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authorgithub-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>2021-01-03 12:24:59 +0000
committerGitHub <noreply@github.com>2021-01-03 12:24:59 +0000
commit0649757570e8a37ba383c4f397f9f10e15d235bb (patch)
tree792e5de8d8dfea63df677cb0af1896b19e693998 /pkgs/applications/science
parentfb2311d4307f9873ccd38c7f080fbf1df8f17daa (diff)
parent93bf798c31e47d71f57ed9657901e060240ee423 (diff)
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Merge staging-next into staging
Diffstat (limited to 'pkgs/applications/science')
-rw-r--r--pkgs/applications/science/biology/bowtie/default.nix25
1 files changed, 25 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/bowtie/default.nix b/pkgs/applications/science/biology/bowtie/default.nix
new file mode 100644
index 00000000000..964eeddb461
--- /dev/null
+++ b/pkgs/applications/science/biology/bowtie/default.nix
@@ -0,0 +1,25 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  pname = "bowtie";
+  version = "1.3.0";
+
+  src = fetchFromGitHub {
+    owner = "BenLangmead";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0da2kzyfsn6xv8mlqsv2vv7k8g0c9d2vgqzq8yqk888yljdzcrjp";
+  };
+
+  buildInputs = [ zlib ];
+
+  installFlags = [ "prefix=$(out)" ];
+
+  meta = with stdenv.lib; {
+    description = "An ultrafast memory-efficient short read aligner";
+    license = licenses.artistic2;
+    homepage = "http://bowtie-bio.sf.net/bowtie";
+    maintainers = with maintainers; [ prusnak ];
+    platforms = platforms.all;
+  };
+}