Merge master into staging-next

39 files changed, 670 insertions, 109 deletions

diff --git a/pkgs/development/compilers/nextpnr/default.nix b/pkgs/development/compilers/nextpnr/default.nix
index dc8f750c567..5dfefa61220 100644
--- a/pkgs/development/compilers/nextpnr/default.nix
+++ b/pkgs/development/compilers/nextpnr/default.nix
@@ -14,14 +14,14 @@ let
 in
 with stdenv; mkDerivation rec {
   pname = "nextpnr";
-  version = "2020.07.08";
+  version = "2020.08.22";
 
   srcs = [
     (fetchFromGitHub {
       owner  = "YosysHQ";
       repo   = "nextpnr";
-      rev    = "3cafb16aa634d2bc369077d8d36760d23973a35b";
-      sha256 = "0z6q8f2f97jr037d51h097vck9jspidjn0pb5irlj0xdnb5si0js";
+      rev    = "c8ecb8341ca766e1e7565cc2b652b63eaba67508";
+      sha256 = "1cf9ad7w5x452qdc6m9c3in6v9yzip3n1as978lbdh76f5mc00fv";
       name   = "nextpnr";
     })
     (fetchFromGitHub {
diff --git a/pkgs/development/compilers/yosys/default.nix b/pkgs/development/compilers/yosys/default.nix
index 7d645da8b4b..c3185ca4e0e 100644
--- a/pkgs/development/compilers/yosys/default.nix
+++ b/pkgs/development/compilers/yosys/default.nix
@@ -16,13 +16,13 @@
 
 stdenv.mkDerivation rec {
   pname   = "yosys";
-  version = "2020.07.07";
+  version = "2020.08.22";
 
   src = fetchFromGitHub {
     owner  = "YosysHQ";
     repo   = "yosys";
-    rev    = "000fd08198487cd1d36e65e4470f4b0269c23a2b";
-    sha256 = "01s252vwh4g1f4y99nfrkpf6hgvh9k63nz8hvpmjza5z8x6zf4i1";
+    rev    = "12132b6850747aec99715fdfa3184fe3ebefa015";
+    sha256 = "1v6x1y2f3r8vi7pnkgx374rrv02xgmg9yg23f61n7d1v2rd6y5cc";
   };
 
   enableParallelBuilding = true;
diff --git a/pkgs/development/coq-modules/coqprime/default.nix b/pkgs/development/coq-modules/coqprime/default.nix
index a049fa94d41..0ead97ffbf0 100644
--- a/pkgs/development/coq-modules/coqprime/default.nix
+++ b/pkgs/development/coq-modules/coqprime/default.nix
@@ -6,6 +6,10 @@ let
           version = "8.8";
           sha256 = "075yjczk79pf1hd3lgdjiz84ilkzfxjh18lgzrhhqp7d3kz5lxp5";
         };
+        v_8_10 = {
+          version = "8.10";
+          sha256 = "0r9gnh5a5ykiiz5h1i8xnzgiydpwc4z9qhndxyya85xq0f910qaz";
+        };
     in
       {
         "8.7" = {
@@ -14,10 +18,8 @@ let
         };
         "8.8" = v_8_8;
         "8.9" = v_8_8;
-        "8.10" = {
-          version = "8.10";
-          sha256 = "0r9gnh5a5ykiiz5h1i8xnzgiydpwc4z9qhndxyya85xq0f910qaz";
-        };
+        "8.10" = v_8_10;
+        "8.11" = v_8_10;
       };
   param = params.${coq.coq-version};
 in
diff --git a/pkgs/development/interpreters/clojure/default.nix b/pkgs/development/interpreters/clojure/default.nix
index 7d0857f4e78..53cef387ae4 100644
--- a/pkgs/development/interpreters/clojure/default.nix
+++ b/pkgs/development/interpreters/clojure/default.nix
@@ -2,11 +2,11 @@
 
 stdenv.mkDerivation rec {
   pname = "clojure";
-  version = "1.10.1.590";
+  version = "1.10.1.645";
 
   src = fetchurl {
     url = "https://download.clojure.org/install/clojure-tools-${version}.tar.gz";
-    sha256 = "18x8xkxsqwnv3k1mf42ylfv7zzjllm7yiagq16b2gkq62j5sm1k7";
+    sha256 = "1z6a9an8ls992y4japmzdxay7c5d2z9s2q1xl4g615r23jwpcsf9";
   };
 
   nativeBuildInputs = [
@@ -23,6 +23,7 @@ stdenv.mkDerivation rec {
       cp clojure-tools-${version}.jar $out/libexec
       cp example-deps.edn $out
       cp deps.edn $out
+      cp clj_exec.clj $out
 
       substituteInPlace clojure --replace PREFIX $out
 
diff --git a/pkgs/development/interpreters/groovy/default.nix b/pkgs/development/interpreters/groovy/default.nix
index 1572f5e4be2..97e997bdd69 100644
--- a/pkgs/development/interpreters/groovy/default.nix
+++ b/pkgs/development/interpreters/groovy/default.nix
@@ -4,11 +4,11 @@
 
 stdenv.mkDerivation rec {
   pname = "groovy";
-  version = "3.0.2";
+  version = "3.0.3";
 
   src = fetchurl {
     url = "http://dl.bintray.com/groovy/maven/apache-groovy-binary-${version}.zip";
-    sha256 = "1ddw3fqrmwh4w6z6xgck4jhmq33rwgbmpjw07g12ri1vgw4xks9w";
+    sha256 = "0xdm70b61pdj8z3g08az16y9b6cpz5hv7iwvwfyfyxrjdi47h419";
   };
 
   buildInputs = [ unzip makeWrapper ];
diff --git a/pkgs/development/interpreters/guile/2.0.nix b/pkgs/development/interpreters/guile/2.0.nix
index b5b83e18025..5b26b38dbd4 100644
--- a/pkgs/development/interpreters/guile/2.0.nix
+++ b/pkgs/development/interpreters/guile/2.0.nix
@@ -59,7 +59,7 @@
   # "libgcc_s.so.1 must be installed for pthread_cancel to work".
 
