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| author | Ryan Bernstein <ryanbernstein1@gmail.com> | 2017-10-21 16:20:41 -0400 |
|---|---|---|
| committer | Robin Gloster <mail@glob.in> | 2017-10-22 00:11:49 +0200 |
| commit | 941014ffff1bfe1e7e7379ba673755e336b9b418 (patch) | |
| tree | 79aebf9ae6e615fe808d9d0b23679153f69647c0 /pkgs/applications/science/biology | |
| parent | 7d8e1c358bc9c41851f1862c72820e96eba8d20b (diff) | |
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bowtie2: init at 2.3.3.1
Diffstat (limited to 'pkgs/applications/science/biology')
| -rw-r--r-- | pkgs/applications/science/biology/bowtie2/default.nix | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/bowtie2/default.nix b/pkgs/applications/science/biology/bowtie2/default.nix new file mode 100644 index 00000000000..05a85cafedf --- /dev/null +++ b/pkgs/applications/science/biology/bowtie2/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchFromGitHub, zlib, tbb }: + +stdenv.mkDerivation rec { + pname = "bowtie2"; + version = "2.3.3.1"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "BenLangmead"; + repo = pname; + rev = "v${version}"; + sha256 = "1pcyks76bnnkq6h0gqjw4fkdddjjnw7k5ibim7ajkbvfw58a99y0"; + }; + + buildInputs = [ zlib tbb ]; + + installFlags = [ "prefix=$(out)" ]; + + meta = with stdenv.lib; { + description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences"; + license = licenses.gpl3; + homepage = http://bowtie-bio.sf.net/bowtie2; + maintainers = with maintainers; [ rybern ]; + platforms = platforms.all; + }; +} |