = callPackage ../development/compilers/bigloo { }; @@ -7892,6 +7890,7 @@ in crystal_0_29 crystal_0_30 crystal_0_31 + crystal_0_32 crystal crystal2nix; @@ -7949,7 +7948,6 @@ in }; gcc49Stdenv = overrideCC gccStdenv buildPackages.gcc49; - gcc5Stdenv = overrideCC gccStdenv buildPackages.gcc5; gcc6Stdenv = overrideCC gccStdenv buildPackages.gcc6; gcc7Stdenv = overrideCC gccStdenv buildPackages.gcc7; gcc8Stdenv = overrideCC gccStdenv buildPackages.gcc8; @@ -8067,18 +8065,6 @@ in cloog = if !stdenv.isDarwin then cloog_0_18_0 else null; })); - gcc5 = lowPrio (wrapCC (callPackage ../development/compilers/gcc/5 { - inherit noSysDirs; - - # PGO seems to speed up compilation by gcc by ~10%, see #445 discussion - profiledCompiler = with stdenv; (!isDarwin && (isi686 || isx86_64)); - - libcCross = if stdenv.targetPlatform != stdenv.buildPlatform then libcCross else null; - threadsCross = if stdenv.targetPlatform != stdenv.buildPlatform then threadsCross else null; - - isl = if !stdenv.isDarwin then isl_0_14 else null; - })); - gcc6 = lowPrio (wrapCC (callPackage ../development/compilers/gcc/6 { inherit noSysDirs; @@ -8157,14 +8143,6 @@ in profiledCompiler = false; }); - gfortran5 = wrapCC (gcc5.cc.override { - name = "gfortran"; - langFortran = true; - langCC = false; - langC = false; - profiledCompiler = false; - }); - gfortran6 = wrapCC (gcc6.cc.override { name = "gfortran"; langFortran = true; @@ -8752,9 +8730,7 @@ in pforth = callPackage ../development/compilers/pforth {}; - picat = callPackage ../development/compilers/picat { - stdenv = gcc49Stdenv; - }; + picat = callPackage ../development/compilers/picat { }; ponyc = callPackage ../development/compilers/ponyc { llvm = llvm_7; @@ -9093,7 +9069,7 @@ in inherit (beam.interpreters) erlang erlangR18 erlangR19 erlangR20 erlangR21 erlangR22 erlang_odbc erlang_javac erlang_odbc_javac erlang_nox erlang_basho_R16B02 - elixir elixir_1_9 elixir_1_8 elixir_1_7 elixir_1_6 elixir_1_5 + elixir elixir_1_10 elixir_1_9 elixir_1_8 elixir_1_7 elixir_1_6 lfe lfe_1_2; inherit (beam.packages.erlang) @@ -9750,10 +9726,6 @@ in avrdude = callPackage ../development/tools/misc/avrdude { }; - avarice = callPackage ../development/tools/misc/avarice { - gcc = gcc49; - }; - babeltrace = callPackage ../development/tools/misc/babeltrace { }; bam = callPackage ../development/tools/build-managers/bam {}; @@ -10235,6 +10207,8 @@ in guile = guile_2_0; }; + hadolint = haskell.lib.justStaticExecutables haskellPackages.hadolint; + hcloud = callPackage ../development/tools/hcloud { }; help2man = callPackage ../development/tools/misc/help2man { }; @@ -14561,13 +14535,6 @@ in gnutls = gnutls; }); - # 3.14 is needed for R V8 module in ../development/r-modules/default.nix - v8_3_14 = callPackage ../development/libraries/v8/3.14.nix { - inherit (python2Packages) python gyp; - cctools = darwin.cctools; - stdenv = gcc5Stdenv; - }; - v8_5_x = callPackage ../development/libraries/v8/5_x.nix ({ inherit (python2Packages) python gyp; icu = icu58; # v8-5.4.232 fails against icu4c-59.1 @@ -15269,8 +15236,8 @@ in fingerd_bsd = callPackage ../servers/fingerd/bsd-fingerd { }; - firebird = callPackage ../servers/firebird { icu = null; stdenv = gcc5Stdenv; }; - firebirdSuper = firebird.override { icu = icu58; superServer = true; stdenv = gcc5Stdenv; }; + firebird = callPackage ../servers/firebird { icu = null; /*stdenv = gcc5Stdenv;*/ }; + firebirdSuper = firebird.override { icu = icu58; superServer = true; /*stdenv = gcc5Stdenv;*/ }; frab = callPackage ../servers/web-apps/frab { }; @@ -15300,6 +15267,10 @@ in grafana_reporter = callPackage ../servers/monitoring/grafana-reporter { }; + gobetween = callPackage ../servers/gobetween { + buildGoModule = buildGo112Module; + }; + h2o = callPackage ../servers/http/h2o { }; haka = callPackage ../tools/security/haka { }; @@ -15916,6 +15887,8 @@ in unifiStable; unifi = unifiStable; + victoriametrics = callPackage ../servers/nosql/victoriametrics { }; + virtlyst = libsForQt5.callPackage ../servers/web-apps/virtlyst { }; virtuoso6 = callPackage ../servers/sql/virtuoso/6.x.nix { @@ -16457,6 +16430,14 @@ in ]; }; + linux_5_5 = callPackage ../os-specific/linux/kernel/linux-5.5.nix { + kernelPatches = [ + kernelPatches.bridge_stp_helper + kernelPatches.request_key_helper + kernelPatches.export_kernel_fpu_functions."5.3" + ]; + }; + linux_testing = callPackage ../os-specific/linux/kernel/linux-testing.nix { kernelPatches = [ kernelPatches.bridge_stp_helper @@ -16662,7 +16643,7 @@ in linux = linuxPackages.kernel; # Update this when adding the newest kernel major version! - linuxPackages_latest = linuxPackages_5_4; + linuxPackages_latest = linuxPackages_5_5; linux_latest = linuxPackages_latest.kernel; # Build the kernel modules for the