   # don't have "libgcc_s.so.1" on darwin
-  LDFLAGS = stdenv.lib.optionalString (!stdenv.isDarwin) "-lgcc_s";
+  LDFLAGS = stdenv.lib.optionalString (!stdenv.isDarwin && !stdenv.hostPlatform.isMusl) "-lgcc_s";
 
   configureFlags = [ "--with-libreadline-prefix" ]
     ++ stdenv.lib.optionals stdenv.isSunOS [
diff --git a/pkgs/development/libraries/libguestfs/default.nix b/pkgs/development/libraries/libguestfs/default.nix
index 411ae0a3316..234e1164893 100644
--- a/pkgs/development/libraries/libguestfs/default.nix
+++ b/pkgs/development/libraries/libguestfs/default.nix
@@ -1,6 +1,6 @@
 { stdenv, fetchurl, pkgconfig, autoreconfHook, makeWrapper
 , ncurses, cpio, gperf, cdrkit, flex, bison, qemu, pcre, augeas, libxml2
-, acl, libcap, libcap_ng, libconfig, systemd, fuse, yajl, libvirt, hivex
+, acl, libcap, libcap_ng, libconfig, systemd, fuse, yajl, libvirt, hivex, db
 , gmp, readline, file, numactl, xen, libapparmor, jansson
 , getopt, perlPackages, ocamlPackages
 , appliance ? null
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
   buildInputs = [
     ncurses cpio gperf jansson
     cdrkit flex bison qemu pcre augeas libxml2 acl libcap libcap_ng libconfig
-    systemd fuse yajl libvirt gmp readline file hivex
+    systemd fuse yajl libvirt gmp readline file hivex db
     numactl xen libapparmor getopt perlPackages.ModuleBuild
   ] ++ (with perlPackages; [ perl libintl_perl GetoptLong SysVirt ])
     ++ (with ocamlPackages; [ ocaml findlib ocamlbuild ocaml_libvirt gettext-stub ounit ])
diff --git a/pkgs/development/libraries/oneDNN/default.nix b/pkgs/development/libraries/oneDNN/default.nix
index b2beaee0bc9..1fb0f03d305 100644
--- a/pkgs/development/libraries/oneDNN/default.nix
+++ b/pkgs/development/libraries/oneDNN/default.nix
@@ -5,13 +5,13 @@
 # https://github.com/oneapi-src/oneDNN#oneapi-deep-neural-network-library-onednn
 stdenv.mkDerivation rec {
   pname = "oneDNN";
-  version = "1.6";
+  version = "1.6.1";
 
   src = fetchFromGitHub {
     owner = "oneapi-src";
     repo = "oneDNN";
     rev = "v${version}";
-    sha256 = "0w2rgr3zgk7a3cql12dpddyhz2isyqqaks4vm8p45y426pd5m64b";
+    sha256 = "1rdq2rb4f9xbk2a07fpqgvd9mx1r5gwpm0jr8rra815bzddam8zh";
   };
 
   outputs = [ "out" "dev" "doc" ];
diff --git a/pkgs/development/libraries/openxr-loader/default.nix b/pkgs/development/libraries/openxr-loader/default.nix
index 6c5f2af3a52..e03752872f9 100644
--- a/pkgs/development/libraries/openxr-loader/default.nix
+++ b/pkgs/development/libraries/openxr-loader/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "openxr-loader";
-  version = "1.0.10";
+  version = "1.0.11";
 
   src = fetchFromGitHub {
     owner = "KhronosGroup";
     repo = "OpenXR-SDK-Source";
     rev = "release-${version}";
-    sha256 = "1igxyji2ab3gki1hlndvws1b2868mk1n3c4c3y5z0h3g713zw9ap";
+    sha256 = "0f3x5h0hdjiqgjf5mzzlprbhrbyabxllrjmlzgc9fv5rgqyyphj5";
   };
 
   nativeBuildInputs = [ cmake python3 ];
diff --git a/pkgs/development/libraries/science/math/magma/default.nix b/pkgs/development/libraries/science/math/magma/default.nix
index dbe162c60b3..38700c963bf 100644
--- a/pkgs/development/libraries/science/math/magma/default.nix
+++ b/pkgs/development/libraries/science/math/magma/default.nix
@@ -1,19 +1,21 @@
-{ stdenv, fetchurl, cmake, gfortran, cudatoolkit, libpthreadstubs, lapack, blas }:
+{ stdenv, fetchurl, cmake, gfortran, ninja, cudatoolkit, libpthreadstubs, lapack, blas }:
 
 with stdenv.lib;
 
-let version = "2.5.0";
+let version = "2.5.3";
 
 in stdenv.mkDerivation {
   pname = "magma";
   inherit version;
   src = fetchurl {
     url = "https://icl.cs.utk.edu/projectsfiles/magma/downloads/magma-${version}.tar.gz";
-    sha256 = "0czspk93cv1fy37zyrrc9k306q4yzfxkhy1y4lj937dx8rz5rm2g";
+    sha256 = "1xjy3irdx0w1zyhvn4x47zni5fwsh6z97xd4yqldz8zrm5lx40n6";
     name = "magma-${version}.tar.gz";
   };
 
-  buildInputs = [ gfortran cudatoolkit libpthreadstubs cmake lapack blas ];
+  nativeBuildInputs = [ gfortran cmake ninja ];
+
+  buildInputs = [ cudatoolkit libpthreadstubs lapack blas ];
 
   doCheck = false;
 
@@ -32,7 +34,7 @@ in stdenv.mkDerivation {
     mkdir -p $out/lib/pkgconfig
     cp -a ../include/*.h $out/include
     #cp -a sparse-iter/include/*.h $out/include
-    cp -a lib/*.a $out/lib
+    cp -a lib/*.so $out/lib
     cat ../lib/pkgconfig/magma.pc.in                   | \
     sed -e s:@INSTALL_PREFIX@:"$out":          | \
     sed -e s:@CFLAGS@:"-I$out/include":    | \
diff --git a/pkgs/development/libraries/tk/generic.nix b/pkgs/development/libraries/tk/generic.nix
index 745be0be922..1cbf4026cb8 100644
--- a/pkgs/development/libraries/tk/generic.nix
+++ b/pkgs/development/libraries/tk/generic.nix
@@ -19,7 +19,7 @@ stdenv.mkDerivation {
   postInstall = ''
     ln -s $out/bin/wish* $out/bin/wish
     cp ../{unix,generic}/*.h $out/include
-    ln -s $out/lib/libtk${tcl.release}.so $out/lib/libtk.so
+    ln -s $out/lib/libtk${tcl.release}${stdenv.hostPlatform.extensions.sharedLibrary} $out/lib/libtk${stdenv.hostPlatform.extensions.sharedLibrary}
   ''
   + stdenv.lib.optionalString (stdenv.isDarwin) ''
     cp ../macosx/*.h $out/include
diff --git a/pkgs/development/libraries/utf8proc/default.nix b/pkgs/development/libraries/utf8proc/default.nix
index 00c09179f1f..e08aea2e1ee 100644
--- a/pkgs/development/libraries/utf8proc/default.nix
+++ b/pkgs/development/libraries/utf8proc/default.nix
@@ -17,6 +17,12 @@ stdenv.mkDerivation rec {
     "-DBUILD_SHARED_LIBS=ON"
   ];
 
