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| author | Ben Darwin <bcdarwin@gmail.com> | 2020-03-09 22:20:35 -0400 |
|---|---|---|
| committer | Ben Darwin <bcdarwin@gmail.com> | 2020-05-25 21:12:17 -0400 |
| commit | 7f656f3ef604e76373f63b25404f34a98393f934 (patch) | |
| tree | badf0c9071b4df5b3309ca66693280ae06382a94 /pkgs/development/libraries/science/biology | |
| parent | a53b27829c8fda9915dd064368395c0eccfe5b7d (diff) | |
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bpp-popgen: init at 2.4.1
Diffstat (limited to 'pkgs/development/libraries/science/biology')
| -rw-r--r-- | pkgs/development/libraries/science/biology/bpp-popgen/default.nix | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/pkgs/development/libraries/science/biology/bpp-popgen/default.nix b/pkgs/development/libraries/science/biology/bpp-popgen/default.nix new file mode 100644 index 00000000000..af5d1d00d4d --- /dev/null +++ b/pkgs/development/libraries/science/biology/bpp-popgen/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, cmake, bpp-core, bpp-seq }: + +stdenv.mkDerivation rec { + pname = "bpp-popgen"; + + inherit (bpp-core) version; + + src = fetchFromGitHub { + owner = "BioPP"; + repo = pname; + rev = "v${version}"; + sha256 = "0bz0fhrq3dri6a0hvfc3zlvrns8mrzzlnicw5pyfa812gc1qwfvh"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ bpp-core bpp-seq ]; + + preCheck = '' + export LD_LIBRARY_PATH=$(pwd)/src + ''; + + postFixup = '' + substituteInPlace $out/lib/cmake/${pname}/${pname}-targets.cmake \ + --replace 'set(_IMPORT_PREFIX' '#set(_IMPORT_PREFIX' + ''; + # prevents cmake from exporting incorrect INTERFACE_INCLUDE_DIRECTORIES + # of form /nix/store/.../nix/store/.../include, + # probably due to relative vs absolute path issue + + doCheck = !stdenv.isDarwin; + + meta = bpp-core.meta // { + changelog = "https://github.com/BioPP/bpp-popgen/blob/master/ChangeLog"; + }; +} |