some of the kernels. @@ -16676,6 +16657,7 @@ in linuxPackages_4_14 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_14); linuxPackages_4_19 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_19); linuxPackages_5_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_4); + linuxPackages_5_5 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_5_5); # When adding to this list: # - Update linuxPackages_latest to the latest version @@ -17279,6 +17261,8 @@ in zd1211fw = callPackage ../os-specific/linux/firmware/zd1211 { }; + zenmonitor = callPackage ../os-specific/linux/zenmonitor { }; + inherit (callPackage ../os-specific/linux/zfs { configFile = "user"; }) zfsStable zfsUnstable; @@ -18087,7 +18071,6 @@ in afterstep = callPackage ../applications/window-managers/afterstep { fltk = fltk13; gtk = gtk2; - stdenv = gcc49Stdenv; }; agedu = callPackage ../tools/misc/agedu { }; @@ -18372,7 +18355,6 @@ in calf = callPackage ../applications/audio/calf { inherit (gnome2) libglade; - stdenv = gcc5Stdenv; }; calcurse = callPackage ../applications/misc/calcurse { }; @@ -23152,6 +23134,11 @@ in mindustry = callPackage ../games/mindustry { }; + mindustry-server = callPackage ../games/mindustry { + enableClient = false; + enableServer = true; + }; + minecraft = callPackage ../games/minecraft { }; minecraft-server = callPackage ../games/minecraft-server { }; @@ -23828,7 +23815,7 @@ in aragorn = callPackage ../applications/science/biology/aragorn { }; archimedes = callPackage ../applications/science/electronics/archimedes { - stdenv = gcc49Stdenv; + stdenv = gcc6Stdenv; }; bayescan = callPackage ../applications/science/biology/bayescan { }; @@ -24766,6 +24753,8 @@ in dumb = callPackage ../misc/dumb { }; + ecdsatool = callPackage ../tools/security/ecdsatool { }; + emulationstation = callPackage ../misc/emulators/emulationstation { }; electricsheep = callPackage ../misc/screensavers/electricsheep { }; @@ -24952,7 +24941,7 @@ in mupen64plus = callPackage ../misc/emulators/mupen64plus { }; - muse = callPackage ../applications/audio/muse { }; + muse = libsForQt5.callPackage ../applications/audio/muse { }; musly = callPackage ../applications/audio/musly { }; diff --git a/pkgs/top-level/beam-packages.nix b/pkgs/top-level/beam-packages.nix index 7496449c044..a2405107563 100644 --- a/pkgs/top-level/beam-packages.nix +++ b/pkgs/top-level/beam-packages.nix @@ -71,8 +71,8 @@ rec { # Other Beam languages. These are built with `beam.interpreters.erlang`. To # access for example elixir built with different version of Erlang, use - # `beam.packages.erlangR19.elixir`. - inherit (packages.erlang) elixir elixir_1_9 elixir_1_8 elixir_1_7 elixir_1_6 elixir_1_5; + # `beam.packages.erlangR22.elixir`. + inherit (packages.erlang) elixir elixir_1_10 elixir_1_9 elixir_1_8 elixir_1_7 elixir_1_6; inherit (packages.erlang) lfe lfe_1_2; }; @@ -83,7 +83,6 @@ rec { # Each field in this tuple represents all Beam packages in nixpkgs built with # appropriate Erlang/OTP version. packages = { - # Packages built with default Erlang version. erlang = packagesWith interpreters.erlang; erlangR18 = packagesWith interpreters.erlangR18; @@ -91,6 +90,5 @@ rec { erlangR20 = packagesWith interpreters.erlangR20; erlangR21 = packagesWith interpreters.erlangR21; erlangR22 = packagesWith interpreters.erlangR22; - }; } diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 18b014bff86..3a93212d0c1 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -1662,6 +1662,8 @@ in { asn1ate = callPackage ../development/python-modules/asn1ate { }; + atlassian-python-api = callPackage ../development/python-modules/atlassian-python-api { }; + atomiclong = callPackage ../development/python-modules/atomiclong { }; atomicwrites = callPackage ../development/python-modules/atomicwrites { }; @@ -3325,6 +3327,8 @@ in { djangorestframework-jwt = callPackage ../development/python-modules/djangorestframework-jwt { }; + djangorestframework-simplejwt = callPackage ../development/python-modules/djangorestframework-simplejwt { }; + django-raster = callPackage ../development/python-modules/django-raster { }; django_redis = callPackage ../development/python-modules/django_redis { }; diff --git a/pkgs/top-level/static.nix b/pkgs/top-level/static.nix index 3dd539e03a7..0de1db7d99b 100644 --- a/pkgs/top-level/static.nix +++ b/pkgs/top-level/static.nix @@ -88,7 +88,6 @@ self: super: let in { stdenv = foldl (flip id) super.stdenv staticAdapters; gcc49Stdenv = foldl (flip id) super.gcc49Stdenv staticAdapters; - gcc5Stdenv = foldl (flip id) super.gcc5Stdenv staticAdapters; gcc6Stdenv = foldl (flip id) super.gcc6Stdenv staticAdapters; gcc7Stdenv = foldl (flip id) super.gcc7Stdenv staticAdapters; gcc8Stdenv = foldl (flip id) super.gcc8Stdenv staticAdapters; |