+  # the pkg-config file is not created in the cmake installation
+  # process, so we use the Makefile and install it manually
+  # see https://github.com/JuliaStrings/utf8proc/issues/198
+  preConfigure = "make libutf8proc.pc prefix=$out";
+  postInstall = "install -Dm644 ../libutf8proc.pc -t $out/lib/pkgconfig/";
+
   meta = with stdenv.lib; {
     description = "A clean C library for processing UTF-8 Unicode data";
     homepage = "https://juliastrings.github.io/utf8proc/";
diff --git a/pkgs/development/ocaml-modules/containers/data.nix b/pkgs/development/ocaml-modules/containers/data.nix
new file mode 100644
index 00000000000..7d15d7d3c64
--- /dev/null
+++ b/pkgs/development/ocaml-modules/containers/data.nix
@@ -0,0 +1,18 @@
+{ buildDunePackage, containers
+, gen, iter, mdx, ounit, qcheck
+}:
+
+buildDunePackage {
+  pname = "containers-data";
+
+  inherit (containers) src version;
+
+  doCheck = true;
+  checkInputs = [ gen iter mdx.bin ounit qcheck ];
+
+  propagatedBuildInputs = [ containers ];
+
+  meta = containers.meta // {
+    description = "A set of advanced datatypes for containers";
+  };
+}
diff --git a/pkgs/development/ocaml-modules/containers/default.nix b/pkgs/development/ocaml-modules/containers/default.nix
index 16bad5a5ec4..970122dd79f 100644
--- a/pkgs/development/ocaml-modules/containers/default.nix
+++ b/pkgs/development/ocaml-modules/containers/default.nix
@@ -1,24 +1,22 @@
 { lib, fetchFromGitHub, buildDunePackage, ocaml
-, iter, result, uchar
-, gen, mdx, ounit, qcheck, uutf
+, seq
+, gen, iter, ounit, qcheck, uutf
 }:
 
 buildDunePackage rec {
-  version = "2.7";
+  version = "3.0";
   pname = "containers";
 
   src = fetchFromGitHub {
     owner = "c-cube";
     repo = "ocaml-containers";
     rev = "v${version}";
-    sha256 = "1nsxfgn1g1vpqihb9gd6gsab0bcm70nf9z84cp441c8wsc57hi6a";
+    sha256 = "0c75d5csgc68qqbsdz4279nlin111zrjbg4d47k32ska28myvpqn";
   };
 
-  buildInputs = [ iter ];
+  propagatedBuildInputs = [ seq ];
 
-  checkInputs = lib.optionals doCheck [ gen mdx.bin ounit qcheck uutf ];
-
-  propagatedBuildInputs = [ result uchar ];
+  checkInputs = [ gen iter ounit qcheck uutf ];
 
   doCheck = true;
 
diff --git a/pkgs/development/ocaml-modules/dune-action-plugin/default.nix b/pkgs/development/ocaml-modules/dune-action-plugin/default.nix
new file mode 100644
index 00000000000..fcb93aac799
--- /dev/null
+++ b/pkgs/development/ocaml-modules/dune-action-plugin/default.nix
@@ -0,0 +1,19 @@
+{ lib, buildDunePackage, dune_2, dune-glob, dune-private-libs }:
+
+buildDunePackage rec {
+  pname = "dune-action-plugin";
+  inherit (dune_2) src version;
+
+  useDune2 = true;
+
+  dontAddPrefix = true;
+
+  propagatedBuildInputs = [ dune-glob dune-private-libs ];
+
+  meta = with lib; {
+    inherit (dune_2.meta) homepage;
+    description = "API for writing dynamic Dune actions";
+    maintainers = [ maintainers.marsam ];
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/development/ocaml-modules/dune-glob/default.nix b/pkgs/development/ocaml-modules/dune-glob/default.nix
new file mode 100644
index 00000000000..34b79068c11
--- /dev/null
+++ b/pkgs/development/ocaml-modules/dune-glob/default.nix
@@ -0,0 +1,19 @@
+{ lib, buildDunePackage, dune_2, dune-private-libs }:
+
+buildDunePackage rec {
+  pname = "dune-glob";
+  inherit (dune_2) src version;
+
+  useDune2 = true;
+
+  dontAddPrefix = true;
+
+  propagatedBuildInputs = [ dune-private-libs ];
+
+  meta = with lib; {
+    inherit (dune_2.meta) homepage;
+    description = "Glob string matching language supported by dune";
+    maintainers = [ maintainers.marsam ];
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/development/ocaml-modules/dune-private-libs/default.nix b/pkgs/development/ocaml-modules/dune-private-libs/default.nix
index 6161bd1fe8e..9eb253f02e5 100644
--- a/pkgs/development/ocaml-modules/dune-private-libs/default.nix
+++ b/pkgs/development/ocaml-modules/dune-private-libs/default.nix
@@ -7,7 +7,7 @@ buildDunePackage rec {
 
   inherit (dune_2) src version;
 
-  minimumOCamlVersion = "4.07";
+  minimumOCamlVersion = "4.08";
 
   dontAddPrefix = true;
 
diff --git a/pkgs/development/ocaml-modules/hidapi/default.nix b/pkgs/development/ocaml-modules/hidapi/default.nix
new file mode 100644
index 00000000000..cd95b34fa2b
--- /dev/null
+++ b/pkgs/development/ocaml-modules/hidapi/default.nix
@@ -0,0 +1,27 @@
+{ pkgs, lib, fetchurl, buildDunePackage, pkg-config
+, bigstring,
+}:
+
+buildDunePackage rec {
+  pname = "hidapi";
+  version = "1.1.1";
+
+  src = fetchurl {
+    url = "https://github.com/vbmithr/ocaml-hidapi/releases/download/${version}/${pname}-${version}.tbz";
+    sha256 = "1j7rd7ajrzla76r3sxljx6fb18f4f4s3jd7vhv59l2ilxyxycai2";
+  };
+
+  minimumOCamlVersion = "4.03";
+
+  buildInputs = [ pkgs.hidapi pkg-config ];
+  propagatedBuildInputs = [ bigstring ];
+
+  doCheck = true;
+
+  meta = with lib; {
+    homepage = https://github.com/vbmithr/ocaml-hidapi;
+    description = "Bindings to Signal11's hidapi library";
+    license = licenses.isc;
+    maintainers = [ maintainers.alexfmpe ];
+  };
+}
diff --git a/pkgs/development/ocaml-modules/ocamlgraph/default.nix b/pkgs/development/ocaml-modules/ocamlgraph/default.nix
index d2a94112eb3..df684f166e1 100644
--- a/pkgs/development/ocaml-modules/ocamlgraph/default.nix
+++ b/pkgs/development/ocaml-modules/ocamlgraph/default.nix
@@ -1,4 +1,7 @@
-{stdenv, fetchurl, ocaml, findlib, lablgtk ? null}:
+{ stdenv, fetchurl, ocaml, findlib
+, gtkSupport ? true
+, lablgtk
+}:
 
 stdenv.mkDerivation rec {
   pname = "ocamlgraph";
@@ -9,22 +12,19 @@ stdenv.mkDerivation rec {
     sha256 = "0m9g16wrrr86gw4fz2fazrh8nkqms0n863w7ndcvrmyafgxvxsnr";
   };
 
