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| author | Alex Branham <alex.branham@gmail.com> | 2019-08-06 08:49:39 -0500 |
|---|---|---|
| committer | Alex Branham <alex.branham@gmail.com> | 2019-08-06 08:49:39 -0500 |
| commit | eab786451f6a5f6af445dc2751f3fbeb820d3624 (patch) | |
| tree | 72dc85103a0f24c4532e357eeb843a2193aca884 /pkgs/development/r-modules/bioc-packages.nix | |
| parent | f6b4c024cdb201ce0209af29a4c90b55384b2f72 (diff) | |
| download | nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar.gz nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar.bz2 nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar.lz nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar.xz nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.tar.zst nixpkgs-eab786451f6a5f6af445dc2751f3fbeb820d3624.zip | |
R: Update CRAN and bioconductor packages
Diffstat (limited to 'pkgs/development/r-modules/bioc-packages.nix')
| -rw-r--r-- | pkgs/development/r-modules/bioc-packages.nix | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 82727234124..03a30aad499 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -943,7 +943,7 @@ in with self; { chipenrich = derive2 { name="chipenrich"; version="2.6.1"; sha256="0nm55lfac405spccl9f19p5ij8mdaj6lm7qmaf4xqagsaf5x0pa9"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; chipseq = derive2 { name="chipseq"; version="1.32.0"; sha256="1pp1rm5fs3hlar5x4dl3a3b4gara7qwf81dbvka6r1n78hrf9x1b"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; chopsticks = derive2 { name="chopsticks"; version="1.48.0"; sha256="0r52z0hjaxinw11jzg8cyhdpg2g1027vd5aiijwi6bmipdzw4sfk"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="2.0.1"; sha256="1bn5s1r927ifhwqifws0wgs7v15fk8922kbm8qdkg5zaqibj5qx7"; depends=[Biobase changepoint cluster DPpackage ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; + chroGPS = derive2 { name="chroGPS"; version="2.0.1"; sha256="1bn5s1r927ifhwqifws0wgs7v15fk8922kbm8qdkg5zaqibj5qx7"; depends=[Biobase changepoint cluster ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; chromDraw = derive2 { name="chromDraw"; version="2.12.0"; sha256="0qqam9vklg2cwsvcp9fm3l3c4lmjzf2lnxrv5dci16f8q55z88cl"; depends=[GenomicRanges Rcpp]; }; chromPlot = derive2 { name="chromPlot"; version="1.10.0"; sha256="15f7wmak0rp0bfzqsjmz6i8zk5g4axsgk7034qg4jw9hlp0nkd6v"; depends=[biomaRt GenomicRanges]; }; chromVAR = derive2 { name="chromVAR"; version="1.4.1"; sha256="16q9pmjlaqc7nvaxg9arfsrrnpcyzvz0gb5zq7l3g2jgjp4pfi30"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; |