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authorPavol Rusnak <pavol@rusnak.io>2021-01-02 13:14:36 +0100
committerPavol Rusnak <pavol@rusnak.io>2021-01-02 18:53:31 +0100
commitcb0b77e2f5d4785feb98a067cffc369bfe2aa5ad (patch)
treec3bc7c5d2ddd675caa5cf1b4a65f17cf60bfbfe1 /pkgs/applications/science
parent7cd1e0bdd13884865bed01dc15b0220a6d8baa2a (diff)
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ViennaRNA: init at 2.4.17
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/molecular-dynamics/viennarna/default.nix37
1 files changed, 37 insertions, 0 deletions
diff --git a/pkgs/applications/science/molecular-dynamics/viennarna/default.nix b/pkgs/applications/science/molecular-dynamics/viennarna/default.nix
new file mode 100644
index 00000000000..a68feaea1ef
--- /dev/null
+++ b/pkgs/applications/science/molecular-dynamics/viennarna/default.nix
@@ -0,0 +1,37 @@
+{ stdenv
+, fetchurl
+, gsl
+, mpfr
+, perl
+, python3
+}:
+
+stdenv.mkDerivation rec {
+  pname = "ViennaRNA";
+  version = "2.4.17";
+
+  src = fetchurl {
+    url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/${pname}-${version}.tar.gz";
+    sha256 = "08f1h2a8fn1s2zwf1244smiydhgwxgcnzy6irpdlmpvwygv0irmi";
+  };
+
+  buildInputs = [
+    gsl
+    mpfr
+    perl
+    python3
+  ];
+
+  configureFlags = [
+    "--with-cluster"
+    "--with-kinwalker"
+  ];
+
+  meta = with stdenv.lib; {
+    description = "Prediction and comparison of RNA secondary structures";
+    homepage = "https://www.tbi.univie.ac.at/RNA/";
+    license = licenses.unfree;
+    maintainers = with maintainers; [ prusnak ];
+    platforms = platforms.unix;
+  };
+}