-  buildInputs = [ ocaml findlib lablgtk ];
-
-  patches = ./destdir.patch;
-
-  postPatch = ''
-    sed -i 's@$(DESTDIR)$(OCAMLLIB)/ocamlgraph@$(DESTDIR)/lib/ocaml/${ocaml.version}/site-lib/ocamlgraph@' Makefile.in
-    sed -i 's@OCAMLFINDDEST := -destdir $(DESTDIR)@@' Makefile.in
-    ${stdenv.lib.optionalString (lablgtk != null)
-      "sed -i 's@+lablgtk2@${lablgtk}/lib/ocaml/${ocaml.version}/site-lib/lablgtk2 -I ${lablgtk}/lib/ocaml/${ocaml.version}/site-lib/stublibs@' configure Makefile.in editor/Makefile"}
-  '';
+  buildInputs = [ ocaml findlib ]
+  ++ stdenv.lib.optional gtkSupport lablgtk
+  ;
 
   createFindlibDestdir = true;
 
-  buildPhase = ''
-    make all
-    make install-findlib
+  buildFlags =  [ "all" ];
+  installTargets = [ "install-findlib" ];
+
+  postInstall = stdenv.lib.optionalString gtkSupport ''
+    mkdir -p $out/bin
+    cp dgraph/dgraph.opt $out/bin/graph-viewer
+    cp editor/editor.opt $out/bin/graph-editor
   '';
 
   meta = {
diff --git a/pkgs/development/ocaml-modules/ocamlgraph/destdir.patch b/pkgs/development/ocaml-modules/ocamlgraph/destdir.patch
deleted file mode 100644
index 38fca1c491f..00000000000
--- a/pkgs/development/ocaml-modules/ocamlgraph/destdir.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff -Naur -x '*~' ocamlgraph-1.8.1/Makefile.in ocamlgraph-1.8.1-new//Makefile.in
---- ocamlgraph-1.8.1/Makefile.in	2011-10-17 09:57:03.000000000 -0430
-+++ ocamlgraph-1.8.1-new//Makefile.in	2011-11-24 13:01:22.626004819 -0430
-@@ -16,8 +16,8 @@
- ##########################################################################
- 
- # Where to install the binaries
--DESTDIR	=
- prefix	=@prefix@
-+DESTDIR=$(prefix)
- exec_prefix=@exec_prefix@
- datarootdir=@datarootdir@
- BINDIR	=$(DESTDIR)@bindir@
diff --git a/pkgs/development/python-modules/awkward1/default.nix b/pkgs/development/python-modules/awkward1/default.nix
index 635ffac2638..1e4958f37e6 100644
--- a/pkgs/development/python-modules/awkward1/default.nix
+++ b/pkgs/development/python-modules/awkward1/default.nix
@@ -10,11 +10,11 @@
 
 buildPythonPackage rec {
   pname = "awkward1";
-  version = "0.2.27";
+  version = "0.2.33";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c868437aabb2e95efbc522c43d47cac42e1c61904c7ddbebf2f41c6b63bb9c6f";
+    sha256 = "bf3de210d0a88fb14a97c296f54ed2d5b686a785bb5fd7a31277f22b8daa9513";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/python-modules/gspread/default.nix b/pkgs/development/python-modules/gspread/default.nix
index 5c9c644abd3..5fd73541dd4 100644
--- a/pkgs/development/python-modules/gspread/default.nix
+++ b/pkgs/development/python-modules/gspread/default.nix
@@ -3,6 +3,7 @@
 , fetchPypi
 , requests
 , google_auth
+, google-auth-oauthlib
 }:
 
 buildPythonPackage rec {
@@ -14,14 +15,12 @@ buildPythonPackage rec {
     sha256 = "e04f1a6267b3929fc1600424c5ec83906d439672cafdd61a9d5b916a139f841c";
   };
 
-  propagatedBuildInputs = [ requests ];
+  propagatedBuildInputs = [ requests google_auth google-auth-oauthlib ];
 
   meta = with stdenv.lib; {
     description = "Google Spreadsheets client library";
     homepage = "https://github.com/burnash/gspread";
     license = licenses.mit;
-    # missing multiple google libraries
-    broken = true; # 2020-08-15
   };
 
   # No tests included
diff --git a/pkgs/development/python-modules/pandas/default.nix b/pkgs/development/python-modules/pandas/default.nix
index cebb7c2b938..7b246a38cb9 100644
--- a/pkgs/development/python-modules/pandas/default.nix
+++ b/pkgs/development/python-modules/pandas/default.nix
@@ -58,6 +58,10 @@ in buildPythonPackage rec {
     xlwt
   ];
 
+  # doesn't work with -Werror,-Wunused-command-line-argument
+  # https://github.com/NixOS/nixpkgs/issues/39687
+  hardeningDisable = optional stdenv.cc.isClang "strictoverflow";
+
   # For OSX, we need to add a dependency on libcxx, which provides
   # `complex.h` and other libraries that pandas depends on to build.
   postPatch = optionalString isDarwin ''
diff --git a/pkgs/development/python-modules/pelican/default.nix b/pkgs/development/python-modules/pelican/default.nix
index c7c1ced34f1..30d6546d570 100644
--- a/pkgs/development/python-modules/pelican/default.nix
+++ b/pkgs/development/python-modules/pelican/default.nix
@@ -1,18 +1,20 @@
-{ stdenv, buildPythonPackage, fetchFromGitHub
+{ stdenv, buildPythonPackage, fetchFromGitHub, isPy27
 , glibcLocales, git
 , mock, nose, markdown, lxml, typogrify
 , jinja2, pygments, docutils, pytz, unidecode, six, dateutil, feedgenerator
-, blinker, pillow, beautifulsoup4, markupsafe }:
+, blinker, pillow, beautifulsoup4, markupsafe, pandoc }:
 
 buildPythonPackage rec {
   pname = "pelican";
-  version = "4.2.0";
+  version = "4.5.0";
+
+  disabled = isPy27;
 
   src = fetchFromGitHub {
     owner = "getpelican";
     repo = "pelican";
     rev = version;
-    sha256 = "0w9nqdw2jmqc6kqwg4rh6irr5k6j7hk8axg6vgd137rs50v62yv5";
+    sha256 = "0p8p84fcpkr19d54dhxvldd8ijbg334wmrmkr99pnbrdl1gf64qi";
     # Remove unicode file names which leads to different checksums on HFS+
     # vs. other filesystems because of unicode normalisation.
     extraPostFetch = ''
@@ -24,15 +26,15 @@ buildPythonPackage rec {
 
   # Exclude custom locale test, which files were removed above to fix the source checksum
   checkPhase = ''
-    nosetests -sv --exclude=test_custom_locale_generation_works pelican
+    nosetests -s \
+      --exclude=test_custom_locale_generation_works \
+      --exclude=test_log_filter \
+      pelican
   '';
 
   buildInputs = [
     glibcLocales
-    # Note: Pelican has to adapt to a changed CLI of pandoc before enabling this
-    # again. Compare https://github.com/getpelican/pelican/pull/2252.
-    # Version 4.2.0 is incompatible with our current pandoc version.
-    # pandoc
+    pandoc
     git
     mock
     markdown
@@ -46,21 +48,16 @@ buildPythonPackage rec {
 
   checkInputs = [
     nose
+    pandoc
   ];
 
   postPatch= ''
     substituteInPlace pelican/tests/test_pelican.py \
       --replace "'git'" "'${git}/bin/git'"
-
-    # Markdown-3.1 changed footnote separator to colon
-    # https://github.com/getpelican/pelican/issues/2493#issuecomment-491723744
-    sed -i '/test_article_with_footnote/i\
-        @unittest.skip("")' pelican/tests/test_readers.py
   '';
 
   LC_ALL="en_US.UTF-8";
 
-
   # We only want to patch shebangs in /bin, and not those
   # of the project scripts that are created by Pelican.
   # See https://github.com/NixOS/nixpkgs/issues/30116
diff --git a/pkgs/development/python-modules/sabyenc3/default.nix b/pkgs/development/python-modules/sabyenc3/default.nix
new file mode 100644
index 00000000000..05b667fedc1
--- /dev/null
+++ b/pkgs/development/python-modules/sabyenc3/default.nix
@@ -0,0 +1,22 @@
+{ lib, fetchPypi, python3Packages }:
+
+python3Packages.buildPythonPackage rec {
+  pname = "sabyenc3";
+  version = "4.0.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0zfj1k4zij8ph8jwkq4d6i6axym8cil16yijxshqla5163d1031z";
+  };
+
+  # tests are not included in pypi distribution
+  doCheck = false;
+
+  meta = {
+    description = "yEnc Decoding for Python 3";
+    homepage = "https://github.com/sabnzbd/sabyenc/";
+    license = lib.licenses.lgpl3;
+    maintainers = [ lib.maintainers.lovek323 ];
+  };
+
+}
diff --git a/pkgs/development/python-modules/test-tube/default.nix b/pkgs/development/python-modules/test-tube/default.nix
new file mode 100644
index 00000000000..f0c26292c84
--- /dev/null
+++ b/pkgs/development/python-modules/test-tube/default.nix
@@ -0,0 +1,46 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, isPy27
+, pytestCheckHook
+, future
+, imageio
+, numpy
+, pandas
+, pytorch
+, tensorflow-tensorboard
+}:
+
+buildPythonPackage rec {
+  pname = "test-tube";
+  version = "0.7.5";
+
+  disabled = isPy27;
+
+  src = fetchFromGitHub {
+    owner = "williamFalcon";
+    repo = pname;
+    rev = version;
+    sha256 = "0zpvlp1ybp2dhgap8jsalpfdyg8ycjhlfi3xrdf5dqffqvh2yhp2";
+  };
+
+  checkInputs = [
+    pytestCheckHook
+  ];
+
+  propagatedBuildInputs = [
+    future
+    imageio
+    numpy
+    pandas
+    pytorch
+    tensorflow-tensorboard
+  ];
+
+  meta = with lib; {
+    homepage = "https://github.com/williamFalcon/test-tube";
+    description = "Framework-agnostic library to track and parallelize hyperparameter search in machine learning experiments";
+    license = licenses.mit;
+    maintainers = [ maintainers.tbenst ];
+  };
+}
diff --git a/pkgs/development/python-modules/userpath/default.nix b/pkgs/development/python-modules/userpath/default.nix
new file mode 100644
index 00000000000..8366a56158d
--- /dev/null
+++ b/pkgs/development/python-modules/userpath/default.nix
@@ -0,0 +1,30 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, click
+, distro
+}:
+
+buildPythonPackage rec {
+  pname = "userpath";
+  version = "1.4.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256="0mfjmvx286z1dmnrc7bm65x8gj8qrmkcyagl0vf5ywfq0bm48591";
+  };
+
+  propagatedBuildInputs = [ click distro ];
+
+  # test suite is difficult to emulate in sandbox due to shell manipulation
+  doCheck = false;
+
+  pythonImportsCheck = [ "click" "userpath" ];
+
+  meta = with lib; {
+    description = "Cross-platform tool for adding locations to the user PATH";
+    homepage = "https://github.com/ofek/userpath";
+    license = [ licenses.asl20 licenses.mit ];
+    maintainers = with maintainers; [ yevhenshymotiuk ];
+  };
+}
diff --git a/pkgs/development/tools/analysis/tflint/default.nix b/pkgs/development/tools/analysis/tflint/default.nix
index b4e66f507d1..b6834ea8232 100644
--- a/pkgs/development/tools/analysis/tflint/default.nix
+++ b/pkgs/development/tools/analysis/tflint/default.nix
@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "tflint";
-  version = "0.19.0";
+  version = "0.19.1";
 
   src = fetchFromGitHub {
     owner = "terraform-linters";
     repo = pname;
     rev = "v${version}";
-    sha256 = "14pgsx136ibaf1mqkwn8ibnn4g6q5xx0r7xbijj521v12m145i8g";
+    sha256 = "1nj36xxl8zg7wdc36lakzdyr9hk82qwkwrvrw19bqach697y57nf";
   };
 
   vendorSha256 = "0bzd58ry5k100mjgvl1mxz7aysm75s4vkilcykrqy1s5sc0h3ng5";
diff --git a/pkgs/development/tools/bazel-kazel/default.nix b/pkgs/development/tools/bazel-kazel/default.nix
index 62c5e6c9ef9..4ae2a3e68f9 100644
--- a/pkgs/development/tools/bazel-kazel/default.nix
+++ b/pkgs/development/tools/bazel-kazel/default.nix
@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "bazel-kazel";
-  version = "0.0.11";
+  version = "0.0.12";
 
   src = fetchFromGitHub {
     owner = "kubernetes";
     repo = "repo-infra";
     rev = "v${version}";
-    sha256 = "0fcm7gjsv70qxnwbgy2sgx7clyhlfnkvdxsjgcrkaf5xds8hpys7";
+    sha256 = "1mnyp116q54xy7flml4cdcsbczhyyqnpyn2pnqrzy49aahbhpn5z";
   };
 
   vendorSha256 = "1pzkjh4n9ai8yqi98bkdhicjdr2l8j3fckl5n90c2gdcwqyxvgkf";
diff --git a/pkgs/development/tools/cloudfoundry-cli/default.nix b/pkgs/development/tools/cloudfoundry-cli/default.nix
index 9d0c1ab92ff..642c42108aa 100644
--- a/pkgs/development/tools/cloudfoundry-cli/default.nix
+++ b/pkgs/development/tools/cloudfoundry-cli/default.nix
@@ -1,8 +1,8 @@
-{ stdenv, buildGoPackage, fetchFromGitHub, installShellFiles }:
+{ stdenv, buildGoPackage, fetchFromGitHub, fetchurl, installShellFiles }:
 
 buildGoPackage rec {
   pname = "cloudfoundry-cli";
-  version = "6.51.0";
+  version = "7.0.1";
 
   goPackagePath = "code.cloudfoundry.org/cli";
 
@@ -12,7 +12,14 @@ buildGoPackage rec {
     owner = "cloudfoundry";
     repo = "cli";
     rev = "v${version}";
-    sha256 = "189cqng7y12knqm4n1bfajbc2lx027rwb44wddmj5iya27i7fv8f";
+    sha256 = "0jh4x7xlijp1naak5qyc256zkzlrczl6g4iz94s8wx2zj7np0q5l";
+  };
+
+  # upstream have helpfully moved the bash completion script to a separate
+  # repo which receives no releases or even tags
+  bashCompletionScript = fetchurl {
+    url = "https://raw.githubusercontent.com/cloudfoundry/cli-ci/6087781a0e195465a35c79c8e968ae708c6f6351/ci/installers/completion/cf7";
+    sha256 = "1vhg9jcgaxcvvb4pqnhkf27b3qivs4d3w232j0gbh9393m3qxrvy";
   };
 
   nativeBuildInputs = [ installShellFiles ];
@@ -35,7 +42,7 @@ buildGoPackage rec {
 
   installPhase = ''
     install -Dm555 out/cf "$out/bin/cf"
-    installShellCompletion --bash "$src/ci/installers/completion/cf"
+    installShellCompletion --bash $bashCompletionScript
   '';
 
   meta = with stdenv.lib; {
diff --git a/pkgs/development/tools/database/dbmate/default.nix b/pkgs/development/tools/database/dbmate/default.nix
index d2e2638a703..4858b84abfa 100644
--- a/pkgs/development/tools/database/dbmate/default.nix
+++ b/pkgs/development/tools/database/dbmate/default.nix
@@ -2,16 +2,16 @@
 
 buildGoModule rec {
   pname = "dbmate";
-  version = "1.9.1";
+  version = "1.10.0";
 
   src = fetchFromGitHub {
     owner = "amacneil";
     repo = "dbmate";
     rev = "v${version}";
-    sha256 = "0s7ymw1r1k1s8kwyg6nxpgak6kh9z3649a0axdfpjnm62v283shd";
+    sha256 = "09zb7r8f6m1w9ax9ayaxjzwmqcgx5f6x4lclfi1wdn6f6qaans4w";
   };
 
-  vendorSha256 = "00vp925vf9clk5bkw5fvj34id4v548rlssizh52z9psvdizj8q5p";
+  vendorSha256 = "012kgdvw7hj3m40v3nnpg916n02nxv19zid07h8g4qwprzg49iq2";
 
   doCheck = false;
 
diff --git a/pkgs/development/tools/icestorm/default.nix b/pkgs/development/tools/icestorm/default.nix
index 091a4638433..15ca059a880 100644
--- a/pkgs/development/tools/icestorm/default.nix
+++ b/pkgs/development/tools/icestorm/default.nix
@@ -11,7 +11,7 @@
 
 stdenv.mkDerivation rec {
   pname = "icestorm";
-  version = "2020.07.08";
+  version = "2020.08.19";
 
   passthru = rec {
     pythonPkg = if usePyPy then pypy3 else python3;
@@ -19,10 +19,10 @@ stdenv.mkDerivation rec {
   };
 
   src = fetchFromGitHub {
-    owner  = "cliffordwolf";
+    owner  = "YosysHQ";
     repo   = "icestorm";
-    rev    = "d12308775684cf43ab923227235b4ad43060015e";
-    sha256 = "18ykv6np8sp7rb7c1cm3ha3qnj280gpkyn476faahb15jh0nbjmw";
+    rev    = "da52117ccd5b4147f64dc7345357ec5439cd7543";
+    sha256 = "072bl3vmvb06ry0ci3b1sfjpm3iigb874khzja4azcai969ybp4k";
   };
 
   nativeBuildInputs = [ pkgconfig ];
diff --git a/pkgs/development/tools/misc/itm-tools/cargo-lock.patch b/pkgs/development/tools/misc/itm-tools/cargo-lock.patch
new file mode 100644
index 00000000000..1559510cd9f
--- /dev/null
+++ b/pkgs/development/tools/misc/itm-tools/cargo-lock.patch
@@ -0,0 +1,321 @@
+diff --git a/Cargo.lock b/Cargo.lock
+new file mode 100644
+index 0000000..d9d39e5
+--- /dev/null
++++ b/Cargo.lock
+@@ -0,0 +1,315 @@
++# This file is automatically @generated by Cargo.
++# It is not intended for manual editing.
++[[package]]
++name = "addr2line"
++version = "0.12.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "602d785912f476e480434627e8732e6766b760c045bbf897d9dfaa9f4fbd399c"
++dependencies = [
++ "gimli",
++]
++
++[[package]]
++name = "adler32"
++version = "1.1.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "567b077b825e468cc974f0020d4082ee6e03132512f207ef1a02fd5d00d1f32d"
++
++[[package]]
++name = "ansi_term"
++version = "0.11.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "ee49baf6cb617b853aa8d93bf420db2383fab46d314482ca2803b40d5fde979b"
++dependencies = [
++ "winapi",
++]
++
++[[package]]
++name = "atty"
++version = "0.2.14"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "d9b39be18770d11421cdb1b9947a45dd3f37e93092cbf377614828a319d5fee8"
++dependencies = [
++ "hermit-abi",
++ "libc",
++ "winapi",
++]
++
++[[package]]
++name = "backtrace"
++version = "0.3.49"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "05100821de9e028f12ae3d189176b41ee198341eb8f369956407fea2f5cc666c"
++dependencies = [
++ "addr2line",
++ "cfg-if",
++ "libc",
++ "miniz_oxide",
++ "object",
++ "rustc-demangle",
++]
++
++[[package]]
++name = "bitflags"
++version = "1.2.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "cf1de2fe8c75bc145a2f577add951f8134889b4795d47466a54a5c846d691693"
++
++[[package]]
++name = "byteorder"
++version = "1.3.4"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "08c48aae112d48ed9f069b33538ea9e3e90aa263cfa3d1c24309612b1f7472de"
++
++[[package]]
++name = "cfg-if"
++version = "0.1.10"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "4785bdd1c96b2a846b2bd7cc02e86b6b3dbf14e7e53446c4f54c92a361040822"
++
++[[package]]
++name = "clap"
++version = "2.33.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "bdfa80d47f954d53a35a64987ca1422f495b8d6483c0fe9f7117b36c2a792129"
++dependencies = [
++ "ansi_term",
++ "atty",
++ "bitflags",
++ "strsim",
++ "textwrap",
++ "unicode-width",
++ "vec_map",
++]
++
++[[package]]
++name = "either"
++version = "1.5.3"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "bb1f6b1ce1c140482ea30ddd3335fc0024ac7ee112895426e0a629a6c20adfe3"
++
++[[package]]
++name = "exitfailure"
++version = "0.5.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "2ff5bd832af37f366c6c194d813a11cd90ac484f124f079294f28e357ae40515"
++dependencies = [
++ "failure",
++]
++
++[[package]]
++name = "failure"
++version = "0.1.8"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "d32e9bd16cc02eae7db7ef620b392808b89f6a5e16bb3497d159c6b92a0f4f86"
++dependencies = [
++ "backtrace",
++ "failure_derive",
++]
++
++[[package]]
++name = "failure_derive"
++version = "0.1.8"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "aa4da3c766cd7a0db8242e326e9e4e081edd567072893ed320008189715366a4"
++dependencies = [
++ "proc-macro2",
++ "quote",
++ "syn",
++ "synstructure",
++]
++
++[[package]]
++name = "gimli"
++version = "0.21.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "bcc8e0c9bce37868955864dbecd2b1ab2bdf967e6f28066d65aaac620444b65c"
++
++[[package]]
++name = "hermit-abi"
++version = "0.1.15"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "3deed196b6e7f9e44a2ae8d94225d80302d81208b1bb673fd21fe634645c85a9"
++dependencies = [
++ "libc",
++]
++
++[[package]]
++name = "itm"
++version = "0.4.0"
++source = "git+https://github.com/rust-embedded/itm#5dd476d03de0738062a876fd3845900ab04833a4"
++dependencies = [
++ "byteorder",
++ "either",
++ "thiserror",
++]
++
++[[package]]
++name = "itm-tools"
++version = "0.1.0"
++dependencies = [
++ "clap",
++ "exitfailure",
++ "failure",
++ "itm",
++ "rustc-demangle",
++ "xmas-elf",
++]
++
++[[package]]
++name = "libc"
++version = "0.2.71"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "9457b06509d27052635f90d6466700c65095fdf75409b3fbdd903e988b886f49"
++
++[[package]]
++name = "miniz_oxide"
++version = "0.3.7"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "791daaae1ed6889560f8c4359194f56648355540573244a5448a83ba1ecc7435"
++dependencies = [
++ "adler32",
++]
++
++[[package]]
++name = "object"
++version = "0.20.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "1ab52be62400ca80aa00285d25253d7f7c437b7375c4de678f5405d3afe82ca5"
++
++[[package]]
++name = "proc-macro2"
++version = "1.0.18"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "beae6331a816b1f65d04c45b078fd8e6c93e8071771f41b8163255bbd8d7c8fa"
++dependencies = [
++ "unicode-xid",
++]
++
++[[package]]
++name = "quote"
++version = "1.0.7"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "aa563d17ecb180e500da1cfd2b028310ac758de548efdd203e18f283af693f37"
++dependencies = [
++ "proc-macro2",
++]
++
++[[package]]
++name = "rustc-demangle"
++version = "0.1.16"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "4c691c0e608126e00913e33f0ccf3727d5fc84573623b8d65b2df340b5201783"
++
++[[package]]
++name = "strsim"
++version = "0.8.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "8ea5119cdb4c55b55d432abb513a0429384878c15dde60cc77b1c99de1a95a6a"
++
++[[package]]
++name = "syn"
++version = "1.0.33"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "e8d5d96e8cbb005d6959f119f773bfaebb5684296108fb32600c00cde305b2cd"
++dependencies = [
++ "proc-macro2",
++ "quote",
++ "unicode-xid",
++]
++
++[[package]]
++name = "synstructure"
++version = "0.12.4"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "b834f2d66f734cb897113e34aaff2f1ab4719ca946f9a7358dba8f8064148701"
++dependencies = [
++ "proc-macro2",
++ "quote",
++ "syn",
++ "unicode-xid",
++]
++
++[[package]]
++name = "textwrap"
++version = "0.11.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "d326610f408c7a4eb6f51c37c330e496b08506c9457c9d34287ecc38809fb060"
++dependencies = [
++ "unicode-width",
++]
++
++[[package]]
++name = "thiserror"
++version = "1.0.20"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "7dfdd070ccd8ccb78f4ad66bf1982dc37f620ef696c6b5028fe2ed83dd3d0d08"
++dependencies = [
++ "thiserror-impl",
++]
++
++[[package]]
++name = "thiserror-impl"
++version = "1.0.20"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "bd80fc12f73063ac132ac92aceea36734f04a1d93c1240c6944e23a3b8841793"
++dependencies = [
++ "proc-macro2",
++ "quote",
++ "syn",
++]
++
++[[package]]
++name = "unicode-width"
++version = "0.1.8"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "9337591893a19b88d8d87f2cec1e73fad5cdfd10e5a6f349f498ad6ea2ffb1e3"
++
++[[package]]
++name = "unicode-xid"
++version = "0.2.1"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "f7fe0bb3479651439c9112f72b6c505038574c9fbb575ed1bf3b797fa39dd564"
++
++[[package]]
++name = "vec_map"
++version = "0.8.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "f1bddf1187be692e79c5ffeab891132dfb0f236ed36a43c7ed39f1165ee20191"
++
++[[package]]
++name = "winapi"
++version = "0.3.9"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "5c839a674fcd7a98952e593242ea400abe93992746761e38641405d28b00f419"
++dependencies = [
++ "winapi-i686-pc-windows-gnu",
++ "winapi-x86_64-pc-windows-gnu",
++]
++
++[[package]]
++name = "winapi-i686-pc-windows-gnu"
++version = "0.4.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6"
++
++[[package]]
++name = "winapi-x86_64-pc-windows-gnu"
++version = "0.4.0"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f"
++
++[[package]]
++name = "xmas-elf"
++version = "0.6.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "22678df5df766e8d1e5d609da69f0c3132d794edf6ab5e75e7abcd2270d4cf58"
++dependencies = [
++ "zero",
++]
++
++[[package]]
++name = "zero"
++version = "0.1.2"
++source = "registry+https://github.com/rust-lang/crates.io-index"
++checksum = "5f1bc8a6b2005884962297587045002d8cfb8dcec9db332f4ca216ddc5de82c5"
diff --git a/pkgs/development/tools/misc/itm-tools/default.nix b/pkgs/development/tools/misc/itm-tools/default.nix
new file mode 100644
index 00000000000..6fb25695111
--- /dev/null
+++ b/pkgs/development/tools/misc/itm-tools/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchFromGitHub, rustPlatform, pkg-config }:
+
+rustPlatform.buildRustPackage rec {
+  pname = "itm-tools";
+  version = "unstable-2019-11-15";
+
+  src = fetchFromGitHub {
+    owner = "japaric";
+    repo = pname;
+    rev = "e94155e44019d893ac8e6dab51cc282d344ab700";
+    sha256 = "19xkjym0i7y52cfhvis49c59nzvgw4906cd8bkz8ka38mbgfqgiy";
+  };
+
+  cargoPatches = [ ./cargo-lock.patch ];
+
+  cargoSha256 = "0rl2ph5igwjl7rwpwcf6afnxly5av7cd6va6wn82lxm606giyq75";
+
+  nativeBuildInputs = [ pkg-config ];
+
+  doCheck = false;
+
+  meta = with stdenv.lib; {
+    description = "Tools for analyzing ITM traces";
+    homepage = "https://github.com/japaric/itm-tools";
+    license = with licenses; [ asl20 mit ];
+    maintainers = with maintainers; [ hh sb0 ];
+  };
+}
\ No newline at end of file
diff --git a/pkgs/development/tools/ocaml/dune/2.nix b/pkgs/development/tools/ocaml/dune/2.nix
index d785302ebb5..eac705294f3 100644
--- a/pkgs/development/tools/ocaml/dune/2.nix
+++ b/pkgs/development/tools/ocaml/dune/2.nix
@@ -1,16 +1,16 @@
 { stdenv, fetchurl, ocaml, findlib }:
 
-if stdenv.lib.versionOlder ocaml.version "4.07"
+if stdenv.lib.versionOlder ocaml.version "4.08"
 then throw "dune is not available for OCaml ${ocaml.version}"
 else
 
 stdenv.mkDerivation rec {
   pname = "dune";
-  version = "2.6.2";
+  version = "2.7.0";
 
   src = fetchurl {
     url = "https://github.com/ocaml/dune/releases/download/${version}/dune-${version}.tbz";
-    sha256 = "1sc8ax198z42vhc3l6i04kknm9g44whifjivs19qgi3sybrw2vjg";
+    sha256 = "058wiyncczbmlfxj3cnwn5n68wkmbaf4mgjm2bkp2hffpn2wl5xl";
   };
 
   buildInputs = [ ocaml findlib ];
diff --git a/pkgs/development/tools/rust/cargo-cache/default.nix b/pkgs/development/tools/rust/cargo-cache/default.nix
new file mode 100644
index 00000000000..0f3571045d6
--- /dev/null
+++ b/pkgs/development/tools/rust/cargo-cache/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchFromGitHub, rustPlatform, libiconv, Security }:
+
+rustPlatform.buildRustPackage rec {
+  pname = "cargo-cache";
+  version = "0.5.1";
+
+  src = fetchFromGitHub {
+    owner = "matthiaskrgr";
+    repo = pname;
+    rev = version;
+    sha256 = "02d593w1x8160p4m3jwm1dyvv383cy7njijlcaw49jczxv5isqbi";
+  };
+
+  cargoSha256 = "150ifd7gq6csrasqw91z4nsaj6w7kf69j0w6wydr3z7bdahmlgqw";
+
+  buildInputs = stdenv.lib.optionals stdenv.isDarwin [ libiconv Security ];
+
+  checkFlagsArray = [ "offline_tests" ];
+
+  meta = with stdenv.lib; {
+    description = "Manage cargo cache (\${CARGO_HOME}, ~/.cargo/), print sizes of dirs and remove dirs selectively";
+    homepage = "https://github.com/matthiaskrgr/cargo-cache";
+    license = with licenses; [ asl20 /* or */ mit ];
+    maintainers = with maintainers; [ filalex77 ];
+  };
+}
diff --git a/pkgs/development/tools/rust/cargo-fuzz/default.nix b/pkgs/development/tools/rust/cargo-fuzz/default.nix
index ecdd2409abd..14c849ac0af 100644
--- a/pkgs/development/tools/rust/cargo-fuzz/default.nix
+++ b/pkgs/development/tools/rust/cargo-fuzz/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, fetchurl, runCommand, rustPlatform }:
+{ stdenv, fetchFromGitHub, rustPlatform }:
 
 rustPlatform.buildRustPackage rec {
   pname = "cargo-fuzz";
@@ -13,6 +13,8 @@ rustPlatform.buildRustPackage rec {
 
   cargoSha256 = "0zxhak79f50m8nw95ny733mk4x2f7kyk6q9v4f7jr2rkcldhgrpr";
 
+  doCheck = false;
+
   meta = with stdenv.lib; {
     description = "Command line helpers for fuzzing";
     homepage = "https://github.com/rust-fuzz/cargo-fuzz";
diff --git a/pkgs/development/tools/rust/maturin/default.nix b/pkgs/development/tools/rust/maturin/default.nix
index 8ddbbcc8204..723ea94152c 100644
--- a/pkgs/development/tools/rust/maturin/default.nix
+++ b/pkgs/development/tools/rust/maturin/default.nix
@@ -5,16 +5,16 @@ let
   inherit (darwin.apple_sdk.frameworks) Security;
 in rustPlatform.buildRustPackage rec {
   name = "maturin-${version}";
-  version = "0.8.2";
+  version = "0.8.3";
 
   src = fetchFromGitHub {
     owner = "PyO3";
     repo = "maturin";
     rev = "v${version}";
-    sha256 = "1y6bxqbv7k8xvqjzgpf6n2n3yad4qxr2dwwlw8cb0knd7cfl2a2n";
+    sha256 = "08l5r7d75id6qzf8xhkjv4hkdr64cq4dbcmdjywmvf9szjbnr65z";
   };
 
-  cargoSha256 = "1f12k6n58ycv79bv416566fnsnsng8jk3f6fy5j78py1qgy30swm";
+  cargoSha256 = "1n0sxkhcdg2rbzqd7826pa7sxlnn0c2sc8l6lc98xw21vvqisc8n";
 
   nativeBuildInputs = [ pkgconfig ];
 
diff --git a/pkgs/development/tools/trellis/default.nix b/pkgs/development/tools/trellis/default.nix
index 6fc18fabe7b..21f14adc2f7 100644
--- a/pkgs/development/tools/trellis/default.nix
+++ b/pkgs/development/tools/trellis/default.nix
@@ -8,18 +8,18 @@ let
 in
 stdenv.mkDerivation rec {
   pname = "trellis";
-  version = "2020.06.29";
+  version = "2020.07.27";
 
   # git describe --tags
   realVersion = with stdenv.lib; with builtins;
-    "1.0-176-g${substring 0 7 (elemAt srcs 0).rev}";
+    "1.0-182-g${substring 0 7 (elemAt srcs 0).rev}";
 
   srcs = [
     (fetchFromGitHub {
        owner  = "SymbiFlow";
        repo   = "prjtrellis";
-       rev    = "f93243b000c52b755c70829768d2ae6bcf7bb91a";
-       sha256 = "0f7xv99bxmidk7byahc821yzy8mln29gknz3w239i9xbwxzc6wc4";
+       rev    = "8c0a6382e11b160ed88d17af8493c12a897617ed";
+       sha256 = "1g0ppjfw8dq5cg5kl2p1p87grb0i88apaim4f5b6wj4sfqz8iln8";
        name   = "trellis";
      })